BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781054|ref|YP_003065467.1| ribose-5-phosphate isomerase A
[Candidatus Liberibacter asiaticus str. psy62]
(231 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781054|ref|YP_003065467.1| ribose-5-phosphate isomerase A [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040731|gb|ACT57527.1| ribose-5-phosphate isomerase A [Candidatus Liberibacter asiaticus
str. psy62]
Length = 231
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN
Sbjct: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD
Sbjct: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI
Sbjct: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK
Sbjct: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
>gi|49474277|ref|YP_032319.1| ribose-5-phosphate isomerase A [Bartonella quintana str. Toulouse]
gi|67461403|sp|Q6FZP1|RPIA_BARQU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|49239781|emb|CAF26171.1| Ribose 5-phosphate isomerase [Bartonella quintana str. Toulouse]
Length = 234
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 104/230 (45%), Positives = 153/230 (66%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ Q+K+ AA +A+++V D M LG+GTGSTA EF+ LL +++A+G RV + +S+ +E
Sbjct: 1 MNVQQLKKRAAAKALEFVQDDMRLGIGTGSTANEFIRLLGERVADGLRVTGVATSQYSEQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ +P+ + E + +DL IDG DEI + LIKG GGAL REKI+A A+ +VI D
Sbjct: 61 LCRKFGVPVTTLEQMPELDLDIDGADEIGPEMTLIKGGGGALWREKIVAAASRAMLVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG LPIE++ FG+ T +++VA GL+ E+ LR NG F +DGG++I
Sbjct: 121 ETKVVKTLGAFALPIEVNPFGMPATRRLIEKVADDLGLSGEIILRMNGENPFKTDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
DAF+G I P+++S L IPGV+EHGLF + AI+ +DG+ VL+
Sbjct: 181 FDAFWGCILQPRLLSEALLAIPGVVEHGLFWGLASRAIVAMADGQIKVLE 230
>gi|163868121|ref|YP_001609325.1| ribose-5-phosphate isomerase A [Bartonella tribocorum CIP 105476]
gi|161017772|emb|CAK01330.1| Ribose 5-phosphate isomerase [Bartonella tribocorum CIP 105476]
Length = 234
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 105/230 (45%), Positives = 155/230 (67%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD Q+K+ AA +A++++ D M LG+G+GST EF+ LL +++A+G RV + +SR +E
Sbjct: 1 MDVQQLKKRAAVKALEFIEDDMLLGIGSGSTVNEFIRLLGERVADGLRVTGVATSRYSEQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +P+ + E + +DL IDG DEI + LIKG GGALL EKI+A A+ ++I D
Sbjct: 61 LCHKFGVPVSTLEQIPELDLDIDGADEIGPEMMLIKGGGGALLYEKIVASASRAMLIIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG LPIE++ FGV+ T A+++VA GL+ E+ LR NG F +DGG++I
Sbjct: 121 ETKMVKKLGAFALPIEVNPFGVHTTRKAIEKVADDLGLSGEIVLRMNGKNPFKTDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+DAF+G I P+++S L IPGV+EHGLF+ M AI+ +DG+ VL+
Sbjct: 181 LDAFWGCILQPKLLSDALLVIPGVVEHGLFLGMASRAIVAMADGQIKVLE 230
>gi|238538032|pdb|3HHE|A Chain A, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Bartonella Henselae
gi|238538033|pdb|3HHE|B Chain B, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Bartonella Henselae
Length = 255
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 151/230 (65%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ Q+K+ AA +A+++V D M LG+G+GST EF+ LL +++ANG RV + +S+ +E
Sbjct: 22 MNVQQLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANGLRVTCVATSQYSEQ 81
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +P+ + E + +DL IDG DEI + LIKG GGALL EKI+A A+ VI D
Sbjct: 82 LCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIAD 141
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG LPIE++ FG++ T A+++ A GL+ E+ LR NG F +DGG++I
Sbjct: 142 ETKMVKTLGAFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFI 201
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
DAF+G I P+++S L IPGV+EHGLF+ + AI+ +D + VL+
Sbjct: 202 FDAFWGRILQPKLLSEALLAIPGVVEHGLFLGLASRAIVAMADSQIKVLE 251
>gi|240850324|ref|YP_002971717.1| ribose 5-phosphate isomerase A [Bartonella grahamii as4aup]
gi|240267447|gb|ACS51035.1| ribose 5-phosphate isomerase A [Bartonella grahamii as4aup]
Length = 234
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 154/230 (66%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD Q+K+ AA +A++++ D M LG+G+GST EF+ LL +++++G RV + +SR +E
Sbjct: 1 MDVQQLKKMAAIKALEFIEDDMRLGIGSGSTVNEFIRLLGERVSDGLRVTGVATSRYSEQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ +P+ + E + +DL IDG DEI + LIKG GGALL EKI+A A+ +VI D
Sbjct: 61 LCRKFGVPVSTLEQIPELDLDIDGADEIGPEMMLIKGGGGALLYEKIVASASRAMLVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG LPIE++ FG++ T A+++VA GL+ E+ LR NG F +DGG++I
Sbjct: 121 ETKVVKRLGAFALPIEVNPFGIHTTRRAIEKVADDLGLSGEIVLRMNGKNPFETDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+DAF+G I P+ +S L IPGV+EHGLF+ + AI+ DG+ +L+
Sbjct: 181 LDAFWGCILQPKPLSDALLAIPGVVEHGLFLGLASRAIVAMVDGQTKILE 230
>gi|49475429|ref|YP_033470.1| ribose-5-phosphate isomerase A [Bartonella henselae str. Houston-1]
gi|67461405|sp|Q6G3V6|RPIA_BARHE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|49238235|emb|CAF27445.1| Ribose 5-phosphate isomerase [Bartonella henselae str. Houston-1]
Length = 234
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 151/230 (65%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ Q+K+ AA +A+++V D M LG+G+GST EF+ LL +++ANG RV + +S+ +E
Sbjct: 1 MNVQQLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANGLRVTCVATSQYSEQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +P+ + E + +DL IDG DEI + LIKG GGALL EKI+A A+ VI D
Sbjct: 61 LCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG LPIE++ FG++ T A+++ A GL+ E+ LR NG F +DGG++I
Sbjct: 121 ETKMVKTLGAFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
DAF+G I P+++S L IPGV+EHGLF+ + AI+ +D + VL+
Sbjct: 181 FDAFWGRILQPKLLSEALLAIPGVVEHGLFLGLASRAIVAMADSQIKVLE 230
>gi|218462659|ref|ZP_03502750.1| ribose-5-phosphate isomerase A [Rhizobium etli Kim 5]
Length = 232
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 123/228 (53%), Positives = 165/228 (72%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V DGM LG+GTGSTA+EF+ LLA+K+A+GFRV+ +P+S T
Sbjct: 1 MDAREMKIKAAEAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVASGFRVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL++DG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPALDLTVDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G F +DGG++I
Sbjct: 121 ESKLVDTLGAYALPIEVNPFGLVSTRMAIEKVAARLGLSGELSLRQSGDGEFTTDGGHHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 181 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 228
>gi|327190617|gb|EGE57705.1| ribose 5-phosphate isomerase protein [Rhizobium etli CNPAF512]
Length = 466
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 123/228 (53%), Positives = 164/228 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V DGM LG+GTGSTA+EF+ LLA+K+A GFRV+ +P+S T
Sbjct: 235 MDAREMKIKAAEAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVAGGFRVEGVPTSERTAR 294
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL++DG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 295 LCVELGVPLKSLDELPALDLTVDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIAD 354
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G F +DGG++I
Sbjct: 355 ESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLSGELSLRQSGDGEFTTDGGHHI 414
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 415 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 462
>gi|86357995|ref|YP_469887.1| ribose-5-phosphate isomerase A [Rhizobium etli CFN 42]
gi|123751990|sp|Q2K7M6|RPIA_RHIEC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|86282097|gb|ABC91160.1| ribose 5-phosphate isomerase protein [Rhizobium etli CFN 42]
Length = 232
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 120/228 (52%), Positives = 163/228 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V GM LG+GTGSTA+EF+ LLA+K+A GF+V+ +P+S T
Sbjct: 1 MDAREMKIKAAEAALAHVESGMRLGIGTGSTAEEFVRLLAEKVAGGFQVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL++DG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPALDLTVDGADEVDPALRLIKGGGGALLREKIVAAASQRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V+ LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G F +DGG++I
Sbjct: 121 ESKLVETLGAFALPIEVNPFGLVSTRIAIEKVAARLGLSGELNLRQSGDGEFTTDGGHHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 181 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 228
>gi|190892059|ref|YP_001978601.1| ribose 5-phosphate isomerase [Rhizobium etli CIAT 652]
gi|238692492|sp|B3PPZ4|RPIA_RHIE6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|190697338|gb|ACE91423.1| ribose 5-phosphate isomerase protein [Rhizobium etli CIAT 652]
Length = 232
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 123/228 (53%), Positives = 164/228 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V DGM LG+GTGSTA+EF+ LLA+K+A GFRV+ +P+S T
Sbjct: 1 MDAREMKIKAAEAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVAGGFRVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL++DG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPALDLTVDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G F +DGG++I
Sbjct: 121 ESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLSGELSLRQSGDGEFTTDGGHHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 181 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 228
>gi|218682852|ref|ZP_03530453.1| ribose-5-phosphate isomerase A [Rhizobium etli CIAT 894]
Length = 232
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 123/230 (53%), Positives = 164/230 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V GM LG+GTGSTA+EF+ LLA+K+A GFRV+ +P+S T
Sbjct: 1 MDAREMKIKAAEAALAHVESGMRLGIGTGSTAEEFVRLLAEKVAGGFRVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL+IDG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPALDLTIDGADEVDQALRLIKGGGGALLREKIVAAASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G F +DGG++I
Sbjct: 121 ESKLVDTLGAFALPIEVNPFGLVSTRIAIEKVAARLGLSGELGLRQSGDGEFTTDGGHHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G + +
Sbjct: 181 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTLQK 230
>gi|227822248|ref|YP_002826219.1| ribose-5-phosphate isomerase A [Sinorhizobium fredii NGR234]
gi|254808716|sp|C3MDE7|RPIA_RHISN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|227341248|gb|ACP25466.1| ribose 5-phosphate isomerase A [Sinorhizobium fredii NGR234]
Length = 231
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 119/228 (52%), Positives = 162/228 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA QMK AA+ A+ YV GM LG+GTGSTA+EF+ LLA+K+A+GF++Q +P+S T
Sbjct: 1 MDARQMKIKAAQAALGYVESGMRLGIGTGSTAEEFVRLLAEKVASGFQIQGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ +DL+IDG DE+D +LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIE++QFG+ T A+++VA+ GL ++ LR +G G F++DGG+ I
Sbjct: 121 ESKVVDVLGAFKLPIEVNQFGLTTTRLAIEKVAARLGLTGDIGLRASGDGPFMTDGGHLI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + ++ L IPGV+EHGLF+ M AII +G +
Sbjct: 181 LDASFGRIPDAEALAAGLNAIPGVVEHGLFLGMASLAIIAGPEGARTL 228
>gi|241204952|ref|YP_002976048.1| ribose-5-phosphate isomerase A [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858842|gb|ACS56509.1| ribose 5-phosphate isomerase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 232
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 123/228 (53%), Positives = 163/228 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V GM LG+GTGSTA+EF+ LLA+K+A GFRV+ +P+S T
Sbjct: 1 MDAREMKIKAAEAALAHVESGMRLGIGTGSTAEEFVRLLAEKVAGGFRVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL+IDG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPALDLTIDGADEVDQALRLIKGGGGALLREKIVAAASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G F +DGG++I
Sbjct: 121 ESKLVDTLGAFALPIEVNPFGLVSTRIAIEKVAARLGLSGELALRQSGDGEFTTDGGHHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 181 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 228
>gi|116252445|ref|YP_768283.1| ribose-5-phosphate isomerase A [Rhizobium leguminosarum bv. viciae
3841]
gi|123261533|sp|Q1MFT6|RPIA_RHIL3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|115257093|emb|CAK08187.1| putative ribose-5-phosphate isomerase A [Rhizobium leguminosarum
bv. viciae 3841]
Length = 232
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 122/228 (53%), Positives = 163/228 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V GM LG+GTGSTA+EF+ LLA+K+A GFRV+ +P+S T
Sbjct: 1 MDAREMKIKAAEAALAHVESGMRLGIGTGSTAEEFVRLLAEKVAGGFRVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL+IDG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPALDLTIDGADEVDQALRLIKGGGGALLREKIVAAASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V+ LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G F +DGG++I
Sbjct: 121 ESKLVETLGAFALPIEVNPFGLVSTRIAIEKVAARLGLSGELDLRQSGDGEFTTDGGHHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 181 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 228
>gi|163759649|ref|ZP_02166734.1| ribose-5-phosphate isomerase A [Hoeflea phototrophica DFL-43]
gi|162283246|gb|EDQ33532.1| ribose-5-phosphate isomerase A [Hoeflea phototrophica DFL-43]
Length = 233
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 160/229 (69%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA Q+K AA+ A+ +V DGM LG+GTGSTA EF+ LLA+K+A+GF+V +P+S T
Sbjct: 1 MDARQLKIQAAKAALDHVEDGMRLGIGTGSTADEFVRLLAEKVADGFKVHGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL+S +D+ +DL+IDG DEID L L+KG GGALLREKI+A A++R IVI D
Sbjct: 61 LCVELGVPLYSLDDMPELDLTIDGADEIDGALTLVKGGGGALLREKIVASASARMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG+ LPIE+ +FG+ T A++ +AS GL+ + R + G +++DG ++I
Sbjct: 121 ESKLVDTLGQFPLPIEVAKFGMVATHYAVERLASRLGLSGTIEQRADKDGPYLTDGDHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+DA FG IPD + I+ L IPGV+EHGLF+NM AII + G +L
Sbjct: 181 LDASFGRIPDAEAIANGLAAIPGVVEHGLFLNMASAAIIASPGGARTLL 229
>gi|222086215|ref|YP_002544747.1| ribose 5-phosphate isomerase A [Agrobacterium radiobacter K84]
gi|254808699|sp|B9JFX9|RPIA_AGRRK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|221723663|gb|ACM26819.1| ribose 5-phosphate isomerase A [Agrobacterium radiobacter K84]
Length = 233
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 116/228 (50%), Positives = 156/228 (68%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA QMK AAR A+ YV GM LG+GTGSTA+EF+ LLA+K+A G ++ +P+S T
Sbjct: 1 MDARQMKIEAARAALAYVESGMRLGVGTGSTAEEFVRLLAEKVAAGLVIEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ +DL+IDG DE+D LRLIKG GGALLREKI+A ++ R IVI D
Sbjct: 61 LCVDLGVPLKSLDELPELDLTIDGADEVDGALRLIKGGGGALLREKIVAASSQRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG LPIE++ FG+ T +++ A+ GL+ L LR++ G F++DGG++I
Sbjct: 121 ESKVVQTLGAFALPIEVNPFGLVSTRIQIEKTAARLGLSGALNLRQSEDGNFMTDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S L +IPGV+EHGLFINM AII G +
Sbjct: 181 IDASFGRIPDAEALSIALNSIPGVVEHGLFINMATLAIIAGPSGARTL 228
>gi|39935050|ref|NP_947326.1| ribose-5-phosphate isomerase A [Rhodopseudomonas palustris CGA009]
gi|192290585|ref|YP_001991190.1| ribose-5-phosphate isomerase A [Rhodopseudomonas palustris TIE-1]
gi|67461433|sp|Q6N8C3|RPIA_RHOPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|229568613|sp|B3QCR0|RPIA_RHOPT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|39648901|emb|CAE27422.1| ribose 5-phosphate isomerase [Rhodopseudomonas palustris CGA009]
gi|192284334|gb|ACF00715.1| ribose 5-phosphate isomerase [Rhodopseudomonas palustris TIE-1]
Length = 232
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 106/229 (46%), Positives = 146/229 (63%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD ++KR AA RA++ V GM LG+GTGSTAK F+ LL +++ G + +P+S T
Sbjct: 1 MDKEELKRRAAARALEEVRGGMKLGLGTGSTAKHFVELLGERVRLGLEIIGVPTSEVTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I L S +++ +D++IDG DE+D L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 DAERCGIRLTSLDEIDRLDITIDGADEVDHHLDLIKGGGGALLREKIVAAASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
ESK VD LGR LPIE+ FG+ T AL+ + G + EL+LR G FV+DGG++
Sbjct: 121 ESKLVDTLGRFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+DA G IPD ++ L IPGV+EHGLF+ M ++ +DG +
Sbjct: 181 ILDAQLGRIPDAPRLAQLLSVIPGVVEHGLFVGMASTVVLAGADGIRTI 229
>gi|121602568|ref|YP_988910.1| ribose-5-phosphate isomerase A [Bartonella bacilliformis KC583]
gi|166200032|sp|A1USF7|RPIA_BARBK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|120614745|gb|ABM45346.1| ribose 5-phosphate isomerase A [Bartonella bacilliformis KC583]
Length = 233
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 157/231 (67%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+A ++K+ AA +A+++V DGM LG+G+GSTA EF+ LL +++ANG V + +S +E
Sbjct: 1 MNAQELKKVAAAKALEFVQDGMRLGIGSGSTANEFIRLLGERVANGLHVIGVATSHYSEQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ +P+ + E + +DL IDG DEI + LIKG GGALLREKI+A A+ ++I D
Sbjct: 61 LCRQVGVPVTTLEQIPELDLDIDGADEIGPNMTLIKGGGGALLREKIVAAASHEMLIIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG LPI ++QFG++ T SA++++A GL+ ++ LR NG F +D G++I
Sbjct: 121 ETKVVKTLGAFALPIAVNQFGLSVTRSAIEKMAKGLGLSGKVTLRMNGDNPFKTDDGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
DA +G I P+++S L IPGVIEHGLF+ + +II +DG+ +L+K
Sbjct: 181 FDASWGHIVQPKLLSNALFEIPGVIEHGLFVGLASRSIIAMADGQIKILEK 231
>gi|150396782|ref|YP_001327249.1| ribose-5-phosphate isomerase A [Sinorhizobium medicae WSM419]
gi|166229243|sp|A6U9T4|RPIA_SINMW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150028297|gb|ABR60414.1| ribose 5-phosphate isomerase [Sinorhizobium medicae WSM419]
Length = 231
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 116/228 (50%), Positives = 161/228 (70%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA QMK AA A+++V +GM LG+GTGSTA+EF+ +LA+K+A+GF++ +P+S T
Sbjct: 1 MDARQMKIKAAEAALEHVENGMRLGIGTGSTAEEFVRVLAEKVASGFQISGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ +DL+IDG DE+D +LRLIKG GGALLREKI+A A++R IVI D
Sbjct: 61 LCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASARMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K VD LG LPIE++ FG T A+++VAS GL ++ +R +G G F++DGG+ I
Sbjct: 121 ETKVVDVLGAFKLPIEVNPFGQLATRLAIEKVASRLGLTGDIVVRASGDGPFMTDGGHLI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD ++ EL IPGV+EHGLFI M AII +G +
Sbjct: 181 LDASFGRIPDADALAVELNAIPGVVEHGLFIEMASMAIIAGPEGARTL 228
>gi|90423579|ref|YP_531949.1| ribose-5-phosphate isomerase A [Rhodopseudomonas palustris BisB18]
gi|122476506|sp|Q216Q6|RPIA_RHOPB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|90105593|gb|ABD87630.1| ribose-5-phosphate isomerase [Rhodopseudomonas palustris BisB18]
Length = 232
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 105/232 (45%), Positives = 152/232 (65%), Gaps = 2/232 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + ++KR AA A+++V DGM LG+GTGSTAK F+ LL +++ G V +P+S T
Sbjct: 1 MSSDELKRQAAAAALEHVRDGMKLGLGTGSTAKHFVELLGERVRGGLNVVGVPTSEVTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I L + ++V +DL++DG DEI++ L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 DALRCGIALTTLDEVDRLDLTVDGADEINAALNLIKGGGGALLREKIVAAASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
ESK V LGR LPIE++ FG+ TL A++E + G+ L LR+ G FV+DGG++
Sbjct: 121 ESKLVANLGRFPLPIEVNSFGLAATLRAIEEACAECGVFGPLSLRKGSDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA G IPD ++ +L IPGV+E+GLFI + A++ +G ++++
Sbjct: 181 IVDAQLGRIPDAPSLADQLNAIPGVVENGLFIGLASMAVLAGPNG-IRIIER 231
>gi|15965609|ref|NP_385962.1| ribose-5-phosphate isomerase A [Sinorhizobium meliloti 1021]
gi|307302728|ref|ZP_07582484.1| ribose 5-phosphate isomerase [Sinorhizobium meliloti BL225C]
gi|307318576|ref|ZP_07598010.1| ribose 5-phosphate isomerase [Sinorhizobium meliloti AK83]
gi|30173356|sp|Q92PB8|RPIA_RHIME RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|15074790|emb|CAC46435.1| Probable ribose 5-phosphate isomerase [Sinorhizobium meliloti 1021]
gi|306895916|gb|EFN26668.1| ribose 5-phosphate isomerase [Sinorhizobium meliloti AK83]
gi|306903092|gb|EFN33683.1| ribose 5-phosphate isomerase [Sinorhizobium meliloti BL225C]
Length = 231
Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 118/228 (51%), Positives = 161/228 (70%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA QMK AA A+++V GM LG+GTGSTA+EF+ LLA+K+A+GF++ +P+S T
Sbjct: 1 MDARQMKIKAAEAALEHVESGMRLGIGTGSTAEEFVRLLAEKVASGFQISGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ +DL+IDG DE+D +LRLIKG GGALLREKI+A A++R IVI D
Sbjct: 61 LCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASTRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIEI+ FG T A+++ AS GL E+ +R +G G+F++DGG+ I
Sbjct: 121 ESKVVDVLGAFKLPIEINPFGQVATRLAIEKTASRLGLAGEIVVRSSGDGVFMTDGGHLI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD ++ EL IPGV+EHGLFI++ AII +G +
Sbjct: 181 LDASFGRIPDADALAVELNAIPGVVEHGLFIDVASMAIIAGPEGARTL 228
>gi|154251548|ref|YP_001412372.1| ribose 5-phosphate isomerase [Parvibaculum lavamentivorans DS-1]
gi|171769568|sp|A7HS32|RPIA_PARL1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|154155498|gb|ABS62715.1| ribose 5-phosphate isomerase [Parvibaculum lavamentivorans DS-1]
Length = 231
Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 102/229 (44%), Positives = 140/229 (61%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+A K+ AA RA+++V GM LGMGTGSTA+ F+ L +K+ G + +P+S T
Sbjct: 1 MNADDQKKAAAVRALEFVKPGMKLGMGTGSTAEHFVRALGEKVKAGLDIVGVPTSERTAK 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + +D +D+++DG DE+D +LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LAASLGIPLTNLDDTPHLDITVDGADELDGKLRLIKGGGGALLREKIVATASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SK V LG LP+E+ FG T + EVAS G ++ R + G F +D N+
Sbjct: 121 ASKLVKTLGSFPLPVEVIPFGSAVTARKIAEVASAHGCTGKMSRRADEYGEPFFTDSENF 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I D FG IPDP +S L IPGV+++GLFI + AI+GT G ++
Sbjct: 181 IYDCAFGSIPDPDGLSAALNRIPGVVDNGLFIGIAAMAIVGTDKGTDII 229
>gi|86750497|ref|YP_486993.1| ribose-5-phosphate isomerase A [Rhodopseudomonas palustris HaA2]
gi|123003946|sp|Q2IUM8|RPIA_RHOP2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|86573525|gb|ABD08082.1| ribose-5-phosphate isomerase [Rhodopseudomonas palustris HaA2]
Length = 232
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 104/229 (45%), Positives = 145/229 (63%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ +KR AA RA+ V DGM +G+GTGSTAK F+ LL +K+ G V +P+S T
Sbjct: 1 MNKEDLKRQAAARALDEVRDGMKIGLGTGSTAKHFVELLGEKVRAGLDVIGVPTSEVTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I L + +++ +DL++DG DEID RL LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 DAERCGIRLTTLDEIDRLDLTVDGADEIDPRLELIKGGGGALLREKIVAAASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
E+K VD LG LP+E+ FG+ T A+++ + G + L+LR G FV+DGG++
Sbjct: 121 ETKWVDCLGHFPLPVEVIPFGLAATRRAIEQACAEVGASGRLQLREGKDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+DA G IPD ++ L IPGV+EHGLFI + ++ +DG V
Sbjct: 181 IIDAHLGRIPDAPRLAQLLSAIPGVVEHGLFIGIASTVVLAGTDGIRTV 229
>gi|254500896|ref|ZP_05113047.1| ribose 5-phosphate isomerase A [Labrenzia alexandrii DFL-11]
gi|222436967|gb|EEE43646.1| ribose 5-phosphate isomerase A [Labrenzia alexandrii DFL-11]
Length = 232
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 100/228 (43%), Positives = 141/228 (61%), Gaps = 1/228 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K+ AA RA + V+ GM LG+GTGSTA+ F+ LA ++A+G V +P+S T
Sbjct: 1 MS-DNLKQQAAERAAEDVISGMRLGIGTGSTAEFFVHALAKRVADGLDVIGVPTSERTAE 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I L + E++ +DL++DG DE+D+ L LIKG GGALLREKI+A A+ + IVI D
Sbjct: 60 LAASLGIKLTTLEELPELDLTVDGADELDANLALIKGGGGALLREKIVAAASGKMIVIAD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LPIE+ FG T A+ + GL + L+LR G FV+DGG++I
Sbjct: 120 GTKNVDTLGQFPLPIEVVPFGQEATRRAILALLREMGLPQNLQLRMAGEHPFVTDGGHHI 179
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
DA I DP+ ++ L IPGV+EHGLF+N+ A + DG +
Sbjct: 180 FDAHLLKIEDPETLAQALVKIPGVVEHGLFLNLASKAYVAGEDGVKTI 227
>gi|30173339|sp|Q8UEZ0|RPIA_AGRT5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
Length = 231
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 117/224 (52%), Positives = 159/224 (70%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA QMK AA A+ +V DGM LG+GTGSTA+EF+ LLA+K+A G +V+ +P+S T
Sbjct: 1 MDARQMKIKAAEAALSHVQDGMRLGIGTGSTAEEFVRLLAEKVAAGLKVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ +DL+IDG DE+D LRL+KG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPELDLTIDGADEVDHVLRLVKGGGGALLREKIVAAASGRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V+ LG LPIEI+ FG T A++++A+ GL+ EL +R +G G F++DGG+ I
Sbjct: 121 QSKVVETLGAFPLPIEINPFGQVATRIAIEKLAARSGLSGELTMRSSGDGAFMTDGGHLI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+DA FG IPD + ++ EL IPGV+EHGLFIN+ AII +G
Sbjct: 181 LDASFGRIPDAEALARELNTIPGVVEHGLFINLASLAIIAGPEG 224
>gi|319404350|emb|CBI77950.1| Ribose 5-phosphate isomerase [Bartonella rochalimae ATCC BAA-1498]
Length = 234
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 153/230 (66%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD ++K+ AA +A+++V D M LG+G+GST EF+ LL + I NG R+ + +S ++E+
Sbjct: 1 MDIQKLKKMAAAQALEFVQDDMNLGIGSGSTVNEFIRLLGECITNGLRITGVATSYHSEH 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ +P+ + + +S +DL IDG DEID ++ LIKG GGALL EKI+A A+ +I D
Sbjct: 61 LCRQFGVPITTLDKISKLDLCIDGADEIDPQMSLIKGRGGALLHEKIVASASDEMFIIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG +PIE++ FG+N T A+++V + GL+ E++LR NG F +DGG++I
Sbjct: 121 ETKMVKTLGASGVPIEVNPFGMNATCKAIEKVVNNLGLSGEIKLRMNGDIPFETDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
VDAF G I +P+ +S L +PGV+EHGLF+ I+ +DG L+
Sbjct: 181 VDAFLGSILNPKELSDALLGVPGVVEHGLFLGFASRVIVAMADGTIKFLE 230
>gi|325293003|ref|YP_004278867.1| ribose 5-phosphate isomerase A [Agrobacterium sp. H13-3]
gi|325060856|gb|ADY64547.1| ribose 5-phosphate isomerase A [Agrobacterium sp. H13-3]
Length = 231
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 116/227 (51%), Positives = 161/227 (70%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA QMK AA A+ +V DGM LG+GTGSTA+EF+ LLA+K+A G +V+ +P+S T
Sbjct: 1 MDARQMKIKAAEAALSHVQDGMRLGIGTGSTAEEFVRLLAEKVAAGLKVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ +DL+IDG DE+D LRL+KG GGALLREKI+A A++R IVI D
Sbjct: 61 LCVELGVPLKSLDELPELDLTIDGADEVDHGLRLVKGGGGALLREKIVAAASARMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V+ LG LPIEI+ FG T A++++A+ GL+ +L +R +G G F++DGG+ I
Sbjct: 121 QSKVVEMLGAFPLPIEINPFGQVATQIAIEKLAARSGLSGDLTMRSSGDGAFMTDGGHLI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+DA FG IPD + ++ EL IPGV+EHGLFIN+ AII +G +
Sbjct: 181 LDASFGRIPDAEALARELNTIPGVVEHGLFINLASLAIIAGPEGARV 227
>gi|319408416|emb|CBI82071.1| Ribose 5-phosphate isomerase [Bartonella schoenbuchensis R1]
Length = 234
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 107/230 (46%), Positives = 158/230 (68%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA ++K+ AA +A+++V + M LG+G GST EF+ LL +++ANG RV + +S +E
Sbjct: 1 MDAQKLKKMAATKALEFVQNDMRLGIGAGSTVNEFIRLLGERVANGLRVIGVAASHYSEQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C + +P+ + E +S +DL IDG DEI + LIKG GGALLREKI+A A+ +VI D
Sbjct: 61 LCLKYGVPVTTLEQISELDLDIDGADEIGPNMTLIKGGGGALLREKIVAAASRTMLVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V LG LPIE++QFG++ T A+++VA GL+ E+RLR NG+ F +D G++I
Sbjct: 121 ETKVVKTLGSFALPIEVNQFGMSVTRKAIEKVADDLGLSGEIRLRMNGNIPFKTDEGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+DAF+G I P+I+S L IPGV+EHGLF+ + +II +DG +L+
Sbjct: 181 LDAFWGCIMQPKILSDALFEIPGVVEHGLFLGLASRSIIAMADGTIKILE 230
>gi|299135679|ref|ZP_07028863.1| ribose 5-phosphate isomerase [Acidobacterium sp. MP5ACTX8]
gi|298601803|gb|EFI57957.1| ribose 5-phosphate isomerase [Acidobacterium sp. MP5ACTX8]
Length = 226
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 131/227 (57%), Gaps = 4/227 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K +RA+++V DGM +G+GTGST+ F+ L +++ G +++ + SS + N
Sbjct: 1 MTQDEAKALVGKRAVEFVQDGMAVGLGTGSTSTLFIKALGERVKQGLKIRCVASSDASHN 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + + + +D+ IDG DE+ L LIKG GGA+LREKI+A +A +FIV+ D
Sbjct: 61 LAASLGMDITTLDKLPDLDVYIDGADEVAPGLTLIKGGGGAMLREKIVASSAKKFIVVVD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K V LGR LP+E+ + + + GLN R +NG G +++D GNYI
Sbjct: 121 QTKVVKTLGRFPLPVEVIKMALPLV----HSKLAALGLNPSQRPAKNGDGPYLTDEGNYI 176
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+D G IPDP + + I GV+EHGLF+NM A+I G
Sbjct: 177 LDCACGQIPDPAATAAAIRGIVGVVEHGLFLNMASLALIAGDGGVTE 223
>gi|251796690|ref|YP_003011421.1| ribose 5-phosphate isomerase [Paenibacillus sp. JDR-2]
gi|247544316|gb|ACT01335.1| ribose 5-phosphate isomerase [Paenibacillus sp. JDR-2]
Length = 224
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 142/229 (62%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++ KR AA +A++ V DGM +G+GTGSTA + + K+ G +Q + +S +E
Sbjct: 1 MESKRIAAEKAVELVKDGMKVGLGTGSTAYWAIQAIGRKVKEEGLTIQAVATSVQSEQLA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
K IP+ DV +DL+IDG DE+D L LIKG GGALLREKI+A A+ + I+I DES
Sbjct: 61 KELGIPMMPFADVDVLDLTIDGADEVDPALHLIKGGGGALLREKIVAAASKQLIIIVDES 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG+ LP+EI F T+ L+++ E +LR+NG L+V+D GNYI D
Sbjct: 121 KDVKQLGKFPLPVEIVPFAFELTVRKLRKLGC------EPKLRKNGEELYVTDNGNYIAD 174
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
FG I DP+ + +L IPGV+++GLFI+M I+G++DG + K
Sbjct: 175 CEFGAIADPEALHDDLNRIPGVVDNGLFIHMASLVIVGSADGSIRSITK 223
>gi|310641465|ref|YP_003946223.1| ribose-5-phosphate isomerase a [Paenibacillus polymyxa SC2]
gi|309246415|gb|ADO55982.1| Ribose-5-phosphate isomerase A [Paenibacillus polymyxa SC2]
Length = 222
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 87/228 (38%), Positives = 137/228 (60%), Gaps = 6/228 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ AA +A++ + DGM +G+GTGSTA + + +++A G +Q + +S+ +E+ +
Sbjct: 1 MNLKQKAAEKAVEAIQDGMKVGLGTGSTAYWAIQKIGERVAQGLHIQAVATSQASEDQAR 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ + + +D++IDG DE++ +L L+KG GGALLREKI+ + R I+I DESK
Sbjct: 61 GLGIPIIPFDQIGRLDVTIDGADEVNEQLVLVKGGGGALLREKIVESNSDRLIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+E+ F TL AL++ + R F++D GNYI D
Sbjct: 121 DVKVLGAFPLPVEVVPFASEWTLEALRQTGC------KAEWRMKDGERFLTDNGNYIADC 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+G I +PQ + L IPGV+++GLFINM D II ++G+ V K
Sbjct: 175 RYGTIENPQELEIRLNQIPGVVDNGLFINMADQVIIARANGQIDVRNK 222
>gi|300023360|ref|YP_003755971.1| ribose 5-phosphate isomerase [Hyphomicrobium denitrificans ATCC
51888]
gi|299525181|gb|ADJ23650.1| ribose 5-phosphate isomerase [Hyphomicrobium denitrificans ATCC
51888]
Length = 241
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 146/231 (63%), Gaps = 2/231 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + KR AA +A+ YV DGM LG+GTGSTA +F+ LL +K+ G +V +P+S T
Sbjct: 1 MSSDDWKRQAAEQALSYVEDGMKLGLGTGSTAAKFVDLLGEKVKGGLKVVCVPTSEATRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + ++ ++DL++DG DE+D +RLIKG GGALLREKI+A A+ R ++I D
Sbjct: 61 QAAALGIPLATLDEHPALDLTVDGADEMDEEMRLIKGGGGALLREKIVAVASDRVVIIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SKRVD LGR LPIE+ FG+ T + ++A+ G + E++LR G FV+D GN+
Sbjct: 121 SSKRVDVLGRFPLPIEVVPFGLASTQRLIFQMATDAGCDGEIKLRLGAGGAPFVTDNGNH 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+D FG I DP+ + L +PGV+E GLF+ + D I+ G VL
Sbjct: 181 ILDCSFGAIDDPEALDDALKLVPGVVETGLFLGIADVGIVAGPMG-VEVLS 230
>gi|27378866|ref|NP_770395.1| ribose-5-phosphate isomerase A [Bradyrhizobium japonicum USDA 110]
gi|41017725|sp|Q89NS9|RPIA_BRAJA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|27352015|dbj|BAC49020.1| ribose 5-phosphate isomerase [Bradyrhizobium japonicum USDA 110]
Length = 241
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 153/236 (64%), Gaps = 6/236 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ Q+KR AA RA++ V DGM LG+GTGSTAK F+ LL +++A G +V +P+S T
Sbjct: 1 MNMDQLKRQAAARALEEVRDGMQLGLGTGSTAKHFVELLGERVAAGLKVIGVPTSEATRL 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+PL + +++ +D+++DG DEID L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 DATRCGVPLTTLDEIDHLDITVDGADEIDPELNLIKGGGGALLREKIVAAASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-----LFVSD 175
++K V LGR LPIE+ FG+ T A++ + G++ ++ +R+ G +FV+D
Sbjct: 121 DTKWVPTLGRFPLPIEVIPFGLGATRRAIETAFAQCGVSGQMAVRKAKGGDKDGHVFVTD 180
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GG++I+DA G I DP ++ L IPGV+EHGLFI + A++ +G V+++
Sbjct: 181 GGHWILDAQLGRIVDPPSLAKALSAIPGVVEHGLFIGLASSAVLAGGEG-IRVIER 235
>gi|315122392|ref|YP_004062881.1| ribose-5-phosphate isomerase A [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495794|gb|ADR52393.1| ribose-5-phosphate isomerase A [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 242
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 183/230 (79%), Positives = 208/230 (90%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
DALQMK+N AR AIQ+V DGMTLGMGTGST+KEFMILLA+KIANG VQV+PSSR+TENF
Sbjct: 13 DALQMKKNVARLAIQHVDDGMTLGMGTGSTSKEFMILLAEKIANGLHVQVVPSSRDTENF 72
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
CK + I L S EDVSS+DLS+DGFDEIDSRLRLIKGYGGA+LREKIIA+A+SR IVIGDE
Sbjct: 73 CKKNGILLRSIEDVSSIDLSVDGFDEIDSRLRLIKGYGGAILREKIIANASSRVIVIGDE 132
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SKRVDFLGRGMLPIE+D FG+ T+SAL E+ASC GL E+ RLRRNGS LFVSDGG++IV
Sbjct: 133 SKRVDFLGRGMLPIEVDPFGMRATISALAELASCLGLKEDFRLRRNGSELFVSDGGHHIV 192
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
DAFFGFIPDPQ++S EL NIPGV+EHGLFI+MVDCAIIG S+GECLVL+K
Sbjct: 193 DAFFGFIPDPQLLSEELSNIPGVMEHGLFIDMVDCAIIGMSNGECLVLEK 242
>gi|14520981|ref|NP_126456.1| ribose-5-phosphate isomerase A [Pyrococcus abyssi GE5]
gi|14548245|sp|Q9V0L6|RPIA_PYRAB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|5458198|emb|CAB49687.1| rpi ribose 5-phosphate isomerase [Pyrococcus abyssi GE5]
Length = 229
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 8/234 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
M+ +MK+ AA+ A++++ D M +G+GTGST F+ LL D I G + +P+S +
Sbjct: 1 MNIEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIRLLGDMIKKGEVSDIVGVPTSYQS 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
IP+ + + V ++D+++DG DE+D L LIKG G AL EKII A FIV+
Sbjct: 61 RLLAIESGIPVATLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIESRAGMFIVL 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE K VD + +PIE+ A+ E S F +LR+ N G ++D G
Sbjct: 121 VDERKLVDYLCQKMPVPIEVIPQAW----RAIVEELSIFNAEAKLRMGVNKDGPVITDNG 176
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+I+DA F I DP + EL IPGV+E+G+F ++ D I+GT +G L++
Sbjct: 177 NFIIDAKFPRIDDPLDMEIELNTIPGVVENGIFADIADIVIVGTKEG-VKTLER 229
>gi|84688016|ref|ZP_01015878.1| ribose 5-phosphate isomerase [Maritimibacter alkaliphilus HTCC2654]
gi|84663956|gb|EAQ10458.1| ribose 5-phosphate isomerase [Rhodobacterales bacterium HTCC2654]
Length = 260
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
K AA+RA+ +V DGM +G+GTGSTA + L +++ G R+ +P+S T
Sbjct: 9 DTAKFVAAKRAVDFVEDGMRVGLGTGSTAAWMVRCLGERVREEGLRIAGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGA L+EKI+A A+ + IVI D S
Sbjct: 69 RQVGIRVISLDEARWLDLTIDGADEFDMDLNLIKGGGGAHLQEKIVATASDQMIVITDPS 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K+V+ LG LP+E+ FG + + ++E + L + LR NG FV+D GN+I+
Sbjct: 129 KQVEHLGSFPLPVEVIPFGWQTSKALIEETLASLEVLGQTSALRMNGEAPFVTDEGNHII 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D + I +P+ +S L IPGV+E+GLFI++ D +IG DG V+
Sbjct: 189 DLYLQRIGNPRQLSMVLNQIPGVVENGLFIDICDKVVIGHQDGRVEVID 237
>gi|83951307|ref|ZP_00960039.1| ribose 5-phosphate isomerase [Roseovarius nubinhibens ISM]
gi|83836313|gb|EAP75610.1| ribose 5-phosphate isomerase [Roseovarius nubinhibens ISM]
Length = 262
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
Q K AA++A++YV DGM +G+GTGSTA + L + + G R++ +P+S T
Sbjct: 9 DQAKFVAAKKAVEYVEDGMRVGLGTGSTAAWMVRCLGEMVREDGLRIKGVPTSTRTAALA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + IVI D
Sbjct: 69 QELGIDVVSLDEAKWLDLTIDGADEFDGELNLIKGGGGALLQEKIVATASDQMIVIADVG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG T + ++E+ L ++ LR +G +V+D GN+I+
Sbjct: 129 KEVESLGHFPLPIEVIPFGWQTTRALVEEMLVSMDVLGRDVTLRMSGDRPYVTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D G I +P+ +S L +PGV+E+GLFI++ D +G DG V
Sbjct: 189 DLHLGRIGNPRQLSMVLNQVPGVVENGLFIDICDIVCVGYGDGRVEVRD 237
>gi|308068580|ref|YP_003870185.1| ribose-5-phosphate isomerase A (phosphoriboisomerase A) (PRI)
[Paenibacillus polymyxa E681]
gi|305857859|gb|ADM69647.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Paenibacillus polymyxa E681]
Length = 222
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 136/228 (59%), Gaps = 6/228 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ AA +A++ + DGM +G+GTGSTA + + +++A G +Q + +S+ +E+ +
Sbjct: 1 MNLKQKAAEKAVEAIQDGMKVGLGTGSTAFWAIQKIGERVAQGLHIQAVATSQASEDQAR 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ + + +D++IDG DE++ +L L+KG GGALLREKI+ + R I+I DESK
Sbjct: 61 ELGIPIIPFDQIGRLDVTIDGADEVNEQLVLVKGGGGALLREKIVESNSDRLIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+E+ F TL AL++ + R F++D GNYI D
Sbjct: 121 DVKVLGAFPLPVEVVPFASEWTLEALRQTGC------KAEWRMKDGERFLTDNGNYIADC 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ I +PQ + L IPGV+++GLFINM D II ++G+ V K
Sbjct: 175 RYDTIENPQELEIRLNQIPGVVDNGLFINMADQVIIARANGQIDVRNK 222
>gi|14591178|ref|NP_143254.1| ribose-5-phosphate isomerase A [Pyrococcus horikoshii OT3]
gi|6226033|sp|O50083|RPIA_PYRHO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|21730740|pdb|1LK5|A Chain A, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
gi|21730741|pdb|1LK5|B Chain B, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
gi|21730742|pdb|1LK5|C Chain C, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
gi|21730743|pdb|1LK5|D Chain D, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
gi|21730744|pdb|1LK7|A Chain A, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
gi|21730745|pdb|1LK7|B Chain B, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
gi|21730746|pdb|1LK7|C Chain C, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
gi|21730747|pdb|1LK7|D Chain D, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
gi|3257798|dbj|BAA30481.1| 229aa long hypothetical ribose 5-phosphate isomerase [Pyrococcus
horikoshii OT3]
Length = 229
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
M+ +MK+ AA+ A++++ D M +G+GTGST F+ LL +K+ G + +P+S
Sbjct: 1 MNVEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQA 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ H IP+ S + V ++D+++DG DE+D L LIKG G AL EKII + A FIV+
Sbjct: 61 KLLAIEHDIPIASLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVL 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE K VD + +PIE+ + E S F ELR+ N G ++D G
Sbjct: 121 VDERKLVDYLCQKMPVPIEVIPQAWKAII----EELSIFNAKAELRMGVNKDGPVITDNG 176
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N+I+DA F I DP + EL IPGVIE+G+F ++ D I+GT +G +
Sbjct: 177 NFIIDAKFPRIDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREGVKKL 227
>gi|91976532|ref|YP_569191.1| ribose-5-phosphate isomerase A [Rhodopseudomonas palustris BisB5]
gi|123762832|sp|Q139E9|RPIA_RHOPS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|91682988|gb|ABE39290.1| ribose-5-phosphate isomerase [Rhodopseudomonas palustris BisB5]
Length = 232
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 104/229 (45%), Positives = 148/229 (64%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +KR AA RA++ V GM LG+GTGSTA+ F+ LL +K+ G V +P+S T
Sbjct: 1 MDKEDLKRQAAARALEEVRSGMKLGLGTGSTARHFVELLGEKVRGGLDVIGVPTSEVTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I L + +++ +DL++DG DE+D+RL LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 DAERCGIRLTTLDEIDRLDLTVDGADEVDTRLELIKGGGGALLREKIVAAASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
ESK VD LG+ LP+E+ FG+ T A+++ + G +L+LR +G FV+DGG++
Sbjct: 121 ESKWVDCLGKFPLPVEVIPFGLAATRRAIEKAFTQVGAAGQLKLRDGEAGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
IVDA G IPD ++ L IPGV+EHGLFI + ++ ++G V
Sbjct: 181 IVDAHLGRIPDAPRLAKLLSEIPGVVEHGLFIGIASTVVLAGTEGIRTV 229
>gi|18977630|ref|NP_578987.1| ribose-5-phosphate isomerase A [Pyrococcus furiosus DSM 3638]
gi|24638182|sp|Q8U1F0|RPIA_PYRFU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|18893352|gb|AAL81382.1| ribose 5-phosphate isomerase [Pyrococcus furiosus DSM 3638]
Length = 229
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 127/231 (54%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
M+ +MK+ AR A++++ D M +G+GTGST F+ L + I G + +P
Sbjct: 1 MNVEEMKKAVARAALEFIEDDMVVGLGTGSTTAYFIRYLGEMIEKGKVEDIYGVPPPIKQ 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ +P+ S + V ++D+++DG DE+D L LIKG G AL EKII + A FIV+
Sbjct: 61 KFLRMESGVPVLSLDQVDAIDIAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVL 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK VD + +PIE+ L E S F ELR+ G V++ G
Sbjct: 121 VDESKLVDYLCQKMPVPIEVIPAAWKAIL----EELSIFNAKAELRMGVKKDGPVVTENG 176
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N+I+DA F I DP + EL IPGV+E+G+F ++ D ++GT +G +
Sbjct: 177 NFIIDAKFPRIDDPLDMEIELNTIPGVVENGIFADIADIVLVGTKEGVKRL 227
>gi|260575471|ref|ZP_05843470.1| ribose 5-phosphate isomerase [Rhodobacter sp. SW2]
gi|259022391|gb|EEW25688.1| ribose 5-phosphate isomerase [Rhodobacter sp. SW2]
Length = 262
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA+++V GM LG+GTGSTA + LA++I G RV +P+S T
Sbjct: 9 DKAKFVAAKRAVEFVETGMKLGLGTGSTAAWMVRCLAERIREEGLRVTGVPTSSRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +P+ S ++ +DL+IDG DEID L LIKG G ALL+EKI+A A+ + IVI D +
Sbjct: 69 RSLGVPIMSLDEAKWLDLTIDGADEIDPNLNLIKGGGAALLQEKIVATASDQMIVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG T + L+E LN + LR NG ++D NYIV
Sbjct: 129 KEVGCLGAFPLPVEVIPFGWQTTKALLEETLVSMDVLNRDCTLRMNGDRPLLTDEANYIV 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ ++ L IPGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLHLKRIGNPRQLALVLNQIPGVVENGLFIDICDIVVIGNGDGRVTVRD 237
>gi|283788430|ref|YP_003368295.1| ribose 5-phosphate isomerase A [Citrobacter rodentium ICC168]
gi|282951884|emb|CBG91600.1| ribose 5-phosphate isomerase A [Citrobacter rodentium ICC168]
Length = 219
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIPVFDLNEVDSLGVYVDGADEINPHMQMIKGGGAALTREKIIASVAKKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ASKEVDILGNFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGMEILDPVALENAINAIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|319899023|ref|YP_004159116.1| Ribose 5-phosphate isomerase [Bartonella clarridgeiae 73]
gi|319402987|emb|CBI76542.1| Ribose 5-phosphate isomerase [Bartonella clarridgeiae 73]
Length = 226
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 147/222 (66%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
AA +A+++V D M LG+GTGST EF+ LL +KIA+G R+ + +S +E C+ +P
Sbjct: 1 MAAAKALEFVQDDMRLGIGTGSTVNEFIRLLGEKIADGLRITGVATSYYSEWLCRQFGVP 60
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL 128
+ + E VS +D IDG DEI ++ LIKG GGALL EKI+A A+ +VI DE+K V L
Sbjct: 61 VTNLEKVSELDFCIDGADEIGPKMTLIKGGGGALLHEKIVASASREMLVIADETKMVKTL 120
Query: 129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFI 188
G +PIE++ FG+N T A+++V GL+ +++LR N F +DGG++I DAF G I
Sbjct: 121 GASGVPIEVNPFGMNITCKAIEKVVKELGLSGKIKLRMNEDIPFETDGGHFIFDAFLGSI 180
Query: 189 PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
DP+++S L IPGV+EHGLF+ + AII +DG VL+
Sbjct: 181 VDPKVLSDALLGIPGVVEHGLFLGVASRAIIAMADGTIKVLE 222
>gi|260433200|ref|ZP_05787171.1| ribose 5-phosphate isomerase A [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417028|gb|EEX10287.1| ribose 5-phosphate isomerase A [Silicibacter lacuscaerulensis
ITI-1157]
Length = 261
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 90/237 (37%), Positives = 130/237 (54%), Gaps = 7/237 (2%)
Query: 1 MDA-----LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPS 54
M KR AA RA + V DGM +G+GTGSTA + L +++ G +++ +P+
Sbjct: 1 MTQKLSPIDTAKRVAAYRAAEMVEDGMRVGLGTGSTAAWLVRRLGERVKNEGLKIRGVPT 60
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
S T + I + S + +DL+IDG DE D L LIKG G ALL+EKI+A A+
Sbjct: 61 STATAQLAREVGIEVVSLDQAGWLDLTIDGADEFDGELNLIKGGGAALLQEKIVATASDL 120
Query: 115 FIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFV 173
+VI D K V+ LG LPIE+ FG T + ++E+ L LR NG V
Sbjct: 121 MVVIADAGKEVETLGAFPLPIEVIPFGWQTTRTLVEELLDSMDVLGTSATLRMNGEAPTV 180
Query: 174 SDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+D GN+I+D I +P+ ++ L IPGV+E+GLFI++ D +IG DG +
Sbjct: 181 TDEGNHILDLHLQRIGNPRQLALALNQIPGVVENGLFIDICDKVVIGFGDGRVELRD 237
>gi|316934845|ref|YP_004109827.1| ribose 5-phosphate isomerase [Rhodopseudomonas palustris DX-1]
gi|315602559|gb|ADU45094.1| ribose 5-phosphate isomerase [Rhodopseudomonas palustris DX-1]
Length = 232
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 103/229 (44%), Positives = 144/229 (62%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD ++KR AA RA+ V GM LG+GTGSTAK F+ LL +++ G V +P+S T
Sbjct: 1 MDKEELKRRAAARALDEVRGGMKLGLGTGSTAKHFVELLGERVRAGLDVVGVPTSEVTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I L + +++ +D+++DG DE+D L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 DAERCGIQLTTLDEIDHLDITVDGADEVDRNLDLIKGGGGALLREKIVAAASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
ESK VD LGR LPIE+ FG+ T A+++ + G EL+LR G FV+DGG++
Sbjct: 121 ESKLVDTLGRFPLPIEVIPFGLAATRRAVQDACAAAGCAGELKLRPGKDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
IVDA G IPD ++ L IPGV+EHGLF+ + ++ + G +
Sbjct: 181 IVDAKLGRIPDAPRLAQLLSAIPGVVEHGLFVGIARTVVLAGATGIRTI 229
>gi|115524000|ref|YP_780911.1| ribose-5-phosphate isomerase A [Rhodopseudomonas palustris BisA53]
gi|123321200|sp|Q07Q53|RPIA_RHOP5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|115517947|gb|ABJ05931.1| ribose-5-phosphate isomerase [Rhodopseudomonas palustris BisA53]
Length = 241
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 105/232 (45%), Positives = 152/232 (65%), Gaps = 2/232 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + ++KR AA A++ V DGM LG+GTGSTAK F+ LL K+ G +V +P+S T
Sbjct: 1 MSSDELKRQAAAVALEQVRDGMKLGLGTGSTAKHFVELLGAKVQGGLQVVGVPTSEVTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + ++V +DL++DG DEID L L+KG GGALLREKI+A A+ R IVI D
Sbjct: 61 DAERCGIPLATLDEVDHLDLTVDGADEIDPALNLVKGGGGALLREKIVAAASGRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
+SK V+ LGR LPIE+ FG+ T A+++ + G++ EL+LR G FV+DGG++
Sbjct: 121 DSKLVETLGRFPLPIEVIPFGLAATRRAIEQALAVCGIDGELKLRNGKDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA G IPD ++G L IPG++EHGLFI + ++ + G ++++
Sbjct: 181 IVDAHLGRIPDAPRLAGLLSVIPGIVEHGLFIGLASSVVLASPHG-IRIIER 231
>gi|222148536|ref|YP_002549493.1| ribose-5-phosphate isomerase A [Agrobacterium vitis S4]
gi|254808700|sp|B9JW57|RPIA_AGRVS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|221735522|gb|ACM36485.1| ribose 5-phosphate isomerase [Agrobacterium vitis S4]
Length = 232
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 117/228 (51%), Positives = 159/228 (69%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD QMK AA A+ YV +GM LG+GTGSTA+EF+ LLA+K+A+GF+VQ +P+S T
Sbjct: 1 MDVRQMKIKAAELALSYVENGMRLGIGTGSTAEEFVRLLAEKVADGFKVQGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ +DL++DG DE+D L LIKG GGALLREKI+A A+SR IVI D
Sbjct: 61 LCLELGVPLMSLDELPELDLTVDGADELDRHLTLIKGGGGALLREKIVAAASSRVIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K V+ LG LPIEI+ FG T ++++ A+ GL+ + LR +G LF++DGG+YI
Sbjct: 121 ETKLVETLGAYPLPIEINGFGGIATRISIEKAAAKLGLSGTIGLRMSGDDLFMTDGGHYI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD +S L IPGV+EHGLFI M A++ SDG ++
Sbjct: 181 LDASFGRIPDAVALSQALHAIPGVVEHGLFIGMASLAVVAGSDGARVI 228
>gi|159184838|ref|NP_354607.2| ribose-5-phosphate isomerase A [Agrobacterium tumefaciens str. C58]
gi|159140122|gb|AAK87392.2| ribose 5-phosphate isomerase [Agrobacterium tumefaciens str. C58]
Length = 226
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 113/219 (51%), Positives = 155/219 (70%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK AA A+ +V DGM LG+GTGSTA+EF+ LLA+K+A G +V+ +P+S T C
Sbjct: 1 MKIKAAEAALSHVQDGMRLGIGTGSTAEEFVRLLAEKVAAGLKVEGVPTSERTARLCVEL 60
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+PL S +++ +DL+IDG DE+D LRL+KG GGALLREKI+A A+ R IVI D+SK V
Sbjct: 61 GVPLKSLDELPELDLTIDGADEVDHVLRLVKGGGGALLREKIVAAASGRMIVIADQSKVV 120
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+ LG LPIEI+ FG T A++++A+ GL+ EL +R +G G F++DGG+ I+DA F
Sbjct: 121 ETLGAFPLPIEINPFGQVATRIAIEKLAARSGLSGELTMRSSGDGAFMTDGGHLILDASF 180
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G IPD + ++ EL IPGV+EHGLFIN+ AII +G
Sbjct: 181 GRIPDAEALARELNTIPGVVEHGLFINLASLAIIAGPEG 219
>gi|253573463|ref|ZP_04850806.1| ribose 5-phosphate isomerase A [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846991|gb|EES74996.1| ribose 5-phosphate isomerase A [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 138/227 (60%), Gaps = 5/227 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ A RA ++V DGMT+G+GTGSTA + + + + NG +++ I +S+ +E
Sbjct: 1 MNAKQAAGYRAAKWVKDGMTVGLGTGSTAYYAIEKIGEMVGNGLQIRAIATSKASEELAA 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+HIPL +DV +DL+IDG DE+D ++ LIKG GGALLREK++A + RFIVI D K
Sbjct: 61 KYHIPLIEAKDVDRLDLAIDGADEVDPQMALIKGGGGALLREKLVAINSDRFIVIADNGK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LGR LPIE+ F TL LK + +R G L+V+D GNYIVDA
Sbjct: 121 MVSTLGRFKLPIELVPFCYEWTLRELKSR-----YDVPFEMRMQGDQLYVTDNGNYIVDA 175
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
FG I DP +S EL + GV+EHGLF+ + +IG DG + +
Sbjct: 176 AFGQITDPARLSDELKAMTGVVEHGLFVGIAHTVVIGYEDGRTEIKE 222
>gi|146276932|ref|YP_001167091.1| ribose-5-phosphate isomerase A [Rhodobacter sphaeroides ATCC 17025]
gi|166229234|sp|A4WQX2|RPIA_RHOS5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|145555173|gb|ABP69786.1| ribose-5-phosphate isomerase [Rhodobacter sphaeroides ATCC 17025]
Length = 250
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
K AARRA+ +V DGM LG+GTGSTA + LA+++ G RVQ +P+S T
Sbjct: 9 DTAKFAAARRAVDFVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSSRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IP+ + ++ +DL+IDG DE DS LIKG G ALL+EKI+A A+ R IVI D +
Sbjct: 69 RELGIPVVTLDEARWLDLTIDGADEFDSEFNLIKGGGAALLQEKIVATASDRMIVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG T ++E L E+ LRR+G ++D NYI+
Sbjct: 129 KEVAQLGAFPLPVEVIPFGWQSTRMLIEEALIGLDVLGREVTLRRSGEAPLLTDEKNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I P+ ++ L I GV+E+GLFI++ D ++G DG V
Sbjct: 189 DLHLTRIGHPRQLALTLNQIAGVVENGLFIDICDTVVVGHGDGRVTVRD 237
>gi|26249330|ref|NP_755370.1| ribose-5-phosphate isomerase A [Escherichia coli CFT073]
gi|91212293|ref|YP_542279.1| ribose-5-phosphate isomerase A [Escherichia coli UTI89]
gi|237706438|ref|ZP_04536919.1| ribose-5-phosphate isomerase A [Escherichia sp. 3_2_53FAA]
gi|254037961|ref|ZP_04872019.1| ribose-5-phosphate isomerase A [Escherichia sp. 1_1_43]
gi|332280398|ref|ZP_08392811.1| ribose-5-phosphate isomerase A [Shigella sp. D9]
gi|26109738|gb|AAN81943.1|AE016766_31 Ribose 5-phosphate isomerase A [Escherichia coli CFT073]
gi|91073867|gb|ABE08748.1| ribose-5-phosphate isomerase, constitutive [Escherichia coli UTI89]
gi|226839585|gb|EEH71606.1| ribose-5-phosphate isomerase A [Escherichia sp. 1_1_43]
gi|226899478|gb|EEH85737.1| ribose-5-phosphate isomerase A [Escherichia sp. 3_2_53FAA]
gi|332102750|gb|EGJ06096.1| ribose-5-phosphate isomerase A [Shigella sp. D9]
Length = 243
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 25 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 82
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 83 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 142
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 143 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 192
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 193 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 243
>gi|153009422|ref|YP_001370637.1| ribose-5-phosphate isomerase A [Ochrobactrum anthropi ATCC 49188]
gi|151561310|gb|ABS14808.1| ribose 5-phosphate isomerase [Ochrobactrum anthropi ATCC 49188]
Length = 232
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 114/232 (49%), Positives = 159/232 (68%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ +V DGM LG+GTGSTA+EF+ LLADK++NGF++ +P+S T
Sbjct: 1 MDEARKLKIAAAAEALTHVKDGMRLGIGTGSTAEEFVRLLADKVSNGFKIIGVPTSERTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
CK +PL + ++ +DL++DG DE+D+ L LIKG GGALLREKI+A A+ IVI
Sbjct: 61 KLCKELGVPLTTLDETPHLDLTVDGADEVDTNLSLIKGGGGALLREKIVAAASDAMIVIA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK V+ LGR LP+E+++FG+ T+ A++E A+ GL L LR FV+DGG+Y
Sbjct: 121 DSSKVVETLGRFPLPVEVNRFGLGATMRAIEEAAAKCGLAGPLALRLKDGSPFVTDGGHY 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + A++ +DG + +
Sbjct: 181 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIGLARAAVVAGNDG-IRTMNR 231
>gi|239831985|ref|ZP_04680314.1| ribose 5-phosphate isomerase A [Ochrobactrum intermedium LMG 3301]
gi|239824252|gb|EEQ95820.1| ribose 5-phosphate isomerase A [Ochrobactrum intermedium LMG 3301]
Length = 257
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 112/232 (48%), Positives = 157/232 (67%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ +V DGM LG+GTGSTA+EF+ LLA+K++ GF++ +P+S T
Sbjct: 26 MDEARKLKIAAAAEALTHVKDGMRLGIGTGSTAEEFVRLLAEKVSGGFKIIGVPTSERTA 85
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C+ +PL + ++ +DL++DG DE+D+ L LIKG GGALLREKI+A A+ IVI
Sbjct: 86 KLCEELGVPLTTLDETPHLDLTVDGADEVDTNLSLIKGGGGALLREKIVAAASDAMIVIA 145
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK V+ LGR LP+E+++FG+ T A++E A+ GL L LR FV+DGG+Y
Sbjct: 146 DSSKVVETLGRFPLPVEVNRFGLGATFRAIEEAAAKCGLAGPLALRLKDGSPFVTDGGHY 205
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + A+I +DG + +
Sbjct: 206 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIGLARAAVIAGNDG-IRTMNR 256
>gi|315648208|ref|ZP_07901309.1| ribose 5-phosphate isomerase [Paenibacillus vortex V453]
gi|315276854|gb|EFU40197.1| ribose 5-phosphate isomerase [Paenibacillus vortex V453]
Length = 238
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 134/228 (58%), Gaps = 5/228 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ MK+ AA A +YV DGM +G+GTGSTA ++ + + + G +Q + +S +E
Sbjct: 3 NEKNMKKIAAEHAAKYVQDGMRIGLGTGSTAYYAILKIGEMVRGGLNIQAVATSEASERL 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
I L + + +DL+IDG DE+D RLRLIKG GGALLREKI A+ + R +++ DE
Sbjct: 63 AVEQGISLTPVQHMDRLDLTIDGADELDDRLRLIKGGGGALLREKITAYQSDRLVIVADE 122
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K+V LG LP+EI F T + + G + ++R R G +V+D GNYI
Sbjct: 123 VKQVTQLGAFPLPVEIVPFAYEWT----VQSLARLGCSVQIR-RNLSEGFYVTDNGNYIA 177
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
D F I P+ +S L +IPGV+EHGLFI M D AIIG DG +L
Sbjct: 178 DCKFQLITHPEELSMRLGSIPGVVEHGLFIGMADQAIIGCQDGTVRIL 225
>gi|225627488|ref|ZP_03785525.1| ribose 5-phosphate isomerase A [Brucella ceti str. Cudo]
gi|225617493|gb|EEH14538.1| ribose 5-phosphate isomerase A [Brucella ceti str. Cudo]
Length = 244
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 154/232 (66%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ YV DGM LG+GTGSTA+EF+ LLA+K+ GFRV +P+S T
Sbjct: 13 MDEARKLKIAAAAEALTYVKDGMRLGIGTGSTAEEFVRLLAEKVKGGFRVIGVPTSERTA 72
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C+ + L + E+ +DL+IDG DE+D L LIKG GGALLREKI+A A+ IVI
Sbjct: 73 KLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALLREKIVAAASDSMIVIA 132
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V+ LGR LPIE+++FG+ T+ A++ A GL L LR F++DGG+Y
Sbjct: 133 DQSKVVETLGRFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHY 192
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + AII +DG + +
Sbjct: 193 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIGLARAAIIAGTDG-IRTMNR 243
>gi|323960790|gb|EGB56411.1| ribose 5-phosphate isomerase A [Escherichia coli H489]
Length = 219
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGLIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 169 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|99081800|ref|YP_613954.1| ribose-5-phosphate isomerase A [Ruegeria sp. TM1040]
gi|123077553|sp|Q1GF74|RPIA_SILST RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|99038080|gb|ABF64692.1| ribose-5-phosphate isomerase [Ruegeria sp. TM1040]
Length = 262
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA + V DGM +G+GTGSTA + L + + G ++ +P+S T
Sbjct: 9 DKAKFVAAKRAAELVEDGMRVGLGTGSTAAWLVRCLGEMVREDGLKITGVPTSARTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I L + ++ +DL+IDG DE DS L LIKG GGALL+EKI+A A+ + +VI D++
Sbjct: 69 REVGIELITLDEARWLDLTIDGADEFDSELNLIKGGGGALLQEKIVATASDQMVVIADKA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG + + ++E + LR NG+ +V+D GN+I+
Sbjct: 129 KEVETLGAFPLPIEVIPFGWQTSQALVEETLISMDVMGRSSTLRMNGASPYVTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ ++ L IPGV+E+GLFI++ D +IG DG+ V
Sbjct: 189 DLHLNRIGNPRQLALVLNQIPGVVENGLFIDICDTVVIGYGDGKVEVRD 237
>gi|238896459|ref|YP_002921197.1| ribose-5-phosphate isomerase A [Klebsiella pneumoniae NTUH-K2044]
gi|238548779|dbj|BAH65130.1| ribose-5-phosphate isomerase A [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 245
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 27 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 84
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 85 KLKSLGITVFDLNSVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 144
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 145 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 194
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 195 LDVHGLEILDAIALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 245
>gi|292490667|ref|YP_003526106.1| ribose 5-phosphate isomerase [Nitrosococcus halophilus Nc4]
gi|291579262|gb|ADE13719.1| ribose 5-phosphate isomerase [Nitrosococcus halophilus Nc4]
Length = 220
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA+ A++YV G +G+GTGST F+ LL + + V S +TE
Sbjct: 1 MSPDEMKKLAAKAALEYVEPGAVIGIGTGSTVNHFIELLG-TVKSKIDGAVSSSEASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +IP++ V + L +DG DE + L+LIKG GGAL REKIIA A+ +F+ I D
Sbjct: 60 LKAL-NIPVYDLNAVGEIPLYVDGADESNHYLQLIKGGGGALTREKIIASASRKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK VD LG LP+E+ + + + G R FV+D GN I
Sbjct: 119 QSKLVDILGDFPLPVEVIPMARSHIARQIVK----LGGEPVYREG------FVTDNGNQI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
+D I +P + G+L NIPGV+ +GLF I+ D I+GT +G V K
Sbjct: 169 LDIHGLSIMEPAKLEGQLNNIPGVVTNGLFAIDPADVLILGTPEGANTVYSK 220
>gi|306843884|ref|ZP_07476479.1| ribose 5-phosphate isomerase A [Brucella sp. BO1]
gi|306275639|gb|EFM57363.1| ribose 5-phosphate isomerase A [Brucella sp. BO1]
Length = 232
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 154/232 (66%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ YV DGM LG+GTGSTA+EF+ LLA+K+ GFRV +P+S T
Sbjct: 1 MDEARKLKIAAAAEALTYVKDGMRLGIGTGSTAEEFVRLLAEKVKGGFRVIGVPTSERTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C+ + L + E+ +DL+IDG DE+D L LIKG GGALLREKI+A A+ IVI
Sbjct: 61 KLCEELGVALTTLEETPHLDLTIDGADEVDRELSLIKGGGGALLREKIVAAASDSMIVIA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V+ LGR LPIE+++FG+ T+ A++ A GL L LR F++DGG+Y
Sbjct: 121 DQSKVVETLGRFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHY 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + AII +DG + +
Sbjct: 181 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIGLARAAIIAGTDG-IRTMNR 231
>gi|319783574|ref|YP_004143050.1| ribose 5-phosphate isomerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169462|gb|ADV13000.1| ribose 5-phosphate isomerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 243
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 151/228 (66%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA Q+K AAR A+ +V DGM LG+GTG+TA+EF+ LLA+K+A G + +P+S T
Sbjct: 1 MDARQLKVEAARAALAHVSDGMRLGIGTGTTAEEFVRLLAEKVATGMAIIGVPTSERTAL 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ +PL + E+ +DL++DG DE+D L L+KG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCRELGVPLSTLEETPELDLTVDGADEVDPELTLVKGGGGALLREKIVAAASQRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ LGR LPIE++ FG+ T A+ A GL+ + LR G FV+DGG++I
Sbjct: 121 RSKMVETLGRFPLPIEVNPFGLRATEIAVAAAAEKLGLSGPVTLRMTGGQAFVTDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S L IPGV+EHGLFI + AII DG V
Sbjct: 181 LDASFGRIPDTRALSNALHAIPGVVEHGLFIGLASAAIIAGGDGIQTV 228
>gi|209549606|ref|YP_002281523.1| ribose-5-phosphate isomerase A [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|238057752|sp|B5ZRL6|RPIA_RHILW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|209535362|gb|ACI55297.1| ribose 5-phosphate isomerase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 232
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 123/228 (53%), Positives = 164/228 (71%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +MK AA A+ +V DGM LG+GTGSTA+EF+ LLA+K+A+GF+V+ +P+S T
Sbjct: 1 MDAREMKIKAAAAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVASGFKVEGVPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C +PL S +++ ++DL+IDG DE+D LRLIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCVELGVPLKSLDELPALDLTIDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LPIE++ FG+ T A+++VA+ GL EL LR++G G F +DGG++I
Sbjct: 121 ESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLAGELSLRQSGDGEFTTDGGHHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 181 IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 228
>gi|23501890|ref|NP_698017.1| ribose-5-phosphate isomerase A [Brucella suis 1330]
gi|161618962|ref|YP_001592849.1| ribose-5-phosphate isomerase A [Brucella canis ATCC 23365]
gi|163843278|ref|YP_001627682.1| ribose-5-phosphate isomerase A [Brucella suis ATCC 23445]
gi|254701761|ref|ZP_05163589.1| ribose-5-phosphate isomerase A [Brucella suis bv. 5 str. 513]
gi|254704302|ref|ZP_05166130.1| ribose-5-phosphate isomerase A [Brucella suis bv. 3 str. 686]
gi|254706796|ref|ZP_05168624.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis M163/99/10]
gi|254710094|ref|ZP_05171905.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis B2/94]
gi|254714095|ref|ZP_05175906.1| ribose-5-phosphate isomerase A [Brucella ceti M644/93/1]
gi|254716848|ref|ZP_05178659.1| ribose-5-phosphate isomerase A [Brucella ceti M13/05/1]
gi|254719086|ref|ZP_05180897.1| ribose-5-phosphate isomerase A [Brucella sp. 83/13]
gi|256031590|ref|ZP_05445204.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis M292/94/1]
gi|256061100|ref|ZP_05451255.1| ribose-5-phosphate isomerase A [Brucella neotomae 5K33]
gi|256159728|ref|ZP_05457475.1| ribose-5-phosphate isomerase A [Brucella ceti M490/95/1]
gi|256254991|ref|ZP_05460527.1| ribose-5-phosphate isomerase A [Brucella ceti B1/94]
gi|256369433|ref|YP_003106941.1| ribose-5-phosphate isomerase A [Brucella microti CCM 4915]
gi|260168720|ref|ZP_05755531.1| ribose-5-phosphate isomerase A [Brucella sp. F5/99]
gi|260566451|ref|ZP_05836921.1| ribose-5-phosphate isomerase A [Brucella suis bv. 4 str. 40]
gi|261218650|ref|ZP_05932931.1| ribose-5-phosphate isomerase A [Brucella ceti M13/05/1]
gi|261222178|ref|ZP_05936459.1| ribose-5-phosphate isomerase A [Brucella ceti B1/94]
gi|261314263|ref|ZP_05953460.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis M163/99/10]
gi|261317643|ref|ZP_05956840.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis B2/94]
gi|261321852|ref|ZP_05961049.1| ribose-5-phosphate isomerase A [Brucella ceti M644/93/1]
gi|261325102|ref|ZP_05964299.1| ribose-5-phosphate isomerase A [Brucella neotomae 5K33]
gi|261752313|ref|ZP_05996022.1| ribose-5-phosphate isomerase A [Brucella suis bv. 5 str. 513]
gi|261754970|ref|ZP_05998679.1| ribose-5-phosphate isomerase A [Brucella suis bv. 3 str. 686]
gi|261758197|ref|ZP_06001906.1| ribose-5-phosphate isomerase A [Brucella sp. F5/99]
gi|265984076|ref|ZP_06096811.1| ribose-5-phosphate isomerase A [Brucella sp. 83/13]
gi|265988678|ref|ZP_06101235.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis M292/94/1]
gi|265998142|ref|ZP_06110699.1| ribose-5-phosphate isomerase A [Brucella ceti M490/95/1]
gi|294852400|ref|ZP_06793073.1| ribose 5-phosphate isomerase A [Brucella sp. NVSL 07-0026]
gi|306838370|ref|ZP_07471215.1| ribose 5-phosphate isomerase A [Brucella sp. NF 2653]
gi|306840497|ref|ZP_07473256.1| ribose 5-phosphate isomerase A [Brucella sp. BO2]
gi|30173311|sp|Q8G0S7|RPIA_BRUSU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|23347830|gb|AAN29932.1| ribose 5-phosphate isomerase A [Brucella suis 1330]
gi|161335773|gb|ABX62078.1| ribose 5-phosphate isomerase A [Brucella canis ATCC 23365]
gi|163674001|gb|ABY38112.1| ribose 5-phosphate isomerase A [Brucella suis ATCC 23445]
gi|255999593|gb|ACU47992.1| ribose-5-phosphate isomerase A [Brucella microti CCM 4915]
gi|260155969|gb|EEW91049.1| ribose-5-phosphate isomerase A [Brucella suis bv. 4 str. 40]
gi|260920762|gb|EEX87415.1| ribose-5-phosphate isomerase A [Brucella ceti B1/94]
gi|260923739|gb|EEX90307.1| ribose-5-phosphate isomerase A [Brucella ceti M13/05/1]
gi|261294542|gb|EEX98038.1| ribose-5-phosphate isomerase A [Brucella ceti M644/93/1]
gi|261296866|gb|EEY00363.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis B2/94]
gi|261301082|gb|EEY04579.1| ribose-5-phosphate isomerase A [Brucella neotomae 5K33]
gi|261303289|gb|EEY06786.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis M163/99/10]
gi|261738181|gb|EEY26177.1| ribose-5-phosphate isomerase A [Brucella sp. F5/99]
gi|261742066|gb|EEY29992.1| ribose-5-phosphate isomerase A [Brucella suis bv. 5 str. 513]
gi|261744723|gb|EEY32649.1| ribose-5-phosphate isomerase A [Brucella suis bv. 3 str. 686]
gi|262552610|gb|EEZ08600.1| ribose-5-phosphate isomerase A [Brucella ceti M490/95/1]
gi|264660875|gb|EEZ31136.1| ribose-5-phosphate isomerase A [Brucella pinnipedialis M292/94/1]
gi|264662668|gb|EEZ32929.1| ribose-5-phosphate isomerase A [Brucella sp. 83/13]
gi|294820989|gb|EFG37988.1| ribose 5-phosphate isomerase A [Brucella sp. NVSL 07-0026]
gi|306289512|gb|EFM60730.1| ribose 5-phosphate isomerase A [Brucella sp. BO2]
gi|306406510|gb|EFM62744.1| ribose 5-phosphate isomerase A [Brucella sp. NF 2653]
Length = 232
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 154/232 (66%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ YV DGM LG+GTGSTA+EF+ LLA+K+ GFRV +P+S T
Sbjct: 1 MDEARKLKIAAAAEALTYVKDGMRLGIGTGSTAEEFVRLLAEKVKGGFRVIGVPTSERTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C+ + L + E+ +DL+IDG DE+D L LIKG GGALLREKI+A A+ IVI
Sbjct: 61 KLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALLREKIVAAASDSMIVIA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V+ LGR LPIE+++FG+ T+ A++ A GL L LR F++DGG+Y
Sbjct: 121 DQSKVVETLGRFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHY 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + AII +DG + +
Sbjct: 181 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIGLARAAIIAGTDG-IRTMNR 231
>gi|259416967|ref|ZP_05740887.1| ribose 5-phosphate isomerase A [Silicibacter sp. TrichCH4B]
gi|259348406|gb|EEW60183.1| ribose 5-phosphate isomerase A [Silicibacter sp. TrichCH4B]
Length = 262
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA + V DGM +G+GTGSTA + L + + G ++ +P+S T
Sbjct: 9 DKAKFVAAKRAAELVEDGMRVGLGTGSTAAWLVRCLGEMVREDGLKITGVPTSARTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D++
Sbjct: 69 REVGIEVITLDEARWLDLTIDGADEFDGDLNLIKGGGGALLQEKIVATASDQMVVIADKA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG + + ++E + LR NG+ +V+D GN+I+
Sbjct: 129 KEVEMLGAFPLPIEVIPFGWQTSQALVEETLISMDVMGRSSTLRMNGASPYVTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ ++ L IPGV+E+GLFI++ D +IG DG+ V
Sbjct: 189 DLHLNRIGNPRQLALVLNQIPGVVENGLFIDICDTVVIGYGDGKVEVRD 237
>gi|330011878|ref|ZP_08307179.1| ribose 5-phosphate isomerase A [Klebsiella sp. MS 92-3]
gi|328534057|gb|EGF60704.1| ribose 5-phosphate isomerase A [Klebsiella sp. MS 92-3]
Length = 234
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 16 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 73
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 74 KLKSLGITVFDLNSVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 133
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 134 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 183
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 184 LDVHGLEILDAIALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 234
>gi|161506390|ref|YP_001573502.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189043824|sp|A9MRG2|RPIA_SALAR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|160867737|gb|ABX24360.1| hypothetical protein SARI_04587 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 219
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKGLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 169 LDVYGMEILDPIALENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|188494875|ref|ZP_03002145.1| ribose 5-phosphate isomerase A [Escherichia coli 53638]
gi|188490074|gb|EDU65177.1| ribose 5-phosphate isomerase A [Escherichia coli 53638]
Length = 219
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLSIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 169 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|16761844|ref|NP_457461.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766364|ref|NP_461979.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29143331|ref|NP_806673.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415009|ref|YP_152084.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62181574|ref|YP_217991.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161616017|ref|YP_001589982.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|197363938|ref|YP_002143575.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205353987|ref|YP_002227788.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858326|ref|YP_002244977.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213162872|ref|ZP_03348582.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427298|ref|ZP_03360048.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213613186|ref|ZP_03371012.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213646130|ref|ZP_03376183.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213864991|ref|ZP_03387110.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224584854|ref|YP_002638652.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238909863|ref|ZP_04653700.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289830213|ref|ZP_06547597.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|54039267|sp|P66693|RPIA_SALTI RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|54042181|sp|P66692|RPIA_SALTY RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|67461316|sp|Q5PJH1|RPIA_SALPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|75480976|sp|Q57K52|RPIA_SALCH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|189043825|sp|A9N3P6|RPIA_SALPB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238690413|sp|B5QXJ0|RPIA_SALEP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238690520|sp|B5RE24|RPIA_SALG2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238690723|sp|B5BFM8|RPIA_SALPK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808718|sp|C0PY37|RPIA_SALPC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|25329425|pir||AE0874 ribose 5-phosphate isomerase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16421615|gb|AAL21938.1| constitutive ribosephosphate isomerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504146|emb|CAD02893.1| ribose 5-phosphate isomerase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138965|gb|AAO70533.1| ribose 5-phosphate isomerase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129266|gb|AAV78772.1| ribose 5-phosphate isomerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62129207|gb|AAX66910.1| ribosephosphate isomerase, constitutive [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161365381|gb|ABX69149.1| hypothetical protein SPAB_03818 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197095415|emb|CAR60974.1| ribose 5-phosphate isomerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205273768|emb|CAR38763.1| Ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206710129|emb|CAR34484.1| Ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469381|gb|ACN47211.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248195|emb|CBG26031.1| PRI [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267995223|gb|ACY90108.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159619|emb|CBW19138.1| Ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914085|dbj|BAJ38059.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320087495|emb|CBY97260.1| ribosephosphate isomerase, constitutive [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321225739|gb|EFX50793.1| Ribose 5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613462|gb|EFY10403.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621054|gb|EFY17912.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624118|gb|EFY20952.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628143|gb|EFY24932.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633262|gb|EFY30004.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636160|gb|EFY32868.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322639498|gb|EFY36186.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647569|gb|EFY44058.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648753|gb|EFY45200.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653808|gb|EFY50134.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657914|gb|EFY54182.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664017|gb|EFY60216.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668972|gb|EFY65123.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673034|gb|EFY69141.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322677975|gb|EFY74038.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681151|gb|EFY77184.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322687919|gb|EFY83886.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322716055|gb|EFZ07626.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323131419|gb|ADX18849.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194885|gb|EFZ80072.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196636|gb|EFZ81784.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202664|gb|EFZ87704.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207849|gb|EFZ92795.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212599|gb|EFZ97416.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214918|gb|EFZ99666.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222648|gb|EGA07013.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225072|gb|EGA09324.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230594|gb|EGA14712.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235055|gb|EGA19141.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239094|gb|EGA23144.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244548|gb|EGA28554.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247163|gb|EGA31129.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253354|gb|EGA37183.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256339|gb|EGA40075.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262485|gb|EGA46041.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267419|gb|EGA50903.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269177|gb|EGA52632.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326624810|gb|EGE31155.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326629100|gb|EGE35443.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332989930|gb|AEF08913.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 219
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKGLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 169 LDVYGMEILDPIALENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|157148454|ref|YP_001455773.1| ribose-5-phosphate isomerase A [Citrobacter koseri ATCC BAA-895]
gi|157085659|gb|ABV15337.1| hypothetical protein CKO_04280 [Citrobacter koseri ATCC BAA-895]
Length = 231
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 71 KLKSLGITVFDLNEVDSLGVYVDGADEINGHMQMIKGGGAALTREKIIASVAKKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 131 ASKEVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + I DP + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 181 LDVYGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTADGVKTIVK 231
>gi|256848169|ref|ZP_05553613.1| ribose 5-phosphate isomerase A [Lactobacillus coleohominis
101-4-CHN]
gi|256715229|gb|EEU30206.1| ribose 5-phosphate isomerase A [Lactobacillus coleohominis
101-4-CHN]
Length = 227
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/225 (33%), Positives = 126/225 (56%), Gaps = 7/225 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K ++ A++Y+ DGM +G+GTGST + + L +++ G ++ + +S T
Sbjct: 1 MDQNELKAQVSKEAVKYIQDGMIVGLGTGSTVRYMVDALGERVKNEGLKIIGVTTSNRTT 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + +DV +DL IDG DE+D IKG GGALL EKI+ +A+++ I I
Sbjct: 61 KQAESLGITIKDIDDVDHIDLCIDGADEVDDDFNGIKGGGGALLWEKIVNNASTKKIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V +G +P+E+ FG + ++ + R +G + +D N+
Sbjct: 121 DQSKLVPRIGDFGVPVEVIPFGSQHVFNTFEKKGY------KPVWRMDGDHKYRTDENNF 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I DP ++ +L + GV+EHGLF+N VD I+G +G
Sbjct: 175 IIDIHLGQIDDPHALAEDLIHTVGVVEHGLFLNRVDDVIVGRDNG 219
>gi|90417931|ref|ZP_01225843.1| ribose-5-phosphate isomerase A [Aurantimonas manganoxydans
SI85-9A1]
gi|90337603|gb|EAS51254.1| ribose-5-phosphate isomerase A [Aurantimonas manganoxydans
SI85-9A1]
Length = 231
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 149/223 (66%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
D+ +K A A+ +V DGM LG+GTGSTA+ F+ +LA+++ +G ++ + +S TE
Sbjct: 3 DSATLKTMAGEAALAHVEDGMRLGIGTGSTAEAFVRVLAERVRDGMKIVGVTTSNRTETL 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
C +P + E V +DL+IDG DE+D LRLIKG GGALLREKI+A A+ RF+VI D
Sbjct: 63 CAELGVPTETLETVPELDLTIDGADEVDGSLRLIKGGGGALLREKIVAAASERFLVIADA 122
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LPIEI+ FG+ T A+++ A+ GL ++ LRR+G F++D G+ I+
Sbjct: 123 SKKVETLGAFPLPIEINGFGMIATYLAIRKAAAGLGLEGDMILRRSGDEPFITDNGHLIL 182
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
DA FG I DP+ +S L +PGV+EHGLF+ M + I+ DG
Sbjct: 183 DASFGRIGDPEALSQALFAVPGVVEHGLFLGMANTVILAGDDG 225
>gi|57641361|ref|YP_183839.1| ribose-5-phosphate isomerase A [Thermococcus kodakarensis KOD1]
gi|67461267|sp|Q5JH26|RPIA_PYRKO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|57159685|dbj|BAD85615.1| ribose 5-phosphate isomerase [Thermococcus kodakarensis KOD1]
Length = 229
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 7/230 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
M+ +MK+ A+ A++++ D M +G+GTGST F+ L + G V +P+S
Sbjct: 1 MNVEEMKKAVAKEALKFIEDEMVVGLGTGSTTAYFINYLGKLLMEGELEDVYGVPTSHQA 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
IP+ S ++V ++D+++DG DE+D + LIKG G AL EKII + A FIV+
Sbjct: 61 RLLALEAGIPVVSLDEVDAIDIAVDGADEVDPHMNLIKGRGAALTMEKIIEYRAGMFIVL 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V+ + +PIE+ A+ E F ELR+ G V+D G
Sbjct: 121 VDESKLVEYLGQKMPVPIEVIPAAW----RAIAEELEVFNATAELRMAVKKDGPVVTDNG 176
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
N+I+DA F I DP + EL IPGV+E+G+F ++ D ++GT +G
Sbjct: 177 NFILDAKFARIEDPLDLEIELNTIPGVVENGIFADIADIILVGTPEGVKR 226
>gi|315231933|ref|YP_004072369.1| ribose 5-phosphate isomerase A [Thermococcus barophilus MP]
gi|315184961|gb|ADT85146.1| ribose 5-phosphate isomerase A [Thermococcus barophilus MP]
Length = 229
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSSRNT 58
M+ +MK+ A+ A++Y+ D M +G+GTGST F+ +L I F V +P+S
Sbjct: 1 MNTEEMKKLVAKEALKYIEDDMIVGLGTGSTTAYFIKMLGKMIMNEELFDVYGLPTSYQA 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+P+ S ++V ++D+++DG DE+D L LIKG G AL EKII + A F+V+
Sbjct: 61 RILALESGVPVVSLDEVDAIDIAVDGADEVDPHLNLIKGRGAALTMEKIIEYRAGTFLVL 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D SK V+ + +PIE+ +KE F ELR+ G V+D G
Sbjct: 121 VDGSKLVEYLGQKMPVPIEVIPAAW----RVIKEELEVFNATAELRMGVKKDGPVVTDNG 176
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N+I+DA F I DP + EL NIPGV+E+G+F ++ D ++GT +G +
Sbjct: 177 NFILDAKFERIEDPLDLEIELNNIPGVVENGIFADIADIVLVGTKEGVKKL 227
>gi|15803449|ref|NP_289482.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H7 EDL933]
gi|15833039|ref|NP_311812.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H7 str.
Sakai]
gi|16130815|ref|NP_417389.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli str.
K-12 substr. MG1655]
gi|30064224|ref|NP_838395.1| ribose-5-phosphate isomerase A [Shigella flexneri 2a str. 2457T]
gi|56480200|ref|NP_708676.2| ribose-5-phosphate isomerase A [Shigella flexneri 2a str. 301]
gi|74313471|ref|YP_311890.1| ribose-5-phosphate isomerase A [Shigella sonnei Ss046]
gi|82545465|ref|YP_409412.1| ribose-5-phosphate isomerase A [Shigella boydii Sb227]
gi|82778322|ref|YP_404671.1| ribose-5-phosphate isomerase A [Shigella dysenteriae Sd197]
gi|89109692|ref|AP_003472.1| ribosephosphate isomerase, constitutive [Escherichia coli str. K-12
substr. W3110]
gi|110806815|ref|YP_690335.1| ribose-5-phosphate isomerase A [Shigella flexneri 5 str. 8401]
gi|157154730|ref|YP_001464252.1| ribose-5-phosphate isomerase A [Escherichia coli E24377A]
gi|157162373|ref|YP_001459691.1| ribose-5-phosphate isomerase A [Escherichia coli HS]
gi|168747603|ref|ZP_02772625.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4113]
gi|168753856|ref|ZP_02778863.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4401]
gi|168760046|ref|ZP_02785053.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4501]
gi|168766911|ref|ZP_02791918.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4486]
gi|168773456|ref|ZP_02798463.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4196]
gi|168781763|ref|ZP_02806770.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4076]
gi|168785764|ref|ZP_02810771.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC869]
gi|168797479|ref|ZP_02822486.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC508]
gi|170018841|ref|YP_001723795.1| ribose-5-phosphate isomerase A [Escherichia coli ATCC 8739]
gi|170082473|ref|YP_001731793.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli str.
K-12 substr. DH10B]
gi|170684222|ref|YP_001745067.1| ribose-5-phosphate isomerase A [Escherichia coli SMS-3-5]
gi|187730970|ref|YP_001881683.1| ribose-5-phosphate isomerase A [Shigella boydii CDC 3083-94]
gi|191168214|ref|ZP_03030009.1| ribose 5-phosphate isomerase A [Escherichia coli B7A]
gi|193063514|ref|ZP_03044603.1| ribose 5-phosphate isomerase A [Escherichia coli E22]
gi|193067384|ref|ZP_03048352.1| ribose 5-phosphate isomerase A [Escherichia coli E110019]
gi|194426239|ref|ZP_03058794.1| ribose 5-phosphate isomerase A [Escherichia coli B171]
gi|194436714|ref|ZP_03068814.1| ribose 5-phosphate isomerase A [Escherichia coli 101-1]
gi|195936532|ref|ZP_03081914.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4024]
gi|208808380|ref|ZP_03250717.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4206]
gi|208813802|ref|ZP_03255131.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4045]
gi|208819067|ref|ZP_03259387.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4042]
gi|209399759|ref|YP_002272390.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4115]
gi|209920367|ref|YP_002294451.1| ribose-5-phosphate isomerase A [Escherichia coli SE11]
gi|215488212|ref|YP_002330643.1| ribose-5-phosphate isomerase A [Escherichia coli O127:H6 str.
E2348/69]
gi|217327099|ref|ZP_03443182.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
TW14588]
gi|218555462|ref|YP_002388375.1| ribose-5-phosphate isomerase A [Escherichia coli IAI1]
gi|218559905|ref|YP_002392818.1| ribose-5-phosphate isomerase A [Escherichia coli S88]
gi|218691037|ref|YP_002399249.1| ribose-5-phosphate isomerase A [Escherichia coli ED1a]
gi|218696509|ref|YP_002404176.1| ribose-5-phosphate isomerase A [Escherichia coli 55989]
gi|218701621|ref|YP_002409250.1| ribose-5-phosphate isomerase A [Escherichia coli IAI39]
gi|218706418|ref|YP_002413937.1| ribose-5-phosphate isomerase A [Escherichia coli UMN026]
gi|238902038|ref|YP_002927834.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli
BW2952]
gi|253772246|ref|YP_003035077.1| ribose-5-phosphate isomerase A [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162825|ref|YP_003045933.1| ribose-5-phosphate isomerase A [Escherichia coli B str. REL606]
gi|254794863|ref|YP_003079700.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H7 str.
TW14359]
gi|256019288|ref|ZP_05433153.1| ribose-5-phosphate isomerase A [Shigella sp. D9]
gi|256024576|ref|ZP_05438441.1| ribose-5-phosphate isomerase A [Escherichia sp. 4_1_40B]
gi|260845582|ref|YP_003223360.1| ribose 5-phosphate isomerase RpiA, constitutive [Escherichia coli
O103:H2 str. 12009]
gi|260857036|ref|YP_003230927.1| ribose 5-phosphate isomerase RpiA, constitutive [Escherichia coli
O26:H11 str. 11368]
gi|260869590|ref|YP_003235992.1| ribose 5-phosphate isomerase RpiA, constitutive [Escherichia coli
O111:H- str. 11128]
gi|261226225|ref|ZP_05940506.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256520|ref|ZP_05949053.1| ribose 5-phosphate isomerase RpiA, constitutive [Escherichia coli
O157:H7 str. FRIK966]
gi|291284232|ref|YP_003501050.1| Ribose 5-phosphate isomerase [Escherichia coli O55:H7 str. CB9615]
gi|293406412|ref|ZP_06650338.1| ribose-5-phosphate isomerase A [Escherichia coli FVEC1412]
gi|293412272|ref|ZP_06654995.1| ribose 5-phosphate isomerase A [Escherichia coli B354]
gi|293416167|ref|ZP_06658807.1| ribose 5-phosphate isomerase A [Escherichia coli B185]
gi|293449236|ref|ZP_06663657.1| ribose 5-phosphate isomerase A [Escherichia coli B088]
gi|298382148|ref|ZP_06991745.1| ribose 5-phosphate isomerase A [Escherichia coli FVEC1302]
gi|301027785|ref|ZP_07191091.1| ribose 5-phosphate isomerase A [Escherichia coli MS 196-1]
gi|306812185|ref|ZP_07446383.1| ribose-5-phosphate isomerase A [Escherichia coli NC101]
gi|307139601|ref|ZP_07498957.1| ribose-5-phosphate isomerase A [Escherichia coli H736]
gi|307310468|ref|ZP_07590116.1| ribose 5-phosphate isomerase [Escherichia coli W]
gi|309785276|ref|ZP_07679907.1| ribose 5-phosphate isomerase A [Shigella dysenteriae 1617]
gi|312964825|ref|ZP_07779065.1| ribose 5-phosphate isomerase A [Escherichia coli 2362-75]
gi|312972845|ref|ZP_07787018.1| ribose 5-phosphate isomerase A [Escherichia coli 1827-70]
gi|331659042|ref|ZP_08359984.1| ribose 5-phosphate isomerase A [Escherichia coli TA206]
gi|331664488|ref|ZP_08365394.1| ribose 5-phosphate isomerase A [Escherichia coli TA143]
gi|331669650|ref|ZP_08370496.1| ribose 5-phosphate isomerase A [Escherichia coli TA271]
gi|331684540|ref|ZP_08385132.1| ribose 5-phosphate isomerase A [Escherichia coli H299]
gi|67472380|sp|P0A7Z0|RPIA_ECOLI RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|67472381|sp|P0A7Z1|RPIA_ECOL6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|67472382|sp|P0A7Z2|RPIA_ECO57 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|67472383|sp|P0A7Z3|RPIA_SHIFL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|122957222|sp|Q0T0Y5|RPIA_SHIF8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123558649|sp|Q31WH4|RPIA_SHIBS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123561631|sp|Q32BX5|RPIA_SHIDS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123616229|sp|Q3YXV7|RPIA_SHISS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166991516|sp|A7ZR23|RPIA_ECO24 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166991517|sp|A8A454|RPIA_ECOHS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|189043815|sp|B1IT89|RPIA_ECOLC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226734908|sp|B7MM99|RPIA_ECO45 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226734909|sp|B7NHX4|RPIA_ECO7I RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226734910|sp|B7LYT1|RPIA_ECO8A RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226734911|sp|B7N7F6|RPIA_ECOLU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226734912|sp|B1LDB5|RPIA_ECOSM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|229564307|sp|B1XEJ9|RPIA_ECODH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238057749|sp|B5YQA8|RPIA_ECO5E RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238057750|sp|B6I746|RPIA_ECOSE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238691770|sp|B2U0T0|RPIA_SHIB3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808709|sp|B7UHW1|RPIA_ECO27 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808710|sp|B7LFH2|RPIA_ECO55 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808711|sp|B7MZL0|RPIA_ECO81 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|259494150|sp|C5A0I5|RPIA_ECOBW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|12517444|gb|AAG58041.1|AE005521_9 ribosephosphate isomerase, constitutive [Escherichia coli O157:H7
str. EDL933]
gi|405640|emb|CAA51509.1| ribose 5-phosphate isomerase [Escherichia coli K-12]
gi|882443|gb|AAA69081.1| ribose 5-phosphate isomerase [Escherichia coli str. K-12 substr.
MG1655]
gi|1789280|gb|AAC75951.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli str.
K-12 substr. MG1655]
gi|13363257|dbj|BAB37208.1| ribosephosphate isomerase [Escherichia coli O157:H7 str. Sakai]
gi|30042481|gb|AAP18205.1| ribosephosphate isomerase [Shigella flexneri 2a str. 2457T]
gi|56383751|gb|AAN44383.2| ribosephosphate isomerase [Shigella flexneri 2a str. 301]
gi|73856948|gb|AAZ89655.1| ribosephosphate isomerase, constitutive [Shigella sonnei Ss046]
gi|81242470|gb|ABB63180.1| ribosephosphate isomerase, constitutive [Shigella dysenteriae
Sd197]
gi|81246876|gb|ABB67584.1| ribosephosphate isomerase, constitutive [Shigella boydii Sb227]
gi|85675725|dbj|BAE76978.1| ribosephosphate isomerase, constitutive [Escherichia coli str. K12
substr. W3110]
gi|110616363|gb|ABF05030.1| ribosephosphate isomerase, constitutive [Shigella flexneri 5 str.
8401]
gi|157068053|gb|ABV07308.1| ribose 5-phosphate isomerase A [Escherichia coli HS]
gi|157076760|gb|ABV16468.1| ribose 5-phosphate isomerase A [Escherichia coli E24377A]
gi|169753769|gb|ACA76468.1| ribose 5-phosphate isomerase [Escherichia coli ATCC 8739]
gi|169890308|gb|ACB04015.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli str.
K-12 substr. DH10B]
gi|170521940|gb|ACB20118.1| ribose 5-phosphate isomerase A [Escherichia coli SMS-3-5]
gi|187427962|gb|ACD07236.1| ribose 5-phosphate isomerase A [Shigella boydii CDC 3083-94]
gi|187770763|gb|EDU34607.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4196]
gi|188017814|gb|EDU55936.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4113]
gi|189000540|gb|EDU69526.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4076]
gi|189358712|gb|EDU77131.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4401]
gi|189363891|gb|EDU82310.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4486]
gi|189369231|gb|EDU87647.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4501]
gi|189373917|gb|EDU92333.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC869]
gi|189379720|gb|EDU98136.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC508]
gi|190901756|gb|EDV61510.1| ribose 5-phosphate isomerase A [Escherichia coli B7A]
gi|192930791|gb|EDV83396.1| ribose 5-phosphate isomerase A [Escherichia coli E22]
gi|192959341|gb|EDV89776.1| ribose 5-phosphate isomerase A [Escherichia coli E110019]
gi|194415547|gb|EDX31814.1| ribose 5-phosphate isomerase A [Escherichia coli B171]
gi|194424196|gb|EDX40183.1| ribose 5-phosphate isomerase A [Escherichia coli 101-1]
gi|208728181|gb|EDZ77782.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4206]
gi|208735079|gb|EDZ83766.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4045]
gi|208739190|gb|EDZ86872.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4042]
gi|209161159|gb|ACI38592.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC4115]
gi|209760398|gb|ACI78511.1| ribosephosphate isomerase [Escherichia coli]
gi|209760400|gb|ACI78512.1| ribosephosphate isomerase [Escherichia coli]
gi|209760402|gb|ACI78513.1| ribosephosphate isomerase [Escherichia coli]
gi|209760404|gb|ACI78514.1| ribosephosphate isomerase [Escherichia coli]
gi|209760406|gb|ACI78515.1| ribosephosphate isomerase [Escherichia coli]
gi|209913626|dbj|BAG78700.1| ribose 5-phosphate isomerase [Escherichia coli SE11]
gi|215266284|emb|CAS10713.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli
O127:H6 str. E2348/69]
gi|217319466|gb|EEC27891.1| ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
TW14588]
gi|218353241|emb|CAU99173.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli 55989]
gi|218362230|emb|CAQ99849.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli IAI1]
gi|218366674|emb|CAR04428.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli S88]
gi|218371607|emb|CAR19446.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli IAI39]
gi|218428601|emb|CAR09528.2| ribose 5-phosphate isomerase, constitutive [Escherichia coli ED1a]
gi|218433515|emb|CAR14418.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli
UMN026]
gi|222034607|emb|CAP77349.1| ribose-5-phosphate isomerase A [Escherichia coli LF82]
gi|238863483|gb|ACR65481.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli
BW2952]
gi|242378444|emb|CAQ33225.1| ribose-5-phosphate isomerase A [Escherichia coli BL21(DE3)]
gi|253323290|gb|ACT27892.1| ribose 5-phosphate isomerase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974726|gb|ACT40397.1| ribose-5-phosphate isomerase A [Escherichia coli B str. REL606]
gi|253978892|gb|ACT44562.1| ribose-5-phosphate isomerase A [Escherichia coli BL21(DE3)]
gi|254594263|gb|ACT73624.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli
O157:H7 str. TW14359]
gi|257755685|dbj|BAI27187.1| ribose 5-phosphate isomerase RpiA, constitutive [Escherichia coli
O26:H11 str. 11368]
gi|257760729|dbj|BAI32226.1| ribose 5-phosphate isomerase RpiA, constitutive [Escherichia coli
O103:H2 str. 12009]
gi|257765946|dbj|BAI37441.1| ribose 5-phosphate isomerase RpiA, constitutive [Escherichia coli
O111:H- str. 11128]
gi|260448041|gb|ACX38463.1| ribose 5-phosphate isomerase [Escherichia coli DH1]
gi|281179917|dbj|BAI56247.1| ribose 5-phosphate isomerase [Escherichia coli SE15]
gi|281602246|gb|ADA75230.1| putative ribose 5-phosphate isomerase [Shigella flexneri 2002017]
gi|284922860|emb|CBG35949.1| ribose 5-phosphate isomerase A [Escherichia coli 042]
gi|290764105|gb|ADD58066.1| Ribose 5-phosphate isomerase [Escherichia coli O55:H7 str. CB9615]
gi|291322326|gb|EFE61755.1| ribose 5-phosphate isomerase A [Escherichia coli B088]
gi|291426418|gb|EFE99450.1| ribose-5-phosphate isomerase A [Escherichia coli FVEC1412]
gi|291432356|gb|EFF05338.1| ribose 5-phosphate isomerase A [Escherichia coli B185]
gi|291469043|gb|EFF11534.1| ribose 5-phosphate isomerase A [Escherichia coli B354]
gi|294490564|gb|ADE89320.1| ribose 5-phosphate isomerase A [Escherichia coli IHE3034]
gi|298277288|gb|EFI18804.1| ribose 5-phosphate isomerase A [Escherichia coli FVEC1302]
gi|299879119|gb|EFI87330.1| ribose 5-phosphate isomerase A [Escherichia coli MS 196-1]
gi|305854223|gb|EFM54661.1| ribose-5-phosphate isomerase A [Escherichia coli NC101]
gi|306909363|gb|EFN39858.1| ribose 5-phosphate isomerase [Escherichia coli W]
gi|307625515|gb|ADN69819.1| ribose-5-phosphate isomerase A [Escherichia coli UM146]
gi|308926396|gb|EFP71872.1| ribose 5-phosphate isomerase A [Shigella dysenteriae 1617]
gi|309703273|emb|CBJ02608.1| ribose 5-phosphate isomerase A [Escherichia coli ETEC H10407]
gi|310332787|gb|EFQ00001.1| ribose 5-phosphate isomerase A [Escherichia coli 1827-70]
gi|312290381|gb|EFR18261.1| ribose 5-phosphate isomerase A [Escherichia coli 2362-75]
gi|312947445|gb|ADR28272.1| ribose-5-phosphate isomerase A [Escherichia coli O83:H1 str. NRG
857C]
gi|313647955|gb|EFS12401.1| ribose 5-phosphate isomerase A [Shigella flexneri 2a str. 2457T]
gi|315062217|gb|ADT76544.1| ribose 5-phosphate isomerase, constitutive [Escherichia coli W]
gi|315137512|dbj|BAJ44671.1| ribose-5-phosphate isomerase A [Escherichia coli DH1]
gi|315614928|gb|EFU95566.1| ribose 5-phosphate isomerase A [Escherichia coli 3431]
gi|320175896|gb|EFW50974.1| Ribose 5-phosphate isomerase A [Shigella dysenteriae CDC 74-1112]
gi|320182183|gb|EFW57086.1| Ribose 5-phosphate isomerase A [Shigella boydii ATCC 9905]
gi|320184541|gb|EFW59342.1| Ribose 5-phosphate isomerase A [Shigella flexneri CDC 796-83]
gi|320189258|gb|EFW63917.1| Ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str.
EC1212]
gi|320195032|gb|EFW69661.1| Ribose 5-phosphate isomerase A [Escherichia coli WV_060327]
gi|320202576|gb|EFW77146.1| Ribose 5-phosphate isomerase A [Escherichia coli EC4100B]
gi|320640556|gb|EFX10095.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H7 str.
G5101]
gi|320645803|gb|EFX14788.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H- str.
493-89]
gi|320651103|gb|EFX19543.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H- str. H
2687]
gi|320662118|gb|EFX29519.1| ribose-5-phosphate isomerase A [Escherichia coli O55:H7 str. USDA
5905]
gi|320667193|gb|EFX34156.1| ribose-5-phosphate isomerase A [Escherichia coli O157:H7 str.
LSU-61]
gi|323154608|gb|EFZ40807.1| ribose 5-phosphate isomerase A [Escherichia coli EPECa14]
gi|323162493|gb|EFZ48343.1| ribose 5-phosphate isomerase A [Escherichia coli E128010]
gi|323168043|gb|EFZ53732.1| ribose 5-phosphate isomerase A [Shigella sonnei 53G]
gi|323173877|gb|EFZ59506.1| ribose 5-phosphate isomerase A [Escherichia coli LT-68]
gi|323180361|gb|EFZ65913.1| ribose 5-phosphate isomerase A [Escherichia coli 1180]
gi|323183470|gb|EFZ68867.1| ribose 5-phosphate isomerase A [Escherichia coli 1357]
gi|323188688|gb|EFZ73973.1| ribose 5-phosphate isomerase A [Escherichia coli RN587/1]
gi|323377199|gb|ADX49467.1| ribose 5-phosphate isomerase [Escherichia coli KO11]
gi|323936080|gb|EGB32375.1| ribose 5-phosphate isomerase A [Escherichia coli E1520]
gi|323941996|gb|EGB38175.1| ribose 5-phosphate isomerase A [Escherichia coli E482]
gi|323946601|gb|EGB42624.1| ribose 5-phosphate isomerase A [Escherichia coli H120]
gi|323951649|gb|EGB47524.1| ribose 5-phosphate isomerase A [Escherichia coli H252]
gi|323957365|gb|EGB53087.1| ribose 5-phosphate isomerase A [Escherichia coli H263]
gi|323966715|gb|EGB62147.1| ribose 5-phosphate isomerase A [Escherichia coli M863]
gi|323971737|gb|EGB66965.1| ribose 5-phosphate isomerase A [Escherichia coli TA007]
gi|323978794|gb|EGB73875.1| ribose 5-phosphate isomerase A [Escherichia coli TW10509]
gi|324119706|gb|EGC13586.1| ribose 5-phosphate isomerase A [Escherichia coli E1167]
gi|326339001|gb|EGD62816.1| Ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str. 1044]
gi|326343116|gb|EGD66884.1| Ribose 5-phosphate isomerase A [Escherichia coli O157:H7 str. 1125]
gi|327251679|gb|EGE63365.1| ribose 5-phosphate isomerase A [Escherichia coli STEC_7v]
gi|330908946|gb|EGH37460.1| ribose 5-phosphate isomerase A [Escherichia coli AA86]
gi|331053624|gb|EGI25653.1| ribose 5-phosphate isomerase A [Escherichia coli TA206]
gi|331058419|gb|EGI30400.1| ribose 5-phosphate isomerase A [Escherichia coli TA143]
gi|331063318|gb|EGI35231.1| ribose 5-phosphate isomerase A [Escherichia coli TA271]
gi|331078155|gb|EGI49361.1| ribose 5-phosphate isomerase A [Escherichia coli H299]
gi|332086839|gb|EGI91975.1| ribose 5-phosphate isomerase A [Shigella boydii 5216-82]
gi|332087627|gb|EGI92754.1| ribose 5-phosphate isomerase A [Shigella dysenteriae 155-74]
gi|332090953|gb|EGI96044.1| ribose 5-phosphate isomerase A [Shigella boydii 3594-74]
gi|332344812|gb|AEE58146.1| ribose 5-phosphate isomerase RpiA [Escherichia coli UMNK88]
gi|332752950|gb|EGJ83334.1| ribose 5-phosphate isomerase A [Shigella flexneri 4343-70]
gi|332753750|gb|EGJ84129.1| ribose 5-phosphate isomerase A [Shigella flexneri K-671]
gi|332754753|gb|EGJ85119.1| ribose 5-phosphate isomerase A [Shigella flexneri 2747-71]
gi|332765844|gb|EGJ96057.1| ribose 5-phosphate isomerase A [Shigella flexneri 2930-71]
gi|332999652|gb|EGK19237.1| ribose 5-phosphate isomerase A [Shigella flexneri VA-6]
gi|333000281|gb|EGK19864.1| ribose 5-phosphate isomerase A [Shigella flexneri K-218]
gi|333000564|gb|EGK20142.1| ribose 5-phosphate isomerase A [Shigella flexneri K-272]
gi|333015128|gb|EGK34471.1| ribose 5-phosphate isomerase A [Shigella flexneri K-304]
gi|333015245|gb|EGK34587.1| ribose 5-phosphate isomerase A [Shigella flexneri K-227]
Length = 219
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 169 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|17987257|ref|NP_539891.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 1 str. 16M]
gi|237815434|ref|ZP_04594432.1| ribose 5-phosphate isomerase A [Brucella abortus str. 2308 A]
gi|17982933|gb|AAL52155.1| ribose 5-phosphate isomerase [Brucella melitensis bv. 1 str. 16M]
gi|237790271|gb|EEP64481.1| ribose 5-phosphate isomerase A [Brucella abortus str. 2308 A]
Length = 244
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 154/232 (66%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ YV DGM LG+GTGSTA+EF+ LLA+K+ GFRV +P+S T
Sbjct: 13 MDEARKLKIAAAAEALTYVKDGMRLGIGTGSTAEEFVRLLAEKVKGGFRVIGVPTSERTA 72
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C+ + L + E+ +DL+IDG DE+D L LIKG GGALLREKI+A A+ IVI
Sbjct: 73 KLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALLREKIVAAASDSMIVIA 132
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V+ LGR LPIE+++FG+ T+ A++ A GL L LR F++DGG+Y
Sbjct: 133 DQSKVVETLGRFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHY 192
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + AII +DG + +
Sbjct: 193 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIELARAAIIAGTDG-IRTMNR 243
>gi|149912783|ref|ZP_01901317.1| ribose 5-phosphate isomerase [Roseobacter sp. AzwK-3b]
gi|149813189|gb|EDM73015.1| ribose 5-phosphate isomerase [Roseobacter sp. AzwK-3b]
Length = 262
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+R++ YV DGM +G+GTGSTA + L + + G +++ +P+S T +
Sbjct: 9 DKAKFVAAKRSVDYVEDGMRVGLGTGSTAAWMVRCLGELVREDGLKIKGVPTSTRTADLA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D+ L LIKG GGALL+EKI+A A+ + IVI D
Sbjct: 69 REVGIEVISLDEARWLDLTIDGADEFDASLNLIKGGGGALLQEKIVATASDQMIVIADVG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG T S ++E+ L + LR NG FV+D GNYI+
Sbjct: 129 KEVETLGAFPLPIEVIPFGWETTKSLVEEMLISMDVLGRDATLRMNGDRPFVTDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D G I P ++ L +PGV+E+GLFI++ D I+G DG
Sbjct: 189 DLHLGRIGKPNQLAMVLNQMPGVVENGLFIDICDIVIVGYGDGRVETRD 237
>gi|117625143|ref|YP_854131.1| ribose-5-phosphate isomerase A [Escherichia coli APEC O1]
gi|227888463|ref|ZP_04006268.1| ribose-5-phosphate isomerase A [Escherichia coli 83972]
gi|300815633|ref|ZP_07095857.1| ribose 5-phosphate isomerase A [Escherichia coli MS 107-1]
gi|300820718|ref|ZP_07100869.1| ribose 5-phosphate isomerase A [Escherichia coli MS 119-7]
gi|300896190|ref|ZP_07114739.1| ribose 5-phosphate isomerase A [Escherichia coli MS 198-1]
gi|300906533|ref|ZP_07124226.1| ribose 5-phosphate isomerase A [Escherichia coli MS 84-1]
gi|300921247|ref|ZP_07137619.1| ribose 5-phosphate isomerase A [Escherichia coli MS 115-1]
gi|300925102|ref|ZP_07141017.1| ribose 5-phosphate isomerase A [Escherichia coli MS 182-1]
gi|300928149|ref|ZP_07143692.1| ribose 5-phosphate isomerase A [Escherichia coli MS 187-1]
gi|300936018|ref|ZP_07150966.1| ribose 5-phosphate isomerase A [Escherichia coli MS 21-1]
gi|300947640|ref|ZP_07161810.1| ribose 5-phosphate isomerase A [Escherichia coli MS 116-1]
gi|300954242|ref|ZP_07166707.1| ribose 5-phosphate isomerase A [Escherichia coli MS 175-1]
gi|300980291|ref|ZP_07174945.1| ribose 5-phosphate isomerase A [Escherichia coli MS 45-1]
gi|301049300|ref|ZP_07196270.1| ribose 5-phosphate isomerase A [Escherichia coli MS 185-1]
gi|301303074|ref|ZP_07209201.1| ribose 5-phosphate isomerase A [Escherichia coli MS 124-1]
gi|301327320|ref|ZP_07220573.1| ribose 5-phosphate isomerase A [Escherichia coli MS 78-1]
gi|301643734|ref|ZP_07243773.1| ribose 5-phosphate isomerase A [Escherichia coli MS 146-1]
gi|309793987|ref|ZP_07688412.1| ribose 5-phosphate isomerase A [Escherichia coli MS 145-7]
gi|331643605|ref|ZP_08344736.1| ribose 5-phosphate isomerase A [Escherichia coli H736]
gi|331648661|ref|ZP_08349749.1| ribose 5-phosphate isomerase A [Escherichia coli M605]
gi|331654414|ref|ZP_08355414.1| ribose 5-phosphate isomerase A [Escherichia coli M718]
gi|331674399|ref|ZP_08375159.1| ribose 5-phosphate isomerase A [Escherichia coli TA280]
gi|331678901|ref|ZP_08379575.1| ribose 5-phosphate isomerase A [Escherichia coli H591]
gi|229564308|sp|A1AFA2|RPIA_ECOK1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|42943|emb|CAA47309.1| unnamed protein product [Escherichia coli]
gi|115514267|gb|ABJ02342.1| ribose-5-phosphate isomerase A [Escherichia coli APEC O1]
gi|227834732|gb|EEJ45198.1| ribose-5-phosphate isomerase A [Escherichia coli 83972]
gi|300298899|gb|EFJ55284.1| ribose 5-phosphate isomerase A [Escherichia coli MS 185-1]
gi|300318826|gb|EFJ68610.1| ribose 5-phosphate isomerase A [Escherichia coli MS 175-1]
gi|300359924|gb|EFJ75794.1| ribose 5-phosphate isomerase A [Escherichia coli MS 198-1]
gi|300401709|gb|EFJ85247.1| ribose 5-phosphate isomerase A [Escherichia coli MS 84-1]
gi|300409299|gb|EFJ92837.1| ribose 5-phosphate isomerase A [Escherichia coli MS 45-1]
gi|300411789|gb|EFJ95099.1| ribose 5-phosphate isomerase A [Escherichia coli MS 115-1]
gi|300418764|gb|EFK02075.1| ribose 5-phosphate isomerase A [Escherichia coli MS 182-1]
gi|300452755|gb|EFK16375.1| ribose 5-phosphate isomerase A [Escherichia coli MS 116-1]
gi|300458810|gb|EFK22303.1| ribose 5-phosphate isomerase A [Escherichia coli MS 21-1]
gi|300463840|gb|EFK27333.1| ribose 5-phosphate isomerase A [Escherichia coli MS 187-1]
gi|300526982|gb|EFK48051.1| ribose 5-phosphate isomerase A [Escherichia coli MS 119-7]
gi|300531562|gb|EFK52624.1| ribose 5-phosphate isomerase A [Escherichia coli MS 107-1]
gi|300841738|gb|EFK69498.1| ribose 5-phosphate isomerase A [Escherichia coli MS 124-1]
gi|300846052|gb|EFK73812.1| ribose 5-phosphate isomerase A [Escherichia coli MS 78-1]
gi|301077936|gb|EFK92742.1| ribose 5-phosphate isomerase A [Escherichia coli MS 146-1]
gi|307554892|gb|ADN47667.1| constitutive ribose-5-phosphate isomerase [Escherichia coli ABU
83972]
gi|308122394|gb|EFO59656.1| ribose 5-phosphate isomerase A [Escherichia coli MS 145-7]
gi|315256798|gb|EFU36766.1| ribose 5-phosphate isomerase A [Escherichia coli MS 85-1]
gi|315289476|gb|EFU48871.1| ribose 5-phosphate isomerase A [Escherichia coli MS 110-3]
gi|315293906|gb|EFU53258.1| ribose 5-phosphate isomerase A [Escherichia coli MS 153-1]
gi|315295702|gb|EFU55022.1| ribose 5-phosphate isomerase A [Escherichia coli MS 16-3]
gi|324017233|gb|EGB86452.1| ribose 5-phosphate isomerase A [Escherichia coli MS 117-3]
gi|331037076|gb|EGI09300.1| ribose 5-phosphate isomerase A [Escherichia coli H736]
gi|331042408|gb|EGI14550.1| ribose 5-phosphate isomerase A [Escherichia coli M605]
gi|331047796|gb|EGI19873.1| ribose 5-phosphate isomerase A [Escherichia coli M718]
gi|331068493|gb|EGI39888.1| ribose 5-phosphate isomerase A [Escherichia coli TA280]
gi|331073731|gb|EGI45052.1| ribose 5-phosphate isomerase A [Escherichia coli H591]
Length = 231
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 71 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 181 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 231
>gi|13470739|ref|NP_102308.1| ribose-5-phosphate isomerase A [Mesorhizobium loti MAFF303099]
gi|30173365|sp|Q98ML9|RPIA_RHILO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|14021482|dbj|BAB48094.1| ribose 5-phosphate isomerase [Mesorhizobium loti MAFF303099]
Length = 243
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 117/228 (51%), Positives = 154/228 (67%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA Q+K AAR A+ +V DGM LG+GTG+TA+EF+ LLADK+A G V +P+S T
Sbjct: 1 MDARQLKVEAARAALAHVSDGMRLGIGTGTTAEEFVRLLADKVATGMTVIGVPTSERTAA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ +PL + E+ +DL++DG DE+D L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 LCRELGVPLSTLEETPELDLTVDGADEVDPELTLIKGGGGALLREKIVAAASQRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ LGR LPIE++QFG+ T A+ + A+ GL+ + LR G FV+DGG++I
Sbjct: 121 RSKMVETLGRFPLPIEVNQFGLRATEIAIAKTAADLGLSGPITLRMTGGQAFVTDGGHFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S L IPGV+EHGLFI + AII DG V
Sbjct: 181 LDASFGRIPDTRALSNALHAIPGVVEHGLFIGLASTAIIAGGDGIQTV 228
>gi|146312972|ref|YP_001178046.1| ribose-5-phosphate isomerase A [Enterobacter sp. 638]
gi|145319848|gb|ABP61995.1| ribose 5-phosphate isomerase [Enterobacter sp. 638]
Length = 231
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 71 KLKSLGITVFDLNEVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDILGTFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 181 LDVYNLEILDAVAMENAINAIPGVVTVGLFANRGADVALIGTADGVKTIVK 231
>gi|260459433|ref|ZP_05807688.1| ribose 5-phosphate isomerase [Mesorhizobium opportunistum WSM2075]
gi|259034987|gb|EEW36243.1| ribose 5-phosphate isomerase [Mesorhizobium opportunistum WSM2075]
Length = 277
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 116/228 (50%), Positives = 152/228 (66%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA Q+K AAR A+ +V DGM LG+GTG+TA+EF+ LLAD++A G V +P+S T
Sbjct: 35 MDARQLKVEAARAALAHVTDGMRLGIGTGTTAEEFVRLLADRVATGMTVIGVPTSERTAA 94
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ +PL + E+ +DL++DG DE+D L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 95 LCRELGVPLSTLEETPELDLTVDGADEVDPALTLIKGGGGALLREKIVAAASQRMIVIAD 154
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ LGR LPIE++QFG+ T A+ A GL+ + LR G FV+DGG++I
Sbjct: 155 RSKMVETLGRFPLPIEVNQFGLRATEIAVAAAAEKLGLSGPVTLRMTGGQAFVTDGGHFI 214
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA FG IPD + +S L IPGV+EHGLFI + AII DG V
Sbjct: 215 LDASFGRIPDTRALSNALHAIPGVVEHGLFIGLASAAIIAGGDGIQTV 262
>gi|194431760|ref|ZP_03064051.1| ribose 5-phosphate isomerase A [Shigella dysenteriae 1012]
gi|194420116|gb|EDX36194.1| ribose 5-phosphate isomerase A [Shigella dysenteriae 1012]
Length = 231
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 71 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 181 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 231
>gi|301027370|ref|ZP_07190710.1| ribose 5-phosphate isomerase A [Escherichia coli MS 69-1]
gi|300395070|gb|EFJ78608.1| ribose 5-phosphate isomerase A [Escherichia coli MS 69-1]
Length = 231
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 71 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 181 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 231
>gi|62289933|ref|YP_221726.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 1 str. 9-941]
gi|189024175|ref|YP_001934943.1| ribose-5-phosphate isomerase A [Brucella abortus S19]
gi|225852515|ref|YP_002732748.1| ribose-5-phosphate isomerase A [Brucella melitensis ATCC 23457]
gi|254689239|ref|ZP_05152493.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 6 str. 870]
gi|254693724|ref|ZP_05155552.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 3 str. Tulya]
gi|254697374|ref|ZP_05159202.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 2 str.
86/8/59]
gi|254730272|ref|ZP_05188850.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 4 str. 292]
gi|256044668|ref|ZP_05447572.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113562|ref|ZP_05454382.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 3 str.
Ether]
gi|256257489|ref|ZP_05463025.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 9 str. C68]
gi|256263996|ref|ZP_05466528.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 2 str.
63/9]
gi|260545319|ref|ZP_05821060.1| ribose-5-phosphate isomerase A [Brucella abortus NCTC 8038]
gi|260564014|ref|ZP_05834500.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 1 str. 16M]
gi|260754744|ref|ZP_05867092.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 6 str. 870]
gi|260757967|ref|ZP_05870315.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 4 str. 292]
gi|260761790|ref|ZP_05874133.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 2 str.
86/8/59]
gi|260883765|ref|ZP_05895379.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 9 str. C68]
gi|261213996|ref|ZP_05928277.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 3 str. Tulya]
gi|265991092|ref|ZP_06103649.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994929|ref|ZP_06107486.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 3 str.
Ether]
gi|297248333|ref|ZP_06932051.1| ribose 5-phosphate isomerase A [Brucella abortus bv. 5 str. B3196]
gi|30173348|sp|Q8YH30|RPIA_BRUME RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|62196065|gb|AAX74365.1| RpiA, ribose 5-phosphate isomerase A [Brucella abortus bv. 1 str.
9-941]
gi|189019747|gb|ACD72469.1| ribose-5-phosphate isomerase A [Brucella abortus S19]
gi|225640880|gb|ACO00794.1| ribose 5-phosphate isomerase A [Brucella melitensis ATCC 23457]
gi|260096726|gb|EEW80601.1| ribose-5-phosphate isomerase A [Brucella abortus NCTC 8038]
gi|260154030|gb|EEW89122.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 1 str. 16M]
gi|260668285|gb|EEX55225.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 4 str. 292]
gi|260672222|gb|EEX59043.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 2 str.
86/8/59]
gi|260674852|gb|EEX61673.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 6 str. 870]
gi|260873293|gb|EEX80362.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 9 str. C68]
gi|260915603|gb|EEX82464.1| ribose-5-phosphate isomerase A [Brucella abortus bv. 3 str. Tulya]
gi|262766042|gb|EEZ11831.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 3 str.
Ether]
gi|263001876|gb|EEZ14451.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094140|gb|EEZ18062.1| ribose-5-phosphate isomerase A [Brucella melitensis bv. 2 str.
