HHSEARCH alignment of GI: 254781054 and SCOP domain: d1vb5a_

Alignment
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.31  E-value=0.0044  Score=37.15  Aligned_cols=130  Identities=21%  Similarity=0.194  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHCCCCCE-EEECCCHHHHHHHHHHHHHHHCCCEEEEEEC-----HHHHHHHHHHCCCCCCCCCCC--
Q ss_conf             89999999999983899789-9887917899999999998732870489618-----899999987315786551008--
Q gi|254781054|r    4 LQMKRNAARRAIQYVVDGMT-LGMGTGSTAKEFMILLADKIANGFRVQVIPS-----SRNTENFCKIHHIPLHSPEDV--   75 (231)
Q Consensus         4 ~~~K~~~a~~A~~~v~~gmv-iGlGtGSTv~~~i~~L~~~~~~~~~i~~v~t-----S~~t~~~a~~~gi~~~~l~~~--   75 (231)
                      ++..+..++.+.++|++|++ +=.|--+||..++....++. ..+++.+.-|     +.+....+.+.|||+.-..+.  
T Consensus        92 ~~a~~~i~~~~~~~i~~g~~ILT~~~S~tv~~~l~~a~~~g-k~~~V~v~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa~  170 (274)
T d1vb5a_          92 EEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERK-KRFKVILTESSPDYEGLHLARELEFSGIEFEVITDAQM  170 (274)
T ss_dssp             HHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTT-CCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGH
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCC-CCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHH
T ss_conf             99999999986776599988998184389999999999869-97289996787655509999999874995178440489


Q ss_pred             ----CEEEEEECCHHCCCCCCEEEECCCHHHHHHHHHH-HHHCCEEEEEEHHHCCCCCCCCCCCEE
Q ss_conf             ----8007986330004766058831657777787998-610226999623035134557887267
Q gi|254781054|r   76 ----SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA-HAASRFIVIGDESKRVDFLGRGMLPIE  136 (231)
Q Consensus        76 ----~~iDi~iDGaDevd~~l~lIKGgGgAl~rEKiva-~~a~~~I~i~D~sK~v~~Lg~~plPVE  136 (231)
                          .+.|+.+=|||-|..|+..+---|-..+-  ++| ....-|+++++.+|+.+.+-...+|+|
T Consensus       171 ~~~m~~~d~VivGAd~v~~nG~v~nkiGT~~~A--~~Ak~~~vP~~V~a~~~k~~~~~~~~~~~~~  234 (274)
T d1vb5a_         171 GLFCREASIAIVGADMITKDGYVVNKAGTYLLA--LACHENAIPFYVAAETYKFHPTLKSGDVMLM  234 (274)
T ss_dssp             HHHHTTCSEEEECCSEECTTSCEEEETTHHHHH--HHHHHTTCCEEEECCGGGBCSSCCGGGCCCC
T ss_pred             HHHHHCCCEEEEEEEEEECCCCEEECCCHHHHH--HHHHHCCCCCEEECCCCCCCCCCCCCCCCEE
T ss_conf             999640887999545995389877545055899--9999749985473144566777789980403


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: IF2B-like
domain: Putative eIF-2B subunit 2-like protein PH0440
species: Pyrococcus horikoshii [TaxId: 53953]