Query gi|254781054|ref|YP_003065467.1| ribose-5-phosphate isomerase A [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 231
No_of_seqs 127 out of 1329
Neff 5.5
Searched_HMMs 33803
Date Wed Jun 1 21:00:07 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781054.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1lk5_A D-ribose-5-phosphate i 100.0 0 0 401.3 25.2 226 1-231 1-229 (229)
2 >2pjm_A Ribose-5-phosphate iso 100.0 0 0 385.2 23.3 221 1-228 1-224 (226)
3 >3kwm_A Ribose-5-phosphate iso 100.0 0 0 362.8 21.4 217 1-229 7-224 (224)
4 >3hhe_A Ribose-5-phosphate iso 100.0 4.1E-30 1.2E-34 207.6 9.5 87 127-213 1-87 (87)
5 >2f8m_A Ribose 5-phosphate iso 99.9 3.7E-27 1.1E-31 189.1 7.8 82 130-213 2-84 (84)
6 >1xtz_A Ribose-5-phosphate iso 99.9 7.8E-27 2.3E-31 187.2 8.6 82 127-212 3-87 (88)
7 >1uj6_A Ribose 5-phosphate iso 99.9 7.9E-27 2.3E-31 187.1 8.6 80 128-213 1-80 (80)
8 >1m0s_A Ribose-5-phosphate iso 99.9 4E-25 1.2E-29 176.5 7.7 76 128-213 1-77 (77)
9 >1o8b_A Ribose 5-phosphate iso 99.9 2.2E-24 6.4E-29 172.0 7.6 74 130-213 1-74 (74)
10 >3hhe_A Ribose-5-phosphate iso 99.8 4.8E-18 1.4E-22 132.5 13.8 126 2-127 23-148 (168)
11 >1m0s_A Ribose-5-phosphate iso 99.8 1.2E-17 3.6E-22 130.0 13.6 125 1-127 1-125 (142)
12 >1o8b_A Ribose 5-phosphate iso 99.7 5.7E-18 1.7E-22 132.1 5.5 132 2-135 2-133 (145)
13 >1xtz_A Ribose-5-phosphate iso 99.7 7.8E-16 2.3E-20 118.8 11.9 126 4-129 19-153 (176)
14 >1uj6_A Ribose 5-phosphate iso 99.6 7.4E-15 2.2E-19 112.7 14.5 134 3-137 5-144 (147)
15 >2f8m_A Ribose 5-phosphate iso 99.6 4.1E-15 1.2E-19 114.3 12.4 127 3-129 9-138 (160)
16 >3ecs_A Translation initiation 99.1 1.2E-10 3.6E-15 86.5 7.0 190 6-211 2-208 (210)
17 >3cdk_B Succinyl-COA:3-ketoaci 98.3 1.5E-07 4.4E-12 67.3 0.9 113 4-125 5-152 (219)
18 >1ooy_A Succinyl-COA:3-ketoaci 98.0 1.7E-06 4.9E-11 60.8 1.8 112 4-124 12-158 (233)
19 >1poi_B Glutaconate coenzyme A 98.0 2.8E-06 8.4E-11 59.4 2.1 113 5-124 6-155 (260)
20 >1vb5_A Translation initiation 97.6 0.0033 9.8E-08 40.3 12.5 132 4-137 93-237 (276)
21 >1k6d_A Acetate COA-transferas 97.1 0.0038 1.1E-07 39.9 8.3 113 7-128 4-147 (171)
22 >1t9k_A Probable methylthiorib 96.7 0.033 9.8E-07 34.1 10.6 132 4-137 19-174 (234)
23 >3eh7_A 4-hydroxybutyrate COA- 96.4 0.0089 2.6E-07 37.6 6.2 88 3-94 5-135 (244)
24 >2oas_A ATOA, 4-hydroxybutyrat 96.2 0.011 3.3E-07 37.0 5.6 125 7-135 5-165 (181)
25 >3gk7_A 4-hydroxybutyrate COA- 96.1 0.016 4.8E-07 36.0 6.2 127 5-135 8-170 (187)
26 >3eh7_A 4-hydroxybutyrate COA- 96.1 0.016 4.8E-07 36.0 6.1 127 5-135 12-174 (190)
27 >3d3u_A 4-hydroxybutyrate COA- 96.1 0.022 6.5E-07 35.2 6.8 131 1-135 1-171 (187)
28 >3cdk_A Succinyl-COA:3-ketoaci 96.0 0.037 1.1E-06 33.8 7.7 119 6-127 6-198 (241)
29 >1t5o_A EIF2BD, translation in 95.8 0.13 4E-06 30.3 9.6 118 18-138 1-141 (208)
30 >1xr4_A Putative citrate lyase 95.7 0.17 5.1E-06 29.7 9.7 121 5-129 48-225 (309)
31 >1poi_A Glutaconate coenzyme A 95.6 0.042 1.2E-06 33.5 6.5 111 11-127 7-163 (189)
32 >2yvk_A Methylthioribose-1-pho 95.2 0.26 7.7E-06 28.6 10.1 132 5-139 158-314 (374)
33 >2nvv_A Acetyl-COA hydrolase/t 94.6 0.067 2E-06 32.2 5.1 112 7-122 18-176 (286)
34 >3gk7_A 4-hydroxybutyrate COA- 94.5 0.081 2.4E-06 31.7 5.4 90 5-94 6-134 (261)
35 >2oas_A ATOA, 4-hydroxybutyrat 94.2 0.1 3.1E-06 31.0 5.3 87 4-94 6-135 (255)
36 >2nvv_A Acetyl-COA hydrolase/t 94.0 0.029 8.6E-07 34.5 2.2 140 7-150 4-195 (220)
37 >2okg_A Central glycolytic gen 93.6 0.075 2.2E-06 31.9 3.7 69 4-72 36-119 (255)
38 >3d3u_A 4-hydroxybutyrate COA- 93.4 0.25 7.5E-06 28.6 6.1 87 4-94 6-135 (252)
39 >3kv1_A Transcriptional repres 93.1 0.15 4.4E-06 30.0 4.5 67 3-69 34-115 (267)
40 >2gnp_A Transcriptional regula 92.7 0.26 7.8E-06 28.5 5.3 41 2-42 35-79 (266)
41 >2g39_A Acetyl-COA hydrolase; 92.6 0.054 1.6E-06 32.8 1.7 144 4-149 11-199 (225)
42 >1xr4_A Putative citrate lyase 92.5 0.15 4.3E-06 30.1 3.8 107 12-127 25-147 (175)
43 >2a0u_A Initiation factor 2B; 92.3 0.88 2.6E-05 25.2 7.9 117 17-137 182-316 (383)
44 >2ri0_A Glucosamine-6-phosphat 92.2 0.17 5.1E-06 29.7 3.8 96 2-97 9-138 (234)
45 >1ooy_A Succinyl-COA:3-ketoaci 92.1 0.12 3.6E-06 30.6 3.0 44 7-50 3-49 (248)
46 >3efb_A Probable SOR-operon re 90.7 0.46 1.4E-05 27.0 4.8 96 3-98 39-176 (266)
47 >2w48_A Sorbitol operon regula 89.5 0.33 9.8E-06 27.9 3.3 96 3-98 34-171 (261)
48 >2r5f_A Transcriptional regula 87.9 0.86 2.6E-05 25.3 4.5 70 2-71 35-121 (264)
49 >2ahu_A Putative enzyme YDIF; 87.9 0.28 8.2E-06 28.4 1.9 47 6-52 13-66 (297)
50 >2g39_A Acetyl-COA hydrolase; 85.8 1.4 4.2E-05 23.9 4.7 110 16-129 27-189 (272)
51 >2hj0_A Putative citrate lyase 83.4 3.5 0.0001 21.5 9.5 115 5-123 10-177 (246)
52 >2o0m_A Transcriptional regula 82.9 1.2 3.5E-05 24.5 3.2 65 5-69 122-203 (345)
53 >1ujn_A Dehydroquinate synthas 77.9 5.1 0.00015 20.5 5.1 45 18-63 83-127 (160)
54 >2ko1_A CTR148A, GTP pyrophosp 74.4 5.9 0.00017 20.1 4.6 79 129-213 2-81 (88)
55 >3dmq_A RNA polymerase-associa 73.1 2.8 8.4E-05 22.1 2.7 64 10-73 12-82 (302)
56 >3gaz_A Alcohol dehydrogenase 72.8 7.3 0.00021 19.6 5.1 88 9-99 13-117 (179)
57 >1pl8_A Human sorbitol dehydro 71.8 7.6 0.00023 19.4 6.0 61 9-71 13-76 (172)
58 >2p8t_A Hypothetical protein P 71.2 0.29 8.7E-06 28.2 -2.6 37 7-47 16-59 (200)
59 >1iz0_A Quinone oxidoreductase 68.8 8.7 0.00026 19.1 4.5 90 8-99 16-117 (172)
60 >1y7p_A Hypothetical protein A 68.5 9 0.00027 19.0 5.0 75 129-207 1-79 (83)
61 >1y89_A DEVB protein; structur 64.4 9.4 0.00028 18.8 3.9 43 2-44 9-53 (238)
62 >2pbf_A Protein-L-isoaspartate 62.4 12 0.00035 18.3 4.4 49 16-64 76-127 (227)
63 >1zcz_A Bifunctional purine bi 62.2 1.4 4E-05 24.1 -0.7 80 9-88 21-115 (129)
64 >1e3j_A NADP(H)-dependent keto 61.9 12 0.00036 18.2 7.8 59 9-70 13-74 (173)
65 >1sg6_A Pentafunctional AROM p 57.9 12 0.00037 18.1 3.6 52 22-74 13-71 (181)
66 >2bkx_A Glucosamine-6-phosphat 57.7 12 0.00036 18.1 3.6 43 2-44 8-52 (242)
67 >2cfx_A HTH-type transcription 51.8 18 0.00052 17.2 4.6 64 132-210 13-76 (89)
68 >3eb9_A 6-phosphogluconolacton 49.2 19 0.00057 16.9 4.2 42 2-43 12-59 (266)
69 >2d8a_A PH0655, probable L-thr 49.1 19 0.00058 16.9 6.1 61 8-70 9-71 (169)
70 >2ahu_A Putative enzyme YDIF; 48.0 19 0.00056 17.0 3.2 142 6-163 17-178 (203)
71 >1l1q_A Adenine phosphoribosyl 46.2 21 0.00061 16.7 3.2 112 27-138 33-177 (186)
72 >2vef_A Dihydropteroate syntha 45.9 22 0.00065 16.6 6.3 63 7-71 32-110 (314)
73 >2zbc_A 83AA long hypothetical 45.6 22 0.00065 16.6 5.3 66 133-210 6-72 (83)
74 >3css_A 6-phosphogluconolacton 44.1 23 0.00069 16.4 3.4 43 2-44 13-61 (267)
75 >3ico_A 6PGL, 6-phosphoglucono 43.3 24 0.00071 16.3 5.2 44 2-45 31-80 (268)
76 >1uuf_A YAHK, zinc-type alcoho 43.2 24 0.00071 16.3 5.8 58 9-69 10-70 (143)
77 >3lhi_A Putative 6-phosphogluc 43.0 24 0.00072 16.3 3.2 42 2-43 10-57 (232)
78 >2nzc_A Hypothetical protein; 42.4 25 0.00073 16.2 4.4 65 141-209 16-80 (86)
79 >3e15_A Glucose-6-phosphate 1- 40.8 16 0.00048 17.4 2.0 43 2-44 34-84 (312)
80 >1xah_A Sadhqs, 3-dehydroquina 40.5 27 0.00079 16.1 3.7 36 21-61 11-46 (165)
81 >3fpc_A NADP-dependent alcohol 38.9 28 0.00083 15.9 5.8 74 9-85 10-100 (153)
82 >1vl1_A 6PGL, 6-phosphoglucono 38.8 19 0.00055 17.0 2.0 40 4-43 23-68 (232)
83 >1h2b_A Alcohol dehydrogenase; 37.5 30 0.00087 15.8 7.2 54 14-69 14-68 (143)
84 >2yxl_A PH0851 protein, 450AA 37.3 30 0.00088 15.8 3.9 50 17-70 4-60 (198)
85 >3jzd_A Iron-containing alcoho 35.9 31 0.00092 15.6 4.8 42 78-119 78-119 (161)
86 >2qrd_A SNF1-like protein kina 35.9 6.7 0.0002 19.8 -0.6 81 127-215 14-128 (137)
87 >2vn8_A Reticulon-4-interactin 35.8 31 0.00093 15.6 5.5 88 9-99 14-121 (172)
88 >2qlv_A Carbon catabolite dere 34.8 16 0.00048 17.4 1.2 56 127-190 10-95 (134)
89 >1ixk_A Methyltransferase; ope 34.3 33 0.00098 15.5 4.6 52 14-69 1-59 (204)
90 >2gru_A 2-deoxy-scyllo-inosose 34.0 34 0.00099 15.4 5.3 25 120-144 108-132 (173)
91 >1fs5_A Glucosamine-6-phosphat 33.8 34 0.001 15.4 4.0 43 3-45 9-58 (266)
92 >3ce9_A Glycerol dehydrogenase 33.5 34 0.001 15.4 4.0 58 62-119 57-118 (162)
93 >1qor_A Quinone oxidoreductase 33.3 34 0.001 15.4 5.6 50 17-68 1-51 (132)
94 >1ne7_A Glucosamine-6-phosphat 33.2 35 0.001 15.3 5.7 43 3-45 9-58 (289)
95 >2jsx_A Protein NAPD; TAT, pro 33.1 35 0.001 15.3 5.5 70 133-214 10-79 (95)
96 >1jq5_A Glycerol dehydrogenase 32.8 35 0.001 15.3 5.5 83 37-119 21-116 (163)
97 >2cyy_A Putative HTH-type tran 32.3 36 0.0011 15.3 6.1 65 133-209 14-78 (94)
98 >3by5_A Cobalamin biosynthesis 31.4 37 0.0011 15.2 3.2 57 17-73 6-71 (155)
99 >2e1c_A Putative HTH-type tran 31.3 37 0.0011 15.1 5.6 64 133-208 14-77 (94)
100 >2p1z_A Phosphoribosyltransfer 30.7 23 0.00069 16.4 1.5 109 28-136 44-169 (180)
101 >1wyz_A Putative S-adenosylmet 30.4 31 0.00093 15.6 2.1 101 23-139 7-119 (120)
102 >1i1g_A Transcriptional regula 29.9 39 0.0012 15.0 5.1 64 133-208 14-78 (87)
103 >1k1x_A 4-alpha-glucanotransfe 29.4 9.4 0.00028 18.8 -0.7 29 75-103 5-38 (69)
104 >1tx2_A DHPS, dihydropteroate 29.3 40 0.0012 14.9 5.8 63 7-71 62-140 (297)
105 >1v8b_A Adenosylhomocysteinase 28.8 41 0.0012 14.9 5.9 89 17-119 27-116 (168)
106 >3clh_A 3-dehydroquinate synth 28.3 42 0.0012 14.8 6.6 13 21-33 87-99 (160)
107 >1lql_A OSMC, osmotical induci 27.4 17 0.00051 17.2 0.3 21 75-100 46-66 (66)
108 >3eey_A Putative rRNA methylas 26.9 44 0.0013 14.7 5.0 58 6-67 8-72 (197)
109 >1p5d_X PMM, phosphomannomutas 26.9 44 0.0013 14.7 2.6 38 34-71 9-46 (84)
110 >2djw_A Probable transcription 26.7 45 0.0013 14.7 4.1 66 133-210 6-72 (92)
111 >2wns_A Orotate phosphoribosyl 26.2 46 0.0013 14.6 3.1 107 32-138 7-130 (133)
112 >3hn0_A Nitrate transport prot 25.9 46 0.0014 14.6 3.9 44 20-63 10-54 (126)
113 >3iv7_A Alcohol dehydrogenase 24.7 49 0.0014 14.4 5.4 31 89-119 88-118 (160)
114 >2id1_A Hypothetical protein; 24.6 36 0.0011 15.2 1.6 90 107-197 13-103 (130)
115 >1kq3_A Glycerol dehydrogenase 24.2 50 0.0015 14.4 3.5 31 89-119 75-105 (150)
116 >3juw_A Probable GNAT-family a 23.9 42 0.0012 14.8 1.7 27 54-87 10-36 (43)
117 >1vi6_A 30S ribosomal protein 23.9 51 0.0015 14.3 7.2 81 7-87 55-163 (208)
118 >3i5x_A ATP-dependent RNA heli 23.5 51 0.0015 14.3 7.0 115 12-126 100-239 (301)
119 >1jzt_A Hypothetical 27.5 kDa 23.4 52 0.0015 14.3 8.1 117 2-121 27-174 (246)
120 >1wqa_A Phospho-sugar mutase; 22.7 53 0.0016 14.2 3.1 40 32-71 5-44 (77)
121 >3k5w_A Carbohydrate kinase; 1 22.4 54 0.0016 14.1 8.7 91 1-92 1-109 (184)
122 >1ta9_A Glycerol dehydrogenase 21.9 55 0.0016 14.1 3.8 27 91-117 147-173 (219)
123 >1vlj_A NADH-dependent butanol 21.7 56 0.0017 14.1 5.4 82 59-141 65-152 (193)
124 >2yzk_A OPRT, oprtase, orotate 21.5 28 0.00082 15.9 0.4 114 25-138 10-139 (154)
125 >2o4u_X Dimeric dihydrodiol de 21.4 56 0.0017 14.0 4.0 62 23-84 4-73 (184)
126 >3e4r_A Nitrate transport prot 21.1 57 0.0017 14.0 5.3 45 20-64 21-67 (98)
127 >3bio_A Oxidoreductase, GFO/ID 20.8 58 0.0017 13.9 4.1 61 22-84 10-72 (158)
128 >3hh1_A Tetrapyrrole methylase 20.7 59 0.0017 13.9 2.4 101 18-140 3-116 (117)
129 >3ic5_A Putative saccharopine 20.5 59 0.0017 13.9 2.2 63 23-88 8-73 (101)
130 >2dq4_A L-threonine 3-dehydrog 20.4 59 0.0018 13.9 6.5 63 9-74 13-79 (171)
No 1
>>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} (A:)
Probab=100.00 E-value=0 Score=401.27 Aligned_cols=226 Identities=39% Similarity=0.629 Sum_probs=215.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHC--CCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf 987899999999999838997899887917899999999998732--870489618899999987315786551008800
Q gi|254781054|r 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN--GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78 (231)
Q Consensus 1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~--~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~i 78 (231)
|++.++|+.+|++|++||++||+||||||||+.+|+++|+++... ..+..++++|..+...+..+|++..++.+..++
T Consensus 1 m~~~~~K~~iA~~A~~~I~dg~~I~lgsGST~~~li~~L~~~~~~~~~t~~v~v~gg~~~~~~~~~~G~~~~~~~~~~~~ 80 (229)
T 1lk5_A 1 MNVEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAI 80 (229)
T ss_dssp CCHHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHHHTTCCBCCGGGCSCE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf 99899999999999964799999994825999999999998765255565088755689999999779945342335742
Q ss_pred EEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf 798633000476605883165777778799861022699962303513455-7887267872575899999986322148
Q gi|254781054|r 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFG 157 (231)
Q Consensus 79 Di~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV~p~~~~~v~~~l~~~~~~~G 157 (231)
|+||||||++|++++++||+|+++++||+++++|+++|+++|+||++.+++ +||+|+||.||+|..+.+.+.. .|
T Consensus 81 D~af~Gad~i~~~~gl~~~~~~~~~~ek~~~~~s~~~IilaD~sK~~~~~~~~~~~~~eV~~~~~~~~~~~~~~----~~ 156 (229)
T 1lk5_A 81 DVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELSI----FN 156 (229)
T ss_dssp EEEEECCSEECTTCCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSTTSSCCEEEEECGGGHHHHHHHGGG----GT
T ss_pred EEEECCCHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCEEHHCCCCCCCCEEECCHHHHHHHHHHHH----HC
T ss_conf 27850602206663389706078888999998443569997522100113777880558652789999999997----28
Q ss_pred CCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEECCCCCEEEEECCCCEEEEEEC
Q ss_conf 98503772258863625788889982079868989999996279968664802476778999779984999879
Q gi|254781054|r 158 LNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231 (231)
Q Consensus 158 ~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~~~~d~viv~~~dG~~~vl~k 231 (231)
..+.+|...++.+|++|||||+|+|++|+++.||.+++.+|++||||||||||.++++.+++|+++| +++++|
T Consensus 157 ~~~~~R~~~~~~g~~itd~Gn~i~D~~~~~~~~~~~~~~~l~~i~Gvve~g~f~~~~~~~~~~~~~~-~~~~~k 229 (229)
T 1lk5_A 157 AKAELRMGVNKDGPVITDNGNFIIDAKFPRIDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREG-VKKLER 229 (229)
T ss_dssp CEEEECBCSSSSSBCCCTTSCEEEEEECSCCSCHHHHHHHHHTSTTEEEESEECSCCCEEEEEETTE-EEEEEC
T ss_pred CCCEEEEEECCCCCEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECEECCCCCEEEEECCCE-EEEEEC
T ss_conf 9956987634899507369986996778997999999999878997997586578798999971990-799719
No 2
>>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} (A:)
Probab=100.00 E-value=0 Score=385.21 Aligned_cols=221 Identities=36% Similarity=0.569 Sum_probs=208.3
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEE
Q ss_conf 98789999999999983899789988791789999999999873-28704896188999999873157865510088007
Q gi|254781054|r 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79 (231)
Q Consensus 1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iD 79 (231)
|++.+.|+++|++|+++|++||+||||||||+.+++++|+++.. .+.++.++++|.++...+...++++..++.. ++|
T Consensus 1 msn~e~K~~iA~~A~~~I~~g~~I~LgsGST~~~l~~~L~~~~~~~~~~v~~~gGs~~~~~~~~~g~~~~~~l~~~-~~D 79 (226)
T 2pjm_A 1 MSNEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELGNRIREEELTVFGIPTSFEAKMLAMQYEIPLVTLDEY-DVD 79 (226)
T ss_dssp -CCHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHHHTCCCEEEESSHHHHHHHHHTTCCBCCTTTC-CCS
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCC-EEE
T ss_conf 9989999999999997479999999793799999999998765314773556477689999998668874346543-025
Q ss_pred EEECCHHCCCCC-CEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf 986330004766-05883165777778799861022699962303513455-7887267872575899999986322148
Q gi|254781054|r 80 LSIDGFDEIDSR-LRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFG 157 (231)
Q Consensus 80 i~iDGaDevd~~-l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV~p~~~~~v~~~l~~~~~~~G 157 (231)
+||||||+||++ ++++||+|+|+++||+++++|+++|+++|+||++.+++ ++|.|+||.|+++..+.+++.+ .+
T Consensus 80 ~af~gad~id~~~~~~~~~~~~a~~~ek~i~~~s~~~iliaD~sK~~~~~~~~~~~~~eV~~~~~~~~~~~~~~----~~ 155 (226)
T 2pjm_A 80 IAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSE----MG 155 (226)
T ss_dssp EEEECCSEEETTTCCEECCTTSCHHHHHHHHHHSSEEEEEEEGGGEESSTTSSSCEEEEECGGGHHHHHHHHHH----TT
T ss_pred EEEECCCHHCCCCHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH----HC
T ss_conf 89961212150210123135326899999998750199995567741006998984779724688999999998----39
Q ss_pred CCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEECCCCCEEEEECCCCEEEE
Q ss_conf 98503772258863625788889982079868989999996279968664802476778999779984999
Q gi|254781054|r 158 LNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228 (231)
Q Consensus 158 ~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~~~~d~viv~~~dG~~~v 228 (231)
+.+.+|....+++|++|||||||+||+|+ +.||.+++.+|++||||||||||.+++ .++++++||++++
T Consensus 156 ~~~~lR~~~~~~~p~~Td~gn~i~D~~~~-~~~~~~~~~~l~~i~Gvve~g~f~~~~-~~~~~~~~g~~~~ 224 (226)
T 2pjm_A 156 GEAVIRLGDRKRGPVITDNGNMIIDVFMN-IDDAIELEKEINNIPGVVENGIFTKVD-KVLVGTKKGVKTL 224 (226)
T ss_dssp CEEEECBCSSSSSBCBCTTSCEEEEEECC-CSCHHHHHHHHHTSTTEEEESEECCCS-EEEEEETTEEEEE
T ss_pred CCCEEEEECCCCCCEEEECCCEEEEECCC-CCCHHHHHHHHHCCCCEEEECCCCCCC-EEEEECCCEEEEE
T ss_conf 98448732257896381199779970789-899999999997799898589406778-9999739947997
No 3
>>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structural genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp} (A:)
Probab=100.00 E-value=0 Score=362.79 Aligned_cols=217 Identities=33% Similarity=0.427 Sum_probs=201.3
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 98789999999999983899789988791789999999999873287048961889999998731578655100880079
Q gi|254781054|r 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL 80 (231)
Q Consensus 1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi 80 (231)
|.+.+.|+++|++|++||++||+||||+|||+.+++++|+++ ..+.++++++|..+...+..+|++..++.+..++|+
T Consensus 7 ~~~~~~K~~iA~~A~~~I~~g~~I~lgsGST~~~l~~~L~~~--~~~~i~~v~gG~~~~~~~~~~G~~~~~~l~~~~~D~ 84 (224)
T 3kwm_A 7 NNQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVNY--RDKIKTVVSSSEDSTRKLKALGFDVVDLNYAGEIDL 84 (224)
T ss_dssp CCHHHHHHHHHHHHHTTCCSSEEEEECCSHHHHHHHHHGGGC--TTTEEEEEESCHHHHHHHHHTTCCBCCHHHHCSEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHC--CCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEE
T ss_conf 899999999999999755899999837779999999999960--567875860859999999975998567661782589
Q ss_pred EECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf 86330004766058831657777787998610226999623035134557887267872575899999986322148985
Q gi|254781054|r 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE 160 (231)
Q Consensus 81 ~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~ 160 (231)
||||||++|++++++||+|+++++||+++++|+++|+++|+||++.+++.+++|+|++|+.+..+.+.++.+ +...
T Consensus 85 af~Gad~i~~~~gl~~~~~~~~~~ek~~~~~a~~~iil~D~sK~~~~~~~~~~ple~i~~~itd~~~~~~~l----~~~~ 160 (224)
T 3kwm_A 85 YIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNTLGNFPLPIEVIPMARSYIARQIVKL----GGQP 160 (224)
T ss_dssp EEECCSEECTTSCEECCSSSCHHHHHHHHHTEEEEEEEEEGGGBCSSBCSSCEEEEECGGGHHHHHHHHHHT----TCEE
T ss_pred EEECCHHHCCCCCEEECCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH----CCCC
T ss_conf 997722118775688327167999999999621279996632210113898688998376899999999981----7983
Q ss_pred EEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEEC-CCCCEEEEECCCCEEEEE
Q ss_conf 037722588636257888899820798689899999962799686648024-767789997799849998
Q gi|254781054|r 161 ELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229 (231)
Q Consensus 161 ~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~-~~~d~viv~~~dG~~~vl 229 (231)
.. ..|++|||||+|+|++|++++||.+++.+|++||||||||||. ++++.+++|++||.++++
T Consensus 161 ~~------~~~~itd~gn~iiD~~~~~i~~p~~~~~~l~~i~GVve~g~F~~~~~~~v~~~~~~g~~~~~ 224 (224)
T 3kwm_A 161 VY------REQTITDNGNVILDVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMATKDSNIVVL 224 (224)
T ss_dssp EE------CTTCCCTTSCEEEEEESCCBSCHHHHHHHHHTSTTEEEESEECSSCCSEEEEECTTSCEEEC
T ss_pred EE------CCCEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECEECCCCCCEEEEEECCCCEEEC
T ss_conf 44------34406389987998058987999999999857999971483649999899998289828979
No 4
>>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, structural genomics; HET: 5RP; 2.30A {Bartonella henselae str} (A:148-234)
Probab=99.96 E-value=4.1e-30 Score=207.58 Aligned_cols=87 Identities=46% Similarity=0.845 Sum_probs=85.0
Q ss_pred CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 45578872678725758999999863221489850377225886362578888998207986898999999627996866
Q gi|254781054|r 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIE 206 (231)
Q Consensus 127 ~Lg~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe 206 (231)
+||+|||||||+||+|.++.++|+++++.+|+++++|++.+++|||+|||||||+||+|+++.||.+++.+|++||||||
T Consensus 1 ~LG~fplPVEV~p~~~~~v~~~l~~~~~~~g~~~~lR~~~~~~gp~iTDnGN~IiD~~f~~i~d~~~l~~~L~~i~GVVe 80 (87)
T 3hhe_A 1 TLGAFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGRILQPKLLSEALLAIPGVVE 80 (87)
T ss_dssp SSCSSCEEEEECSTTHHHHHHHHHHHHHHHTCCSCEEECEETTEECCCTTSCEEEEECCSCCSCHHHHHHHHHTSTTEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf 22554554343310089999999975521265874899417998617689998996768997999999999837999960
Q ss_pred CCEECCC
Q ss_conf 4802476
Q gi|254781054|r 207 HGLFINM 213 (231)
Q Consensus 207 ~GlF~~~ 213 (231)
||||.||
T Consensus 81 ~GlF~~m 87 (87)
T 3hhe_A 81 HGLFLGL 87 (87)
T ss_dssp ESEECSC
T ss_pred ECCCCCC
T ss_conf 4720687
No 5
>>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative; 2.09A {Plasmodium falciparum 3D7} (A:140-223)
Probab=99.94 E-value=3.7e-27 Score=189.15 Aligned_cols=82 Identities=35% Similarity=0.622 Sum_probs=76.1
Q ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCC-CCCCHHHHHHHHHCCCCEEECC
Q ss_conf 788726787257589999998632214898503772258863625788889982079-8689899999962799686648
Q gi|254781054|r 130 RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHG 208 (231)
Q Consensus 130 ~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~-~i~dp~~le~~L~~IpGVVe~G 208 (231)
.|||||||+||||..|.++|+++++..|+++++| .+++|||+|||||||+||+|+ .+.||.+++.+|++||||||||
T Consensus 2 ~fplPVEV~pf~~~~v~~~l~~l~~~~G~~~~lR--~~~~gp~iTDnGN~IiD~~f~~~i~dp~~l~~~L~~i~GVVe~G 79 (84)
T 2f8m_A 2 TGAVPIEILTFGYEKIIENLLKIYTLKGCTYKIR--KRNGEIFITDNKNYIVDFFFTEPIQDLLETCTRIKMTTGVVDHG 79 (84)
T ss_dssp SSCEEEEECSTTHHHHHHHHTTSTTTTTCEEEEC--EETTEECCCTTSCEEEEEECSSCCSSHHHHHHHHHTSTTEEEES
T ss_pred CCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEE--ECCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEC
T ss_conf 6871335523127999999999860579863678--64996428469988998348977689999999975799998037
Q ss_pred EECCC
Q ss_conf 02476
Q gi|254781054|r 209 LFINM 213 (231)
Q Consensus 209 lF~~~ 213 (231)
+|.||
T Consensus 80 lF~~m 84 (84)
T 2f8m_A 80 IFVNM 84 (84)
T ss_dssp EECSC
T ss_pred CCCCC
T ss_conf 00486
No 6
>>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae} (A:153-240)
Probab=99.94 E-value=7.8e-27 Score=187.16 Aligned_cols=82 Identities=35% Similarity=0.477 Sum_probs=75.7
Q ss_pred CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEE---CCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCC
Q ss_conf 4557887267872575899999986322148985037722---5886362578888998207986898999999627996
Q gi|254781054|r 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR---NGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPG 203 (231)
Q Consensus 127 ~Lg~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~---~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpG 203 (231)
++|+|||||||+||||.++.+.|++ +|+++.+|++. +++|||+|||||||+||+|+++.||.+++.+|++|||
T Consensus 3 ~~g~~plPVEV~pf~~~~v~~~l~~----~g~~~~lR~r~~~~~k~gp~iTDnGN~I~D~~f~~i~dp~~l~~~L~~i~G 78 (88)
T 1xtz_A 3 KNWRQGVPIEIVPSSYVRVKNDLLE----QLHAEKVDIRQGGSAKAGPVVTDNNNFIIDADFGEISDPRKLHREIKLLVG 78 (88)
T ss_dssp SSCCSCEEEEECGGGHHHHHHHHHH----TSCCSEEEECEETTTEEEECCCTTSCEEEEEECSSBSCHHHHHHHHHTSTT
T ss_pred CCCCCCCCEEECHHHHHHHHHHHHH----HHCCCCEEEEECCCCCCCCEECCCCCEEEECCCCCCCCHHHHHHHHHCCCC
T ss_conf 6678776545434369999999998----607986057415766678507159976998268987899999998707998
Q ss_pred EEECCEECC
Q ss_conf 866480247
Q gi|254781054|r 204 VIEHGLFIN 212 (231)
Q Consensus 204 VVe~GlF~~ 212 (231)
|||||||.|
T Consensus 79 VVe~GlF~n 87 (88)
T 1xtz_A 79 VVETGLFID 87 (88)
T ss_dssp EEEESEECS
T ss_pred EEEECCCCC
T ss_conf 995682168
No 7
>>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} (A:131-210)
Probab=99.94 E-value=7.9e-27 Score=187.13 Aligned_cols=80 Identities=45% Similarity=0.811 Sum_probs=74.0
Q ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEC
Q ss_conf 55788726787257589999998632214898503772258863625788889982079868989999996279968664
Q gi|254781054|r 128 LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEH 207 (231)
Q Consensus 128 Lg~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~ 207 (231)
||+|||||||+||+|.++.++|++ +|+++++|+ +++|||+|||||||+|++|+++.||.+++.+|++|||||||
T Consensus 1 LG~fplPVEV~p~~~~~v~~~l~~----lG~~~~lR~--~~~gp~vTDnGN~IiD~~~~~i~d~~~l~~~L~~i~GVVe~ 74 (80)
T 1uj6_A 1 LGRGPVPVEIVPFGYRATLKAIAD----LGGEPELRX--DGDEFYFTDGGHLIADCRFGPIGDPLGLHRALLEIPGVVET 74 (80)
T ss_dssp SCSSCEEEEECSTTHHHHHHHHHT----TTCCEEECE--ETTEECCCTTSCEEEEECCCSCSCHHHHHHHHHTSTTEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH----HCCCEEEEC--CCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 589867899852026999999997----289648941--79802894799889991289989999999998679999802
Q ss_pred CEECCC
Q ss_conf 802476
Q gi|254781054|r 208 GLFINM 213 (231)
Q Consensus 208 GlF~~~ 213 (231)
|+|.|.
