HHsearch alignment for GI: 254781054 and conserved domain: PRK10906
>PRK10906 DNA-binding transcriptional repressor GlpR; Provisional.
Probab=99.01 E-value=4.2e-09 Score=77.35 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH-HCCCCCCCC----------
Q ss_conf 899999999999838997899887917899999999998732870489618899999987-315786551----------
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK-IHHIPLHSP---------- 72 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~-~~gi~~~~l---------- 72 (231)
T Consensus 75 ~~~K~~IA~~Aa~lI~~g~~I~lD~GTT~~~la~~L~~----~~~ltVvTnsl~ia~~L~~~~~~~vil~GG~~~~~~~~ 150 (252)
T PRK10906 75 TEEKERIARKVASQIPNGSTLFIDIGTTPEAVAHALLN----HSNLRIVTNNLNVANTLMAKEDFRIILAGGELRSRDGG 150 (252)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCC----CCCEEEEECCHHHHHHHHHCCCCEEEEECCEEECCCCC
T ss_conf 99999999999986899999998786379999853336----79869998989999999848996499858888578874
Q ss_pred -------C--CCCEEEEEECCHHCCCCCCEEEEC-CCHHHHHHHHHHHHHCCEEEEEEHHHCCC
Q ss_conf -------0--088007986330004766058831-65777778799861022699962303513
Q gi|254781054|r 73 -------E--DVSSVDLSIDGFDEIDSRLRLIKG-YGGALLREKIIAHAASRFIVIGDESKRVD 126 (231)
Q Consensus 73 -------~--~~~~iDi~iDGaDevd~~l~lIKG-gGgAl~rEKiva~~a~~~I~i~D~sK~v~ 126 (231)
T Consensus 151 ~~G~~a~~~l~~~~~d~afig~~gi~~~~g~t~~~~~ea~~kr~-mi~~a~~~illaDssKfg~ 213 (252)
T PRK10906 151 IIGEATLDFISQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRA-IIENSRHVMLVVDHSKFGR 213 (252)
T ss_pred EECHHHHHHHHHCCEEEEEEECCEECCCCCCCCCCHHHHHHHHH-HHHHCCCEEEEECCCCCCC
T ss_conf 30688999997066029996165126898733599999999999-9996196899987330388