HHsearch alignment of GI: 254781054 and MMDB domain: 2pjm_A_

>2pjm_A (A:) Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii}
Probab=100.00  E-value=0  Score=385.21  Aligned_cols=221  Identities=36%  Similarity=0.569  Sum_probs=208.3

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEE
Q ss_conf             98789999999999983899789988791789999999999873-28704896188999999873157865510088007
Q gi|254781054|r    1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD   79 (231)
Q Consensus         1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iD   79 (231)
                      |++.+.|+++|++|+++|++||+||||||||+.+++++|+++.. .+.++.++++|.++...+...++++..++.. ++|
T Consensus         1 msn~e~K~~iA~~A~~~I~~g~~I~LgsGST~~~l~~~L~~~~~~~~~~v~~~gGs~~~~~~~~~g~~~~~~l~~~-~~D   79 (226)
T 2pjm_A            1 MSNEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELGNRIREEELTVFGIPTSFEAKMLAMQYEIPLVTLDEY-DVD   79 (226)
T ss_dssp             -CCHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHHHTCCCEEEESSHHHHHHHHHTTCCBCCTTTC-CCS
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCC-EEE
T ss_conf             9989999999999997479999999793799999999998765314773556477689999998668874346543-025


Q ss_pred             EEECCHHCCCCC-CEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf             986330004766-05883165777778799861022699962303513455-7887267872575899999986322148
Q gi|254781054|r   80 LSIDGFDEIDSR-LRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFG  157 (231)
Q Consensus        80 i~iDGaDevd~~-l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV~p~~~~~v~~~l~~~~~~~G  157 (231)
                      +||||||+||++ ++++||+|+|+++||+++++|+++|+++|+||++.+++ ++|.|+||.|+++..+.+++.+    .+
T Consensus        80 ~af~gad~id~~~~~~~~~~~~a~~~ek~i~~~s~~~iliaD~sK~~~~~~~~~~~~~eV~~~~~~~~~~~~~~----~~  155 (226)
T 2pjm_A           80 IAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSE----MG  155 (226)
T ss_dssp             EEEECCSEEETTTCCEECCTTSCHHHHHHHHHHSSEEEEEEEGGGEESSTTSSSCEEEEECGGGHHHHHHHHHH----TT
T ss_pred             EEEECCCHHCCCCHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH----HC
T ss_conf             89961212150210123135326899999998750199995567741006998984779724688999999998----39


Q ss_pred             CCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEECCCCCEEEEECCCCEEEE
Q ss_conf             98503772258863625788889982079868989999996279968664802476778999779984999
Q gi|254781054|r  158 LNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV  228 (231)
Q Consensus       158 ~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~~~~d~viv~~~dG~~~v  228 (231)
                      +.+.+|....+++|++|||||||+||+|+ +.||.+++.+|++||||||||||.+++ .++++++||++++
T Consensus       156 ~~~~lR~~~~~~~p~~Td~gn~i~D~~~~-~~~~~~~~~~l~~i~Gvve~g~f~~~~-~~~~~~~~g~~~~  224 (226)
T 2pjm_A          156 GEAVIRLGDRKRGPVITDNGNMIIDVFMN-IDDAIELEKEINNIPGVVENGIFTKVD-KVLVGTKKGVKTL  224 (226)
T ss_dssp             CEEEECBCSSSSSBCBCTTSCEEEEEECC-CSCHHHHHHHHHTSTTEEEESEECCCS-EEEEEETTEEEEE
T ss_pred             CCCEEEEECCCCCCEEEECCCEEEEECCC-CCCHHHHHHHHHCCCCEEEECCCCCCC-EEEEECCCEEEEE
T ss_conf             98448732257896381199779970789-899999999997799898589406778-9999739947997