T Consensus 75 GlF~n~ 80 (80)
T 1uj6_A 75 GLFVGX 80 (80)
T ss_dssp SEECSC
T ss_pred CCCCCC
T ss_conf 800587
No 8
>>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} (A:126-202)
Probab=99.92 E-value=4e-25 Score=176.54 Aligned_cols=76 Identities=33% Similarity=0.415 Sum_probs=71.2
Q ss_pred CC-CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 55-78872678725758999999863221489850377225886362578888998207986898999999627996866
Q gi|254781054|r 128 LG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIE 206 (231)
Q Consensus 128 Lg-~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe 206 (231)
|| +||+||||+||||.++.+.|++ +|+++++|+ ||+|||||||+||+|+++.||.+++.+|++||||||
T Consensus 1 Lg~~~piPvEV~P~a~~~v~~~l~~----lG~~~~lR~------p~iTDnGN~IlD~~f~~i~d~~~l~~~L~~i~GVVe 70 (77)
T 1m0s_A 1 LGSTFPLPVEVIPMARSQVGRKLAA----LGGSPEYRE------GVVTDNGNVILDVHNFSILNPVEIEKELNNVAGVVT 70 (77)
T ss_dssp TTSSSCEEEEECGGGHHHHHHHHHH----TTCEEEECT------TCCCTTSCEEEEEESCCCSCHHHHHHHHHTSTTEEE
T ss_pred CCCCCCEEEEEEHHHHHHHHHHHHH----CCCCCCCCC------CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEE
T ss_conf 4899977899816788999999998----289952378------737289997998238987999999999718998961
Q ss_pred CCEECCC
Q ss_conf 4802476
Q gi|254781054|r 207 HGLFINM 213 (231)
Q Consensus 207 ~GlF~~~ 213 (231)
||+|.|.
T Consensus 71 ~GlF~nr 77 (77)
T 1m0s_A 71 NGIFALR 77 (77)
T ss_dssp ESEECTT
T ss_pred ECEECCC
T ss_conf 3847799
No 9
>>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein structure initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} (A:128-201)
Probab=99.91 E-value=2.2e-24 Score=171.97 Aligned_cols=74 Identities=32% Similarity=0.427 Sum_probs=69.5
Q ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCE
Q ss_conf 78872678725758999999863221489850377225886362578888998207986898999999627996866480
Q gi|254781054|r 130 RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGL 209 (231)
Q Consensus 130 ~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~Gl 209 (231)
+|||||||+||||.++.+.|++ +|+++++|+ ||+|||||||+||+|+++.||.+++.+|++|||||||||
T Consensus 1 kfplPvEV~pf~~~~v~~~l~~----~g~~~~lR~------p~iTDnGN~IiD~~~~~i~d~~~l~~~L~~i~GVVE~Gl 70 (74)
T 1o8b_A 1 KFPLPVEVIPXARSAVARQLVK----LGGRPEYRQ------GVVTDNGNVILDVHGXEILDPIAXENAINAIPGVVTVGL 70 (74)
T ss_dssp SSCEEEEECGGGHHHHHHHHHH----TTCEEEECT------TCCCTTSCEEEEEESCCBSCHHHHHHHHHTSTTEEEESE
T ss_pred CCCEEEEECHHHHHHHHHHHHH----HCCCCCCCC------CCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECC
T ss_conf 9757689727689999999998----379843578------857589987999228987999999999717998983171
Q ss_pred ECCC
Q ss_conf 2476
Q gi|254781054|r 210 FINM 213 (231)
Q Consensus 210 F~~~ 213 (231)
|.|.
T Consensus 71 F~~~ 74 (74)
T 1o8b_A 71 FANR 74 (74)
T ss_dssp ECSS
T ss_pred CCCC
T ss_conf 0698
No 10
>>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, structural genomics; HET: 5RP; 2.30A {Bartonella henselae str} (A:1-147,A:235-255)
Probab=99.78 E-value=4.8e-18 Score=132.53 Aligned_cols=126 Identities=44% Similarity=0.754 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEE
Q ss_conf 87899999999999838997899887917899999999998732870489618899999987315786551008800798
Q gi|254781054|r 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi~ 81 (231)
+..+.|+.+|++|+++|++||+|.||+|||+.+++++|+++...+..+++++.|......+..+|.+..+..+.-++|++
T Consensus 23 ~~~~~K~~IA~~Aa~lI~dg~~I~ld~GST~~~la~~L~~~~~~~~~~~ivtgg~~~~~~~~~~G~~~~~~l~~~~~D~a 102 (168)
T 3hhe_A 23 NVQQLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANGLRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLD 102 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCTTEEEEECCSHHHHHHHHHHHHHHHTTCCEEEEESSHHHHHHHHHTTCCBCCTTTCCSBSEE
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCHHHCCCEEEE
T ss_conf 99999999999999757999999979747999999999998864773699967788999999779975531005754799
Q ss_pred ECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCC
Q ss_conf 6330004766058831657777787998610226999623035134
Q gi|254781054|r 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127 (231)
Q Consensus 82 iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~ 127 (231)
|.|||.|+++..+.+........+|.++.+|++.|+++|+||+...
T Consensus 103 fig~~gi~~~~Gl~~~~~~~a~~kk~~~~~a~~~illaDssKf~~~ 148 (168)
T 3hhe_A 103 IDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKA 148 (168)
T ss_dssp EECCSEECGGGCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSC
T ss_pred EECCCEECCCCCEEECCHHHHHHHHHHHHHCCEEEEEECCCCEEEC
T ss_conf 7226542467752206889972510887624006898651306508
No 11
>>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} (A:1-125,A:203-219)
Probab=99.77 E-value=1.2e-17 Score=130.03 Aligned_cols=125 Identities=40% Similarity=0.572 Sum_probs=115.9
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 98789999999999983899789988791789999999999873287048961889999998731578655100880079
Q gi|254781054|r 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL 80 (231)
Q Consensus 1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi 80 (231)
|++.+.|+.+|++|+++|++|++|.||+|||+.+++++|.++.. ..+++++.|...+..+...|.+..+.-..-++|+
T Consensus 1 mtn~~~K~~IA~~A~~lI~dg~~I~ld~GST~~~la~~L~~~~~--~~~tivtgG~~~~~~~~~~G~~a~~~l~~~~~D~ 78 (142)
T 1m0s_A 1 MNQLEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALGTIKD--KIQGAVAASKESEELLRKQGIEVFNANDVSSLDI 78 (142)
T ss_dssp CCHHHHHHHHHHHHGGGCCTTSEEEECCSHHHHHHHHHHHTTGG--GSCEEEESSHHHHHHHHHTTCCBCCGGGCSCEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCE
T ss_conf 99899999999999976799999996766999999999986341--6715783778999999977997012433665552
Q ss_pred EECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCC
Q ss_conf 86330004766058831657777787998610226999623035134
Q gi|254781054|r 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127 (231)
Q Consensus 81 ~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~ 127 (231)
+|.|||.+++++.+.+...+....+|.+..+|++.|+++|+||+..+
T Consensus 79 aFig~~gI~~~~g~~~~~~~ea~~kk~~i~~s~~~illaDssKf~~~ 125 (142)
T 1m0s_A 79 YVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDV 125 (142)
T ss_dssp EEECCSEECTTSCEECCTTSCHHHHHHHHHHEEEEEEEEEGGGBCSS
T ss_pred ECCCHHHHCCCCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHH
T ss_conf 03656653868688825819998989999834027999524402443
No 12
>>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein structure initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} (A:1-127,A:202-219)
Probab=99.72 E-value=5.7e-18 Score=132.08 Aligned_cols=132 Identities=38% Similarity=0.538 Sum_probs=120.1
Q ss_pred CHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEE
Q ss_conf 87899999999999838997899887917899999999998732870489618899999987315786551008800798
Q gi|254781054|r 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi~ 81 (231)
++.+.|+.+|++|+++|++|++|.||+|||+.+++++|+++ ....+++++.|......+..+|.+.......-++|++
T Consensus 2 tn~e~K~~IA~~Aa~~I~~gd~I~ld~GST~~~l~~~L~~~--~~~~it~vtgg~~~~~~~~~~G~~~~~~l~~~~~D~a 79 (145)
T 1o8b_A 2 TQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTX--KGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIY 79 (145)
T ss_dssp ---------------------CEEECCSCC-----------------CCEEESCCC------------CCGGGCSCEEEE
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH--HCCCEEEEECCHHHHHHHHHCCCCCCCHHHCCCCCEE
T ss_conf 98999999999999747999999968569999999999763--1786188748589999998705554563007875657
Q ss_pred ECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCE
Q ss_conf 633000476605883165777778799861022699962303513455788726
Q gi|254781054|r 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135 (231)
Q Consensus 82 iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~plPV 135 (231)
|.|||.++++..+.+...+....+|.+..+|+++|+++|++|+..++|.-.+..
T Consensus 80 F~g~~gi~~~~G~~~~~~~~a~~k~~~i~~A~~~illaDssKf~~~~~~~~~~~ 133 (145)
T 1o8b_A 80 VDGADEINGHXQXIKGGGAALTREKIIASVAEKFICIADASKQVDILGGADVAL 133 (145)
T ss_dssp EECCSEECTTSCEECCCCC-HHHHHHHHHHEEEEEEEEEGGGBCSSBTCCSEEE
T ss_pred EECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCEEE
T ss_conf 507202102143453260888999999985214699975314121058689999
No 13
>>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae} (A:1-152,A:241-264)
Probab=99.68 E-value=7.8e-16 Score=118.82 Aligned_cols=126 Identities=31% Similarity=0.460 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHH---HCCCCCEEEECCCHHHHHHHHHHHHHHHCC------CEEEEEECHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8999999999998---389978998879178999999999987328------7048961889999998731578655100
Q gi|254781054|r 4 LQMKRNAARRAIQ---YVVDGMTLGMGTGSTAKEFMILLADKIANG------FRVQVIPSSRNTENFCKIHHIPLHSPED 74 (231)
Q Consensus 4 ~~~K~~~a~~A~~---~v~~gmviGlGtGSTv~~~i~~L~~~~~~~------~~i~~v~tS~~t~~~a~~~gi~~~~l~~ 74 (231)
.+.|+.+|++|++ +|++|++|+||+|||+.+++++|+++.... .....++.+........-.|....+.-.
T Consensus 19 ~e~K~~IA~~Aae~~slI~~g~tIfld~GST~~~l~~~L~~~~~ltviTns~~vai~l~GG~~~~~~~~~~G~~a~~~l~ 98 (176)
T 1xtz_A 19 EDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPTGFQSRNLILDNKLQLGSIEQ 98 (176)
T ss_dssp CHHHHHHHHHHHHHHCCTTTCCEEEECCCSSTHHHHHHHHHHHTSTTTHHHHTTCEEEESSHHHHHHHHHTTCEECCTTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCCCEEECHHH
T ss_conf 99999999999984476899989996028999999999998752134531123047862459999999987955806243
Q ss_pred CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC
Q ss_conf 8800798633000476605883165777778799861022699962303513455
Q gi|254781054|r 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG 129 (231)
Q Consensus 75 ~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg 129 (231)
.-++|++|.|||.||++..+.+........+|.+...|++.|+++|++|+..++.
T Consensus 99 ~~~~D~afig~~gI~~~~g~~~~~~~~a~~kk~~i~~a~k~illaD~sKf~~~~~ 153 (176)
T 1xtz_A 99 YPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKHA 153 (176)
T ss_dssp CCSEEEEEECCSEECTTSCEECCTTSCHHHHHHHHTTEEEEEEEEEGGGBCSSSC
T ss_pred CCCEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHCEEEEECCCEEEEECC
T ss_conf 5741589731441366753442371778888999986205799961763665308
No 14
>>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} (A:1-130,A:211-227)
Probab=99.65 E-value=7.4e-15 Score=112.74 Aligned_cols=134 Identities=46% Similarity=0.621 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHC--CCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 7899999999999838997899887917899999999998732--87048961889999998731578655100880079
Q gi|254781054|r 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN--GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL 80 (231)
Q Consensus 3 ~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~--~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi 80 (231)
+.+.|+..|++|+++|++|++|.||+|||+.+++++|.++... -.++..++.+..........+..+..+... ++|+
T Consensus 5 ~~~eK~~IA~~A~~lI~~gd~Ifld~GST~~~la~~L~~~~~~~v~tn~~~igG~~~~~~~~~~g~~a~~~l~~~-~~D~ 83 (147)
T 1uj6_A 5 LESYKKEAAHAAIAYVQDGXVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPPE-GVDL 83 (147)
T ss_dssp THHHHHHHHHHHHTTCCTTCEEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHHHTTCCBCCCCTT-CEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCC-CEEE
T ss_conf 999999999999975799999997831889999999998765365564289607588999998616730358701-1035
Q ss_pred EECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCC----CCCCCCEEE
Q ss_conf 863300047660588316577777879986102269996230351345----578872678
Q gi|254781054|r 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL----GRGMLPIEI 137 (231)
Q Consensus 81 ~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~L----g~~plPVEV 137 (231)
+|.|||-++.+..+..........++.+..+|++.|+++|+||+-.+- -..|.-||-
T Consensus 84 aFig~~gI~~~~glt~~~~~~a~~k~~~~~~s~k~ilLaD~sKf~~~~~~~~~~~~~~~~~ 144 (147)
T 1uj6_A 84 AIDGADEIAPGLALIKGXGGALLREKIVERVAKEFIVIADHTKKVPVATRALVAGPFGVEE 144 (147)
T ss_dssp EEECCSEEEGGGEEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSCSEEEEEETTEEEE
T ss_pred EEEEHHHHCCCCCEEECCCHHHHHHHHHHHHHCCEEEEECCCEEECCCCEEEEECCCCEEE
T ss_conf 5520033345753662364888988899985100899961220421289999973995499
No 15
>>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative; 2.09A {Plasmodium falciparum 3D7} (A:1-139,A:224-244)
Probab=99.64 E-value=4.1e-15 Score=114.30 Aligned_cols=127 Identities=43% Similarity=0.579 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHH-HHCCCCCEEEECCCHHHHHHHHHHHHHHHCC--CEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEE
Q ss_conf 7899999999999-8389978998879178999999999987328--704896188999999873157865510088007
Q gi|254781054|r 3 ALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79 (231)
Q Consensus 3 ~~~~K~~~a~~A~-~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~--~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iD 79 (231)
..+.|+.+|++|+ ++|++|++|.||+|||+.+++++|+++.... .+...++.+..+.....-.|....+....-++|
T Consensus 9 ~~~~K~~IA~~Aas~lI~dg~~Ifld~GST~~~la~~L~~~~~~tv~Tns~~i~~g~~~~~~~~~~G~~~~~~l~~~~~D 88 (160)
T 2f8m_A 9 MDSLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVLERIDNLLKSGKLKDVVCIPTSIDTELKARKLGIPLTTLEKHSNID 88 (160)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEEECCSTTTHHHHHHHHHHHHHTSSCSCEEEESSHHHHHHHHHHTCCBCCCCSSCCBS
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHCCCEE
T ss_conf 99999999999999748999999857568999999999988740766654997287899999876799756644546546
Q ss_pred EEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC
Q ss_conf 98633000476605883165777778799861022699962303513455
Q gi|254781054|r 80 LSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG 129 (231)
Q Consensus 80 i~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg 129 (231)
++|.|||.+|.+..+-.......-.+|.+..+|++.|+++|+||+..+.+
T Consensus 89 ~aFig~~gi~~~~G~~~~~~~ea~ikr~mi~~a~~~illaD~sKf~~~s~ 138 (160)
T 2f8m_A 89 ITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGDESKLCTNGL 138 (160)
T ss_dssp EEEECCSEECTTCCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSCT
T ss_pred EEECCCHHCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEEEHHHEEEECC
T ss_conf 77225300085620576475245456799960245999981022453035
No 16
>>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens} (A:106-315)
Probab=99.14 E-value=1.2e-10 Score=86.52 Aligned_cols=190 Identities=14% Similarity=0.055 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHH----HHHHH-H--HCCCCC------CCC
Q ss_conf 9999999999838997899887917899999999998732870489618899----99998-7--315786------551
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN----TENFC-K--IHHIPL------HSP 72 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~----t~~~a-~--~~gi~~------~~l 72 (231)
.|+..|+.|+++|++|++|-+++|||+.++..+++.+ .+..++++..|.. ....+ . ..+.+. ...
T Consensus 2 aK~~IA~~a~~~I~~gd~I~ld~gST~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~v~~~gG~~~~~~~~~~g~~~~~~ 79 (210)
T 3ecs_A 2 SRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVA--AKKRFSVYVTESQPDLSGKKXAKALCHLNVPVTVVLDAAVG 79 (210)
T ss_dssp HHHHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHT--TTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGGGHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH--CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECHHHHH
T ss_conf 9999999988557998999997880999999999998--69955999956876336899999999769827996578999
Q ss_pred CCCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCEEEEECCHH---HHHHHH
Q ss_conf 00880079863300047660588316577777879986102269996230351345578872678725758---999999
Q gi|254781054|r 73 EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVN---KTLSAL 149 (231)
Q Consensus 73 ~~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~plPVEV~p~~~~---~v~~~l 149 (231)
-..-++|.+|-||+-|++++-..---|.|.+.. .+...|++.++++|++|+...--....|++....-.. .....
T Consensus 80 l~~~~~d~afiga~gI~~~G~~~~~~~~a~ik~-~~~~~s~~vivlad~~Kf~~~~~~~~~~~~~~~~~itd~~~~~~~- 157 (210)
T 3ecs_A 80 YIXEKADLVIVGAEGVVENGGIINKIGTNQXAV-CAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKADTLKVAQT- 157 (210)
T ss_dssp HHGGGCSEEEEECSEECTTSCEEEETTHHHHHH-HHHHTTCCEEEECCGGGBCSCCCSSGGGSCGGGTC-----------
T ss_pred HHHHCCCEEEEEEEEEECCCCEEEHHHHHHHHH-HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEECCCC-
T ss_conf 997438889982028963898855543889999-999759976873266576553325556676132167761344678-
Q ss_pred HHHHHHCCCCCEEEEEECC-CCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEEC
Q ss_conf 8632214898503772258-8636257888899820798689899999962799686648024
Q gi|254781054|r 150 KEVASCFGLNEELRLRRNG-SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI 211 (231)
Q Consensus 150 ~~~~~~~G~~~~lR~~~~~-~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~ 211 (231)
.+.+... +..+...... =--++||.|. ..|..+...|+..-...+.|++.
T Consensus 158 ~~~~~~~--~i~vd~tp~~~I~~~vTe~G~----------~~p~~~~~~l~~~~~~~~~~~~~ 208 (210)
T 3ecs_A 158 GQDLKEE--HPWVDYTAPSLITLLFTDLGV----------LTPSAVSDELIKLYLAAAEHHHH 208 (210)
T ss_dssp ---CCBC--CCSEEEECGGGCSEEEETTEE----------ECGGGHHHHHHHHHTCC------
T ss_pred CCCCCCC--CCCEECCCHHHCCEEECCCCC----------CCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9997677--866207698979999878971----------56588899999999740110224
No 17
>>3cdk_B Succinyl-COA:3-ketoacid-coenzyme A transferase subunit B; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis} (B:)
Probab=98.30 E-value=1.5e-07 Score=67.33 Aligned_cols=113 Identities=23% Similarity=0.283 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH----HHHHCCCCCCC--------
Q ss_conf 899999999999838997899887917899999999998732870489618899999----98731578655--------
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN----FCKIHHIPLHS-------- 71 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~----~a~~~gi~~~~-------- 71 (231)
.+.|++.|++|+++|++|++|-+|+|||...+.+.+. ..+.+.+..|..... +....++.+..
T Consensus 5 ~~~K~~IA~~aa~~I~dg~~i~lg~Gtt~~~~a~~~~-----~~~~~~vt~s~~i~~~~~~l~~~~~~~~~~~g~~~~~~ 79 (219)
T 3cdk_B 5 KEARKRMVKRAVQEIKDGMNVNLGIGMPTLVANEIPD-----GVHVMLQSENGLLGIGPYPLEGTEDADLINAGKETITE 79 (219)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEECSSGGGGGGTTCCT-----TCCCEEEETTTEEEEECCCBTTTCCTTCBCTTSBBCEE
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCC-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
T ss_conf 6899999999997678999999785889999986503-----77545886365136533220277566601375113211
Q ss_pred --------------CCCCCEEEEEECCHHCCCCCCEEE---------ECCCHHHHHHHHHHHHHCCEEEEEEHHHCC
Q ss_conf --------------100880079863300047660588---------316577777879986102269996230351
Q gi|254781054|r 72 --------------PEDVSSVDLSIDGFDEIDSRLRLI---------KGYGGALLREKIIAHAASRFIVIGDESKRV 125 (231)
Q Consensus 72 --------------l~~~~~iDi~iDGaDevd~~l~lI---------KGgGgAl~rEKiva~~a~~~I~i~D~sK~v 125 (231)
.-..-.+|++|=||+++|..+++- +|.++. +.+..+|++.|+++|++|+-
T Consensus 80 ~~~~~~~~g~~~~~~l~~~~~d~aflg~~~id~~gg~~~~~~~~~~~~~~~~~----~~~~~~a~~~ill~d~~k~~ 152 (219)
T 3cdk_B 80 VTGASYFDSAESFAMIRGGHIDLAILGGMEVSEQGDLANWMIPGKMVKGMGGA----MDLVNGAKRIVVIMEHVNKH 152 (219)
T ss_dssp EEEEEECCHHHHHHHHHTTCCCEEEECCSEEETTCCEECSCCTTC-CCBCTTH----HHHHHHSSEEEEECCSBCTT
T ss_pred CCCCEEECCCCCCEEECCCCCCEEEEEHHHHCCCCEEEHHHCCCCCCCCCCCC----CCEECCCCEEEEEECCCCCC
T ss_conf 35012651445503560578524885134408642211200586122587456----52203676289970326058
No 18
>>1ooy_A Succinyl-COA:3-ketoacid-coenzyme A transferase, mitochondrial precursor; alpha/beta protein; 1.70A {Sus scrofa} (A:249-481)
Probab=98.03 E-value=1.7e-06 Score=60.84 Aligned_cols=112 Identities=19% Similarity=0.166 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH----HHHH-------CCCCCC--
Q ss_conf 899999999999838997899887917899999999998732870489618899999----9873-------157865--
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN----FCKI-------HHIPLH-- 70 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~----~a~~-------~gi~~~-- 70 (231)
.+.|+..|++|+++|++|++|-+|.|||...+.+.+ ...++++++.|..... +... .|.-..
T Consensus 12 ~~~k~~Ia~~aa~~I~dg~~i~lg~Gtt~~~~a~~~-----~~~~~~iit~s~~~~~~~~~l~~~~~~~~~~~gg~~~~~ 86 (233)
T 1ooy_A 12 DNVRERIIKRAALEFEDGMYANLGIGIPLLASNFIS-----PNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTV 86 (233)
T ss_dssp -CHHHHHHHHHGGGCCTTEEEEECTTHHHHHGGGSC-----TTSCEEEEETTTEEEECCCCCGGGCCTTCBCTTSCBCCE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHC-----CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 006889999999862458700057675879998641-----034010577412126433342454047630044334104
Q ss_pred -----------CC--CCCCEEEEEECCHHCCCCCCEE---------EECCCHHHHHHHHHHHHHCCEEEEEEHHHC
Q ss_conf -----------51--0088007986330004766058---------831657777787998610226999623035
Q gi|254781054|r 71 -----------SP--EDVSSVDLSIDGFDEIDSRLRL---------IKGYGGALLREKIIAHAASRFIVIGDESKR 124 (231)
Q Consensus 71 -----------~l--~~~~~iDi~iDGaDevd~~l~l---------IKGgGgAl~rEKiva~~a~~~I~i~D~sK~ 124 (231)
++ -...++|++|=||.+||..+++ ++|.|+.. -++.+|++.++++|+++.
T Consensus 87 ~~~~~~~~g~~~~~~l~~~~~d~aflg~~~id~~g~i~~~~~~~~~~~~~~~~~----~~~~~a~~~~iv~d~~~~ 158 (233)
T 1ooy_A 87 LPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAM----DLVSSAKTKVVVTMEHSA 158 (233)
T ss_dssp EEEEEECCHHHHHHHHHTTCSSEEEECCSEEETTCCEECSCCSSSCCCCCTTHH----HHTCCTTSEEEEECCSBC
T ss_pred CCCHHHCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCHH----HHHHCCCCEEEEEEEEEC
T ss_conf 770443165433678736870399934434688873223134872344866533----486558847999741646
No 19
>>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} (B:)
Probab=97.97 E-value=2.8e-06 Score=59.39 Aligned_cols=113 Identities=18% Similarity=0.123 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHH---------------HHHHH-------
Q ss_conf 99999999999838997899887917899999999998732870489618899---------------99998-------
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN---------------TENFC------- 62 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~---------------t~~~a------- 62 (231)
+.|+..|++|+++|++|+++-+|+|+|.......+.... .++++++-+.. ....-
T Consensus 6 ~~k~~Ia~~aA~lI~dG~ti~lg~Gtt~~a~~~~~~~~~---~~l~v~t~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~ 82 (260)
T 1poi_B 6 TNKEMQAVTIAKQIKNGQVVTVGTGLPLIGASVAKRVYA---PDCHIIVESGLMDCSPVEVPRSVGDLRFMAHCGCIWPN 82 (260)
T ss_dssp CHHHHHHHHHHTTCCTTCEEECCSSHHHHHHHHHHHTTC---TTCEEEETTTEEEECCSSCCSSTTCHHHHTSEEEECCH
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCC---CCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEECCC
T ss_conf 889999999997467999999858179999999876039---97289977754277688887555641332356312575
Q ss_pred -HHCCCCCCCCCCCCEEEEEECCHHCCCCCCEE--------------EECCCHHHHHHHHHHHHHCCEEEEEEHHHC
Q ss_conf -73157865510088007986330004766058--------------831657777787998610226999623035
Q gi|254781054|r 63 -KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRL--------------IKGYGGALLREKIIAHAASRFIVIGDESKR 124 (231)
Q Consensus 63 -~~~gi~~~~l~~~~~iDi~iDGaDevd~~l~l--------------IKGgGgAl~rEKiva~~a~~~I~i~D~sK~ 124 (231)
.-.|....+.-....+|++|-||.+||.++|+ +.|.||+.. ++..|++.++..+++|.
T Consensus 83 ~~~~g~~~~~~l~~~~~d~aflga~~ID~~g~vn~~~~~~~~~~~~~~~g~gg~~~----~a~~ak~~~~~~~~~r~ 155 (260)
T 1poi_B 83 VRFVGFEINEYLHKANRLIAFIGGAQIDPYGNVNSTSIGDYHHPKTRFTGSGGANG----IATYSNTIIMMQHEKRR 155 (260)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEECCSEECTTCCEECSEEECSSSEEEECCCCTTHHH----HHHHSCEEEECCCCTTT
T ss_pred CEECCHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH----HHCCCCEEEEECCCCCC
T ss_conf 14140777788765897669967788286565000122565577732246777314----44057545884577543
No 20
>>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii OT3} (A:)
Probab=97.57 E-value=0.0033 Score=40.32 Aligned_cols=132 Identities=20% Similarity=0.176 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHCCCCCEE-EECCCHHHHHHHHHHHHHHHCCCEEEEEEC-----HHHHHHHHHHCCCCCCCCCCC--
Q ss_conf 899999999999838997899-887917899999999998732870489618-----899999987315786551008--
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTL-GMGTGSTAKEFMILLADKIANGFRVQVIPS-----SRNTENFCKIHHIPLHSPEDV-- 75 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmvi-GlGtGSTv~~~i~~L~~~~~~~~~i~~v~t-----S~~t~~~a~~~gi~~~~l~~~-- 75 (231)
.+..+.++..|.+++++|++| =.|-.+||..|+....+.. ..+.+.+.-+ +.+.+..+.+.|||+.-..+.
T Consensus 93 ~~~~~~i~~~~~~~i~~~~~ILT~~~S~~V~~~l~~a~~~~-~~~~v~V~EsrP~~eG~~la~~L~~~gi~vt~i~ds~~ 171 (276)
T 1vb5_A 93 EEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERK-KRFKVILTESSPDYEGLHLARELEFSGIEFEVITDAQM 171 (276)
T ss_dssp HHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTT-CCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCC-CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECHHHH
T ss_conf 99999999986776599988997183389999999999879-96699997377655658999999971983389555689
Q ss_pred ----CEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEE
Q ss_conf ----800798633000476605883165777778799861022699962303513455-78872678
Q gi|254781054|r 76 ----SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEI 137 (231)
Q Consensus 76 ----~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV 137 (231)
.++|..+=|||-|..|+.++-=-|...+= -.-......|+++++..|+.+.-- .-..|.|.
