HHsearch results for GI: 254781054 and protein with PDBid: 1o8b_A
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein structure initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=100.00 E-value=0 Score=527.72 Aligned_cols=218 Identities=38% Similarity=0.536 Sum_probs=206.0
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 98789999999999983899789988791789999999999873287048961889999998731578655100880079
Q gi|254781054|r 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL 80 (231)
Q Consensus 1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi 80 (231)
|||+++|+++|++|++||++||+||||||||+.+||++|+++. +..+.+||||.+|+++|+++|||+.++++++++|+
T Consensus 1 M~~~~~K~~~a~~A~~~i~~gmviGLGtGsTv~~~i~~L~~~~--~~~~~~v~ss~~t~~~a~~~Gi~l~~~~~~~~iDi 78 (219)
T 1o8b_A 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMK--GQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGI 78 (219)
T ss_dssp ----------------------CEEECCSCC-----------------CCEEESCCC------------CCGGGCSCEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHCCCCCCHHHCCCCCE
T ss_conf 9989999999999997479999998686699999999998622--77607875858999999871666568656787676
Q ss_pred EECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf 86330004766058831657777787998610226999623035134557887267872575899999986322148985
Q gi|254781054|r 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE 160 (231)
Q Consensus 81 ~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~ 160 (231)
|||||||||+++|+||||||||+|||++|++|++||+|+|+||+|++||+|||||||+|++|.++.+.|++ +|+.+
T Consensus 79 aiDGaDevd~~l~liKGgGgal~rEKiva~~a~~~iiI~D~sK~v~~Lg~~plPVEV~p~~~~~v~~~l~~----lg~~~ 154 (219)
T 1o8b_A 79 YVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVK----LGGRP 154 (219)
T ss_dssp EEECCSEECTTSCEECCCCC-HHHHHHHHHHEEEEEEEEEGGGBCSSBTSSCEEEEECGGGHHHHHHHHHH----TTCEE
T ss_pred EEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEECHHHHHHHHHHHHH----HCCCC
T ss_conf 75173021022435642689999888999835256999742134302699856689637789999999998----27984
Q ss_pred EEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECCEECCC-CCEEEEECCCCEEEEEEC
Q ss_conf 03772258863625788889982079868989999996279968664802476-778999779984999879
Q gi|254781054|r 161 ELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231 (231)
Q Consensus 161 ~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~GlF~~~-~d~viv~~~dG~~~vl~k 231 (231)
.+| +||+|||||||+||+|.++.||.+++.+|++||||||||||.++ ++.+++|+++| +++++|
T Consensus 155 ~~r------~p~vTdnGN~IlD~~~~~i~dp~~l~~~L~~ipGVVe~GlF~~~~~~~~ii~~~~G-v~~i~k 219 (219)
T 1o8b_A 155 EYR------QGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDG-VKTIVK 219 (219)
T ss_dssp EEC------TTCCCTTSCEEEEEESCCBSCHHHHHHHHHTSTTEEEESEECSSCCSEEEEEETTE-EEEEC-
T ss_pred CCC------CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCE-EEEEEC
T ss_conf 357------88575899889981289879999999998379989821702798689999980994-799829