63/9]
gi|297175502|gb|EFH34849.1| ribose 5-phosphate isomerase A [Brucella abortus bv. 5 str. B3196]
gi|326409030|gb|ADZ66095.1| ribose-5-phosphate isomerase A [Brucella melitensis M28]
gi|326538740|gb|ADZ86955.1| ribose 5-phosphate isomerase A [Brucella melitensis M5-90]
Length = 232
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 154/232 (66%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ YV DGM LG+GTGSTA+EF+ LLA+K+ GFRV +P+S T
Sbjct: 1 MDEARKLKIAAAAEALTYVKDGMRLGIGTGSTAEEFVRLLAEKVKGGFRVIGVPTSERTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C+ + L + E+ +DL+IDG DE+D L LIKG GGALLREKI+A A+ IVI
Sbjct: 61 KLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALLREKIVAAASDSMIVIA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V+ LGR LPIE+++FG+ T+ A++ A GL L LR F++DGG+Y
Sbjct: 121 DQSKVVETLGRFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHY 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + AII +DG + +
Sbjct: 181 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIELARAAIIAGTDG-IRTMNR 231
>gi|146341613|ref|YP_001206661.1| ribose-5-phosphate isomerase A [Bradyrhizobium sp. ORS278]
gi|146194419|emb|CAL78444.1| ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI)
[Bradyrhizobium sp. ORS278]
Length = 230
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 105/232 (45%), Positives = 150/232 (64%), Gaps = 4/232 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +KR AA RA++ V GM LG+GTGSTAK F+ LL +K+ G +V +P+S T
Sbjct: 1 MDA--LKRQAAARALEEVESGMKLGLGTGSTAKHFVDLLGEKVRAGLKVVGVPTSEATRA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL + +++ +D++IDG DEI+ L LIKG GGALLREKI+A A++R IVI D
Sbjct: 59 QAEACGVPLTTLDEIDRLDITIDGADEINPALDLIKGGGGALLREKIVASASNRMIVIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
+SK V LGR LPIE+ FG+ T + + + G+ + LR++ G +FV+DGG++
Sbjct: 119 DSKWVARLGRFPLPIEVVPFGIAATQREIADAFTKAGVAGPMSLRKSADGHVFVTDGGHW 178
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVD G I DP ++ L IPGV+EHGLFI + AI+ + G V+Q+
Sbjct: 179 IVDVRLGEIEDPPRLASFLSAIPGVVEHGLFIGLGSTAILAGAQG-IRVIQR 229
>gi|291086187|ref|ZP_06355062.2| ribose 5-phosphate isomerase A [Citrobacter youngae ATCC 29220]
gi|291068482|gb|EFE06591.1| ribose 5-phosphate isomerase A [Citrobacter youngae ATCC 29220]
Length = 238
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 20 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 77
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 78 KLKSLGIHVFDLNEVDSLGVYVDGADEINGHMQMIKGGGAALTREKIIASVAKKFICIAD 137
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG LP+E+ + G E R V+D GN I
Sbjct: 138 ASKEVDILGNFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 187
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 188 LDVHGLEILDAIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 238
>gi|56696213|ref|YP_166570.1| ribose-5-phosphate isomerase A [Ruegeria pomeroyi DSS-3]
gi|67461276|sp|Q5LTT5|RPIA_SILPO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|56677950|gb|AAV94616.1| ribose 5-phosphate isomerase [Ruegeria pomeroyi DSS-3]
Length = 262
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFC 62
+ K AA+RA V DGM +G+GTGSTA + L D + G +++ +P+S T
Sbjct: 9 DKAKFVAAKRAADLVEDGMRVGLGTGSTAAWLVRCLGDMVRKEGLKMRGVPTSTRTAQLA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + ++ +D++IDG DE D L LIKG GGALL+EKI+A A+ + +VI D
Sbjct: 69 REVGIEVITLDEARWLDITIDGADEFDGDLNLIKGGGGALLQEKIVATASDQMVVIADLG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG T + L+E L LR NG FV+D GN+I+
Sbjct: 129 KEVSRLGAFPLPVEVIPFGWQTTQALLEETLISMDVLGRTATLRMNGDTPFVTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ L IPGV+E+GLFI++ D ++G DG +
Sbjct: 189 DLHLQRIGNARQLALVLNQIPGVVENGLFIDICDTVVVGHGDGRVEIRD 237
>gi|30173331|sp|Q8RLY6|RPIA_ENTCL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|19849573|gb|AAL38664.1| ribose-5-phosphate isomerase [Enterobacter cloacae]
Length = 219
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGITVFDLNEVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGNFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGLEILDAIALENAINAIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|156932633|ref|YP_001436549.1| hypothetical protein ESA_00415 [Cronobacter sakazakii ATCC BAA-894]
gi|156530887|gb|ABU75713.1| hypothetical protein ESA_00415 [Cronobacter sakazakii ATCC BAA-894]
Length = 231
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ L + N V S +T
Sbjct: 13 MTQDELKKAVGWAALKYVEPGTIVGVGTGSTAAHFIDALG-TMKNEIEGAVSSSDASTAK 71
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 72 L-KSLGITVFDLNEVDSLGIYVDGADEINGQMQMIKGGGAALTREKIIASVAQKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDVLGTFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + I DP + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 181 LDVYGLTILDPIALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 231
>gi|304391836|ref|ZP_07373778.1| ribose 5-phosphate isomerase A [Ahrensia sp. R2A130]
gi|303296065|gb|EFL90423.1| ribose 5-phosphate isomerase A [Ahrensia sp. R2A130]
Length = 233
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 103/224 (45%), Positives = 148/224 (66%), Gaps = 1/224 (0%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK+ A A+ YV DGM LG+GTGSTA+ F+ LA K+A+G + +P+S T C+
Sbjct: 4 MKQRAGEAALDYVSDGMKLGIGTGSTAEAFVRALAPKVADGLSIIGVPTSERTRELCEEL 63
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+PL + E+ +DL+IDG DEID L LIKG GGALLREKI+A A+ R IVI D SK V
Sbjct: 64 GVPLTTLEETPHLDLTIDGADEIDPDLALIKGAGGALLREKIVAAASDRMIVIADTSKIV 123
Query: 126 DF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+ +PIE+D+FG+ T +A+++ AS GL+ ++ +R NG +++DGG+ I+DA
Sbjct: 124 ETLGTSFPVPIEVDRFGLASTRNAIEKAASQLGLSGDIVVRTNGDAPYITDGGHLILDAS 183
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I DP+ ++ L IPGV+EHGLF+ + D AI+ + G +V
Sbjct: 184 FRRIVDPERLAVALNVIPGVVEHGLFVGLADIAIVASGTGVEIV 227
>gi|148559000|ref|YP_001258950.1| ribose-5-phosphate isomerase A [Brucella ovis ATCC 25840]
gi|148370257|gb|ABQ60236.1| ribose 5-phosphate isomerase A [Brucella ovis ATCC 25840]
Length = 232
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 115/232 (49%), Positives = 153/232 (65%), Gaps = 2/232 (0%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD A ++K AA A+ YV DGM LG+GTGSTA+EF+ LLA+K+ GFRV +P+S T
Sbjct: 1 MDEARKLKIAAAAEALTYVKDGMRLGIGTGSTAEEFVRLLAEKVKGGFRVIGVPTSERTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C+ + L + E+ +DL+IDG DE+D L LIKG GGALLREKI+A A+ IVI
Sbjct: 61 KLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALLREKIVAAASDSMIVIA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V+ LGR LPIE+++FG+ T+ A++ A GL L LR F++DGG+Y
Sbjct: 121 DQSKVVETLGRFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHY 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVDA FG IPDP+ +S L IPGV+EHGLFI + II +DG + +
Sbjct: 181 IVDASFGRIPDPKTLSDALFAIPGVVEHGLFIGLARATIIAGTDG-IRTMNR 231
>gi|170766033|ref|ZP_02900844.1| ribose 5-phosphate isomerase A [Escherichia albertii TW07627]
gi|170125179|gb|EDS94110.1| ribose 5-phosphate isomerase A [Escherichia albertii TW07627]
Length = 219
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALG-TMKDQIEGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKI+A A +FI I D
Sbjct: 60 L-KSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIVASVAKKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|304407119|ref|ZP_07388773.1| ribose 5-phosphate isomerase [Paenibacillus curdlanolyticus YK9]
gi|304344106|gb|EFM09946.1| ribose 5-phosphate isomerase [Paenibacillus curdlanolyticus YK9]
Length = 286
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 137/228 (60%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ KR AA +A+ Y+ +GM +G+GTGSTA + +A ++ G R+ + SS+ +E +
Sbjct: 1 MNAKRLAAEKAVTYIDNGMVVGLGTGSTAYYAIHHIAKRVQEGLRIHAVASSKQSETLAR 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ D+ ++D+SIDG DE+D R LIKG GGALLREKI+A +++FIVI D+SK
Sbjct: 61 ELQIPIIPFSDIETIDISIDGADEVDPRGNLIKGGGGALLREKILAVNSNKFIVIVDDSK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG+ LP+EI F T+ + G N LR G FV+D GNYIVD
Sbjct: 121 VVPQLGKFPLPVEIVPFAFELTMGK----LNRLGSNG--ILRMQGDQPFVTDNGNYIVDC 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I D +S +L IPGV+EHGLFI + D I+G+ +G +L +
Sbjct: 175 HMERIADAARLSEQLHAIPGVVEHGLFIQLADTIIVGSEEGA-ELLNR 221
>gi|324005566|gb|EGB74785.1| ribose 5-phosphate isomerase A [Escherichia coli MS 57-2]
Length = 231
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIDGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A FI I D
Sbjct: 71 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAETFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 181 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 231
>gi|229060466|ref|ZP_04197829.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH603]
gi|228718849|gb|EEL70470.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH603]
Length = 220
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 131/225 (58%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G +Q +P+S+ TE K
Sbjct: 1 MNLKQLAGEYAADFVKDGMKVGLGTGSTVYWTIQKLGERVQEGLSIQAVPTSKETEVLAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S + +DL+IDG DEI++ L+LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 61 QLAIPLISLNETDILDLTIDGADEINNDLQLIKGGGGALLREKIVATSSEKLIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T ++ + E LR G F++D GN+I+D
Sbjct: 121 IVSHLGTFPLPIEIIPFSWKQTEKKVQSIGC------ETCLRMKDGGPFITDNGNFIIDC 174
Query: 184 FF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
F I +P + EL I GV+E GLFINM IIGT +G
Sbjct: 175 IFTNKILNPNDTNTELKMITGVVETGLFINMTSKVIIGTENGIKE 219
>gi|291618750|ref|YP_003521492.1| RpiA [Pantoea ananatis LMG 20103]
gi|291153780|gb|ADD78364.1| RpiA [Pantoea ananatis LMG 20103]
gi|327395083|dbj|BAK12505.1| ribose-5-phosphate isomerase A RpiA [Pantoea ananatis AJ13355]
Length = 244
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 112/232 (48%), Gaps = 14/232 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T+
Sbjct: 26 MTQDELKKAVGWAALDYVQPGTVVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSEASTQK 84
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + ++ + + +DG DEI+ ++++IKG G AL REKI+A A +FI I D
Sbjct: 85 L-KSLGIQVFDLNEIDDLAIYVDGADEINPQMQMIKGGGAALTREKIVAAVAKKFICIAD 143
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LGR LP+E+ + G E R V+D GN I
Sbjct: 144 ASKEVDVLGRFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VVTDNGNII 193
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I DP + + +PGV+ GLF D A+IG DG L+K
Sbjct: 194 LDVHNLRILDPIELEKTINALPGVVTVGLFATRGADVALIGGPDG-VKTLKK 244
>gi|283479656|emb|CAY75572.1| ribose 5-phosphate isomerase A [Erwinia pyrifoliae DSM 12163]
Length = 313
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA + + V S +T
Sbjct: 95 MTQDELKKAVGWAALDYVTPGTVVGVGTGSTAAHFIDALA-SMKHQIEGTVSSSELSTAR 153
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + IP+ ++ + L +DG DEI+ ++++IKG G AL REKIIA A RFI I D
Sbjct: 154 L-KAYGIPVFDLNEIDVLSLYVDGADEINGQMQMIKGGGAALTREKIIAAVADRFICIAD 212
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 213 ESKQVDVLGHFPLPVEVIPMARSYVARE----LVKLGGLPEYRQD------VVTDNGNII 262
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + + GV+ GLF D A+IGT++G + +
Sbjct: 263 LDVHNLNIIDPIRLETAINALTGVVTVGLFAARGADVALIGTANGVQTIKK 313
>gi|191171822|ref|ZP_03033368.1| ribose 5-phosphate isomerase A [Escherichia coli F11]
gi|190907857|gb|EDV67450.1| ribose 5-phosphate isomerase A [Escherichia coli F11]
Length = 219
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFINALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 169 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|261408057|ref|YP_003244298.1| ribose 5-phosphate isomerase [Paenibacillus sp. Y412MC10]
gi|261284520|gb|ACX66491.1| ribose 5-phosphate isomerase [Paenibacillus sp. Y412MC10]
Length = 238
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 137/230 (59%), Gaps = 6/230 (2%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M + + MK+ AA A +YV DGM +G+GTGSTA ++ + + + +G +Q + +S +E
Sbjct: 1 MTSEMNMKKIAAEHAAKYVQDGMKIGLGTGSTAYYAILKIGEMVRSGLSIQAVATSDASE 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + +DL+IDG DE+D +LRLIKG GGALLREKI A+ + R +++
Sbjct: 61 KLAMEQGIPLTPVHQIDRLDLTIDGADELDDQLRLIKGGGGALLREKITAYHSERLVIVA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K V LG LP+EI F T+ +L ++ L R+ GL+V+D GNY
Sbjct: 121 DEAKAVAQLGAFPLPVEIVPFAYEWTIRSLAQLGCSVQLR-----RQPDEGLYVTDNGNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+ D F I P+ +S L +PGV+EHGLFI M D AIIG DG +L
Sbjct: 176 VADCRFQEISGPEELSSRLGTVPGVVEHGLFIGMADQAIIGCRDGSVRIL 225
>gi|116333224|ref|YP_794751.1| ribose-5-phosphate isomerase A [Lactobacillus brevis ATCC 367]
gi|122270088|sp|Q03SV2|RPIA_LACBA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|116098571|gb|ABJ63720.1| ribose-5-phosphate isomerase [Lactobacillus brevis ATCC 367]
Length = 228
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD +K + A++YV DGM LG+GTGST + + L +++ G + + +S +
Sbjct: 1 MDQNALKALVGQEAVKYVEDGMILGIGTGSTVRYMIDALGERVKNEGLHIIGVATSDRSA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + ++V +DL+IDG DEID + IKG G A L EKI+A +++ + I
Sbjct: 61 KQAESLGITIKELDEVDHLDLTIDGADEIDDNFQGIKGGGAAHLWEKIVAINSTKNMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V LG LP+E+ FG + L E + G N R+ G ++D NY
Sbjct: 121 DESKMVHHLGAFPLPLEVIPFGSSHVL----EKLNKMGFNPSFRMTDTGEH-VLTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P ++ L I GV+EHGLF++ V+ I+G DG
Sbjct: 176 IIDLHLGRIDHPHDLANTLNGIVGVVEHGLFLDTVNTVIVGRQDG 220
>gi|89055666|ref|YP_511117.1| ribose-5-phosphate isomerase A [Jannaschia sp. CCS1]
gi|123286304|sp|Q28MH0|RPIA_JANSC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|88865215|gb|ABD56092.1| ribose-5-phosphate isomerase [Jannaschia sp. CCS1]
Length = 262
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ K AARRA++YV DGM +G+GTGSTA + L + + G ++ + +S T +
Sbjct: 9 DRAKYVAARRAVEYVEDGMRVGLGTGSTAAWMVRCLGELVRDEGMQITGVATSTRTADLA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ + + + +DV +DL+IDG DE D L LIKG GGALL EK++A A+ + +VI D +
Sbjct: 69 RDVGVTVKTLDDVRWLDLTIDGTDEYDPNLNLIKGGGGALLHEKVVATASDQMVVIADPT 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K+VD LG LP+E+ FG T + ++E+ S L LR +G+ F +D GN I+
Sbjct: 129 KQVDTLGAFPLPVEVIPFGWQTTKALIEEMLSNLDVLGRSASLRLSGAEPFRTDEGNLIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I P +S L IPGV+E+GLF+++ D +IG +DG V
Sbjct: 189 DLHLRRIAQPAQLSLVLNQIPGVVENGLFLDICDVLVIGNADGTVEVRD 237
>gi|295097449|emb|CBK86539.1| ribose 5-phosphate isomerase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 219
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGITVFDLNEVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGNFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGLEILDAIALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|260599255|ref|YP_003211826.1| ribose-5-phosphate isomerase A [Cronobacter turicensis z3032]
gi|260218432|emb|CBA33541.1| Ribose-5-phosphate isomerase A [Cronobacter turicensis z3032]
Length = 231
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 83/231 (35%), Positives = 118/231 (51%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L + N V S +TE
Sbjct: 13 MTQDELKKAVGWAALQYVEPGTIVGVGTGSTAAHFIDALG-TMKNEIEGAVSSSDASTEK 71
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 72 L-KSLGITVFDLNEVDSLGIYVDGADEINGQMQMIKGGGAALTREKIIASVAKKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDVLGNFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + I DP + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 181 LDVYGMAILDPIALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 231
>gi|206578185|ref|YP_002236623.1| ribose 5-phosphate isomerase A [Klebsiella pneumoniae 342]
gi|288933602|ref|YP_003437661.1| ribose 5-phosphate isomerase [Klebsiella variicola At-22]
gi|290511332|ref|ZP_06550701.1| ribose 5-phosphate isomerase A [Klebsiella sp. 1_1_55]
gi|238057751|sp|B5XUC4|RPIA_KLEP3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|206567243|gb|ACI09019.1| ribose 5-phosphate isomerase A [Klebsiella pneumoniae 342]
gi|288888331|gb|ADC56649.1| ribose 5-phosphate isomerase [Klebsiella variicola At-22]
gi|289776325|gb|EFD84324.1| ribose 5-phosphate isomerase A [Klebsiella sp. 1_1_55]
Length = 219
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIPVFDLNSVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGAFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGLEILDAVALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|260662429|ref|ZP_05863324.1| ribose 5-phosphate isomerase A [Lactobacillus fermentum 28-3-CHN]
gi|260553120|gb|EEX26063.1| ribose 5-phosphate isomerase A [Lactobacillus fermentum 28-3-CHN]
Length = 226
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 128/225 (56%), Gaps = 7/225 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K + A++YV DGM +G+GTGST + + L +++ G ++ + +SR T
Sbjct: 1 MDQNELKALVGKEAVKYVEDGMIVGLGTGSTVRFMVDALGERVKNEGLKIVGVTTSRRTT 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
I + ++V VDL+IDG DE+ + + IKG GGALL EK++ A+++ I I
Sbjct: 61 KQATELGITIKDIDEVDHVDLTIDGADEVSNDFQGIKGGGGALLWEKVVNDASTKNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG +P+E+ FG ++ + + R +G +++D NY
Sbjct: 121 DESKLVDKLGDFGVPVEVIPFGAAHVFRKFEKKGY------QPQWRMDGDNRYLTDEKNY 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P+ ++ +L + GV+EHGLF++ V+ I+G DG
Sbjct: 175 IIDLKMGKIDSPKTLAEDLIHTVGVVEHGLFLDRVNEVIVGRQDG 219
>gi|300995653|ref|ZP_07181181.1| ribose 5-phosphate isomerase A [Escherichia coli MS 200-1]
gi|300304761|gb|EFJ59281.1| ribose 5-phosphate isomerase A [Escherichia coli MS 200-1]
gi|324011736|gb|EGB80955.1| ribose 5-phosphate isomerase A [Escherichia coli MS 60-1]
Length = 231
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFINALGTM--KGQIEGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 71 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 181 LDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 231
>gi|296104576|ref|YP_003614722.1| ribose-5-phosphate isomerase A [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059035|gb|ADF63773.1| ribose-5-phosphate isomerase A [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 219
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGITVFDLNEVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARE----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGLEILDAIALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|237729855|ref|ZP_04560336.1| ribose-5-phosphate isomerase A [Citrobacter sp. 30_2]
gi|226908461|gb|EEH94379.1| ribose-5-phosphate isomerase A [Citrobacter sp. 30_2]
Length = 238
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 20 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 77
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 78 KLKSLGIHVFDLNEVDCLGVYVDGADEINGHMQMIKGGGAALTREKIIASVAKKFICIAD 137
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG LP+E+ + G E R V+D GN I
Sbjct: 138 ASKEVDILGNFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 187
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 188 LDVHGLEILDAIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 238
>gi|152971867|ref|YP_001336976.1| ribose-5-phosphate isomerase A [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262042559|ref|ZP_06015716.1| ribose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|166200048|sp|A6TDS5|RPIA_KLEP7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150956716|gb|ABR78746.1| ribose-5-phosphate isomerase A [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259040119|gb|EEW41233.1| ribose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 219
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGITVFDLNSVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGLEILDAIALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|261342316|ref|ZP_05970174.1| ribose 5-phosphate isomerase A [Enterobacter cancerogenus ATCC
35316]
gi|288315659|gb|EFC54597.1| ribose 5-phosphate isomerase A [Enterobacter cancerogenus ATCC
35316]
Length = 219
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGITVFDLNEVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGNFPLPVEVIPMARSAVARE----LVRLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGLEILDAVALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|307946657|ref|ZP_07661992.1| ribose 5-phosphate isomerase A [Roseibium sp. TrichSKD4]
gi|307770321|gb|EFO29547.1| ribose 5-phosphate isomerase A [Roseibium sp. TrichSKD4]
Length = 229
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 2/231 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A Q K+ AA RA V GM LG+GTGSTA+ F+ L K+ +G V +P+S T
Sbjct: 1 MSATQ-KQKAAERAADDVSSGMKLGIGTGSTAEFFVKALGQKVRDGLDVVGVPTSERTRE 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I L + + + ++DL++DG DEI L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 60 LAEQEGIRLSTLDALGTLDLTVDGADEIGPELALIKGGGGALLREKIVAAASDRMIVIAD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG+ LPIE++ FG+ T A++ V L +L LR FV+DGG+YI
Sbjct: 120 ESKTVDVLGQFPLPIEVNPFGLGATRVAIEAVLKGMVLPAQLELRGGDDHPFVTDGGHYI 179
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+DA IPDP ++ +L IPGV+EHGLFI++ A + T+D + L+K
Sbjct: 180 LDAHLQAIPDPSGLAEKLVAIPGVVEHGLFISLASKAYVATAD-SVITLEK 229
>gi|229018105|ref|ZP_04174980.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH1273]
gi|229024287|ref|ZP_04180745.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH1272]
gi|228736981|gb|EEL87518.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH1272]
gi|228743196|gb|EEL93321.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH1273]
Length = 221
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 132/225 (58%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGMT+G+GTGST + L ++ G +Q +P+S+ TE K
Sbjct: 2 MNLKQLAGEYAAGFVRDGMTIGLGTGSTVYWTIQKLGQRVQEGLSIQAVPTSKETEVLAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S ++ +DL+IDG DE++S L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLSIPLISLNEIDILDLTIDGADEMNSNLQLIKGGGGALLREKIVAASSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T ++ + E RLR G F++D GN I+D+
Sbjct: 122 LVSHLGVFPLPVEIIPFSWKQTEKRVQALGC------ETRLRMKDDGPFITDNGNLIIDS 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
F I +P +L I GV+E GLFINM AIIGT +G
Sbjct: 176 IFPNKILNPNETHTKLKMITGVVETGLFINMTSKAIIGTENGIKE 220
>gi|290476422|ref|YP_003469327.1| ribosephosphate isomerase [Xenorhabdus bovienii SS-2004]
gi|289175760|emb|CBJ82563.1| ribosephosphate isomerase, constitutive [Xenorhabdus bovienii
SS-2004]
Length = 219
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ L I N V S +TE
Sbjct: 1 MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALG-TIKNQIEGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP+ +V S+D+ +DG DEI+ + +IKG G AL REKIIA A +FI + D
Sbjct: 60 LKNL-GIPIFDCNEVDSLDIYVDGADEINDHMHMIKGGGAALTREKIIAAVAKKFICVID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESKRVD LG+ LP+E+ + G R V+D GN I
Sbjct: 119 ESKRVDVLGKFPLPVEVIPMARSYVARE----LVKLGGTPVYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + ++ I GV+ GLF N D +IGT+DG + +
Sbjct: 169 LDVHNLAILDPIALENKINGIAGVVTVGLFANRSADVVLIGTADGVKTIAE 219
>gi|118588076|ref|ZP_01545486.1| ribose-5-phosphate isomerase A [Stappia aggregata IAM 12614]
gi|118439698|gb|EAV46329.1| ribose-5-phosphate isomerase A [Stappia aggregata IAM 12614]
Length = 230
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 101/229 (44%), Positives = 138/229 (60%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M Q K+ AA RA V GM LG+GTGSTA+ F+ LA ++ +G V +P+S T
Sbjct: 1 MS-DQYKKLAAERAADDVTSGMRLGIGTGSTAEFFVHALARRVQDGLDVIGVPTSERTRE 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I L + +++ +DL++DG DE+D L LIKG GGALLREKI+A A++ IVI D
Sbjct: 60 LASSLGIRLTTLDELPELDLTVDGADELDPHLSLIKGGGGALLREKIVASASASMIVIAD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V LGR LPIE+ FG+ T A+ +V GL + L LR + FV+DGG++I
Sbjct: 120 GSKEVATLGRFPLPIEVVPFGLEATRRAILKVFEGLGLPQNLALRGGSAEPFVTDGGHFI 179
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+DA IP+ + + L IPGV+EHGLFI + A + +DG VL
Sbjct: 180 LDAQLESIPEVRTLGDRLVAIPGVVEHGLFIELATKAYVAGTDGVKTVL 228
>gi|329929997|ref|ZP_08283636.1| ribose 5-phosphate isomerase A [Paenibacillus sp. HGF5]
gi|328935519|gb|EGG31989.1| ribose 5-phosphate isomerase A [Paenibacillus sp. HGF5]
Length = 238
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 135/230 (58%), Gaps = 6/230 (2%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M + MK+ AA A +YV DGM +G+GTGSTA ++ + + + +G +Q + +S +E
Sbjct: 1 MTSEINMKKIAAEHAAKYVQDGMKIGLGTGSTAYYAILKIGEMVRSGLSIQAVATSDASE 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
I L + +DL+IDG DE+D +LRLIKG GGALLREKI A+ + R +++
Sbjct: 61 KLAMEQGISLTPVHQIDRLDLTIDGADELDDQLRLIKGGGGALLREKITAYHSERLVIVA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K V LG LP+EI F T+ +L ++ L R+ GL+V+D GNY
Sbjct: 121 DEAKAVAQLGAFPLPVEIVPFAYEWTIRSLAQLGCSVQLR-----RQPDEGLYVTDNGNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I D F I P+ +S L +PGV+EHGLFI M D AIIG DG +L
Sbjct: 176 IADCRFQEILRPEELSSRLGTVPGVVEHGLFIGMADQAIIGCRDGSVRIL 225
>gi|254475850|ref|ZP_05089236.1| ribose 5-phosphate isomerase A [Ruegeria sp. R11]
gi|214030093|gb|EEB70928.1| ribose 5-phosphate isomerase A [Ruegeria sp. R11]
Length = 262
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ K AA+RA + V DGM +G+GTGSTA + L + + G R++ +P+S T
Sbjct: 9 DKAKFVAAKRAAEMVEDGMRVGLGTGSTAAWLVRCLGEMVRSEGLRIKGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ R +VI D++
Sbjct: 69 REVGIDIISLDEAKWLDLTIDGADEFDGDLNLIKGGGGALLQEKIVATASDRMVVIADKA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE-ELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG T + ++E + + LR NG FV+D GN+I+
Sbjct: 129 KEVETLGAFPLPVEVIPFGWQTTQALVEETLVAMNVMGRKTTLRMNGDAAFVTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ + IPGV+E+GLFI++ D ++G DG+ V
Sbjct: 189 DLHLNRIGNARQLALVMNQIPGVVENGLFIDICDTVVVGYGDGKVEVRD 237
>gi|311278166|ref|YP_003940397.1| ribose 5-phosphate isomerase [Enterobacter cloacae SCF1]
gi|308747361|gb|ADO47113.1| ribose 5-phosphate isomerase [Enterobacter cloacae SCF1]
Length = 219
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V + + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 RLKSLGITVFDLNEVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARE----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHGLEILDAVALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|114766781|ref|ZP_01445718.1| ribose 5-phosphate isomerase [Pelagibaca bermudensis HTCC2601]
gi|114541038|gb|EAU44095.1| ribose 5-phosphate isomerase [Roseovarius sp. HTCC2601]
Length = 260
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 132/229 (57%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA ++V GM +G+GTGSTA + L +K+ G R + +P+S T
Sbjct: 9 DKAKFVAAKRAAEFVQSGMRVGLGTGSTAAWLVRCLGEKVREEGLRFRGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE DS L LIKG GGALL+EKI+A A+ IVI D +
Sbjct: 69 REVGIEVISLDEAGWLDLTIDGADEFDSELNLIKGGGGALLQEKIVATASDEMIVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG + + L+E L + LR NG +++D GNYI+
Sbjct: 129 KHVETLGAFPLPVEVIPFGWTASQALLEEALVTMDVLGRKTTLRMNGERPYITDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ + IPGV+E+GLFI++ D IIG DG
Sbjct: 189 DLHLSRIGNARQLAMLVNQIPGVVENGLFIDICDRVIIGYGDGRVETRD 237
>gi|110633812|ref|YP_674020.1| ribose-5-phosphate isomerase A [Mesorhizobium sp. BNC1]
gi|110284796|gb|ABG62855.1| ribose-5-phosphate isomerase [Chelativorans sp. BNC1]
Length = 235
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 150/227 (66%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
DA +K AAR A+ YV DGM LG+GTGSTA+EF+ LLA ++++G ++ +P+S T
Sbjct: 3 DAKTLKIEAARVALGYVEDGMKLGIGTGSTAEEFVRLLATRVSSGMKIVGVPTSERTAAL 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
C+ +PL + ++ +DL++DG DE+ L LIKG GGALLREKI+A A+ R IVI DE
Sbjct: 63 CRELSVPLSTLDETPELDLTVDGADEVGPDLTLIKGGGGALLREKIVAAASRRMIVIADE 122
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK VD LG LPIE++ FG+ T A++ A+ GL E+R R G FV+DGG++I+
Sbjct: 123 SKVVDVLGTFPLPIEVNPFGLRATRIAIEAAAARLGLAGEMRTRMAGQEPFVTDGGHFII 182
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
DA FG I P+ ++ L IPGV+EHGLFI + AII +G +
Sbjct: 183 DASFGRIQAPRALAEALNAIPGVVEHGLFIGLAGAAIIAGRNGVRTL 229
>gi|184156201|ref|YP_001844541.1| ribose-5-phosphate isomerase A [Lactobacillus fermentum IFO 3956]
gi|227515261|ref|ZP_03945310.1| ribose-5-phosphate isomerase [Lactobacillus fermentum ATCC 14931]
gi|183227545|dbj|BAG28061.1| ribose 5-phosphate isomerase [Lactobacillus fermentum IFO 3956]
gi|227086363|gb|EEI21675.1| ribose-5-phosphate isomerase [Lactobacillus fermentum ATCC 14931]
Length = 226
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 128/225 (56%), Gaps = 7/225 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K + A++YV DGM +G+GTGST + + L +++ G ++ + +SR T
Sbjct: 1 MDQNELKALVGKEAVKYVEDGMIVGLGTGSTVRFMVDALGERVKNEGLKIVGVTTSRRTT 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
I + ++V VDL+IDG DE+ + + IKG GGALL EK++ A+++ I I
Sbjct: 61 KQATELGITIKDIDEVDHVDLTIDGADEVSNDFQGIKGGGGALLWEKVVNDASTKNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG +P+E+ FG ++ + + R +G +++D NY
Sbjct: 121 DESKLVDKLGDFGVPVEVIPFGAAHVFRKFEKKGY------QPQWRMDGDNRYLTDEKNY 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P+ ++ +L + GV+EHGLF++ V+ I+G DG
Sbjct: 175 IIDLKMGKIDAPKTLAEDLIHTVGVVEHGLFLDRVNEVIVGRQDG 219
>gi|332159597|ref|YP_004424876.1| ribose-5-phosphate isomerase A [Pyrococcus sp. NA2]
gi|331035060|gb|AEC52872.1| ribose-5-phosphate isomerase A [Pyrococcus sp. NA2]
Length = 229
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
M+ +MKR AA+ A+++V D M +G+GTGST F+ L D + G + +P+S
Sbjct: 1 MEIEEMKRIAAKEALKFVEDDMVIGLGTGSTTAYFIKFLGDMVKRGEITDIIGVPTSYQA 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ H IP+ S + V ++D++IDG DE+D +L LIKG G AL EKII + A FIV+
Sbjct: 61 KLLAIEHGIPIASLDQVDAIDVAIDGADEVDPQLNLIKGRGAALTMEKIIEYRAGMFIVL 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE K VD + +PIE+ E + F ELR+ N G V++ G
Sbjct: 121 VDERKLVDYLCQKMPVPIEVIPQAWKAVA----EELAIFNAKAELRMGVNKDGPVVTENG 176
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N+I+DA F I DP + EL IPGV+E+G+F ++ D I+GT +G +
Sbjct: 177 NFIIDAKFPRIDDPLDMEIELNTIPGVVENGIFADIADMVIVGTREGVKKL 227
>gi|300113160|ref|YP_003759735.1| ribose 5-phosphate isomerase [Nitrosococcus watsonii C-113]
gi|299539097|gb|ADJ27414.1| ribose 5-phosphate isomerase [Nitrosococcus watsonii C-113]
Length = 220
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA+ A+++V G+ +GMGTGST F+ LL I + V S +T
Sbjct: 1 MSPDEMKKLAAKAALEHVEPGIIVGMGTGSTVNHFIDLLG-TIKSKIEGAVSSSEASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +IP++ V + L IDG DE + L+LIKG GGAL REKIIA A+ +F+ I D
Sbjct: 60 LKAL-NIPVYELNAVGEIPLYIDGADESNHYLQLIKGGGGALTREKIIAAASKKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK VD LG LP+E+ + + + G R F++D GN I
Sbjct: 119 QSKLVDILGNFPLPVEVIPMARSYVARQIVK----LGGEPVYREG------FITDNGNQI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
+D I +P + G++ NIPGV+ +GLF I+ D I+G+ +G + K
Sbjct: 169 LDTHGLSIMEPAKLEGQINNIPGVVTNGLFAIHPADVLILGSPEGAKTIYPK 220
>gi|218550162|ref|YP_002383953.1| ribose 5-phosphate isomerase [Escherichia fergusonii ATCC 35469]
gi|226734913|sp|B7LPC8|RPIA_ESCF3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|218357703|emb|CAQ90345.1| ribose 5-phosphate isomerase, constitutive [Escherichia fergusonii
ATCC 35469]
gi|325498474|gb|EGC96333.1| ribose 5-phosphate isomerase, constitutive [Escherichia fergusonii
ECD227]
Length = 219
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALG-TMKDQIEGAVSSSDASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSLGITVFDLNDVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAKKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT++G +++
Sbjct: 169 LDVHGMEILDPVAMENAINAIPGVVTVGLFANRGADVALIGTAEGVKTIVK 219
>gi|154486790|ref|ZP_02028197.1| hypothetical protein BIFADO_00616 [Bifidobacterium adolescentis
L2-32]
gi|154084653|gb|EDN83698.1| hypothetical protein BIFADO_00616 [Bifidobacterium adolescentis
L2-32]
Length = 288
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + +GM G+GTGST + + L ++ G + +SR
Sbjct: 57 MDKAQQDALKKAAGIEAAKLIQNGMIAGLGTGSTVRFLVDELGRRVKEEGLEFTGVTTSR 116
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 117 RTQEQAEGYGIKIVNIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV 176
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL NG +D
Sbjct: 177 WIVDESKVVDTIGKFPLPVEVIPFGAGQVVKKFE----AKGYKPVLRLDANGE-PVRTDE 231
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NY+VD I PQ ++ +L GV+EHGLF+NMVD I+G +G
Sbjct: 232 NNYVVDLHLERIDHPQELAQDLITTVGVVEHGLFLNMVDQVIVGDPNG 279
>gi|22298816|ref|NP_682063.1| ribose-5-phosphate isomerase A [Thermosynechococcus elongatus BP-1]
gi|30173268|sp|Q8DJF2|RPIA_THEEB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|22294997|dbj|BAC08825.1| ribose 5-phosphate isomerase [Thermosynechococcus elongatus BP-1]
Length = 236
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 11/237 (4%)
Query: 1 MDAL---QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSS 55
M QMK+ A+ A V GM +G+GTGST + L D++ G + +P+S
Sbjct: 1 MSDDAVKQMKQVVAKAAADRVQSGMVVGLGTGSTTAFVIQFLGDRLRKGELSNIVGVPTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
K + IPL + +DV +D++IDG DE+D LIKG G A REKI+ A +F
Sbjct: 61 FQASVLAKKYGIPLVTLDDVEKLDIAIDGADEVDPAKNLIKGGGAAHTREKIVDSLAEQF 120
Query: 116 IVIGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
+V+ D SK V +P+E+ F V ALK G ELR+ G V+
Sbjct: 121 LVVVDSSKLVQKLGSTFPVPVEVLPFAVAPVTRALK----ALGGEPELRMGVKKDGPVVT 176
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS-DGECLVLQ 230
D GN+++D F IPDP + + NIPGV+E+GLF+N+ D ++G DG+ V +
Sbjct: 177 DQGNFVLDVRFDDIPDPAELEKAINNIPGVVENGLFVNVADVILVGEIVDGQPQVRE 233
>gi|229030473|ref|ZP_04186512.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH1271]
gi|228730844|gb|EEL81785.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH1271]
Length = 221
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 91/225 (40%), Positives = 132/225 (58%), Gaps = 7/225 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+K+ A A +V DGMT+G+GTGST + L +++ G Q +P+S+ TE K
Sbjct: 3 NLKQLAGEYAANFVKDGMTVGLGTGSTVYWTIKKLGERVKEGLSFQAVPTSKETEALAKQ 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+IPL S DV ++L+IDG DEID+ L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 63 LNIPLISLNDVQILELTIDGADEIDANLQLIKGGGGALLREKIVASSSKELIIIADESKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V +LG LP+EI F +T ++ + + LR + F++D N I+D
Sbjct: 123 VTYLGTFPLPVEITPFSWKQTERKIRSLGC------QTTLRLKNNETFITDNNNVIIDCV 176
Query: 185 FG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLF+N+ AIIGT +G +
Sbjct: 177 FPQNITNPANLHTKLKMITGVVETGLFVNIASKAIIGTENGIKEL 221
>gi|229167382|ref|ZP_04295120.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH621]
gi|228615944|gb|EEK73031.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH621]
Length = 221
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 97/225 (43%), Positives = 130/225 (57%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGMT+G+GTGST + L ++ G +Q P+S+ TE K
Sbjct: 2 MNLKQLAGEYAAGFVRDGMTIGLGTGSTVYWTIQKLGHRVQEGLSIQAAPTSKETEVLAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S ++ +DL+IDG DEI++ L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLSIPLISLNEIDILDLTIDGADEINNDLQLIKGGGGALLREKIVATSSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T ++ + E RLR G F++D GN I+D
Sbjct: 122 LVSHLGTFPLPIEIIPFSWKQTEKRIQSLGC------ETRLRMKDGGPFITDNGNLIIDC 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
F I +P EL I GV+E GLFINM AIIGT +G
Sbjct: 176 IFPNKILNPNDTHTELKMITGVVETGLFINMTSKAIIGTKNGIKE 220
>gi|209885649|ref|YP_002289506.1| ribose 5-phosphate isomerase A [Oligotropha carboxidovorans OM5]
gi|229470489|sp|B6JE08|RPIA_OLICO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|209873845|gb|ACI93641.1| ribose 5-phosphate isomerase A [Oligotropha carboxidovorans OM5]
Length = 236
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 107/229 (46%), Positives = 150/229 (65%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++KR AA RA++YV DGM LG+GTGSTAK F+ LL +++ G RV +P+S T
Sbjct: 1 MSKEELKRAAAARALEYVSDGMQLGLGTGSTAKHFVELLGERVRAGLRVVGVPTSEGTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL + +DV +DL++DG DEI L +IKG GGALLREKI+A A++R +VI D
Sbjct: 61 DAERCGVPLTTLDDVDHLDLTVDGADEIAPSLDVIKGGGGALLREKIVAAASTRMVVISD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
+SK V+ LGR LP+E+ FG+ T AL + G+ E+ LR+ G FV+DGG++
Sbjct: 121 DSKWVETLGRFPLPVEVIPFGLGATRRALATAFAEAGVTGEITLRQGPDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+DA G IP+P ++ L IPGV+EHGLFI + AI+ S G +V
Sbjct: 181 ILDAHLGRIPEPPRLAALLSAIPGVVEHGLFIGLAKTAILAGSQGIRIV 229
>gi|84500016|ref|ZP_00998282.1| ribose 5-phosphate isomerase [Oceanicola batsensis HTCC2597]
gi|84391950|gb|EAQ04218.1| ribose 5-phosphate isomerase [Oceanicola batsensis HTCC2597]
Length = 262
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 95/229 (41%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+R++ +V DGM +G+GTGSTA + L + + G R++ +P+S T
Sbjct: 9 DKAKFVAAKRSVDFVEDGMRVGLGTGSTAAWMVRCLGELVREDGLRIKGVPTSTRTAQLA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE DS L LIKG GGALL+EKI+A A+ + IVI D
Sbjct: 69 REVGIEVISLDEAKWLDLTIDGADEFDSSLNLIKGGGGALLQEKIVATASDQMIVIADIG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K+VD LG LPIE+ FG T + ++E L LR NG FV+D GNYI+
Sbjct: 129 KQVDALGAFPLPIEVIPFGWQTTQALVEETLISMDVLGRNSTLRMNGQRPFVTDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I D + ++ L +PGV+E+GLFI++ DC I+G DG V
Sbjct: 189 DLHLNRIGDARQLAMVLNQMPGVVENGLFIDICDCVIVGFGDGRVEVRD 237
>gi|212223314|ref|YP_002306550.1| ribose-5-phosphate isomerase A [Thermococcus onnurineus NA1]
gi|212008271|gb|ACJ15653.1| ribose 5-phosphate isomerase [Thermococcus onnurineus NA1]
Length = 227
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 126/227 (55%), Gaps = 7/227 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSSRNTENF 61
++KR A+ A++++ D M +G+GTGST F+ L I V +P+S
Sbjct: 2 EELKRAVAKEALKFIEDDMVVGLGTGSTTAYFIEYLGKLIMEEELEDVYGVPTSYQARLL 61
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ +P+ + ++V ++D+++DG DE+D L LIKG G AL EKII + A F+V+ DE
Sbjct: 62 ALEYGVPVVNLDEVDAIDIAVDGADEVDPYLNLIKGRGAALTMEKIIEYRAGTFLVLVDE 121
Query: 122 SKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ + +PIE+ A+ E F ELR+ G V++ GN+I
Sbjct: 122 SKLVERLGQKMPVPIEVIPAAW----RAIAEELEVFNATAELRMASKKDGPVVTENGNFI 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+DA F I DP + EL NIPGV+E+G+F ++ D ++GT +G
Sbjct: 178 LDARFHRIDDPLDLEIELNNIPGVVENGIFADIADIVLVGTREGVKR 224
>gi|242398883|ref|YP_002994307.1| Ribose-5-phosphate isomerase A [Thermococcus sibiricus MM 739]
gi|242265276|gb|ACS89958.1| Ribose-5-phosphate isomerase A [Thermococcus sibiricus MM 739]
Length = 227
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSSRNTENF 61
++K+ AA+ A++Y+ D M +G+GTGST F+ +L K+ V IP+S +
Sbjct: 2 EELKKLAAKEALRYIDDDMIIGLGTGSTTAYFIQMLGKKLMTEELEDVYGIPTSHQSRLL 61
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
IP+ + ++V ++D+++DG DE+D L LIKG G AL EKII + A FIV+ DE
Sbjct: 62 ALESGIPVVTLDEVDAIDIAVDGADEVDPHLNLIKGRGAALTMEKIIEYRAGTFIVLVDE 121
Query: 122 SKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ R +PIE+ A+KE F ELR+ G ++D GN+I
Sbjct: 122 SKLVEYLGQRVPVPIEVIPAAW----RAIKEELEVFNATAELRMGVKKDGPVITDNGNFI 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA F I DP + EL NIPGV+E+G+F ++ D ++GT +G +
Sbjct: 178 LDAKFIKIEDPLDMEIELNNIPGVVENGIFADIADIILVGTKEGVKKL 225
>gi|254784623|ref|YP_003072051.1| ribose-5-phosphate isomerase A [Teredinibacter turnerae T7901]
gi|259494155|sp|C5BMC8|RPIA_TERTT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|237686048|gb|ACR13312.1| ribose 5-phosphate isomerase A [Teredinibacter turnerae T7901]
Length = 225
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ ++K+ A+ A+ Y+ LG+GTGSTA F+ LA G + SS
Sbjct: 1 MNQQELKQAVAQAAVDYILPKLESDTILGIGTGSTAALFIDALAQH--KGLFQGAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H IP++ +V + +DG DE ++RL+LIKG G AL REKI+ A F+
Sbjct: 59 ASARQLEGHGIPVYDLNEVDRLVAYVDGADEANARLQLIKGGGAALTREKIVTACADEFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V LG+ LP+E+ + G + E R +D
Sbjct: 119 CIADESKWVPVLGKFPLPVEVIPMARSFVARE----LVKMGGSPEHRHG------CTTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
GN+I+D I P + + IPGV+ +GLF + D ++GT+DG +
Sbjct: 169 GNHILDVHGLEIHQPAELESAINQIPGVVTNGLFALRPADVLLLGTNDGVKTL 221
>gi|23200281|pdb|1KS2|A Chain A, Crystal Structure Analysis Of The Rpia, Structural
Genomics, Protein Ec1268.
gi|23200282|pdb|1KS2|B Chain B, Crystal Structure Analysis Of The Rpia, Structural
Genomics, Protein Ec1268
Length = 219
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGT--XKGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ + IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHXQXIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPXARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + IPGV+ GLF N D A+IGT DG +++
Sbjct: 169 LDVHGXEILDPIAXENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|126729285|ref|ZP_01745099.1| ribose 5-phosphate isomerase [Sagittula stellata E-37]
gi|126710275|gb|EBA09327.1| ribose 5-phosphate isomerase [Sagittula stellata E-37]
Length = 260
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA ++V GM +G+GTGSTA + L + + G R + +P+S T
Sbjct: 9 DKAKFVAAKRAAEFVESGMRVGLGTGSTAAWLVRCLGELVREEGLRFKGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D +
Sbjct: 69 RDVGIEVISLDEAKWLDLTIDGADEFDEELSLIKGGGGALLQEKIVATASDQMVVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG +L+ ++E+ + + LR NG +++D N+I+
Sbjct: 129 KEVGHLGAFPLPVEVIPFGWQTSLALIEEMLISMDVMGRKATLRMNGDRPYITDEANHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ +S L IPGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLHLTRIGNPRQLSMVLNQIPGVVENGLFIDICDKVVIGHGDGRVEVRD 237
>gi|149200762|ref|ZP_01877737.1| ribose 5-phosphate isomerase [Roseovarius sp. TM1035]
gi|149145095|gb|EDM33121.1| ribose 5-phosphate isomerase [Roseovarius sp. TM1035]
Length = 262
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 134/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFC 62
+ K AA+R++ +V DGM +G+GTGSTA + L + + G R++ +P+S T
Sbjct: 9 DKAKFVAAKRSVDFVEDGMRVGLGTGSTAAWMVRCLGELVREGGLRIRGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE DS L LIKG GGALL+EKI+A A+ + IVI D
Sbjct: 69 REVGIEVISLDEAKWLDLTIDGADEFDSNLNLIKGGGGALLQEKIVATASDQMIVIADVG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG T S ++E+ L + LR NG+ F++D GNYI+
Sbjct: 129 KEVETLGAFPLPVEVIPFGWQTTKSLVEELLINMDVLGRDATLRMNGARPFITDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D G I +S L +PGV+E+GLF+++ D I+G DG
Sbjct: 189 DLHLGRIGAAHQLSMALNQMPGVVENGLFLDICDVVILGYGDGRVETRD 237
>gi|192973062|gb|ACF06961.1| ribose 5-phosphate isomerase [uncultured Roseobacter sp.]
Length = 239
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 93/227 (40%), Positives = 137/227 (60%), Gaps = 2/227 (0%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENF 61
A Q K AA+RA++ V DGM LG+GTGSTA + LA ++ G R+Q +P+S T +
Sbjct: 8 ADQAKYVAAKRAVELVEDGMKLGLGTGSTAAWMVRCLAQRVKAEGLRIQGVPTSTRTADL 67
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + + + + +D++IDG DE DS L LIKG GGALL+EKI+A A+ R IVI D
Sbjct: 68 ARELGLEVVTLDQAGHLDITIDGTDEFDSALNLIKGGGGALLQEKIVASASDRMIVIADF 127
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE-ELRLRRNGSGLFVSDGGNYI 180
K V LG+ LP+E+ FG+ + + + + GL ++ R+ G FV+D GN+I
Sbjct: 128 DKHVPQLGKFPLPVEVLGFGLASSRDHIARLLADHGLAGCDITTRKQGDAPFVTDEGNFI 187
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+D IPD ++ L +PGV+E+GLFI++ D I+G SDG
Sbjct: 188 LDLHLAQIPDAPALAIALNQVPGVVENGLFIDICDRVILGASDGRIE 234
>gi|114569523|ref|YP_756203.1| ribose-5-phosphate isomerase A [Maricaulis maris MCS10]
gi|122316416|sp|Q0AR22|RPIA_MARMM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|114339985|gb|ABI65265.1| ribose-5-phosphate isomerase [Maricaulis maris MCS10]
Length = 233
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 106/233 (45%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M AL+ K AA A+ Y+ GMTLG+G+GSTA+ F+ LL +KI +G V+ +P+S+ T
Sbjct: 1 MTALRQKTLAAAAALDYIESGMTLGLGSGSTAEIFLRLLGEKIKDGLDVRGVPTSQRTAQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL + V+++ ++IDG DE+D R +LIKG G LLREKIIAHA+ IV+ D
Sbjct: 61 IAAENGVPLIDVDHVNNIAITIDGADEVDGRFQLIKGGGACLLREKIIAHASDLMIVMVD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLN-EELRLRRNGSG--LFVSDGG 177
ESK V LG+ LP+E+D+FG + T S + E G+ +++LRR G G V+DGG
Sbjct: 121 ESKLVATLGKFPLPVEVDRFGFSLTASQVYEALRRAGIKSPDVQLRRKGDGLEPLVTDGG 180
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
NYI+D IPD + L IPGV+EHGLFIN+ I+G DGE V++
Sbjct: 181 NYILDCACEAIPDAGAVDRALKAIPGVVEHGLFINLARVVIVG-EDGEARVME 232
>gi|254441728|ref|ZP_05055221.1| ribose 5-phosphate isomerase A [Octadecabacter antarcticus 307]
gi|198251806|gb|EDY76121.1| ribose 5-phosphate isomerase A [Octadecabacter antarcticus 307]
Length = 262
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFC 62
+ K AA++A QYV DGM +G+GTGSTA + L + + +G +++ +P+S T
Sbjct: 9 DKAKFVAAKQATQYVQDGMKVGLGTGSTAAWLVKCLGEMVEKDGLKIKGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + IVI D S
Sbjct: 69 RDVGIDVISLDEAKWLDLTIDGTDEYDGNLNLIKGGGGALLQEKIVATASDQMIVIADAS 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K+V+ LG LPIE+ FG T + ++E L ++ LR NG + +D GN+I+
Sbjct: 129 KQVETLGHFPLPIEVIPFGWQTTKTLVEETLISMDVLGRQVSLRMNGDAPYYTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + S + IPGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLHLNRIGNSRQFSLVINQIPGVVENGLFIDICDIVVIGYGDGRVKVRD 237
>gi|75675414|ref|YP_317835.1| ribose-5-phosphate isomerase A [Nitrobacter winogradskyi Nb-255]
gi|123732083|sp|Q3STA8|RPIA_NITWN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|74420284|gb|ABA04483.1| ribose-5-phosphate isomerase [Nitrobacter winogradskyi Nb-255]
Length = 232
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 108/232 (46%), Positives = 153/232 (65%), Gaps = 1/232 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +KR AA RA++YV DGM LG+GTGSTAK F+ LL +++ +G +V +P+S T
Sbjct: 1 MTMDALKRQAAARALEYVEDGMRLGLGTGSTAKHFVELLGERVRDGLKVVGVPTSEATRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL + +D+ +DL++DG DEID L L KG GGALLREKI+A A+ R IVI D
Sbjct: 61 DAERCGVPLTTLDDLDRLDLTVDGADEIDPDLNLTKGGGGALLREKIVAAASDRMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
E+K V LGR LPIE+ FG+ T A+ EV + G++ EL +R+ G FV+DGG++
Sbjct: 121 ETKWVAGLGRFPLPIEVIPFGLAATRRAITEVFAKAGVSGELAVRKRPDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DA G IPD ++G L IPGV+EHGLFI + A++ ++G +V ++
Sbjct: 181 IFDAHLGQIPDASYLAGLLNPIPGVVEHGLFIGLARVAMLAGAEGIRIVERR 232
>gi|170725317|ref|YP_001759343.1| ribose-5-phosphate isomerase A [Shewanella woodyi ATCC 51908]
gi|238688659|sp|B1KFT2|RPIA_SHEWM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|169810664|gb|ACA85248.1| ribose 5-phosphate isomerase [Shewanella woodyi ATCC 51908]
Length = 218
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A + SS +
Sbjct: 1 MTQDEMKKAAGWAALEYVEKDSIVGVGTGSTVNHFIDALATMKAE--IEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ V + + +DG DEI++ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 KMKDLGIPVFDLNSVDELSVYVDGADEINAHMDMIKGGGAALTREKIVAAVADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 NTKQVDVLGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------VITDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I +P+ + ++ I GV+ +GLF N D ++G+ DG +
Sbjct: 169 LDVYNMKIVNPKELEQQINKIVGVVTNGLFANRGADVLLVGSPDGVKTL 217
>gi|298290904|ref|YP_003692843.1| ribose 5-phosphate isomerase [Starkeya novella DSM 506]
gi|296927415|gb|ADH88224.1| ribose 5-phosphate isomerase [Starkeya novella DSM 506]
Length = 234
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 104/230 (45%), Positives = 140/230 (60%), Gaps = 2/230 (0%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
A +KR AA RA++YV GM LG+GTGSTAK F+ LLA+++ G V +P+S T
Sbjct: 5 AETLKRQAAARALEYVRSGMKLGLGTGSTAKHFVELLAERVGEGLEVVGVPTSEVTRAQA 64
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ ++PL + ++ +DL IDG DEI L LIKG GGALLREKI+A AA + IVI D S
Sbjct: 65 ESLNVPLGTLDEHPVLDLCIDGADEIGPDLTLIKGGGGALLREKIVASAAQQMIVIADAS 124
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIV 181
K+VD LG LPIE+ FGV + A G L LRR G +FV+D G+ I+
Sbjct: 125 KKVDRLGTFPLPIEVVDFGVAAIRRGIDRAARAAGCEGLLTLRRRPDGHVFVTDQGHLIL 184
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
DA + I DP ++ L +PGV+EHGLFIN+ I+ + G V+ +
Sbjct: 185 DAAYHSITDPAALAARLSEVPGVVEHGLFINLASRVILAGA-GGVSVIDR 233
>gi|317049397|ref|YP_004117045.1| ribose 5-phosphate isomerase [Pantoea sp. At-9b]
gi|316951014|gb|ADU70489.1| ribose 5-phosphate isomerase [Pantoea sp. At-9b]
Length = 219
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 77/231 (33%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L I + V S +T+
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSEASTQK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V S+ + +DG DEI+ +++IKG G AL REKI++ A +FI I D
Sbjct: 60 LKSL-GIHVFDLNEVDSLSVYVDGADEINPHMQMIKGGGAALTREKIVSAVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ASKEVDVLGHFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + +PGV+ GLF D A+IGT+DG + +
Sbjct: 169 LDVHNLRILDPIALEKAINALPGVVTVGLFAARGADVALIGTADGVKTITK 219
>gi|254454643|ref|ZP_05068080.1| ribose 5-phosphate isomerase A [Octadecabacter antarcticus 238]
gi|198269049|gb|EDY93319.1| ribose 5-phosphate isomerase A [Octadecabacter antarcticus 238]
Length = 262
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFC 62
+ K AA++A QYV DGM +G+GTGSTA + L + + G +++ +P+S T
Sbjct: 9 DKAKFVAAKQATQYVQDGMKVGLGTGSTAAWLVKCLGEMVEKEGLKIKGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + IVI D S
Sbjct: 69 RDVGIEVISLDEAKWLDLTIDGTDEYDGNLNLIKGGGGALLQEKIVATASDQMIVIADAS 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG T + ++E L ++ LR NG + +D GN+I+
Sbjct: 129 KHVETLGHFPLPIEVIPFGWQTTKTLVEETLIGLDVLGRQVSLRMNGDAPYYTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + S + IPGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLHLNRIGNARQFSLVINQIPGVVENGLFIDICDIVVIGYGDGRVEVRD 237
>gi|228953126|ref|ZP_04115185.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228806541|gb|EEM53101.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 220
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR +++D N I+D
Sbjct: 121 FVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNDETYITDNNNLIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|324115068|gb|EGC09033.1| ribose 5-phosphate isomerase A [Escherichia fergusonii B253]
Length = 219
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALG-TMKDQIEGAVSSSDASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSLGITVFDLNDVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAKKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + IPGV+ GLF N D A+IGT++G +++
Sbjct: 169 LDVHGMEILDPVAMENAINVIPGVVTVGLFANRGADVALIGTAEGVKTIVK 219
>gi|229070271|ref|ZP_04203521.1| Ribose-5-phosphate isomerase A [Bacillus cereus F65185]
gi|228712835|gb|EEL64760.1| Ribose-5-phosphate isomerase A [Bacillus cereus F65185]
Length = 220
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR +++D N I+D
Sbjct: 121 FVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNDETYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|92117033|ref|YP_576762.1| ribose-5-phosphate isomerase A [Nitrobacter hamburgensis X14]
gi|123387133|sp|Q1QN95|RPIA_NITHX RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|91799927|gb|ABE62302.1| ribose-5-phosphate isomerase [Nitrobacter hamburgensis X14]
Length = 232
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 108/232 (46%), Positives = 152/232 (65%), Gaps = 2/232 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +KR AA RA++YV DGM LG+GTGSTAK F+ LL +++ +G +V +P+S T
Sbjct: 1 MTLDALKRQAAARALEYVEDGMRLGLGTGSTAKHFVELLGERVRDGLKVVGVPTSEATRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + +D+ +DL++DG DEID L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 61 DAERCGIPLTTLDDLDRLDLTVDGADEIDPDLNLIKGGGGALLREKIVAAASERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
E+K V LGR LPIE+ FG+ T A+ E + G + ++ +R+ GL FV+DGG++
Sbjct: 121 ETKWVAGLGRFPLPIEVIPFGLAATRRAIAEAFTKAGASGQMVVRKGPDGLAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DA G IPD ++G L IPGV+EHGLFI + A++ + G V+++
Sbjct: 181 IFDAHLGQIPDASHLAGLLNPIPGVVEHGLFIGLARVAMLAGAQG-IRVVER 231
>gi|228908536|ref|ZP_04072376.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis IBL 200]
gi|228851089|gb|EEM95903.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis IBL 200]
Length = 220
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEI S L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIGSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFSNHISNPAHLHTQLKMITGVVETGLFISMTSKAIIGTKNGIKEL 220
>gi|77463930|ref|YP_353434.1| ribose-5-phosphate isomerase A [Rhodobacter sphaeroides 2.4.1]
gi|123771670|sp|Q3J101|RPIA_RHOS4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|77388348|gb|ABA79533.1| ribose-5-phosphate isomerase [Rhodobacter sphaeroides 2.4.1]
Length = 262
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 130/229 (56%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
K AARRA+ V DGM LG+GTGSTA + LA+++ G RVQ +P+S T
Sbjct: 9 DTAKFAAARRAVDLVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + ++ +DL+IDG DE D+ LIKG G ALL+EKI+A A+ R +VI D +
Sbjct: 69 RALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG T ++E L E+ LR +G ++D NYI+
Sbjct: 129 KEVAHLGAFPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDAPLLTDEKNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ ++ L I GV+E+GLFI++ D ++G DG +
Sbjct: 189 DLHLKRIGEPRPLALALNQIAGVVENGLFIDICDTVVVGHGDGRVSLRD 237
>gi|197285883|ref|YP_002151755.1| ribose 5-phosphate isomerase A [Proteus mirabilis HI4320]
gi|227356384|ref|ZP_03840772.1| ribose 5-phosphate isomerase A [Proteus mirabilis ATCC 29906]
gi|238693210|sp|B4F0Q0|RPIA_PROMH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|194683370|emb|CAR44077.1| ribose 5-phosphate isomerase A [Proteus mirabilis HI4320]
gi|227163494|gb|EEI48415.1| ribose 5-phosphate isomerase A [Proteus mirabilis ATCC 29906]
Length = 218
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSEASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + IP+ +V S+D+ +DG DEI+ ++++IKG G AL REKIIA A F+ I D
Sbjct: 59 KLKSYGIPVFDCNEVDSLDIYVDGADEINHQMQMIKGGGAALTREKIIAAVAKTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ESKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYREN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I +P + ++ +I GV+ GLF N D ++GTS+G +
Sbjct: 169 LDVYNLTILNPIELENKINSIAGVVTVGLFANRGADIVLMGTSEGVKTI 217
>gi|163746069|ref|ZP_02153428.1| ribose 5-phosphate isomerase [Oceanibulbus indolifex HEL-45]
gi|161380814|gb|EDQ05224.1| ribose 5-phosphate isomerase [Oceanibulbus indolifex HEL-45]
Length = 262
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA +V DGM +G+GTGSTA + L + + + G R++ +P+S T
Sbjct: 9 DKAKFVAAKRACDFVEDGMRVGLGTGSTAAWLVRCLGEMVRDDGLRIKGVPTSSRTAQLA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D
Sbjct: 69 RDVGIEVISLDEAKWLDLTIDGADEFDGDLNLIKGGGGALLQEKIVATASDQMVVIADIG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LPIE+ FG T + ++E L LR NG F++D GNYI+
Sbjct: 129 KEVQHLGAFPLPIEVIPFGWQTTQALVEETLISMDVLGRNSTLRMNGEVPFITDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ L +PGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLRLNRIGNARQLALVLNQMPGVVENGLFIDICDAVVIGYGDGRVEVRD 237
>gi|299133604|ref|ZP_07026798.1| ribose 5-phosphate isomerase [Afipia sp. 1NLS2]
gi|298591440|gb|EFI51641.1| ribose 5-phosphate isomerase [Afipia sp. 1NLS2]
Length = 236
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 109/229 (47%), Positives = 151/229 (65%), Gaps = 1/229 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++KR AA RA++YV +GM LG+GTGSTAK F+ LL +++ G RV +P+S T
Sbjct: 1 MSKEELKRAAAARALEYVENGMQLGLGTGSTAKHFVELLGERVRGGLRVIGVPTSEATRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL + +++ +DL++DG DEID L LIKG GGALLREKI+A A++R +VI D
Sbjct: 61 DAERCGVPLTTLDEIDRLDLTVDGADEIDPSLNLIKGGGGALLREKIVAAASARMVVISD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
+SK VD LGR LP+E+ FG+ T AL + G+ E+ LR+ G FV+DGG++
Sbjct: 121 DSKWVDTLGRFPLPVEVIPFGLGATRHALAAAFAQAGVAGEISLRQGKDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
IVDA G IPDP ++ L IPGV+EHGLFI + AI+ S G +V
Sbjct: 181 IVDAHLGRIPDPPRLAALLSAIPGVVEHGLFIGLAKTAILAGSQGLRIV 229
>gi|301301415|ref|ZP_07207553.1| ribose 5-phosphate isomerase A [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300215398|gb|ADJ79811.1| Ribose 5-phosphate isomerase [Lactobacillus salivarius CECT 5713]
gi|300850967|gb|EFK78713.1| ribose 5-phosphate isomerase A [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 227
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
M+ ++K+ +A++++ DGM +G+GTGST K + L ++ G + + +S T
Sbjct: 1 MNQDELKQLVGTKAVEWIKDGMIVGLGTGSTVKYMVDALGKRVNEEGLNIVGVTTSIRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K I + ++V +DL+IDG DEI S + IKG G ALL EKI+A +++ + I
Sbjct: 61 EQAKSLGIVIKDIDEVDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNKNMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG+ LP+E+ +G +E GLN E R +GS L +D NY
Sbjct: 121 DESKMVDDLGQFPLPVEVIPYGSGTVFKRFEEK----GLNPEFRKNEDGS-LLHTDSDNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+D G I +P+ + L N GV+EHGLF+++V+ I+G DG VL+
Sbjct: 176 IIDLHLGKIENPKELGDYLINQVGVVEHGLFLDIVNTVIVGRQDG-PEVLE 225
>gi|229079982|ref|ZP_04212513.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock4-2]
gi|228703361|gb|EEL55816.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock4-2]
Length = 220
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR +++D N I+D
Sbjct: 121 FVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNDKTYITDNNNLIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|77166125|ref|YP_344650.1| ribose-5-phosphate isomerase A [Nitrosococcus oceani ATCC 19707]
gi|254435176|ref|ZP_05048683.1| ribose 5-phosphate isomerase A [Nitrosococcus oceani AFC27]
gi|123593471|sp|Q3J7S6|RPIA_NITOC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|76884439|gb|ABA59120.1| ribose-5-phosphate isomerase [Nitrosococcus oceani ATCC 19707]
gi|207088287|gb|EDZ65559.1| ribose 5-phosphate isomerase A [Nitrosococcus oceani AFC27]
Length = 220
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 121/232 (52%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA+ A+++V G +G GTGST F+ LL I V S +T
Sbjct: 1 MSPDEMKKLAAKAALEHVEPGTIVGTGTGSTVNHFIDLLG-TIKGKIEGAVSSSEASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +IP++ V + L IDG DE + L+LIKG GGAL REKIIA A+ +F+ I D
Sbjct: 60 LKAL-NIPVYELNAVGEIPLYIDGADESNHYLQLIKGGGGALTREKIIAAASKKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK VD LG LP+E+ + + + G R F++D GN I
Sbjct: 119 QSKLVDILGTFPLPVEVIPMARSYVARQIVK----LGGEPVYREG------FITDNGNQI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
+D I +P + G+L NIPGV+ +GLF I D I+G+ +G + K
Sbjct: 169 LDTHGLSIMEPAKLEGQLNNIPGVVTNGLFAIYPADVLILGSPEGVKTIYPK 220
>gi|42781879|ref|NP_979126.1| ribose-5-phosphate isomerase A [Bacillus cereus ATCC 10987]
gi|222096294|ref|YP_002530351.1| ribose-5-phosphate isomerase a [Bacillus cereus Q1]
gi|67461470|sp|Q736S8|RPIA_BACC1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|42737803|gb|AAS41734.1| ribose 5-phosphate isomerase [Bacillus cereus ATCC 10987]
gi|221240352|gb|ACM13062.1| ribose 5-phosphate isomerase [Bacillus cereus Q1]
Length = 220
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 131/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAATFVKDGMKIGLGTGSTVYWTIEKLGERVKEGLSFQAVPTSKETEVLAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S D+ S+DL+IDG DEIDS L LIKG GGALLREKI+A ++ ++I DESK
Sbjct: 61 QLNIPLISLNDIQSLDLTIDGADEIDSNLHLIKGGGGALLREKIVASSSKELLIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T S ++ + + LR + F++D N I+D
Sbjct: 121 LVTHLGTFPLPVEIIPFSWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 174
Query: 184 FFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 VFPHNITNPANLHNHLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|85704116|ref|ZP_01035219.1| ribose 5-phosphate isomerase [Roseovarius sp. 217]
gi|85671436|gb|EAQ26294.1| ribose 5-phosphate isomerase [Roseovarius sp. 217]
Length = 268
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFC 62
+ K AA+R++ +V DGM +G+GTGSTA + L + + G R++ +P+S T
Sbjct: 15 DKAKFVAAKRSVDFVEDGMRVGLGTGSTAAWMVRCLGEMVREGGLRIRGVPTSTRTAELA 74
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE DS L LIKG GGALL+EKI+A A+ + IVI D
Sbjct: 75 REVGIEVISLDEAKWLDLTIDGADEFDSNLNLIKGGGGALLQEKIVATASDQMIVIADVG 134
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG T S ++E+ L LR NG+ F++D GNYI+
Sbjct: 135 KEVETLGAFPLPVEVIPFGWQTTKSLVEELLINMDVLGRNTSLRMNGARPFITDEGNYIL 194
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D G I +S L +PGV+E+GLF+++ D I+G DG
Sbjct: 195 DLHLGRIGAAHQLSMALNQMPGVVENGLFLDICDVVILGYGDGRVETRD 243
>gi|332558804|ref|ZP_08413126.1| ribose-5-phosphate isomerase A [Rhodobacter sphaeroides WS8N]
gi|332276516|gb|EGJ21831.1| ribose-5-phosphate isomerase A [Rhodobacter sphaeroides WS8N]
Length = 262
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
K AARRA+ V DGM LG+GTGSTA + LA+++ G RVQ +P+S T
Sbjct: 9 DTAKFAAARRAVDLVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + ++ +DL+IDG DE D+ LIKG G ALL+EKI+A A+ R +VI D +
Sbjct: 69 RALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG T ++E L E+ LR +G ++D NYI+
Sbjct: 129 KEVAHLGAFPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDAPLLTDEKNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ + L I GV+E+GLFI++ D ++G DG +
Sbjct: 189 DLHLKRIGEPRQLGLALNQIAGVVENGLFIDICDTVVVGHGDGRVSLRD 237
>gi|126462765|ref|YP_001043879.1| ribose-5-phosphate isomerase A [Rhodobacter sphaeroides ATCC 17029]
gi|166229233|sp|A3PL91|RPIA_RHOS1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|126104429|gb|ABN77107.1| ribose-5-phosphate isomerase [Rhodobacter sphaeroides ATCC 17029]
Length = 262
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
K AARRA+ V DGM LG+GTGSTA + LA+++ G RVQ +P+S T
Sbjct: 9 DTAKFAAARRAVDLVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + ++ +DL+IDG DE D+ LIKG G ALL+EKI+A A+ R +VI D +
Sbjct: 69 RALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG T ++E L E+ LR +G ++D NYI+
Sbjct: 129 KEVAHLGAFPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDAPLLTDEKNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ + L I GV+E+GLFI++ D ++G DG +
Sbjct: 189 DLHLKRIGEPRQLGLALNQIAGVVENGLFIDICDTVVVGHGDGRVSLRD 237
>gi|119944374|ref|YP_942054.1| ribose 5-phosphate isomerase [Psychromonas ingrahamii 37]
gi|166229232|sp|A1SSJ0|RPIA_PSYIN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|119862978|gb|ABM02455.1| ribose-5-phosphate isomerase [Psychromonas ingrahamii 37]
Length = 218
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA A++YV +G+GTGST F+ LA I + + V S +T
Sbjct: 1 MTQDEMKKAAAYAALEYVQPDSIVGVGTGSTVTHFIDALA-TIKDLIKGAVSSSDESTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +VS + + +DG DEI+ +IKG G AL REKII+ A +FI I D
Sbjct: 60 LQ-SYGIDVFDLNEVSELSIYVDGADEINPYNHMIKGGGAALTREKIISAVAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LPIE+ + G + R V+D GN I
Sbjct: 119 NTKNVDILGDFPLPIEVIPMARSYVARE----LVKLGGDPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + ++ I GV+ +GLF N D ++GT +G +
Sbjct: 169 LDVHNLKIAEPLKLEAQINAIVGVVTNGLFANRAADVVLVGTPEGVKTL 217
>gi|229179077|ref|ZP_04306434.1| Ribose-5-phosphate isomerase A [Bacillus cereus 172560W]
gi|229190890|ref|ZP_04317881.1| Ribose-5-phosphate isomerase A [Bacillus cereus ATCC 10876]
gi|228592558|gb|EEK50386.1| Ribose-5-phosphate isomerase A [Bacillus cereus ATCC 10876]
gi|228604445|gb|EEK61909.1| Ribose-5-phosphate isomerase A [Bacillus cereus 172560W]
Length = 220
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAH 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLLSLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|90962779|ref|YP_536694.1| ribose-5-phosphate isomerase A [Lactobacillus salivarius UCC118]
gi|90821973|gb|ABE00611.1| Ribose 5-phosphate isomerase [Lactobacillus salivarius UCC118]
Length = 227
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
M+ ++K+ +A++++ DGM +G+GTGST K + L ++ G + + +S T
Sbjct: 1 MNQDELKQLVGTKAVEWIKDGMIVGLGTGSTVKYMVDALGKRVNEEGLDIVGVTTSIRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K I + ++V +DL+IDG DEI S + IKG G ALL EKI+A +++ + I
Sbjct: 61 EQAKSLGIVIKDIDEVDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNKNMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG+ LP+E+ +G +E GLN E R +GS L +D NY
Sbjct: 121 DESKMVDDLGQFPLPVEVIPYGSGTVFKRFEEK----GLNPEFRKNEDGS-LLHTDSDNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+D G I +P+ + L N GV+EHGLF+++V+ I+G DG VL+
Sbjct: 176 IIDLHLGKIENPKELGDYLINQVGVVEHGLFLDIVNTVIVGRQDG-PEVLE 225
>gi|317493810|ref|ZP_07952227.1| ribose 5-phosphate isomerase A [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918137|gb|EFV39479.1| ribose 5-phosphate isomerase A [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 219
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 114/230 (49%), Gaps = 13/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWEALKYVKPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV S+D+ +DG DEI+ +++IKG G AL REK++A A +FI I D
Sbjct: 59 KLKSLGITVFDLNDVDSLDIYVDGADEINGHMQMIKGGGAALTREKVVAAVAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSYVARE----LVKLGGQPEYRQG------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
+D I D + ++ I GV+ GLF N D A++G++DG ++
Sbjct: 169 LDVHNLKIMDAIALEKQINAIAGVVTVGLFANRGADVALVGSADGVKTIV 218
>gi|221639787|ref|YP_002526049.1| ribose-5-phosphate isomerase A [Rhodobacter sphaeroides KD131]
gi|254808717|sp|B9KKA1|RPIA_RHOSK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|221160568|gb|ACM01548.1| Ribose-5-phosphate isomerase A [Rhodobacter sphaeroides KD131]
Length = 262
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
K AARRA+ V DGM LG+GTGSTA + LA+++ G RVQ +P+S T
Sbjct: 9 DTAKFAAARRAVDLVQDGMKLGLGTGSTAAWMVRCLAERVREEGLRVQGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + ++ +DL+IDG DE D+ LIKG G ALL+EKI+A A+ R +VI D +
Sbjct: 69 RALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG T ++E L E+ LR +G ++D NYI+
Sbjct: 129 KEVAHLGAFPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDAPLLTDEKNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ + L I GV+E+GLFI++ D ++G DG +
Sbjct: 189 DLHLKRIGEPRKLGLALNQIAGVVENGLFIDICDTVVVGHGDGRVSLRD 237
>gi|329297002|ref|ZP_08254338.1| ribose-5-phosphate isomerase A [Plautia stali symbiont]
Length = 219
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L I + V S +TE
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALG-TIRDQIEGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP+ +V + + +DG DEI+ +++IKG G AL REKI+A A +FI I D
Sbjct: 60 LKSL-GIPVFDLNNVDVLSVYVDGADEINPHMQMIKGGGAALTREKIVAAVAQKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ G E R V+D GN I
Sbjct: 119 ASKQVDVLGNFPLPVEVIPMARAYVARE----LVKLGGLPEYR------QHVVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + +PGV+ GLF D A+IGT DG +
Sbjct: 169 LDVHNLRILDPIALEKTINALPGVVTVGLFAARGADIALIGTPDGVKTITN 219
>gi|206971873|ref|ZP_03232822.1| ribose 5-phosphate isomerase A [Bacillus cereus AH1134]
gi|206733258|gb|EDZ50431.1| ribose 5-phosphate isomerase A [Bacillus cereus AH1134]
Length = 220
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE
Sbjct: 1 MNLKQLAGEYAANFVNDGMKVGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAH 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 61 QLNIPLLSLNDVQSLDLTIDGADEIDSDLQLIKGGGGALLREKIVASSSKKLIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR + ++++D N I+D
Sbjct: 121 LVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNNEIYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|228921461|ref|ZP_04084784.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838234|gb|EEM83552.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 220
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G + +P+S+ TE
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFEAVPTSKETEALAH 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLLSLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|323339413|ref|ZP_08079696.1| ribose 5-phosphate isomerase A [Lactobacillus ruminis ATCC 25644]
gi|323093178|gb|EFZ35767.1| ribose 5-phosphate isomerase A [Lactobacillus ruminis ATCC 25644]
Length = 227
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 134/231 (58%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K +++++++ DGMT+G+GTGST + L ++ ++ + +S T
Sbjct: 1 MDQNELKSLVGKKSVEWIKDGMTVGLGTGSTVYYMVEELGRRVKDENLKITGVTTSIRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
N K IPL S + V +D++IDG DEI S + IKG G ALL EKI+A + + + I
Sbjct: 61 NQAKSLGIPLKSVDTVDHIDITIDGADEISSDFQGIKGGGAALLYEKIVATNSDKVMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LGR LP+E+ +G K ++ GLN R + + GL ++D NY
Sbjct: 121 DESKMVDKLGRFPLPVEVIPYGSQKIFERFEKK----GLNPAFR-KDDKGGLLLTDSDNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+D G I +P ++ L + GV+EHGLF++MVD I+G +G VL+
Sbjct: 176 IIDLHLGQIDNPHELAEYLIHQVGVVEHGLFLDMVDTVIVGRQNG-PEVLE 225
>gi|127511759|ref|YP_001092956.1| ribose-5-phosphate isomerase A [Shewanella loihica PV-4]
gi|166229239|sp|A3QB49|RPIA_SHELP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|126637054|gb|ABO22697.1| ribose-5-phosphate isomerase [Shewanella loihica PV-4]
Length = 219
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALEYVEKDSIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSEASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ V + + +DG DEI+ + +IKG G AL REKI+A A +F+ I D
Sbjct: 59 KMKALGIPVFDLNSVDQLSVYVDGADEINGHMDMIKGGGAALTREKIVAAVADKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V+ LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKEVEVLGEFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I +P+ + ++ I GV+ +GLF N D ++GT +G V
Sbjct: 169 LDVYNMKIFNPKALEEQINQIVGVVTNGLFANRGADVLLVGTPEGVKTV 217
>gi|23100064|ref|NP_693530.1| ribose-5-phosphate isomerase A [Oceanobacillus iheyensis HTE831]
gi|30173295|sp|Q8EN78|RPIA1_OCEIH RecName: Full=Ribose-5-phosphate isomerase A 1; AltName:
Full=Phosphoriboisomerase A 1; Short=PRI 1
gi|22778295|dbj|BAC14565.1| ribose 5-phosphate isomerase A [Oceanobacillus iheyensis HTE831]
Length = 224
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 130/229 (56%), Gaps = 8/229 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M+ ++K+ +A V DGM +G+G+GST + L ++I +G +++ IPSS T
Sbjct: 1 MNEQDKLKKAVGEKAATMVKDGMKVGLGSGSTVYWMIRSLGERIQQDGLKIEGIPSSNQT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL +V +D++IDG DE+D+ LIKG G AL REKIIA AA F++I
Sbjct: 61 ATWAEEAGIPLTDFSNVKELDITIDGADEVDANNHLIKGGGAALFREKIIAQAAKEFVII 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK V+ LG LP+E+ F +T + + ++ +R + V+D GN
Sbjct: 121 VDQSKVVETLGEFSLPVEVLPFSWQRTANEISKLGC------VPTVRVHEEEPLVTDNGN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
YI+D F IP P ++ E+ +I GVIE GLFI+M I+G D +
Sbjct: 175 YILDCPFKVIPHPDKLNKEIKSIVGVIETGLFIDMATTVIVGEKDNIYI 223
>gi|260427695|ref|ZP_05781674.1| ribose 5-phosphate isomerase A [Citreicella sp. SE45]
gi|260422187|gb|EEX15438.1| ribose 5-phosphate isomerase A [Citreicella sp. SE45]
Length = 260
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA ++V DGM +G+GTGSTA + L +K+ G R + +P+S T
Sbjct: 9 DKAKFVAAKRAAEFVEDGMRVGLGTGSTAAWLVRCLGEKVREEGLRFRGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + E+ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D +
Sbjct: 69 REVGIEVITLEEARWLDLTIDGADEFDGELSLIKGGGGALLQEKIVATASDQMVVIADAA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG + + ++E + ++ LR +G + +D N+I+
Sbjct: 129 KEVGTLGAFPLPVEVIPFGWTASQALIEEALVSMDVMGRQITLRMDGDAAYRTDESNFIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ ++ L IPGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLHLTRIGNPRQLALILNQIPGVVENGLFIDICDQVVIGYGDGRVEVRD 237
>gi|227891996|ref|ZP_04009801.1| ribose-5-phosphate isomerase A [Lactobacillus salivarius ATCC
11741]
gi|227866200|gb|EEJ73621.1| ribose-5-phosphate isomerase A [Lactobacillus salivarius ATCC
11741]
Length = 227
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 85/231 (36%), Positives = 132/231 (57%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
M+ ++K+ +A++++ DGM +G+GTGST K + L ++ G + + +S T
Sbjct: 1 MNQDELKQLVGTKAVEWIKDGMIVGLGTGSTVKYMVDALGKRVNEEGLDIVGVTTSIRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K I + ++V +DL+IDG DEI S + IKG G ALL EKI+A +++ + I
Sbjct: 61 EQAKSLGIVIKDIDEVDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNKNMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG+ LP+E+ +G +E GLN + R +GS L +D NY
Sbjct: 121 DESKMVDDLGQFPLPVEVIPYGSGTVFKRFEEK----GLNPKFRKNEDGS-LLHTDSDNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+D G I +P+ + L N GV+EHGLF+++V+ I+G DG VL+
Sbjct: 176 IIDLHLGKIENPKELGDYLINQVGVVEHGLFLDIVNTVIVGRQDG-PEVLE 225
>gi|217960233|ref|YP_002338793.1| ribose-5-phosphate isomerase A [Bacillus cereus AH187]
gi|229139429|ref|ZP_04268000.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-ST26]
gi|217066232|gb|ACJ80482.1| ribose 5-phosphate isomerase A [Bacillus cereus AH187]
gi|228643976|gb|EEL00237.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-ST26]
Length = 220
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 133/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + F++D N I+D
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|148254897|ref|YP_001239482.1| ribose-5-phosphate isomerase A [Bradyrhizobium sp. BTAi1]
gi|146407070|gb|ABQ35576.1| ribose-5-phosphate isomerase [Bradyrhizobium sp. BTAi1]
Length = 230
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 107/232 (46%), Positives = 151/232 (65%), Gaps = 4/232 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDA +KR AA A++ V GM LG+GTGSTAK F+ LL +K+ G +V +P+S T
Sbjct: 1 MDA--LKRQAAAHALREVESGMKLGLGTGSTAKHFVDLLGEKVRAGLKVVGVPTSEATRA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL + +++ +DL++DG DEI+ L LIKG GGALLREKI+A A+ R IVI D
Sbjct: 59 QAEACGVPLTTLDEIDHLDLTVDGADEINPALDLIKGGGGALLREKIVASASDRMIVIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
ESK V LGR LPIE+ FG+ T A+ + G++ ++ LR++ G +FV+DGG++
Sbjct: 119 ESKWVARLGRFPLPIEVIPFGLAATRHAIAAAFAKAGVSGQMDLRKSADGHVFVTDGGHW 178
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVD G I DP ++G L IPGV+EHGLFI + AI+ + G V+Q+
Sbjct: 179 IVDVRLGEIEDPPRLAGLLSAIPGVVEHGLFIGLGSTAILAGAQG-IRVIQR 229
>gi|123443597|ref|YP_001007570.1| ribose-5-phosphate isomerase A [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332160386|ref|YP_004296963.1| ribose-5-phosphate isomerase A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|166229256|sp|A1JPP4|RPIA_YERE8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|122090558|emb|CAL13427.1| ribose 5-phosphate isomerase A [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318604379|emb|CBY25877.1| ribose 5-phosphate isomerase A [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664616|gb|ADZ41260.1| ribose-5-phosphate isomerase A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859849|emb|CBX70180.1| ribose-5-phosphate isomerase A [Yersinia enterocolitica W22703]
Length = 220
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALEYVKPGTIVGVGTGSTAAHFIDALAS--IKGQIEGAVSSSDASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +V +D+ +DG DEI+S++++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSYGIQVFDCNEVDELDIYVDGADEINSQMQMIKGGGAALTREKIIAAIARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I D + ++ NI GV+ GLF N D A+IGT+DG V
Sbjct: 169 LDVHNLTILDAIALENKINNIAGVVTVGLFANRGADVALIGTADGVKTV 217
>gi|294139516|ref|YP_003555494.1| ribose 5-phosphate isomerase [Shewanella violacea DSS12]
gi|293325985|dbj|BAJ00716.1| ribose 5-phosphate isomerase [Shewanella violacea DSS12]
Length = 218
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALEYVEKDSIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSAASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V+ + + +DG DEI+ R+ +IKG G AL REKIIA A +FI I D
Sbjct: 59 KMKALGIPVYDLNSVNELSVYVDGADEINERMDMIKGGGAALTREKIIAAVADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 NTKQVDILGDFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------CLTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I P+ + ++ I GV+ +GLF N D ++GT +G V
Sbjct: 169 LDVYNMKIMKPKELEEQINQIVGVVTNGLFANRGADVLLVGTPEGVKTV 217
>gi|238785663|ref|ZP_04629640.1| Ribose-5-phosphate isomerase A [Yersinia bercovieri ATCC 43970]
gi|238713442|gb|EEQ05477.1| Ribose-5-phosphate isomerase A [Yersinia bercovieri ATCC 43970]
Length = 219
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTAAHFIDALG-SIKDQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +V +D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSYGIHVFDCNEVDVLDIYVDGADEINGHMQMIKGGGAALTREKIIAAIARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDLLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + ++ I GV+ GLF N D A+IGT+DG +++
Sbjct: 169 LDVHNLTILDAVALENKINGIAGVVTVGLFANRGADVALIGTADGVKTIVK 219
>gi|262273693|ref|ZP_06051506.1| ribose 5-phosphate isomerase A [Grimontia hollisae CIP 101886]
gi|262222108|gb|EEY73420.1| ribose 5-phosphate isomerase A [Grimontia hollisae CIP 101886]
Length = 217
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + I + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVTKGSIVGVGTGSTVNHFIDAL-ETIKEQIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP+ +V S+D+ +DG DEI+ +IKG G AL REKI+A A +FI I D
Sbjct: 60 L-EKIGIPVFDANEVDSLDIYVDGADEINPNNEMIKGGGAALTREKIVAAIAKQFICIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK+VD LG+ LP+E+ + G + R ++D GN I
Sbjct: 119 DSKKVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPCYREG------CITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I + + + ++ IPGV+ GLF N D + GT++G
Sbjct: 169 LDVHNLKITNAKELEDKINAIPGVVTVGLFANRGADVVLEGTANGVVK 216
>gi|163737667|ref|ZP_02145084.1| ribose 5-phosphate isomerase [Phaeobacter gallaeciensis BS107]
gi|161389193|gb|EDQ13545.1| ribose 5-phosphate isomerase [Phaeobacter gallaeciensis BS107]
Length = 262
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 134/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA + V DGM +G+GTGSTA + L D + N G R++ +P+S T
Sbjct: 9 DKAKFVAAKRAAEMVEDGMRVGLGTGSTAAWLVRCLGDMVQNDGLRIKGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ R +VI D++
Sbjct: 69 RDVGIETLTLDEAKWLDLTIDGADEFDRDLNLIKGGGGALLQEKIVATASDRMVVIADKA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG T + L+E + + LR NG V+D GN+I+
Sbjct: 129 KEVESLGAFPLPVEVIPFGWQTTQALLEETLVAMEVMGRKTTLRMNGDAALVTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ L IPGV+E+GLFI++ D ++G DG+ V
Sbjct: 189 DLHLNRIGNVRQMALVLNQIPGVVENGLFIDICDTVVVGYGDGKVEVRD 237
>gi|240103838|ref|YP_002960147.1| ribose-5-phosphate isomerase A [Thermococcus gammatolerans EJ3]
gi|239911392|gb|ACS34283.1| Ribose-5-phosphate isomerase (rpiA) [Thermococcus gammatolerans
EJ3]
Length = 226
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/227 (36%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFC 62
++K+ AR A+ +V D M +G+GTGST F+ L + I V IP+S +
Sbjct: 2 EELKKAVAREALSFVDDDMVIGLGTGSTTAYFIKFLGELIKEEELEVYGIPTSHQSRLLA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+P+ S ++ ++D+++DG DE+D L LIKG G AL EKII + A FIV+ DES
Sbjct: 62 IESGVPVVSLDEADAIDIAVDGADEVDPALNLIKGRGAALTMEKIIEYRAGTFIVLVDES 121
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V + +PIE+ A+ E F ELR+ G ++D GN+I+
Sbjct: 122 KLVKRLGEKMPVPIEVIPAAW----RAIAEELEVFNARAELRMAVKKDGPVITDNGNFIL 177
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
DA F I DP + EL IPGV+E+G+F ++ D ++GT +G +
Sbjct: 178 DARFERIDDPLDMEIELNTIPGVVENGIFADIADVVLVGTREGVRKL 224
>gi|224285036|gb|ACN40247.1| unknown [Picea sitchensis]
Length = 295
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 5/234 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
Q+K+ AA +A++YV GM LG+GTGSTA + + + + G + +P+S+ T
Sbjct: 62 TQDQLKKLAAEKAVEYVESGMVLGLGTGSTAAFAVARIGELMKAGELKDIVGVPTSKRTA 121
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL ++ +DL+IDG DE+D L L+KG GGALLREK++ A+++F+VI
Sbjct: 122 EQAESLGIPLSVLDEHPKIDLAIDGADEVDPELNLVKGRGGALLREKMVEAASAKFVVIV 181
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V+ LG +P+E+ F S L+ + G +LR+ +G +++D
Sbjct: 182 DESKLVNGLGGSGLAMPVEVVPFCWKYNASRLQSLFQAEGCEAKLRMDGDGDKPYITDNA 241
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
NYIVD +F I D + + + GV+EHGLF++M II ++G + +
Sbjct: 242 NYIVDLYFKTPIKDSRAAAKAILGFEGVVEHGLFLDMATAVIIAGAEGVRVTTK 295
>gi|229012050|ref|ZP_04169229.1| Ribose-5-phosphate isomerase A [Bacillus mycoides DSM 2048]
gi|228749138|gb|EEL98984.1| Ribose-5-phosphate isomerase A [Bacillus mycoides DSM 2048]
Length = 221
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 128/225 (56%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGMT+G+GTGST + L ++ G +Q P+S+ TE K
Sbjct: 2 MNLKQLAGEYAAGFVRDGMTIGLGTGSTVYWTIQKLGHRVQEGLSIQAAPTSKETEVLAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S ++ +DL+IDG DEI++ L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLSIPLISLNEIDILDLTIDGADEINNDLQLIKGGGGALLREKIVATSSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T ++ + E LR G F++D GN I+D
Sbjct: 122 LVSHLGTFPLPIEIIPFSWKQTEKRIQSLGC------ETCLRMKDGGPFITDNGNLIIDC 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
F I +P EL I GV+E GLFINM IIGT +G
Sbjct: 176 IFPNKILNPNDTHTELKMITGVVETGLFINMTSKTIIGTKNGIKE 220
>gi|116781091|gb|ABK21962.1| unknown [Picea sitchensis]
gi|116793399|gb|ABK26732.1| unknown [Picea sitchensis]
Length = 295
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 5/234 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
Q+K+ AA +A++YV GM LG+GTGSTA + + + + G + +P+S+ T
Sbjct: 62 TQDQLKKLAAEKAVEYVESGMVLGLGTGSTAAFAVARIGELMKAGELKDIVGVPTSKRTA 121
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL ++ +DL+IDG DE+D L L+KG GGALLREK++ A+++F+VI
Sbjct: 122 EQAESLGIPLSVLDEHPKIDLAIDGADEVDPELNLVKGRGGALLREKMVEAASAKFVVIV 181
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V+ LG +P+E+ F S L+ + G +LR+ +G +++D
Sbjct: 182 DESKLVNGLGGSGLAMPVEVVPFCWKYNASRLQSLFQAEGCEAKLRMDGDGDKPYITDNA 241
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
NYIVD +F I D + + + GV+EHGLF++M II ++G + +
Sbjct: 242 NYIVDLYFKTPIKDSRAAAKAILGFEGVVEHGLFLDMATAVIIAGAEGVRVTTK 295
>gi|153001898|ref|YP_001367579.1| ribose-5-phosphate isomerase A [Shewanella baltica OS185]
gi|166229238|sp|A6WRS7|RPIA_SHEB8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|151366516|gb|ABS09516.1| ribose 5-phosphate isomerase [Shewanella baltica OS185]
Length = 220
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVEKDSIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V + + +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 KMKALGIPVYDLNSVDRLSVYVDGADEINDHMDMIKGGGAALTREKIVAAVAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVDILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + I +P+ + ++ I GV+ +GLF D ++GT DG K
Sbjct: 169 LDVYNLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVGTPDGVKTFTAK 220
>gi|148543535|ref|YP_001270905.1| ribose-5-phosphate isomerase A [Lactobacillus reuteri DSM 20016]
gi|184152941|ref|YP_001841282.1| ribose-5-phosphate isomerase A [Lactobacillus reuteri JCM 1112]
gi|194468079|ref|ZP_03074065.1| ribose 5-phosphate isomerase [Lactobacillus reuteri 100-23]
gi|227363510|ref|ZP_03847630.1| ribose-5-phosphate isomerase [Lactobacillus reuteri MM2-3]
gi|325681883|ref|ZP_08161401.1| ribose 5-phosphate isomerase A [Lactobacillus reuteri MM4-1A]
gi|166991518|sp|A5VI94|RPIA_LACRD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|229564312|sp|B2G5S0|RPIA_LACRJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|148530569|gb|ABQ82568.1| ribose-5-phosphate isomerase [Lactobacillus reuteri DSM 20016]
gi|183224285|dbj|BAG24802.1| ribose 5-phosphate epimerase [Lactobacillus reuteri JCM 1112]
gi|194452932|gb|EDX41830.1| ribose 5-phosphate isomerase [Lactobacillus reuteri 100-23]
gi|227071447|gb|EEI09750.1| ribose-5-phosphate isomerase [Lactobacillus reuteri MM2-3]
gi|324978527|gb|EGC15476.1| ribose 5-phosphate isomerase A [Lactobacillus reuteri MM4-1A]
Length = 227
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 8/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
MD +K + +++Y+ GM +G+GTGST K + L ++ G + + +S T
Sbjct: 1 MDQNALKEQTGKESVKYIKSGMIVGLGTGSTVKYMVDELGKQVQEGKIKDIIGVTTSNRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ I + +DV +DL+IDG DEI + IKG GGALL EKI+A+A+++ + I
Sbjct: 61 AKQARDLGITIKDIDDVDHIDLTIDGADEISDDFQGIKGGGGALLWEKIVANASNKVMWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V LG LP+E+ FG L++ + R +G F +D N
Sbjct: 121 VDESKLVHKLGAFPLPVEVIPFGSQHVFDRLEKKGY------KPTWRMDGDKKFRTDENN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YI+D G I DP+ ++ EL ++ G++E GLF+N V+ I+GT +G ++ +
Sbjct: 175 YIIDLHLGEIDDPKALADELIHMVGIVETGLFLNRVNDVIVGTPEGPKVLHAR 227
>gi|134094322|ref|YP_001099397.1| ribose-5-phosphate isomerase A [Herminiimonas arsenicoxydans]
gi|166200046|sp|A4G433|RPIA_HERAR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|133738225|emb|CAL61270.1| ribose 5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Herminiimonas arsenicoxydans]
Length = 223
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 9/229 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AR AI+YVV G +G+GTGSTA F+ L KI + + + SS T
Sbjct: 1 MTQDEMKQAVARAAIEYVVPGEIIGVGTGSTANFFIDELG-KIKDRIK-GAVASSEATAQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + ++ ++ + IDG DEI ++ +IKG G AL REKI+A A +F+ I D
Sbjct: 59 RLKSHGIAVFDLNEIDAMSVYIDGADEITAQGAMIKGGGAALTREKIVASVAKQFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG LP+E+ L L E RLR V+D G +I
Sbjct: 119 GSKLVDLLGNFPLPVEVIPMAQAVVARKLAA------LGGEPRLRLKDGKPLVTDNGCFI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP + ++ NI GV+ GLF D A++GT++G +
Sbjct: 173 IDVLGLKIQDPAELEAQINNIVGVVTVGLFARRGADIALLGTAEGVKRL 221
>gi|163740760|ref|ZP_02148153.1| ribose 5-phosphate isomerase [Phaeobacter gallaeciensis 2.10]
gi|161385751|gb|EDQ10127.1| ribose 5-phosphate isomerase [Phaeobacter gallaeciensis 2.10]
Length = 262
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 135/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA + V DGM +G+GTGSTA + L D + N G R++ +P+S T
Sbjct: 9 DKAKFVAAKRAAEMVEDGMRVGLGTGSTAAWLVRCLGDMVQNDGLRIKGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ R +VI D++
Sbjct: 69 RDVGIEILTLDEAKWLDLTIDGADEFDRDLNLIKGGGGALLQEKIVATASDRMVVIADKA 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG T + L+E + + LR NG V+D GN+I+
Sbjct: 129 KEVESLGAFPLPVEVIPFGWQTTQALLEETLVAMEVMGRKTTLRMNGDAALVTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ L IPGV+E+GLFI++ D ++G DG+ V
Sbjct: 189 DLHLNRIGNVRQMALVLNQIPGVVENGLFIDICDTVVVGYGDGKVEVRD 237
>gi|157372158|ref|YP_001480147.1| ribose-5-phosphate isomerase A [Serratia proteamaculans 568]
gi|157323922|gb|ABV43019.1| ribose 5-phosphate isomerase [Serratia proteamaculans 568]
Length = 239
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 113/229 (49%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 22 MTQDELKKAVGWAALDYVTPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSDASTAK 80
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 81 L-KSLGIHVFDSNEVDSLDIYVDGADEINRHMQMIKGGGAALTREKIIAAIARKFICIVD 139
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 140 SSKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 189
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I D + ++ I GV+ GLF N D A++GT DG +V
Sbjct: 190 LDVHNLSIMDAIALENKINGIAGVVTVGLFANRGADVALVGTPDGVKVV 238
>gi|229161665|ref|ZP_04289645.1| Ribose-5-phosphate isomerase A [Bacillus cereus R309803]
gi|228621910|gb|EEK78756.1| Ribose-5-phosphate isomerase A [Bacillus cereus R309803]
Length = 222
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 93/225 (41%), Positives = 133/225 (59%), Gaps = 7/225 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+K+ A A +V DGM +G+GTGST + L ++ G +Q IP+S+ TE+ +
Sbjct: 3 NLKQIAGEYAANFVQDGMKVGLGTGSTVYWTIQKLGQRVQEGLSIQAIPTSKETESLAQQ 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+IPL S D+ ++DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 63 LNIPLISLNDIQTLDLTIDGADEIDSNLQLIKGGGGALLREKIVAASSKELIIIADESKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LP+EI F +T + ++ + + LR + F++D N I+D
Sbjct: 123 VTHLGTFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNNDTFITDNNNMIIDCV 176
Query: 185 FG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFINM AIIGT +G +
Sbjct: 177 FPNHISNPATLHEKLKMITGVVETGLFINMTSKAIIGTKNGIKEL 221
>gi|28377480|ref|NP_784372.1| ribose-5-phosphate isomerase A [Lactobacillus plantarum WCFS1]
gi|254555710|ref|YP_003062127.1| ribose-5-phosphate isomerase A [Lactobacillus plantarum JDM1]
gi|300769730|ref|ZP_07079612.1| ribose-5-phosphate isomerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179690|ref|YP_003923818.1| ribose-5-phosphate isomerase A [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|38258544|sp|Q88YY5|RPIA_LACPL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|28270312|emb|CAD63213.1| ribose 5-phosphate epimerase [Lactobacillus plantarum WCFS1]
gi|254044637|gb|ACT61430.1| ribose-5-phosphate isomerase A [Lactobacillus plantarum JDM1]
gi|300492638|gb|EFK27824.1| ribose-5-phosphate isomerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045181|gb|ADN97724.1| ribose-5-phosphate isomerase A [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 227
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 127/229 (55%), Gaps = 7/229 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M+ Q+K+ ++A++Y+ DGM +G+GTGST K + L +++ + + +S T
Sbjct: 1 MNQDQLKQLVGQKAVEYIQDGMQVGLGTGSTVKFMVDALGERVKNEHLNIVGVSTSDRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K IP+ S ++V +DL+IDG DEI + +KG G ALL EKI+A + + + I
Sbjct: 61 AQAKALGIPMKSVDEVDHLDLTIDGADEIADDFQGVKGGGAALLFEKIVAINSDKVMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V LG LP+E+ +G E + G N R+ L +D N
Sbjct: 121 DESKMVHQLGAFGLPVEVIPYGSQHVF----EKMAARGYNPV--FRKVNDELVRTDSNNI 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+D I DP ++ +L ++ GV+EHGLF++MV+ I+G ++G ++
Sbjct: 175 IIDLHIDPITDPHALAEDLIHMVGVVEHGLFLDMVNTVIVGHANGPEVI 223
>gi|324326760|gb|ADY22020.1| ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 220
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 134/226 (59%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE +
Sbjct: 1 MDLKQIAGEYAANFVKDGMKVGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + +F++D N IVD
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNEIFITDNNNMIVDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIATPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIKEL 220
>gi|270264941|ref|ZP_06193205.1| ribose-5-phosphate isomerase A [Serratia odorifera 4Rx13]
gi|270041239|gb|EFA14339.1| ribose-5-phosphate isomerase A [Serratia odorifera 4Rx13]
Length = 251
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 34 MTQDELKKAVGWAALDYVTPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSDASTAK 92
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+D+ +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 93 L-KSLGIHVFDSNEVDSLDIYVDGADEINRQMQMIKGGGAALTREKIIAAIARKFICIVD 151
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 152 SSKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 201
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I D + ++ I GV+ GLF N D A++GT DG +V
Sbjct: 202 LDVHNLSIMDAIALENKINGIAGVVTVGLFANRGADVALVGTPDGVKVV 250
>gi|229145367|ref|ZP_04273756.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-ST24]
gi|296503332|ref|YP_003665032.1| ribose-5-phosphate isomerase A [Bacillus thuringiensis BMB171]
gi|228638206|gb|EEK94647.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-ST24]
gi|296324384|gb|ADH07312.1| ribose-5-phosphate isomerase A [Bacillus thuringiensis BMB171]
Length = 220
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGTFPLPIEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M IIG +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSKVIIGAKNGIKEL 220
>gi|86136608|ref|ZP_01055187.1| ribose 5-phosphate isomerase [Roseobacter sp. MED193]
gi|85827482|gb|EAQ47678.1| ribose 5-phosphate isomerase [Roseobacter sp. MED193]
Length = 262
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA++A V DGM +G+GTGSTA + L + + G + +P+S T
Sbjct: 9 DKAKFVAAKQASGLVEDGMRVGLGTGSTAAWLVRCLGEMVREEGLKFTAVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IP+ S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D
Sbjct: 69 REVGIPVTSLDEAKWLDLTIDGADEFDRDLNLIKGGGGALLQEKIVATASDQMVVIADAG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+EI FG + + ++E L LR NG F++D GN+I+
Sbjct: 129 KEVENLGAFPLPVEIIPFGWQTSQALIEETLVSMDVLGRSATLRMNGDRAFMTDEGNHIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ + IPGV+E+GLFI++ D IIG DG V
Sbjct: 189 DLHLNRIGNARQLALVINQIPGVVENGLFIDICDTVIIGYGDGNVEVRD 237
>gi|120597843|ref|YP_962417.1| ribose-5-phosphate isomerase A [Shewanella sp. W3-18-1]
gi|166229242|sp|A1RGR8|RPIA_SHESW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|120557936|gb|ABM23863.1| ribose-5-phosphate isomerase [Shewanella sp. W3-18-1]
Length = 220
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G +G+GTGST F+ LA + + V S +T+
Sbjct: 1 MTQDEMKKAAGWAALKYVEEGSIVGVGTGSTVNHFIDALA-TMKDDIEGAVSSSEASTQK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP++ V + + +DG DEI+ R+ +IKG G AL REKI+A A +FI I D
Sbjct: 60 MKAL-GIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+V+ LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVNILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + I +P+ + ++ I GV+ +GLF D ++GT DG K
Sbjct: 169 LDVYNLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVGTPDGVKTFTTK 220
>gi|229151003|ref|ZP_04279214.1| Ribose-5-phosphate isomerase A [Bacillus cereus m1550]
gi|228632563|gb|EEK89181.1| Ribose-5-phosphate isomerase A [Bacillus cereus m1550]
Length = 220
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DE+DS L+LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEVDSNLQLIKGGGGALLREKIVASSSKKLIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGTFPLPIEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNLIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPVHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|196032447|ref|ZP_03099861.1| ribose 5-phosphate isomerase [Bacillus cereus W]
gi|228946402|ref|ZP_04108723.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195995198|gb|EDX59152.1| ribose 5-phosphate isomerase [Bacillus cereus W]
gi|228813265|gb|EEM59565.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 221
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 133/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE K
Sbjct: 1 MDLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + F++D N I+D
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|309389524|gb|ADO77404.1| ribose-5-phosphate isomerase [Halanaerobium praevalens DSM 2228]
Length = 223
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 132/229 (57%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
++ K+ +A Y+ DGM +G+GTGSTA + + + + NG +++ +P+S+ T +
Sbjct: 1 MKAKKLTGEKATDYIKDGMIIGLGTGSTAYYAIKKVGEMVRNGLKIKAVPTSKETADLAL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
I L + S+DL+IDG DE+D LIKG GGALLREKI+A A + I++ DESK
Sbjct: 61 SEGIELIDLAEAKSLDLTIDGADEVDPDFNLIKGGGGALLREKIVASATDKLIIVVDESK 120
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD LPIE+ F T +++ + +R+ ++ +D GNYI+D
Sbjct: 121 LVDNLGSTFKLPIEVTPFSWKYTQQMIEKFSCDS------EIRKEAGEIYKTDNGNYILD 174
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
FG I DP I+ EL +PGV+E+G+F M + I+G +DG VL+K
Sbjct: 175 CDFGKIEDPIKITTELNKLPGVVENGIFAEMAEIVIVGYNDGHVEVLEK 223
>gi|304396734|ref|ZP_07378614.1| ribose 5-phosphate isomerase [Pantoea sp. aB]
gi|304355530|gb|EFM19897.1| ribose 5-phosphate isomerase [Pantoea sp. aB]
Length = 219
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA + + V S +T+
Sbjct: 1 MTQDELKKAVGWAALDYVQPGTIVGVGTGSTAAHFIDALA-TVRHQIDGAVSSSDASTQK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + ++ + + +DG DEI+ ++++IKG G AL REKI+A A FI I D
Sbjct: 60 LKSL-GIQVFDLNEIDVLSVYVDGADEINPQMQMIKGGGAALTREKIVAAVAETFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LGR LP+E+ + G E R V+D GN I
Sbjct: 119 ASKEVDVLGRFPLPVEVIPMARSYVARQ----LVKMGGLPEYRQN------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + +PGV+ GLF D A+IG DG + +
Sbjct: 169 LDVHNLRILDPIELEKTINALPGVVTVGLFAARGADIALIGGPDGVKTIKK 219
>gi|227545188|ref|ZP_03975237.1| ribose-5-phosphate isomerase [Lactobacillus reuteri CF48-3A]
gi|300909135|ref|ZP_07126596.1| ribose-5-phosphate isomerase [Lactobacillus reuteri SD2112]
gi|146345337|gb|ABQ23680.1| ribose 5-phosphate isomerase [Lactobacillus reuteri]
gi|227184834|gb|EEI64905.1| ribose-5-phosphate isomerase [Lactobacillus reuteri CF48-3A]
gi|300893000|gb|EFK86359.1| ribose-5-phosphate isomerase [Lactobacillus reuteri SD2112]
Length = 227
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 129/233 (55%), Gaps = 8/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
MD +K + +++Y+ GM +G+GTGST K + L ++ G + + +S T
Sbjct: 1 MDQNALKEQTGKESVKYIKSGMIVGLGTGSTVKYMVDELGKQVQEGKIKDIIGVTTSNRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ I + +DV +DL+IDG DEI + IKG GGALL EKI+A+A+++ + I
Sbjct: 61 AKQARDLGITIKDIDDVDHIDLTIDGADEISDDFQGIKGGGGALLWEKIVANASNKVMWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V LG LP+E+ FG L++ + R +G F +D N
Sbjct: 121 VDESKLVHKLGAFPLPVEVIPFGSQHVFDRLEKKGY------KPTWRMDGDKKFRTDENN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YI+D G I DP+ ++ EL ++ G++E GLF+N V+ I+GTS+G ++ +
Sbjct: 175 YIIDLHLGEIDDPKALADELIHMVGIVETGLFLNRVNDVIVGTSEGPKVLHAR 227
>gi|118478151|ref|YP_895302.1| ribose-5-phosphate isomerase A [Bacillus thuringiensis str. Al
Hakam]
gi|118417376|gb|ABK85795.1| ribose-5-phosphate isomerase [Bacillus thuringiensis str. Al Hakam]
Length = 236
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 7/227 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
A+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE
Sbjct: 16 AMDLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALA 75
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DES
Sbjct: 76 QQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDES 135
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG LPIEI F +T S ++ + + LR + F++D N I+D
Sbjct: 136 KVVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIID 189
Query: 183 AFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 190 CIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 236
>gi|126735314|ref|ZP_01751060.1| ribose 5-phosphate isomerase [Roseobacter sp. CCS2]
gi|126715869|gb|EBA12734.1| ribose 5-phosphate isomerase [Roseobacter sp. CCS2]
Length = 262
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 136/233 (58%), Gaps = 3/233 (1%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNT 58
M + K AA++A ++V GM +G+GTGSTA+ + L + + G +++ +P+S+ T
Sbjct: 5 MSPVEKAKFVAAKQATEFVESGMKVGLGTGSTAEWLVQCLGEMVREEGLKIKGVPTSKRT 64
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
K I + + E+ +D++IDG DE DS L LIKG GGA LREK++A A+ R IVI
Sbjct: 65 GLLAKKVGIDVITLEEAKWLDVTIDGTDEYDSDLTLIKGGGGAHLREKVVATASERMIVI 124
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGG 177
D SK+V+ LG LPIE+ FG+ T ++E L E+ R G FV+D G
Sbjct: 125 ADASKKVETLGAFPLPIEVIPFGLPVTQGLIEETLIGMDVLGREVTQRMKGDAPFVTDEG 184
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N+I+D I +P+ +S + IPGV+E+GLFI++ D I+G DG
Sbjct: 185 NFILDLHLKRIGNPRQLSLVINQIPGVVENGLFIDICDVVIVGHGDGRVTTRD 237
>gi|30020917|ref|NP_832548.1| ribose-5-phosphate isomerase A [Bacillus cereus ATCC 14579]
gi|228959025|ref|ZP_04120726.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229128134|ref|ZP_04257116.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-Cer4]
gi|41017689|sp|Q81CG8|RPIA_BACCR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|29896470|gb|AAP09749.1| Ribose 5-phosphate isomerase [Bacillus cereus ATCC 14579]
gi|228655409|gb|EEL11265.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-Cer4]
gi|228800686|gb|EEM47602.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 220
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 93/226 (41%), Positives = 134/226 (59%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGTFPLPIEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFPNHISNPVHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIKKL 220
>gi|114798972|ref|YP_759434.1| ribose-5-phosphate isomerase A [Hyphomonas neptunium ATCC 15444]
gi|114739146|gb|ABI77271.1| ribose 5-phosphate isomerase A [Hyphomonas neptunium ATCC 15444]
Length = 236
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 135/231 (58%), Gaps = 3/231 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K+NAA A+ +V +GMT+G+GTGSTAK F+ +LAD+IA+G V+ I +S T
Sbjct: 4 MASDTEKQNAAAAAMDFVEEGMTIGLGTGSTAKFFVEMLADEIADGLIVRCIETSNQTRE 63
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL E V + L++DG DE+ LIKG G ALLREKIIA+A+ +VI D
Sbjct: 64 LARSLGVPLIPFEQVDRIHLTVDGADEVGPGGVLIKGGGAALLREKIIANASDHMVVIAD 123
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGL-NEELRLRRNGSG--LFVSDGG 177
SK V LG LP+E+ FG T + + G+ + LR+ L V+DGG
Sbjct: 124 SSKEVPHLGAFPLPVEVTPFGYTITAKKVHDALVASGVERPRIELRKAAGSTDLLVTDGG 183
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N+I+D G IPDP L +PGV+EHGLFI + IIG +G ++
Sbjct: 184 NHILDCHCGRIPDPAKTGAYLSGVPGVVEHGLFIGIARTVIIGEENGAHII 234
>gi|30262763|ref|NP_845140.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. Ames]
gi|47528084|ref|YP_019433.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185609|ref|YP_028861.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. Sterne]
gi|65320087|ref|ZP_00393046.1| COG0120: Ribose 5-phosphate isomerase [Bacillus anthracis str.
A2012]
gi|165869122|ref|ZP_02213782.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0488]
gi|167632517|ref|ZP_02390844.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0442]
gi|167637821|ref|ZP_02396100.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0193]
gi|170685398|ref|ZP_02876622.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0465]
gi|170704559|ref|ZP_02895025.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0389]
gi|177649349|ref|ZP_02932351.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0174]
gi|190565187|ref|ZP_03018107.1| ribose 5-phosphate isomerase [Bacillus anthracis Tsiankovskii-I]
gi|196041734|ref|ZP_03109025.1| ribose 5-phosphate isomerase [Bacillus cereus NVH0597-99]
gi|196043457|ref|ZP_03110695.1| ribose 5-phosphate isomerase [Bacillus cereus 03BB108]
gi|218903914|ref|YP_002451748.1| ribose 5-phosphate isomerase [Bacillus cereus AH820]
gi|225864768|ref|YP_002750146.1| ribose 5-phosphate isomerase A [Bacillus cereus 03BB102]
gi|227814397|ref|YP_002814406.1| ribose 5-phosphate isomerase A [Bacillus anthracis str. CDC 684]
gi|228915393|ref|ZP_04078986.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229122338|ref|ZP_04251552.1| Ribose-5-phosphate isomerase A [Bacillus cereus 95/8201]
gi|229185011|ref|ZP_04312201.1| Ribose-5-phosphate isomerase A [Bacillus cereus BGSC 6E1]
gi|229601389|ref|YP_002867070.1| ribose 5-phosphate isomerase A [Bacillus anthracis str. A0248]
gi|254685355|ref|ZP_05149215.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. CNEVA-9066]
gi|254722763|ref|ZP_05184551.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. A1055]
gi|254737811|ref|ZP_05195514.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. Western
North America USA6153]
gi|254743015|ref|ZP_05200700.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. Kruger B]
gi|254752125|ref|ZP_05204162.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. Vollum]
gi|254760646|ref|ZP_05212670.1| ribose-5-phosphate isomerase A [Bacillus anthracis str. Australia
94]
gi|300118754|ref|ZP_07056480.1| ribose-5-phosphate isomerase A [Bacillus cereus SJ1]
gi|301054313|ref|YP_003792524.1| ribose-5-phosphate isomerase A [Bacillus anthracis CI]
gi|41017691|sp|Q81PL1|RPIA_BACAN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|30257395|gb|AAP26626.1| ribose 5-phosphate isomerase A [Bacillus anthracis str. Ames]
gi|47503232|gb|AAT31908.1| ribose 5-phosphate isomerase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179536|gb|AAT54912.1| ribose 5-phosphate isomerase [Bacillus anthracis str. Sterne]
gi|164715848|gb|EDR21365.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0488]
gi|167514370|gb|EDR89737.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0193]
gi|167532815|gb|EDR95451.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0442]
gi|170130360|gb|EDS99221.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0389]
gi|170670758|gb|EDT21497.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0465]
gi|172084423|gb|EDT69481.1| ribose 5-phosphate isomerase [Bacillus anthracis str. A0174]
gi|190563214|gb|EDV17179.1| ribose 5-phosphate isomerase [Bacillus anthracis Tsiankovskii-I]
gi|196025766|gb|EDX64435.1| ribose 5-phosphate isomerase [Bacillus cereus 03BB108]
gi|196027503|gb|EDX66119.1| ribose 5-phosphate isomerase [Bacillus cereus NVH0597-99]
gi|218537347|gb|ACK89745.1| ribose 5-phosphate isomerase [Bacillus cereus AH820]
gi|225787727|gb|ACO27944.1| ribose 5-phosphate isomerase A [Bacillus cereus 03BB102]
gi|227006106|gb|ACP15849.1| ribose 5-phosphate isomerase A [Bacillus anthracis str. CDC 684]
gi|228598486|gb|EEK56116.1| Ribose-5-phosphate isomerase A [Bacillus cereus BGSC 6E1]
gi|228661187|gb|EEL16813.1| Ribose-5-phosphate isomerase A [Bacillus cereus 95/8201]
gi|228844336|gb|EEM89394.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229265797|gb|ACQ47434.1| ribose 5-phosphate isomerase A [Bacillus anthracis str. A0248]
gi|298723911|gb|EFI64627.1| ribose-5-phosphate isomerase A [Bacillus cereus SJ1]
gi|300376482|gb|ADK05386.1| ribose-5-phosphate isomerase A [Bacillus cereus biovar anthracis
str. CI]
Length = 220
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 133/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE +
Sbjct: 1 MDLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + F++D N I+D
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|254466880|ref|ZP_05080291.1| ribose 5-phosphate isomerase A [Rhodobacterales bacterium Y4I]
gi|206687788|gb|EDZ48270.1| ribose 5-phosphate isomerase A [Rhodobacterales bacterium Y4I]
Length = 262
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFC 62
+ K AA+RA + V DGM +G+GTGSTA + L + + +G ++ +P+S T
Sbjct: 9 DKAKFVAAKRAAEMVEDGMRVGLGTGSTAAWLVRCLGEMVEKDGLKITAVPTSSRTAALA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +D++IDG DE D+ L LIKG GGA L+EKI+A A+ + +VI D S
Sbjct: 69 RDVGINVVSLDEAKWLDMTIDGADEFDADLNLIKGGGGAHLQEKIVATASDQMVVIADAS 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ +FG + + ++E + LR NG FV+D GNYI+
Sbjct: 129 KSVETLGAFPLPVEVLRFGWQSSQALIEETLVSMDVMGRSTTLRMNGDVPFVTDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ L IPGVIE+GLFI++ D +IG DG V
Sbjct: 189 DLHLHRIGNARQLALVLNQIPGVIENGLFIDICDTVVIGYGDGRVEVRD 237
>gi|229156369|ref|ZP_04284464.1| Ribose-5-phosphate isomerase A [Bacillus cereus ATCC 4342]
gi|228627092|gb|EEK83824.1| Ribose-5-phosphate isomerase A [Bacillus cereus ATCC 4342]
Length = 220
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 131/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE K
Sbjct: 1 MNLKQLAGEYAAYFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ ++I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELLIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T ++ + + LR + +F++D N IVD
Sbjct: 121 LVTHLGTFPLPVEIIPFSWKQTERKIQSLGC------QTTLRLKNNEIFITDNNNMIVDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIATPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIKEL 220
>gi|229091797|ref|ZP_04222995.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-42]
gi|228691525|gb|EEL45280.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-42]
Length = 220
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 134/226 (59%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE +
Sbjct: 1 MDLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + +F++D N I+D
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNEMFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|288869804|ref|ZP_05976395.2| ribose 5-phosphate isomerase A [Methanobrevibacter smithii DSM
2374]
gi|288860317|gb|EFC92615.1| ribose 5-phosphate isomerase A [Methanobrevibacter smithii DSM
2374]
Length = 224
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 132/229 (57%), Gaps = 6/229 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M + +K+ A +A +YV DG LG+GTGST F+ + +IA G V IP+S +
Sbjct: 1 MINMNLKKEAGYKAAEYVTDGDILGLGTGSTTHYFIEAVGKRIADEGINVMGIPTSFQSL 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K +IP+ S E+ +DL++DG DE+D L L+KG G A +EKI+ ++A +FIVI
Sbjct: 61 LLAKQWNIPVTSLEEHD-IDLAVDGADEVDKNLNLVKGGGAAHTKEKIVDYSAKQFIVIV 119
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V+ +G +P+E+ + + G E+R+ G ++D GN+
Sbjct: 120 DESKYVEEIGNFPVPVEVIPDASRVVI----QTLEDMGAECEIRMGERKDGPVITDNGNF 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++DA F I P + +L +IPGV+E+G+F MVD IIGTS+G +
Sbjct: 176 VIDAKFEKIESPMHLEIDLNSIPGVVENGIFTQMVDKVIIGTSEGIKEL 224
>gi|319427360|gb|ADV55434.1| ribose 5-phosphate isomerase [Shewanella putrefaciens 200]
Length = 220
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G +G+GTGST F+ LA + + V S +T+
Sbjct: 1 MTQDEMKKAAGWAALKYVEEGSIVGVGTGSTVNHFIDALA-TMKDDIEGAVSSSEASTQK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP++ V + + +DG DEI+ R+ +IKG G AL REKI+A A +FI I D
Sbjct: 60 MKAL-GIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+V+ LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVNILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + I +P+ + ++ I GV+ +GLF D ++GT DG K
Sbjct: 169 LDVYNLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVGTPDGVKTFTAK 220
>gi|228939912|ref|ZP_04102489.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972803|ref|ZP_04133402.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979386|ref|ZP_04139722.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis Bt407]
gi|229110242|ref|ZP_04239816.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock1-15]
gi|228673228|gb|EEL28498.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock1-15]
gi|228780390|gb|EEM28621.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis Bt407]
gi|228787018|gb|EEM34998.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819843|gb|EEM65891.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940562|gb|AEA16458.1| ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 220
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAH 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGTFPLPIEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M IIG +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSKVIIGAKNGIKEL 220
>gi|126740002|ref|ZP_01755692.1| ribose 5-phosphate isomerase [Roseobacter sp. SK209-2-6]
gi|126718821|gb|EBA15533.1| ribose 5-phosphate isomerase [Roseobacter sp. SK209-2-6]
Length = 262
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA++A V GM +G+GTGSTA + L + + G R IP+S T
Sbjct: 9 DKAKFVAAKQAAGLVESGMRVGLGTGSTAAWLVRCLGEMVREEGLRFTAIPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D
Sbjct: 69 RELGIKVTSLDEAKWLDLTIDGADEFDKDLNLIKGGGGALLQEKIVATASDQMVVIADAG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG + + L+E L LR NG FV+D GNYI+
Sbjct: 129 KEVECLGAFPLPLEVIPFGWQTSQALLEESLISMDVLGRNATLRMNGDAPFVTDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + +S + IPGV+E+GLFI++ D IIG DG
Sbjct: 189 DLHLKRIGNARQLSLVVNQIPGVVENGLFIDICDTVIIGYGDGNVETRD 237
>gi|49479122|ref|YP_036880.1| ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|67461414|sp|Q6HHU6|RPIA_BACHK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|49330678|gb|AAT61324.1| ribose 5-phosphate isomerase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 220
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 133/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE +
Sbjct: 1 MDLKQIAGEYAATFVKDGMKVGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + F++D N IVD
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIVDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|228927843|ref|ZP_04090891.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228831906|gb|EEM77495.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 220
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ +G Q +P+S+ TE K
Sbjct: 1 MNLKQLAGEYAAYFVNDGMKIGLGTGSTVYWTIQKLGERVKDGLSFQAVPTSKETEALAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ ++I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELLIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T ++ + + LR + +F++D N IVD
Sbjct: 121 LVTHLGTFPLPVEIIPFSWKQTERKIQSLGC------QTTLRLKNNEIFITDNNNMIVDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIATPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIKEL 220
>gi|229133680|ref|ZP_04262506.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-ST196]
gi|228649715|gb|EEL05724.1| Ribose-5-phosphate isomerase A [Bacillus cereus BDRD-ST196]
Length = 221
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 130/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A YV DGM +G+GTGST + L + G Q +P+S+ TE K
Sbjct: 2 MNLKQLVGEYAANYVKDGMNIGLGTGSTVYWTIQKLGQFVQEGLYFQAVPTSKETEALAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLNIPLISLNDVQSLDLTIDGADEIDSDLQLIKGGGGALLREKIVASSSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T S ++ + + LR + F++D N I+D
Sbjct: 122 LVARLGNFPLPVEIIPFSWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV++ GLFINM AIIGT +G +
Sbjct: 176 IFPNHISNPANLHEQLKMITGVVDSGLFINMTRKAIIGTKNGIKEL 221
>gi|229196964|ref|ZP_04323704.1| Ribose-5-phosphate isomerase A [Bacillus cereus m1293]
gi|228586521|gb|EEK44599.1| Ribose-5-phosphate isomerase A [Bacillus cereus m1293]
Length = 220
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE +
Sbjct: 1 MDLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ ++I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELLIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F + S ++ + + LR + F++D N I+D
Sbjct: 121 LVTHLGTFPLPVEIIPFSWKQIESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|52142718|ref|YP_084110.1| ribose-5-phosphate isomerase A [Bacillus cereus E33L]
gi|67461363|sp|Q63AF7|RPIA_BACCZ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|51976187|gb|AAU17737.1| ribose 5-phosphate isomerase [Bacillus cereus E33L]
Length = 220
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 133/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE +
Sbjct: 1 MDLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIIDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + F++D N I+D
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|47569055|ref|ZP_00239745.1| ribose 5-phosphate isomerase [Bacillus cereus G9241]
gi|47554324|gb|EAL12685.1| ribose 5-phosphate isomerase [Bacillus cereus G9241]
Length = 220
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 93/226 (41%), Positives = 130/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE
Sbjct: 1 MNLKQLAGEYAAYFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAH 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ ++I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELLIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T ++ + + LR + +F++D N IVD
Sbjct: 121 LVTHLGTFPLPVEIIPFSWKQTERKIQSLGC------QTTLRLKNNEIFITDNNNMIVDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIATPSALHKRLKMITGVVETGLFVNMTSKAIIGTKNGIKEL 220
>gi|218233920|ref|YP_002367509.1| ribose-5-phosphate isomerase A [Bacillus cereus B4264]
gi|218161877|gb|ACK61869.1| ribose 5-phosphate isomerase [Bacillus cereus B4264]
Length = 220
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGTFPLPIEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNLIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M IIG +G +
Sbjct: 175 IFPNHISNPVHLHTQLKMITGVVETGLFISMTSKVIIGAKNGIKEL 220
>gi|259502657|ref|ZP_05745559.1| ribose 5-phosphate isomerase A [Lactobacillus antri DSM 16041]
gi|259169302|gb|EEW53797.1| ribose 5-phosphate isomerase A [Lactobacillus antri DSM 16041]
Length = 227
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 129/233 (55%), Gaps = 8/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
M+ ++K R +++Y+ GM +G+GTGST + + L ++ G + + +S T
Sbjct: 1 MNQDELKAQTGRESVKYIQSGMIVGLGTGSTVRYMVDELGKQVQEGKLTDIIGVTTSTRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ I + +DV +DL IDG DE+ + IKG GGALL EKI+A+A+++ I I
Sbjct: 61 AKQARDLGITIKDIDDVDHIDLCIDGADEVSDDFQGIKGGGGALLWEKIVANASNKIIWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V LG+ LP+E+ FG + L++ + R +G F++D N
Sbjct: 121 VDESKLVHKLGKFPLPVEVIPFGAQLVFNRLEKKGY------KPSWRMDGDHKFLTDEKN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YI+D G I P ++ EL ++ G++E GLF+N V+ I+GT DG ++ +
Sbjct: 175 YIIDLHLGEIDHPVELADELIHMVGLVETGLFLNRVNDVIVGTQDGPKVLHAR 227
>gi|308188018|ref|YP_003932149.1| ribosephosphate isomerase [Pantoea vagans C9-1]
gi|308058528|gb|ADO10700.1| ribosephosphate isomerase [Pantoea vagans C9-1]
Length = 219
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA + + V S +T+
Sbjct: 1 MTQDELKKAVGWAALDYVQPGTVVGVGTGSTAAHFIDALA-TVRHQIEGAVSSSDASTQK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + ++ + + +DG DEI+ ++++IKG G AL REKI+A A FI I D
Sbjct: 60 LKSL-GIQVFDLNEIDLLSVYVDGADEINPQMQMIKGGGAALTREKIVAAVAETFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LGR LP+E+ + G E R V+D GN I
Sbjct: 119 ASKEVDVLGRFPLPVEVIPMARSYVARQ----LVKMGGLPEYRQN------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + +PGV+ GLF D A+IG DG + +
Sbjct: 169 LDVHNLRILDPIELEKTINALPGVVTVGLFAARGADIALIGGPDGVKTIKK 219
>gi|163733300|ref|ZP_02140743.1| ribose 5-phosphate isomerase A [Roseobacter litoralis Och 149]
gi|161393088|gb|EDQ17414.1| ribose 5-phosphate isomerase A [Roseobacter litoralis Och 149]
Length = 262
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ K A+RA Q+V +GM +G+GTGSTA + L +++ G + +P+S T
Sbjct: 9 DKAKFVCAKRAAQFVENGMRVGLGTGSTAAWLVRCLGERVRDEGLHITGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + + +DL+IDG DE D LIKG GGALL EK++A ++ R IVI D
Sbjct: 69 REVGIDVITLDAAKRLDLTIDGADEFDGAFNLIKGGGGALLHEKVVATSSDRMIVIADVG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG+ T + + E L + LR +G FV+D GN+I+
Sbjct: 129 KEVETLGAFPLPIEVIPFGLQTTHALVDETLVSMDVLGRDSSLRMDGDKPFVTDEGNHII 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I D + ++ L +PGV+E+GLFI++ D ++G DG+ V
Sbjct: 189 DLHLKRIGDARQLAMTLNQLPGVVENGLFIDICDTVVLGFGDGKVEVRD 237
>gi|228934067|ref|ZP_04096908.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228825581|gb|EEM71373.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 221
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L ++ G +Q +P+S+ TE +
Sbjct: 1 MDLKQIAGEYAATFVKDGMKIGLGTGSTTYWTIQKLGQRVKEGLSIQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T S ++ + + LR + F++D N I+D
Sbjct: 121 VVTRLGTFPLPIEIIPFAWKQTESKIQSLGC------QTTLRLKNNETFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F IP P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|126175493|ref|YP_001051642.1| ribose-5-phosphate isomerase A [Shewanella baltica OS155]
gi|160876620|ref|YP_001555936.1| ribose-5-phosphate isomerase A [Shewanella baltica OS195]
gi|217972251|ref|YP_002357002.1| ribose-5-phosphate isomerase A [Shewanella baltica OS223]
gi|304410321|ref|ZP_07391940.1| ribose 5-phosphate isomerase [Shewanella baltica OS183]
gi|307301968|ref|ZP_07581726.1| ribose 5-phosphate isomerase [Shewanella baltica BA175]
gi|166229237|sp|A3D7R0|RPIA_SHEB5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|189043826|sp|A9L0P5|RPIA_SHEB9 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808719|sp|B8E4U3|RPIA_SHEB2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|125998698|gb|ABN62773.1| ribose-5-phosphate isomerase [Shewanella baltica OS155]
gi|160862142|gb|ABX50676.1| ribose 5-phosphate isomerase [Shewanella baltica OS195]
gi|217497386|gb|ACK45579.1| ribose 5-phosphate isomerase [Shewanella baltica OS223]
gi|304351730|gb|EFM16129.1| ribose 5-phosphate isomerase [Shewanella baltica OS183]
gi|306914006|gb|EFN44427.1| ribose 5-phosphate isomerase [Shewanella baltica BA175]
gi|315268817|gb|ADT95670.1| ribose 5-phosphate isomerase [Shewanella baltica OS678]
Length = 220
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVERDSIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V + + +DG DEI+ R+ +IKG G AL REKI+A A +FI I D
Sbjct: 59 KMKALGIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVDILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ I GV+ +GLF D ++GT DG
Sbjct: 169 LDVYNLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVGTPDGVKT 216
>gi|21466109|pdb|1LKZ|A Chain A, Crystal Structure Of D-Ribose-5-Phosphate Isomerase (Rpia)
From Escherichia Coli.
gi|21466110|pdb|1LKZ|B Chain B, Crystal Structure Of D-Ribose-5-Phosphate Isomerase (Rpia)
From Escherichia Coli.
gi|28374109|pdb|1O8B|A Chain A, Structure Of Escherichia Coli Ribose-5-Phosphate
Isomerase, Rpia, Complexed With Arabinose-5-Phosphate.