T Consensus 172 ~~~m~~vd~VliGad~i~~nG~v~nk~Gt~~iA-l~Ak~~~vPv~v~~e~~K~~~~~~~~~~~~~e~ 237 (276)
T 1vb5_A 172 GLFCREASIAIVGADMITKDGYVVNKAGTYLLA-LACHENAIPFYVAAETYKFHPTLKSGDVMLMER 237 (276)
T ss_dssp HHHHTTCSEEEECCSEECTTSCEEEETTHHHHH-HHHHHTTCCEEEECCGGGBCSSCCGGGCCCCBC
T ss_pred HHHHHHCCEEEEEEEEEECCCCEEECCCHHHHH-HHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEC
T ss_conf 999663887998534896389843302177899-999863897289604555577788988042016
No 21
>>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} (A:1-99,A:149-220)
Probab=97.09 E-value=0.0038 Score=39.92 Aligned_cols=113 Identities=21% Similarity=0.149 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHCCCCCEEEECC---CHHHHHHHHHHHHHHHCCCEEEEEE----------------------------CH
Q ss_conf 9999999998389978998879---1789999999999873287048961----------------------------88
Q gi|254781054|r 7 KRNAARRAIQYVVDGMTLGMGT---GSTAKEFMILLADKIANGFRVQVIP----------------------------SS 55 (231)
Q Consensus 7 K~~~a~~A~~~v~~gmviGlGt---GSTv~~~i~~L~~~~~~~~~i~~v~----------------------------tS 55 (231)
|..-+++|+.+|+|||+|++|+ -.+-..++++|+++-.. +++.+. ++
T Consensus 4 Kv~s~~eA~~~I~dG~ti~~gGf~~~g~P~~l~~aL~~~~~~--~Ltl~~~~~~g~~~~~~~l~~~g~i~r~~~~~~g~~ 81 (171)
T 1k6d_A 4 KLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVR--DLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTN 81 (171)
T ss_dssp SEECHHHHGGGCCTTCEEEECCBTTBTCCHHHHHHHHHHTCC--SEEEECSBCCCTTSTTHHHHHTTCEEEEEESBCTTC
T ss_pred CCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCC--CCEEEECCCCCCCHHHHHHHHHCEEEEEECCCCCCC
T ss_conf 215399999549996999988815538599999999972888--865765688767023565654050507885765569
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCC
Q ss_conf 9999998731578655100880079863300047660588316577777879986102269996230351345
Q gi|254781054|r 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL 128 (231)
Q Consensus 56 ~~t~~~a~~~gi~~~~l~~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~L 128 (231)
...+....+-.++.. .-.+|+++=-+-.-|.++|+.=+| .+.-.....+.+++..|+-+++ .|+..
T Consensus 82 p~~~~~i~~g~i~~~----~~p~Dva~i~~~~aD~~Gn~~~~g-~~~~~~~~~~~aa~~VI~~v~~--~v~~~ 147 (171)
T 1k6d_A 82 PETGRRMISGEMDVV----LVPADLALIRAHRCDTLGNLTYQL-SARNFNPLIALAADITLVEPDE--LVETG 147 (171)
T ss_dssp HHHHHHHHTTSSEEE----ECCEEEEEEEEEEEETTCCEECCH-HHHTTHHHHHHHEEEEEEEEEE--EECTT
T ss_pred HHHHHHHHCCCEEEE----ECCCCEEEEEEEECCCCCCEEEEC-CCCCCHHHHHHHCCCEEEEEEE--EECCC
T ss_conf 789999767975899----836888999978478888557833-5444329999839969999968--85478
No 22
>>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} (A:114-347)
Probab=96.72 E-value=0.033 Score=34.09 Aligned_cols=132 Identities=18% Similarity=0.180 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEE-CCCHHHHHHHH-----HHHHHHHCCCEEEE-EECH-------HHHHHHHHHCCCCC
Q ss_conf 89999999999983899789988-79178999999-----99998732870489-6188-------99999987315786
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGM-GTGSTAKEFMI-----LLADKIANGFRVQV-IPSS-------RNTENFCKIHHIPL 69 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGl-GtGSTv~~~i~-----~L~~~~~~~~~i~~-v~tS-------~~t~~~a~~~gi~~ 69 (231)
.+..+..++.+.++|++|++|-. |-.+||..|+. .+....+.+.+.++ |+-| .-+...+.+.|||+
T Consensus 19 ~~~~~~I~~~~~~~i~d~~~ILT~g~S~~V~~~L~~aa~~~~~~a~~~~~~f~V~v~es~P~~~G~~~~a~~l~~~gi~v 98 (234)
T 1t9k_A 19 IEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPYLQGARLTAWELXKDGIEV 98 (234)
T ss_dssp HHHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCEEEEEECCTTTTHHHHTHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHEEHHHHHHHCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 99989989877876147977999448403320001112201014550694379998238653468899999987606734
Q ss_pred CCCCC--------CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHH-HHCCEEEEEEHHHCCCCCC-CCCCCEEE
Q ss_conf 55100--------880079863300047660588316577777879986-1022699962303513455-78872678
Q gi|254781054|r 70 HSPED--------VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH-AASRFIVIGDESKRVDFLG-RGMLPIEI 137 (231)
Q Consensus 70 ~~l~~--------~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~-~a~~~I~i~D~sK~v~~Lg-~~plPVEV 137 (231)
.-..+ ..++|..+=|||-|-+|+.++---|.++.- ++|. ...-++++++..|+.+.-- ....+.|.
T Consensus 99 ~~i~ds~~~~~~~m~~vd~VllGA~~v~~nG~i~n~~Gt~~ia--~~Ak~~~vPv~v~ae~~K~~~~~~~~~~~~~e~ 174 (234)
T 1t9k_A 99 YVITDNXAGWLXKRGLIDAVVVGADRIALNGDTANKIGTYSLA--VLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEE 174 (234)
T ss_dssp EEECGGGHHHHHHTTCCSEEEECCSEEETTSCEEEETTHHHHH--HHHHHTTCCEEEECCGGGEETTCSSGGGSCCCB
T ss_pred EEECCHHHHHHHHCCCCCEEEEECCEEECCCCEEECCCHHHHH--HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 7730105888863065545885010542379864326789999--999873887599840367687788804276504
No 23
>>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis} (A:191-434)
Probab=96.44 E-value=0.0089 Score=37.64 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHH-HHHHHHCCCCCC-----------
Q ss_conf 78999999999998389978998879178999999999987328704896188999-999873157865-----------
Q gi|254781054|r 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT-ENFCKIHHIPLH----------- 70 (231)
Q Consensus 3 ~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t-~~~a~~~gi~~~----------- 70 (231)
..+.|++.|+.|+.+|++|++|=+|.|||...+..+|.+ ..++.+++.+... ..++.+.|.-..
T Consensus 5 ~~~~~~~Ia~~aA~~I~dG~~v~~GiG~~~~ava~~L~~----~~~l~~~T~~~~~a~~~~~e~G~~~~~~~~~~~~~~~ 80 (244)
T 3eh7_A 5 IGEVEEAIGRNCAELIEDGATLQLGIGAIPDAALLFLKD----KKDLGIHTEXFSDGVVELVRSGVITGKKKTLHPGKXV 80 (244)
T ss_dssp CCHHHHHHHHHHHHTCCTTCEEECCSSHHHHHHHHTTTT----CCSBEEECSEECHHHHHHHHTTSBCCTTCSSSTTCEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC----CCCEEEEEECCCCEEEECCCCCCCCCCHHHHCCCCEE
T ss_conf 863666774300432266543012222699999985354----7853589954222025153488734414430268358
Q ss_pred -----------------------C--------CCCCCEEEEEECCHHCCCCCCEE
Q ss_conf -----------------------5--------10088007986330004766058
Q gi|254781054|r 71 -----------------------S--------PEDVSSVDLSIDGFDEIDSRLRL 94 (231)
Q Consensus 71 -----------------------~--------l~~~~~iDi~iDGaDevd~~l~l 94 (231)
+ .-.....|++|=||-|||..+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~va~l~a~qvD~~Gnv 135 (244)
T 3eh7_A 81 ATFLXGSEDVYHFIDKNPDVELYPVDYVNDPRVIAQNDNXVSINSCIEIDLXGQV 135 (244)
T ss_dssp ESEECCCHHHHHHHTTCTTEEECCHHHHTCHHHHTTSSSEEEEECCSEEETTCCE
T ss_pred EEECCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCEEEEEEEEECCCCCE
T ss_conf 8854756999976403866378524224874776134663787534676057846
No 24
>>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein structure initiative; HET: COA; 2.40A {Shewanella oneidensis mr-1} (A:1-181)
Probab=96.21 E-value=0.011 Score=37.01 Aligned_cols=125 Identities=15% Similarity=0.088 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCH-HHHHHHHHHHHHHHCCCEEEEEEC------------------------HHHHHHH
Q ss_conf 999999999838997899887917-899999999998732870489618------------------------8999999
Q gi|254781054|r 7 KRNAARRAIQYVVDGMTLGMGTGS-TAKEFMILLADKIANGFRVQVIPS------------------------SRNTENF 61 (231)
Q Consensus 7 K~~~a~~A~~~v~~gmviGlGtGS-Tv~~~i~~L~~~~~~~~~i~~v~t------------------------S~~t~~~ 61 (231)
|..-+.+|+++|++||+|++|.+. +-..++++|.++.+...+++++.. +-..+..
T Consensus 5 K~~s~~eAv~~I~~G~~I~~gg~~~~P~~l~~aL~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~r~~ 84 (181)
T 2oas_A 5 VCQSALEAVSLIRSGETLWTHSXGATPKVLLDALAKHALTLDNITLLQLHTEGAESLSHPSLLGHLRHRCFFGGVPTRPL 84 (181)
T ss_dssp ECSSHHHHHTTCCTTCEEEECCBTTCCHHHHHHHHHHGGGCCSEEEEESSBSSCGGGGSGGGTTTEEEEESSCCTTTHHH
T ss_pred HHCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCHHHCCEEEECCCCCCHHHHHH
T ss_conf 22789999951999799997898668799999999747506986999955777533215344086999058789899999
Q ss_pred HHHCCCCCCC-----C-----CCCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCC-CCC
Q ss_conf 8731578655-----1-----0088007986330004766058831657777787998610226999623035134-557
Q gi|254781054|r 62 CKIHHIPLHS-----P-----EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF-LGR 130 (231)
Q Consensus 62 a~~~gi~~~~-----l-----~~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~-Lg~ 130 (231)
.++-.+...+ . ...-.+|+++=.+-..|.++|+-=|...... +..+.+|++.|+-+.+ .++. .|.
T Consensus 85 ~~~g~~~~~~~~~~~~~~~~~~~~l~~Dvali~~s~~D~~G~~s~~~~~~~~--~~~~~~A~~VI~eVn~--~~p~~~g~ 160 (181)
T 2oas_A 85 LQSGDADYVPIFLSEVPKLFRSGEQKIDTAIIQVSPPDKHGXCSLGISVEAT--LAACQVAGKIIAHINP--QXPRTHGD 160 (181)
T ss_dssp HHTTSSEECCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTCEEECTTBCTTH--HHHHHHCSEEEEEECT--TSCCCEES
T ss_pred HHCCCCEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHH--HHHHHHCCEEEEEECC--CCCCCCCC
T ss_conf 9769970567413679999975999998699998568988713257522568--9999737869998426--66878888
Q ss_pred CCCCE
Q ss_conf 88726
Q gi|254781054|r 131 GMLPI 135 (231)
Q Consensus 131 ~plPV 135 (231)
.-+|+
T Consensus 161 ~~i~~ 165 (181)
T 2oas_A 161 GFIHI 165 (181)
T ss_dssp CEEEG
T ss_pred CCCCC
T ss_conf 60455
No 25
>>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} (A:1-187)
Probab=96.14 E-value=0.016 Score=36.05 Aligned_cols=127 Identities=13% Similarity=0.070 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCC-HHHHHHHHHHHHHHHCCCEEEEEE------------------------CHHHHH
Q ss_conf 9999999999983899789988791-789999999999873287048961------------------------889999
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMGTG-STAKEFMILLADKIANGFRVQVIP------------------------SSRNTE 59 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlGtG-STv~~~i~~L~~~~~~~~~i~~v~------------------------tS~~t~ 59 (231)
..|..-+.+|+.+|+||++|.+|.+ ++-..++++|.++.++-.+++.+. .+..++
T Consensus 8 ~~K~~s~~eA~~~I~~G~~I~~gg~~~~P~~l~~aL~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 87 (187)
T 3gk7_A 8 EDRTCTADEAVKSIKSGDRVLFAHCVAEPPVLVEAMVANAAAYKNVTVSHMVTLGKGEYSKPEYKENFTFEGWFTSPSTR 87 (187)
T ss_dssp HHTBCCHHHHGGGCCTTCEEEECSGGGCCHHHHHHHHHTGGGCSSEEEEESSCSSCCGGGSGGGTTTEEEEESSCCTTTH
T ss_pred HHCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHCCCEEEECCCCCHHHH
T ss_conf 67589399999509997999988986888999999997453578839997336676422556760959996577898999
Q ss_pred HHHHHCCCCCCC--CC--------CCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCC-
Q ss_conf 998731578655--10--------0880079863300047660588316577777879986102269996230351345-
Q gi|254781054|r 60 NFCKIHHIPLHS--PE--------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL- 128 (231)
Q Consensus 60 ~~a~~~gi~~~~--l~--------~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~L- 128 (231)
...++-.+.... +. ..-++|+++=-+-..|.++|+-=|+..... +-.+.+|++.|+.+.+ .+++.
T Consensus 88 ~~~~~g~~~~~~~~~~~~~~~l~~~~~~~DVali~~s~~D~~Gn~slg~~~~~~--~~~~~~A~~vIvevn~--~vp~~~ 163 (187)
T 3gk7_A 88 GSIAEGHGQFVPVFFHEVPSLIRKDIFHVDVFMVMVSPPDHNGFCCVGVSSDYT--MQAIKSAKIVLAEVND--QVPVVY 163 (187)
T ss_dssp HHHHHTSSEECCCCGGGHHHHHHTTTTCCSEEEEEECCCCTTSEEECCSBCBTH--HHHHHHCSEEEEEEET--TSCCCS
T ss_pred HHHHCCCCEEECCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHH--HHHHHHCCEEEEEECC--CCCCCC
T ss_conf 998769956989710127999964899972999997247899813225770468--9998735829999626--788779
Q ss_pred CCCCCCE
Q ss_conf 5788726
Q gi|254781054|r 129 GRGMLPI 135 (231)
Q Consensus 129 g~~plPV 135 (231)
|..-+|+
T Consensus 164 g~~~ip~ 170 (187)
T 3gk7_A 164 GDTFVHV 170 (187)
T ss_dssp BSCEEEG
T ss_pred CCCCCCC
T ss_conf 9962556
No 26
>>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis} (A:1-190)
Probab=96.13 E-value=0.016 Score=36.05 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCHH-HHHHHHHHHHHHHCCCEEEEEEC------------------------HHHHH
Q ss_conf 999999999998389978998879178-99999999998732870489618------------------------89999
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMGTGST-AKEFMILLADKIANGFRVQVIPS------------------------SRNTE 59 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlGtGST-v~~~i~~L~~~~~~~~~i~~v~t------------------------S~~t~ 59 (231)
+.|..-+.+|+.+|+||++|++|+.+- -..++++|.++.+.-.+++++.. +...+
T Consensus 12 ~~K~~s~~eAv~~i~~G~~I~~gg~~~~P~~l~~aL~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 91 (190)
T 3eh7_A 12 ASRIVSAEEAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHXLCLGEGKYXAPEXAPHFRHITNFVGGNSR 91 (190)
T ss_dssp GGGEECHHHHHTTCCTTCEEEECCGGGCCHHHHHHHHHSTTTC--CEEECCBCTTCC-----------------------
T ss_pred HHCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCEEEEECCCCCHHHH
T ss_conf 87489399999609996999989997888999999997563468967998756656401472232809995388898999
Q ss_pred HHHHHCCCCCCC--CC--------CCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCC-
Q ss_conf 998731578655--10--------0880079863300047660588316577777879986102269996230351345-
Q gi|254781054|r 60 NFCKIHHIPLHS--PE--------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL- 128 (231)
Q Consensus 60 ~~a~~~gi~~~~--l~--------~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~L- 128 (231)
...++-.+...+ +. ..-.+|+++=.+-..|.++|+.=|+.....+ -.+.+|++.|+-+.+ .+++-
T Consensus 92 ~~~~~g~~~~~~~~~~~~~~~l~~~~~~~DVaii~~s~~D~~Gn~~lg~~~~~~~--~~~~~A~~VIvevn~--~vp~~~ 167 (190)
T 3eh7_A 92 KAVEENRADFIPVFFYEVPSXIRKDILHIDVAIVQLSXPDENGYCSFGVSCDYSK--PAAESAHLVIGEINR--QXPYVH 167 (190)
T ss_dssp ------CTTCCCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTSEEECTTBCTTHH--HHHHHCSEEEEEEET--TSCCCE
T ss_pred HHHHCCCCEEECCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCHHH--HHHHHCCEEEEEECC--CCCCCC
T ss_conf 9997699702057511789999708888868999962568998365358840579--999738849997242--014678
Q ss_pred CCCCCCE
Q ss_conf 5788726
Q gi|254781054|r 129 GRGMLPI 135 (231)
Q Consensus 129 g~~plPV 135 (231)
|..-+|+
T Consensus 168 ~~~~Ip~ 174 (190)
T 3eh7_A 168 GDNLIHI 174 (190)
T ss_dssp ESCEEEG
T ss_pred CCCCCCC
T ss_conf 9850224
No 27
>>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Porphyromonas gingivalis W83} (A:1-187)
Probab=96.12 E-value=0.022 Score=35.20 Aligned_cols=131 Identities=11% Similarity=0.136 Sum_probs=84.7
Q ss_pred CCHH---HHHHHHHHHHH-HHCCCCCEEEECCCHH-HHHHHHHHHHHHHCCCEEEEEE----------------------
Q ss_conf 9878---99999999999-8389978998879178-9999999999873287048961----------------------
Q gi|254781054|r 1 MDAL---QMKRNAARRAI-QYVVDGMTLGMGTGST-AKEFMILLADKIANGFRVQVIP---------------------- 53 (231)
Q Consensus 1 M~~~---~~K~~~a~~A~-~~v~~gmviGlGtGST-v~~~i~~L~~~~~~~~~i~~v~---------------------- 53 (231)
||-. ..|..-+..|+ ++|++||.|++|.++- -..++++|.++.+...+++.+.
T Consensus 1 M~~~~~~~~K~~s~~eAv~~~i~~G~~I~~~g~~~~P~~l~~aL~~~~~~~~~l~l~~~~~~g~~~~~~~~~~~~~~~~~ 80 (187)
T 3d3u_A 1 MQWQELYRQRVCSADEAVVDSLKPGTKVVFGHAAAAPVRFSQAMYRQREKLENITVFHMLYFGDAPHLAPEMRSHVHPTL 80 (187)
T ss_dssp -CCHHHHHHHBCCHHHHHHHHCCTTCEEEECCBTTCCHHHHHHHHHTTTTCCSEEEECSCBSSCCTTSSGGGTTTEEEEC
T ss_pred CCHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCEEEEC
T ss_conf 98578887458809999872698949999889867899999999986568999699986677783544057546589945
Q ss_pred --CHHHHHHHHHHCCCCCCC--C--------CCCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEH
Q ss_conf --889999998731578655--1--------0088007986330004766058831657777787998610226999623
Q gi|254781054|r 54 --SSRNTENFCKIHHIPLHS--P--------EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121 (231)
Q Consensus 54 --tS~~t~~~a~~~gi~~~~--l--------~~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~ 121 (231)
++...+.....-.+...+ + ...-.+|+++=.+-..|.++|+.=|+.....+ -.+.+|++.|+-+.+
T Consensus 81 ~~~~~~~r~~~~~g~~~~~p~~~~~~~~~l~~~~~~~Dvali~~s~~D~~Gn~sl~~~~~~~~--~~~~aA~~VIvevn~ 158 (187)
T 3d3u_A 81 NFLEGNSRPASRDRRVDFIPCHFHEVPELFRQGFFPLDVAVVQVSTPNEEGYCSFGVSCDYTK--AAAECAPVVVAEVNK 158 (187)
T ss_dssp --------------------CCGGGHHHHHTTSSSCCSEEEEEEECCCTTSEEECTTBCBTHH--HHHHHCSEEEEEEES
T ss_pred CCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCHHHHH--HHHHHCCEEEECCCC
T ss_conf 778989999997699623388011599999828999619999986179896685157764799--999737807604677
Q ss_pred HHCCCCC-CCCCCCE
Q ss_conf 0351345-5788726
Q gi|254781054|r 122 SKRVDFL-GRGMLPI 135 (231)
Q Consensus 122 sK~v~~L-g~~plPV 135 (231)
.++.. |...+|+
T Consensus 159 --~vp~~~g~~~Ip~ 171 (187)
T 3d3u_A 159 --QMPFIGGENLIHI 171 (187)
T ss_dssp --SSCCCEESCEEEG
T ss_pred --CCCCCCCCCEECC
T ss_conf --7785799977316
No 28
>>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis} (A:)
Probab=96.05 E-value=0.037 Score=33.79 Aligned_cols=119 Identities=18% Similarity=0.083 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEECC--C-HHHHHHHHHHHHHHHCCCEEEEEE--------------------------CHH
Q ss_conf 99999999998389978998879--1-789999999999873287048961--------------------------889
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMTLGMGT--G-STAKEFMILLADKIANGFRVQVIP--------------------------SSR 56 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmviGlGt--G-STv~~~i~~L~~~~~~~~~i~~v~--------------------------tS~ 56 (231)
.|..-+.+|+++|+|||+|++|. + ..-..++++|+++-.+.+++...+ ++.
T Consensus 6 ~K~~s~~eA~~~I~~G~~i~~~gf~~~~~P~al~~aL~~~~~~~l~~~~~~~~~~~~~~~~l~~~g~v~~~~~~~~g~~~ 85 (241)
T 3cdk_A 6 KVLSSSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQGVKDLTVVSNNCGVDDWGLGLLLANKQIKKMIASYVGENK 85 (241)
T ss_dssp CBCSCHHHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHHTCCSEEEEESSCCCSSSTTHHHHHTTCEEEEEESBCCSCH
T ss_pred CEECCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCC
T ss_conf 33079999983199969999988056156999999999859998641205877774342435532734057614524773
Q ss_pred HH---------------------HHHHHHCCCCCC---C---------------------CCCCCEEEEEECCHHCCCCC
Q ss_conf 99---------------------999873157865---5---------------------10088007986330004766
Q gi|254781054|r 57 NT---------------------ENFCKIHHIPLH---S---------------------PEDVSSVDLSIDGFDEIDSR 91 (231)
Q Consensus 57 ~t---------------------~~~a~~~gi~~~---~---------------------l~~~~~iDi~iDGaDevd~~ 91 (231)
.. ...+...|.|-. . ....-++|+++=-+...|.+
T Consensus 86 ~~r~~~~~g~i~~~~~~~~~~~~~l~ag~~~~p~~~~~~~~~t~~~~~~p~~~~~~~~~~~~~~~~~Dvali~vs~~D~~ 165 (241)
T 3cdk_A 86 IFERQFLSGELEVELVPQGTLAERIRAGGAGIPGFYTATGVGTSIAEGKEHKTFGGRTYVLERGITGDVAIVKAWKADTM 165 (241)
T ss_dssp HHHHHHTTTSSEEEECCHHHHHHHHHHHHHTCCEEEESTTTTSGGGTTSCEEEETTEEEEEEECCCEEEEEEEEEEEETT
T ss_pred HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCEEEEECCCCCCEEEEEEEECCCC
T ss_conf 54444317861899857589999999987699945765303654455763201188359971476898899998667995
Q ss_pred CEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCC
Q ss_conf 058831657777787998610226999623035134
Q gi|254781054|r 92 LRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127 (231)
Q Consensus 92 l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~ 127 (231)
+|+.=|+-.-...+ .++.++++.|+-+++ .+++
T Consensus 166 G~~~~~~~~~~~~~-~~~~Aak~VIvevn~--~vp~ 198 (241)
T 3cdk_A 166 GNLIFRKTARNFNP-IAAMAGKITIAEAEE--IVEA 198 (241)
T ss_dssp CCEECCGGGCTTHH-HHHHHEEEEEEEEEE--EECT
T ss_pred EEEEEECCCCCCCH-HHHHCCCEEEEEEEE--ECCC
T ss_conf 43679846542408-898579969999998--7267
No 29
>>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit delta; structural genomics, PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus dsm 4304} (A:144-351)
Probab=95.78 E-value=0.13 Score=30.32 Aligned_cols=118 Identities=19% Similarity=-0.015 Sum_probs=80.0
Q ss_pred CCCCCEEEECCCH---------HHHHHHHHHHHHHHCCCEEEEEEC-----H-HHHHHHHHHCCCCCCCCCCC------C
Q ss_conf 8997899887917---------899999999998732870489618-----8-99999987315786551008------8
Q gi|254781054|r 18 VVDGMTLGMGTGS---------TAKEFMILLADKIANGFRVQVIPS-----S-RNTENFCKIHHIPLHSPEDV------S 76 (231)
Q Consensus 18 v~~gmviGlGtGS---------Tv~~~i~~L~~~~~~~~~i~~v~t-----S-~~t~~~a~~~gi~~~~l~~~------~ 76 (231)
|.+|++|-.=+.| |+..+++...++. ..+.+.++-| . ..+...+.+.|||+.-..+. .
T Consensus 1 I~~~d~ILT~~~S~~V~~~l~~~~~~~l~~a~~~~-~~f~Viv~es~P~~eg~~~~a~~L~~~gi~vt~i~dsav~~~m~ 79 (208)
T 1t5o_A 1 LEDGDVVLTYCNAGRLATVDWGTALGVVRSAVEQG-KEIRVIACETRPLNQGSRLTCWELMEDGIDVTLITDSMVGIVMQ 79 (208)
T ss_dssp CCTTCEEEECSCCSSSSSSSSCSHHHHHHHHHHTT-CCCEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHH
T ss_pred HCCCCEEEEECCCCHHHHHHHHHHHHHEEEEEECC-CEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHH
T ss_conf 14898899823863445666555344314466079-61699994368866524689999987488847960446899864
Q ss_pred --EEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCEEEE
Q ss_conf --00798633000476605883165777778799861022699962303513455788726787
Q gi|254781054|r 77 --SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138 (231)
Q Consensus 77 --~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~plPVEV~ 138 (231)
.+|..+=|||-|..|.-+-|-|...+.. ..-....-++++++.-|+.+......+|+|..
T Consensus 80 ~~~vd~VilGad~V~~ng~ink~GT~~ia~--~Ak~~~vPv~v~ae~~Kf~~~~~~~~~~~~~~ 141 (208)
T 1t5o_A 80 KGMVDKVIVGADRIVRDAVFNKIGTYTVSV--VAKHHNIPFYVAAPKATFDWERTAKDVVIEER 141 (208)
T ss_dssp TTCCSEEEECCSEEETTEEEEETTHHHHHH--HHHHTTCCEEEECCGGGBCTTCCGGGCCCCBC
T ss_pred HCCCCEEEECHHHEEHHCCCCHHHHHHHHH--HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 057526763144310013503114899999--99873984799933555476677243242358
No 30
>>1xr4_A Putative citrate lyase alpha chain/citrate-ACP transferase; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium LT2} (A:120-157,A:239-509)
Probab=95.65 E-value=0.17 Score=29.68 Aligned_cols=121 Identities=19% Similarity=0.171 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHH------HCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEEE--ECHHHHHHHHHHCCCCC------
Q ss_conf 999999999998------3899789988791789999999999873-28704896--18899999987315786------
Q gi|254781054|r 5 QMKRNAARRAIQ------YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVI--PSSRNTENFCKIHHIPL------ 69 (231)
Q Consensus 5 ~~K~~~a~~A~~------~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~v--~tS~~t~~~a~~~gi~~------ 69 (231)
+..++.|+.+++ ++.+|..+=+|.|+-.......|.++.+ .+.+...- +.+-....+++.-.++.
T Consensus 48 ~~~~~IA~rvA~ei~~~~~v~dG~~iq~GiG~ip~av~~~L~~~~~~~gi~~~~~~g~~~d~~~~L~~aG~i~~~~~~~~ 127 (309)
T 1xr4_A 48 PRELLIARQAANVIEHSGYFCDGFSLQTGTGGASLAVTRFLEDKXRRHNITASFGLGGITGTXVDLHEKGLIKALLDTQS 127 (309)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSTTEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEECHHHHHHHHTTSBSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEE
T ss_conf 58999999999987524544578532026785089999998653302534656763754466788987887324130165
Q ss_pred ---------------------C------CCCCCCEEEEEECCHHCCCCCCEE----------EECCCHHHHHHHHHHHHH
Q ss_conf ---------------------5------510088007986330004766058----------831657777787998610
Q gi|254781054|r 70 ---------------------H------SPEDVSSVDLSIDGFDEIDSRLRL----------IKGYGGALLREKIIAHAA 112 (231)
Q Consensus 70 ---------------------~------~l~~~~~iDi~iDGaDevd~~l~l----------IKGgGgAl~rEKiva~~a 112 (231)
. ......++|++|-||=|||..+|. +-|-||+.=- ++.|
T Consensus 128 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ldvavlga~EVD~~GnvNs~~~~~g~~~~G~GG~~Df----~~gA 203 (309)
T 1xr4_A 128 FDGDAARSLAQNPHHIEISTNQYANPASKGAACERLNVVXLSALEIDVNFNVNVXTGSNGVLRGASGGHSDT----AAGA 203 (309)
T ss_dssp CSHHHHHHHHHCTTEEECCHHHHTCTTCSCCGGGGCSEEEECCSEECTTCCEECSBCTTSCBCSBCTTHHHH----HHHS
T ss_pred CCHHHHHHHHHCCCEEEEECHHCCCCHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCEECCCCCHHHH----HCCC
T ss_conf 472889988738980898011204877785134776479771168705784688972898275787657888----6357
Q ss_pred CCEEEEE-----EHHHCCCCCC
Q ss_conf 2269996-----2303513455
Q gi|254781054|r 113 SRFIVIG-----DESKRVDFLG 129 (231)
Q Consensus 113 ~~~I~i~-----D~sK~v~~Lg 129 (231)
++.|+.. +.+|+|+.+.
T Consensus 204 ~~sIv~~~~t~~~~skiV~~~~ 225 (309)
T 1xr4_A 204 DLTIITAPLVRGRIPCVVEKVL 225 (309)
T ss_dssp SEEEEECCSEETTEESBCSSCS
T ss_pred CCEEEECCCCCCCCCEEECCCC
T ss_conf 7557760413689882626886
No 31
>>1poi_A Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} (A:1-116,A:171-243)
Probab=95.64 E-value=0.042 Score=33.49 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=70.9
Q ss_pred HHHHHHHCCCCCEEEECCCHHH---HHHHHHHHHHHHCCCEEEEEEC--HHHHHHHHH----------------------
Q ss_conf 9999983899789988791789---9999999998732870489618--899999987----------------------
Q gi|254781054|r 11 ARRAIQYVVDGMTLGMGTGSTA---KEFMILLADKIANGFRVQVIPS--SRNTENFCK---------------------- 63 (231)
Q Consensus 11 a~~A~~~v~~gmviGlGtGSTv---~~~i~~L~~~~~~~~~i~~v~t--S~~t~~~a~---------------------- 63 (231)
+++++++|+|||+|++|.-+.. ..++.+|.++-... ++.++. ......++.
T Consensus 7 ~eava~~I~dG~~i~~~Gf~~~~~P~al~~al~~~~~~~--Lt~i~~~~~~~~~~l~~~G~v~rvi~~~~g~~~~~~~~p 84 (189)
T 1poi_A 7 KDAIAKYVHSGDHIALGGFTTDRKPYAAVFEILRQGITD--LTGLGGAAGGDWDMLIGNGRVKAYINCYTANSGVTNVSR 84 (189)
T ss_dssp HHHHHHHCCTTCEEEECSBTTBSCCHHHHHHHHHTTCCC--EEEECSEECHHHHHHHHTTCEEEEEESEECBTTTBSSCH
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC--EEEEEECCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCH
T ss_conf 999995199969999887356698999999999719997--299971787667777427863268872012577677687
Q ss_pred -------HCCCCCCCCCC------------CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHC
Q ss_conf -------31578655100------------88007986330004766058831657777787998610226999623035
Q gi|254781054|r 64 -------IHHIPLHSPED------------VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124 (231)
Q Consensus 64 -------~~gi~~~~l~~------------~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~ 124 (231)
+-.|...+... --++|+++=.+...|.++|+.=|...-..+ -.+.+|++.|+-+++ .
