HHSEARCH alignment of GI: 254781054 and SCOP domain: d1lk5a2

Alignment

Probab=99.93  E-value=4.3e-27  Score=186.35  Aligned_cols=79  Identities=38%  Similarity=0.579  Sum_probs=75.0

Q ss_pred             CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEECC
Q ss_conf             57887267872575899999986322148985037722588636257888899820798689899999962799686648
Q gi|254781054|r  129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHG  208 (231)
Q Consensus       129 g~~plPVEV~p~~~~~v~~~l~~~~~~~G~~~~lR~~~~~~gp~iTDnGN~IlD~~~~~i~dp~~le~~L~~IpGVVe~G  208 (231)
                      -+|||||||+||+|.++.+.|++    +|+++++|++.+++|||+|||||||+|++|+++.||.+++.+|++||||||||
T Consensus         2 ~KfPlPVEV~p~~~~~v~~~l~~----~g~~~~lR~~~~~~gp~iTDnGN~I~D~~~~~i~~p~~l~~~L~~ipGVVe~G   77 (80)
T d1lk5a2           2 QKMPVPIEVIPQAWKAIIEELSI----FNAKAELRMGVNKDGPVITDNGNFIIDAKFPRIDDPLDMEIELNTIPGVIENG   77 (80)
T ss_dssp             SSCCEEEEECGGGHHHHHHHGGG----GTCEEEECBCSSSSSBCCCTTSCEEEEEECSCCSCHHHHHHHHHTSTTEEEES
T ss_pred             CCCCCCEEECHHHHHHHHHHHHH----CCCCCEEECCCCCCCCEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEC
T ss_conf             85875789857289999999998----09983172046788876825999798788898899999999997899989517


Q ss_pred             EEC
Q ss_conf             024
Q gi|254781054|r  209 LFI  211 (231)
Q Consensus       209 lF~  211 (231)
                      ||.
T Consensus        78 LFa   80 (80)
T d1lk5a2          78 IFA   80 (80)
T ss_dssp             EEC
T ss_pred             CCC
T ss_conf             469

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: D-ribose-5-phosphate isomerase (RpiA), lid domain
family: D-ribose-5-phosphate isomerase (RpiA), lid domain
domain: D-ribose-5-phosphate isomerase (RpiA), lid domain
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]