gi|28374110|pdb|1O8B|B Chain B, Structure Of Escherichia Coli Ribose-5-Phosphate
Isomerase, Rpia, Complexed With Arabinose-5-Phosphate
Length = 219
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 2 TQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGT--XKGQIEGAVSSSDASTEK 59
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K I + +V S+ + +DG DEI+ + IKG G AL REKIIA A +FI I D
Sbjct: 60 LKSLGIHVFDLNEVDSLGIYVDGADEINGHXQXIKGGGAALTREKIIASVAEKFICIADA 119
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+VD LG+ LP+E+ + G E R V+D GN I+
Sbjct: 120 SKQVDILGKFPLPVEVIPXARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVIL 169
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
D I DP + IPGV+ GLF N D A+IGT DG +++
Sbjct: 170 DVHGXEILDPIAXENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 219
>gi|206973562|ref|ZP_03234480.1| ribose 5-phosphate isomerase A [Bacillus cereus H3081.97]
gi|206747718|gb|EDZ59107.1| ribose 5-phosphate isomerase A [Bacillus cereus H3081.97]
Length = 221
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 129/225 (57%), Gaps = 7/225 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+K+ A A +V DGM +G+GTGSTA + L ++ G +Q +P+S+ TE K
Sbjct: 3 NLKQLADEYAANFVKDGMKVGLGTGSTAYWAIQKLGQRVKEGLSIQAVPTSKETEALAKQ 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+IPL DV +DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 63 LNIPLILLNDVQRLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESKF 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LP+EI F +T ++ + + LR + +F++D N IVD
Sbjct: 123 VTRLGTFPLPVEIIPFSWKQTERKIQSLGC------QTTLRLKNNEIFITDNNNMIVDCI 176
Query: 185 FG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 177 FPNHIATPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 221
>gi|228985885|ref|ZP_04146033.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773814|gb|EEM22232.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 220
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 131/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE K
Sbjct: 1 MNLKQLAGEYAAYFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ ++I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELLIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T ++ + + LR + +F++D N IVD
Sbjct: 121 LVTHLGTFPLPVEIIPFSWKQTERKIQSLGC------QTTLRLKNNEIFITDNNNMIVDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I P + L I GV+E GLF+NM AIIGT +G +
Sbjct: 175 IFPNHIATPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQEL 220
>gi|229173442|ref|ZP_04300986.1| Ribose-5-phosphate isomerase A [Bacillus cereus MM3]
gi|228610136|gb|EEK67414.1| Ribose-5-phosphate isomerase A [Bacillus cereus MM3]
Length = 220
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 131/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L + G Q +P+S+ TE K
Sbjct: 1 MNLKQLAGEYAANFVKDGMNIGLGTGSTVYWTIQKLGQFVQEGLYFQAVPTSKETEALAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSDLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T S ++ + + LR + F++D N I+D
Sbjct: 121 LVTRLGNFPLPVEIIPFSWKQTESKIQSLGC------QTTLRFKNNETFITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV++ GLFINM AIIGT +G +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVDSGLFINMTKKAIIGTKNGIKEL 220
>gi|146294021|ref|YP_001184445.1| ribose-5-phosphate isomerase A [Shewanella putrefaciens CN-32]
gi|166229240|sp|A4Y9L3|RPIA_SHEPC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|145565711|gb|ABP76646.1| ribose-5-phosphate isomerase [Shewanella putrefaciens CN-32]
Length = 220
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G +G+GTGST F+ LA + + V S +T+
Sbjct: 1 MTQDEMKKAAGWAALKYVEEGSIVGVGTGSTVNHFIDALA-TMKDDIEGAVSSSEASTQK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP++ V + + +DG DEI+ R+ +IKG G AL REKI+A A +FI I D
Sbjct: 60 MKAL-GIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+V+ LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVNILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + I +P+ + ++ I GV+ +GLF D ++GT DG K
Sbjct: 169 LDVYNLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVGTPDGVKTFTAK 220
>gi|83643933|ref|YP_432368.1| ribose-5-phosphate isomerase A [Hahella chejuensis KCTC 2396]
gi|123534615|sp|Q2SN31|RPIA_HAHCH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|83631976|gb|ABC27943.1| ribose 5-phosphate isomerase A [Hahella chejuensis KCTC 2396]
Length = 225
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ ++K+ A+ A+ Y+ LG+GTGSTA F+ LA+ + F + SS
Sbjct: 1 MNQDELKQAVAKAALDYIKPHLQSDTILGIGTGSTANYFIDALAE-VRTQFE-GAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H+IP++ VS ++ IDG DE + RL LIKG G AL REKI+A A FI
Sbjct: 59 ASAERLKKHNIPVYELNSVSGLEFYIDGADETNPRLELIKGGGAALTREKIVAANAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD LG LPIE+ + G + R V+D
Sbjct: 119 CIADESKWVDVLGDFPLPIEVIPMARSYVARE----LVKLGGDPVYREG------CVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
GN I+D F I +P + ++ I GV+ +GLF D ++G+ +G +
Sbjct: 169 GNIILDVFNLRILEPVKLEQQINQITGVVTNGLFAMRPADVLLLGSQEGVKTI 221
>gi|22127178|ref|NP_670601.1| ribose-5-phosphate isomerase A [Yersinia pestis KIM 10]
gi|45443346|ref|NP_994885.1| ribose-5-phosphate isomerase A [Yersinia pestis biovar Microtus
str. 91001]
gi|51597500|ref|YP_071691.1| ribose-5-phosphate isomerase A [Yersinia pseudotuberculosis IP
32953]
gi|108806349|ref|YP_650265.1| ribose-5-phosphate isomerase A [Yersinia pestis Antiqua]
gi|108813274|ref|YP_649041.1| ribose-5-phosphate isomerase A [Yersinia pestis Nepal516]
gi|145597905|ref|YP_001161981.1| ribose-5-phosphate isomerase A [Yersinia pestis Pestoides F]
gi|149367075|ref|ZP_01889108.1| ribose 5-phosphate isomerase A [Yersinia pestis CA88-4125]
gi|153949354|ref|YP_001399839.1| ribose-5-phosphate isomerase A [Yersinia pseudotuberculosis IP
31758]
gi|162419523|ref|YP_001608131.1| ribose-5-phosphate isomerase A [Yersinia pestis Angola]
gi|165924862|ref|ZP_02220694.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937245|ref|ZP_02225809.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010214|ref|ZP_02231112.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212843|ref|ZP_02238878.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400024|ref|ZP_02305542.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419161|ref|ZP_02310914.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425348|ref|ZP_02317101.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470321|ref|ZP_02335025.1| ribose 5-phosphate isomerase A [Yersinia pestis FV-1]
gi|170023107|ref|YP_001719612.1| ribose-5-phosphate isomerase A [Yersinia pseudotuberculosis YPIII]
gi|186896622|ref|YP_001873734.1| ribose-5-phosphate isomerase A [Yersinia pseudotuberculosis PB1/+]
gi|218928088|ref|YP_002345963.1| ribose-5-phosphate isomerase A [Yersinia pestis CO92]
gi|229837604|ref|ZP_04457766.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis
Pestoides A]
gi|229840828|ref|ZP_04460987.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842612|ref|ZP_04462767.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903732|ref|ZP_04518845.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis
Nepal516]
gi|270487514|ref|ZP_06204588.1| ribose 5-phosphate isomerase A [Yersinia pestis KIM D27]
gi|294502919|ref|YP_003566981.1| ribose-5-phosphate isomerase A [Yersinia pestis Z176003]
gi|30173353|sp|Q8ZHH8|RPIA1_YERPE RecName: Full=Ribose-5-phosphate isomerase A 1; AltName:
Full=Phosphoriboisomerase A 1; Short=PRI 1
gi|67461565|sp|Q666Q7|RPIA1_YERPS RecName: Full=Ribose-5-phosphate isomerase A 1; AltName:
Full=Phosphoriboisomerase A 1; Short=PRI 1
gi|238691350|sp|B2K0R4|RPIA_YERPB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|21960242|gb|AAM86852.1|AE013931_5 ribosephosphate isomerase [Yersinia pestis KIM 10]
gi|45438215|gb|AAS63762.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Microtus
str. 91001]
gi|51590782|emb|CAH22428.1| Ribose 5-phosphate isomerase A [Yersinia pseudotuberculosis IP
32953]
gi|108776922|gb|ABG19441.1| ribose-5-phosphate isomerase [Yersinia pestis Nepal516]
gi|108778262|gb|ABG12320.1| ribose-5-phosphate isomerase [Yersinia pestis Antiqua]
gi|115346699|emb|CAL19582.1| ribose 5-phosphate isomerase A [Yersinia pestis CO92]
gi|145209601|gb|ABP39008.1| ribose-5-phosphate isomerase [Yersinia pestis Pestoides F]
gi|149290689|gb|EDM40765.1| ribose 5-phosphate isomerase A [Yersinia pestis CA88-4125]
gi|152960849|gb|ABS48310.1| ribose 5-phosphate isomerase A [Yersinia pseudotuberculosis IP
31758]
gi|162352338|gb|ABX86286.1| ribose 5-phosphate isomerase A [Yersinia pestis Angola]
gi|165914719|gb|EDR33332.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923062|gb|EDR40213.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990700|gb|EDR43001.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206135|gb|EDR50615.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963155|gb|EDR59176.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050732|gb|EDR62140.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055748|gb|EDR65532.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749641|gb|ACA67159.1| ribose 5-phosphate isomerase [Yersinia pseudotuberculosis YPIII]
gi|186699648|gb|ACC90277.1| ribose 5-phosphate isomerase [Yersinia pseudotuberculosis PB1/+]
gi|229679502|gb|EEO75605.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis
Nepal516]
gi|229690922|gb|EEO82976.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697194|gb|EEO87241.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229704292|gb|EEO91303.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis
Pestoides A]
gi|262360954|gb|ACY57675.1| ribose-5-phosphate isomerase A [Yersinia pestis D106004]
gi|262364894|gb|ACY61451.1| ribose-5-phosphate isomerase A [Yersinia pestis D182038]
gi|270336018|gb|EFA46795.1| ribose 5-phosphate isomerase A [Yersinia pestis KIM D27]
gi|294353378|gb|ADE63719.1| ribose-5-phosphate isomerase A [Yersinia pestis Z176003]
gi|320014005|gb|ADV97576.1| ribose 5-phosphate isomerase, constitutive [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 218
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + IP+ DV +D+ +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSYGIPVFDCNDVDVLDIYVDGADEINGQMQMIKGGGAALTREKIIAAIARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+V LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ESKQVGVLGKFPLPVEVIPMARSYVARE----LIKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I D + ++ I GV+ GLF N D A+IGT++G ++
Sbjct: 169 LDVHNLSILDAIALENQINGIAGVVTVGLFANRGADVALIGTANGVKVI 217
>gi|238759304|ref|ZP_04620470.1| Ribose-5-phosphate isomerase A [Yersinia aldovae ATCC 35236]
gi|238702465|gb|EEP95016.1| Ribose-5-phosphate isomerase A [Yersinia aldovae ATCC 35236]
Length = 220
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDELKKAVGWAALEYVTPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V +D+ +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSLGIQVFDCNEVDVLDIYVDGADEINGQMQMIKGGGAALTREKIIAAIARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LGR LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDVLGRFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I D + ++ I GV+ GLF N D A+IGT+DG ++ K
Sbjct: 169 LDVHNLTILDAIALENKINGIAGVVTVGLFANRGADVALIGTADGVRTIIAK 220
>gi|94501489|ref|ZP_01308007.1| ribose 5-phosphate isomerase A [Oceanobacter sp. RED65]
gi|94426307|gb|EAT11297.1| ribose 5-phosphate isomerase A [Oceanobacter sp. RED65]
Length = 225
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 115/236 (48%), Gaps = 17/236 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ Q+K+ + A+ Y+ +G+GTGSTA F+ LA+ + N F + SS
Sbjct: 1 MNQDQLKQAVGQAAVDYIKPHLQKDSIIGVGTGSTANCFIDALAE-LKNDFD-GAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ ++D IDG DE + L+LIKG GGAL REKI+A A FI
Sbjct: 59 ATAERLKSHGIPVYDLNSSGTLDFYIDGADETNDHLQLIKGGGGALTREKIVAACAKEFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD LG LP+E+ + G + R FV+D
Sbjct: 119 CIADESKWVDLLGTFPLPVEVIPMARSYVARE----LVALGGDPVYRQG------FVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQK 231
GN I+D I + + NI GV+ +GLF D ++GT+DG + K
Sbjct: 169 GNVILDVHNMSIQSATALEERINNIVGVVTNGLFACRPADVLLMGTADGVKTIKAK 224
>gi|229097307|ref|ZP_04228269.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-29]
gi|228686118|gb|EEL40034.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-29]
Length = 221
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A +V DGM +G+GTGST + L + +G Q +P+S+ TE K
Sbjct: 2 MNLKQLVGEYAANFVKDGMNIGLGTGSTVYWTIQKLGQLVQDGLYFQAVPTSKETEALAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S +V S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLNIPLISLNNVQSLDLTIDGADEIDSDLQLIKGGGGALLREKIVASSSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T S ++ + + LR +G F++D N I+D
Sbjct: 122 LVARLGNFPLPVEIIPFSWKQTESKIQSLGC------QTTLRIKNNGTFITDNNNMIIDC 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV++ GLFINM AIIGT +G +
Sbjct: 176 IFPNHISNPANLHEQLKMITGVVDSGLFINMTKKAIIGTKNGIKEL 221
>gi|261338239|ref|ZP_05966123.1| ribose 5-phosphate isomerase A [Bifidobacterium gallicum DSM 20093]
gi|270276891|gb|EFA22745.1| ribose 5-phosphate isomerase A [Bifidobacterium gallicum DSM 20093]
Length = 232
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 128/234 (54%), Gaps = 9/234 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + V DGM +G+GTGST + + L ++ G + + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLVKDGMIVGLGTGSTVRFLVDELGRRVQEEGLQFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + + +DV +D++IDG DE+D IKG G ALL EKI+A + + +
Sbjct: 61 RTQEQAEGYGIKIVNVDDVEEIDVTIDGADEVDDNFNGIKGGGAALLWEKIVAINSKKIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V+ +G+ LP+E+ FG + +++ G LRL +G ++D
Sbjct: 121 WIVDESKVVETIGKFPLPVEVIPFGHGHVVEKMEKK----GYKPVLRLDADG-NPVLTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
NY+VD I P + +L N+ GV+E GLF+NMVD I+G DG ++
Sbjct: 176 KNYVVDLHLEKIEKPFELQEDLINMVGVVETGLFLNMVDEVIVGDPDGPRILTN 229
>gi|183601982|ref|ZP_02963351.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis HN019]
gi|219682894|ref|YP_002469277.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190470|ref|YP_002967864.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241195876|ref|YP_002969431.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218867|gb|EDT89509.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis HN019]
gi|219620544|gb|ACL28701.1| ribose 5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis AD011]
gi|240248862|gb|ACS45802.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250430|gb|ACS47369.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178196|gb|ADC85442.1| Ribose 5-phosphate isomerase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|295793457|gb|ADG32992.1| ribose-5-phosphate isomerase A [Bifidobacterium animalis subsp.
lactis V9]
Length = 233
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 125/234 (53%), Gaps = 9/234 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD MK+ A A + V GM +G+GTGST + + L + G + +SR
Sbjct: 1 MDKAQQDAMKKEAGIEAAKLVKSGMIVGLGTGSTVRFLVDELGRRKQEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + + +DV +DL IDG DE+D IKG G ALL EKI+A ++R +
Sbjct: 61 RTQEQAEGYGIKIVNIDDVDHIDLCIDGADEVDKNFNGIKGGGAALLWEKIVAINSNRIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD +G+ LP+E+ FG + +KE G N LRL G +D
Sbjct: 121 WIVDASKLVDVIGKFPLPVEVIPFGAMHVIERMKER----GYNPTLRLDAEGK-PVRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
NY+VD I DP ++ +L N+ GV+E GLF++MV+ I+G +G ++
Sbjct: 176 NNYVVDLHLERIDDPAGLNEDLINMVGVVEDGLFLDMVNEVIVGDPNGPRTLIN 229
>gi|329850320|ref|ZP_08265165.1| ribose 5-phosphate isomerase A [Asticcacaulis biprosthecum C19]
gi|328840635|gb|EGF90206.1| ribose 5-phosphate isomerase A [Asticcacaulis biprosthecum C19]
Length = 230
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 131/228 (57%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K A++YV GM +G+GTGSTA F+ +A ++ G ++ ++ +S T
Sbjct: 1 MTVDEQKEAVGEAALKYVKPGMKVGLGTGSTAAWFVKAIAREVEAGLKLTLVSTSVQTTQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + DV ++DL +DG DE+ L LIKG GGALLREK+I A +VI D
Sbjct: 61 LAESLGLTIKDINDVGTLDLCVDGADEVGDGLALIKGGGGALLREKLIWEQARTCVVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V LG+ LPIE++ F T++ + +V F +++ +R+ +++DGGN I
Sbjct: 121 AAKHVPVLGKFPLPIEVEPFAWKGTVNRISDVLVEFDIDKLPIMRKKDGQPWITDGGNLI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
D G I DP + L ++ GV++HGLF+++ + A+I T DG +V
Sbjct: 181 FDVACGRIEDPSGLGAALKSVTGVVDHGLFLDLAEVALIATPDGVRIV 228
>gi|228965730|ref|ZP_04126810.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228793989|gb|EEM41512.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 220
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L + + G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGEYVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL + DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLITLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AIIGT +G +
Sbjct: 175 IFSNHISNPAHLQTQLKMITGVVETGLFISMTSKAIIGTKNGIKEL 220
>gi|148642344|ref|YP_001272857.1| ribose-5-phosphate isomerase A [Methanobrevibacter smithii ATCC
35061]
gi|222444468|ref|ZP_03606983.1| hypothetical protein METSMIALI_00079 [Methanobrevibacter smithii
DSM 2375]
gi|148551361|gb|ABQ86489.1| ribose 5-phosphate isomerase, RpiA [Methanobrevibacter smithii ATCC
35061]
gi|222434033|gb|EEE41198.1| hypothetical protein METSMIALI_00079 [Methanobrevibacter smithii
DSM 2375]
Length = 221
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ +K+ A +A +YV DG LG+GTGST F+ + +IA G V IP+S +
Sbjct: 1 MNLKKEAGYKAAEYVTDGDILGLGTGSTTHYFIEAVGKRIADEGINVMGIPTSFQSLLLA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
K +IP+ S E+ +DL++DG DE+D L L+KG G A +EKI+ ++A +FIVI DES
Sbjct: 61 KQWNIPVTSLEEHD-IDLAVDGADEVDKNLNLVKGGGAAHTKEKIVDYSAKQFIVIVDES 119
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ +G +P+E+ + + G E+R+ G ++D GN+++D
Sbjct: 120 KYVEEIGNFPVPVEVIPDASRVVI----QTLEDMGAECEIRMGERKDGPVITDNGNFVID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
A F I P + +L +IPGV+E+G+F MVD IIGTS+G +
Sbjct: 176 AKFEKIESPMHLEIDLNSIPGVVENGIFTQMVDKVIIGTSEGIKEL 221
>gi|238754583|ref|ZP_04615937.1| Ribose-5-phosphate isomerase A [Yersinia ruckeri ATCC 29473]
gi|238707214|gb|EEP99577.1| Ribose-5-phosphate isomerase A [Yersinia ruckeri ATCC 29473]
Length = 219
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ L I N V S +T
Sbjct: 1 MTQDELKKAVGWAALEYVKPGTIVGVGTGSTAAHFIDALG-SIKNQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V +D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSLGIHVFDSNEVDGLDIYVDGADEINGHMQMIKGGGAALTREKIIAAMARQFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
+D + I D + ++ I GV+ GLF N D A++GT++G V+
Sbjct: 169 LDVYNLNIMDAIALENKINGIAGVVTVGLFANRGADIALVGTAEGVKKVI 218
>gi|119025379|ref|YP_909224.1| ribose-5-phosphate isomerase A [Bifidobacterium adolescentis ATCC
15703]
gi|166991515|sp|A1A0A9|RPIA_BIFAA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|118764963|dbj|BAF39142.1| ribose-5-phosphate isomerase A [Bifidobacterium adolescentis ATCC
15703]
Length = 232
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + +GM G+GTGST + + L ++ G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLIQNGMIAGLGTGSTVRFLVDELGRRVKEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQEQAEGYGIKIVNIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL NG +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGQVVKKFE----AKGYKPVLRLDANGE-PVRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NY+VD I PQ ++ +L GV+EHGLF+NMVD I+G +G
Sbjct: 176 NNYVVDLHLERIDHPQELAQDLITTVGVVEHGLFLNMVDQVIVGDPNG 223
>gi|238787344|ref|ZP_04631143.1| Ribose-5-phosphate isomerase A [Yersinia frederiksenii ATCC 33641]
gi|238724606|gb|EEQ16247.1| Ribose-5-phosphate isomerase A [Yersinia frederiksenii ATCC 33641]
Length = 220
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 115/232 (49%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTAAHFIDALGS--IKGQIEGAVSSSDASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +V +D+ +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSYGIQVFDCNEVDVLDIYVDGADEINGQMQMIKGGGAALTREKIIAAIARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LGR LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDVLGRFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I D + ++ I GV+ GLF N D A+IGT+DG V+ K
Sbjct: 169 LDVHNLTILDAIALENKINGIAGVVTVGLFANRGADVALIGTADGVKTVVLK 220
>gi|228997714|ref|ZP_04157321.1| Ribose-5-phosphate isomerase A [Bacillus mycoides Rock3-17]
gi|229009069|ref|ZP_04166408.1| Ribose-5-phosphate isomerase A [Bacillus mycoides Rock1-4]
gi|228752239|gb|EEM01928.1| Ribose-5-phosphate isomerase A [Bacillus mycoides Rock1-4]
gi|228762058|gb|EEM10997.1| Ribose-5-phosphate isomerase A [Bacillus mycoides Rock3-17]
Length = 221
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+KR A A +V DGM +G+GTGST + L I+ G +Q +P+S T+
Sbjct: 3 DLKRLAGEYAADFVKDGMKIGLGTGSTVYWTIQKLGQLISEGLTIQAVPTSIETQKLAVQ 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL DV +DL+IDG DEI+ L LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 63 LSIPLIPLSDVDYLDLTIDGADEINPNLHLIKGGGGALLREKIVATSSQKLIIIADESKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LPIEI F +T ++ + LR + F++D GN I+D
Sbjct: 123 VKDLGTFPLPIEIVPFAWEQTAKRIQSFGC------QTILRTQNNQPFITDNGNMILDCV 176
Query: 185 FGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P ++ + GVIE GLFINMV+ AII T G ++
Sbjct: 177 FPNQITNPIETHQQVKIVTGVIETGLFINMVNKAIIATEKGIKVL 221
>gi|229116303|ref|ZP_04245693.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock1-3]
gi|228667135|gb|EEL22587.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock1-3]
Length = 221
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 130/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A +V DGM +G+GTGST + L + G Q +P+S+ TE K
Sbjct: 2 MNLKQLVGEYAANFVKDGMNIGLGTGSTVYWTIQKLGQLVQEGLYFQAVPTSKETEALAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLNIPLISLNDVQSLDLTIDGADEIDSDLQLIKGGGGALLREKIVASSSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T S ++ + + LR + F++D N I+D
Sbjct: 122 LVARLGNFPLPVEIIPFSWKQTESKVQSLGC------QTTLRIKNNETFITDNNNMIIDC 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV++ GLFINM AIIGT +G +
Sbjct: 176 IFPNHISNPANLHEQLKMITGVVDSGLFINMTRKAIIGTKNGIKEL 221
>gi|294497793|ref|YP_003561493.1| ribose 5-phosphate isomerase A [Bacillus megaterium QM B1551]
gi|294347730|gb|ADE68059.1| ribose 5-phosphate isomerase A [Bacillus megaterium QM B1551]
Length = 222
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 136/225 (60%), Gaps = 6/225 (2%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ +A Q+V DGM +G+GTGSTA ++ L +++ NG ++ +P+S+ TE +
Sbjct: 4 KQAVGEKAAQFVEDGMIVGLGTGSTAYYTIVKLGERVKNGLNIKAVPTSQKTEELARKLG 63
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IP+ + DV +D++IDG DE+DS L LIKG GGALLREK+IA+AA RFIVI D K V
Sbjct: 64 IPIVTLADVEYIDIAIDGADEVDSELSLIKGGGGALLREKMIAYAAKRFIVIADSKKIVK 123
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG LP+E+ +FG T + G +LRL + F++D GNYI+D F
Sbjct: 124 TLGAFPLPVEVIRFGWEMTA----KHIRSAGCVPQLRL-LDDHTPFITDNGNYILDCHFS 178
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P + +L IPGV+E GLF+ M + I + + +++K
Sbjct: 179 EIENPAELEKQLIRIPGVVESGLFVGMTEEVIT-VQNQDVHIIKK 222
>gi|229103395|ref|ZP_04234077.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-28]
gi|228679891|gb|EEL34086.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-28]
Length = 221
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A +V DGM +G+GTGST + L + +G Q +P+S+ TE K
Sbjct: 2 MNLKQLVGEYAANFVKDGMNIGLGTGSTVYWTIQKLGQLVQDGLYFQAVPTSKETEALAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S +V S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLNIPLISLNNVQSLDLTIDGADEIDSDLQLIKGGGGALLREKIVASSSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T S ++ + + LR +G F++D N I+D
Sbjct: 122 LVARLGNFPLPVEIIPFSWKQTESKIQSLGC------QTTLRIKNNGTFITDNNNMIIDC 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV++ GLFINM AIIGT +G +
Sbjct: 176 IFPNHISNPANLHEQLKMITGVVDSGLFINMTRKAIIGTKNGIKEL 221
>gi|188534928|ref|YP_001908725.1| Ribose-5-phosphate isomerase A 1 (Phosphoriboisomerase A 1)
[Erwinia tasmaniensis Et1/99]
gi|238689738|sp|B2VF17|RPIA_ERWT9 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|188029970|emb|CAO97854.1| Ribose-5-phosphate isomerase A 1 (Phosphoriboisomerase A 1)
[Erwinia tasmaniensis Et1/99]
Length = 219
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVTPGTIVGVGTGSTAAHFIDALA-SIKHQIEGTVSSSEMSTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + IP+ ++ ++ L +DG DEI+ ++++IKG G AL REKIIA A RFI I D
Sbjct: 60 L-KAYGIPVFDLNEIDALSLYVDGADEINGQMQMIKGGGAALTREKIIAAVADRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG LP+E+ + G E R ++D GN I
Sbjct: 119 ESKQVDVLGHFPLPVEVIPMARSYVARE----LVKLGGLPEYRQD------VITDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + I DP + + + GV+ GLF D A+IGT+DG + +
Sbjct: 169 LDVYNLSIIDPIRLETAINALTGVVTVGLFAARGADVALIGTADGVKTIKK 219
>gi|163940542|ref|YP_001645426.1| ribose-5-phosphate isomerase A [Bacillus weihenstephanensis KBAB4]
gi|229564294|sp|A9VID8|RPIA_BACWK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|163862739|gb|ABY43798.1| ribose 5-phosphate isomerase [Bacillus weihenstephanensis KBAB4]
Length = 221
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 96/225 (42%), Positives = 130/225 (57%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGMT+G+GTGST + L ++ G +Q +P+S+ TE K
Sbjct: 2 MNLKQLAGEYAAGFVRDGMTIGLGTGSTVYWTIQKLGHRVQEGLSIQAVPTSKETEVLAK 61
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S ++ +DL+IDG DEI++ L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 62 QLSIPLISLNEIDILDLTIDGADEINNDLQLIKGGGGALLREKIVATSSKELIIIADESK 121
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T ++ + E LR S F++D GN I+D
Sbjct: 122 LVSHLGTFPLPIEIISFSWKQTEKRIQSLGC------ETHLRMKDSRPFITDNGNLIIDC 175
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
F I +P EL I GV+E GLFINM AIIGT +G
Sbjct: 176 IFPNKILNPNDTHTELKMITGVVETGLFINMKSKAIIGTKNGIKE 220
>gi|238795128|ref|ZP_04638718.1| Ribose-5-phosphate isomerase A [Yersinia intermedia ATCC 29909]
gi|238725527|gb|EEQ17091.1| Ribose-5-phosphate isomerase A [Yersinia intermedia ATCC 29909]
Length = 220
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTAAHFIDALG-SIKGQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +V +D+ +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSYGIHVFDCNEVDVLDIYVDGADEINGQMQMIKGGGAALTREKIIAAIARQFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I D + ++ I GV+ GLF N D A+IGT+DG + K
Sbjct: 169 LDVHNLSILDAIALENKINGIAGVVTVGLFANRGADVALIGTADGVKTIKLK 220
>gi|322384174|ref|ZP_08057884.1| ribose 5-phosphate isomerase A-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321151066|gb|EFX44383.1| ribose 5-phosphate isomerase A-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 215
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 115/216 (53%), Gaps = 9/216 (4%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
MD K+ AA A+ V DGMTLG+GTGST F+ LA + G ++ + +S T
Sbjct: 1 MDEQNNQKKRAAEEAVHLVEDGMTLGLGTGSTVFYFLQALARR--RGLNIRGVSTSGQTT 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL D +DL+IDG DE+D R++ IKG GGALL EKI+A + + I
Sbjct: 59 RLASKLGIPLVKLGDTGGLDLTIDGADEVDERMQGIKGGGGALLYEKIVASYSRYNVWIV 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D KRV LG+ LP+E+ F + + + RLR G F++D N
Sbjct: 119 DSGKRVKQLGKFPLPVEVVPFALRPVQELFRHKEW------KPRLRLKGDTPFLTDSQNV 172
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVD 215
I+D I DP ++G+L IPGV+EHGLF+ M
Sbjct: 173 ILDLHLQSISDPAALAGQLNAIPGVVEHGLFLGMAS 208
>gi|312869702|ref|ZP_07729849.1| ribose 5-phosphate isomerase A [Lactobacillus oris PB013-T2-3]
gi|311094751|gb|EFQ53048.1| ribose 5-phosphate isomerase A [Lactobacillus oris PB013-T2-3]
Length = 227
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 128/233 (54%), Gaps = 8/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
M+ ++K R +++Y+ GM +G+GTGST + + L ++ G + + +S T
Sbjct: 1 MNQDELKAQTGRESVKYIKSGMIVGLGTGSTVRYMVDELGKQVQEGKLTDIIGVTTSTRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ I + +DV +DL IDG DE+ + IKG GGALL EKI+A+A+++ I I
Sbjct: 61 AKQARDLGITIKDIDDVDHIDLCIDGADEVSDDFQGIKGGGGALLWEKIVANASNKIIWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V LG+ LP+E+ FG + L++ + R +G F++D N
Sbjct: 121 VDESKLVHKLGKFPLPVEVIPFGAQLVFNRLEKKGY------KPSWRMDGDHKFLTDEKN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YI+D I P ++ EL ++ G++E GLF+N V+ I+GT DG ++ +
Sbjct: 175 YIIDLHLEEIDHPVELADELIHMVGLVETGLFLNRVNDVIVGTQDGPKVLHAR 227
>gi|229085581|ref|ZP_04217816.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-44]
gi|228697729|gb|EEL50479.1| Ribose-5-phosphate isomerase A [Bacillus cereus Rock3-44]
Length = 221
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 91/225 (40%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+KR A ++ DGM +G+GTGST + L I+ G +Q + +S TE +
Sbjct: 3 NLKRKVGEYAADFIKDGMKIGLGTGSTVYWTIQKLGQLISEGLTIQAVATSIETEKLAEQ 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV +DL+IDG DEI+ L +IKG GGALLREKI+A ++ + I+I DESK
Sbjct: 63 LSIPLISLSDVDYLDLTIDGADEINPDLHVIKGGGGALLREKIVATSSKKLIIIADESKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LPIEI F +T ++ + + LR + F++D GN I+D
Sbjct: 123 VKDLGTFPLPIEIVPFAWEQTAKRIQSLGC------QTILRIQNNQAFITDNGNMILDCV 176
Query: 185 F-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P +L + GVIE GLFINMVD AI+ T G +
Sbjct: 177 FQNRIKNPIDTHQQLKMLTGVIETGLFINMVDKAILATEKGIKEL 221
>gi|261345612|ref|ZP_05973256.1| ribose 5-phosphate isomerase A [Providencia rustigianii DSM 4541]
gi|282566093|gb|EFB71628.1| ribose 5-phosphate isomerase A [Providencia rustigianii DSM 4541]
Length = 219
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V S+D+ +DG DE+D+ + +IKG G AL REKI++ A F+ I D
Sbjct: 59 KLKSLGIPVFDCNNVDSLDVYVDGADEVDNNMNMIKGGGAALTREKIVSAIAKTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK VD LG+ LP+E+ + L ++ E + ++D GN I
Sbjct: 119 QSKLVDVLGKFPLPVEVIPMARSYVARELVKLGGQPVYRENV----------ITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP + ++ I GV+ GLF N D ++GT++G +
Sbjct: 169 LDVHNLKILDPVALENKINGIAGVVTVGLFANRGADVVLMGTAEGVKTI 217
>gi|310766515|gb|ADP11465.1| Ribose-5-phosphate isomerase A 1 (Phosphoriboisomerase A 1)
[Erwinia sp. Ejp617]
Length = 219
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVTPGTVVGVGTGSTAAHFIDALA-SIKHQIEGTVSSSELSTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + IP+ ++ + L +DG DEI+ ++++IKG G AL REKIIA A RFI I D
Sbjct: 60 L-KAYGIPVFDLNEIDVLSLYVDGADEINGQMQMIKGGGAALTREKIIAAVADRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ESKQVDVLGHFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + + GV+ GLF D A+IGT++G + +
Sbjct: 169 LDVHNLNIIDPIRLETAINALTGVVTVGLFAARGADVALIGTANGVQTIKK 219
>gi|295703168|ref|YP_003596243.1| ribose 5-phosphate isomerase A [Bacillus megaterium DSM 319]
gi|294800827|gb|ADF37893.1| ribose 5-phosphate isomerase A [Bacillus megaterium DSM 319]
Length = 222
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 137/225 (60%), Gaps = 6/225 (2%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ +A Q+V DGM +G+GTGSTA ++ L +++ NG ++ +P+S+ TE +
Sbjct: 4 KQAVGEKAAQFVEDGMIVGLGTGSTAYYTIVKLGERVKNGLHIKAVPTSQKTEELARKLG 63
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IP+ + DV +D++IDG DE+DS+L LIKG GGALLREK+IA+AA RFIVI D K V
Sbjct: 64 IPIVTLADVEYIDIAIDGADEVDSKLSLIKGGGGALLREKMIAYAAKRFIVIADSKKIVK 123
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG LP+E+ +FG T + G +LRL + F++D GNYI+D F
Sbjct: 124 TLGAFPLPVEVIRFGWEMTA----KHIRSAGCVPQLRL-LDDHTPFITDNGNYILDCHFS 178
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P + +L IPGV+E GLF+ M + I + + +++K
Sbjct: 179 EIENPAELEKQLIRIPGVVESGLFVGMTEEVIT-VQNQDVYIIKK 222
>gi|183599858|ref|ZP_02961351.1| hypothetical protein PROSTU_03377 [Providencia stuartii ATCC 25827]
gi|188022131|gb|EDU60171.1| hypothetical protein PROSTU_03377 [Providencia stuartii ATCC 25827]
Length = 218
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSEASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV S+D+ +DG DEID +IKG G AL REKI+A A F+ I D
Sbjct: 59 KLKSLGIPVLDCNDVDSLDVYVDGADEIDHHKNMIKGGGAALTREKIVAAIAKTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ESKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGVPEYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP + ++ I GV+ GLF N D ++GTS+G +
Sbjct: 169 LDVHNLSIVDPVALENKINAIAGVVTVGLFANRGADIVLMGTSEGVKTI 217
>gi|24372733|ref|NP_716775.1| ribose-5-phosphate isomerase A [Shewanella oneidensis MR-1]
gi|30173293|sp|Q8EHR7|RPIA_SHEON RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|24346802|gb|AAN54220.1|AE015559_4 ribose 5-phosphate isomerase [Shewanella oneidensis MR-1]
Length = 219
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVEKDSIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V + + +DG DEI+ + +IKG G AL REKI+A A +F+ I D
Sbjct: 59 KMKALGIPVYDLNSVDKLSVYVDGADEINGHMDMIKGGGAALTREKIVAAVAEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 NTKQVDILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ I GV+ +GLF D ++GT +G
Sbjct: 169 LDVYNLKILNPKELEDKINAIVGVVTNGLFAKRGADVLLVGTPEGVKT 216
>gi|158423982|ref|YP_001525274.1| ribose 5-phosphate isomerase [Azorhizobium caulinodans ORS 571]
gi|158330871|dbj|BAF88356.1| ribose 5-phosphate isomerase [Azorhizobium caulinodans ORS 571]
Length = 292
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 106/228 (46%), Positives = 147/228 (64%), Gaps = 1/228 (0%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
DA ++KR AA +A++YV DGM LG+GTGSTAK F+ LLA+++A G +V +P+S T+
Sbjct: 63 DAEELKRAAAAKALEYVTDGMRLGLGTGSTAKHFVALLAERVAAGLKVTGVPTSEQTKAQ 122
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+PL + +++ +DL IDG DEI L LIKG GGALLREKI+A AA IVI DE
Sbjct: 123 ALSLGVPLATLDELPELDLCIDGADEIGPELALIKGGGGALLREKIVASAAREMIVIADE 182
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYI 180
+K V LGR LPIE+ FGV LK + G + EL+LR G F++D GN I
Sbjct: 183 TKTVATLGRFPLPIEVVTFGVEAIKLRLKGAIATAGCDGELKLRHKADGKPFITDQGNVI 242
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
VDA G IPDP+ ++ L + GV+EHGLF+ + A++ ++G ++
Sbjct: 243 VDAHLGRIPDPRALARALEEVAGVVEHGLFLGLARRAVLAGANGISVI 290
>gi|254486470|ref|ZP_05099675.1| ribose 5-phosphate isomerase A [Roseobacter sp. GAI101]
gi|214043339|gb|EEB83977.1| ribose 5-phosphate isomerase A [Roseobacter sp. GAI101]
Length = 262
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA Q+V DGM +G+GTGSTA + L + + + G R++ +P+S T
Sbjct: 9 DKAKFVAAKRAAQFVEDGMRVGLGTGSTAAWLVRCLGEMVRDDGLRIKGVPTSTRTAQLA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D
Sbjct: 69 REVGIEVISLDEAKWLDLTIDGADEFDGELNLIKGGGGALLQEKIVATASDQMVVIADIG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG T + ++E L LR NG F++D GNYI+
Sbjct: 129 KEVETLGAFPLPIEVIPFGWQTTQALVEETLISMDVLGRTSTLRMNGDIPFITDEGNYIM 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + +S + +PGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLHLNRIGNARQLSLVMNQMPGVVENGLFIDICDAVVIGFGDGRVEVRD 237
>gi|83945638|ref|ZP_00957984.1| ribose-5-phosphate isomerase A [Oceanicaulis alexandrii HTCC2633]
gi|83851004|gb|EAP88863.1| ribose-5-phosphate isomerase A [Oceanicaulis alexandrii HTCC2633]
Length = 235
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 145/233 (62%), Gaps = 5/233 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
M A++ K AA A+++V DGMTLG+G+GSTA F+ LL + +G V+ +P+S NT
Sbjct: 1 MSAVEQKTRAAEAALEFVEDGMTLGLGSGSTADIFVRLLGAALESGSLKNVKGVPTSENT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ +PL + +D++IDG DE+D R RLIKG GG LLREKIIAHA+ +V+
Sbjct: 61 ARVAREAGVPLLEVDQADKIDVTIDGADEVDGRFRLIKGGGGCLLREKIIAHASDLMVVV 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGL-NEELRLRRNGSG--LFVSD 175
DE+K V+ LG LP+E+D FG T + + + G+ +++LR G G +++D
Sbjct: 121 VDETKLVETLGAFALPVEVDPFGFTITAKKVYDALTASGVVRPDVKLRCRGDGNDPYLTD 180
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
GGNYI+D + DP+ ++ L IPGV+EHGLFIN+ I+G DG ++
Sbjct: 181 GGNYILDCACTALEDPEQVAARLNAIPGVVEHGLFINLARAVIVGEEDGARVL 233
>gi|254522924|ref|ZP_05134979.1| ribose 5-phosphate isomerase A [Stenotrophomonas sp. SKA14]
gi|219720515|gb|EED39040.1| ribose 5-phosphate isomerase A [Stenotrophomonas sp. SKA14]
Length = 215
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 113/219 (51%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV DGM +G+GTGST F+ LA +I + + V S ++T K
Sbjct: 3 EAKRLAAEKAIEYVEDGMIVGVGTGSTVAYFIDALA-RIQHRIKGAVSSSEQSTARL-KQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVIELNHSGNLSLYVDGADECDPNKCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LP+E+ + ++++ G R V+D GN I+D
Sbjct: 121 VPVLGAFPLPVEVIPMARSLVARQIRDMT---GGQPTWREG------VVTDNGNQILDIH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTS 222
I DP+ + EL +PGV+ GLF D I+G
Sbjct: 172 NLQITDPEKLERELNQLPGVVCVGLFARRRADVVIVGGE 210
>gi|331701836|ref|YP_004398795.1| ribose-5-phosphate isomerase A [Lactobacillus buchneri NRRL
B-30929]
gi|329129179|gb|AEB73732.1| Ribose-5-phosphate isomerase A [Lactobacillus buchneri NRRL
B-30929]
Length = 227
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 125/230 (54%), Gaps = 7/230 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENF 61
++K++ + A++++ DGMT+G+GTGST K + L +++ + +P+S T
Sbjct: 4 QDELKQSVGKAAVKFIEDGMTVGLGTGSTVKFMVDALGERVKSEHLSIVGVPTSERTREQ 63
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
I +++ +DL+IDG DEI+ + IKG G A L EKI+A + + + I D
Sbjct: 64 ANSLGIKTKGLDEIDHIDLTIDGADEINRTFQGIKGGGAAHLWEKIVAINSDKNMWIVDS 123
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK VD LG LP+E+ +G ++ L G + + R+ NG +D NY++
Sbjct: 124 SKMVDELGSFPLPLEVIPYGSHQLLKR----LDAKGYHPKFRM--NGDQYVKTDSNNYVI 177
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D G I P ++ EL + G++EHGLF+++V+ I+G DG + +
Sbjct: 178 DLHLGQIERPHHLALELDQMTGIVEHGLFLDLVNTVIVGREDGPQTIQAR 227
>gi|238798641|ref|ZP_04642116.1| Ribose-5-phosphate isomerase A [Yersinia mollaretii ATCC 43969]
gi|238717527|gb|EEQ09368.1| Ribose-5-phosphate isomerase A [Yersinia mollaretii ATCC 43969]
Length = 219
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTAAHFIDALG-SIKDQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +V +D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSYGIHVFDCNEVDVLDIYVDGADEINGHMQMIKGGGAALTREKIIAAIARQFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ATKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + ++ I GV+ GLF N D A+IGT++G +++
Sbjct: 169 LDVHNLTILDAIALENKINGIAGVVTVGLFANRGADVALIGTAEGVKTIVK 219
>gi|300718226|ref|YP_003743029.1| ribose-5-phosphate isomerase A [Erwinia billingiae Eb661]
gi|299064062|emb|CAX61182.1| Ribose-5-phosphate isomerase A [Erwinia billingiae Eb661]
Length = 219
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +TE
Sbjct: 1 MTQDELKKAVGWAALDYVTPGTIVGVGTGSTAAHFIDALG-SIKHQIDGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + ++ S+ + +DG DEI+ +++IKG G AL REKII+ A +F+ I D
Sbjct: 60 L-KSLGIQVFDLNEIDSLSVYVDGADEINGMMQMIKGGGAALTREKIISAVADKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG LP+E+ + G E R ++D GN I
Sbjct: 119 ESKQVDVLGGFPLPVEVIPMARSFVARE----LVKLGGLPEYR------QHVLTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + +PGV+ GLF D A+IGT++G +++
Sbjct: 169 LDVHNLKILDPIALEKAINALPGVVTVGLFAARCADVALIGTANGVKTIVK 219
>gi|88858288|ref|ZP_01132930.1| ribose 5-phosphate isomerase A [Pseudoalteromonas tunicata D2]
gi|88819905|gb|EAR29718.1| ribose 5-phosphate isomerase A [Pseudoalteromonas tunicata D2]
Length = 218
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA A++YV +G+GTGST F+ L G + SS +
Sbjct: 1 MTQDEMKKAAAWAALEYVEKDSIIGVGTGSTVNHFIDALGT--IKGDIRGAVSSSEASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV + + +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 59 KLKALGIEIFELNDVDGLSVYVDGADEINPANEMIKGGGAALTREKIVAAVAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 SSKQVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPMYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D F I + + ++ I GV+ +GLF D I+GT DG ++
Sbjct: 169 LDVFNLQISQAKQLEQQINQIVGVVTNGLFAARGADVVIVGTPDGPKIL 217
>gi|163750330|ref|ZP_02157571.1| ribose-5-phosphate isomerase A [Shewanella benthica KT99]
gi|161330002|gb|EDQ00987.1| ribose-5-phosphate isomerase A [Shewanella benthica KT99]
Length = 218
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALQYVEKDTIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSAASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V+ + + +DG DEI+ R+ +IKG G AL REKIIA A +FI I D
Sbjct: 59 KMKALGIPVYDLNSVNELSVYVDGADEINERMDMIKGGGAALTREKIIAAVAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+V LG LP+E+ + G + R ++D GN I
Sbjct: 119 NTKQVAILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------CLTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I P+ + ++ I GV+ +GLF N D ++GT +G V
Sbjct: 169 LDVYNMKIMKPKELEEQINQIVGVVTNGLFANRGADVLLVGTPEGVKTV 217
>gi|238752295|ref|ZP_04613774.1| Ribose-5-phosphate isomerase A [Yersinia rohdei ATCC 43380]
gi|238709456|gb|EEQ01695.1| Ribose-5-phosphate isomerase A [Yersinia rohdei ATCC 43380]
Length = 220
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + DV +D+ +DG DEI+ ++++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSYGIQVFDCNDVDVLDIYVDGADEINGQMQMIKGGGAALTREKIIAAIARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I D + ++ I GV+ GLF N D A+IGT++G V+ K
Sbjct: 169 LDVHNLTILDAIALENKINGIAGVVTVGLFANRGADVALIGTAEGVKTVVLK 220
>gi|253690044|ref|YP_003019234.1| ribose 5-phosphate isomerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259494152|sp|C6DF34|RPIA_PECCP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|251756622|gb|ACT14698.1| ribose 5-phosphate isomerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 219
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV +G+GTGSTA F+ L I + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALDYVRPDTIVGVGTGSTAAHFIDALG-SIKHQIKGAVSSSDASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V S+D+ +DG DEI+ +++IKG G AL REKII+ + +FI I D
Sbjct: 60 L-KSLGIPVFDANEVDSLDVYVDGADEINGHMQMIKGGGAALTREKIISALSRQFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G R V+D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGQPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A++GTS+G V++
Sbjct: 169 LDVHNLNIMDAIAVENHINGIPGVVTVGLFANRGADVALVGTSEGVKTVVK 219
>gi|117919427|ref|YP_868619.1| ribose-5-phosphate isomerase A [Shewanella sp. ANA-3]
gi|166229241|sp|A0KTU4|RPIA_SHESA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|117611759|gb|ABK47213.1| ribose-5-phosphate isomerase [Shewanella sp. ANA-3]
Length = 219
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVEKDSIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V + + +DG DEI+ + +IKG G AL REKI+A A +F+ I D
Sbjct: 59 KMKALGIPVYDLNSVDKLSVYVDGADEINGHMDMIKGGGAALTREKIVAAVAEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG+ LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVDILGKFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ I GV+ +GLF D ++GT +G
Sbjct: 169 LDVYNLKIINPKELEEKINAIVGVVTNGLFAKRGADVLLVGTPEGVKT 216
>gi|268316029|ref|YP_003289748.1| ribose 5-phosphate isomerase [Rhodothermus marinus DSM 4252]
gi|262333563|gb|ACY47360.1| ribose 5-phosphate isomerase [Rhodothermus marinus DSM 4252]
Length = 236
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 7/232 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENF 61
A + K+ A + V GM LG+GTGSTA + L ++ G RV +P+S E
Sbjct: 8 ADRAKKAAGEKVAAMVEPGMRLGLGTGSTAAWAIRALGRRVREEGLRVVGVPTSYAAEQL 67
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IPL + DV ++DL+ DG DE+ L LIKG G A REK++A A RF+V+ DE
Sbjct: 68 ARAEGIPLVTLADVEALDLAFDGADEVSPELNLIKGRGAAHTREKVVASLARRFVVLVDE 127
Query: 122 SKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD R +PIE+ L L+ G LR+ + G V+D G ++
Sbjct: 128 SKLVDRLGTRWPVPIEVLPMAAEPVLRQLRR----MGAEPVLRMGKCKDGPVVTDQGFWV 183
Query: 181 VDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+DA F G I DP ++ L +PGV++HGLF+ + ++G +DG+ +++
Sbjct: 184 IDARFPGGIDDPHALAVTLSTMPGVLDHGLFLGLATDVLVGQADGQVRHIRR 235
>gi|320106308|ref|YP_004181898.1| ribose 5-phosphate isomerase [Terriglobus saanensis SP1PR4]
gi|319924829|gb|ADV81904.1| ribose 5-phosphate isomerase [Terriglobus saanensis SP1PR4]
Length = 232
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 126/222 (56%), Gaps = 4/222 (1%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K AA A++++ GM +G+G+GSTA F+ LL +K+ G ++ I SS ++
Sbjct: 3 TQDELKLQAAHEALRFIEPGMVVGLGSGSTATLFIKLLGEKVKKGLVIRGIASSEDSAKL 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
IP+ + +D++IDG DE+ L LIKG GG LLREKI+A A+ +FIV+ D
Sbjct: 63 GAELGIPIIDFHSATEIDVTIDGADEVAPGLALIKGGGGKLLREKIVASASKKFIVVADA 122
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LPIE+ + GL+ ++R ++GSG +++D GN I+
Sbjct: 123 SKLVQTLGKFPLPIEVIPMAQPLV----SKKLELLGLHSKIRQAKDGSGNYITDEGNLIL 178
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
D I DP + ++ I GV+EHGLFIN + A+I
Sbjct: 179 DCGPTVIEDPIALGEKISAITGVVEHGLFINFANLALIAGES 220
>gi|228991610|ref|ZP_04151553.1| Ribose-5-phosphate isomerase A [Bacillus pseudomycoides DSM 12442]
gi|228768113|gb|EEM16733.1| Ribose-5-phosphate isomerase A [Bacillus pseudomycoides DSM 12442]
Length = 221
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+KR A A +V DGM +G+GTGST + L I+ G +Q +P+S TE
Sbjct: 3 DLKRLAGEYAADFVKDGMKIGLGTGSTVYWTIQKLGQLISEGLTIQAVPTSIETEKLAVQ 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL +V +DL+IDG DEI+ L LIKG GGALLREKI+A ++ + I+I DESK
Sbjct: 63 LSIPLIPLSNVDYLDLTIDGADEINPNLHLIKGGGGALLREKIVATSSQKLIIIADESKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LPIEI F +T ++ + LR + F++D GN I+D
Sbjct: 123 VKDLGTFPLPIEIVPFAWEQTAKRIQSFGC------QTILRTQNNPPFITDNGNMILDCV 176
Query: 185 FGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P ++ + GVIE GLFINMV+ AII T G ++
Sbjct: 177 FPNQITNPIETHQQVKIVTGVIETGLFINMVNKAIIATEKGIKVL 221
>gi|219120917|ref|XP_002185690.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582539|gb|ACI65160.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 287
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
D ++K+ +A+ YV GM +G+GTGSTA + + +K+ +G V IP+S T
Sbjct: 47 DQDELKKQVGYKAVDDYVKSGMVVGLGTGSTAYYAVERVGEKLKSGELKDVLAIPTSIRT 106
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + + S +D++IDG D +D L L KG GGAL REKI+ A +FIVI
Sbjct: 107 KEQAESLGIPLVTLDTHSKLDVAIDGADGVDPELNLTKGGGGALFREKIVEICADKFIVI 166
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR------NGSGL 171
DESK D +P+EI F T+ + E+ SC G LR+ +G +
Sbjct: 167 VDESKLCDGLGPGFPIPVEILPFCHEHTMRVIGELPSCKGCKPVLRMGSSTNNQVDGDEI 226
Query: 172 FVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+SD GNY+VD F I DP ++ EL N+ GV+EHGLF M II +DG
Sbjct: 227 AISDNGNYLVDLHFEDPIKDPAKMAQELKNVVGVVEHGLFCGMSTAVIIAGADG 280
>gi|285017577|ref|YP_003375288.1| ribose-5-phosphate isomerase a protein [Xanthomonas albilineans GPE
PC73]
gi|283472795|emb|CBA15300.1| probable ribose-5-phosphate isomerase a protein [Xanthomonas
albilineans]
Length = 215
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV DGM +G+GTGST F+ L +I + + V S +T +
Sbjct: 3 EAKRLAAEKAIEYVEDGMIVGVGTGSTVAYFIDALG-RIGHRLKGAVSSSEHSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIDVLELNHTGTLSLYVDGADECDPNKCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LPIE+ + E+ + G R ++D GN I+D
Sbjct: 121 VQTLGAFPLPIEVIPMARSLVAR---EILARSGGQPVWRDG------VITDNGNVILDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTS 222
I DP + EL IPGV+ GLF D I+G
Sbjct: 172 HLSISDPLTLERELNQIPGVVCVGLFAHRRADVVIVGGE 210
>gi|302837760|ref|XP_002950439.1| hypothetical protein VOLCADRAFT_104693 [Volvox carteri f.
nagariensis]
gi|300264444|gb|EFJ48640.1| hypothetical protein VOLCADRAFT_104693 [Volvox carteri f.
nagariensis]
Length = 270
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 134/235 (57%), Gaps = 8/235 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
++K+ AA +A+ YV GM +G+GTGSTA + + + G + +P+S T
Sbjct: 34 SQDELKKLAAWKAVDYVKSGMVVGLGTGSTAAFAVDRIGQLLKEGKLTNIVGVPTSIRTY 93
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + ++ +D++IDG DE+D L ++KG GGALLREK++ A+++F+ I
Sbjct: 94 EQALSLGIPLATLDEQPKLDVAIDGADEVDPNLDVVKGRGGALLREKMVEMASAKFVCIV 153
Query: 120 DESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D+SK VD + +P+EI QF TL L+ + G E +LR NG +V+D
Sbjct: 154 DDSKLVDGLGGSKLAMPVEIVQFCHKYTLQRLQNLPEVKGC--EAKLRMNGDKPYVTDNS 211
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F I D S + + GV++HGLF++MVD II ++G V ++
Sbjct: 212 NYIVDLYFQTPIVDSHAASKAILALEGVVDHGLFLDMVDVCIIAGANG-VEVKER 265
>gi|227114286|ref|ZP_03827942.1| ribose-5-phosphate isomerase A [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 219
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV +G+GTGSTA F+ L I + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALDYVRPDTIVGVGTGSTAAHFIDALG-SIKHQIKGAVSSSDASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV S+D+ +DG DEI+ +++IKG G AL REKII+ + +FI I D
Sbjct: 60 L-KSLGIPVFDANDVDSLDVYVDGADEINGHMQMIKGGGAALTREKIISAMSRQFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + + G R ++D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LAKLGGQPVYRQG------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + IPGV+ GLF N D A++GT++G V++
Sbjct: 169 LDVHNLNIMDAVAVENHINGIPGVVTVGLFANRGADVALVGTAEGVKTVVK 219
>gi|283782797|ref|YP_003373551.1| ribose 5-phosphate isomerase A [Gardnerella vaginalis 409-05]
gi|297242931|ref|ZP_06926869.1| ribose-5-phosphate isomerase A [Gardnerella vaginalis AMD]
gi|283441607|gb|ADB14073.1| ribose 5-phosphate isomerase A [Gardnerella vaginalis 409-05]
gi|296889142|gb|EFH27876.1| ribose-5-phosphate isomerase A [Gardnerella vaginalis AMD]
Length = 232
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 9/234 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + V +GM +G+GTGST + + L ++ G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKIVKNGMMVGLGTGSTVRFLVDELGRRVKEEGLSFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +V +D++IDG DE+D IKG G ALL EKI+A + R +
Sbjct: 61 RTQEQAEGYGIKILDINEVDHIDVTIDGSDEVDKNFNGIKGGGAALLWEKIVAINSDRIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD +G+ LP+E+ FG + + ++ G LRL +G +D
Sbjct: 121 WIVDASKVVDTIGKFPLPVEVIPFGSAQVIRKFEKR----GYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N++VD I PQ ++ +L GV+EHGLF+NMVD I+G +G +
Sbjct: 176 NNFVVDLHMERIEHPQELAKDLIETVGVVEHGLFLNMVDTVIVGDPNGPRTLTN 229
>gi|238763237|ref|ZP_04624202.1| Ribose-5-phosphate isomerase A [Yersinia kristensenii ATCC 33638]
gi|238698510|gb|EEP91262.1| Ribose-5-phosphate isomerase A [Yersinia kristensenii ATCC 33638]
Length = 220
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA I V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTAAHFIDALA-SIKGQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +V +D+ +DG DEI+S++++IKG G AL REKIIA + +FI I D
Sbjct: 60 L-KSYGIQVFDCNEVDVLDIYVDGADEINSQMQMIKGGGAALTREKIIAAISRKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I D + ++ I GV+ GLF N D A+IGT++G ++ K
Sbjct: 169 LDVHNLTILDAIALENKINGIAGVVTVGLFANRGADVALIGTAEGVKTIVLK 220
>gi|308235673|ref|ZP_07666410.1| ribose-5-phosphate isomerase A [Gardnerella vaginalis ATCC 14018]
gi|311114270|ref|YP_003985491.1| ribose-5-phosphate isomerase [Gardnerella vaginalis ATCC 14019]
gi|310945764|gb|ADP38468.1| ribose-5-phosphate isomerase [Gardnerella vaginalis ATCC 14019]
Length = 232
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 123/234 (52%), Gaps = 9/234 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + V +GM +G+GTGST + + L ++ G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKIVQNGMMVGLGTGSTVRFLVDELGRRVKEEGLSFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + DV +D++IDG DE+D IKG G ALL EKI+A + R +
Sbjct: 61 RTQEQAEGYGIKILDINDVDHIDVTIDGSDEVDKNFDGIKGGGAALLWEKIVAINSDRIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD +G+ LP+E+ FG + + ++ G LRL +G +D
Sbjct: 121 WIVDASKVVDTIGKFPLPVEVIPFGSAQVIRKFEKR----GYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N++VD I PQ ++ +L GV+EHGLF+NMVD I+G +G +
Sbjct: 176 NNFVVDLHLERIEHPQELAKDLIETVGVVEHGLFLNMVDTVIVGDPNGPRTLTN 229
>gi|289207733|ref|YP_003459799.1| ribose 5-phosphate isomerase [Thioalkalivibrio sp. K90mix]
gi|288943364|gb|ADC71063.1| ribose 5-phosphate isomerase [Thioalkalivibrio sp. K90mix]
Length = 220
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++ + G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDEMKKAVAEAALERIESGWIVGVGTGSTANYFIDALAR--IKGKIDGAVASSEASAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + + + +DG DE L L KG GGAL REKI+A A+ F+ + D
Sbjct: 59 RLRGHGIEVLDLNSAGPLPIYVDGADEATRHLHLTKGGGGALTREKIVAAASKTFVCVVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K VD+LG LP+E+ + AL + G N ELR F +D GN I
Sbjct: 119 ETKVVDYLGAFPLPVEVIPMARSHVARALSK----LGGNPELREG------FKTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I +P + EL +I GV+ +GLF D ++G+ G + K
Sbjct: 169 LDVHNLRIMNPVELESELDHIAGVVTNGLFARRPADVMLVGSPAGVEEMTAK 220
>gi|113969318|ref|YP_733111.1| ribose-5-phosphate isomerase A [Shewanella sp. MR-4]
gi|114046518|ref|YP_737068.1| ribose-5-phosphate isomerase A [Shewanella sp. MR-7]
gi|122944056|sp|Q0HLL3|RPIA_SHESM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123030848|sp|Q0HXZ4|RPIA_SHESR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|113884002|gb|ABI38054.1| ribose-5-phosphate isomerase [Shewanella sp. MR-4]
gi|113887960|gb|ABI42011.1| ribose-5-phosphate isomerase [Shewanella sp. MR-7]
Length = 219
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVEKDSIVGVGTGSTVNHFIDALATMKAD--IEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V + + +DG DEI+ + +IKG G AL REKI+A A +F+ I D
Sbjct: 59 KMKALGIPVYDLNSVDKLSVYVDGADEINGHMDMIKGGGAALTREKIVAAVAEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVDILGEFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ I GV+ +GLF D ++GT +G
Sbjct: 169 LDVYNLKIINPKELEEKINAIVGVVTNGLFAKRGADVLLVGTPEGVKT 216
>gi|256823687|ref|YP_003147650.1| ribose 5-phosphate isomerase [Kangiella koreensis DSM 16069]
gi|256797226|gb|ACV27882.1| ribose 5-phosphate isomerase [Kangiella koreensis DSM 16069]
Length = 219
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YVVD +G+GTGST F+ LA + + + V S +TE
Sbjct: 1 MTQDELKKLVGEAALEYVVDDSIVGVGTGSTVNYFIDALA-TMKHKIKGAVSSSEASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + +V + + +DG DE + L LIKG GGAL REKIIA AA +FI I D
Sbjct: 60 L-KKHGIEVFELNEVGKLPVYVDGADESNHLLELIKGGGGALTREKIIAAAADQFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG LP+E+ + + + G + R FV+D GN I
Sbjct: 119 ESKLVRRLGEFPLPVEVIPMARSYVARQIVK----LGGDPVYRTG------FVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D I +P + L NI GV+ +GLF ++ +G+ + +
Sbjct: 169 LDVHGLVINEPIKLERILNNIVGVVTNGLFAERAADVLLLGKEGKVETITR 219
>gi|168051490|ref|XP_001778187.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670400|gb|EDQ56969.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 316
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA--NGFRVQVIPSSRNTE 59
+KR A++AI+ V GM +G+GTGST+ + L + I + + +S ++
Sbjct: 70 SQDNLKRAVAKKAIELVKSGMVVGLGTGSTSSMAIEELGNLIQANKLKDIVGVATSYQSK 129
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + DV+ +D++ DG DE+DS + LIKG G A EK++ A +++
Sbjct: 130 VLARQFGVKTVDLNDVNHIDIAFDGADEVDSGMSLIKGGGAAHTMEKVVDSIAKECVILI 189
Query: 120 DESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DE+K V LG +P+E+ F + L A + G E+R G ++D GN
Sbjct: 190 DETKVVKTLGLSFPVPVEVLPFALAPVLRA----LAALGGQPEIRTALRKDGPVITDLGN 245
Query: 179 YIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+VD F + DP + ++ IPGVI++GLFIN+ ++GT DG+
Sbjct: 246 MVVDVRFPEGVKDPAEMETKINMIPGVIDNGLFINVAHKVLVGTKDGDET 295
>gi|73670621|ref|YP_306636.1| ribose-5-phosphate isomerase A [Methanosarcina barkeri str. Fusaro]
gi|72397783|gb|AAZ72056.1| ribose-5-phosphate isomerase [Methanosarcina barkeri str. Fusaro]
Length = 232
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 83/226 (36%), Positives = 127/226 (56%), Gaps = 7/226 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
KR A A + V GM +G+GTGST + L ++ G + + +S +E
Sbjct: 13 KRAAGIAASRMVESGMVVGLGTGSTVAYTIKELGRRVRDEGLEILGVVTSYQSETLAIEA 72
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + S +D++IDG D++DS+L IKG G A REKI++ +A RF+V+ DESK
Sbjct: 73 GIPLTTLAQHSELDIAIDGADQVDSKLHAIKGGGAAHTREKIVSASARRFLVVADESKTS 132
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
L + +P+E+ F + +K+ G E RL G ++D GN+++DA F
Sbjct: 133 TQLDK-PIPVEVLPFAKTLVIKKIKQ----LGGKPEPRLALRKDGPVITDNGNFVLDANF 187
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I DP+ ++ +L +IPGV+EHG+F N VD IG DG +++K
Sbjct: 188 GVINDPEGLALQLSSIPGVVEHGIFSN-VDELYIGKKDGSVEIVKK 232
>gi|237746637|ref|ZP_04577117.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes HOxBLS]
gi|229377988|gb|EEO28079.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes HOxBLS]
Length = 225
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 117/226 (51%), Gaps = 9/226 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K + AR A++YV +G +G+GTGSTA F+ LA KI + + SS+ T
Sbjct: 1 MAQDDLKLSVARAAVKYVPEGKIIGVGTGSTANFFIDELA-KIKDRI-TGAVASSKATAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I + + +V + + IDG DEI +IKG GGAL REKIIA AA+RFI I D
Sbjct: 59 RLAAHGIRVFNLTEVEEIPVYIDGADEITRSGAMIKGGGGALTREKIIASAAARFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG+ LP+E+ G ELR+R FV+D GN I
Sbjct: 119 ESKLVATLGKFPLPVEVIPMAYKLVAGK----LDALGGRAELRIRDGK--PFVTDNGNLI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
+D F I P + ++ N GV+ GLF D ++G+ DG
Sbjct: 173 LDVFGLQIGHPLRLEEKINNFTGVVTVGLFAQRGADLCLLGSPDGV 218
>gi|218897815|ref|YP_002446226.1| ribose 5-phosphate isomerase A [Bacillus cereus G9842]
gi|228901331|ref|ZP_04065524.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis IBL 4222]
gi|218543474|gb|ACK95868.1| ribose 5-phosphate isomerase A [Bacillus cereus G9842]
gi|228858309|gb|EEN02776.1| Ribose-5-phosphate isomerase A [Bacillus thuringiensis IBL 4222]
Length = 220
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 131/226 (57%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L + + G Q +P+S+ TE +
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGEYVKEGLSFQAVPTSKETEALAQ 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+EI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGNFPLPVEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I +P + +L I GV+E GLFI+M AII T +G +
Sbjct: 175 IFSNHISNPAHLHTQLKMITGVVETGLFISMTSKAIICTKNGIKEL 220
>gi|110679207|ref|YP_682214.1| ribose-5-phosphate isomerase A [Roseobacter denitrificans OCh 114]
gi|122972840|sp|Q168R5|RPIA_ROSDO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|109455323|gb|ABG31528.1| ribose 5-phosphate isomerase A [Roseobacter denitrificans OCh 114]
Length = 262
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 127/229 (55%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ K A+RA Q V GM +G+GTGSTA + L ++ G ++ +P+S T
Sbjct: 9 DKAKFVCAKRAAQLVESGMRVGLGTGSTAAWLVRCLGQRVRNEGLQITGVPTSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + + +DL+IDG DE D LIKG GGALL EK++A ++ R +VI D
Sbjct: 69 REVGIDIITLDAAKRLDLTIDGADEFDGAFNLIKGGGGALLHEKVVAASSDRMVVIADVG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LPIE+ FG+ T + + E L + LR +G FV+D GN+I+
Sbjct: 129 KEVETLGAFPLPIEVIPFGLQTTHALVDETLVSMDVLGRDSSLRMDGDKPFVTDEGNHII 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I D + ++ L +PGV+E+GLFI++ D ++G DG+ V
Sbjct: 189 DLHLKRIGDARQLALTLNQVPGVVENGLFIDICDTVVLGFGDGKVEVRD 237
>gi|83942976|ref|ZP_00955436.1| ribose 5-phosphate isomerase [Sulfitobacter sp. EE-36]
gi|83954151|ref|ZP_00962871.1| ribose 5-phosphate isomerase [Sulfitobacter sp. NAS-14.1]
gi|83841188|gb|EAP80358.1| ribose 5-phosphate isomerase [Sulfitobacter sp. NAS-14.1]
gi|83845984|gb|EAP83861.1| ribose 5-phosphate isomerase [Sulfitobacter sp. EE-36]
Length = 262
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K AA+RA Q+V DGM +G+GTGSTA + L + + + G R++ +P+S T
Sbjct: 9 DKAKFVAAKRAAQFVEDGMRVGLGTGSTAAWLVRCLGEMVRDDGLRIKGVPTSTRTAQLA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S ++ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + +VI D
Sbjct: 69 REVGIEVISLDEAKWLDLTIDGADEFDGELNLIKGGGGALLQEKIVATASDQMVVIADIG 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ LG LP+E+ FG T + ++E L LR NG FV+D GNYI+
Sbjct: 129 KEVETLGAFPLPVEVIPFGWQTTQALVEETLVSMDVLGRNSTLRMNGDIPFVTDEGNYIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I + + ++ + +PGV+E+GLFI++ D +IG DG V
Sbjct: 189 DLHLKRIGNTRQMALVMNQMPGVVENGLFIDICDAVVIGYGDGRVEVRD 237
>gi|254429859|ref|ZP_05043566.1| ribose 5-phosphate isomerase A [Alcanivorax sp. DG881]
gi|196196028|gb|EDX90987.1| ribose 5-phosphate isomerase A [Alcanivorax sp. DG881]
Length = 217
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 115/227 (50%), Gaps = 14/227 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +K+ A A+++V +G +G+GTGSTA F+ LA + + + + SS T
Sbjct: 1 MDQDALKKQVAEAALRFVPEGEIIGVGTGSTANFFIDGLA-SLKDRIK-GAVASSEATAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + S DV ++ + +DG DE++S +IKG GGAL REKI+A AA FI I D
Sbjct: 59 RLKQHGIEVFSLNDVGNLSVYVDGADEVNSHREMIKGGGGALTREKIVAAAAREFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V LG LP+E+ + G E R FV+D GN I
Sbjct: 119 ASKQVKRLGAFPLPVEVIPMARSYVARK----LVALGGQPEYREG------FVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
+D I +P + L NI GV+ +GLF D ++G +G
Sbjct: 169 LDVHNLDITNPIELETTLNNIVGVVTNGLFAKRPADVVLVG-ENGTV 214
>gi|91792452|ref|YP_562103.1| ribose-5-phosphate isomerase A [Shewanella denitrificans OS217]
gi|123061133|sp|Q12Q96|RPIA_SHEDO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|91714454|gb|ABE54380.1| ribose-5-phosphate isomerase [Shewanella denitrificans OS217]
Length = 219
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA + + + V S +T
Sbjct: 1 MTQDEMKKAAGWAALKYVEVDSIVGVGTGSTVNHFIDALA-TMKHNIKGAVSSSVAST-E 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +VS + + +DG DEI++ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 KMKALGIDVFDLNEVSELSIYVDGADEINAHMDMIKGGGAALTREKIVAAVADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG+ LP+E+ + G + R ++D GN I
Sbjct: 119 NTKQVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPVYRQG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ I GV+ +GLF N D ++GT DG
Sbjct: 169 LDVYNLKILNPKALETQINAIVGVVTNGLFANRGADILLMGTPDGVKT 216
>gi|190575715|ref|YP_001973560.1| ribose-5-phosphate isomerase A [Stenotrophomonas maltophilia K279a]
gi|229564211|sp|B2FT30|RPIA_STRMK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|190013637|emb|CAQ47272.1| putative ribose 5-phosphate isomerase [Stenotrophomonas maltophilia
K279a]
Length = 215
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 83/219 (37%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV DGM +G+GTGST F+ LA +I + + V S ++T K
Sbjct: 3 EAKRLAAEKAIEYVEDGMIVGVGTGSTVAYFIDALA-RIQHRIKGAVSSSEQSTARL-KQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D+ LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVIELNHSGNLSLYVDGADECDANKCLIKGGGAALTREKIIAEASERFICIIDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LGR LP+E+ + ++++ G R V+D GN I+D
Sbjct: 121 VPVLGRFPLPVEVIPMARSLVARQIRDMT---GGQPTWREG------VVTDNGNQILDIH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTS 222
I DP+ + EL +PGV+ GLF D I+G
Sbjct: 172 NLQITDPEKLERELNQLPGVVCVGLFARRRADVVIVGGE 210
>gi|312143428|ref|YP_003994874.1| ribose 5-phosphate isomerase [Halanaerobium sp. 'sapolanicus']
gi|311904079|gb|ADQ14520.1| ribose 5-phosphate isomerase [Halanaerobium sp. 'sapolanicus']
Length = 222
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 6/228 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ +A +++ DGM +G+GTGSTA + + + + +G V+ +P+S+ T
Sbjct: 1 MNPKKLTGEKAAEFISDGMIIGLGTGSTAYYAIKKVGEMVRDGLNVKAVPTSKETAELAL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
I L V +DL+IDG DE+D LIKG GGALLREKI+A A + I+I DESK
Sbjct: 61 EEGIELIELSQVEKLDLTIDGADEVDPDFNLIKGGGGALLREKIVAAATEKLIIIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
VD LG +LP+E+ F T + ++ +R+ +FV+D NYI+D
Sbjct: 121 LVDKLGDFLLPVEVTPFSWQYTQKMINKMG------GSSEIRKKDGEIFVTDNDNYILDC 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
FG I P+ ++ +L IPGV+E+G+F M + ++G +DG+ VL +
Sbjct: 175 DFGKIEKPEKLTIDLNTIPGVVENGIFAKMAEVVVVGHNDGKIEVLYR 222
>gi|114319250|ref|YP_740933.1| ribose-5-phosphate isomerase A [Alkalilimnicola ehrlichii MLHE-1]
gi|122312738|sp|Q0ACJ4|RPIA_ALHEH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|114225644|gb|ABI55443.1| ribose-5-phosphate isomerase [Alkalilimnicola ehrlichii MLHE-1]
Length = 221
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A Q KR AA A++YV + +G+GTGST F+ LAD + V S +T
Sbjct: 2 MSADQGKRMAAEAAMEYVEENTVIGVGTGSTVNFFIDALAD-MKARIDGTVSSSEASTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + IP+ +V ++ + +DG DE + L+LIKG GGAL REKI+A AA RF+ + D
Sbjct: 61 L-RQYGIPVLDLNEVGTMPIYVDGADESNRFLQLIKGGGGALTREKIVAAAAERFVCVAD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LP+E+ + G +LR F +D GN I
Sbjct: 120 ESKLVDVLGEFPLPVEVIPMARSYVARE----LVKLGGRPQLRSG------FTTDNGNVI 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
+D I +P + ++ NIPGV+ +GLF + D ++GT++G +
Sbjct: 170 LDVRGLKIMEPIKLEQQINNIPGVVTNGLFALRPADVLLLGTAEGVRKL 218
>gi|212710018|ref|ZP_03318146.1| hypothetical protein PROVALCAL_01070 [Providencia alcalifaciens DSM
30120]
gi|212687225|gb|EEB46753.1| hypothetical protein PROVALCAL_01070 [Providencia alcalifaciens DSM
30120]
Length = 219
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSEASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ V S+D+ +DG DE+D + +IKG G AL REKI++ A F+ I D
Sbjct: 59 KLKSLGIPVFDCNSVDSLDVYVDGADEVDGNMNMIKGGGAALTREKIVSAIAKTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG LP+E+ + L ++ E + V+D GN I
Sbjct: 119 QSKLVGVLGNFPLPVEVIPMARSYVARELVKLGGQPVYRENV----------VTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP + ++ I GV+ GLF N D ++GT++G +
Sbjct: 169 LDVHNLKILDPVALENKINGIAGVVTVGLFANRGADVVLMGTAEGVKTI 217
>gi|158335565|ref|YP_001516737.1| ribose-5-phosphate isomerase A [Acaryochloris marina MBIC11017]
gi|158305806|gb|ABW27423.1| ribose 5-phosphate isomerase A [Acaryochloris marina MBIC11017]
Length = 235
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L D+I +G ++ IP+S K
Sbjct: 10 MKQQVGKAAADRVQSGSIVGLGTGSTTAFAIQFLGDRIKSGALTDIKGIPTSFQASVLAK 69
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + ++V + + IDG DE+D + LIKG G A REK++ A +FIV+ D+SK
Sbjct: 70 QYGIPLTTLDEVDRIHIGIDGADEVDPQKNLIKGGGAAHTREKVVDSLAEQFIVVVDQSK 129
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ + + AL++ G ELR+ G ++D GN ++D
Sbjct: 130 IVDKLGSTFPVPVEVLPMAIAPVVKALEK----LGGKPELRMGIKKDGPVITDQGNMVLD 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F IP+P + + NIPGV+E+G+F+ M D +IG DG V +
Sbjct: 186 VTFSDIPNPPELEKTINNIPGVLENGIFVGMTDIVLIGEIKDGNPTVRE 234
>gi|159045278|ref|YP_001534072.1| ribose-5-phosphate isomerase A [Dinoroseobacter shibae DFL 12]
gi|189043814|sp|A8LIN0|RPIA_DINSH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|157913038|gb|ABV94471.1| ribose-5-phosphate isomerase A [Dinoroseobacter shibae DFL 12]
Length = 260
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFC 62
+ K AA+RA+ +V DGM +G+GTGSTA + LA+ + G + + +S T
Sbjct: 9 DRAKYVAAKRAVGFVEDGMRVGLGTGSTAAWMVRHLAETVDQEGMDITCVATSTRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ + + + ++V +DL+IDG DE D L LIKG GGALL+EKI+A A+ R IVI D S
Sbjct: 69 RDLKLHVTTLDEVKWLDLTIDGADEFDPTLNLIKGGGGALLQEKIVATASDRMIVITDAS 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVA-SCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ +FG T + ++E + E LR +V+D GN+IV
Sbjct: 129 KAVATLGAFPLPVEVIRFGWETTRTLIEETLVNVDVGGREAILRMENGMPYVTDEGNFIV 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ +S L +PGV+E+GLF+++ D +IG SDG +
Sbjct: 189 DLHLERIGNPRQVSLVLNQLPGVVENGLFLDICDVVVIGKSDGSVELRD 237
>gi|157374037|ref|YP_001472637.1| ribose-5-phosphate isomerase A [Shewanella sediminis HAW-EB3]
gi|189043828|sp|A8FRN6|RPIA_SHESH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|157316411|gb|ABV35509.1| Ribose-5-phosphate isomerase [Shewanella sediminis HAW-EB3]
Length = 218
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALEYVEKDSIVGVGTGSTVNHFIDALATMKAD--IDGAVSSSEASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V + + +DG DEI++ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 KMKALGIPVYDLNSVDELSVYVDGADEINAHMDMIKGGGAALTREKIVAAVADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKEVDVLGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D + I +P+ + ++ I GV+ +GLF D ++G+ +G V
Sbjct: 169 LDVYNMKIMNPKELEEQINAIVGVVTNGLFAMRGADVLLVGSPEGVKTV 217
>gi|50122827|ref|YP_051994.1| ribose-5-phosphate isomerase A [Pectobacterium atrosepticum
SCRI1043]
gi|67461392|sp|Q6D093|RPIA_ERWCT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|49613353|emb|CAG76804.1| ribose 5-phosphate isomerase A [Pectobacterium atrosepticum
SCRI1043]
Length = 219
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV +G+GTGSTA F+ L I + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALDYVRPDTIVGVGTGSTAAHFIDALG-SIKHQIKGAVSSSDASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV S+D+ +DG DEI+ +++IKG G AL REKII+ + +FI I D
Sbjct: 60 L-KSLGIPVFDANDVDSLDVYVDGADEINGHMQMIKGGGAALTREKIISALSRQFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGQPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + I GV+ GLF N D A++GT+DG V +
Sbjct: 169 LDVHNLNIMDAVAVENHINGIAGVVTVGLFANRGADVALVGTADGVKTVTK 219
>gi|331006409|ref|ZP_08329716.1| Ribose 5-phosphate isomerase A [gamma proteobacterium IMCC1989]
gi|330419791|gb|EGG94150.1| Ribose 5-phosphate isomerase A [gamma proteobacterium IMCC1989]
Length = 227
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A+ Y+ +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDELKQAVGQAAVDYIKPKLELSSVVGVGTGSTANCFIDSLAA--IKHLFDGAVASSD 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ V + + +DG DE D L LIKG G AL REKI+A A F+
Sbjct: 59 ATAERLKSHGIPVYDLNSVDGLVVYVDGADESDKNLCLIKGGGAALTREKIVAACADEFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V LG LP+E+ + G N E R V+D
Sbjct: 119 CIADESKWVSVLGEFPLPVEVIPMARSYVARE----LVKLGGNPEYRQG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D IP+P I ++ I GV+ +GLF D ++GTS+G +
Sbjct: 169 GNVILDVHRLSIPNPVEIEKKINQIVGVVTNGLFAARSADVMLLGTSEGVKKI 221
>gi|259909577|ref|YP_002649933.1| Ribose-5-phosphate isomerase A 1 (Phosphoriboisomerase A 1)
[Erwinia pyrifoliae Ep1/96]
gi|224965199|emb|CAX56731.1| Ribose-5-phosphate isomerase A 1 (Phosphoriboisomerase A 1)
[Erwinia pyrifoliae Ep1/96]
Length = 219
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA + + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVTPGTVVGVGTGSTAAHFIDALA-SMKHQIEGTVSSSELSTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + IP+ ++ + L +DG DEI+ ++++IKG G AL REKIIA A RFI I D
Sbjct: 60 L-KAYGIPVFDLNEIDVLSLYVDGADEINGQMQMIKGGGAALTREKIIAAVADRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG LP+E+ + G E R V+D GN I
Sbjct: 119 ESKQVDVLGHFPLPVEVIPMARSYVARE----LVKLGGLPEYRQD------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + + GV+ GLF D A+IGT++G + +
Sbjct: 169 LDVHNLNIIDPIRLETAINALTGVVTVGLFAARGADVALIGTANGVQTIKK 219
>gi|30249703|ref|NP_841773.1| ribose-5-phosphate isomerase A [Nitrosomonas europaea ATCC 19718]
gi|41017699|sp|Q82TX6|RPIA_NITEU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|30180740|emb|CAD85654.1| Ribose 5-phosphate isomerase [Nitrosomonas europaea ATCC 19718]
Length = 219
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + KR A+ A+QYV G +G+GTGSTA F+ LA KI + + SS T N
Sbjct: 1 MTQDEQKRAVAQAALQYVPTGEIIGIGTGSTANLFIDELA-KIKHRIE-GAVASSEVTAN 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + V + + IDG DEI + +IKG GGAL REKI+A A +FI I D
Sbjct: 59 RLKQHGIEVLDLNSVGELPVYIDGADEITRNMHMIKGGGGALTREKIVAAVARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG+ LP+E+ + + G R F +D GN I
Sbjct: 119 QSKLVKVLGKFPLPVEVIPMARSYVARE----ITLLGGQPAWRQG------FTTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + L I GV+ +GLF + ++GT G +
Sbjct: 169 LDVHNLNIMNPVELETALNQIAGVVTNGLFARRAANVLLMGTDQGVETI 217
>gi|254473394|ref|ZP_05086791.1| ribose 5-phosphate isomerase A [Pseudovibrio sp. JE062]
gi|211957510|gb|EEA92713.1| ribose 5-phosphate isomerase A [Pseudovibrio sp. JE062]
Length = 229
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 140/228 (61%), Gaps = 1/228 (0%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
A+ +K AA A++ V GM LG+G+GST E + LLAD + +GF + +P+S ++ C
Sbjct: 2 AMSLKAQAAAAALKEVKPGMKLGIGSGSTVNEMIRLLADMVKDGFEIIGVPASSYSQALC 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+PL + ++ +DL IDG DEID +L LIKG G ALLREKIIA A+ R +VI DES
Sbjct: 62 DELGVPLTTLDETPVLDLVIDGADEIDPQLNLIKGGGAALLREKIIAAASGRMLVIADES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG+ LP+E+ FG+ T ++ GL E+ LR G V+D GNYI+D
Sbjct: 122 KIVDTLGKFPLPVEVIPFGLEATRQMMQNSLDAEGLQGEMILRMAGDKPLVTDNGNYILD 181
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP+ ++ L IPGV+EHGLFI+M A + +D E VL+
Sbjct: 182 CHLKAISDPKSLAKRLEVIPGVVEHGLFIDMAVRAYVAGTD-EIRVLE 228
>gi|307109657|gb|EFN57894.1| hypothetical protein CHLNCDRAFT_34303 [Chlorella variabilis]
Length = 275
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 140/235 (59%), Gaps = 8/235 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
D ++K+ AA +A++YV GM +G+GTGSTA + + + +G + +P+S T
Sbjct: 39 DQDELKKQAAWKAVEYVKSGMVVGLGTGSTAAFAVDRIGSLLKSGELTDIVGVPTSVRTY 98
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K IPL + ++ +D++IDG DE+D +L ++KG GGALLREK++ A+++F+ I
Sbjct: 99 EQAKSLGIPLATLDEQPKLDVAIDGADEVDPQLDVVKGRGGALLREKMVEMASAKFVCIV 158
Query: 120 DESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D+SK V+ + +P+EI QF TL+ L+ + G + LR G +V+D
Sbjct: 159 DDSKLVEGLGGSKLAMPVEIVQFCHKYTLARLQALPEVAGCVAK--LRMEGDAPYVTDNS 216
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F IPD Q S + + GV++HGLF++MVD II S+G V ++
Sbjct: 217 NYIVDLYFETPIPDSQAASAAILALEGVVDHGLFLDMVDVCIIAGSNG-VEVKER 270
>gi|298253274|ref|ZP_06977066.1| ribose-5-phosphate isomerase A [Gardnerella vaginalis 5-1]
gi|297532669|gb|EFH71555.1| ribose-5-phosphate isomerase A [Gardnerella vaginalis 5-1]
Length = 232
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 9/234 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + V +GM +G+GTGST + + L ++ G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKIVKNGMMVGLGTGSTVRFLVDELGRRVQEEGLSFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +V +D++IDG DE+D IKG G ALL EKI+A + R +
Sbjct: 61 RTQEQAEGYGIKILDINEVDHIDVTIDGSDEVDKNFNGIKGGGAALLWEKIVAINSDRIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD +G+ LP+E+ FG + + ++ G LRL +G +D
Sbjct: 121 WIVDASKVVDTIGKFPLPVEVIPFGSAQVIRKFEKR----GYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N++VD I PQ ++ +L GV+EHGLF+NMVD I+G +G +
Sbjct: 176 NNFVVDLHMERIEHPQELAKDLIETVGVVEHGLFLNMVDTVIVGDPNGPRTLTN 229
>gi|53802479|ref|YP_112887.1| ribose-5-phosphate isomerase A [Methylococcus capsulatus str. Bath]
gi|67461357|sp|Q60BV9|RPIA_METCA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|53756240|gb|AAU90531.1| ribose 5-phosphate isomerase A [Methylococcus capsulatus str. Bath]
Length = 218
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++KR A A+ YV D LG+GTGST F+ LLAD G + SS+ +
Sbjct: 1 MTQDELKRKVAEAALDYVKDVTILGVGTGSTVNHFIDLLADL--KGGIEGAVSSSQASSE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ ++D+ +DG DE+++ ++IKG G AL REKI+A A+ +F+ I D
Sbjct: 59 RLKKIGIPVLDLNAAGTLDVYVDGADEVNAAKQMIKGGGAALTREKIVAEASRKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K VD LG+ LP+E+ + L E G R ++D GN I
Sbjct: 119 ETKCVDVLGKFPLPVEVIPMARSLVARRLVE----LGGTPVWREN------CITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
+D I DP + + +IPGV+ +G+F + D +IG+ G +
Sbjct: 169 LDVHNLTITDPVELERRINDIPGVVCNGVFALRPADVVLIGSPSGVRTL 217
>gi|116493244|ref|YP_804979.1| ribose-5-phosphate isomerase A [Pediococcus pentosaceus ATCC 25745]
gi|122265292|sp|Q03E35|RPIA_PEDPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|116103394|gb|ABJ68537.1| ribose-5-phosphate isomerase [Pediococcus pentosaceus ATCC 25745]
Length = 228
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 125/225 (55%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K+ A++++ DGMT+G+GTGST K + L +++ + +P+S T
Sbjct: 1 MDQNELKKLVGEEAVKFIEDGMTVGLGTGSTVKFMVDALGERVKNENLNIVGVPTSDRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + S ++V +DL+IDG DEI S + IKG G A L EKI+A + + + I
Sbjct: 61 EQARSLGINVKSVDEVDHIDLTIDGADEISSDFQGIKGGGAAHLFEKIVATNSKKVMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG LP+E+ +G + L++ GL+ E R G ++D NY
Sbjct: 121 DESKMVDHLGAFPLPLEVIPYGSKQVFKKLEKE----GLHPEFRKNDAGE-YVLTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
++D G I P ++ L G++E GLF++MV+ I+G +G
Sbjct: 176 VIDLHLGEIKHPHQLADYLIKQVGIVEQGLFLDMVNTVIVGRQNG 220
>gi|261823110|ref|YP_003261216.1| ribose-5-phosphate isomerase A [Pectobacterium wasabiae WPP163]
gi|261607123|gb|ACX89609.1| ribose 5-phosphate isomerase [Pectobacterium wasabiae WPP163]
Length = 238
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV +G+GTGSTA F+ L I + + V S +TE
Sbjct: 20 MTQDELKKAVGWAALDYVRPDTIVGVGTGSTAAHFIDALG-SIKHQIKGAVSSSDASTEK 78
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV S+D+ +DG DEI+ +++IKG G AL REKII+ + +FI I D
Sbjct: 79 L-KSLGIPVFDANDVDSLDVYVDGADEINGHMQMIKGGGAALTREKIISALSRQFICIVD 137
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + + G R V+D GN I
Sbjct: 138 ASKQVDVLGKFPLPVEVIPMARSYVARE----LAKLGGQPVYRQG------VVTDNGNVI 187
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + + I GV+ GLF N D A++GT++G V++
Sbjct: 188 LDVHNLNIMDAVAVENHINGIAGVVTVGLFANRGADVALVGTAEGVKTVVK 238
>gi|227328003|ref|ZP_03832027.1| ribose-5-phosphate isomerase A [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 219
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV +G+GTGSTA F+ L I + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALDYVRPDTIVGVGTGSTAAHFIDALG-SIKHQIKGAVSSSDASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV S+D+ +DG DEI+ +++IKG G AL REKII+ + +FI I D
Sbjct: 60 L-KSLGIPVFDANDVDSLDVYVDGADEINGHMQMIKGGGAALTREKIISALSRQFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + + G R V+D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LAKLGGQPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
+D I D + + IPGV+ GLF N D A++GT++G V+
Sbjct: 169 LDVHNLNIMDAVAVENHINGIPGVVTVGLFANRGADVALVGTAEGVKTVV 218
>gi|291326810|ref|ZP_06125941.2| ribose 5-phosphate isomerase A [Providencia rettgeri DSM 1131]
gi|291312682|gb|EFE53135.1| ribose 5-phosphate isomerase A [Providencia rettgeri DSM 1131]
Length = 222
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 3 MTQDELKKAVGWAALDYVKPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSEASTQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+D+ +DG DE+D L +IKG G AL REKI++ A F+ I D
Sbjct: 61 KLKSLGITVFDCNEVDSLDVYVDGADEVDHHLNMIKGGGAALTREKIVSAIAKTFVCIVD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 121 ESKLVDVLGKFPLPVEVIPMARSYVARE----LVKLGGTPEYRQN------VITDNGNVI 170
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + I GV+ GLF N D ++GT++ ++
Sbjct: 171 LDVHNLNIIDPVALENTINGIAGVVTVGLFANRGADVVLMGTANEGVKTIK 221
>gi|110835467|ref|YP_694326.1| ribose 5-phosphate isomerase [Alcanivorax borkumensis SK2]
gi|122959243|sp|Q0VL94|RPIA_ALCBS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|110648578|emb|CAL18054.1| ribose 5-phosphate isomerase [Alcanivorax borkumensis SK2]
Length = 218
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +K+ A A+++V +G +G+GTGSTA F+ LA + + + + SS T
Sbjct: 1 MDQDVLKKQVAEAALRFVPEGDIIGVGTGSTANFFIDALA-TLKDRIK-GTVASSEATAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + S DV S+ + +DG DE++ +IKG GGAL REKI+A A FI I D
Sbjct: 59 RLKQHGIEVFSLNDVGSLSVYVDGADEVNQHREMIKGGGGALTREKIVAAMAKEFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V+ LG LPIE+ + G + R F++D GN I
Sbjct: 119 GSKQVNRLGAFPLPIEVIPMARSYVARK----LVALGGQPQYREG------FLTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
+D I +P + L NI GV+ +GLF D ++G G
Sbjct: 169 LDVHNLDISNPIELETTLNNIVGVVTNGLFAKRPADIVLVGEKSGAV 215
>gi|90406854|ref|ZP_01215046.1| ribose-5-phosphate isomerase A [Psychromonas sp. CNPT3]
gi|90312091|gb|EAS40184.1| ribose-5-phosphate isomerase A [Psychromonas sp. CNPT3]
Length = 218
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA A++YV G +G+GTGST F+ L K G + SS +
Sbjct: 1 MTQDEMKKAAAYAALEYVESGSIIGVGTGSTVNHFIDAL--KTIKGSIKGAVSSSEESTK 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + I + +V+ + + +DG DEI+ +IKG G AL REKI+A A +FI I D
Sbjct: 59 RLRAYGIEVFDLNEVTELSVYVDGADEINPYNAMIKGGGAALTREKIVAAVAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G R ++D GN I
Sbjct: 119 NTKNVDVLGGFPLPVEVIPMARSYVARE----LVKLGGTPIYRQG------VITDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + + GV+ +GLF N D ++GT +G +
Sbjct: 169 LDVHAMKISEPLKTETAINALAGVVTNGLFANRGADVVLVGTPEGVKTL 217
>gi|221632504|ref|YP_002521725.1| ribose 5-phosphate isomerase A [Thermomicrobium roseum DSM 5159]
gi|254808727|sp|B9KYD3|RPIA_THERP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|221155818|gb|ACM04945.1| ribose 5-phosphate isomerase A [Thermomicrobium roseum DSM 5159]
Length = 237
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 8/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K AAR A V DGM +G+G+GSTA+ + L +++ +G R+ + +S+ T
Sbjct: 1 MGTERAKERAARFAASLVEDGMIVGLGSGSTAELAVRALGERLHDGLRLIGVATSQRTAA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGALLREKIIAHAASRFIVIG 119
+ I L P+ V +DL+IDG DE++ R L+KG GGAL+REK++A A R ++I
Sbjct: 61 LARRVGIELRDPDSVDRIDLAIDGADEVEERSLGLLKGRGGALVREKLVARMARRLVIII 120
Query: 120 DESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK V R LP+E+ FG G LR R G F SD GN
Sbjct: 121 DDSKLVAALGARFPLPVEVVPFGWRWCARW----LEDLGGRPTLRCRPTG-HPFRSDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D FG I DP + + +PGVI+HGLF++M D I+G+ G +L++
Sbjct: 176 LILDVAFGAIADPAWLDRTIKMLPGVIDHGLFLDMADLVIVGSETG-IRLLER 227
>gi|238921219|ref|YP_002934734.1| ribose 5-phosphate isomerase A, [Edwardsiella ictaluri 93-146]
gi|6226031|sp|O52398|RPIA_EDWI9 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|2708657|gb|AAB92568.1| ribose-5-phosphate isomerase [Edwardsiella ictaluri 93-146]
gi|238870788|gb|ACR70499.1| ribose 5-phosphate isomerase A, putative [Edwardsiella ictaluri
93-146]
Length = 219
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALKYVRPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSDASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V S+D+ +DG DEI+ +++IKG G AL REKI+A A +F+ I D
Sbjct: 59 RLKSLGIPVFDLNEVDSLDIYVDGADEINGAMQMIKGGGAALTREKIVAAVAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ G R ++D GN I
Sbjct: 119 ASKQVDILGSFPLPVEVIPMARAYVARE----LVKLGGQPVYRQG------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + + I GV+ GLF N D A++G +DG +
Sbjct: 169 LDVHNLQIMEPCKLENAINAIAGVVTVGLFANRGADVALVGCADGVKTL 217
>gi|114331805|ref|YP_748027.1| ribose-5-phosphate isomerase A [Nitrosomonas eutropha C91]
gi|114308819|gb|ABI60062.1| ribose-5-phosphate isomerase [Nitrosomonas eutropha C91]
Length = 241
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K+ A+ A+QYV G +G+GTGST F+ LA KI + + SS T
Sbjct: 23 MTQDEQKQAVAQAALQYVQVGEIIGIGTGSTTNLFIDELA-KIKHKIE-GAVASSEATAA 80
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + S V+ + + IDG DEI + +IKG GGAL REKIIA A +FI I D
Sbjct: 81 RLKQHGIEVLSLNSVADLPVYIDGADEITRNMHMIKGGGGALTREKIIAAVARKFICIAD 140
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG+ LP+E+ + + G R F +D GN I
Sbjct: 141 QSKLVKVLGKFPLPVEVIPMARSYVARE----IALLGGQPAWRQD------FTTDNGNVI 190
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + L I GV+ +GLF D ++GT G +
Sbjct: 191 LDIHNLNIMNPVELESTLNQITGVVTNGLFARRGADVLLMGTDQGVETI 239
>gi|84516432|ref|ZP_01003791.1| ribose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
gi|84509468|gb|EAQ05926.1| ribose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
Length = 262
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
K AA++A YV GM +G+GTGSTA + L + + + G +++ +P+S T
Sbjct: 9 DTAKFVAAKQATHYVQSGMKVGLGTGSTAAWLVQCLGEMVRDHGLQIKGVPTSNRTAELA 68
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + + +DL+IDG DE D+ L LIKG GGA LREKI+A A+ R IVI D S
Sbjct: 69 RAAGIEIITLDQAKWLDLTIDGTDEYDANLNLIKGGGGAHLREKIVATASDRMIVIADAS 128
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVAS-CFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LP+E+ FG+ T ++E+ L ++ R G +V+D GN+I+
Sbjct: 129 KTVATLGAFPLPVEVLPFGMQITRGLIEELLVGVDVLGRDVIQRMQGDAPYVTDEGNFIL 188
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +P+ ++ L IPGV+E+GLFI++ D I+G G+ +
Sbjct: 189 DLHLKSIGNPRQLAMMLNQIPGVVENGLFIDICDVVIVGHGTGKVEIRD 237
>gi|56750948|ref|YP_171649.1| ribose-5-phosphate isomerase A [Synechococcus elongatus PCC 6301]
gi|81299395|ref|YP_399603.1| ribose-5-phosphate isomerase A [Synechococcus elongatus PCC 7942]
gi|56685907|dbj|BAD79129.1| ribose 5-phosphate isomerase [Synechococcus elongatus PCC 6301]
gi|81168276|gb|ABB56616.1| ribose-5-phosphate isomerase [Synechococcus elongatus PCC 7942]
Length = 241
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRN 57
MD MK A+ A V GM +G+G+GSTA + L D++ NG +Q +P+S
Sbjct: 10 MDPVTHMKHEVAKAAASRVQSGMVVGLGSGSTAALMIQYLGDRVRNGELTNIQAVPTSFQ 69
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + IPL + +V +D++IDG DE+D + LIKG G REK++ A +FIV
Sbjct: 70 SSVLANEYGIPLTTLNEVDRIDIAIDGADEVDPQRNLIKGGGACHTREKLVDARAEQFIV 129
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D SK V+ +LP+E+ + AL++ G ELR+ +G V+D
Sbjct: 130 VVDSSKLVEALGTTFLLPVEVLPEAYIQVGKALEK----LGGKPELRMAVKKAGPVVTDQ 185
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG-ECLVLQ 230
GN ++D F I P + + NIPGV+E+GLF+ + D ++G DG V +
Sbjct: 186 GNLVLDVKFDRIDQPAELEKAINNIPGVLENGLFVGLTDLVLVGEVDGDRVSVRE 240
>gi|294786574|ref|ZP_06751828.1| ribose 5-phosphate isomerase A [Parascardovia denticolens F0305]
gi|294485407|gb|EFG33041.1| ribose 5-phosphate isomerase A [Parascardovia denticolens F0305]
Length = 246
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A +A Q + DGMT G+GTGST + + L ++ G + + +SR
Sbjct: 15 MDKATQDALKKAAGVQAAQLIQDGMTAGLGTGSTVRFLVDELGRRVQEEGLKFTGVTTSR 74
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + + +DV +D++IDG DE+D IKG G ALL EKI+A + + I
Sbjct: 75 RTQEQAEGYGIKIVAVDDVDQIDITIDGADEVDKNFNGIKGGGAALLWEKIVATNSKKII 134
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + ++ G LRL G ++D
Sbjct: 135 WIVDESKVVDTIGKFPLPVEVIPFGAGHVVKRFEKR----GYKPVLRLDAEGKE-VLTDE 189
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L GV+EHGLF+NMVD I+G +G
Sbjct: 190 KNFVVDLHLDRIEHPQELAQDLITTVGVVEHGLFLNMVDTVIVGDPNG 237
>gi|145298632|ref|YP_001141473.1| ribose-5-phosphate isomerase A [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166200030|sp|A4SLF3|RPIA_AERS4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|142851404|gb|ABO89725.1| Ribose 5-phosphate isomerase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 217
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YVV G +G+GTGST F+ LA + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVVPGTIVGVGTGSTVNHFIDALA-TMKDQINGAVSSSIASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I ++ D+ ++ + +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 L-KEFGINVYDLNDIDALSVYVDGADEINASRDMIKGGGAALTREKIVAAVADKFICIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ +++ G N E R V+D GN I
Sbjct: 119 NTKTVDVLGQFPLPVEVIPMAREYVAREIRK----LGGNPEWREG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + +L I GV+ +GLF + D +IGT DG
Sbjct: 169 LDVKGMAIKDAKALEVQLNGIVGVVTNGLFAHRGADVVLIGTPDGVIT 216
>gi|167622810|ref|YP_001673104.1| ribose-5-phosphate isomerase A [Shewanella halifaxensis HAW-EB4]
gi|167352832|gb|ABZ75445.1| ribose 5-phosphate isomerase [Shewanella halifaxensis HAW-EB4]
Length = 220
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV + +G+GTGST F+ LA + + SS +
Sbjct: 2 MTQDEMKKAAGWAALQYVEENSIVGVGTGSTVNHFIDALATMKFD--IEGAVSSSEASTE 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ V + + +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 60 KMKALGIPVFDLNSVDELSVYVDGADEINGHMDMIKGGGAALTREKIVAAVAEKFICIVD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LPIE+ + + + G + R V+D GN I
Sbjct: 120 NTKQVDILGDFPLPIEVIPMARSYVARQIVK----LGGDPVYREG------CVTDNGNII 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D + I +P+ + ++ I GV+ +GLF D ++GT DG +
Sbjct: 170 LDVYNMKIMNPKALEEQINGIVGVVTNGLFAMRGADVLLVGTPDGVKTI 218
>gi|81429297|ref|YP_396298.1| ribose-5-phosphate isomerase A [Lactobacillus sakei subsp. sakei
23K]
gi|78610940|emb|CAI55992.1| Ribose 5-phosphate epimerase (Ribose 5-phosphate isomerase)
[Lactobacillus sakei subsp. sakei 23K]
Length = 227
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 6/232 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD MK+ AA R++ YV D M LG+GTGST + LA ++ + + +S T
Sbjct: 1 MDKNAMKKMAAERSVDYVEDNMILGLGTGSTVVYMVEALAKRVKAENLHLTCVCTSIRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+ + +V +DL+IDG DE+D + IKG G A L EK++A ++R I I
Sbjct: 61 EQATSLGIPVKALNEVDHIDLTIDGADEVDDNFQGIKGGGAAHLFEKLVATTSTRNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE K VD +GR LP+E+ FG + + + GLN E R +G ++D N
Sbjct: 121 DEEKVVDTIGRFPLPVEVIPFGSQQVFNKFVKE----GLNPEFRTTEDG-QRVLTDSKNE 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++D I P +++ L GV+EHGLF+++V+ ++G+ +G ++ +
Sbjct: 176 VIDLHLEKITHPHLLATWLSEQVGVVEHGLFLDLVNEVVVGSPEGVKILKAR 227
>gi|237808778|ref|YP_002893218.1| ribose 5-phosphate isomerase [Tolumonas auensis DSM 9187]
gi|259494156|sp|C4L7L6|RPIA_TOLAT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|237501039|gb|ACQ93632.1| ribose 5-phosphate isomerase [Tolumonas auensis DSM 9187]
Length = 219
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ + A+ YV +G+GTGST F+ LA I + + V S +T
Sbjct: 1 MTQDEMKKAVGQAALAYVQPNTIIGVGTGSTVNCFIDALA-SIKDQIKAAVSSSEASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV+ D+ +DG DEI+ + +IKG G AL REKI+A A RFI I D
Sbjct: 60 LQAL-GITVVDLNDVTEFDIYVDGADEINPHMEMIKGGGAALTREKIVAAVAKRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+V+ +G+ LP+E+ L++ G N R ++D I
Sbjct: 119 ATKQVEVMGKFPLPVEVIPLAREYVARELRK----LGGNPVYREG------VITDNQCQI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I + + + + IPGV+ GLF D A+IG+ DG + +
Sbjct: 169 LDVHGLQITNAKALELVINQIPGVVTVGLFAQRGADVALIGSPDGVTTITK 219
>gi|319405821|emb|CBI79453.1| Ribose 5-phosphate isomerase [Bartonella sp. AR 15-3]
Length = 234
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 141/215 (65%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+ V + M LG+GTGST EF+ LL ++IA+G R+ + +S +E C+ + + + ++V
Sbjct: 16 ESVQNNMRLGIGTGSTVNEFIRLLGERIADGLRITAVATSYYSEQLCRQFGVSITTLDEV 75
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
S +DL IDG DEID ++ LIKG GGALL EKI+A + ++I DE+K V LG +PI
Sbjct: 76 SELDLCIDGADEIDPKMTLIKGKGGALLHEKIVASVSDEMLIIADETKMVKTLGACGVPI 135
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E++ FG+N T A+++V + G + E+RLR NG F +DGG++I DAF G I +P+++S
Sbjct: 136 EVNPFGMNATCKAIEKVVNDLGHSGEIRLRMNGDIPFETDGGHFIFDAFLGSILNPKVLS 195
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
L +PGV+EHGLF+ AII +D VL+
Sbjct: 196 DALLRVPGVVEHGLFLGFASRAIIAMADSTIKVLE 230
>gi|227513735|ref|ZP_03943784.1| ribose-5-phosphate isomerase A [Lactobacillus buchneri ATCC 11577]
gi|227522448|ref|ZP_03952497.1| ribose-5-phosphate isomerase A [Lactobacillus hilgardii ATCC 8290]
gi|227083054|gb|EEI18366.1| ribose-5-phosphate isomerase A [Lactobacillus buchneri ATCC 11577]
gi|227090400|gb|EEI25712.1| ribose-5-phosphate isomerase A [Lactobacillus hilgardii ATCC 8290]
Length = 227
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 126/233 (54%), Gaps = 8/233 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M ++K+ + A++++ DGM +G+GTGST K + L ++A + +P+S+ T
Sbjct: 1 MTKQDELKQLVGQEAVKFIEDGMIVGLGTGSTVKFMVDALGKRVADEQLSIVGVPTSQRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IP ++V +DL+IDG D+ID + IKG G A L EKI+A +++ + I
Sbjct: 61 KEQAAGLGIPTKGLDEVDHIDLTIDGADQIDKNFQGIKGGGAAHLWEKIVAINSTKNMWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD LG LP+E+ +G + L++ R + +D N
Sbjct: 121 VDKSKMVDQLGSFPLPLEVIPYGSQQLFKRLEKQGF------NPVFRMKNNNYVTTDSNN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
Y++D I +P+ ++ L + G++EHGLF+N+V+ I+G DG ++ +
Sbjct: 175 YLIDLHLHKIDNPKELALTLDQMTGIVEHGLFLNIVNTVIVGEDDGPKVLQAR 227
>gi|254294211|ref|YP_003060234.1| ribose 5-phosphate isomerase [Hirschia baltica ATCC 49814]
gi|254042742|gb|ACT59537.1| ribose 5-phosphate isomerase [Hirschia baltica ATCC 49814]
Length = 233
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 137/230 (59%), Gaps = 3/230 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M KRNAA A++ V DGMTLG+GTGSTA F+ L K+ G V + +S TE
Sbjct: 1 MS-DIAKRNAAIEALKLVEDGMTLGLGTGSTAAFFVEELGKKVQLGLDVICVSTSEVTEA 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +IP+ + ++ L+IDG DE D LRLIKG G ALLREKIIA ++ +VI D
Sbjct: 60 QARSLNIPMADLDTAPTIHLTIDGADEFDPELRLIKGGGAALLREKIIADSSDMMVVITD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEE-LRLR-RNGSGLFVSDGGN 178
SK+V LG LP+E++ FG+ T + ++E G+ + +R G G ++DGG+
Sbjct: 120 ASKQVAQLGAFPLPVEVNPFGMALTKARIEETLEILGMYGIHVNVRLNEGGGPLLTDGGH 179
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+I+D IPDP ++ L IPGV+EHGLF+++ D IIGT G +
Sbjct: 180 HILDLHCKAIPDPDMLGAVLDQIPGVVEHGLFLDIADAVIIGTETGAETI 229
>gi|288560214|ref|YP_003423700.1| ribose 5-phosphate isomerase A RpiA [Methanobrevibacter ruminantium
M1]
gi|288542924|gb|ADC46808.1| ribose 5-phosphate isomerase A RpiA [Methanobrevibacter ruminantium
M1]
Length = 222
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 123/227 (54%), Gaps = 8/227 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M MK++ A + V DG LG+GTGST F+ + ++ G V IP+S +
Sbjct: 1 MSQ--MKKDCGYAAAELVKDGQVLGLGTGSTTLYFIEKVGMRVRDEGIEVMGIPTSFQSS 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ +IP+ S ++ +DL++DG DEID LIKG G A EKI+ ++A ++I
Sbjct: 59 LLARKWNIPITSLDEH-EIDLAVDGADEIDPDFNLIKGGGAAHTIEKIVDYSAKELVIIA 117
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V+ LG LPIEI +N A G +R+ + G ++D GN+
Sbjct: 118 DDSKLVNVLGAFPLPIEIIPVSLNPVTKA----LEDMGGEVNIRMGQAKDGPVITDNGNF 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
I+D FG I +P + EL +PGV+E+GLF MVD IIG+ DG
Sbjct: 174 ILDVSFGEIDNPISMEKELNTLPGVVENGLFTEMVDKVIIGSKDGVK 220
>gi|229046490|ref|ZP_04192145.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH676]
gi|228724852|gb|EEL76154.1| Ribose-5-phosphate isomerase A [Bacillus cereus AH676]
Length = 220
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 90/221 (40%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A A +V DGM +G+GTGST + L +++ G Q +P+S+ TE
Sbjct: 1 MNLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGLSFQAVPTSKETEALAH 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S DV S+DL+IDG DEIDS L+LIKG GGALLREKI+A ++ I+I DESK
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIADESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LPIEI F +T + ++ + + LR + +++D N I+D
Sbjct: 121 LVTHLGTFPLPIEIIPFSWKQTENKIQSLGC------QTTLRLKNNETYITDNNNMIIDC 174
Query: 184 FFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
F I +P + +L I GV+E GLFI+M IIG +
Sbjct: 175 IFPNHISNPAHLHTQLKMITGVVETGLFISMTSKVIIGAKN 215
>gi|251788159|ref|YP_003002880.1| ribose 5-phosphate isomerase [Dickeya zeae Ech1591]
gi|247536780|gb|ACT05401.1| ribose 5-phosphate isomerase [Dickeya zeae Ech1591]
Length = 220
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVRPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV ++D+ +DG DEI+ +++IKG G AL REKIIA A +F+ I D
Sbjct: 60 L-KSLGIPVFDCNDVDALDVYVDGADEINPHMQMIKGGGAALTREKIIAAIARQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LGR LP+E+ G R V+D GN I
Sbjct: 119 ASKQVDVLGRFPLPVEVIPMARAYVARE----LVKLGGQPVYRDG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + D + + + GV+ GLF N D A++GT+DG +V K
Sbjct: 169 LDVHNMDLSDAVAMESRINGLAGVVTVGLFANRGADVALVGTADGVKIVRLK 220
>gi|293394576|ref|ZP_06638870.1| ribose 5-phosphate isomerase [Serratia odorifera DSM 4582]
gi|291422885|gb|EFE96120.1| ribose 5-phosphate isomerase [Serratia odorifera DSM 4582]
Length = 218
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV +G+GTGSTA F+ L I + + V S +T
Sbjct: 1 MTQDELKKAVGWAALEYVKPDTIVGVGTGSTAAHFIDALG-SIKHQIKGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V +D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KSLGIPVFDSNEVDVLDIYVDGADEINGHMQMIKGGGAALTREKIIAAIARQFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I D + ++ I GV+ GLF N D A+IGTSDG +V
Sbjct: 169 LDVHNLQIVDAIALENKINGIAGVVTVGLFANRGADIALIGTSDGVKVV 217
>gi|67461293|sp|Q5N3J1|RPIA_SYNP6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
Length = 232
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRN 57
MD MK A+ A V GM +G+G+GSTA + L D++ NG +Q +P+S
Sbjct: 1 MDPVTHMKHEVAKAAASRVQSGMVVGLGSGSTAALMIQYLGDRVRNGELTNIQAVPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + IPL + +V +D++IDG DE+D + LIKG G REK++ A +FIV
Sbjct: 61 SSVLANEYGIPLTTLNEVDRIDIAIDGADEVDPQRNLIKGGGACHTREKLVDARAEQFIV 120
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D SK V+ +LP+E+ + AL++ G ELR+ +G V+D
Sbjct: 121 VVDSSKLVEALGTTFLLPVEVLPEAYIQVGKALEK----LGGKPELRMAVKKAGPVVTDQ 176
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG-ECLVLQ 230
GN ++D F I P + + NIPGV+E+GLF+ + D ++G DG V +
Sbjct: 177 GNLVLDVKFDRIDQPAELEKAINNIPGVLENGLFVGLTDLVLVGEVDGDRVSVRE 231
>gi|194367055|ref|YP_002029665.1| ribose-5-phosphate isomerase A [Stenotrophomonas maltophilia
R551-3]
gi|238693430|sp|B4SI18|RPIA_STRM5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|194349859|gb|ACF52982.1| ribose 5-phosphate isomerase [Stenotrophomonas maltophilia R551-3]
Length = 215
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV DGM +G+GTGST F+ LA +I + + V S ++T K
Sbjct: 3 EAKRLAAEKAIEYVEDGMIVGVGTGSTVAYFIDALA-RIQHRIKGAVSSSEQSTARL-KQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D+ LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVIELNHSGNLSLYVDGADECDANKCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + ++++ G R V+D GN I+D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLIARQIRDMT---GGQPTWREG------VVTDNGNQILDIH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTS 222
I DP+ + EL +PGV+ GLF D I+G
Sbjct: 172 NLQITDPEKLERELNQLPGVVCVGLFARRRADVVIVGGE 210
>gi|22537341|ref|NP_688192.1| ribose-5-phosphate isomerase A [Streptococcus agalactiae 2603V/R]
gi|77412235|ref|ZP_00788553.1| ribose 5-phosphate isomerase [Streptococcus agalactiae CJB111]
gi|30173280|sp|Q8DZC6|RPIA_STRA5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|22534212|gb|AAN00065.1|AE014245_23 ribose 5-phosphate isomerase [Streptococcus agalactiae 2603V/R]
gi|77161704|gb|EAO72697.1| ribose 5-phosphate isomerase [Streptococcus agalactiae CJB111]
gi|319745241|gb|EFV97560.1| ribose 5-phosphate isomerase [Streptococcus agalactiae ATCC 13813]
Length = 223
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 126/229 (55%), Gaps = 8/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +YV +GM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQVVGVTTSNRTTEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +D+++DG DE+D IKG GGALL EKI+A +I + DES
Sbjct: 62 RGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ ++G + K C R F++D GNYI+D
Sbjct: 122 KLVETLGAFKLPVEVVRYGSERLFRVFKSKGYC------PSFRETEGDRFITDMGNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP+ ++ EL + GV+EHGLF MV+ I+ +G +L+K
Sbjct: 176 LDLKKIEDPKQLANELDHTVGVVEHGLFNGMVNKVIVAGKNG-LDILEK 223
>gi|76787126|ref|YP_329883.1| ribose-5-phosphate isomerase A [Streptococcus agalactiae A909]
gi|77405917|ref|ZP_00782998.1| ribose 5-phosphate isomerase [Streptococcus agalactiae H36B]
gi|123601697|sp|Q3K0S0|RPIA_STRA1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|76562183|gb|ABA44767.1| ribose 5-phosphate isomerase A [Streptococcus agalactiae A909]
gi|77175491|gb|EAO78279.1| ribose 5-phosphate isomerase [Streptococcus agalactiae H36B]
Length = 223
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 126/229 (55%), Gaps = 8/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +YV +GM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQVVGVTTSNRTTEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +D+++DG DE+D IKG GGALL EKI+A +I + DES
Sbjct: 62 RGLAIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ ++G + K C R F++D GNYI+D
Sbjct: 122 KLVETLGAFKLPVEVVRYGSERLFRVFKSKGYC------PSFRETEGDRFITDMGNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP+ ++ EL + GV+EHGLF MV+ I+ +G +L+K
