HHsearch results for GI: 254781054 and protein with PDBid: 1o8b_A

>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein structure initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=100.00  E-value=0  Score=527.72  Aligned_cols=218  Identities=38%  Similarity=0.536  Sum_probs=206.0

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf             98789999999999983899789988791789999999999873287048961889999998731578655100880079
Q gi|254781054|r    1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL   80 (231)
Q Consensus         1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi   80 (231)
                      |||+++|+++|++|++||++||+||||||||+.+||++|+++.  +..+.+||||.+|+++|+++|||+.++++++++|+
T Consensus         1 M~~~~~K~~~a~~A~~~i~~gmviGLGtGsTv~~~i~~L~~~~--~~~~~~v~ss~~t~~~a~~~Gi~l~~~~~~~~iDi   78 (219)
T 1o8b_A            1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMK--GQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGI   78 (219)
T ss_dssp             ----------------------CEEECCSCC-----------------CCEEESCCC------------CCGGGCSCEEE
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHCCCCCCHHHCCCCCE
T ss_conf             9989999999999997479999998686699999999998622--77607875858999999871666568656787676


Q ss_pred             EECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf             86330004766058831657777787998610226999623035134557887267872575899999986322148985
Q gi|254781054|r   81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE  160 (231)
Q Consensus        81 ~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~  160 (231)
                      |||||||||+++|+||||||||+|||++|++|++||+|+|+||+|++||+|||||||+|++|.++.+.|++    +|+.+
T Consensus        79 aiDGaDevd~~l~liKGgGgal~rEKiva~~a~~~iiI~D~sK~v~~Lg~~plPVEV~p~~~~~v~~~l~~----lg~~~  154 (219)
T 1o8b_A           79 YVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVK----LGGRP  154 (219)
T ss_dssp             EEECCSEECTTSCEECCCCC-HHHHHHHHHHEEEEEEEEEGGGBCSSBTSSCEEEEECGGGHHHHHHHHHH----TTCEE
T ss_pred             EEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEECHHHHHHHHHHHHH----HCCCC
T ss_conf             75173021022435642689999888999835256999742134302699856689637789999999998----27984


Q ss_pred             EEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEECCC-CCEEEEECCCCEEEEEEC
Q ss_conf             03772258863625788889982079868989999996279968664802476-778999779984999879
Q gi|254781054|r  161 ELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK  231 (231)
Q Consensus       161 ~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~~~-~d~viv~~~dG~~~vl~k  231 (231)
                      .+|      +||+|||||||+||+|.++.||.+++.+|++||||||||||.++ ++.+++|+++| +++++|
T Consensus       155 ~~r------~p~vTdnGN~IlD~~~~~i~dp~~l~~~L~~ipGVVe~GlF~~~~~~~~ii~~~~G-v~~i~k  219 (219)
T 1o8b_A          155 EYR------QGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDG-VKTIVK  219 (219)
T ss_dssp             EEC------TTCCCTTSCEEEEEESCCBSCHHHHHHHHHTSTTEEEESEECSSCCSEEEEEETTE-EEEEC-
T ss_pred             CCC------CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCE-EEEEEC
T ss_conf             357------88575899889981289879999999998379989821702798689999980994-799829