HHsearch alignment for GI: 254781053 and conserved domain: TIGR03385
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=98.15 E-value=8.9e-06 Score=60.57 Aligned_cols=94 Identities=20% Similarity=0.300 Sum_probs=58.8
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf 19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r 4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM 83 (466)
Q Consensus 4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (466)
T Consensus 139 ~vvViGgG~IGlE~A~~l~~~G~~Vtvve~~~~il~------------------------------------~~~d-~~~ 181 (427)
T TIGR03385 139 RVVIIGGGYIGLEMVEALRERGKNVTLIHRSDKILN------------------------------------KLFD-EEM 181 (427)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCC------------------------------------CCCC-HHH
T ss_conf 899999639999999999976998999984683365------------------------------------5489-999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE--EECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 9999999998777778764004310110011--100222102357521123221000046766524
Q gi|254781053|r 84 MSYKKSIVESNTQGINFLLKKNKIITYHGSA--RIVSNNKILVKGSSSEETIEAKNIVIATGSEAS 147 (466)
Q Consensus 84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a--~~~~~~~v~V~~~~~~~~i~ad~iviATGs~p~ 147 (466)
T Consensus 182 -----------~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~~~l-~~g-~~i~~D~vi~a~G~~Pn 234 (427)
T TIGR03385 182 -----------NQIVEEELEKHEIELRLNEEVDSIIGEERVGVI-TSG-GVYQADMVILAIGVKPN 234 (427)
T ss_pred -----------HHHHHHHHHHCCCEEEECCEEEEEECCCCEEEE-ECC-CEEECCEEEECCCCCCC
T ss_conf -----------999999999759799979889999878878999-469-99972899988774676