Sbjct: 176 LDLKKIEDPKQLANELDHTVGVVEHGLFNGMVNKVIVAGKNG-LDILEK 223
>gi|269926562|ref|YP_003323185.1| ribose 5-phosphate isomerase [Thermobaculum terrenum ATCC BAA-798]
gi|269790222|gb|ACZ42363.1| ribose 5-phosphate isomerase [Thermobaculum terrenum ATCC BAA-798]
Length = 229
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 129/229 (56%), Gaps = 8/229 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M+ L +KR A RA Q V DG +G+G+GSTA+ F+ L +++ G RV +P+S T
Sbjct: 1 MNQLDLKRMVAYRAAQLVPDGALIGLGSGSTAELFVQFLGERVRNEGLRVVGVPTSERTV 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K + L + E+ +D++ DG DE+D L L+KG GGAL REKI+A A+ F+V+
Sbjct: 61 AAAKAAGVELTTLEEHPELDMAFDGADEVDPDLNLVKGLGGALAREKIVAKASRVFVVLV 120
Query: 120 DESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK VD + +P+E+ QFG +T GL LR +V+D GN
Sbjct: 121 DESKLVDILGSKSPVPVEVLQFGWTRTSRE----LESMGLQPV--LRTRDGLPYVTDNGN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
Y++D G I +P + +L + GV+E GLFI++ ++GT DG
Sbjct: 175 YVLDLHVGPISNPSDLDLKLHLVTGVVETGLFIDIASLVMVGTQDGVIE 223
>gi|77407828|ref|ZP_00784581.1| ribose 5-phosphate isomerase [Streptococcus agalactiae COH1]
gi|77173575|gb|EAO76691.1| ribose 5-phosphate isomerase [Streptococcus agalactiae COH1]
Length = 223
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 8/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +YV +GM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQVIGVTTSNRTTEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +D+++DG DE+D IKG GGALL EKI+A +I + DES
Sbjct: 62 RGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ ++G + K C R F++D GNYI+D
Sbjct: 122 KLVETLGAFKLPVEVVRYGSERLFRVFKSKGYC------PSFRETEGDRFITDMGNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP+ ++ EL + GV+EHGLF MV+ I+ + +G +L+K
Sbjct: 176 LDLKKIEDPKQLANELDHTVGVVEHGLFNGMVNKVIVASKNG-LDILEK 223
>gi|55925229|ref|NP_001007290.1| ribose-5-phosphate isomerase [Danio rerio]
gi|55250104|gb|AAH85542.1| Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase)
[Danio rerio]
Length = 275
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 8/233 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
A + K+ AA A+ ++ + +G+G+GST + LA+K+ + +P+S
Sbjct: 42 AEEAKKLAAYAAVDNHIQNNQVIGVGSGSTIVYAVDRLAEKVRQEKLNIVCVPTSFQARQ 101
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H +PL + +D++IDG DE+D+ L LIKG GG L +EKI+A A FIVI D
Sbjct: 102 LILQHGLPLSDLDRHPELDVAIDGADEVDTALTLIKGGGGCLTQEKIVAGCAKHFIVIAD 161
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K + +P+E+ A+ CFG LR+ + +G V+D
Sbjct: 162 YRKDSKALGQQWKKGVPVEVIPMAYVPVSRAIAR---CFGGEAVLRMAVSKAGPVVTDNS 218
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N+I+D F + + ++ + IPGV+E GLF+ M + G DG
Sbjct: 219 NFILDWKFEHAQNWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTRD 271
>gi|90580302|ref|ZP_01236109.1| ribose-5-phosphate isomerase A [Vibrio angustum S14]
gi|90438604|gb|EAS63788.1| ribose-5-phosphate isomerase A [Vibrio angustum S14]
Length = 219
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ LA + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVQKGTIVGVGTGSTVNHFIDALATR-KEEIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
++ I + +V+S+D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 LEQL-GITVFDANEVASLDIYVDGADEINADYDMIKGGGAALTREKIVAAIAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K+VD LG+ LP+E+ G + G + R V+D GN I
Sbjct: 119 DTKQVDVLGQFPLPVEVIPMGRSFIGRE----LVKLGGDPAYREG------VVTDNGNMI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I DP+ + ++ +PGV+ GLF + D ++G+ DG
Sbjct: 169 LDVYNMKITDPKAMEDKINALPGVVTVGLFAHRGADVLLVGSPDGVKK 216
>gi|253988632|ref|YP_003039988.1| ribose-5-phosphate isomerase A [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638044|emb|CAR66672.1| ribose-5-phosphate isomerase a (ec 5.3.1.6) (phosphoriboisomerase a
(pri) [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253780082|emb|CAQ83243.1| ribose-5-phosphate isomerase A [Photorhabdus asymbiotica]
Length = 219
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+++V G +G+GTGSTA F+ L I + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALEFVTPGTIVGVGTGSTASHFIDALG-SIKDQVKGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V S+D+ +DG DEI+S +++IKG G AL REKIIA A +F+ I D
Sbjct: 60 L-KSLGIPILDCNEVDSLDIYVDGADEINSNMQMIKGGGAALTREKIIAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LGR LP+E+ + G + R V+D GN I
Sbjct: 119 ASKQVDVLGRFPLPVEVIPMARSYVARE----LVKLGGVPKYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + ++ I GV+ GLF N D ++G DG + Q
Sbjct: 169 LDVHNLSILDPIELENKINGIAGVVTVGLFANRGADVVLMGALDGVKTITQ 219
>gi|212633732|ref|YP_002310257.1| ribose-5-phosphate isomerase A [Shewanella piezotolerans WP3]
gi|226734916|sp|B8CJW7|RPIA_SHEPW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|212555216|gb|ACJ27670.1| Ribose 5-phosphate isomerase [Shewanella piezotolerans WP3]
Length = 218
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV +G+GTGST F+ LA A+ + SS +
Sbjct: 1 MTQDEMKKAAGWAALQYVEKDSIVGVGTGSTVNHFIDALATMKAD--IDGAVSSSEASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ V + + +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 KMKSLGIPVYDLNSVDDLSVYVDGADEINGHMDMIKGGGAALTREKIVAAVADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVDILGEFPLPVEVIPMARSYVARQ----LVKLGGDPVYREG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D + I P+ + ++ I GV+ +GLF D ++GT +G V
Sbjct: 169 LDVYNMKIMTPKELEEQINAIVGVVTNGLFAMRGADVLLVGTPEGVKTV 217
>gi|191639658|ref|YP_001988824.1| ribose-5-phosphate isomerase A [Lactobacillus casei BL23]
gi|190713960|emb|CAQ67966.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Lactobacillus casei BL23]
gi|327383771|gb|AEA55247.1| Ribose 5-phosphate isomerase [Lactobacillus casei LC2W]
gi|327386964|gb|AEA58438.1| Ribose 5-phosphate isomerase [Lactobacillus casei BD-II]
Length = 229
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 132/229 (57%), Gaps = 6/229 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M+ +K+ AA++A + V DGMT+G+GTGST + +A ++ ++ + +S T
Sbjct: 1 MNQNDLKQQAAQKAAELVKDGMTIGLGTGSTVYYLVKAIAQRVETEHVQLTGVATSIRTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ ++V +DL+IDG DE+D + IKG G A L EK++A +++ I I
Sbjct: 61 EQAESLGIPMKDLDEVDHIDLTIDGADEVDKHFQGIKGGGAAHLIEKVVAINSAQNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG+ LP+E+ FG L + + GLN E RL +G ++D N+
Sbjct: 121 DESKLVDTLGKFPLPLEVIPFGSG----KLVQRLANEGLNPEYRLTNDGEK-VLTDSDNF 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
IVD G I P +++ L G++EHGLF+++V ++GT +G ++
Sbjct: 176 IVDLHLGRIEHPHLLASWLNEQVGLVEHGLFLDVVKKVVVGTENGPKIL 224
>gi|258511848|ref|YP_003185282.1| ribose 5-phosphate isomerase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478574|gb|ACV58893.1| ribose 5-phosphate isomerase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 224
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
++ KR A A + + GM +G+GTGSTA ++ + ++ G + IP+SR TE +
Sbjct: 1 MEKKRMAGEEAAKRIQPGMKVGLGTGSTAYYTIVEVGRRVKEGLEIVAIPTSRETERLAR 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL +DL+IDG D + L+LIKG GGALLREK++A + I++ D+SK
Sbjct: 61 ELGIPLTDFRSCPRLDLTIDGADAVTPDLQLIKGGGGALLREKLVASISDELIIVVDDSK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
D L +P+E+ F T +++ L LR FV+D NYI+D
Sbjct: 121 LYDSLSGLAIPVEVVPFAWETTARRIEQ------LGGRWTLRERNGETFVTDNHNYILDT 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
F + DP ++ L GV+E GLFI+M + IGT +G
Sbjct: 175 VFDEVADPADLARRLKLTTGVVESGLFIDMANEVAIGTDEGVV 217
>gi|227529480|ref|ZP_03959529.1| ribose-5-phosphate isomerase [Lactobacillus vaginalis ATCC 49540]
gi|227350565|gb|EEJ40856.1| ribose-5-phosphate isomerase [Lactobacillus vaginalis ATCC 49540]
Length = 230
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 6/226 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
M+ ++K+ R A++Y+ GM +G+GTG+T + L + + NG V + +S T
Sbjct: 1 MNQDELKQQVGREAVKYIHPGMVVGLGTGTTVHCLVEALGEHVKNGDLSDVVCVTTSNRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ I + +DV +DL+IDG DEI + IKG GGALL EKI+++ + + I
Sbjct: 61 TRQAQSLGIKVEEIDDVDHIDLTIDGADEISDDFQGIKGGGGALLWEKIVSNYSDHVMWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V LG LP+E+ +G + L G N R+ + S F + N
Sbjct: 121 VDESKLVHHLGAFPLPVEVTPYGSQHLFTKLARR----GYNPTWRMLPDNSDKFRTHQRN 176
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+I+D I DP + EL + G+IE GLF+N V+ ++GT DG
Sbjct: 177 FIIDLHLEDINDPFALHEELIGMVGLIEDGLFLNQVNDVLVGTQDG 222
>gi|154247149|ref|YP_001418107.1| ribose 5-phosphate isomerase [Xanthobacter autotrophicus Py2]
gi|154161234|gb|ABS68450.1| ribose 5-phosphate isomerase [Xanthobacter autotrophicus Py2]
Length = 253
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 97/229 (42%), Positives = 137/229 (59%), Gaps = 2/229 (0%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
A KR AA A+ YV DGM LG+GTGSTA+ F+ LLA+K+ G + +P+S T +
Sbjct: 22 AEDPKRRAAAHALTYVTDGMRLGLGTGSTARHFVELLAEKVHAGLNILGVPTSEQTLSQA 81
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+P+ + ++ +DL IDG DE+ L LIKG GGALLREKI+A AA +VI D S
Sbjct: 82 VSLGVPIATLDEAGPLDLCIDGADEVGPGLALIKGGGGALLREKIVASAAREMVVIADSS 141
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIV 181
K+V LGR LPIE+ FGV + + G ++LRR+G G FV+D G+ I+
Sbjct: 142 KKVAMLGRFPLPIEVVDFGVASIERHVADAVRKAGCEGPVKLRRDGDGHPFVTDQGHLIL 201
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D G IPDP ++ + + GV+EHGLF+ + ++ +DG VL+
Sbjct: 202 DVHLGRIPDPAALARAVEEVAGVVEHGLFLGLARRVVLAGADG-ITVLE 249
>gi|254172861|ref|ZP_04879535.1| ribose 5-phosphate isomerase A [Thermococcus sp. AM4]
gi|214033017|gb|EEB73845.1| ribose 5-phosphate isomerase A [Thermococcus sp. AM4]
Length = 226
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ-VIPSSRNTENFC 62
++K+ AR A+ +V D M +G+GTGST F+ L + I IP+S +
Sbjct: 2 EELKKAVAREALSFVDDDMVIGLGTGSTTAYFIKFLGELIREEELEIYGIPTSHQSRLLA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
H IPL S ++ ++D+++DG DE+D L LIKG G AL EKII + A F+V+ DES
Sbjct: 62 IEHGIPLLSLDEADAIDIAVDGADEVDPALNLIKGRGAALTMEKIIEYRAGTFVVLVDES 121
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V R +PIE+ A+ E F ELR+ G ++D GN+I+
Sbjct: 122 KLVKRLGERMPVPIEVIPAAW----RAIAEELEVFNARAELRMAVKKDGPVITDNGNFIL 177
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
DA F I DP + EL IPGV+E+G+F ++ D ++GT +G +
Sbjct: 178 DARFERIDDPLDMEIELNTIPGVVENGIFADIADVVLVGTREGVKKL 224
>gi|37527474|ref|NP_930818.1| ribose-5-phosphate isomerase A [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|41017637|sp|Q7N189|RPIA_PHOLL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|36786909|emb|CAE15979.1| ribose 5-phosphate isomerase A (phosphoriboisomerase A)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 219
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+++V G +G+GTGSTA F+ L I + V S +TE
Sbjct: 1 MTQDELKKAVGWAALEFVTPGTVVGVGTGSTASHFIDALG-SIKDQIEGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V S+D+ +DG DEI+ +++IKG G AL REKIIA A +F+ I D
Sbjct: 60 L-KSLGIPVFDCNEVDSLDIYVDGADEINGNMQMIKGGGAALTREKIIAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V+ LG+ LP+E+ G + R V+D GN I
Sbjct: 119 ASKKVEVLGKFPLPVEVIPMARAYVARE----LVKLGGVPKYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + ++ I GV+ GLF N D ++GT DG + Q
Sbjct: 169 LDVHNLAILDPAELENKINRISGVVTVGLFANRGADIVLMGTLDGVETITQ 219
>gi|292487119|ref|YP_003529989.1| ribose 5-phosphate isomerase A [Erwinia amylovora CFBP1430]
gi|292900497|ref|YP_003539866.1| ribose 5-phosphate isomerase A [Erwinia amylovora ATCC 49946]
gi|291200345|emb|CBJ47473.1| ribose 5-phosphate isomerase A [Erwinia amylovora ATCC 49946]
gi|291552536|emb|CBA19581.1| ribose 5-phosphate isomerase A [Erwinia amylovora CFBP1430]
Length = 219
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVTPGTIVGVGTGSTAAHFIDALA-SIKHQIEGTVSSSELSTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ ++ + L +DG DEI+ ++++IKG G AL REKIIA A RFI I D
Sbjct: 60 L-KACGIPVFDLNEIDVLSLYVDGADEINGQMQMIKGGGAALTREKIIAAVADRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG LP+E+ + G R V+D GN I
Sbjct: 119 ESKQVDVLGHFPLPVEVIPMARSYVARE----LVKLGGLPIYRQD------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + + GV+ GLF D A+IGT+ G + +
Sbjct: 169 LDVHNLNIIDPIRLETAINALTGVVTVGLFAARGADVALIGTAKGVRTIKK 219
>gi|312171224|emb|CBX79483.1| ribose 5-phosphate isomerase A [Erwinia amylovora ATCC BAA-2158]
Length = 219
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVTPGTIVGVGTGSTAAHFIDALA-SIKHQIEGTVSSSELSTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ ++ + L +DG DEI+ ++++IKG G AL REKIIA A RFI I D
Sbjct: 60 L-KACGIPVFDLNEIDVLSLYVDGADEINGQMQMIKGGGAALTREKIIAAVADRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG LP+E+ + G R V+D GN I
Sbjct: 119 ESKQVDVLGHFPLPVEVIPMARSYVARE----LVKLGGLPIYRQD------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I DP + + + GV+ GLF D A+IGT+ G V +
Sbjct: 169 LDVHNLNIIDPIRLETAINALTGVVTVGLFAARGADVALIGTAKGVRTVKK 219
>gi|126305312|ref|XP_001379233.1| PREDICTED: similar to ribose 5-phosphate isomerase A (ribose
5-phosphate epimerase) [Monodelphis domestica]
Length = 315
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
Query: 1 MDA-LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M + KR A R A++ +V + LG+G+GST + +A+++ V IP+S
Sbjct: 79 MSKTEEAKRLAGRAAVENHVENNQVLGIGSGSTIVHAVQRIAERVKQENLNVVCIPTSFQ 138
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ +PL + +DL+IDG DE+D+ L LIKG GG L +EKI+A A RFIV
Sbjct: 139 ARQLILQNGLPLSDLDRHPELDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYAKRFIV 198
Query: 118 IGDESKRVDFLGRGML---PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K LG + PIE+ AL FG ELR+ +G V+
Sbjct: 199 IADYRKDSKNLGEHWVKGVPIEVIPMAYVPVARALAR---MFGGVAELRMAERKAGPVVT 255
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+++D F + ++ + IPGV++ GLFINM + G DG V ++
Sbjct: 256 DNGNFLLDWKFDRVHPWSEVNTAIKMIPGVVDTGLFINMAERVYFGMEDGSVSVRER 312
>gi|254166942|ref|ZP_04873796.1| ribose 5-phosphate isomerase A [Aciduliprofundum boonei T469]
gi|289596225|ref|YP_003482921.1| ribose 5-phosphate isomerase [Aciduliprofundum boonei T469]
gi|197624552|gb|EDY37113.1| ribose 5-phosphate isomerase A [Aciduliprofundum boonei T469]
gi|289534012|gb|ADD08359.1| ribose 5-phosphate isomerase [Aciduliprofundum boonei T469]
Length = 230
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 133/227 (58%), Gaps = 7/227 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
++KR A +A++Y+ DGM +G+GTGST K ++ L + + +G + IP+S TE
Sbjct: 4 KEELKRKAGEKAVKYIKDGMVVGLGTGSTVKYTILKLGELVKDGLDIIGIPTSIATEKLA 63
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
K I L S D +DL+IDG DE+D L LIKG GGALLREK+IAHA+ I++ DES
Sbjct: 64 KEMGIKLGSINDYQVIDLTIDGADEVDRNLNLIKGGGGALLREKMIAHASKYEIIVVDES 123
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K LG LPIEI +FG +T++ L + + LR +++D GNYIVD
Sbjct: 124 KVKSVLGDFPLPIEIVKFGYKRTMNVLSTLGC------KPLLRVKNGEAYITDNGNYIVD 177
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
F I +P + + IPGV+E GLF+ + + I+G D + ++
Sbjct: 178 CKFERIDEPAKLERRIDEIPGVVEVGLFVGLANKVIVGKKD-KIEIM 223
>gi|85715398|ref|ZP_01046380.1| ribose-5-phosphate isomerase A [Nitrobacter sp. Nb-311A]
gi|85697819|gb|EAQ35694.1| ribose-5-phosphate isomerase A [Nitrobacter sp. Nb-311A]
Length = 232
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 109/232 (46%), Positives = 152/232 (65%), Gaps = 1/232 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +KR AA RA++YV DGM LG+GTGSTAK F+ LL +++ G +V +P+S T
Sbjct: 1 MTLDALKRQAAARALEYVEDGMRLGLGTGSTAKHFVELLGERVRGGLKVVGVPTSEVTRA 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + +D+ +DL++DG DEID+ L LIKG GGALLREKI+A + R IVI D
Sbjct: 61 DAERCGIPLTTLDDLDRLDLTVDGADEIDADLNLIKGGGGALLREKIVAAGSERMIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL-FVSDGGNY 179
E+K V LGR LPIE+ FG+ T A+ EV + G++ EL +R+ G FV+DGG++
Sbjct: 121 ETKWVAGLGRFPLPIEVIPFGLAATRRAITEVFAKAGVSGELVIRKRSDGHAFVTDGGHW 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DA G IPD ++G L IPGV+EHGLFI + A++ + G +V ++
Sbjct: 181 IFDAHLGQIPDASYLAGLLNPIPGVVEHGLFIGLAGVAMLAGAQGIRIVERR 232
>gi|227532840|ref|ZP_03962889.1| ribose-5-phosphate isomerase A (phosphoriboisomerase A)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227189504|gb|EEI69571.1| ribose-5-phosphate isomerase A (phosphoriboisomerase A)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 229
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 131/229 (57%), Gaps = 6/229 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M+ +K+ AA++A + V DGMT+G+GTGST + +A ++ ++ + +S T
Sbjct: 1 MNQNDLKQQAAQKAAELVKDGMTIGLGTGSTVYYLVKAIAQRVETEHIQLTGVATSIRTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + ++V +DL+IDG DE+D + IKG G A L EK++A +++ I I
Sbjct: 61 EQAESLGIHMKDLDEVDHIDLTIDGADEVDKHFQGIKGGGAAHLIEKVVAINSAQNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG+ LP+E+ FG L + + GLN E RL +G ++D N+
Sbjct: 121 DESKLVDTLGKFPLPLEVIPFGSG----KLVQRLANEGLNPEYRLTNDGEK-VLTDSDNF 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
IVD G I P +++ L G++EHGLF+++V ++GT +G ++
Sbjct: 176 IVDLHLGRIEHPHLLASWLNEQVGLVEHGLFLDVVKKVVVGTENGPKIL 224
>gi|16126542|ref|NP_421106.1| ribose-5-phosphate isomerase A [Caulobacter crescentus CB15]
gi|221235324|ref|YP_002517761.1| ribose-5-phosphate isomerase A [Caulobacter crescentus NA1000]
gi|30173366|sp|Q9A5Z4|RPIA_CAUCR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808704|sp|B8GYT0|RPIA_CAUCN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|13423822|gb|AAK24274.1| ribose-5-phosphate isomerase A [Caulobacter crescentus CB15]
gi|220964497|gb|ACL95853.1| ribose 5-phosphate isomerase [Caulobacter crescentus NA1000]
Length = 227
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 94/228 (41%), Positives = 138/228 (60%), Gaps = 3/228 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A KR + A + V +GM +G+GTGSTA F+ LA + ++ +P+S T
Sbjct: 1 MSADDQKRISGEAAAELVENGMVVGLGTGSTAAWFVKALAARGLK--DIRGVPTSDATAA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + +DV +VDL++DG DEI L LIKG G ALLREK++ A++R +VI D
Sbjct: 59 LARELGIPLAALDDVKTVDLTVDGADEIGPGLSLIKGGGAALLREKLVWEASTRCVVIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+KRV LG+ LPIE+ +FG T L ++A+ F L RLR G+ V+DGGN I
Sbjct: 119 AAKRVPALGKFPLPIEVVRFGHVHTGYRLADIAAEFDLPP-PRLRTAERGMVVTDGGNLI 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
D G I DP ++ L ++ GV++HGLF+++ D A++GT +G +
Sbjct: 178 YDMASGKIEDPTALAAALKSVTGVVDHGLFLDLADEALVGTDEGVVRL 225
>gi|220679087|emb|CAX13678.1| ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase)
[Danio rerio]
Length = 275
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 8/233 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
A + K+ AA A+ ++ + +G+G+GST + LA+K+ + +P+S
Sbjct: 42 AEEAKKLAAYAAVDNHIQNNQVIGVGSGSTIVYAVDRLAEKVRQEKLNIVCVPTSFQARQ 101
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H +PL + +D++IDG DE+D+ L LIKG GG L +EKI+A A FIVI D
Sbjct: 102 LILQHGLPLSDLDRHPELDVAIDGADEVDTALTLIKGGGGCLTQEKIVAGCAKHFIVIAD 161
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K + +P+E+ A+ FG LR+ + +G V+D
Sbjct: 162 YRKDSKALGQQWKKGVPVEVIPMAYVPVSRAIARR---FGGEAVLRMAVSKAGPVVTDNS 218
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N+I+D F + + ++ + IPGV+E GLF+ M + G DG
Sbjct: 219 NFILDWKFEHAQNWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTRD 271
>gi|89074090|ref|ZP_01160589.1| ribose-5-phosphate isomerase A [Photobacterium sp. SKA34]
gi|89050026|gb|EAR55552.1| ribose-5-phosphate isomerase A [Photobacterium sp. SKA34]
Length = 219
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ LA + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVQKGTIVGVGTGSTVNHFIDALATR-KEEIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
++ I + +V+S+D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 LEQL-GITVFDANEVASLDIYVDGADEINADYDMIKGGGAALTREKIVAAIAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K+VD LG+ LP+E+ G + G + R V+D GN I
Sbjct: 119 DTKQVDVLGQFPLPVEVIPMGRSFIGRE----LVKLGGDPAYREG------VVTDNGNMI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I DP+ + ++ +PGV+ GLF + D ++G+ DG
Sbjct: 169 LDVYNMKITDPKTMEDKINALPGVVTVGLFAHRGADVLLVGSPDGVKK 216
>gi|25011305|ref|NP_735700.1| ribose-5-phosphate isomerase A [Streptococcus agalactiae NEM316]
gi|77412834|ref|ZP_00789039.1| ribose 5-phosphate isomerase [Streptococcus agalactiae 515]
gi|30173284|sp|Q8E4Y6|RPIA_STRA3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|23095729|emb|CAD46915.1| Unknown [Streptococcus agalactiae NEM316]
gi|77161130|gb|EAO72236.1| ribose 5-phosphate isomerase [Streptococcus agalactiae 515]
Length = 223
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 8/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +YV +GM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQVVGVTTSNRTTEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +D+++DG DE+D IKG GGALL EKI+A +I + DES
Sbjct: 62 RGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ ++G + K C R F++D GNYI+D
Sbjct: 122 KLVETLGAFKLPVEVVRYGSERLFRVFKSKGYC------PSFRETEGDRFITDMGNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP+ ++ EL + GV+EHGLF +MV+ I+ +G +L+K
Sbjct: 176 LDLKKIEDPKQLANELDHTVGVVEHGLFNSMVNKVIVAGKNG-LDILEK 223
>gi|315302428|ref|ZP_07873290.1| ribose 5-phosphate isomerase A [Listeria ivanovii FSL F6-596]
gi|313629199|gb|EFR97470.1| ribose 5-phosphate isomerase A [Listeria ivanovii FSL F6-596]
Length = 224
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 123/231 (53%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A +A +++ GM +G+GTGST + L + + G + + +S T
Sbjct: 2 MNQ---KKIAGEKACEWIKPGMVVGLGTGSTVYYTIEKLGEMVQAGLNITGVATSEQTAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL S DV +D++IDG DE+D + + IKG GGALLREK++A A+ I +
Sbjct: 59 QARKWKIPLKSLNDVLEIDVTIDGADEVDGKFQGIKGGGGALLREKMVAEASLLNIWVVG 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K V LG+ LP+E+ FG + L++ L +++ ++ ++ GNYI
Sbjct: 119 EDKLVPTLGKFPLPLEVIPFGWKQVKRILEKQGVQTKLR-----KQDDDEIYQTNNGNYI 173
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D +P L IPGV+E GLF+N VD I G +GE V +K
Sbjct: 174 LDVINQTFSNPIKWQERLMQIPGVVEQGLFLNYVDIVICGRENGEIEVKKK 224
>gi|269140293|ref|YP_003296994.1| ribose-5-phosphate isomerase A [Edwardsiella tarda EIB202]
gi|267985954|gb|ACY85783.1| ribose-5-phosphate isomerase A [Edwardsiella tarda EIB202]
gi|304560119|gb|ADM42783.1| Ribose 5-phosphate isomerase A [Edwardsiella tarda FL6-60]
Length = 219
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALKYVQPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSDASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V ++D+ +DG DEI+ +++IKG G AL REKI+A A +F+ I D
Sbjct: 59 KLKSLGIPVFDLNEVDALDIYVDGADEINGAMQMIKGGGAALTREKIVAAVAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ G R ++D GN I
Sbjct: 119 ASKQVDILGNFPLPVEVIPMARAYVARE----LVKLGGQPVYRQG------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + + I GV+ GLF N D A++G +DG +
Sbjct: 169 LDVHNLQIMEPCKLENAINAIAGVVTVGLFANRGADVALVGCADGVKTL 217
>gi|114562026|ref|YP_749539.1| ribose-5-phosphate isomerase A [Shewanella frigidimarina NCIMB 400]
gi|122300622|sp|Q086W4|RPIA_SHEFN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|114333319|gb|ABI70701.1| ribose-5-phosphate isomerase [Shewanella frigidimarina NCIMB 400]
Length = 219
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV +G+GTGST F+ LA + + V S +T+
Sbjct: 1 MTQDEMKKAAGWAALQYVKKDTIVGVGTGSTVNHFIDALA-TMKDDIEGAVSSSEASTKK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
++ I + V +D+ +DG DEI+ R+ +IKG G AL REKI+A A RFI I D
Sbjct: 60 LIEL-GIEVFDLNSVDLIDVYVDGADEINDRMDMIKGGGAALTREKIVAAVAKRFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+V LG LP+E+ + G + R ++D GN I
Sbjct: 119 NTKQVPILGEFPLPVEVIPMARSYVARE----LVKLGGDPVYRQG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I DP+++ ++ I GV+ +GLF N D ++GT DG +
Sbjct: 169 LDVYNMKILDPKVMETKINAIVGVVTNGLFANRGADVLLVGTPDGVNTI 217
>gi|242238012|ref|YP_002986193.1| ribose 5-phosphate isomerase [Dickeya dadantii Ech703]
gi|242130069|gb|ACS84371.1| ribose 5-phosphate isomerase [Dickeya dadantii Ech703]
Length = 220
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVRPGTVVGVGTGSTAAHFIDALG-TIKDQIKGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV ++D+ +DG DEI+S +++IKG G AL REKI+A + +F+ I D
Sbjct: 60 L-KSLGIPVFDCNDVDALDVYVDGADEINSHMQMIKGGGAALTREKIVAAISRQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V+ LG+ LP+E+ + G R ++D GN I
Sbjct: 119 ASKQVEVLGKFPLPVEVIPMARTYVTRE----LTKLGGRPVYRDG------VLTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + D + + I GV+ GLF N D A++GT+DG V K
Sbjct: 169 LDVHDFDLSDAVAMENRINGIAGVVTVGLFANRGADVALVGTADGVKTVRLK 220
>gi|315226157|ref|ZP_07867945.1| ribose 5-phosphate isomerase A [Parascardovia denticolens DSM
10105]
gi|315120289|gb|EFT83421.1| ribose 5-phosphate isomerase A [Parascardovia denticolens DSM
10105]
Length = 234
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A +A Q + DGMT G+GTGST + + L ++ G + + +SR
Sbjct: 3 MDKATQDALKKAAGVQAAQLIQDGMTAGLGTGSTVRFLVDELGRRVQEEGLKFTGVTTSR 62
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + + +DV +D++IDG DE+D IKG G ALL EKI+A + + I
Sbjct: 63 RTQEQAEGYGIKIVAVDDVDQIDITIDGADEVDKNFNGIKGGGAALLWEKIVATNSKKII 122
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + ++ G LRL G ++D
Sbjct: 123 WIVDESKVVDTIGKFPLPVEVIPFGAGHVVKRFEKR----GYKPVLRLDAEGKE-VLTDE 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L GV+EHGLF+NMVD I+G +G
Sbjct: 178 KNFVVDLHLDRIEHPQELAQDLITTVGVVEHGLFLNMVDTVIVGDPNG 225
>gi|113476144|ref|YP_722205.1| ribose-5-phosphate isomerase A [Trichodesmium erythraeum IMS101]
gi|123352234|sp|Q111U2|RPIA_TRIEI RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|110167192|gb|ABG51732.1| ribose-5-phosphate isomerase [Trichodesmium erythraeum IMS101]
Length = 237
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 126/227 (55%), Gaps = 7/227 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A + V GM +G+GTGST + L + + G ++ IP+S + K
Sbjct: 11 MKQQVGKAAAEEVKSGMIVGLGTGSTTAYMIQFLGELLQRGELKDIKGIPTSFQSTVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + ++V +D++IDG DE+D + LIKG G A REKI+ A +F+V+ D SK
Sbjct: 71 KYGVPLTTLDEVDYMDIAIDGADEVDPQKNLIKGGGAAHTREKIVDCLAEKFVVVVDSSK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ +N + A+++ G E+R+ +G V+D GN ++D
Sbjct: 131 LVDKLGSTFLLPVEVIPMAMNPVIRAIEK----LGGQPEVRMGVKKAGPIVTDQGNLVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
F I +P + L NIPGV+E+GLF+ + D ++G D ++
Sbjct: 187 VKFDSIDNPGELEKSLNNIPGVLENGLFVGVADVILVGEIDNGKPIV 233
>gi|284051342|ref|ZP_06381552.1| ribose-5-phosphate isomerase A [Arthrospira platensis str. Paraca]
gi|291568212|dbj|BAI90484.1| ribose-5-phosphate isomerase A [Arthrospira platensis NIES-39]
Length = 237
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L +++ +G ++ +P+S K
Sbjct: 11 MKQQVGKAAADRVKSGSIVGLGTGSTTAYTIQFLGERLKSGEIKDIKGVPTSFQASVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + +++ +D++IDG DE+D LIKG G A REKI+ A +FIV+ D SK
Sbjct: 71 EYGIPLTTLDEIDHIDIAIDGADEVDPNKNLIKGGGAAHTREKIVDCLADQFIVVVDGSK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ + ++A+ + G LR+ +G ++D GN ++D
Sbjct: 131 MVDRLGSTFLLPVEVIPMAMTPVMAAITK----LGGKPTLRMGVKKAGPVITDQGNMVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I +P + L NIPGV+E+GLF+ + D ++G DG+ +V +
Sbjct: 187 VKFDAIDNPAELEKTLNNIPGVLENGLFVGVADVILVGEIKDGQPIVRE 235
>gi|328544375|ref|YP_004304484.1| ribose-5-phosphate isomerase A [polymorphum gilvum SL003B-26A1]
gi|326414117|gb|ADZ71180.1| Ribose-5-phosphate isomerase A [Polymorphum gilvum SL003B-26A1]
Length = 262
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 136/228 (59%), Gaps = 1/228 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M KR AA +A++ V GM LG+GTGSTA+ F+ L ++ +G V +P+S TE
Sbjct: 33 MS-DAWKRMAAEKALEDVRPGMKLGIGTGSTAEHFIRALGARVRDGLDVVGVPTSERTET 91
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + + + S+DL++DG DEID ++ LIKG GGALLREKI+A A+ R +VI D
Sbjct: 92 LARSEGIQMTTLDHLPSLDLTVDGADEIDPQMNLIKGGGGALLREKIVAAASQRMVVIAD 151
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V LG LPIE+ FG+ T A+++V + GL+ L LR FV+D G+YI
Sbjct: 152 ASKLVPVLGGFPLPIEVVPFGLGATWRAVEKVFADLGLSGALSLRGGDDHPFVTDSGHYI 211
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+DA I P ++ L IPGV EHGLFI + A + DG V
Sbjct: 212 LDAALTEIRAPAALAAALVAIPGVAEHGLFIGLASKAYVAGPDGVATV 259
>gi|227510721|ref|ZP_03940770.1| ribose-5-phosphate isomerase A [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227189842|gb|EEI69909.1| ribose-5-phosphate isomerase A [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 227
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 125/233 (53%), Gaps = 8/233 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M ++K+ + A++++ DGM +G+GTGST K + L ++A + +P+S+ T
Sbjct: 1 MTKQDELKQLVGQEAVKFIEDGMIVGLGTGSTVKFMVDALGKRVADEQLSIVGVPTSQRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IP ++V +DL+IDG D+ID + IKG G A L EKI+A +++ + I
Sbjct: 61 KEQAAGLGIPTKGLDEVDHIDLTIDGADQIDKNFQGIKGGGAAHLWEKIVAINSTKNMWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD LG LP+E+ +G + L++ R + +D N
Sbjct: 121 VDKSKMVDQLGSFPLPLEVIPYGSQQLFKRLEKRGF------NPVFRMKNNNYVTTDSNN 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
Y++D I +P ++ L + G++EHGLF+N+V+ I+G DG ++ +
Sbjct: 175 YLIDLHLHKIDNPNKLALTLDQMTGIVEHGLFLNIVNTVIVGEDDGPKVLQAR 227
>gi|330829107|ref|YP_004392059.1| ribose-5-phosphate isomerase A [Aeromonas veronii B565]
gi|328804243|gb|AEB49442.1| Ribose-5-phosphate isomerase A [Aeromonas veronii B565]
Length = 217
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YVV G +G+GTGST F+ LA + + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVVPGTIVGVGTGSTVNHFIDALA-TMKDEIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I ++ ++ ++ + +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 L-KGFGITVYDLNEIDALSVYVDGADEINATRDMIKGGGAALTREKIVAAVADKFICIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ +++ G N R V+D GN+I
Sbjct: 119 NTKTVDVLGQFPLPVEVIPMAREYVAREIRK----LGGNPVWREG------VVTDNGNHI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + L I GV+ +GLF D +IGT DG
Sbjct: 169 LDVKGMAITDAKALEVRLNAIVGVVTNGLFAARGADVVLIGTPDGVIT 216
>gi|199599648|ref|ZP_03213026.1| ribose-5-phosphate isomerase A [Lactobacillus rhamnosus HN001]
gi|258509694|ref|YP_003172445.1| ribose-5-phosphate isomerase A [Lactobacillus rhamnosus GG]
gi|199589463|gb|EDY97591.1| ribose-5-phosphate isomerase A [Lactobacillus rhamnosus HN001]
gi|257149621|emb|CAR88594.1| Ribose-5-phosphate isomerase A [Lactobacillus rhamnosus GG]
gi|259650957|dbj|BAI43119.1| ribose-5-phosphate isomerase [Lactobacillus rhamnosus GG]
Length = 229
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 133/225 (59%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
MD ++K+ AA++A ++V DGMT+G+GTGST + +A +I + + +S T+
Sbjct: 1 MDQDKLKQEAAQKAAEFVEDGMTIGLGTGSTVFYLVEAIAQRIKEEHLSLTGVATSVRTQ 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + +DV +DL+IDG DE+D + IKG G + L EKI+A ++R I I
Sbjct: 61 KQAESLEIPMKALDDVDKIDLTIDGADEVDKHFQGIKGGGRSHLIEKIVAINSARNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K VD LG+ LP+E+ FG K L L + GL RL +GS ++D NY
Sbjct: 121 DETKLVDTLGKFPLPLEVIPFGSGKLLQRLADE----GLKPAYRLNEDGSK-ALTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P +++ L G++EHGLF+++V ++GT+ G
Sbjct: 176 IIDLHLGRIEHPHLLAEWLNKQVGIVEHGLFLDLVKTVVVGTTHG 220
>gi|58425344|gb|AAW74381.1| ribose-5-phosphate isomerase A [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 241
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L I + + V S ++T +
Sbjct: 29 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-HIGHRIKGAVSSSEQSTARL-RQ 86
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 87 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 146
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R + ++D GN ++D
Sbjct: 147 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWR------DVVLTDNGNVVLDVH 197
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 198 NLQITDPVALERSLNQIPGVVCVGLFARRPADVVIVGGE 236
>gi|74318382|ref|YP_316122.1| ribose-5-phosphate isomerase A [Thiobacillus denitrificans ATCC
25259]
gi|123611324|sp|Q3SGD3|RPIA_THIDA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|74057877|gb|AAZ98317.1| ribose 5-phosphate isomerase [Thiobacillus denitrificans ATCC
25259]
Length = 218
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 14/228 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MKR AR A+ Y G +G+GTGSTA F+ LA+ G + SS T
Sbjct: 1 MTQDEMKRAVARAAVDYAKGG-IIGVGTGSTANHFIDALAE--VKGRIEGTVASSEATAA 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + V +++ +DG DEI +IKG GGAL REKI+A + +F+ I D
Sbjct: 58 RLKSHGIQVLDLNSVGELEVYVDGADEITQHFAMIKGGGGALTREKIVAACSKQFVCIAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK VD LG+ LP+E+ + L + L + RLR F +D GN I
Sbjct: 118 DSKLVDVLGKFPLPVEVIPMARSHVARELVK------LGGQPRLREG----FTTDNGNVI 167
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I DP + + I GV+ +GLF D ++GTS G
Sbjct: 168 LDVHNLSIIDPVSLETAINQIVGVVTNGLFARRGADVLLLGTSTGVKT 215
>gi|312136235|ref|YP_004003572.1| ribose-5-phosphate isomerase [Methanothermus fervidus DSM 2088]
gi|311223954|gb|ADP76810.1| ribose-5-phosphate isomerase [Methanothermus fervidus DSM 2088]
Length = 224
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 10/232 (4%)
Query: 1 MDALQM-KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNT 58
MD+ + K+ A + + DG +G+GTG+T + F+ L +KI + IP+S +
Sbjct: 1 MDSRTLQKKLVGYEAAKRIKDGQVVGLGTGTTVRYFIEKLGEKIKERELDILGIPTSYQS 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
K IPL + E+ VD++IDG DE+D +L LIKG GGA +EKI+ ++A +FIVI
Sbjct: 61 FLLAKNCGIPLTTLEEHD-VDIAIDGADEVDKKLNLIKGKGGAHTQEKIVDYSAKKFIVI 119
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK VD LG+ +P+E+ +L + E G LR ++SD GN
Sbjct: 120 VDESKIVDELGKSPVPVEVIP----SSLRMVCENIKKLGGKPS--LRFYKYTPWISDNGN 173
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+I+D F I DP + EL NIPGV+E+G+F VD ++GT +G VL+
Sbjct: 174 FIIDVKFDSIGDPSRLEKELNNIPGVVENGIFSKNVDEVLVGTKNG-IKVLK 224
>gi|291615188|ref|YP_003525345.1| ribose 5-phosphate isomerase [Sideroxydans lithotrophicus ES-1]
gi|291585300|gb|ADE12958.1| ribose 5-phosphate isomerase [Sideroxydans lithotrophicus ES-1]
Length = 221
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
MKR A+ AI YV + +G+GTGSTA F+ LA +I N R V S + +
Sbjct: 4 TQDDMKRAVAQAAIAYVPNDCIVGVGTGSTANFFIDELA-RIKNKIRGAVASSEASAKRL 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ H I + S D + + +DG DEI + ++KG GGAL REKI+A A+ +FI + D
Sbjct: 63 -QGHGIEVLSLNDAGDLPVYVDGADEITRHMHMVKGGGGALTREKIVAAASQKFICVCDA 121
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK VD LG+ LPIE+ + G +LR F +D GN I+
Sbjct: 122 SKLVDVLGKFPLPIEVIPMARSYIARE----LVKLGGQPKLREG------FTTDNGNVIL 171
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
D I +P + L + GV+ +GLF D ++GT DG +
Sbjct: 172 DVHNLQIMNPVELETTLNQLAGVVTNGLFARRGADVLLLGTPDGVRTL 219
>gi|152998132|ref|YP_001342967.1| ribose 5-phosphate isomerase [Marinomonas sp. MWYL1]
gi|189043818|sp|A6W2V3|RPIA_MARMS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150839056|gb|ABR73032.1| ribose 5-phosphate isomerase [Marinomonas sp. MWYL1]
Length = 223
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ A+ A+ Y+ +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDELKQAVAKAAMAYIQPMLEADTIVGVGTGSTANLFIDELAKH--KGLFDGTVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H IP++ V S+ + +DG DE + L LIKG G AL REKI+A + F+
Sbjct: 59 ASAERLKKHGIPVYDLNSVDSIRVYVDGADESNDNLHLIKGGGAALTREKIVAACSDEFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V LG LP+EI G + R V+D
Sbjct: 119 CIADESKLVKVLGDFPLPVEIIPMARGHVARE----LVKLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
GN+I+D + I DP + + I GV+ +GLF D ++ T +G L+K
Sbjct: 169 GNHILDVYNLEILDPIALEKSIDGIVGVVTNGLFAKRSADVLLLATKEG-IKTLKK 223
>gi|315640173|ref|ZP_07895293.1| ribose 5-phosphate isomerase A [Enterococcus italicus DSM 15952]
gi|315484055|gb|EFU74531.1| ribose 5-phosphate isomerase A [Enterococcus italicus DSM 15952]
Length = 229
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 122/227 (53%), Gaps = 6/227 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFC 62
+ +K+ A YV D M +G+GTGSTA F+ L ++ +Q +P+S +
Sbjct: 1 MNLKQMVGIEAASYVKDDMIVGLGTGSTAYYFIEELGRRVQEEELHIQGVPTSFASRKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
K IP+ + ++VS VDL +DG DEI + + IKG G ALL EKI+A A + I I D+S
Sbjct: 61 KALGIPVKTIDEVSYVDLVVDGADEISADFQGIKGGGAALLFEKIVASYAKQVIWIVDQS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LGR LP+E+ +G + +E G RL +G L V+D ++I+D
Sbjct: 121 KLVTKLGRFPLPVEVVPYGEKQLFQLFEEK----GYRPSFRLTADGE-LLVTDCQHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I P + EL + GV+EHGLF+ MV IIG DG ++
Sbjct: 176 LHLDVIEQPHALDEELNQLVGVVEHGLFLEMVQTVIIGQEDGVKTIV 222
>gi|326796978|ref|YP_004314798.1| ribose-5-phosphate isomerase A [Marinomonas mediterranea MMB-1]
gi|326547742|gb|ADZ92962.1| Ribose-5-phosphate isomerase A [Marinomonas mediterranea MMB-1]
Length = 223
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ A+ A++Y+ + +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDELKKAVAQAAVEYILPLLEEDTIVGIGTGSTANLFIDELAQH--KHLFDGTVASSD 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H IP++ V+ + + IDG DE + L LIKG G AL REKI+A A F+
Sbjct: 59 ASAERLKGHGIPVYDLNSVAGMRVYIDGADESNHYLHLIKGGGAALTREKIVAACAEEFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V+ LG LP+E+ + G + R V+D
Sbjct: 119 CIADESKLVNVLGDFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN+I+D + I DP + ++ +I GV+ +GLF + D ++GT +G +
Sbjct: 169 GNHILDVYNLEIVDPIKLENQINSIVGVVTNGLFASRPADVLLLGTQEGVKTL 221
>gi|156742926|ref|YP_001433055.1| ribose-5-phosphate isomerase A [Roseiflexus castenholzii DSM 13941]
gi|189043823|sp|A7NNA4|RPIA_ROSCS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|156234254|gb|ABU59037.1| ribose 5-phosphate isomerase [Roseiflexus castenholzii DSM 13941]
Length = 234
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 138/231 (59%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
MD +R AA RA+ YV GM +G+GTGSTA + LA ++A+G RV +P+S T
Sbjct: 1 MDDHLYRRRAAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IPL + + S+DL++DG DEID LRLIKG GGA+LREKI+A +A+RF+V+
Sbjct: 61 AVLARELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVM 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
SKRV+ R LP+E+ FG+ + + G LR +G+ FV+D G
Sbjct: 121 ASVSKRVERLGERSPLPVEVVTFGMPLCIRR----LAALGGEPVLRCDHSGA-PFVTDEG 175
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N I+D FG I DP+ ++ +C IPGV+ HGLF+ M A+I DG +
Sbjct: 176 NLILDCHFGVIADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGIVEL 226
>gi|119487584|ref|ZP_01621194.1| ribose-5-phosphate isomerase A [Lyngbya sp. PCC 8106]
gi|119455753|gb|EAW36889.1| ribose-5-phosphate isomerase A [Lyngbya sp. PCC 8106]
Length = 236
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 126/229 (55%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L +++ +G ++ +P+S + K
Sbjct: 10 MKQQVGKAAADRVQSGSIVGLGTGSTTAYTLQYLGERLQSGELKDIKGVPTSFQSSVLAK 69
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + +++ +D++IDG DE+D LIKG G A REKI+ A +FIV+ D SK
Sbjct: 70 QYGIPLTTLDEIDHMDIAIDGADEVDPNKNLIKGGGAAHTREKIVDSLADQFIVVVDSSK 129
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ + ++ +++ G LR+ +G ++D GN ++D
Sbjct: 130 LVDKLGSTFLLPVEVIPLAITPVMNKIEK----LGGKPTLRMGVKKAGPVITDQGNMVID 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I +P + L NIPGV+E+GLF+ + D ++G DG+ L+ +
Sbjct: 186 VKFDSIDNPAELEKTLNNIPGVLENGLFVGVADVILVGEIKDGKPLIRE 234
>gi|300864444|ref|ZP_07109315.1| Ribose-5-phosphate isomerase A [Oscillatoria sp. PCC 6506]
gi|300337588|emb|CBN54463.1| Ribose-5-phosphate isomerase A [Oscillatoria sp. PCC 6506]
Length = 238
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 126/228 (55%), Gaps = 8/228 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKI 64
K+ A V GM +G+GTGSTA + L D+I G ++ + +S E K
Sbjct: 12 KQQVGYAAADRVKSGMIVGLGTGSTAAYMIEALGDRIKAGTLKDIKGVTTSFQGEVLAKQ 71
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ +PL + +++ +D++IDG DE+D +L LIKG G A REKI+ + A +FIV+ D SK
Sbjct: 72 YGVPLTTLDEIDRIDVAIDGADEVDPQLNLIKGGGAAHTREKIVDYLAEQFIVVVDGSKI 131
Query: 125 VD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
VD +P+E+ + + A+ + G ELR+ +G ++D GN ++D
Sbjct: 132 VDKLGSTFRVPVEVLPMAITPVMRAIAK----LGGEPELRMGVRKAGPVITDQGNMVIDV 187
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I +P + L NIPGV+E+GLFI + D ++G DG+ ++ +
Sbjct: 188 KFNTIDNPGELEKTLNNIPGVLENGLFIGVTDLVLVGEIKDGQPIIRE 235
>gi|325917033|ref|ZP_08179272.1| ribose-5-phosphate isomerase [Xanthomonas vesicatoria ATCC 35937]
gi|325536784|gb|EGD08541.1| ribose-5-phosphate isomerase [Xanthomonas vesicatoria ATCC 35937]
Length = 215
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGTLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LAMTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 NLQITDPVALERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|284008409|emb|CBA74844.1| ribose 5-phosphate isomerase A [Arsenophonus nasoniae]
Length = 222
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++Y+ M +G+GTGST F+ LA + + + V S +T+
Sbjct: 1 MTQDELKKMVGWAAVEYIKPDMVVGVGTGSTVAHFIDSLATQ-KHLIKGAVSSSVASTDK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP+ +V VD+ IDG DE + L +IKG G AL REK+IA A +FI I D
Sbjct: 60 LTAL-AIPILDSNEVDGVDIYIDGADEFNPDLMMIKGGGAALTREKVIAAMAKQFIAIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK+VD LG LP+E+ G E R V+D GN I
Sbjct: 119 KSKQVDILGAFPLPVEVIPMARAYVARE----LVKLGGLPEYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
+D I DP + ++ I GV+ GLF I D ++ T G + K
Sbjct: 169 LDVHNLKILDPIELENKINAIAGVVTVGLFAIRAADIVLLATPTGVEKLTAK 220
>gi|255024131|ref|ZP_05296117.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL J1-208]
Length = 223
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A +A +++ DGM +G+GTGST + L + NG + + +S T
Sbjct: 1 MNQ---KKIAGEKACEWIEDGMVVGLGTGSTVYYTIEKLGQMVNNGLHITGVATSEETTK 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I +
Sbjct: 58 QAEKLGIPLKSLNDVTEIDVTIDGADEIDANFQGIKGGGGALLREKMVASASLKNIWVVS 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K V LG+ LP+E+ FG + L + L +++ ++V++ GNYI
Sbjct: 118 EEKLVRTLGKFPLPVEVIPFGWKQIERILAKEHIQTNLR-----KQSSGEVYVTNNGNYI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D D ++ +L IPGV+EHGLF++ VD I G ++GE +++K
Sbjct: 173 LDIVNQSFTDAKMWQEKLAQIPGVVEHGLFLDYVDVIICGKANGETEIIKK 223
>gi|254167405|ref|ZP_04874257.1| ribose 5-phosphate isomerase A [Aciduliprofundum boonei T469]
gi|197623668|gb|EDY36231.1| ribose 5-phosphate isomerase A [Aciduliprofundum boonei T469]
Length = 230
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 133/227 (58%), Gaps = 7/227 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
++KR A RA++Y+ DGM +G+GTGST K ++ L + + +G + IP+S TE
Sbjct: 4 KEELKRKAGERAVEYIKDGMVVGLGTGSTVKYTILKLGELVKDGLDIIGIPTSIATEKLA 63
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
K I L S D +DL+IDG DE+D L LIKG GGALLREK+IAHA+ I++ DES
Sbjct: 64 KEMGIKLGSINDYQVIDLTIDGADEVDRNLNLIKGGGGALLREKMIAHASKYEIIVVDES 123
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K LG LPIEI +FG +T++ L + + LR +++D GNYIVD
Sbjct: 124 KVKSVLGDFPLPIEIVKFGYKRTMNVLSTLGC------KPLLRVKNGEAYITDNGNYIVD 177
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
F I +P + + IPGV+E GLF+ + + I+G D + ++
Sbjct: 178 CKFERIDEPAKLERRIDEIPGVVEVGLFVGLTNKVIVGKKD-KIEIM 223
>gi|15678636|ref|NP_275751.1| ribose-5-phosphate isomerase A [Methanothermobacter
thermautotrophicus str. Delta H]
gi|6226032|sp|P72012|RPIA_METTH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|1669358|dbj|BAA13646.1| orf2 [Methanothermobacter thermautotrophicus]
gi|2621688|gb|AAB85114.1| ribose 5-phosphate isomerase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 226
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 6/227 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ AA RA+ + DG +G+GTGST F+ L ++ G V +P+S +
Sbjct: 5 MNLKKMAALRAVDEIDDGDVVGLGTGSTTHYFIEELGRRVREEGLEVMGVPTSYQSMFLA 64
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
I + S + VD+++DG DE+D L LIKG G A EKI+ +A+ FIVI DES
Sbjct: 65 AESGIKVTSLAEHD-VDVAVDGADEVDPDLNLIKGGGAAHTLEKIVDSSAASFIVIVDES 123
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ K G + +R G V+D GN+++D
Sbjct: 124 KLVERLGAFPLPVEVIPAACRPV----KLKLESMGASVNIRSSEGKDGPVVTDNGNFVLD 179
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
A FG I DP + L NIPGV+E+G+F + D I GTS+G ++
Sbjct: 180 AAFGVIDDPGAMESRLNNIPGVVENGIFAGIADMVIAGTSEGLKILR 226
>gi|315498528|ref|YP_004087332.1| ribose 5-phosphate isomerase [Asticcacaulis excentricus CB 48]
gi|315416540|gb|ADU13181.1| ribose 5-phosphate isomerase [Asticcacaulis excentricus CB 48]
Length = 230
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 91/225 (40%), Positives = 132/225 (58%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A K+ A AI ++ GM +G+GTGSTA F+ +AD + +G ++ ++ +S T +
Sbjct: 1 MSADTQKQAAGLAAIDHIESGMKVGLGTGSTAAWFVKAVADAVRDGLKLTLVSTSNQTTH 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + DV +D+ +DG DEI S L LIKG GGALLREK+I A R IVI D
Sbjct: 61 LAQSLGLEIKDINDVGKLDVCVDGADEIGSGLALIKGGGGALLREKLIWEMADRCIVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V LG LPIE++ F T++ + +V S F + + LR+ G FV+DGGN I
Sbjct: 121 AAKHVATLGAFALPIEVEPFAYKGTINRICDVLSEFDIAKLPVLRKKGGESFVTDGGNLI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
D G I DP ++ L GV++HGLF+++ D A+IGT G
Sbjct: 181 FDVPCGAILDPSGLASALKATTGVVDHGLFLDLADVALIGTDSGV 225
>gi|294634870|ref|ZP_06713392.1| ribose 5-phosphate isomerase A [Edwardsiella tarda ATCC 23685]
gi|291091743|gb|EFE24304.1| ribose 5-phosphate isomerase A [Edwardsiella tarda ATCC 23685]
Length = 219
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ LA G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTASHFIDALATM--KGQIEGAVSSSDASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V ++D+ +DG DEI+ +++IKG G AL REKI+A A +F+ I D
Sbjct: 59 KLKSLGIPVFDLNEVDALDIYVDGADEINHAMQMIKGGGAALTREKIVAAVAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LP+E+ + G R ++D GN I
Sbjct: 119 ASKQVDILGNFPLPVEVIPMARSYVARE----LVKLGGQPVYRQG------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + + I GV+ GLF N D ++G ++G +
Sbjct: 169 LDVHNLQIMEPCKLENAINAIAGVVTVGLFANRGADVVLVGCAEGVKTL 217
>gi|225451299|ref|XP_002278297.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 283
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 131/235 (55%), Gaps = 7/235 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A+ YV GM LG+GTGSTA + L + G + +P+S+ TE
Sbjct: 51 TQDDLKKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGHLLKTGQLSDIVGVPTSKRTE 110
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + S+DL+IDG DE+D L L+KG GGALLREK++ A+ +F+V+
Sbjct: 111 EQALSLGIPLSVLDHHPSIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVV 170
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D++K V+ LG +P+E+ QF L L+E+ G +LRL +G +V+D
Sbjct: 171 DDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLNPDGK-PYVTDNS 229
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F I D E+ + GV+EHGLF++M II DG V K
Sbjct: 230 NYIVDLYFKTPIKDSIAAGKEISSFEGVVEHGLFLDMATAVIIAGKDG-VTVKTK 283
>gi|229546972|ref|ZP_04435697.1| ribose-5-phosphate isomerase A [Enterococcus faecalis TX1322]
gi|257421492|ref|ZP_05598482.1| ribose-5-phosphate isomerase A [Enterococcus faecalis X98]
gi|312952598|ref|ZP_07771462.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0102]
gi|229307900|gb|EEN73887.1| ribose-5-phosphate isomerase A [Enterococcus faecalis TX1322]
gi|257163316|gb|EEU93276.1| ribose-5-phosphate isomerase A [Enterococcus faecalis X98]
gi|310629386|gb|EFQ12669.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0102]
gi|315153618|gb|EFT97634.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0031]
gi|315156202|gb|EFU00219.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0043]
gi|315158653|gb|EFU02670.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0312]
gi|323479414|gb|ADX78853.1| ribose 5-phosphate isomerase A [Enterococcus faecalis 62]
gi|327533996|gb|AEA92830.1| ribose-5-phosphate isomerase [Enterococcus faecalis OG1RF]
Length = 226
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 127/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + +I G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRIKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|21232694|ref|NP_638611.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767231|ref|YP_241993.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990314|ref|YP_001902324.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
campestris str. B100]
gi|30173319|sp|Q8P5S1|RPIA_XANCP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|81306786|sp|Q4UYA0|RPIA_XANC8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|229564212|sp|B0RP81|RPIA_XANCB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|21114504|gb|AAM42535.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572563|gb|AAY47973.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732074|emb|CAP50266.1| ribose-5-phosphate isomerase [Xanthomonas campestris pv.
campestris]
Length = 215
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGTLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGNFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 NLHITDPVALERNLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|152979997|ref|YP_001353998.1| ribose-5-phosphate isomerase A [Janthinobacterium sp. Marseille]
gi|166200047|sp|A6T0F1|RPIA_JANMA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|151280074|gb|ABR88484.1| ribose 5-phosphate isomerase A [Janthinobacterium sp. Marseille]
Length = 223
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 118/226 (52%), Gaps = 9/226 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AR AI YVV G +G+GTGSTA F+ L KI + + + SS T
Sbjct: 1 MTQDEMKQAVARAAIDYVVAGEIIGVGTGSTANFFIDELG-KIKDRIK-GAVASSEATAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + D+ S+ + IDG DEI ++ +IKG G AL REKI+A A +F+ I D
Sbjct: 59 RLRAHGITIFDLNDIDSMSVYIDGADEITAQGAMIKGGGAALTREKIVASVAKKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG+ LP+E+ L L E RLR V+D G YI
Sbjct: 119 GSKLVDKLGKFPLPVEVIPMAQAVVARKLAA------LGGEPRLRVKDGKAVVTDNGCYI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
+D I DP + ++ +I GV+ GLF D A++GT+DG
Sbjct: 173 IDVLGLQIEDPATLEAQINDIVGVVTVGLFARRGADIALLGTADGV 218
>gi|58040140|ref|YP_192104.1| ribose 5-phosphate isomerase [Gluconobacter oxydans 621H]
gi|67461237|sp|Q5FQ98|RPIA_GLUOX RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|58002554|gb|AAW61448.1| Ribose 5-phosphate isomerase [Gluconobacter oxydans 621H]
Length = 231
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 90/227 (39%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ KR AAR A V GM +G+GTGSTA + L +++A G + IP+S ++E+
Sbjct: 6 MNVH--KRTAAREAADMVKSGMVVGLGTGSTAAYMIERLGERVAEGLEIFGIPTSDDSED 63
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL +D++IDG DE+ L LIKG GGALLREKI+A AA RF+VI
Sbjct: 64 KALKAGIPLTDFSAHRRIDIAIDGADEVQRGSLNLIKGLGGALLREKIVAQAAKRFVVIV 123
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D +K VD R +P+E+ FG T E + G LFV+D GN
Sbjct: 124 DGTKPVDLLGERAPVPVEVISFGWECTA----ERLAACGARGVKPRTDRAGSLFVTDTGN 179
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
I+D FG I P+ ++ ++ I GV+EHG+F+NM ++ T DG
Sbjct: 180 MILDCHFGPIEKPEELAEKIDRIVGVVEHGMFLNMASEVLVATPDGV 226
>gi|159467673|ref|XP_001692016.1| ribose-5-phosphate isomerase [Chlamydomonas reinhardtii]
gi|158278743|gb|EDP04506.1| ribose-5-phosphate isomerase [Chlamydomonas reinhardtii]
Length = 269
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 134/235 (57%), Gaps = 8/235 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
++K+ AA +A++YV GM +G+GTGSTA + + + G + +P+S T
Sbjct: 32 SQDELKKQAAWKAVEYVKSGMVVGLGTGSTAAFAVDRIGQLLKEGKLQNIVGVPTSIRTY 91
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + ++ +D++IDG DE+D L ++KG GGALLREK++ A+++F+ I
Sbjct: 92 EQALSLGIPLATLDEQPKLDVAIDGADEVDPNLDVVKGRGGALLREKMVEMASAKFVCIV 151
Query: 120 DESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D+SK V+ + +P+EI QF TL L + G E +LR NG +V+D
Sbjct: 152 DDSKLVEGLGGSKLAMPVEIVQFCHKYTLQRLANLPEVKGC--EAKLRMNGDKPYVTDNS 209
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F I D Q S + + GV++HGLF++MVD II + G V ++
Sbjct: 210 NYIVDLYFQTPIKDSQAASKAILGLDGVVDHGLFLDMVDVCIIAGATG-VTVQER 263
>gi|22126769|ref|NP_670192.1| ribose 5-phosphate isomerase A [Yersinia pestis KIM 10]
gi|45441126|ref|NP_992665.1| putative ribose 5-phosphate isomerase [Yersinia pestis biovar
Microtus str. 91001]
gi|21959794|gb|AAM86443.1|AE013892_1 putative ribose 5-phosphate isomerase A [Yersinia pestis KIM 10]
gi|45435985|gb|AAS61542.1| putative ribose 5-phosphate isomerase [Yersinia pestis biovar
Microtus str. 91001]
Length = 250
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 3/229 (1%)
Query: 3 ALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
KR AARR I +V DGMTLG+G+G+T+ F+ L +A G ++ +SR T
Sbjct: 19 QNDAKRAAARRVIQDFVFDGMTLGLGSGTTSHFFVRELGQHVAKGLQLTCTTTSRATSEV 78
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I L P +++ +DL+IDG DEID R +IKG G LL EKIIAHA+ R I I DE
Sbjct: 79 ARDVGIELSDPNEMNEIDLTIDGPDEIDRRFNMIKGGGACLLWEKIIAHASKRMICICDE 138
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYI 180
+K V+ LG+ LP+EI F +T ++ V + GL+ +RR G G ++D GN+I
Sbjct: 139 TKIVNCLGQFPLPVEIVPFAWKQTERRVERVLAEQGLHHVPIIRRMGGGHPVITDSGNFI 198
Query: 181 VDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D G I P+ + EL IPGV+E+GLF ++G DG V
Sbjct: 199 LDCHCGAIITAPEPLEIELNRIPGVVENGLFTREATGMVVGYFDGSSYV 247
>gi|258622361|ref|ZP_05717386.1| Ribose-5-phosphate isomerase A [Vibrio mimicus VM573]
gi|258625344|ref|ZP_05720243.1| Ribose-5-phosphate isomerase A [Vibrio mimicus VM603]
gi|262166517|ref|ZP_06034254.1| ribose 5-phosphate isomerase A [Vibrio mimicus VM223]
gi|258582385|gb|EEW07235.1| Ribose-5-phosphate isomerase A [Vibrio mimicus VM603]
gi|258585377|gb|EEW10101.1| Ribose-5-phosphate isomerase A [Vibrio mimicus VM573]
gi|262026233|gb|EEY44901.1| ribose 5-phosphate isomerase A [Vibrio mimicus VM223]
Length = 218
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-SIKEEIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DVS +D+ +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNDVSELDIYVDGADEINPERDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I P+ + ++ IPGV+ GLF + D I GT G +
Sbjct: 169 LDVYNMKITHPKDLETKINGIPGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|116496102|ref|YP_807836.1| ribose-5-phosphate isomerase A [Lactobacillus casei ATCC 334]
gi|239630533|ref|ZP_04673564.1| ribose-5-phosphate isomerase A [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301067687|ref|YP_003789710.1| ribose 5-phosphate isomerase [Lactobacillus casei str. Zhang]
gi|122262498|sp|Q034H8|RPIA_LACC3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|116106252|gb|ABJ71394.1| ribose-5-phosphate isomerase [Lactobacillus casei ATCC 334]
gi|239526816|gb|EEQ65817.1| ribose-5-phosphate isomerase A [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300440094|gb|ADK19860.1| Ribose 5-phosphate isomerase [Lactobacillus casei str. Zhang]
Length = 229
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 132/225 (58%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K+ AA+RA ++V DGMT+G+GTGST + +A +I + + +S T
Sbjct: 1 MDQNKLKQEAAQRAAEFVEDGMTIGLGTGSTVVYLVEAIAQRIKDEHLNLTGVATSVRTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + ++V +DL+IDG DE+D + IKG G + L EKI+A ++R I I
Sbjct: 61 KQAESLGIPMKALDEVGQIDLTIDGADEVDKHFQGIKGGGRSHLIEKIVAINSARNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K VD LG+ LP+E+ FG K L L + GL RL +GS ++D NY
Sbjct: 121 DETKLVDTLGKFPLPLEVIPFGSGKLLQRLADE----GLKPAYRLNEDGSK-ALTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P +++ L G++EHGLF+++V ++GT+ G
Sbjct: 176 IIDLHLGKIEHPHLLAEWLNKQVGIVEHGLFLDLVKTVVVGTTHG 220
>gi|15595527|ref|NP_249021.1| ribose-5-phosphate isomerase A [Pseudomonas aeruginosa PAO1]
gi|107099313|ref|ZP_01363231.1| hypothetical protein PaerPA_01000325 [Pseudomonas aeruginosa PACS2]
gi|116054057|ref|YP_788500.1| ribose-5-phosphate isomerase A [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889071|ref|YP_002437935.1| ribose-5-phosphate isomerase A [Pseudomonas aeruginosa LESB58]
gi|254237435|ref|ZP_04930758.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa C3719]
gi|254243428|ref|ZP_04936750.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa 2192]
gi|296386824|ref|ZP_06876323.1| ribose-5-phosphate isomerase A [Pseudomonas aeruginosa PAb1]
gi|313112055|ref|ZP_07797839.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa 39016]
gi|30173377|sp|Q9I6G1|RPIA_PSEAE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|122261802|sp|Q02U86|RPIA_PSEAB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226734915|sp|B7V2P3|RPIA_PSEA8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|9946178|gb|AAG03719.1|AE004471_2 ribose 5-phosphate isomerase [Pseudomonas aeruginosa PAO1]
gi|115589278|gb|ABJ15293.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169366|gb|EAZ54877.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa C3719]
gi|126196806|gb|EAZ60869.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa 2192]
gi|218769294|emb|CAW25054.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa LESB58]
gi|310884341|gb|EFQ42935.1| ribose 5-phosphate isomerase [Pseudomonas aeruginosa 39016]
Length = 223
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ Q+K+ A+ A+ +++ +G+GTGSTA F+ LA A + SS
Sbjct: 1 MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAE--FDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE + RL LIKG G AL REKI+A A FI
Sbjct: 59 ATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG+ LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPILGQFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I P + ++ I GV+ +GLF D ++GT+DG +
Sbjct: 169 GNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVKTL 221
>gi|218288520|ref|ZP_03492797.1| ribose 5-phosphate isomerase [Alicyclobacillus acidocaldarius LAA1]
gi|218241177|gb|EED08352.1| ribose 5-phosphate isomerase [Alicyclobacillus acidocaldarius LAA1]
Length = 224
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 6/223 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
++ KR A A + + GM +G+GTGSTA ++ + ++ G + IP+SR TE +
Sbjct: 1 MEKKRMAGEAAAKRIQSGMKVGLGTGSTAYYTIVEVGRRVKEGLEIVAIPTSRETERLAR 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL +DL+IDG D + L+LIKG GGALLREK++A + I++ D+SK
Sbjct: 61 ELGIPLTDFRSCPRLDLTIDGADAVTPDLQLIKGGGGALLREKLVASISDELIIVVDDSK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
D L +P+E+ F T +++ L LR FV+D NYI+D
Sbjct: 121 LYDSLSGLAIPVEVVPFAWETTARRIEQ------LGGRWTLRERNGETFVTDNHNYILDT 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
F + DP ++ L GV+E GLFI+M IGT +G
Sbjct: 175 VFDEVVDPADLARRLKLTTGVVESGLFIDMASEVAIGTDEGVV 217
>gi|257876124|ref|ZP_05655777.1| ribose-5-phosphate isomerase A [Enterococcus casseliflavus EC20]
gi|257810290|gb|EEV39110.1| ribose-5-phosphate isomerase A [Enterococcus casseliflavus EC20]
Length = 224
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 6/222 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K A YV DGM +G+GTGSTA + L ++ G + +P+S ++
Sbjct: 1 MNLKEMVGIEAASYVKDGMVVGLGTGSTAYYMIEELGRRVKEEGLSITGVPTSWASKKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IP+ + ++V +VDL+IDG DEI IKG G ALL EKI+A + + + I DES
Sbjct: 61 EGLGIPIRTIDEVDAVDLTIDGADEISQDYHGIKGGGAALLFEKIVASNSKKVLWIVDES 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ +G + L ++ + +LRL G +D NYI+D
Sbjct: 121 KMVETLGAFPLPVEVIPYGSQQLLRLFEKK----NYHPKLRLNEEGE-PLKTDCSNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I P ++ EL GV+EHGLF++MV I+G +G
Sbjct: 176 LHLETITAPTELAQELDATVGVVEHGLFLDMVHTIIVGLPEG 217
>gi|257866519|ref|ZP_05646172.1| ribose-5-phosphate isomerase A [Enterococcus casseliflavus EC30]
gi|257872965|ref|ZP_05652618.1| ribose-5-phosphate isomerase A [Enterococcus casseliflavus EC10]
gi|325567386|ref|ZP_08144053.1| ribose 5-phosphate isomerase A [Enterococcus casseliflavus ATCC
12755]
gi|257800477|gb|EEV29505.1| ribose-5-phosphate isomerase A [Enterococcus casseliflavus EC30]
gi|257807129|gb|EEV35951.1| ribose-5-phosphate isomerase A [Enterococcus casseliflavus EC10]
gi|325158819|gb|EGC70965.1| ribose 5-phosphate isomerase A [Enterococcus casseliflavus ATCC
12755]
Length = 224
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 6/222 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K A YV DGM +G+GTGSTA + L ++ G + +P+S ++
Sbjct: 1 MNLKEMVGIEAASYVKDGMVVGLGTGSTAYYMIEELGRRVKEEGLSITGVPTSWASKKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IP+ + ++V +VDL+IDG DEI IKG G ALL EKI+A + + + I DES
Sbjct: 61 EGLGIPIRTIDEVDAVDLTIDGADEISKDYHGIKGGGAALLFEKIVASNSKKVLWIVDES 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ +G + L ++ + +LRL G +D NYI+D
Sbjct: 121 KMVETLGAFPLPVEVIPYGSQQLLRLFEKK----NYHPKLRLNEEGE-PLKTDCSNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I P ++ EL GV+EHGLF++MV I+G +G
Sbjct: 176 LHLETITAPTELAQELDATVGVVEHGLFLDMVHTIIVGLPEG 217
>gi|49078692|gb|AAT49810.1| PA0330 [synthetic construct]
Length = 224
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ Q+K+ A+ A+ +++ +G+GTGSTA F+ LA A + SS
Sbjct: 1 MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAE--FDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE + RL LIKG G AL REKI+A A FI
Sbjct: 59 ATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG+ LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPILGQFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I P + ++ I GV+ +GLF D ++GT+DG +
Sbjct: 169 GNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVKTL 221
>gi|259047802|ref|ZP_05738203.1| ribose 5-phosphate isomerase [Granulicatella adiacens ATCC 49175]
gi|259035479|gb|EEW36734.1| ribose 5-phosphate isomerase [Granulicatella adiacens ATCC 49175]
Length = 222
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 121/225 (53%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ MK ++A +YV GMT+G+GTGSTA F+ + ++ G + + +S T+
Sbjct: 1 MNMKELVGKKAAEYVESGMTVGLGTGSTAYYFVEEIGRRVKEEGLEIVGVTTSLATKKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V +D++IDG DEI IKG GGALL EKI+A + I I DES
Sbjct: 61 EALGIPLKSVDEVDYIDVTIDGADEIAPDFSGIKGGGGALLFEKIVAEQSKSVIWIVDES 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD+LGR LP+E+ +G + + G R R +++D NYI+D
Sbjct: 121 KMVDYLGRFPLPVEVVPYGSLQLFKRFE----ALGYKPTFRER--DGERYLTDSKNYIID 174
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I DP ++ + GV+E GLF NM D ++GT DG +
Sbjct: 175 LDVYPIKDPIAFGEKIKGMTGVVEQGLFTNMTDIVLVGTPDGVVV 219
>gi|71896441|ref|NP_001026341.1| ribose-5-phosphate isomerase [Gallus gallus]
gi|53136558|emb|CAG32608.1| hypothetical protein RCJMB04_30l19 [Gallus gallus]
Length = 235
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
A + KR AA A+ +V + LG+G+GST + LA+++ + IP+S
Sbjct: 2 AEEAKRLAACAAVDKHVQNNQVLGIGSGSTIVHAVHRLAERVKQENLSIVCIPTSFQARQ 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + +D++IDG DE+DS L LIKG GG L +EKI+A A FIVI D
Sbjct: 62 LILQNGLTLSDLDRHPELDVAIDGADEVDSDLNLIKGGGGCLTQEKIVAGYAKCFIVIAD 121
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K+ + + +PIE+ AL + FG ELR+ + +G V+D G
Sbjct: 122 YRKKSENLGEQWKKGIPIEVIPMAYVPVTRALTKN---FGGAAELRMAVSKAGPVVTDNG 178
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+I+D F + + ++ + IPGV+E GLFI+M + G DG V +K
Sbjct: 179 NFILDWKFDKVHEWSEVNTAIKMIPGVVETGLFIDMAEVVYFGMEDGSVSVREK 232
>gi|307278597|ref|ZP_07559667.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0860]
gi|306504657|gb|EFM73857.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0860]
Length = 226
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 128/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TEN
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETENQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|312869614|ref|ZP_07729765.1| ribose 5-phosphate isomerase A [Lactobacillus oris PB013-T2-3]
gi|311094900|gb|EFQ53193.1| ribose 5-phosphate isomerase A [Lactobacillus oris PB013-T2-3]
Length = 227
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/225 (33%), Positives = 123/225 (54%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
M+ ++K + A++++ DGM + +GTGST + + L ++ G V + +S
Sbjct: 1 MNQNELKALVGQAAVRFIEDGMIVSLGTGSTVRYMVDALGKRVQEEGLNVIGVTTSNRMT 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + ++V +DL IDG DEID+ IKG GGALL EKI+ +A+++ I I
Sbjct: 61 AQAQSLGITIKDIDEVDHIDLCIDGADEIDTDFNGIKGGGGALLWEKIVNNASTKRIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V +G +P+E+ FG + + G + RL + + +D N+
Sbjct: 121 DESKLVKRIGNFGVPVEVIPFGAQHVFNYFAKQ----GYHPAWRL-TDDGAKYRTDEKNF 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I DP+ ++ +L + GV+EHGLF+N VD I+G DG
Sbjct: 176 IIDLKVGEIADPKALAEDLIHTVGVVEHGLFLNQVDQVIVGRQDG 220
>gi|269101830|ref|ZP_06154527.1| ribose 5-phosphate isomerase A [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161728|gb|EEZ40224.1| ribose 5-phosphate isomerase A [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 219
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ LA + + SS +
Sbjct: 1 MTQDEMKKAAGWAALEYVKKGSIVGVGTGSTVNHFIDALATRKEE--IKGAVSSSVASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V+S+D+ +DG DEI+ +IKG G AL REKI+A A ++ I D
Sbjct: 59 RLKQIGIPVFDANEVASLDIYVDGADEINGEFDMIKGGGAALTREKIVAAIAKTYVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R +D GN I
Sbjct: 119 NTKEVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPVYRQG------VTTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I +P+ + + I GV+ GLF + D ++G DG V +
Sbjct: 169 LDVHNMQITNPKAMEDAINGIAGVVTVGLFAHRGADILLVGAPDGVKKVEK 219
>gi|322834200|ref|YP_004214227.1| ribose 5-phosphate isomerase [Rahnella sp. Y9602]
gi|321169401|gb|ADW75100.1| ribose 5-phosphate isomerase [Rahnella sp. Y9602]
Length = 220
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQEELKKAVGWAALDYVTPGTIVGVGTGSTAAHFIDALGS--IKGQIEGAVSSSDASTA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIHVFDSNEVDSLDVYVDGADEINGSMQMIKGGGAALTREKIIAAIAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R ++D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VLTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D I D + ++ +I GV+ GLF N D A++GTS+G V K
Sbjct: 169 LDVHNLNILDAVAMENKINSIAGVVTVGLFANRGADVALVGTSEGVKTVKLK 220
>gi|301630612|ref|XP_002944410.1| PREDICTED: ribose-5-phosphate isomerase A 2-like [Xenopus
(Silurana) tropicalis]
Length = 249
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 3/230 (1%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ K + +AI Y+ GM +G+G+G+T+ F+ LA ++A GF + +P+S T
Sbjct: 18 QDKAKLASGIKAIDHYLKPGMKVGLGSGTTSHWFVRALAQRVAQGFEIAGVPTSNATREL 77
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+PL V +D++IDG DEID + +IKG G LL EKI+A A+ + + + D+
Sbjct: 78 ALELGVPLTDLGAVDRLDITIDGADEIDHQGSMIKGGGACLLWEKIVAAASRKMVAVVDD 137
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE--ELRLRRNGSGLFVSDGGNY 179
K + LGR LPIEI FG T L+ + + G + ++ R G ++D G+
Sbjct: 138 KKVFERLGRFPLPIEIIPFGWQSTERQLRALFADAGYDRDLKITTRMKDDGPLLTDSGHL 197
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I+D G I D ++ IPGV+E+GLF+ + + I+G +DG ++
Sbjct: 198 ILDCHVGSIHDTHALAPRFNAIPGVVENGLFVGIANEMIVGHADGTSDIV 247
>gi|300722096|ref|YP_003711378.1| ribosephosphate isomerase, constitutive [Xenorhabdus nematophila
ATCC 19061]
gi|297628595|emb|CBJ89169.1| ribosephosphate isomerase, constitutive [Xenorhabdus nematophila
ATCC 19061]
Length = 219
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV +G+GTGSTA F+ L I + + V S +TE
Sbjct: 1 MTQDELKKAVGWAALEYVKPDTIVGVGTGSTAAHFIDALG-TIKDKIKGTVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ DV ++D+ +DG DEI+ ++++IKG G AL REK+IA A +FI I D
Sbjct: 60 L-KSLGIPVFDCNDVDTLDIYVDGADEINGQMQMIKGGGAALTREKVIAALAKKFICIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ L ++ E + V+D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARAYVARELVKLGGTPVYRENV----------VTDNGNDI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I D + ++ I GV+ GLF N + +IGT DG + +
Sbjct: 169 LDVHNLSIVDAIELENKVNGIMGVVTVGLFANRGANVVLIGTKDGVRTLTE 219
>gi|157960644|ref|YP_001500678.1| ribose-5-phosphate isomerase A [Shewanella pealeana ATCC 700345]
gi|189043827|sp|A8H0Q6|RPIA_SHEPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|157845644|gb|ABV86143.1| ribose 5-phosphate isomerase [Shewanella pealeana ATCC 700345]
Length = 219
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV + +G+GTGST F+ LA + + SS +
Sbjct: 1 MTQDEMKKAAGWAALQYVEENSIVGVGTGSTVNHFIDALATMKFD--IEGAVSSSEASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ V+ + + +DG DEI+S++ +IKG G AL REKI+A A +FI I D
Sbjct: 59 KMKALGIPVFDLNSVNELSVYVDGADEINSQMDMIKGGGAALTREKIVAAVADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LPIE+ + + + G + R V+D GN I
Sbjct: 119 NTKQVDILGEFPLPIEVIPMARSYVARQIVK----LGGDPVYREG------CVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I P+ + ++ I GV+ +GLF D ++GT +G V
Sbjct: 169 IDVYNMKIMKPKELEQQIDGIVGVVTNGLFAKRGADILLVGTPEGVKTV 217
>gi|116071176|ref|ZP_01468445.1| Ribose 5-phosphate isomerase [Synechococcus sp. BL107]
gi|116066581|gb|EAU72338.1| Ribose 5-phosphate isomerase [Synechococcus sp. BL107]
Length = 239
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 83/233 (35%), Positives = 130/233 (55%), Gaps = 9/233 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A++ + +GM LG+G+GSTA + L K+A+G + + +S E
Sbjct: 5 QTQMKQAVADAAVEQIKNGMVLGLGSGSTAALMIRALGAKLASGELKNIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELNIPLLSLNAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVAAMADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ +++ + G + ELR+ + +G V+D GN
Sbjct: 125 STKLVDRLNLDFLLPVEVLPGAW----RQVQKTLASMGGSAELRMAQRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
++D G I DP + + NIPGV+E+GLF+N+ D ++G SDG V
Sbjct: 181 VLDVKLNGGIDDPASLEKSINNIPGVLENGLFVNLTDEVLVGEISDGVAGVRS 233
>gi|191639608|ref|YP_001988774.1| ribose-5-phosphate isomerase A [Lactobacillus casei BL23]
gi|190713910|emb|CAQ67916.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Lactobacillus casei BL23]
gi|327383719|gb|AEA55195.1| Ribose 5-phosphate isomerase [Lactobacillus casei LC2W]
gi|327386912|gb|AEA58386.1| Ribose 5-phosphate isomerase [Lactobacillus casei BD-II]
Length = 229
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 86/225 (38%), Positives = 133/225 (59%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K+ AA+RA ++V DGMT+G+GTGST + +A +I F + + +S T
Sbjct: 1 MDQNKLKQEAAQRAAEFVEDGMTIGLGTGSTVVYLVEAIAQRIKDEHFNLTGVATSVRTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + ++V +DL+IDG DE+D + IKG G + L EKI+A ++R I I
Sbjct: 61 KQAESLGIPMKALDEVGQIDLTIDGADEVDKHFQGIKGGGRSHLIEKIVAINSARNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K VD LG+ LP+E+ FG K L L + GL RL +GS ++D NY
Sbjct: 121 DETKLVDTLGKFPLPLEVIPFGSGKLLQRLADE----GLKPAYRLNEDGSK-ALTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P +++ L G++EHGLF+++V ++GT+ G
Sbjct: 176 IIDLHLGKIEHPHLLAEWLNKQVGIVEHGLFLDLVKTVVVGTTHG 220
>gi|262170574|ref|ZP_06038252.1| ribose 5-phosphate isomerase A [Vibrio mimicus MB-451]
gi|261891650|gb|EEY37636.1| ribose 5-phosphate isomerase A [Vibrio mimicus MB-451]
Length = 218
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-SIKEEIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DVS +D+ +DG DEI+ + +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNDVSELDIYVDGADEINPKRDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I P+ + ++ IPGV+ GLF + D I GT G +
Sbjct: 169 LDVYNMKITHPKDLETKINGIPGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|254415860|ref|ZP_05029617.1| ribose 5-phosphate isomerase A [Microcoleus chthonoplastes PCC
7420]
gi|196177287|gb|EDX72294.1| ribose 5-phosphate isomerase A [Microcoleus chthonoplastes PCC
7420]
Length = 236
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 124/229 (54%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A Q V G +G+GTGST + + D+I G ++ IP+S E K
Sbjct: 11 MKQEVGKAAAQRVQSGTIVGLGTGSTTAYAIQYIGDRIKKGDLKDIKGIPTSFQAEVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H IPL S + V +D++IDG DE+D + LIKG G A REK++ A +FIV+ D K
Sbjct: 71 EHGIPLTSLDAVDHIDVAIDGADEVDPQKNLIKGGGAAHTREKVVDSLADQFIVVVDSGK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V+ LP+E+ + A+++ G ELR+ +G V+D GN ++D
Sbjct: 131 LVERLGSTFKLPVEVIPMAYAPVMRAIEK----LGGKPELRMGVKKAGPVVTDQGNMVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I +P + + NIPGV+E+GLF+ + + ++G DG+ LV +
Sbjct: 187 VTFDSIDNPGELEKTINNIPGVLENGLFVGVANVVLVGEVKDGQPLVRE 235
>gi|166713285|ref|ZP_02244492.1| ribose-5-phosphate isomerase A [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 215
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L +PGV+ GLF D I+G
Sbjct: 172 NLRITDPVALERSLNQLPGVVCVGLFARRPADVVIVGGE 210
>gi|313609629|gb|EFR85142.1| ribose 5-phosphate isomerase A [Listeria monocytogenes FSL F2-208]
Length = 223
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A +A +++ DGM +G+GTGST + L + NG + + +S T
Sbjct: 1 MNQ---KKIAGEKACEWIEDGMVVGLGTGSTVYYTIEKLGQMVNNGLHITGVATSEETTK 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I +
Sbjct: 58 QAEKLGIPLKSLNDVTEIDVTIDGADEIDTNFQGIKGGGGALLREKMVASASLKNIWVVS 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K V LG LP+E+ FG + L + L +++ ++V++ GNYI
Sbjct: 118 EEKLVRTLGEFPLPLEVIPFGWKQIERTLAKEQIQTNLR-----KQSNGEVYVTNNGNYI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D D ++ +L IPGV+EHGLF++ VD I G ++GE +++K
Sbjct: 173 LDIVNQSFTDAEMWQEKLAQIPGVVEHGLFLDYVDVIICGKANGETEIIKK 223
>gi|148909817|gb|ABR17995.1| unknown [Picea sitchensis]
Length = 310
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 8/231 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
+KR A+RA++ V GM +G+GTGSTA + L I G V + +S +
Sbjct: 64 QNTLKRAVAKRAVELVKPGMVIGLGTGSTASLAIEELGKLIQQGKLKDVVGVGTSYQSRV 123
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + DV +D++ DG DE+D + ++KG G A K+I A + +++ D
Sbjct: 124 LARQFGVKTVDLNDVIHIDIAFDGADEVDPSMNILKGGGAAHTMGKVIDTMAKKSVILVD 183
Query: 121 ESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+SK V + +P+E+ ++ L G E+R G ++D GN
Sbjct: 184 QSKVVFELGQIFPVPVEVLPPAISPVLRQ----LVALGGVPEIRSALRKDGPVITDFGNM 239
Query: 180 IVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+VD F I DP + + IPGV+E+GL + ++ T DG+ + +
Sbjct: 240 VVDVSFPEGIKDPAALEKRIKLIPGVVENGLVTGVASSVLVATQDGDDITI 290
>gi|89069151|ref|ZP_01156524.1| ribose 5-phosphate isomerase [Oceanicola granulosus HTCC2516]
gi|89045324|gb|EAR51390.1| ribose 5-phosphate isomerase [Oceanicola granulosus HTCC2516]
Length = 262
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 126/217 (58%), Gaps = 2/217 (0%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPED 74
YV DGM +G+GTGSTA + L + + G R+ +P+S T + I + S ++
Sbjct: 21 DYVEDGMRVGLGTGSTAAWLVKCLGEMVREDGLRLTGVPTSSRTAALAREVGIKVVSLDE 80
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+DL+IDG DE DS L LIKG GGALL+EKI+A A+ + +VI D SK+VD LG LP
Sbjct: 81 ARWLDLTIDGADEYDSNLNLIKGGGGALLQEKIVATASDQMVVIADISKQVDTLGAFPLP 140
Query: 135 IEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQI 193
+E+ FG T ++E L + LR NG +V+D GNYI+D I + +
Sbjct: 141 VEVIPFGWQTTKVLIEETLIGLDVLGRDTSLRLNGERPYVTDEGNYILDLHLNRIGNARQ 200
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+S L IPGV+E+GLFI++ D +IG DG V
Sbjct: 201 LSLVLNQIPGVVENGLFIDVCDAVVIGYGDGRVEVRD 237
>gi|260099879|pdb|3ENQ|A Chain A, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase A From Vibrio Vulnificus Yj016
gi|260099880|pdb|3ENQ|B Chain B, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase A From Vibrio Vulnificus Yj016
gi|260099881|pdb|3ENV|A Chain A, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
gi|260099882|pdb|3ENV|B Chain B, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
gi|260099883|pdb|3ENW|A Chain A, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
gi|260099884|pdb|3ENW|B Chain B, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
Length = 235
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + SS +
Sbjct: 18 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALGTMSEE--IKGAVSSSVASTE 75
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V+S+D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 76 KLEALGIKIFDCNEVASLDIYVDGADEINADREMIKGGGAALTREKIVAAIADKFICIVD 135
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 136 GTKAVDVLGTFPLPVEVIPMARSYVARQ----LVKLGGDPCYREG------VITDNGNVI 185
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ IPGV+ GLF + D I GT +G +
Sbjct: 186 LDVYGMKITNPKQLEDQINAIPGVVTVGLFAHRGADVVITGTPEGAKI 233
>gi|29374843|ref|NP_813996.1| ribose-5-phosphate isomerase A [Enterococcus faecalis V583]
gi|227555845|ref|ZP_03985892.1| ribose-5-phosphate isomerase A [Enterococcus faecalis HH22]
gi|256618389|ref|ZP_05475235.1| ribose-5-phosphate isomerase A [Enterococcus faecalis ATCC 4200]
gi|256960677|ref|ZP_05564848.1| ribose-5-phosphate isomerase A [Enterococcus faecalis Merz96]
gi|256964124|ref|ZP_05568295.1| ribose-5-phosphate isomerase A [Enterococcus faecalis HIP11704]
gi|257081489|ref|ZP_05575850.1| ribose-5-phosphate isomerase A [Enterococcus faecalis E1Sol]
gi|257087964|ref|ZP_05582325.1| ribose-5-phosphate isomerase A [Enterococcus faecalis D6]
gi|257417568|ref|ZP_05594562.1| ribose-5-phosphate isomerase A [Enterococcus faecalis AR01/DG]
gi|257418707|ref|ZP_05595701.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T11]
gi|293382767|ref|ZP_06628692.1| ribose 5-phosphate isomerase A [Enterococcus faecalis R712]
gi|293388050|ref|ZP_06632578.1| ribose 5-phosphate isomerase A [Enterococcus faecalis S613]
gi|307274162|ref|ZP_07555370.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0855]
gi|307276387|ref|ZP_07557510.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX2134]
gi|312908662|ref|ZP_07767604.1| ribose 5-phosphate isomerase A [Enterococcus faecalis DAPTO 512]
gi|312909190|ref|ZP_07768047.1| ribose 5-phosphate isomerase A [Enterococcus faecalis DAPTO 516]
gi|41017702|sp|Q839H2|RPIA_ENTFA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|29342301|gb|AAO80067.1| ribose 5-phosphate isomerase A [Enterococcus faecalis V583]
gi|227175012|gb|EEI55984.1| ribose-5-phosphate isomerase A [Enterococcus faecalis HH22]
gi|256597916|gb|EEU17092.1| ribose-5-phosphate isomerase A [Enterococcus faecalis ATCC 4200]
gi|256951173|gb|EEU67805.1| ribose-5-phosphate isomerase A [Enterococcus faecalis Merz96]
gi|256954620|gb|EEU71252.1| ribose-5-phosphate isomerase A [Enterococcus faecalis HIP11704]
gi|256989519|gb|EEU76821.1| ribose-5-phosphate isomerase A [Enterococcus faecalis E1Sol]
gi|256995994|gb|EEU83296.1| ribose-5-phosphate isomerase A [Enterococcus faecalis D6]
gi|257159396|gb|EEU89356.1| ribose-5-phosphate isomerase A [Enterococcus faecalis ARO1/DG]
gi|257160535|gb|EEU90495.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T11]
gi|291079927|gb|EFE17291.1| ribose 5-phosphate isomerase A [Enterococcus faecalis R712]
gi|291082501|gb|EFE19464.1| ribose 5-phosphate isomerase A [Enterococcus faecalis S613]
gi|306506867|gb|EFM76014.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX2134]
gi|306509124|gb|EFM78186.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0855]
gi|310625449|gb|EFQ08732.1| ribose 5-phosphate isomerase A [Enterococcus faecalis DAPTO 512]
gi|311290432|gb|EFQ68988.1| ribose 5-phosphate isomerase A [Enterococcus faecalis DAPTO 516]
gi|315026844|gb|EFT38776.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX2137]
gi|315151062|gb|EFT95078.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0012]
gi|315172703|gb|EFU16720.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX1346]
gi|315573505|gb|EFU85696.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0309B]
gi|315582147|gb|EFU94338.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0309A]
Length = 226
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|290893467|ref|ZP_06556451.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL J2-071]
gi|290556968|gb|EFD90498.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL J2-071]
Length = 223
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 131/231 (56%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A +A +++ DGM +G+GTGST + L + NG + + +S T
Sbjct: 1 MNQ---KKLAGEKACEWIEDGMVVGLGTGSTVYYTIEKLGQMVNNGLHITGVATSDETTK 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I +
Sbjct: 58 QAEKLGIPLKALNDVTEIDVTIDGADEIDTNFQGIKGGGGALLREKMVASASLKNIWVVG 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K V LG+ LP+E+ FG + L + L +++ ++V++ GNYI
Sbjct: 118 EEKLVRTLGKFPLPLEVIPFGWKQIERTLAKEQIQTNLR-----KQSNGEVYVTNNGNYI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D D ++ +L IPGV+EHGLF++ VD I G ++GE +++K
Sbjct: 173 LDIVNQSFTDAEMWQEKLAQIPGVVEHGLFLDYVDVIICGKANGETEIIKK 223
>gi|84622680|ref|YP_450052.1| ribose-5-phosphate isomerase A [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|123725579|sp|Q2P6P9|RPIA_XANOM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|84366620|dbj|BAE67778.1| ribose-5-phosphate isomerase A [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 215
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-HIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 NLQITDPVALERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|325927881|ref|ZP_08189105.1| ribose-5-phosphate isomerase [Xanthomonas perforans 91-118]
gi|325541721|gb|EGD13239.1| ribose-5-phosphate isomerase [Xanthomonas perforans 91-118]
Length = 215
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 HLQITDPVGLERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|84489794|ref|YP_448026.1| ribose-5-phosphate isomerase A [Methanosphaera stadtmanae DSM 3091]
gi|84373113|gb|ABC57383.1| RpiA [Methanosphaera stadtmanae DSM 3091]
Length = 231
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 74/221 (33%), Positives = 119/221 (53%), Gaps = 6/221 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
+ +K N ++A + DG +G+GTGST F+ L ++I + IP+S +
Sbjct: 3 NMDILKDNVGKKAADLIKDGQIVGLGTGSTTHYFIRYLGERIKNEELNILGIPTSYQSLI 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + ++ +D+++DG DE++ L LIKG G A EK++ +A +F+VI D
Sbjct: 63 KAREAGINTTTLDEYD-IDIAVDGADEVNPTLDLIKGGGAAHTLEKLVDSSAKKFVVIVD 121
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V+ LG+ +P+EI L +K+ G ELR+ G ++D GN+I
Sbjct: 122 ESKVVEELGKFPVPLEIIPEA----LRVVKDTLVDLGGKPELRMGIQKDGPVITDNGNFI 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
+D F I +P + EL IPGV+E+G+F + D IIG
Sbjct: 178 LDTKFDKIRNPHKLEKELNIIPGVLENGIFAGLADKVIIGK 218
>gi|294791458|ref|ZP_06756615.1| ribose 5-phosphate isomerase A [Scardovia inopinata F0304]
gi|294457929|gb|EFG26283.1| ribose 5-phosphate isomerase A [Scardovia inopinata F0304]
Length = 235
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 9/234 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSR 56
MD ++K+ A A + V DGM G+GTGST + + L + G + + +SR
Sbjct: 2 MDKETQDKLKKAAGIEAAKLVTDGMIAGLGTGSTVRFLVDELGRRTQEEGLKFTGVTTSR 61
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + + +DV +D++IDG DE+D IKG G ALL EKI+A + + +
Sbjct: 62 RTQEQAESYGIKIVNIDDVDRIDVTIDGADEVDKNFDGIKGGGAALLWEKIVAINSHKIV 121
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + ++ G LRL + GS ++D
Sbjct: 122 WIVDESKVVDTIGKFPLPVEVIPFGAGHVVKHFEDK----GYKPVLRLNQQGS-PVLTDE 176
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
NY+VD G I PQ ++ +L GV+EHGLF+NMVD I+G G ++
Sbjct: 177 KNYVVDLHLGQIDAPQELAQDLITTVGVVEHGLFLNMVDTVIVGDPHGPRILTN 230
>gi|78049084|ref|YP_365259.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123757368|sp|Q3BPQ4|RPIA_XANC5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|78037514|emb|CAJ25259.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 215
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H + + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGVEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 HLQITDPVGLERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|152985055|ref|YP_001345817.1| ribose-5-phosphate isomerase A [Pseudomonas aeruginosa PA7]
gi|166200578|sp|A6UYD2|RPIA_PSEA7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150960213|gb|ABR82238.1| ribose 5-phosphate isomerase A [Pseudomonas aeruginosa PA7]
Length = 223
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ Q+K+ A+ A+ +++ +G+GTGSTA F+ LA A + SS
Sbjct: 1 MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAE--FDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE + RL LIKG G AL REKI+A A FI
Sbjct: 59 ATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVARTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG+ LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPILGQFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I P + ++ I GV+ +GLF D ++GT+DG +
Sbjct: 169 GNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVQTL 221
>gi|330446916|ref|ZP_08310567.1| ribose 5-phosphate isomerase A [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491107|dbj|GAA05064.1| ribose 5-phosphate isomerase A [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 219
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVKKGTIVGVGTGSTVNHFIDAL-ETRKEEIKGAVSSSIASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
++ I + +VSS+D+ +DG DEI++ +IKG G AL REKI+A A F+ I D
Sbjct: 60 LEQL-GIKVFDANEVSSLDIYVDGADEINADYDMIKGGGAALTREKIVAAIAKTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K+VD LG+ LP+E+ + G + R ++D GN I
Sbjct: 119 DTKQVDVLGQFPLPVEVIPMARSYIGRE----LVKLGGDPVYRQG------VITDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ +PGV+ GLF + D ++G DG
Sbjct: 169 LDVYNMQITNPKEMEDKINALPGVVTVGLFAHRGADVLLVGAPDGVKK 216
>gi|17228383|ref|NP_484931.1| ribose-5-phosphate isomerase A [Nostoc sp. PCC 7120]
gi|30173352|sp|Q8YYG2|RPIA_ANASP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|17130233|dbj|BAB72845.1| ribose 5-phosphate isomerase [Nostoc sp. PCC 7120]
Length = 236
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 128/228 (56%), Gaps = 8/228 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L D++ +G + IP+S +E K
Sbjct: 11 MKQEVGKAAAALVKSGSIVGLGTGSTTAYTIQYLGDRLKSGELTDIVGIPTSFQSEVLSK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + V +D++IDG DE+D LIKG G A REK++ + A++FIV+ D K
Sbjct: 71 QYGVPLTTLDAVDHIDIAIDGADEVDPHKNLIKGGGAAHTREKVVDYLANQFIVVVDSGK 130
Query: 124 RVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD LG +P+E+ + +A+K+ G ELR+ +G ++D GN+++D
Sbjct: 131 LVDRLGSVFAVPVEVIPMAITPVTNAIKQ----LGGKPELRMGVKKAGPVITDQGNFVLD 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVL 229
F I DP + L NIPGV+E+G+F+N D ++G DG+ LV
Sbjct: 187 VRFDSIDDPVNLEKILNNIPGVLENGIFVNCADIVLVGEVKDGQPLVR 234
>gi|254508751|ref|ZP_05120864.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus 16]
gi|219548330|gb|EED25342.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus 16]
Length = 220
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + V S +T+
Sbjct: 3 MTQDEMKKEAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKEEIKGAVSSSEASTQR 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V+ +D+ +DG DEI++ +IKG G AL REKI+A + +FI I D
Sbjct: 62 L-KELEIEVFDCNEVAGLDIYVDGADEINANREMIKGGGAALTREKIVAAISDKFICIVD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG LP+E+ + G + R ++D GN I
Sbjct: 121 DTKAVDVLGEFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------CITDNGNVI 170
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ +PGV+ GLF + D I GT G +
Sbjct: 171 LDVYGMQITNPKELEDKINALPGVVTVGLFAHRGADVVITGTQQGAKI 218
>gi|315147179|gb|EFT91195.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX4244]
Length = 226
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 128/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGMT+G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMTVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|289668028|ref|ZP_06489103.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 210
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGT 221
I DP + L IPGV+ GLF D IIG
Sbjct: 172 NLQITDPVALERSLNQIPGVVCVGLFARRPADVVIIGG 209
>gi|71909172|ref|YP_286759.1| ribose-5-phosphate isomerase A [Dechloromonas aromatica RCB]
gi|71848793|gb|AAZ48289.1| ribose-5-phosphate isomerase [Dechloromonas aromatica RCB]
Length = 232
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 17/234 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ A+ A YV G +G+GTGSTA F+ LA + + ++ + SS
Sbjct: 11 MTQDELKQAVAQAAADYVAQTAPAGSIIGVGTGSTANFFIDALAP-LKDKYK-GAVASSE 68
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I ++ DV + + +DG DEID+ L +IKG GGAL REKI+A A F+
Sbjct: 69 ATRKRLEGHGIAVYDLNDVEDIPVYVDGADEIDAGLNMIKGGGGALTREKIVAAVAREFV 128
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD +G+ LP+E+ + G LR FV+D
Sbjct: 129 CICDGSKLVDTMGKFPLPVEVIPMARAHVARE----LAKLGGTPVLREG------FVTDN 178
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
GN I+D I DP+ + ++ I GV+ +GLF + ++GT+DG +
Sbjct: 179 GNIILDVKGLSITDPKGLEAQINQITGVVTNGLFAVRPANLLLLGTADGVRTIR 232
>gi|302879703|ref|YP_003848267.1| ribose 5-phosphate isomerase [Gallionella capsiferriformans ES-2]
gi|302582492|gb|ADL56503.1| ribose 5-phosphate isomerase [Gallionella capsiferriformans ES-2]
Length = 221
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ +KR A AIQYV +G+GTGSTA F+ LA KI N R V S + +
Sbjct: 2 MNQDDLKRAVALAAIQYVPADCIVGVGTGSTANFFIDELA-KIKNKIRGAVASSEASAKR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + S + ++++ +DG DEI + ++KG GGAL REKI+A A+ +FI + D
Sbjct: 61 L-QGHGIEVMSLNEAGALEVYVDGADEITRHMHMLKGGGGALTREKIVAGASRKFICLCD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG+ LPIE+ + G LR F +D GN I
Sbjct: 120 ASKLVDVLGKFPLPIEVIPMARSSVARQ----LVALGGQPMLREG------FTTDNGNII 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I +P + EL +I GV+ +GLF D ++GT+DG
Sbjct: 170 IDVHGLKIMNPVELESELDHIAGVVTNGLFARRAADVLLLGTADGVKT 217
>gi|114578714|ref|XP_525809.2| PREDICTED: ribose-5-phosphate isomerase [Pan troglodytes]
gi|297266497|ref|XP_001094618.2| PREDICTED: ribose-5-phosphate isomerase-like [Macaca mulatta]
Length = 311
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 134
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 135 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 194
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 195 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQ---KFGGVVELRMAVNKAGPVVT 251
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 252 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 308
>gi|209522681|ref|ZP_03271239.1| ribose 5-phosphate isomerase [Arthrospira maxima CS-328]
gi|209496730|gb|EDZ97027.1| ribose 5-phosphate isomerase [Arthrospira maxima CS-328]
Length = 237
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L +++ +G ++ +P+S K
Sbjct: 11 MKQQVGKAAADRVKSGSIVGLGTGSTTAYTIQFLGERLKSGEIKDIKGVPTSFQASVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + +++ +D++IDG DE+D LIKG G A REKI+ A +FIV+ D SK
Sbjct: 71 EYGIPLTTLDEIDHIDIAIDGADEVDPHKNLIKGGGAAHTREKIVDCLADQFIVVVDGSK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ + ++A+ + G LR+ +G ++D GN ++D
Sbjct: 131 IVDRLGSTFLLPVEVMPMAMTPVMAAITK----LGGKPTLRMGVKKAGPVITDQGNMVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I +P + L NIPGV+E+GLF+ + D ++G DG+ +V +
Sbjct: 187 VKFDAIDNPAELEKTLNNIPGVLENGLFVGVADVILVGEIKDGQPVVRE 235
>gi|75910688|ref|YP_324984.1| ribose-5-phosphate isomerase A [Anabaena variabilis ATCC 29413]
gi|123608103|sp|Q3M4J7|RPIA_ANAVT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|75704413|gb|ABA24089.1| ribose-5-phosphate isomerase [Anabaena variabilis ATCC 29413]
Length = 236
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 130/229 (56%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L D++ +G + IP+S +E K
Sbjct: 11 MKQEVGKAAAALVKSGSIVGLGTGSTTAYTIQYLGDRLKSGELTDIVGIPTSFQSEVLSK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + V +D++IDG DE+D + LIKG G A REK++ + A++FIV+ D K
Sbjct: 71 QYGVPLTTLDAVDHIDIAIDGADEVDPQKNLIKGGGAAHTREKVVDYLANQFIVVVDSGK 130
Query: 124 RVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD LG +P+E+ + +A+K+ G ELR+ +G ++D GN+++D
Sbjct: 131 LVDRLGSVFAVPVEVIPMAITPVTNAIKQ----LGGKPELRMGVKKAGPVITDQGNFVLD 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + L NIPGV+E+G+F+N D ++G DG+ LV Q
Sbjct: 187 VRFDSIDDPVNLEKILNNIPGVLENGIFVNCADIVLVGEVKDGQPLVRQ 235
>gi|296223314|ref|XP_002757567.1| PREDICTED: ribose-5-phosphate isomerase-like [Callithrix jacchus]
Length = 311
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 134
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 135 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 194
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 195 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQ---KFGGVVELRMAVNKAGPVVT 251
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 252 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 308
>gi|94536842|ref|NP_653164.2| ribose-5-phosphate isomerase [Homo sapiens]
gi|297667141|ref|XP_002811850.1| PREDICTED: ribose-5-phosphate isomerase-like [Pongo abelii]
gi|156637353|sp|P49247|RPIA_HUMAN RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=Phosphoriboisomerase
gi|114325416|gb|AAH15529.2| Ribose 5-phosphate isomerase A [Homo sapiens]
gi|119597472|gb|EAW77066.1| ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase),
isoform CRA_a [Homo sapiens]
Length = 311
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 134
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 135 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 194
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 195 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQ---KFGGVVELRMAVNKAGPVVT 251
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 252 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 308
>gi|116073737|ref|ZP_01470999.1| Ribose 5-phosphate isomerase [Synechococcus sp. RS9916]
gi|116069042|gb|EAU74794.1| Ribose 5-phosphate isomerase [Synechococcus sp. RS9916]
Length = 237
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 83/231 (35%), Positives = 128/231 (55%), Gaps = 9/231 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRN 57
MD QMK A A+ + DGM LG+G+GSTA + L K+A+G + + +S
Sbjct: 1 MDLQTQMKHAVAAAAVDQIKDGMVLGLGSGSTAALMIQGLGAKLASGELKDIVGVTTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
E +IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RF+V
Sbjct: 61 GEVLAAELNIPLLSLNAVDRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARAERFVV 120
Query: 118 IGDESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D +K VD L +LP+E+ +++ + G ELR+ + +G V+D
Sbjct: 121 VVDSTKLVDRLNLGFLLPVEVLPGAW----RQVQQQLAAMGGTAELRMAQRKAGPVVTDQ 176
Query: 177 GNYIVDAF-FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
GN ++D G I DP + + NIPGV+E+GLF+N+ D ++G +G+
Sbjct: 177 GNLVLDVKMNGGIADPAALELAINNIPGVLENGLFVNLADEVLVGEVNGDV 227
>gi|325922299|ref|ZP_08184080.1| ribose-5-phosphate isomerase [Xanthomonas gardneri ATCC 19865]
gi|325547252|gb|EGD18325.1| ribose-5-phosphate isomerase [Xanthomonas gardneri ATCC 19865]
Length = 215
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I++ + V S +++ K
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RISHRIKGAVSSSEQSSAQL-KR 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIIDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LP+E+ + + + G R ++D GN ++D
Sbjct: 121 VPVLGTFPLPVEVIPMARSLVARQI---LALTGGQPVWRDN------VITDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 NLQITDPVALERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|122879072|ref|YP_199766.6| ribose-5-phosphate isomerase A [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188578278|ref|YP_001915207.1| ribose-5-phosphate isomerase A [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|67461248|sp|Q5H3U0|RPIA_XANOR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238689454|sp|B2SLM6|RPIA_XANOP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|188522730|gb|ACD60675.1| ribose 5-phosphate isomerase A [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 215
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-HIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R + ++D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWR------DVVLTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 NLQITDPVALERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|118594110|ref|ZP_01551457.1| ribose-5-phosphate isomerase A [Methylophilales bacterium HTCC2181]
gi|118439888|gb|EAV46515.1| ribose-5-phosphate isomerase A [Methylophilales bacterium HTCC2181]
Length = 219
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A+ AI+YV G +G+GTGSTA F+ LA+ + + + SS T
Sbjct: 4 SQDELKKQVAKAAIEYVESG-VIGVGTGSTANYFIDYLAE-VKHKID-GAVASSEATAER 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ H I + V +D+ +DG DEI + ++KG GGAL REKI+A A +FI I DE
Sbjct: 61 LRKHGIEVFDLNSVDGMDIYVDGADEITEHMHMLKGGGGALTREKIVAANAKKFICICDE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + S G +LR F +D GN I+
Sbjct: 121 SKFVPTLGKFPLPVEVLPMARSYVARQ----LSALGGQPQLRD-------FTTDNGNIIL 169
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
D I DP + I GV+ +GLF D ++ T G +
Sbjct: 170 DIHGMNIVDPIDTEARINQIVGVVTNGLFAKRAADILLLATDSGVKTL 217
>gi|114707094|ref|ZP_01439993.1| ribose 5-phosphate isomerase protein [Fulvimarina pelagi HTCC2506]
gi|114537644|gb|EAU40769.1| ribose 5-phosphate isomerase protein [Fulvimarina pelagi HTCC2506]
Length = 231
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 152/227 (66%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
DA +KR AA A + +G+ +G+GTGSTA+EF+ +LA+ + F + + +S TE
Sbjct: 3 DAKSLKRKAAEAAFAELDEGLNIGIGTGSTAEEFVRVLAEHVEADFEMTGVTTSERTETL 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
C+ +P + +++ +D+++DG DEID LRLIKG GGALLREKI+A ++++ IVI D
Sbjct: 63 CRELGVPTKTLDEIPILDVTVDGADEIDGDLRLIKGGGGALLREKIVAFSSAKMIVIADA 122
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LPIE++ FG+ T A++ VA L ++ LR+NG F++DGG+ I+
Sbjct: 123 SKKVETLGAFPLPIEVNGFGLMSTFMAIRRVAETLDLTGDIVLRKNGDQPFITDGGHLIL 182
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
DA FG IPDP+ +S L +IPG++EHGLFI + AI+ + DG +
Sbjct: 183 DASFGRIPDPEALSAALRSIPGIVEHGLFIKLASVAILASEDGIERL 229
>gi|228477425|ref|ZP_04062061.1| ribose 5-phosphate isomerase A [Streptococcus salivarius SK126]
gi|228250860|gb|EEK10048.1| ribose 5-phosphate isomerase A [Streptococcus salivarius SK126]
Length = 226
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 128/229 (55%), Gaps = 6/229 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +YV DGM +G+GTGSTA F+ + +I G V + +S T
Sbjct: 2 EELKKIAGVTAAKYVEDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSSQTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +D+ S+D+++DG DE+D +L IKG GGALL EKI+A +I + DES
Sbjct: 62 EGLGIPLKAVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ + G RL G FV+D NYI+D
Sbjct: 122 KMVDQLGAFKLPVEVVQYGADRLYRVFESK----GYKPSFRLTEQGD-RFVTDMKNYIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV++HGLF MV+ I+ DG +V K
Sbjct: 177 LDLGKIENPVALGEELKAMTGVVDHGLFNGMVNKVIVAGKDGVKVVEVK 225
>gi|119475437|ref|ZP_01615790.1| ribose 5-phosphate isomerase A [marine gamma proteobacterium
HTCC2143]
gi|119451640|gb|EAW32873.1| ribose 5-phosphate isomerase A [marine gamma proteobacterium
HTCC2143]
Length = 224
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 77/235 (32%), Positives = 112/235 (47%), Gaps = 17/235 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M +K+ AR A+ Y+ +G+GTGSTA F+ LA+ I + V S
Sbjct: 1 MTQDDLKKAVARAALDYIKPKIENDSVIGIGTGSTANYFIDYLAE-IKSHINATVASSEA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + K H IP+ V+ + + +DG DE D L LIKG G AL REKI+A +A F+
Sbjct: 60 SADRLRK-HGIPVFELTSVNEITVYVDGADESDPNLALIKGGGAALTREKIVAASAREFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V LG LP+E+ + G + R V+D
Sbjct: 119 CIADESKCVAQLGNFPLPVEVIPMARSFVARE----LVKMGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
GN I+D F IP+P + NI GV+ +G+F D ++ TS+G + +
Sbjct: 169 GNIIIDVFNFMIPNPIETEQHINNITGVVTNGIFAQRPADILLVATSEGIKTLHK 223
>gi|229550561|ref|ZP_04439286.1| ribose-5-phosphate isomerase A [Enterococcus faecalis ATCC 29200]
gi|229304280|gb|EEN70276.1| ribose-5-phosphate isomerase A [Enterococcus faecalis ATCC 29200]
Length = 226
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPALRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|304314749|ref|YP_003849896.1| ribose 5-phosphate isomerase [Methanothermobacter marburgensis str.
Marburg]
gi|302588208|gb|ADL58583.1| ribose 5-phosphate isomerase [Methanothermobacter marburgensis str.