T Consensus 85 ~~r~~v~~g~ie~~d~~~g~i~~~lrag~~Gl~~Dva~i~~s~~D~~Gn~~~g~~~~~~~--~~~~~a~~VI~evn~--~ 160 (189)
T 1poi_A 85 RFRKWFEAGKLTMEDYSQDVIYMMWHAAALGLQVDVAIIHAQQASPDGTVRIWGGKFQDV--DIAEAAKYTIVTCEE--I 160 (189)
T ss_dssp HHHHHHHHTCSEEEECCHHHHHHHHHHHHHTCCCSEEEEEEEEECTTCCEECCSCCTTHH--HHHHHSSEEEEEEEE--E
T ss_pred HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCH--HHHHHCCCEEEEEEE--E
T ss_conf 999973268459998988999999999757998858999856617987089956776798--999629928999999--9
Q ss_pred CCC
Q ss_conf 134
Q gi|254781054|r 125 VDF 127 (231)
Q Consensus 125 v~~ 127 (231)
++.
T Consensus 161 vp~ 163 (189)
T 1poi_A 161 ISD 163 (189)
T ss_dssp CCH
T ss_pred EEC
T ss_conf 825
No 32
>>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A* (A:)
Probab=95.17 E-value=0.26 Score=28.55 Aligned_cols=132 Identities=20% Similarity=0.103 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCH---------HHHHHHHHHHHHHHCCCEEEEEEC-----H-HHHHHHHHHCCCCC
Q ss_conf 99999999999838997899887917---------899999999998732870489618-----8-99999987315786
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMGTGS---------TAKEFMILLADKIANGFRVQVIPS-----S-RNTENFCKIHHIPL 69 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlGtGS---------Tv~~~i~~L~~~~~~~~~i~~v~t-----S-~~t~~~a~~~gi~~ 69 (231)
+..+..++.+.++|++|++|--=+-| |+...+....++ ...+++.+.-| . .-|+..+.+.|||+
T Consensus 158 ~a~~~I~~~~~~~i~~g~~ILT~~~S~~v~~~l~~ta~~~i~~a~~~-gk~~~V~v~EsrP~~eG~~l~a~~L~~~GI~v 236 (374)
T 2yvk_A 158 ETCRLIGQNALQLFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQK-DLGLHIYACETRPVLQGSRLTAWELMQGGIDV 236 (374)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCSTTTSSSSCSTTHHHHHHHHT-TCCCEEEEECCTTTTHHHHTHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHEECCCCEEEEECCCCCEEEEEHHHHHHHHHHHHCC-CCCCEEEECCCCCCCCHHHHHHHEEHHCCCCE
T ss_conf 99999999976532489889774277411321112156778876414-65514663244334521223320002046632
Q ss_pred CCCCCC--------CEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHH-HHHCCEEEEEEHHHCCCCCCC-CCCCEEEEE
Q ss_conf 551008--------8007986330004766058831657777787998-610226999623035134557-887267872
Q gi|254781054|r 70 HSPEDV--------SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA-HAASRFIVIGDESKRVDFLGR-GMLPIEIDQ 139 (231)
Q Consensus 70 ~~l~~~--------~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva-~~a~~~I~i~D~sK~v~~Lg~-~plPVEV~p 139 (231)
.-..+. ..+|..+=|||-|..|+.++--=|-..+= ++| ....-|++++..+|+....-. ...|+|--+
T Consensus 237 tlI~Dsa~~~~m~~~~vd~VivGAd~I~~nG~v~nkiGT~~iA--l~Ak~~~vPvyV~a~s~Kf~~~~~~~~~~~~e~~~ 314 (374)
T 2yvk_A 237 TLITDSMAAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLA--ILANAFDIPFFVAAPLSTFDTKVKCGADIPIEERD 314 (374)
T ss_dssp EEECGGGHHHHHHHTTCCEEEECCSEEETTCCEEEETTHHHHH--HHHHHTTCCEEEECCGGGEETTCSSGGGSCCCBCC
T ss_pred EEEECCCHHHHHHHCCCCEEEECCEEEECCCCCCCCCCHHHHH--HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 8997230788765136544875222785489700344388999--99987088589980346647677885534152478
No 33
>>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Porphyromonas gingivalis W83} (A:221-506)
Probab=94.62 E-value=0.067 Score=32.20 Aligned_cols=112 Identities=14% Similarity=0.040 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEE-----------------------EEC-HHHHHHH
Q ss_conf 99999999983899789988791789999999999873-2870489-----------------------618-8999999
Q gi|254781054|r 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQV-----------------------IPS-SRNTENF 61 (231)
Q Consensus 7 K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~-----------------------v~t-S~~t~~~ 61 (231)
+++.+.+|..+++||.++=+|.|+-.......|+++.. .++.+.. +.+ ..-...+
T Consensus 18 ~e~~~~~aAr~i~DG~~~q~GiG~~~~ava~~La~~~~a~~l~~~~e~g~~~~~~l~~~g~l~~~~~~~~~~~~~g~~~~ 97 (286)
T 2nvv_A 18 FLVSEXKAGRIPKDFLPLQSGVGNVANAVLGALGDNPDIPAFNXYTEVIQDAVIALXKKGRIKFASGCSLSVSRSVIQDI 97 (286)
T ss_dssp HHHHHHHHTSSCTTCCCEEECSSHHHHHHHHHHHHCTTSCCEEEECSEECHHHHHHHHTTSEEEEEESEECCCHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHCCCEECCCCCCEEECHHHHHHH
T ss_conf 88765312334556650541466781699997511777545321137755221345418855320375076548899999
Q ss_pred HHH-------CCCCCCCCC-----CCCEEEEEECCHHCCCCCCEE----------EECCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 873-------157865510-----088007986330004766058----------8316577777879986102269996
Q gi|254781054|r 62 CKI-------HHIPLHSPE-----DVSSVDLSIDGFDEIDSRLRL----------IKGYGGALLREKIIAHAASRFIVIG 119 (231)
Q Consensus 62 a~~-------~gi~~~~l~-----~~~~iDi~iDGaDevd~~l~l----------IKGgGgAl~rEKiva~~a~~~I~i~ 119 (231)
... ..++..... .....|++|-||=|||..+|. +.|.||+.-- +..|++.|++.
T Consensus 98 ~~~~~~n~~~~~~~~~~~~~~~~~~~g~~d~~ilga~qID~~GnvN~~~ig~~~~~~G~GG~~d~----~~~a~~sii~~ 173 (286)
T 2nvv_A 98 YANLDFFKDKILLRPQEYSNNPEIVRRLGVITINTALEADIFGNINSTHVSGTRXXNGIGGSGDF----TRNSYVSIFTT 173 (286)
T ss_dssp HTCHHHHTTTEEECBHHHHTCHHHHHHHTCEEEEECSEEETTSCEECSEETTTEECSCCTTHHHH----HHHSSSEEEEC
T ss_pred HHHHHHCCCCEEECCEEECCCHHHHCCCCCEEEEEHHHHCCCCCEEEEECCCCCEEECCCCHHHH----HCCCCEEEEEE
T ss_conf 98598606765765322328799971688489711221356776756743897167047760345----25787079995
Q ss_pred EHH
Q ss_conf 230
Q gi|254781054|r 120 DES 122 (231)
Q Consensus 120 D~s 122 (231)
-.+
T Consensus 174 ~~~ 176 (286)
T 2nvv_A 174 PSV 176 (286)
T ss_dssp CSE
T ss_pred EEE
T ss_conf 324
No 34
>>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} (A:188-448)
Probab=94.54 E-value=0.081 Score=31.68 Aligned_cols=90 Identities=18% Similarity=0.201 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCC------------------
Q ss_conf 99999999999838997899887917899999999998732870489618899999987315------------------
Q gi|254781054|r 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH------------------ 66 (231)
Q Consensus 5 ~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~g------------------ 66 (231)
+.+++.|+.++.+|+||.++=+|.|++......+|.+.............+......+...+
T Consensus 6 ~~~~~Ia~~~A~~i~dG~~i~~GiG~~~~ava~~L~~~~~l~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~ 85 (261)
T 3gk7_A 6 EVEAAIGKHCASLIEDGSTLQLGIGAIPDAVLSQLKDKKHLGIHSEMISDGVVDLYEAGVIDCSQKSIDKGKMAITFLMG 85 (261)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEBCSSHHHHHHHHTCTTCCSBEEEEEEECHHHHHHHHTTSBCCTTCSSSTTSEEEEEECS
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHCEECCCEEECCCCC
T ss_conf 03567899998754456752111235999999863206740367556320300365378725553423257146603354
Q ss_pred ----------CCC-----------CCCCCCCEEEEEECCHHCCCCCCEE
Q ss_conf ----------786-----------5510088007986330004766058
Q gi|254781054|r 67 ----------IPL-----------HSPEDVSSVDLSIDGFDEIDSRLRL 94 (231)
Q Consensus 67 ----------i~~-----------~~l~~~~~iDi~iDGaDevd~~l~l 94 (231)
-+- ...-.-..+|++|-||=|||..+|+
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~d~~ilga~qID~~Gnv 134 (261)
T 3gk7_A 86 TKRLYDFAANNPKVELKPVDYINHPSVVAQCSKMVCINACLQVDFMGQI 134 (261)
T ss_dssp CHHHHHHHTTCTTEEECBHHHHTCHHHHTTSTTEEEEEECSEEETTCCE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCEEEEEEEEEECCCEE
T ss_conf 7888888734855266232114676776135750787312575038617
No 35
>>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein structure initiative; HET: COA; 2.40A {Shewanella oneidensis mr-1} (A:182-436)
Probab=94.22 E-value=0.1 Score=31.04 Aligned_cols=87 Identities=11% Similarity=0.017 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHH-HHHHHHCCCCC-------------
Q ss_conf 8999999999998389978998879178999999999987328704896188999-99987315786-------------
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT-ENFCKIHHIPL------------- 69 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t-~~~a~~~gi~~------------- 69 (231)
.+.|++.|+.++++|++|.++=+|.|+|......+|.++. +..++..+... ..++.+.|.-.
T Consensus 6 ~~~~~~Ia~~~A~~i~dG~~l~~GiG~~~~ava~~L~~~~----~l~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 81 (255)
T 2oas_A 6 DAVSLAIGQHVAELVRDGDCLQXGIGAIPDAVLSCLTGHK----DLGVHTELFSDGILQLVEKGVINNTKKRFYPGKLVT 81 (255)
T ss_dssp CHHHHHHHHHHHHHCCTTCEEECCSSHHHHHHHHTCTTCC----SBEEBCSEECHHHHHHHHTTSBCCTTCSSSTTSEEE
T ss_pred CHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCC----CCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEE
T ss_conf 4699999999998753787476424742689999775158----841576332232437775886354212210571378
Q ss_pred ---------------------CC--------CCCCCEEEEEECCHHCCCCCCEE
Q ss_conf ---------------------55--------10088007986330004766058
Q gi|254781054|r 70 ---------------------HS--------PEDVSSVDLSIDGFDEIDSRLRL 94 (231)
Q Consensus 70 ---------------------~~--------l~~~~~iDi~iDGaDevd~~l~l 94 (231)
.. .-...++|++|=|+=|||..+|.
T Consensus 82 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~ailga~qID~~Gnv 135 (255)
T 2oas_A 82 GFALGSQKLYDYVDDNPAVIFXDIEQVNDTSIIRKNPNVXAINSALQVDLTGQV 135 (255)
T ss_dssp SEECSCHHHHHHHTTCTTEEECCHHHHTCHHHHTTSTTEEEEECCSEEETTCCE
T ss_pred EECCCHHHHHHHHHCCCCEEECCHHHHCCCHHHHCCCCCEEEEEHHHHHCCCEE
T ss_conf 753889999866755784897167871370655324573798412322236706
No 36
>>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Porphyromonas gingivalis W83} (A:1-220)
Probab=94.04 E-value=0.029 Score=34.47 Aligned_cols=140 Identities=16% Similarity=0.177 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHCCCCCEEEECC--CH-HHHHHHHHHHHHHHCCCE----------------------------EEEEE--
Q ss_conf 9999999998389978998879--17-899999999998732870----------------------------48961--
Q gi|254781054|r 7 KRNAARRAIQYVVDGMTLGMGT--GS-TAKEFMILLADKIANGFR----------------------------VQVIP-- 53 (231)
Q Consensus 7 K~~~a~~A~~~v~~gmviGlGt--GS-Tv~~~i~~L~~~~~~~~~----------------------------i~~v~-- 53 (231)
|..-+.+|+++|++|++|.+|. ++ +-..++++|.++..+.++ +....
T Consensus 4 K~~s~~eA~~~I~~G~~I~~gG~~~~~~P~~l~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (220)
T 2nvv_A 4 RFITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGXFTGASTGARLDGVLAQADAVKFRTPY 83 (220)
T ss_dssp CBCCHHHHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESC
T ss_pred CEEEHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 71559999964999799998688887686999999999999745678772389987235476433232458958999746
Q ss_pred -CHHHHHHHHHHCCCCCCCCC---------C--CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEH
Q ss_conf -88999999873157865510---------0--88007986330004766058831657777787998610226999623
Q gi|254781054|r 54 -SSRNTENFCKIHHIPLHSPE---------D--VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121 (231)
Q Consensus 54 -tS~~t~~~a~~~gi~~~~l~---------~--~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~ 121 (231)
.+...+...++-.+...+.. . ...+|+++=-+-..|.++|+-=|+.+...+ -++.+|++.|+-+.+
T Consensus 84 ~~~~~~R~~~~~g~i~~~p~~~~~~~~~~r~~~~~~pDVa~i~vs~~D~~G~~~lg~~~~~~~--~~~~~A~~VIvevn~ 161 (220)
T 2nvv_A 84 QSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILP--TICRLADRIIVELND 161 (220)
T ss_dssp CCCHHHHHHHHTTSSEECCCCGGGHHHHHHTTSSCCCCEEEEEESEECTTSEEECCSBCBTHH--HHHHHCSEEEEEEET
T ss_pred CCCHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCCHH--HHHHHCCEEEEEEEC
T ss_conf 789999999986983898355356999998457789978999998078788774425756479--999748989999754
Q ss_pred HHCCCC--CCC----CC-CCEEEEECCHHHHHHHHH
Q ss_conf 035134--557----88-726787257589999998
Q gi|254781054|r 122 SKRVDF--LGR----GM-LPIEIDQFGVNKTLSALK 150 (231)
Q Consensus 122 sK~v~~--Lg~----~p-lPVEV~p~~~~~v~~~l~ 150 (231)
.+++ .+. .| .|++.++.+...+-+++.
T Consensus 162 --~vp~~~~~~~~i~i~~~~vd~~~~~p~~~d~~I~ 195 (220)
T 2nvv_A 162 --KHPKEIXGXHDLCEPLDPPARRELPVYTPSDRIG 195 (220)
T ss_dssp --TSCGGGTTSBCBCCCCCTTSCCCCCCSSTTCCCS
T ss_pred --CCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCC
T ss_conf --6656556655542245677566855041232106
No 37
>>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} (A:)
Probab=93.64 E-value=0.075 Score=31.89 Aligned_cols=69 Identities=9% Similarity=-0.001 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHHHHCC-C---EEEEEEC-------HHHHHHHHHHCCCC
Q ss_conf 8999999999998----389978998879178999999999987328-7---0489618-------89999998731578
Q gi|254781054|r 4 LQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIANG-F---RVQVIPS-------SRNTENFCKIHHIP 68 (231)
Q Consensus 4 ~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~~~~~-~---~i~~v~t-------S~~t~~~a~~~gi~ 68 (231)
++..+.+|+.|.+ .++++++||+++|+|...+.+.+.+..+.. . ...++++ ..-...++...+.+
T Consensus 36 ~~~~~~ia~~aa~~l~~~l~~~~~igvs~G~T~~~~~~~l~~~~~~~~i~~v~l~G~~~~~~~~~~~~~~~~la~~~~~~ 115 (255)
T 2okg_A 36 PWVKKEXGRAAVACXKKRFSGKNIVAVTGGTTIEAVAEXXTPDSKNRELLFVPARGGLGEDVKNQANTICAHXAEKASGT 115 (255)
T ss_dssp THHHHHHHHHHHHHHHHHCCSEEEEEECCSHHHHHHHHHCCCCTTCCEEEEEESEEECC---CCHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 69999999999999998667998899955789999999720205688707996566678887759999999999984996
Q ss_pred CCCC
Q ss_conf 6551
Q gi|254781054|r 69 LHSP 72 (231)
Q Consensus 69 ~~~l 72 (231)
...+
T Consensus 116 ~~~l 119 (255)
T 2okg_A 116 YRLL 119 (255)
T ss_dssp ECCC
T ss_pred EEEE
T ss_conf 0201
No 38
>>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Porphyromonas gingivalis W83} (A:188-439)
Probab=93.44 E-value=0.25 Score=28.61 Aligned_cols=87 Identities=14% Similarity=0.059 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH-HHHHCCCCC------------C
Q ss_conf 899999999999838997899887917899999999998732870489618899999-987315786------------5
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN-FCKIHHIPL------------H 70 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~-~a~~~gi~~------------~ 70 (231)
.+.|+..|+.++++|++|.++=+|.||+......+|.+ ..++.++........ +..+.|... .
T Consensus 6 ~~~~~~Ia~~~A~~i~dG~~l~lGiG~~~~ava~~L~~----~~~l~v~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 81 (252)
T 3d3u_A 6 SDLELRIGQNCASLIKDGDTLQLGIGGIPDAVLRALEG----HKDLGIHTEMFTDGVMRMIRKGIINGKKKTLHPEKVVT 81 (252)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEECSSHHHHHHHHTTTT----CCSBEEECSCBCHHHHHHHHHTCBCCSSCSSSTTSEEE
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCC----CCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEE
T ss_conf 75776545667776404426662698088999976134----66654255042001676876887256202311672354
Q ss_pred ----------------------CC--------CCCCEEEEEECCHHCCCCCCEE
Q ss_conf ----------------------51--------0088007986330004766058
Q gi|254781054|r 71 ----------------------SP--------EDVSSVDLSIDGFDEIDSRLRL 94 (231)
Q Consensus 71 ----------------------~l--------~~~~~iDi~iDGaDevd~~l~l 94 (231)
+. -.....|++|=||=|||..+|.
T Consensus 82 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~a~qvD~~G~v 135 (252)
T 3d3u_A 82 SLIFGSKELYDFVNNNPVIECYPVDYINNPDVIGKNDRMVSINSCLEMDLMGQA 135 (252)
T ss_dssp SBBCCCHHHHHHHTTCTTEEECBHHHHTCHHHHHHSSSEEEEECCSCEETTSCC
T ss_pred CCCCCHHHHHHHHHCCCCEEECHHHCCCCHHHHHCCCCCEEEECHHHCCCCCCE
T ss_conf 214798999976646745555204304798998387874898113330888766
No 39
>>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.70A {Vibrio fischeri ES114} (A:)
Probab=93.10 E-value=0.15 Score=30.05 Aligned_cols=67 Identities=9% Similarity=0.024 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHHHHCCC----EEEEEECH-------HHHHHHHHHCCC
Q ss_conf 78999999999998----3899789988791789999999999873287----04896188-------999999873157
Q gi|254781054|r 3 ALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIANGF----RVQVIPSS-------RNTENFCKIHHI 67 (231)
Q Consensus 3 ~~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~----~i~~v~tS-------~~t~~~a~~~gi 67 (231)
.+++.+.+|+.|++ +++++++||+++|+|...+.+.|....+... ...++|.+ .-.+.++...|.
T Consensus 34 ~~~~~~~la~~aa~~l~~~l~~~~~igvs~G~T~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~i~~~la~~~~~ 113 (267)
T 3kv1_A 34 TNEQRKQVAALVSSYLNNNLQEGXAVAVGQGQNVAAVADHAGIVTQRNARFVSAIGGTHRSGDIINADHICRRLAKKYGG 113 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHCCCCCCCCCCEEEESBCBCC----CCCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 36999999999999999757689889994788999999835766778956994688767776756899999999998299
Q ss_pred CC
Q ss_conf 86
Q gi|254781054|r 68 PL 69 (231)
Q Consensus 68 ~~ 69 (231)
+-
T Consensus 114 ~~ 115 (267)
T 3kv1_A 114 SS 115 (267)
T ss_dssp EE
T ss_pred EE
T ss_conf 89
No 40
>>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae TIGR4} (A:)
Probab=92.65 E-value=0.26 Score=28.51 Aligned_cols=41 Identities=15% Similarity=0.261 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHH
Q ss_conf 878999999999998----38997899887917899999999998
Q gi|254781054|r 2 DALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADK 42 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~ 42 (231)
|.+++.+.+|..|++ .++++++||+++|+|...+.++|...
T Consensus 35 ~~~~~~~~va~~aa~~l~~~~~~~~~igis~G~t~~~~~~~l~~~ 79 (266)
T 2gnp_A 35 TPTILSERISQVAAGVLRNLIDDNXKIGFSWGKSLSNLVDLIHSK 79 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCC
T ss_conf 767899999999999999747899989982688899999971644
No 41
>>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural genomics, PSI, protein structure initiative; 2.10A {Pseudomonas aeruginosa} (A:1-225)
Probab=92.65 E-value=0.054 Score=32.80 Aligned_cols=144 Identities=14% Similarity=0.110 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECC--C-HHHHHHHHHHHHHHH-CCCEEEE-------------------------EEC
Q ss_conf 8999999999998389978998879--1-789999999999873-2870489-------------------------618
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMTLGMGT--G-STAKEFMILLADKIA-NGFRVQV-------------------------IPS 54 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmviGlGt--G-STv~~~i~~L~~~~~-~~~~i~~-------------------------v~t 54 (231)
.+.|..-+.+|+++|+||++|.+|. + .+-..++++|.++-+ +...+.. ...
T Consensus 11 ~~~K~~s~~eAv~~IkdGd~I~~gG~~~~~~P~~l~~aL~~~~~~dl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (225)
T 2g39_A 11 LLDKVXSAAEAADLIQDGXTVGXSGFTRAGEAKAVPQALAXRAKERPLRISLXTGASLGNDLDKQLTEAGVLARRXPFQV 90 (225)
T ss_dssp GGGGBCCHHHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHSCCCEEEECSSCCCTTHHHHHHHTTCEEEEESCCC
T ss_pred HHHCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 87257809999950999799998998888887999999999987568847999745578754452013797799985788
Q ss_pred HHHHHHHHHHCCCCCCCCCC-----------CCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHH
Q ss_conf 89999998731578655100-----------8800798633000476605883165777778799861022699962303
Q gi|254781054|r 55 SRNTENFCKIHHIPLHSPED-----------VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123 (231)
Q Consensus 55 S~~t~~~a~~~gi~~~~l~~-----------~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK 123 (231)
+...+....+-.+...+... ..++|+++=-+-..|.++|+-=|..+...++ .+.+|++.|+-+.+..
T Consensus 91 ~~~~r~~~~~g~i~~~p~~~~~~~~~~r~~~~~~pdv~li~~s~~D~~G~~~~g~~~~~~~~--~~~~a~~vIvevn~~v 168 (225)
T 2g39_A 91 DSTLRKAINAGEVXFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPTTSVGNSAS--FAIFAKQVIVEINLAH 168 (225)
T ss_dssp CHHHHHHHHTTSSEECCCCTTTHHHHHHTTSSCCCSEEEEEESEECTTSCEECCSBCBTHHH--HHHHSSEEEEEEETTS
T ss_pred CHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHH--HHHHCCEEEEEECCCC
T ss_conf 98999999779826878764268999984699999889999663899956985278774499--9962781799954789
Q ss_pred CCCCCCC-----CCCCEEEEECCHHHHHHHH
Q ss_conf 5134557-----8872678725758999999
Q gi|254781054|r 124 RVDFLGR-----GMLPIEIDQFGVNKTLSAL 149 (231)
Q Consensus 124 ~v~~Lg~-----~plPVEV~p~~~~~v~~~l 149 (231)
-....+. ...|++..+.....+-..+
T Consensus 169 p~~~~~~~~i~~~~~~vd~~~~~~~~~d~~I 199 (225)
T 2g39_A 169 STNLEGLHDIYIPTYRPTRTPIPLTRVDDRI 199 (225)
T ss_dssp CGGGTTSBCBCCCCCTTSCCCCCCCSTTCCC
T ss_pred CCEEECCCEEECCCCCCCCCCCCCCCCCCEE
T ss_conf 7020002202036647777664766787176
No 42
>>1xr4_A Putative citrate lyase alpha chain/citrate-ACP transferase; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium LT2} (A:26-119,A:158-238)
Probab=92.46 E-value=0.15 Score=30.10 Aligned_cols=107 Identities=19% Similarity=0.180 Sum_probs=74.7
Q ss_pred HHHHH--HCCCCCEEEE-----CCCHHHHHHHHHHHHHHHCC-CEEEEEECHHHHHH----HHHHCCCCCCCCCCCCEEE
Q ss_conf 99998--3899789988-----79178999999999987328-70489618899999----9873157865510088007
Q gi|254781054|r 12 RRAIQ--YVVDGMTLGM-----GTGSTAKEFMILLADKIANG-FRVQVIPSSRNTEN----FCKIHHIPLHSPEDVSSVD 79 (231)
Q Consensus 12 ~~A~~--~v~~gmviGl-----GtGSTv~~~i~~L~~~~~~~-~~i~~v~tS~~t~~----~a~~~gi~~~~l~~~~~iD 79 (231)
++|+. -.++||+|.. |.--|++.....|+++ | ++++.-+||...-. .-.+.| .....-+||
T Consensus 25 eeAi~~sgL~dGmTiSFHH~fR~GD~~ln~Vm~~ia~~---G~k~l~laasSl~~~h~pLvehir~G----vv~~i~~ID 97 (175)
T 1xr4_A 25 EEAIRRSGLKNGXTISFHHAFRGGDKVVNXVXAKLAEX---GFRDLTLASSSLIDAHWPLIEHIKNG----VVRQIYNID 97 (175)
T ss_dssp HHHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHHT---TCCSEEEEESCCCGGGTTHHHHHHTT----SEEEEECCS
T ss_pred HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC---CCCCEEEEECCCCCCCHHHHHHHHCC----EEEEEECCC
T ss_conf 99998649989999998467567567999999999975---98764997146777645789998668----488884688
Q ss_pred EEECCHHCCCCCCEEEECC----CHHHHHHHHHHHHHCCEEEEEEHHHCCCC
Q ss_conf 9863300047660588316----57777787998610226999623035134
Q gi|254781054|r 80 LSIDGFDEIDSRLRLIKGY----GGALLREKIIAHAASRFIVIGDESKRVDF 127 (231)
Q Consensus 80 i~iDGaDevd~~l~lIKGg----GgAl~rEKiva~~a~~~I~i~D~sK~v~~ 127 (231)
++|=||---|.-+|+=--+ =|.|=.-++=|+.|++.|.+.|. +|+.
T Consensus 98 VAFigaP~~D~~GNanG~~GksaCGsLGYA~vDA~yAd~VV~iTD~--Lvpy 147 (175)
T 1xr4_A 98 VAFLGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVLLTEE--WVEF 147 (175)
T ss_dssp EEEEEESEEETTCCEESSSSSSCCCCCTTHHHHHHHCSEEEEEESC--EECS
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECC--CCCC
T ss_conf 8999667888788640025753557257799999879969999658--8786
No 43
>>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative, eukaryotic initiation factor; 2.10A {Leishmania major} (A:)
Probab=92.33 E-value=0.88 Score=25.25 Aligned_cols=117 Identities=18% Similarity=0.069 Sum_probs=75.6
Q ss_pred HCCCCC-EEEECCCHHHHHHHHHHHHHHHCCCEEEE--EEC------HHHHHHHHHHCCCCCCCCCC--------CCEEE
Q ss_conf 389978-99887917899999999998732870489--618------89999998731578655100--------88007
Q gi|254781054|r 17 YVVDGM-TLGMGTGSTAKEFMILLADKIANGFRVQV--IPS------SRNTENFCKIHHIPLHSPED--------VSSVD 79 (231)
Q Consensus 17 ~v~~gm-viGlGtGSTv~~~i~~L~~~~~~~~~i~~--v~t------S~~t~~~a~~~gi~~~~l~~--------~~~iD 79 (231)
++.+|+ ++=.|..+||..++....+ .+....+ .-| +..++..+.+.|||+.-..+ .+.+|
T Consensus 182 ~i~~~~~iLt~~~S~tV~~~l~~A~~---~~~~~~V~v~EsrP~~eG~~~~a~~l~~~gi~vtli~Dsa~~~~~~~~~vd 258 (383)
T 2a0u_A 182 LTICNTGALATSRYGTALGVVRQLFY---DGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAASSLXLNRKID 258 (383)
T ss_dssp EECSCCSTTTSSSSCSHHHHHHHHHH---TTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHHHSCCC
T ss_pred EEEECCCCEEEECCCHHHHHHHHHHH---CCCCCEEEECCCCHHCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCC
T ss_conf 88836641165122055788899998---798637997147010142589999998626870898613277775226531
Q ss_pred EEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEE
Q ss_conf 98633000476605883165777778799861022699962303513455-78872678
Q gi|254781054|r 80 LSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEI 137 (231)
Q Consensus 80 i~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV 137 (231)
..+=|||-|..|+.++-==|-..+= -.-......|+++++..|+++..- ....|+|-
T Consensus 259 ~VlvGAd~V~~nG~v~nk~GT~~iA-l~Ak~~~vPv~v~aes~K~~~~~~~~~~~~~e~ 316 (383)
T 2a0u_A 259 AVVVGADRICQNGDTANKIGTYNLA-VSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEE 316 (383)
T ss_dssp EEEECCSEECTTCCEEEETTHHHHH-HHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCB
T ss_pred EEEEECEEEEECCCEEECCCHHHHH-HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 8987012899369862210669999-999864997799634552176779967454666
No 44
>>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism, hydrolase; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A* (A:)
Probab=92.16 E-value=0.17 Score=29.66 Aligned_cols=96 Identities=20% Similarity=0.103 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHHHCCCCC-EEEECCCHHHHHHHHHHHHHHHCCCEEEEEE--------C----H-HHHHHHHHHCCC
Q ss_conf 878999999999998389978-9988791789999999999873287048961--------8----8-999999873157
Q gi|254781054|r 2 DALQMKRNAARRAIQYVVDGM-TLGMGTGSTAKEFMILLADKIANGFRVQVIP--------S----S-RNTENFCKIHHI 67 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~~gm-viGlGtGSTv~~~i~~L~~~~~~~~~i~~v~--------t----S-~~t~~~a~~~gi 67 (231)
|.+++-+.+|+.-.+.+++|. +||++.|+|...+.+.+.+......++..++ . | ......+...++
T Consensus 9 ~~~~l~~~aA~~l~~~i~~g~~~i~is~G~T~~~~~~~~~~~~~~~~~v~~~~~~e~~~~~~~~~~s~~~~~~~~~~~~~ 88 (234)
T 2ri0_A 9 NKTEGSKVAFRMLEEEITFGAKTLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAK 88 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTHHHHHHHHTSCCCCTTCEEEESEEETTCCTTSTTSHHHHHHHHTTTTS
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999759987997897239999999997177865699995257750688746679999999740578
Q ss_pred CCCCC--------------------CCCCEEEEEECCHHCCCCCCEEEEC
Q ss_conf 86551--------------------0088007986330004766058831
Q gi|254781054|r 68 PLHSP--------------------EDVSSVDLSIDGFDEIDSRLRLIKG 97 (231)
Q Consensus 68 ~~~~l--------------------~~~~~iDi~iDGaDevd~~l~lIKG 97 (231)
+...+ ....++|+++-|.-+..+.-.+..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Diai~GiG~~g~~a~~~~~ 138 (234)
T 2ri0_A 89 PFKKSYLPNGLAADLAKETEYYDQILAQYPIDLQILGIGRNAHIGFNEPG 138 (234)
T ss_dssp CCSEEECCCTTCSCHHHHHHHHHHHHHHSCCSEEEECCCTTSCBTTBCTT
T ss_pred CHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCC
T ss_conf 73655126778889999999999897407876899813776704532556
No 45
>>1ooy_A Succinyl-COA:3-ketoacid-coenzyme A transferase, mitochondrial precursor; alpha/beta protein; 1.70A {Sus scrofa} (A:1-248)
Probab=92.09 E-value=0.12 Score=30.60 Aligned_cols=44 Identities=14% Similarity=0.097 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHCCCCCEEEECC--C-HHHHHHHHHHHHHHHCCCEEE
Q ss_conf 9999999998389978998879--1-789999999999873287048
Q gi|254781054|r 7 KRNAARRAIQYVVDGMTLGMGT--G-STAKEFMILLADKIANGFRVQ 50 (231)
Q Consensus 7 K~~~a~~A~~~v~~gmviGlGt--G-STv~~~i~~L~~~~~~~~~i~ 50 (231)
|..-+++|+++|+||++|++|. + .+...++++|+++-...+.+.
