HHsearch alignment of GI: 254781054 and MMDB domain: 3cdk_A_
>3cdk_A (A:) Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=96.05 E-value=0.037 Score=33.79 Aligned_cols=119 Identities=18% Similarity=0.083 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEECC--C-HHHHHHHHHHHHHHHCCCEEEEEE--------------------------CHH
Q ss_conf 99999999998389978998879--1-789999999999873287048961--------------------------889
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMTLGMGT--G-STAKEFMILLADKIANGFRVQVIP--------------------------SSR 56 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmviGlGt--G-STv~~~i~~L~~~~~~~~~i~~v~--------------------------tS~ 56 (231)
.|..-+.+|+++|+|||+|++|. + ..-..++++|+++-.+.+++...+ ++.
T Consensus 6 ~K~~s~~eA~~~I~~G~~i~~~gf~~~~~P~al~~aL~~~~~~~l~~~~~~~~~~~~~~~~l~~~g~v~~~~~~~~g~~~ 85 (241)
T 3cdk_A 6 KVLSSSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQGVKDLTVVSNNCGVDDWGLGLLLANKQIKKMIASYVGENK 85 (241)
T ss_dssp CBCSCHHHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHHTCCSEEEEESSCCCSSSTTHHHHHTTCEEEEEESBCCSCH
T ss_pred CEECCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCC
T ss_conf 33079999983199969999988056156999999999859998641205877774342435532734057614524773
Q ss_pred HH---------------------HHHHHHCCCCCC---C---------------------CCCCCEEEEEECCHHCCCCC
Q ss_conf 99---------------------999873157865---5---------------------10088007986330004766
Q gi|254781054|r 57 NT---------------------ENFCKIHHIPLH---S---------------------PEDVSSVDLSIDGFDEIDSR 91 (231)
Q Consensus 57 ~t---------------------~~~a~~~gi~~~---~---------------------l~~~~~iDi~iDGaDevd~~ 91 (231)
.. ...+...|.|-. . ....-++|+++=-+...|.+
T Consensus 86 ~~r~~~~~g~i~~~~~~~~~~~~~l~ag~~~~p~~~~~~~~~t~~~~~~p~~~~~~~~~~~~~~~~~Dvali~vs~~D~~ 165 (241)
T 3cdk_A 86 IFERQFLSGELEVELVPQGTLAERIRAGGAGIPGFYTATGVGTSIAEGKEHKTFGGRTYVLERGITGDVAIVKAWKADTM 165 (241)
T ss_dssp HHHHHHTTTSSEEEECCHHHHHHHHHHHHHTCCEEEESTTTTSGGGTTSCEEEETTEEEEEEECCCEEEEEEEEEEEETT
T ss_pred HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCEEEEECCCCCCEEEEEEEECCCC
T ss_conf 54444317861899857589999999987699945765303654455763201188359971476898899998667995
Q ss_pred CEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCC
Q ss_conf 058831657777787998610226999623035134
Q gi|254781054|r 92 LRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127 (231)
Q Consensus 92 l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~ 127 (231)
+|+.=|+-.-...+ .++.++++.|+-+++ .+++
T Consensus 166 G~~~~~~~~~~~~~-~~~~Aak~VIvevn~--~vp~ 198 (241)
T 3cdk_A 166 GNLIFRKTARNFNP-IAAMAGKITIAEAEE--IVEA 198 (241)
T ss_dssp CCEECCGGGCTTHH-HHHHHEEEEEEEEEE--EECT
T ss_pred EEEEEECCCCCCCH-HHHHCCCEEEEEEEE--ECCC
T ss_conf 43679846542408-898579969999998--7267