Marburg]
Length = 225
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 125/229 (54%), Gaps = 6/229 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFC 62
+ +KR AA RA++ + DG +G+GTGST F++ L ++ V +P+S +
Sbjct: 1 MDLKRMAALRAVEEIRDGDIVGLGTGSTTHHFIVELGRRVREEELEVMGVPTSYQSMFLA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
I + S + VD+++DG DE+D +L LIKG G A EKI+ +A RFIVI DES
Sbjct: 61 AESGIGVTSLAEHD-VDVAVDGADEVDPQLNLIKGGGAAHTLEKIVDSSAGRFIVIVDES 119
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ + G LR G V+D GN+++D
Sbjct: 120 KLVDRLGAFPLPVEVIPAACRPVMIR----LESMGATVTLRSCEGKDGPVVTDNGNFVLD 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
A FG I DP + +L +IPGV+E+G+F + D I+GT+ G ++ K
Sbjct: 176 ASFGAIDDPAGLEVDLNSIPGVVENGIFAGLADMVIVGTAGGVEVLRPK 224
>gi|251794012|ref|YP_003008744.1| ribose-5-phosphate isomerase A [Aggregatibacter aphrophilus NJ8700]
gi|247535411|gb|ACS98657.1| ribose 5-phosphate isomerase A [Aggregatibacter aphrophilus NJ8700]
Length = 218
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 120/230 (52%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AA+ A+Q+V M +G+G+GST F+ L + +S+N+E
Sbjct: 1 MDQLEMKKIAAQAALQFVKPEMIVGVGSGSTVNCFIEALGSM--KDEIKGAVAASKNSEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + S DV+S+D+ +DG DEI+ + +IKG G AL REKI+A A FI I D
Sbjct: 59 LLKKHGIEVFSANDVTSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKNFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVARK----LVALGGAPEYREG------VVTDNGNI 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL NI GV+ +G+F + + I+GT +G ++
Sbjct: 169 ILDVHNFEILNPVEMEKELNNIAGVVTNGIFALRPANTVIVGTPNGAKII 218
>gi|261855310|ref|YP_003262593.1| ribose 5-phosphate isomerase [Halothiobacillus neapolitanus c2]
gi|261835779|gb|ACX95546.1| ribose 5-phosphate isomerase [Halothiobacillus neapolitanus c2]
Length = 220
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 83/230 (36%), Positives = 118/230 (51%), Gaps = 14/230 (6%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M Q+K+ AA+ A+QYV G +G+GTGST F+ LA I + V S +T+
Sbjct: 1 MTPQDQLKQQAAKAALQYVQTGSIVGVGTGSTVNFFIDELA-TIKHKIEGAVSSSEASTK 59
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
H I + V + + IDG DE ++ L+LIKG GGAL REKIIAH A +F+ +
Sbjct: 60 RLRA-HGIEVFDLNGVGDIPVYIDGADETNANLQLIKGGGGALTREKIIAHMAKKFVCVA 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K V LG+ LPIE+ + L + G R FV+D GN
Sbjct: 119 DETKLVPRLGKFPLPIEVIPMARSMVARELVKR----GGQPVYRDG------FVTDNGNQ 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL NIPG++ GLF + D I+ ++G +
Sbjct: 169 ILDIHNMDIMEPAKLEAELNNIPGIVTVGLFALRPADVLILAAAEGVRTL 218
>gi|21109766|gb|AAM38254.1| ribose-5-phosphate isomerase A [Xanthomonas axonopodis pv. citri
str. 306]
Length = 230
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 18 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 75
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 76 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 135
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 136 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 186
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
+ DP + L IPGV+ GLF D I+G
Sbjct: 187 HLQVTDPVGLERSLNQIPGVVCVGLFARRPADVVIVGGE 225
>gi|308804409|ref|XP_003079517.1| chloroplast ribose-5-phosphate isomerase (ISS) [Ostreococcus tauri]
gi|116057972|emb|CAL54175.1| chloroplast ribose-5-phosphate isomerase (ISS) [Ostreococcus tauri]
Length = 298
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 11/235 (4%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRN 57
M ++K+ +++ +V GM +G+GTGSTA + + K+A+G V IP+S
Sbjct: 40 MTQDELKKLVGYKSVDDHVESGMVVGLGTGSTAYFAVERVGQKLASGELKNVICIPTSER 99
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
T + IPL + + S +D++IDG DE+D L L+KG GGALLREK++ A +F+V
Sbjct: 100 TREQAESLKIPLCTLNEKSELDVAIDGADEVDPALALVKGGGGALLREKMVEVMAKKFVV 159
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR------NGSG 170
I DESK LP+EI F TL + ++ + G LR+ +G
Sbjct: 160 IVDESKLCKGLGPGFPLPVEITPFCHMHTLRTIAKLPALAGCEAILRMGSSSNNKIDGDN 219
Query: 171 LFVSDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+ V+D GNYIVD F I DP + +L N GV++HGLF++M I+ SDG
Sbjct: 220 IAVTDNGNYIVDLHFKSPIKDPVAAASQLKNCVGVVDHGLFVDMAYQVIVAGSDG 274
>gi|51595665|ref|YP_069856.1| ribose 5-phosphate isomerase [Yersinia pseudotuberculosis IP 32953]
gi|108807006|ref|YP_650922.1| putative ribose 5-phosphate isomerase [Yersinia pestis Antiqua]
gi|108812847|ref|YP_648614.1| ribose 5-phosphate isomerase [Yersinia pestis Nepal516]
gi|145599676|ref|YP_001163752.1| ribose 5-phosphate isomerase [Yersinia pestis Pestoides F]
gi|149366728|ref|ZP_01888762.1| putative ribose 5-phosphate isomerase [Yersinia pestis CA88-4125]
gi|165924578|ref|ZP_02220410.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936142|ref|ZP_02224711.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009773|ref|ZP_02230671.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211336|ref|ZP_02237371.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400391|ref|ZP_02305904.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419880|ref|ZP_02311633.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167423909|ref|ZP_02315662.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469015|ref|ZP_02333719.1| ribose 5-phosphate isomerase [Yersinia pestis FV-1]
gi|218928443|ref|YP_002346318.1| putative ribose 5-phosphate isomerase [Yersinia pestis CO92]
gi|229841247|ref|ZP_04461406.1| putative ribose 5-phosphate isomerase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843350|ref|ZP_04463496.1| putative ribose 5-phosphate isomerase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894413|ref|ZP_04509596.1| putative ribose 5-phosphate isomerase [Yersinia pestis Pestoides A]
gi|229903272|ref|ZP_04518385.1| putative ribose 5-phosphate isomerase [Yersinia pestis Nepal516]
gi|270487071|ref|ZP_06204145.1| ribose 5-phosphate isomerase A [Yersinia pestis KIM D27]
gi|294503291|ref|YP_003567353.1| putative ribose 5-phosphate isomerase [Yersinia pestis Z176003]
gi|41017777|sp|Q8ZGJ9|RPIA2_YERPE RecName: Full=Ribose-5-phosphate isomerase A 2; AltName:
Full=Phosphoriboisomerase A 2; Short=PRI 2
gi|67461566|sp|Q66CS8|RPIA2_YERPS RecName: Full=Ribose-5-phosphate isomerase A 2; AltName:
Full=Phosphoriboisomerase A 2; Short=PRI 2
gi|51588947|emb|CAH20564.1| putative ribose 5-phosphate isomerase [Yersinia pseudotuberculosis
IP 32953]
gi|108776495|gb|ABG19014.1| ribose-5-phosphate isomerase [Yersinia pestis Nepal516]
gi|108778919|gb|ABG12977.1| ribose-5-phosphate isomerase [Yersinia pestis Antiqua]
gi|115347054|emb|CAL19946.1| putative ribose 5-phosphate isomerase [Yersinia pestis CO92]
gi|145211372|gb|ABP40779.1| ribose-5-phosphate isomerase [Yersinia pestis Pestoides F]
gi|149291102|gb|EDM41177.1| putative ribose 5-phosphate isomerase [Yersinia pestis CA88-4125]
gi|165915756|gb|EDR34364.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923638|gb|EDR40770.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991169|gb|EDR43470.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207107|gb|EDR51587.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962621|gb|EDR58642.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050340|gb|EDR61748.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056758|gb|EDR66521.1| ribose 5-phosphate isomerase A [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229679042|gb|EEO75145.1| putative ribose 5-phosphate isomerase [Yersinia pestis Nepal516]
gi|229689697|gb|EEO81758.1| putative ribose 5-phosphate isomerase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697613|gb|EEO87660.1| putative ribose 5-phosphate isomerase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703811|gb|EEO90827.1| putative ribose 5-phosphate isomerase [Yersinia pestis Pestoides A]
gi|262361329|gb|ACY58050.1| putative ribose 5-phosphate isomerase [Yersinia pestis D106004]
gi|262365133|gb|ACY61690.1| putative ribose 5-phosphate isomerase [Yersinia pestis D182038]
gi|270335575|gb|EFA46352.1| ribose 5-phosphate isomerase A [Yersinia pestis KIM D27]
gi|294353750|gb|ADE64091.1| putative ribose 5-phosphate isomerase [Yersinia pestis Z176003]
gi|320015860|gb|ADV99431.1| putative ribose 5-phosphate isomerase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 236
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 3/229 (1%)
Query: 3 ALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
KR AARR I +V DGMTLG+G+G+T+ F+ L +A G ++ +SR T
Sbjct: 5 QNDAKRAAARRVIQDFVFDGMTLGLGSGTTSHFFVRELGQHVAKGLQLTCTTTSRATSEV 64
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I L P +++ +DL+IDG DEID R +IKG G LL EKIIAHA+ R I I DE
Sbjct: 65 ARDVGIELSDPNEMNEIDLTIDGPDEIDRRFNMIKGGGACLLWEKIIAHASKRMICICDE 124
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYI 180
+K V+ LG+ LP+EI F +T ++ V + GL+ +RR G G ++D GN+I
Sbjct: 125 TKIVNCLGQFPLPVEIVPFAWKQTERRVERVLAEQGLHHVPIIRRMGGGHPVITDSGNFI 184
Query: 181 VDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D G I P+ + EL IPGV+E+GLF ++G DG V
Sbjct: 185 LDCHCGAIITAPEPLEIELNRIPGVVENGLFTREATGMVVGYFDGSSYV 233
>gi|237748773|ref|ZP_04579253.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes OXCC13]
gi|229380135|gb|EEO30226.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes OXCC13]
Length = 225
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 124/230 (53%), Gaps = 10/230 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K + AR AIQY+ +G +G+GTGSTA F+ LA +I N V + SSR T +
Sbjct: 1 MSQDDLKLSVARAAIQYIPEGKIIGVGTGSTANFFIDELA-RIKNRI-VGAVASSRATAD 58
Query: 61 FCKIHHIPLHSPEDVSS-VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
H I + D++ + + IDG DEI ++ +IKG GGAL REKIIA A+ +FI I
Sbjct: 59 RLASHGIKVFDLNDITEPLPVYIDGADEITAKGAMIKGGGGALTREKIIASASEKFICIA 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG+ LP+E+ + FG LR++ FV+D GN
Sbjct: 119 DESKLVDILGKFPLPVEVIPMASQLIARK----LAVFGGKPVLRMKEGK--PFVTDNGNV 172
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I DP + ++ NI GV+ GLF + ++G SDG +
Sbjct: 173 ILDVSGLQIKDPANLEEKINNIVGVVTVGLFARTGANLCLMGCSDGVKTL 222
>gi|37681034|ref|NP_935643.1| ribose-5-phosphate isomerase A [Vibrio vulnificus YJ016]
gi|37199784|dbj|BAC95614.1| ribose 5-phosphate isomerase [Vibrio vulnificus YJ016]
Length = 220
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + SS +
Sbjct: 3 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALGTMSEE--IKGAVSSSVASTE 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V+S+D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 61 KLEALGIKIFDCNEVASLDIYVDGADEINADREMIKGGGAALTREKIVAAIADKFICIVD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 121 GTKAVDVLGTFPLPVEVIPMARSYVARQ----LVKLGGDPCYREG------VITDNGNVI 170
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ IPGV+ GLF + D I GT +G +
Sbjct: 171 LDVYGMKITNPKQLEDQINAIPGVVTVGLFAHRGADVVITGTPEGAKI 218
>gi|41017629|sp|Q7MHL9|RPIA_VIBVY RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
Length = 218
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALGTMSEE--IKGAVSSSVASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V+S+D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 59 KLEALGIKIFDCNEVASLDIYVDGADEINADREMIKGGGAALTREKIVAAIADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGTFPLPVEVIPMARSYVARQ----LVKLGGDPCYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ IPGV+ GLF + D I GT +G +
Sbjct: 169 LDVYGMKITNPKQLEDQINAIPGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|312864844|ref|ZP_07725075.1| ribose 5-phosphate isomerase A [Streptococcus downei F0415]
gi|311099971|gb|EFQ58184.1| ribose 5-phosphate isomerase A [Streptococcus downei F0415]
Length = 228
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K A RA QYV DGM LG+GTGSTA F+ + ++ G +V + +S T
Sbjct: 5 DDLKEQAGIRAAQYVKDGMILGLGTGSTAYYFVAEIGRRVQEEGLQVVGVTTSSGTTAQA 64
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V +DL++DG DE+D IKG GGALL EKI+A +I + DES
Sbjct: 65 QSLGIPLKSVDEVDVIDLTVDGADEVDRNFNGIKGGGGALLMEKIVATPTKDYIWVVDES 124
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG LP+E+ Q+G + + + R+ FV+D NYI+D
Sbjct: 125 KLVKTLGAFKLPVEVVQYGAERLFRQFDQQGY------KPSFRQKDGKRFVTDMQNYIID 178
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G IPDP + EL ++ GV+EHGLF MV+ I+ DG VL+
Sbjct: 179 LDLGAIPDPVALGQELKSLTGVVEHGLFNGMVNKVIVAGQDG-VRVLE 225
>gi|227532879|ref|ZP_03962928.1| ribose-5-phosphate isomerase A [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227189484|gb|EEI69551.1| ribose-5-phosphate isomerase A [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 240
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 131/225 (58%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
MD ++K+ AA+RA ++V DGMT+G+GTGST + +A +I + + +S T
Sbjct: 12 MDQNKLKQEAAQRAAEFVEDGMTIGLGTGSTVVYLVEAIAQRIKDEHLNLTGVATSVRTR 71
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + ++V +DL+IDG DE+D + IKG G + L EKI+A +R I I
Sbjct: 72 KQAESLGIPMKALDEVGQIDLTIDGADEVDKHFQGIKGGGRSHLIEKIVAINTARNIWIV 131
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K VD LG+ LP+E+ FG K L L + GL RL +GS ++D NY
Sbjct: 132 DETKLVDTLGKFPLPLEVIPFGSGKLLQRLADE----GLKPAYRLNEDGSK-ALTDSKNY 186
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P +++ L G++EHGLF+++V ++GT+ G
Sbjct: 187 IIDLHLGKIEHPHLLAEWLNKQVGIVEHGLFLDLVKTVVVGTTHG 231
>gi|254419870|ref|ZP_05033594.1| ribose 5-phosphate isomerase A [Brevundimonas sp. BAL3]
gi|196186047|gb|EDX81023.1| ribose 5-phosphate isomerase A [Brevundimonas sp. BAL3]
Length = 227
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 3/228 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M LQ K+NA A +V GM +G+GTGSTA F+ LA + +G R +P+S T +
Sbjct: 1 MSDLQ-KKNAGEAAAAHVEAGMIVGLGTGSTAAWFVKALAARGLSGLR--CVPTSEKTAD 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + ED +DL++DG DE+ L LIKG G ALLREK++ A+SR IVI D
Sbjct: 58 LARELGLTLSTLEDTPRIDLTVDGADEVGPGLALIKGGGAALLREKLVWEASSRCIVIAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V LG LPIE+ FG T + + +V +N R+R+ GL +DGGN I
Sbjct: 118 AAKVVPVLGTFPLPIEVVAFGHKTTANRIADVLIDHDINSPARVRQADRGLVRTDGGNLI 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
DA I DP ++ +L I GV+EHGLF+++ D AIIGT G +
Sbjct: 178 YDAGCKAIHDPVRLADDLKLITGVVEHGLFLDLADLAIIGTDSGVETL 225
>gi|217964925|ref|YP_002350603.1| ribose 5-phosphate isomerase A [Listeria monocytogenes HCC23]
gi|217334195|gb|ACK39989.1| ribose 5-phosphate isomerase A [Listeria monocytogenes HCC23]
gi|307570516|emb|CAR83695.1| ribose 5-phosphate isomerase A [Listeria monocytogenes L99]
Length = 223
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A +A +++ DGM +G+GTGST + L + NG + + +S T
Sbjct: 1 MNQ---KKIAGEKACEWIEDGMVVGLGTGSTVYYTLEKLGQMVNNGLHITGVATSDETTK 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I +
Sbjct: 58 QAEKLGIPLKSLNDVTEIDVTIDGADEIDTNFQGIKGGGGALLREKMVASASLKNIWVVS 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K V LG+ LP+E+ FG + L + L +++ ++V++ GNYI
Sbjct: 118 EEKLVRTLGKFPLPLEVIPFGWKQIERTLAKEQIQTNLR-----KQSNGEVYVTNNGNYI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D D ++ +L IPGV+EHGLF++ VD I G ++GE +++K
Sbjct: 173 LDIVNQSFTDAEMWQEKLAQIPGVVEHGLFLDYVDVIICGKANGETEIIKK 223
>gi|322389429|ref|ZP_08062983.1| ribose 5-phosphate isomerase [Streptococcus parasanguinis ATCC 903]
gi|321143917|gb|EFX39341.1| ribose 5-phosphate isomerase [Streptococcus parasanguinis ATCC 903]
Length = 224
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 130/227 (57%), Gaps = 7/227 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+K +A ++V DGM +G+GTGSTA F+ L +I G ++ + +S T + +
Sbjct: 4 NLKEQVGIKAAEFVKDGMIVGLGTGSTAYYFVAELGRRIKEEGLQITAVTTSSVTYDQAE 63
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + +DV VD+++DG DE+D +L IKG GGALL EKI+A + I I DESK
Sbjct: 64 SLGIPLKAIDDVELVDVTVDGADEVDPQLNGIKGGGGALLMEKIVATNSKDCIWIVDESK 123
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+V LG LP+E+ Q+G ++ G + RL FV+D GN+I+D
Sbjct: 124 QVATLGAFKLPVEVVQYGAENLFRHFEQK----GYHPAFRLA--DDQRFVTDQGNFIIDL 177
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I D + ++ EL + GV+EHGLF+NM+ I+GT DG ++ +
Sbjct: 178 DLKVIEDAEALANELDHTVGVVEHGLFLNMISKVIVGTPDGPVIIEK 224
>gi|322372888|ref|ZP_08047424.1| ribose 5-phosphate isomerase A [Streptococcus sp. C150]
gi|321277930|gb|EFX54999.1| ribose 5-phosphate isomerase A [Streptococcus sp. C150]
Length = 226
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 130/229 (56%), Gaps = 6/229 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A ++V DGM +G+GTGSTA F+ + +I G V + +S T
Sbjct: 2 EELKKIAGVTAAKFVKDGMVVGLGTGSTAYFFVEEIGRRIKEEGLNVVGVTTSSQTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +D+ S+D+++DG DE+D +L IKG GGALL EKI+A +I + DES
Sbjct: 62 ESLGIPLKAVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ + G RL G FV+D N+I+D
Sbjct: 122 KMVDQLGAFKLPVEVVQYGADRLYRVFESK----GYKPSFRLTEEG-NRFVTDMKNFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P ++ EL ++ GV+EHGLF MV+ I+ DG +V K
Sbjct: 177 LDLGKIENPVVLGQELKSMTGVVEHGLFNGMVNKVIVAGKDGVKIVEVK 225
>gi|320155302|ref|YP_004187681.1| ribose 5-phosphate isomerase A [Vibrio vulnificus MO6-24/O]
gi|319930614|gb|ADV85478.1| ribose 5-phosphate isomerase A [Vibrio vulnificus MO6-24/O]
Length = 218
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALGTMSEE--IKGAVSSSIASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V+S+D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 59 KLEALGIKIFDCNEVASLDIYVDGADEINADREMIKGGGAALTREKIVAAIADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGTFPLPVEVIPMARSYVARQ----LVKLGGDPCYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ IPGV+ GLF + D I GT +G +
Sbjct: 169 LDVYGMKITNPKQLEDQINGIPGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|255971701|ref|ZP_05422287.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T1]
gi|255962719|gb|EET95195.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T1]
Length = 224
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 89/224 (39%), Positives = 126/224 (56%), Gaps = 6/224 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
MK+ A +YV DGM +G+GTGSTAK + + +I G + + +S+ TE
Sbjct: 1 MKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRIKEEGLSIVGVTTSKETEKQALA 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+SK
Sbjct: 61 LGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKSKM 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 VDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIIDLH 175
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 219
>gi|309803108|ref|ZP_07697205.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 11V1-d]
gi|308164616|gb|EFO66866.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 11V1-d]
Length = 231
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 7/231 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTEN 60
++K+ AA++A V LG+GTGST F+ LA ++ +S +
Sbjct: 6 QDELKQEAAKKAALMVEPNSVLGVGTGSTVAFFIDELAKINREKALNLKAIVTTSNRSRA 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ ++ +V +DL++DG D +D L IKG GGAL EK +A + + I I D
Sbjct: 66 QLEKQGFKVNELSEVDQIDLTVDGADRVDLNLNGIKGGGGALTLEKNVAVNSKKNIWIVD 125
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K VD L LP+E+ + + GL + RL NG +++ GN+I
Sbjct: 126 ETKFVDRLKDFALPVEVLPISCEQNFRTFSQE----GLLPKYRLDDNGK-RYITHYGNFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D IP P +++ L ++ GV+EHGLF+N+ + II SDG+ + ++
Sbjct: 181 IDLHVDPIPFPNVLAHYLDSVVGVVEHGLFLNICNEVIIAHSDGKIEIRKR 231
>gi|259501616|ref|ZP_05744518.1| ribose 5-phosphate isomerase [Lactobacillus iners DSM 13335]
gi|302191177|ref|ZP_07267431.1| ribose-5-phosphate isomerase A [Lactobacillus iners AB-1]
gi|309804820|ref|ZP_07698884.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 09V1-c]
gi|309807878|ref|ZP_07701809.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 01V1-a]
gi|309809898|ref|ZP_07703746.1| ribose 5-phosphate isomerase A [Lactobacillus iners SPIN 2503V10-D]
gi|312871631|ref|ZP_07731723.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 3008A-a]
gi|312873246|ref|ZP_07733302.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 2052A-d]
gi|312874607|ref|ZP_07734631.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 2053A-b]
gi|315653679|ref|ZP_07906599.1| ribose 5-phosphate isomerase [Lactobacillus iners ATCC 55195]
gi|325911704|ref|ZP_08174111.1| ribose 5-phosphate isomerase A [Lactobacillus iners UPII 143-D]
gi|325912993|ref|ZP_08175366.1| ribose 5-phosphate isomerase A [Lactobacillus iners UPII 60-B]
gi|329921060|ref|ZP_08277583.1| ribose 5-phosphate isomerase A [Lactobacillus iners SPIN 1401G]
gi|259166901|gb|EEW51396.1| ribose 5-phosphate isomerase [Lactobacillus iners DSM 13335]
gi|308165930|gb|EFO68149.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 09V1-c]
gi|308168858|gb|EFO70945.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 01V1-a]
gi|308169686|gb|EFO71731.1| ribose 5-phosphate isomerase A [Lactobacillus iners SPIN 2503V10-D]
gi|311089837|gb|EFQ48257.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 2053A-b]
gi|311091257|gb|EFQ49645.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 2052A-d]
gi|311092856|gb|EFQ51208.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 3008A-a]
gi|315489041|gb|EFU78683.1| ribose 5-phosphate isomerase [Lactobacillus iners ATCC 55195]
gi|325476470|gb|EGC79629.1| ribose 5-phosphate isomerase A [Lactobacillus iners UPII 143-D]
gi|325477673|gb|EGC80812.1| ribose 5-phosphate isomerase A [Lactobacillus iners UPII 60-B]
gi|328934967|gb|EGG31456.1| ribose 5-phosphate isomerase A [Lactobacillus iners SPIN 1401G]
Length = 231
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 7/231 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTEN 60
++K+ AA++A V LG+GTGST F+ LA ++ +S +
Sbjct: 6 QDELKQEAAKKAALMVEPNSVLGVGTGSTVAFFIDELAKINREKALNLKAIVTTSNRSRA 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ ++ +V +DL++DG D +D L IKG GGAL EK +A + + I I D
Sbjct: 66 QLEKQGFKVNELSEVDQIDLTVDGADRVDLNLNGIKGGGGALTLEKNVAVNSKKNIWIVD 125
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K VD L LP+E+ + + GL + RL NG +++ GN+I
Sbjct: 126 ETKFVDRLKGFALPVEVLPISCEQNFRTFSQE----GLLPKYRLDDNGK-RYITHYGNFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D IP P +++ L ++ GV+EHGLF+N+ + II SDG+ + ++
Sbjct: 181 IDLHVDPIPFPNVLAHYLDSVVGVVEHGLFLNICNEVIIAHSDGKIEIRKR 231
>gi|45501203|gb|AAH67177.1| Rpia protein [Danio rerio]
Length = 241
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 8/233 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
A + K+ AA A+ ++ + +G+G+GST + LA+K+ + +P+S
Sbjct: 8 AEEAKKLAAYAAVDNHIQNNQVIGVGSGSTIVYAVDRLAEKVRQEKLNIVCVPTSFQARQ 67
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H +PL + +D++IDG DE+D+ L LIKG GG L +EKI+A A FIVI D
Sbjct: 68 LILQHGLPLSDLDRHPELDVAIDGADEVDTALTLIKGGGGCLTQEKIVAGCAKHFIVIAD 127
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K + +P+E+ A+ A FG LR+ + +G V+D
Sbjct: 128 YRKDSKALGQQWKKGVPVEVIPMAYVPVSRAI---AHRFGGEAVLRMAVSKAGPVVTDNS 184
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N+I+D F + + ++ + IPGV+E GLF+ M + G DG
Sbjct: 185 NFILDWKFEHAQNWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTRD 237
>gi|306829334|ref|ZP_07462524.1| ribose 5-phosphate isomerase A [Streptococcus mitis ATCC 6249]
gi|304428420|gb|EFM31510.1| ribose 5-phosphate isomerase A [Streptococcus mitis ATCC 6249]
Length = 227
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQHFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL +I GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHIVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|37519599|ref|NP_922976.1| ribose-5-phosphate isomerase A [Gloeobacter violaceus PCC 7421]
gi|41017643|sp|Q7NPM5|RPIA_GLOVI RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|35210590|dbj|BAC87971.1| ribose 5-phosphate isomerase [Gloeobacter violaceus PCC 7421]
Length = 230
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 136/231 (58%), Gaps = 9/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +K+ AARRA++ V DGM +G+GTGSTA + +LA+++ G RV IP+S T
Sbjct: 1 MDLDILKQTAARRAVELVEDGMVVGLGTGSTAAFAVSVLAERVRLGLRVVGIPTSERTAR 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I L + + S VDL+IDG DE+ L LIKG GGALLREKI+A A+ R I+I
Sbjct: 61 QAEAEGIVLGTLAEQSRVDLTIDGADEVALGELALIKGLGGALLREKIVAAASERLIIIV 120
Query: 120 DESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D +K V+ LG G LP+E+ FG T AL+ L E+ LR F++DGG+
Sbjct: 121 DATKLVEQLGSHGPLPVEVAPFGWQATARALER------LGAEVNLRAQHGQAFLTDGGH 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
YI+D FG I P + + IPGV+E GLF+ M I+ +G VL
Sbjct: 175 YILDCRFGPIARPAELEAAIDRIPGVVESGLFVGMASAVIVA-DEGGIEVL 224
>gi|18654317|gb|AAL77589.1|L43068_1 chloroplast ribose-5-phosphate isomerase [Spinacia oleracea]
Length = 289
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 126/229 (55%), Gaps = 6/229 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
+K+ AA +A+ V GM LG+GTGSTA + + + ++ G + IP+S+ T
Sbjct: 57 TQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIPTSKRTA 116
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+ +FIV+
Sbjct: 117 EQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVV 176
Query: 120 DESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D++K VD R +P+E+ QF L L+E+ G +LR+ S +V+D
Sbjct: 177 DDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRM-EGDSSPYVTDNS 235
Query: 178 NYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
NYIVD +F I D + E+ + GV+EHGLF+ M II G
Sbjct: 236 NYIVDLYFPTSIKDAEAAGREISALEGVVEHGLFLGMASEVIIAGKTGV 284
>gi|295690321|ref|YP_003594014.1| ribose 5-phosphate isomerase [Caulobacter segnis ATCC 21756]
gi|295432224|gb|ADG11396.1| ribose 5-phosphate isomerase [Caulobacter segnis ATCC 21756]
Length = 228
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 137/228 (60%), Gaps = 3/228 (1%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
A KR + A Q V +GM +G+GTGSTA F+ LA + ++ +P+S T
Sbjct: 3 SADDQKRASGEAAAQLVENGMVVGLGTGSTAAWFVKALAAR--KLTNIKGVPTSDATAAL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IPL + +DV ++DL++DG DEI L LIKG G ALLREK++ A++R + I D
Sbjct: 61 ARELGIPLVALDDVKTIDLTVDGADEIGPGLSLIKGGGAALLREKLVWEASTRCVAIADA 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
+KRV LG+ LPIE+ +FG T L ++A+ F L RLR G+ V+DGGN I
Sbjct: 121 AKRVPALGKFPLPIEVVRFGHVHTGHRLADIAAEFDLPP-PRLRTAERGVVVTDGGNLIY 179
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
D G I +P ++ L ++ GV++HGLF+++ D A++GT DG ++
Sbjct: 180 DMASGRIDEPAALATALKSVTGVVDHGLFLDLADEALVGTDDGVVRLV 227
>gi|85711162|ref|ZP_01042222.1| ribose-5-phosphate isomerase A [Idiomarina baltica OS145]
gi|85695075|gb|EAQ33013.1| ribose-5-phosphate isomerase A [Idiomarina baltica OS145]
Length = 222
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M A ++K+ AA+ AI+YV G +G+GTGST F+ LA KI + V S +TE
Sbjct: 1 MSASDKLKQQAAQAAIKYVEKGAIVGVGTGSTVNFFIDELA-KIKDDIEGAVSSSDASTE 59
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K H I + + V + IDG DEID ++IKG G AL REKI+A A +F+ I
Sbjct: 60 RL-KQHGIEVFELNNAPEVPVYIDGADEIDEHGQMIKGGGAALTREKIVAAVAKKFVCIA 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V LG LP+E+ + + + G + R +D GN+
Sbjct: 119 DESKLVGRLGTFPLPVEVIPMARSYVAREIVK----LGGDPVWRQG------VTTDNGNW 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I + + +L N+ GV+ +GLF D A++ TS+G +
Sbjct: 169 ILDVHNFDILNAVELEEQLNNVVGVVTNGLFAARSADVALLATSEGVKEL 218
>gi|89093806|ref|ZP_01166752.1| ribose 5-phosphate isomerase [Oceanospirillum sp. MED92]
gi|89081936|gb|EAR61162.1| ribose 5-phosphate isomerase [Oceanospirillum sp. MED92]
Length = 223
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 113/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M +MK+ A A++Y+ +G+GTGSTA F+ LA+ + SS
Sbjct: 1 MTQDEMKKAVAEAAVEYIKPKLTEDSIVGVGTGSTANFFIDALAE--IKHMFEGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H I + VS +++ +DG DE DS L L+KG GGAL REKI+A A F+
Sbjct: 59 ATAERLKGHGIEVFDMNSVSEMEVYVDGADEFDSGLNLVKGGGGALTREKIVAAVAKEFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK+VD LG LP+E+ ++ E R FV+D
Sbjct: 119 CIVDSSKKVDVLGEFPLPVEVIPMARSQVARE----LVKLDGMPEWRQG------FVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I P+ + +L NI GV+ +GLF N D ++GT G +
Sbjct: 169 GNLILDVHDLEIMRPKELEKQLNNIVGVVTNGLFANRGADVVLMGTESGVETI 221
>gi|330818947|ref|YP_004385926.1| Ribose-5-phosphate isomerase A [Lactobacillus buchneri NRRL
B-30929]
gi|329130083|gb|AEB74635.1| Ribose-5-phosphate isomerase A [Lactobacillus buchneri NRRL
B-30929]
Length = 235
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 7/224 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
Q+KR + A++YV + M +G+GTGST K + L +++ N + +P+S T
Sbjct: 11 SQDQLKRLVGKEAVKYVQNNMIVGLGTGSTVKYMVDALGERVNNDNLSIVGVPTSDRTRV 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IP ++V +DL+IDG D+ID + IKG GGA L EKI+A + + + I D
Sbjct: 71 QANRLGIPTKGVDEVDHIDLTIDGADQIDQNFQGIKGGGGAHLWEKIVAINSRKNMWIVD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK D LG LP+E+ +G + GL E R+ ++D NYI
Sbjct: 131 ESKMTDQLGSFPLPLEVIPYGSKQLFKR----LYNKGLKPEFRM--KDEQHVLTDSKNYI 184
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+D I DP+ ++ EL ++ G++EHGLF+N+V+ I+G G
Sbjct: 185 IDLHLHQIKDPKKLASELDHMTGIVEHGLFLNVVNTVIVGYESG 228
>gi|220910235|ref|YP_002485546.1| ribose-5-phosphate isomerase A [Cyanothece sp. PCC 7425]
gi|254808707|sp|B8HN58|RPIA_CYAP4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|219866846|gb|ACL47185.1| ribose 5-phosphate isomerase [Cyanothece sp. PCC 7425]
Length = 237
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ A+ A V G +G+GTGST + L +++A G ++ +P+S K
Sbjct: 11 MKQAVAQTAAARVTSGAVVGLGTGSTTALMIQCLGERLAKGELANIKGVPTSFQASVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + ++V +DL+IDG DE+D + LIKG G A REK++ A FIV+ D SK
Sbjct: 71 QYGIPLVTLDEVEKIDLAIDGADEVDPQKNLIKGGGAAHTREKVVDALADLFIVVVDSSK 130
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ + + A+ G +LR+ G ++D GN ++D
Sbjct: 131 LVDQLGSTFPVPVEVLPMALTPVMRAVTR----LGGEPQLRMGVKKDGPVITDQGNMVLD 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F IPDP + L NIPGV+E+G+F+N+ ++G DG+ V +
Sbjct: 187 VKFAAIPDPAELEKTLNNIPGVVENGIFVNLAKVILVGELKDGQPSVRE 235
>gi|294627128|ref|ZP_06705716.1| ribose-5-phosphate isomerase A [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667401|ref|ZP_06732619.1| ribose-5-phosphate isomerase A [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598561|gb|EFF42710.1| ribose-5-phosphate isomerase A [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602842|gb|EFF46275.1| ribose-5-phosphate isomerase A [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 215
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S +++ +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSSARLRQQ 61
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 62 -GIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGNFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + L IPGV+ GLF D I+G
Sbjct: 172 HLQITDPVGLERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|241888613|ref|ZP_04775920.1| ribose 5-phosphate isomerase A [Gemella haemolysans ATCC 10379]
gi|241864636|gb|EER69011.1| ribose 5-phosphate isomerase A [Gemella haemolysans ATCC 10379]
Length = 224
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 86/225 (38%), Positives = 126/225 (56%), Gaps = 6/225 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K ++A+ YV DGM +G+GTGST F+ LAD++ G V+++ +S T K
Sbjct: 1 MNLKEVVGKKAVDYVKDGMIVGLGTGSTVFYFVHALADRVKEGLNVEMVSTSIQTVELAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + E++ +DL++DG DEID IKG G AL REKI+A A I I DESK
Sbjct: 61 SLGLSIKELEEIDHIDLAVDGVDEIDKDFNAIKGGGAALFREKIVADIAREVIWIYDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ LG LP+EI FG + T+ ++EV + LR ++D NYIVD
Sbjct: 121 DVEKLGNFNLPVEILPFGYSHTIRKMEEVGL------KPVLRLKDGATLITDNNNYIVDL 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
G+ D + + +L +I GV+EHGLF+NM I GT G ++
Sbjct: 175 HLGYGFDIKAVKEKLESIVGVVEHGLFLNMCKLCIKGTEQGAVII 219
>gi|332685769|ref|YP_004455543.1| ribose 5-phosphate isomerase A [Melissococcus plutonius ATCC 35311]
gi|332369778|dbj|BAK20734.1| ribose 5-phosphate isomerase A [Melissococcus plutonius ATCC 35311]
Length = 229
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 5/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A A +YV +GMT+G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQRAGIEAAKYVENGMTVGLGTGSTAKFMVEEIGRRVREEGLTITGVATSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VD++IDG DEI IKG G ALL EKI+A + + I I DES
Sbjct: 61 LSLGIPLKSIDEVPYVDITIDGADEISQDFHGIKGGGAALLFEKIVATYSKKCIWIVDES 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG LP+E+ +G + L++ + +R + ++D G+YI D
Sbjct: 121 KLVKSLGAFPLPVEVIPYGSQQLFHLLEKN----DYHPTVRKSSKNNAPHITDSGHYIFD 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP +S L N+ GV+EHGLF+N+V I+ G +
Sbjct: 177 LHLDKIEDPVSLSSYLDNLVGVVEHGLFLNIVSLVIVSHDKGIHTL 222
>gi|322376381|ref|ZP_08050874.1| ribose 5-phosphate isomerase A [Streptococcus sp. M334]
gi|321282188|gb|EFX59195.1| ribose 5-phosphate isomerase A [Streptococcus sp. M334]
Length = 227
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFRQKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGQDGVQILTS 223
>gi|148240402|ref|YP_001225789.1| ribose-5-phosphate isomerase A [Synechococcus sp. WH 7803]
gi|166229252|sp|A5GNH7|RPIA_SYNPW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|147848941|emb|CAK24492.1| Ribose-5-phosphate isomerase A [Synechococcus sp. WH 7803]
Length = 238
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 125/228 (54%), Gaps = 8/228 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A+Q DGM +G+G+GSTA + L +++A G + + +S E
Sbjct: 5 QNQMKQAVADAAVQQFRDGMVVGLGSGSTAALMIKGLGERLAAGQLSDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RFIV+ D
Sbjct: 65 LAAELGIPLRSLNAVDRIDLAIDGADEVDPAFQLIKGGGACHVQEKLVAARADRFIVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K V+ L +LP+E+ + + G + ELR+ +G V+D GN
Sbjct: 125 STKLVERLNLGFLLPVEVLPGAW----VQISQQLKAMGGDAELRMATRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
++D F G I DP + E+ NIPGV+E+GLF+N+ D ++G DG
Sbjct: 181 VLDVRFEGGIADPASLEKEINNIPGVLENGLFVNLADEVLVGQIDGGV 228
>gi|288942597|ref|YP_003444837.1| ribose 5-phosphate isomerase [Allochromatium vinosum DSM 180]
gi|288897969|gb|ADC63805.1| ribose 5-phosphate isomerase [Allochromatium vinosum DSM 180]
Length = 218
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 117/229 (51%), Gaps = 14/229 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ +K+ AA A+ YV G +G+GTGST F+ LA I N V S +TE
Sbjct: 1 MNQDDLKKQAAEAALDYVEGG-VIGVGTGSTVNHFIDALAG-IKNRIEGAVSSSEVSTER 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H IP+ V + L +DG DE + RL LIKG GGAL REKI+A A+ +F+ I D
Sbjct: 59 L-KRHGIPVFDLNAVGELALYVDGADEANGRLELIKGGGGALTREKIVAAASRKFVCIAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V+ LGR LP+E+ + G R FV+D GN I
Sbjct: 118 ESKLVEVLGRFPLPVEVIPMARSYVARE----LVRLGGTPVWREG------FVTDNGNLI 167
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
+D I DPQ + ++ NI GV+ G+F + D I+G++ G +
Sbjct: 168 LDVQNLEITDPQGLEQQVNNIAGVVTVGIFALRPADVLILGSARGPRAI 216
>gi|329768069|ref|ZP_08259579.1| ribose 5-phosphate isomerase A [Gemella haemolysans M341]
gi|328838337|gb|EGF87947.1| ribose 5-phosphate isomerase A [Gemella haemolysans M341]
Length = 224
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 88/225 (39%), Positives = 129/225 (57%), Gaps = 6/225 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K ++A++YV DGM +G+GTGST F+ LAD++ G V+++ +S T K
Sbjct: 1 MNLKEVVGKKAVEYVKDGMVVGLGTGSTVFYFVHALADRVKEGLNVEMVSTSIQTVELAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + E++ +DL++DG DEID IKG G AL REKI+A A I I DESK
Sbjct: 61 SLGLKIKELEEIDHIDLAVDGVDEIDKDFNAIKGGGAALFREKIVADIACEVIWIYDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ LG LP+EI FG + T+ ++E GLN LR ++D N+IVD
Sbjct: 121 DVEKLGNFNLPVEILPFGYSHTIRKMEEA----GLNPV--LRLKDGATLITDNSNFIVDL 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
G+ D + + +L +I GV+EHGLF+NM I GT DG ++
Sbjct: 175 HLGYGFDIKAVKEKLESIVGVVEHGLFLNMCKLCIKGTEDGAIII 219
>gi|255974701|ref|ZP_05425287.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T2]
gi|255967573|gb|EET98195.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T2]
Length = 224
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 89/224 (39%), Positives = 127/224 (56%), Gaps = 6/224 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
MK+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TEN
Sbjct: 1 MKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETENQALA 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+SK
Sbjct: 61 LGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKSKM 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 VDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIIDLH 175
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 219
>gi|149376828|ref|ZP_01894584.1| ribose 5-phosphate isomerase [Marinobacter algicola DG893]
gi|149358835|gb|EDM47303.1| ribose 5-phosphate isomerase [Marinobacter algicola DG893]
Length = 226
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 117/236 (49%), Gaps = 17/236 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ ++K+ A+ A+ ++ +G+GTGSTA F+ LLAD I F + SS
Sbjct: 1 MNQDELKKAVAKAALDHIRPHLDQESVIGVGTGSTANCFIDLLAD-IRTDFD-GAVASSD 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ ++ +DG DE + RL LIKG GGAL REKI+A A FI
Sbjct: 59 ATAERLKSHGIPVYDLNSAGPLEFYVDGADETNERLELIKGGGGALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG LP+E+ + + + G + R F +D
Sbjct: 119 CIADGSKEVDILGAFPLPVEVVPMARSHVGREIVK----LGGDPVYREG------FTTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
GN I+D I P + +L NI G++ +GLF D ++GT DG + +K
Sbjct: 169 GNIILDIHNLDISRPIQVEEQLNNIVGIVTNGLFARRPADLLLLGTEDGVKTISRK 224
>gi|326423850|ref|NP_760445.2| ribose 5-phosphate isomerase A [Vibrio vulnificus CMCP6]
gi|30173261|sp|Q8DC93|RPIA_VIBVU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|319999221|gb|AAO09972.2| ribose 5-phosphate isomerase A [Vibrio vulnificus CMCP6]
Length = 218
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + SS +
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALGTMSEE--IKGAVSSSVASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V+S+D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 59 KLEALGIKIFDCNEVASLDIYVDGADEINADREMIKGGGAALTREKIVAAIADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGTFPLPVEVIPMARSYVARQ----LVKLGGDPCYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ IPGV+ GLF + D I GT +G +
Sbjct: 169 LDVYGMKITNPKQLEDQINGIPGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|315634901|ref|ZP_07890183.1| ribose 5-phosphate isomerase [Aggregatibacter segnis ATCC 33393]
gi|315476453|gb|EFU67203.1| ribose 5-phosphate isomerase [Aggregatibacter segnis ATCC 33393]
Length = 218
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+Q+V M +G+G+GST F+ L + + + + +S+N+E
Sbjct: 1 MNQLEMKKIAAQAALQFVKPDMIVGVGSGSTVNCFIEALG-TLKDQIK-GAVAASKNSEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A FI I D
Sbjct: 59 LLRQQGIEVFSTNDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKNFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LPIE+ ++ G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPIEVIPMARSQVARK----LVTLGGAPEYREG------VVTDNGNI 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL NI GV+ +G+F + + I+GT DG ++
Sbjct: 169 ILDVHNFAIMNPVEMEKELNNIAGVVTNGVFALRPANTVIVGTPDGAKII 218
>gi|260771293|ref|ZP_05880220.1| ribose 5-phosphate isomerase A [Vibrio furnissii CIP 102972]
gi|260613890|gb|EEX39082.1| ribose 5-phosphate isomerase A [Vibrio furnissii CIP 102972]
Length = 218
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I +G + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-SIKDGIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV+ +D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 60 LKGL-GIEVFDCNDVAGLDVYVDGADEINPQREMIKGGGAALTREKIVAAIADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGGFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VLTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + ++ I GV+ +GLF + D I GT +G +
Sbjct: 169 LDVHNMRITDAKDLESKINAIAGVVTNGLFAHRGADVVITGTPEGAKI 216
>gi|256855155|ref|ZP_05560516.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T8]
gi|307291636|ref|ZP_07571511.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0411]
gi|256709668|gb|EEU24715.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T8]
gi|306497255|gb|EFM66797.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0411]
gi|315028884|gb|EFT40816.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX4000]
Length = 226
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 127/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV +GM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEEGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|194220491|ref|XP_001497518.2| PREDICTED: ribose 5-phosphate isomerase A (ribose 5-phosphate
epimerase) [Equus caballus]
Length = 309
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 8/236 (3%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 74 MSKAEEKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQA 133
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIVI
Sbjct: 134 RQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVI 193
Query: 119 GDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D K +PIE+ A+ FG ELR+ N +G V+D
Sbjct: 194 ADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVTR---KFGGTIELRMAINKAGPVVTD 250
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 251 NGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 306
>gi|186681596|ref|YP_001864792.1| ribose-5-phosphate isomerase A [Nostoc punctiforme PCC 73102]
gi|186464048|gb|ACC79849.1| ribose 5-phosphate isomerase [Nostoc punctiforme PCC 73102]
Length = 235
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 128/229 (55%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L D++ +G + IP+S +E K
Sbjct: 10 MKQEVGKAAAALVKSGSIVGLGTGSTTAYTIQFLGDRLKSGELKDIIGIPTSFQSEVLAK 69
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + + +D++IDG DE+D + LIKG G A REK++ + A +FIV+ D K
Sbjct: 70 QYGVPLATLDSIDHIDIAIDGADEVDPQKNLIKGGGAAHTREKVVDYLAEQFIVVVDSGK 129
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ + +A+K+ G ELR+ +G ++D GN+++D
Sbjct: 130 LVDRLGSSFAVPVEVIPMAITPVTNAIKK----LGGKPELRMGVKKAGPVITDQGNFVLD 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + L NIPGV+E+G+F+N VD +IG DG+ LV Q
Sbjct: 186 VRFDSIEDPVSLEKTLNNIPGVLENGIFVNCVDLVLIGEVKDGQPLVRQ 234
>gi|317496028|ref|ZP_07954390.1| ribose 5-phosphate isomerase A [Gemella moribillum M424]
gi|316913932|gb|EFV35416.1| ribose 5-phosphate isomerase A [Gemella moribillum M424]
Length = 225
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 88/225 (39%), Positives = 131/225 (58%), Gaps = 6/225 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K + A+ YV DGM +G+GTGST F+ LA+K+ G ++++ +S T K
Sbjct: 1 MNLKEVVGKEAVNYVKDGMIVGLGTGSTVFYFVHALAEKVKEGLNIEMVSTSIQTVELAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + E++ +DL++DG DEID IKG G AL REKI+A A + I I DESK
Sbjct: 61 SLGLVIKELEEIDHIDLAVDGVDEIDKNFNAIKGGGAALFREKIVADIAEKIIWIFDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ LG LP+EI FG + T+ +++ GLN LRL+ + V+D NYIVD
Sbjct: 121 DVEKLGNFNLPVEILPFGYSHTIRKMEK----LGLNPVLRLKDGKT--LVTDNHNYIVDL 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
G+ + + +L +I GV+EHGLF+NM D I GT +G ++
Sbjct: 175 HLGYGFNIDEVKNKLADIVGVVEHGLFLNMCDLCISGTPNGAIVI 219
>gi|291386361|ref|XP_002709663.1| PREDICTED: ribose 5-phosphate isomerase A [Oryctolagus cuniculus]
Length = 311
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 134
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A AS FIV
Sbjct: 135 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASHFIV 194
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ FG +LR+ + +G V+
Sbjct: 195 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVTR---KFGGEVQLRMAVHKAGPVVT 251
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F ++ + IPGV++ GLFINM + G DG V +K
Sbjct: 252 DNGNFILDWKFDRAHKWSEVNIAIKMIPGVVDTGLFINMAERVYFGMQDGSVTVREK 308
>gi|225023929|ref|ZP_03713121.1| hypothetical protein EIKCOROL_00795 [Eikenella corrodens ATCC
23834]
gi|224942954|gb|EEG24163.1| hypothetical protein EIKCOROL_00795 [Eikenella corrodens ATCC
23834]
Length = 222
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 83/231 (35%), Positives = 128/231 (55%), Gaps = 16/231 (6%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV-IPSSRNT 58
M Q+KR AA++A+++V + +G+GTGST F+ LA+ +G R++ + +S+ T
Sbjct: 1 MSAQDQLKRTAAQKALEFVPENAYIGIGTGSTVNFFIEELAN---SGIRIKGAVSTSKAT 57
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
K H IP + + + IDG DE++ L++IKG GGALL EKI+A AA +F+ I
Sbjct: 58 SELLKQHGIPEVPLTEADELPVYIDGADEVNHSLQMIKGGGGALLAEKIVASAAEKFVCI 117
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V LG+ LPIEI + +G + +LRL F +D G+
Sbjct: 118 VDESKYVSRLGKFPLPIEIIPAARSLVSRQ----LLKYGGSPQLRLN------FTTDSGH 167
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
I+D I +P + EL IPG++E+GLF + IIG ++G ++
Sbjct: 168 KIIDVHNMPINEPLKLEDELNRIPGIVENGLFARHPAHVLIIGRAEGAEVI 218
>gi|302818958|ref|XP_002991151.1| hypothetical protein SELMODRAFT_448303 [Selaginella moellendorffii]
gi|300141082|gb|EFJ07797.1| hypothetical protein SELMODRAFT_448303 [Selaginella moellendorffii]
Length = 275
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 8/231 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
+KR A+RA++ V GM +G+GTGST+ + L ++ G V + SS +
Sbjct: 32 QDSLKRAVAKRAVELVKPGMIVGLGTGSTSSMAIQELGKLVSQGKLKDVVGVASSYQSRI 91
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + DV+ +D + DG DE+D+ + LIKG G A EK++ A + I++ D
Sbjct: 92 LARQYGVKTVDLNDVNVIDFAFDGADEVDASMNLIKGGGAAHTMEKVVDAMAKQCIILVD 151
Query: 121 ESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+SK V +P+E+ F ++ L A G E+R G ++D GN
Sbjct: 152 QSKVVSKLGLTFPVPVEVLPFAISPVLRA----LVGLGGVPEIRNALRKDGPVITDLGNM 207
Query: 180 IVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+VD F + +P + + IPGV+E GLF+ + + ++ T DG+ + +
Sbjct: 208 VVDVRFPDGVKNPAEMERSINMIPGVVESGLFVGIANTVLVATRDGDEITI 258
>gi|312871949|ref|ZP_07732031.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 2062A-h1]
gi|311092526|gb|EFQ50888.1| ribose 5-phosphate isomerase A [Lactobacillus iners LEAF 2062A-h1]
Length = 231
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 73/231 (31%), Positives = 118/231 (51%), Gaps = 7/231 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTEN 60
++K+ AA++A V LG+GTGST F+ LA ++ +S +
Sbjct: 6 QDELKQEAAKKAALMVEPNSVLGVGTGSTVAFFIDELAKINREKALNLKAIVTTSNRSRA 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ ++ +V +DL++DG D +D L IKG GGAL EK +A + + I I D
Sbjct: 66 QLEKQGFKVNELSEVDQIDLTVDGADRVDLNLNGIKGGGGALTLEKNVAVNSKKNIWIVD 125
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K VD L LP+E+ + + GL + RL NG +V+ GN+I
Sbjct: 126 ETKFVDRLKGFALPVEVLPISCEQNFRTFSQE----GLLPKYRLDVNGK-RYVTHYGNFI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D IP P +++ L ++ GV+EHGLF+N+ + II SDG+ + ++
Sbjct: 181 IDLHVDPIPFPNVLAHYLDSVVGVVEHGLFLNICNEVIIAHSDGKIEIRKR 231
>gi|302775013|ref|XP_002970923.1| hypothetical protein SELMODRAFT_441314 [Selaginella moellendorffii]
gi|300161634|gb|EFJ28249.1| hypothetical protein SELMODRAFT_441314 [Selaginella moellendorffii]
Length = 275
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 8/231 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
+KR A+RA++ V GM +G+GTGST+ + L ++ G V + SS +
Sbjct: 32 QDSLKRAVAKRAVELVKPGMIVGLGTGSTSSMAIQELGKLVSQGKLKDVVGVASSYQSRI 91
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + DV+ +D + DG DE+D+ + LIKG G A EK++ A + I++ D
Sbjct: 92 LARQYGVKTVDLNDVNVIDFAFDGADEVDASMNLIKGGGAAHTMEKVVDAMAKQCIILVD 151
Query: 121 ESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
++K V +P+E+ F ++ L A G E+R G ++D GN
Sbjct: 152 QTKVVSKLGLTFPVPVEVLPFAISPVLRA----LVGLGGVPEIRNALRKDGPVITDLGNM 207
Query: 180 IVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+VD F + DP + + IPGV+E GLF+ + + ++ T DG+ + +
Sbjct: 208 VVDVRFPDGVKDPAEMERSINMIPGVVESGLFVGIANTVLVATRDGDEITI 258
>gi|330806927|ref|YP_004351389.1| ribose-5-phosphate isomerase A [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375035|gb|AEA66385.1| Ribose-5-phosphate isomerase A [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 224
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ + D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDLILPKLDDKSVVGVGTGSTANCFIDALAQH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ IDG DE D+ L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYIDGADESDAHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPVLGAFPLPVEVIPMARSHVARE----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I +P + ++ I GV+ +GLF D ++GT +G +
Sbjct: 169 GNIILDVHNLQITNPVELESQINAIVGVVTNGLFAARPADVLLLGTPEGVKTLR 222
>gi|257088641|ref|ZP_05583002.1| ribose-5-phosphate isomerase A [Enterococcus faecalis CH188]
gi|312903923|ref|ZP_07763093.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0635]
gi|256997453|gb|EEU83973.1| ribose-5-phosphate isomerase A [Enterococcus faecalis CH188]
gi|310632719|gb|EFQ16002.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0635]
gi|315160719|gb|EFU04736.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0645]
gi|315579317|gb|EFU91508.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0630]
Length = 226
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 126/226 (55%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K D LG LP+E+ +G L + G + LRL G ++DGG++I+D
Sbjct: 121 KMADDLGAFPLPVEVVPYGS----RQLVHLFEEKGYHPTLRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|319407355|emb|CBI81002.1| Ribose 5-phosphate isomerase [Bartonella sp. 1-1C]
Length = 234
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 142/215 (66%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+ V D M LG+GTGST EF+ LL + I NG R+ + +S ++E+ C+ +P+ + + +
Sbjct: 16 ESVQDYMRLGIGTGSTVNEFIRLLGECITNGLRITGVATSYHSEHLCRQFGVPITTLDKI 75
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
S +DL IDG DEID ++ LIKG GGALL EKI+A A+ ++I DE+K V LG +PI
Sbjct: 76 SKLDLCIDGADEIDPQMVLIKGRGGALLHEKIVASASDEMLIIADETKMVKTLGASGVPI 135
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E++ FG+N T A+++V S G + E++LR NG F +DGG++IVDAF G I +P+ +S
Sbjct: 136 EVNPFGMNATCKAIEKVVSNLGFSGEIKLRMNGDIPFETDGGHFIVDAFLGSILNPKELS 195
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
L +PGV+EHGLF+ AI+ +DG L+
Sbjct: 196 DALLGVPGVVEHGLFLGFASRAIVAMADGTIKFLE 230
>gi|325576991|ref|ZP_08147562.1| ribose 5-phosphate isomerase [Haemophilus parainfluenzae ATCC
33392]
gi|325160949|gb|EGC73068.1| ribose 5-phosphate isomerase [Haemophilus parainfluenzae ATCC
33392]
Length = 219
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AAR A++YV +G+G+GST F+ L + + +S+ +E
Sbjct: 1 MDQLEMKKLAARAALKYVKPDTIVGVGSGSTVNCFIEALGEL--KDQIQGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFSANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G E R V+D GN
Sbjct: 119 ASKQVDVLGSTFPLPVEVIPMARSQVGRK----LVSLGGAPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT DG ++
Sbjct: 169 ILDVHNFAILNPVEMEKELNNVAGVVTNGIFALRGADIVIVGTPDGAKII 218
>gi|256956870|ref|ZP_05561041.1| ribose-5-phosphate isomerase A [Enterococcus faecalis DS5]
gi|257078540|ref|ZP_05572901.1| ribose-5-phosphate isomerase A [Enterococcus faecalis JH1]
gi|294781043|ref|ZP_06746394.1| ribose 5-phosphate isomerase A [Enterococcus faecalis PC1.1]
gi|300861959|ref|ZP_07108039.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TUSoD Ef11]
gi|307269078|ref|ZP_07550439.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX4248]
gi|307287023|ref|ZP_07567098.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0109]
gi|312901131|ref|ZP_07760419.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0470]
gi|256947366|gb|EEU63998.1| ribose-5-phosphate isomerase A [Enterococcus faecalis DS5]
gi|256986570|gb|EEU73872.1| ribose-5-phosphate isomerase A [Enterococcus faecalis JH1]
gi|294451846|gb|EFG20297.1| ribose 5-phosphate isomerase A [Enterococcus faecalis PC1.1]
gi|295112498|emb|CBL31135.1| ribose-5-phosphate isomerase [Enterococcus sp. 7L76]
gi|300848484|gb|EFK76241.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TUSoD Ef11]
gi|306501969|gb|EFM71258.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0109]
gi|306514558|gb|EFM83112.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX4248]
gi|311291803|gb|EFQ70359.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0470]
gi|315031130|gb|EFT43062.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0017]
gi|315036024|gb|EFT47956.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX0027]
gi|315145326|gb|EFT89342.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX2141]
gi|315168091|gb|EFU12108.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX1341]
gi|329577758|gb|EGG59184.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX1467]
Length = 226
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 129/226 (57%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G + + KE G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGSCQLVHLFKEK----GYHPALRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|302035736|ref|YP_003796058.1| ribose-5-phosphate isomerase A [Candidatus Nitrospira defluvii]
gi|300603800|emb|CBK40132.1| Ribose-5-phosphate isomerase A [Candidatus Nitrospira defluvii]
Length = 238
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 6/229 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
D K+ AA +A +YV DGM +G+GTGST+K +I L +++ G R+ +P+S +T
Sbjct: 11 DLDSEKQRAAMKAAEYVRDGMVVGLGTGSTSKHLIIALGERVRAGLRIHAVPTSHDTAAL 70
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IPL ++ +D++IDG D++D L L+KG GGALL+EKI+A AA RFIV+ D
Sbjct: 71 ARQSGIPLIESDNAWMIDVAIDGADQVDPALNLVKGGGGALLKEKIVAAAAKRFIVMVDH 130
Query: 122 SKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V G LPIE+ FG T ++ + + LR +F ++ G+ I
Sbjct: 131 TKLVPALGGSFPLPIEVVPFGWGSTARNIEHTS-----GGKAVLRERNGVVFQTEAGHVI 185
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+D I DP + EL IPG++E GLFI I+G + G + L
Sbjct: 186 LDLHMPKIDDPATLEIELNQIPGIVETGLFIGRTSILIVGHAQGADVTL 234
>gi|117620736|ref|YP_857236.1| ribose-5-phosphate isomerase A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166200029|sp|A0KLT5|RPIA_AERHH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|117562143|gb|ABK39091.1| ribose 5-phosphate isomerase A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 217
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YVV G +G+GTGST F+ LA + + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVVPGTIVGVGTGSTVNHFIDALA-TMKDEIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I ++ ++ ++ + +DG DEI+ +IKG G AL REKI+A A +FI I D
Sbjct: 60 L-KGFGITVYDLNEIDALSVYVDGADEINGTRDMIKGGGAALTREKIVAAVADKFICIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ +++ G N R V+D GN+I
Sbjct: 119 NTKTVDVLGTFPLPVEVIPMAREYVAREIRK----LGGNPVWREG------VVTDNGNHI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + +L I G + +GLF + D +IGT DG
Sbjct: 169 LDVKGMAITDAKGLEVQLNAIVGTVTNGLFAHRGADVVLIGTPDGVIT 216
>gi|329769228|ref|ZP_08260647.1| ribose 5-phosphate isomerase A [Gemella sanguinis M325]
gi|328839359|gb|EGF88939.1| ribose 5-phosphate isomerase A [Gemella sanguinis M325]
Length = 224
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/225 (39%), Positives = 129/225 (57%), Gaps = 6/225 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K + A++YV DGM +G+GTGST F+ LAD++ G +Q++ +S T K
Sbjct: 1 MNLKEVVGKEAVKYVEDGMIVGLGTGSTVFYFVHALADRVKEGLNIQMVSTSIQTVELAK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + E++ +DL++DG DEID IKG G AL REKI+A A I I DESK
Sbjct: 61 SLGLNIKELEEIDHIDLAVDGVDEIDKNFNAIKGGGAALFREKIVADIAKEVIWIYDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ LG+ LP+EI FG + T+ L E GLN + R+ + ++D NYIVD
Sbjct: 121 DVEKLGKFNLPVEILPFGYSHTVRKLTEA----GLNPVI--RKKDGEILITDNHNYIVDL 174
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
G+ D + + +L NI GV+EHGLF+NM I GT G ++
Sbjct: 175 HLGYGFDIEEVKEKLANIVGVVEHGLFLNMCKLCIKGTPGGAVII 219
>gi|56965115|ref|YP_176847.1| ribose-5-phosphate isomerase A [Bacillus clausii KSM-K16]
gi|67461329|sp|Q5WCM4|RPIA_BACSK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|56911359|dbj|BAD65886.1| ribose 5-phosphate isomerase A [Bacillus clausii KSM-K16]
Length = 228
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 8/230 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +KR AA A +YV DGM +G+G+GST EF+ +L +K G +Q + +SR TE
Sbjct: 1 MDQ--LKRMAAEAAAEYVKDGMKIGLGSGSTVFEFVRVLGEKAKEGLNIQAVAASRKTEA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + + ++++ DG DEI L L+KG GG+LLREK++A AA R +V+ D
Sbjct: 59 LAKACGIHIIDFPTMEKLEVAFDGADEIAPGLMLLKGGGGSLLREKLVAAAAKRLVVLAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V+ LG LP+EI FG T ++ L LR+ G FVSD N+I
Sbjct: 119 ESKLVEELGAFKLPVEIIPFGWETTAMRIEA------LGGVASLRQTGKSPFVSDNHNWI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+D FG I DP + ++ + GV+E GLF++M AI+ + +G + +
Sbjct: 173 LDCDFGNIRDPYSLHEKVKKLVGVVETGLFLDMACEAIVASKNGIHHITK 222
>gi|224125628|ref|XP_002319636.1| predicted protein [Populus trichocarpa]
gi|222858012|gb|EEE95559.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 134/235 (57%), Gaps = 7/235 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
++K+ AA +A++YV GM LG+GTGSTA + L + + G + +P+S+ TE
Sbjct: 55 TQDELKKIAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGELLKTGELTNIIGVPTSKRTE 114
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ +IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+ F+V+
Sbjct: 115 EQARSLNIPLSILDDHPHIDLAIDGADEVDPLLNLVKGRGGALLREKMVEAASDEFVVVA 174
Query: 120 DESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K VD + +P+E+ QF L L+E+ G+ +LR+ +G +V+D
Sbjct: 175 DETKLVDGLGGSKLAMPVEVVQFCWKFNLVRLQELFKDEGVEAKLRVGEDGK-PYVTDNF 233
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F I D E+ + GV+EHGLF++M II G V K
Sbjct: 234 NYIVDLYFENPIKDGYAAGKEISGLEGVVEHGLFLDMATAVIIAGKTG-VEVKSK 287
>gi|281492911|ref|YP_003354891.1| ribose 5-phosphate isomerase [Lactococcus lactis subsp. lactis
KF147]
gi|281376563|gb|ADA66049.1| Ribose 5-phosphate isomerase [Lactococcus lactis subsp. lactis
KF147]
Length = 224
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ +A ++V GM +G+GTGSTA F+ L +IA + + +S T +
Sbjct: 2 DNLKKQVGIKAAEFVKSGMVVGLGTGSTAAYFVEELGRRIAEEQLEITGVTTSNVTSSQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL++DG DEIDS L IKG G ALL EKI+A + +I I DES
Sbjct: 62 RALGIPLASIDEVDYVDLTVDGADEIDSSLNGIKGGGAALLMEKIVATYSKDYIWIVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K + LG +P+E+ +G + + G RL ++D ++I+D
Sbjct: 122 KLSENLGSFKIPVEVIPYGSQQVFKKFE----AAGYAPTWRLNEENE-RLITDMYHFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P+ ++ EL + GV+EHGLF NMV I+ ++G ++ K
Sbjct: 177 LHISQIKEPEKLAEELDLMVGVVEHGLFNNMVKKVIVAGNEG-VRIINK 224
>gi|310815309|ref|YP_003963273.1| ribose-5-phosphate isomerase A [Ketogulonicigenium vulgare Y25]
gi|308754044|gb|ADO41973.1| ribose-5-phosphate isomerase A [Ketogulonicigenium vulgare Y25]
Length = 269
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 129/227 (56%), Gaps = 2/227 (0%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
K +ARRA +V GM LG+GTGSTA + +L + G +++ +P+S T +
Sbjct: 20 AKFASARRASYFVEQGMRLGLGTGSTAFWLVRVLGHMVREQGLQIRAVPTSERTAEQARA 79
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
I + + +DV +DL+IDG DE D L LIKG GGA LREKI+A A+ R IVI D SK+
Sbjct: 80 EGIDVVTLQDVGWLDLTIDGADEFDPALNLIKGGGGAHLREKIVATASDRMIVISDASKQ 139
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEV-ASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
VD LG LP+EI FG T ++E + LR NG+ + +D GN I+D
Sbjct: 140 VDTLGAFPLPVEIVPFGWQATRHLIEESLLGVDVGARKSTLRMNGTQPYTTDEGNLIIDL 199
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I + + +S L I GV+E+GLF+++ D +IG DG V+
Sbjct: 200 HLSRIANARQLSLMLNQIAGVVENGLFVDICDTVVIGHPDGSDEVID 246
>gi|78485909|ref|YP_391834.1| ribose-5-phosphate isomerase A [Thiomicrospira crunogena XCL-2]
gi|123555236|sp|Q31FB3|RPIA_THICR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|78364195|gb|ABB42160.1| ribose-5-phosphate isomerase [Thiomicrospira crunogena XCL-2]
Length = 220
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 115/229 (50%), Gaps = 12/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A AI+YVV +G+GTGSTA F+ LA G + SS T
Sbjct: 1 MTQDELKQQVAIAAIEYVVPDTFIGVGTGSTANFFIDELAK--IKGKIKGAVASSEATAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H IP+ V + + IDG DE D +L LIKG GGAL REKI+ A +F+ I D
Sbjct: 59 RLKDHGIPVMELNSVDELSVYIDGADEADPKLNLIKGGGGALTREKIVLAVAKQFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK+V LG+ LPIE+ + + + FG LR F +D GN I
Sbjct: 119 DSKKVAVLGKFPLPIEVIPMARSYVAREVVKR---FGGEPVLREG------FTTDNGNVI 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP + EL I GV+ +GLF D + GT++G +
Sbjct: 170 LDIHGLEITDPVAMETELNGIVGVVTNGLFAARNADIFLCGTANGVETI 218
>gi|315165910|gb|EFU09927.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX1302]
Length = 226
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 128/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G + KE G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGSCPLVHLFKEK----GYHPALRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|253995660|ref|YP_003047724.1| ribose-5-phosphate isomerase A [Methylotenera mobilis JLW8]
gi|253982339|gb|ACT47197.1| ribose 5-phosphate isomerase [Methylotenera mobilis JLW8]
Length = 219
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 15/227 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A+ A++YV G +G+GTGSTA F+ LA K+ + + SS T
Sbjct: 4 TQDELKQQVAKAAVEYVKSG-IIGVGTGSTANFFIEELA-KVKHKID-GAVASSEATAQR 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ H I + V ++++ +DG DEI + ++KG GGAL REKI+A A +FI I D
Sbjct: 61 LRGHGIEVFDLNSVDNLEIYVDGADEITEHMHMLKGGGGALTREKIVAAVAKKFICICDA 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
+K V LG+ LP+E+ + G +LR F +D GN I+
Sbjct: 121 TKYVPVLGKFPLPVEVLPMAKSHVARE----LVKLGGQPQLRD-------FTTDNGNLIL 169
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
D I DP + ++ I GV+ +GLF + ++ T++G
Sbjct: 170 DVHGLTITDPVAMEAKINQIVGVVTNGLFAARPANVLLLATAEGVKT 216
>gi|270291206|ref|ZP_06197429.1| ribose 5-phosphate isomerase A [Pediococcus acidilactici 7_4]
gi|304385491|ref|ZP_07367836.1| ribose 5-phosphate isomerase A [Pediococcus acidilactici DSM 20284]
gi|270280602|gb|EFA26437.1| ribose 5-phosphate isomerase A [Pediococcus acidilactici 7_4]
gi|304328698|gb|EFL95919.1| ribose 5-phosphate isomerase A [Pediococcus acidilactici DSM 20284]
Length = 228
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 6/232 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
MD ++K+ A++++ DGMT+G+GTGST K + L ++ + +P+S T
Sbjct: 1 MDQNELKKLVGNEAVKFIEDGMTVGLGTGSTVKFMVDALGKRVKEENLNIVGVPTSDRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + S ++V +DL+IDG DEI S + IKG G A L EKI+A +S+ + I
Sbjct: 61 KQARDLGITVKSVDEVDHIDLTIDGADEISSDFQGIKGGGAAHLFEKIVATNSSKNMWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK VD LG LP+E+ +G + G N E R+ NG+ ++D NY
Sbjct: 121 DESKMVDKLGAFPLPLEVIPYGSKQVFKK----LEAKGFNPEFRMDENGNH-VLTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++D I DP ++ L G++E GLF++ V+ I+G DG ++ +
Sbjct: 176 VIDLHLHEIDDPHALADYLIKQVGIVEQGLFLDTVNTVIVGRQDGPEVLQAR 227
>gi|94311026|ref|YP_584236.1| ribose-5-phosphate isomerase A [Cupriavidus metallidurans CH34]
gi|93354878|gb|ABF08967.1| ribose 5-phosphate isomerase (CbbI) [Cupriavidus metallidurans
CH34]
Length = 228
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 114/230 (49%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A F V S
Sbjct: 1 MTQDELKALVAQAAADYVKQEVPEGAVLGVGTGSTANLFIDAVAA-FKERFSGAVSSSEA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+T + H + +V S+ + +DG DEID+ +IKG GGAL REKI+A A RF+
Sbjct: 60 STRRL-QQHGFNVLDLNEVDSIPVYVDGADEIDNSGAMIKGGGGALTREKIVASVADRFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V +G LP+E+ + G LR+ + G G++ +D
Sbjct: 119 CIADGSKLVPTMGAFPLPVEVIPMARAAVAR----SLAALGGQPRLRMTKEG-GIYKTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGE 225
GN I+D I +P+ + ++ +PGV+ GLF + + ++GT G
Sbjct: 174 GNVILDVSGLKIENPKALEQQINQLPGVVTVGLFALRGANVLLLGTEQGV 223
>gi|257084137|ref|ZP_05578498.1| ribose-5-phosphate isomerase A [Enterococcus faecalis Fly1]
gi|256992167|gb|EEU79469.1| ribose-5-phosphate isomerase A [Enterococcus faecalis Fly1]
Length = 226
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 87/226 (38%), Positives = 129/226 (57%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G + + +E G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGSCQLVHLFEEK----GYHPALRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|294677918|ref|YP_003578533.1| ribose 5-phosphate isomerase A [Rhodobacter capsulatus SB 1003]
gi|294476738|gb|ADE86126.1| ribose 5-phosphate isomerase A [Rhodobacter capsulatus SB 1003]
Length = 261
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 133/218 (61%), Gaps = 2/218 (0%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPE 73
+ +V DGM +G+GTGSTA + L +++ G R+ +P+S T + + I + +
Sbjct: 20 VDFVEDGMKVGLGTGSTAAWMVRCLGERVREEGLRIVGVPTSSRTADLARQIGISVVGLD 79
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
+ +DL+IDG DE D++L+LIKG GGALL+EKI+A A+ R IVI D SK V LG L
Sbjct: 80 EAKWLDLTIDGADEFDAQLQLIKGGGGALLQEKIVATASDRMIVITDASKEVVNLGAFPL 139
Query: 134 PIEIDQFGVNKTLSALKEVASC-FGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
P+E+ FG T + ++E+ L + LR NG+ +++D GNYIVD I + +
Sbjct: 140 PVEVVPFGWQTTRALIEEMLIATDVLGRQTTLRLNGTQPYITDEGNYIVDLHLNRIGNAR 199
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++ L IPGV+E+GLFI++ D IIG ++G+ +
Sbjct: 200 ALAVALNQIPGVVENGLFIDICDMVIIGGAEGQVELRD 237
>gi|258540886|ref|YP_003175385.1| ribose-5-phosphate isomerase A [Lactobacillus rhamnosus Lc 705]
gi|257152562|emb|CAR91534.1| Ribose-5-phosphate isomerase A [Lactobacillus rhamnosus Lc 705]
Length = 229
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 130/225 (57%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
MD ++K+ AA+RA ++V DGMT+G+GTGST + +A +I + + +S T
Sbjct: 1 MDQNKLKQEAAQRAAEFVEDGMTIGLGTGSTVFYLVEAIAKRIKEEHLSLNGVATSIRTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + V +DL+IDG DE+D + IKG G + L EKI+A ++R I I
Sbjct: 61 KQAESLGIPMKELDGVDKIDLTIDGADEVDKHFQGIKGGGRSHLIEKIVAINSARNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K VD LG+ LP+E+ FG K L L + GL RL +GS ++D NY
Sbjct: 121 DETKLVDTLGKFPLPLEVIPFGSGKLLQRLADE----GLKPAYRLNEDGSK-ALTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P +++ L G++EHGLF+++V ++GT+ G
Sbjct: 176 IIDLHLGRIEHPHLLAEWLNKQVGIVEHGLFLDLVKTVVVGTTHG 220
>gi|77748714|ref|NP_643718.2| ribose-5-phosphate isomerase A [Xanthomonas axonopodis pv. citri
str. 306]
gi|30173321|sp|Q8PH49|RPIA_XANAC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
Length = 215
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
+ DP + L IPGV+ GLF D I+G
Sbjct: 172 HLQVTDPVGLERSLNQIPGVVCVGLFARRPADVVIVGGE 210
>gi|152979527|ref|YP_001345156.1| ribose-5-phosphate isomerase A [Actinobacillus succinogenes 130Z]
gi|171704367|sp|A6VQH4|RPIA_ACTSZ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150841250|gb|ABR75221.1| ribose 5-phosphate isomerase [Actinobacillus succinogenes 130Z]
Length = 219
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AA+ A+Q+V +G+G+GST F+ L + +S+ +E
Sbjct: 1 MDQLEMKKMAAQAALQFVQPDSIVGVGSGSTVNCFIEALGAM--RDQIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVSS+D+ +DG DEI+ + +IKG G AL REKI+A FI I D
Sbjct: 59 LLRKQGIEVFSANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVASLTKNFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVARK----LVALGGSPEWRQG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F +N + I+GT +G ++
Sbjct: 169 ILDVHNFPIMNPPEMEKELNNVAGVVTNGIFALNAANTVIVGTPEGAKII 218
>gi|315612989|ref|ZP_07887900.1| ribose 5-phosphate isomerase A [Streptococcus sanguinis ATCC 49296]
gi|315315099|gb|EFU63140.1| ribose 5-phosphate isomerase A [Streptococcus sanguinis ATCC 49296]
Length = 227
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + K + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFKRAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|261253918|ref|ZP_05946491.1| ribose 5-phosphate isomerase A [Vibrio orientalis CIP 102891]
gi|260937309|gb|EEX93298.1| ribose 5-phosphate isomerase A [Vibrio orientalis CIP 102891]
Length = 218
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + + V S +TE
Sbjct: 1 MTQDEMKKEAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TMKEEIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V+ +D+ +DG DEI++ +IKG G AL REKI+A + +FI I D
Sbjct: 60 L-KELEIEVFDCNEVAGLDIYVDGADEINADREMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R +D GN I
Sbjct: 119 NTKAVDVLGEFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + ++ +PGV+ GLF + D I GT +G +
Sbjct: 169 LDVYGLKITNPKDLENKINALPGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|227893091|ref|ZP_04010896.1| ribose-5-phosphate isomerase [Lactobacillus ultunensis DSM 16047]
gi|227865069|gb|EEJ72490.1| ribose-5-phosphate isomerase [Lactobacillus ultunensis DSM 16047]
Length = 230
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 11/236 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSS 55
MD ++K+ AA +A + V GMTLG+GTGST F+ L + G +++ ++ +S
Sbjct: 1 MDKQEQDRLKKEAATKAAEMVESGMTLGVGTGSTVAFFIDALGKRKDEEGLKLKAIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + D+ DL++DG D + L IKG GGAL EK +A + +
Sbjct: 61 NRSKKQLESLGFKVSELADIDQADLTVDGADRVADNLDGIKGGGGALTLEKNVAINSKKI 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I DESK V L LP+E+ + ++ GL + R+ +G +++
Sbjct: 121 IWIVDESKLVHRLSGFPLPVEVLPISCEQNFKRFEQE----GLKPQWRM--DGDKRYITH 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GNYI+D IP P ++ L + GV+EHGLF++M D II SDG +K
Sbjct: 175 YGNYIIDLAVDPIPAPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKK 230
>gi|322388065|ref|ZP_08061671.1| ribose 5-phosphate isomerase [Streptococcus infantis ATCC 700779]
gi|321141086|gb|EFX36585.1| ribose 5-phosphate isomerase [Streptococcus infantis ATCC 700779]
Length = 227
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 126/228 (55%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VDL++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDLTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERASY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP + EL ++ GV+EHGLF MVD I+ +G ++
Sbjct: 176 LALEVIEDPIALGQELDHVVGVVEHGLFNQMVDKVIVAGQEGVQILTS 223
>gi|88807328|ref|ZP_01122840.1| ribose 5-phosphate isomerase [Synechococcus sp. WH 7805]
gi|88788542|gb|EAR19697.1| ribose 5-phosphate isomerase [Synechococcus sp. WH 7805]
Length = 238
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 126/228 (55%), Gaps = 9/228 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
QMK+ A A++ DGM +G+G+GSTA + L +++A G + + +S E
Sbjct: 5 QNQMKQAVADAAVEQFQDGMVVGLGSGSTAALMIKGLGERLAAGQLNDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RFIV+ D
Sbjct: 65 LAAELGIPLRSLNAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVAARADRFIVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K V+ L +LP+E+ +++ + G ELR+ +G V+D GN
Sbjct: 125 STKLVERLNLGFLLPVEVLPGAW----VQIRQQLNAMGGEAELRMATRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGE 225
++D F G I DP + ++ NIPGV+E+GLF+N+ D ++G DG
Sbjct: 181 VLDVRFEGGIADPVSLEKDINNIPGVLENGLFVNLADEVLVGQVDDGV 228
>gi|15642476|ref|NP_232109.1| ribose-5-phosphate isomerase A [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590765|ref|ZP_01678095.1| ribose-5-phosphate isomerase [Vibrio cholerae 2740-80]
gi|121729019|ref|ZP_01682021.1| ribose-5-phosphate isomerase [Vibrio cholerae V52]
gi|147675007|ref|YP_001217980.1| ribose-5-phosphate isomerase A [Vibrio cholerae O395]
gi|153214527|ref|ZP_01949436.1| ribose-5-phosphate isomerase [Vibrio cholerae 1587]
gi|153802833|ref|ZP_01957419.1| ribose-5-phosphate isomerase [Vibrio cholerae MZO-3]
gi|153819330|ref|ZP_01971997.1| ribose-5-phosphate isomerase [Vibrio cholerae NCTC 8457]
gi|153822865|ref|ZP_01975532.1| ribose-5-phosphate isomerase [Vibrio cholerae B33]
gi|153826967|ref|ZP_01979634.1| ribose-5-phosphate isomerase [Vibrio cholerae MZO-2]
gi|227082600|ref|YP_002811151.1| ribose-5-phosphate isomerase [Vibrio cholerae M66-2]
gi|229507462|ref|ZP_04396967.1| ribose 5-phosphate isomerase A [Vibrio cholerae BX 330286]
gi|229512343|ref|ZP_04401822.1| ribose 5-phosphate isomerase A [Vibrio cholerae B33]
gi|229514104|ref|ZP_04403566.1| ribose 5-phosphate isomerase A [Vibrio cholerae TMA 21]
gi|229519479|ref|ZP_04408922.1| ribose 5-phosphate isomerase A [Vibrio cholerae RC9]
gi|229521305|ref|ZP_04410725.1| ribose 5-phosphate isomerase A [Vibrio cholerae TM 11079-80]
gi|229527086|ref|ZP_04416481.1| ribose 5-phosphate isomerase A [Vibrio cholerae 12129(1)]
gi|229606967|ref|YP_002877615.1| ribose-5-phosphate isomerase A [Vibrio cholerae MJ-1236]
gi|254849604|ref|ZP_05238954.1| ribose-5-phosphate isomerase A [Vibrio cholerae MO10]
gi|255746851|ref|ZP_05420796.1| ribose 5-phosphate isomerase A [Vibrio cholera CIRS 101]
gi|262162016|ref|ZP_06031032.1| ribose 5-phosphate isomerase A [Vibrio cholerae INDRE 91/1]
gi|262167309|ref|ZP_06035019.1| ribose 5-phosphate isomerase A [Vibrio cholerae RC27]
gi|297581103|ref|ZP_06943028.1| ribose-5-phosphate isomerase [Vibrio cholerae RC385]
gi|298500165|ref|ZP_07009970.1| ribose 5-phosphate isomerase A [Vibrio cholerae MAK 757]
gi|30173384|sp|Q9KP93|RPIA_VIBCH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|172047578|sp|A5F5G0|RPIA_VIBC3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254765237|sp|C3LR22|RPIA_VIBCM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|9657059|gb|AAF95622.1| ribose-5-phosphate isomerase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547406|gb|EAX57519.1| ribose-5-phosphate isomerase [Vibrio cholerae 2740-80]
gi|121628701|gb|EAX61171.1| ribose-5-phosphate isomerase [Vibrio cholerae V52]
gi|124115329|gb|EAY34149.1| ribose-5-phosphate isomerase [Vibrio cholerae 1587]
gi|124121622|gb|EAY40365.1| ribose-5-phosphate isomerase [Vibrio cholerae MZO-3]
gi|126510111|gb|EAZ72705.1| ribose-5-phosphate isomerase [Vibrio cholerae NCTC 8457]
gi|126519602|gb|EAZ76825.1| ribose-5-phosphate isomerase [Vibrio cholerae B33]
gi|146316890|gb|ABQ21429.1| ribose-5-phosphate isomerase [Vibrio cholerae O395]
gi|149739165|gb|EDM53447.1| ribose-5-phosphate isomerase [Vibrio cholerae MZO-2]
gi|227010488|gb|ACP06700.1| ribose-5-phosphate isomerase [Vibrio cholerae M66-2]
gi|227014371|gb|ACP10581.1| ribose-5-phosphate isomerase [Vibrio cholerae O395]
gi|229335483|gb|EEO00965.1| ribose 5-phosphate isomerase A [Vibrio cholerae 12129(1)]
gi|229341837|gb|EEO06839.1| ribose 5-phosphate isomerase A [Vibrio cholerae TM 11079-80]
gi|229344168|gb|EEO09143.1| ribose 5-phosphate isomerase A [Vibrio cholerae RC9]
gi|229349285|gb|EEO14242.1| ribose 5-phosphate isomerase A [Vibrio cholerae TMA 21]
gi|229352308|gb|EEO17249.1| ribose 5-phosphate isomerase A [Vibrio cholerae B33]
gi|229354967|gb|EEO19888.1| ribose 5-phosphate isomerase A [Vibrio cholerae BX 330286]
gi|229369622|gb|ACQ60045.1| ribose 5-phosphate isomerase A [Vibrio cholerae MJ-1236]
gi|254845309|gb|EET23723.1| ribose-5-phosphate isomerase A [Vibrio cholerae MO10]
gi|255735253|gb|EET90653.1| ribose 5-phosphate isomerase A [Vibrio cholera CIRS 101]
gi|262024284|gb|EEY42975.1| ribose 5-phosphate isomerase A [Vibrio cholerae RC27]
gi|262028265|gb|EEY46922.1| ribose 5-phosphate isomerase A [Vibrio cholerae INDRE 91/1]
gi|297534929|gb|EFH73765.1| ribose-5-phosphate isomerase [Vibrio cholerae RC385]
gi|297540858|gb|EFH76912.1| ribose 5-phosphate isomerase A [Vibrio cholerae MAK 757]
gi|327484970|gb|AEA79377.1| Ribose 5-phosphate isomerase A [Vibrio cholerae LMA3894-4]
Length = 218
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +T
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDEIKGAVSSSIASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DVS +D+ +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNDVSELDIYVDGADEINPERDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I P+ + ++ I GV+ GLF + D I GT G +
Sbjct: 169 LDVYNMKITHPKDLESKINGIAGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|301773942|ref|XP_002922380.1| PREDICTED: ribose-5-phosphate isomerase-like [Ailuropoda
melanoleuca]
Length = 309
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 73 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 132
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 133 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 192
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 193 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVTQ---KFGGVIELRMAVNKAGPVVT 249
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 250 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 306
>gi|262192695|ref|ZP_06050835.1| ribose 5-phosphate isomerase A [Vibrio cholerae CT 5369-93]
gi|262031434|gb|EEY50032.1| ribose 5-phosphate isomerase A [Vibrio cholerae CT 5369-93]
Length = 218
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +T
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDEIKGAVSSSIASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DVS +D+ +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNDVSELDIYVDGADEINPERDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I P+ + ++ I GV+ GLF + D I GT G +
Sbjct: 169 LDVHNMKITHPKDLETKINGIAGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|270292916|ref|ZP_06199127.1| ribose 5-phosphate isomerase [Streptococcus sp. M143]
gi|270278895|gb|EFA24741.1| ribose 5-phosphate isomerase [Streptococcus sp. M143]
Length = 227
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGSEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|315171469|gb|EFU15486.1| ribose 5-phosphate isomerase A [Enterococcus faecalis TX1342]
Length = 226
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 87/226 (38%), Positives = 128/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VDL+IDG DEI + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKSIDEVPYVDLTIDGADEISVDFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G + + +E G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGSCQLVHLFEEK----GYHPTLRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|326407864|gb|ADZ64935.1| ribose 5-phosphate isomerase A [Lactococcus lactis subsp. lactis
CV56]
Length = 224
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ +A ++V GM +G+GTGSTA F+ L +IA + + +S T +
Sbjct: 2 DNLKKQVGIKAAEFVKSGMVVGLGTGSTAAYFVEELGRRIAEEQLEITGVTTSNVTSSQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL++DG DEIDS L IKG G ALL EKI+A + +I I DES
Sbjct: 62 RALGIPLASIDEVDYVDLTVDGADEIDSSLNGIKGGGAALLMEKIVATYSKDYIWIVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K + LG +P+E+ +G + + G RL ++D ++I+D
Sbjct: 122 KLSENLGFFKIPVEVIPYGSQQVFKKFE----AAGYAPTWRLNEENE-RLITDMHHFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P+ ++ EL + GV+EHGLF NMV I+ ++G ++ K
Sbjct: 177 LHISQIKEPEKLAEELDLMVGVVEHGLFNNMVKKVIVAGNEG-VRIINK 224
>gi|119510229|ref|ZP_01629366.1| ribose-5-phosphate isomerase A [Nodularia spumigena CCY9414]
gi|119465078|gb|EAW45978.1| ribose-5-phosphate isomerase A [Nodularia spumigena CCY9414]
Length = 236
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 128/229 (55%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L D+I +G + IP+S +E K
Sbjct: 11 MKQEVGKAAAALVKSGSIVGLGTGSTTAYTIQFLGDRIKSGELKDIVGIPTSFQSEVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + V +D++IDG DE+D + LIKG G A REK++ + A +FIV+ D K
Sbjct: 71 EYGVPLTTLDAVDHIDIAIDGADEVDPQKNLIKGGGAAHTREKVVDYLAEQFIVVVDSGK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V+ +P+E+ + +A+K+ G ELR+ +G ++D GN+++D
Sbjct: 131 LVERLGSTFAVPVEVIPMAITPVTNAIKK----LGGKPELRMGVRKAGPVITDQGNFVLD 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + L NIPGV+E+G+F+N VD ++G DG+ LV Q
Sbjct: 187 VRFDSIDDPVNLEKTLNNIPGVLENGIFVNCVDVVLVGEVIDGQPLVRQ 235
>gi|312881737|ref|ZP_07741514.1| ribose-5-phosphate isomerase A [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370627|gb|EFP98102.1| ribose-5-phosphate isomerase A [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 218
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ MK+ A A++YV G +G+GTGST F+ L + I + + V S +TE
Sbjct: 1 MNQDDMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDAL-ETIKDDIKGAVSSSVASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +D+ +DG DEI+ + +IKG G AL REKI+A + +FI I D
Sbjct: 60 L-KSFGIEVFECNDVIKLDIYVDGADEINPQRHMIKGGGAALTREKIVAAISEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG LP+E+ + + + G + R ++D GN I
Sbjct: 119 DTKAVDVLGDFPLPVEVIPMARSYVAREIVK----LGGDPAYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I DP+ + + I GV+ GLF + D I GT +G +
Sbjct: 169 LDIYGLKITDPKALEERINAISGVVTVGLFAHRGADVIITGTPEGARI 216
>gi|293391742|ref|ZP_06636076.1| ribose 5-phosphate isomerase A [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952276|gb|EFE02395.1| ribose 5-phosphate isomerase A [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 218
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AA+ A+Q+V M +G+G+GST F+ L + +S+ +E
Sbjct: 1 MDQLEMKKIAAQAALQFVKPEMIVGVGSGSTVNCFIEALGAL--KNQIKGAVAASKKSEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVS +D+ +DG DEI+ + +IKG G AL REKI+A A FI I D
Sbjct: 59 LLRQQGIEVFSTNDVSGLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKNFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LPIE+ ++ G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPIEVIPMARSQVARK----LVALGGAPEYREG------VVTDNGNI 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL +I GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFEIMNPVAMEKELNDIAGVVTNGIFALRSADTVIVGTPNGAKII 218
>gi|284801307|ref|YP_003413172.1| hypothetical protein LM5578_1057 [Listeria monocytogenes 08-5578]
gi|284994449|ref|YP_003416217.1| hypothetical protein LM5923_1011 [Listeria monocytogenes 08-5923]
gi|284056869|gb|ADB67810.1| hypothetical protein LM5578_1057 [Listeria monocytogenes 08-5578]
gi|284059916|gb|ADB70855.1| hypothetical protein LM5923_1011 [Listeria monocytogenes 08-5923]
Length = 224
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 129/227 (56%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ FG + L++ L ++ ++V++ GNYI+D
Sbjct: 123 VRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLR-----NQSSGEVYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D ++ +L IPG++EHGLF++ VD I ++GE +++K
Sbjct: 178 NQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK 224
>gi|227519982|ref|ZP_03950031.1| ribose-5-phosphate isomerase A [Enterococcus faecalis TX0104]
gi|227072530|gb|EEI10493.1| ribose-5-phosphate isomerase A [Enterococcus faecalis TX0104]
Length = 226
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 128/226 (56%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D+S
Sbjct: 61 LALGIPLKGIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ +G + + +E G + LRL G ++DGG++I+D
Sbjct: 121 KMVDDLGAFPLPVEVVPYGSCQLVHLFEEK----GYHPALRLNAAGET-LITDGGHHIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LHLEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 221
>gi|170719502|ref|YP_001747190.1| ribose-5-phosphate isomerase A [Pseudomonas putida W619]
gi|229470490|sp|B1J2A2|RPIA_PSEPW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|169757505|gb|ACA70821.1| ribose 5-phosphate isomerase [Pseudomonas putida W619]
Length = 224
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ +++ +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDEKSVVGVGTGSTANFFIDALAQH--KTAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D+ L LIKG G AL REKI+A A FI
Sbjct: 59 ATAQRLKGHGIPVYELNSVSELEFYVDGADESDAHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R V+D
Sbjct: 119 CIADASKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
GN I+D + I +P + ++ I GV+ +GLF D ++GT +G
Sbjct: 169 GNVILDVYNLQITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTPEGVK 219
>gi|171057741|ref|YP_001790090.1| ribose-5-phosphate isomerase A [Leptothrix cholodnii SP-6]
gi|238689106|sp|B1Y3C2|RPIA_LEPCP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|170775186|gb|ACB33325.1| ribose 5-phosphate isomerase [Leptothrix cholodnii SP-6]
Length = 220
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K + A+ YV DG +G+GTGST F+ LA I + V S R+TE
Sbjct: 1 MTQDELKALVGQAAVAYVPDGSVVGVGTGSTVNCFIDALAA-IKDRIAGAVSSSVRSTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP+ V + + IDG DEID R +IKG G AL REKI+A A RF+ I D
Sbjct: 60 LQAL-GIPVLDLSQVERIPVYIDGADEIDPRGHMIKGGGAALTREKIVADLAERFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SKRVD +GR LP+E+ + + +G +R V+D GN I
Sbjct: 119 ASKRVDVMGRFPLPVEVIPMAAAQVARRF---GAAYGGLARVREG------VVTDNGNLI 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
+D I DP + E+ PGV+ G+F ++GT +G +
Sbjct: 170 LDVTGLHIADPLAMETEVNQWPGVVCVGIFARHKAAVCLLGTPEGVRTL 218
>gi|163802940|ref|ZP_02196827.1| ribose-5-phosphate isomerase A [Vibrio sp. AND4]
gi|159173230|gb|EDP58058.1| ribose-5-phosphate isomerase A [Vibrio sp. AND4]
Length = 218
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-SIKDDIKGAVSSSIASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DV+ +D+ +DG DEI++ +IKG G AL REKI+A + +FI I D
Sbjct: 60 LKAL-GIEVYECNDVAMLDIYVDGADEINAAREMIKGGGAALTREKIVAALSEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R +D GN I
Sbjct: 119 GTKAVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I +P+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHNMQITNPRELEDKINAIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|331266557|ref|YP_004326187.1| ribose-5-phosphate isomerase A [Streptococcus oralis Uo5]
gi|326683229|emb|CBZ00847.1| ribose-5-phosphate isomerase A [Streptococcus oralis Uo5]
Length = 227
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMRNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|315179100|gb|ADT86014.1| ribose-5-phosphate isomerase A [Vibrio furnissii NCTC 11218]
Length = 218
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-SIKDDIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV+ +D+ +DG DEI+ +IKG G AL REKI+A A +FI I D
Sbjct: 60 LKGL-GIEVFDCNDVAGLDVYVDGADEINPHREMIKGGGAALTREKIVAAIADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGGFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VLTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + ++ I GV+ +GLF + D I GT +G +
Sbjct: 169 LDVHNMRITDAKDLESKINAIAGVVTNGLFAHRGADVVITGTPEGAKI 216
>gi|223995243|ref|XP_002287305.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976421|gb|EED94748.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 276
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
++K+ +++ YV GM +G+GTGSTA + L +K+ +G + IP+S T
Sbjct: 37 SQDELKKMVGYKSVDDYVKSGMVVGLGTGSTAYFAVERLGEKLKSGELKDIVAIPTSVRT 96
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + + S +D++IDG DE+D L L+KG GGALLREK++ A +FIVI
Sbjct: 97 KEQAEELGIPLVTLDTHSKLDVAIDGADEVDPDLNLVKGGGGALLREKMVEVCADKFIVI 156
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR------RNGSGL 171
DESK D LP+EI F TL+ + + SC G LR+ +G +
Sbjct: 157 VDESKLCDGLGPGFPLPVEITPFCHIHTLNTIAALPSCAGCKAVLRMGSSSTNKPDGDEI 216
Query: 172 FVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
V+D GNYIVD F I D ++ EL N GV++HGLF M II SDG
Sbjct: 217 AVTDNGNYIVDLHFTEPIKDAPTMAKELKNTVGVVDHGLFCGMTTAVIIAGSDG 270
>gi|281339174|gb|EFB14758.1| hypothetical protein PANDA_011352 [Ailuropoda melanoleuca]
Length = 304
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 69 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 128
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 129 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 188
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 189 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVTQ---KFGGVIELRMAVNKAGPVVT 245
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 246 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 302
>gi|254491938|ref|ZP_05105117.1| ribose 5-phosphate isomerase A [Methylophaga thiooxidans DMS010]
gi|224463416|gb|EEF79686.1| ribose 5-phosphate isomerase A [Methylophaga thiooxydans DMS010]
Length = 220
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+A +MK+ AA A++Y+ +G+GTGST F+ LA G + SS +
Sbjct: 1 MNADEMKKQAAWAALEYIKGDGIVGVGTGSTVNHFIDALAT--IKGRIEGAVSSSEASTK 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + + +++ +DG DE +S L L+KG GGAL REKIIA A+ +F+ I D
Sbjct: 59 KMQELGIKVFDLNECNEIEVYVDGADEANSLLELVKGGGGALTREKIIAAASKQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG+ LP+E+ + + + G R ++D GN I
Sbjct: 119 ATKQVDILGKFPLPVEVIPMARSYVAREIVK----LGGQPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQK 231
+D I +P + L +I GV+ +GLF D ++G+ DG V K
Sbjct: 169 LDVHGMDIMEPIKLEKTLNDIVGVVTNGLFAMRPADVLLVGSEDGTQTVHAK 220
>gi|322374479|ref|ZP_08048993.1| ribose 5-phosphate isomerase A [Streptococcus sp. C300]
gi|321279979|gb|EFX57018.1| ribose 5-phosphate isomerase A [Streptococcus sp. C300]
Length = 227
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + K + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFKRAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGKELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|104784153|ref|YP_610651.1| ribose-5-phosphate isomerase A [Pseudomonas entomophila L48]
gi|122401398|sp|Q1I3B8|RPIA_PSEE4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|95113140|emb|CAK17868.1| ribose 5-phosphate isomerase [Pseudomonas entomophila L48]
Length = 224
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDQLKQAVAQAAVDLILPKLDEKSVVGVGTGSTANFFIDALAQH--KTAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D+ L LIKG G AL REKI+A A FI
Sbjct: 59 ATAQRLKGHGIPVYELNSVSELEFYVDGADESDAHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R V+D
Sbjct: 119 CIADASKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNVILDVHNLQITNPVELESQINAIVGVVTNGLFAARPADVLLLGTAEGVKTL 221
>gi|78213587|ref|YP_382366.1| ribose-5-phosphate isomerase [Synechococcus sp. CC9605]
gi|123729670|sp|Q3AHX1|RPIA_SYNSC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|78198046|gb|ABB35811.1| ribose 5-phosphate isomerase [Synechococcus sp. CC9605]
Length = 239
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 86/233 (36%), Positives = 131/233 (56%), Gaps = 9/233 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A++ + DGM LG+G+GSTA + L K+A+G + + +S E
Sbjct: 5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIQGLGAKLASGELKDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+IPL S VS +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELNIPLLSLNAVSRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ +K+ G + ELR+ + +G V+D GN
Sbjct: 125 STKLVDRLNLGFLLPVEVLPGAW----RQVKQQLEALGGSAELRMAQRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
++DA G I DP + + NIPGV+E+GLF+N+ D ++G +DG V
Sbjct: 181 VLDAKLDGGISDPVALEQTINNIPGVLENGLFVNITDEVLVGEITDGVAGVRS 233
>gi|46199236|ref|YP_004903.1| ribose 5-phosphate isomerase [Thermus thermophilus HB27]
gi|67461461|sp|Q72J47|RPIA_THET2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|46196861|gb|AAS81276.1| ribose 5-phosphate isomerase [Thermus thermophilus HB27]
Length = 227
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 102/225 (45%), Positives = 130/225 (57%), Gaps = 9/225 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKI 64
K+ AA AI YV DGM +G+GTGSTA+ ++ LA ++ G V +P+SR TE K
Sbjct: 9 KKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAKR 68
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL VDL+IDG DEI L LIKG GGALLREKI+ AA FIVI D +K+
Sbjct: 69 EGIPLVDLPP-EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERAAKEFIVIADHTKK 127
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LGRG +P+EI FG TL A+ + L E LR +G + +DGG+ I D
Sbjct: 128 VPVLGRGPVPVEIVPFGYRATLKAIAD------LGGEPELRMDGDEFYFTDGGHLIADCR 181
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FG I DP + L IPGV+E GLF+ M A++ G +L
Sbjct: 182 FGPIGDPLGLHRALLEIPGVVETGLFVGMATRALVAGPFGVEELL 226
>gi|91229536|ref|ZP_01262933.1| ribose-5-phosphate isomerase A [Vibrio alginolyticus 12G01]
gi|254230210|ref|ZP_04923602.1| ribose 5-phosphate isomerase A [Vibrio sp. Ex25]
gi|262393253|ref|YP_003285107.1| ribose 5-phosphate isomerase A [Vibrio sp. Ex25]
gi|269965768|ref|ZP_06179865.1| Ribose-5-phosphate isomerase A [Vibrio alginolyticus 40B]
gi|91187387|gb|EAS73743.1| ribose-5-phosphate isomerase A [Vibrio alginolyticus 12G01]
gi|151937242|gb|EDN56108.1| ribose 5-phosphate isomerase A [Vibrio sp. Ex25]
gi|262336847|gb|ACY50642.1| ribose 5-phosphate isomerase A [Vibrio sp. Ex25]
gi|269829636|gb|EEZ83873.1| Ribose-5-phosphate isomerase A [Vibrio alginolyticus 40B]
Length = 218
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDDIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I ++ DV +D+ +DG DEI+ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 L-KELGIEVYECNDVMKLDVYVDGADEINPAREMIKGGGAALTREKIVAAISDKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R V+D GN I
Sbjct: 119 GTKAVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I +P+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHNMQITNPKEMEDKINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|328474104|gb|EGF44909.1| ribose-5-phosphate isomerase A [Vibrio parahaemolyticus 10329]
Length = 218
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDDIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +D+ +DG DEI+ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 L-KELGIEVFECNDVIKLDVYVDGADEINPAREMIKGGGAALTREKIVAAISEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG+ LP+E+ + G + R V+D GN I
Sbjct: 119 DTKAVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I +P+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHNMQITNPKEMEDKINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|257870506|ref|ZP_05650159.1| ribose-5-phosphate isomerase A [Enterococcus gallinarum EG2]
gi|257804670|gb|EEV33492.1| ribose-5-phosphate isomerase A [Enterococcus gallinarum EG2]
Length = 224
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 122/222 (54%), Gaps = 6/222 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K A YV DGM +G+GTGSTA + L ++ + +P+S ++
Sbjct: 1 MNLKEMVGIEAASYVTDGMVVGLGTGSTAYYMIEELGRRVKEENLSIVGVPTSWASKKQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IP+ + ++V+SVDL+IDG DEI IKG G ALL EKI+A + + + I D+S
Sbjct: 61 ESLGIPVKTIDEVASVDLTIDGADEISGDYHGIKGGGAALLFEKIVATYSKKVLWIVDKS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ +G + + E + LRL +G+ +D G+YI+D
Sbjct: 121 KIVEKLGAFPLPVEVIPYGSQQLMRLFTEK----NYHPVLRLAEDGT-PLKTDCGHYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I +P ++ EL GV+EHGLF++MV IIG DG
Sbjct: 176 LHLQTINEPVALAHELDQTVGVVEHGLFLDMVHTIIIGQEDG 217
>gi|322516724|ref|ZP_08069633.1| ribose 5-phosphate isomerase [Streptococcus vestibularis ATCC
49124]
gi|322124757|gb|EFX96195.1| ribose 5-phosphate isomerase [Streptococcus vestibularis ATCC
49124]
Length = 240
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 128/232 (55%), Gaps = 6/232 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
M ++K+ A A +V DGM +G+GTGSTA F+ + +I G V + +S T
Sbjct: 13 MCMEELKKLAGVSAASFVGDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSSQTT 72
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL S +D+ S+D+++DG DE+D +L IKG GGALL EKI+A +I +
Sbjct: 73 KQAEGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKEYIWVV 132
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V+ LG LP+E+ Q+G ++ + G R+ G FV+D N+
Sbjct: 133 DESKMVEQLGAFKLPVEVVQYGADRLYRVFESK----GYKPSFRVTEQGD-RFVTDMKNF 187
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D G I +P + EL + GV++HGLF MV+ I+ DG +V K
Sbjct: 188 IIDLDLGKINNPVALGDELKAMTGVVDHGLFNGMVNKVIVAGKDGVKIVDAK 239
>gi|319947146|ref|ZP_08021380.1| ribose 5-phosphate isomerase [Streptococcus australis ATCC 700641]
gi|319747194|gb|EFV99453.1| ribose 5-phosphate isomerase [Streptococcus australis ATCC 700641]
Length = 226
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 7/227 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+K +A ++V DGM +G+GTGSTA F+ L +I G ++ + +S T +
Sbjct: 4 NLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVAELGRRIKEEGLKITAVTTSSVTYEQAE 63
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + +DV VDL++DG DE+D L IKG GGALL EKI+A + I I DESK
Sbjct: 64 GLGIPLKAIDDVEVVDLTVDGADEVDPALNGIKGGGGALLMEKIVATNSKDCIWIVDESK 123
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+V+ LG LP+E+ Q+G ++ E+ R FV+D GN+I+D
Sbjct: 124 QVETLGAFKLPVEVVQYGAENLFRHFEKKGYSPAYREKDGQR------FVTDQGNFIIDL 177
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
IPD + ++ EL GV++HGLF+ MV I+GT +G ++ +
Sbjct: 178 DLKVIPDAEALAEELDRTVGVVDHGLFLGMVSKVIVGTPEGPKIISK 224
>gi|229551365|ref|ZP_04440090.1| ribose-5-phosphate isomerase [Lactobacillus rhamnosus LMS2-1]
gi|229315324|gb|EEN81297.1| ribose-5-phosphate isomerase [Lactobacillus rhamnosus LMS2-1]
Length = 240
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 130/225 (57%), Gaps = 6/225 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
MD ++K+ AA+RA ++V DGMT+G+GTGST + +A +I + + +S T
Sbjct: 12 MDQNKLKQEAAQRAAEFVEDGMTIGLGTGSTVFYLVEAIAKRIKEEHLSLNGVATSIRTR 71
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + V +DL+IDG DE+D + IKG G + L EKI+A ++R I I
Sbjct: 72 KQAESLGIPMKELDGVDKIDLTIDGADEVDKHFQGIKGGGRSHLIEKIVAINSARNIWIV 131
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+K VD LG+ LP+E+ FG K L L + GL RL +GS ++D NY
Sbjct: 132 DETKLVDTLGKFPLPLEVIPFGSGKLLQRLADE----GLKPAYRLNEDGSK-ALTDSKNY 186
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I+D G I P +++ L G++EHGLF+++V ++GT+ G
Sbjct: 187 IIDLHLGRIEHPHLLAEWLNKQVGIVEHGLFLDLVKTVVVGTTHG 231
>gi|78184178|ref|YP_376613.1| ribose-5-phosphate isomerase A [Synechococcus sp. CC9902]
gi|123729948|sp|Q3AZA8|RPIA_SYNS9 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|78168472|gb|ABB25569.1| ribose-5-phosphate isomerase [Synechococcus sp. CC9902]
Length = 239
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 83/233 (35%), Positives = 129/233 (55%), Gaps = 9/233 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK A A++ + DGM LG+G+GSTA + L K+A+G + + +S E
Sbjct: 5 QTQMKHAVADAAVEQIKDGMVLGLGSGSTAALMIRALGAKLASGELKNIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELNIPLLSLNAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVAAMADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ +++ + G + ELR+ + +G V+D GN
Sbjct: 125 STKLVDRLNLDFLLPVEVLPGAW----RQIQKTLAAMGGSAELRMAQRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
++D G I DP + + N+PGV+E+GLF+N+ D ++G SDG V
Sbjct: 181 VLDVKLEGGITDPASLEKAINNVPGVLENGLFVNLTDEVLVGEISDGVAGVRS 233
>gi|119386376|ref|YP_917431.1| ribose 5-phosphate isomerase [Paracoccus denitrificans PD1222]
gi|119376971|gb|ABL71735.1| ribose-5-phosphate isomerase [Paracoccus denitrificans PD1222]
Length = 241
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 125/217 (57%), Gaps = 2/217 (0%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
V GM LG+GTGSTA F+ LA ++ GF ++ +S+ T + + +++
Sbjct: 21 LVEPGMRLGLGTGSTAAIFVRRLAQRVSEEGFALRCAATSKATAELATSLGLGVEELDEI 80
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+DL+IDG DE+D L LIKG G A LREKI+A A+ R +VI D+ K VD LG+ LP+
Sbjct: 81 GWLDLTIDGADEVDPDLNLIKGGGAAHLREKIVATASERMVVIADQGKVVDRLGQFHLPV 140
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELR-LRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
E+ FG T ++ L + LR+ G +D GN I+D IPD + +
Sbjct: 141 EVIPFGWQATRKLIQRALDRLDLTQRPILLRKRGDAPLRTDEGNLILDLALEAIPDAEAL 200
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ EL +I GV+EHGLF+N+ + AIIG DG + L++
Sbjct: 201 AAELSSIAGVVEHGLFLNICELAIIGCPDGSVVELRR 237
>gi|254292115|ref|ZP_04962889.1| ribose-5-phosphate isomerase [Vibrio cholerae AM-19226]
gi|150421983|gb|EDN13956.1| ribose-5-phosphate isomerase [Vibrio cholerae AM-19226]
Length = 218
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +T
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDEIKGAVSSSIASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DVS +D+ +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNDVSELDIYVDGADEINPERDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I P+ + ++ I GV+ GLF + D I GT G +
Sbjct: 169 LDVYNMKITHPKDLESKINCIAGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|328958140|ref|YP_004375526.1| ribose 5-phosphate isomerase [Carnobacterium sp. 17-4]
gi|328674464|gb|AEB30510.1| ribose 5-phosphate isomerase [Carnobacterium sp. 17-4]
Length = 223
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 129/225 (57%), Gaps = 5/225 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ +A +YV DGM +G+GTGSTA + L ++ G + + +S T+ +
Sbjct: 1 MNLKQLVGEKAAEYVTDGMVVGLGTGSTAYYMVEALGKRVKEGLSITGVTTSTRTKEQAE 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + ++V VD++IDG DEID+ + +KG GGALL EKI+A + + I I DESK
Sbjct: 61 QLGIPLKTIDEVEKVDVTIDGADEIDAHYQGVKGGGGALLFEKIVADYSKKVIWIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ LG LPIE+ +G + + E G +R G +++DGG+YI+D
Sbjct: 121 MVETLGAFPLPIEVLPYGSQQLMRIFDEK----GFLPSMRKSETGEN-YLTDGGHYIIDL 175
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DPQ ++ L + GV+EHGLF++ V+ I+G G ++
Sbjct: 176 HMAKIEDPQSLALWLDGLTGVMEHGLFLDRVNTIIVGRESGLEII 220
>gi|260817553|ref|XP_002603650.1| hypothetical protein BRAFLDRAFT_268634 [Branchiostoma floridae]
gi|229288972|gb|EEN59661.1| hypothetical protein BRAFLDRAFT_268634 [Branchiostoma floridae]
Length = 248
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 1 MDA-LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRN 57
MD Q K++AA +AI +V +G LG+G+GST + LA+++ V +P+S
Sbjct: 1 MDLITQAKQSAAYQAIDNHVKNGQALGIGSGSTIVFAINRLAERVQEENLNVVCVPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
++ + + E S+D++IDG DE+D L LIKG G A +EKI+A A F+V
Sbjct: 61 SKQLLTEKGLAVSDLERTPSLDVAIDGADEVDKDLNLIKGGGAACTQEKIVASCAKYFVV 120
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K + +PIE+ G + A+++ G ELR+ N +G V+
Sbjct: 121 IADHRKDSKLLGEQWKKGVPIEVIPMGYVPVIRAIEK---KLGGKAELRMGANKAGPVVT 177
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F D + ++ E+ IPGV+E GLFI+M A G DG +K
Sbjct: 178 DNGNFILDWKFDETKDWKKVNMEISMIPGVVETGLFIDMAQRAYFGMPDGSVTFREK 234
>gi|322385142|ref|ZP_08058789.1| ribose 5-phosphate isomerase [Streptococcus cristatus ATCC 51100]
gi|321270766|gb|EFX53679.1| ribose 5-phosphate isomerase [Streptococcus cristatus ATCC 51100]
Length = 225
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ETLKKLAGIKAAEFVEDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
IPL S ++V VD+++DG DE+D + IKG GGALL EK++A + +I + DES
Sbjct: 62 DGLGIPLKSIDEVDQVDVTVDGADEVDPQFNGIKGGGGALLMEKVVATPSKDYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG LP+E+ Q+G + + + R F++D N+I+D
Sbjct: 122 KLVQKLGAFKLPVEVVQYGAEQVFRHFAQAGY------KPSFREKNGQRFITDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P EL +I GV+EHGLF MV+ I+ G +L+
Sbjct: 176 LDLGVIENPVEFGRELDHIVGVVEHGLFTKMVNKVIVAGQ-GGVNILE 222
>gi|300312758|ref|YP_003776850.1| ribose 5-phosphate isomerase [Herbaspirillum seropedicae SmR1]
gi|300075543|gb|ADJ64942.1| ribose 5-phosphate isomerase protein [Herbaspirillum seropedicae
SmR1]
Length = 223
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 120/229 (52%), Gaps = 9/229 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ AI+YVVDG +G+GTGSTA F+ L KI + + + SS T
Sbjct: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELG-KIKHRIK-GAVASSEATAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + +V ++ + IDG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 59 RLRSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ LG+ LP+E+ L L E RLR V+D G YI
Sbjct: 119 GSKLVEVLGKFPLPVEVIPMSHAVVARKLAA------LGGEPRLRVKDGKPVVTDNGCYI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP + ++ NI GV+ +GLF + ++GT+DG +
Sbjct: 173 IDVLGLSITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKL 221
>gi|146309237|ref|YP_001189702.1| ribose-5-phosphate isomerase A [Pseudomonas mendocina ymp]
gi|145577438|gb|ABP86970.1| ribose-5-phosphate isomerase [Pseudomonas mendocina ymp]
Length = 237
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 18/236 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ +++ +G+GTGSTA F+ LA + + SS
Sbjct: 15 MTQDQLKQAVAQAAVDHILPRLDSKSIVGVGTGSTANFFIDALARHKMD--FDGAVASSE 72
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D RL LIKG G AL REKI+A A FI
Sbjct: 73 ATAARLKGHGIPVYDLNSVSELEFYVDGADESDERLHLIKGGGAALTREKIVAAVAKTFI 132
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 133 CIADASKLVPVLGAFPLPVEVIPMARSHVARE----LVKLGGDPVYREG------VLTDN 182
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
GN I+D I DP + ++ I GV+ +GLF D ++GT++G L++
Sbjct: 183 GNVILDVHNLSITDPVKLEADINAIVGVVTNGLFAARPADLLLLGTAEG-VKTLKR 237
>gi|312862841|ref|ZP_07723081.1| ribose 5-phosphate isomerase A [Streptococcus vestibularis F0396]
gi|311101701|gb|EFQ59904.1| ribose 5-phosphate isomerase A [Streptococcus vestibularis F0396]
Length = 226
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 128/229 (55%), Gaps = 6/229 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A RA +V DGM +G+GTGSTA F+ + +I G V + +S T
Sbjct: 2 EELKKLAGVRAASFVGDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSSQTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+D+++DG DE+D +L IKG GGALL EKI+A +I + DES
Sbjct: 62 EGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ + G RL G FV+D N+I+D
Sbjct: 122 KMVEQLGAFKLPVEVVQYGADRLYRVFESK----GYKPSFRLTEQGD-RFVTDMKNFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV++HGLF MV+ I+ DG +V K
Sbjct: 177 LDLGKINNPVALGDELKAMTGVVDHGLFNGMVNKVIVAGKDGVKIVEVK 225
>gi|55823046|ref|YP_141487.1| ribose-5-phosphate isomerase A [Streptococcus thermophilus
CNRZ1066]
gi|67461282|sp|Q5LZM5|RPIA_STRT1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|55739031|gb|AAV62672.1| ribose 5-phosphate isomerase [Streptococcus thermophilus CNRZ1066]
Length = 226
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 127/229 (55%), Gaps = 6/229 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +V DGM +G+GTGSTA F+ + +I G V + +S T
Sbjct: 2 DELKKLAGVYAAGFVEDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSSQTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+D+++DG DE+D +L IKG GGALL EKI+A ++I + DES
Sbjct: 62 EGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ G R+ G FV+D N+I+D
Sbjct: 122 KMVDQLGAFKLPVEVVQYGADRLY----LDFESKGYKPSFRVTEQGD-RFVTDMKNFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV+EHGLF MV+ I+ DG +V K
Sbjct: 177 LDLGKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKIVEVK 225
>gi|314937602|ref|ZP_07844928.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133a04]
gi|314942899|ref|ZP_07849712.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133C]
gi|314947965|ref|ZP_07851369.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0082]
gi|314950882|ref|ZP_07853951.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133A]
gi|314991470|ref|ZP_07856947.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133B]
gi|314995009|ref|ZP_07860129.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133a01]
gi|313590735|gb|EFR69580.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133a01]
gi|313593950|gb|EFR72795.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133B]
gi|313596891|gb|EFR75736.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133A]
gi|313598371|gb|EFR77216.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133C]
gi|313642979|gb|EFS07559.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0133a04]
gi|313645563|gb|EFS10143.1| ribose 5-phosphate isomerase A [Enterococcus faecium TX0082]
Length = 231
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 8/232 (3%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNT 58
MDA + +K+ A A ++V DGM +G+GTGSTA + + ++ G R+ + +S T
Sbjct: 1 MDAKMNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNAT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + I I
Sbjct: 61 KEQAEKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D SK VD LG+ LP+E+ +G + L +E L + + +DGG+
Sbjct: 121 VDSSKLVDKLGKFPLPVEVIPYGSQQLLHIFEEKRFQPVLRTD-----ENGEVLTTDGGH 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
YI+D I P+ ++ L + GV+EHGLF+NMV ++G+ G +L
Sbjct: 176 YIIDLHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKG-VEILD 226
>gi|171741226|ref|ZP_02917033.1| hypothetical protein BIFDEN_00300 [Bifidobacterium dentium ATCC
27678]
gi|171276840|gb|EDT44501.1| hypothetical protein BIFDEN_00300 [Bifidobacterium dentium ATCC
27678]
Length = 264
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + GM G+GTGST + + L ++ G + +SR
Sbjct: 33 MDKAQQDALKKAAGIEAAKLIQSGMIAGLGTGSTVRFLVDELGRRVKEEGLEFTGVTTSR 92
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 93 RTQEQAEGYGIKIVDIDDVDHIDVTIDGADEVDKDFNGIKGGGAALLWEKIVATNSNKIV 152
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL G +D
Sbjct: 153 WIVDESKVVDTIGKFPLPVEVIPFGAGQVIKKFE----SRGYKPVLRLDAEG-QPVRTDE 207
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NY+VD I P+ ++ +L GV+EHGLF++MVD I+G +G
Sbjct: 208 NNYVVDLHLERIDHPEDLAEDLITTVGVVEHGLFLHMVDQVIVGDPNG 255
>gi|170024994|ref|YP_001721499.1| ribose 5-phosphate isomerase [Yersinia pseudotuberculosis YPIII]
gi|169751528|gb|ACA69046.1| ribose 5-phosphate isomerase [Yersinia pseudotuberculosis YPIII]
Length = 236
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 3/229 (1%)
Query: 3 ALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
KR AARR I +V DGMTLG+G+G+T+ F+ L +A G ++ +SR T
Sbjct: 5 QNDAKRAAARRVIQDFVFDGMTLGLGSGTTSHFFVRELGQHVAKGLQLTCTTTSRATSEV 64
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I L P +++ +DL+IDG DEID R +IKG G LL EKIIAHA+ R I I DE
Sbjct: 65 ARDVGIELSDPNEMNEIDLTIDGPDEIDRRFNMIKGGGACLLWEKIIAHASKRMICICDE 124
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYI 180
+K V+ LG+ LP+EI F +T ++ V + GL+ +RR G G ++D GN+I
Sbjct: 125 TKIVNCLGQFPLPVEIVPFAWKQTERRVERVLAEQGLHHVPIIRRMGGGHPVITDSGNFI 184
Query: 181 VDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D G I P+ + EL IPGV+E+GLF ++G DG V
Sbjct: 185 LDCHCGAIITAPEPLEIELNRIPGVVENGLFTCEATGMVVGYFDGSSYV 233
>gi|229823170|ref|ZP_04449239.1| hypothetical protein GCWU000282_00467 [Catonella morbi ATCC 51271]
gi|229787336|gb|EEP23450.1| hypothetical protein GCWU000282_00467 [Catonella morbi ATCC 51271]
Length = 237
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 88/227 (38%), Positives = 123/227 (54%), Gaps = 7/227 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKI 64
K R A YV DGM +G+GTGSTA F+ + +IA+G ++ + +SR T
Sbjct: 5 KELVGRYAANYVKDGMVVGLGTGSTAYWFVEEVGARIADGRLKQIVGVATSRRTAEQALK 64
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
I + + V+ +DL +DG DE+ IKG GGALL EKI+A A R I + E K
Sbjct: 65 LGITIMDLDRVNHIDLVVDGADEVTRDFYGIKGGGGALLHEKIVAKNAKRSIWVVGEDKL 124
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
VD LG LP+E+ QFG GL R + L+++D GNYI+D
Sbjct: 125 VDTLGAFPLPVEVVQFGSWNLFRQ----LMAAGLEPSFR-KVGSDSLYMTDSGNYIIDLK 179
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G IP P ++ EL N GV+EHGLF+++ D ++G +DG L+ QK
Sbjct: 180 LGQIPYPHQLAHELKNTVGVVEHGLFLDVCDTFLVGRADGTILLYQK 226
>gi|77461603|ref|YP_351110.1| ribose-5-phosphate isomerase A [Pseudomonas fluorescens Pf0-1]
gi|123602898|sp|Q3K535|RPIA_PSEPF RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|77385606|gb|ABA77119.1| ribose 5-phosphate isomerase A [Pseudomonas fluorescens Pf0-1]
Length = 224
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAQH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS+++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSNLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAQTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GTS+G +
Sbjct: 169 GNIILDVHNLQITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTSEGVKTL 221
>gi|209695960|ref|YP_002263890.1| ribose-5-phosphate isomerase A [Aliivibrio salmonicida LFI1238]
gi|238057746|sp|B6EKP6|RPIA_ALISL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|208009913|emb|CAQ80226.1| ribose-5-phosphate isomerase A (phosphoriboisomerase A) [Aliivibrio
salmonicida LFI1238]
Length = 218
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ LA + + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVEVGSIVGVGTGSTVNHFIDALA-TMKDDIKGAVSSSVASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV+ +D+ +DG DEI+ +IKG G AL REKI+A + +FI I D
Sbjct: 60 L-KELGIEVFDCNDVAGLDVYVDGADEINGLNEMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKQVDILGEFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VVTDNGNMI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I + + + ++ +PGV+ GLF + D ++G DG
Sbjct: 169 LDVHNMKITNAKELEDKINALPGVVTVGLFAHRGADVLLVGAPDGVKK 216
>gi|16803015|ref|NP_464500.1| ribose-5-phosphate isomerase A [Listeria monocytogenes EGD-e]
gi|47096264|ref|ZP_00233862.1| ribose 5-phosphate isomerase A [Listeria monocytogenes str. 1/2a
F6854]
gi|224500653|ref|ZP_03669002.1| ribose-5-phosphate isomerase A [Listeria monocytogenes Finland
1988]
gi|224502709|ref|ZP_03671016.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL R2-561]
gi|254827921|ref|ZP_05232608.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL N3-165]
gi|254898851|ref|ZP_05258775.1| ribose-5-phosphate isomerase A [Listeria monocytogenes J0161]
gi|254911660|ref|ZP_05261672.1| ribose-5-phosphate isomerase A [Listeria monocytogenes J2818]
gi|254935986|ref|ZP_05267683.1| ribose-5-phosphate isomerase A [Listeria monocytogenes F6900]
gi|255027875|ref|ZP_05299861.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL J2-003]
gi|255028755|ref|ZP_05300706.1| ribose-5-phosphate isomerase A [Listeria monocytogenes LO28]
gi|32171691|sp|Q8Y8D3|RPIA_LISMO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|16410377|emb|CAC99053.1| lmo0975 [Listeria monocytogenes EGD-e]
gi|47015409|gb|EAL06344.1| ribose 5-phosphate isomerase A [Listeria monocytogenes str. 1/2a
F6854]
gi|258600302|gb|EEW13627.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL N3-165]
gi|258608574|gb|EEW21182.1| ribose-5-phosphate isomerase A [Listeria monocytogenes F6900]
gi|293589609|gb|EFF97943.1| ribose-5-phosphate isomerase A [Listeria monocytogenes J2818]
Length = 224
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 130/227 (57%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ FG + L++ L +++ ++V++ GNYI+D
Sbjct: 123 VRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLR-----KQSSGEVYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D ++ +L IPG++EHGLF++ VD I ++GE +++K
Sbjct: 178 NQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK 224
>gi|332239292|ref|XP_003268840.1| PREDICTED: ribose-5-phosphate isomerase [Nomascus leucogenys]
Length = 311
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + + +++ + IP+S
Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVHRITERVKQENLNLVCIPTSFQ 134
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 135 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 194
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 195 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQ---KFGGVVELRMAVNKAGPVVT 251
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 252 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 308
>gi|58336914|ref|YP_193499.1| ribose-5-phosphate isomerase A [Lactobacillus acidophilus NCFM]
gi|67461234|sp|Q5FLF6|RPIA_LACAC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|58254231|gb|AAV42468.1| ribose-5-phosphate isomerase [Lactobacillus acidophilus NCFM]
Length = 230
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSS 55
MD ++K+ AA +A V GM LG+GTGST F+ L + + ++ +S
Sbjct: 1 MDKKEQDRLKKEAAEKAANMVQSGMILGVGTGSTVAFFIDALGKRKDEEDLKLKAIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + D+ DL++DG D + L IKG GGAL EK +A + +
Sbjct: 61 NRSKKQLESLGFEVSELADIDQADLTVDGSDRVADNLDGIKGGGGALTLEKNVAINSKKI 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
+ I DESK V L LP+E+ + ++ GL + R +G +++
Sbjct: 121 VWIVDESKLVHRLSGFPLPVEVLPISCEQNFRRFEQE----GLKPQ--WRTDGDKRYITH 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GNYI+D IP P ++ L + GV+EHGLF++M D II SDG
Sbjct: 175 YGNYIIDLAVDPIPAPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIE 226
>gi|315037823|ref|YP_004031391.1| ribose-5-phosphate isomerase A [Lactobacillus amylovorus GRL 1112]
gi|325956298|ref|YP_004286908.1| ribose-5-phosphate isomerase A [Lactobacillus acidophilus 30SC]
gi|312275956|gb|ADQ58596.1| ribose-5-phosphate isomerase A [Lactobacillus amylovorus GRL 1112]
gi|325332863|gb|ADZ06771.1| ribose-5-phosphate isomerase A [Lactobacillus acidophilus 30SC]
gi|327183117|gb|AEA31564.1| ribose-5-phosphate isomerase A [Lactobacillus amylovorus GRL 1118]
Length = 230
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 11/232 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSS 55
MD ++K+ A +A V GM LG+GTGST F+ L + +G +++ ++ +S
Sbjct: 1 MDKTEQDRLKKEVAEKAADMVKSGMILGVGTGSTVAFFIDALGKRKDEDGLKLKAIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + D+ DL++DG D + L IKG GGAL EK +A + +
Sbjct: 61 NRSKKQLEGLGFKVSELADIDQADLTVDGSDRVADNLDGIKGGGGALTLEKNVAINSKKI 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
+ I DESK V L LP+E+ + ++ GL + R+ +G +++
Sbjct: 121 VWIVDESKLVHRLSGFPLPVEVLPISCEQNFRRFEQE----GLKPQWRM--DGDKRYITH 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GNYI+D IP P ++ L + GV+EHGLF++M D II SDG
Sbjct: 175 YGNYIIDLAVDPIPAPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIE 226
>gi|284161986|ref|YP_003400609.1| ribose 5-phosphate isomerase [Archaeoglobus profundus DSM 5631]
gi|284011983|gb|ADB57936.1| ribose 5-phosphate isomerase [Archaeoglobus profundus DSM 5631]
Length = 222
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 125/229 (54%), Gaps = 8/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ K A A++ V DGM LG+G+G+T F+ L ++I G V +PSS +
Sbjct: 1 MNEKEIVAEEAVKLVEDGMVLGIGSGTTIAVFLEKLGERIKKEGLEVYGVPSSYQSHFLA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
I + + S +DL IDG D+ID L IKG GGAL REKI++ A+ RFIVI +E
Sbjct: 61 LKAGIRIVDLFEYSELDLCIDGADQIDKNLNCIKGGGGALTREKIVSQASKRFIVIAEER 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD L +PIE+ F + L+E G +LR G +SD GN+I+D
Sbjct: 121 KFVDKL-SMPVPIEVIPFAYGHVVRKLQE----MGGICKLREGSGKLGPVISDNGNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
F I +P+ + L I G++E+G+F N VD I+G+ DG +L++
Sbjct: 176 CNFDEIENPKELELSLNAIAGIVENGIFCN-VDEVILGSKDG-IKILKR 222
>gi|149908679|ref|ZP_01897340.1| ribose-5-phosphate isomerase A [Moritella sp. PE36]
gi|149808221|gb|EDM68160.1| ribose-5-phosphate isomerase A [Moritella sp. PE36]
Length = 218
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A A++YV +G+GTGST F+ L I + V S +T+
Sbjct: 1 MTQDELKKAAGWAALEYVKKDSIVGVGTGSTVNHFIDALG-TIREDIKGAVSSSIESTKR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + V +D+ +DG DEIDS +IKG G AL REKI+A A +F+ I D
Sbjct: 60 L-EAMGIEVFDLNSVPHLDIYVDGADEIDSNNNMIKGGGAALTREKIVAAVADQFVCIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K V LG LP+E+ + G + R V+D GN I
Sbjct: 119 DTKNVAVLGDFPLPVEVIPMARSYVGRE----LVQLGGDPVYREG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I DP+ + + + GV+ +GLF D + GT +G
Sbjct: 169 LDVYNMQITDPKALEIAINGLVGVVTNGLFAARGADIVLTGTQNGVKTT 217
>gi|307705176|ref|ZP_07642048.1| ribose 5-phosphate isomerase A [Streptococcus mitis SK597]
gi|307621261|gb|EFO00326.1| ribose 5-phosphate isomerase A [Streptococcus mitis SK597]
Length = 227
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDLVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVDKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP EL ++ GV+EHGLF MVD I+ DG ++ +
Sbjct: 176 LALDVIEDPITFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTSR 224
>gi|306823523|ref|ZP_07456898.1| ribose 5-phosphate isomerase A [Bifidobacterium dentium ATCC 27679]
gi|304553230|gb|EFM41142.1| ribose 5-phosphate isomerase A [Bifidobacterium dentium ATCC 27679]
Length = 258
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + GM G+GTGST + + L ++ G + +SR
Sbjct: 27 MDKAQQDALKKAAGIEAAKLIQSGMIAGLGTGSTVRFLVDELGRRVKEEGLEFTGVTTSR 86
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 87 RTQEQAEGYGIKIVDIDDVDHIDVTIDGADEVDKDFNGIKGGGAALLWEKIVATNSNKIV 146
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL G +D
Sbjct: 147 WIVDESKVVDTIGKFPLPVEVIPFGAGQVIKKFE----SRGYKPVLRLDAEG-QPVRTDE 201
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NY+VD I P+ ++ +L GV+EHGLF++MVD I+G +G
Sbjct: 202 NNYVVDLHLERIDHPEDLAEDLITTVGVVEHGLFLHMVDQVIVGDPNG 249
>gi|262282850|ref|ZP_06060617.1| ribose-5-phosphate isomerase A [Streptococcus sp. 2_1_36FAA]
gi|262261102|gb|EEY79801.1| ribose-5-phosphate isomerase A [Streptococcus sp. 2_1_36FAA]
Length = 225
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVTDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQIIAVTTSSVTSQQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+D IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDEVDLVDVTVDGADEVDPNFNGIKGGGGALLMEKVVATPTKCYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPAFRQKDGQRFVTDMKNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P + EL +I GV+EHGLF MVD I+ G VL+
Sbjct: 176 LDLGVIENPIEFARELDHIVGVVEHGLFNQMVDKVIVAGKAG-VQVLE 222
>gi|256761994|ref|ZP_05502574.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T3]
gi|256683245|gb|EEU22940.1| ribose-5-phosphate isomerase A [Enterococcus faecalis T3]
Length = 224
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 88/224 (39%), Positives = 128/224 (57%), Gaps = 6/224 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
MK+ A +YV DGM +G+GTGSTAK + + ++ G + + +S+ TE
Sbjct: 1 MKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQALA 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S ++V V+L+IDG DEI + + IKG G ALL EKI+A + + I I D+SK
Sbjct: 61 LGIPLKSIDEVPYVNLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKSKM 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
VD LG LP+E+ +G + + KE G + LRL G ++DGG++I+D
Sbjct: 121 VDDLGAFPLPVEVVPYGSCQLVHLFKEK----GYHPALRLNAAGET-LITDGGHHIIDLH 175
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP+ + L N+ GV+EHGLF+NMV I+G DG +
Sbjct: 176 LEKITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTL 219
>gi|167036190|ref|YP_001671421.1| ribose-5-phosphate isomerase A [Pseudomonas putida GB-1]
gi|189043822|sp|B0KP28|RPIA_PSEPG RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166862678|gb|ABZ01086.1| ribose 5-phosphate isomerase [Pseudomonas putida GB-1]
Length = 224
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ +++ +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDEKSVVGVGTGSTANFFIDALAQH--KTAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D+ L LIKG G AL REKI+A A FI
Sbjct: 59 ATAQRLKGHGIPVYELNSVSELEFYVDGADESDAHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R V+D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
GN I+D I +P + ++ I GV+ +GLF D ++GTS+G
Sbjct: 169 GNVILDVHNLQITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTSEGVK 219
>gi|26991826|ref|NP_747251.1| ribose-5-phosphate isomerase A [Pseudomonas putida KT2440]
gi|148550257|ref|YP_001270359.1| ribose-5-phosphate isomerase A [Pseudomonas putida F1]
gi|38258489|sp|Q88CN0|RPIA_PSEPK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166229230|sp|A5WAL5|RPIA_PSEP1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|24986941|gb|AAN70715.1|AE016715_4 ribose 5-phosphate isomerase [Pseudomonas putida KT2440]
gi|148514315|gb|ABQ81175.1| ribose-5-phosphate isomerase [Pseudomonas putida F1]
gi|313501125|gb|ADR62491.1| RpiA [Pseudomonas putida BIRD-1]
Length = 224
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ +++ +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDEKSVVGVGTGSTANFFIDALAQH--KTAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D+ L LIKG G AL REKI+A A FI
Sbjct: 59 ATAQRLKGHGIPVYELNSVSELEFYVDGADESDAHLHLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R V+D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
GN I+D + I +P + ++ I GV+ +GLF D ++GT++G
Sbjct: 169 GNVILDVYNLQITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTAEGVK 219
>gi|306825409|ref|ZP_07458749.1| ribose 5-phosphate isomerase A [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432347|gb|EFM35323.1| ribose 5-phosphate isomerase A [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 227
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFRDKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I +P EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|87123015|ref|ZP_01078872.1| ribose 5-phosphate isomerase [Marinomonas sp. MED121]
gi|86161705|gb|EAQ63013.1| ribose 5-phosphate isomerase [Marinomonas sp. MED121]
Length = 223
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A++Y+ D +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDELKLAVAKAAVEYILPLLEDDTIVGVGTGSTANLFIDELAQH--KLKFEATVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H IP++ V+ + + +DG DE ++ L LIKG G AL REKI+A + +F+
Sbjct: 59 ASAERLKSHGIPVYDLNSVADIAVYVDGADESNNHLHLIKGGGAALTREKIVAAVSKQFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D+SK V+ LG LP+E+ + G + R V+D
Sbjct: 119 CIADQSKLVNVLGDFPLPVEVIPMSRSYVARE----LVKLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D + I D + ++ ++ GV+ +GLF + D ++GT +G +
Sbjct: 169 GNQILDVYNLKIEDAVALENKINSLVGVVTNGLFASRPADVLLLGTEEGVKTL 221
>gi|224824453|ref|ZP_03697560.1| ribose 5-phosphate isomerase [Lutiella nitroferrum 2002]
gi|224602946|gb|EEG09122.1| ribose 5-phosphate isomerase [Lutiella nitroferrum 2002]
Length = 219
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
Q+K A++A+++V D +G+GTGST F+ LA G + SS +
Sbjct: 3 TQNQLKLAVAQKALEFVPDNCIVGVGTGSTVNLFIEELAT--IKGRIKGAVSSSEASTER 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K HHIP++ V V + IDG DE++ L +IKG GGAL REKI+ A+ FI I DE
Sbjct: 61 LKAHHIPVYDLNTVDEVPVYIDGADEVNHYLHMIKGGGGALTREKIVGAVANEFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
+K VD LG LP+E+ + G + ELR FV+D GN I+
Sbjct: 121 TKYVDVLGGFPLPVEVVPMARSYVARE----LVKLGGHPELR------EHFVTDNGNIIL 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
D + I P + + I GV+ GLF D I+G G VL
Sbjct: 171 DVYRLHISKPVELEETINQIAGVVTCGLFARRRADVLILGRQSG-IEVL 218
>gi|289167720|ref|YP_003445989.1| ribose-5-phosphate epimerase [Streptococcus mitis B6]
gi|288907287|emb|CBJ22122.1| ribose-5-phosphate epimerase [Streptococcus mitis B6]
Length = 227
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDHVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRCFERAGY------KPSFREKSGQRFVTDMKNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL +I GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHIVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|71278882|ref|YP_268287.1| ribose-5-phosphate isomerase A [Colwellia psychrerythraea 34H]
gi|123633173|sp|Q485H8|RPIA_COLP3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|71144622|gb|AAZ25095.1| ribose 5-phosphate isomerase [Colwellia psychrerythraea 34H]
Length = 218
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK AA +A++++ + +G+GTGST F+ LA + + V S +T+
Sbjct: 1 MTQDEMKNAAAIKALEFIENDTIVGVGTGSTVNFFIEALA-SMKDKIAGAVSSSEESTKR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I + V +D+ +DG DEI + +IKG G AL REKI+A A +FI I D
Sbjct: 60 L-KAHGIEVFDLNSVDVLDVYVDGADEITRHMSMIKGGGAALTREKIVAAVAKKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK+V LG LP+E+ + G + R +D GN I
Sbjct: 119 DSKQVKVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYRQG------VTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
+D + I DP+ + ++ I GV+ +GLF + D ++G+ DG ++
Sbjct: 169 LDVYNLEILDPKALETQINAIVGVVTNGLFALRGADILVLGSKDGIQVI 217
>gi|307706384|ref|ZP_07643196.1| ribose 5-phosphate isomerase A [Streptococcus mitis SK321]
gi|307618302|gb|EFN97457.1| ribose 5-phosphate isomerase A [Streptococcus mitis SK321]
Length = 227
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVNDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+D++ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDNQFNGIKGGGGALLMEKVVATPSKDYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVDKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL +I GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHIVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|55821133|ref|YP_139575.1| ribose-5-phosphate isomerase A [Streptococcus thermophilus LMG
18311]
gi|116627851|ref|YP_820470.1| ribose-5-phosphate isomerase A [Streptococcus thermophilus LMD-9]
gi|67461288|sp|Q5M481|RPIA_STRT2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|122267552|sp|Q03KJ8|RPIA_STRTD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|55737118|gb|AAV60760.1| ribose 5-phosphate isomerase [Streptococcus thermophilus LMG 18311]
gi|116101128|gb|ABJ66274.1| ribose-5-phosphate isomerase [Streptococcus thermophilus LMD-9]
Length = 226
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 127/229 (55%), Gaps = 6/229 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +V DGM +G+GTGSTA F+ + +I G V + +S T
Sbjct: 2 DELKKLAGVYAAGFVEDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSTQTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+D+++DG DE+D +L IKG GGALL EKI+A ++I + DES
Sbjct: 62 EGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ G R+ G FV+D N+I+D
Sbjct: 122 KMVDQLGAFKLPVEVVQYGADRLY----LDFESKGYKPSFRVTEQGD-RFVTDMKNFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV+EHGLF MV+ I+ DG +V K
Sbjct: 177 LDLGKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKIVEVK 225
>gi|209515694|ref|ZP_03264558.1| ribose 5-phosphate isomerase [Burkholderia sp. H160]
gi|209503930|gb|EEA03922.1| ribose 5-phosphate isomerase [Burkholderia sp. H160]
Length = 270
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV G +G+GTGSTA F+ LA + SS
Sbjct: 40 MTQDELKQLVGQAAADYVNANVPQGSVIGVGTGSTANCFIDALAAT--KSRYRGAVSSSL 97
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I + ++ S+ + +DG DEID +IKG GGAL REKI+A + F+
Sbjct: 98 ATTARLQSHGIKVLDLNEIDSLPVYVDGADEIDRSGAMIKGGGGALTREKIVASVSDVFV 157
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ LG LPIE+ + G +R+ + G F++D
Sbjct: 158 CIADASKVVETLGNFPLPIEVVPMARTAIGRR----VTALGGVPVVRVTKEGV-PFITDN 212
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I DP+ + ++ PGV+ GLF + ++GT G +
Sbjct: 213 GNEIIDVKGLKISDPRTLEAQINAWPGVVTVGLFAGRGANLCLLGTDTGVQTI 265
>gi|33865143|ref|NP_896702.1| ribose-5-phosphate isomerase A [Synechococcus sp. WH 8102]
gi|41017650|sp|Q7U8K8|RPIA_SYNPX RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33638827|emb|CAE07124.1| putative ribose 5-phosphate isomerase A [Synechococcus sp. WH 8102]
Length = 239
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 83/236 (35%), Positives = 132/236 (55%), Gaps = 11/236 (4%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A++ + DGM LG+G+GSTA + L K+A+G + + +S E
Sbjct: 5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIKALGAKLASGELKDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELNIPLLSLNAVDRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K V+ L +LP+E+ +++ + G ELR+ + +G V+D GN
Sbjct: 125 STKLVERLNLGFLLPVEVLPGAW----RQVQQQLAALGGKAELRMAQRKAGPVVTDQGNL 180
Query: 180 IVDA-FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGE--CLVLQK 231
++D G I DP + + NIPGV+E+GLF+++VD ++G +DG L+K
Sbjct: 181 VLDVTMNGGISDPAALESTVNNIPGVLENGLFVDLVDEVLVGEITDGSAGVRSLEK 236
>gi|59712712|ref|YP_205488.1| ribose-5-phosphate isomerase A [Vibrio fischeri ES114]
gi|197334434|ref|YP_002156904.1| ribose 5-phosphate isomerase A [Vibrio fischeri MJ11]
gi|67461218|sp|Q5E2Z6|RPIA_VIBF1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238690262|sp|B5FAI8|RPIA_VIBFM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|59480813|gb|AAW86600.1| ribose 5-phosphate isomerase, constitutive [Vibrio fischeri ES114]
gi|197315924|gb|ACH65371.1| ribose 5-phosphate isomerase A [Vibrio fischeri MJ11]
Length = 218
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ LA + N + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVEAGSIVGVGTGSTVNHFIDALA-TMKNEIKGAVSSSVASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV+ +D+ +DG DEI+ + +IKG G AL REKI+A + +FI I D
Sbjct: 60 L-KELGIEVFDCNDVAGLDVYVDGADEINGKNEMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K+VD LG+ LP+E+ + G + R ++D GN I
Sbjct: 119 DTKQVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + ++ +PGV+ GLF + D ++G +G
Sbjct: 169 LDVHGMKITDAKDLEDKINALPGVVTVGLFAHRGADVLLVGAPEGVKK 216
>gi|77024233|gb|ABA55587.1| chloroplast ribulose phosphate isomerase [Pavlova lutheri]
Length = 277
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
++K+ A +A+ YV GM +G+GTGSTA + + K+ +G + IP+S T
Sbjct: 37 TQDELKKLAGYKAVDDYVRSGMVVGLGTGSTAAFAVERVGMKLKSGELKDIIAIPTSVRT 96
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + S +D++IDG D +D RL LIKG GGALLREK++ A +FIVI
Sbjct: 97 KEQAEALGIPLVTLGTHSDLDVAIDGADAVDPRLNLIKGGGGALLREKMVEVCAKKFIVI 156
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR-------NGSG 170
D++K LP+EI F TL + + G +LRL +G+
Sbjct: 157 VDDTKLCAGLGPSFPLPVEITPFCWEHTLRKVAACPAAAGCEAKLRLGSAATGSKVDGTD 216
Query: 171 LFVSDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
V+D NYIVD FF I DP ++ +L GV++HGLF M II DG
Sbjct: 217 PAVTDNDNYIVDLFFKQPIADPVALAAQLKATVGVVDHGLFCGMTTACIIAGKDG 271
>gi|229524465|ref|ZP_04413870.1| ribose 5-phosphate isomerase A [Vibrio cholerae bv. albensis VL426]
gi|229338046|gb|EEO03063.1| ribose 5-phosphate isomerase A [Vibrio cholerae bv. albensis VL426]
Length = 218
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +T
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDEIKGAVSSSIASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DVS +D+ +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNDVSELDIYVDGADEINPERDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYIARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I P+ + ++ I GV+ GLF + D I GT G +
Sbjct: 169 LDVYNMKITHPKDLESKINGIAGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|20090535|ref|NP_616610.1| ribose-5-phosphate isomerase A [Methanosarcina acetivorans C2A]
gi|30173336|sp|Q8TQ69|RPIA_METAC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|19915563|gb|AAM05090.1| ribose 5-phosphate epimerase [Methanosarcina acetivorans C2A]
Length = 234
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 7/226 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIH 65
KR A A V GM +G+GTGST + L ++ G + + +S +E
Sbjct: 13 KRAAGIAAAGLVSSGMLVGLGTGSTVAYTIKELGRRVREEGLDILGVVTSYQSEMLAIEA 72
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
I L + +DL+IDG D+IDS LR IKG G A REKI++ +A RF+V+ DESK
Sbjct: 73 GIRLTTLAQHPELDLAIDGADQIDSELRAIKGGGAAHTREKIVSVSARRFVVVADESKTS 132
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
L + ++P+E+ F + ++E G +LR G ++D GN+++D F
Sbjct: 133 KQLDK-LVPVEVLPFAKEPVVKKIRE----LGGKPQLRSAVKKDGPVITDNGNFVLDVEF 187
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I DP+ ++ +L +IPGV+EHG+F N V IG DG ++ +
Sbjct: 188 GVIKDPEALALQLSSIPGVVEHGIFCN-VSELYIGNKDGAIKIITR 232
>gi|229593194|ref|YP_002875313.1| ribose-5-phosphate isomerase A [Pseudomonas fluorescens SBW25]
gi|259494153|sp|C3K3R7|RPIA_PSEFS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|229365060|emb|CAY53246.1| ribose-5-phosphate isomerase A [Pseudomonas fluorescens SBW25]
Length = 223
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ + D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDLILPKLDDKSIVGVGTGSTANCFIDALAQH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPVLGAFPLPVEVIPMARSHVARE----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D F I +P + ++ I GV+ +GLF D ++GTS+G +
Sbjct: 169 GNIIIDVFNLQITNPVELETQINAIVGVVTNGLFAARPADVLLLGTSEGVKTL 221
>gi|72382858|ref|YP_292213.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str.