T Consensus 3 K~~s~~eAv~~I~dG~~v~~~gf~~~g~P~al~~aL~~~~~~~l~~~ 49 (248)
T 1ooy_A 3 FYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAV 49 (248)
T ss_dssp EESCHHHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHHCCCSEEEE
T ss_pred CCCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 44899999842999599998984776889999999997499970999
No 46
>>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2a str} (A:)
Probab=90.69 E-value=0.46 Score=27.01 Aligned_cols=96 Identities=10% Similarity=-0.042 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEE-----EE----C--H-HHHHHHHHHC
Q ss_conf 78999999999998----3899789988791789999999999873-2870489-----61----8--8-9999998731
Q gi|254781054|r 3 ALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQV-----IP----S--S-RNTENFCKIH 65 (231)
Q Consensus 3 ~~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~-----v~----t--S-~~t~~~a~~~ 65 (231)
.+++.+.+|+.|.+ .++++++||+++|+|...+.+.+.+..+ ...+... ++ . + .-.+.+++..
T Consensus 39 ~~~~~~~~~~~~a~~l~~~l~~~~~igis~G~t~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~ 118 (266)
T 3efb_A 39 EETQLAXXGLHGAQLLDRLLEPGDIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGGPSGKLESRYHVNTLTYSAAAKL 118 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHTCCCCSSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 16899999999999999867899999990778899999971322578895899887888765667558899999999980
Q ss_pred CCCCCCC-------------------------CCCCEEEEEECCHHCCCCCCEEEECC
Q ss_conf 5786551-------------------------00880079863300047660588316
Q gi|254781054|r 66 HIPLHSP-------------------------EDVSSVDLSIDGFDEIDSRLRLIKGY 98 (231)
Q Consensus 66 gi~~~~l-------------------------~~~~~iDi~iDGaDevd~~l~lIKGg 98 (231)
+++...+ +..+.+|+++-|.=+..+...+..++
T Consensus 119 ~~~~~~~~~p~~~~~~e~~~~~~~~~~~~~~l~~~~~~DiailGiG~~gh~~~~~p~~ 176 (266)
T 3efb_A 119 KGESHLADFPALLDNPLIRNGIXQSQHFKTISAYWDNLDIALVGIGSPAIRDGANWHA 176 (266)
T ss_dssp TCEECCCCSBSBCSSHHHHHHHHTSHHHHHHHHHHHTCSEEEECCBCCC---------
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf 8961156664247999999999858599999998744999999478787656422157
No 47
>>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae} (A:55-315)
Probab=89.54 E-value=0.33 Score=27.88 Aligned_cols=96 Identities=10% Similarity=-0.000 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEE-----EEC------H-HHHHHHHHHC
Q ss_conf 78999999999998----3899789988791789999999999873-2870489-----618------8-9999998731
Q gi|254781054|r 3 ALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQV-----IPS------S-RNTENFCKIH 65 (231)
Q Consensus 3 ~~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~-----v~t------S-~~t~~~a~~~ 65 (231)
.+++.+.+|+.|++ .+++++++|+++|+|...+.+.|.+... ....+.. ++. + .....++...
T Consensus 34 ~~~~~~~ia~~aa~~l~~~l~~~~~igi~~G~t~~~~~~~l~~~~~~~~v~~~~l~g~~~~~~~~~~~~~~i~~~la~~~ 113 (261)
T 2w48_A 34 EEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARL 113 (261)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHTTSCCCSSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 16899999999999999757789989982459999999970100467873899604776876666568899999999983
Q ss_pred CCCCCCC-------------------------CCCCEEEEEECCHHCCCCCCEEEECC
Q ss_conf 5786551-------------------------00880079863300047660588316
Q gi|254781054|r 66 HIPLHSP-------------------------EDVSSVDLSIDGFDEIDSRLRLIKGY 98 (231)
Q Consensus 66 gi~~~~l-------------------------~~~~~iDi~iDGaDevd~~l~lIKGg 98 (231)
+.+...+ +...++|+++-|.-+..+...+..++
T Consensus 114 ~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diai~GiG~~g~~~~~~~~~ 171 (261)
T 2w48_A 114 KAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHA 171 (261)
T ss_dssp TCEECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCBCTTCCSSSCHHH
T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHCC
T ss_conf 8962055665458999999999967379999999984898999447766676402305
No 48
>>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural genomics, PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} (A:)
Probab=87.91 E-value=0.86 Score=25.30 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHH----HCCCCCEEEECC-CHHHHHHHHHHHHHHHCCCEEEEE-----EC-------HHHHHHHHHH
Q ss_conf 878999999999998----389978998879-178999999999987328704896-----18-------8999999873
Q gi|254781054|r 2 DALQMKRNAARRAIQ----YVVDGMTLGMGT-GSTAKEFMILLADKIANGFRVQVI-----PS-------SRNTENFCKI 64 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~----~v~~gmviGlGt-GSTv~~~i~~L~~~~~~~~~i~~v-----~t-------S~~t~~~a~~ 64 (231)
+.+++.+.+|+.|.+ .+++++++|+++ |+|+..+++.+........++.++ +. +...+.++..
T Consensus 35 ~~~~~~~~va~~aa~~l~~~l~~~~~i~i~~ggt~~~~~~~~~~~~~~~~~~v~~v~~~g~~~~~~~~~~~~~~~~la~~ 114 (264)
T 2r5f_A 35 DEESIKQAIGSAAAHYLETSLSAQDHIGISSWSSTIRAXVSHXHPQPGKQSAQEVVQLLGGVGNKGAFEATLLTQRLATL 114 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCTTCEEEECTTCHHHHHHHHTCCC--CCCCCSEEEECEECCC--CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 75899999999999999986665987999758579999998627566666882599605888888875899999999987
Q ss_pred CCCCCCC
Q ss_conf 1578655
Q gi|254781054|r 65 HHIPLHS 71 (231)
Q Consensus 65 ~gi~~~~ 71 (231)
.+.+...
T Consensus 115 ~~~~~~~ 121 (264)
T 2r5f_A 115 LNCPAFL 121 (264)
T ss_dssp HTSCEEC
T ss_pred CCCCEEE
T ss_conf 2971796
No 49
>>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomics, montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli O157} (A:1-270,A:379-405)
Probab=87.87 E-value=0.28 Score=28.38 Aligned_cols=47 Identities=28% Similarity=0.350 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHCCCCCEEEECC---C-HHHHHHHHHHHHHHHC-C--CEEEEE
Q ss_conf 99999999998389978998879---1-7899999999998732-8--704896
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMTLGMGT---G-STAKEFMILLADKIAN-G--FRVQVI 52 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmviGlGt---G-STv~~~i~~L~~~~~~-~--~~i~~v 52 (231)
.|..-++.|+.+|+||++|++|. | ++-..++++|+++..+ + .+++.+
T Consensus 13 ~K~~t~~EAv~~IkdGd~I~~gGf~~~~g~P~al~~aL~~r~~~~~~~kdLt~i 66 (297)
T 2ahu_A 13 VPVLSAQEAVNYIPDEATLCVLGAGGGILEATTLITALADKYKQTQTPRNLSII 66 (297)
T ss_dssp CCBCCHHHHHTTCCTTCEEEECCCBTTTTCCHHHHHHHHHHHHHHCCSCSEEEE
T ss_pred CCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 541209999964999699998477677779899999999989963899763999
No 50
>>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural genomics, PSI, protein structure initiative; 2.10A {Pseudomonas aeruginosa} (A:226-497)
Probab=85.77 E-value=1.4 Score=23.95 Aligned_cols=110 Identities=18% Similarity=0.132 Sum_probs=61.2
Q ss_pred HHCCCCCEEEECCCHHHHHHHHHHHHHHHCCC--E----------------EEE-----EEC-HHHHHHHHH---H-CCC
Q ss_conf 83899789988791789999999999873287--0----------------489-----618-899999987---3-157
Q gi|254781054|r 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGF--R----------------VQV-----IPS-SRNTENFCK---I-HHI 67 (231)
Q Consensus 16 ~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~--~----------------i~~-----v~t-S~~t~~~a~---~-~gi 67 (231)
.+++||.++=+|.|+--......|.+..+..+ . ++. +.. ..-+..... . -.+
T Consensus 27 r~i~DG~~i~~GiG~ip~a~~~~l~~~~~~~L~~~s~~~~~~~~~l~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~n~~~ 106 (272)
T 2g39_A 27 RXSNSLGPLQAGIGSIANAVXCGLIESPFENLTXYSEVLQDSTFDLIDAGKLRFASGSSITLSPRRNADVFGNLERYKDK 106 (272)
T ss_dssp SSCTTCSCEEECSSHHHHHHHHGGGSSSCCSEEEECSEECHHHHHHHHTTCEEEEEESEECCCHHHHHHHHHSGGGTGGG
T ss_pred HCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCE
T ss_conf 11577850010546248999999874486573788653004440010066522566873897741229998509867870
Q ss_pred CCCCCC--------CCCEEEEEECCHHCCCCCCEE----E------ECCCHHHHHHHHHHHHHCCEEEEEEH-------H
Q ss_conf 865510--------088007986330004766058----8------31657777787998610226999623-------0
Q gi|254781054|r 68 PLHSPE--------DVSSVDLSIDGFDEIDSRLRL----I------KGYGGALLREKIIAHAASRFIVIGDE-------S 122 (231)
Q Consensus 68 ~~~~l~--------~~~~iDi~iDGaDevd~~l~l----I------KGgGgAl~rEKiva~~a~~~I~i~D~-------s 122 (231)
...+.+ ....+|++|-||=|||..+|+ | .|-||+.= ++..|++.|++..+ +
T Consensus 107 ~~~~~~~~~~~~~~~~g~~d~~ilga~qVD~~GnvN~~~ig~~~~~~G~GG~~D----~~~~a~~sii~~~~~~~~g~~~ 182 (272)
T 2g39_A 107 LVLRPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVGGTKXXNGIGGSGD----FARNAHLAIFVTKSIAKGGNIS 182 (272)
T ss_dssp EEECBHHHHTCHHHHHHHTCEEEEECSEEETTSCEESSEETTTEECSCCTTHHH----HHHHCSEEEEECCSEEGGGTEE
T ss_pred EEECCHHCCCCHHHHHCCCCEEEEEHHHHCCCCCEEEEECCCCEEEECCCCCHH----HCCCCCEEEEECCCCCCCCCCC
T ss_conf 871625406879997167808981012227777477865389617704786033----4257773899720203899867
Q ss_pred HCCCCCC
Q ss_conf 3513455
Q gi|254781054|r 123 KRVDFLG 129 (231)
Q Consensus 123 K~v~~Lg 129 (231)
|+|+.++
T Consensus 183 ~iV~~v~ 189 (272)
T 2g39_A 183 SVVPXVS 189 (272)
T ss_dssp SEESSCS
T ss_pred EECCCCC
T ss_conf 1716998
No 51
>>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein structure initiative; HET: CIT; 2.70A {Streptococcus mutans UA159} (A:242-487)
Probab=83.41 E-value=3.5 Score=21.54 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=70.0
Q ss_pred HHHHHHHHHHH------HHCCCCCEEEECCCHHHHHHHHHHHHHHH-CCCEEE------------------------EEE
Q ss_conf 99999999999------83899789988791789999999999873-287048------------------------961
Q gi|254781054|r 5 QMKRNAARRAI------QYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQ------------------------VIP 53 (231)
Q Consensus 5 ~~K~~~a~~A~------~~v~~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~------------------------~v~ 53 (231)
+..++.|+.++ .+|++|..+=+|.|+--.....++.++-. ...... ..+
T Consensus 10 ~~~~~Ia~~~a~~i~~~~~v~dG~~i~~GiG~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~G~~~~~~~~~~ 89 (246)
T 2hj0_A 10 PKELLIAEYAAKVITSSPYYKEGFSFQTGTGGASLAVTRFXREQXIKDDIKANFALGGITNAXVELLEEGLVDKILDVQD 89 (246)
T ss_dssp HHHHHHHHHHHHHHHTSTTCSTTCEEECCSSHHHHHHHHHHHHHHHHSCCCEEEECSEECHHHHHHHHTTSEEEEEESEE
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 18899999999998626656898665405650689999998754231473578872764605688886586022334111
Q ss_pred CHHHHHHHHHHCCCC------------CCCCCCCCEEEEEECCHHCCCCCCEE----E------ECCCHHHHHHHHHHHH
Q ss_conf 889999998731578------------65510088007986330004766058----8------3165777778799861
Q gi|254781054|r 54 SSRNTENFCKIHHIP------------LHSPEDVSSVDLSIDGFDEIDSRLRL----I------KGYGGALLREKIIAHA 111 (231)
Q Consensus 54 tS~~t~~~a~~~gi~------------~~~l~~~~~iDi~iDGaDevd~~l~l----I------KGgGgAl~rEKiva~~ 111 (231)
.+..+..+....--+ ...+.....+|++|-||=|||..+|. | .|-||+.-- +..
T Consensus 90 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ilga~qVD~~GnvNs~~i~~~~~~~G~GG~~D~----~~~ 165 (246)
T 2hj0_A 90 FDHPSAVSLDRNAEKHYEIDANXYASPLSKGSVINQLDICVLSALEVDTNFNVNVXTGSDGVIRGASGGHCDT----AFA 165 (246)
T ss_dssp SSHHHHHHHHHTTTTEEECCHHHHHCSSSSCCGGGGCSEEEECCSEECTTCCEECSBCTTCCBCCBCTTHHHH----HHH
T ss_pred CCCCCHHHHHCCCCCCEEECHHHHCCCCCCHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCEECCCCCHHHH----HHC
T ss_conf 1322145652268872687535504887740312366727852000002673689972799675156518888----740
Q ss_pred HCCEEEEEEHHH
Q ss_conf 022699962303
Q gi|254781054|r 112 ASRFIVIGDESK 123 (231)
Q Consensus 112 a~~~I~i~D~sK 123 (231)
|++.|++.-.+|
T Consensus 166 a~~~i~~~~~~~ 177 (246)
T 2hj0_A 166 AKXSLVISPLVR 177 (246)
T ss_dssp SSEEEEECCSEE
T ss_pred CCCEEEEECCCC
T ss_conf 175899932468
No 52
>>2o0m_A Transcriptional regulator, SORC family; structural genomics, PSI-2, protein structure initiative; 1.60A {Enterococcus faecalis V583} (A:)
Probab=82.89 E-value=1.2 Score=24.46 Aligned_cols=65 Identities=8% Similarity=0.021 Sum_probs=38.5
Q ss_pred HHHHHHHHHHH----HHCCCC-CEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEC------------HHHHHHHHHHCCC
Q ss_conf 99999999999----838997-899887917899999999998732870489618------------8999999873157
Q gi|254781054|r 5 QMKRNAARRAI----QYVVDG-MTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------------SRNTENFCKIHHI 67 (231)
Q Consensus 5 ~~K~~~a~~A~----~~v~~g-mviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~t------------S~~t~~~a~~~gi 67 (231)
+..+.+|+.|. +.+++| +++|++.|+|...+.+.+........++++++. +..+...+...+-
T Consensus 122 ~~~~~la~~aa~~l~~~i~~~~~~ig~sgG~T~~~l~~~l~~~~~~~~~v~vv~l~g~~~~~~~~~sn~~~~~~a~~~~~ 201 (345)
T 2o0m_A 122 KVLSDFGDVLTNTLNLLLPNGENTIAVXGGTTXAXVAENXGSLETEKRHNLFVPARGGIGEAVSVQANSISAVXANKTGG 201 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEECCSHHHHHHHHTCCCCCCSSEEEEEEESBSCCCCCGGGSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 99999999999999986335985999946799999999704236786517996156667888775688999999865189
Q ss_pred CC
Q ss_conf 86
Q gi|254781054|r 68 PL 69 (231)
Q Consensus 68 ~~ 69 (231)
+.
T Consensus 202 ~~ 203 (345)
T 2o0m_A 202 NY 203 (345)
T ss_dssp EE
T ss_pred CE
T ss_conf 60
No 53
>>1ujn_A Dehydroquinate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus HB8} (A:1-160)
Probab=77.86 E-value=5.1 Score=20.50 Aligned_cols=45 Identities=13% Similarity=0.064 Sum_probs=24.2
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
Q ss_conf 8997899887917899999999998732870489618899999987
Q gi|254781054|r 18 VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63 (231)
Q Consensus 18 v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~ 63 (231)
-+...+|++|+||..... ++++.....+.....|||+..+...+.
T Consensus 83 ~~~d~ivavGGGs~~D~a-K~~a~~~~~~~p~i~vPTt~~~~~~~s 127 (160)
T 1ujn_A 83 PRNATLLVVGGGTLTDLG-GFVAATYLRGVAYLAFPTTTLAIVDAS 127 (160)
T ss_dssp CTTCEEEEEESHHHHHHH-HHHHHHBTTCCEEEEEECSHHHHHTTT
T ss_pred CCCCCEEEECCHHHHHHH-HHHHHHHCCCCCEECCCCCHHHCCCCC
T ss_conf 356643685246666788-887653137850331565065403223
No 54
>>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A (A:)
Probab=74.42 E-value=5.9 Score=20.12 Aligned_cols=79 Identities=16% Similarity=0.071 Sum_probs=52.8
Q ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEC
Q ss_conf 57887267872575899999986322148985-03772258863625788889982079868989999996279968664
Q gi|254781054|r 129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNE-ELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEH 207 (231)
Q Consensus 129 g~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~-~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~ 207 (231)
..||+-++|.-...+-.+..+-..+...+.+- .+..... -+.+...+++.-.+...+..+-.+|+++|||.+.
T Consensus 2 t~y~~~l~v~~~DrpGlL~~It~~la~~~inI~~i~~~~~------~~~~~~~~~v~v~d~~~l~~ii~~l~~i~~V~~V 75 (88)
T 2ko1_A 2 TDFLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK------DGIFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTV 75 (88)
T ss_dssp CCEEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHTTCTTEEEE
T ss_pred CEEEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEEC------CCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEE
T ss_conf 2679999999966878899999999987982999999826------9989999999999999999999999779998789
Q ss_pred CEECCC
Q ss_conf 802476
Q gi|254781054|r 208 GLFINM 213 (231)
Q Consensus 208 GlF~~~ 213 (231)
-...+.
T Consensus 76 ~r~~~~ 81 (88)
T 2ko1_A 76 ERLSNL 81 (88)
T ss_dssp EEECSC
T ss_pred EEEEEE
T ss_conf 998612
No 55
>>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription factor, RNA polymerase recycling, activator, ATP-binding, DNA-binding; 3.20A {Escherichia coli K12} (A:150-424,A:686-712)
Probab=73.05 E-value=2.8 Score=22.11 Aligned_cols=64 Identities=11% Similarity=0.072 Sum_probs=34.7
Q ss_pred HHHHHHHHCCCCCEEE--ECCCHHHHH--HHHHHHHHHHCCCEEEEEECHHHHHHH---HHHCCCCCCCCC
Q ss_conf 9999998389978998--879178999--999999987328704896188999999---873157865510
Q gi|254781054|r 10 AARRAIQYVVDGMTLG--MGTGSTAKE--FMILLADKIANGFRVQVIPSSRNTENF---CKIHHIPLHSPE 73 (231)
Q Consensus 10 ~a~~A~~~v~~gmviG--lGtGSTv~~--~i~~L~~~~~~~~~i~~v~tS~~t~~~---a~~~gi~~~~l~ 73 (231)
++..++..=..+..+. .|+|-|... ++.++-.+-..+.-+.++|+|...... ....+++.....
T Consensus 12 av~~~~~~~~~~~lLad~~G~GKT~~ai~~~~~l~~~~~~~~vLIv~P~~l~~qW~~E~~~~~~~~~~~~~ 82 (302)
T 3dmq_A 12 IAHDVGRRHAPRVLLADEVGLGKTIEAGXILHQQLLSGAAERVLIIVPETLQHQWLVEXLRRFNLRFALFD 82 (302)
T ss_dssp HHHHHHHSSSCEEEECCCTTSCHHHHHHHHHHHHHHTSSCCCEEEECCTTTHHHHHHHHHHHSCCCCEECC
T ss_pred HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 99999847799999987996359999999999999838999689998878899999999997299869982
No 56
>>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 1.96A {Novosphingobium aromaticivorans DSM12444} (A:124-302)
Probab=72.76 E-value=7.3 Score=19.56 Aligned_cols=88 Identities=18% Similarity=0.162 Sum_probs=53.2
Q ss_pred HHHHHHH-H--HCCCCCEE-EECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCC-----------CC
Q ss_conf 9999999-8--38997899-88791789999999999873287048961889999998731578655-----------10
Q gi|254781054|r 9 NAARRAI-Q--YVVDGMTL-GMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHS-----------PE 73 (231)
Q Consensus 9 ~~a~~A~-~--~v~~gmvi-GlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~-----------l~ 73 (231)
..|..|+ + .+++|..| -.|.|+.+-.+...|++. +....++.++......++++|....- ..
T Consensus 13 ~TA~~al~~~~~~~~g~~vlV~ga~g~vG~~~~qla~~---~g~~v~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~ 89 (179)
T 3gaz_A 13 ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALA---RGARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHT 89 (179)
T ss_dssp HHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEECHHHHHHHHHHTSEEEETTSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCCEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHH
T ss_conf 45455455412679976323333045788999986550---586123135675432112222211000344177899985
Q ss_pred CCCEEEEEEC--CHHCCCCCCEEEECCC
Q ss_conf 0880079863--3000476605883165
Q gi|254781054|r 74 DVSSVDLSID--GFDEIDSRLRLIKGYG 99 (231)
Q Consensus 74 ~~~~iDi~iD--GaDevd~~l~lIKGgG 99 (231)
....+|+.|| |.+.....+.+++-+|
T Consensus 90 ~~~g~d~v~d~~g~~~~~~~~~~l~~~G 117 (179)
T 3gaz_A 90 AGQGFDLVYDTLGGPVLDASFSAVKRFG 117 (179)
T ss_dssp TTSCEEEEEESSCTHHHHHHHHHEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHCCCCC
T ss_conf 6998169998998365665544305786
No 57
>>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} (A:146-317)
Probab=71.81 E-value=7.6 Score=19.42 Aligned_cols=61 Identities=18% Similarity=0.058 Sum_probs=45.8
Q ss_pred HHHHHHHH--HCCCC-CEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCC
Q ss_conf 99999998--38997-89988791789999999999873287048961889999998731578655
Q gi|254781054|r 9 NAARRAIQ--YVVDG-MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHS 71 (231)
Q Consensus 9 ~~a~~A~~--~v~~g-mviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~ 71 (231)
..|..|++ .+++| .++-.|.|...-.+++.++.. .+..+.++..|.....+++++|....-
T Consensus 13 ~ta~~al~~~~~~~g~~VlV~Gagg~g~~a~~~~~~~--g~~~Vi~~~~~~~~~~~~~~~g~~~~~ 76 (172)
T 1pl8_A 13 SVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGADLVL 76 (172)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHCCCEEEE
T ss_conf 9999999961999989999989880255568899867--987999956988999999864980998
No 58
>>2p8t_A Hypothetical protein PH0730; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.80A {Pyrococcus horikoshii OT3} (A:)
Probab=71.23 E-value=0.29 Score=28.22 Aligned_cols=37 Identities=11% Similarity=0.195 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHCCCCCE-------EEECCCHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999983899789-------988791789999999999873287
Q gi|254781054|r 7 KRNAARRAIQYVVDGMT-------LGMGTGSTAKEFMILLADKIANGF 47 (231)
Q Consensus 7 K~~~a~~A~~~v~~gmv-------iGlGtGSTv~~~i~~L~~~~~~~~ 47 (231)
+......|..|...++. +|++. +||...++.+-+ +|+
T Consensus 16 ~~~~~~~~~~yy~e~~tq~eIA~~LgiSr-~~V~r~L~~a~~---~Gl 59 (200)
T 2p8t_A 16 TVEDVLAVIFLLKEPLGRKQISERLELGE-GSVRTLLRKLSH---LDI 59 (200)
T ss_dssp CHHHHHHHHHHTTSCBCHHHHHHHHTCCH-HHHHHHHHHHHH---TTS
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHCCCH-HHHHHHHHHHHH---CCC
T ss_conf 98999999998348855899998809827-899999999976---896
No 59
>>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} (A:96-267)
Probab=68.80 E-value=8.7 Score=19.07 Aligned_cols=90 Identities=16% Similarity=0.074 Sum_probs=60.7
Q ss_pred HHHHHHHHHH--CCCCC-EEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCC-CC-------CCCCC
Q ss_conf 9999999983--89978-99887917899999999998732870489618899999987315786-55-------10088
Q gi|254781054|r 8 RNAARRAIQY--VVDGM-TLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPL-HS-------PEDVS 76 (231)
Q Consensus 8 ~~~a~~A~~~--v~~gm-viGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~-~~-------l~~~~ 76 (231)
-..|..|++. +++|. ++-.|.|+.+..+...++.. .+.++.++.++......++++|-.. .+ .....
T Consensus 16 ~~ta~~a~~~~~~~~g~~vlI~Ga~g~~g~~~~~la~~--~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (172)
T 1iz0_A 16 FLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARA--XGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWG 93 (172)
T ss_dssp HHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHCCC
T ss_conf 67776556640789999999925867999999999997--6998977316757779999729946763066554654066
Q ss_pred EEEEEECCHHCCCCC-CEEEECCC
Q ss_conf 007986330004766-05883165
Q gi|254781054|r 77 SVDLSIDGFDEIDSR-LRLIKGYG 99 (231)
Q Consensus 77 ~iDi~iDGaDevd~~-l~lIKGgG 99 (231)
..|+.||-....-.+ +.++|-+|
T Consensus 94 g~d~v~d~~g~~~~~~~~~l~~~G 117 (172)
T 1iz0_A 94 GLDLVLEVRGKEVEESLGLLAHGG 117 (172)
T ss_dssp SEEEEEECSCTTHHHHHTTEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 864999787568999999873498
No 60
>>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} (A:1-83)
Probab=68.48 E-value=9 Score=18.97 Aligned_cols=75 Identities=15% Similarity=-0.059 Sum_probs=48.9
Q ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHH---HHHHCCCCE
Q ss_conf 57887267872575899999986322148985-03772258863625788889982079868989999---996279968
Q gi|254781054|r 129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNE-ELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS---GELCNIPGV 204 (231)
Q Consensus 129 g~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~-~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le---~~L~~IpGV 204 (231)
|+|++-++|.-.-.+-++..+-+++...|.+- .+....... -.++|.+.+++... +.|..+++ ..|++++||
T Consensus 1 G~y~v~l~v~~~Dr~G~L~~I~~iia~~~~nI~~i~~~~~~~---~~~~~~~~~~~~v~-v~~~~~l~~ii~~L~~i~~V 76 (83)
T 1y7p_A 1 GHMLRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKH---GEHEGKALIYFEIE-GGDFEKILERVKTFDYIIEI 76 (83)
T ss_dssp ---CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCS---STTTTEEEEEEEEC-SSCHHHHHHHHHTCTTEEEE
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECC---CCCCCCEEEEEEEC-CCCHHHHHHHHHCCCCEEEE
T ss_conf 931335899975876559998889986389759998773036---67788268999982-89989999998669965899
Q ss_pred EEC
Q ss_conf 664
Q gi|254781054|r 205 IEH 207 (231)
Q Consensus 205 Ve~ 207 (231)
.+.
T Consensus 77 ~~V 79 (83)
T 1y7p_A 77 EEE 79 (83)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 961
No 61
>>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str} (A:)
Probab=64.38 E-value=9.4 Score=18.85 Aligned_cols=43 Identities=26% Similarity=0.375 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHHCCCC--CEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 87899999999999838997--89988791789999999999873
Q gi|254781054|r 2 DALQMKRNAARRAIQYVVDG--MTLGMGTGSTAKEFMILLADKIA 44 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~~g--mviGlGtGSTv~~~i~~L~~~~~ 44 (231)
|.+++-+.+|....+.++.+ -+||+-+|||...+.+.|.++.+
T Consensus 9 ~~~~l~~~~a~~i~~~i~~~~~~~i~lsgG~tp~~~y~~l~~~~~ 53 (238)
T 1y89_A 9 TADAVVKSLADDXLAYSQQGQPVHISLSGGSTPKXLFKLLASQPY 53 (238)
T ss_dssp SHHHHHHHHHHHHHHHHTTSSCEEEEECCSHHHHHHHHHHTSTTH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 999999999999999998599889998389779999999987664
No 62
>>2pbf_A Protein-L-isoaspartate O-methyltransferase beta- aspartate methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum 3D7} (A:)
Probab=62.40 E-value=12 Score=18.25 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=33.0
Q ss_pred HHCCCCCE---EEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
Q ss_conf 83899789---98879178999999999987328704896188999999873
Q gi|254781054|r 16 QYVVDGMT---LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64 (231)
Q Consensus 16 ~~v~~gmv---iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~ 64 (231)
..+++++. +|-|||+...++.+..+.....+.++.++-.|......|++
T Consensus 76 ~~~~~g~~vLDiGcG~G~~~~~la~~~~~~~~~~~~V~giD~s~~~l~~a~~ 127 (227)
T 2pbf_A 76 NVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLE 127 (227)
T ss_dssp TTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHH
T ss_pred HCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHH
T ss_conf 4059986158852786489999887501124555337875302999999999
No 63
>>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} (A:336-464)
Probab=62.24 E-value=1.4 Score=24.07 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=45.2
Q ss_pred HHHHHHHHHCC--------CCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEEEE-----CHHHHHHHHHHCCCCCCC-CC
Q ss_conf 99999998389--------9789988791789999999999873-287048961-----889999998731578655-10
Q gi|254781054|r 9 NAARRAIQYVV--------DGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIP-----SSRNTENFCKIHHIPLHS-PE 73 (231)
Q Consensus 9 ~~a~~A~~~v~--------~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~v~-----tS~~t~~~a~~~gi~~~~-l~ 73 (231)
.-|.++..+++ +|+++|+|+|.|-+.--..++-.-+ +.+.-.+.+ +=.++-..|.+.|+..+- +.
T Consensus 21 ~Fa~~v~k~~kSNAI~~~~~g~~~gig~Gq~srv~~~~~a~~~a~~~l~g~vlaSDAFFPF~D~v~~A~~~GV~~IiqPg 100 (129)
T 1zcz_A 21 EFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAVVAPL 100 (129)
T ss_dssp HHHHHHHHHSCSSCEEEEETTEEEEEECSCSSHHHHHHHHHHHHGGGGTTCEEEESSCCSSHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCEEEECCC
T ss_conf 99999997678675799639938976889667799999999985102178799945687875589999983994999798
Q ss_pred CCCEEEEEECCHHCC
Q ss_conf 088007986330004
Q gi|254781054|r 74 DVSSVDLSIDGFDEI 88 (231)
Q Consensus 74 ~~~~iDi~iDGaDev 88 (231)
..-+=|-.|+-|||-
T Consensus 101 GSirD~evI~aane~ 115 (129)
T 1zcz_A 101 GSIRDEEVIEKAREL 115 (129)
T ss_dssp CCTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 743619999999975
No 64
>>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} (A:143-315)
Probab=61.87 E-value=12 Score=18.19 Aligned_cols=59 Identities=20% Similarity=0.108 Sum_probs=42.2
Q ss_pred HHHHHHHH--HCCCCCE-EEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCC
Q ss_conf 99999998--3899789-98879178999999999987328704896188999999873157865
Q gi|254781054|r 9 NAARRAIQ--YVVDGMT-LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLH 70 (231)
Q Consensus 9 ~~a~~A~~--~v~~gmv-iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~ 70 (231)
..|..|++ -+++|.. +=.|+|+.-..+++.+. +.|.++.++.+|.....+++++|....
