HHsearch alignment for GI: 254781054 and conserved domain: PRK09802

Probab=98.98  E-value=5.5e-09  Score=76.63  Aligned_cols=117  Identities=24%  Similarity=0.269  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH-CCCCCCC-----------
Q ss_conf             8999999999998389978998879178999999999987328704896188999999873-1578655-----------
Q gi|254781054|r    4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI-HHIPLHS-----------   71 (231)
Q Consensus         4 ~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~-~gi~~~~-----------   71 (231)
T Consensus        90 ~~~K~~IA~~Aa~lI~~gd~I~lD~GTT~~~la~~L~~----~~~ltVvTNsl~ia~~L~~~~~~~vil~GG~~~~~~~s  165 (269)
T PRK09802         90 TAMKRSVAKAAVELIQPGHRVILDSGTTTFEIARLMRK----HTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQS  165 (269)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHHCCCCEEEEECCEEECCCCC
T ss_conf             99999999999986899999997786799999973232----69859997879999999728996799748877067772


Q ss_pred             ---------CCCCCEEEEEECCHHCCCCCCE-EEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCC
Q ss_conf             ---------1008800798633000476605-883165777778799861022699962303513
Q gi|254781054|r   72 ---------PEDVSSVDLSIDGFDEIDSRLR-LIKGYGGALLREKIIAHAASRFIVIGDESKRVD  126 (231)
Q Consensus        72 ---------l~~~~~iDi~iDGaDevd~~l~-lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~  126 (231)
T Consensus       166 ~~G~~a~~~l~~-~~~d~aFlg~~gi~~~~G~t~~~~~ea~~kr~~-i~~a~~~illaD~sKf~~  228 (269)
T PRK09802        166 FYGDQAEQSLQN-YHFDMLFLGVDAIDLERGVSTHNEDEARLNRRM-CEVAERIIVVTDSSKFNR  228 (269)
T ss_pred             EECHHHHHHHHH-CCCCEEEECCCEECCCCCCCCCCHHHHHHHHHH-HHHCCCEEEEECHHHCCC
T ss_conf             667899999983-668999984766558997573999999999999-995597999986325288