NATL2A]
gi|123759860|sp|Q46J18|RPIA_PROMT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|72002708|gb|AAZ58510.1| ribose-5-phosphate isomerase [Prochlorococcus marinus str. NATL2A]
Length = 236
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 126/226 (55%), Gaps = 9/226 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRN 57
MD QMK+ A+ A+ + +GM LG+G+GSTA + LA KI +G V + +S
Sbjct: 1 MDLQNQMKKAVAQAAVDQIQNGMILGLGSGSTAALMIEALAIKIKSGEIKDVVGVTTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
E IPL S VS +DL+IDG DE++ + +LIKG G ++EK++A A +FIV
Sbjct: 61 GEVLASELGIPLKSLSSVSEIDLAIDGADEVNPKFQLIKGGGACHVQEKLVAALAKKFIV 120
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D +K V+ LP+E+ + ++ G LR+ + +G V+D
Sbjct: 121 VVDSTKLVEKLNLDFKLPVEVLPSAWKQV----QKTLINLGGEGNLRMAQKKAGPIVTDQ 176
Query: 177 GNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
GN I+D F I P+++ ++ NIPGV+E+GLF+N+ D ++G
Sbjct: 177 GNLILDLTFRNGIDKPELLESQINNIPGVLENGLFVNLTDEVLVGK 222
>gi|330961911|gb|EGH62171.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 223
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGIGTGSTANCFIDALARH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ IDG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYIDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVVPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + + +I GV+ +GLF D ++GT +G +
Sbjct: 169 GNIIIDVHNMSITNPVELEANINDIVGVVTNGLFAARPADLLLLGTENGVKTL 221
>gi|52425799|ref|YP_088936.1| ribose-5-phosphate isomerase A [Mannheimia succiniciproducens
MBEL55E]
gi|67461372|sp|Q65RQ9|RPIA_MANSM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|52307851|gb|AAU38351.1| RpiA protein [Mannheimia succiniciproducens MBEL55E]
Length = 219
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+Q+V M +G+G+GST F+ L + +S+ +E
Sbjct: 1 MNQLEMKKVAAKAALQFVKPDMIVGVGSGSTVNCFIEELGAF--RDQIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVSS+D+ +DG DEI+ + +IKG G AL REKI++ A FI I D
Sbjct: 59 LLRKQGIEVFSANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVSSLAKNFICIVD 118
Query: 121 ESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G + E R ++D GN
Sbjct: 119 SSKQVDILGSTFPLPVEVIPMARSQVARK----LVALGGSPEWREG------VITDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F +N I+GT DG ++
Sbjct: 169 ILDVHNFIIMNPIEMEKELNNVAGVVTNGIFALNAAHTVIVGTPDGAKII 218
>gi|261868182|ref|YP_003256104.1| ribose-5-phosphate isomerase A [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413514|gb|ACX82885.1| ribose 5-phosphate isomerase A [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 218
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AA+ A+Q+V M +G+G+GST F+ L + +S+ +E
Sbjct: 1 MDQLEMKKIAAQAALQFVKPEMIVGVGSGSTVNCFIEALGAL--KNQIKGAVAASKKSEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVS +D+ +DG DEI+ + +IKG G AL REKI+A A FI I D
Sbjct: 59 LLRQQGIEVFSTNDVSGLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKNFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LPIE+ ++ G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPIEVIPMARSQVARK----LVALGGAPEYREG------VVTDNGNI 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL +I GV+ +G+F + D I+GT G ++
Sbjct: 169 ILDVHNFEIMNPVAMEKELNDIAGVVTNGIFALRSADTVIVGTPSGAKII 218
>gi|109899809|ref|YP_663064.1| ribose-5-phosphate isomerase A [Pseudoalteromonas atlantica T6c]
gi|123170724|sp|Q15Q28|RPIA_PSEA6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|109702090|gb|ABG42010.1| ribose-5-phosphate isomerase [Pseudoalteromonas atlantica T6c]
Length = 218
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A+ A++YV +G+GTGST F+ LA I N V S +TE
Sbjct: 1 MNQDDKKKAVAQAAVRYVEQDSIIGVGTGSTVNYFIEALAP-IKNDIVGAVSSSEASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + V + + +DG DEI +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LTAL-GIEVFDLNSVDQLSVYVDGADEITEHRHMIKGGGAALTREKIVAAVAQKFVCIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K V LG LP+E+ + + + G + R V+D GN I
Sbjct: 119 DTKNVGVLGAFPLPVEVIPMARSYVAREIVK----LGGDPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
+D I +P + +L NI GV+ +GLF D + G+ G
Sbjct: 169 LDVHNLKILNPVELERQLNNIVGVVTNGLFAARGADVVLTGSESGV 214
>gi|323526269|ref|YP_004228422.1| ribose 5-phosphate isomerase [Burkholderia sp. CCGE1001]
gi|323383271|gb|ADX55362.1| ribose 5-phosphate isomerase [Burkholderia sp. CCGE1001]
Length = 231
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV +G +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDELKQLVGQAAADYVLANVPEGSVIGVGTGSTANCFIDALAANKAR--YRGAVSSSL 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I + ++ S+ + +DG DEID +IKG GGAL REKI+A + F+
Sbjct: 59 ATTARLQSHGIKVLDLNEIDSLPVYVDGADEIDHSGAMIKGGGGALTREKIVASVSDVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ LG LP+E+ + G +R+ + G+ F++D
Sbjct: 119 CIADASKLVETLGNFPLPVEVVPMARTAIGRR----VTALGGVPVVRVTKEGT-PFITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I DP + ++ PGV+ GLF ++GT G +
Sbjct: 174 GNEIIDVKGLRITDPCALETQINAWPGVVTVGLFAGRGASLCLLGTDTGVQTI 226
>gi|260584377|ref|ZP_05852124.1| ribose 5-phosphate isomerase A [Granulicatella elegans ATCC 700633]
gi|260157895|gb|EEW92964.1| ribose 5-phosphate isomerase A [Granulicatella elegans ATCC 700633]
Length = 226
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 6/224 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
MK ++A Y+ GMT+G+GTGSTA F+ + ++ G + + +S+ T+ +
Sbjct: 4 NMKEMVGKQAATYIESGMTVGLGTGSTAYYFVEEIGRRVKEEGLDIIGVTTSKRTKEQAE 63
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S ++V +D+++DG DEI IKG GGALL EKI+A + R I I DESK
Sbjct: 64 KLGIPLKSVDEVDFIDVTVDGADEIAPDFSGIKGGGGALLFEKIVAEQSKRIIWIVDESK 123
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
VD+LGR LP+E+ +G + + G + R+ NG +++D NYI+D
Sbjct: 124 MVDYLGRFPLPVEVIPYGSEQLFKKFE----AKGYRPKFRVLENGE-RYLTDSQNYIIDL 178
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I DP EL + GV+E GLF NM + +IGT DG +
Sbjct: 179 DVFPIKDPVTFGAELKALTGVVEQGLFTNMTETVLIGTPDGVKV 222
>gi|298492663|ref|YP_003722840.1| ribose 5-phosphate isomerase ['Nostoc azollae' 0708]
gi|298234581|gb|ADI65717.1| ribose 5-phosphate isomerase ['Nostoc azollae' 0708]
Length = 236
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 128/228 (56%), Gaps = 8/228 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A + V G +G+GTGST + L +++ +G + +P+S +E K
Sbjct: 11 MKQEVGKAAAEMVKSGSIVGLGTGSTTAYTIQYLGERLKSGELKDIVGVPTSFQSEVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + + +D++IDG DE+D+ LIKG G A REK++ + A++FIV+ D SK
Sbjct: 71 QYGVPLTTLDAIDHIDIAIDGADEVDAHKNLIKGGGAAHTREKVVDYLAAQFIVVVDSSK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ + +A+KE G ELR+ +G ++D GN ++D
Sbjct: 131 LVDRLGSSFAVPVEVIPMALTPVTNAIKE----LGGIPELRMGVKKAGPVITDQGNMVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVL 229
F I DP + L NIPGV+E+G+F+N D +IG DG+ +V
Sbjct: 187 VRFDNISDPVNLEKTLNNIPGVLENGIFVNCADVVLIGEVIDGKPVVR 234
>gi|255065957|ref|ZP_05317812.1| ribose 5-phosphate isomerase A [Neisseria sicca ATCC 29256]
gi|255049868|gb|EET45332.1| ribose 5-phosphate isomerase A [Neisseria sicca ATCC 29256]
Length = 223
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+G+GST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGSGSTVNMFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP S DV + + +DG DE++ L++IKG GGA L EK++A A+ +FI I DE
Sbjct: 61 MAQYDIPEVSLNDVMGLAVYVDGADEVNHMLQMIKGGGGAHLNEKVVASASDKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + G ELRL + + GN I+
Sbjct: 121 SKYVSRLGKFPLPVEVLPGARSLVSRK----LLAMGGQPELRLN------YTTFHGNQII 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D + I P + E+ I GV+E+G+F N D I+GT G ++
Sbjct: 171 DVYDLHIDRPLTMEDEINRITGVLENGIFARNAADVLILGTEQGVKVI 218
>gi|260435490|ref|ZP_05789460.1| ribose 5-phosphate isomerase A [Synechococcus sp. WH 8109]
gi|260413364|gb|EEX06660.1| ribose 5-phosphate isomerase A [Synechococcus sp. WH 8109]
Length = 239
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 133/236 (56%), Gaps = 11/236 (4%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A++ + DGM LG+G+GSTA + L K+A+G + + +S E
Sbjct: 5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIQGLGAKLASGELKEIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+IPL S VS +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELNIPLLSLNAVSRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ +K+ G + +LR+ + +G V+D GN
Sbjct: 125 STKLVDRLNLGFLLPVEVLPGAW----RQVKQQLEALGGSADLRMAQRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGE--CLVLQK 231
++DA G I DP + + NIPGV+E+GLF+N+ D ++G +DG L+K
Sbjct: 181 VLDAKLDGGISDPVALEQTINNIPGVLENGLFVNITDEVLVGEITDGVAGVRSLEK 236
>gi|291295733|ref|YP_003507131.1| ribose 5-phosphate isomerase [Meiothermus ruber DSM 1279]
gi|290470692|gb|ADD28111.1| ribose 5-phosphate isomerase [Meiothermus ruber DSM 1279]
Length = 228
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 129/225 (57%), Gaps = 10/225 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
D K+ AA A+++V GM +G+GTGSTA+ ++ L ++ G V +P+S T
Sbjct: 3 DQENFKQQAALEAVKFVRSGMVVGLGTGSTARYAVLELGRRLREGELSDVVAVPTSEATA 62
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + VDL+IDG DEI L LIKG GGALLREKI+ A +FIVI
Sbjct: 63 RLAQSQGIPLVEL-EARGVDLAIDGADEIAPDLSLIKGLGGALLREKIVEANARQFIVIA 121
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK+V LGRG++P+EI +FG TL A G + LR NG F SDGGN
Sbjct: 122 DHSKKVGQLGRGVVPVEIVRFGYRATLQA-------LGRMGKATLRMNGEEFFYSDGGNL 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I D FG IP P + EL IPGV+E GLFI + AI+ +G
Sbjct: 175 IADIDFGPIPKPGDLEVELKRIPGVVESGLFIGLATLAIVAGPEG 219
>gi|28899366|ref|NP_798971.1| ribose-5-phosphate isomerase A [Vibrio parahaemolyticus RIMD
2210633]
gi|260363979|ref|ZP_05776715.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus K5030]
gi|260878946|ref|ZP_05891301.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus AN-5034]
gi|260898253|ref|ZP_05906749.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus Peru-466]
gi|260899621|ref|ZP_05908016.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus AQ4037]
gi|31340397|sp|Q87LL9|RPIA_VIBPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|28807602|dbj|BAC60855.1| ribose-5-phosphate isomerase [Vibrio parahaemolyticus RIMD 2210633]
gi|308085853|gb|EFO35548.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus Peru-466]
gi|308090478|gb|EFO40173.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus AN-5034]
gi|308108222|gb|EFO45762.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus AQ4037]
gi|308111081|gb|EFO48621.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus K5030]
Length = 218
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDDIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +D+ +DG DEI+ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 L-KELGIEVFECNDVIKLDVYVDGADEINHAREMIKGGGAALTREKIVAAISEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG+ LP+E+ + G + R V+D GN I
Sbjct: 119 DTKAVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I +P+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHNMQITNPKEMEDKINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|21226175|ref|NP_632097.1| ribose-5-phosphate isomerase A [Methanosarcina mazei Go1]
gi|30173325|sp|Q8Q0R3|RPIA_METMA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|20904404|gb|AAM29769.1| Ribose 5-phosphate isomerase [Methanosarcina mazei Go1]
Length = 234
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 76/226 (33%), Positives = 120/226 (53%), Gaps = 7/226 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIH 65
KR A A V GM +G+GTGST + L ++ G + + +S +E
Sbjct: 13 KRAAGIAAAGLVSSGMVVGLGTGSTVAYTIKELGRRVKEEGLDILGVVTSYQSEMLAIDA 72
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
I L + +D++IDG D+IDS L IKG G A REKI++ +A RF+V+ D+SK
Sbjct: 73 GIRLTTLSQDPELDIAIDGADQIDSNLYTIKGGGAAHTREKIVSVSAKRFVVVADDSKTS 132
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
L + +P+E+ F ++ +++ G LR G ++D GN+++D F
Sbjct: 133 TQLDK-PVPVEVLPFAKEPAVNRIRK----LGGEPRLRSAVKKDGPVITDNGNFVLDVEF 187
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I DP+ ++ +L +PGV+EHG+F N VD IG DG ++ +
Sbjct: 188 GVIKDPEALALQLSAVPGVVEHGIFSN-VDELYIGKKDGSVKIISR 232
>gi|254468293|ref|ZP_05081699.1| ribose 5-phosphate isomerase A [beta proteobacterium KB13]
gi|207087103|gb|EDZ64386.1| ribose 5-phosphate isomerase A [beta proteobacterium KB13]
Length = 219
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A+ A+ YV G +G+GTGSTA F+ LA K+ + + SS T N
Sbjct: 4 TQDELKQQVAKAAVGYVESG-IIGVGTGSTANFFIDELA-KVKHKID-GAVASSEATANR 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K H I + V +++ +DG DEI + ++KG GGAL REKI+A A FI I DE
Sbjct: 61 LKDHGIQVFDLNSVDGMEIYVDGADEITEHMHMLKGGGGALTREKIVAANAKDFICICDE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK VD LG+ LP+E+ + + G N LR F +D GN I+
Sbjct: 121 SKYVDVLGKFPLPVEVLPMARSYVARE----LAKLGGNPVLRD-------FTTDNGNVIL 169
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
D I DP + ++ I GV+ +GLF + ++ T++G + +
Sbjct: 170 DVHNLVISDPIAMEAKINQIVGVVTNGLFAARPANTLLLATTEGVKTIKK 219
>gi|238020140|ref|ZP_04600566.1| hypothetical protein GCWU000324_00010 [Kingella oralis ATCC 51147]
gi|237868534|gb|EEP69538.1| hypothetical protein GCWU000324_00010 [Kingella oralis ATCC 51147]
Length = 227
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
Q+K+ AA +A+++V + +G+GTGST F+ L + +S +
Sbjct: 8 TQDQLKQLAAAKAVEFVPENEYIGIGTGSTVNFFIQALGQSGKK--IKGAVTTSLKSAEL 65
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + IP +V+ + + IDG DEI+ +++IKG G ALL EKI+A + +FI I DE
Sbjct: 66 MEQYGIPQIQLNEVTRLGVYIDGADEINHMMQMIKGGGAALLPEKIVATLSDQFICIADE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + + G ELR+ + GN I+
Sbjct: 126 SKYVRKLGKFPLPVEVIPMARSMVARKIVK----LGGQPELRIGCK------TLHGNEIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
D + +P + L I GV+E+GLF + D I+ DG ++
Sbjct: 176 DVHGLDLSEPMKMEDTLNRITGVVENGLFAHRYADLLILAKKDGAEVI 223
>gi|253997877|ref|YP_003049940.1| ribose-5-phosphate isomerase A [Methylovorus sp. SIP3-4]
gi|313199942|ref|YP_004038600.1| ribose 5-phosphate isomerase [Methylovorus sp. MP688]
gi|253984556|gb|ACT49413.1| ribose 5-phosphate isomerase [Methylovorus sp. SIP3-4]
gi|312439258|gb|ADQ83364.1| ribose 5-phosphate isomerase [Methylovorus sp. MP688]
Length = 218
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 111/227 (48%), Gaps = 15/227 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A+ A++YV G +G+GTGSTA F+ LA K+ + + SS T
Sbjct: 3 TQDELKQQVAKAAVEYVKGG-IIGVGTGSTANFFIDELA-KVKSKID-GAVASSEATAQR 59
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ H I + V +++ +DG DEI + ++KG GGAL REKI+A A FI I D
Sbjct: 60 LRAHGIEVFDLNSVDGMEIYVDGADEITEHMHMLKGGGGALTREKIVAACAKTFICICDA 119
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G +LR F +D GN I+
Sbjct: 120 SKYVPVLGKFPLPVEVLPMARSHVARE----LTKLGGQPKLRD-------FTTDNGNIIL 168
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
D I +P + ++ I GV+ +GLF D ++ T +G
Sbjct: 169 DVHGLEILNPVEMEAKINQIVGVVTNGLFAARPADVLLLATPEGVKT 215
>gi|168049606|ref|XP_001777253.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671355|gb|EDQ57908.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 320
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 132/235 (56%), Gaps = 8/235 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
++K+ AA +A++YV GM LG+GTGSTA + + + + G + +P+S+ T
Sbjct: 87 TQDELKKIAAEKAVEYVKSGMVLGLGTGSTAAFAVAKIGELLKEGKLTDIVGVPTSKRTA 146
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+++F+VI
Sbjct: 147 EQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEKASAKFVVIV 206
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K V LG +P+E+ QF LK + G E+ LR +G +V+D
Sbjct: 207 DETKLVKGLGGSGLAMPVEVVQFCWKYNAERLKNLPEVAGC--EVELRMDGDKPYVTDNS 264
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYI+D +F I D + + + GV++HGLF+NM II SDG V K
Sbjct: 265 NYIIDLYFQEPIKDANAAAHAISALEGVVDHGLFLNMASAVIIAGSDG-VTVQTK 318
>gi|254422965|ref|ZP_05036683.1| ribose 5-phosphate isomerase A [Synechococcus sp. PCC 7335]
gi|196190454|gb|EDX85418.1| ribose 5-phosphate isomerase A [Synechococcus sp. PCC 7335]
Length = 232
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRN 57
MD MK+ R A V G +G+GTGST + + ++IA+G ++ IP+S
Sbjct: 1 MDPVKLMKQEVGRAAAAQVKSGTIVGLGTGSTTAYAIQFIGERIASGELTDIKGIPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
K H IPL + ++V +D++IDG DE+D ++ LIKG G A REK++ A RF+V
Sbjct: 61 ASVLAKQHGIPLTTLDEVDHIDIAIDGADEVDPQMNLIKGGGAAHTREKVVDGLAERFVV 120
Query: 118 IGDESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D SK D +G LP+E+ V+ AL++ G E+R+ G ++D
Sbjct: 121 VVDSSKLSDKIGTIFALPVEVLPMAVSPVTRALEK----LGGKVEMRMGIQKDGPVITDQ 176
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
GN ++D FG I +P + + NIPGV+E+GLF+ + ++G DGE V
Sbjct: 177 GNMVLDVRFGGIDNPAEMEVTINNIPGVLENGLFVGLASEVLVGEVKDGEATVRS 231
>gi|221231617|ref|YP_002510769.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae ATCC
700669]
gi|225854335|ref|YP_002735847.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae JJA]
gi|254808722|sp|B8ZNH8|RPIA_STRPJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808724|sp|C1CDH6|RPIA_STRZJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|220674077|emb|CAR68592.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae ATCC
700669]
gi|225722606|gb|ACO18459.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae JJA]
Length = 227
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 124/229 (54%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQIIAVTTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P EL ++ GV+EHGLF MVD I+ DG + K
Sbjct: 176 LALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSK 224
>gi|124026595|ref|YP_001015710.1| ribose 5-phosphate isomerase [Prochlorococcus marinus str. NATL1A]
gi|226734914|sp|A2C4N6|RPIA_PROM1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123961663|gb|ABM76446.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. NATL1A]
Length = 236
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 126/226 (55%), Gaps = 9/226 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRN 57
MD QMK+ A+ A+ + +GM LG+G+GSTA + LA KI +G V + +S
Sbjct: 1 MDLQNQMKKAVAQAAVDQIQNGMILGLGSGSTAALMIEALAIKIKSGEIKDVVGVTTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
E IPL S VS +DL+IDG DE+D + +LIKG G ++EK++A A +FIV
Sbjct: 61 GEVLASELGIPLKSLSSVSEIDLAIDGADEVDPKFQLIKGGGACHVQEKLVAALAKKFIV 120
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D +K V+ LP+E+ + ++ G LR+ + +G V+D
Sbjct: 121 VVDSTKLVEKLNLDFKLPVEVLPSAWKQV----QKTLINLGGEGNLRMAQKKAGPIVTDQ 176
Query: 177 GNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
GN I+D F I P+++ ++ NIPGV+E+GLF+N+ D ++G
Sbjct: 177 GNLILDLTFRNGIDQPELLETQINNIPGVLENGLFVNLTDEVLVGK 222
>gi|261365019|ref|ZP_05977902.1| ribose 5-phosphate isomerase A [Neisseria mucosa ATCC 25996]
gi|288566606|gb|EFC88166.1| ribose 5-phosphate isomerase A [Neisseria mucosa ATCC 25996]
Length = 223
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 114/228 (50%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+G+GST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGSGSTVNMFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP S DV + + IDG DE++ L++IKG GGA L EK++A A+ +FI I DE
Sbjct: 61 MAQYDIPEVSLNDVMYLAVYIDGADEVNHMLQMIKGGGGAHLNEKVVASASDKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + G ELRL + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVLPGARSLVSRK----LLAMGGQPELRLD------CTTFHGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D + I P + E+ I GV+E+G+F N D I+GT G ++
Sbjct: 171 DVYDLNIDRPLTMEDEINRITGVVENGIFARNAADLLILGTEQGAKVI 218
>gi|156975810|ref|YP_001446717.1| ribose-5-phosphate isomerase A [Vibrio harveyi ATCC BAA-1116]
gi|269960422|ref|ZP_06174795.1| Ribose-5-phosphate isomerase A [Vibrio harveyi 1DA3]
gi|166229255|sp|A7MTQ9|RPIA_VIBHB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|156527404|gb|ABU72490.1| hypothetical protein VIBHAR_03555 [Vibrio harveyi ATCC BAA-1116]
gi|269834849|gb|EEZ88935.1| Ribose-5-phosphate isomerase A [Vibrio harveyi 1DA3]
Length = 218
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-SIKDDIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I ++ DV+ +D+ +DG DEI++ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 L-KELGIEVYECNDVAMLDIYVDGADEINAAREMIKGGGAALTREKIVAAISEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R +D GN I
Sbjct: 119 GTKAVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I +P+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHNMQITNPKELEDKINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|332204832|gb|EGJ18897.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae GA47901]
Length = 227
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A +++ DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGITAAEFIKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|212716349|ref|ZP_03324477.1| hypothetical protein BIFCAT_01266 [Bifidobacterium catenulatum DSM
16992]
gi|212660602|gb|EEB21177.1| hypothetical protein BIFCAT_01266 [Bifidobacterium catenulatum DSM
16992]
Length = 244
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + +GM G+GTGST + + L ++ G + +SR
Sbjct: 13 MDKAQQDALKKAAGIEAAKLIQNGMIAGLGTGSTVRFLVDELGRRVQEEGLEFTGVTTSR 72
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 73 RTQEQAEGYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV 132
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL G +D
Sbjct: 133 WIVDESKVVDTIGKFPLPVEVIPFGAGQVVKRFE----ARGYKPVLRLDAEGK-PVRTDE 187
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NY+VD I P+ ++ +L N GV+EHGLF++MVD I+G +G
Sbjct: 188 NNYVVDLHLERIEHPEALADDLINTVGVVEHGLFLHMVDQVIVGDPNG 235
>gi|282900457|ref|ZP_06308406.1| Ribose 5-phosphate isomerase [Cylindrospermopsis raciborskii
CS-505]
gi|281194650|gb|EFA69598.1| Ribose 5-phosphate isomerase [Cylindrospermopsis raciborskii
CS-505]
Length = 236
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 128/229 (55%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L D++ +G + IP+S +E K
Sbjct: 11 MKQEVGKAAASLVKSGSIVGLGTGSTTAYTIQFLGDRLKSGELKDIVGIPTSFQSEVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + V +D++IDG DE+D LIKG G A REK++ + AS+FIV+ D K
Sbjct: 71 HYGVPLTTLDAVDHIDIAIDGADEVDPNKNLIKGGGAAHTREKVVDYLASQFIVVVDSGK 130
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ + ++A+K+ G N ELR+ +G ++D GN +VD
Sbjct: 131 LVDHLGSTFAVPVEVIPMAITPVINAIKK----LGGNPELRMGVKKAGPVITDQGNMVVD 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + L NIPGV+E+G+F+N VD +IG DG+ V Q
Sbjct: 187 VRFDSIEDPVNLEKTLNNIPGVLENGIFVNCVDLVLIGEVIDGKPSVRQ 235
>gi|293365226|ref|ZP_06611943.1| ribose 5-phosphate isomerase [Streptococcus oralis ATCC 35037]
gi|307703765|ref|ZP_07640706.1| ribose 5-phosphate isomerase A [Streptococcus oralis ATCC 35037]
gi|291316676|gb|EFE57112.1| ribose 5-phosphate isomerase [Streptococcus oralis ATCC 35037]
gi|307622600|gb|EFO01596.1| ribose 5-phosphate isomerase A [Streptococcus oralis ATCC 35037]
Length = 227
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEVGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|260558280|ref|ZP_05830476.1| ribose-5-phosphate isomerase A [Enterococcus faecium C68]
gi|260075454|gb|EEW63760.1| ribose-5-phosphate isomerase A [Enterococcus faecium C68]
Length = 227
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 126/228 (55%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A A ++V DGM +G+GTGSTA + + ++ G R+ + +S T+
Sbjct: 1 MNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + + I I D S
Sbjct: 61 EKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKTIWIVDSS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG+ LP+E+ +G + L +E L + + +DGG+YI+D
Sbjct: 121 KLVDKLGKFPLPVEVIPYGSQQLLHIFEEKGFQPVLRTD-----ENGEVLTTDGGHYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I P+ ++ L + GV+EHGLF+NMV ++G+ G +L
Sbjct: 176 LHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKG-VEILD 222
>gi|94536844|ref|NP_033101.2| ribose-5-phosphate isomerase [Mus musculus]
gi|158518385|sp|P47968|RPIA_MOUSE RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=Phosphoriboisomerase
Length = 303
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A+ A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 68 MSKAEEAKKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQ 127
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 128 ARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIV 187
Query: 118 IGDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K L +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 188 IADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVAQ---KFGGEVELRMAVNKAGPVVT 244
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + PGV++ GLFINM + G DG V +K
Sbjct: 245 DNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 301
>gi|226946833|ref|YP_002801906.1| Ribose 5-phosphate isomerase [Azotobacter vinelandii DJ]
gi|226721760|gb|ACO80931.1| Ribose 5-phosphate isomerase [Azotobacter vinelandii DJ]
Length = 226
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ +++ +G+GTGSTA F+ LLA + + SS
Sbjct: 1 MTQDQLKQAVAQAALDHILPQLTRQSIIGVGTGSTANFFIDLLARYRMD--FDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H I +H +V ++ +DG DE + L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIEVHDLNNVVELEFYVDGADECNKHLELIKGGGAALTREKIVAAVARTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESKRVDFLG LP+E+ + G + R V+D
Sbjct: 119 CIADESKRVDFLGDFPLPVEVIPMARSHVARQ----LVMLGGDPVYREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D + I +P+ + ++ NI GV+ +GLF D ++GT +G +
Sbjct: 169 GNVILDVYNMQITNPRQLESDINNIVGVVCNGLFAARPADLLLLGTRNGVERI 221
>gi|256419808|ref|YP_003120461.1| ribose 5-phosphate isomerase [Chitinophaga pinensis DSM 2588]
gi|256034716|gb|ACU58260.1| ribose 5-phosphate isomerase [Chitinophaga pinensis DSM 2588]
Length = 224
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
V GM +G+GTGSTA + + + G ++ + +S +E IP+ S ++
Sbjct: 18 LVQPGMLVGLGTGSTAYWAIEKIGQMVKEGLNIRAVATSVASEQQAIALGIPITSFSEIQ 77
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+D+ IDG DEI L++IKG GGALLREKI+AHA+ R +++ DE K V LG+ LP+E
Sbjct: 78 QLDIDIDGADEISEDLQIIKGGGGALLREKIVAHASRRKVIVADERKYVKTLGKFPLPVE 137
Query: 137 IDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISG 196
I FG +++ L LR +++D GNYI+D FG I P+ +
Sbjct: 138 IIPFGWELVFKSIQA------LQGAPTLRTREDKPYITDNGNYILDCMFGAIEHPEQLHH 191
Query: 197 ELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+L + GV+E GLFIN+ II +GE L
Sbjct: 192 QLKAMTGVVETGLFINLKPTVIIAYENGEVKTL 224
>gi|120556344|ref|YP_960695.1| ribose-5-phosphate isomerase A [Marinobacter aquaeolei VT8]
gi|166200052|sp|A1U689|RPIA_MARAV RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|120326193|gb|ABM20508.1| ribose-5-phosphate isomerase [Marinobacter aquaeolei VT8]
Length = 225
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 117/233 (50%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ A+ A+ ++ +G+GTGSTA F+ LA+ N F + SS
Sbjct: 1 MTQDELKQAVAKAAVDHIAPHLEPSSIVGVGTGSTANFFIDYLAE-YRNDFD-GAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ V+ ++ +DG DE + L LIKG GGAL REKI+A A FI
Sbjct: 59 ATAERLKKHGIPVYDLNAVNEIEFYVDGADETNESLELIKGGGGALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK+V LG LP+E+ + + + G + R FV+D
Sbjct: 119 CIADESKQVGILGEFPLPVEVIPMARSHVGREIVK----LGGDPVYRDG------FVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I P ++ +L NI GV+ +GLF D ++GT DG +
Sbjct: 169 GNIIIDIHNMDISRPLVVEEKLNNIVGVVTNGLFARRPADLLLLGTRDGVKSI 221
>gi|294340907|emb|CAZ89302.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Thiomonas sp. 3As]
Length = 220
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A A+ V G +G+GTGST F+ LA I + + V S R+TE
Sbjct: 1 MTQDELKQQVAAAALTQVPQGEIIGVGTGSTVNFFIDALAG-IKHQIKGAVSSSERSTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I ++ +V+ + + +DG DEID+ +IKG GGAL REKIIA AA RFI I D
Sbjct: 60 LRA-HGITVYDLNEVAQLSVYVDGADEIDASGAMIKGGGGALTREKIIAEAAERFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG+ LP+E+ L+ G + R +V+D GN I
Sbjct: 119 QSKLVPVLGQFPLPVEVVPMARELVARRLR----ALGGDPRERSG------YVTDNGNLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGE 225
+D I P+ + IPGV+ GLF + + A+IGT++G
Sbjct: 169 LDVHGLEIAQPRDFETRVNQIPGVVTVGLFALRAANVALIGTAEGV 214
>gi|319938849|ref|ZP_08013213.1| ribose-5-phosphate isomerase A [Streptococcus anginosus 1_2_62CV]
gi|319811899|gb|EFW08165.1| ribose-5-phosphate isomerase A [Streptococcus anginosus 1_2_62CV]
Length = 229
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A +YV DGM +G+GTGSTA F+ + +I + + +S T
Sbjct: 2 ENLKKMAGIKAAEYVKDGMVVGLGTGSTAYYFVEEIGRRIKEEQLNITAVTTSSATSEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+D+ IKG GGALL EK++A +I + DES
Sbjct: 62 RRLGIPLKSIDEVDEVDVTVDGADEVDTNFNGIKGGGGALLMEKVVATPTKTYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG LP+E+ Q+G + + + R +V+D N+I+D
Sbjct: 122 KMVGKLGAFKLPVEVVQYGAEQLFRRFEHAGY------KPSFREKNGQRYVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P EL ++ GV+EHGLF MVD I+ +G +L+
Sbjct: 176 LDLGVIENPVEFGQELDHVVGVVEHGLFNQMVDMVIVAGGNG-VQILK 222
>gi|55981268|ref|YP_144565.1| ribose-5-phosphate isomerase A [Thermus thermophilus HB8]
gi|67461326|sp|Q5SIR5|RPIA_THET8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|51247842|pdb|1UJ5|A Chain A, Crystal Structure Of Thermus Thermophilus Ribose-5-
Phosphate Isomerase Complexed With Ribose-5-Phosphate
gi|55772681|dbj|BAD71122.1| ribose 5-phosphate isomerase [Thermus thermophilus HB8]
Length = 227
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 129/225 (57%), Gaps = 9/225 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKI 64
K+ AA AI YV DGM +G+GTGSTA+ ++ LA ++ G V +P+SR TE K
Sbjct: 9 KKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAKR 68
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL VDL+IDG DEI L LIKG GGALLREKI+ A FIVI D +K+
Sbjct: 69 EGIPLVDLPP-EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERVAKEFIVIADHTKK 127
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LGRG +P+EI FG TL A+ + L E LR +G + +DGG+ I D
Sbjct: 128 VPVLGRGPVPVEIVPFGYRATLKAIAD------LGGEPELRMDGDEFYFTDGGHLIADCR 181
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FG I DP + L IPGV+E GLF+ M A++ G +L
Sbjct: 182 FGPIGDPLGLHRALLEIPGVVETGLFVGMATRALVAGPFGVEELL 226
>gi|312278432|gb|ADQ63089.1| Ribose-5-phosphate isomerase A [Streptococcus thermophilus ND03]
Length = 226
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 127/229 (55%), Gaps = 6/229 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A +V DGM +G+GTGSTA F+ + +I G V + +S T
Sbjct: 2 DELKKLAGVYAAGFVEDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSTQTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+D+++DG DE+D +L IKG GGALL EKI+A ++I + DES
Sbjct: 62 EGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ G R+ G FV+D N+I+D
Sbjct: 122 KMVDQLGAFKLPVEVVQYGADRLY----LDFESKGYKPSFRVTEQG-NRFVTDMKNFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV+EHGLF MV+ I+ DG +V K
Sbjct: 177 LDLGKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKIVEVK 225
>gi|227550713|ref|ZP_03980762.1| ribose-5-phosphate isomerase A [Enterococcus faecium TX1330]
gi|227180174|gb|EEI61146.1| ribose-5-phosphate isomerase A [Enterococcus faecium TX1330]
Length = 231
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 8/232 (3%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNT 58
MDA + +K+ A A ++V DGM +G+GTGSTA + + ++ G R+ + +S T
Sbjct: 1 MDAKMNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNAT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + I I
Sbjct: 61 KEQAEKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D SK V LG+ LP+E+ +G + L E L + + +DGG+
Sbjct: 121 VDSSKLVHKLGKFPLPVEVIPYGSQQLLHIFDEKGFQPVLRTD-----ENGEVLTTDGGH 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
YI+D I P+ ++ L + GV+EHGLF+NMV ++G+ G +L
Sbjct: 176 YIIDLHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKG-VEILD 226
>gi|85059988|ref|YP_455690.1| ribose-5-phosphate isomerase A [Sodalis glossinidius str.
'morsitans']
gi|123518887|sp|Q2NRE0|RPIA_SODGM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|84780508|dbj|BAE75285.1| ribose 5-phosphate isomerase A [Sodalis glossinidius str.
'morsitans']
Length = 218
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA + + V S ++
Sbjct: 1 MTQDELKKAVGWAALKYVRLGTIVGVGTGSTAAHFIDALA-SVRHQIDGAVSSSEASSAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL +V S+D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 60 LQSL-GIPLFDLNEVDSLDIYVDGADEINGSMQMIKGGGAALTREKIIAAVARKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG LP+E+ G R V+D GN I
Sbjct: 119 SSKLVDVLGTFPLPVEVIPMARAWVARE----LVRLGGAPVYRQG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I D + ++ NIPGV+ GLF D A+IG+ G ++
Sbjct: 169 LDVHNLAIMDAVALEEQINNIPGVVTVGLFARRGADVALIGSEQGVKII 217
>gi|70733191|ref|YP_262964.1| ribose-5-phosphate isomerase A [Pseudomonas fluorescens Pf-5]
gi|123652221|sp|Q4K469|RPIA_PSEF5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|68347490|gb|AAY95096.1| ribose 5-phosphate isomerase [Pseudomonas fluorescens Pf-5]
Length = 223
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ + D +G+GTGSTA F+ LA + G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDLILPKLDDKSIVGVGTGSTANCFIDALA--LHKGTFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ IDG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYIDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPVLGNFPLPVEVIPMARSHVARE----LVKLGGDPVYREG------VITDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIILDVHNMQITNPVELESQINAIVGVVTNGLFAARPADVLLLGTAEGVKTL 221
>gi|15674215|ref|NP_268390.1| ribose-5-phosphate isomerase A [Lactococcus lactis subsp. lactis
Il1403]
gi|13878749|sp|Q9CDI7|RPIA_LACLA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|12725301|gb|AAK06331.1|AE006452_4 ribose 5-phosphate isomerase A [Lactococcus lactis subsp. lactis
Il1403]
Length = 224
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ +A ++V GM +G+GTGSTA F+ L +IA + + +S T +
Sbjct: 2 DNLKKQVGIKAAEFVKSGMVVGLGTGSTAAYFVEELGRRIAEEQLEITGVTTSNVTSSQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL++DG DEIDS L IKG G ALL EKI+A + +I I DES
Sbjct: 62 RALGIPLASIDEVDYVDLTVDGADEIDSSLNGIKGGGAALLMEKIVATYSKDYIWIVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K + LG +P+E+ +G + + G RL ++D ++I+D
Sbjct: 122 KLSENLGSFKIPVEVIPYGSQQVFKKFE----AAGYAPTWRLNEENE-RLITDMHHFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P+ ++ EL + GV+EHGLF NMV I+ ++G ++ K
Sbjct: 177 LHISQIKEPEKLAEELDLMGGVVEHGLFNNMVKKVIVAGNEG-VRIINK 224
>gi|293570678|ref|ZP_06681728.1| ribose 5-phosphate isomerase A [Enterococcus faecium E980]
gi|291609150|gb|EFF38422.1| ribose 5-phosphate isomerase A [Enterococcus faecium E980]
Length = 227
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A A ++V DGM +G+GTGSTA + + ++ G R+ + +S T+
Sbjct: 1 MNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + I I D S
Sbjct: 61 EKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG+ LP+E+ +G + L E L + + +DGG+YI+D
Sbjct: 121 KLVHKLGKFPLPVEVIPYGSQQLLRIFDEKGFQPVLRTD-----ENGEVLTTDGGHYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I P+ ++ L + GV+EHGLF+NMV ++G+ G +L
Sbjct: 176 LHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKG-VEILD 222
>gi|257885628|ref|ZP_05665281.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,501]
gi|261206986|ref|ZP_05921675.1| ribose-5-phosphate isomerase A [Enterococcus faecium TC 6]
gi|289565378|ref|ZP_06445828.1| ribose 5-phosphate isomerase A [Enterococcus faecium D344SRF]
gi|293567937|ref|ZP_06679278.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1071]
gi|294615399|ref|ZP_06695272.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1636]
gi|294618326|ref|ZP_06697907.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1679]
gi|257821484|gb|EEV48614.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,501]
gi|260078614|gb|EEW66316.1| ribose-5-phosphate isomerase A [Enterococcus faecium TC 6]
gi|289162868|gb|EFD10718.1| ribose 5-phosphate isomerase A [Enterococcus faecium D344SRF]
gi|291589522|gb|EFF21329.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1071]
gi|291591773|gb|EFF23409.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1636]
gi|291595420|gb|EFF26732.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1679]
Length = 227
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A A ++V DGM +G+GTGSTA + + ++ G R+ + +S T+
Sbjct: 1 MNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + I I D S
Sbjct: 61 EKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG+ LP+E+ +G + L +E L + + +DGG+YI+D
Sbjct: 121 KLVDKLGKFPLPVEVIPYGSQQLLHIFEEKGFQPVLRTD-----ENGEVLTTDGGHYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I P+ ++ L + GV+EHGLF+NMV ++G+ G +L
Sbjct: 176 LHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKG-VEILD 222
>gi|255542320|ref|XP_002512223.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
gi|223548184|gb|EEF49675.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
Length = 284
Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 132/228 (57%), Gaps = 6/228 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A+ YV GM LG+GTGSTA + + + + +G + IP+S+ TE
Sbjct: 52 TQDDLKKLAADKAVDYVKSGMILGLGTGSTAAFVVAKIGELLKSGELKDIIGIPTSKRTE 111
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL ++ +DL+IDG DE+D L L+KG GGALLREK++ A+ +F+V+
Sbjct: 112 EQALSLGIPLSVLDEHPKLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVA 171
Query: 120 DESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K VD + +P+E+ QF L LKE+ G++ +LRL +G +V+D
Sbjct: 172 DETKLVDGLGGSKLAMPVEVVQFCWKYNLIRLKELFKDEGVDAKLRLNEDGK-PYVTDNS 230
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NYIVD +F I D E+ ++ GV+EHGLF++M II G
Sbjct: 231 NYIVDLYFENPIKDGYAAGKEISSLEGVVEHGLFLDMATAVIIAGKTG 278
>gi|329913634|ref|ZP_08275983.1| Ribose 5-phosphate isomerase A [Oxalobacteraceae bacterium
IMCC9480]
gi|327545300|gb|EGF30545.1| Ribose 5-phosphate isomerase A [Oxalobacteraceae bacterium
IMCC9480]
Length = 223
Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AR A+ YVVDG +G+GTGSTA F+ LA + SS T
Sbjct: 1 MTQDELKQAVARAALDYVVDGDIIGVGTGSTANFFIDALA--GIKHRIKGAVASSEGTAE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I + DV+S+ + IDG DEI S +IKG G AL REKI+A A++FI I D
Sbjct: 59 RLMAHGINVVDLNDVTSMAVYIDGADEITSAGAMIKGGGAALTREKIVASVATKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LG LP+E+ + L GL RLR ++D GN I
Sbjct: 119 GSKLVDVLGAFPLPVEVIPMAQAVVMRKLA------GLGGTPRLRVKDGQTVLTDNGNII 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
+D I DP + + I GV+ GLF D A++GT+DG ++
Sbjct: 173 IDVLGLQITDPVAMELAINAIVGVVTVGLFAARGADVALLGTADGVRTLV 222
>gi|330982254|gb|EGH80357.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 223
Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS+
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKAHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT+DG +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTNDGVKTL 221
>gi|313619647|gb|EFR91283.1| ribose 5-phosphate isomerase A [Listeria innocua FSL S4-378]
Length = 224
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 7/228 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + G + + +S TE +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVQKGLNITGVATSIETEQQART 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEI+ + IKG GGALLREK++A A+S+ I + E K
Sbjct: 63 LGIPLKSLNDVTKIDVTIDGADEINQAFQGIKGGGGALLREKMVAQASSKNIWVVGEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIVDA 183
V LG+ LP+E+ FG + L+ E LR+ SG ++ ++ GNYI+D
Sbjct: 123 VKELGKFPLPLEVIPFGWKQIKRMLENDGV------ETTLRKQSSGEIYETNNGNYILDI 176
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P+ +L IPGV+EHGLF++ VD I G + GE +++K
Sbjct: 177 INQTFTNPEAWHEKLAGIPGVLEHGLFLHYVDIIICGKASGEIEIIKK 224
>gi|302187845|ref|ZP_07264518.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. syringae
642]
Length = 223
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS+
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKAHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPAELEAQINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|323467029|gb|ADX70716.1| Ribose-5-phosphate isomerase A [Lactobacillus helveticus H10]
Length = 230
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 116/232 (50%), Gaps = 11/232 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSS 55
MD ++K+ AA +A V GM LG+GTGST F+ L + N ++ +S
Sbjct: 1 MDKTEQDRLKKEAAEKAASMVKSGMILGVGTGSTVAFFIDALGKRKDNDGLKLKAIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++N + + DV VDL++DG D + L IKG GGAL EK +A + +
Sbjct: 61 NRSKNQLEGLGFKVSELADVDQVDLTVDGSDRVADNLDGIKGGGGALTLEKNVAINSKKI 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I DESK V LG LP+E+ + K+ GL + R+ + +++
Sbjct: 121 IWIVDESKLVHRLGGFPLPVEVLPISCEQNFKRFKQE----GLKPQWRM--DSDKRYITH 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GNYI+D +P P ++ L + GV+EHGLF++M D II SDG
Sbjct: 175 YGNYIIDLAADPVPAPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIE 226
>gi|261211573|ref|ZP_05925861.1| ribose 5-phosphate isomerase A [Vibrio sp. RC341]
gi|260839528|gb|EEX66154.1| ribose 5-phosphate isomerase A [Vibrio sp. RC341]
Length = 218
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKEEIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ +V+++D+ +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNEVAALDIYVDGADEINPERDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I P+ + ++ I GV+ GLF + D I GT G +
Sbjct: 169 LDVHNMKITHPKDLETKINGIAGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|169834003|ref|YP_001694282.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
Hungary19A-6]
gi|238688283|sp|B1IAZ7|RPIA_STRPI RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|168996505|gb|ACA37117.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
Hungary19A-6]
gi|327390180|gb|EGE88523.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae GA04375]
Length = 227
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EKI+A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKIVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVDKLGAFKLPVEVVQYGAEQIFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP + EL ++ GV+EHGLF MVD I+ DG ++ +
Sbjct: 176 LALDVIEDPIVFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTSR 224
>gi|182677872|ref|YP_001832018.1| ribose 5-phosphate isomerase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633755|gb|ACB94529.1| ribose 5-phosphate isomerase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 236
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 99/210 (47%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+ V GM LG+GTG+TA F+ LL K+A G V +P+S T + IPL + +
Sbjct: 19 ELVKPGMRLGLGTGTTAAHFVDLLGAKVAEGLDVLCVPTSERTRTQADTYKIPLSTLDAT 78
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+DL+IDG DE D +LRLIKG GGA LREK++A A+ R +VI D SK V LG+ LPI
Sbjct: 79 PELDLTIDGADEFDPQLRLIKGGGGAHLREKMVAAASKRMVVITDASKAVQTLGKFPLPI 138
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-SGLFVSDGGNYIVDAFFGFIPDPQII 194
EI+ FG T + A+ G +++LRR G +V+D G+YIVDA FG IPDP+ +
Sbjct: 139 EINVFGAEATRLMIIRAAAACGCQGDVKLRRIPSGGPYVTDNGHYIVDASFGAIPDPEKL 198
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
S L IPGVIEHGLFI + I S+G
Sbjct: 199 STALLEIPGVIEHGLFIGLAKAVICAGSEG 228
>gi|163790906|ref|ZP_02185330.1| ribose-5-phosphate isomerase A [Carnobacterium sp. AT7]
gi|159873859|gb|EDP67939.1| ribose-5-phosphate isomerase A [Carnobacterium sp. AT7]
Length = 223
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 133/225 (59%), Gaps = 5/225 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ +A +YV DGM +G+GTGSTA + L ++ G + + +S T+ +
Sbjct: 1 MNLKQLVGEKAAEYVKDGMVVGLGTGSTAYYMVEALGKRVKEGLTITGVTTSTRTKEQAE 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + ++V SVDL+IDG DEIDS+ + +KG GGALL EKI+A + + I I DESK
Sbjct: 61 KLGIPLKTIDEVESVDLTIDGADEIDSKYQGVKGGGGALLFEKIVADYSKKVIWIVDESK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ LG LPIE+ +G + + +E G +R G G +++DGG+YI+D
Sbjct: 121 MVETLGAFPLPIEVMPYGSQQLVRIFEEK----GFQPTMRKNDVG-GNYLTDGGHYIIDL 175
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I DP ++ L + GV+EHGLF++ V+ I+G + G ++
Sbjct: 176 HMTKIEDPHSLATWLDGLTGVMEHGLFLDRVNTIIVGRNTGLEII 220
>gi|307709006|ref|ZP_07645466.1| ribose 5-phosphate isomerase A [Streptococcus mitis SK564]
gi|307620342|gb|EFN99458.1| ribose 5-phosphate isomerase A [Streptococcus mitis SK564]
Length = 227
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+D++ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGFNIPLKSIDQVDFVDVTVDGADEVDNQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP I EL ++ GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIIFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|256851545|ref|ZP_05556934.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 27-2-CHN]
gi|260660968|ref|ZP_05861883.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 115-3-CHN]
gi|282932624|ref|ZP_06338040.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 208-1]
gi|297206360|ref|ZP_06923755.1| ribose-5-phosphate isomerase [Lactobacillus jensenii JV-V16]
gi|256616607|gb|EEU21795.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 27-2-CHN]
gi|260548690|gb|EEX24665.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 115-3-CHN]
gi|281303256|gb|EFA95442.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 208-1]
gi|297149486|gb|EFH29784.1| ribose-5-phosphate isomerase [Lactobacillus jensenii JV-V16]
Length = 230
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 11/236 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSS 55
MD ++K+ AA+ A V G LG+GTGST K F+ L ++ G ++ ++ +S
Sbjct: 1 MDKNTQDELKKEAAKVAADKVQAGSVLGVGTGSTVKFFIDWLGERKEKEGLTLKHIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + + DV VDL++DG D +DS+L IKG G AL EK +A + +
Sbjct: 61 SRSKKQLESYGFKVDELADVDEVDLTVDGADRVDSQLNGIKGGGAALTLEKNVAVNSKKN 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I DESK VD L LP+E+ + L++ GLN E R+ NG+ +
Sbjct: 121 IWIVDESKVVDHLSGFKLPVEVLPVSCMQVKKRLEKE----GLNPEFRM--NGNQKLTTH 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GNYI+D IP P ++ L + GV+EHGLF+N+ D I+ S+G +++
Sbjct: 175 YGNYILDLDVSPIPVPTGLADYLDHTVGVVEHGLFLNICDEVIVAKSNGTIQEIKR 230
>gi|218295121|ref|ZP_03495957.1| ribose 5-phosphate isomerase [Thermus aquaticus Y51MC23]
gi|218244324|gb|EED10849.1| ribose 5-phosphate isomerase [Thermus aquaticus Y51MC23]
Length = 227
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 128/225 (56%), Gaps = 9/225 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKI 64
K+ AA A+ YV DGM +G+GTGSTA+ ++ LA ++ G V+ +P+S T +
Sbjct: 9 KKEAAHAAVAYVEDGMVVGLGTGSTARYAVLELARRLREGELKAVRGVPTSEATRDLALK 68
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL VDL+IDG DEI L LIKG GGALLREKI+ A FIV+ D +K+
Sbjct: 69 EGIPLVDLPP-EGVDLAIDGADEIAPDLSLIKGLGGALLREKIVEATAREFIVVADHTKK 127
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LGRG++P+EI FG TL A+ L E LR +G + +D G+ I D
Sbjct: 128 VPVLGRGVVPVEIVPFGHQATLRAIA------HLGGEPALRMDGDEFYFTDNGHLIADCR 181
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FG I DP + L IPGV+E G+F+ + A+IG G +L
Sbjct: 182 FGPIGDPLGLHKALLEIPGVVETGIFVGLATRALIGGPMGVEELL 226
>gi|182681393|ref|YP_001829553.1| ribose-5-phosphate isomerase A [Xylella fastidiosa M23]
gi|182631503|gb|ACB92279.1| ribose 5-phosphate isomerase [Xylella fastidiosa M23]
Length = 237
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV + M +G+GTGST F+ L + SS + K
Sbjct: 25 EAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGHTPKR--IKGAVSSSEQSTAHLKQ 82
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D RLIKG G +L REKIIA A+ +FI I D +K+
Sbjct: 83 HGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQ 142
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ + + R ++D GN I+D
Sbjct: 143 VATLGKFPLPIEVIPMARSLVARQIMARTD---GQPVWREG------VITDNGNVILDVH 193
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D IIG+
Sbjct: 194 HLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSE 232
>gi|315281688|ref|ZP_07870260.1| ribose 5-phosphate isomerase A [Listeria marthii FSL S4-120]
gi|313614668|gb|EFR88240.1| ribose 5-phosphate isomerase A [Listeria marthii FSL S4-120]
Length = 224
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 133/231 (57%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A +A +++ DGM +G+GTGST + L D +A G +V + +S T
Sbjct: 2 MNQ---KKIAGEKACEWIKDGMIVGLGTGSTVYYTIEKLGDMVAKGLQVTGVATSEETAK 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A+A+ + I +
Sbjct: 59 QAEKLGIPLKSLNDVTEIDVTIDGADEIDADFQGIKGGGGALLREKMVANASLKNIWVVS 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K V LG LP+E+ FG + L++ L +++ ++V++ GNYI
Sbjct: 119 EEKFVRNLGEFPLPLEVIPFGWKQIQRELEKEDIETNLR-----KQSSGEVYVTNNGNYI 173
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D D + +L IPGV+EHGLF++ VD I G ++GE +++K
Sbjct: 174 LDIVNQTFTDTAMWQEKLAQIPGVVEHGLFLDYVDMIICGKANGEIELIKK 224
>gi|296446581|ref|ZP_06888523.1| ribose 5-phosphate isomerase [Methylosinus trichosporium OB3b]
gi|296255935|gb|EFH03020.1| ribose 5-phosphate isomerase [Methylosinus trichosporium OB3b]
Length = 236
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 99/224 (44%), Positives = 141/224 (62%), Gaps = 1/224 (0%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
A MK+ AA A+ V GM LG+GTGSTA F+ LL +++ G + +P+S T
Sbjct: 6 ADDMKKRAAAAALAAVAPGMRLGLGTGSTAAHFVALLGERVREGLDILCVPTSERTRAQA 65
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + ++ +DL++DG DE DS LRL+KG GGALLREKI+A A+ RFIV+ D +
Sbjct: 66 EALAIPLATLDEAPELDLTVDGADEFDSSLRLVKGGGGALLREKIVAAASRRFIVVADAT 125
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIV 181
KRV+ LG LP+EID FG T ++ A+ GL+ E+RLR G +FV+DGG+ ++
Sbjct: 126 KRVETLGAFPLPVEIDAFGARATRGHVERAAAALGLSGEVRLRSRPDGHVFVTDGGHLVL 185
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
D FG IP P+ ++ L IPGV+EHGLF+ + ++ G
Sbjct: 186 DCAFGAIPAPEALADRLAAIPGVVEHGLFLGLATAVVVAGPGGV 229
>gi|116513172|ref|YP_812079.1| ribose-5-phosphate isomerase A [Lactococcus lactis subsp. cremoris
SK11]
gi|122939887|sp|Q02VQ6|RPIA_LACLS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|116108826|gb|ABJ73966.1| ribose-5-phosphate isomerase [Lactococcus lactis subsp. cremoris
SK11]
Length = 224
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ +A ++V GM +G+GTGSTA F+ L ++A + + +S T
Sbjct: 2 ENLKKQVGIKAAEFVKSGMVVGLGTGSTAAYFVEELGRRVAEEQLEITGVTTSSVTSEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
K IPL S ++V VDL++DG DEIDS L IKG G ALL EKI+A + +I I DES
Sbjct: 62 KALGIPLASIDEVDYVDLTVDGADEIDSHLNGIKGGGAALLMEKIVATYSKDYIWIVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K + LG +P+E+ ++G + + A RL G ++D ++I+D
Sbjct: 122 KLSENLGSFKVPVEVIRYGSEQLFKEFERAAYA----PTWRLNEEGEK-LITDMQHFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I +PQ ++ EL + GV+EHGLF +MV I+ SDG ++
Sbjct: 177 LHIAKIENPQKLADELDLMVGVVEHGLFNDMVKKVIVAGSDGVKII 222
>gi|225351002|ref|ZP_03742025.1| hypothetical protein BIFPSEUDO_02583 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158458|gb|EEG71700.1| hypothetical protein BIFPSEUDO_02583 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 244
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + +GM G+GTGST + + L ++ G + +SR
Sbjct: 13 MDKAQQDALKKAAGIEAAKLIQNGMIAGLGTGSTVRFLVDELGRRVQEEGLEFTGVTTSR 72
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 73 RTQEQAEGYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV 132
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL G +D
Sbjct: 133 WIVDESKVVDTIGKFPLPVEVIPFGAGQVVKKFE----SRGYKPVLRLDAEG-QPVRTDE 187
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NY+VD I P+ ++ +L N GV+EHGLF++MVD I+G +G
Sbjct: 188 NNYVVDLHLECIEHPEALADDLINTVGVVEHGLFLHMVDQVIVGDPNG 235
>gi|254852470|ref|ZP_05241818.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL R2-503]
gi|300764185|ref|ZP_07074180.1| ribose 5-phosphate isomerase A [Listeria monocytogenes FSL N1-017]
gi|258605779|gb|EEW18387.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL R2-503]
gi|300515175|gb|EFK42227.1| ribose 5-phosphate isomerase A [Listeria monocytogenes FSL N1-017]
Length = 224
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 127/227 (55%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETSKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG LPIE+ FG + L++ L R++ ++V++ GNYI+D
Sbjct: 123 VRNLGNFPLPIEVIPFGWKQIERTLEKEHIQTILR-----RQSSGEIYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D ++ +L IPG++EHGLF+ VD + +GE +++K
Sbjct: 178 NQTFRDAEMWQEKLAQIPGIVEHGLFLRYVDIIVCAKENGEIELIKK 224
>gi|262404791|ref|ZP_06081346.1| ribose 5-phosphate isomerase A [Vibrio sp. RC586]
gi|262349823|gb|EEY98961.1| ribose 5-phosphate isomerase A [Vibrio sp. RC586]
Length = 218
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-SIKEEIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DV+++D+ +DG DEI+ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIRVYDCNDVAALDIYVDGADEINPERDMIKGGGAALTREKIVAAIAKKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNMI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I P+ + ++ I GV+ GLF + D I GT G +
Sbjct: 169 LDVHNMKIIHPKDLETKINGIAGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|325205742|gb|ADZ01195.1| ribose 5-phosphate isomerase A [Neisseria meningitidis M04-240196]
Length = 223
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHTLQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|16800043|ref|NP_470311.1| ribose-5-phosphate isomerase A [Listeria innocua Clip11262]
gi|32171698|sp|Q92D46|RPIA_LISIN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|16413433|emb|CAC96205.1| lin0974 [Listeria innocua Clip11262]
Length = 224
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 7/228 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + G + + +S TE +
Sbjct: 3 NQKKIAGEKACEWIEDGMVVGLGTGSTVYYTIEKLGEMVQKGLNITGVSTSIETEQQART 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEI+ + IKG GGALLREK++A A+S+ I + E K
Sbjct: 63 LGIPLKSLNDVTKIDVTIDGADEINQAFQGIKGGGGALLREKMVAQASSKNIWVVGEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIVDA 183
V LG+ LP+E+ FG + L+ E LR+ SG ++ ++ GNYI+D
Sbjct: 123 VTELGKFPLPLEVIPFGWKQIKRMLENDGV------ETTLRKQSSGEIYETNNGNYILDI 176
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P+ +L IPGV+EHGLF++ VD I G + GE +++K
Sbjct: 177 INQTFTNPEAWHEKLAGIPGVLEHGLFLHYVDIIICGKASGEIEIIKK 224
>gi|332305236|ref|YP_004433087.1| ribose 5-phosphate isomerase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172565|gb|AEE21819.1| ribose 5-phosphate isomerase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 218
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A+ A++YV G +G+GTGST F+ LA I + V S +TE
Sbjct: 1 MNQDDKKKAVAQAAVRYVEQGSIVGVGTGSTVNYFIEALAP-IKHDIVGAVSSSEASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + V + + +DG DEI +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LKAL-GIEVFDLNSVDQLSVYVDGADEITEHRHMIKGGGAALTREKIVAAVAQKFVCIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG LP+E+ + + + G + R ++D GN I
Sbjct: 119 DTKNVDVLGAFPLPVEVIPMARSYVAREIVK----LGGDPVYRQG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGE 225
+D I +P + L NI GV+ GLF D + G+ +G
Sbjct: 169 LDVHNLKILNPVELERTLNNIVGVVTSGLFAMRGADVVLTGSEEGV 214
>gi|71275763|ref|ZP_00652047.1| Ribose 5-phosphate isomerase [Xylella fastidiosa Dixon]
gi|71899382|ref|ZP_00681542.1| Ribose 5-phosphate isomerase [Xylella fastidiosa Ann-1]
gi|71163341|gb|EAO13059.1| Ribose 5-phosphate isomerase [Xylella fastidiosa Dixon]
gi|71730896|gb|EAO32967.1| Ribose 5-phosphate isomerase [Xylella fastidiosa Ann-1]
Length = 245
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV + M +G+GTGST F+ L + SS + K
Sbjct: 33 EAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGRTPKR--IKGAVSSSEQSTAHLKQ 90
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D RLIKG G +L REKIIA A+ +FI I D +K+
Sbjct: 91 HGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQ 150
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ + + R ++D GN I+D
Sbjct: 151 VATLGKFPLPIEVIPMARSLVARQIMARTD---GQPVWREG------VITDNGNVILDVH 201
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D IIG+
Sbjct: 202 HLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSE 240
>gi|227903472|ref|ZP_04021277.1| ribose-5-phosphate isomerase [Lactobacillus acidophilus ATCC 4796]
gi|227868792|gb|EEJ76213.1| ribose-5-phosphate isomerase [Lactobacillus acidophilus ATCC 4796]
Length = 230
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSS 55
MD ++K+ AA +A V GM LG+GTGST F+ L + + ++ +S
Sbjct: 1 MDKKEQDRLKKEAAEKAANMVQSGMILGVGTGSTVAFFIDALGKRKDEEDLKLKAIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + D+ DL++DG D + L IKG GGAL EK +A + +
Sbjct: 61 NRSKKQLESLGFEVSELADIDQADLTVDGSDRVADNLDGIKGGGGALTLEKNVAINSKKI 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
+ I DESK V L LP+E+ + ++ GL + R +G +++
Sbjct: 121 VWIVDESKLVHRLSGFPLPVEVLPISCEQNFRRFEQE----GLKPQ--WRTDGDKRYITH 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GNYI+D IP P ++ L + GV+EHGLF++M D II SDG
Sbjct: 175 YGNYIIDLAVDPIPAPHGLADYLDHTVGVVEHGLFLDMCDEVIISHSDGTIE 226
>gi|157151378|ref|YP_001450549.1| ribose-5-phosphate isomerase A [Streptococcus gordonii str. Challis
substr. CH1]
gi|189043829|sp|A8AXN9|RPIA_STRGC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|157076172|gb|ABV10855.1| ribose 5-phosphate isomerase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 225
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVTDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQIIAVTTSSVTSQQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+D IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDEVDLVDVTVDGADEVDPNFNGIKGGGGALLMEKVVATPTKSYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPAFRQKDGQRFVTDMKNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P + EL +I G++EHGLF MVD I+ G VL+
Sbjct: 176 LDLGVIENPIEFARELDHIVGIVEHGLFNQMVDKVIVAGKAG-VQVLE 222
>gi|157820863|ref|NP_001102102.1| ribose-5-phosphate isomerase [Rattus norvegicus]
gi|149036359|gb|EDL90977.1| ribose 5-phosphate isomerase A (predicted) [Rattus norvegicus]
Length = 303
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A+ A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 68 MSKAEEAKKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQ 127
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 128 ARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIV 187
Query: 118 IGDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K L +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 188 IADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVTQ---KFGGEVELRMAVNKAGPVVT 244
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + PGV++ GLFINM + G DG V +K
Sbjct: 245 DNGNFILDWKFDRVHKWGEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 301
>gi|257878719|ref|ZP_05658372.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,230,933]
gi|257881360|ref|ZP_05661013.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,502]
gi|257890578|ref|ZP_05670231.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,410]
gi|258615218|ref|ZP_05712988.1| ribose-5-phosphate isomerase A [Enterococcus faecium DO]
gi|293562940|ref|ZP_06677407.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1162]
gi|294623810|ref|ZP_06702638.1| ribose 5-phosphate isomerase A [Enterococcus faecium U0317]
gi|257812947|gb|EEV41705.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,230,933]
gi|257817018|gb|EEV44346.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,502]
gi|257826938|gb|EEV53564.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,410]
gi|291596764|gb|EFF27987.1| ribose 5-phosphate isomerase A [Enterococcus faecium U0317]
gi|291605066|gb|EFF34533.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1162]
Length = 227
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A A ++V DGM +G+GTGSTA + + ++ G R+ + +S T+
Sbjct: 1 MNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + I I D S
Sbjct: 61 EKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG+ LP+E+ +G + L +E L + + +DGG+YI+D
Sbjct: 121 KLVDKLGKFPLPVEVIPYGSQQLLHIFEEKRFQPVLRTD-----ENGEVLTTDGGHYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I P+ ++ L + GV+EHGLF+NMV ++G+ G +L
Sbjct: 176 LHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKG-VEILD 222
>gi|46907208|ref|YP_013597.1| ribose-5-phosphate isomerase A [Listeria monocytogenes serotype 4b
str. F2365]
gi|254823753|ref|ZP_05228754.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL J1-194]
gi|254931358|ref|ZP_05264717.1| ribose-5-phosphate isomerase A [Listeria monocytogenes HPB2262]
gi|254993128|ref|ZP_05275318.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL J2-064]
gi|67461455|sp|Q721J0|RPIA_LISMF RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|46880475|gb|AAT03774.1| ribose 5-phosphate isomerase A [Listeria monocytogenes serotype 4b
str. F2365]
gi|293582909|gb|EFF94941.1| ribose-5-phosphate isomerase A [Listeria monocytogenes HPB2262]
gi|293592974|gb|EFG00735.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL J1-194]
gi|332311383|gb|EGJ24478.1| Ribose-5-phosphate isomerase A [Listeria monocytogenes str. Scott
A]
Length = 224
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 130/227 (57%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETSKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ FG + L++ L R++ ++V++ GNYI+D
Sbjct: 123 VRNLGKFPLPIEVIPFGWKQIERTLEKEHIQTILR-----RQSSGEIYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D ++ +L IPG++EHGLF++ VD + ++GE +++K
Sbjct: 178 NQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANGEIELIKK 224
>gi|254482765|ref|ZP_05096003.1| ribose 5-phosphate isomerase A [marine gamma proteobacterium
HTCC2148]
gi|214037124|gb|EEB77793.1| ribose 5-phosphate isomerase A [marine gamma proteobacterium
HTCC2148]
Length = 247
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ ++K+ A+ A+ YV D LG+GTGSTA F+ LA+ G + SS
Sbjct: 23 MNQDELKQAVAQAALDYVRPKIDDDTVLGIGTGSTANLFIDCLAE--IRGSINATVASSE 80
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H IP++ V VD IDG DE +S L+LIKG G AL REKI+ A FI
Sbjct: 81 ASAERLKAHGIPVYDLNAVDQVDFYIDGADESNSALQLIKGGGAALTREKIVTAVAREFI 140
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V LG LP+E+ + G + R V+D
Sbjct: 141 CIADESKLVHTLGEFPLPVEVVPMARSHVARE----LVKLGGDPVYRDG------VVTDN 190
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
GN I+D + IP P ++ I GV+ +GLF + D ++GT++G +
Sbjct: 191 GNIILDVYNFAIPQPLATEAKINGITGVVTNGLFALKPADVLLLGTAEGVKTL 243
>gi|116617904|ref|YP_818275.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096751|gb|ABJ61902.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 231
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 123/232 (53%), Gaps = 10/232 (4%)
Query: 1 MDALQ-MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M+ K+ AA A+ Y+ M +G+GTGST F+ LA A+ + V + +S T
Sbjct: 1 MNEKNFQKKQAALAALNYIQTDMIIGLGTGSTVSYFLDALA---ASQYNVIGVTTSTITS 57
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C +IP+ + + +D+++DG DE+DS L IKG G ALL EKI+A + + I I
Sbjct: 58 QRCAELNIPIVDIDAIDHIDVTVDGADEVDSYLNGIKGGGAALLMEKIVAKNSKKNIWIV 117
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK + LG LP+E+ +G + L GL +LR + ++D G+Y
Sbjct: 118 DRSKVHNTLGSFPLPVEVIPYGSGQLLRQFANK----GLFPKLRRHPGNNQPVITDAGHY 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D I +P ++ L + GV+EHGLF+N+ D IIG D + ++
Sbjct: 174 IIDCHMTTINNPYALAEYLESQVGVVEHGLFLNICDRIIIG--DNTVEIKER 223
>gi|320540103|ref|ZP_08039758.1| ribose 5-phosphate isomerase, constitutive [Serratia symbiotica
str. Tucson]
gi|320029769|gb|EFW11793.1| ribose 5-phosphate isomerase, constitutive [Serratia symbiotica
str. Tucson]
Length = 218
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 119/230 (51%), Gaps = 13/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A++YV+ G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDEMKKAVGWAALEYVMPGTLVGVGTGSTASHFIYALG-SIKHQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V S+D+ +DG DEI+S +++IKG G AL REK+IA A +FI I D
Sbjct: 60 L-KSLGIPVFDSNEVDSLDIYVDGADEINSYMQMIKGGGAALTREKVIAAIARKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ANKQVDVLGKFPLPVEVIPMARSYVARE----LVKLGGLPEYRQN------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
+D I D + ++ +I GV+ GLF N D A++GT DG +++
Sbjct: 169 LDVHNLIITDAVALENQVNDIAGVVTVGLFANRCADVALVGTQDGVKVIV 218
>gi|297537378|ref|YP_003673147.1| ribose 5-phosphate isomerase [Methylotenera sp. 301]
gi|297256725|gb|ADI28570.1| ribose 5-phosphate isomerase [Methylotenera sp. 301]
Length = 219
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 116/231 (50%), Gaps = 16/231 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A+ A++YV +G +G+GTGSTA F+ LA K+ + + SS T
Sbjct: 4 TQDELKQQVAKAAVEYVKEG-IIGVGTGSTANFFIEELA-KVKHKIE-GAVASSEATAQR 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ H I + ++ +D+ +DG DEI L ++KG GGAL REKI+A A +FI I DE
Sbjct: 61 LRAHGIEVFDLNNIDGMDIYVDGADEITEHLHMLKGGGGALTREKIVAAVARQFICICDE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
+K V LG+ LP+E+ + G LR F +D GN I+
Sbjct: 121 TKYVPTLGKFPLPVEVLPMARSYVARE----LVKLGGQPALR-------NFTTDNGNVII 169
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
D I DP + ++ I GV+ +GLF + ++ T+DG +K
Sbjct: 170 DVHGLNITDPVAMEAKINQIVGVVTNGLFAARPANVLLLATADG-VKTYKK 219
>gi|170730130|ref|YP_001775563.1| ribose-5-phosphate isomerase A [Xylella fastidiosa M12]
gi|238687982|sp|B0U767|RPIA_XYLFM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|167964923|gb|ACA11933.1| Ribose-5-phosphate isomerase [Xylella fastidiosa M12]
Length = 215
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV + M +G+GTGST F+ L + SS + K
Sbjct: 3 EAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGRTPKR--IKGAVSSSEQSTAHLKQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D RLIKG G +L REKIIA A+ +FI I D +K+
Sbjct: 61 HGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ + + R ++D GN I+D
Sbjct: 121 VATLGKFPLPIEVIPMARSLVARQIMARTD---GQPVWREG------VITDNGNVILDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D IIG+
Sbjct: 172 HLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSE 210
>gi|91774485|ref|YP_544241.1| ribose-5-phosphate isomerase A [Methylobacillus flagellatus KT]
gi|91708472|gb|ABE48400.1| ribose-5-phosphate isomerase [Methylobacillus flagellatus KT]
Length = 219
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 15/231 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A+ AI+YV G +G+GTGSTA F+ LA K+ + + SS T
Sbjct: 3 TQDELKQQVAKAAIEYVKGG-IIGVGTGSTANFFIDELA-KVKDRID-GAVASSEATAQR 59
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ H I + DV +++ +DG DEI +L ++KG GGAL REKI+A A FI I D+
Sbjct: 60 LRGHGIKVFDLNDVDGMEIYVDGADEITEKLHMLKGGGGALTREKIVAACAKDFICICDQ 119
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
+K V LG+ LP+E+ G +LR F +D GN I+
Sbjct: 120 TKLVPVLGKFPLPVEVIPMAREYVARE----LVKLGGQPKLRD-------FTTDNGNVIL 168
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
D I DP + + I GV+ +GLF + + ++ T+DG + +
Sbjct: 169 DVHGLTITDPVALESRINEIVGVVTNGLFASRPANVLLLATADGVKTLTAR 219
>gi|226223593|ref|YP_002757700.1| ribose 5-phosphate isomerase [Listeria monocytogenes Clip81459]
gi|259494151|sp|C1L1P6|RPIA_LISMC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|225876055|emb|CAS04761.1| Putative ribose 5-phosphate isomerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 224
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 130/227 (57%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETSKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ FG + L++ L R++ ++V++ GNYI+D
Sbjct: 123 VRNLGKFPLPIEVIPFGWKQIERTLEKEHVQTILR-----RQSSGEIYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D ++ +L IPG++EHGLF++ VD + ++GE +++K
Sbjct: 178 NQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANGEIELIKK 224
>gi|125625265|ref|YP_001033748.1| ribose-5-phosphate isomerase A [Lactococcus lactis subsp. cremoris
MG1363]
gi|166200050|sp|A2RP28|RPIA_LACLM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|124494073|emb|CAL99074.1| ribose 5-phosphate isomerase A [Lactococcus lactis subsp. cremoris
MG1363]
gi|300072075|gb|ADJ61475.1| ribose-5-phosphate isomerase A [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 224
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 121/226 (53%), Gaps = 6/226 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ +A ++V GM +G+GTGSTA F+ L ++A + + +S T
Sbjct: 2 ENLKKQVGIKAAEFVKSGMVVGLGTGSTAAYFVEELGRRVAEEQLEITGVTTSSVTSEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
K IPL S ++V VDL++DG DEIDS L IKG G ALL EKI+A + +I I DES
Sbjct: 62 KALGIPLASIDEVDYVDLTVDGADEIDSHLNGIKGGGAALLMEKIVATYSKDYIWIVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K + LG +P+E+ +G + + A RL G ++D ++I+D
Sbjct: 122 KLSENLGSFKVPVEVITYGSEQLFKEFERAAYA----PTWRLNEEGEK-LITDMQHFIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I +PQ ++ EL + GV+EHGLF MV I+ SDG ++
Sbjct: 177 LHIAKIENPQKLADELDLMVGVVEHGLFNGMVKKVIVAGSDGVKII 222
>gi|325144799|gb|EGC67090.1| ribose 5-phosphate isomerase A [Neisseria meningitidis M01-240013]
Length = 223
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +FI I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|255264607|ref|ZP_05343949.1| ribose 5-phosphate isomerase A [Thalassiobium sp. R2A62]
gi|255106942|gb|EET49616.1| ribose 5-phosphate isomerase A [Thalassiobium sp. R2A62]
Length = 262
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 126/218 (57%), Gaps = 2/218 (0%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPE 73
YV GM +G+G+GSTA + L + + G +++ +P+S T + I + S +
Sbjct: 20 CDYVESGMRVGLGSGSTAAWLVKCLGELVREDGLKIKGVPTSTRTAALAREVGIEVISLD 79
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
+ +D++IDG DE D+ L LIKG GG+LL+EKI+A A+ + +VI D K+V+ LG L
Sbjct: 80 EAKWLDVTIDGADEYDANLNLIKGGGGSLLQEKIVATASDQMVVIADIGKQVETLGAFPL 139
Query: 134 PIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
PIE+ FG T + ++E L LR NG FV+D GN+I+D I + +
Sbjct: 140 PIEVIPFGWQTTKALVEESLISMDVLGRNSTLRLNGDTPFVTDEGNFILDLHLNRIANGR 199
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+S L +PGV+E+GLFI++ D +IG DG+ V
Sbjct: 200 QLSLVLNQMPGVVENGLFIDICDAVVIGYGDGKVEVRD 237
>gi|170077884|ref|YP_001734522.1| ribose-5-phosphate isomerase A [Synechococcus sp. PCC 7002]
gi|238692792|sp|B1XL11|RPIA_SYNP2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|169885553|gb|ACA99266.1| ribose 5-phosphate isomerase A [Synechococcus sp. PCC 7002]
Length = 233
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%)
Query: 1 MDALQ-MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRN 57
MDA+ MK+ + A V +G+GTGST + + +++A G + IP+S
Sbjct: 1 MDAVTVMKQEVGKVAAALVQSNSVVGLGTGSTTAYAIQYIGERLAAGELENIVGIPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
E K + IPL S + V +D++IDG DE+D + LIKG G A REK++ A++F+V
Sbjct: 61 AEVLAKQYKIPLSSLDAVDHIDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVV 120
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D K VD +LP+E+ + + G ELR+ +G V+D
Sbjct: 121 VVDSGKLVDRLGSTFLLPVEVIPMAITPVMRQ----LEALGGKPELRMGVKKAGPVVTDE 176
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
GN +VD F I DP + ++ NIPGV+E+GLF+ + D ++G DG+ V +
Sbjct: 177 GNLVVDLKFAGIDDPATLEQKINNIPGVLENGLFVGVADVILVGEIIDGQPRVRE 231
>gi|296136750|ref|YP_003643992.1| ribose 5-phosphate isomerase [Thiomonas intermedia K12]
gi|295796872|gb|ADG31662.1| ribose 5-phosphate isomerase [Thiomonas intermedia K12]
Length = 220
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 116/226 (51%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A A+ V G +G+GTGST F+ LA I + V S R+TE
Sbjct: 1 MTQDELKQQVAAAALTQVPQGEIIGVGTGSTVNFFIDALAG-IKYQIKGAVSSSERSTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I ++ +V+ + + +DG DEID+ +IKG GGAL REKIIA AA RFI I D
Sbjct: 60 LRA-HGITVYDLNEVAQLSVYVDGADEIDASGAMIKGGGGALTREKIIAEAAERFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG+ LP+E+ L+ G + R +V+D GN I
Sbjct: 119 QSKLVPVLGQFPLPVEVVPMARELVARRLR----ALGGDPRERSG------YVTDNGNLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGE 225
+D I P+ + IPGV+ GLF + + A+IGT++G
Sbjct: 169 LDVHGLEIAQPREFETRVNQIPGVVTVGLFALRAANVALIGTAEGV 214
>gi|330967061|gb|EGH67321.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 223
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKH--KGAFDGGVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVVPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + + I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEASINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|325127150|gb|EGC50100.1| ribose 5-phosphate isomerase A [Neisseria meningitidis N1568]
gi|325130589|gb|EGC53336.1| ribose 5-phosphate isomerase A [Neisseria meningitidis OX99.30304]
gi|325132672|gb|EGC55357.1| ribose 5-phosphate isomerase A [Neisseria meningitidis M6190]
gi|325138560|gb|EGC61123.1| ribose 5-phosphate isomerase A [Neisseria meningitidis ES14902]
Length = 223
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +FI I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|15900715|ref|NP_345319.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae TIGR4]
gi|30173364|sp|Q97RI7|RPIA_STRPN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|14972301|gb|AAK74959.1| ribose 5-phosphate isomerase [Streptococcus pneumoniae TIGR4]
Length = 227
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A +++ DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGITAAEFIKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRHFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P EL ++ GV+EHGLF MVD I+ DG + K
Sbjct: 176 LALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSK 224
>gi|301155285|emb|CBW14751.1| ribose 5-phosphate isomerase, constitutive [Haemophilus
parainfluenzae T3T1]
Length = 219
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AAR A++YV +G+G+GST F+ L + + +S+ +E
Sbjct: 1 MDQLEMKKLAARAALKYVKPDTIVGVGSGSTVNCFIEALGEL--KDQIQGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFSANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G E R V+D GN
Sbjct: 119 ASKQVDVLGSTFPLPVEVIPMARSQVGRK----LVSLGGAPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT G ++
Sbjct: 169 ILDVHNFAILNPVEMEKELNNVAGVVTNGIFALRGADIVIVGTPGGAKII 218
>gi|118602268|ref|YP_903483.1| ribose-5-phosphate isomerase A [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166229235|sp|A1AVQ5|RPIA_RUTMC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|118567207|gb|ABL02012.1| ribose-5-phosphate isomerase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 223
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 12/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK A+ A+++VV +G+GTGST F+ LA KI N + I SS+ T
Sbjct: 1 MTQDEMKFAVAQAALKHVVKDTIIGVGTGSTTNFFIDALA-KIKNEIK-GAIASSKATRQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + I + +V ++ + IDG DE D L LIKG GGAL+REKI+A A++FI I D
Sbjct: 59 RLESYDIKVFDLNEVETISVYIDGADESDDGLNLIKGGGGALMREKIVAAVANQFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V +G LP+E+ N + + G +R F++D GN I
Sbjct: 119 ESKLVTIMGDFPLPVEVIPMASNYVKYQISQR---IGGTPTVREN------FITDNGNLI 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P+++ +L +I GV+ +GLF N D ++GTS+G +V
Sbjct: 170 LDIKDLKITNPKVMETKLNSITGVVANGLFANRGADILLLGTSNGVKIV 218
>gi|327275315|ref|XP_003222419.1| PREDICTED: ribose-5-phosphate isomerase-like [Anolis carolinensis]
Length = 235
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 9/236 (3%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M + KR AA A+ +V LG+G+GST + LA+++ + IP+S
Sbjct: 1 MT-EEAKRLAAGAAVDNHVQTNHVLGIGSGSTIVHAVHRLAERVKQENLSIVCIPTSFQA 59
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + L + ++++IDG DE+D L LIKG GG L +EKI+A A FIVI
Sbjct: 60 RQLILQNGLTLSDLDRHPELNVAIDGADEVDMDLNLIKGGGGCLTQEKIVAGYAKSFIVI 119
Query: 119 GDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D K+ + + +PIE+ AL + FG ELR+ N +G V+D
Sbjct: 120 ADYRKKSEHLGEQWKKGIPIEVIPMAYVPITRALAKR---FGGVAELRMAVNKAGPVVTD 176
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN+++D F + + + ++ + IPGV+E GLFINM + G DG V K
Sbjct: 177 NGNFLLDWKFDKVHNWKEVNMAIKMIPGVVETGLFINMAERVYFGMEDGSVSVRDK 232
>gi|153840273|ref|ZP_01992940.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus AQ3810]
gi|149746061|gb|EDM57191.1| ribose 5-phosphate isomerase A [Vibrio parahaemolyticus AQ3810]
Length = 218
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDDIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +D+ +DG DEI+ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 L-KELGIEVFECNDVIKLDVYVDGADEINPAREMIKGGGAALTREKIVAAISEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG+ LP+E+ + G + R V+D GN I
Sbjct: 119 DTKAVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I P+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHNMQITTPKEMEDKINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|283455411|ref|YP_003359975.1| ribose 5-phosphate isomerase [Bifidobacterium dentium Bd1]
gi|309802866|ref|ZP_07696967.1| ribose 5-phosphate isomerase A [Bifidobacterium dentium JCVIHMP022]
gi|283102045|gb|ADB09151.1| rpi Ribose 5-phosphate isomerase [Bifidobacterium dentium Bd1]
gi|308220333|gb|EFO76644.1| ribose 5-phosphate isomerase A [Bifidobacterium dentium JCVIHMP022]
Length = 232
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + GM G+GTGST + + L ++ G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLIQSGMIAGLGTGSTVRFLVDELGRRVKEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQEQAEGYGIKIVDIDDVDHIDVTIDGADEVDKDFNGIKGGGAALLWEKIVATNSNKIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGQVIKKFE----SRGYKPVLRLDAEG-QPVRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
NY+VD I P+ ++ +L GV+EHGLF++MVD I+G +G
Sbjct: 176 NNYVVDLHLERIDHPEDLAEDLITTVGVVEHGLFLHMVDQVIVGDPNG 223
>gi|126725620|ref|ZP_01741462.1| ribose 5-phosphate isomerase [Rhodobacterales bacterium HTCC2150]
gi|126704824|gb|EBA03915.1| ribose 5-phosphate isomerase [Rhodobacterales bacterium HTCC2150]
Length = 262
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 85/218 (38%), Positives = 130/218 (59%), Gaps = 2/218 (0%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
++YV DGM +G+GTGSTA + +L + + G +V +P+S T + +IP+ + +
Sbjct: 20 VEYVQDGMRIGLGTGSTAAWLVKVLGEMVRDEGLKVMGVPTSTRTAELARAENIPVVTLD 79
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
+ +DL+IDG DE D L LIKG GGALL+EKI+A A+ + IVI D SKRVD LG L
Sbjct: 80 EAKWLDLTIDGADEFDGELNLIKGGGGALLQEKIVATASDQMIVIADASKRVDTLGAFPL 139
Query: 134 PIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
PIE+ FG + + ++E + + LR N F++D GN+I+D I + +
Sbjct: 140 PIEVIPFGWQASKTLVEEALISLDVMGRDSSLRMNRDKPFLTDEGNFILDLNLRRIGNAR 199
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++ L IPGV+E+GLFI++ D I+G + + V
Sbjct: 200 QLALVLNQIPGVVENGLFIDICDVVIVGHGNSKVEVYD 237
>gi|28872401|ref|NP_795020.1| ribose 5-phosphate isomerase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213972000|ref|ZP_03400097.1| ribose 5-phosphate isomerase [Pseudomonas syringae pv. tomato T1]
gi|301384891|ref|ZP_07233309.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. tomato
Max13]
gi|302063037|ref|ZP_07254578.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. tomato
K40]
gi|302133852|ref|ZP_07259842.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|38258465|sp|Q87UK7|RPIA_PSESM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|28855656|gb|AAO58715.1| ribose 5-phosphate isomerase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213923262|gb|EEB56860.1| ribose 5-phosphate isomerase [Pseudomonas syringae pv. tomato T1]
Length = 223
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVVPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + + I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEASINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|260771940|ref|ZP_05880858.1| ribose 5-phosphate isomerase A [Vibrio metschnikovii CIP 69.14]
gi|260613232|gb|EEX38433.1| ribose 5-phosphate isomerase A [Vibrio metschnikovii CIP 69.14]
Length = 218
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+ YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALNYVKKGSIVGVGTGSTVNHFIDALG-SIKDDIQGAVSSSLASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ D+ ++D+ +DG DEI+++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 LQAL-GIKVYDCNDIEALDVYVDGADEINAQREMIKGGGAALTREKIVAAIAKQFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V LG+ LP+E+ + L + G R ++D GN I
Sbjct: 119 GSKAVPVLGKFPLPVEVIPMARSYVSRELSK----LGGKPVYREG------VITDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I + + ++ +I GV+ +GLF + D I GT G +
Sbjct: 169 LDVHDLHITQAKALEDKINSITGVVTNGLFAHRGADVVITGTEQGAKI 216
>gi|254832279|ref|ZP_05236934.1| ribose-5-phosphate isomerase A [Listeria monocytogenes 10403S]
Length = 224
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 130/227 (57%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGIPLKSLNDVTEIDITIDGADEIDTVFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ FG + L++ L +++ ++V++ GNYI+D
Sbjct: 123 VRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLR-----KQSSGEVYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D ++ +L IPG++EHGLF++ VD I ++GE +++K
Sbjct: 178 NQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK 224
>gi|9107130|gb|AAF84817.1|AE004020_8 ribose-5-phosphate isomerase A [Xylella fastidiosa 9a5c]
Length = 245
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV + M +G+GTGST F+ L + SS + K
Sbjct: 33 EAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGRTPKR--IKGAVSSSEQSTAHLKQ 90
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D RLIKG G +L REKIIA A+ +FI I D +K+
Sbjct: 91 HGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQ 150
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ + + R ++D GN I+D
Sbjct: 151 VATLGKLPLPIEVIPMARSLVARQIMARTD---GQPVWREG------VITDNGNVILDVH 201
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D IIG+
Sbjct: 202 HLRITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSE 240
>gi|330891625|gb|EGH24286.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. mori str.
301020]
Length = 223
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS
Sbjct: 1 MNQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTTEGVKTL 221
>gi|148657023|ref|YP_001277228.1| ribose-5-phosphate isomerase A [Roseiflexus sp. RS-1]
gi|166991519|sp|A5UXC5|RPIA_ROSS1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|148569133|gb|ABQ91278.1| ribose-5-phosphate isomerase [Roseiflexus sp. RS-1]
Length = 233
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 96/231 (41%), Positives = 136/231 (58%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
MD ++ AA A+++V GMT+G+GTGSTA + LA ++A+G RV +P+S T
Sbjct: 1 MDDNLYRQRAAEHALRHVESGMTIGLGTGSTATFMLYGLAARLADGRLQRVTGVPTSEVT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IPL + + +DL++DG DEID +LRLIKG GGA+LREKI+A +A+RF+V+
Sbjct: 61 AALARELGIPLTTLDRQPHLDLALDGADEIDPQLRLIKGLGGAMLREKIVAASAARFVVM 120
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
SK V+ R LP+E+ FG+ LK G LR R FV+D G
Sbjct: 121 AAVSKCVERLGERSPLPVEVVAFGLPLCARRLK----ALGGAPALR-RDRSGAPFVTDEG 175
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N I+D FG I DP+ ++ +C IPGV+ HGLF+ M A+I DG +
Sbjct: 176 NLILDCNFGIIADPEALAASICAIPGVVAHGLFLGMASLAVIAGPDGIVEL 226
>gi|323491216|ref|ZP_08096402.1| ribose-5-phosphate isomerase A [Vibrio brasiliensis LMG 20546]
gi|323314584|gb|EGA67662.1| ribose-5-phosphate isomerase A [Vibrio brasiliensis LMG 20546]
Length = 218
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ LA + + + V S +TE
Sbjct: 1 MTQDEMKKEAGWAALKYVEKGSIVGVGTGSTVNHFIDALA-TMKDDIKGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V+ +D+ +DG DEI++ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 LKGL-GIEVFDCNEVAMLDIYVDGADEINASRDMIKGGGAALTREKIVAAISEKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + G + R ++D GN I
Sbjct: 119 NTKAVDVLGEFPLPVEVIPMARSYVARQ----LVKLGGDPAYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I DP+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHGMKITDPKDLEDKINAIAGVVTVGLFAHRGADIVITGTPEGAKI 216
>gi|291457245|ref|ZP_06596635.1| ribose 5-phosphate isomerase A [Bifidobacterium breve DSM 20213]
gi|291381080|gb|EFE88598.1| ribose 5-phosphate isomerase A [Bifidobacterium breve DSM 20213]
Length = 232
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 122/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSR 56
MD +K+ A A + + DGM G+GTGST K + L + G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLIEDGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQAQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + +E G LRL G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGHVIKKFEER----GYKPVLRLDAEGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 176 NNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
>gi|224031541|gb|ACN34846.1| unknown [Zea mays]
Length = 580
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 100/243 (41%), Positives = 132/243 (54%), Gaps = 13/243 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA+++V GMTLG+GTGSTA + L D + G V +P+S TE
Sbjct: 15 TQDELKRVAAHRAVEFVESGMTLGLGTGSTAAHALDRLGDLLRAGALPGVAGVPTSLKTE 74
Query: 60 NFCKIHHIPLHSPEDVS--SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
IPL + S S+ LSIDG DE+D L L+KG GG+LLREK+I A RF+V
Sbjct: 75 AHAARVGIPLLPLDAASGASIRLSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGDRFVV 134
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVAS-CFGLNEELRL-----RRNGSG 170
I DESK V G +P+E+ FG TL +++V G + LR +
Sbjct: 135 IVDESKLVPRLGCTGAVPVEVIPFGAPHTLGLIRKVFDGVPGFHARLRTVPAANGEDSDA 194
Query: 171 LFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F++D GNYIV+ FF G D IS L I GVIEHG+F+ M I+ DG V
Sbjct: 195 PFLTDNGNYIVEMFFEDGIRGDLLDISDRLLRITGVIEHGMFLGMATTVIVANKDGTVTV 254
Query: 229 LQK 231
+ K
Sbjct: 255 INK 257
>gi|15677364|ref|NP_274519.1| ribose-5-phosphate isomerase A [Neisseria meningitidis MC58]
gi|30173380|sp|Q9JYM6|RPIA_NEIMB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|7226754|gb|AAF41867.1| ribose 5-phosphate isomerase A [Neisseria meningitidis MC58]
gi|316986031|gb|EFV64968.1| ribose 5-phosphate isomerase A [Neisseria meningitidis H44/76]
gi|325140661|gb|EGC63178.1| ribose 5-phosphate isomerase A [Neisseria meningitidis CU385]
gi|325199886|gb|ADY95341.1| ribose 5-phosphate isomerase A [Neisseria meningitidis H44/76]
Length = 223
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSGEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +FI I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|149926862|ref|ZP_01915121.1| ribose 5-phosphate isomerase [Limnobacter sp. MED105]
gi|149824414|gb|EDM83632.1| ribose 5-phosphate isomerase [Limnobacter sp. MED105]
Length = 217
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MDAL +K+ A+ A+ YV G LG+GTGST F+ LA+ + SS +E
Sbjct: 1 MDALTLKKMVAKAALTYVQPGTVLGVGTGSTVDCFIDALAESGLQ--LKGAVSSSVRSEK 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +P+ DV S+ + +DG DE+D LIKG GGA REKI+A + +F+ I D
Sbjct: 59 KLREIGVPIVDMNDVESLSIYVDGADEVDPANCLIKGGGGANTREKIVADISDKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG LP+E+ N + G ++R F++D GN I
Sbjct: 119 QSKLVQVLGAFPLPVEVLPMASNAIARK----LTALGGQVKVREG------FITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
+D I DP + E+ + PGV+ +GLF I D +I T+DG +
Sbjct: 169 LDVAGLKITDPVAMEKEINHWPGVVTNGLFAIRKADVVLIATADGIKTL 217
>gi|161870372|ref|YP_001599542.1| ribose-5-phosphate isomerase A [Neisseria meningitidis 053442]
gi|218768493|ref|YP_002343005.1| ribose-5-phosphate isomerase A [Neisseria meningitidis Z2491]
gi|254805277|ref|YP_003083498.1| ribose 5-phosphate isomerase A [Neisseria meningitidis alpha14]
gi|30173378|sp|Q9JTM5|RPIA_NEIMA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|189043820|sp|A9M0U5|RPIA_NEIM0 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|121052501|emb|CAM08840.1| ribose 5-phosphate isomerase A [Neisseria meningitidis Z2491]
gi|161595925|gb|ABX73585.1| ribose 5-phosphate isomerase A [Neisseria meningitidis 053442]
gi|254668819|emb|CBA06822.1| ribose 5-phosphate isomerase A [Neisseria meningitidis alpha14]
gi|261392242|emb|CAX49762.1| ribose-5-phosphate isomerase A (phosphoriboisomerase A; PRI)
[Neisseria meningitidis 8013]
gi|308389656|gb|ADO31976.1| ribose 5-phosphate isomerase A [Neisseria meningitidis alpha710]
gi|319410741|emb|CBY91124.1| ribose-5-phosphate isomerase A (phosphoriboisomerase A; PRI)
[Neisseria meningitidis WUE 2594]
gi|325136595|gb|EGC59196.1| ribose 5-phosphate isomerase A [Neisseria meningitidis M0579]
gi|325201797|gb|ADY97251.1| ribose 5-phosphate isomerase A [Neisseria meningitidis M01-240149]
gi|325208450|gb|ADZ03902.1| ribose 5-phosphate isomerase A [Neisseria meningitidis NZ-05/33]
Length = 223
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|330974553|gb|EGH74619.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS+
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKAHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|330874156|gb|EGH08305.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILQKLDDKSIVGVGTGSTANCFIDALAKH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVVPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + + I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEASINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|194289989|ref|YP_002005896.1| ribose-5-phosphate isomerase a [Cupriavidus taiwanensis LMG 19424]
gi|238692736|sp|B3R1I3|RPIA_CUPTR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|193223824|emb|CAQ69831.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Cupriavidus taiwanensis LMG 19424]
Length = 228
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A + F V S
Sbjct: 1 MTQDELKALVAQAAADYVKQEVPEGAVLGVGTGSTANLFIDAVAA-FKDRFAGAVSSSEA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+T + H + +V + + +DG DEID+ ++KG GGAL REKI+A A RF+
Sbjct: 60 STRRL-QQHGFKVLDLNEVDEIPVYVDGADEIDASGAMVKGGGGALTREKIVASVARRFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V +G LP+E+ G LR+ + G G++ +D
Sbjct: 119 CIADGSKLVQTMGAFPLPVEVVPMARAAVARK----LQALGGQPRLRMTKEG-GIYKTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
GN I+D I DP+ + + +PGV+ GLF + D ++GT DG
Sbjct: 174 GNVILDVAGLKIDDPRGLEQTINQVPGVVTVGLFALRGADVLLLGTGDGVQRT 226
>gi|116872376|ref|YP_849157.1| ribose 5-phosphate isomerase A [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741254|emb|CAK20376.1| ribose 5-phosphate isomerase A [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ A +A +V DGM +G+GTGST + L + + +G + I +S T
Sbjct: 1 MNQ---KKIAGEKACGWVKDGMVVGLGTGSTVYYTIEKLGEMVRDGLNITGIATSEETAI 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IPL S DV +D++IDG DE++ + IKG GGALLREK++A A+ I + +
Sbjct: 58 QAKKLGIPLKSLNDVKQIDVTIDGADEVNKDFQGIKGGGGALLREKMVAAASLMNIWVVE 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
E K V+ LG LPIE+ FG + +L++ A E LR+N SG ++ ++ GNY
Sbjct: 118 EKKLVEELGEFSLPIEVIPFGWKQIKWSLEKEAI------ETELRKNDSGKVYQTNNGNY 171
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D + +P +L IPG++EHGLF++ VD I G ++GE +V++K
Sbjct: 172 ILDIKNQILTNPVEWQEKLAGIPGIVEHGLFLDYVDIVICGKANGEAIVIKK 223
>gi|115470849|ref|NP_001059023.1| Os07g0176900 [Oryza sativa Japonica Group]
gi|34393835|dbj|BAC83439.1| putative ribose-5-phosphate isomerase [Oryza sativa Japonica Group]
gi|113610559|dbj|BAF20937.1| Os07g0176900 [Oryza sativa Japonica Group]
gi|125599305|gb|EAZ38881.1| hypothetical protein OsJ_23301 [Oryza sativa Japonica Group]
gi|215765883|dbj|BAG87580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199177|gb|EEC81604.1| hypothetical protein OsI_25096 [Oryza sativa Indica Group]
Length = 280
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 131/229 (57%), Gaps = 6/229 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
+KR AA RA++ V GM LG+GTGSTA + + +A+G + +P+S+ T
Sbjct: 48 TQDDLKRLAAVRAVEQVESGMVLGLGTGSTAAFAVAEIGALLASGKLSGIVGVPTSKRTF 107
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + +D +DL+IDG DE+D L L+KG GGALLREK++ A+ +FIV+
Sbjct: 108 EQAQSLGIPLSTLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVV 167
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K V LG +P+E+ QF L+++ + G +LRL G +V+D
Sbjct: 168 DETKLVTGLGGSGLAMPVEVVQFCWKYNQVRLQDLFNDEGCEAKLRL-DEGGKPYVTDNS 226
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
NYIVD +F I D E+ + GV+EHGLF++M II +DG
Sbjct: 227 NYIVDLYFKTPIKDALAAGKEISALEGVVEHGLFLDMATSVIIAGTDGV 275
>gi|325204488|gb|ADY99941.1| ribose 5-phosphate isomerase A [Neisseria meningitidis M01-240355]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|313668105|ref|YP_004048389.1| ribose 5-phosphate isomerase A [Neisseria lactamica ST-640]
gi|313005567|emb|CBN87003.1| ribose 5-phosphate isomerase A [Neisseria lactamica 020-06]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSGEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +FI I DE
Sbjct: 61 LARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKII 218
>gi|161507117|ref|YP_001577071.1| ribose-5-phosphate isomerase A [Lactobacillus helveticus DPC 4571]
gi|172048200|sp|A8YU42|RPIA_LACH4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|160348106|gb|ABX26780.1| ribose-5-phosphate isomerase [Lactobacillus helveticus DPC 4571]
Length = 230
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
++K+ AA +A V GM LG+GTGST F+ L + N ++ +S ++N
Sbjct: 6 QDRLKKEAAEKAASMVKSGMILGVGTGSTVAFFIDALGKRKDNDGLKLKAIVTTSNRSKN 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + DV VDL++DG D + L IKG GGAL EK +A + + I I D
Sbjct: 66 QLEGLGFKVSELADVDQVDLTVDGSDRVADNLDGIKGGGGALTLEKNVAINSKKIIWIVD 125
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG LP+E+ + K+ GL + R+ + +++ GNYI
Sbjct: 126 ESKLVHRLGGFPLPVEVLPISCEQNFKRFKQE----GLKPQWRM--DSDKRYITHYGNYI 179
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+D +P P ++ L + GV+EHGLF++M D II SDG
Sbjct: 180 IDLAADPVPAPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIE 226
>gi|301624375|ref|XP_002941480.1| PREDICTED: ribose-5-phosphate isomerase isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 247
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 9/236 (3%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M + KR A A+ +V + LG+G+GST + LA+++ + +P+S
Sbjct: 13 MT-EEAKRLAGWAAVDNHVKNNQALGIGSGSTIVHAVNRLAERVKQENLNIVCVPTSFQA 71
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + L + +D++IDG DE+DS L LIKG GG L +EKI+A A FIVI
Sbjct: 72 RQLILQNGLVLSDLDRHPELDVAIDGADEVDSELNLIKGGGGCLAQEKIVAGCAKSFIVI 131
Query: 119 GDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D K + +PIE+ + AL+ FG ELR+ + +G V+D
Sbjct: 132 ADYRKDSKNFGEQWKKGVPIEVIPMAYVPVIKALQSR---FGGVAELRMAVSKAGPVVTD 188
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN+++D F + + + ++ E+ IPGV++ GLFINM + G DG + K
Sbjct: 189 NGNFLLDWKFDKVHEWKAVNTEIKMIPGVVDTGLFINMAERVYFGMEDGTVKIRDK 244
>gi|254673238|emb|CBA08233.1| ribose 5-phosphate isomerase A [Neisseria meningitidis alpha275]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSGEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +FI I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|309378709|emb|CBX22659.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKII 218
>gi|261400730|ref|ZP_05986855.1| ribose 5-phosphate isomerase A [Neisseria lactamica ATCC 23970]
gi|296314049|ref|ZP_06863990.1| ribose 5-phosphate isomerase A [Neisseria polysaccharea ATCC 43768]
gi|269209495|gb|EEZ75950.1| ribose 5-phosphate isomerase A [Neisseria lactamica ATCC 23970]
gi|296839299|gb|EFH23237.1| ribose 5-phosphate isomerase A [Neisseria polysaccharea ATCC 43768]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +FI I DE
Sbjct: 61 LARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|254252495|ref|ZP_04945813.1| Ribose 5-phosphate isomerase [Burkholderia dolosa AUO158]
gi|124895104|gb|EAY68984.1| Ribose 5-phosphate isomerase [Burkholderia dolosa AUO158]
Length = 292
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 63 MTQDELKRLVGQAAADYVIQHVPEGTVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 121
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + DV S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 122 TTERL-KSHGIKVFDLNDVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 180
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 181 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 235
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT G ++
Sbjct: 236 GNEIIDVKGLQITDPRGFEAKVNAWPGVVTVGLFAERGANLCLLGTETGVETII 289
>gi|219871236|ref|YP_002475611.1| ribose-5-phosphate isomerase A [Haemophilus parasuis SH0165]
gi|254808712|sp|B8F5R1|RPIA_HAEPS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|219691440|gb|ACL32663.1| ribose-5-phosphate isomerase A [Haemophilus parasuis SH0165]
Length = 219
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AAR A+QYV +G+G+GST F+ L + G + +S+ +E
Sbjct: 1 MDQLEMKKIAARAALQYVKPDTIVGVGSGSTVNCFIDALGEM--AGDIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S +V+ +D+ IDG DEI + +IKG G AL REKI++ A +FI I D
Sbjct: 59 RLRALGIEVFSANEVTELDVYIDGADEITPQGYMIKGGGAALTREKIVSSLAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 ASKQVDVLGSTFALPVEVIPMARSYVARQ----LVALGGSPEYR------ESVVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D + I +P + + NI GV+ +G+F + I+GT DG ++
Sbjct: 169 ILDVYNFKIFEPLKMEHTINNIAGVVTNGIFAQRYANVTIVGTPDGAKII 218
>gi|28198702|ref|NP_779016.1| ribose-5-phosphate isomerase A [Xylella fastidiosa Temecula1]
gi|32130001|sp|Q87D89|RPIA_XYLFT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|28056793|gb|AAO28665.1| ribose-5-phosphate isomerase A [Xylella fastidiosa Temecula1]
gi|307579837|gb|ADN63806.1| ribose-5-phosphate isomerase A [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 215
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV + M +G+GTGST F+ L + SS + K
Sbjct: 3 EAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGHTPKR--IKGAVSSSEQSTAHLKQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D RLIKG G +L REKIIA A+ +FI I D +K+
Sbjct: 61 HGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ + + R ++D GN I+D
Sbjct: 121 VATLGKFPLPIEVIPMARSLVARQIMARTD---GQPVWREG------VITDNGNVILDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D IIG+
Sbjct: 172 HLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSE 210
>gi|331017032|gb|EGH97088.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILSKLDDKSIVGVGTGSTANCFIDALAKH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS+++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSNLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVVPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + + I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEASINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|148232214|ref|NP_001090964.1| ribose-5-phosphate isomerase [Sus scrofa]
gi|158512830|sp|A2TLM1|RPIA_PIG RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=Phosphoriboisomerase
gi|124265188|gb|ABM98101.1| ribose 5-phosphate isomerase-like protein [Sus scrofa]
Length = 306
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 71 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLICIPTSFQ 130
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
H + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 131 ARQLILQHGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIV 190
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ + + FG ELR+ N +G V+
Sbjct: 191 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRTVTQ---KFGGVIELRMAVNKAGPVVT 247
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 248 DNGNFILDWKFDRVHKWSEVNTAITMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 304
>gi|260102739|ref|ZP_05752976.1| ribose 5-phosphate isomerase [Lactobacillus helveticus DSM 20075]
gi|260083456|gb|EEW67576.1| ribose 5-phosphate isomerase [Lactobacillus helveticus DSM 20075]
Length = 230
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 8/227 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
++K+ AA +A V GM LG+GTGST F+ L + N ++ +S ++
Sbjct: 6 QDRLKKEAAEKAASMVKSGMILGVGTGSTVAFFIDALGKRKDNDGLKLKAIVTTSNRSKK 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + DV VDL++DG D + L IKG GGAL EK +A + + I I D
Sbjct: 66 QLEGLGFKVSELADVDQVDLTVDGSDRVADNLDGIKGGGGALTLEKNVAINSKKIIWIVD 125
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG LP+E+ + K+ GL + R+ + +++ GNYI
Sbjct: 126 ESKLVHRLGGFPLPVEVLPISCEQNFKRFKQE----GLKPQWRM--DSDKRYITHYGNYI 179
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+D +P P ++ L + GV+EHGLF++M D II SDG
Sbjct: 180 IDLAADPVPAPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIE 226
>gi|332639021|ref|ZP_08417884.1| ribose-5-phosphate isomerase [Weissella cibaria KACC 11862]
Length = 232
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D ++K+ A RA ++V DGM +G+G+GST + L ++ G + +P+S T
Sbjct: 3 DTNELKKMAGYRAAEFVEDGMVVGIGSGSTIAYVIEALGKRVSEEGLNIIGVPTSDKTRR 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I +H+ +DV +DL+IDG DEID IKG G ALL EKI+A ++R I + D
Sbjct: 63 TAAKLGISMHNIDDVDHIDLTIDGADEIDPDFAAIKGGGAALLWEKIVAVNSTRNIWVVD 122
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K L LP+E+ +G ++ G RL +NG +D N++
Sbjct: 123 EGKLAPKL-THYLPVEVIPYGSDQLFKR----LDAKGYKPSWRLDQNG-NPVRTDSANFL 176
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+D I DP + EL ++ GV+EHGLF+N+VD ++G D + +
Sbjct: 177 IDLHPADITDPFTLGRELTSMVGVVEHGLFLNIVDTVVVGRQD-DVEIFD 225
>gi|330987223|gb|EGH85326.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 223
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS
Sbjct: 1 MNQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
G+ I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GHIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTTEGVKTL 221
>gi|124485182|ref|YP_001029798.1| ribose-5-phosphate isomerase [Methanocorpusculum labreanum Z]
gi|124362723|gb|ABN06531.1| ribose-5-phosphate isomerase [Methanocorpusculum labreanum Z]
Length = 222
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 120/226 (53%), Gaps = 9/226 (3%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
MDA + KRNA RA V DGM +G+GTGST M L ++IA G R+ +P+S T
Sbjct: 1 MDAVTEAKRNAGYRAADLVKDGMIVGLGTGSTVFFAMERLGERIASEGIRIFGVPTSNQT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + +D++IDG D++ ++IKG G A LREKI+A AA +F+V+
Sbjct: 61 AMRAEEYGIPLTTLSLHPVLDIAIDGADQVTPSKQMIKGRGAAHLREKIVADAAKQFVVV 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D +K V L +PIEI F + G +R G +SD GN
Sbjct: 121 IDSAKEVSVLDA-AVPIEILPFAYGSVCRK----LASLGGEPVMRNGVKKDGPVISDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDC--AIIGTS 222
YI D FG + DP + + IPGV+E+G+F M + I+G S
Sbjct: 176 YIFDCAFGKVDDPSGLESAINAIPGVLENGIFAKMTEKTLIIVGKS 221
>gi|164420783|ref|NP_001030510.2| ribose-5-phosphate isomerase [Bos taurus]
gi|296482492|gb|DAA24607.1| ribose-5-phosphate isomerase [Bos taurus]
Length = 306
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ ++ IP+S
Sbjct: 71 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVEQENLKLVCIPTSFQ 130
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 131 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIV 190
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ + + FG ELR+ N +G V+
Sbjct: 191 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRTVTQ---KFGGVIELRMAVNKAGPVVT 247
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 248 DNGNFILDWKFDRVHKWSEVNIAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 304
>gi|113868320|ref|YP_726809.1| ribose-5-phosphate isomerase A [Ralstonia eutropha H16]
gi|123133859|sp|Q0K980|RPIA_RALEH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|113527096|emb|CAJ93441.1| Ribose 5-phosphate isomerase [Ralstonia eutropha H16]
Length = 228
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A F V S
Sbjct: 1 MTQDELKALVAQAAADYVKQEVPEGAVLGVGTGSTANLFIDAVAA-FKERFAGAVSSSEA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+T + H + +V + + +DG DEID+ +IKG GGAL REKI+A A RF+
Sbjct: 60 STRRL-QQHGFKVLDLNEVDEIPVYVDGADEIDASGAMIKGGGGALTREKIVASVAKRFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V +G LP+E+ G LR+ + G G++ +D
Sbjct: 119 CIADGSKLVQTMGTFPLPVEVIPMARAAVARK----LQALGGQPRLRMTKEG-GIYKTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
GN I+D I DP+ + + +PGV+ GLF + D ++GT DG
Sbjct: 174 GNVILDVAGLKIDDPRGLEQAVNQVPGVVTVGLFALRGADVLLLGTGDGVQRT 226
>gi|323495987|ref|ZP_08101051.1| ribose-5-phosphate isomerase A [Vibrio sinaloensis DSM 21326]
gi|323318949|gb|EGA71896.1| ribose-5-phosphate isomerase A [Vibrio sinaloensis DSM 21326]
Length = 218
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKEAGWAALKYVEKGSIVGVGTGSTVNHFIDALG-TIKDDIKGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V+ +D+ +DG DEI++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 LKGL-GIEVFDSNEVALLDVYVDGADEINASREMIKGGGAALTREKIVAAIADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 DTKAVDVLGAFPLPVEVIPMARSYVARE----LVKLGGDPAYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I +P+ + ++ I GV+ GLF + D I GT +G +
Sbjct: 169 LDVHNMEITNPKQLEDKINAIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|66048071|ref|YP_237912.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. syringae
B728a]
gi|75500178|sp|Q4ZLU8|RPIA_PSEU2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|63258778|gb|AAY39874.1| Ribose 5-phosphate isomerase [Pseudomonas syringae pv. syringae
B728a]
Length = 223
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS+
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A+ FI
Sbjct: 59 ATAARLKAHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVANTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|328461982|gb|EGF34174.1| ribose-5-phosphate isomerase A [Lactobacillus helveticus MTCC 5463]
Length = 230
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 8/227 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
++K+ AA +A V GM LG+GTGST F+ L + N ++ +S ++
Sbjct: 6 QDRLKKEAAEKAASMVKSGMILGVGTGSTVAFFIDALGKRKDNDGLKLKAIVTTSNRSKK 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + DV VDL++DG D + L IKG GGAL EK +A + + I I D
Sbjct: 66 QLEGLGFKVSELADVDQVDLTVDGSDRVADNLDGIKGGGGALTLEKNVAINSKKIIWIVD 125
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG LP+E+ + K+ GL + R+ + +++ GNYI
Sbjct: 126 ESKLVHRLGGFPLPVEVLPISCEQNFKRFKQE----GLKPQWRM--DSDKRYITHYGNYI 179
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+D +P P ++ L + GV+EHGLF++M D II SDG
Sbjct: 180 IDLAADPVPVPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIE 226
>gi|307127623|ref|YP_003879654.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae 670-6B]
gi|306484685|gb|ADM91554.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae 670-6B]
gi|332076106|gb|EGI86572.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae GA41301]
gi|332077240|gb|EGI87702.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae GA17545]
Length = 227
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ I +S T
Sbjct: 2 ENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAITTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRHFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P EL ++ GV+EHGLF MVD I+ DG + K
Sbjct: 176 LALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSK 224
>gi|71897970|ref|ZP_00680175.1| Ribose 5-phosphate isomerase [Xylella fastidiosa Ann-1]
gi|71732214|gb|EAO34269.1| Ribose 5-phosphate isomerase [Xylella fastidiosa Ann-1]
Length = 215
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV + M +G+GTGST F+ L + SS + K
Sbjct: 3 EAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGHTPKR--IKGAVSSSEQSTAHLKQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D RLIKG G +L REKIIA A+ +FI I D +K+
Sbjct: 61 HGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ + + + R ++D GN I+D
Sbjct: 121 VATLGKFPLPIEVIPMARSLVARQIMTLTD---GQPVWREG------VITDNGNVILDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D IIG+
Sbjct: 172 HLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSE 210
>gi|289662137|ref|ZP_06483718.1| ribose-5-phosphate isomerase A [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 204
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/213 (35%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI YV DGM +G+GTGST F+ L +I + + V S ++T +
Sbjct: 3 EAKRLAAEKAIDYVEDGMIVGVGTGSTVAYFIDALG-RIGHRIKGAVSSSEQSTARL-RQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D LIKG G AL REKIIA A+ RFI I D SK+
Sbjct: 61 HGIEVLDLNHTGNLSLYVDGADECDPNRCLIKGGGAALTREKIIAEASERFICIVDPSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LP+E+ + + + G R V+D GN ++D
Sbjct: 121 VPVLGKFPLPVEVIPMARSLVARQI---LALTGGQPVWRDG------VVTDNGNVVLDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCA 217
I DP + L IPGV+ GLF
Sbjct: 172 NLQITDPVALERSLNQIPGVVCVGLFARRPADV 204
>gi|84390085|ref|ZP_00991347.1| ribose-5-phosphate isomerase A [Vibrio splendidus 12B01]
gi|84376739|gb|EAP93614.1| ribose-5-phosphate isomerase A [Vibrio splendidus 12B01]
Length = 218
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV +G +G+GTGST F+ L + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALQYVEEGSIVGVGTGSTVNHFIDALG-TMKEKIKGAVSSSVASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV +D+ +DG DEI++ +IKG G AL REKI+A + +FI I D
Sbjct: 60 LEAL-EIKVFECNDVFKLDIYVDGADEINASRDMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R +D GN I
Sbjct: 119 GTKAVDVLGKFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------CTTDNGNMI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + + I GV+ GLF + D I GT +G +
Sbjct: 169 LDVYGMAIENPKQLEDIINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|319788230|ref|YP_004147705.1| ribose 5-phosphate isomerase [Pseudoxanthomonas suwonensis 11-1]
gi|317466742|gb|ADV28474.1| ribose 5-phosphate isomerase [Pseudoxanthomonas suwonensis 11-1]
Length = 215
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A +AI YV DGM +G+GTGST F+ L G + SS + K
Sbjct: 3 EAKRLAGEKAIDYVEDGMIVGVGTGSTVAYFIEALGR--IKGRIAGAVSSSEQSTKRLKE 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
I + + L +DG DE D RLIKG G AL REKIIA A+ F+ I D +K+
Sbjct: 61 LGIEVLDANAAGPLKLYVDGADECDPHKRLIKGGGAALTREKIIAEASETFVCIIDPAKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LGR LP+E+ + + + G R V+D GN+I+D
Sbjct: 121 VPVLGRFPLPVEVIPMARSLVARRI---LALTGGQPVWRDG------VVTDNGNWILDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D I+G
Sbjct: 172 NLSITDPVAMETELNQIPGVVSVGLFARRPADIVIVGGE 210
>gi|295426467|ref|ZP_06819117.1| ribose 5-phosphate isomerase A [Lactobacillus amylolyticus DSM
11664]
gi|295063835|gb|EFG54793.1| ribose 5-phosphate isomerase A [Lactobacillus amylolyticus DSM
11664]
Length = 231
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 10/232 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSS 55
MD Q+K+ AA +A + V G LG+GTGST F+ L + GF ++ ++ +S
Sbjct: 1 MDKKQQDQLKKEAATKAAEIVKPGSVLGVGTGSTVAFFIDALGQRKEKEGFTLKHIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + D+ VDL++DG D + L IKG GGAL EK +A + +
Sbjct: 61 NRSKKQLEGLGFKVDELADIDQVDLTVDGADRVADNLDGIKGGGGALTLEKNVAINSKKI 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I DESK V LG LP+E+ + ++ GL + R NG +V+
Sbjct: 121 IWIVDESKLVHRLGGFPLPVEVLPISCEQNFRKFEQE----GLKPQWRKDENGK-RYVTH 175
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GNYI+D +P P ++ L + GV+EHGLF++M D II SDG
Sbjct: 176 YGNYIIDLAADPVPAPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGSIE 227
>gi|254431681|ref|ZP_05045384.1| ribose 5-phosphate isomerase A [Cyanobium sp. PCC 7001]
gi|197626134|gb|EDY38693.1| ribose 5-phosphate isomerase A [Cyanobium sp. PCC 7001]
Length = 237
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 122/222 (54%), Gaps = 8/222 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
+MK+ A A + + GM +G+G+GSTA + L ++ +G + + +S E
Sbjct: 5 QDRMKQAVALAATEQIQSGMVVGLGSGSTAALMIQALGARLRSGALTDITGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S +S +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELGIPLKSLNAISRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVARRADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ ++ G +LR+ +G V+D GN
Sbjct: 125 ATKLVDTLNLGFLLPVEVLPGAW----RQVQADLEALGGEAQLRMAVRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
++DA F G I DP + ++ N+PGV+E+GLF+N+ D ++G
Sbjct: 181 VLDARFAGGITDPVALEQQINNLPGVLENGLFVNLTDQVLVG 222
>gi|213693044|ref|YP_002323630.1| ribose 5-phosphate isomerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|254808701|sp|B7GN96|RPIA_BIFLI RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|213524505|gb|ACJ53252.1| ribose 5-phosphate isomerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320459222|dbj|BAJ69843.1| ribose-5-phosphate isomerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 232
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSR 56
MD +K+ A A + V +GM G+GTGST K + L + G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLVENGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQAQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + G LRL +G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGHVIKKFE----ACGYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 176 NNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
>gi|77747578|ref|NP_299297.2| ribose-5-phosphate isomerase A [Xylella fastidiosa 9a5c]
gi|30173389|sp|Q9PBX0|RPIA_XYLFA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
Length = 215
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR AA +AI+YV + M +G+GTGST F+ L + SS + K
Sbjct: 3 EAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGRTPKR--IKGAVSSSEQSTAHLKQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H I + ++ L +DG DE D RLIKG G +L REKIIA A+ +FI I D +K+
Sbjct: 61 HGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ + + R ++D GN I+D
Sbjct: 121 VATLGKLPLPIEVIPMARSLVARQIMARTD---GQPVWREG------VITDNGNVILDVH 171
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTS 222
I DP + EL IPGV+ GLF D IIG+
Sbjct: 172 HLRITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSE 210
>gi|330940603|gb|EGH43647.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. pisi str.
