HHsearch alignment for GI: 254781053 and conserved domain: pfam06039
>pfam06039 Mqo Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.
Probab=98.24 E-value=9.9e-07 Score=67.49 Aligned_cols=264 Identities=15% Similarity=0.187 Sum_probs=120.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
Q ss_conf 331999989866899999999879--939999379971502513667370989999999999998667558164775328
Q gi|254781053|r 2 VYDVAVVGGGPAGYACAIKAAQLK--NKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLD 79 (466)
Q Consensus 2 ~YDvvIIG~G~AG~~aA~~~~~~G--~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d 79 (466)
T Consensus 4 ~~DVvlIGgGImsatL~~~L~~l~p~~~I~l~Erl~~~A~eSS~-------~-wNNAgTgHa-a~cElNYTpe~~dg~i~ 74 (489)
T pfam06039 4 KVDVVLIGAGIMSATLGVLLKELEPNWSIEVFERLDGVAQESSN-------P-WNNAGTGHS-ALCELNYTPEGADGSID 74 (489)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHCC-------C-CCCCCCHHH-HHHHHCCCCCCCCCCCC
T ss_conf 10299999628899999999975998748999814752555078-------8-665521000-21341488765688442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECC--CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999999987777787640043101100111002--221023575211232210000467665244457665321
Q gi|254781053|r 80 LKKMMSYKKSIVESNTQGINFLLKKNKIITYHGSARIVS--NNKILVKGSSSEETIEAKNIVIATGSEASGLPGMSIDFD 157 (466)
Q Consensus 80 ~~~~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~--~~~v~V~~~~~~~~i~ad~iviATGs~p~~iP~~~~~~~ 157 (466)
T Consensus 75 i~KA~~IneqFe-~Srqfws~lv-~~g~l--~~p~~fI~~~Phmsfv~Ge~~v~fLrkRye~lk~--~-~lF~~Me~--- 144 (489)
T pfam06039 75 ISKAVKINEQFQ-ISRQFWAYLV-KEGVL--SNPKSFINPVPHMSFVWGEDNVAFLKKRYEALKQ--N-PLFEGMEY--- 144 (489)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHH-HCCCC--CCHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHC--C-CCCCCCEE---
T ss_conf 799999999999-9999999998-75898--9857850568815898776988999999998505--8-78677784---
Q ss_pred CEEEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 002453057411111-1333210123445433201322012201110000111221222211222222222-22223220
Q gi|254781053|r 158 EQVIVSSTGALSFSS-VPKNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILNGMDKEIAAHCLKIMSK-QGMNFQLN 235 (466)
Q Consensus 158 ~~~~~t~~~~~~l~~-~P~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~-~gV~i~~~ 235 (466)
T Consensus 145 ------seD~~~i~~w~P---Lv~~gR~~~e~vAat~~~~GTdVnFGa------------LT~~l~~~l~~~~~~~l~~~ 203 (489)
T pfam06039 145 ------SEDPEKIKEWVP---LMMEGRDPDEPIAATRIDEGTDVNFGA------------LTRQLFKYLQQKPNVELQYN 203 (489)
T ss_pred ------CCCHHHHHHHCC---CCCCCCCCCCCEEEEECCCCCCCCHHH------------HHHHHHHHHHHCCCEEEEEC
T ss_conf ------479899986448---003797978855799448874011899------------99999999851898289927
Q ss_pred HHHHHHHCCCCC-CEEEEEEE-CCCCCCCEEEEEEECCCCEEEECCCCCEEEEC--CCCCCCCCCCCCCCEEECCCC
Q ss_conf 023442014687-21699972-13321100000232045312103678400001--267642233377633302684
Q gi|254781053|r 236 SKVSSVKKVKGK-AQVVYRST-DDEPINIEADAVLVAAGRRPYTKGLGLEEIGI--NIDHRGCIEIGGQFQTSISTI 308 (466)
Q Consensus 236 ~~v~~i~~~~~~-~~v~~~~~-~g~~~~i~~D~vl~a~G~~Pn~~~l~Le~~gi--~~~~~G~I~vd~~~~Ts~p~I 308 (466)
T Consensus 204 ~eV~~i~r~~dg~w~v~v~~~~~~~~~~~~A~fVfvgAGG~s---L~LlQksgi~e~~~yggfPVsG~fl~~~np~~ 277 (489)
T pfam06039 204 HEVRDIKRNSDGTWTVTVKDLNTGDKRTIKAKFVFIGAGGGA---LPLLQKSGIPESKGYGGFPVSGQFLRCTNPEV 277 (489)
T ss_pred CEEEEEEECCCCCEEEEEEECCCCCEEEEEECEEEECCCHHH---HHHHHHCCCHHHCCCCCCCCCCEEEECCCHHH
T ss_conf 885345888999879999865789748998267998887577---89999819833236366775556885399899