HHSEARCH alignment of GI: 254781054 and SCOP domain: d1uj4a1

Alignment
>d1uj4a1 c.124.1.4 (A:3-131,A:206-227) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=99.97  E-value=3.5e-30  Score=205.56  Aligned_cols=142  Identities=46%  Similarity=0.650  Sum_probs=127.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCC--CEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf             78999999999998389978998879178999999999987328--7048961889999998731578655100880079
Q gi|254781054|r    3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL   80 (231)
Q Consensus         3 ~~~~K~~~a~~A~~~v~~gmviGlGtGSTv~~~i~~L~~~~~~~--~~i~~v~tS~~t~~~a~~~gi~~~~l~~~~~iDi   80 (231)
                      .+..|+.+|++|++||+|||+|+||+|||+.+++++|+++....  .++..++++......+...++....+.+ -++|+
T Consensus         3 ~~~~K~~IA~~A~~~I~dg~~I~LdsGTT~~~la~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~l~~-~~~D~   81 (151)
T d1uj4a1           3 LESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPP-EGVDL   81 (151)
T ss_dssp             THHHHHHHHHHHHTTCCTTCEEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHHHTTCCBCCCCT-TCEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCC-CEECE
T ss_conf             79999999999997689999999896189999999998877540442134214326589998627742212234-30058


Q ss_pred             EECCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCC---CCCCCEEEEECCHHHH
Q ss_conf             8633000476605883165777778799861022699962303513455---7887267872575899
Q gi|254781054|r   81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG---RGMLPIEIDQFGVNKT  145 (231)
Q Consensus        81 ~iDGaDevd~~l~lIKGgGgAl~rEKiva~~a~~~I~i~D~sK~v~~Lg---~~plPVEV~p~~~~~v  145 (231)
                      +|+|||.+|+++++.+++++.+..||.++.+|+++|+++|+||+|++|+   .+|+||||+|+|++.+
T Consensus        82 aF~g~~gvd~~~g~~~~~~~e~~~kk~~~~~A~~~ilLaD~SKlv~~L~~~~~~p~piev~p~~~~~v  149 (151)
T d1uj4a1          82 AIDGADEIAPGLALIKGMGGALLREKIVERVAKEFIVIADHTKKVPVLLFVGMATRALVAGPFGVEEL  149 (151)
T ss_dssp             EEECCSEEEGGGEEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSSEECSCCSEEEEEETTEEEEE
T ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCEECCCCCCCCCCEEEEECCCHHHHC
T ss_conf             99716612577671038889998877898736849999978840220244899977699835657413


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: D-ribose-5-phosphate isomerase (RpiA), catalytic domain
domain: D-ribose-5-phosphate isomerase (RpiA), catalytic domain
species: Thermus thermophilus [TaxId: 274]