HHsearch results for GI: 254781054 and protein with PDBid: 1vb5_A
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.124.1.5
Probab=97.32 E-value=0.0069 Score=37.38 Aligned_cols=121 Identities=23% Similarity=0.207 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHCCCCCE-EEECCCHHHHHHHHHHHHHHHCCCEEEEEE--C-----HHHHHHHHHHCCCCCCCCCCC
Q ss_conf 89999999999983899789-988791789999999999873287048961--8-----899999987315786551008
Q gi|254781054|r 4 LQMKRNAARRAIQYVVDGMT-LGMGTGSTAKEFMILLADKIANGFRVQVIP--S-----SRNTENFCKIHHIPLHSPEDV 75 (231)
Q Consensus 4 ~~~K~~~a~~A~~~v~~gmv-iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~--t-----S~~t~~~a~~~gi~~~~l~~~ 75 (231)
.+..+.+|..+.++|++|++ +=.+-.+|+..++....++ +.+.+++. | +.+.+..+.+.|||+.-..+.
T Consensus 93 ~~a~~~ia~~~~~~i~dg~~IlT~~~S~tv~~~l~~a~~~---g~~~~V~v~EsrP~~~G~~lA~eL~~~Gi~vtlI~D~ 169 (276)
T 1vb5_A 93 EEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKER---KKRFKVILTESSPDYEGLHLARELEFSGIEFEVITDA 169 (276)
T ss_dssp HHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHT---TCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGG
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHC---CCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECHH
T ss_conf 9999999999887758999899979808999999999987---9957999944897754099999998759980896478
Q ss_pred ------CEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHHH-HHCCEEEEEEHHHCCCCCC
Q ss_conf ------80079863300047660588316577777879986-1022699962303513455
Q gi|254781054|r 76 ------SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH-AASRFIVIGDESKRVDFLG 129 (231)
Q Consensus 76 ------~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva~-~a~~~I~i~D~sK~v~~Lg 129 (231)
.+.|+.+=|||-|..|+..+---|-..+- ++|. ...-|+++++.+|+.+..-
T Consensus 170 a~~~~m~~~d~VlvGAd~i~~nG~v~nkiGT~~lA--~~Ak~~~iPvyV~a~~~K~~~~~~ 228 (276)
T 1vb5_A 170 QMGLFCREASIAIVGADMITKDGYVVNKAGTYLLA--LACHENAIPFYVAAETYKFHPTLK 228 (276)
T ss_dssp GHHHHHTTCSEEEECCSEECTTSCEEEETTHHHHH--HHHHHTTCCEEEECCGGGBCSSCC
T ss_pred HHHHHHHHCCEEEEEEEEEECCCCEEEHHHHHHHH--HHHHHCCCCEEEECCCCCCCCCCC
T ss_conf 99998530787998524895489886523079999--999856998699703455577778