T Consensus 13 ~ta~~al~~~~i~~g~~vlI~GaG~vG~~a~qla~---~~G~~vi~v~~~~~~~~~~~~lGa~~~ 74 (173)
T 1e3j_A 13 SVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAK---AYGAFVVCTARSPRRLEVAKNCGADVT 74 (173)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH---HTTCEEEEEESCHHHHHHHHHTTCSEE
T ss_pred HEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHH---HCCCEEEEEECCHHHHHHHHHCCCCEE
T ss_conf 00110155328999998999898730458999999---879989999688899999997399989
No 65
>>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, open form, form J, domain movement, cyclase; HET: NAD; 1.70A {Emericella nidulans} (A:1-181)
Probab=57.92 E-value=12 Score=18.10 Aligned_cols=52 Identities=4% Similarity=-0.118 Sum_probs=22.9
Q ss_pred CEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHH-------HHHHHHCCCCCCCCCC
Q ss_conf 8998879178999999999987328704896188999-------9998731578655100
Q gi|254781054|r 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT-------ENFCKIHHIPLHSPED 74 (231)
Q Consensus 22 mviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t-------~~~a~~~gi~~~~l~~ 74 (231)
..|-+|.|+.-... ++|..+...+.+..+|.....- ...+++.++....+++
T Consensus 13 ~~i~~G~g~~~~l~-~~l~~~~~~~~r~~ivtd~~~~~~~~~~l~~~l~~~~~~~~~~~~ 71 (181)
T 1sg6_A 13 ESIIADFGLWRNYV-AKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPR 71 (181)
T ss_dssp EEEEEETTHHHHTH-HHHHHHHSCCSEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCEEECCCCHHHHH-HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 11898888067776-999985079981899988965798999999999871752246762
No 66
>>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A* (A:)
Probab=57.73 E-value=12 Score=18.13 Aligned_cols=43 Identities=21% Similarity=0.197 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHCCCC--CEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 87899999999999838997--89988791789999999999873
Q gi|254781054|r 2 DALQMKRNAARRAIQYVVDG--MTLGMGTGSTAKEFMILLADKIA 44 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~~g--mviGlGtGSTv~~~i~~L~~~~~ 44 (231)
|.+++-+.+|..-.+.++.+ -+|+|-+|||...+.+.|++...
T Consensus 8 ~~~~l~~~~a~~i~~~i~~~~~~~i~lsgG~tp~~~y~~l~~~~~ 52 (242)
T 2bkx_A 8 TYEELSQIAARITADTIKEKPDAVLGLATGGTPEGTYRQLIRLHQ 52 (242)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCEEEECCSSTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 999999999999999999789879998898788999999987520
No 67
>>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} (A:56-144)
Probab=51.84 E-value=18 Score=17.16 Aligned_cols=64 Identities=3% Similarity=0.047 Sum_probs=48.2
Q ss_pred CCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEE
Q ss_conf 8726787257589999998632214898503772258863625788889982079868989999996279968664802
Q gi|254781054|r 132 MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF 210 (231)
Q Consensus 132 plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF 210 (231)
.+=|++.|..+..+.+.++++ +++... ..+|-+.+|++-+.+.+ ..+++..|..+|||..+--+
T Consensus 13 ~i~i~~~~~~~~~~~~~l~~~-------peV~~~-----~~vsG~~d~i~~v~~~d---~~~l~~~l~~i~~i~~~~T~ 76 (89)
T 2cfx_A 13 IVEATVKNADYERFKSYIQTL-------PNIEFC-----YRIAGAACYMLKINAES---LEAVEDFINKTSPYAQTVTH 76 (89)
T ss_dssp EEEEEEGGGCHHHHHHHHHTC-------TTEEEE-----EEEESSSSEEEEEEESS---HHHHHHHHHHHTTTEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHCC-------CCCEEE-----EEEECCCCEEEEEEECC---HHHHHHHHHHCCCCCCEEEE
T ss_conf 899997248799999987239-------862166-----89636898999999899---99999999966885644899
No 68
>>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A* (A:)
Probab=49.25 E-value=19 Score=16.90 Aligned_cols=42 Identities=17% Similarity=0.299 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHHHHHCCC------CCEEEECCCHHHHHHHHHHHHHH
Q ss_conf 8789999999999983899------78998879178999999999987
Q gi|254781054|r 2 DALQMKRNAARRAIQYVVD------GMTLGMGTGSTAKEFMILLADKI 43 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~~------gmviGlGtGSTv~~~i~~L~~~~ 43 (231)
|.+++-+.+|..-++.++. .-+|+|-+|||-..+.+.|++..
T Consensus 12 ~~~~l~~~~a~~i~~~i~~~~~~~~~~~i~lsGGstp~~~y~~L~~~~ 59 (266)
T 3eb9_A 12 TPQELSAAGCRKIVEIIEASGSQQWPLSIALAGGSTPKMTYARLHDEH 59 (266)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCGGGCSEEEEECCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 999999999999999999999848998999738788999999998741
No 69
>>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NAD; 2.05A {Pyrococcus horikoshii OT3} PDB: 2dfv_A* 3gfb_A* (A:146-314)
Probab=49.13 E-value=19 Score=16.89 Aligned_cols=61 Identities=15% Similarity=0.066 Sum_probs=43.2
Q ss_pred HHHHHHHHH-HCCCCC-EEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCC
Q ss_conf 999999998-389978-998879178999999999987328704896188999999873157865
Q gi|254781054|r 8 RNAARRAIQ-YVVDGM-TLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLH 70 (231)
Q Consensus 8 ~~~a~~A~~-~v~~gm-viGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~ 70 (231)
-..|..|+. .+++|. ++=.|.|+....+++.+... -...+.++.++..-..+++++|-...
T Consensus 9 ~~ta~~~l~~~~~~g~~vlI~Gag~~g~~a~~~a~~~--g~~~vi~~~~~~~~~~~~~~~g~~~~ 71 (169)
T 2d8a_A 9 LGNAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKVGADYV 71 (169)
T ss_dssp HHHHHHHHTTSCCTTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEEECCHHHHHHHHHCCCCEE
T ss_conf 6666666552047999899989788999999999975--99189999699999999997099899
No 70
>>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomics, montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli O157} (A:271-378,A:406-417,A:449-531)
Probab=48.00 E-value=19 Score=16.99 Aligned_cols=142 Identities=15% Similarity=0.051 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH-HCC-------CEEEEEECHHHHHHHHHHCCCCCC------C
Q ss_conf 99999999998389978998879178999999999987-328-------704896188999999873157865------5
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANG-------FRVQVIPSSRNTENFCKIHHIPLH------S 71 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~-~~~-------~~i~~v~tS~~t~~~a~~~gi~~~------~ 71 (231)
.++..|+.|+..+++|+++-+|.|--.... .+++++. ... --+-.+|.|-..--.+.. +--+. +
T Consensus 17 ~re~ia~raArEL~dG~vVnlGiGlP~lva-~~laee~~a~~v~l~~E~G~iG~~P~~g~~~~~~~n-a~ai~d~~~~F~ 94 (203)
T 2ahu_A 17 QRKLVARRALFEXRKGAVGNVGVGIADGIG-LVAREEGCADDFILTVETGPIGGITSQGIAFGANVN-TRAILDXTSQFD 94 (203)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECSSTTTTHH-HHHHHHTCGGGSEEBCTTSEESCBCC-----CCCBS-CSEECCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHCCCCCCCHHH-HHHHHCCCCCCEEEEECCCCCCCEECCHHHHHCCCC-CCCCCCCCCCHH
T ss_conf 256899999996434620110677530344-444432544441677656525886221121000346-433456654578
Q ss_pred CCCCCEEEEEECCHHCCCCCCE-----EEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC-CCCCCEEEEECCHHHH
Q ss_conf 1008800798633000476605-----883165777778799861022699962303513455-7887267872575899
Q gi|254781054|r 72 PEDVSSVDLSIDGFDEIDSRLR-----LIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEIDQFGVNKT 145 (231)
Q Consensus 72 l~~~~~iDi~iDGaDevd~~l~-----lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg-~~plPVEV~p~~~~~v 145 (231)
+-+-+++|++|=||......+- .-|.|--+. .-.+-+.++.|.=.- .|. ..-.-+|+-|-- .
T Consensus 95 ~~~gG~lDvtfLGa~~~~~k~~~~~~~vt~~g~~~~--------~~~~~v~~iTeraVf-~l~~~gl~L~EiapGv---d 162 (203)
T 2ahu_A 95 FYHGGGLDVCYLSFSATSKKIIFCGTEITFSGKIAL--------ERGLDVRYITERAVF-TLKEDGLHLIEIAPGV---D 162 (203)
T ss_dssp HHHTTCCSEEEEECHTTCSEEEEECCSCSBCHHHHH--------HTTCEEEEECSSEEE-EEETTEEEEEEECTTC---C
T ss_pred HHHCCCCCEEEECCCCCCCEEEEECCEECCCCCCCC--------CCCCCEEEECCCEEE-EECCCEEEEEEECCCC---C
T ss_conf 884688548986405787516994343678753121--------379856998898699-9789969999979999---8
Q ss_pred HHHHHHHHHHCCCCCEEE
Q ss_conf 999986322148985037
Q gi|254781054|r 146 LSALKEVASCFGLNEELR 163 (231)
Q Consensus 146 ~~~l~~~~~~~G~~~~lR 163 (231)
.. +.++...++.+.+-
T Consensus 163 le--~dil~~~~f~~~va 178 (203)
T 2ahu_A 163 LQ--KDILDKXDFTPVIS 178 (203)
T ss_dssp HH--HHTGGGSSSCCEEE
T ss_pred HH--HHHHHHCCCCCEEC
T ss_conf 77--99998279983538
No 71
>>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, catalytic loop; HET: 9DA; 1.85A {Giardia intestinalis} (A:)
Probab=46.18 E-value=21 Score=16.72 Aligned_cols=112 Identities=9% Similarity=-0.031 Sum_probs=50.5
Q ss_pred CCCHHHHHHHHHHHHHHHC-CCE-EEEEECH--HHHHHHHHHCCCCCCCCCCCCE-----------------EEEEEC-C
Q ss_conf 7917899999999998732-870-4896188--9999998731578655100880-----------------079863-3
Q gi|254781054|r 27 GTGSTAKEFMILLADKIAN-GFR-VQVIPSS--RNTENFCKIHHIPLHSPEDVSS-----------------VDLSID-G 84 (231)
Q Consensus 27 GtGSTv~~~i~~L~~~~~~-~~~-i~~v~tS--~~t~~~a~~~gi~~~~l~~~~~-----------------iDi~iD-G 84 (231)
+.........++|+++... ..+ +.+++++ ......+..++.|......... ..+... +
T Consensus 33 ~~~~~~~~l~~~l~~~~~~~~~d~i~~~~~~g~~~a~~~a~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (186)
T 1l1q_A 33 STPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKR 112 (186)
T ss_dssp TCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEEEETTSSCSSEEEEEEEETTEEEEEEEEEGG
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEHH
T ss_conf 79999999999999970658997999825664367689999819998988843788863179998516666707887653
Q ss_pred HHCCCCCC----EEEECCCHHHHHHHHHHHHHC---CEEEEEEHH----HCCCCCCCCCCCEEEE
Q ss_conf 00047660----588316577777879986102---269996230----3513455788726787
Q gi|254781054|r 85 FDEIDSRL----RLIKGYGGALLREKIIAHAAS---RFIVIGDES----KRVDFLGRGMLPIEID 138 (231)
Q Consensus 85 aDevd~~l----~lIKGgGgAl~rEKiva~~a~---~~I~i~D~s----K~v~~Lg~~plPVEV~ 138 (231)
++-=..+- +.|-.||-+.---+++..+-- ..++++|.. +-.+.|....+|++.+
T Consensus 113 ~~~~Gk~VliVDDvi~TG~T~~~~~~~l~~~Ga~vv~v~v~~~~~~~~~~~~~~l~~~~i~~~~l 177 (186)
T 1l1q_A 113 QLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKCTRLFSV 177 (186)
T ss_dssp GCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHHHHHTTTCCCEEEE
T ss_pred HCCCCCEEEEEEECHHHCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCEEEE
T ss_conf 41789989999730332569999999999879946889999999857788488851689747998
No 72
>>2vef_A Dihydropteroate synthase; antibiotic resistance, folic acid, transferase, biosynthesis, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A* (A:)
Probab=45.89 E-value=22 Score=16.58 Aligned_cols=63 Identities=13% Similarity=0.143 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHCCCC-CEEEECCCHH---------------HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCC
Q ss_conf 999999999838997-8998879178---------------999999999987328704896188999999873157865
Q gi|254781054|r 7 KRNAARRAIQYVVDG-MTLGMGTGST---------------AKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLH 70 (231)
Q Consensus 7 K~~~a~~A~~~v~~g-mviGlGtGST---------------v~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~ 70 (231)
.+.+-++|.++++.| .+|=+|.+|| +..+++++.+. ...-+.+=+.+......|.++|.+++
T Consensus 32 ~~~~~~~a~~~~~~GAdiIDIG~~st~p~~~~v~~eeE~~rl~~~i~~i~~~--~~~piSIDT~~~~v~~~al~~G~diI 109 (314)
T 2vef_A 32 LEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKE--SDVLISIDTWKSQVAEAALAAGADLV 109 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHH--CCCEEEEECSCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCEECCCCCEECCHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCHHHHHHHHHCCCCEE
T ss_conf 9999999999998799799979723799895057477666668899998644--78850415576688999997697389
Q ss_pred C
Q ss_conf 5
Q gi|254781054|r 71 S 71 (231)
Q Consensus 71 ~ 71 (231)
-
T Consensus 110 N 110 (314)
T 2vef_A 110 N 110 (314)
T ss_dssp E
T ss_pred E
T ss_conf 7
No 73
>>2zbc_A 83AA long hypothetical transcriptional regulator ASNC; SARD; 1.90A {Sulfolobus tokodaii str} (A:)
Probab=45.62 E-value=22 Score=16.55 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=48.5
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHH-HHHHHCCCCEEECCEE
Q ss_conf 72678725758999999863221489850377225886362578888998207986898999-9996279968664802
Q gi|254781054|r 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII-SGELCNIPGVIEHGLF 210 (231)
Q Consensus 133 lPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~l-e~~L~~IpGVVe~GlF 210 (231)
+=|++-|-.+..+.+.|.+ -|+++... .+|-..++++-+.+.+..+...+ ...|..+|||-.+--+
T Consensus 6 v~i~~~~~~~~~~~~~l~~-------~peV~~~~-----~vtG~~D~i~~v~~~d~~~l~~~i~~~l~~~~gV~~~~T~ 72 (83)
T 2zbc_A 6 VLINTDAGGEDEVFERLKS-------XSEVTEVH-----VVYGVYDIVVKVEADSXDKLKDFVTNTIRKLPKVRSTLTX 72 (83)
T ss_dssp EEEEESTTCHHHHHHHHTT-------CTTEEEEE-----ECSSSCSEEEEEECSSHHHHHHHHHHTGGGSTTEEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHC-------CCCEEEEE-----EEECCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 9999778999999999976-------97724899-----9108762999999999999999999987259998369999
No 74
>>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogenic protozoa consortium, SGPP, leishmaniasis; 1.70A {Leishmania braziliensismhom} PDB: 3ch7_A (A:)
Probab=44.12 E-value=23 Score=16.41 Aligned_cols=43 Identities=23% Similarity=0.191 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHHHHHCCC------CCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 8789999999999983899------789988791789999999999873
Q gi|254781054|r 2 DALQMKRNAARRAIQYVVD------GMTLGMGTGSTAKEFMILLADKIA 44 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~~------gmviGlGtGSTv~~~i~~L~~~~~ 44 (231)
|.+++-+.+|..-++.++. .-+|+|-+|||-..+.+.|++..+
T Consensus 13 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~i~lsgG~tp~~~y~~L~~~~~ 61 (267)
T 3css_A 13 NLSQMSFAAREVILAAIDARVDKSVPVVLALSGGSTPKRLYEELHEKDL 61 (267)
T ss_dssp SHHHHHHHHHHHHHHHHHTCSSTTSCEEEEECCSSTTHHHHHHHHHHSH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9999999999999999999986289989997898229999999986511
No 75
>>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis} (A:)
Probab=43.26 E-value=24 Score=16.33 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHHCC------CCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 878999999999998389------97899887917899999999998732
Q gi|254781054|r 2 DALQMKRNAARRAIQYVV------DGMTLGMGTGSTAKEFMILLADKIAN 45 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~------~gmviGlGtGSTv~~~i~~L~~~~~~ 45 (231)
|.+++-+.+|....+.++ +.-+|++-+|||...+.+.|.+..+.
T Consensus 31 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~i~lsgG~tp~~~~~~l~~~~~~ 80 (268)
T 3ico_A 31 DSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQ 80 (268)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC
T ss_conf 99999999999999999999986799899985895899999999743426
No 76
>>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} (A:172-314)
Probab=43.23 E-value=24 Score=16.32 Aligned_cols=58 Identities=16% Similarity=0.131 Sum_probs=43.0
Q ss_pred HHHHHHHH--HCCCCCEEE-ECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCC
Q ss_conf 99999998--389978998-87917899999999998732870489618899999987315786
Q gi|254781054|r 9 NAARRAIQ--YVVDGMTLG-MGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPL 69 (231)
Q Consensus 9 ~~a~~A~~--~v~~gmviG-lGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~ 69 (231)
..|..+++ .+++|..|= .|.|..-.+.++.+.. .|.+..++..|......++++|...
T Consensus 10 ~ta~~~l~~~~~~~g~~VlI~GaG~vG~~a~q~a~~---~G~~vi~~~~~~~~~~~~~~~ga~~ 70 (143)
T 1uuf_A 10 ITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHA---MGAHVVAFTTSEAKREAAKALGADE 70 (143)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHTCSE
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH---CCCCCEEECCCCHHHHHHHHCCCCE
T ss_conf 011111211235766543699884343566999986---4874054214323899998709840
No 77
>>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae} (A:)
Probab=43.04 E-value=24 Score=16.31 Aligned_cols=42 Identities=19% Similarity=0.258 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHHHHC------CCCCEEEECCCHHHHHHHHHHHHHH
Q ss_conf 87899999999999838------9978998879178999999999987
Q gi|254781054|r 2 DALQMKRNAARRAIQYV------VDGMTLGMGTGSTAKEFMILLADKI 43 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v------~~gmviGlGtGSTv~~~i~~L~~~~ 43 (231)
|.+++=+.+|....+.+ +..-+|+|-+|||...+.+.|++.-
T Consensus 10 ~~~~~~~~~a~~i~~~i~~~~~~~~~~~i~lsGGstp~~ly~~L~~~~ 57 (232)
T 3lhi_A 10 NAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQKD 57 (232)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHC
T ss_conf 999999999999999999999977998999879752999999998747
No 78
>>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative; 1.95A {Thermotoga maritima MSB8} (A:)
Probab=42.38 E-value=25 Score=16.24 Aligned_cols=65 Identities=18% Similarity=0.138 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCE
Q ss_conf 758999999863221489850377225886362578888998207986898999999627996866480
Q gi|254781054|r 141 GVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGL 209 (231)
Q Consensus 141 ~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~Gl 209 (231)
........+++++..+|.--.-|++- |+...|-++|.=.--.+-.....|..+|.++|||=---.
T Consensus 16 ~r~~~a~kvneiL~~y~~~I~gRmGi----P~~~~~v~iIsl~v~g~~d~I~aLtgkLg~i~gV~vK~~ 80 (86)
T 2nzc_A 16 DREKAYRQVNELLHNFSEDILLRVGY----PVREENXAIIFLVLKTDNDTIGALSGKLGQISGVRVKTV 80 (86)
T ss_dssp SCHHHHHHHHHHHHHTGGGEEEEEEE----EEGGGTEEEEEEEEEECHHHHHHHHHHHHTSTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCC----CCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 85886899999998768878986478----705479159999998888799998876369998899999
No 79
>>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax} (A:)
Probab=40.78 E-value=16 Score=17.41 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHHHCC-------CC-CEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 878999999999998389-------97-89988791789999999999873
Q gi|254781054|r 2 DALQMKRNAARRAIQYVV-------DG-MTLGMGTGSTAKEFMILLADKIA 44 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~-------~g-mviGlGtGSTv~~~i~~L~~~~~ 44 (231)
|.+++-+.+|...++.|. ++ -+|+|-+|||-..+.+.|++..+
T Consensus 34 ~~~~l~~~~a~~i~~~i~~~~~~~~~~~~~i~lsgG~tp~~ly~~L~~~~~ 84 (312)
T 3e15_A 34 DLTDFNQKSAYYICHQIAEKQLSKEGGHVVIGLSGGKTPIDVYKNIALVKD 84 (312)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEECCSHHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 888999999999999999988652499889996898019999999986254
No 80
>>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A* (A:1-165)
Probab=40.46 E-value=27 Score=16.06 Aligned_cols=36 Identities=6% Similarity=0.065 Sum_probs=19.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH
Q ss_conf 78998879178999999999987328704896188999999
Q gi|254781054|r 21 GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61 (231)
Q Consensus 21 gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~ 61 (231)
-..+=.|.|+ +..|++.++...+..+|..+...+..
T Consensus 11 p~~i~~g~g~-----~~~l~~~l~~~~~~livtd~~~~~~~ 46 (165)
T 1xah_A 11 NYPIYVEHGA-----IKYIGTYLNQFDQSFLLIDEYVNQYF 46 (165)
T ss_dssp CCEEEEETTG-----GGHHHHHHTTCSCEEEEEEHHHHHHH
T ss_pred CCEEEECCCH-----HHHHHHHHHHCCCEEEEECCCHHHHH
T ss_conf 8059992897-----98899999735979999998578999
No 81
>>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A (A:144-296)
Probab=38.92 E-value=28 Score=15.91 Aligned_cols=74 Identities=11% Similarity=-0.014 Sum_probs=45.1
Q ss_pred HHHHHHHH--HCCCC-CEEEECCCHHHHHHHHHHHHHHHCCC-EEEEEECHHHHHHHHHHCCCCCCC-CCC---------
Q ss_conf 99999998--38997-89988791789999999999873287-048961889999998731578655-100---------
Q gi|254781054|r 9 NAARRAIQ--YVVDG-MTLGMGTGSTAKEFMILLADKIANGF-RVQVIPSSRNTENFCKIHHIPLHS-PED--------- 74 (231)
Q Consensus 9 ~~a~~A~~--~v~~g-mviGlGtGSTv~~~i~~L~~~~~~~~-~i~~v~tS~~t~~~a~~~gi~~~~-l~~--------- 74 (231)
..|..+++ .+++| .++=+|.|+.--.+++.+.. .+. .+.++.++.....++++++..... ..+
T Consensus 10 ~ta~~~l~~~~~~~g~~vlv~GaG~vG~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (153)
T 3fpc_A 10 TTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANH---LGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILK 86 (153)
T ss_dssp HHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHT---TTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHH---HHCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 789989985389999999997668656168999998---50881999949999999999669958860899889999999
Q ss_pred ---CCEEEEEECCH
Q ss_conf ---88007986330
Q gi|254781054|r 75 ---VSSVDLSIDGF 85 (231)
Q Consensus 75 ---~~~iDi~iDGa 85 (231)
-..+|+.||-+
T Consensus 87 ~~~~~g~D~vid~~ 100 (153)
T 3fpc_A 87 ATDGKGVDKVVIAG 100 (153)
T ss_dssp HTTTCCEEEEEECS
T ss_pred HHCCCCCCEEEECC
T ss_conf 83677887899877
No 82
>>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: CIT; 1.55A {Thermotoga maritima} (A:)
Probab=38.77 E-value=19 Score=17.00 Aligned_cols=40 Identities=13% Similarity=0.022 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHC------CCCCEEEECCCHHHHHHHHHHHHHH
Q ss_conf 899999999999838------9978998879178999999999987
Q gi|254781054|r 4 LQMKRNAARRAIQYV------VDGMTLGMGTGSTAKEFMILLADKI 43 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v------~~gmviGlGtGSTv~~~i~~L~~~~ 43 (231)
+++-+.+|..-++.+ ++.-+|+|-+|||...+.+.|.+..
T Consensus 23 ~~~~~~~a~~i~~~i~~~~~~~~~~~i~lsgG~tp~~~~~~l~~~~ 68 (232)
T 1vl1_A 23 DGYVDFVVEKIRTKMEKLLEEKDKIFVVLAGGRTPLPVYEKLAEQK 68 (232)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHCSCEEEEECCSTTHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHC
T ss_conf 9999999999999999999758998999889941999999998746
No 83
>>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} (A:167-309)
Probab=37.45 E-value=30 Score=15.77 Aligned_cols=54 Identities=7% Similarity=-0.034 Sum_probs=33.6
Q ss_pred HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCC-CEEEEEECHHHHHHHHHHCCCCC
Q ss_conf 998389978998879178999999999987328-70489618899999987315786
Q gi|254781054|r 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFCKIHHIPL 69 (231)
Q Consensus 14 A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~-~~i~~v~tS~~t~~~a~~~gi~~ 69 (231)
+...+++|.+|-+..+.++-.+.-.++.. .+ ..+.++.++.....+++++|...
T Consensus 14 ~~~~~~~g~~Vli~GaG~vG~~a~~la~~--~g~~~Vi~~~~~~~~~~~~~~~~~~~ 68 (143)
T 1h2b_A 14 AARTLYPGAYVAIVGVGGLGHIAVQLLKV--MTPATVIALDVKEEKLKLAERLGADH 68 (143)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHH--HCCCEEEEEESSHHHHHHHHHTTCSE
T ss_pred ECEEECCCCEEEEECCCCCCCCHHHHHHH--HCCCEEEEEECCHHHHHHHHHCCCEE
T ss_conf 01130799789997557765315899998--39988999968389765555228809
No 84
>>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii OT3} (A:253-450)
Probab=37.32 E-value=30 Score=15.75 Aligned_cols=50 Identities=16% Similarity=0.122 Sum_probs=32.3
Q ss_pred HCCCCCE---EEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH----HCCCCCC
Q ss_conf 3899789---9887917899999999998732870489618899999987----3157865
Q gi|254781054|r 17 YVVDGMT---LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK----IHHIPLH 70 (231)
Q Consensus 17 ~v~~gmv---iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~----~~gi~~~ 70 (231)
.+++||. +|-|+|+.+.++ +++...+..++++-.|...-..|+ ..|++-+
T Consensus 4 ~l~~G~rVLDiGcG~G~~t~~l----A~~~~~~~~V~~iD~s~~~l~~a~~~~~~~~~~n~ 60 (198)
T 2yxl_A 4 DPKPGETVVDLAAAPGGKTTHL----AELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIV 60 (198)
T ss_dssp CCCTTCEEEESSCTTCHHHHHH----HHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSE
T ss_pred CCCCCCEEEECCCCCCCCHHHH----HHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCC
T ss_conf 7766541441145667314444----76641344202212667778779988764165410
No 85
>>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha JMP134} (A:1-161)
Probab=35.94 E-value=31 Score=15.62 Aligned_cols=42 Identities=19% Similarity=0.010 Sum_probs=29.7
Q ss_pred EEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 079863300047660588316577777879986102269996
Q gi|254781054|r 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119 (231)
Q Consensus 78 iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~ 119 (231)
++-..+-+-+...+.-+-=|||-++--=|.+|+....-++.+
T Consensus 78 v~~~~~~~~~~~~d~IiaiGGGs~~D~aK~~a~~~~~p~i~v 119 (161)
T 3jzd_A 78 ARDATARAREAGADCAVAVGGGSTTGLGKAIALETGXPIVAI 119 (161)
T ss_dssp HHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEE
T ss_conf 999998753148978984278554434431011212205764
No 86
>>2qrd_A SNF1-like protein kinase SSP2; AMPK, ADP, ATP, ATP-binding, kinase, nucleotide-binding, serine/threonine-protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} (A:)
Probab=35.94 E-value=6.7 Score=19.78 Aligned_cols=81 Identities=15% Similarity=0.085 Sum_probs=47.9
Q ss_pred CCC-C-CCCCEEEEECCHHHHHHHHHHHHHHCCCCCE---------------EEEEECCC---------------CCEEC
Q ss_conf 455-7-8872678725758999999863221489850---------------37722588---------------63625
Q gi|254781054|r 127 FLG-R-GMLPIEIDQFGVNKTLSALKEVASCFGLNEE---------------LRLRRNGS---------------GLFVS 174 (231)
Q Consensus 127 ~Lg-~-~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~---------------lR~~~~~~---------------gp~iT 174 (231)
+|| + -.=|.|| ...+.++|+++ |+.++ +|.+...+ .-|-+
T Consensus 14 hlGIrSrs~P~ei----M~eVyrALk~L----g~eWk~~~~y~~kc~~~~~~i~vr~~~~~~~~~~~~~~vK~~lQLYqv 85 (137)
T 2qrd_A 14 HFGVRCRGDAPEI----LLAVYRALQRA----GAQFTVPKPVNGKYRSDMYTIKSRWEIPHCKREGKNTYAYIELQLYEV 85 (137)
T ss_dssp EESEEEESCHHHH----HHHHHHHHHHH----TCEECCCCCBTTBCCGGGGEEEEEEECHHHHHTTCCEEEEEEEEEEEE
T ss_pred EECCCCCCCHHHH----HHHHHHHHHHC----CCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEE
T ss_conf 3414468997999----99999999985----986855576445466556037997405887455777427999999986
Q ss_pred CCCCEEEEECCCC--CCCHHHHHHHHHCCCCEEECCEECCCCC
Q ss_conf 7888899820798--6898999999627996866480247677
Q gi|254781054|r 175 DGGNYIVDAFFGF--IPDPQIISGELCNIPGVIEHGLFINMVD 215 (231)
Q Consensus 175 DnGN~IlD~~~~~--i~dp~~le~~L~~IpGVVe~GlF~~~~d 215 (231)
|++||++|..+.. ..++.....+...-..|--.=.|.++|.
T Consensus 86 ~~~~YLlDfk~~~~e~~~~~~~~~~~~~~~~~~~~~~Fldlca 128 (137)
T 2qrd_A 86 MPGCFMLDVKSNGYKDIYSHPERTADHGMDDLKSSFPFLDLCA 128 (137)
T ss_dssp ETTEEEEEEEEEEEEESCC-------------CCCTTHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 4885799973377643457766555676666678856899999
No 87
>>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, alternative splicing, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} (A:152-323)
Probab=35.82 E-value=31 Score=15.61 Aligned_cols=88 Identities=16% Similarity=0.163 Sum_probs=44.4
Q ss_pred HHHHHHHHH-------CCCCC-EEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCC-CCCC--------
Q ss_conf 999999983-------89978-998879178999999999987328704896188999999873157-8655--------
Q gi|254781054|r 9 NAARRAIQY-------VVDGM-TLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHI-PLHS-------- 71 (231)
Q Consensus 9 ~~a~~A~~~-------v~~gm-viGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi-~~~~-------- 71 (231)
..|..|+.. .++|. ++..|.|+-+....-.|+.. .|..+.+..++. ....+.++|- .+..
