HHsearch alignment of GI: 254781054 and MMDB domain: 2gnp_A_

>2gnp_A (A:) Transcriptional regulator; structural genomics, MCSG, APC84799, PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae TIGR4}

Probab=92.65  E-value=0.26  Score=28.51  Aligned_cols=41  Identities=15%  Similarity=0.261  Sum_probs=33.0

Q ss_pred             CHHHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHH
Q ss_conf             878999999999998----38997899887917899999999998
Q gi|254781054|r    2 DALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADK   42 (231)
Q Consensus         2 ~~~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~   42 (231)
                      |.+++.+.+|..|++    .++++++||+++|+|...+.++|...
T Consensus        35 ~~~~~~~~va~~aa~~l~~~~~~~~~igis~G~t~~~~~~~l~~~   79 (266)
T 2gnp_A           35 TPTILSERISQVAAGVLRNLIDDNXKIGFSWGKSLSNLVDLIHSK   79 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHHCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCC
T ss_conf             767899999999999999747899989982688899999971644