HHsearch alignment for GI: 254781054 and conserved domain: pfam01008

>pfam01008 IF-2B Initiation factor 2 subunit family. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes, initiation factor 2B subunits 1 and 2 from archaebacteria and some proteins of unknown function from prokaryotes. Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. Members of this family have also been characterized as 5-methylthioribose- 1-phosphate isomerases, an enzyme of the methionine salvage pathway. The crystal structure of Ypr118w, a non-essential, low-copy number gene product from Saccharomyces cerevisiae, reveals a dimeric protein with two domains and a putative active site cleft.
Probab=97.21  E-value=0.016  Score=36.43  Aligned_cols=129  Identities=23%  Similarity=0.184  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHCCCCC-EEEECCCHHHHHHHHHHHHHHHCCCEEEEEE--C-----HHHHHHHHHHCCCCCCCCCC-
Q ss_conf             8999999999998389978-9988791789999999999873287048961--8-----89999998731578655100-
Q gi|254781054|r    4 LQMKRNAARRAIQYVVDGM-TLGMGTGSTAKEFMILLADKIANGFRVQVIP--S-----SRNTENFCKIHHIPLHSPED-   74 (231)
Q Consensus         4 ~~~K~~~a~~A~~~v~~gm-viGlGtGSTv~~~i~~L~~~~~~~~~i~~v~--t-----S~~t~~~a~~~gi~~~~l~~-   74 (231)
T Consensus        91 ~~a~~~Ia~~a~~~I~~g~~ILT~~~S~tv~~~l~~A~~---~gk~f~V~v~EsrP~~~G~~~a~~L~~~gI~~t~i~ds  167 (281)
T pfam01008        91 EEARRKIGAIAAELIKDGDTILTHCNSGTVLGVLRAAHK---EGKRFRVIVTESRPRLQGRLTAKELVQAGIPVTLITDS  167 (281)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEHH
T ss_conf             999999999999774899889975682899999999998---59907999966897401389999998579996896053


Q ss_pred             -----CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHH-HHHCCEEEEEEHHHCCCCCC-CCCCCEEE
Q ss_conf             -----88007986330004766058831657777787998-61022699962303513455-78872678
Q gi|254781054|r   75 -----VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA-HAASRFIVIGDESKRVDFLG-RGMLPIEI  137 (231)
Q Consensus        75 -----~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva-~~a~~~I~i~D~sK~v~~Lg-~~plPVEV  137 (231)
T Consensus       168 a~~~~m~~vd~VivGAd~v~~nG~v~nk~GT~~iA--~~Ak~~~vPv~V~a~~~Kf~~~~~~~~~~~~e~  235 (281)
T pfam01008       168 AVGYVMQEVDKVIVGADRILANGGIANKIGTYQLA--LLAKAHNVPFYVVAETYKFDPRFPLDEDIFIEE  235 (281)
T ss_pred             HHHHHHHHCCEEEECHHHHCCCCCEEECHHHHHHH--HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf             89998501888997554413799874412029999--998644997899866677587678877465766