HHSEARCH alignment of GI: 254781054 and SCOP domain: d1lk5a1

Alignment

Probab=99.96  E-value=1.3e-29  Score=201.90  Aligned_cols=145  Identities=39%  Similarity=0.630  Sum_probs=133.9

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCC--CEEEEEECHHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf             9878999999999998389978998879178999999999987328--70489618899999987315786551008800
Q gi|254781054|r    1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV   78 (231)
Q Consensus         1 M~~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~--~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~i   78 (231)
                      ||++|+|+.+|++|+++|+|||+|+||+|||+.+++++|.++....  .++..++++......+...|....++.+..++
T Consensus         1 mn~~E~K~~IA~~Aa~lI~dg~~I~ldsGTT~~~la~~L~~~~~~~v~t~~~~i~~~~~~~~~~~~~G~~~~~~~~~~~~   80 (149)
T d1lk5a1           1 MNVEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAI   80 (149)
T ss_dssp             CCHHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHHHTTCCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHCCCCCCCHHHCCCC
T ss_conf             98799999999999976899999998886089999999977533553234143202036678888628522302104642


Q ss_pred             EEEECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCEEEEECCHHHHHHHH
Q ss_conf             79863300047660588316577777879986102269996230351345578872678725758999999
Q gi|254781054|r   79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSAL  149 (231)
Q Consensus        79 Di~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg~~plPVEV~p~~~~~v~~~l  149 (231)
                      |++|||||.+|+++.+.+++++.+..+|.++++|+++|+++|+||+|.+|+    ||||+|.+|..+.+.|
T Consensus        81 d~~f~g~~~id~~~g~~~~~~~~~~~kk~m~~~A~~~illaDsSK~v~~L~----~iev~~~~~~~~~~~i  147 (149)
T d1lk5a1          81 DVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLD----IADIVIVGTREGVKKL  147 (149)
T ss_dssp             EEEEECCSEECTTCCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSTS----CCCEEEEEETTEEEEE
T ss_pred             CEEEEECCEECCCCCEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC----CCCCCEEEHHHHHHHH
T ss_conf             389975777768673247979999998999986095999996871306679----9578810159999972

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: D-ribose-5-phosphate isomerase (RpiA), catalytic domain
domain: D-ribose-5-phosphate isomerase (RpiA), catalytic domain
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]