HHsearch alignment for GI: 254781054 and conserved domain: PRK08535
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional.
Probab=97.13 E-value=0.025 Score=35.30 Aligned_cols=128 Identities=19% Similarity=0.177 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHCCCCCE-EEECCCHHHHHHHHHHHHHHHCCCEEEEEEC-------HHHHHHHHHHCCCCCCCCCCC-
Q ss_conf 9999999999983899789-9887917899999999998732870489618-------899999987315786551008-
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMT-LGMGTGSTAKEFMILLADKIANGFRVQVIPS-------SRNTENFCKIHHIPLHSPEDV- 75 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmv-iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~t-------S~~t~~~a~~~gi~~~~l~~~- 75 (231)
T Consensus 105 ~a~~~i~~~g~~~I~~g~~ILThc~sg~~l~~i~~a~~---~g~~~~V~v~EtRP~~qGrlta~eL~~~GI~~tlI~Dsa 181 (316)
T PRK08535 105 KALERIGEIGARRIKDGDVIMTHCNSSAALSVIKTAHE---QGKDIEVIATETRPRNQGHITAKELNEAGIPVTLIVDSA 181 (316)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH---CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCH
T ss_conf 99999999999866799879970685799999999998---799369999569954769999999997699769980426
Q ss_pred -----CEEEEEECCHHCCCCCCEEEECCCHHHHHHHHH-HHHHCCEEEEEEHHHCCCCCC-CCCCCEEE
Q ss_conf -----800798633000476605883165777778799-861022699962303513455-78872678
Q gi|254781054|r 76 -----SSVDLSIDGFDEIDSRLRLIKGYGGALLREKII-AHAASRFIVIGDESKRVDFLG-RGMLPIEI 137 (231)
Q Consensus 76 -----~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiv-a~~a~~~I~i~D~sK~v~~Lg-~~plPVEV 137 (231)
T Consensus 182 ~~~~m~~vd~VivGAd~i~~nG~v~NKiGTy~~A--l~A~~~~vPfyV~a~t~k~~~~~~~g~~i~iE~ 248 (316)
T PRK08535 182 VRYYMKDVDKVVVGADAITANGAVINKIGTSQIA--LAAHEARVPFMVAAETYKFSPKTLLGELVEIEE 248 (316)
T ss_pred HHHHHHCCCEEEEEEEEEECCCCEEECCCHHHHH--HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 8999630887987012897699778755538889--999974988899922566676778998010656