T Consensus 14 ~Ta~~al~~~~~~~~~~~~g~~vli~g~~~~vG~~~iqla~~--~G~~vv~~~~~~-~~~~~~~~g~~~~i~~~~~d~~~ 90 (172)
T 2vn8_A 14 LTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKA--WDAHVTAVCSQD-ASELVRKLGADDVIDYKSGSVEE 90 (172)
T ss_dssp HHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEECGG-GHHHHHHTTCSEEEETTSSCHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH--HCCCCEEEECHH-HHHHHHHCCCCEEECCCCCCCCC
T ss_conf 401668998633223578877799973158754210334443--045311342225-89999974998753132112221
Q ss_pred -CCCCCEEEEEEC--CHHCCCCCCEEEECCC
Q ss_conf -100880079863--3000476605883165
Q gi|254781054|r 72 -PEDVSSVDLSID--GFDEIDSRLRLIKGYG 99 (231)
Q Consensus 72 -l~~~~~iDi~iD--GaDevd~~l~lIKGgG 99 (231)
+.+....|++|| |.+.++..++.++-+|
T Consensus 91 ~~~~~~g~D~vid~vg~~~~~~~~~~l~~~G 121 (172)
T 2vn8_A 91 QLKSLKPFDFILDNVGGSTETWAPDFLKKWS 121 (172)
T ss_dssp HHHTSCCBSEEEESSCTTHHHHGGGGBCSSS
T ss_pred CCCCCCCCEEEEEEECCCHHHHHHHHHHHCC
T ss_conf 1222467226664541531677899886269
No 88
>>2qlv_A Carbon catabolite derepressing protein kinase; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} (A:38-171)
Probab=34.85 E-value=16 Score=17.41 Aligned_cols=56 Identities=29% Similarity=0.463 Sum_probs=35.1
Q ss_pred CCC-C-CCCCEEEEECCHHHHHHHHHHHHHHCCCCC---------EEEEEECCC-------------------CCEECCC
Q ss_conf 455-7-887267872575899999986322148985---------037722588-------------------6362578
Q gi|254781054|r 127 FLG-R-GMLPIEIDQFGVNKTLSALKEVASCFGLNE---------ELRLRRNGS-------------------GLFVSDG 176 (231)
Q Consensus 127 ~Lg-~-~plPVEV~p~~~~~v~~~l~~~~~~~G~~~---------~lR~~~~~~-------------------gp~iTDn 176 (231)
+|| + -.=|.|| ...+.++|+++ |+.+ .+|.|-.-+ .-|-+|+
T Consensus 10 ~lGIrSr~~P~ei----M~evyrAL~~L----g~~Wk~~~~~~py~ik~Rw~~~~~~~~~~n~~~p~~vKm~lQLYqv~~ 81 (134)
T 2qlv_A 10 HFGIRSRSYPLDV----MGEIYIALKNL----GAEWAKPSEEDLWTIKLRWKYDIGNKTNTNEKIPDLMKMVIQLFQIET 81 (134)
T ss_dssp EESEEECSCHHHH----HHHHHHHHHHH----TCEECCCC---CCEEEEEEC--------------CEEEEEEEEEC---
T ss_pred EEECCCCCCHHHH----HHHHHHHHHHC----CCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECC
T ss_conf 5504468998999----99999999985----984831688876379997406877654567788832899999998748
Q ss_pred CCEEEEECCCCCCC
Q ss_conf 88899820798689
Q gi|254781054|r 177 GNYIVDAFFGFIPD 190 (231)
Q Consensus 177 GN~IlD~~~~~i~d 190 (231)
+||++|..+...+.
T Consensus 82 ~~YLlDFK~~~~e~ 95 (134)
T 2qlv_A 82 NNYLVDFKFDGWES 95 (134)
T ss_dssp CCEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCCC
T ss_conf 86799885168654
No 89
>>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} (A:112-315)
Probab=34.32 E-value=33 Score=15.46 Aligned_cols=52 Identities=8% Similarity=-0.064 Sum_probs=32.5
Q ss_pred HHHHCCCCCE---EEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH----HCCCCC
Q ss_conf 9983899789---9887917899999999998732870489618899999987----315786
Q gi|254781054|r 14 AIQYVVDGMT---LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK----IHHIPL 69 (231)
Q Consensus 14 A~~~v~~gmv---iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~----~~gi~~ 69 (231)
|+-.+++||. ||=|||+.+.++. ++...+-.++++-.|......|+ +++.+-
T Consensus 1 ~~l~l~pG~~VLDiGcGtG~~a~~lA----~~~g~~g~V~gvD~s~~~l~~A~~~~~~~~~~~ 59 (204)
T 1ixk_A 1 VALDPKPGEIVADXAAAPGGKTSYLA----QLXRNDGVIYAFDVDENRLRETRLNLSRLGVLN 59 (204)
T ss_dssp HHHCCCTTCEEEECCSSCSHHHHHHH----HHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCS
T ss_pred HHCCCCCCCEEEECCCCHHHHHHHHH----HHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 86388999968862745788999999----850687337862178889999999898718765
No 90
>>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A* (A:1-173)
Probab=34.00 E-value=34 Score=15.42 Aligned_cols=25 Identities=0% Similarity=-0.319 Sum_probs=13.5
Q ss_pred EHHHCCCCCCCCCCCEEEEECCHHH
Q ss_conf 2303513455788726787257589
Q gi|254781054|r 120 DESKRVDFLGRGMLPIEIDQFGVNK 144 (231)
Q Consensus 120 D~sK~v~~Lg~~plPVEV~p~~~~~ 144 (231)
|-.|.+..+...++|.-.+|-....
T Consensus 108 D~ak~~a~~~~~~~p~i~VPTt~~t 132 (173)
T 2gru_A 108 NVAGVAAGMMFRGIALIHVPTTFLA 132 (173)
T ss_dssp HHHHHHHHHBTTCCEEEEEECSHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCHHH
T ss_conf 7899999887146424663360774
No 91
>>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase, multiple conformers; HET: 16G TLA; 1.73A {Escherichia coli} (A:)
Probab=33.77 E-value=34 Score=15.40 Aligned_cols=43 Identities=28% Similarity=0.315 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHC-----C-C-CCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 7899999999999838-----9-9-7899887917899999999998732
Q gi|254781054|r 3 ALQMKRNAARRAIQYV-----V-D-GMTLGMGTGSTAKEFMILLADKIAN 45 (231)
Q Consensus 3 ~~~~K~~~a~~A~~~v-----~-~-gmviGlGtGSTv~~~i~~L~~~~~~ 45 (231)
.+++-+.+|..-++.+ + + ..+|++-+|||-..+.+.|++...+
T Consensus 9 ~~~~~~~~a~~i~~~i~~~~~~~~~~~~ialsGG~tp~~~y~~L~~~~~~ 58 (266)
T 1fs5_A 9 AEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKA 58 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSSTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 99999999999999999877604998499989985599999999976651
No 92
>>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate synthase, structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824} (A:1-162)
Probab=33.52 E-value=34 Score=15.37 Aligned_cols=58 Identities=16% Similarity=-0.040 Sum_probs=31.7
Q ss_pred HHHCCCCCCCCCC-CCEEEEEECCHH---CCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 8731578655100-880079863300---047660588316577777879986102269996
Q gi|254781054|r 62 CKIHHIPLHSPED-VSSVDLSIDGFD---EIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119 (231)
Q Consensus 62 a~~~gi~~~~l~~-~~~iDi~iDGaD---evd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~ 119 (231)
++..++.+..... .+..+-..+++- +...+.-.--|||-++--=|.+|+....-++.+
T Consensus 57 L~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~d~iiaiGGGs~~D~aK~~a~~~~~~~i~v 118 (162)
T 3ce9_A 57 IKSSNIEIEAVETVKNIDFDEIGTNAFKIPAEVDALIGIGGGKAIDAVKYXAFLRKLPFISV 118 (162)
T ss_dssp HHTTTCEEEEEEEECCCBHHHHHHHHTTSCTTCCEEEEEESHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 98779989998579999889999999986436888997057755553100134566753999
No 93
>>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} (A:137-268)
Probab=33.28 E-value=34 Score=15.35 Aligned_cols=50 Identities=6% Similarity=-0.123 Sum_probs=33.2
Q ss_pred HCCCCCEEEE-CCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCC
Q ss_conf 3899789988-791789999999999873287048961889999998731578
Q gi|254781054|r 17 YVVDGMTLGM-GTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68 (231)
Q Consensus 17 ~v~~gmviGl-GtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~ 68 (231)
++++|..|=+ |.++.+-.+.-.+++ +.|.++.++.+|......++++|-.
T Consensus 1 ~ik~Gd~VlI~Ga~G~vG~~a~q~a~--~~G~~vi~~~~~~~~~~~~~~~ga~ 51 (132)
T 1qor_A 1 EIKPDEQFLFHAAAGGVGLIACQWAK--ALGAKLIGTVGTAQKAQSALKAGAW 51 (132)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHH--HHTCEEEEEESSHHHHHHHHHHTCS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEECCCHHHHHHHHHCCCC
T ss_conf 98998999998995399999999999--8599899974737789999976998
No 94
>>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} (A:)
Probab=33.25 E-value=35 Score=15.35 Aligned_cols=43 Identities=28% Similarity=0.213 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHC------CCC-CEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 7899999999999838------997-899887917899999999998732
Q gi|254781054|r 3 ALQMKRNAARRAIQYV------VDG-MTLGMGTGSTAKEFMILLADKIAN 45 (231)
Q Consensus 3 ~~~~K~~~a~~A~~~v------~~g-mviGlGtGSTv~~~i~~L~~~~~~ 45 (231)
.+++-+.+|..-++.+ +++ -+|+|-+|||-..+.+.|+++.+.
T Consensus 9 ~~~~~~~~a~~i~~~i~~~~~~~~~~~~i~lsGGstp~~ly~~l~~~~~~ 58 (289)
T 1ne7_A 9 YSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKN 58 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 99999999999999999724166997899979986599999999999862
No 95
>>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A (A:)
Probab=33.11 E-value=35 Score=15.33 Aligned_cols=70 Identities=14% Similarity=0.087 Sum_probs=50.6
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEECC
Q ss_conf 72678725758999999863221489850377225886362578888998207986898999999627996866480247
Q gi|254781054|r 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212 (231)
Q Consensus 133 lPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~~ 212 (231)
+-|.+.|.....+.+.|..+. ..++-. .-+|+|-+++=+.-....+..+.-..|..+|||+...+-..
T Consensus 10 ~vV~~~Pe~~~~V~~~l~~~~-----g~Eih~-------~~~~~GKlVVtiE~~~~~~~~~~i~~I~~l~GVlsa~lvY~ 77 (95)
T 2jsx_A 10 LVVQAKSERISDISTQLNAFP-----GCEVAV-------SDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYH 77 (95)
T ss_dssp EEEEECTTSHHHHHHHHTTST-----TEEEEE-------EETTTTEEEEEEEESSHHHHHHHHHHHTTSTTEEEEEESSC
T ss_pred EEEEECHHHHHHHHHHHHCCC-----CCEEEE-------ECCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 999968888999999997489-----978963-------03889609999970985899999999876998328976488
Q ss_pred CC
Q ss_conf 67
Q gi|254781054|r 213 MV 214 (231)
Q Consensus 213 ~~ 214 (231)
..
T Consensus 78 ~~ 79 (95)
T 2jsx_A 78 QQ 79 (95)
T ss_dssp CC
T ss_pred EE
T ss_conf 71
No 96
>>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} (A:1-163)
Probab=32.75 E-value=35 Score=15.30 Aligned_cols=83 Identities=19% Similarity=0.081 Sum_probs=46.6
Q ss_pred HHHHHHHH-CCCEEEEEECHHHHH-------HHHHHCCCCCCCCCC--CCEEEEEECCHHCC---CCCCEEEECCCHHHH
Q ss_conf 99999873-287048961889999-------998731578655100--88007986330004---766058831657777
Q gi|254781054|r 37 ILLADKIA-NGFRVQVIPSSRNTE-------NFCKIHHIPLHSPED--VSSVDLSIDGFDEI---DSRLRLIKGYGGALL 103 (231)
Q Consensus 37 ~~L~~~~~-~~~~i~~v~tS~~t~-------~~a~~~gi~~~~l~~--~~~iDi~iDGaDev---d~~l~lIKGgGgAl~ 103 (231)
..|++.++ .+.+..+|..+...+ ..++..++.....+. .+..+-..+++.+. ..+.-.=-|||.++=
T Consensus 21 ~~l~~~l~~~g~r~livtd~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~t~~~v~~~~~~~~~~~~d~iiaiGGGs~~D 100 (163)
T 1jq5_A 21 TKIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLD 100 (163)
T ss_dssp GGHHHHHTTTCSEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 99999999769938999897578999999999998779969999849999999999999998742998899846860100
Q ss_pred HHHHHHHHHCCEEEEE
Q ss_conf 7879986102269996
Q gi|254781054|r 104 REKIIAHAASRFIVIG 119 (231)
Q Consensus 104 rEKiva~~a~~~I~i~ 119 (231)
--|.++.....-++.+
T Consensus 101 ~aK~~~~~~~~p~i~i 116 (163)
T 1jq5_A 101 TAKAVADELDAYIVIV 116 (163)
T ss_dssp HHHHHHHHHTCEEEEE
T ss_pred CHHHHHHCCCCCEEEE
T ss_conf 2011002047978997
No 97
>>2cyy_A Putative HTH-type transcriptional regulator PH1519; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} (A:58-151)
Probab=32.33 E-value=36 Score=15.25 Aligned_cols=65 Identities=12% Similarity=0.043 Sum_probs=50.7
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCE
Q ss_conf 72678725758999999863221489850377225886362578888998207986898999999627996866480
Q gi|254781054|r 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGL 209 (231)
Q Consensus 133 lPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~Gl 209 (231)
+=|++.|-....+.+.+.++ +++... ..+|=+.|+++-+.+.+..+..++-.+|..+|||..+--
T Consensus 14 v~i~~~~~~~~~v~~~l~~~-------p~V~~~-----~~~sG~~d~~~~v~~~d~~~l~~~i~~l~~~~gv~~~~t 78 (94)
T 2cyy_A 14 ILVKVKAGKYSEVASNLAKY-------PEIVEV-----YETTGDYDXVVKIRTKNSEELNNFLDLIGSIPGVEGTHT 78 (94)
T ss_dssp EEEEECTTCHHHHHHHHHTC-------TTEEEE-----EECSSSSSEEEEEEESSHHHHHHHHHHHHTSTTEEEEEE
T ss_pred EEEECCCCCCHHHHHHHCCC-------CCEEEE-----ECCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 98503553200334440478-------631671-----015788769999997999999999999846899408999
No 98
>>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function, uncharacterized protein, protein structure initiative; 2.52A {Agrobacterium tumefaciens str} (A:)
Probab=31.40 E-value=37 Score=15.16 Aligned_cols=57 Identities=12% Similarity=0.141 Sum_probs=41.2
Q ss_pred HCCCCCEEEECC--CHHHHHHHHHHHHHHH-CCCEEEEEECH------HHHHHHHHHCCCCCCCCC
Q ss_conf 389978998879--1789999999999873-28704896188------999999873157865510
Q gi|254781054|r 17 YVVDGMTLGMGT--GSTAKEFMILLADKIA-NGFRVQVIPSS------RNTENFCKIHHIPLHSPE 73 (231)
Q Consensus 17 ~v~~gmviGlGt--GSTv~~~i~~L~~~~~-~~~~i~~v~tS------~~t~~~a~~~gi~~~~l~ 73 (231)
+....-++|+|. |.+...+...+.+.++ .++.+..++|- ..-...|+++|+|+..++
T Consensus 6 l~P~~l~vGiGcrrg~~~e~i~~ai~~~L~~~~l~i~aiAti~~K~~E~~l~~~A~~lgvpl~~~~ 71 (155)
T 3by5_A 6 GQAXVTVAGIGCRKGAASDAIIAAVRAAERAFGVTVDYLATAPLKADEAGLAEAAKGLSLSLEIVA 71 (155)
T ss_dssp ----CEEEEEEECSSCCHHHHHHHHHHHHHHHTCCCCEEEESSCCSCCHHHHHHHHHTTCCEEECC
T ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHCCCCEEECC
T ss_conf 676259999640899899999999999999859980057638875679899999998099879808
No 99
>>2e1c_A Putative HTH-type transcriptional regulator PH1519; DNA-binding; HET: DNA; 2.10A {Pyrococcus horikoshii OT3} (A:78-171)
Probab=31.29 E-value=37 Score=15.15 Aligned_cols=64 Identities=13% Similarity=0.039 Sum_probs=50.4
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECC
Q ss_conf 7267872575899999986322148985037722588636257888899820798689899999962799686648
Q gi|254781054|r 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHG 208 (231)
Q Consensus 133 lPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~G 208 (231)
+=+.+-|.....+.+.+.+ .++++... .+|-..|+++=+++.+..+...+-.+|..+|||-..-
T Consensus 14 v~i~v~~~~~~~~~~~l~~-------~p~V~~~~-----~~sG~~dl~~~v~~~~~~~l~~~i~~l~~~~gv~~~~ 77 (94)
T 2e1c_A 14 ILVKVKAGKYSEVASNLAK-------YPEIVEVY-----ETTGDYDMVVKIRTKNSEELNNFLDLIGSIPGVEGTH 77 (94)
T ss_dssp EEEEECTTCHHHHHHHHHT-------STTEEEEE-----ECSSSSSEEEEEEESSHHHHHHHHHHHHHSTTEEEEE
T ss_pred EEECCCCCHHHHHHHHHCC-------CCCEEEEE-----CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9850454102233454147-------97478840-----1578886999999799999999999984689940899
No 100
>>2p1z_A Phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.44A {Corynebacterium diphtheriae NCTC13129} (A:)
Probab=30.72 E-value=23 Score=16.39 Aligned_cols=109 Identities=9% Similarity=-0.048 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHHHC-CCEEE-EEECH--HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCC---C------EE
Q ss_conf 917899999999998732-87048-96188--999999873157865510088007986330004766---0------58
Q gi|254781054|r 28 TGSTAKEFMILLADKIAN-GFRVQ-VIPSS--RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSR---L------RL 94 (231)
Q Consensus 28 tGSTv~~~i~~L~~~~~~-~~~i~-~v~tS--~~t~~~a~~~gi~~~~l~~~~~iDi~iDGaDevd~~---l------~l 94 (231)
-+.....+.+.|+++... ..+.. +.+++ ......+.++++|........+-.-...+...+.+. . ++
T Consensus 44 ~~~~~~~~~~~la~~~~~~~~d~V~g~~~ggi~~a~~~a~~l~~~~~~~~k~~~~~~~~~~~~~~~~~~~G~~vliVDDi 123 (180)
T 2p1z_A 44 HARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVXHADGREIHAFVVRKEAKKHGXQRRIEGPDVVGKKVLVVEDT 123 (180)
T ss_dssp SHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-CC-CCSEESSCCTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCCCCCCCCCCCEEEHHHH
T ss_conf 28899987799998632334147841233421466768887613686389975043100000100132455324334878
Q ss_pred EECCCHHHHHHH-HHHHHHCCEEEEEEHHHC---CCCCCCCCCCEE
Q ss_conf 831657777787-998610226999623035---134557887267
Q gi|254781054|r 95 IKGYGGALLREK-IIAHAASRFIVIGDESKR---VDFLGRGMLPIE 136 (231)
Q Consensus 95 IKGgGgAl~rEK-iva~~a~~~I~i~D~sK~---v~~Lg~~plPVE 136 (231)
|-.||-..---+ +-..-|+..-+.+=..+. .++|....+|++
T Consensus 124 i~tG~T~~~~~~~l~~~Ga~~v~~~~~~~~~~~~~~~l~~~~~~i~ 169 (180)
T 2p1z_A 124 TTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYR 169 (180)
T ss_dssp CSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHCCCCEE
T ss_conf 7765659999999998799799999999888685889986799799
No 101
>>1wyz_A Putative S-adenosylmethionine-dependent methytransferase; northeast structural genomics consortium, BTR28; 2.50A {Bacteroides thetaiotaomicron vpi-5482} (A:1-120)
Probab=30.44 E-value=31 Score=15.61 Aligned_cols=101 Identities=14% Similarity=0.091 Sum_probs=44.6
Q ss_pred EEEECCCHH--HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCCCEEEECCCH
Q ss_conf 998879178--999999999987328704896188999999873157865510088007986330004766058831657
Q gi|254781054|r 23 TLGMGTGST--AKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGG 100 (231)
Q Consensus 23 viGlGtGST--v~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi~iDGaDevd~~l~lIKGgGg 100 (231)
+||+|-|.+ -.+.-..- .+.-+..++.+++.+...+..+........- ... .....-+-.++
T Consensus 7 ~VG~GpGd~~~pd~iT~~a-~~~l~~advi~~~~~~~~~~~l~~~~~~~~~-~~~-~~~~~~~~~~~------------- 70 (120)
T 1wyz_A 7 LLPVTLGDTPLEQVLPSYN-TEIIRGIRHFIVEDVRSARRFLKKVDREIDI-DSL-TFYPLNKHTSP------------- 70 (120)
T ss_dssp EECCCSSSSCHHHHSCTHH-HHHHTTCCEEEESCHHHHHHHHHHHCSSSCT-TCC-CCEECCSSCCH-------------
T ss_pred EECCCCCCCCHHHHCCHHH-HHHHHHCCEEEEEECHHHHHHHHHHCCCCCC-CHH-HHHHHHHHHHH-------------
T ss_conf 9867887876033318999-9999859999998478999999980886553-222-33213456777-------------
Q ss_pred HHHHHHHH-HHHHCCEEEEEEHH---------HCCCCCCCCCCCEEEEE
Q ss_conf 77778799-86102269996230---------35134557887267872
Q gi|254781054|r 101 ALLREKII-AHAASRFIVIGDES---------KRVDFLGRGMLPIEIDQ 139 (231)
Q Consensus 101 Al~rEKiv-a~~a~~~I~i~D~s---------K~v~~Lg~~plPVEV~p 139 (231)
--..|-+. +....+.+++.+.. .+++.+...-+|+||+|
T Consensus 71 ~~~~~~~~~~~~~g~~v~~l~~GDP~~y~~~~~l~~~~~~~gi~v~viP 119 (120)
T 1wyz_A 71 EDISGYLKPLAGGASXGVISEAGCPAVADPGADVVAIAQRQKLKVIPLV 119 (120)
T ss_dssp HHHHHHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCEECCHHHHHHHHHHCCCCCCCCCC
T ss_conf 7666666887539639999622431022525653333211342200023
No 102
>>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} (A:55-141)
Probab=29.94 E-value=39 Score=15.00 Aligned_cols=64 Identities=14% Similarity=0.034 Sum_probs=47.2
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHH-HHHHCCCCEEECC
Q ss_conf 726787257589999998632214898503772258863625788889982079868989999-9962799686648
Q gi|254781054|r 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS-GELCNIPGVIEHG 208 (231)
Q Consensus 133 lPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le-~~L~~IpGVVe~G 208 (231)
+=|.+-|..+..+.+.|+++ +++.... .+|-..++++-+++.+..+..++- ..|..+|||..+-
T Consensus 14 i~i~~~~~~~~~~~~~l~~~-------p~V~~~~-----~vtG~~d~i~~v~~~~~~~l~~~i~~~l~~~~gv~~~~ 78 (87)
T 1i1g_A 14 TGVDTKPEKLFEVAEKLKEY-------DFVKELY-----LSSGDHMIMAVIWAKDGEDLAEIISNKIGKIEGVTKVC 78 (87)
T ss_dssp EEEEECGGGHHHHHHHHHHS-------TTEEEEC-----CCSSSSSEEEEEEESSHHHHHHHHHHTTTTSTTEEEEE
T ss_pred EEEECCCCHHHHHHHHHCCC-------CCEEEEE-----EEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 99622530267777762279-------7189988-----86379989999998999999999999863599973899
No 103
>>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} (A:384-452)
Probab=29.45 E-value=9.4 Score=18.85 Aligned_cols=29 Identities=34% Similarity=0.622 Sum_probs=19.4
Q ss_pred CCEEEEEECCHHCC---CCCCEE-EE-CCCHHHH
Q ss_conf 88007986330004---766058-83-1657777
Q gi|254781054|r 75 VSSVDLSIDGFDEI---DSRLRL-IK-GYGGALL 103 (231)
Q Consensus 75 ~~~iDi~iDGaDev---d~~l~l-IK-GgGgAl~ 103 (231)
+...|+-+||-+|| ++.+++ || ..||.++
T Consensus 5 ~~~~D~D~DG~~Ei~l~~~~~~~~~~p~~gGsl~ 38 (69)
T 1k1x_A 5 NKILDVDFDGRAEIMVENDGFIATIKPHYGGSIF 38 (69)
T ss_dssp CEEECSSSSSSCEEEEECSSEEEEEETTTTTEEE
T ss_pred CEEECCCCCCCEEEEEECCCEEEEEECCCCCEEE
T ss_conf 3541347899868999769668999138984799
No 104
>>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, manic, transferase; HET: 680; 1.83A {Bacillus anthracis str} (A:)
Probab=29.30 E-value=40 Score=14.94 Aligned_cols=63 Identities=11% Similarity=0.128 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHCCCC-CEEEECCCHH---------------HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCC
Q ss_conf 999999999838997-8998879178---------------999999999987328704896188999999873157865
Q gi|254781054|r 7 KRNAARRAIQYVVDG-MTLGMGTGST---------------AKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLH 70 (231)
Q Consensus 7 K~~~a~~A~~~v~~g-mviGlGtGST---------------v~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~ 70 (231)
-..+.+.|.++++.| .+|-+|.+|| ...+++.|.+.. ..-+.+=+++......|.+.|.+++
T Consensus 62 ~~~~~~~a~~~~~~GAdiIDig~~st~P~~~~v~~~~E~~rl~~vi~~i~~~~--~~pisIDT~~~~v~e~al~~G~~iI 139 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV--KLPISIDTYKAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS--CSCEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC--CCEEEEEEECHHHHHHHHHCCCEEE
T ss_conf 99999999999987998999788354653314775778989888999864035--5136555222898888966596488
Q ss_pred C
Q ss_conf 5
Q gi|254781054|r 71 S 71 (231)
Q Consensus 71 ~ 71 (231)
-
T Consensus 140 N 140 (297)
T 1tx2_A 140 N 140 (297)
T ss_dssp E
T ss_pred E
T ss_conf 7
No 105
>>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum 3D7} (A:227-394)
Probab=28.83 E-value=41 Score=14.88 Aligned_cols=89 Identities=11% Similarity=0.105 Sum_probs=62.3
Q ss_pred HCCCCCEEE-ECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCCCEEE
Q ss_conf 389978998-8791789999999999873287048961889999998731578655100880079863300047660588
Q gi|254781054|r 17 YVVDGMTLG-MGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLI 95 (231)
Q Consensus 17 ~v~~gmviG-lGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi~iDGaDevd~~l~lI 95 (231)
+--.|++|| +|-|+.-..+.+.|.. .|.++.++.++..+...+...+....++++. +..||-|--.+
T Consensus 27 ~~l~gk~vgiiG~G~iG~~~A~~l~~---~G~~V~~~~~~~~~~~~~~~~~~~~~~~~e~------l~~aDiv~~~~--- 94 (168)
T 1v8b_A 27 FLISGKIVVICGYGDVGKGCASSMKG---LGARVYITEIDPICAIQAVMEGFNVVTLDEI------VDKGDFFITCT--- 94 (168)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHH---HTCEEEEECSCHHHHHHHHTTTCEECCHHHH------TTTCSEEEECC---
T ss_pred CEECCCEEEEEECCCCCHHHHHHHHH---CCCEEEEEECCHHHHHHHHHCCCCCCCCCCC------CCCCCEEEEEC---
T ss_conf 23347359998304322306778884---8998999956707789999738713443233------45376999926---
Q ss_pred ECCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 316577777879986102269996
Q gi|254781054|r 96 KGYGGALLREKIIAHAASRFIVIG 119 (231)
Q Consensus 96 KGgGgAl~rEKiva~~a~~~I~i~ 119 (231)
....++.++.++.+-+.-++|-
T Consensus 95 --p~~~~i~~~~l~~mk~ga~liN 116 (168)
T 1v8b_A 95 --GNVDVIKLEHLLKMKNNAVVGN 116 (168)
T ss_dssp --SSSSSBCHHHHTTCCTTCEEEE
T ss_pred --CCCCCCHHHHHHHHCCCCEEEE
T ss_conf --8866210999997558918994
No 106
>>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori} (A:1-160)
Probab=28.32 E-value=42 Score=14.83 Aligned_cols=13 Identities=15% Similarity=0.534 Sum_probs=5.3
Q ss_pred CCEEEECCCHHHH
Q ss_conf 7899887917899
Q gi|254781054|r 21 GMTLGMGTGSTAK 33 (231)
Q Consensus 21 gmviGlGtGSTv~ 33 (231)
.-+|++|.||+..
T Consensus 87 d~iiaiGGGs~~D 99 (160)
T 3clh_A 87 SLMIALGGGVISD 99 (160)
T ss_dssp CEEEEEESHHHHH
T ss_pred CCEEEECCHHHHH
T ss_conf 4135542358889
No 107
>>1lql_A OSMC, osmotical inducible protein C like family; NEW fold, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.85A {Mycoplasma pneumoniae} (A:1-66)
Probab=27.43 E-value=17 Score=17.20 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=15.9
Q ss_pred CCEEEEEECCHHCCCCCCEEEECCCH
Q ss_conf 88007986330004766058831657
Q gi|254781054|r 75 VSSVDLSIDGFDEIDSRLRLIKGYGG 100 (231)
Q Consensus 75 ~~~iDi~iDGaDevd~~l~lIKGgGg 100 (231)
...+|+++|+.|+ +++||+|-
T Consensus 46 ~~~~dI~~~~~d~-----QLvkG~G~ 66 (66)
T 1lql_A 46 SDQFQITLDARPK-----HTAKGFGP 66 (66)
T ss_dssp ETTEEEEECCSCT-----TTCSSCCH
T ss_pred CCCCEEEECCCCC-----CCCCCCCH
T ss_conf 8775697358999-----89999499
No 108
>>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics, protein structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} (A:)
Probab=26.93 E-value=44 Score=14.68 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHCCCCCE---EEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH----HHHHCCC
Q ss_conf 999999999983899789---9887917899999999998732870489618899999----9873157
Q gi|254781054|r 6 MKRNAARRAIQYVVDGMT---LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN----FCKIHHI 67 (231)
Q Consensus 6 ~K~~~a~~A~~~v~~gmv---iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~----~a~~~gi 67 (231)
.-+.+..-...++++|+. +|-|||..+.++. ++...+..++++--|..... .++++|+
T Consensus 8 ~~~~~~~l~~~~~~~g~~VLDiGcG~G~~~~~la----~~~~~~~~v~~iDis~~~i~~a~~~~~~~g~ 72 (197)
T 3eey_A 8 SLGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLA----SLVGENGRVFGFDIQDKAIANTTKKLTDLNL 72 (197)
T ss_dssp HHHHHHHHHHHHCCTTCEEEESCCTTSHHHHHHH----HHHCTTCEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHH----HHHCCCCEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf 8999999999658999999999625889999999----9747786067724658999999999998255
No 109
>>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme-ligand complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} (X:258-341)
Probab=26.91 E-value=44 Score=14.67 Aligned_cols=38 Identities=5% Similarity=-0.188 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCC
Q ss_conf 99999999873287048961889999998731578655
Q gi|254781054|r 34 EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHS 71 (231)
Q Consensus 34 ~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~ 71 (231)
.+.++|.++-..+.-+.-|.||......|+++|.++..