1704B]
gi|330954756|gb|EGH55016.1| ribose-5-phosphate isomerase A [Pseudomonas syringae Cit 7]
Length = 223
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS+
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKAHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTTEGVKTL 221
>gi|257888027|ref|ZP_05667680.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,141,733]
gi|257893168|ref|ZP_05672821.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,408]
gi|257896354|ref|ZP_05676007.1| ribose-5-phosphate isomerase A [Enterococcus faecium Com12]
gi|257899328|ref|ZP_05678981.1| ribose-5-phosphate isomerase A [Enterococcus faecium Com15]
gi|293379440|ref|ZP_06625584.1| ribose 5-phosphate isomerase A [Enterococcus faecium PC4.1]
gi|293556595|ref|ZP_06675163.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1039]
gi|257824081|gb|EEV51013.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,141,733]
gi|257829547|gb|EEV56154.1| ribose-5-phosphate isomerase A [Enterococcus faecium 1,231,408]
gi|257832919|gb|EEV59340.1| ribose-5-phosphate isomerase A [Enterococcus faecium Com12]
gi|257837240|gb|EEV62314.1| ribose-5-phosphate isomerase A [Enterococcus faecium Com15]
gi|291601271|gb|EFF31555.1| ribose 5-phosphate isomerase A [Enterococcus faecium E1039]
gi|292641963|gb|EFF60129.1| ribose 5-phosphate isomerase A [Enterococcus faecium PC4.1]
Length = 227
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ +K+ A A ++V DGM +G+GTGSTA + + ++ G R+ + +S T+
Sbjct: 1 MNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VDL+IDG DEI + + IKG G ALL EKI+A + I I D S
Sbjct: 61 EKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSS 120
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG+ LP+E+ +G + L E L + + +DGG+YI+D
Sbjct: 121 KLVHKLGKFPLPVEVIPYGSQQLLHIFDEKGFQPVLRTD-----ENGEVLTTDGGHYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I P+ ++ L + GV+EHGLF+NMV ++G+ G +L
Sbjct: 176 LHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKG-VEILD 222
>gi|121594480|ref|YP_986376.1| ribose-5-phosphate isomerase A [Acidovorax sp. JS42]
gi|120606560|gb|ABM42300.1| ribose-5-phosphate isomerase [Acidovorax sp. JS42]
Length = 229
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 112/228 (49%), Gaps = 9/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A+QYVV G +G+GTGST +F+ LA I + R V S +T
Sbjct: 8 SQDELKTLVGQAALQYVVPGELVGVGTGSTVNKFIDALA-SIKDSIRGAVSSSEASTARL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ DV S+ + IDG DEID ++KG G AL REKI+A A RF+ I DE
Sbjct: 67 KAL-GIPVLDANDVRSLSVYIDGADEIDGNGYMVKGGGAALTREKIVAALARRFVCIADE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V+ LG LP+E+ + L + LR V+D G +I+
Sbjct: 126 SKLVNVLGAFPLPVEVIPMAAAYIARRFES------LGGQATLRLKDGQPLVTDNGQHIL 179
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
D I DP E+ PGV+ G+F + + ++GT+ G +
Sbjct: 180 DVRGLTISDPLAFETEVNQWPGVVTVGVFALQKANVCLLGTAQGVRTL 227
>gi|320546579|ref|ZP_08040894.1| ribose 5-phosphate isomerase [Streptococcus equinus ATCC 9812]
gi|320448964|gb|EFW89692.1| ribose 5-phosphate isomerase [Streptococcus equinus ATCC 9812]
Length = 224
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A QYV DGM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EKLKKMAGVTAAQYVKDGMVVGLGTGSTAYFFVEEIGRRMKEEGLKVVGVTTSSQTTAQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +D+ +D+++DG DE+D IKG GGALL EKI+A + +I + DES
Sbjct: 62 EGLGIPLKAVDDIDVIDVTVDGADEVDKNFNGIKGGGGALLMEKIVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ ++ + R FV+D NYI+D
Sbjct: 122 KMVDKLGAFKLPVEVVQYGADRIFREFEKKGY------KPSYRMADGERFVTDMKNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P EL + GV+EHGLF MV+ I+ DG ++ K
Sbjct: 176 LDLGVIENPVEFGKELKAMVGVVEHGLFNGMVNKVIVAGKDGVKILEAK 224
>gi|294495523|ref|YP_003542016.1| ribose-5-phosphate isomerase [Methanohalophilus mahii DSM 5219]
gi|292666522|gb|ADE36371.1| ribose-5-phosphate isomerase [Methanohalophilus mahii DSM 5219]
Length = 230
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 6/224 (2%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A R A + V DG +G+GTGST + L +K+ G ++ + +S +E
Sbjct: 13 KEAAGRAAAELVKDGSIVGLGTGSTTAYAIKALGEKVKKGLDIRAVVTSYQSEMLAIQAG 72
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IPL S + +D++IDG DE+DS L ++KG GGA REK+++ +A++FIV+ D+SK D
Sbjct: 73 IPLTSLAENPVLDIAIDGADEVDSNLNVVKGGGGAHFREKVVSLSANKFIVVVDDSKISD 132
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
+ +P+E+ ++ + G +R G +SD GN+I+DA FG
Sbjct: 133 TI-SMAIPLEVLPCARELV----QQQVAQMGGKASIRPASRKDGPVISDNGNFIMDAAFG 187
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
IP+PQ + +L N+ G++EHG+F N D IG DG+ + +
Sbjct: 188 EIPNPQEFADKLSNVVGIVEHGIFTN-TDKVYIGYKDGKIELRE 230
>gi|289626075|ref|ZP_06459029.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289651103|ref|ZP_06482446.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330868965|gb|EGH03674.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 223
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + L E G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQLVE----LGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTTEGVKTL 221
>gi|329889472|ref|ZP_08267815.1| ribose 5-phosphate isomerase A [Brevundimonas diminuta ATCC 11568]
gi|328844773|gb|EGF94337.1| ribose 5-phosphate isomerase A [Brevundimonas diminuta ATCC 11568]
Length = 227
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 92/224 (41%), Positives = 133/224 (59%), Gaps = 3/224 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M LQ K+NA A YV GM +G+GTGSTA F+ LA + N ++ +P+S T +
Sbjct: 1 MSDLQ-KKNAGEAAAAYVEGGMVVGLGTGSTAAWFVKALAAR--NLPDLRCVPTSERTAD 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + ED +DL++DG DEI L LIKG G ALLREK++ A++R I I D
Sbjct: 58 LARELGLTLSTLEDTPKIDLTVDGADEIGPGLALIKGGGAALLREKLVWEASARCICIAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V LG LPIE+ FG T + + +V + + R+R GL +DGGN I
Sbjct: 118 AAKVVPALGTFPLPIEVVAFGHKTTANRIADVLADHDIASPARVREAERGLIRTDGGNLI 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
DA I DP ++ +L ++ GV+EHGLF+++ D A+IGT++G
Sbjct: 178 YDAACKLIADPARLAADLKSLTGVVEHGLFLDLTDLAVIGTNEG 221
>gi|148244380|ref|YP_001219074.1| ribose-5-phosphate isomerase A [Candidatus Vesicomyosocius okutanii
HA]
gi|166229254|sp|A5CXI2|RPIA_VESOH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|146326207|dbj|BAF61350.1| ribose 5-phosphate isomerase [Candidatus Vesicomyosocius okutanii
HA]
Length = 220
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 12/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK A+ A++YV+ +G+GTGSTA F+ L+ I N + + SS+ T
Sbjct: 1 MTQDEMKFTVAQTALKYVIKNTIIGVGTGSTANFFIDALS-TIKNNIK-GAVASSKATAQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + V+++ IDG DE D+ L LIKG GGAL REKI+A A +FI I D
Sbjct: 59 RLENHGIRVFDLNKVTAISTYIDGADESDNNLNLIKGGGGALTREKIVAAVAHQFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V +G LPIE+ N + + + G E+R F++D GN+I
Sbjct: 119 ESKLVSIMGSFPLPIEVIPMAANYVKNQISQ---KIGGIPEVRKD------FITDNGNFI 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I +P+ + +L +I GV+ +GLF N + ++GT +G ++
Sbjct: 170 LDIKDLKITNPKAMETKLNSIIGVVTNGLFANRGANVLLLGTPNGVKIITN 220
>gi|301624377|ref|XP_002941481.1| PREDICTED: ribose-5-phosphate isomerase isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 235
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 9/236 (3%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M + KR A A+ +V + LG+G+GST + LA+++ + +P+S
Sbjct: 1 MT-EEAKRLAGWAAVDNHVKNNQALGIGSGSTIVHAVNRLAERVKQENLNIVCVPTSFQA 59
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + L + +D++IDG DE+DS L LIKG GG L +EKI+A A FIVI
Sbjct: 60 RQLILQNGLVLSDLDRHPELDVAIDGADEVDSELNLIKGGGGCLAQEKIVAGCAKSFIVI 119
Query: 119 GDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D K + +PIE+ + AL+ FG ELR+ + +G V+D
Sbjct: 120 ADYRKDSKNFGEQWKKGVPIEVIPMAYVPVIKALQSR---FGGVAELRMAVSKAGPVVTD 176
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN+++D F + + + ++ E+ IPGV++ GLFINM + G DG + K
Sbjct: 177 NGNFLLDWKFDKVHEWKAVNTEIKMIPGVVDTGLFINMAERVYFGMEDGTVKIRDK 232
>gi|332360299|gb|EGJ38112.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK355]
Length = 225
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EELGIPLKSIDEVDFVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + E++ R FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGYKPAFREKVDQR------FVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|237802248|ref|ZP_04590709.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025105|gb|EGI05161.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 223
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
GN I+D I +P + + I GV+ +GLF D ++GT +G L++
Sbjct: 169 GNIIIDVHNMSITNPVELEASINAIVGVVTNGLFAARPADLLLLGTDEG-VKTLKR 223
>gi|296454828|ref|YP_003661972.1| ribose 5-phosphate isomerase [Bifidobacterium longum subsp. longum
JDM301]
gi|296184260|gb|ADH01142.1| ribose 5-phosphate isomerase [Bifidobacterium longum subsp. longum
JDM301]
Length = 232
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSR 56
MD +K+ A A + V +GM G+GTGST K + L + G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLVENGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQVQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + ++ G LRL +G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGHVIKKFEDR----GYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 176 NNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
>gi|225435215|ref|XP_002282058.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 341
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A++YV GM LG+GTGSTAK + + + + G + IP+S+ T
Sbjct: 37 TQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKMTH 96
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + +DL+IDG DE+D L L+KG GG+LLREK++ A +F+VI
Sbjct: 97 EQAVSLGIPLSDLDSYPILDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVVIV 156
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V++LG +P+EI F T L+ + G +LR +NG FV+D
Sbjct: 157 DESKLVNYLGGSGLAMPVEIVPFCWKFTAQRLQMLFEESGCVAKLRTYQNGE-PFVTDNM 215
Query: 178 NYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYIVD +F I D ++ S + + GV+EHG+FI+M I+ G +
Sbjct: 216 NYIVDLYFKREIGDLKVASDAILRLAGVVEHGMFIDMATTLIVAGECGVIV 266
>gi|289191654|ref|YP_003457595.1| ribose 5-phosphate isomerase [Methanocaldococcus sp. FS406-22]
gi|288938104|gb|ADC68859.1| ribose 5-phosphate isomerase [Methanocaldococcus sp. FS406-22]
Length = 226
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M +K A+ A++ V DGM +G+GTGSTA F+ L ++I V IP+S +
Sbjct: 1 MSNEDLKLKVAKEAVKLVKDGMVVGLGTGSTAALFIRELGNRIKEEELTVFGIPTSFEAK 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IPL + ++ VD++ DG DE+ + L LIKG GG +EKI+ + A F+V+
Sbjct: 61 MLAMQYEIPLVTLDEYD-VDIAFDGADEVEEKTLFLIKGGGGCHTQEKIVDYNADEFVVL 119
Query: 119 GDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V + +P+E+ + A S G +RL G ++D G
Sbjct: 120 VDESKLVKKLGEKFPIPVEVIPSAYRVVMRA----LSNMGGEAVIRLGDRKRGPVITDNG 175
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N I+D F I D + E+ NIPGV+E+G+F VD ++GT G L+K
Sbjct: 176 NMIIDV-FMNIDDAIELEKEINNIPGVVENGIFT-RVDKVLVGTKKG-VKTLKK 226
>gi|111019890|ref|YP_702862.1| ribose-5-phosphate isomerase [Rhodococcus jostii RHA1]
gi|110819420|gb|ABG94704.1| ribose-5-phosphate isomerase [Rhodococcus jostii RHA1]
Length = 252
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 3/231 (1%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
K R A++ Y DG LG+G+G+T+ F+ L +K+A+G V +P+S T +
Sbjct: 8 QDAAKYAVGRAAVERYAHDGAQLGLGSGTTSAWFVRALGEKVADGLDVVGVPTSTATRDL 67
Query: 62 CKIHHIPLHSPEDVSS-VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I L D+ +D+++DG DE+D +IKG G LL E+++A A+S+ + I D
Sbjct: 68 ALSVGITLVDLNDLDRPLDVTLDGPDEVDHDGDMIKGGGACLLWERMVAEASSKMVCIAD 127
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGL-NEELRLRRNGSGLFVSDGGNY 179
++K V+ LG LPIE+ FG T ++ + + G + ++ R V+D GN+
Sbjct: 128 DTKLVEQLGSFPLPIEVIPFGWKATRRSISALLTDLGYTDVKIIQRHRNGQPVVTDSGNF 187
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+DA I D ++ L I GV+E+GLF + +I + DG +++
Sbjct: 188 ILDAHMVAITDKALLDTNLNWIAGVVENGLFTGIAHEILIASPDGAAKLIE 238
>gi|167855373|ref|ZP_02478140.1| ribose-5-phosphate isomerase A [Haemophilus parasuis 29755]
gi|167853521|gb|EDS24768.1| ribose-5-phosphate isomerase A [Haemophilus parasuis 29755]
Length = 219
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AAR A+QYV +G+G+GST F+ L + +A+ + V S + E
Sbjct: 1 MDQLEMKKIAARAALQYVKPDTIVGVGSGSTVNCFIDALGE-MADKIKGAVAASKASEER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S +V+ +D+ IDG DEI + +IKG G AL REKI++ A +FI I D
Sbjct: 60 LRAL-GIEVFSANEVTELDVYIDGADEITPQGYMIKGGGAALTREKIVSSLAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 ASKQVDVLGSTFALPVEVIPMARSYVARQ----LVALGGSPEYR------ESVVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D + I +P + + NI GV+ +G+F + I+GT DG ++
Sbjct: 169 ILDVYNFKIFEPLKMEHTINNIAGVVTNGIFAQRYANVTIVGTPDGAKII 218
>gi|71736665|ref|YP_276972.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298489279|ref|ZP_07007295.1| Ribose 5-phosphate isomerase A [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|123634727|sp|Q48CC1|RPIA_PSE14 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|71557218|gb|AAZ36429.1| ribose 5-phosphate isomerase A [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298156178|gb|EFH97282.1| Ribose 5-phosphate isomerase A [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320326273|gb|EFW82326.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331727|gb|EFW87665.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872489|gb|EGH06638.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 223
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTTEGVKTL 221
>gi|302803035|ref|XP_002983271.1| hypothetical protein SELMODRAFT_117990 [Selaginella moellendorffii]
gi|300148956|gb|EFJ15613.1| hypothetical protein SELMODRAFT_117990 [Selaginella moellendorffii]
Length = 240
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 132/229 (57%), Gaps = 7/229 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
++K AA +AI+YV GM LG+GTGSTA + L + + +G + +P+S+ T
Sbjct: 9 TQDELKAMAADKAIEYVESGMVLGLGTGSTAAFVVAKLGELMKSGKLKNIVGVPTSKRTA 68
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+S+F+V+
Sbjct: 69 EQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASSKFVVVV 128
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K VD LG +P+E+ QF LK + G E +LR +G +V+D
Sbjct: 129 DETKLVDGLGGSGLAMPVEVVQFCWKYNAERLKTLPEVAGC--EAKLRLDGDKPYVTDNS 186
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
NYIVD +F I D + + + ++ GV++HGLF++M II + G
Sbjct: 187 NYIVDLYFKTPIKDARAAAKAISSLEGVVDHGLFLDMATAVIIAGTSGV 235
>gi|224130670|ref|XP_002328347.1| predicted protein [Populus trichocarpa]
gi|222838062|gb|EEE76427.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 132/235 (56%), Gaps = 7/235 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A++YV GM LG+GTGSTA + L + + G + +P+S+ TE
Sbjct: 58 TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGELLKTGELKDIIGVPTSKRTE 117
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ +IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+ F+V+
Sbjct: 118 EQARSLNIPLSVLDDHPHIDLAIDGADEVDPLLNLVKGRGGALLREKMVEAASDEFVVVA 177
Query: 120 DESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D++K VD + +P+E+ QF L L+E+ G+ +LR +G +V+D
Sbjct: 178 DDTKVVDGLGGSKLAMPVEVVQFCWKYNLLRLQEMFKDEGVEAKLRAGEDGK-PYVTDNF 236
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F I D E+ + GV+EHGLF++M II G V K
Sbjct: 237 NYIVDLYFENPIKDGYAAGKEISGLEGVVEHGLFLDMATAVIIAGKTG-VEVKSK 290
>gi|68249066|ref|YP_248178.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 86-028NP]
gi|81336529|sp|Q4QN79|RPIA_HAEI8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|68057265|gb|AAX87518.1| ribose 5-phosphate isomerase A [Haemophilus influenzae 86-028NP]
Length = 219
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 122/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A++YV +G+G+GST F+ L I N + V+ +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALEYVTADTIVGVGSGSTVNCFIEALG-TIKNKIQ-GVVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LVALGGAPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKII 218
>gi|88706368|ref|ZP_01104073.1| Ribose-5-phosphate isomerase A [Congregibacter litoralis KT71]
gi|88699304|gb|EAQ96418.1| Ribose-5-phosphate isomerase A [Congregibacter litoralis KT71]
Length = 230
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 113/234 (48%), Gaps = 17/234 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
MD +K AR A+ V G LG+GTGSTA F+ LL + + SS
Sbjct: 1 MDQDSLKLKVARAALDIVQPGLESGTVLGIGTGSTANMFIDLLGE--VAHLFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H+IP++ V + + +DG DE + L+LIKG G AL REKI+A A FI
Sbjct: 59 ASAERLKSHNIPVYDLNAVDRISVYVDGADECNEALQLIKGGGAALTREKIVAAVAKEFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V LG LP+E+ + + + G + LR V+D
Sbjct: 119 CIADESKWVPVLGAFPLPVEVIPMARSHVAREIVK----LGGDPILREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
GN I+D + I P + + I GV+ +GLF + D ++GT+DG +
Sbjct: 169 GNVILDVYNFSIAQPLAMEARINGIVGVVCNGLFALRPADRLLLGTADGVRDLR 222
>gi|312963702|ref|ZP_07778173.1| 50S ribosomal protein L1 [Pseudomonas fluorescens WH6]
gi|311281737|gb|EFQ60347.1| 50S ribosomal protein L1 [Pseudomonas fluorescens WH6]
Length = 223
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ + D +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDQLKQAVAQAAVDLILPKLDDKSIVGVGTGSTANCFIDALARH--KGAFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D+ L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDAHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPVLGAFPLPVEVIPMARSHVARE----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D F I +P + ++ I GV+ +GLF D ++GT +G +
Sbjct: 169 GNIILDVFNMQITNPVELETQINAIVGVVTNGLFAARPADVLLLGTCEGVKTL 221
>gi|121635182|ref|YP_975427.1| ribose-5-phosphate isomerase A [Neisseria meningitidis FAM18]
gi|304387084|ref|ZP_07369335.1| ribose 5-phosphate isomerase A [Neisseria meningitidis ATCC 13091]
gi|166200056|sp|A1KUU8|RPIA_NEIMF RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|120866888|emb|CAM10647.1| ribose 5-phosphate isomerase A [Neisseria meningitidis FAM18]
gi|304338833|gb|EFM04936.1| ribose 5-phosphate isomerase A [Neisseria meningitidis ATCC 13091]
gi|325134672|gb|EGC57312.1| ribose 5-phosphate isomerase A [Neisseria meningitidis M13399]
gi|325142708|gb|EGC65088.1| ribose 5-phosphate isomerase A [Neisseria meningitidis 961-5945]
gi|325198633|gb|ADY94089.1| ribose 5-phosphate isomerase A [Neisseria meningitidis G2136]
Length = 223
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 119/228 (52%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P ++ E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDKPLMMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|332638833|ref|ZP_08417696.1| ribose 5-phosphate isomerase A [Weissella cibaria KACC 11862]
Length = 228
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 86/233 (36%), Positives = 125/233 (53%), Gaps = 9/233 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNT 58
MD + KR A A + DGM +G+GTGST K F+ LA +I G + + +SR T
Sbjct: 1 MDKQTEQKRAAGEYAASLIEDGMVVGLGTGSTVKFFIERLAARINQEGLDIVGVTTSRQT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ K I L S ++V +D++IDG DE+D L IKG G ALL EKI+A +SR + I
Sbjct: 61 SSLAKGWGIKLKSVDEVPGIDITIDGADEVDVALNGIKGGGAALLFEKIVALNSSRNVWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK LG LP+E+ +G ++ L + L+ + R R +D GN
Sbjct: 121 IDESKYHPKLGTFPLPVEVVPYGSHQLLKRFADA----DLHPQFR-RNADGLRLTTDAGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YI+D I PQ ++ L GV+EHGLF+ + D IIG + ++++
Sbjct: 176 YIIDLQLTEITHPQALAYYLEQTIGVVEHGLFLQVADAVIIGGDE--ITIIER 226
>gi|330899110|gb|EGH30529.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 223
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA + SS+
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKH--KTAFDGAVASSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAVRLKAHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTAEGVKTL 221
>gi|114778168|ref|ZP_01453055.1| ribose 5-phosphate isomerase [Mariprofundus ferrooxydans PV-1]
gi|114551586|gb|EAU54140.1| ribose 5-phosphate isomerase [Mariprofundus ferrooxydans PV-1]
Length = 222
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+ YV G +G+GTGSTA F+ LA G + + SS T
Sbjct: 1 MTQDEMKQKVAEAALAYVKPGTIVGVGTGSTANMFIDALASM--KGDIIGAVASSEATAA 58
Query: 61 FCKIHHIPLHSPED----VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
H I + + V+S+ + IDG DE D+ L KG GGAL REKI+A A+ FI
Sbjct: 59 RLAGHGITVLDLNEALTQVASLSVYIDGADEFDAGKNLTKGGGGALTREKIVAAASDAFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESKRVD LG LPIE+ ++ G N LR F++D
Sbjct: 119 CIVDESKRVDCLGAFPLPIEVIPMARELVAGIARK----LGGNPVLRDG------FITDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I D + + EL ++PGV+ +G+F + D ++GT G +
Sbjct: 169 GNLIIDVHGLKITDARALEDELNSVPGVVTNGIFSHQGADVVLMGTPAGVETIR 222
>gi|257483782|ref|ZP_05637823.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331012067|gb|EGH92123.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 223
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ ++ D +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDQLKQAVAQAAVDFILPKLDDKSIVGVGTGSTANCFIDALAKHKA--AFDGTVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D L LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYELNTVSDLEFYVDGADESDEHLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADGSKLVPVLGAFPLPVEVIPMARSHVARQ----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P + ++ I GV+ +GLF D ++GT++G +
Sbjct: 169 GNIIIDVHNMSITNPVELEAQINAIVGVVTNGLFAARPADLLLLGTTEGVKTL 221
>gi|302382680|ref|YP_003818503.1| ribose 5-phosphate isomerase [Brevundimonas subvibrioides ATCC
15264]
gi|302193308|gb|ADL00880.1| ribose 5-phosphate isomerase [Brevundimonas subvibrioides ATCC
15264]
Length = 227
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 97/229 (42%), Positives = 132/229 (57%), Gaps = 4/229 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M Q K+ A A V GM +G+GTGSTA F+ LA + G R +P+S T +
Sbjct: 1 MSDHQ-KQIAGEAAALRVEAGMVVGLGTGSTAGWFVKALAARSLTGLR--CVPTSEKTAD 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +PL + EDVS +DL++DG DE+ L LIKG G ALLREK++ A+ R IVI D
Sbjct: 58 LARELGLPLTTLEDVSRIDLTVDGADEVGPGLALIKGGGAALLREKLVWEASDRCIVIAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V LG LPIE+ FG T + + +V + + RLR+ G+ +DGGN I
Sbjct: 118 AAKVVPVLGAFPLPIEVVAFGHKATANRIMDVLTDHDITMPARLRQADRGVVRTDGGNVI 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
DA I DP ++ +L I GV+EHGLF+++ D AIIG DG VL
Sbjct: 178 YDAKCVAIHDPVRLADDLKLITGVVEHGLFLDLADEAIIGRDDG-VEVL 225
>gi|58613535|gb|AAW79354.1| chloroplast ribose-5-phosphate isomerase [Heterocapsa triquetra]
Length = 323
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 83/234 (35%), Positives = 119/234 (50%), Gaps = 11/234 (4%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
++K+ +A+ YV G +G+GTGSTA + + + +G + IP+S T
Sbjct: 84 TQDELKKQVGYKAVDDYVKSGTVIGLGTGSTAAFAVERVGQLLKSGELKDIIAIPTSIRT 143
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + + S +D++IDG DE+D L L+KG GGAL REKI+ A +FIVI
Sbjct: 144 KEQAESLGIPLATLDTHSDLDVAIDGADEVDPNLNLVKGGGGALFREKIVEMCAKKFIVI 203
Query: 119 GDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR------RNGSGL 171
DESK +P+EI F T+ + ++ + G LRL +G
Sbjct: 204 VDESKMCGGLGPGFPIPVEIVPFCHEHTMREIAKLPALAGCKPVLRLGDVANNKPDGDKP 263
Query: 172 FVSDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
V+D NYIVD F I D +L N GV++HGLF M II SDG
Sbjct: 264 AVTDNSNYIVDLVFETPIKDAVAAGEQLKNTVGVVDHGLFTGMTTACIIAGSDG 317
>gi|241895298|ref|ZP_04782594.1| ribose-5-phosphate isomerase [Weissella paramesenteroides ATCC
33313]
gi|241871604|gb|EER75355.1| ribose-5-phosphate isomerase [Weissella paramesenteroides ATCC
33313]
Length = 233
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 84/230 (36%), Positives = 128/230 (55%), Gaps = 7/230 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
D +K+ A RA ++V DGM +G+G+GST + L ++A G +++ IP+S T
Sbjct: 3 DQTALKKLAGYRAAEFVEDGMVVGIGSGSTIAFVVEALGKRVAEEGLQIKGIPTSDKTRR 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IP+H+ +DV +DL+IDG D+ID IKG G ALL EKI+A + R I + D
Sbjct: 63 TAAKLGIPMHNVDDVDHIDLTIDGADQIDENFAAIKGGGAALLWEKIVAVNSRRNIWVVD 122
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K L LP+E+ +G ++ LK G RL +NG +D NY+
Sbjct: 123 DTKLAPQL-THYLPVEVIPYGADQLFKRLKYA----GYQPTWRLDQNG-NPVRTDSANYL 176
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+D F +PDP + EL ++ GV+EHGLF+N+VD ++G +D V
Sbjct: 177 IDLHFTKMPDPFKLGRELTSMVGVVEHGLFLNIVDQVVVGRADETIAVFD 226
>gi|162419345|ref|YP_001606027.1| ribose 5-phosphate isomerase A [Yersinia pestis Angola]
gi|162352160|gb|ABX86108.1| ribose 5-phosphate isomerase A [Yersinia pestis Angola]
Length = 236
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 3 ALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
KR AARR I +V DGMTLG+G+G+T+ F+ L +A G ++ +SR T
Sbjct: 5 QNDAKRAAARRVIQDFVFDGMTLGLGSGTTSHFFVRELGQHVAKGLQLTCTTTSRATSEV 64
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I L P +++ +DL+IDG DEID R +IKG G LL EKIIAHA+ R I I DE
Sbjct: 65 ARDVGIELSDPNEMNEIDLTIDGPDEIDRRFNMIKGGGACLLWEKIIAHASKRMICICDE 124
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYI 180
+K V+ LG+ LP+EI F +T ++ V + GL+ +RR G G ++D GN+I
Sbjct: 125 TKIVNCLGQFPLPVEIVPFAWKQTERRVERVLAEQGLHHVPIIRRMGGGHPVITDSGNFI 184
Query: 181 VDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D G I P+ + EL IPG +E+GLF ++G DG V
Sbjct: 185 LDCHCGAIITAPEPLEIELNRIPGGVENGLFTREATGMVVGYFDGSSYV 233
>gi|296110799|ref|YP_003621180.1| ribose-5-phosphate isomerase A [Leuconostoc kimchii IMSNU 11154]
gi|295832330|gb|ADG40211.1| ribose-5-phosphate isomerase A [Leuconostoc kimchii IMSNU 11154]
Length = 229
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 120/223 (53%), Gaps = 8/223 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M+ K+ AA ++Y+ M +G+GTGST F+ LA RV + +S+ T
Sbjct: 1 MNMKNAQKKQAAEATLKYIDSDMIVGLGTGSTVAYFLEALAQSDR---RVIGVTTSKITS 57
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C +IP+ ++V +D+++DG DE+D+ L IKG G ALL EKI+A + I I
Sbjct: 58 QRCAELNIPIVDIDEVDHIDVTVDGADEVDTYLNGIKGGGAALLMEKIVAKNSRENIWIV 117
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK D LG LP+E+ +G + + + GL +LR + + + V+D G+Y
Sbjct: 118 DSSKVHDTLGSFPLPVEVIPYGSGQLIRQFADK----GLFPKLRRQADNNQPVVTDAGHY 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
I+D I +P ++ L + GV+EHGLF+ + D IIG
Sbjct: 174 IIDCHMQTINNPYALAEYLESQVGVVEHGLFLAICDRVIIGGE 216
>gi|229818201|ref|ZP_04448483.1| hypothetical protein BIFANG_03498 [Bifidobacterium angulatum DSM
20098]
gi|229784452|gb|EEP20566.1| hypothetical protein BIFANG_03498 [Bifidobacterium angulatum DSM
20098]
Length = 232
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 125/234 (53%), Gaps = 9/234 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD MK+ A A + V +GM G+GTGST + + L ++ G + + +SR
Sbjct: 1 MDKAQQDAMKKAAGIEAAKLVHNGMIAGLGTGSTVRFLVDELGRRVQEEGLQFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQEQAESFGIKIVDIDDVDHIDVTIDGADEVDKDFNGIKGGGAALLWEKIVATNSNKIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL +G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGQVVKKFE----AKGYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N++VD I P ++ +L N GV+EHGLF+NMVD I+G DG ++
Sbjct: 176 NNFVVDLHLERIDHPTELAEDLINTVGVVEHGLFLNMVDTVIVGNPDGPRILTN 229
>gi|121608898|ref|YP_996705.1| ribose-5-phosphate isomerase A [Verminephrobacter eiseniae EF01-2]
gi|121553538|gb|ABM57687.1| ribose-5-phosphate isomerase [Verminephrobacter eiseniae EF01-2]
Length = 255
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A++YV+ G +G+GTGST +F+ LA + + V S +TE
Sbjct: 16 TQDELKTRVGQAALRYVLPGDIVGVGTGSTVNKFIDALAG-MKEQIKGAVSSSVASTERL 74
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + V S+ + IDG DEID + ++KG G AL REKI+A A RF+ I DE
Sbjct: 75 QAL-GIAVFDANAVPSLSVCIDGADEIDGQGHMLKGGGAALTREKIVAALAERFVCIADE 133
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + G LRLR V+D G +I+
Sbjct: 134 SKLVRTLGQFPLPVEVIPMAARHIARRF----AAMGGQASLRLR--NGQALVTDNGQHIL 187
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVL 229
D I DP ++ PGV+ G+F + ++GT+ G ++
Sbjct: 188 DVKGLSITDPLAFESQVNQWPGVVTVGVFAHQKASVCLLGTAQGVKTLV 236
>gi|145636268|ref|ZP_01791937.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittHH]
gi|145638621|ref|ZP_01794230.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittII]
gi|229846550|ref|ZP_04466658.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 7P49H1]
gi|145270433|gb|EDK10367.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittHH]
gi|145272216|gb|EDK12124.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittII]
gi|229810643|gb|EEP46361.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 7P49H1]
gi|309750120|gb|ADO80104.1| Ribose-5-phosphate isomerase A [Haemophilus influenzae R2866]
gi|309972379|gb|ADO95580.1| Ribose-5-phosphate isomerase A [Haemophilus influenzae R2846]
Length = 219
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 123/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVI 218
>gi|297566226|ref|YP_003685198.1| ribose 5-phosphate isomerase [Meiothermus silvanus DSM 9946]
gi|296850675|gb|ADH63690.1| ribose 5-phosphate isomerase [Meiothermus silvanus DSM 9946]
Length = 230
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 1 MDALQM-KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRN 57
M+ L+ KR AA A+++V GM +G+GTGSTA+ ++ L +I G ++ +P+S
Sbjct: 1 MNDLETYKRQAALEAVRHVQSGMVVGLGTGSTARYAVMELGRRIREGEVKNIRAVPTSEA 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
T + I L VDL+IDG DE+ L LIKG GGALLREKI+ A RF+V
Sbjct: 61 TALLARDAGIELLELGP-EGVDLAIDGADEVAPDLALIKGLGGALLREKIVESNARRFLV 119
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
+ D +KRV+ LGRG++P+EI FG TL+ L ++ E LR G F SDGG
Sbjct: 120 VADYTKRVEQLGRGVVPVEIVPFGYRATLAKLAQL-------GEPSLRMAGEEPFYSDGG 172
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N I D FG I DPQ + L +IPGV+E GLF+ + A++ DG VL +
Sbjct: 173 NLIADVRFGPISDPQGLEARLKSIPGVVESGLFVGIATEAVLAGPDG-VQVLGR 225
>gi|238854957|ref|ZP_04645287.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 269-3]
gi|260664242|ref|ZP_05865095.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii SJ-7A-US]
gi|282931668|ref|ZP_06337161.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 208-1]
gi|313472438|ref|ZP_07812930.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 1153]
gi|238832747|gb|EEQ25054.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 269-3]
gi|239529684|gb|EEQ68685.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 1153]
gi|260562128|gb|EEX28097.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii SJ-7A-US]
gi|281304279|gb|EFA96388.1| ribose 5-phosphate isomerase A [Lactobacillus jensenii 208-1]
Length = 230
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSS 55
MD ++K+ AA+ A V G LG+GTGST K F+ L ++ G ++ ++ +S
Sbjct: 1 MDKNMQDELKKEAAKVAADKVQAGSVLGVGTGSTVKFFIDWLGERKEKEGLTLKHIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + + DV VDL++DG D +DS+L IKG G AL EK +A + +
Sbjct: 61 SRSKKQLESYGFKVDELADVDEVDLTVDGADRVDSQLNGIKGGGAALTLEKNVAVNSKKN 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I DESK VD L LP+E+ + L++ GLN E R+ +G+ +
Sbjct: 121 IWIVDESKVVDHLSGFKLPVEVLPVSCMQVKKRLEKE----GLNPEFRM--DGNKKLTTH 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GNYI+D IP P ++ L + GV+EHGLF+ + D I+ S+G +++
Sbjct: 175 YGNYILDLNISPIPVPNGLADYLDHTVGVVEHGLFLGICDEVIVAKSNGTIQEIKR 230
>gi|254670684|emb|CBA06800.1| ribose 5-phosphate isomerase A [Neisseria meningitidis alpha153]
Length = 223
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAADKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|121605510|ref|YP_982839.1| ribose-5-phosphate isomerase A [Polaromonas naphthalenivorans CJ2]
gi|120594479|gb|ABM37918.1| ribose-5-phosphate isomerase [Polaromonas naphthalenivorans CJ2]
Length = 249
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K + A+ YV G +G+GTGST +F+ LA I + V S+ +TE
Sbjct: 27 MTQDELKTLVGQAALNYVEAGSIVGVGTGSTVNKFIDALA-TIKDQIAGAVSSSNASTER 85
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V + + IDG DEID ++KG G AL REKI+A + RFI I D
Sbjct: 86 LQAL-GIKVFDATEVDELGVYIDGADEIDHAGYMVKGGGAALTREKIVAAQSRRFICIAD 144
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG LP+EI + + G + R V+D G +I
Sbjct: 145 KSKYVATLGGFPLPVEIIPMATRRIARQFE----AMGGAATV--RHKDGKPLVTDNGQHI 198
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
+D I DP E+ PGV+ G+F ++GT DG ++
Sbjct: 199 LDVTGLKIADPLAFESEVSQWPGVVTVGVFAFQKAHVCLLGTDDGVETLV 248
>gi|328466869|gb|EGF37978.1| ribose-5-phosphate isomerase A [Listeria monocytogenes 1816]
Length = 224
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 129/227 (56%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETSKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
I L S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGILLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ FG + L++ L R++ ++V++ GNYI+D
Sbjct: 123 VRNLGKFPLPIEVIPFGWKQIERTLEKEHVQTILR-----RQSSGEIYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D ++ +L IPG++EHGLF++ VD + ++GE +++K
Sbjct: 178 NQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANGEIELIKK 224
>gi|288905137|ref|YP_003430359.1| ribose-5-phosphate isomerase A [Streptococcus gallolyticus UCN34]
gi|325978111|ref|YP_004287827.1| ribose-5-phosphate isomerase A [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731863|emb|CBI13428.1| putative ribose-5-phosphate isomerase A [Streptococcus gallolyticus
UCN34]
gi|325178039|emb|CBZ48083.1| ribose-5-phosphate isomerase A [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 224
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A QYV DGM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EKLKKLAGVTAAQYVKDGMVVGLGTGSTAYFFVEEIGRRMKEEGLKVVGVTTSSQTTAQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +D+ +D+++DG DE+D+ IKG GGALL EKI+A +I + DES
Sbjct: 62 EGLGIPLKAVDDIDVIDVTVDGADEVDTNFNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ ++ + R FV+D NYI+D
Sbjct: 122 KMVDKLGAFKLPVEVVQYGADRIFREFEKKGY------KPSYRMANGERFVTDMKNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV+EHGLF MV+ I+ DG ++ K
Sbjct: 176 LDLGVIENPVELGKELKAMVGVVEHGLFNGMVNKVIVAGKDGVNILEAK 224
>gi|224101807|ref|XP_002312428.1| predicted protein [Populus trichocarpa]
gi|118488529|gb|ABK96077.1| unknown [Populus trichocarpa]
gi|222852248|gb|EEE89795.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 90/234 (38%), Positives = 131/234 (55%), Gaps = 5/234 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A+++V GM LG+GTGSTAK + +AD + G + IP+S T
Sbjct: 32 TQDELKKIAAYKAVEFVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSTKTH 91
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + VDL+IDG DE+DS L L+KG GG+LLREK+I A +FIVI
Sbjct: 92 QQAVSLGIPLSDLDSHPVVDLAIDGADEVDSNLNLVKGRGGSLLREKMIESACKKFIVIV 151
Query: 120 DESKRVDFL-GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK V + G +P+E+ F + L+ + G +LR G +FV+D GN
Sbjct: 152 DQSKLVAHVGASGAMPVEVVPFCWKFSQDRLQNLFDYAGCVAKLRTDNGGEKIFVTDNGN 211
Query: 179 YIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YIVD FF I D ++ S + + GV+EHG+F++M I+ G + K
Sbjct: 212 YIVDLFFKKDIGDLKVASDAILRLAGVVEHGMFLDMATTVIVAGELG-ITIKDK 264
>gi|33126317|gb|AAK95569.1| ribose 5-phosphate isomerase [Homo sapiens]
Length = 237
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 1 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 61 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 120
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 121 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQ---KFGGVVELRMAVNKAGPVVT 177
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 178 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 234
>gi|317968937|ref|ZP_07970327.1| ribose-5-phosphate isomerase A [Synechococcus sp. CB0205]
Length = 237
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 129/237 (54%), Gaps = 12/237 (5%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A + + GM +G+G+GSTA + L K+ +G + + +S E
Sbjct: 5 QDQMKQAVAAAATEQIQSGMVVGLGSGSTAALMIQALGAKLKSGELRDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELGIPLQSLNAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVAVRAKRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ + LKE G + +LR+ +G V+D GN
Sbjct: 125 STKLVDTLNLGFLLPVEVMPGAWRQVQGQLKE----MGGDAQLRMAVKKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD----GECLVLQK 231
++D F G I DP + E+ N+PGV+E+GLF+N+ D ++G + G ++++
Sbjct: 181 VLDVKFSGGIGDPVSLEKEINNLPGVLENGLFVNITDQVLVGEINDGVAGVRDLVKR 237
>gi|261377589|ref|ZP_05982162.1| ribose 5-phosphate isomerase A [Neisseria cinerea ATCC 14685]
gi|269146337|gb|EEZ72755.1| ribose 5-phosphate isomerase A [Neisseria cinerea ATCC 14685]
Length = 223
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +FI I DE
Sbjct: 61 LAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRR----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT+ G ++
Sbjct: 171 DVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTAAGAKVI 218
>gi|218710588|ref|YP_002418209.1| ribose-5-phosphate isomerase A [Vibrio splendidus LGP32]
gi|254765238|sp|B7VK98|RPIA_VIBSL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|218323607|emb|CAV19864.1| Ribose-5-phosphate isomerase A [Vibrio splendidus LGP32]
Length = 218
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV +G +G+GTGST F+ L + + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALQYVEEGSIVGVGTGSTVNHFIDALG-TMKDKIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV +D+ +DG DEI+ +IKG G AL REKI+A + +FI I D
Sbjct: 60 LEAL-EIKVFECNDVFKLDIYVDGADEINGSRDMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R +D GN I
Sbjct: 119 GTKAVDVLGKFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------CTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + + I GV+ GLF + D I GT +G +
Sbjct: 169 LDVYGMAIENPKQLEDIINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|15669799|ref|NP_248613.1| ribose-5-phosphate isomerase A [Methanocaldococcus jannaschii DSM
2661]
gi|6831640|sp|Q58998|RPIA_METJA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|158429448|pdb|2PJM|A Chain A, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|158429449|pdb|2PJM|B Chain B, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|158429450|pdb|2PJM|C Chain C, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|158429451|pdb|2PJM|D Chain D, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|260656416|pdb|3IXQ|A Chain A, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|260656417|pdb|3IXQ|B Chain B, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|260656418|pdb|3IXQ|C Chain C, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|260656419|pdb|3IXQ|D Chain D, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
gi|1500500|gb|AAB99623.1| ribose 5-phosphate isomerase [Methanocaldococcus jannaschii DSM
2661]
Length = 226
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M +K A+ A++ V DGM +G+GTGSTA F+ L ++I V IP+S +
Sbjct: 1 MSNEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELGNRIREEELTVFGIPTSFEAK 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGALLREKIIAHAASRFIVI 118
+ IPL + ++ VD++ DG DE++ LIKG GG +EKI+ + A+ F+V+
Sbjct: 61 MLAMQYEIPLVTLDEYD-VDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVL 119
Query: 119 GDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V + +P+E+ + AL E G +RL G ++D G
Sbjct: 120 VDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSE----MGGEAVIRLGDRKRGPVITDNG 175
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N I+D F I D + E+ NIPGV+E+G+F VD ++GT G L+K
Sbjct: 176 NMIIDV-FMNIDDAIELEKEINNIPGVVENGIFT-KVDKVLVGTKKG-VKTLKK 226
>gi|86146376|ref|ZP_01064700.1| ribose-5-phosphate isomerase A [Vibrio sp. MED222]
gi|85835855|gb|EAQ53989.1| ribose-5-phosphate isomerase A [Vibrio sp. MED222]
Length = 218
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+QYV +G +G+GTGST F+ L + + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALQYVEEGSIVGVGTGSTVNHFIDALG-TMKDKIKGAVSSSVASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV +D+ +DG DEI+ +IKG G AL REKI+A + +FI I D
Sbjct: 60 LEAL-EIKVFECNDVFKLDIYVDGADEINGSRDMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R +D GN I
Sbjct: 119 GTKAVDVLGKFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------CTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D + I +P+ + + I GV+ GLF + D I GT +G +
Sbjct: 169 LDVYGMAIENPKQLEDIINGIAGVVTVGLFAHRGADVVITGTPEGAKI 216
>gi|23466172|ref|NP_696775.1| ribose-5-phosphate isomerase A [Bifidobacterium longum NCC2705]
gi|227546518|ref|ZP_03976567.1| ribose-5-phosphate isomerase A [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239621515|ref|ZP_04664546.1| ribose-5-phosphate isomerase A [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312133916|ref|YP_004001255.1| rpia [Bifidobacterium longum subsp. longum BBMN68]
gi|317482176|ref|ZP_07941199.1| ribose 5-phosphate isomerase A [Bifidobacterium sp. 12_1_47BFAA]
gi|322691829|ref|YP_004221399.1| ribose-5-phosphate isomerase [Bifidobacterium longum subsp. longum
JCM 1217]
gi|30173312|sp|Q8G3X9|RPIA_BIFLO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|23326911|gb|AAN25411.1| probable ribose 5-phosphate isomerase [Bifidobacterium longum
NCC2705]
gi|227213067|gb|EEI80946.1| ribose-5-phosphate isomerase A [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239515390|gb|EEQ55257.1| ribose-5-phosphate isomerase A [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|311773210|gb|ADQ02698.1| RpiA [Bifidobacterium longum subsp. longum BBMN68]
gi|316916410|gb|EFV37809.1| ribose 5-phosphate isomerase A [Bifidobacterium sp. 12_1_47BFAA]
gi|320456685|dbj|BAJ67307.1| ribose-5-phosphate isomerase [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 232
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSR 56
MD +K+ A A + V +GM G+GTGST K + L + G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLVENGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQAQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL +G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGQVIKKFE----ARGYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 176 NNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
>gi|123966902|ref|YP_001011983.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9515]
gi|123201268|gb|ABM72876.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. MIT
9515]
Length = 231
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 128/228 (56%), Gaps = 8/228 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ A A++ V DGM +G+G+GSTA + LA++I G ++ +P+S +E
Sbjct: 1 MKQIVADAAVKEVKDGMIVGLGSGSTAALMIKSLAEQIRLGKLKNIKGVPTSFQSEVLSL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL VS +DL+IDG DE+D +LIKG G +REK++A A++ +++ DE+K
Sbjct: 61 ELKIPLIDLASVSQIDLAIDGADEVDPDFQLIKGGGACHVREKLVASKANKLLIVVDETK 120
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V L LP+E+ + K++ S +LR+ +G V+D GN I+D
Sbjct: 121 LVQQLNLVFPLPVEVLPSAWKQV----KDIISEMNGVSDLRMATKKAGPVVTDQGNLILD 176
Query: 183 AFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
F I DP+ + + NIPGV+E+GLF+N+ D ++G + VL
Sbjct: 177 VLFNTGIKDPKDLEMRINNIPGVLENGLFVNLTDKVLVGKIENNVPVL 224
>gi|282896746|ref|ZP_06304754.1| Ribose 5-phosphate isomerase [Raphidiopsis brookii D9]
gi|281198464|gb|EFA73352.1| Ribose 5-phosphate isomerase [Raphidiopsis brookii D9]
Length = 236
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 128/229 (55%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V G +G+GTGST + L D++ +G + IP+S +E K
Sbjct: 11 MKQEVGKAAASLVKSGSIVGLGTGSTTAYTIQFLGDRLKSGELKDIVGIPTSFQSEVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + V +D++IDG DE+D LIKG G A REK++ + AS+FIV+ D K
Sbjct: 71 HYGVPLTTLDAVDHIDIAIDGADEVDPNKNLIKGGGAAHTREKVVDYLASQFIVVVDSGK 130
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ + ++A+K+ G N ELR+ +G ++D GN +VD
Sbjct: 131 LVDHLGSTFAVPVEVIPMAITPVVNAIKK----LGGNPELRMGVKKAGPVITDQGNMVVD 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + L NIPG++E+G+F+N VD +IG DG+ V Q
Sbjct: 187 VKFDTIEDPVNLEKTLNNIPGILENGIFVNCVDLVLIGEVIDGKPSVRQ 235
>gi|168032596|ref|XP_001768804.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679916|gb|EDQ66357.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 253
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 8/235 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
++K+ AA +A++YV GM LG+GTGSTA + + + + G + +P+S+ T
Sbjct: 20 TQDELKKIAAEKAVEYVKSGMVLGLGTGSTAAFAVAKIGELLKEGKLTDIVGVPTSKRTA 79
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+++F+VI
Sbjct: 80 EQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVIV 139
Query: 120 DESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K V + +P+E+ QF LK + G E++LR +G +V+D
Sbjct: 140 DETKLVKGLGGSKLAMPVEVVQFCWKYNAERLKNLPELAGC--EVKLRMDGDKPYVTDNS 197
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYI+D +F I D + + + GV++HGLF+NM II SDG V K
Sbjct: 198 NYIIDLYFEEPIVDANAAAQAISALEGVVDHGLFLNMASAVIIAGSDG-VTVQTK 251
>gi|319762907|ref|YP_004126844.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans BC]
gi|330824986|ref|YP_004388289.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans K601]
gi|317117468|gb|ADU99956.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans BC]
gi|329310358|gb|AEB84773.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans K601]
Length = 229
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K R A+ YVV G +G+GTGST +F+ LA + V S +T
Sbjct: 8 SQDELKTLVGRAALDYVVPGEIVGVGTGSTVNKFIDALA-TVKERIGGAVSSSEASTARL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ +V+S+ + IDG DEID R ++KG G AL REKI+A A RF+ I DE
Sbjct: 67 KAL-GIPVLDANEVASLSVYIDGADEIDGRGYMVKGGGAALTREKIVAALAQRFVCIADE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG LP+E+ ++ + G LRLR V+D G +I+
Sbjct: 126 SKLVSVLGAFPLPVEVIPMAASQIARRFE----SLGGQATLRLRDGR--PLVTDNGQHIL 179
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
D I DP E+ PGV+ G+F ++GT+ G +
Sbjct: 180 DVRGLAIGDPLAFESEVNQWPGVVTVGVFARQKAHVCLLGTAQGVRTL 227
>gi|313124833|ref|YP_004035097.1| ribose-5-phosphate isomerase [Halogeometricum borinquense DSM
11551]
gi|312291198|gb|ADQ65658.1| ribose-5-phosphate isomerase [Halogeometricum borinquense DSM
11551]
Length = 228
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR AA RA V G T+G+GTGSTA + L + +G ++ +P+S + +
Sbjct: 8 DDQKRRAAERAADLVETGATVGLGTGSTAAFAIRALGRAVEDGLDIRGVPTSFASRELAR 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + ++V ++D++IDG D++D L LIKG G A REKI+ A RF+V+ D SK
Sbjct: 68 EEGIPLVAVDEVETIDVAIDGADQLDGDLNLIKGGGAAHAREKIVDAMADRFVVVADPSK 127
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ L R +P+E+ + + E LR G V+D GN ++D
Sbjct: 128 VTETLER-AVPLEVLPDARTAAAARVSE----LDGEATLRRAERKDGPVVTDNGNLVLDC 182
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
FG I DP+ ++ +L PGV+EHGLF+ + D A IGT DG
Sbjct: 183 EFGQISDPESLAADLSATPGVVEHGLFVGLADEAYIGTDDGV 224
>gi|94676715|ref|YP_589070.1| ribose-5-phosphate isomerase A [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|166200033|sp|Q1LSJ4|RPIA_BAUCH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|94219865|gb|ABF14024.1| ribose 5-phosphate isomerase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 223
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 117/229 (51%), Gaps = 12/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV GM +G+GTGST F+ L + + V S ++T
Sbjct: 1 MMHEKLKKAVGWAALEYVSSGMIIGVGTGSTTDHFIDALG-TVKHKIEGVVSSSEQSTTK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I L + DV +D+ +DG DEI+S +++IKG G AL REK++A AA++FI I D
Sbjct: 60 L-KSMGILLFNLNDVDGLDIYVDGTDEINSNMQMIKGGGAALTREKVLAAAANKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG LPIE+ E+ G + R ++D GN I
Sbjct: 119 TSKQVDILGNFPLPIEVIPMAHAWVAR---ELVHLTGGLPKYRQG------VITDNGNII 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + I D + + NIPGV+ GLF N D A+I + G +
Sbjct: 170 LDIYNLKILDAIALEKIINNIPGVVTVGLFANRCADIALISSDLGIEEI 218
>gi|306831215|ref|ZP_07464376.1| ribose 5-phosphate isomerase A [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426781|gb|EFM29892.1| ribose 5-phosphate isomerase A [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 224
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A QYV DGM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EKLKKMAGVTAAQYVKDGMVVGLGTGSTAYFFVEEIGRRMKEEGLKVVGVTTSSQTTAQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +D+ +D+++DG DE+D+ IKG GGALL EKI+A +I + DES
Sbjct: 62 EGLGIPLKAVDDIDVIDVTVDGADEVDTNFNGIKGGGGALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ ++ + R FV+D NYI+D
Sbjct: 122 KMVDKLGAFKLPVEVVQYGADRIFREFEKKGY------KPSYRMANGERFVTDMKNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV+EHGLF MV+ I+ DG ++ K
Sbjct: 176 LDLGVIENPVELGKELKAMVGVVEHGLFNGMVNKVIVAGKDGVNILEAK 224
>gi|298369354|ref|ZP_06980672.1| ribose 5-phosphate isomerase A [Neisseria sp. oral taxon 014 str.
F0314]
gi|298283357|gb|EFI24844.1| ribose 5-phosphate isomerase A [Neisseria sp. oral taxon 014 str.
F0314]
Length = 223
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S +
Sbjct: 3 TQDELKRVAAEKAVEFVPENEYIGIGTGSTINIFIEALGKSGKQ--IKGAVSTSVKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP S DVS + + +DG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAKYGIPEVSLSDVSGLAVYVDGADEVNRMLQMIKGGGGAHLNEKIVASASDKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + G ELR+ F + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVIPHARSLVSRK----LVAMGGEPELRVG------FTTFNGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
D I P + E+ I GV+E+G+F N D I+GT G ++L
Sbjct: 171 DVHGLHIDRPVSMEDEINRITGVVENGIFGHNAADVLILGTEQGAKVIL 219
>gi|255020818|ref|ZP_05292874.1| Ribose 5-phosphate isomerase A [Acidithiobacillus caldus ATCC
51756]
gi|254969609|gb|EET27115.1| Ribose 5-phosphate isomerase A [Acidithiobacillus caldus ATCC
51756]
Length = 223
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 109/227 (48%), Gaps = 13/227 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +K AA A+ Y+ GM +G+GTGST+ F+ L A + SS TE
Sbjct: 1 MDVRALKEMAAEAALSYIQPGMVVGVGTGSTSNLFIDALGR--AQIHVEGYVASSLATEA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K +P+ + + IDG DEID RLIKG GGAL REKI+A AA RFI I D
Sbjct: 59 RLKSLGLPVLDLNATGDIPVYIDGADEIDPHFRLIKGGGGALTREKIVASAARRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK LG LP+E+ F + G + LR +D GN I
Sbjct: 119 NSKDKPALGSFPLPVEVIPFARSFVARQ----LVKLGGSPVLRKD------VTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGEC 226
+D + DP + + +IPGV+++G+F D ++G+ G
Sbjct: 169 LDVTGLDLTDPLAMEMRINSIPGVLDNGIFAQRRADVVLMGSESGLI 215
>gi|255640161|gb|ACU20371.1| unknown [Glycine max]
Length = 281
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 130/235 (55%), Gaps = 7/235 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+KR AA +A++ V GM LG+GTGSTA + L +A+G + +P+S+ TE
Sbjct: 49 TQDDLKRLAADKAVESVKSGMVLGLGTGSTAAFVVAKLGALLASGQLSDIVGVPTSKRTE 108
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+ +F+V+
Sbjct: 109 EQARSLGIPLSVLDDNPRLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVV 168
Query: 120 DESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D++K VD +P+E+ QF L L+E+ G+ +LRL +V+D
Sbjct: 169 DDTKLVDGLGGSELAMPVEVVQFCWKYNLDRLQELFKEEGVEAKLRL-EESGKPYVTDNS 227
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F I D E+ + GV+EHGLF+NM II G V K
Sbjct: 228 NYIVDLYFKTPIRDALAAGAEISALEGVVEHGLFLNMATSVIIAGKSG-VEVKAK 281
>gi|16272412|ref|NP_438625.1| ribose-5-phosphate isomerase A [Haemophilus influenzae Rd KW20]
gi|260580473|ref|ZP_05848301.1| ribose 5-phosphate isomerase A [Haemophilus influenzae RdAW]
gi|1173141|sp|P44725|RPIA_HAEIN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|1573442|gb|AAC22123.1| ribose 5-phosphate isomerase A (rpiA) [Haemophilus influenzae Rd
KW20]
gi|260092815|gb|EEW76750.1| ribose 5-phosphate isomerase A [Haemophilus influenzae RdAW]
Length = 219
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P I EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEIEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVI 218
>gi|34393836|dbj|BAC83440.1| putative ribose-5-phosphate isomerase [Oryza sativa Japonica Group]
Length = 258
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 131/229 (57%), Gaps = 6/229 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
+KR AA RA++ V GM LG+GTGSTA + + +A+G + +P+S+ T
Sbjct: 26 TQDDLKRLAAVRAVEQVESGMVLGLGTGSTAAFAVAEIGALLASGKLSGIVGVPTSKRTF 85
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + +D +DL+IDG DE+D L L+KG GGALLREK++ A+ +FIV+
Sbjct: 86 EQAQSLGIPLSTLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVV 145
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K V LG +P+E+ QF L+++ + G +LRL G +V+D
Sbjct: 146 DETKLVTGLGGSGLAMPVEVVQFCWKYNQVRLQDLFNDEGCEAKLRL-DEGGKPYVTDNS 204
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
NYIVD +F I D E+ + GV+EHGLF++M II +DG
Sbjct: 205 NYIVDLYFKTPIKDALAAGKEISALEGVVEHGLFLDMATSVIIAGTDGV 253
>gi|295676353|ref|YP_003604877.1| ribose 5-phosphate isomerase [Burkholderia sp. CCGE1002]
gi|295436196|gb|ADG15366.1| ribose 5-phosphate isomerase [Burkholderia sp. CCGE1002]
Length = 231
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV G +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDELKQLVGQAAADYVNANVPQGSVIGVGTGSTANCFIDALAAT--KSRYRGAVSSSL 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H + ++ S+ + +DG DEID +IKG GGAL REKI+A + F+
Sbjct: 59 ATTARLQSHGFKVFDLNEIDSLPVYVDGADEIDRSGAMIKGGGGALTREKIVASVSEVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ LG+ LPIE+ + G +R+ + G+ F++D
Sbjct: 119 CIADASKVVETLGKFPLPIEVVPMARTAIGRR----VTALGGVPVVRVTKEGA-PFITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I DP+ + + PGV+ GLF + ++GT G +
Sbjct: 174 GNEIIDVKGLSISDPRTLEAHINAWPGVVTVGLFAGRGANLCLLGTDTGVQTI 226
>gi|332360805|gb|EGJ38611.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK49]
Length = 225
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +++ VD+++DG DE+D+ IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDEIDFVDVTVDGADEVDTAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + G N R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERA----GYNPS--FRQKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + +L +I GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQKLDHIVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|148825256|ref|YP_001290009.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittEE]
gi|166200044|sp|A5UA25|RPIA_HAEIE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|148715416|gb|ABQ97626.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittEE]
Length = 219
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AA+ A++YV +G+G+GST F+ L I N + + +S+ +E
Sbjct: 1 MDQLEMKKLAAQAALEYVKADTIVGVGSGSTVNCFIEALG-TIKNKIQ-GAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LVALGGAPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGVATNGIFALRGADVVIVGTPEGAKII 218
>gi|145634539|ref|ZP_01790248.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittAA]
gi|145268084|gb|EDK08079.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittAA]
Length = 219
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A++YV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALKYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ G++ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGIVTNGIFALRGADVVIVGTPEGAKII 218
>gi|223996325|ref|XP_002287836.1| ribose-5-phosphate isomerase [Thalassiosira pseudonana CCMP1335]
gi|220976952|gb|EED95279.1| ribose-5-phosphate isomerase [Thalassiosira pseudonana CCMP1335]
Length = 242
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 11/237 (4%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
++K+ +AI YV GM +G+GTGSTA + L K+ +G + +P+S T
Sbjct: 3 SQEELKKQTGYKAIDDYVTSGMKVGLGTGSTAYYAVERLGQKLKSGELRDIVAVPTSIRT 62
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + + S +D++IDG D +D L+KG GGALLREK++ AA +FIVI
Sbjct: 63 KEQAESLGIPLVTLNEHSKLDVAIDGADNVDPEFNLVKGGGGALLREKMVELAADKFIVI 122
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR------NGSGL 171
DESK + +P+EI F +N T+ ++ + SC G LR+ +G +
Sbjct: 123 VDESKLCEGMGPGFPIPVEITPFCMNHTIRTIEALPSCAGCKPVLRMGSSSNNKVDGDEI 182
Query: 172 FVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
V+D GNYIVD F I D ++ +L GV++HGLF M II +DG +
Sbjct: 183 AVTDNGNYIVDLHFTENIKDVPKMASDLKATCGVVDHGLFCGMTTACIIAGADGIVV 239
>gi|301169185|emb|CBW28782.1| ribose 5-phosphate isomerase, constitutive [Haemophilus influenzae
10810]
Length = 219
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 124/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYR------EDVVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F ++ D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGVVTNGIFALHGADVVIVGTPEGAKVI 218
>gi|148233638|ref|NP_001084550.1| ribose 5-phosphate isomerase A [Xenopus laevis]
gi|46250175|gb|AAH68951.1| MGC83218 protein [Xenopus laevis]
Length = 235
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 121/236 (51%), Gaps = 9/236 (3%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M + KR A A+ +V + LG+G+GST + LA+++ +V +P+S
Sbjct: 1 MT-EEAKRLAGCAAVDNHVKNNQALGIGSGSTIVHAVNRLAERVKQENLKVVCVPTSFQA 59
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + L + +D++IDG DE+DS L LIKG GG L +EKI+A A FIVI
Sbjct: 60 RQLILQNGLVLTDLDRHPELDVAIDGADEVDSDLNLIKGGGGCLAQEKIVAGCAKSFIVI 119
Query: 119 GDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D K + +PIE+ + AL+ FG ELR+ + +G V+D
Sbjct: 120 ADYRKDSKNFGEQWKKGVPIEVIPMAYVPVIKALQSR---FGGVAELRMAVSKAGPVVTD 176
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN+++D F + D + ++ E+ IPGV++ GLFINM + G DG + K
Sbjct: 177 NGNFLLDWKFDKVHDWRTVNTEIKMIPGVVDTGLFINMAERVYFGMEDGTVTIRDK 232
>gi|145630357|ref|ZP_01786138.1| ribose-5-phosphate isomerase A [Haemophilus influenzae R3021]
gi|144984092|gb|EDJ91529.1| ribose-5-phosphate isomerase A [Haemophilus influenzae R3021]
Length = 219
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LVALGGSPEYR------EDVVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVI 218
>gi|23336290|ref|ZP_00121513.1| COG0120: Ribose 5-phosphate isomerase [Bifidobacterium longum
DJO10A]
gi|189440612|ref|YP_001955693.1| ribose-5-phosphate isomerase A [Bifidobacterium longum DJO10A]
gi|322689888|ref|YP_004209622.1| ribose-5-phosphate isomerase [Bifidobacterium longum subsp.
infantis 157F]
gi|238692044|sp|B3DQF7|RPIA_BIFLD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|189429047|gb|ACD99195.1| Ribose 5-phosphate isomerase [Bifidobacterium longum DJO10A]
gi|291516434|emb|CBK70050.1| ribose-5-phosphate isomerase [Bifidobacterium longum subsp. longum
F8]
gi|320461224|dbj|BAJ71844.1| ribose-5-phosphate isomerase [Bifidobacterium longum subsp.
infantis 157F]
Length = 232
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSR 56
MD +K+ A A + V +GM G+GTGST K + L + G + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLVENGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQVQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + + G LRL +G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGQVIKKFE----ARGYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 176 NNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
>gi|226359911|ref|YP_002777689.1| ribose-5-phosphate isomerase A [Rhodococcus opacus B4]
gi|226238396|dbj|BAH48744.1| ribose-5-phosphate isomerase A [Rhodococcus opacus B4]
Length = 252
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 3/231 (1%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
K R A++ Y DG LG+G+G+T+ F+ L +K+A G + +P+S T +
Sbjct: 8 QDAAKYAVGRAAVERYAHDGAQLGLGSGTTSAWFVRALGEKVAEGLDIVGVPTSTATRDL 67
Query: 62 CKIHHIPLHSPEDVSS-VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I L D+ +D+++DG DE+D +IKG G LL E+++A A+ + + I D
Sbjct: 68 ALSVGITLIDLNDLDRPLDVTLDGPDEVDHDGDMIKGGGACLLWERMVAEASLKMVCIAD 127
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGL-NEELRLRRNGSGLFVSDGGNY 179
++K V+ LG LPIE+ FG T ++ + G + ++ R+ V+D GN+
Sbjct: 128 DTKLVERLGSFPLPIEVIPFGWKATRRSISALFRDLGYTDIDIVQRQRDGQPVVTDSGNF 187
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+DA I D ++ L I GV+E+GLF + +I + DG +++
Sbjct: 188 ILDAHMVAITDKALLDTNLNWIAGVVENGLFTGIAHEILIASPDGAAKLIE 238
>gi|83718667|ref|YP_443035.1| ribose-5-phosphate isomerase A [Burkholderia thailandensis E264]
gi|83652492|gb|ABC36555.1| ribose 5-phosphate isomerase A [Burkholderia thailandensis E264]
Length = 235
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV D G +G+GTGSTA F+ LA + + +R V S
Sbjct: 5 MTQDELKRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 63
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 64 TTERL-KSHGIRVFDLNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFV 122
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 123 CIADASKRVAMLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGT-PYVTDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 178 GNEILDVKGLRIDDPRALEAAINGWPGVVTVGLFAQRGADLCLLGTEHGVETLR 231
>gi|91788718|ref|YP_549670.1| ribose-5-phosphate isomerase A [Polaromonas sp. JS666]
gi|123059750|sp|Q129M0|RPIA_POLSJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|91697943|gb|ABE44772.1| ribose-5-phosphate isomerase [Polaromonas sp. JS666]
Length = 240
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K + A+ YV G +G+GTGST +F+ LA + + V S +TE
Sbjct: 14 MTQDELKALVGQAALPYVEPGSIVGVGTGSTVNKFIDALA-TMKDRIAGAVSSSVASTER 72
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I + +V + + IDG DEID +IKG G AL REKI+A + +F+ I D
Sbjct: 73 LQA-IGIKVFDATEVDELAVYIDGADEIDHAGYMIKGGGAALTREKIVAAQSRKFVCIAD 131
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL--RRNGSGLFVSDGGN 178
ESK V LG LP+E+ + + G LR V+D G
Sbjct: 132 ESKLVQTLGSFPLPVEVIPMAARRIARQF----AALGGTATLRSKGGAESGEPLVTDNGQ 187
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
+I+D I DP ++ PGV+ G+F ++G SDG ++
Sbjct: 188 HILDVTGLKITDPLGFESQVNQWPGVVTVGVFAFQKAHVCLLGASDGVRTLV 239
>gi|220935937|ref|YP_002514836.1| ribose 5-phosphate isomerase [Thioalkalivibrio sp. HL-EbGR7]
gi|254765236|sp|B8GNF8|RPIA_THISH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|219997247|gb|ACL73849.1| ribose 5-phosphate isomerase [Thioalkalivibrio sp. HL-EbGR7]
Length = 218
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ QMK+ AA AI+YV GM +G+GTGSTA F+ LLA I + V S + +
Sbjct: 1 MNQDQMKKAAAEAAIEYVESGMIVGVGTGSTANHFIDLLAA-IKDRIDGTVASSEASAQR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + + L +DG DE ++ L LIKG GGAL REKI+A A+ +F+ I D
Sbjct: 60 L-RGHGIQVMDLNTAGQLPLYVDGADESNAELHLIKGGGGALTREKIVAAASDKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LG LP+E+ + G LR F +D GN I
Sbjct: 119 ESKLVDVLGAFPLPVEVIPMARAYVARE----LTKLGGQPVLREG------FTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP + + +PGV+ G+F D I+G++ G +
Sbjct: 169 LDVHNLQISDPVAMEDHINQLPGVVTVGIFAQRPADVLILGSAGGIRKI 217
>gi|167620196|ref|ZP_02388827.1| ribose-5-phosphate isomerase A [Burkholderia thailandensis Bt4]
gi|257139264|ref|ZP_05587526.1| ribose-5-phosphate isomerase A [Burkholderia thailandensis E264]
Length = 231
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV D G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIRVFDLNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 119 CIADASKRVAMLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGT-PYVTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 174 GNEILDVKGLRIDDPRALEAAINGWPGVVTVGLFAQRGADLCLLGTEHGVETLR 227
>gi|312796225|ref|YP_004029147.1| ribose 5-phosphate isomerase [Burkholderia rhizoxinica HKI 454]
gi|312168000|emb|CBW75003.1| Ribose 5-phosphate isomerase (EC 5.3.1.6) [Burkholderia rhizoxinica
HKI 454]
Length = 254
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 107/234 (45%), Gaps = 13/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ A YV +G +G+GTGSTA F+ LA + +R V S
Sbjct: 23 MTQAELKQLVGHAAADYVNTHVPEGAVIGVGTGSTANCFIDALASS-RDRYRGAVSSSVA 81
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T H + DV S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 82 TTNRLL-SHGFRVFELGDVESLPVYVDGADEIDPHGAMIKGGGGALTREKIVASVADVFV 140
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSD 175
I D SK V LG LP+E+ + ++ LR G F++D
Sbjct: 141 CIADGSKLVPTLGTFPLPVEVVPMARVAVARRIAQLT-----AGTPVLRLTHDGAPFMTD 195
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I DP + ++ PGV+ GLF D ++GT G +
Sbjct: 196 NGNEILDVKALAIDDPVALERDMNQWPGVVTVGLFAARGADLCLVGTEHGVQRI 249
>gi|332366816|gb|EGJ44557.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK1059]
Length = 225
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDEVDFVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFREKDDQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD II G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIIAGKSG 217
>gi|269468052|gb|EEZ79770.1| ribose 5-phosphate isomerase [uncultured SUP05 cluster bacterium]
Length = 224
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 12/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK A+ A++YVV +G+GTGSTA F+ LA + + SS T
Sbjct: 5 MTQDEMKFAVAQEALKYVVKDTIIGVGTGSTANFFIDALATMKDD--IKGCVASSVATAE 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + +V ++ + IDG DE D L LIKG GGAL REKI+A A +F+ I D
Sbjct: 63 RLEGHGIKVFDLNEVEAISVYIDGADESDDGLNLIKGGGGALTREKIVAAVADKFVCIAD 122
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V +G LP+E+ N ++ G +R FV+D GN I
Sbjct: 123 ESKFVKTMGDFPLPVEVIPMAANYV---KHQITRRIGGTPFVREN------FVTDNGNLI 173
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP+ + EL +I GV+ +GLF N + ++GT G +V
Sbjct: 174 LDVEGLKITDPKALETELDSIVGVVTNGLFANRGANVLLLGTPTGVTVV 222
>gi|332361129|gb|EGJ38933.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK1056]
Length = 225
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDEVDFVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFREKDDQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|330505468|ref|YP_004382337.1| ribose-5-phosphate isomerase A [Pseudomonas mendocina NK-01]
gi|328919754|gb|AEB60585.1| ribose-5-phosphate isomerase A [Pseudomonas mendocina NK-01]
Length = 223
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 18/236 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ Q+K+ A+ A+ +++ +G+GTGSTA F+ LA + SS
Sbjct: 1 MNQDQLKQAVAQAAVDHILPRLDSKSIVGVGTGSTANFFIDALAKHKME--FDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE D RL LIKG G AL REKI+A A FI
Sbjct: 59 ATAARLKGHGIPVYDLNAVSDLEFYVDGADESDERLNLIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + R ++D
Sbjct: 119 CIADASKLVPVLGEFPLPVEVIPMARSHVARE----LVKLGGDPVYREG------VLTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
GN I+D I DP + ++ I GV+ +GLF D ++GT++G L++
Sbjct: 169 GNIILDVHNMSIVDPVKLEADINAIVGVVTNGLFAARPADLLLLGTAEG-VKTLKR 223
>gi|297746207|emb|CBI16263.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A++YV GM LG+GTGSTAK + + + + G + IP+S+ T
Sbjct: 55 TQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKMTH 114
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + +DL+IDG DE+D L L+KG GG+LLREK++ A +F+VI
Sbjct: 115 EQAVSLGIPLSDLDSYPILDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVVIV 174
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V++LG +P+EI F T L+ + G +LR +NG FV+D
Sbjct: 175 DESKLVNYLGGSGLAMPVEIVPFCWKFTAQRLQMLFEESGCVAKLRTYQNGE-PFVTDNM 233
Query: 178 NYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYIVD +F I D ++ S + + GV+EHG+FI+M I+ G +
Sbjct: 234 NYIVDLYFKREIGDLKVASDAILRLAGVVEHGMFIDMATTLIVAGECGVIV 284
>gi|332967820|gb|EGK06919.1| ribose 5-phosphate isomerase A [Kingella kingae ATCC 23330]
Length = 222
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M Q+KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 1 MTKQDQLKRAAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVTTSKKSS 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP + +VS + + IDG DEI+ L++IKG GGA L EKI+A A +FI I
Sbjct: 59 ELMAQYEIPEIAANEVSRLSIYIDGADEINHTLQMIKGGGGAHLPEKIVAKLADQFICIA 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V LG+ LPIE+ + + + G ELR+ + S GN
Sbjct: 119 DESKYVSRLGKFPLPIEVIPMARSMVARQIAK----LGGQPELRIG------YKSLHGND 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D + P + EL I G++E+GLF D I+ DG L+
Sbjct: 169 ILDVTGLDLSQPLTMERELNQITGLVENGLFAERAADLLILAREDGIELI 218
>gi|34496715|ref|NP_900930.1| ribose-5-phosphate isomerase A [Chromobacterium violaceum ATCC
12472]
gi|41017648|sp|Q7NYL4|RPIA_CHRVO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|34102570|gb|AAQ58935.1| ribose 5-phosphate isomerase A [Chromobacterium violaceum ATCC
12472]
Length = 219
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 107/229 (46%), Gaps = 14/229 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
Q+K A++A+++V + +G+GTGST F+ LA G + SS +
Sbjct: 3 TQDQLKLAVAKKALEFVPEDAIIGVGTGSTVNLFIEELA--GIKGRIKGAVSSSEASTAR 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K HHI + +V + + IDG DEI+ L +IKG G AL REKI+A A FI I DE
Sbjct: 61 LKAHHIQVFDLNEVEKLSVYIDGADEINHHLHMIKGGGAALTREKIVAGVADEFICIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V LG LPIE+ + G + ELR +D GN I+
Sbjct: 121 KKYVTMLGAFPLPIEVIPMARSYVARE----LVKLGGHPELRQG------VTTDNGNVIL 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
D I P + + +I GV+ GLF D ++G DG VL
Sbjct: 171 DVHGLQIMKPVELEETINHIAGVVTCGLFARRRADVLLLGKQDG-VEVL 218
>gi|145347245|ref|XP_001418084.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578312|gb|ABO96377.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 250
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 128/234 (54%), Gaps = 11/234 (4%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
++K+ +++ +V GM +G+GTGSTA + + K+A+G V IP+S T
Sbjct: 4 SQDELKKLVGYKSVDDHVTSGMVVGLGTGSTAYYAVERVGQKLASGELKDVICIPTSERT 63
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ +IPL + + S +D++IDG DE+D L L+KG GGALLREK++ A +F+VI
Sbjct: 64 REQAESLNIPLCTLNEKSELDVAIDGADEVDPALALVKGGGGALLREKMVEVMAKKFVVI 123
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR------RNGSGL 171
DESK LP+EI F TL + ++ + G LR+ +G +
Sbjct: 124 VDESKLCKGLGPGFPLPVEITPFCHMHTLRTIGKLPALAGCEPILRMGSSSNNKNDGDNI 183
Query: 172 FVSDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
V+D GNYIVD F + DP + +L N GV++HGLF+ M I+ SDG
Sbjct: 184 AVTDNGNYIVDLHFKTPLADPVAAANQLKNTVGVVDHGLFVGMAYQVIVAGSDG 237
>gi|255571294|ref|XP_002526596.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
gi|223534036|gb|EEF35755.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
Length = 264
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 133/235 (56%), Gaps = 7/235 (2%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
++K+ AA +A+++V GM LG+GTGSTAK + +AD + G + IP+S+ T+
Sbjct: 29 QDELKKIAAYKAVEFVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLTNIVGIPTSKKTQK 88
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + VDL+IDG DE+DS L L+KG GG+LLREK+I A +FIVI D
Sbjct: 89 QALSLGIPLSDLDSHPVVDLAIDGADEVDSHLNLVKGRGGSLLREKMIESACKKFIVIVD 148
Query: 121 ESKRVDFL--GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-SGLFVSDGG 177
E+K V + G +P+E+ F T L+ + G +LR G FV+D G
Sbjct: 149 ETKLVPHIGANGGAMPVEVVPFCWKFTQEKLQSLFDYAGCVAKLRTDNGGKEEPFVTDNG 208
Query: 178 NYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD FF I D ++ S ++ + GV+EHG+F++M I+ G + K
Sbjct: 209 NYIVDLFFKKEIGDLEVASDKILRLAGVVEHGMFLDMATTVIVAGELG-ITIKNK 262
>gi|313638571|gb|EFS03715.1| ribose 5-phosphate isomerase A [Listeria seeligeri FSL S4-171]
Length = 224
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 123/227 (54%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A ++V DGM +G+GTGST + L + + G ++ + +S T +
Sbjct: 3 NQKKIAGEKACEWVEDGMVVGLGTGSTVYYTIEKLGELVQQGLKITGVATSEQTARQAEK 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV +D++IDG DE+ + IKG GGALLREK++A A+ I + E K
Sbjct: 63 LGIPLKSLNDVVEIDITIDGADEVTGAFQGIKGGGGALLREKMVAEASRLNIWVVGEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
VD LG LP+E+ FG + +L++ L + ++ ++ GNYI+D
Sbjct: 123 VDSLGNFPLPLEVIPFGWKQIKRSLEKEGIQATLRTQ-----QNKEIYQTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P +L +PG++E GLF+N VD I G +DGE +++K
Sbjct: 178 NQTFTNPIKWQEKLAQVPGIVEQGLFLNYVDIIICGKADGEIELIKK 224
>gi|194476582|ref|YP_002048761.1| Ribose 5-phosphate isomerase [Paulinella chromatophora]
gi|171191589|gb|ACB42551.1| Ribose 5-phosphate isomerase [Paulinella chromatophora]
Length = 237
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 8/225 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK A A++ + DGM LG+G+GSTA + L +I N + + +S E
Sbjct: 5 QDQMKHAVAEAAVEQIRDGMILGLGSGSTAALMIKSLGKRIKNKELRDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S + +DL+IDG DE+D +LIKG G ++EK++A A+RF+V+ D
Sbjct: 65 LAAELGIPLKSLNAIGHIDLAIDGADEVDPNFQLIKGGGACHVQEKLVAARANRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K V+ L +LPIE+ ++ K G ELR+ + +G V+D GN
Sbjct: 125 STKLVNRLNLAFLLPIEVLPGAWHQV----KIELEAMGAKAELRMAQRKAGPIVTDQGNL 180
Query: 180 IVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
I+DA F I DP + ++ NIPGV+E+GLF+N+VD ++G +
Sbjct: 181 IIDASFKDGIIDPINLELQINNIPGVLENGLFVNLVDQVLVGEIN 225
>gi|325958771|ref|YP_004290237.1| Ribose-5-phosphate isomerase A [Methanobacterium sp. AL-21]
gi|325330203|gb|ADZ09265.1| Ribose-5-phosphate isomerase A [Methanobacterium sp. AL-21]
Length = 224
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
++KR A + + DG +G+GTGST F+ L +I ++ IP+S + K
Sbjct: 4 EIKRKVGYLAAEQIKDGDVVGLGTGSTTHFFIEKLGKRIVDEELKLLGIPTSYQSFFLAK 63
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
I + + E+ VD+++DG DE+D + LIKG G A EKI+ +AS+F+VI D SK
Sbjct: 64 DARIQITTLEEHD-VDIAVDGADEVDPKFNLIKGGGAAHTLEKIVDSSASKFVVIVDGSK 122
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
VD LG +P+E+ ++ G + +R+ G V+D GN+I D
Sbjct: 123 MVDKLGNFPVPVEVIPQASRTV----RDQLIKMGGSPTMRMAERKDGPVVTDNGNFIYDV 178
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
F + +P+++ EL +PGV+E+G+F ++VD ++GT G L+K
Sbjct: 179 KFS-VDNPKLLEVELNALPGVVENGIFTDIVDEVLVGTEKG-VETLKK 224
>gi|15226223|ref|NP_178238.1| ribose-5-phosphate isomerase [Arabidopsis thaliana]
gi|6226027|sp|Q9ZU38|RPIA_ARATH RecName: Full=Probable ribose-5-phosphate isomerase; AltName:
Full=Phosphoriboisomerase
gi|4262236|gb|AAD14529.1| putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
gi|15809810|gb|AAL06833.1| At2g01290/F10A8.17 [Arabidopsis thaliana]
gi|17978867|gb|AAL47405.1| At2g01290/F10A8.17 [Arabidopsis thaliana]
gi|91805381|gb|ABE65420.1| unknown [Arabidopsis thaliana]
gi|330250335|gb|AEC05429.1| ribose 5-phosphate isomerase A [Arabidopsis thaliana]
Length = 265
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 9/238 (3%)
Query: 1 MD--ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSR 56
M+ ++KR AA +A+++V GM LG+GTGSTAK + + + + G + IP+S+
Sbjct: 29 MNLTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSK 88
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ IPL + +DLSIDG DE+D L L+KG GG+LLREK+I A+ +F+
Sbjct: 89 KTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFV 148
Query: 117 VIGDESKRVDFL--GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
VI D+SK V + + LP+EI F T L+ + +G LRL G FV+
Sbjct: 149 VIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKA-FVT 207
Query: 175 DGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GNYIVD + D +S + +PGV+EHG+F++M II G + K
Sbjct: 208 DNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELG-VKIKNK 264
>gi|294668342|ref|ZP_06733445.1| hypothetical protein NEIELOOT_00254 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309660|gb|EFE50903.1| hypothetical protein NEIELOOT_00254 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 222
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 14/230 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+KR A +A+++V D +G+GTGST F+ LA + SS+ T
Sbjct: 3 TQDDLKRMAGEKAVEFVPDNEYIGIGTGSTVNYFIKALAASGKQ--IKGAVSSSKATSAL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + IP + DV + + IDG DEI+ L++IKG GGALLREKI+A A+ +F+ I DE
Sbjct: 61 LEQYEIPEVTLSDVIHLAVYIDGADEINHSLQMIKGGGGALLREKIVASASDKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + G +LR+ F++D GN I+
Sbjct: 121 SKYVSRLGKFPLPVEVIPAARSLVARQ----LLKLGGEPQLRVG------FITDSGNEIL 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQ 230
D + P + EL I GV+E+GLF + D I+ + G V++
Sbjct: 171 DVADMDLSRPLTLEDELNKITGVVENGLFARDAADVLILARA-GGVEVIK 219
>gi|327460277|gb|EGF06614.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK1057]
Length = 225
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V +GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQNGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLDIPLKSIDEVDFVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPSFRQKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|24379658|ref|NP_721613.1| ribose-5-phosphate isomerase A [Streptococcus mutans UA159]
gi|290580347|ref|YP_003484739.1| putative ribose 5-phosphate isomerase A [Streptococcus mutans
NN2025]
gi|30173276|sp|Q8DTT9|RPIA_STRMU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|316983217|pdb|3L7O|A Chain A, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Streptococcus Mutans Ua159
gi|316983218|pdb|3L7O|B Chain B, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Streptococcus Mutans Ua159
gi|24377612|gb|AAN58919.1|AE014959_13 putative ribose 5-phosphate isomerase A [Streptococcus mutans
UA159]
gi|254997246|dbj|BAH87847.1| putative ribose 5-phosphate isomerase A [Streptococcus mutans
NN2025]
Length = 225
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A RA QYV DGM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EELKKIAGVRAAQYVEDGMIVGLGTGSTAYYFVEEVGRRVQEEGLQVIGVTTSSRTTAQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V SVD+++DG DE+D IKG GGALL EKI+ +I + DES
Sbjct: 62 QALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G + ++ + R FV+D N+I+D
Sbjct: 122 KMVDTLGAFRLPVEVVQYGAERLFREFEKKGY------KPSFREYDGVRFVTDMKNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G IPDP L + GV+EHGLF MV+ I+ DG +L+
Sbjct: 176 LDLGSIPDPIAFGNMLDHQVGVVEHGLFNGMVNRVIVAGKDG-VRILE 222
>gi|319944180|ref|ZP_08018456.1| ribose-5-phosphate isomerase A [Lautropia mirabilis ATCC 51599]
gi|319742475|gb|EFV94886.1| ribose-5-phosphate isomerase A [Lautropia mirabilis ATCC 51599]
Length = 229
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
++K+ AA +A++++ G +G+G+GST F+ L + Q + SS +
Sbjct: 10 QDELKKAAAEKALEWLTPGQVVGVGSGSTVGFFIEALGRHRQD--FPQAVSSSLRSTELL 67
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + + + +DG DE+D LIKG GGAL REKI+A A+ F+ I DE+
Sbjct: 68 REAGIEVLDLNQIDEIGCYVDGADEVDPGFALIKGGGGALTREKIVAQASRHFVCIVDET 127
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG+ LP+E+ ++ L+ L +R R +++D GN I+D
Sbjct: 128 KYVPVLGQFPLPVEVVPMALHLVGRQLEA------LGGTVRERNG----YITDNGNPILD 177
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGE 225
I DP + + PGV+ GLF + ++ T DG
Sbjct: 178 VSGLQIHDPVALEETINQWPGVVTVGLFARRRPETVLLATMDGV 221
>gi|121997966|ref|YP_001002753.1| ribose-5-phosphate isomerase A [Halorhodospira halophila SL1]
gi|121589371|gb|ABM61951.1| ribose-5-phosphate isomerase [Halorhodospira halophila SL1]
Length = 219
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 14/229 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M Q KR AA A++YV + +G+GTGST F+ LAD + + V S +T+
Sbjct: 1 MS-DQGKRLAAEAALEYVEEDAYVGVGTGSTVNLFIDALAD-MRDRIAGAVSSSEASTQR 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + + +DG DE + L+LIKG GGAL REKI+A A+ RF+ + D
Sbjct: 59 L-RDRGIDVIDLNSAGRLPVYVDGADEANRFLQLIKGGGGALTREKIVASASDRFVCVAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+ K VD LG LP+E+ + G ELR F +D GN I
Sbjct: 118 DGKMVDVLGAFPLPVEVIPMARSTVARE----LVRLGGRPELREG------FTTDNGNVI 167
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
+D I +P + L NIPGV+ +G+F + D ++G+ G +
Sbjct: 168 LDVHGLSITEPIKLEQTLNNIPGVVTNGIFALRPADLLLLGSDSGVRRL 216
>gi|167582031|ref|ZP_02374905.1| ribose-5-phosphate isomerase A [Burkholderia thailandensis TXDOH]
Length = 231
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV D G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIRVFDLNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 119 CIADASKRVAMLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGT-PYVTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 174 GNEILDVKGLRIDDPRALEATINGWPGVVTVGLFAQRGADLCLLGTEHGVETLR 227
>gi|23200407|pdb|1M0S|A Chain A, Northeast Structural Genomics Consortium (Nesg Id Ir21)
gi|23200408|pdb|1M0S|B Chain B, Northeast Structural Genomics Consortium (Nesg Id Ir21)
Length = 219
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P I EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEIEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVI 218
>gi|222110845|ref|YP_002553109.1| ribose-5-phosphate isomerase a [Acidovorax ebreus TPSY]
gi|221730289|gb|ACM33109.1| ribose 5-phosphate isomerase [Acidovorax ebreus TPSY]
Length = 229
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A+QYVV G +G+GTGST +F+ LA I + R V S +T
Sbjct: 8 SQDELKTLVGQAALQYVVPGELVGVGTGSTVNKFIDALA-SIKDSIRGAVSSSEASTARL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ DV + + IDG DEID ++KG G AL REKI+A A RF+ I DE
Sbjct: 67 KAL-GIPVLDANDVRLLSVYIDGADEIDGNGYMVKGGGAALTREKIVAALARRFVCIADE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V+ LG LP+E+ + L + LR V+D G +I+
Sbjct: 126 SKLVNVLGAFPLPVEVIPMAAAYIARRFES------LGGQATLRLKDGQPLVTDNGQHIL 179
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
D I DP E+ PGV+ G+F + + ++GT+ G +
Sbjct: 180 DVRGLTISDPLAFETEVNQWPGVVTVGVFALQKANVCLLGTAQGVRTL 227
>gi|91783280|ref|YP_558486.1| ribose-5-phosphate isomerase A [Burkholderia xenovorans LB400]
gi|123358856|sp|Q13ZQ5|RPIA_BURXL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|91687234|gb|ABE30434.1| ribose-5-phosphate isomerase [Burkholderia xenovorans LB400]
Length = 231
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV +G +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDELKQLVGQAAADYVNANVPEGSVIGVGTGSTANCFIDALAA--GKTRYRGAVSSSL 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H + ++ S+ + +DG DEID +IKG GGAL REKI+A + F+
Sbjct: 59 ATTARLQSHGFKVLDLNEIDSLPVYVDGADEIDHSGAMIKGGGGALTREKIVASVSDVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ LG LPIE+ + G +R+ + G F++D
Sbjct: 119 CIADASKLVETLGSFPLPIEVVPMARTSIGRR----VTALGGVPVVRVTKEGV-PFITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF + D ++GT G +
Sbjct: 174 GNEIIDVKGLRISDPRTLETHVNAWPGVVTVGLFASRGADLCLLGTDTGVDTIR 227
>gi|241668757|ref|ZP_04756335.1| ribose-5-phosphate isomerase A [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254877288|ref|ZP_05249998.1| ribose-5-phosphate isomerase A [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843309|gb|EET21723.1| ribose-5-phosphate isomerase A [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 224
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++KR AA A +++ + LG+GTGST + L + + + V S +T+
Sbjct: 8 NQDELKRAAAIEAAKHIKSEIVLGVGTGSTVAFLIEELVN-YKDKIKSVVSSSEDSTKKL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +DL IDG DE ++ LIKG G AL REKI AA +FI I DE
Sbjct: 67 KAL-GFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LP+E+ + + ++ E+ ++D GN I+
Sbjct: 126 SKKVNTLGEFPLPVEVIPMARSYVAREIVKLGGQPVYREQT----------ITDNGNVIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
D + I +P + EL I GV+ +G+F + D I+ DG
Sbjct: 176 DVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMARKDGSIK 222
>gi|113460269|ref|YP_718327.1| ribose-5-phosphate isomerase A [Haemophilus somnus 129PT]
gi|123327076|sp|Q0I101|RPIA_HAES1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|112822312|gb|ABI24401.1| ribose-5-phosphate isomerase [Haemophilus somnus 129PT]
Length = 219
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L MK+ AA+ A+QYV +G+G+GST F+ +L I + + +S+ +E
Sbjct: 1 MDQLSMKKMAAQAALQYVKPDSIIGVGSGSTVNCFIEVLG-TIKETIK-GAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I + S DVS +D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLLRQGIEVFSANDVSGLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LPIE+ ++ G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFALPIEVIPMARSQVARK----LVALGGSPEYREN------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D + I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVYNFKIMNPIEMEKELNNVAGVVTNGIFALRSADIVIVGTPEGTKII 218
>gi|170718309|ref|YP_001785322.1| ribose-5-phosphate isomerase A [Haemophilus somnus 2336]
gi|189043817|sp|B0URT3|RPIA_HAES2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|168826438|gb|ACA31809.1| ribose 5-phosphate isomerase [Haemophilus somnus 2336]
Length = 219
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L MK+ AA+ A+QYV +G+G+GST F+ +L I + + +S+ +E
Sbjct: 1 MDQLSMKKMAAQAALQYVKPDSIIGVGSGSTVNCFIEVLG-TIKETIK-GAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I + S DVS +D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLLRQGIEVFSANDVSGLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LPIE+ ++ G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFALPIEVIPMARSQVARK----LVALGGSPEYREN------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D + I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVYNFKIMNPIEMEKELNNVAGVVTNGIFALRSADIVIVGTPEGTKII 218
>gi|145640436|ref|ZP_01796020.1| ribose-5-phosphate isomerase A [Haemophilus influenzae R3021]
gi|145275022|gb|EDK14884.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 22.4-21]
Length = 219
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 122/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I N + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKNKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFSANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGAPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ G++ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGIVTNGIFALRGADVVIVGTPEGAKII 218
>gi|328475330|gb|EGF46103.1| ribose-5-phosphate isomerase A [Listeria monocytogenes 220]
Length = 229
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/226 (34%), Positives = 129/226 (57%), Gaps = 5/226 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + NG + + +S T +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETSKQAQN 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+ + I + E K
Sbjct: 63 LGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG+ LPIE+ FG + L++ L R++ ++V++ GNYI+D
Sbjct: 123 VRNLGKFPLPIEVIPFGWKQIERTLEKEHIQTILR-----RQSSGEIYVTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D ++ +L IPG++EHGLF++ VD + ++GE +++
Sbjct: 178 NQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANGEIELIK 223
>gi|241763756|ref|ZP_04761803.1| ribose 5-phosphate isomerase [Acidovorax delafieldii 2AN]
gi|241366975|gb|EER61371.1| ribose 5-phosphate isomerase [Acidovorax delafieldii 2AN]
Length = 230
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A+QYVV G +G+GTGST +F+ LA + + R V S +TE
Sbjct: 8 TQDELKALVGQAALQYVVPGDIVGVGTGSTVNKFIDALAG-MKDQIRGAVSSSIASTERL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + DV S+ + IDG DE+D + ++KG G AL REKI+A A RF+ I DE
Sbjct: 67 KAL-GIAVFDANDVESLAVYIDGADEVDGQGYMVKGGGAALTREKIVAALARRFVCIVDE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LGR LP+E+ L E RLR V+D G +I+
Sbjct: 126 SKLVPSLGRFPLPVEVIPMAAQHIGRRFAA------LGGEARLRLKDGEPLVTDNGQHIL 179
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
D I DP E+ PGV+ G+F + ++GT+ G
Sbjct: 180 DVTGLSITDPLAFESEVNQWPGVVTVGVFAHQKASVCLMGTAQGVVKT 227
>gi|226506270|ref|NP_001151138.1| LOC100284771 [Zea mays]
gi|195634641|gb|ACG36789.1| ribose-5-phosphate isomerase [Zea mays]
gi|195635347|gb|ACG37142.1| ribose-5-phosphate isomerase [Zea mays]
gi|195641308|gb|ACG40122.1| ribose-5-phosphate isomerase [Zea mays]
gi|195644532|gb|ACG41734.1| ribose-5-phosphate isomerase [Zea mays]
gi|224030977|gb|ACN34564.1| unknown [Zea mays]
Length = 274
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 7/229 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
+KR AA RA++ V GM LG+GTGSTA + + +A G ++ +P+S+ T
Sbjct: 43 TQDDLKRLAAVRAVEQVKSGMVLGLGTGSTAAFAVAEIGALLAAGKLEKIVGVPTSKRTF 102
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + +D +DL+IDG DE+D L L+KG GGALLREK++ A+ +FIVI
Sbjct: 103 EQAQSLGIPLSTLDDNPLIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVIV 162
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K VD LG +P+E+ QF L L+E+ G+ E +LR G +V+D
Sbjct: 163 DETKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGV--EAKLRFEGDKPYVTDNS 220
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
NYIVD +F I D E+ + GV++HGLF+NM II +DG
Sbjct: 221 NYIVDLYFKTPIKDALAAGQEIAALEGVVDHGLFLNMASSVIIAGTDGV 269
>gi|225075246|ref|ZP_03718445.1| hypothetical protein NEIFLAOT_00246 [Neisseria flavescens
NRL30031/H210]
gi|241758810|ref|ZP_04756923.1| ribose 5-phosphate isomerase A [Neisseria flavescens SK114]
gi|261380156|ref|ZP_05984729.1| ribose 5-phosphate isomerase A [Neisseria subflava NJ9703]
gi|224953421|gb|EEG34630.1| hypothetical protein NEIFLAOT_00246 [Neisseria flavescens
NRL30031/H210]
gi|241321018|gb|EER57231.1| ribose 5-phosphate isomerase A [Neisseria flavescens SK114]
gi|284796994|gb|EFC52341.1| ribose 5-phosphate isomerase A [Neisseria subflava NJ9703]
Length = 223
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP S +V + + +DG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAKYEIPEVSLNEVMGLAVYVDGADEVNHALQMIKGGGGAHLNEKIVASASDKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVENARSLVSRK----LLAMGGQPELRVG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
D I + E+ I GV+E+G+F + D ++GT++G ++L
Sbjct: 171 DVHGLNIDQALKMEDEINKITGVLENGIFARDAADVLVLGTAEGAKVIL 219
>gi|211827629|gb|AAH53526.2| Rpia protein [Mus musculus]
Length = 252
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A+ A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 17 MSKAEEAKKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQ 76
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 77 ARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIV 136
Query: 118 IGDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K L +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 137 IADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVAQ---KFGGEVELRMAVNKAGPVVT 193
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + PGV++ GLFINM + G DG V +K
Sbjct: 194 DNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 250
>gi|90023027|ref|YP_528854.1| ribose-5-phosphate isomerase A [Saccharophagus degradans 2-40]
gi|123395590|sp|Q21F87|RPIA_SACD2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|89952627|gb|ABD82642.1| ribose-5-phosphate isomerase [Saccharophagus degradans 2-40]
Length = 226
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/232 (35%), Positives = 117/232 (50%), Gaps = 17/232 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ A+ A+ Y+ D M LG+GTGSTA+ F+ LLA G + SS
Sbjct: 1 MTQDELKQAVAQAALDYILPHLEDDMILGIGTGSTARLFIDLLAAH--KGKFDGAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H IP++ V S+ IDG DE +++L LIKG G AL REKII A +FI
Sbjct: 59 ASSEQLKGHGIPVYDLNSVDSLPFYIDGADEANAQLHLIKGGGAALTREKIITAVADKFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG+ LP+E+ + + G N R V+D
Sbjct: 119 CIADASKDVDVLGKFPLPVEVIPMARAHVAREIVK----LGGNPVHRQD------CVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
G I+D + I D + +L NI GV+ +GLF + D ++GT++G
Sbjct: 169 GCQILDVYDLAIHDAPALEAKLNNIAGVVTNGLFALRPADVLLLGTTNGVET 220
>gi|325179884|emb|CCA14286.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 922
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 122/230 (53%), Gaps = 9/230 (3%)
Query: 6 MKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFC 62
KR AAR+A+ Y+ D M +G+G+GST + L++ + +G + IP+S +
Sbjct: 687 AKRTAARKAVDEYIRDNMVVGIGSGSTIIYAIERLSELVRDGNLTHIDCIPTSFQAKQLL 746
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ + + + S ++ +D++IDG DE+DS L IKG GG L+EKI+A+ + FI++ D
Sbjct: 747 QEYKLSITSLDEHPVIDVAIDGADEVDSALNCIKGGGGCQLQEKIVAYNSKVFIIVADSR 806
Query: 123 KRVDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
K+ LG +PIE+ + +++ LR+ ++ G V+D GN+
Sbjct: 807 KKSTQLGEKWTQGVPIEVLPVAYVPIMKLIEQRLE---GESVLRMAQSKVGPVVTDNGNF 863
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I+D FG I +PQ + L IPGVI GLF M A G +G V
Sbjct: 864 ILDTDFGRIGNPQELHDHLVKIPGVIGVGLFCGMAQKAFFGEQNGSVTVR 913
>gi|269468267|gb|EEZ79951.1| ribose 5-phosphate isomerase [uncultured SUP05 cluster bacterium]
Length = 230
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 12/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK A+ A++YVV +G+GTGSTA F+ LA + + SS T
Sbjct: 11 MTQDEMKFAVAQEALKYVVKDTIIGVGTGSTANFFIDALATMKDD--IKGCVASSVATAE 68
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + +V ++ + IDG DE D L LIKG GGAL REKI+A A +F+ I D
Sbjct: 69 RLEGHGIKVFDLNEVEAISVYIDGADESDDGLNLIKGGGGALTREKIVAAVADKFVCIAD 128
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V +G LP+E+ N ++ G +R FV+D GN I
Sbjct: 129 ESKFVKTMGDFPLPVEVIPMAANYV---KHQITRRIGGTPFVREN------FVTDNGNLI 179
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP+ + EL +I GV+ +GLF N + ++GT G +V
Sbjct: 180 LDVEGLKITDPKALETELDSIVGVVTNGLFANRGANVLLLGTPTGVTVV 228
>gi|150017229|ref|YP_001309483.1| ribose 5-phosphate isomerase [Clostridium beijerinckii NCIMB 8052]
gi|149903694|gb|ABR34527.1| ribose 5-phosphate isomerase [Clostridium beijerinckii NCIMB 8052]
Length = 233
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 93/228 (40%), Positives = 138/228 (60%), Gaps = 9/228 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD KR A ++ +Y+ DGM LG+GTGSTA + + + I NG +++ + +S++TE+
Sbjct: 1 MDQ---KRVAGEKSTEYIKDGMILGLGTGSTAYYMIKKVGELIKNGMKIKAVATSKSTES 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL S ++V +DL+IDG DEID+ IKG GGAL REKI+A A+ I I D
Sbjct: 58 LARELKIPLLSIDEVDRIDLAIDGVDEIDNEFNAIKGGGGALFREKIVASLANEVIWIMD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD +G LP+EI +G + L++ + LN ++R+ +FV+D GNYI
Sbjct: 118 ESKLVDGIGEFPLPVEILPYGYKHVIKELQDYS----LNPKIRM--KEEEIFVTDNGNYI 171
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
VD G + + ++ I GV+E GLFINM + IIGT+ G ++
Sbjct: 172 VDLHIGTPMNINDVYNKVNRITGVLETGLFINMCNRIIIGTNSGAKII 219
>gi|319760392|ref|YP_004124330.1| ribose 5-phosphate isomerase A [Candidatus Blochmannia vafer str.
BVAF]
gi|318039106|gb|ADV33656.1| ribose 5-phosphate isomerase A [Candidatus Blochmannia vafer str.
BVAF]
Length = 223
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 14/231 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++Y+ +G+GTGST F+ L I + V+ SS+N+
Sbjct: 1 MKQDELKKAVGWAALKYIKFNTIIGIGTGSTVSYFINALG-SIKEKI-IGVVSSSKNSSI 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+++ ++ ++D+ ID DEID +++IKG GGAL +EKI+A AA +FI I D
Sbjct: 59 QLKKVGIPIYNFNNIDNLDVYIDSADEIDKYMQMIKGGGGALTQEKILAFAAKQFICIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LGRG LP+E+ + + G E R V+D GN I
Sbjct: 119 SSKQVDILGRGPLPVEVIPMARSLVA----KELIRLGGLPEYRYG------VVTDNGNSI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I + ++ + NIPGV+ G+F + D +I T +G VL
Sbjct: 169 LDVHNMNIINASLLEERINNIPGVVSVGIFAHRKADVVLISTKNG-IKVLN 218
>gi|307825427|ref|ZP_07655646.1| ribose 5-phosphate isomerase [Methylobacter tundripaludum SV96]
gi|307733602|gb|EFO04460.1| ribose 5-phosphate isomerase [Methylobacter tundripaludum SV96]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ A+ Y+ D +G+GTGST F+ L D A+ + SS +
Sbjct: 1 MTQDELKQKVAQAALHYIKDVAIIGVGTGSTVNHFIDYLVDFRAD--IEGAVSSSIASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ V ++D+ +DG DE++ +L+KG GGAL REKIIA A+ +F+ I D
Sbjct: 59 RLKKIGIPVLDLNAVGTLDVYVDGADEVNPHKQLVKGGGGALTREKIIAAASKKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+K VD LG+ LP+E+ + G R F++D N I
Sbjct: 119 ETKCVDVLGKFPLPVEVVPMARSYVARE----LVKLGGQPVWREN------FITDNHNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
+D I +P + + NI GV+ G+F D +IG + E L
Sbjct: 169 LDVHNLDIIEPIKLEQIINNITGVVTVGIFAMRPADVVLIGKGN-EVTTL 217
>gi|148827661|ref|YP_001292414.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittGG]
gi|166200045|sp|A5UGX5|RPIA_HAEIG RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|148718903|gb|ABR00031.1| ribose-5-phosphate isomerase A [Haemophilus influenzae PittGG]
Length = 219
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LVALGGSPEYR------EDVVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVSGVVTNGIFALRGADVVIVGTPEGAKII 218
>gi|33862045|ref|NP_893606.1| ribose 5-phosphate isomerase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|41017654|sp|Q7V003|RPIA_PROMP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33634263|emb|CAE19948.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 231
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 8/228 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ A AI+ V DGM LG+G+GSTA + LA+KI +G ++ +P+S +E
Sbjct: 1 MKQIVADSAIEEVEDGMILGLGSGSTAALMIKSLAEKIRSGKLKNIKGVPTSFQSEVLAL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL V +DL+IDG DE+D +LIKG G +REK++A A++ +++ DESK
Sbjct: 61 ELNIPLIDLASVPYIDLAIDGADEVDPDFQLIKGGGACHVREKLVASKANKLLIVIDESK 120
Query: 124 RVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V L + LP+E+ + K++ S LR+ +G V+D GN I+D
Sbjct: 121 LVQNLNQVFPLPVEVMPSAWKQV----KDIISEMSGVSNLRMATKKAGPVVTDQGNLILD 176
Query: 183 AFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
F I DP+ + + NIPGV+E+GLF+++ D ++G + + VL
Sbjct: 177 VLFDAGIRDPKDLEMRINNIPGVLENGLFVDLADKVLVGKIEDDVPVL 224
>gi|87301298|ref|ZP_01084139.1| Ribose 5-phosphate isomerase [Synechococcus sp. WH 5701]
gi|87284266|gb|EAQ76219.1| Ribose 5-phosphate isomerase [Synechococcus sp. WH 5701]
Length = 237
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTEN 60
+MK A A+ + DGM LG+G+GSTA + L ++ G + + +S E
Sbjct: 5 QDRMKLAVATAAVDQIRDGMVLGLGSGSTAALMIRELGARLRRGELSAITGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S VS +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELGIPLQSLNAVSRIDLAIDGADEVDPAFQLIKGGGACHVQEKLVARRADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK V L +LP+E+ +K G +LR+ +G V+D GN
Sbjct: 125 SSKLVKRLNLEFLLPVEVLPGAW----RQVKAELEAMGATADLRMAVKKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS-DGECLVLQ 230
++D F G I DP + + N+PGV+E+GLF+ + D ++G DGE V
Sbjct: 181 VLDLKFAGGITDPAALEQAINNLPGVLENGLFVGLTDQVLVGEIVDGEPRVRD 233
>gi|167526415|ref|XP_001747541.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773987|gb|EDQ87621.1| predicted protein [Monosiga brevicollis MX1]
Length = 272
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 119/234 (50%), Gaps = 9/234 (3%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
Q K AA A+ +V DG +G+G+GST + LA ++ RV IP+S
Sbjct: 38 TVAQAKLRAAYAAVDNHVKDGQVVGIGSGSTVVFAVQRLAQRVRDENLRVICIPTSFQAR 97
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + L +D++IDG DE+ ++L IKG GG LL+EKI+A A + I+I
Sbjct: 98 QLILENKLVLGDLNANPVLDVAIDGADEVSAQLDCIKGGGGCLLQEKIVASNADQLIIIA 157
Query: 120 DESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
D SK D+ + + +P+E+ + L++ G LR+ + +G V+D
Sbjct: 158 DYSKIADYLGSVWKKGVPLEVIADCYVPIMRKLEK----MGGKPVLRMAKAKAGPCVTDN 213
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
GN+IVD FG + +P + +L +IPG++E G F+ M A G DG L
Sbjct: 214 GNFIVDCDFGVMQEPAKLEQQLLSIPGLVETGFFLQMAVKAYFGMQDGSVKTLD 267
>gi|260775225|ref|ZP_05884123.1| ribose 5-phosphate isomerase A [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608926|gb|EEX35088.1| ribose 5-phosphate isomerase A [Vibrio coralliilyticus ATCC
BAA-450]
Length = 218
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ L I + + V S +TE
Sbjct: 1 MTQDEMKKEAGWAALKYVEKDSIVGVGTGSTVNHFIDALG-TIKDDIKGAVSSSEASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +VS++D+ +DG DEI++ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 LKGL-GIEVFDCNEVSNLDVYVDGADEINAARDMIKGGGAALTREKIVAAISDKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG LP+E+ + + + G + R V+D GN I
Sbjct: 119 GTKAVDVLGEFPLPVEVIPMARSYVAREMVK----LGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I P+ + ++ I GV+ GLF + D I GT G +
Sbjct: 169 LDVHGMQITHPKEMEDKINAIAGVVTVGLFAHRGADVVITGTPQGAKI 216
>gi|332530785|ref|ZP_08406712.1| ribose-5-phosphate isomerase A [Hylemonella gracilis ATCC 19624]
gi|332039772|gb|EGI76171.1| ribose-5-phosphate isomerase A [Hylemonella gracilis ATCC 19624]
Length = 225
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 10/231 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K + A+QYVV G +G+GTGST +F+ LA + + + V S +TE
Sbjct: 1 MTQDELKTLVGQAALQYVVPGDIVGVGTGSTVNKFIDALA-SMKDQIKGAVSSSVISTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP+ +V + + IDG DEID +IKG G AL REKI+A A RF+ I D
Sbjct: 60 L-KAIGIPVFDANEVGELSVYIDGADEIDGAGCMIKGGGAALTREKIVAAQARRFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG+ LP+E+ + + + + LR V+D G +I
Sbjct: 119 ESKLVQVLGQFPLPVEVIPMATRRITRQFEAMG------GTVTLRLKDGVPLVTDNGQHI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVLQ 230
+D I DP E+ PGV+ G+F + ++GT+ G VL
Sbjct: 173 LDVRGLQIRDPLAFESEVNQWPGVVTVGVFAHQRAQICLLGTASG-VRVLN 222
>gi|260582270|ref|ZP_05850063.1| ribose 5-phosphate isomerase A [Haemophilus influenzae NT127]
gi|260094638|gb|EEW78533.1| ribose 5-phosphate isomerase A [Haemophilus influenzae NT127]
Length = 219
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYREGG------VTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ G++ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGIVTNGIFALRGADVVIVGTPEGAKII 218
>gi|54310219|ref|YP_131239.1| ribose-5-phosphate isomerase A [Photobacterium profundum SS9]
gi|67461420|sp|Q6LMP0|RPIA_PHOPR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|46914660|emb|CAG21437.1| putative ribose-5-phosphate isomerase [Photobacterium profundum
SS9]
Length = 219
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVTKGSIVGVGTGSTVNHFIDAL-ETRKEEIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K+ IP+ +V+ +D+ +DG DEI++ +IKG G AL REKI+A + +FI I D
Sbjct: 60 LEKL-GIPVFEANEVAGLDIYVDGADEINAEYDMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K+VD LG+ LP+E+ + G + E R V+D GN I
Sbjct: 119 DTKQVDVLGQFPLPVEVIPMARSFIGRE----LVKLGGDPEYREG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + ++ +PGV+ GLF D ++G +G
Sbjct: 169 IDVHNMAITDAKDMEKKINALPGVVTVGLFAARGADVLLVGAPEGVRK 216
>gi|254362643|ref|ZP_04978732.1| ribose-5-phosphate isomerase [Mannheimia haemolytica PHL213]
gi|153094257|gb|EDN75128.1| ribose-5-phosphate isomerase [Mannheimia haemolytica PHL213]
Length = 219
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +MK+ AA+ A+++V +G+G+GST F+ LA + +S+ +E
Sbjct: 1 MDQQEMKKIAAQAALKFVKPDTIVGVGSGSTVNCFIDALASMKDE--IKGAVAASKASEQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S +V+ +D+ IDG DEI + +IKG G AL REKI++ A +FI I D
Sbjct: 59 RLRDIGIEVFSANEVTELDVYIDGADEITPQGAMIKGGGAALTREKIVSSLAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 KSKQVDVLGSTFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT +G ++
Sbjct: 169 ILDVHNFKIMEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAVIL 218
>gi|146319103|ref|YP_001198815.1| ribose-5-phosphate isomerase A [Streptococcus suis 05ZYH33]
gi|146321305|ref|YP_001201016.1| ribose-5-phosphate isomerase A [Streptococcus suis 98HAH33]
gi|253752152|ref|YP_003025293.1| ribose 5-phosphate isomerase A [Streptococcus suis SC84]
gi|253753978|ref|YP_003027119.1| ribose 5-phosphate isomerase A [Streptococcus suis P1/7]
gi|253755913|ref|YP_003029053.1| ribose 5-phosphate isomerase A [Streptococcus suis BM407]
gi|166229249|sp|A4W2M7|RPIA_STRS2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166229251|sp|A4VWC6|RPIA_STRSY RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|145689909|gb|ABP90415.1| Ribose 5-phosphate isomerase [Streptococcus suis 05ZYH33]
gi|145692111|gb|ABP92616.1| Ribose 5-phosphate isomerase [Streptococcus suis 98HAH33]
gi|251816441|emb|CAZ52076.1| ribose 5-phosphate isomerase A [Streptococcus suis SC84]
gi|251818377|emb|CAZ56204.1| ribose 5-phosphate isomerase A [Streptococcus suis BM407]
gi|251820224|emb|CAR46642.1| ribose 5-phosphate isomerase A [Streptococcus suis P1/7]
gi|292558739|gb|ADE31740.1| Ribose 5-phosphate isomerase [Streptococcus suis GZ1]
gi|319758537|gb|ADV70479.1| ribose-5-phosphate isomerase A [Streptococcus suis JS14]
Length = 224
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+K +A ++V DGM +G+GTGSTA F+ + ++A G ++ + +S T
Sbjct: 3 NLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVQEIGRRVAEEGLQITGVTTSHATAEHAA 62
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + ++V VDL++DG DE+D IKG G ALL EK++A + I I DESK
Sbjct: 63 SLGIPLKNIDEVEYVDLTVDGADEVDGDFNGIKGGGAALLMEKVVAVNSKDCIWIVDESK 122
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+E+ Q+G ++ G R+R ++D N+I+D
Sbjct: 123 MVQTLGAFKLPVEVVQYGAENLFRLFEKK----GYRPSFRMRNGKKH--ITDMQNFIIDL 176
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I D ++ EL GV+EHGLFI ++ I+GT +G ++ +K
Sbjct: 177 DLRRIEDTYALAEELDRTVGVVEHGLFIGLISKVIVGTPEGPNIIEKK 224
>gi|16331615|ref|NP_442343.1| ribose-5-phosphate isomerase A [Synechocystis sp. PCC 6803]
gi|6226034|sp|Q55766|RPIA_SYNY3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|1001678|dbj|BAA10413.1| ribose 5-phosphate isomerase [Synechocystis sp. PCC 6803]
Length = 235
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 119/232 (51%), Gaps = 8/232 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
A MK+ + A V +G+GTGST + + D++ G V IP+S E
Sbjct: 7 ANLMKQAVGKAAADRVKSNTIVGLGTGSTTAYALEFIGDRLKKGELENVVGIPTSFQAEV 66
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + IPL + + +D++IDG DE+D + LIKG G A REKI+ A F+V+ D
Sbjct: 67 LARKYGIPLTTLDVADRIDIAIDGADEVDPQKNLIKGGGAAHTREKIVDALAETFLVVVD 126
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
K VD +LP+E+ + + A + G ELR+ +G V+D GN
Sbjct: 127 SGKLVDKLGSTFLLPVEVIPMALTPVMRA----LAKLGGKPELRMGVKKAGPVVTDQGNL 182
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
++D F I +P + + N+PGV+E+GLF+ + D ++G DG+ V +
Sbjct: 183 VIDVKFDAITNPAELEKTINNLPGVLENGLFVGVADVILVGEIIDGQPTVRE 234
>gi|304414795|ref|ZP_07395754.1| ribose-5-phosphate isomerase A [Candidatus Regiella insecticola
LSR1]
gi|304283147|gb|EFL91560.1| ribose-5-phosphate isomerase A [Candidatus Regiella insecticola
LSR1]
Length = 221
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K+ A+ Y+ G +G+GTGST F+ L I + V S +TE
Sbjct: 1 MTQDEQKKAVGWGALAYIEPGSIVGVGTGSTVNHFIDALG-SIKHDITGAVSSSVASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP V + + +DG DE++ ++IKG G AL REKIIA A +FI I D
Sbjct: 60 LTSL-GIPTIDCNAVDELAVYVDGADEVNLHKQMIKGGGAALTREKIIAAVAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G + R ++D GN I
Sbjct: 119 ASKQVDVLGKFPLPVEVIPMARSFIARE----LIKLGGMPKYRQN------VLTDNGNQI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSD 223
+D + I D + ++ +IPGV+ GLF N D ++ +
Sbjct: 169 IDVYNLQIMDAIALENKINSIPGVVTVGLFANRVADIVLMADAS 212
>gi|313624345|gb|EFR94378.1| ribose 5-phosphate isomerase A [Listeria innocua FSL J1-023]
Length = 224
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 7/228 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A +++ DGM +G+GTGST + L + + G + + +S TE +
Sbjct: 3 NQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVQKGINITGVATSIETEQQART 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DEI+ + IKG GGALLREK++A A+S+ I + E K
Sbjct: 63 LGIPLKSLNDVTKIDVTIDGADEINQAFQGIKGGGGALLREKMVAQASSKNIWVVGEKKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIVDA 183
V LG+ LP+E+ FG + L+ E LR+ SG ++ ++ GNYI+D
Sbjct: 123 VTELGKFPLPLEVIPFGWKQIKRMLENDGV------ETTLRKQSSGEIYETNNGNYILDI 176
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P+ +L IPG++EHGLF++ VD I G + GE V++K
Sbjct: 177 INQTFTNPEAWHEKLAGIPGILEHGLFLHYVDIIICGKASGEIEVIKK 224
>gi|158518581|sp|Q3T186|RPIA_BOVIN RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=Phosphoriboisomerase
gi|211829759|gb|AAI02071.2| RPIA protein [Bos taurus]
Length = 264
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ ++ IP+S
Sbjct: 29 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVEQENLKLVCIPTSFQ 88
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 89 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIV 148
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ + + FG ELR+ N +G V+
Sbjct: 149 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRTVTQ---KFGGVIELRMAVNKAGPVVT 205
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 206 DNGNFILDWKFDRVHKWSEVNIAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 262
>gi|319775608|ref|YP_004138096.1| ribose 5-phosphate isomerase A [Haemophilus influenzae F3047]
gi|329122344|ref|ZP_08250931.1| ribose 5-phosphate isomerase [Haemophilus aegyptius ATCC 11116]
gi|317450199|emb|CBY86415.1| ribose 5-phosphate isomerase A [Haemophilus influenzae F3047]
gi|327473626|gb|EGF19045.1| ribose 5-phosphate isomerase [Haemophilus aegyptius ATCC 11116]
Length = 219
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 123/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGVVNNGIFALRGADVVIVGTPEGAKVI 218
>gi|296157638|ref|ZP_06840472.1| ribose 5-phosphate isomerase [Burkholderia sp. Ch1-1]
gi|295891884|gb|EFG71668.1| ribose 5-phosphate isomerase [Burkholderia sp. Ch1-1]
Length = 231
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV +G +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDELKQLVGQAAADYVNANVPEGSVIGVGTGSTANCFIDALAA--DKTRYRGAVSSSL 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H + ++ + + +DG DEID +IKG GGAL REKI+A + F+
Sbjct: 59 ATTARLQSHGFKVLDLNEIDLLPVYVDGADEIDHSGAMIKGGGGALTREKIVASVSDVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ LG LPIE+ + G +R+ + G F++D
Sbjct: 119 CIADASKLVETLGNFPLPIEVVPMARTSIGRR----VTALGGVPVVRVTKEGV-PFITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I DP+ + + PGV+ GLF + + ++GT G +
Sbjct: 174 GNEIIDVKGLRISDPRTLETHINAWPGVVTVGLFASRGANLCLLGTDTGVETI 226
>gi|78779966|ref|YP_398078.1| ribose-5-phosphate isomerase [Prochlorococcus marinus str. MIT
9312]
gi|123553748|sp|Q318Q3|RPIA_PROM9 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|78713465|gb|ABB50642.1| ribose-5-phosphate isomerase [Prochlorococcus marinus str. MIT
9312]
Length = 237
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 123/233 (52%), Gaps = 9/233 (3%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRN 57
M+ QMK+ A AI+ V M LG+G+GSTA + LAD I +G ++ + +S
Sbjct: 1 MNSQTQMKQIVAEAAIEEVKSDMILGLGSGSTAVLMIKSLADAIRSGKLQNIKGVATSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+E IPL VS +DL+IDG DE+D +LIKG G +REK++A A++ ++
Sbjct: 61 SEVLALELDIPLIDLASVSQIDLAIDGADEVDPGFQLIKGGGACHVREKLVASKANQLLI 120
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ DE+K V LP+E+ + + E LR+ +G V+D
Sbjct: 121 VVDETKLVRKLNQSFPLPVEVLPNAWKQVQEVISE----MNGISTLRMATKKAGPVVTDQ 176
Query: 177 GNYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
GN I+D F I +P+ I + NIPGV+E+GLFI++ D ++G + V
Sbjct: 177 GNLILDVLFNDGIKNPKDIEKSINNIPGVLENGLFIDLTDKVLVGKIENNIPV 229
>gi|289434245|ref|YP_003464117.1| ribose 5-phosphate isomerase A [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170489|emb|CBH27029.1| ribose 5-phosphate isomerase A [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 224
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A ++V DGM +G+GTGST + L + + G ++ + +S T +
Sbjct: 3 NQKKIAGEKACEWVEDGMVVGLGTGSTVYYTIEKLGELVQQGLKITGVATSEQTARQAEK 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV+ +D++IDG DE++ + IKG GGALLREK++A A+ I + E K
Sbjct: 63 LGIPLKSLNDVAEIDITIDGADEVNGAFQGIKGGGGALLREKMVAEASILNIWVVGEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
VD LG LP+E+ FG + +L++ L + ++ ++ GNYI+D
Sbjct: 123 VDSLGNFPLPLEVIPFGWKQIKRSLEKEGIQTTLRTQ-----QNKEIYQTNNGNYILDII 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P +L +PG++E GLF+N VD I G +DGE +++K
Sbjct: 178 NQTFTNPIKWQEKLAQVPGIVEQGLFLNYVDIIICGKADGEIELIKK 224
>gi|261402292|ref|YP_003246516.1| ribose 5-phosphate isomerase [Methanocaldococcus vulcanius M7]
gi|261369285|gb|ACX72034.1| ribose 5-phosphate isomerase [Methanocaldococcus vulcanius M7]
Length = 226
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 124/234 (52%), Gaps = 11/234 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M + +K A+ A++ V DGM +G+GTGST+ F+ L ++I V IP+S +
Sbjct: 1 MSSEDLKLKVAKEAVKLVKDGMVIGLGTGSTSALFIRELGNRIKEEELTVFGIPTSFEAK 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IPL S ++ +D++ DG DE+ + L LIKG GG +EKI+ + A F+V+
Sbjct: 61 MLAMQYEIPLVSLDEYD-IDIAFDGADEVEEKTLFLIKGGGGCHTQEKIVDYNAGEFVVL 119
Query: 119 GDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE K V + +P+E+ + AL E G + +RL G ++D G
Sbjct: 120 VDEGKLVKKLGEKFPIPVEVIPLSYRVVMRALSE----MGGDAVIRLGERKRGPVITDNG 175
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N I+D F I D + E+ NIPGV+E+G+F VD ++GT G L+K
Sbjct: 176 NMILDT-FMNIEDAVELEKEINNIPGVVENGIFT-KVDKVLVGTKRG-VKTLKK 226
>gi|319898017|ref|YP_004136214.1| ribose 5-phosphate isomerase a [Haemophilus influenzae F3031]
gi|317433523|emb|CBY81906.1| ribose 5-phosphate isomerase A [Haemophilus influenzae F3031]
Length = 219
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 122/230 (53%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ G++ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGIVTNGIFALRGADVVIVGTPEGAKVI 218
>gi|325980900|ref|YP_004293302.1| ribose 5-phosphate isomerase [Nitrosomonas sp. AL212]
gi|325530419|gb|ADZ25140.1| ribose 5-phosphate isomerase [Nitrosomonas sp. AL212]
Length = 219
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 115/231 (49%), Gaps = 14/231 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + KR AA AIQY+ +G+GTGSTA F+ LA KI + + SS T
Sbjct: 1 MTQDEQKRAAAVAAIQYIPVDCIVGVGTGSTANYFIDELA-KIKHKIE-GAVASSDATAQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H I +H +V + + +DG DEI L +IKG GGAL REKI+A A +FI I D
Sbjct: 59 RLKEHGIEVHDLNNVIDIPVYVDGADEITENLHMIKGGGGALTREKIVAAVAQKFICITD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V+ LG LP+E+ + + G + LR FV+D GN I
Sbjct: 119 QSKLVNILGNFPLPVEVIPMARSYVAREIVH----LGGHPALRHD------FVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I P + L I GV+ +GLF D ++GT D + V+
Sbjct: 169 LDVHGLQIMKPIELETTLNQIAGVVTNGLFARRGADTLLLGT-DNDIRVIS 218
>gi|282165279|ref|YP_003357664.1| ribose-5-phosphate isomerase A [Methanocella paludicola SANAE]
gi|282157593|dbj|BAI62681.1| ribose-5-phosphate isomerase A [Methanocella paludicola SANAE]
Length = 230
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
++NAA +A + V DGM +G+GTGST + L ++ G + +P+S +E
Sbjct: 8 DLARKNAAVKACELVEDGMAVGLGTGSTTAYAIRELGRRVDEGLDIVGVPTSYASEALAI 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL + + +D+ IDG D++DS L +IKG G A +EKI++ ++ F V+ D +K
Sbjct: 68 ECNIPLSTLAECPELDIDIDGADQVDSSLNVIKGGGAAHTKEKIVSCSSKMFAVVIDGNK 127
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
D L RG +PIE+ + +++ + G +R G +SD GN+I+D
Sbjct: 128 LKDVLNRG-VPIEVLPYA----RRLVEKKIAGLGGKCTVRTGSGKDGPTISDNGNFIMDC 182
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
FG I P ++ L IPG++EHG+F N D +G D L++
Sbjct: 183 DFGVINKPAALAEALAQIPGLVEHGIFTN-ADFVYVGYED-RVERLER 228
>gi|253996798|ref|YP_003048862.1| ribose 5-phosphate isomerase [Methylotenera mobilis JLW8]
gi|253983477|gb|ACT48335.1| ribose 5-phosphate isomerase [Methylotenera mobilis JLW8]
Length = 223
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 117/225 (52%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K+ A RA QYV +GM +G+GTGSTA F+ LA G R I SS + +
Sbjct: 1 MNDKQLVALRAAQYVQNGMLVGLGTGSTANYFIEELARLTREQGLRCTTIASSAISAHKA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +P+ + E V+S+DL +DG DEI L+KG G L++EK++A AA++FI + D S
Sbjct: 61 QSLQLPIVALEHVASIDLYVDGADEITPDKTLLKGRGSDLVKEKLLAKAATQFIAVADAS 120
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V +PIE+ F K+ G ELR G +++ G+Y++
Sbjct: 121 KLVSHIGQNFTIPIEVIPFAWQLA----KKNLEALGGVGELRPNAAKDGFWITSHGSYVL 176
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
D F D ++ L N PGV+EHG+F + D +I DG
Sbjct: 177 DMKFDANIDANTLNAMLNNTPGVVEHGIFYQLADTILIA-QDGVV 220
>gi|325267560|ref|ZP_08134212.1| ribose 5-phosphate isomerase A [Kingella denitrificans ATCC 33394]
gi|324980910|gb|EGC16570.1| ribose 5-phosphate isomerase A [Kingella denitrificans ATCC 33394]
Length = 242
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +KR AA +A+++V +G +G+GTGST F+ L + +S +
Sbjct: 22 MTQDDLKRLAAEKAVEFVPEGEYIGIGTGSTINFFIEALGKSGKK--VKGAVTTSDKSRE 79
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP +VS + + IDG DEI+ L++IKG G ALL EKI+A A RFI I D
Sbjct: 80 LMAKYEIPEIHANEVSRLGIYIDGADEINHTLQMIKGGGAALLPEKIVAKLAERFICIAD 139
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V LG+ LPIE+ + G ELR+ + N I
Sbjct: 140 ESKYVARLGKFPLPIEVVPMARSMVARQ----IVLLGGQPELRIG------CKTLHCNEI 189
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D + P + EL I G++E+GLF D I+ G L+
Sbjct: 190 LDVRGLDLSQPLSMERELNKITGLVENGLFAERAADLLILARESGIELI 238
>gi|306833322|ref|ZP_07466450.1| ribose 5-phosphate isomerase A [Streptococcus bovis ATCC 700338]
gi|304424519|gb|EFM27657.1| ribose 5-phosphate isomerase A [Streptococcus bovis ATCC 700338]
Length = 224
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
++K+ A A QYV DGM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 ERLKKIAGVTAAQYVKDGMVVGLGTGSTAYFFVEEIGRRMKEEGLKVVGVTTSSQTTAQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +D+ +D+++DG DE+D+ IKG GGALL EKI+A +I + D+S
Sbjct: 62 EGLGIPLKAVDDIDVIDVTVDGADEVDTNFNGIKGGGGALLMEKIVATPTKEYIWVADDS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ ++ + R FV+D NYI+D
Sbjct: 122 KMVDKLGAFKLPVEVVQYGADRIFREFEKKGY------KPSYRMVNGERFVTDMKNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P + EL + GV+EHGLF MV+ I+ DG ++ K
Sbjct: 176 LDLGVIENPVELGKELKAMVGVVEHGLFNGMVNKVIVAGKDGVNILEAK 224
>gi|225424168|ref|XP_002284079.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 269
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 127/231 (54%), Gaps = 6/231 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A++YV GM LG+GTGSTAK + + + + G + IP+S+ T
Sbjct: 37 TQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKKTH 96
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + +DL+IDG DE+D L L+KG GG+LLREK++ A +FIVI
Sbjct: 97 EQAVSLGIPLSDLDSHPILDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFIVIV 156
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V+ LG +P+EI F T L+ G +LR NG FV+D
Sbjct: 157 DESKLVNHLGGSGLAMPVEIVPFCWKFTAQRLQMFFEESGCVAKLRTYENGE-PFVTDNR 215
Query: 178 NYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NY+VD +F I D ++ S + + GV+EHG+F+ M I+ G +
Sbjct: 216 NYVVDLYFKREIGDLKVASDAILRLAGVVEHGMFLGMATTLIVAGECGVVV 266
>gi|149192412|ref|ZP_01870611.1| ribose-5-phosphate isomerase A [Vibrio shilonii AK1]
gi|148833759|gb|EDL50797.1| ribose-5-phosphate isomerase A [Vibrio shilonii AK1]
Length = 218
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G+GTGST F+ L I + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALKYVEKDSIVGVGTGSTVNHFIDALG-TIKEDIKGAVSSSIASTEK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV+ +D+ +DG DEI+ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 LEAL-GIEVFDCNDVAYLDVYVDGADEINPTRDMIKGGGAALTREKIVAAISDKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R ++D GN I
Sbjct: 119 GTKAVDVLGQFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + + ++ + GV+ GLF + D I GT +G +
Sbjct: 169 LDVHGMQITDAKDMEDKINALAGVVTVGLFAHRGADVIITGTPEGAKI 216
>gi|37958856|gb|AAP51120.1| RbiA [uncultured bacterium]
Length = 223
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN--GFRVQVIPSSRNT 58
M +MK A+ +V G +G+GTGST +F+ L + V + SS +
Sbjct: 1 MTQDEMKTLVGLAALDHVQAGSIVGVGTGSTVDKFIDALGAALKTDPQRVVGAVSSSVRS 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + + E VS + + IDG DEI+ + +IKG G AL REKI+A A RF+ I
Sbjct: 61 TERLQSLGVKVLPAESVSRLAVYIDGADEINHQGDMIKGGGAALTREKIVADLAERFVCI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DE+K V LG+ LP+E+ + + A + G +R V+D GN
Sbjct: 121 ADETKLVQTLGKFPLPVEVIPMAAAQVIRAF----AAQGGQARVREG------VVTDNGN 170
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
IVD I DP + ++ PGV+ G+F N ++GT +G +
Sbjct: 171 LIVDVTGLSITDPARLESDVNQWPGVVTVGIFARNRASVCLLGTPNGVKTL 221
>gi|326317564|ref|YP_004235236.1| ribose 5-phosphate isomerase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374400|gb|ADX46669.1| ribose 5-phosphate isomerase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 230
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 112/228 (49%), Gaps = 8/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A++YVV G +G+GTGST +F+ L + + R V S +T+
Sbjct: 8 SQDELKALVGQAALKYVVPGDIIGVGTGSTVNQFIQALGP-MKDKIRGAVSSSEASTQRL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ +V S+ + IDG DEID R ++KG G AL REKI+A A +F+ I D
Sbjct: 67 RAL-GIPVFDANEVESLSVYIDGADEIDPRGHMVKGGGAALTREKIVAALARQFVCIADA 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V+ LGR LP+E+ + + G LR R V+D +I+
Sbjct: 126 SKLVETLGRFPLPVEVIPMAAQQITRRF----AARGGQAVLR-RGADGQPLVTDNQQHIL 180
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
D I DP E+ PGV+ G+F + A+IG +G V
Sbjct: 181 DVTGLSIQDPLAFESEVNQWPGVVTVGVFAHQKAHVALIGAPEGVRTV 228
>gi|56476004|ref|YP_157593.1| ribose-5-phosphate isomerase A [Aromatoleum aromaticum EbN1]
gi|67461306|sp|Q5P7L9|RPIA_AZOSE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|56312047|emb|CAI06692.1| Ribose 5-phosphate isomerase A [Aromatoleum aromaticum EbN1]
Length = 220
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 112/226 (49%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA A+ YV +GM +G+GTGST F+ LA G + SS +
Sbjct: 1 MTQDELKKAAAIAALDYVENGMIVGVGTGSTVNHFIDGLA--GIKGRIAGAVSSSEASAR 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H IP+ D++ + + +DG DEID +IKG GGAL REKI+A A RFI I D
Sbjct: 59 RLQAHGIPVLDLNDITDLPVYVDGADEIDGGFCMIKGGGGALTREKIVAAVARRFICICD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V LGR LP+EI G ELR FV+D GN I
Sbjct: 119 ASKKVACLGRFPLPVEIIPMARAYVERE----LVRIGGRPELREG------FVTDNGNLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
VD I P+ + EL I GV+ +GLF D ++ T G
Sbjct: 169 VDVHGLMITSPRALETELNQIVGVVTNGLFARRGADVLLLATLAGV 214
>gi|59801356|ref|YP_208068.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae FA 1090]
gi|194098393|ref|YP_002001451.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae NCCP11945]
gi|239998797|ref|ZP_04718721.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae 35/02]
gi|240014287|ref|ZP_04721200.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae DGI18]
gi|240016722|ref|ZP_04723262.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae FA6140]
gi|240080915|ref|ZP_04725458.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae FA19]
gi|240112726|ref|ZP_04727216.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae MS11]
gi|240115474|ref|ZP_04729536.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID18]
gi|240121850|ref|ZP_04734812.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID24-1]
gi|240125573|ref|ZP_04738459.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae SK-92-679]
gi|254493584|ref|ZP_05106755.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae 1291]
gi|260440716|ref|ZP_05794532.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae DGI2]
gi|268594643|ref|ZP_06128810.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae 35/02]
gi|268597031|ref|ZP_06131198.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae FA19]
gi|268598791|ref|ZP_06132958.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae MS11]
gi|268601150|ref|ZP_06135317.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID18]
gi|268684162|ref|ZP_06151024.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae SK-92-679]
gi|291044025|ref|ZP_06569741.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae DGI2]
gi|293399217|ref|ZP_06643382.1| ribose 5-phosphate isomerase A [Neisseria gonorrhoeae F62]
gi|67461228|sp|Q5F831|RPIA_NEIG1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238690192|sp|B4RL16|RPIA_NEIG2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|59718251|gb|AAW89656.1| putative ribose 5-phosphate isomerase [Neisseria gonorrhoeae FA
