HHsearch alignment for GI: 254781053 and conserved domain: pfam07992
>pfam07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=100.00 E-value=4.5e-40 Score=310.21 Aligned_cols=273 Identities=37% Similarity=0.572 Sum_probs=195.0
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf 19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r 4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM 83 (466)
Q Consensus 4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (466)
T Consensus 1 DVvIIGgG~AGl~aA~~l~~~g~~v~lid~~---~~~~~~~~~i~~~~~~~~~~~-----------------~~~~~~~~ 60 (277)
T pfam07992 1 DVVIIGGGPAGLAAAIYLARLGLKVALIEKE---GGTCYNRGCIPKKLLLEAAEV-----------------GKLDLRPL 60 (277)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECC---CCCEEEECCCCCCCCCCCCCH-----------------HHHHHHHH
T ss_conf 9999997699999999998499979999379---993575577477116454331-----------------45618999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEE-EEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC--CCCCCCCCCCEE
Q ss_conf 99999999987777787640043101100-111002221023575211232210000467665244--457665321002
Q gi|254781053|r 84 MSYKKSIVESNTQGINFLLKKNKIITYHG-SARIVSNNKILVKGSSSEETIEAKNIVIATGSEASG--LPGMSIDFDEQV 160 (466)
Q Consensus 84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g-~a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~p~~--iP~~~~~~~~~~ 160 (466)
T Consensus 61 ----------------~~~~~~~i~~~~~~~v~~i~~~~~~v~~~~g-~~~~~d~lviAtG~~~~~~~ipG~~--~~~~~ 121 (277)
T pfam07992 61 ----------------EQYKDEGIEVLLGTGVTAIDKAGKKVTLDDG-KELTYDKLVIATGARPRRPPIPGVE--LDGVF 121 (277)
T ss_pred ----------------HHHHHCCCEEEECCEEEEEECCCCEEEECCC-CEEECCEEEECCCCCCCCCCCCCCC--CCCCE
T ss_conf ----------------9998759799968779999789998998789-3998599999879986225778744--45623
Q ss_pred EEEECCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 45305741111113-33210123445433201322012201110000111221222211222222222222232200234
Q gi|254781053|r 161 IVSSTGALSFSSVP-KNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILNGMDKEIAAHCLKIMSKQGMNFQLNSKVS 239 (466)
Q Consensus 161 ~~t~~~~~~l~~~P-~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~ 239 (466)
T Consensus 122 ~~~~~~~~~~~~~~~~~v~VvGgG~~g~e~A~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (277)
T pfam07992 122 YLTSDDALALREKPKKRVVVVGGGYIGLELAAALAKLGAEVTVVERRDRLLARADDEIRAALLEKLEELGGVIVLLAKVE 201 (277)
T ss_pred ECCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEE
T ss_conf 23699998756174566999799875999999999729937999865723444478999999999997398999966788
Q ss_pred HHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEECCCCEEECCCCCCCC
Q ss_conf 42014687216999721332110000023204531210367840000126764223337763330268487024333543
Q gi|254781053|r 240 SVKKVKGKAQVVYRSTDDEPINIEADAVLVAAGRRPYTKGLGLEEIGINIDHRGCIEIGGQFQTSISTIYAIGDVVRGPM 319 (466)
Q Consensus 240 ~i~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G~~Pn~~~l~Le~~gi~~~~~G~I~vd~~~~Ts~p~IyA~GDv~g~~~ 319 (466)
T Consensus 202 ~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~g~~~~~~--~~~~~gl~~~~~G~I~vd~~~~Ts~~~VyA~GDva~g~~ 277 (277)
T pfam07992 202 VVVEVVEGVV--VKVVLEDGIEADADLVAIGRGPNPNTL--LLEKAGLELDERGYIVVDEYLRTSVPGIYAAGDVAEGRP 277 (277)
T ss_pred EEEECCEEEE--EECCCCEEEEEEEEEEEEEEEECCCCC--HHHHCCCCCCCCCCEEECCCCEECCCCEEEEEECCCCCC
T ss_conf 9883003689--860565279970899999974158951--377779248899958679297409999999886889999