T Consensus 9 l~a~~ll~~~~~~~vv~~v~ss~~~~~ia~~~G~~~~~ 46 (84)
T 1p5d_X 9 LFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVM 46 (84)
T ss_dssp HHHHHHHHHSTTCEEEEETTSCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCEEEE
T ss_conf 99999997388997202530207899999977998999
No 110
>>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, NPPSFA; 2.40A {Thermus thermophilus HB8} (A:)
Probab=26.72 E-value=45 Score=14.65 Aligned_cols=66 Identities=11% Similarity=0.006 Sum_probs=48.0
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHH-HHHHCCCCEEECCEE
Q ss_conf 726787257589999998632214898503772258863625788889982079868989999-996279968664802
Q gi|254781054|r 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS-GELCNIPGVIEHGLF 210 (231)
Q Consensus 133 lPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le-~~L~~IpGVVe~GlF 210 (231)
+=|++.|-+...+.+.+++ -++++.. ..+|-..++++-+...+..+...+- ..|..+|||-++--+
T Consensus 6 v~v~~~~~~~~~~~~~l~~-------~peV~~~-----~~vtG~~d~~~~v~~~d~~~l~~~i~~~l~~~~gV~~~~T~ 72 (92)
T 2djw_A 6 VLIRPRGNRVQALGEAIAE-------LPQVAEV-----YSVTGPYDLVALVRLKDVEELDDVVTQGILSLEGVERTETL 72 (92)
T ss_dssp EEEEECGGGHHHHHHHHTT-------STTEEEE-----EEESSSSSEEEEEEESSGGGHHHHCCCCCTTSTTEEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHC-------CCCEEEE-----EEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 9999787989999999976-------9898789-----89858898999999899999999999986359998179999
No 111
>>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} (A:39-171)
Probab=26.24 E-value=46 Score=14.60 Aligned_cols=107 Identities=12% Similarity=0.085 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHC-CCE---EEEEEC--HHHHHHHHHHCCCCCCCCCCC---CEEEEEECCHHCCCCCC----EEEECC
Q ss_conf 99999999998732-870---489618--899999987315786551008---80079863300047660----588316
Q gi|254781054|r 32 AKEFMILLADKIAN-GFR---VQVIPS--SRNTENFCKIHHIPLHSPEDV---SSVDLSIDGFDEIDSRL----RLIKGY 98 (231)
Q Consensus 32 v~~~i~~L~~~~~~-~~~---i~~v~t--S~~t~~~a~~~gi~~~~l~~~---~~iDi~iDGaDevd~~l----~lIKGg 98 (231)
...+.+.|++++++ +.+ +.++++ -.....++..+++|..-.... ........++|-=..+- ++|-.|
T Consensus 7 ~~~~~~~la~~i~~~~~~~~~iv~~~~gg~~~a~~la~~l~~~~~~~~k~~~~~~~~~~~~~~~~~G~~VliVDDii~tG 86 (133)
T 2wns_A 7 LSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSG 86 (133)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTTSSSCCSEESCCCTTCBEEEEEEEESSS
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEEEHHC
T ss_conf 99999999999997199878899537663899999999849838997236777673047725778999999998650125
Q ss_pred CHHHHHHHHH-HHHHCCEEEEEEHHHC---CCCCCCCCCCEEEE
Q ss_conf 5777778799-8610226999623035---13455788726787
Q gi|254781054|r 99 GGALLREKII-AHAASRFIVIGDESKR---VDFLGRGMLPIEID 138 (231)
Q Consensus 99 GgAl~rEKiv-a~~a~~~I~i~D~sK~---v~~Lg~~plPVEV~ 138 (231)
|-..---+.+ ..-++..-+.+-..|. .+.|....+|++.+
T Consensus 87 ~T~~~~~~~l~~~ga~~v~~~vl~~~~~~~~~~l~~~~v~~~~l 130 (133)
T 2wns_A 87 SSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSV 130 (133)
T ss_dssp HHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHCCCCEEEE
T ss_conf 67999999999879979999999978835589999769968996
No 112
>>3hn0_A Nitrate transport protein; YP_001302749.1, structural genomics, joint center for structural genomics, JCSG; 1.75A {Parabacteroides distasonis} (A:86-177,A:250-283)
Probab=25.92 E-value=46 Score=14.56 Aligned_cols=44 Identities=7% Similarity=-0.063 Sum_probs=29.2
Q ss_pred CCCEEEECC-CHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
Q ss_conf 978998879-17899999999998732870489618899999987
Q gi|254781054|r 20 DGMTLGMGT-GSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63 (231)
Q Consensus 20 ~gmviGlGt-GSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~ 63 (231)
.|..||++. ||+..+++.++.+...-..++..+..+......+-
T Consensus 10 kGKkIav~~~Gs~~~~~l~~ll~~~Gl~~Dv~i~~~~~~~~~~AL 54 (126)
T 3hn0_A 10 KEPALYVFGNGTTPDILTRYYLGRQRLDYPLNYAFNTAGEITQGI 54 (126)
T ss_dssp CSCCEECSSTTSHHHHHHHHHHHHHTCCCCEECSCCSHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH
T ss_conf 999999818998899999999986799864356415878998887
No 113
>>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} (A:1-160)
Probab=24.73 E-value=49 Score=14.43 Aligned_cols=31 Identities=26% Similarity=0.163 Sum_probs=17.8
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 7660588316577777879986102269996
Q gi|254781054|r 89 DSRLRLIKGYGGALLREKIIAHAASRFIVIG 119 (231)
Q Consensus 89 d~~l~lIKGgGgAl~rEKiva~~a~~~I~i~ 119 (231)
+.+.-+==|||..+=-=|.+|.....-++++
T Consensus 88 ~~D~iiaiGGGs~~D~aK~~A~~~~~p~i~~ 118 (160)
T 3iv7_A 88 EIDLLVCVGGGSTIGLAKAIAXTTALPIVAI 118 (160)
T ss_dssp TCCEEEEEESHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHCCCCCEEC
T ss_conf 7988999346644226667553034552100
No 114
>>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.00A {Chromobacterium violaceum atcc 12472} (A:)
Probab=24.62 E-value=36 Score=15.20 Aligned_cols=90 Identities=13% Similarity=0.088 Sum_probs=49.9
Q ss_pred HHHHHHCCEEEEEEHHHCCCCCCCCCCCEEEEECC-HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECC
Q ss_conf 99861022699962303513455788726787257-58999999863221489850377225886362578888998207
Q gi|254781054|r 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFG-VNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185 (231)
Q Consensus 107 iva~~a~~~I~i~D~sK~v~~Lg~~plPVEV~p~~-~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~ 185 (231)
++...-.+=|++.|=++.+..- .|-+=...-... .......+.+.++..+..+.-+.+...+..++-|-||+++-++.
T Consensus 13 ~l~~~ka~DI~vidv~~~~~~~-dy~VI~T~~S~rh~~aia~~i~~~~k~~~~~~~~~eG~~~~~W~liD~g~ivVHif~ 91 (130)
T 2id1_A 13 ALEDIKGKDIIELDTSKLTSLF-QRXIVATGDSNRQVKALANSVQVKLKEAGVDIVGSEGHESGEWVLVDAGDVVVHVXL 91 (130)
T ss_dssp HHHHTTCEEEEEEEGGGTCSSC-SEEEEEECSSHHHHHHHHHHHHHHHHHTTCCCCBCCSTTTSSEEEEEETTEEEEEEC
T ss_pred HHHHCCCCCEEEEECCCCCCHH-HEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECC
T ss_conf 9997388863999788986243-167997754679999999999999998399651036887899899965816897289
Q ss_pred CCCCCHHHHHHH
Q ss_conf 986898999999
Q gi|254781054|r 186 GFIPDPQIISGE 197 (231)
Q Consensus 186 ~~i~dp~~le~~ 197 (231)
+..-+-+.||.-
T Consensus 92 ~e~Re~Y~LE~L 103 (130)
T 2id1_A 92 PAVRDYYDIEAL 103 (130)
T ss_dssp HHHHHHHCHHHH
T ss_pred HHHHHHCCHHHH
T ss_conf 899877488988
No 115
>>1kq3_A Glycerol dehydrogenase; zinc, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.50A {Thermotoga maritima} (A:20-169)
Probab=24.22 E-value=50 Score=14.36 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=20.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 7660588316577777879986102269996
Q gi|254781054|r 89 DSRLRLIKGYGGALLREKIIAHAASRFIVIG 119 (231)
Q Consensus 89 d~~l~lIKGgGgAl~rEKiva~~a~~~I~i~ 119 (231)
+.++-.==|||-.+=-=|.+|+....-++.+
T Consensus 75 ~~d~iiaiGGGsv~D~aK~~a~~~~~~~i~v 105 (150)
T 1kq3_A 75 ETDVVVGIGGGKTLDTAKAVAYKLKKPVVIV 105 (150)
T ss_dssp TCCEEEEEESHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 9998999479602110268874147872885
No 116
>>3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, PSI-2, protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis} (A:133-175)
Probab=23.86 E-value=42 Score=14.84 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHC
Q ss_conf 8899999987315786551008800798633000
Q gi|254781054|r 54 SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDE 87 (231)
Q Consensus 54 tS~~t~~~a~~~gi~~~~l~~~~~iDi~iDGaDe 87 (231)
|..-+-.+++.+|+. +.-|++||||-.
T Consensus 10 snlpslrlaerlgfr-------gysdvafdgaah 36 (43)
T 3juw_A 10 SNLPSLRLAERLGFR-------GYSDVAFDGAAH 36 (43)
T ss_dssp TCHHHHHHHHHTTCE-------EEEEEEETTEEE
T ss_pred CCHHHHHHHHHCCCE-------EEEEEEECCCEE
T ss_conf 899999999988998-------986999999689
No 117
>>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} (A:)
Probab=23.86 E-value=51 Score=14.32 Aligned_cols=81 Identities=14% Similarity=0.121 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCC---------------------CEEEEEE---CHHHHHHHH
Q ss_conf 9999999998389978998879178999999999987328---------------------7048961---889999998
Q gi|254781054|r 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG---------------------FRVQVIP---SSRNTENFC 62 (231)
Q Consensus 7 K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~---------------------~~i~~v~---tS~~t~~~a 62 (231)
+-..|..++..++.|.++=+||-......++..+.+.... .++.++. .+...-.+|
T Consensus 55 ~L~~A~~~i~~~~~~~iLfV~t~~~~~~~i~~~a~~~~~~~v~~rw~gG~LTN~~~~~~~~P~liii~d~~~~~~ai~Ea 134 (208)
T 1vi6_A 55 RIRVAAKFLSRYEPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPMLSEYREPEVVFVNDPAIDKQAVSEA 134 (208)
T ss_dssp HHHHHHHHHTTSCGGGEEEEECSGGGHHHHHHHHHHHCCEEEESSCCTTTTTCTTSTTCCCCSEEEESCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEECCCCHHHHHHHH
T ss_conf 99999999975134755787225307789999997359975456455776555777531013279997676107899999
Q ss_pred HHCCCCCCCCCCC----CEEEEEECCHHC
Q ss_conf 7315786551008----800798633000
Q gi|254781054|r 63 KIHHIPLHSPEDV----SSVDLSIDGFDE 87 (231)
Q Consensus 63 ~~~gi~~~~l~~~----~~iDi~iDGaDe 87 (231)
..+|||++.+-+. ..+|..|=|-|.
T Consensus 135 ~~l~IP~Ial~DTn~~p~~idypIP~Nd~ 163 (208)
T 1vi6_A 135 TAVGIPVVALCDSNNSSADVDLVIPTNNK 163 (208)
T ss_dssp HHTTCCEEEEECTTCCCTTCSEEEESCCS
T ss_pred HHCCCCEEEEECCCCCCCCCCEEEECCCC
T ss_conf 86389736760367895358878979787
No 118
>>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, helicase, hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* (A:1-301)
Probab=23.54 E-value=51 Score=14.28 Aligned_cols=115 Identities=17% Similarity=0.086 Sum_probs=56.6
Q ss_pred HHHHHHCCCC---CEEEE---CCCHHHHHHHHHHHHHHHCC-------CEEEEEECHH---HHHHHHHHCCCCCCCCCCC
Q ss_conf 9999838997---89988---79178999999999987328-------7048961889---9999987315786551008
Q gi|254781054|r 12 RRAIQYVVDG---MTLGM---GTGSTAKEFMILLADKIANG-------FRVQVIPSSR---NTENFCKIHHIPLHSPEDV 75 (231)
Q Consensus 12 ~~A~~~v~~g---mviGl---GtGSTv~~~i~~L~~~~~~~-------~~i~~v~tS~---~t~~~a~~~gi~~~~l~~~ 75 (231)
.+|+-.+-.| -+|+. |||-|..|+|..|....... ..+..+||-. +....+..+.-.+.....+
T Consensus 100 ~~aIp~il~G~~rDvi~~A~TGSGKTlafllPil~~l~~~~~~~~~~~~~lil~PtreLa~qi~~~~~~l~~~~~~~~~~ 179 (301)
T 3i5x_A 100 QKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKY 179 (301)
T ss_dssp HHHHHHHHSSSSEEEEEECCTTSCHHHHHHHHHHHHHHHTTTSSTTSCCEEEECSSHHHHHHHHHHHHHHHHHCGGGTTS
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 99999997599998899899997199999999999975233356777234223868999999999999988633476632
Q ss_pred CEEEEEECCHHCCC------CCCEEEECCCH---HHHHHHHHHHHHCCEEEEEEHHHCCC
Q ss_conf 80079863300047------66058831657---77778799861022699962303513
Q gi|254781054|r 76 SSVDLSIDGFDEID------SRLRLIKGYGG---ALLREKIIAHAASRFIVIGDESKRVD 126 (231)
Q Consensus 76 ~~iDi~iDGaDevd------~~l~lIKGgGg---Al~rEKiva~~a~~~I~i~D~sK~v~ 126 (231)
-...++-.+..... ...+.+-+..| .+++...+.......+++.||-...-
T Consensus 180 ~~~~~~gg~~~~~~~~~~~~~~~~i~v~tp~rl~~~~~~~~~~~~~~~~~~VlDEaD~ll 239 (301)
T 3i5x_A 180 ACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLL 239 (301)
T ss_dssp CEEEECTTSCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHHHCTTCCEEEEETHHHHT
T ss_pred EEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECHHHHHH
T ss_conf 689873146513666541023343112333221001102322211202345411034310
No 119
>>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 intergenic region; yeast hypothetical protein, structural genomics, selenomethionine, PSI; 1.94A {Saccharomyces cerevisiae} (A:)
Probab=23.36 E-value=52 Score=14.26 Aligned_cols=117 Identities=15% Similarity=0.055 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHHHHCC--------------CCCEEEECCCHHHHHHHHHHHHHH-HCCCEEEEEEC--H------HHH
Q ss_conf 878999999999998389--------------978998879178999999999987-32870489618--8------999
Q gi|254781054|r 2 DALQMKRNAARRAIQYVV--------------DGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPS--S------RNT 58 (231)
Q Consensus 2 ~~~~~K~~~a~~A~~~v~--------------~gmviGlGtGSTv~~~i~~L~~~~-~~~~~i~~v~t--S------~~t 58 (231)
+...+.++||+.+++++. +--.|=.|+|-.-.--+ .+|+++ +.|.+++++-+ + ...
T Consensus 27 ~~~~LME~Ag~~va~~i~~~~~~~~~~~~~~~~~v~vl~G~GnNGGDgl-~~Ar~L~~~G~~V~v~~~~~~~~~~~~~~~ 105 (246)
T 1jzt_A 27 TLQQLXELAGFSVAQAVCRQFPLRGKTETEKGKHVFVIAGPGNNGGDGL-VCARHLKLFGYNPVVFYPKRSERTEFYKQL 105 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCCSSCCHHHHTCEEEEEECSSHHHHHHH-HHHHHHHHTTCCEEEECCCCCTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHH-HHHHHHHHCCCEEEEEEECCCCCCHHHHHH
T ss_conf 9999999999999999999755333222357984999988999847799-999999977984799984786589999999
Q ss_pred HHHHHHCCCCCCCC--------CCCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEH
Q ss_conf 99987315786551--------0088007986330004766058831657777787998610226999623
Q gi|254781054|r 59 ENFCKIHHIPLHSP--------EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121 (231)
Q Consensus 59 ~~~a~~~gi~~~~l--------~~~~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~ 121 (231)
...+++.+.++... .....-|+.|||-==.--+. -+++-= +-+-+.+=+..++-+|+=+|=
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIDal~G~G~~~-~l~~~~-~~li~~iN~~~~~~~viaiDi 174 (246)
T 1jzt_A 106 VHQLNFFKVPVLSQDEGNWLEYLKPEKTLCIVDAIFGFSFKP-PXREPF-KGIVEELCKVQNIIPIVSVDV 174 (246)
T ss_dssp HHHHHHTTCCEECSSTTCGGGGGSTTTEEEEEEESCCTTCCS-SCCTTH-HHHHHHHHHHTTTSCEEEESS
T ss_pred HHHHHHCCCCEECCCCCCHHHCCCCCCCCEEEEEECCCCCCC-CCCHHH-HHHHHHHHHCCCCCCEEEEEC
T ss_conf 999877698642255320121046555748999510366677-764899-999999997179984899847
No 120
>>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal complex, isomerase; 2.00A {Pyrococcus horikoshii} (A:261-337)
Probab=22.65 E-value=53 Score=14.17 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCC
Q ss_conf 9999999999873287048961889999998731578655
Q gi|254781054|r 32 AKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHS 71 (231)
Q Consensus 32 v~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~ 71 (231)
...+.+++.++-..+.-+.-++||...+..|+++|.++..
T Consensus 5 ~~l~a~~~l~~~~~~~vv~~v~sS~~~~~~~~~~G~~~~~ 44 (77)
T 1wqa_A 5 FALVADAVLKEKGGGLLVTTVATSNLLDDIAKKHGAKVMR 44 (77)
T ss_dssp HHHHHHHHHHHHTSCEEEEETTSCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 3456666530012466566743330789999972984231
No 121
>>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} (A:22-205)
Probab=22.42 E-value=54 Score=14.15 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHHHHCCC----C--CEEEECCCHHHHHHHHHHHHHHH-CCCEEEEEEC------HHHHHHHHHHCCC
Q ss_conf 98789999999999983899----7--89988791789999999999873-2870489618------8999999873157
Q gi|254781054|r 1 MDALQMKRNAARRAIQYVVD----G--MTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPS------SRNTENFCKIHHI 67 (231)
Q Consensus 1 M~~~~~K~~~a~~A~~~v~~----g--mviGlGtGSTv~~~i~~L~~~~~-~~~~i~~v~t------S~~t~~~a~~~gi 67 (231)
++..++.++|++.+.+++.. . -+|=.|.|-.-.--+ .+|++++ .|..+.++++ +......++..++
T Consensus 1 i~~~~LME~Ag~~~a~~i~~~~~~~~~v~vl~G~GnNGGDGl-v~Ar~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
T 3k5w_A 1 LSEDILXENAAXALERAVLQNASLGAKVIILCGSGDNGGDGY-ALARRLVGRFRVLVFEXKLTKSPXCQLQKERAKKAGV 79 (184)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSCTTCEEEEEECSSHHHHHHH-HHHHHHBTTBEEEEEESSCCCSHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH-HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
T ss_conf 399999999999999999970899995999985884899999-9999987699889998379899899999999986799
Q ss_pred CCCCCCC-----CCEEEEEECCHHCCCCCC
Q ss_conf 8655100-----880079863300047660
Q gi|254781054|r 68 PLHSPED-----VSSVDLSIDGFDEIDSRL 92 (231)
Q Consensus 68 ~~~~l~~-----~~~iDi~iDGaDevd~~l 92 (231)
++.+... ....|+.||+--=..-+.
T Consensus 80 ~~~~~~~~~~~~~~~~dliIDal~G~G~~~ 109 (184)
T 3k5w_A 80 VIKTYEENALNQNLECDVLIDCVIGSHFKG 109 (184)
T ss_dssp EEEECCCC----CCCEEEEEEESCCTTCCS
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 601568222222445546862000456775
No 122
>>1ta9_A Glycerol dehydrogenase; oxidoreductase; 1.90A {Schizosaccharomyces pombe} (A:1-219)
Probab=21.88 E-value=55 Score=14.08 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=10.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHHCCEEE
Q ss_conf 605883165777778799861022699
Q gi|254781054|r 91 RLRLIKGYGGALLREKIIAHAASRFIV 117 (231)
Q Consensus 91 ~l~lIKGgGgAl~rEKiva~~a~~~I~ 117 (231)
+.-+==|||.++=-=|.+|.....-++
T Consensus 147 d~iIaiGGGsv~D~aK~~a~~~~~p~i 173 (219)
T 1ta9_A 147 QVIIGVGGGKTMDSAKYIAHSMNLPSI 173 (219)
T ss_dssp CEEEEEESHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEECCCHHHHHHHCCCCCCCCEEE
T ss_conf 989995795376521012245552035
No 123
>>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural genomics, JCSG, protein structure initiative, PSI; HET: NAP; 1.78A {Thermotoga maritima MSB8} (A:1-193)
Probab=21.66 E-value=56 Score=14.05 Aligned_cols=82 Identities=18% Similarity=-0.043 Sum_probs=47.2
Q ss_pred HHHHHHCCCCCCCCCCC---CEEEEEECCHHC---CCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCC
Q ss_conf 99987315786551008---800798633000---476605883165777778799861022699962303513455788
Q gi|254781054|r 59 ENFCKIHHIPLHSPEDV---SSVDLSIDGFDE---IDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132 (231)
Q Consensus 59 ~~~a~~~gi~~~~l~~~---~~iDi~iDGaDe---vd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~p 132 (231)
...+.+.|+.+..++.. +..+-..+.+++ .+.+.-.==|||-++=-=|.+|.....-.-..|....-... +-+
T Consensus 65 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~D~IIaiGGGs~~D~aK~~a~~~~~~~~~~~~~~~~~~~-~~~ 143 (193)
T 1vlj_A 65 VDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQI-EKA 143 (193)
T ss_dssp HHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCC-CCC
T ss_pred HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCC-CCC
T ss_conf 9999865991999867169999999999999861358875752388631146788899875268899984466643-556
Q ss_pred CCEEEEECC
Q ss_conf 726787257
Q gi|254781054|r 133 LPIEIDQFG 141 (231)
Q Consensus 133 lPVEV~p~~ 141 (231)
+|.=.+|-.
T Consensus 144 ~p~i~VPTt 152 (193)
T 1vlj_A 144 LPIFDVLTI 152 (193)
T ss_dssp CCEEEEECS
T ss_pred CCEEEECCC
T ss_conf 874452266
No 124
>>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} (A:1-10,A:35-178)
Probab=21.47 E-value=28 Score=15.95 Aligned_cols=114 Identities=11% Similarity=-0.040 Sum_probs=54.2
Q ss_pred EECCCHHHHHHHHHHHHHHHC-CC---EEEEEEC--HHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCCC------
Q ss_conf 887917899999999998732-87---0489618--89999998731578655100880079863300047660------
Q gi|254781054|r 25 GMGTGSTAKEFMILLADKIAN-GF---RVQVIPS--SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRL------ 92 (231)
Q Consensus 25 GlGtGSTv~~~i~~L~~~~~~-~~---~i~~v~t--S~~t~~~a~~~gi~~~~l~~~~~iDi~iDGaDevd~~l------ 92 (231)
|+........+.+.|++.+++ +. -+.++++ -.....++..+|+|........+-....-..+..-+..
T Consensus 10 ~~~~~~~~~~~~~~la~~i~~~~~~~dviig~~~gg~~~a~~la~~L~~p~~~~rk~~~~~~~~~~~~~~~~g~~VlivD 89 (154)
T 2yzk_A 10 GLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAXLALRLSKPLGYVRPERKGHGTLSQVEGDPPKGRVVVVD 89 (154)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTSCCCCCCBTCCCSSEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 93898999999999998754234467656652454675014555545543121100135431244223555785699986
Q ss_pred EEEECCCH-HHHHHHHHHHHHCCEEEEEEHHHCC---CCCCCCCCCEEEE
Q ss_conf 58831657-7777879986102269996230351---3455788726787
Q gi|254781054|r 93 RLIKGYGG-ALLREKIIAHAASRFIVIGDESKRV---DFLGRGMLPIEID 138 (231)
Q Consensus 93 ~lIKGgGg-Al~rEKiva~~a~~~I~i~D~sK~v---~~Lg~~plPVEV~ 138 (231)
++|=.|+- .-..|.+-...++...+.+=..|.- +.+-...+|++++
T Consensus 90 Dii~tG~T~~~~~~~l~~~ga~~v~~~vl~~~~~~~~~~l~~~~v~~~~~ 139 (154)
T 2yzk_A 90 DVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARXGVRLVSV 139 (154)
T ss_dssp EEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEEEE
T ss_pred HHHHCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHCCCCEEEE
T ss_conf 02103657789999998789979999999988766689999769989997
No 125
>>2o4u_X Dimeric dihydrodiol dehydrogenase; NADP-binding rossmann-fold domain, predominantly anti- parallel beta sheet, oxidoreductase; 2.00A {Macaca fascicularis} PDB: 2o48_X 2poq_X* (X:1-127,X:278-334)
Probab=21.43 E-value=56 Score=14.02 Aligned_cols=62 Identities=21% Similarity=0.363 Sum_probs=37.7
Q ss_pred EEE-ECCCHHHHHHHHHHHHHHHCCCEEEEEEC--HHHHHHHHHHCCCCC--CCCCC---CCEEEEEECC
Q ss_conf 998-87917899999999998732870489618--899999987315786--55100---8800798633
Q gi|254781054|r 23 TLG-MGTGSTAKEFMILLADKIANGFRVQVIPS--SRNTENFCKIHHIPL--HSPED---VSSVDLSIDG 84 (231)
Q Consensus 23 viG-lGtGSTv~~~i~~L~~~~~~~~~i~~v~t--S~~t~~~a~~~gi~~--~~l~~---~~~iDi~iDG 84 (231)
.+| +|+|.-...|...|.........+..|.+ .......+.++|+|- .++++ .+.+|+.+=.
T Consensus 4 r~gIIG~G~ia~~~~~~l~~~~~~~~~ivaV~~r~~~~a~~fa~~~~~~~~~~s~eell~d~~vD~V~Ia 73 (184)
T 2o4u_X 4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVG 73 (184)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHTCTTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCHHHHHCCCCCCEEECC
T ss_conf 8999888799999999998586888599999879999999999983998143899999659897822202
No 126
>>3e4r_A Nitrate transport protein; ALFA-beta protein, substrate-binding protein domain, alkanesulfonate-binding protein; HET: EPE; 2.01A {Xanthomonas axonopodis PV} (A:110-207)
Probab=21.06 E-value=57 Score=13.97 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=27.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHHH-CCCEEEE-EECHHHHHHHHHH
Q ss_conf 9789988791789999999999873-2870489-6188999999873
Q gi|254781054|r 20 DGMTLGMGTGSTAKEFMILLADKIA-NGFRVQV-IPSSRNTENFCKI 64 (231)
Q Consensus 20 ~gmviGlGtGSTv~~~i~~L~~~~~-~~~~i~~-v~tS~~t~~~a~~ 64 (231)
.|..||.+.|||..+++++..+... ....... +.+...+...+..
T Consensus 21 ~Gk~vgv~~gs~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~al~~ 67 (98)
T 3e4r_A 21 KGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPLYLSPANARAAFAA 67 (98)
T ss_dssp TTCEEEECTTSHHHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 58721013332037777768998402544432101582577788861
No 127
>>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis W83} (A:1-126,A:258-289)
Probab=20.76 E-value=58 Score=13.93 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=40.7
Q ss_pred CEEE-ECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCC-CCCCCEEEEEECC
Q ss_conf 8998-8791789999999999873287048961889999998731578655-1008800798633
Q gi|254781054|r 22 MTLG-MGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHS-PEDVSSVDLSIDG 84 (231)
Q Consensus 22 mviG-lGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~-l~~~~~iDi~iDG 84 (231)
+.|| +|+|+-...+++.|.+. .+..+..+..+..........+++..+ ....+.+|+.+.-
T Consensus 10 irVgIIG~G~~g~~~l~~l~~~--~~~eivav~d~~~~~~~~~~~~~~~~~~~~~~~~~D~V~I~ 72 (158)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA--PDFEIAGIVRRNPAEVPFELQPFRVVSDIEQLESVDVALVC 72 (158)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC-------CCTTSCEESSGGGSSSCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHCC--CCCEEEEEECCCHHHHHHHHCCCCCHHHHHHCCCCCCEEEC
T ss_conf 5699989889999999999649--99389999898989956541588866689972589826981
No 128
>>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genomics, PSI-2, protein structure initiative; 1.85A {Chlorobaculum tepidum} (A:)
Probab=20.66 E-value=59 Score=13.92 Aligned_cols=101 Identities=11% Similarity=0.004 Sum_probs=47.5
Q ss_pred CCCCCE--EEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCCCEEE
Q ss_conf 899789--988791789999999999873287048961889999998731578655100880079863300047660588
Q gi|254781054|r 18 VVDGMT--LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLI 95 (231)
Q Consensus 18 v~~gmv--iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi~iDGaDevd~~l~lI 95 (231)
-+.||+ ||+|.|.--..-++.+ +.-...++.+.+.+.....+.....++...... ..-.
T Consensus 3 ~~~G~l~~VG~GpG~~~~lT~~a~--~~l~~ad~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~------------ 63 (117)
T 3hh1_A 3 AHKGTLYVVATPLGNLDDXTFRAV--NTLRNAGAIACEDTRRTSILLKHFGIEGKRLVS-----YHSF------------ 63 (117)
T ss_dssp CCCCCEEEEEECSSCGGGSCHHHH--HHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEE-----CCST------------
T ss_pred CCCCEEEEECCCCCCHHHHCHHHH--HHHHHCCEEEECCCHHHHHHHHHHCCCCCEEEE-----CCCC------------
T ss_conf 878689998168988334179999--999869999984721468889874433444775-----1551------------
Q ss_pred ECCCHHHHHHHHHH--HHHCCEEEEEE---------HHHCCCCCCCCCCCEEEEEC
Q ss_conf 31657777787998--61022699962---------30351345578872678725
Q gi|254781054|r 96 KGYGGALLREKIIA--HAASRFIVIGD---------ESKRVDFLGRGMLPIEIDQF 140 (231)
Q Consensus 96 KGgGgAl~rEKiva--~~a~~~I~i~D---------~sK~v~~Lg~~plPVEV~p~ 140 (231)
.....-+.+++ ...++.+++.+ .+.+++.+-..-+++||+|-
T Consensus 64 ---~~~~~~~~~~~~~~~g~~vv~~~~~GDp~~y~~~~~l~~~~~~~~i~vevIPG 116 (117)
T 3hh1_A 64 ---NEERAVRQVIELLEEGSDVALVTDAGTPAISDPGYTXASAAHAAGLPVVPVPG 116 (117)
T ss_dssp ---THHHHHHHHHHHHHTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC-
T ss_pred ---HHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHHCCCCEEECCC
T ss_conf ---57889999999998499599990699964657789999999986996895799
No 129
>>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi} (A:1-101)
Probab=20.51 E-value=59 Score=13.90 Aligned_cols=63 Identities=16% Similarity=0.278 Sum_probs=41.8
Q ss_pred EEEECCCHHHHHHHHHHHHHHHCC-CEEEEEECHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCHHCC
Q ss_conf 998879178999999999987328-70489618899999987315786--5510088007986330004
Q gi|254781054|r 23 TLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFCKIHHIPL--HSPEDVSSVDLSIDGFDEI 88 (231)
Q Consensus 23 viGlGtGSTv~~~i~~L~~~~~~~-~~i~~v~tS~~t~~~a~~~gi~~--~~l~~~~~iDi~iDGaDev 88 (231)
++=+|.|..-..+++.|.+ .+ ..+.++..+..........++.. .++.+.+.+.=++.|+|-|
T Consensus 8 ilI~GaG~iG~~l~~~l~~---~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~d~V 73 (101)
T 3ic5_A 8 ICVVGAGKIGQXIAALLKT---SSNYSVTVADHDLAALAVLNRXGVATKQVDAKDEAGLAKALGGFDAV 73 (101)
T ss_dssp EEEECCSHHHHHHHHHHHH---CSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred EEEECCCHHHHHHHHHHHH---CCCCCEEEEECCHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCEE
T ss_conf 8998669999999999985---89987787506688876410222213540332346899996699999
No 130
>>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* (A:139-309)
Probab=20.43 E-value=59 Score=13.89 Aligned_cols=63 Identities=16% Similarity=0.146 Sum_probs=40.7
Q ss_pred HHHHHHHH--HCCCCCEEE-ECCCHHHHHHHHHHHHHHHCC-CEEEEEECHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999998--389978998-879178999999999987328-7048961889999998731578655100
Q gi|254781054|r 9 NAARRAIQ--YVVDGMTLG-MGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFCKIHHIPLHSPED 74 (231)
Q Consensus 9 ~~a~~A~~--~v~~gmviG-lGtGSTv~~~i~~L~~~~~~~-~~i~~v~tS~~t~~~a~~~gi~~~~l~~ 74 (231)
..|..|++ .+++|..|- .|.|....++++.+.. .| ..+.++.++.....+++..|-......+
T Consensus 13 ~ta~~~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~---~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (171)
T 2dq4_A 13 GNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRA---SGAGPILVSDPNPYRLAFARPYADRLVNPLE 79 (171)
T ss_dssp HHHHHHHHSTTCCTTSCEEEECCSHHHHHHHHHHHH---TTCCSEEEECSCHHHHGGGTTTCSEEECTTT
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHH---CCCCEEEECCCCCCEEEEEEECCCCCCCCCC
T ss_conf 457789986078996999999568511799999997---3993796445443000110002441134444
Done!