HHsearch results for GI: 254781054 and protein with PDBid: 3kv1_A
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.70A {Vibrio fischeri ES114}
Probab=95.33 E-value=0.017 Score=35.03 Aligned_cols=67 Identities=9% Similarity=0.091 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHH----HCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEC-------------HHHHHHHHHHC
Q ss_conf 78999999999998----38997899887917899999999998732870489618-------------89999998731
Q gi|254781054|r 3 ALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS-------------SRNTENFCKIH 65 (231)
Q Consensus 3 ~~~~K~~~a~~A~~----~v~~gmviGlGtGSTv~~~i~~L~~~~~~~~~i~~v~t-------------S~~t~~~a~~~ 65 (231)
.++..+.+|+.|++ .++++++||+|.|+|+..+++.+... ...++++||. ..-++..|+++
T Consensus 34 ~~~~~~~v~~~aA~~l~~~l~~~~~iGv~wG~Tl~~~~~~l~~~--~~~~~~vv~l~Gg~~~~~~~~~~~~i~~~lA~~~ 111 (267)
T 3kv1_A 34 TNEQRKQVAALVSSYLNNNLQEGMAVAVGQGQNVAAVADHAGIV--TQRNARFVSAIGGTHRSGDIINADHICRRLAKKY 111 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHCCCCC--CCCCCEEEESBCBCC----CCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCC--CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 36999999999999999757689889994788999999835766--7789569946887677767568999999999982
Q ss_pred CCCCCC
Q ss_conf 578655
Q gi|254781054|r 66 HIPLHS 71 (231)
Q Consensus 66 gi~~~~ 71 (231)
|=+...
T Consensus 112 gg~~~~ 117 (267)
T 3kv1_A 112 GGSSET 117 (267)
T ss_dssp TCEEEC
T ss_pred CCEEEE
T ss_conf 998999