1090]
gi|193933683|gb|ACF29507.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae NCCP11945]
gi|226512624|gb|EEH61969.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae 1291]
gi|268548032|gb|EEZ43450.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae 35/02]
gi|268550819|gb|EEZ45838.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae FA19]
gi|268582922|gb|EEZ47598.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae MS11]
gi|268585281|gb|EEZ49957.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID18]
gi|268624446|gb|EEZ56846.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae SK-92-679]
gi|291012488|gb|EFE04477.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae DGI2]
gi|291610631|gb|EFF39741.1| ribose 5-phosphate isomerase A [Neisseria gonorrhoeae F62]
gi|317164088|gb|ADV07629.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae TCDC-NG08107]
Length = 223
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSGEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E V S + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVE----AVESARSLVSRKLLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|261492885|ref|ZP_05989431.1| ribose-5-phosphate isomerase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496765|ref|ZP_05993140.1| ribose-5-phosphate isomerase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261307604|gb|EEY08932.1| ribose-5-phosphate isomerase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311426|gb|EEY12583.1| ribose-5-phosphate isomerase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 219
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +MK+ AA+ A+++V +G+G+GST F+ LA + +S+ +E
Sbjct: 1 MDQQEMKKIAAQAALKFVKSDTIVGVGSGSTVNCFIDALASM--KDEIKGAVAASKASEQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S +V+ +D+ IDG DEI + +IKG G AL REKI++ A +FI I D
Sbjct: 59 RLRDIGIEVFSANEVTELDVYIDGADEITPQGAMIKGGGAALTREKIVSSLAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 KSKQVDVLGSTFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT +G ++
Sbjct: 169 ILDVHNFKIMEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAVIL 218
>gi|312373936|gb|EFR21601.1| hypothetical protein AND_16786 [Anopheles darlingi]
Length = 300
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 122/234 (52%), Gaps = 10/234 (4%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M KR+AA +A+ YV D +G+G+GST ++ +A+++ G ++ IP+S
Sbjct: 66 MSLEAAKRSAAYKAVDEYVKDDTVVGIGSGSTVVYAVLRIAERVKAEGLQLVCIPTSFQA 125
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + L E +D +IDG DE+D+++ LIKG GG LL+EKI+A A RF+VI
Sbjct: 126 RQLIIENGLVLGDLESNPQLDCAIDGADEVDAQMVLIKGGGGCLLQEKIVASCADRFVVI 185
Query: 119 GDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D +K +PIE+ + + FG + +LR+ +G V+D
Sbjct: 186 ADYTKDSTRLGQQYDKGIPIEVVPMAYVPIR---DRIGASFGGSLKLRMAIAKAGPVVTD 242
Query: 176 GGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GN+I+D F D ++ E+ IPGV+E GLF+ M + A G +DG
Sbjct: 243 NGNFILDWHFEDDKDHDWDAVNREIMMIPGVVETGLFVGMANKAYFGQADGSVT 296
>gi|223932520|ref|ZP_03624521.1| ribose 5-phosphate isomerase [Streptococcus suis 89/1591]
gi|223898791|gb|EEF65151.1| ribose 5-phosphate isomerase [Streptococcus suis 89/1591]
Length = 224
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+K +A ++V DGM +G+GTGSTA F+ + ++A G ++ + +S T
Sbjct: 3 NLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVQEIGRRVAEEGLQITGVTTSHATAEHAA 62
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + ++V VDL++DG DE+D IKG G ALL EK++A + I I DESK
Sbjct: 63 SLGIPLKNIDEVEYVDLTVDGADEVDGDFNGIKGGGAALLMEKVVAVNSKDCIWIVDESK 122
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+E+ Q+G ++ G R+R ++D N+I+D
Sbjct: 123 VVQTLGAFKLPVEVVQYGAENLFRLFEKK----GYRPSFRMR--NGEKHITDMQNFIIDL 176
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I D ++ EL GV+EHGLFI ++ I+GT +G ++ +K
Sbjct: 177 DLRRIEDTYALAEELDRTVGVVEHGLFIGLISKVIVGTPEGPNIIEKK 224
>gi|188581506|ref|YP_001924951.1| ribose 5-phosphate isomerase [Methylobacterium populi BJ001]
gi|238692869|sp|B1Z896|RPIA_METPB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|179345004|gb|ACB80416.1| ribose 5-phosphate isomerase [Methylobacterium populi BJ001]
Length = 236
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 1/213 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A +KR AA RAI V DGM LG+GTGSTA F+ LL +++ G V +P+S T
Sbjct: 1 MSAPDLKRAAAERAIPLVEDGMRLGIGTGSTAAAFIALLGERVRAGLTVTGVPTSEATRI 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ IPL + E++ +DL+IDG DE+D LRLIKG G ALLREKI+A A+ R +VI D
Sbjct: 61 ACEREGIPLATLEELPELDLTIDGADEVDGNLRLIKGGGAALLREKIVAAASRRMVVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SKRV+ LG LP+E++ FG+ T A++ + G E+ R + +G ++DGG+
Sbjct: 121 ASKRVETLGAFPLPVEVNLFGIGATTRAVEAAVAAAGCIGEIVRRLDKAGQPVLTDGGHA 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
++D G IPDP+ +S L +PGV+EHGLF+
Sbjct: 181 LLDLRLGRIPDPEALSARLWAVPGVVEHGLFLG 213
>gi|320450855|ref|YP_004202951.1| ribose 5-phosphate isomerase A [Thermus scotoductus SA-01]
gi|320151024|gb|ADW22402.1| ribose 5-phosphate isomerase A [Thermus scotoductus SA-01]
Length = 227
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 131/225 (58%), Gaps = 9/225 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKI 64
K+ AA A+ +V DGM +G+GTGSTA+ ++ LA ++ G V+ +P+S T++
Sbjct: 9 KKEAAHAAVAFVQDGMVVGLGTGSTARYAVLELARRLQEGELRGVKGVPTSEATKDLALR 68
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL VDL+IDG DEI L LIKG GGALLREKI+ A FIVI D +K+
Sbjct: 69 EGIPLVDLPP-EGVDLAIDGADEIAPDLSLIKGLGGALLREKIVESNAKEFIVIADHTKK 127
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LGRG++P+EI FG TL A++ G E LR NG ++ +DGG+ I D
Sbjct: 128 VSVLGRGVVPVEIVPFGHLATLRAIR----ALGGEPE--LRMNGDEVYWTDGGHLIADVR 181
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FG I DP + L IPGV+E G+F+ + A++ G +L
Sbjct: 182 FGPIGDPLGLHKALLEIPGVVETGIFVGLATRALVAGPMGVEEIL 226
>gi|198282915|ref|YP_002219236.1| ribose 5-phosphate isomerase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667168|ref|YP_002425118.1| ribose 5-phosphate isomerase A [Acidithiobacillus ferrooxidans ATCC
23270]
gi|254808697|sp|B7J5S6|RPIA_ACIF2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808698|sp|B5ENJ5|RPIA_ACIF5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|198247436|gb|ACH83029.1| ribose 5-phosphate isomerase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519381|gb|ACK79967.1| ribose 5-phosphate isomerase A [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 219
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ +K+ AA A++Y+ GM +G+GTGST F+ L A + SS TEN
Sbjct: 1 MNTDALKKMAAEAALRYIQPGMVVGVGTGSTTNFFIEALGA--AKIHVDGYVASSIATEN 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + + + + IDG DE D RLIKG GGAL REKI+A AA F+ I D
Sbjct: 59 RLKAQGLNVLELNATGDIPVYIDGADEADPHFRLIKGGGGALTREKIVASAARLFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK LG+ LP+E+ F + G + LR +D GN I
Sbjct: 119 DSKDRPMLGKFPLPVEVIPFARSFVARQ----LVKIGGSPTLRSG------ITTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECL 227
+D DP + + IPGV+++G+F D + G++ G
Sbjct: 169 LDVTGLDFSDPLRMEETINAIPGVLDNGIFAHRRADVMLFGSAGGVIE 216
>gi|220924537|ref|YP_002499839.1| ribose 5-phosphate isomerase [Methylobacterium nodulans ORS 2060]
gi|219949144|gb|ACL59536.1| ribose 5-phosphate isomerase [Methylobacterium nodulans ORS 2060]
Length = 235
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 139/231 (60%), Gaps = 3/231 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A +KR AA RA+ V DGM LG+GTGSTA +F+ LL ++ +G V +P+S T
Sbjct: 1 MSAD-LKRAAAARAVDLVQDGMRLGIGTGSTAAQFVELLGARVRSGLSVVGVPTSEATHR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + ++ +DL++DG DEID LRLIKG GGALLREKI+A A+ R +VI D
Sbjct: 60 AAAAAGIPLTTLDETPELDLTVDGADEIDGSLRLIKGGGGALLREKIVAAASRRMVVIAD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS-GLFVSDGGNY 179
SK+V LGR LPIE+ FG+ T A+ + G EL LR F +DG +
Sbjct: 120 GSKQVATLGRFPLPIEVVPFGLGATRRAIAAALTRTGCAGELTLRTGRDFAPFRTDGAHL 179
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD-GECLVL 229
I+DA G IPDP ++ L +PGV+EHGLF+ + AI+ + G +L
Sbjct: 180 ILDAHLGRIPDPDALAAALAAVPGVVEHGLFLGLCTGAILAAEEAGAIRLL 230
>gi|836674|gb|AAC42060.1| ribose 5-phosphate isomerase [Mus musculus]
gi|148666509|gb|EDK98925.1| ribose 5-phosphate isomerase A [Mus musculus]
Length = 236
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A+ A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 1 MSKAEEAKKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 61 ARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIV 120
Query: 118 IGDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K L +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 121 IADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVAQ---KFGGEVELRMAVNKAGPVVT 177
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + PGV++ GLFINM + G DG V +K
Sbjct: 178 DNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 234
>gi|295398545|ref|ZP_06808578.1| ribose 5-phosphate isomerase A [Aerococcus viridans ATCC 11563]
gi|294973209|gb|EFG49003.1| ribose 5-phosphate isomerase A [Aerococcus viridans ATCC 11563]
Length = 224
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 7/225 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIH 65
K A QYV DGM +G+GTGSTA + L ++ G +P+S +
Sbjct: 5 KELVGVAAAQYVKDGMVVGLGTGSTAYYLITELGRRMKEEGLTFTGVPTSIQSAELATSL 64
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+IP+ S DV ++DL+IDG DE D +L IKG GGA L EKIIA + R I I D SK+V
Sbjct: 65 NIPIASLNDVPAIDLTIDGTDEFDPQLNGIKGGGGAHLIEKIIAVNSKRVIWICDHSKQV 124
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
D LG LPIE+ A ++ RL +G+ FV+D GN+I+D
Sbjct: 125 DQLGAFPLPIEVIPAASQHLFYAFEDK----NYAPTFRLSLDGTK-FVTDSGNFIIDLHL 179
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I D ++ EL + GV+EHGLF+ + D ++ DG+ +
Sbjct: 180 EKIVDAVKLADELIQMVGVVEHGLFLGIADKVLMAY-DGQVVEFN 223
>gi|74209421|dbj|BAE23281.1| unnamed protein product [Mus musculus]
Length = 236
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A+ A+ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 1 MSKAEEAKKLASHTAVDNHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 61 ARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIV 120
Query: 118 IGDESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K L +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 121 IADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVAQ---KFGGEVELRMAVNKAGPVVT 177
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + PGV++ GLFINM + G DG V +K
Sbjct: 178 DNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 234
>gi|66540754|ref|XP_623160.1| PREDICTED: ribose-5-phosphate isomerase [Apis mellifera]
Length = 237
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENF 61
K+ AA +A+ YV + +G+G+GST + L +++ V +P+S
Sbjct: 8 ESAKQIAAYKAVDEYVKNNSIIGIGSGSTVIYAVHRLVERVKEENLNVICVPTSFQARQL 67
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+H+ L E +D +IDG DE+DS + LIKG GG LL+EKI+A A++ I++ D
Sbjct: 68 ILNNHLKLGDLETYPKLDCAIDGADEVDSDMNLIKGGGGCLLQEKIVASCANQLIIVADY 127
Query: 122 SKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+K + +PIE+ L +++ +G ++R+ +G ++D GN
Sbjct: 128 TKNSQKLGEQYKKGIPIEVVPMAYVAILRRIEDN---YGGLVKVRMALAKAGPVITDNGN 184
Query: 179 YIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+I+D F I + I+ E+ IPGV+E GLFI M G DG
Sbjct: 185 FILDWHFPRDISNWDKINIEISMIPGVVETGLFIKMAKKVYFGMPDGSVK 234
>gi|318042323|ref|ZP_07974279.1| ribose-5-phosphate isomerase A [Synechococcus sp. CB0101]
Length = 237
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 129/237 (54%), Gaps = 12/237 (5%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
QMK+ A A + + GM +G+G+GSTA + L K+ +G + + +S E
Sbjct: 5 QDQMKQAVAAAATEQIRSGMVVGLGSGSTAALMIQALGAKLKSGELTDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELGIPLQSLNAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVAVRAERFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ + + LK G + +LR+ +G V+D GN
Sbjct: 125 STKLVDTLNLGFLLPVEVLPGAWRQVQAQLKG----MGGDAQLRMAVKKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD----GECLVLQK 231
++D F G I DP + ++ N+PGV+E+GLF+N+ D ++G + G ++++
Sbjct: 181 VLDVKFAGGITDPVGLERDINNLPGVLENGLFVNITDQVLVGEINDGVAGVRDLVKR 237
>gi|307132678|ref|YP_003884694.1| ribose 5-phosphate isomerase, constitutive [Dickeya dadantii 3937]
gi|306530207|gb|ADN00138.1| ribose 5-phosphate isomerase, constitutive [Dickeya dadantii 3937]
Length = 220
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 112/232 (48%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ LA + + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVRPGTIVGVGTGSTAAHFIDALA-SVKHQIEGAVSSSDASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP+ DV +D+ +DG DEI+ +++IKG G AL REKI+A A +F+ I D
Sbjct: 60 LKSL-GIPVFDCNDVDVLDVYVDGADEINPHMQMIKGGGAALTREKIVAAIARQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LGR LP+E+ G R V+D GN I
Sbjct: 119 ASKQVDVLGRFPLPVEVIPMARAYVARE----LVKLGGQPVYRDG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + D + + + GV+ GLF N D A++GTSDG V K
Sbjct: 169 LDVHNMDLSDAMAMENRINGLAGVVTVGLFANRGADVALVGTSDGVKTVRLK 220
>gi|296876606|ref|ZP_06900656.1| ribose-5-phosphate isomerase [Streptococcus parasanguinis ATCC
15912]
gi|296432425|gb|EFH18222.1| ribose-5-phosphate isomerase [Streptococcus parasanguinis ATCC
15912]
Length = 224
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 130/227 (57%), Gaps = 7/227 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+K +A ++V DGM +G+GTGSTA F+ L +I G ++ + +S T + +
Sbjct: 4 NLKEQVGIKAAEFVKDGMIVGLGTGSTAYYFVAELGRRIKEEGLKITAVTTSSVTYDQAE 63
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + +DV VD+++DG DE+D +L IKG GGALL EKI+A + I I DESK
Sbjct: 64 SLDIPLKAIDDVEVVDVTVDGADEVDPQLNGIKGGGGALLMEKIVATNSKDCIWIVDESK 123
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+V LG LP+E+ Q+G ++ G + RL F++D GN+I+D
Sbjct: 124 QVATLGAFKLPVEVVQYGAENLFRHFEQK----GYHPAFRLA--DDQRFITDQGNFIIDL 177
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I D + ++ EL + GV+EHGLF+NM+ I+GT DG ++ +
Sbjct: 178 DLKVIKDAEALANELDHTVGVVEHGLFLNMISKVIVGTPDGPVIIEK 224
>gi|159904152|ref|YP_001551496.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9211]
gi|238687116|sp|A9BCI0|RPIA_PROM4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|159889328|gb|ABX09542.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. MIT
9211]
Length = 237
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 8/222 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
QMK A+ AI+ + DGM LG+G+GSTA + L KI++G + + +S E
Sbjct: 5 QTQMKEAVAKAAIEQIHDGMVLGLGSGSTAALMIKALGAKISSGHLKDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL VS +DL+IDG DE+DS +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LATELGIPLQGLSAVSQIDLAIDGADEVDSNFQLIKGGGACHVQEKLVASLAERFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK V L LP+E+ + + E G +LR+ + +G V+D GN
Sbjct: 125 SSKIVKTLNLTFKLPVEVLPSAWQLVKNKIHE----IGGVSQLRMAQKKAGPIVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
++D F G I DPQ + ++ NIPGV+E+GLF+N+ D ++G
Sbjct: 181 VLDVTFAGGINDPQTLEKQINNIPGVLENGLFVNLADEVLVG 222
>gi|240117768|ref|ZP_04731830.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID1]
gi|240123324|ref|ZP_04736280.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID332]
gi|240128026|ref|ZP_04740687.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae SK-93-1035]
gi|268603468|ref|ZP_06137635.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID1]
gi|268681948|ref|ZP_06148810.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID332]
gi|268686416|ref|ZP_06153278.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae SK-93-1035]
gi|268587599|gb|EEZ52275.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID1]
gi|268622232|gb|EEZ54632.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae PID332]
gi|268626700|gb|EEZ59100.1| ribose-5-phosphate isomerase A [Neisseria gonorrhoeae SK-93-1035]
Length = 223
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA + +++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKTVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSGEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S +VS + + IDG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHLNEKIVASASEKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVVESARSLVSRK----LLAMGGQPELRIG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I P + E+ I GV+E+G+F + D I+GT +G ++
Sbjct: 171 DVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI 218
>gi|239815147|ref|YP_002944057.1| ribose-5-phosphate isomerase A [Variovorax paradoxus S110]
gi|239801724|gb|ACS18791.1| ribose 5-phosphate isomerase [Variovorax paradoxus S110]
Length = 243
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K R A+ YV G +G+GTGST +F+ LA I + + V S +TE
Sbjct: 21 TQDELKAQVGRAALAYVAKGEIVGVGTGSTVNKFIDALA-TIKDQIKGAVSSSVASTERL 79
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ +V + + IDG DEID R ++KG G AL REKI+A + RF+ I D
Sbjct: 80 RAL-GIPVFDSNEVDELGVYIDGADEIDPRGFMVKGGGAALTREKIVAAQSRRFVCIADA 138
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK VD LG LP+E+ + + + G ++ R V+D G +IV
Sbjct: 139 SKLVDTLGAFPLPVEVIPMAARRVMRQFE----AMGGIAQV--REKDGLPLVTDNGQHIV 192
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECL 227
D I DP E+ PGV+ G+F + D ++GT G
Sbjct: 193 DVTGLRISDPLAFESEVSQWPGVVTVGVFAHQKADVCLLGTPAGVRT 239
>gi|307188435|gb|EFN73192.1| Ribose-5-phosphate isomerase [Camponotus floridanus]
Length = 240
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 9/230 (3%)
Query: 4 LQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENF 61
K+ AA +A+ +YV + +G+G+GST + LA+++ G V +P+S
Sbjct: 5 ESAKKIAAHKAVNEYVQNNTVIGIGSGSTVIYAIQRLAERVKEEGLNVVCVPTSFQARQL 64
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+H+ L E +D +IDG DE+D+ L LIKG GG LL+EKI+A A +F+VI D
Sbjct: 65 ILDNHLTLGDLETHPKLDCTIDGADEVDAELNLIKGGGGCLLQEKIVASCAQQFVVIADY 124
Query: 122 SKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+K + +PIE+ ++ +G + ++R+ G ++D GN
Sbjct: 125 TKNSQKLGEQYKKGIPIEVIPMAYVPIQDRIER---IYGGSAKIRMALAKVGPVITDNGN 181
Query: 179 YIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+++D F I + ++ E+ IPGVIE GLFINM + A G DG
Sbjct: 182 FLLDWHFPQDITNWVKVNQEISLIPGVIETGLFINMAEKAFFGMPDGSVK 231
>gi|319638366|ref|ZP_07993128.1| ribose-5-phosphate isomerase A [Neisseria mucosa C102]
gi|317400115|gb|EFV80774.1| ribose-5-phosphate isomerase A [Neisseria mucosa C102]
Length = 223
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AA +A+++V + +G+GTGST F+ L + +S+ +
Sbjct: 3 TQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKK--IKGAVSTSKKSSEL 60
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP S DV + + +DG DE++ L++IKG GGA L EKI+A A+ +F+ I DE
Sbjct: 61 LAKYEIPEVSLNDVMGLAVYVDGADEVNHALQMIKGGGGAHLNEKIVASASDKFVCIADE 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + G ELR+ + + GN IV
Sbjct: 121 SKYVSRLGKFPLPVEVFENARSLVSRK----LLAMGGQPELRVG------YTTFYGNQIV 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
D I + E+ I GV+E+G+F + D ++GT++G ++L
Sbjct: 171 DVHGLNIDQALKMEDEINKIIGVVENGIFARDAADVLVLGTAEGAKVIL 219
>gi|171317517|ref|ZP_02906707.1| ribose 5-phosphate isomerase [Burkholderia ambifaria MEX-5]
gi|171097346|gb|EDT42191.1| ribose 5-phosphate isomerase [Burkholderia ambifaria MEX-5]
Length = 230
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 116/234 (49%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + +V S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ N +++D
Sbjct: 119 CIADGSKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRV-TNDGAPYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEIIDVKGMQIADPRGFEAQINAWPGVVTVGLFAERGANLCLLGTPNGVETIV 227
>gi|256811452|ref|YP_003128821.1| ribose 5-phosphate isomerase [Methanocaldococcus fervens AG86]
gi|256794652|gb|ACV25321.1| ribose 5-phosphate isomerase [Methanocaldococcus fervens AG86]
Length = 226
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 124/234 (52%), Gaps = 11/234 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M +K A+ A++ V DGM +G+GTGSTA F+ L ++I V IP+S +
Sbjct: 1 MSNEDLKLKVAKEAVKLVKDGMVVGLGTGSTAALFIRELGNRIQGEELTVFGIPTSFEAK 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IPL S ++ VD++ DG DE+ + L LIKG GG +EKI+ + A+ F+V+
Sbjct: 61 MLAMQYGIPLVSLDEYD-VDIAFDGADEVEEKTLFLIKGGGGCHTQEKIVDYNANEFVVL 119
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V + +P+E+ + AL E G +RL G ++D G
Sbjct: 120 VDESKLVKNLGEKFPIPVEVIPSAYRVVIRALSE----MGGEAVIRLGERKRGPVITDNG 175
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N I+D F + D + E+ NIPGV+E+G+F VD ++GT G L+K
Sbjct: 176 NMIIDV-FMKVDDAVELEKEINNIPGVVENGIFT-KVDKVLVGTKKG-VKTLKK 226
>gi|156537848|ref|XP_001608093.1| PREDICTED: similar to ribose-5-phosphate isomerase [Nasonia
vitripennis]
Length = 347
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENF 61
K+ AA +A+ YV D +G+G+GST + LA+++ V +P+S
Sbjct: 7 ESAKKIAAYKAVDEYVKDNSVIGIGSGSTIVYAVQRLAERVKEEKLNVVCVPTSFQARQL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+H+ L E +D +IDG DE+D L LIKG GG LL+EKI+A ++I D
Sbjct: 67 IINNHLSLGDLETHPQLDFAIDGADEVDCDLNLIKGGGGCLLQEKIVASCTDTLVIIADY 126
Query: 122 SKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+K + LP+E+ ++E FG + +LR+ +G V+D GN
Sbjct: 127 TKNSQKLGEQYKKGLPLEVVPMAYVPIRRKVEE---DFGGSVKLRMAVAKAGPVVTDNGN 183
Query: 179 YIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+I+D F + D ++ +L +IPG++E GLF+NM G DG
Sbjct: 184 FILDWQFPDNVKDWPAVNQKLLSIPGLVETGLFVNMAKKVFFGMPDGSIK 233
>gi|271502127|ref|YP_003335153.1| ribose 5-phosphate isomerase [Dickeya dadantii Ech586]
gi|270345682|gb|ACZ78447.1| ribose 5-phosphate isomerase [Dickeya dadantii Ech586]
Length = 220
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 112/232 (48%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+ YV G +G+GTGSTA F+ L I + V S +T
Sbjct: 1 MTQDELKKAVGWAALDYVRPGTIVGVGTGSTAAHFIDALG-SIKHQIEGAVSSSDASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP+ DV +D+ +DG DEI+ +++IKG G AL REKI+A A +F+ I D
Sbjct: 60 LKSL-GIPVFDCNDVDVLDVYVDGADEINPHMQMIKGGGAALTREKIVAAIARQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LGR LP+E+ G R ++D GN I
Sbjct: 119 ASKQVDVLGRFPLPVEVIPMARAYVARE----LVKLGGQPVYRDG------VITDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
+D + D + + N+ GV+ GLF N D A++GT+DG V K
Sbjct: 169 LDVHNMDLSDAVAMENCINNLAGVVTVGLFANRGADVALVGTADGVKTVRLK 220
>gi|47216231|emb|CAG01265.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 8/233 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
A + K+ AA A+ +V + +G+G+GST + LA ++ + +P+S
Sbjct: 2 AEEAKKLAAYAAVDNHVQNNQAVGVGSGSTIVYAVDRLAARVRQEKLNIVCVPTSFQARQ 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H + L + +D++IDG DE+D+ L LIKG GG L EKI+A A FIVI D
Sbjct: 62 LILQHSLALSDLDRHPQLDVAIDGADEVDADLTLIKGGGGCLTHEKIVASCAKHFIVIAD 121
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K + +PIE+ + FG LR+ + +G V+D
Sbjct: 122 YRKDSKVLGQQWKKGVPIEVIPMAYVPVCRTIVRR---FGGEAHLRMAVSKAGPVVTDNS 178
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N+++D F + + ++ + IPGV++ GLF++M + A G DG V
Sbjct: 179 NFLLDWKFDGAQNWREVNAAIKMIPGVVDTGLFVDMAERAYFGMEDGSVQVRD 231
>gi|227432210|ref|ZP_03914206.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351983|gb|EEJ42213.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 235
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 122/232 (52%), Gaps = 10/232 (4%)
Query: 1 MDALQ-MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M+ K+ AA A+ Y+ M +G+GTGST F+ +LA A+ + V + +S T
Sbjct: 5 MNEKNFQKKQAALAALNYIQTDMIIGLGTGSTVSYFLDVLA---ASQYNVIGVTTSTITS 61
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
C +IP+ + + +D+++DG DE+DS L IKG G ALL EKI+A + + I I
Sbjct: 62 QRCAELNIPIVDIDAIDHIDVTVDGADEVDSYLNGIKGGGAALLMEKIVAKNSKKNIWIV 121
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D K + LG LP+E+ +G + L GL +LR + ++D G+Y
Sbjct: 122 DRGKVHNTLGSFPLPVEVIPYGSGQLLRQFANK----GLFPKLRRHPGNNQPVITDAGHY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D I +P ++ L + GV+EHGLF+N+ D IIG + ++
Sbjct: 178 IIDCHMTTINNPYALAEYLESQVGVVEHGLFLNICDRIIIGGD--TVEIKER 227
>gi|90412060|ref|ZP_01220067.1| ribose-5-phosphate isomerase A [Photobacterium profundum 3TCK]
gi|90327038|gb|EAS43417.1| ribose-5-phosphate isomerase A [Photobacterium profundum 3TCK]
Length = 219
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV G +G+GTGST F+ L + + V S +TE
Sbjct: 1 MTQDEMKKAAGWAALEYVTKGSIVGVGTGSTVNHFIDAL-ETRKEEIKGAVSSSVASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K+ I + +V+ +D+ +DG DEI++ +IKG G AL REKI+A + +FI I D
Sbjct: 60 LEKL-GITVFDANEVAGLDIYVDGADEINAEYDMIKGGGAALTREKIVAAISDKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K+VD LG+ LP+E+ + G + E R V+D GN I
Sbjct: 119 DTKQVDVLGQFPLPVEVIPMARSFIGRE----LVKLGGDPEYRQG------VVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I D + I ++ +PGV+ GLF D ++G +G
Sbjct: 169 IDVHNMAITDAKDIEKKINALPGVVTVGLFAARGADVLLVGAPEGVRK 216
>gi|225706050|gb|ACO08871.1| Ribose-5-phosphate isomerase [Osmerus mordax]
Length = 235
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 8/233 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
A + K+ A A+ +V + LG+G+GST + LA+++ + +P+S
Sbjct: 2 AEEAKKLAGYAAVDNHVQNNQVLGVGSGSTIVYAVDRLAERVRQEKLNIVCVPTSFQARQ 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H +PL + +D++IDG DE+DS L LIKG GG L +EKI+A A FIVI D
Sbjct: 62 LILQHGLPLSDLDRHPELDVAIDGADEVDSALTLIKGGGGCLAQEKIVAGCAKHFIVIAD 121
Query: 121 ESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K + +PIE+ + + FG LR+ + +G V+D
Sbjct: 122 YRKDSRCLGQQWKKGVPIEVLPVAYVPVSRTIAQR---FGGEAVLRMAVSKAGPVVTDNS 178
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N+I+D F + + ++ + IPGV+E GLF+ M + G DG
Sbjct: 179 NFILDWKFEHAQNWKEVNTAIKMIPGVVETGLFVGMAERVYFGMEDGSVKTRD 231
>gi|312282129|dbj|BAJ33930.1| unnamed protein product [Thellungiella halophila]
Length = 278
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 7/235 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A++ + GM LG+GTGSTA + + +++G + + IP+S+ TE
Sbjct: 46 SQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTE 105
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + + +DL+IDG DE+D L L+KG GGALLREK++ A +FIV+
Sbjct: 106 EQARSLGIPLVALDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVAEKFIVVA 165
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D++K V LG +P+E+ QF N L L+++ FG + +LR+ +G +V+D
Sbjct: 166 DDTKLVKGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCDAKLRVDGDGK-PYVTDNS 224
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYI+D +F + D + E+ GV+EHGLF+ M II +G V+ K
Sbjct: 225 NYIIDLYFKNPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNG-VEVMNK 278
>gi|312867693|ref|ZP_07727899.1| ribose 5-phosphate isomerase A [Streptococcus parasanguinis F0405]
gi|311096756|gb|EFQ54994.1| ribose 5-phosphate isomerase A [Streptococcus parasanguinis F0405]
Length = 223
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+K +A ++V DGM +G+GTGSTA F+ L +I G ++ + +S T + +
Sbjct: 3 NLKEQVGIKAAEFVKDGMIVGLGTGSTAYYFVAELGRRIKEEGLQITAVTTSSVTYDQAE 62
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + +DV VD+++DG DE+D +L IKG GGALL EKI+A + I I DESK
Sbjct: 63 SLGIPLKAIDDVEVVDVTVDGADEVDPQLNGIKGGGGALLMEKIVATNSKDCIWIVDESK 122
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+V LG LP+E+ Q+G ++ G + RL FV+D GN+I+D
Sbjct: 123 QVATLGAFKLPVEVVQYGAENLFRHFEQK----GYHPTFRLA--DDQRFVTDQGNFIIDL 176
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I D ++++ EL + GV+EHGLF+NM+ I+GT DG ++ +
Sbjct: 177 DLKVIEDAEVLANELDHTVGVVEHGLFLNMISKVIVGTPDGPVIIEK 223
>gi|29653390|ref|NP_819082.1| ribose-5-phosphate isomerase A [Coxiella burnetii RSA 493]
gi|153206183|ref|ZP_01945446.1| ribose 5-phosphate isomerase A [Coxiella burnetii 'MSU Goat Q177']
gi|154707277|ref|YP_001423578.1| ribose-5-phosphate isomerase A [Coxiella burnetii Dugway 5J108-111]
gi|161830154|ref|YP_001597788.1| ribose-5-phosphate isomerase A [Coxiella burnetii RSA 331]
gi|165919263|ref|ZP_02219349.1| ribose 5-phosphate isomerase A [Coxiella burnetii RSA 334]
gi|212211940|ref|YP_002302876.1| ribose-5-phosphate isomerase A [Coxiella burnetii CbuG_Q212]
gi|212217886|ref|YP_002304673.1| ribose-5-phosphate isomerase A [Coxiella burnetii CbuK_Q154]
gi|41017704|sp|Q83FB4|RPIA_COXBU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|189043810|sp|A9KBD3|RPIA_COXBN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|189043811|sp|A9NBF7|RPIA_COXBR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238057747|sp|B6J4C4|RPIA_COXB1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238057748|sp|B6J3K5|RPIA_COXB2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|29540652|gb|AAO89596.1| ribose 5-phosphate isomerase [Coxiella burnetii RSA 493]
gi|120577313|gb|EAX33937.1| ribose 5-phosphate isomerase A [Coxiella burnetii 'MSU Goat Q177']
gi|154356563|gb|ABS78025.1| ribose 5-phosphate isomerase [Coxiella burnetii Dugway 5J108-111]
gi|161762021|gb|ABX77663.1| ribose 5-phosphate isomerase A [Coxiella burnetii RSA 331]
gi|165917057|gb|EDR35661.1| ribose 5-phosphate isomerase A [Coxiella burnetii RSA 334]
gi|212010350|gb|ACJ17731.1| ribose 5-phosphate isomerase [Coxiella burnetii CbuG_Q212]
gi|212012148|gb|ACJ19528.1| ribose 5-phosphate isomerase [Coxiella burnetii CbuK_Q154]
Length = 220
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 122/232 (52%), Gaps = 13/232 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA AIQ+V + +G+GTGST F+ LA+ I + + SS TEN
Sbjct: 1 MSKNELKKAAAMEAIQFVKNVNIVGVGTGSTVNYFIDALAE-IKHQIE-GAVASSVATEN 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K H IP+ VS+VD+ +DG DE + L KG GGAL REKIIA AA RFI I D
Sbjct: 59 RLKEHRIPVVDLNSVSNVDVYVDGADEFNKHFYLTKGGGGALTREKIIAAAAKRFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+VD LG+ LPIE+ + + + + R F +D GN I
Sbjct: 119 ESKQVDVLGQFPLPIEVIPMARSFVAREIVK----LKGDPVYRQG------FTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQK 231
+D I +P + L NIPGVI +GLF D +IGT G L +K
Sbjct: 169 LDIHNLTILNPVELEAILNNIPGVIANGLFAQQPADDLLIGTPAGVQLHHRK 220
>gi|88797271|ref|ZP_01112861.1| ribose-5-phosphate isomerase A [Reinekea sp. MED297]
gi|88780140|gb|EAR11325.1| ribose-5-phosphate isomerase A [Reinekea sp. MED297]
Length = 237
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ A+ A+ Y+ +G+GTGSTA+ F+ LA + + SS
Sbjct: 4 MTQDELKQQVAKAALDYIKPELTSDAIIGVGTGSTAEFFIDGLAAYRDDFK--GAVASSD 61
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T H I + DV+ + + +DG DE + +L+LIKG G AL REKI+A A F+
Sbjct: 62 ATAKRLAGHGIEVFDMNDVTQLSVYVDGADEANKKLQLIKGGGAALTREKIVASIAKTFV 121
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V+ LG LP+E+ + +++ G N R V+D
Sbjct: 122 CIADESKAVEVLGAFPLPVEVIPMARSAVARRIRD----LGGNPVYREG------VVTDN 171
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I D + + EL N+ GV+ +GLF D ++GT+ G +
Sbjct: 172 GNVILDVHGLQITDAKELERELNNMVGVVTNGLFAARPADVLLLGTASGVKTL 224
>gi|332524200|ref|ZP_08400426.1| ribose-5-phosphate isomerase A [Rubrivivax benzoatilyticus JA2]
gi|332107535|gb|EGJ08759.1| ribose-5-phosphate isomerase A [Rubrivivax benzoatilyticus JA2]
Length = 220
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K A+ AI++VV G +G+GTGST F+ LA KI + V S ++TE
Sbjct: 1 MTQDELKALVAQAAIEHVVPGALVGVGTGSTVNHFIDALA-KIKDRIAGAVSSSVQSTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + + + +DG DEID +IKG G AL REKI+A A RF+ I D
Sbjct: 60 LRRHGIPVVEAAALDRPLPVYVDGADEIDHHGYMIKGGGAALTREKIVADLAERFVCIAD 119
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK VD LGR LP+E+ + + G LRL +D G I
Sbjct: 120 ESKLVDTLGRFPLPVEVIPMAAPQIARRFE----AMGATATLRLG------VTTDNGQPI 169
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
+D I DP + E+ PGV+ G+F + ++GT++G +
Sbjct: 170 LDVRGLKITDPLAMETEINQWPGVVTVGIFARHKASLCLLGTAEGVRTLR 219
>gi|224283750|ref|ZP_03647072.1| ribose-5-phosphate isomerase A [Bifidobacterium bifidum NCIMB
41171]
Length = 241
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + +GM G+GTGST + + L ++ G + + +SR
Sbjct: 10 MDKAQQDALKKAAGIEAAKLIENGMIAGLGTGSTVRFLVDELGRRVKEEGLQFTGVTTSR 69
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 70 RTQEQAEGYGIKIVDIDDVDHIDITIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV 129
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + LRL +G +D
Sbjct: 130 WIVDESKVVDTIGKFPLPVEVIPFGAGHVIKQFE----AKNYKPVLRLDADGKE-VRTDE 184
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 185 NNFVVDLHLERIDHPQDLAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 232
>gi|53723477|ref|YP_102931.1| ribose-5-phosphate isomerase A [Burkholderia mallei ATCC 23344]
gi|52426900|gb|AAU47493.1| ribose 5-phosphate isomerase [Burkholderia mallei ATCC 23344]
Length = 235
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV + G +G+GTGSTA F+ LA + + +R V S
Sbjct: 5 MTQDELKRLVGEAAARYVTENVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 63
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 64 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDGSGAMIKGGGGALTREKIVASVAETFV 122
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 123 CIADASKRVAVLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGA-PYVTDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 178 GNEILDVKGLRIDDPRALEAAINGWPGVVTVGLFAQRGADLCLLGTERGVETLR 231
>gi|226944309|ref|YP_002799382.1| Ribose 5-phosphate isomerase [Azotobacter vinelandii DJ]
gi|226719236|gb|ACO78407.1| Ribose 5-phosphate isomerase [Azotobacter vinelandii DJ]
Length = 224
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ +++ +G+GTGSTA F+ LLA + + SS
Sbjct: 1 MIQDQLKQAVAQAALDHILPHLTRQSIVGVGTGSTANFFIDLLARHRMD--FDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I +H ++ ++ +DG DE + L L KG GGAL REKI+A A F+
Sbjct: 59 ATAARLRSHGIEVHDLNSIAELEFYVDGADECNGHLELTKGGGGALTREKIVAAVAKTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESKRVDFLG LP+E+ G N R V+D
Sbjct: 119 CIADESKRVDFLGGFPLPVEVIPMARGHVARQ----LVMLGGNPVHREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
GN I+D + I DP+ + ++ I GV+ +GLF D ++GT +G
Sbjct: 169 GNVILDVYDMRIIDPRQLESDINGIVGVVCNGLFAARPADLLLLGTHNGVEK 220
>gi|145632730|ref|ZP_01788464.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 3655]
gi|229844376|ref|ZP_04464516.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 6P18H1]
gi|144986925|gb|EDJ93477.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 3655]
gi|229812625|gb|EEP48314.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 6P18H1]
Length = 219
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + V S +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQGTVAASKE-SEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVSS+D+ +DG DEI+ + +IKG G AL REKI+ A +FI I D
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVTALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ + G E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGAPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ G++ +G+F + D I+GT +G ++
Sbjct: 169 ILDVHNFSILNPVEMEKELNNVAGIVTNGIFALRGADVVIVGTPEGAKVI 218
>gi|310287983|ref|YP_003939242.1| Ribose 5-phosphate isomerase A [Bifidobacterium bifidum S17]
gi|311064856|ref|YP_003971582.1| ribose 5-phosphate isomerase Rpi [Bifidobacterium bifidum PRL2010]
gi|313140906|ref|ZP_07803099.1| ribose-5-phosphate isomerase A [Bifidobacterium bifidum NCIMB
41171]
gi|309251920|gb|ADO53668.1| Ribose 5-phosphate isomerase A [Bifidobacterium bifidum S17]
gi|310867176|gb|ADP36545.1| Rpi Ribose 5-phosphate isomerase [Bifidobacterium bifidum PRL2010]
gi|313133416|gb|EFR51033.1| ribose-5-phosphate isomerase A [Bifidobacterium bifidum NCIMB
41171]
Length = 232
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 9/228 (3%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD +K+ A A + + +GM G+GTGST + + L ++ G + + +SR
Sbjct: 1 MDKAQQDALKKAAGIEAAKLIENGMIAGLGTGSTVRFLVDELGRRVKEEGLQFTGVTTSR 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + + I + +DV +D++IDG DE+D IKG G ALL EKI+A +++ +
Sbjct: 61 RTQEQAEGYGIKIVDIDDVDHIDITIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD +G+ LP+E+ FG + + LRL +G +D
Sbjct: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGHVIKQFE----AKNYKPVLRLDADGKE-VRTDE 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 176 NNFVVDLHLERIDHPQDLAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
>gi|307543609|ref|YP_003896088.1| ribose-5-phosphate isomerase A [Halomonas elongata DSM 2581]
gi|307215633|emb|CBV40903.1| ribose-5-phosphate isomerase A [Halomonas elongata DSM 2581]
Length = 224
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A A+ + + +G+GTGSTA F+ LA G + SS
Sbjct: 1 MTQDELKDAVAAAALDEIRPLLGRNIVIGVGTGSTANRFIDKLATL--RGDFRGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I + + ++ + +DG DE+++ L +IKG G AL REKI+A + RF+
Sbjct: 59 ATAERLRGHGIDVFELNETGTLPVYVDGADEVNAHLHMIKGGGAALTREKIVAACSERFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV+ LG LP+E+ + L ++ + E + V+D
Sbjct: 119 CIADASKRVERLGDFPLPVEVIPMARSYVARELVKLGADPVYREGV----------VTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D + I DP+ + L I GV+ +GLF D ++GT G +
Sbjct: 169 GNQILDCYEFMIDDPESMEARLNAIVGVVTNGLFAARGADVLLLGTDQGVERL 221
>gi|224058933|ref|XP_002299653.1| predicted protein [Populus trichocarpa]
gi|222846911|gb|EEE84458.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 128/241 (53%), Gaps = 12/241 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++KR AA +A++ V GM +G+GTGSTAK + + + + G + IP+S T
Sbjct: 29 TQDELKRIAAYKAVEMVESGMVVGLGTGSTAKHAVDRIGELLHQGKLKNIIGIPTSTKTH 88
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + +D++IDG DEID L L+KG GG+LLREK++ +F+VI
Sbjct: 89 EQALSLGIPLSDLDSHPVLDIAIDGADEIDPNLNLVKGRGGSLLREKMVEGVCKKFVVIV 148
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRL------RRNGSGL 171
DESK V ++G +P+EI F T L+E+ G +LR NG
Sbjct: 149 DESKLVKYIGGSGLAMPVEIVPFCWKFTAKRLQELFEYAGCVAKLRTFASCNGMENGGLP 208
Query: 172 FVSDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
FV+D GNY+VD +F I D + S + + GV+EHG+F++M I+ G +
Sbjct: 209 FVTDNGNYVVDLYFKRDIGDLKAASDAILRLAGVVEHGMFLDMATTVIVAGDLG-VTIKN 267
Query: 231 K 231
K
Sbjct: 268 K 268
>gi|146280799|ref|YP_001170952.1| ribose-5-phosphate isomerase A [Pseudomonas stutzeri A1501]
gi|166229231|sp|A4VGK9|RPIA_PSEU5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|145569004|gb|ABP78110.1| ribose 5-phosphate isomerase [Pseudomonas stutzeri A1501]
gi|327479067|gb|AEA82377.1| ribose-5-phosphate isomerase A [Pseudomonas stutzeri DSM 4166]
Length = 223
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 112/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M Q+K+ A+ A+ +++ +G+GTGSTA F+ LLA GF + SS
Sbjct: 1 MTQDQLKQAVAQAAVDHILPKLNDRSIVGVGTGSTANFFIDLLAKH--KGFFDGAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ VS ++ +DG DE + L LIKG G AL REKI+A A FI
Sbjct: 59 ATAERLKQHGIPVYDLNSVSELEFYVDGADEANKHLELIKGGGAALTREKIVAAVAKTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ LG LP+E+ + G + R V+D
Sbjct: 119 CIADGSKLVEQLGAFPLPVEVIPMARSHVARE----LVKLGGDPVYRDG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
GN I+D I + G++ +I GV+ +GLF D ++GT DG +
Sbjct: 169 GNVILDVHNLMIGFAPELEGKINDIVGVVSNGLFAMRPADLLLLGTQDGVQTL 221
>gi|296110990|ref|YP_003621371.1| ribose-5-phosphate isomerase A [Leuconostoc kimchii IMSNU 11154]
gi|295832521|gb|ADG40402.1| ribose-5-phosphate isomerase A [Leuconostoc kimchii IMSNU 11154]
Length = 227
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
M K A RRA ++V + M +G+G+GST + L +++ ++ + +S T
Sbjct: 1 MSQELQKIIAGRRAAEFVQNDMVVGIGSGSTIAHVIEALGERVTKENLKIVGVATSEKTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+++ +D+ +DL+IDG D+I IKG G ALL EKI+A + + I +
Sbjct: 61 RNAAQLGIPMYNVDDIDKIDLTIDGADQIADDFSAIKGGGAALLWEKIVAFNSRQNIWVV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D +KRV L + LP+E+ +G ++ + G + RL +NG +D N+
Sbjct: 121 DATKRVPKLNQ-YLPVEVIPYGSDQLFKRFQ----ADGFHPTWRLDQNG-NPVRTDSANF 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++D I +P+ + EL + GV+EHGLF ++V+ +IG D VL
Sbjct: 175 LIDLHLPLIENPRELGDELIKMVGVVEHGLFTDVVNRVVIGEDDHTVQVLD 225
>gi|120611127|ref|YP_970805.1| ribose-5-phosphate isomerase A [Acidovorax citrulli AAC00-1]
gi|120589591|gb|ABM33031.1| ribose-5-phosphate isomerase [Acidovorax citrulli AAC00-1]
Length = 230
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A++YVV G +G+GTGST +F+ L + + R V S +T+
Sbjct: 8 SQDELKALVGQAALKYVVPGDIVGVGTGSTVNQFIQALG-SMKDRIRGAVSSSEASTQRL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ +V S+ + IDG DEID R ++KG G AL REKI+A A +F+ I D
Sbjct: 67 RAL-GIPVFDANEVESLSVYIDGADEIDPRGHMVKGGGAALTREKIVAALARQFVCIADV 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V+ LGR LP+E+ + + G LR R V+D YI+
Sbjct: 126 SKLVETLGRFPLPVEVIPMAAQQIARRF----ATRGGQAVLR-RGADGQPLVTDNQQYIL 180
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECL 227
D I DP E+ PGV+ G+F + D A+IG +G
Sbjct: 181 DVKGLSIQDPLAFESEVSQWPGVVTVGVFAHQKADVALIGAPEGVRT 227
>gi|78066161|ref|YP_368930.1| ribose-5-phosphate isomerase A [Burkholderia sp. 383]
gi|123568644|sp|Q39GY0|RPIA_BURS3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|77966906|gb|ABB08286.1| ribose-5-phosphate isomerase [Burkholderia sp. 383]
Length = 231
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 116/234 (49%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + SS
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALA--VVKARYRGAVSSSV 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H I + +V S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 59 ATTERLKSHGIKVFDLNEVDSLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVETIV 227
>gi|330816743|ref|YP_004360448.1| Ribose 5-phosphate isomerase [Burkholderia gladioli BSR3]
gi|327369136|gb|AEA60492.1| Ribose 5-phosphate isomerase [Burkholderia gladioli BSR3]
Length = 231
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA I +R + SS
Sbjct: 1 MTQDELKRLVGQAAADYVLANVPEGSVIGVGTGSTANCFIDALAA-IKTRYR-GAVSSSI 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I + ++ + + +DG DEID+ +IKG GGAL REKI+A + F+
Sbjct: 59 ATTQRLESHGIRVFDLNEIEGLQVYVDGADEIDASGAMIKGGGGALTREKIVASVSETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LP+E+ + G LR+ ++G+ F++D
Sbjct: 119 CIADASKRVATLGAFPLPVEVVPMARTAIGRR----LTALGGVPVLRVTKDGA-PFLTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P+ + + PGV+ GLF D ++G G +
Sbjct: 174 GNEILDVKGLAISEPRALEATINGWPGVVTVGLFAERGADLCLLGGETGVETI 226
>gi|116629220|ref|YP_814392.1| ribose 5-phosphate isomerase [Lactobacillus gasseri ATCC 33323]
gi|238853912|ref|ZP_04644275.1| ribose 5-phosphate isomerase A [Lactobacillus gasseri 202-4]
gi|311111005|ref|ZP_07712402.1| ribose 5-phosphate isomerase A [Lactobacillus gasseri MV-22]
gi|122273782|sp|Q045B8|RPIA_LACGA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|116094802|gb|ABJ59954.1| ribose-5-phosphate isomerase [Lactobacillus gasseri ATCC 33323]
gi|238833498|gb|EEQ25772.1| ribose 5-phosphate isomerase A [Lactobacillus gasseri 202-4]
gi|311066159|gb|EFQ46499.1| ribose 5-phosphate isomerase A [Lactobacillus gasseri MV-22]
Length = 232
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 116/236 (49%), Gaps = 10/236 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA--NGFRVQVIPSS 55
MD Q+K+ AA +A V G LG+GTGST F+ L ++ N ++ +S
Sbjct: 1 MDKSEQDQLKKEAATKAAMMVESGSVLGVGTGSTVAFFIDALGERKEKENFSLKHIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + D+ DL++DG D +D L IKG GGAL EK +A + +
Sbjct: 61 NRSKKQLEGLGFQVDELADIDQADLTVDGADRVDDNLDGIKGGGGALTLEKNVAINSKKV 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I DESK V L LP+E+ + +E GL + RL NG +V+
Sbjct: 121 IWIVDESKLVHHLSGFPLPVEVLPVSAEQNFKRFEEE----GLKPQWRLDDNGK-RYVTH 175
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GNYI+D P P ++ L + GV+EHGLF++M D II SDG ++
Sbjct: 176 YGNYIIDLAADPTPVPHGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKR 231
>gi|153949030|ref|YP_001401655.1| ribose 5-phosphate isomerase A [Yersinia pseudotuberculosis IP
31758]
gi|152960525|gb|ABS47986.1| ribose 5-phosphate isomerase A [Yersinia pseudotuberculosis IP
31758]
Length = 236
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 133/229 (58%), Gaps = 3/229 (1%)
Query: 3 ALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
KR AARR I +V DGMTLG+G+G+T+ F+ L +A G ++ +SR+T
Sbjct: 5 QNDAKRAAARRVIQDFVFDGMTLGLGSGTTSHFFVRELGQHVAKGLQLTCTTTSRSTSEV 64
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I L P +++ +DL+IDG DEID R +IKG G LL EKIIAHA+ R I I DE
Sbjct: 65 ARDVGIELSDPNEMNEIDLTIDGPDEIDRRFNMIKGGGACLLWEKIIAHASKRMICICDE 124
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYI 180
+K V+ LG+ LP+EI F +T ++ V + GL+ +RR G G ++D GN+I
Sbjct: 125 TKIVNCLGQFPLPVEIVPFAWKQTERRVERVLAEQGLHHVPIIRRMGGGHPVITDSGNFI 184
Query: 181 VDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D G I P+ + EL IPGV+E+GLF ++G DG V
Sbjct: 185 LDCHCGAIITAPEPLEIELNRIPGVVENGLFTREATGMVVGYFDGSSYV 233
>gi|254297767|ref|ZP_04965220.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 406e]
gi|157807092|gb|EDO84262.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 406e]
Length = 231
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV + G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGEAAARYVTENVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDGSGAMIKGGGGALTREKIVASVAETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 119 CIADASKRVAVLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGA-PYVTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 174 GNEILDVKGLRIDDPRALEAAINGWPGVVTVGLFAQRGADLCLLGTERGVETLR 227
>gi|260221152|emb|CBA29432.1| Ribose-5-phosphate isomerase A [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 249
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 9/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A+QYVV G +G+GTGST +F+ LA I + + V S +TE
Sbjct: 27 SQDELKTLVGQAALQYVVPGEIVGVGTGSTVNKFIDALA-TIKDQIKGAVSSSVASTERL 85
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + +V + + IDG DEID ++KG G AL REKI+A +++F+ I DE
Sbjct: 86 QAL-GIQVFDSNEVDKLSVYIDGADEIDGAGNMVKGGGAALTREKIVAAQSAKFVCIADE 144
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + ++ + G +RL+ V+D G YIV
Sbjct: 145 SKLVQTLGKFPLPVEVIPMATQRVIAQF----AAKGGKGSIRLKDGK--PLVTDNGQYIV 198
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I DPQ E+ PGV+ G+F ++GT+ G +
Sbjct: 199 DVTGLQITDPQAFEAEVSQWPGVVTVGVFAYQRAQVCLLGTASGVKTL 246
>gi|53719484|ref|YP_108470.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei K96243]
gi|76811971|ref|YP_333370.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 1710b]
gi|121598380|ref|YP_993065.1| ribose-5-phosphate isomerase A [Burkholderia mallei SAVP1]
gi|124385360|ref|YP_001026155.1| ribose-5-phosphate isomerase A [Burkholderia mallei NCTC 10229]
gi|126440799|ref|YP_001058840.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 668]
gi|126449968|ref|YP_001080574.1| ribose-5-phosphate isomerase A [Burkholderia mallei NCTC 10247]
gi|126454328|ref|YP_001066087.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 1106a]
gi|134282334|ref|ZP_01769039.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 305]
gi|167002548|ref|ZP_02268338.1| ribose 5-phosphate isomerase A [Burkholderia mallei PRL-20]
gi|167719757|ref|ZP_02402993.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei DM98]
gi|167738752|ref|ZP_02411526.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 14]
gi|167815976|ref|ZP_02447656.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 91]
gi|167824349|ref|ZP_02455820.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 9]
gi|167845892|ref|ZP_02471400.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei B7210]
gi|167894461|ref|ZP_02481863.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 7894]
gi|167902864|ref|ZP_02490069.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei NCTC
13177]
gi|167911106|ref|ZP_02498197.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei 112]
gi|217423771|ref|ZP_03455272.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 576]
gi|226196439|ref|ZP_03792021.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei Pakistan
9]
gi|237812098|ref|YP_002896549.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei MSHR346]
gi|238563302|ref|ZP_00439090.2| ribose 5-phosphate isomerase A [Burkholderia mallei GB8 horse 4]
gi|242314686|ref|ZP_04813702.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1106b]
gi|254178187|ref|ZP_04884842.1| ribose 5-phosphate isomerase A [Burkholderia mallei ATCC 10399]
gi|254179935|ref|ZP_04886534.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1655]
gi|254188660|ref|ZP_04895171.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei Pasteur
52237]
gi|254197427|ref|ZP_04903849.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei S13]
gi|254199873|ref|ZP_04906239.1| ribose 5-phosphate isomerase A [Burkholderia mallei FMH]
gi|254206201|ref|ZP_04912553.1| ribose 5-phosphate isomerase A [Burkholderia mallei JHU]
gi|254261719|ref|ZP_04952773.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1710a]
gi|254358378|ref|ZP_04974651.1| ribose 5-phosphate isomerase A [Burkholderia mallei 2002721280]
gi|67461360|sp|Q62K38|RPIA_BURMA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|67461364|sp|Q63TU6|RPIA_BURPS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123599268|sp|Q3JST3|RPIA_BURP1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200035|sp|A3MJY8|RPIA_BURM7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200036|sp|A2S2I6|RPIA_BURM9 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200037|sp|A1V4B2|RPIA_BURMS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200038|sp|A3NUR6|RPIA_BURP0 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200039|sp|A3N919|RPIA_BURP6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|52209898|emb|CAH35870.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei K96243]
gi|76581424|gb|ABA50899.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1710b]
gi|121227190|gb|ABM49708.1| ribose 5-phosphate isomerase A [Burkholderia mallei SAVP1]
gi|124293380|gb|ABN02649.1| ribose 5-phosphate isomerase A [Burkholderia mallei NCTC 10229]
gi|126220292|gb|ABN83798.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 668]
gi|126227970|gb|ABN91510.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1106a]
gi|126242838|gb|ABO05931.1| ribose 5-phosphate isomerase A [Burkholderia mallei NCTC 10247]
gi|134246372|gb|EBA46461.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 305]
gi|147749469|gb|EDK56543.1| ribose 5-phosphate isomerase A [Burkholderia mallei FMH]
gi|147753644|gb|EDK60709.1| ribose 5-phosphate isomerase A [Burkholderia mallei JHU]
gi|148027505|gb|EDK85526.1| ribose 5-phosphate isomerase A [Burkholderia mallei 2002721280]
gi|157936339|gb|EDO92009.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei Pasteur
52237]
gi|160699226|gb|EDP89196.1| ribose 5-phosphate isomerase A [Burkholderia mallei ATCC 10399]
gi|169654168|gb|EDS86861.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei S13]
gi|184210475|gb|EDU07518.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1655]
gi|217393629|gb|EEC33650.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 576]
gi|225931656|gb|EEH27661.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei Pakistan
9]
gi|237503518|gb|ACQ95836.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei MSHR346]
gi|238520969|gb|EEP84424.1| ribose 5-phosphate isomerase A [Burkholderia mallei GB8 horse 4]
gi|242137925|gb|EES24327.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1106b]
gi|243061765|gb|EES43951.1| ribose 5-phosphate isomerase A [Burkholderia mallei PRL-20]
gi|254220408|gb|EET09792.1| ribose 5-phosphate isomerase A [Burkholderia pseudomallei 1710a]
Length = 231
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV + G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGEAAARYVTENVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDGSGAMIKGGGGALTREKIVASVAETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 119 CIADASKRVAVLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGA-PYVTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 174 GNEILDVKGLRIDDPRALEAAINGWPGVVTVGLFAQRGADLCLLGTERGVETLR 227
>gi|126664735|ref|ZP_01735719.1| ribose-5-phosphate isomerase A [Marinobacter sp. ELB17]
gi|126631061|gb|EBA01675.1| ribose-5-phosphate isomerase A [Marinobacter sp. ELB17]
Length = 224
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 18/236 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ ++K+ A+ AI Y+ +G+GTGSTA F+ LA I N F + SS
Sbjct: 1 MNQDELKQAVAKSAIDYISPRLNSSSVIGVGTGSTANCFIDFLAA-IRNDFD-GAVASSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ + ++ +DG DE++ +L LIKG GGAL REKI+A A FI
Sbjct: 59 ATAERLKSHGIPVYELNSTADLEFYVDGADEVNEQLELIKGGGGALTREKIVAEVAQTFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK+VD LG LP+E+ + + + G + R F +D
Sbjct: 119 CIADESKKVDILGEFPLPLEVLPMARSHVGREIVK----LGGDPVYRDN------FTTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
GN I+D + + P + L I GV+ +GLF D ++GT G L++
Sbjct: 169 GNIIIDVYNLDLSRPIQVEERLNQIVGVVTNGLFARRPADLLLLGTKTG-VRTLKR 223
>gi|270158539|ref|ZP_06187196.1| ribose 5-phosphate isomerase A [Legionella longbeachae D-4968]
gi|289166629|ref|YP_003456767.1| ribose 5-phosphate isomerase, constitutive [Legionella longbeachae
NSW150]
gi|269990564|gb|EEZ96818.1| ribose 5-phosphate isomerase A [Legionella longbeachae D-4968]
gi|288859802|emb|CBJ13783.1| ribose 5-phosphate isomerase, constitutive [Legionella longbeachae
NSW150]
Length = 216
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 13/225 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+K AA+ A+ ++ D +G+GTGST F+ LA I + + SS+ TE +
Sbjct: 3 DLKIKAAKAALDFIEDDTIVGVGTGSTVNYFIKELA-TIKHKID-ACVASSKATEALLRQ 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IP+ V + + IDG DE+ +IKG GGAL EKI+A A +FI I D+SK+
Sbjct: 61 EGIPVIDLNSVQDLPVYIDGADEVTEHGEMIKGGGGALTGEKIVAQLAQKFICIADDSKQ 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LG + +E+ + G + E R FV+D GN I+D F
Sbjct: 121 VRHLGGFPVAVEVLPMARSMVARE----LVKLGGDPEYREG------FVTDNGNIILDVF 170
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I +P + + I GV+E+G+F + D ++G+ DG +
Sbjct: 171 NFTINEPMDLEERINRITGVVENGIFAHRIADVILLGSQDGVKRL 215
>gi|322392154|ref|ZP_08065616.1| ribose 5-phosphate isomerase [Streptococcus peroris ATCC 700780]
gi|321145054|gb|EFX40453.1| ribose 5-phosphate isomerase [Streptococcus peroris ATCC 700780]
Length = 228
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S +T
Sbjct: 2 ENLKKLAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSSTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +I L S ++V+ VD+++DG DE+D + IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNISLKSIDEVNEVDVTVDGADEVDGQYNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + E+ R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVIQYGAEQVFRRFERAGYKPSFREKAGQR------FVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP EL + GV+EHGLF MVD I+ +G ++ K
Sbjct: 176 LDLKVIEDPIGFGKELDHEVGVVEHGLFNQMVDKVIVAGQNGIQILTSK 224
>gi|307149963|ref|YP_003885347.1| ribose 5-phosphate isomerase [Cyanothece sp. PCC 7822]
gi|306980191|gb|ADN12072.1| ribose 5-phosphate isomerase [Cyanothece sp. PCC 7822]
Length = 237
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A Q V +G+GTGST + + ++I +G + +P+S E +
Sbjct: 11 MKQEVGKAAAQRVKSDSIVGLGTGSTTAYAIQYIGERIQSGELKNIVGVPTSFQAEVLAR 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + + +DL+IDG DE+D + LIKG G A REKI+ A +FIV+ D K
Sbjct: 71 KYGVPLTTLDVIDHMDLAIDGADEVDPQKNLIKGGGAAHTREKIVDSLADQFIVVVDGGK 130
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ V+ + A+++ G ELR+ +G V+D GN ++D
Sbjct: 131 LVDHLGSTFLLPVEVIPMAVSPVIKAIEK----LGGKPELRMGVKKAGPVVTDQGNLVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + L NIPGV+E+GLF+ + D ++G +G+ +V +
Sbjct: 187 VKFDKIEDPANLEKTLNNIPGVLENGLFVGVADIILVGEIIEGKPVVRE 235
>gi|332289358|ref|YP_004420210.1| ribose-5-phosphate isomerase A [Gallibacterium anatis UMN179]
gi|330432254|gb|AEC17313.1| ribose-5-phosphate isomerase A [Gallibacterium anatis UMN179]
Length = 219
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L MK+ AA A+QYV +G+G+GST F+ L I + + + +S+N+E
Sbjct: 1 MDQLTMKKMAANAALQYVQADTIVGVGSGSTVNCFIEALG-TIKHKIK-GAVAASKNSEA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S DVS +D+ +DG DEI +IKG G AL REKI+A A FI I D
Sbjct: 59 LLRAQGIEVFSANDVSGLDIYVDGADEITPHKMMIKGGGAALTREKIVAALAKTFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G + E R V+D GN
Sbjct: 119 RSKQVDVLGSTFPLPVEVIPMARSQVARK----LVALGGSPEYREG------VVTDNGNI 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+G+ DG ++
Sbjct: 169 ILDVHNFKILNPVEMEKELNNVAGVVTNGIFALRPADIVIVGSPDGAQIL 218
>gi|51247841|pdb|1UJ4|A Chain A, Crystal Structure Of Thermus Thermophilus Ribose-5-
Phosphate Isomerase
gi|51247843|pdb|1UJ6|A Chain A, Crystal Structure Of Thermus Thermophilus Ribose-5-
Phosphate Isomerase Complexed With Arabinose-5-Phosphate
Length = 227
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 99/225 (44%), Positives = 127/225 (56%), Gaps = 9/225 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKI 64
K+ AA AI YV DG +G+GTGSTA+ ++ LA ++ G V +P+SR TE K
Sbjct: 9 KKEAAHAAIAYVQDGXVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAKR 68
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL VDL+IDG DEI L LIKG GGALLREKI+ A FIVI D +K+
Sbjct: 69 EGIPLVDLPP-EGVDLAIDGADEIAPGLALIKGXGGALLREKIVERVAKEFIVIADHTKK 127
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V LGRG +P+EI FG TL A+ + L E LR +G + +DGG+ I D
Sbjct: 128 VPVLGRGPVPVEIVPFGYRATLKAIAD------LGGEPELRXDGDEFYFTDGGHLIADCR 181
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FG I DP + L IPGV+E GLF+ A++ G +L
Sbjct: 182 FGPIGDPLGLHRALLEIPGVVETGLFVGXATRALVAGPFGVEELL 226
>gi|313633996|gb|EFS00687.1| ribose 5-phosphate isomerase A [Listeria seeligeri FSL N1-067]
Length = 224
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 5/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A ++V GM +G+GTGST + L + + G ++ + +S T +
Sbjct: 3 NQKKIAGEKACEWVEYGMVVGLGTGSTVYYTIEKLGELVQQGLKITGVATSEQTARQAEK 62
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S DV +D++IDG DE+ + IKG GGALLREK++A A+ I + E K
Sbjct: 63 LGIPLKSLNDVVEIDITIDGADEVTGAFQGIKGGGGALLREKMVAEASRLNIWVVGEEKL 122
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
VD LG LP+E+ FG + +L++ L + ++ ++ GNYI+D
Sbjct: 123 VDSLGNFPLPLEVIPFGWKQIKRSLEKEGIQATLRTQ-----QNKEIYQTNNGNYILDIV 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P +L +PG++E GLF+N VD I G +DGE +++K
Sbjct: 178 NQTFTNPIKWQEKLAQVPGIVEQGLFLNYVDIIICGKADGEIELIKK 224
>gi|167836765|ref|ZP_02463648.1| ribose-5-phosphate isomerase A [Burkholderia thailandensis MSMB43]
Length = 231
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV D G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 119 CIADASKRVAVLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGA-PYVTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 174 GNEILDVKGLRIDDPRALEATVNGWPGVVTVGLFAQRGADLCLLGTEHGVETLR 227
>gi|258543864|ref|ZP_05704098.1| ribose 5-phosphate isomerase [Cardiobacterium hominis ATCC 15826]
gi|258520904|gb|EEV89763.1| ribose 5-phosphate isomerase [Cardiobacterium hominis ATCC 15826]
Length = 211
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 13/219 (5%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
AA+ A+ Y+ DG+TLG+G+GST F+ L + + +S + +
Sbjct: 2 LAAKAALHYIEDGITLGVGSGSTVNCFIEALGAAKMQFADI--VTASDESTRRLEALGYR 59
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL 128
+ V +D+ +DG DEI+ +IKG G AL REKI+A +++F+ I DESK+V L
Sbjct: 60 VSDLNSVGRIDVYVDGCDEINPHKAMIKGGGAALTREKIVAACSAKFVCIVDESKQVPVL 119
Query: 129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFI 188
GR LP+E+ + L + L E R R N V+D GN+I+D + I
Sbjct: 120 GRFPLPVEVIPMARSFVARELVK------LGGEPRWREN----VVTDNGNWILDVYHLEI 169
Query: 189 PDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
+P + + NIPGV+ +G+F D I G
Sbjct: 170 AEPYKLEEAINNIPGVVTNGIFARQAADVVITAYQSGRI 208
>gi|33151450|ref|NP_872803.1| ribose-5-phosphate isomerase A [Haemophilus ducreyi 35000HP]
gi|41017669|sp|Q7VP95|RPIA_HAEDU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33147670|gb|AAP95192.1| ribose 5-phosphate isomerase A [Haemophilus ducreyi 35000HP]
Length = 219
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA+ A+Q+V +G+G+GST F+ LA I + + V S + +
Sbjct: 1 MTQQEMKKIAAQAALQFVKPDTIIGVGSGSTVNCFIDALA-SIKDEIKGAVAASKASEDQ 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I + + +V+ +D+ IDG DEI + +IKG G AL REKI++ A +FI + D
Sbjct: 60 LRA-MGIEVFNANEVAGLDVYIDGADEITPQGAMIKGGGAALTREKIVSSLAKQFICMVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSSFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT++G ++
Sbjct: 169 ILDVHNFNIYEPLKMEHTINNIAGVVTNGIFAQRYANIIIVGTAEGAKII 218
>gi|217976317|ref|YP_002360464.1| ribose 5-phosphate isomerase [Methylocella silvestris BL2]
gi|217501693|gb|ACK49102.1| ribose 5-phosphate isomerase [Methylocella silvestris BL2]
Length = 241
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 128/218 (58%), Gaps = 2/218 (0%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
I+ V GM LG+GTGSTA+ F+ LL +A G V +P+S T + L + +
Sbjct: 18 IKLVRPGMKLGLGTGSTARHFVDLLGGLVAAGLDVLCVPTSEETRAQAAALGVALTTIDA 77
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+DL++DG DE D LRL+KG GGALLREKI+A A+ +VI D SK V+ +G+ LP
Sbjct: 78 EPELDLTVDGADEFDDSLRLVKGGGGALLREKIVATASKTMVVIADVSKHVEIMGKFPLP 137
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIVDAFFGFIPDPQI 193
+E+ +FG+ T ++ A G E+ LR G G F++D GN+I+D FG +P P+
Sbjct: 138 VEVTRFGLEATRRLIRARAEEAGCAGEIVLRDKGPGQPFITDNGNFILDCHFGALPRPEQ 197
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ +L IPGV+EHGLFI + I G + +
Sbjct: 198 LAQDLSAIPGVVEHGLFIGLAKAVICAGP-GGIEIFGR 234
>gi|124267321|ref|YP_001021325.1| ribose-5-phosphate isomerase A [Methylibium petroleiphilum PM1]
gi|189043819|sp|A2SHQ1|RPIA_METPP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|124260096|gb|ABM95090.1| ribose-5-phosphate isomerase [Methylibium petroleiphilum PM1]
Length = 219
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ ++K R A++YV +G +G+GTGST F+ LA I V S ++TE
Sbjct: 1 MNQDELKTLVGRAALEYVPEGSIVGVGTGSTVNCFIDALAG-IKERIAGAVSSSVKSTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + V S+ + IDG DEID +IKG G AL REKI+A A RF+ I D
Sbjct: 60 L-REKGIRVFEAAAVESLPVYIDGADEIDPHGCMIKGGGAALTREKIVADLAERFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD LGR LP+E+ V++ + G +R ++D G I
Sbjct: 119 ASKLVDVLGRFPLPVEVLPMAVSQIQRRFAK----LGATATVREG------VITDNGQLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVL 229
+D I DP E+ PGV+ G+F + ++GT +G +
Sbjct: 169 LDVQGLRIGDPLAFETEVNQWPGVVTVGVFARHKASVCLLGTPEGVKTLR 218
>gi|195978283|ref|YP_002123527.1| ribose-5-phosphate isomerase A [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689822|sp|B4U3E7|RPIA_STREM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|195974988|gb|ACG62514.1| ribose-5-phosphate isomerase A RpiA [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 227
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 119/228 (52%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + +I G +V + +S T
Sbjct: 2 EALKKLAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRIKEEGLQVVGVTTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +DL++DG DE+D IKG G ALL EKI+A +I + DES
Sbjct: 62 EGLGIPLTSIDDIDCIDLTVDGADEVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ + + R G ++D N+I+D
Sbjct: 122 KLVDHLGAFKLPVEVVQYGADRLFRVFERAGY------KPSFRMKGDKRLITDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P L GV+EHGLF MVD I+ G VL+
Sbjct: 176 LDLGCIENPCEFGRLLDQTVGVVEHGLFNGMVDKVIVAGQAG-VTVLE 222
>gi|187923699|ref|YP_001895341.1| ribose-5-phosphate isomerase A [Burkholderia phytofirmans PsJN]
gi|238689604|sp|B2T3F4|RPIA_BURPP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|187714893|gb|ACD16117.1| ribose 5-phosphate isomerase [Burkholderia phytofirmans PsJN]
Length = 231
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV +G +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDELKQLVGQAAADYVNATVPEGAVIGVGTGSTANCFIDALAGNKAR--YRGAVSSSL 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I + ++ S+ + +DG DEID +IKG GGAL REKI+A + F+
Sbjct: 59 ATTARLQTHGIKVFDLNEIDSLPVYVDGADEIDRSGAMIKGGGGALTREKIVASVSDVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ LG LPIE+ + G +R+ + G F++D
Sbjct: 119 CIADASKLVETLGTFPLPIEVVPMARTAIGRR----VTALGGVPVVRVTKEGV-PFITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I DP+ + + PGV+ GLF + ++GT G +
Sbjct: 174 GNEIIDVKGLRISDPRTLETHINAWPGVVTVGLFAARGANLCLLGTDTGVETI 226
>gi|224050289|ref|XP_002187417.1| PREDICTED: ribose 5-phosphate isomerase A (ribose 5-phosphate
epimerase) [Taeniopygia guttata]
Length = 345
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 20 DGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
+ LG+G+GST + LA+++ + IP+S + + L + +
Sbjct: 130 NNQVLGIGSGSTIVHAVQRLAERVKEENLTIVCIPTSFQARQLILQNGLALSDLDRNPEL 189
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD---FLGRGMLPI 135
D++IDG DE+DS L LIKG GG L +EKI+A A FIVI D K+ D + +PI
Sbjct: 190 DVAIDGADEVDSDLNLIKGGGGCLTQEKIVAGFAKCFIVIADYRKKSDSLGEQWKKGVPI 249
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ AL + FG ELR+ N +G V+D GN+I+D F + + + ++
Sbjct: 250 EVIPMAYVPVTRALTK---KFGGVVELRMAVNKAGPVVTDNGNFILDWKFDKVHEWREVN 306
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ IPGV+E GLFI+M + G DG V +K
Sbjct: 307 RAIKMIPGVVETGLFIDMAELVYFGMEDGSVSVREK 342
>gi|325517969|gb|EGC97792.1| ribose-5-phosphate isomerase A [Burkholderia sp. TJI49]
Length = 231
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAIVGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + ++ PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEILDVKGLQITDPRGLEAQVNGWPGVVTVGLFAERGANLCLLGTENGVETIV 227
>gi|118586410|ref|ZP_01543857.1| ribose 5-phosphate isomerase A [Oenococcus oeni ATCC BAA-1163]
gi|290891191|ref|ZP_06554253.1| hypothetical protein AWRIB429_1643 [Oenococcus oeni AWRIB429]
gi|118433139|gb|EAV39858.1| ribose 5-phosphate isomerase A [Oenococcus oeni ATCC BAA-1163]
gi|290479155|gb|EFD87817.1| hypothetical protein AWRIB429_1643 [Oenococcus oeni AWRIB429]
Length = 232
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 6/211 (2%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENF 61
++K+ AA RA ++V + +G+GTGST K + L K+ + +S+ T +
Sbjct: 6 QNELKKEAAIRAAEFVENDTVVGLGTGSTVKFLVDELGRKVREENLSFTGVTTSKRTASQ 65
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + S + + +DL+IDG D++D+ IKG G ALL EKI+A + + I I D+
Sbjct: 66 AESLGIKIVSLDSIPRIDLTIDGADQVDNNFNGIKGGGAALLWEKIVATNSKKNIWIVDQ 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK VD +G LP+E+ FG L+ +E LN LRL NG ++D NYI+
Sbjct: 126 SKLVDRIGSFPLPVEVIPFGALHVLNKFEE----LNLNPVLRLTENGKK-VMTDSQNYII 180
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
D I DP +S +L N GV+EHGLF+N
Sbjct: 181 DLHLNQIIDPAKLSNQLINTVGVVEHGLFLN 211
>gi|86609486|ref|YP_478248.1| ribose-5-phosphate isomerase A [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558028|gb|ABD02985.1| ribose 5-phosphate isomerase A [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 238
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 89/228 (39%), Positives = 131/228 (57%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ AAR A+Q V GM +G+GTGSTA + LA+++ G ++ +P+S T
Sbjct: 13 DDLKQAAARAAVQKVQSGMVVGLGTGSTAAFAVSALAERMQTEGLQIIGVPTSERTAEQA 72
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IPL + E+ +DL+IDG DEI+ L LIKG GGALLREK++ +A+ I+I D
Sbjct: 73 RSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIADA 132
Query: 122 SKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V R +P+E+ +FG TL+ ++ G LR NG +++D +YI
Sbjct: 133 SKKVAQLGIRFPVPVEVVRFGWKTTLARVE----ALGCTATLRRNANGD-PYLTDEQHYI 187
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D FG + DP I+ +L GV+EHGLFI M AII G +
Sbjct: 188 LDCQFGPMADPAKIADQLKGTVGVVEHGLFIGMAKEAIIALPTGIETL 235
>gi|289581612|ref|YP_003480078.1| ribose 5-phosphate isomerase [Natrialba magadii ATCC 43099]
gi|289531165|gb|ADD05516.1| ribose 5-phosphate isomerase [Natrialba magadii ATCC 43099]
Length = 250
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 11/228 (4%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
K++A RA V DG +G+GTGSTA + + +A+G V+ IP+S +
Sbjct: 23 DTAKQHAGERAADAVEDGTVVGLGTGSTAAYAIEAIGQAVADGLDVRAIPTSFQSRQLAL 82
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEI------DSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ IPL + + V VDL+IDG D++ + LIKG GGA REK++ AA RF+V
Sbjct: 83 EYDIPLTTLDAVDGVDLAIDGADQVVDDPESAAHGALIKGGGGAHAREKLVDAAADRFLV 142
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
+ D SK L R +P+E+ ++ LR + G V+D G
Sbjct: 143 VADPSKLTTDLDRS-VPLEVLPDAHTVVTERVR----ALDGEPTLRDAEHKDGPVVTDNG 197
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
N ++D FG I DP ++ L +IPGV+EHGLF+ + D IGT+DG
Sbjct: 198 NLLLDCEFGTIADPDALATTLASIPGVVEHGLFVGLADVTYIGTADGV 245
>gi|226496888|ref|NP_001152039.1| ribose-5-phosphate isomerase [Zea mays]
gi|195652077|gb|ACG45506.1| ribose-5-phosphate isomerase [Zea mays]
Length = 259
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 100/243 (41%), Positives = 132/243 (54%), Gaps = 13/243 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA+++V GMTLG+GTGSTA + L D + G V +P+S TE
Sbjct: 15 TQDELKRVAAHRALEFVESGMTLGLGTGSTAAHALDRLGDLLRAGALPGVAGVPTSLKTE 74
Query: 60 NFCKIHHIPLHSPEDVS--SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
IPL + S S+ LSIDG DE+D L L+KG GG+LLREK+I A RF+V
Sbjct: 75 AHAARVGIPLLPLDAASGASIRLSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGDRFVV 134
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVAS-CFGLNEELRL-----RRNGSG 170
I DESK V G +P+E+ FG TL +++V G + LR +
Sbjct: 135 IVDESKLVPRLGCTGAVPVEVIPFGAPHTLGLIRKVFDGVPGFHARLRTVPAANGEDSDA 194
Query: 171 LFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F++D GNYIV+ FF G D IS L I GVIEHG+F+ M I+ DG V
Sbjct: 195 PFLTDNGNYIVEMFFEDGIRGDLLDISDRLLRITGVIEHGMFLGMATTVIVANKDGTVTV 254
Query: 229 LQK 231
+ K
Sbjct: 255 INK 257
>gi|229544094|ref|ZP_04433153.1| ribose 5-phosphate isomerase [Bacillus coagulans 36D1]
gi|229325233|gb|EEN90909.1| ribose 5-phosphate isomerase [Bacillus coagulans 36D1]
Length = 228
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 119/221 (53%), Gaps = 9/221 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A +A + V DGM +G+GTGST + L +++ +G + +P+SR TE +
Sbjct: 4 KKMAGEKAAELVEDGMIVGLGTGSTVYYTIKKLGERVQSGLHITGVPTSRATEKLARECG 63
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IP+ D + +D++IDG DE+D L IKG GGALL EK++A A+ R I + D K V
Sbjct: 64 IPIADLNDTAQMDVTIDGADEVDPSLNGIKGGGGALLFEKLVAKASKRNIWVVDSRKMVQ 123
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG LP+E+ FG + + GLN LR +V+DGG+YIVD
Sbjct: 124 QLGAFPLPVEVVPFGYKHLMKTFERE----GLNPV--LRMKEGRPYVTDGGHYIVDIKLK 177
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
PD L GV+EHGLF+ + D +IG DG +
Sbjct: 178 S-PDIGAFGAWLDGYTGVVEHGLFLGICDLVVIG--DGSKV 215
>gi|222153197|ref|YP_002562374.1| ribose-5-phosphate isomerase A [Streptococcus uberis 0140J]
gi|254808723|sp|B9DUK4|RPIA_STRU0 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|222114010|emb|CAR42338.1| ribose 5-phosphate isomerase A [Streptococcus uberis 0140J]
Length = 226
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 119/228 (52%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGM +G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKMAGVTAAQYVKDGMIVGLGTGSTAYFFVEEIGRRVNEEGLQVVGVTTSSATTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +++ +DL++DG DE+D IKG G ALL EKI+A +I + DES
Sbjct: 62 ESLGIPLKAVDEIDEIDLTVDGADEVDKEFNGIKGGGAALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + ++ G N R+ ++D GN+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAERLFRVFEKA----GYNPSFRM--KEDQKLITDMGNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I P + L GV+EHGLF MV I+ DG VL+
Sbjct: 176 LDLKVIEKPFEFAEMLDKTVGVVEHGLFNGMVHKVIVAGKDG-VKVLE 222
>gi|304309770|ref|YP_003809368.1| Ribose 5-phosphate isomerase A [gamma proteobacterium HdN1]
gi|301795503|emb|CBL43701.1| Ribose 5-phosphate isomerase A [gamma proteobacterium HdN1]
Length = 219
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A+ AI+YVVD +G+GTGSTA +F+ LA+ I R + SS T
Sbjct: 1 MTQDEMKKAVAKAAIEYVVDDAVIGVGTGSTANQFIDCLAE-IKTRIR-GAVASSEETRR 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+P+ + + + IDG DE D L L+KG GGA+ REKIIA A +F+ I D
Sbjct: 59 RLVAKGVPVFDLNEGHDIPVYIDGADEFDRNLCLVKGGGGAMTREKIIAAVAKKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V LG+ LPIE+ + + + G + R FV+D GN I
Sbjct: 119 ASKKVAVLGQFPLPIEVIPMARSYVAREMVK----LGGDPVYREG------FVTDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
+D I +P + + NI GV+ GLF D ++G +G ++
Sbjct: 169 LDIHNLEIAEPVKLENIINNIVGVVTVGLFAKRGADIVLMGHQEGIEVIR 218
>gi|322411934|gb|EFY02842.1| ribose-5-phosphate isomerase A [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 227
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 85/228 (37%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKEEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +++ S+DL++DG DE+D IKG G ALL EKI+A +I + D+S
Sbjct: 62 ESLGIPLKSVDEIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDDS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ L ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLLRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G+I DP L GV+EHGLF MVD I+ + G VL+
Sbjct: 176 LDLGYIEDPVAFGRLLDGTVGVVEHGLFNGMVDKVIVASKSG-VTVLE 222
>gi|116491584|ref|YP_811128.1| ribose-5-phosphate isomerase A [Oenococcus oeni PSU-1]
gi|116092309|gb|ABJ57463.1| ribose-5-phosphate isomerase [Oenococcus oeni PSU-1]
Length = 232
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 6/211 (2%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENF 61
++K+ AA RA ++V + +G+GTGST K + L K+ + +S+ T +
Sbjct: 6 QNELKKEAAIRAAEFVENDTVVGLGTGSTVKFLVDELGRKVREENLSFTGVTTSKRTASQ 65
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + S + + +DL+IDG D++D+ IKG G ALL EKI+A + + I I D+
Sbjct: 66 AESLGIKIVSLDSIPRIDLTIDGADQVDNNFNGIKGGGAALLWEKIVATNSKKNIWIVDQ 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK VD +G LP+E+ FG L+ +E LN LRL NG ++D NYI+
Sbjct: 126 SKLVDRIGSFPLPVEVIPFGALHVLNKFEE----LNLNPALRLTENGKK-VMTDSQNYII 180
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
D I DP +S +L N GV+EHGLF+N
Sbjct: 181 DLHLNQIIDPAKLSNQLINTVGVVEHGLFLN 211
>gi|172060522|ref|YP_001808174.1| ribose-5-phosphate isomerase A [Burkholderia ambifaria MC40-6]
gi|238689141|sp|B1YPI1|RPIA_BURA4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|171993039|gb|ACB63958.1| ribose 5-phosphate isomerase [Burkholderia ambifaria MC40-6]
Length = 230
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADGSKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTQDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEIIDVKGLQIVDPRGFEAQINAWPGVVTVGLFAERGANLCLLGTPNGVETIV 227
>gi|325695845|gb|EGD37736.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK160]
Length = 225
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G +V + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQGGMIVGLGTGSTAYYFVEEIGRRIKEEGLQVTAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+D+ IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDEVDLVDVTVDGADEVDAAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFREKDDQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|94990262|ref|YP_598362.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS10270]
gi|166229246|sp|Q1JHB8|RPIA_STRPD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|94543770|gb|ABF33818.1| Ribose 5-phosphate isomerase [Streptococcus pyogenes MGAS10270]
Length = 227
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D S
Sbjct: 62 EGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDAS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + DG VL+
Sbjct: 176 LDLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDG-VTVLE 222
>gi|17545951|ref|NP_519353.1| ribose-5-phosphate isomerase A [Ralstonia solanacearum GMI1000]
gi|30173344|sp|Q8Y013|RPIA_RALSO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|17428246|emb|CAD14934.1| probable ribose-5-phosphate isomerase a (phosphoriboisomerase
a)(pri) protein [Ralstonia solanacearum GMI1000]
Length = 228
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID +IKG GGAL REKI+A A RF+
Sbjct: 59 ASTRRLQGHGFAVLDLNEVDTIPVYVDGADEIDDTGAMIKGGGGALTREKIVASVAGRFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG LP+E+ + G LR+ + G ++ +D
Sbjct: 119 CIADGSKLVDVLGAFPLPVEVVPMARAAVARQ----LAALGGQPRLRMTKEG-QIYQTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I +P+ + ++ +IPGV+ GLF D ++GT G
Sbjct: 174 GNVILDVSGLRIGEPKTLEAQINDIPGVVTVGLFAKRGADVLLLGTEAGV 223
>gi|306827514|ref|ZP_07460797.1| ribose 5-phosphate isomerase A [Streptococcus pyogenes ATCC 10782]
gi|304430312|gb|EFM33338.1| ribose 5-phosphate isomerase A [Streptococcus pyogenes ATCC 10782]
Length = 227
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D S
Sbjct: 62 EGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDAS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + DG VL+
Sbjct: 176 LDLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDG-VTVLE 222
>gi|322368045|ref|ZP_08042614.1| ribose-5-phosphate isomerase A [Haladaptatus paucihalophilus DX253]
gi|320552061|gb|EFW93706.1| ribose-5-phosphate isomerase A [Haladaptatus paucihalophilus DX253]
Length = 228
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 6/222 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ KRNA A + V DGM +G+GTGST + L + +G V+ +P+S + +
Sbjct: 8 DEAKRNAGESAAEAVEDGMVVGLGTGSTTAHAIRALGRMVDSGLDVRGVPTSFQSRQLAQ 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + VS +D++IDG D+ LIKG G A REKI+ AA RF+V+ D SK
Sbjct: 68 QEGIPLTDLDTVSRIDVAIDGADQFAG-GDLIKGGGAAHAREKIVDGAADRFLVVVDPSK 126
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ L +P+E+ ++ G N LR G V+D GN ++D
Sbjct: 127 AAERLH-HPVPVEVLPAARTTVADDVRR----LGGNPTLRDAERKDGPVVTDNGNLVLDC 181
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
FG I P ++ + IPGV+EHGLF+ M D G DG
Sbjct: 182 EFGEIDSPGDLAADFSAIPGVVEHGLFVGMADEIHAGNDDGV 223
>gi|46143685|ref|ZP_00134649.2| COG0120: Ribose 5-phosphate isomerase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208917|ref|YP_001054142.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
L20]
gi|190150727|ref|YP_001969252.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303250953|ref|ZP_07337142.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303252457|ref|ZP_07338621.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307246365|ref|ZP_07528441.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307248492|ref|ZP_07530510.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250723|ref|ZP_07532657.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253100|ref|ZP_07534981.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255351|ref|ZP_07537161.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307257520|ref|ZP_07539284.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307259801|ref|ZP_07541519.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307261932|ref|ZP_07543590.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264128|ref|ZP_07545722.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|166200028|sp|A3N2A1|RPIA_ACTP2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238692401|sp|B3H285|RPIA_ACTP7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|126097709|gb|ABN74537.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915858|gb|ACE62110.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648658|gb|EFL78850.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650170|gb|EFL80337.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852698|gb|EFM84927.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306854968|gb|EFM87153.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857227|gb|EFM89349.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859394|gb|EFM91426.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861660|gb|EFM93644.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306863956|gb|EFM95875.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306866099|gb|EFM97969.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868343|gb|EFN00162.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870502|gb|EFN02252.1| Ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 219
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA+ A+Q+V +G+G+GST F+ LA + +S+ +E
Sbjct: 1 MTQQEMKKIAAQAALQFVKPDTIVGVGSGSTVNCFIDALASM--KDQIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + +VS +D+ IDG DEI + +IKG G AL REKI++ A +F+ I D
Sbjct: 59 RLRAIGIEVFNANEVSELDVYIDGADEITPQGAMIKGGGAALTREKIVSSLAKKFVCIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 GSKQVDVLGTTFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT +G ++
Sbjct: 169 ILDVHNFHIIEPLKMEHTINNIAGVVTNGIFAQRYANVTIVGTPEGAKII 218
>gi|157414091|ref|YP_001484957.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9215]
gi|157388666|gb|ABV51371.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. MIT
9215]
Length = 231
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 8/228 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ A AI+ V M LG+G+GSTA + LAD+I +G ++ + +S +E
Sbjct: 1 MKKIVADAAIKEVESDMILGLGSGSTAALMIKSLADEIRSGKLQNIRGVATSFQSEVLAL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL VS +DL+IDG DE+D R +LIKG G +REK++A A+R +++ DE+K
Sbjct: 61 ELDIPLIDLASVSQIDLAIDGADEVDPRFQLIKGGGACHVREKLVASKANRLLIVVDETK 120
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V LP+E+ + +EV S + LR+ +G V+D GN I+D
Sbjct: 121 LVQNLNQTFPLPVEVLPNAWKQV----EEVISEMKGSSSLRMATKKAGPIVTDQGNLILD 176
Query: 183 AFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FF G I +P+ I L NIPGV+E+GLF+++ D ++G + V+
Sbjct: 177 VFFDGGIKNPKDIELSLNNIPGVLENGLFVDLTDKVLVGKIENNIPVV 224
>gi|284929511|ref|YP_003422033.1| ribose-5-phosphate isomerase [cyanobacterium UCYN-A]
gi|284809955|gb|ADB95652.1| ribose-5-phosphate isomerase [cyanobacterium UCYN-A]
Length = 233
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 7/218 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A +Y+ +G+GTGST + + ++ +G + IP+S E K
Sbjct: 8 MKQQVGKAAAEYIESNSIIGLGTGSTTAYAIEHIGKRLQSGTLKNIVGIPTSFQAEVLAK 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
++IPL + + V +D++IDG DE+D LIKG G A +EKI+ A +FIV+ D +K
Sbjct: 68 QYNIPLSTLDMVDHIDIAIDGADEVDPYKNLIKGGGAAHTQEKIVDSLAKKFIVVVDGNK 127
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ + + LKE G + +LR+ +G V+D GN I+D
Sbjct: 128 MVDKLGSTVPVPVEVIPKALTPVIRQLKE----LGGSPDLRMGVKKAGPVVTDQGNLIID 183
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
F ++ DP+ + + NIPGV+++GLF+++ D +IG
Sbjct: 184 TKFDYVNDPKSLEAIINNIPGVLDNGLFVDVADLILIG 221
>gi|15902775|ref|NP_358325.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae R6]
gi|182683740|ref|YP_001835487.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae CGSP14]
gi|298503167|ref|YP_003725107.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
TCH8431/19A]
gi|15458323|gb|AAK99535.1| Ribose-5-phosphate epimerase [Streptococcus pneumoniae R6]
gi|182629074|gb|ACB90022.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae CGSP14]
gi|298238762|gb|ADI69893.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
TCH8431/19A]
Length = 246
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 7/231 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 19 SVENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTK 78
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + D
Sbjct: 79 QAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVD 138
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V+ LG LP+E+ Q+G + + + R FV+D N+I
Sbjct: 139 ESKLVEKLGAFKLPVEVVQYGAEQVFRHFERAGY------KPSFREKDGQRFVTDMQNFI 192
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D I +P EL ++ GV+EHGLF MVD I+ DG + K
Sbjct: 193 IDLALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSK 243
>gi|56807348|ref|ZP_00365343.1| COG0120: Ribose 5-phosphate isomerase [Streptococcus pyogenes M49
591]
gi|94994183|ref|YP_602281.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS10750]
gi|139473946|ref|YP_001128662.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes str.
Manfredo]
gi|209559242|ref|YP_002285714.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes NZ131]
gi|166229247|sp|Q1J737|RPIA_STRPF RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166229248|sp|A2RF13|RPIA_STRPG RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238057753|sp|B5XL07|RPIA_STRPZ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|94547691|gb|ABF37737.1| Ribose 5-phosphate isomerase [Streptococcus pyogenes MGAS10750]
gi|134272193|emb|CAM30439.1| ribose 5-phosphate isomerase A [Streptococcus pyogenes str.
Manfredo]
gi|209540443|gb|ACI61019.1| Ribose 5-phosphate isomerase A [Streptococcus pyogenes NZ131]
Length = 227
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D S
Sbjct: 62 EGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDAS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + DG VL+
Sbjct: 176 LDLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDG-VTVLE 222
>gi|225870687|ref|YP_002746634.1| ribose 5-phosphate isomerase A [Streptococcus equi subsp. equi
4047]
gi|254808720|sp|C0M7X6|RPIA_STRE4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|225700091|emb|CAW94173.1| ribose 5-phosphate isomerase A [Streptococcus equi subsp. equi
4047]
Length = 227
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 119/228 (52%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + +I G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRIKEEGLQVVGVTTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +DL++DG DE+D IKG G ALL EKI+A +I + DES
Sbjct: 62 EGLGIPLTSIDDIDCIDLTVDGADEVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ + + R G ++D N+I+D
Sbjct: 122 KLVDHLGAFKLPVEVVQYGADRLFRVFERAGY------KPSFRMKGDKRLITDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P L GV+EHGLF MVD I+ G VL+
Sbjct: 176 LNLGCIENPCEFGRLLDQTVGVVEHGLFNGMVDKVIVAGQAG-VTVLE 222
>gi|300172333|ref|YP_003771498.1| ribose 5-phosphate isomerase A [Leuconostoc gasicomitatum LMG
18811]
gi|299886711|emb|CBL90679.1| ribose 5-phosphate isomerase A [Leuconostoc gasicomitatum LMG
18811]
Length = 228
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 8/229 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ K+ AA A+ Y+ DGM +G+GTGST + +A G ++ + +S+ T
Sbjct: 3 TQDEKKKRAAEVAVNYIKDGMVVGLGTGSTVMYLLEAIA---RQGLKISGVTTSKKTSKI 59
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
C I ++ ++V +D++IDG DE+D + IKG G ALL EKI+A + R I I D+
Sbjct: 60 CASLGIKVNDIDNVDHIDVTIDGADEVDVYMNGIKGGGAALLMEKIVAKNSKRNIWIVDD 119
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
+K D LG LP+E+ +G + L + GL LR+ +N V+DGG+YI+
Sbjct: 120 TKVHDILGTFPLPVEVVPYGSGRLLKKFNDK----GLKPILRMDKNK-LPIVTDGGHYII 174
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D I +PQ ++ L GV+EHGLF+++ D IIG +
Sbjct: 175 DLHLNAIDNPQNLAEYLERQVGVVEHGLFLDVADVIIIGGDKNIIKERK 223
>gi|299822429|ref|ZP_07054315.1| ribose-5-phosphate isomerase [Listeria grayi DSM 20601]
gi|299815958|gb|EFI83196.1| ribose-5-phosphate isomerase [Listeria grayi DSM 20601]
Length = 231
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 131/228 (57%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ A +A ++V DGMT+G+GTGST + + + + NG ++ +P+S T +
Sbjct: 6 MNAKQLAGEKAAEWVEDGMTIGLGTGSTVYYTIEKIGEMVKNGLQIVGVPTSERTRIQAE 65
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S +V +DL+IDG DE+D+ R IKG GGALLREK++A + I + +K
Sbjct: 66 GLGIPLTSLNEVEKIDLTIDGSDEVDASFRGIKGGGGALLREKMVADISDTNIWVVSSNK 125
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIVD 182
RVD LG+ LPIE+ FG + + L++ + + RLR+ G ++V+D GNYI+D
Sbjct: 126 RVDVLGKFPLPIEVIPFGYKQVANKLQKRS------ADARLRKTEDGDIYVTDNGNYILD 179
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+ DP L +PG++E G F+ +VD I + GE + +
Sbjct: 180 VYDQAFTDPAEWQDWLQKVPGIVEQGFFLGIVDIVIAASESGEIELFE 227
>gi|330998677|ref|ZP_08322406.1| ribose 5-phosphate isomerase A [Parasutterella excrementihominis
YIT 11859]
gi|329576416|gb|EGG57928.1| ribose 5-phosphate isomerase A [Parasutterella excrementihominis
YIT 11859]
Length = 244
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 15/231 (6%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
Q+K+ AA+ A++YVV+G LG+GTG+T F+ LA + SS T
Sbjct: 17 QNQLKQMAAKAALEYVVEGEYLGVGTGTTVGFFITELATSGKK--VKGCVSSSEATTRQL 74
Query: 63 KIHHIPLHSPED-VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ D V + + IDG DEID +IKG GGAL REKI+A A+ +F+ I DE
Sbjct: 75 LAYGIPVCDLNDIVDYLPVYIDGCDEIDGNFCMIKGGGGALTREKIVAQASEKFVCIADE 134
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG LP+E+ V+ A+++ G + +R F++D GN I+
Sbjct: 135 SKVVKQLGAFPLPLEVIPMAVSSVSRAMED----LGGHPVVRD-------FITDNGNNII 183
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
D I +PQ++ + IPGV+ G+F + D ++ + G + K
Sbjct: 184 DVHGLQIKEPQLLENAINKIPGVVTCGIFAHRGADVLLVASEAGIKVTKPK 234
>gi|148981098|ref|ZP_01816291.1| ribose-5-phosphate isomerase A [Vibrionales bacterium SWAT-3]
gi|145961001|gb|EDK26325.1| ribose-5-phosphate isomerase A [Vibrionales bacterium SWAT-3]
Length = 218
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A++YV +G +G+GTGST F+ L + + + V S +T+
Sbjct: 1 MTQDEMKKAAGWAALKYVEEGSIVGVGTGSTVNHFIDALG-TMKDKIKGAVSSSVASTQR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I ++ DV+ +D+ +DG DEI+ +IKG G AL REKI+A + +F+ I D
Sbjct: 60 L-EELEIKVYECNDVAKLDIYVDGADEINPTRDMIKGGGAALTREKIVAAISDKFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K VD LG+ LP+E+ + G + R +D GN I
Sbjct: 119 GTKAVDVLGKFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------CTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAI 218
+D + I +P+ + + I GV+ GLF + D I
Sbjct: 169 LDVYGMAIENPKQLEDIINGIAGVVTVGLFAHRGADVVI 207
>gi|91772788|ref|YP_565480.1| ribose-5-phosphate isomerase [Methanococcoides burtonii DSM 6242]
gi|91711803|gb|ABE51730.1| D-Ribose-5-phosphate isomerase [Methanococcoides burtonii DSM 6242]
Length = 231
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIH 65
K A A V DGM +G+GTGST + + ++ G V + +S E
Sbjct: 13 KEAAGNAAASLVEDGMIIGLGTGSTTAFAIAEVGRRVREEGLNVLAVVTSYQAEMLAIEA 72
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+PL S + +DL+IDG D++D++L +IKG G A EK++AH+A RFIV+ DESK
Sbjct: 73 GVPLTSLAEHPVLDLAIDGADQVDAKLNVIKGGGAAHTHEKVVAHSAKRFIVVVDESKIS 132
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+ L +PIE+ + K+ G ++RL G +SD GN I+D F
Sbjct: 133 EELDHF-VPIEVLPYARELA----KKQFIELGGKPQIRLASRKDGPVISDNGNVIIDVEF 187
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I D +S +L GV+EHG+F+N D +G DG ++
Sbjct: 188 GVIEDAAELSQKLSTCVGVVEHGIFLN-TDEVYVGMKDGSVKIIN 231
>gi|94988382|ref|YP_596483.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS9429]
gi|94992264|ref|YP_600363.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS2096]
gi|166229244|sp|Q1JC89|RPIA_STRPB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166229245|sp|Q1JM73|RPIA_STRPC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|94541890|gb|ABF31939.1| ribose 5-phosphate isomerase [Streptococcus pyogenes MGAS9429]
gi|94545772|gb|ABF35819.1| Ribose 5-phosphate isomerase [Streptococcus pyogenes MGAS2096]
Length = 227
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 121/226 (53%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D S
Sbjct: 62 EGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDAS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
G I DP L GV+EHGLF MVD I+ + DG ++
Sbjct: 176 LDLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDGVIVL 221
>gi|225868386|ref|YP_002744334.1| ribose 5-phosphate isomerase A [Streptococcus equi subsp.
zooepidemicus]
gi|259494154|sp|C0ME44|RPIA_STRS7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|225701662|emb|CAW98973.1| ribose 5-phosphate isomerase A [Streptococcus equi subsp.
zooepidemicus]
Length = 227
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 119/228 (52%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + +I G +V + +S T
Sbjct: 2 EALKKLAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRIKEEGLQVVGVTTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +DL++DG DE+D IKG G ALL EKI+A +I + DES
Sbjct: 62 EGLGIPLTSIDDIDCIDLTVDGADEVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K VD LG LP+E+ Q+G ++ + + R G ++D N+I+D
Sbjct: 122 KLVDHLGAFKLPVEVVQYGADRLFRVFERAGY------KPSFRMKGDKRLITDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P L GV+EHGLF MVD I+ G VL+
Sbjct: 176 LDLGCIENPFDFGRLLDQTVGVVEHGLFNGMVDKVIVAGQAG-VTVLE 222
>gi|15674914|ref|NP_269088.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes M1 GAS]
gi|21910144|ref|NP_664412.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS315]
gi|28896157|ref|NP_802507.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes SSI-1]
gi|71910508|ref|YP_282058.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS5005]
gi|54039270|sp|P66698|RPIA_STRP3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|54042183|sp|P66697|RPIA_STRP1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|13622055|gb|AAK33809.1| putative ribose 5-phosphate isomerase [Streptococcus pyogenes M1
GAS]
gi|21904337|gb|AAM79215.1| putative ribose 5-phosphate isomerase [Streptococcus pyogenes
MGAS315]
gi|28811407|dbj|BAC64340.1| putative ribose 5-phosphate isomerase [Streptococcus pyogenes
SSI-1]
gi|71853290|gb|AAZ51313.1| ribose 5-phosphate isomerase [Streptococcus pyogenes MGAS5005]
Length = 227
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
++ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D S
Sbjct: 62 EVLGIPLKSIDDIDSIDLTVDGADEVDKNFNGIKGGGAALLMEKIVATPTKEYIWVVDAS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + DG VL+
Sbjct: 176 LDLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDG-VTVLE 222
>gi|315222530|ref|ZP_07864419.1| ribose 5-phosphate isomerase A [Streptococcus anginosus F0211]
gi|315188216|gb|EFU21942.1| ribose 5-phosphate isomerase A [Streptococcus anginosus F0211]
Length = 229
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A +YV DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEYVKDGMVVGLGTGSTAYYFVEEVGRRIKEEGLKITAVTTSSTTSEQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S ++V VD+++DG DE+D+ IKG GGALL EK++A +I + DES
Sbjct: 62 RRLDIPLKSIDEVDEVDVTVDGADEVDTDFNGIKGGGGALLMEKVVATPTKTYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V LG LP+E+ Q+G + + + R +V+D N+I+D
Sbjct: 122 KMVGKLGAFKLPVEVVQYGAEQLFRRFEHAGY------KPSFREKNGKRYVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I +P +L ++ GV+EHGLF MVD I+ +G +L+
Sbjct: 176 LDLGVIENPVEFGQKLDHVVGVVEHGLFNQMVDMVIVAGGNG-VQILK 222
>gi|308446572|ref|XP_003087213.1| hypothetical protein CRE_25046 [Caenorhabditis remanei]
gi|308259584|gb|EFP03537.1| hypothetical protein CRE_25046 [Caenorhabditis remanei]
Length = 237
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 4/230 (1%)
Query: 3 ALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
+ K+ A RR I ++ DGM LG+G+G+T+ F+ L I G ++ +SR+T
Sbjct: 5 QDEAKKVAGRRVIQDFIHDGMKLGLGSGTTSHFFVRELGAHIREHGLTLRCTTTSRSTIE 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + P ++ +DL+IDG DE+D + +IKG G LL EKIIAHA+ + I I D
Sbjct: 65 VAQQVGIEITDPNEIGEIDLTIDGPDEVDHQFNMIKGGGACLLWEKIIAHASKQMICICD 124
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
E+K VD LG LP+E+ QF +TL ++ V + G++ RR G V+D G++
Sbjct: 125 ETKIVDCLGGFPLPVEVVQFAWKQTLVMVERVLAEHGIDNIRIERRMRDGQPVVTDSGHF 184
Query: 180 IVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+D G I DP + EL IPGV+E+GLF ++ DG V
Sbjct: 185 ILDCHCGPIIKDPSPLEIELNRIPGVVENGLFTREAVGMVVACFDGTSYV 234
>gi|326919637|ref|XP_003206086.1| PREDICTED: ribose-5-phosphate isomerase-like [Meleagris gallopavo]
Length = 248
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 7/217 (3%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
+ LG+G+GST + LA+++ + IP+S + + L +
Sbjct: 32 KNNQVLGIGSGSTIVHAVHRLAERVKQENLTIVCIPTSFQARQLILQNGLTLSDLDRHPE 91
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD---FLGRGMLP 134
+D++IDG DE+DS L LIKG GG L +EKI+A A FIVI D K+ + + +P
Sbjct: 92 LDVAIDGADEVDSDLNLIKGGGGCLTQEKIVAGYAKCFIVIADYRKKSESLGEQWKKGIP 151
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
IE+ AL + FG ELR+ + +G V+D GN+I+D F + + +
Sbjct: 152 IEVIPMAYVPVTRALTKN---FGGAAELRMAVSKAGPVVTDNGNFILDWKFDKVHEWSEV 208
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ + IPGV+E GLFI+M + G DG V +K
Sbjct: 209 NTAIKMIPGVVETGLFIDMAEVVYFGMEDGSVSVREK 245
>gi|330833099|ref|YP_004401924.1| ribose 5-phosphate isomerase A [Streptococcus suis ST3]
gi|329307322|gb|AEB81738.1| ribose 5-phosphate isomerase A [Streptococcus suis ST3]
Length = 224
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+K +A ++V DGM +G+GTGSTA F+ + ++A G ++ + +S T
Sbjct: 3 NLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVQEIGRRVAEEGLQITGVTTSHATAEHAA 62
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + ++V VDL++DG DE+D IKG G ALL EK++A + I I DESK
Sbjct: 63 SLGIPLKNIDEVEYVDLTVDGADEVDGDFNGIKGGGAALLMEKVVAVNSKDCIWIVDESK 122
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG LP+E+ Q+G ++ G R+R ++D N+I+D
Sbjct: 123 VVQTLGAFKLPVEVVQYGAENLFRLFEKK----GYRPSFRMR--NGEKHITDMQNFIIDL 176
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I D ++ EL GV+EHGLFI ++ I+GT +G ++ +K
Sbjct: 177 DLRRIEDTYALAEELDRTVGVVEHGLFIGLISKVIVGTLEGPNIIEKK 224
>gi|50914058|ref|YP_060030.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS10394]
gi|67461344|sp|Q5XCL6|RPIA_STRP6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|50903132|gb|AAT86847.1| Ribose 5-phosphate isomerase [Streptococcus pyogenes MGAS10394]
Length = 227
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 8/226 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKI 64
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T +
Sbjct: 4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQAEG 63
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D SK
Sbjct: 64 LGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKM 123
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 124 VEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIIDLD 177
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + DG VL+
Sbjct: 178 LGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDG-VTVLE 222
>gi|330991025|ref|ZP_08314979.1| Ribose-5-phosphate isomerase A [Gluconacetobacter sp. SXCC-1]
gi|329761846|gb|EGG78336.1| Ribose-5-phosphate isomerase A [Gluconacetobacter sp. SXCC-1]
Length = 234
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR AA A V DGM +G+G+GST+ + L + A G R IP+S + +
Sbjct: 11 ELKRKAAIEAADMVKDGMVVGLGSGSTSAFMIEELGRRWAEGLRFCAIPTSERSAEQARS 70
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H I L + +D+ IDG DE++ L LIKG GGAL REKI+A A+ RF+V+ D+SK
Sbjct: 71 HGIKLVTFATHPQIDIDIDGADEVERGTLNLIKGLGGALFREKIVAAASRRFVVVVDDSK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +P+E+ FG T G RL R+G +FV+DGGN I+D
Sbjct: 131 LVDRLGAAVPVPVEVANFGWTSTARQ----LEALGAKVVQRLDRSG-NVFVTDGGNMILD 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
FG I D + +L + GVIE GLFI I+ T+DG
Sbjct: 186 CHFGEIADSPALQRQLDGVVGVIETGLFIGRTSEVIVATADG 227
>gi|294788042|ref|ZP_06753286.1| ribose 5-phosphate isomerase A [Simonsiella muelleri ATCC 29453]
gi|294484335|gb|EFG32018.1| ribose 5-phosphate isomerase A [Simonsiella muelleri ATCC 29453]
Length = 223
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+KR AA +A+++V + +G+GTGST F+ L + + +SR +
Sbjct: 4 SQDDLKRLAAAKALEFVPENEYIGIGTGSTVNFFIEALGKS--DKKIKGAVTTSRKSSEL 61
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP +V+ + + DG DE++ L++IKG GGA L EKI+A + +FI + DE
Sbjct: 62 LAQYGIPEIHANEVTRLPVYFDGADEVNHTLQMIKGGGGAHLTEKIVARLSEQFICLADE 121
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ + +E+ + G N ELR+ F S GN I+
Sbjct: 122 SKYVTRLGKFPVAVEVIPMARSMVARK----IVALGGNPELRIG------FKSFNGNEIL 171
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D + P + L I GV+E+G+F + D I+ +G L+
Sbjct: 172 DVSGLDLSKPMEMEDRLNQILGVVENGIFAHDTADLLILAQQNGVELI 219
>gi|251782600|ref|YP_002996903.1| ribose-5-phosphate isomerase A [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391230|dbj|BAH81689.1| ribose-5-phosphate isomerase A [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323127422|gb|ADX24719.1| ribose-5-phosphate isomerase A [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 227
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKEEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D+S
Sbjct: 62 ESLGIPLKSVDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDDS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ L ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLLRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + G VL+
Sbjct: 176 LDMGCIEDPLAFGHLLDGTVGVVEHGLFNGMVDKVIVASKSG-VTVLE 222
>gi|19745957|ref|NP_607093.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS8232]
gi|41017762|sp|Q8P1C5|RPIA_STRP8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|19748116|gb|AAL97592.1| putative ribose 5-phosphate isomerase [Streptococcus pyogenes
MGAS8232]
Length = 227
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
++ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D S
Sbjct: 62 EVLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDAS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + DG VL+
Sbjct: 176 LDLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDG-VTVLE 222
>gi|301115350|ref|XP_002905404.1| ribose-5-phosphate isomerase [Phytophthora infestans T30-4]
gi|262110193|gb|EEY68245.1| ribose-5-phosphate isomerase [Phytophthora infestans T30-4]
Length = 240
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 123/232 (53%), Gaps = 9/232 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
Q KR AAR+A+ YV G +G+G+GST L + + ++ IP+S +
Sbjct: 6 EQSKRTAARQAVDEYVKSGYVVGVGSGSTVVYAAERLGELVKEKKLTDIKCIPTSFQAKQ 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H + L S ++ +D++IDG DE+D +L IKG GG L+EKI+A AA++F+VI D
Sbjct: 66 LIVQHKLTLSSLDENPVIDVTIDGADEVDLQLNCIKGGGGCQLQEKIVAFAANKFVVIAD 125
Query: 121 ESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K +P+E+ ++ +++ FG LR+ ++ +G V+D G
Sbjct: 126 YRKESKQLGEQWTQGVPVEVVPMAYVPLMNKMEQ---DFGGKSVLRMAKSKAGPVVTDNG 182
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
N+++D FG I DP+ + L +PGV+E GLF M + A G +DG
Sbjct: 183 NFVLDVNFGVINDPKTLCDRLKLLPGVVEVGLFCGMAEKAFFGQTDGSFTTR 234
>gi|115351503|ref|YP_773342.1| ribose-5-phosphate isomerase A [Burkholderia ambifaria AMMD]
gi|122323337|sp|Q0BFR5|RPIA_BURCM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|115281491|gb|ABI87008.1| ribose-5-phosphate isomerase [Burkholderia ambifaria AMMD]
Length = 230
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + SS
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA--VKARYRGAVSSSL 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H I + ++ S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 59 ATTERLKSHGIKVFDLNEIESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVETIV 227
>gi|148243063|ref|YP_001228220.1| ribose-5-phosphate isomerase A [Synechococcus sp. RCC307]
gi|166229253|sp|A5GVF8|RPIA_SYNR3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|147851373|emb|CAK28867.1| Ribose-5-phosphate isomerase A [Synechococcus sp. RCC307]
Length = 237
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 9/233 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
QMK+ A A V +GM LG+G+GSTA + + ++ +G + + +S E
Sbjct: 5 QTQMKQAVALAATDQVKNGMVLGLGSGSTAALMIQEVGARLRDGRLTDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S + +DL+IDG DE+D LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LAAELGIPLQSLNAIDRIDLAIDGADEVDPAFELIKGGGACHVQEKLVARRAERFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K V+ L +LP+E+ + + L++ G + ELR+ + +G V+D GN
Sbjct: 125 STKLVERLNLGFLLPVEVLAGAWRQVQAELQQ----LGGSAELRMAQRKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
++D F G I DP + + NIPGV+E+GLF+ + D ++G +DG V
Sbjct: 181 VLDVSFAGGINDPAGLETTINNIPGVLENGLFVGLADQVLVGEINDGVAGVRD 233
>gi|71903340|ref|YP_280143.1| ribose-5-phosphate isomerase A [Streptococcus pyogenes MGAS6180]
gi|123640028|sp|Q48U18|RPIA_STRPM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|71802435|gb|AAX71788.1| ribose 5-phosphate isomerase [Streptococcus pyogenes MGAS6180]
Length = 227
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G +V + +S T
Sbjct: 2 EALKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQVVGVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
++ IPL S +D+ S+DL++DG DE+D IKG G ALL EKI+A +I + D S
Sbjct: 62 EVLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDAS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R G V+D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVVQYGADRLFRVFEKAGY------KPSFRMKGDSRLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I DP L GV+EHGLF MVD I+ + DG VL+
Sbjct: 176 LDLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDG-VTVLE 222
>gi|165976878|ref|YP_001652471.1| ribose-5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|238687502|sp|B0BR42|RPIA_ACTPJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|165876979|gb|ABY70027.1| ribose 5-phosphate isomerase A [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 219
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA+ A+Q+V +G+G+GST F+ LA + + + V S +
Sbjct: 1 MTQQEMKKIAAQAALQFVKPDTIVGVGSGSTVNCFIDALA-SMKDQIKGAVAASKASEGR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I + + +VS +D+ IDG DEI + +IKG G AL REKI++ A +F+ I D
Sbjct: 60 LRA-IGIEVFNANEVSELDVYIDGADEITPQGAMIKGGGAALTREKIVSSLAKKFVCIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 GSKQVDVLGTTFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT +G ++
Sbjct: 169 ILDVHNFHIIEPLKMEHTINNIAGVVTNGIFAQRYANVTIVGTPEGAKII 218
>gi|163851721|ref|YP_001639764.1| ribose 5-phosphate isomerase [Methylobacterium extorquens PA1]
gi|238687352|sp|A9W537|RPIA_METEP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|163663326|gb|ABY30693.1| ribose 5-phosphate isomerase [Methylobacterium extorquens PA1]
Length = 236
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 136/213 (63%), Gaps = 1/213 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A +KR AA RAI V DGM LG+GTGSTA F+ LL +++ G +V +P+S T
Sbjct: 1 MSAPDLKRAAAERAIPLVEDGMRLGIGTGSTAAAFIKLLGERVRAGLKVTGVPTSEATRI 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ IPL + ED+ +DL+IDG DE+D LRLIKG G ALLREKI+A A+ R +VI D
Sbjct: 61 ACEREGIPLATLEDLPELDLTIDGADEVDGSLRLIKGGGAALLREKIVAVASRRMVVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SK V+ LG LP+E++ FG+ T A++ + G E R + SG ++DGG+
Sbjct: 121 ASKHVETLGAFPLPVEVNLFGIGATTRAVEAAVARAGCTGETVRRHDASGAPLLTDGGHA 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
I+D G IPDP+ +S L +PGV+EHGLF+
Sbjct: 181 ILDLRLGRIPDPEALSAGLWAVPGVVEHGLFLG 213
>gi|52548993|gb|AAU82842.1| ribose 5-phosphate epimerase [uncultured archaeon GZfos1D1]
Length = 239
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 87/225 (38%), Positives = 126/225 (56%), Gaps = 7/225 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K +A A+ V DGM +G+GTGSTA ++ L +A G + +P+S +E
Sbjct: 17 KEASALSAVTLVADGMIVGIGTGSTAGYAIVELGRLVARGIDILCVPTSYQSEMLAAQQK 76
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IP+ + + +D+ +DG D+ID L IKG G A REK+IAHAASR +++ D K V
Sbjct: 77 IPITTLSEHPKLDIVLDGADQIDRNLVAIKGGGAAHTREKVIAHAASRVVLMADHEKVVP 136
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
L +PIE+ + ++ G ELR+ G V+D GN+++DA FG
Sbjct: 137 GLD-HAVPIEVLPYARTLVEREVR----ALGGIPELRMAARKDGPVVTDNGNFVIDADFG 191
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I DP +SGEL + G IEHG+F+N VD IGT+DG VL++
Sbjct: 192 AIDDPARLSGELSALVGAIEHGIFLN-VDEVHIGTADG-VKVLKR 234
>gi|300709590|ref|YP_003735404.1| ribose-5-phosphate isomerase A [Halalkalicoccus jeotgali B3]
gi|299123273|gb|ADJ13612.1| ribose-5-phosphate isomerase A [Halalkalicoccus jeotgali B3]
Length = 229
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 8/225 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KRNA RA + V DG +G+GTGST + L ++ +GF VQ IP+S + + +
Sbjct: 11 KRNAGERAAELVADGAVVGLGTGSTTAHAIRALGRRVEDGFEVQGIPTSYQSADLAREVG 70
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IPL + +D + ++IDG D I LIKG G A REK++A AA+R +++ D SK +
Sbjct: 71 IPLTTLDDAA-PAIAIDGADRIAG-FELIKGGGAAHTREKLVASAAARLVIVADPSKECE 128
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
L R +P+E+ EV G +LRL G V+D GN ++D FG
Sbjct: 129 TLDR-PVPLEVLPAARRPV----SEVVEGLGSTPDLRLAERKDGPVVTDNGNLVLDCDFG 183
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P ++ +L +IPGV+EHGLF+ + D +IGT G ++
Sbjct: 184 RIEEPADLAQKLASIPGVLEHGLFVGLADTVLIGTETG-VEERER 227
>gi|218248971|ref|YP_002374342.1| ribose-5-phosphate isomerase A [Cyanothece sp. PCC 8801]
gi|257062056|ref|YP_003139944.1| ribose-5-phosphate isomerase A [Cyanothece sp. PCC 8802]
gi|226734907|sp|B7K6D3|RPIA_CYAP8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|218169449|gb|ACK68186.1| ribose 5-phosphate isomerase [Cyanothece sp. PCC 8801]
gi|256592222|gb|ACV03109.1| ribose 5-phosphate isomerase [Cyanothece sp. PCC 8802]
Length = 237
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V +G+GTGST + + +++ +G + + +S E +
Sbjct: 11 MKQEVGKAAASRVKSDSIVGLGTGSTTAYAIEYIGERLKSGDLKNIVGVTTSFQAEVLAR 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + + + +D++IDG DE+D LIKG G A +EKI+ A FIV+ D +K
Sbjct: 71 KYGIPLTTLDVIDRIDVAIDGADEVDPNKNLIKGGGAAHTQEKIVDSLAEVFIVVVDSNK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ V + L++ G ELR+ +G V+D GN ++D
Sbjct: 131 LVDKLGSTFLLPVEVIPKAVTPVMRQLEQ----LGGKPELRMGVRKAGPVVTDQGNLVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + + NIPGV+E+GLF+ + D ++G DG+ V +
Sbjct: 187 VKFEGIDDPATLEKTINNIPGVLENGLFVGVTDIVLVGEIIDGKPSVRE 235
>gi|284167014|ref|YP_003405293.1| ribose 5-phosphate isomerase [Haloterrigena turkmenica DSM 5511]
gi|284016669|gb|ADB62620.1| ribose 5-phosphate isomerase [Haloterrigena turkmenica DSM 5511]
Length = 235
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR A RA + V DG +G+GTGST + L + +G ++ IP+S +
Sbjct: 8 DAAKRRAGERAAEDVADGFVVGLGTGSTTAYAIEALGRAVDDGLEIRGIPTSFQSRRLAL 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSR------LRLIKGYGGALLREKIIAHAASRFIV 117
I L + + V VDL+IDG D++ LIKG G A REK++ AA RF+V
Sbjct: 68 EVGIELTTLDAVEGVDLAIDGADQVADDPAADGYGALIKGGGAAHTREKLVDAAADRFVV 127
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
+ D SK L R +PIE+ +++V G LR G V+D G
Sbjct: 128 VADPSKLAPTLERS-VPIEVIPDAHTVVADRVRDV----GGEPTLREAEGKDGPVVTDNG 182
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N ++D FG I +P+ ++ L +PGV+EHGLF+ + D +GT DG V
Sbjct: 183 NLVLDCAFGSIDEPEALATRLSRLPGVVEHGLFVGLADATYVGTEDG-VEVRD 234
>gi|254527153|ref|ZP_05139205.1| ribose 5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9202]
gi|221538577|gb|EEE41030.1| ribose 5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9202]
Length = 231
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 83/220 (37%), Positives = 126/220 (57%), Gaps = 8/220 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ A AI+ V + M LG+G+GSTA + LAD+I +G ++ + +S +E
Sbjct: 1 MKKIVADAAIKEVENDMILGLGSGSTAALMIKSLADEIRSGKLQNIRGVATSFQSEVLAL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL VS +DL+IDG DE+D R +LIKG G +REK++A A+R +++ DE+K
Sbjct: 61 ELDIPLIDLASVSQIDLAIDGADEVDPRFQLIKGGGACHVREKLVASKANRLLIVVDETK 120
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V LP+E+ + +EV S + LR+ +G V+D GN I+D
Sbjct: 121 LVQNLNQSFPLPVEVLPNAWKQV----EEVISEMKGSSSLRMATKKAGPIVTDQGNLILD 176
Query: 183 AFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
FF G I +P+ I L NIPGV+E+GLF+++ D ++G
Sbjct: 177 VFFDGGIKNPKDIELSLNNIPGVLENGLFVDLTDKVLVGK 216
>gi|21594002|gb|AAM65920.1| putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
Length = 276
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 135/236 (57%), Gaps = 9/236 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A++ + GM LG+GTGSTA + + +++G + + IP+S+ TE
Sbjct: 44 SQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTE 103
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + +DL+IDG DE+D L L+KG GGALLREK++ A +FIV+
Sbjct: 104 EQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVA 163
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDG 176
D++K V LG +P+E+ QF N L L+E+ FG E +LR +G G +V+D
Sbjct: 164 DDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQELFKEFGC--ESKLRVDGDGKPYVTDN 221
Query: 177 GNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYI+D +F + D + E+ GV+EHGLF+ M II +G V+ K
Sbjct: 222 SNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNG-VEVMTK 276
>gi|300362083|ref|ZP_07058260.1| ribose-5-phosphate isomerase [Lactobacillus gasseri JV-V03]
gi|300354702|gb|EFJ70573.1| ribose-5-phosphate isomerase [Lactobacillus gasseri JV-V03]
Length = 232
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 10/236 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSS 55
MD Q+K+ AA +A V LG+GTGST F+ L ++ GF ++ ++ +S
Sbjct: 1 MDKSEQDQLKKEAATKAAMMVESDSVLGVGTGSTVAFFIDALGERKEKEGFSLKHIVTTS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
++ + + D+ DL++DG D +D L IKG GGAL EK +A + +
Sbjct: 61 NRSKKQLEGLGFKVDELADIDQADLTVDGADRVDDNLDGIKGGGGALTLEKNVAINSKKI 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I DESK V L LP+E+ + + GL + RL NG +V+
Sbjct: 121 IWIVDESKLVHHLSGFPLPVEVLP----VSAEQNFKRFEVEGLKPQWRLDNNGK-RYVTH 175
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GNYI+D P P ++ L + GV+EHGLF++M D II SDG ++
Sbjct: 176 YGNYIIDLAADPTPVPYGLADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKR 231
>gi|111657762|ref|ZP_01408483.1| hypothetical protein SpneT_02001050 [Streptococcus pneumoniae
TIGR4]
Length = 221
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 7/224 (3%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHI 67
A A +++ DGM +G+GTGSTA F+ + +I G ++ + +S T + +I
Sbjct: 1 MAGITAAEFIKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQAEGLNI 60
Query: 68 PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127
PL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DESK V+
Sbjct: 61 PLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEK 120
Query: 128 LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF 187
LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 121 LGAFKLPVEVVQYGAEQVFRHFERAGY------KPSFREKDGQRFVTDMQNFIIDLALDV 174
Query: 188 IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P EL ++ GV+EHGLF MVD I+ DG + K
Sbjct: 175 IENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSK 218
>gi|218530526|ref|YP_002421342.1| ribose 5-phosphate isomerase [Methylobacterium chloromethanicum
CM4]
gi|254808715|sp|B7L2C9|RPIA_METC4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|218522829|gb|ACK83414.1| ribose 5-phosphate isomerase [Methylobacterium chloromethanicum
CM4]
Length = 236
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 136/213 (63%), Gaps = 1/213 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A +KR AA RAI V DGM LG+GTGSTA F+ LL +++ G +V +P+S T
Sbjct: 1 MSAPDLKRAAAERAIPLVEDGMRLGIGTGSTAAAFIKLLGERVRAGLKVTGVPTSEATRI 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ IPL + ED+ +DL+IDG DE+D LRLIKG G ALLREKI+A A+ R +VI D
Sbjct: 61 ACEREGIPLATLEDLPELDLTIDGADEVDGSLRLIKGGGAALLREKIVAVASRRMVVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SK V+ LG LP+E++ FG+ T A++ + G E+ R SG ++DGG+
Sbjct: 121 ASKHVETLGAFPLPVEVNLFGIGATTRAVEAAVARAGCTGEIVRRHEASGAPLLTDGGHA 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
I+D G IPDP+ +S L +PGV+EHGLF+
Sbjct: 181 ILDLRLGRIPDPEALSAGLWAVPGVVEHGLFLG 213
>gi|82701570|ref|YP_411136.1| ribose-5-phosphate isomerase A [Nitrosospira multiformis ATCC
25196]
gi|123545066|sp|Q2YBX7|RPIA_NITMU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|82409635|gb|ABB73744.1| ribose-5-phosphate isomerase [Nitrosospira multiformis ATCC 25196]
Length = 219
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ + KR AA AIQ++ G +G+GTGSTA F+ LA I + + SS T
Sbjct: 1 MNQDEQKRAAAHAAIQHIPAGCIVGVGTGSTANYFIDALAG-IRSRID-GAVASSEATAR 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I + +V + L +DG DEI L +IKG GGAL REKI+A A +FI I D
Sbjct: 59 RLSAHGIEVMDLNNVDELPLYVDGADEITPHLHMIKGGGGALTREKIVAAVAKKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK VD LG+ LP+E+ + G LR F +D GN I
Sbjct: 119 QSKLVDVLGKFPLPVEVIPMARGHVAREIVR----LGGQPMLRQG------FTTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P + EL I G++ +GLF D ++G G +
Sbjct: 169 LDVHALQILNPIELETELNQITGIVTNGLFARRPADLLLLGDEGGIRTI 217
>gi|297538754|ref|YP_003674523.1| ribose 5-phosphate isomerase [Methylotenera sp. 301]
gi|297258101|gb|ADI29946.1| ribose 5-phosphate isomerase [Methylotenera sp. 301]
Length = 225
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 7/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K+ A +A +YV GM +G+GTGSTA F+ LA G +V + SS +
Sbjct: 1 MNDKQMVALQAAKYVKSGMLVGLGTGSTANYFIEELARLQREEGLKVTTVASSTISAITA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ ++P+ + E +SS+DL +DG DEI + L+KG G L++EK++A AAS+FI + DES
Sbjct: 61 QSLNLPIVALEQISSIDLYVDGADEITPDMTLLKGRGSDLVKEKLLARAASKFIAVADES 120
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V ++PIE+ F T K+ G LR G +V+ G+Y++
Sbjct: 121 KLVSHIGQNFVIPIEVIPFAWQLT----KKSLEAAGAKGNLRPNAAKDGFWVTSHGSYVL 176
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
D F D + ++ + N PGV+EHG+F + D I ++G
Sbjct: 177 DMTFDRSLDAKTLNDLISNTPGVVEHGIFYGLTDAVFIA-ANGLV 220
>gi|326693067|ref|ZP_08230072.1| ribose-5-phosphate isomerase A [Leuconostoc argentinum KCTC 3773]
Length = 229
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M Q K A RRA ++V + M +G+G+GST + L +++A ++ + +S T
Sbjct: 1 MTQEQQKMIAGRRAAEFVQNDMVVGIGSGSTIAHVINALGERVAHENLKIVGVATSEKTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+++ +DV +DL+IDG D+I IKG G ALL EKI+A + I +
Sbjct: 61 RNAAQLGIPMYNVDDVDQIDLTIDGADQISDDFSAIKGGGAALLWEKIVAFNSRENIWVI 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK+V L + LP+E+ +G ++ G RL +NG +D N+
Sbjct: 121 DASKQVPKLNQ-YLPVEVIPYGSHQLFKRFAAE----GFQPTWRLDQNG-NPVRTDSANF 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++D I P+ EL + GV+EHGLF ++V+ +IG D V+
Sbjct: 175 LIDLHLPMIDHPRAFGDELIKMVGVVEHGLFTDVVNRVVIGEPDDHVRVID 225
>gi|158297654|ref|XP_554756.3| AGAP011457-PA [Anopheles gambiae str. PEST]
gi|157014680|gb|EAL39480.3| AGAP011457-PA [Anopheles gambiae str. PEST]
Length = 278
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 10/237 (4%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M + K+ AA +A+ YV D +G+G+GST + +A+++ G ++ IP+S
Sbjct: 44 MSLEEAKKCAAYKAVDEYVKDNTVVGVGSGSTVVYAVHRIAERVKAEGLKLVCIPTSFQA 103
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
H + L E +D +IDG DE+D+++ LIKG GG LL+EKI+A A R +VI
Sbjct: 104 RQLIIEHGLVLGDLECNPRLDCAIDGADEVDAKMVLIKGGGGCLLQEKIVASCADRLVVI 163
Query: 119 GDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D +K R +PIE+ +V S FG +LR+ +G V+D
Sbjct: 164 ADYTKDSAKLGQQYRKGIPIEVAPMAYVPI---KGKVESRFGGTLKLRMAVAKAGPVVTD 220
Query: 176 GGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
GN+I+D F D ++ E+ IPGV++ GLF+ M A G DG
Sbjct: 221 NGNFILDWSFPADKEHDWDAVNREIMMIPGVVDTGLFVGMATKAYFGQQDGSVTERS 277
>gi|303258170|ref|ZP_07344178.1| ribose 5-phosphate isomerase A [Burkholderiales bacterium 1_1_47]
gi|302859189|gb|EFL82272.1| ribose 5-phosphate isomerase A [Burkholderiales bacterium 1_1_47]
Length = 231
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 15/231 (6%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
Q+K+ AA+ A++YVV+G LG+GTG+T F+ LA + SS T
Sbjct: 4 QNQLKQMAAKAALEYVVEGEYLGVGTGTTVGFFITELATSGKK--VKGCVSSSEATTRQL 61
Query: 63 KIHHIPLHSPED-VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ D V + + IDG DEID +IKG GGAL REKI+A A+ +F+ I DE
Sbjct: 62 LAYGIPVCDLNDIVDYLPVYIDGCDEIDGNFCMIKGGGGALTREKIVAQASEKFVCIADE 121
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG LP+E+ V+ A+++ G + +R F++D GN I+
Sbjct: 122 SKVVKQLGAFPLPLEVIPMAVSSVSRAMED----LGGHPVVRD-------FITDNGNNII 170
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
D I +PQ++ + IPGV+ G+F + D ++ + G + K
Sbjct: 171 DVHGLQIKEPQLLENAINKIPGVVTCGIFAHRGADVLLVASEAGIKVTKPK 221
>gi|76801045|ref|YP_326053.1| ribose-5-phosphate isomerase A [Natronomonas pharaonis DSM 2160]
gi|121718367|sp|Q3ITP9|RPIA_NATPD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|76556910|emb|CAI48484.1| ribose-5-phosphate epimerase [Natronomonas pharaonis DSM 2160]
Length = 225
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 76/222 (34%), Positives = 117/222 (52%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR A ++A V DGM +G+GTGSTA + L ++ G ++ IP+S + +
Sbjct: 8 EAQKRRAGKQAADAVEDGMVVGLGTGSTAAASIRELGQRVEEGLDIRGIPTSYQSRQLAR 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + E+ + D++IDG D++ + LIKG G A REK++ AA RF+V+ DE+K
Sbjct: 68 EADIPLTTLEEAT-PDVAIDGADQVAA-GDLIKGGGAAHAREKLVDAAADRFLVVADETK 125
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
L +P+E+ + G LR G V+D GN ++D
Sbjct: 126 LSPTLD-IPVPVEVLPDAAPVVQRQ----VAALGGEPTLRAAERKDGPVVTDNGNLVIDC 180
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
FG I +P ++ EL +PG +EHGLF+ + D ++GT DG
Sbjct: 181 AFGEIAEPAALAEELSALPGAVEHGLFVGLADEILVGTDDGV 222
>gi|167647507|ref|YP_001685170.1| ribose-5-phosphate isomerase A [Caulobacter sp. K31]
gi|189043809|sp|B0T734|RPIA_CAUSK RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|167349937|gb|ABZ72672.1| ribose 5-phosphate isomerase [Caulobacter sp. K31]
Length = 226
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 92/229 (40%), Positives = 134/229 (58%), Gaps = 4/229 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A KR + A + V GM +G+GTGSTA F+ LA + ++ +P+S T N
Sbjct: 1 MSADDQKRISGEAAAELVEAGMVVGLGTGSTAAWFVKALAAR---KLDIRGVPTSEATAN 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I L + +DV S+DL++DG DEI L LIKG G ALLREK++ A+ R +VI D
Sbjct: 58 LARELGIALTALDDVKSIDLTVDGADEIGPGLSLIKGGGAALLREKLVWEASKRCVVIAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V LG+ LPIE+ +FG T L ++A+ F L RLR G+ V+DGGN I
Sbjct: 118 AAKHVKTLGKFPLPIEVVRFGHVHTGQRLADIAAEFDLLP-PRLRMADRGVVVTDGGNVI 176
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
D G I +P ++ L + GV++HGLF+++ D A++GT G ++
Sbjct: 177 YDMPSGVIAEPAALAAALKTVTGVVDHGLFLDLADEALLGTDQGVVKLV 225
>gi|322513332|ref|ZP_08066452.1| ribose 5-phosphate isomerase [Actinobacillus ureae ATCC 25976]
gi|322120886|gb|EFX92740.1| ribose 5-phosphate isomerase [Actinobacillus ureae ATCC 25976]
Length = 219
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA+ A+Q+V +G+G+GST F+ LA + +S+ +E
Sbjct: 1 MTQQEMKKIAAQAALQFVKPDTIVGVGSGSTVNRFIDALASM--KDQIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + +V +D+ IDG DEI + +IKG G AL REKI++ A +FI I D
Sbjct: 59 RLRAIGIEVFNANEVIELDVYIDGADEITPQGAMIKGGGAALTREKIVSSLAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT +G ++
Sbjct: 169 ILDVHNFQILEPLKMEHTINNIAGVVTNGIFAQRYANVTIVGTPEGAKII 218
>gi|312115057|ref|YP_004012653.1| ribose 5-phosphate isomerase [Rhodomicrobium vannielii ATCC 17100]
gi|311220186|gb|ADP71554.1| ribose 5-phosphate isomerase [Rhodomicrobium vannielii ATCC 17100]
Length = 241
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 138/226 (61%), Gaps = 2/226 (0%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
D +KR AA A+++V GM LG+GTGSTA F+ LLA+++ + + +S T+
Sbjct: 3 DIQNLKREAAAEALKFVEPGMVLGLGTGSTASAFIELLAERLKTEDLDLTCVATSEQTKR 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
F + I + ++ VDL+IDG DEID +L L+KG GGALLREKI+A A+ R I+I D
Sbjct: 63 FAEERGIKIADFNTIADVDLTIDGADEIDPQLNLLKGGGGALLREKIVAFASDRVIIIAD 122
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SK V+ LG LP+EI FGV TL+ ++ A G + LRR SG F +DGG+
Sbjct: 123 ASKYVEQLGEFPLPVEIVDFGVAATLAMIEAAAEDAGCQGSIALRRTASGDTFRTDGGHL 182
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
I D FG IPDP+ ++ L +PGV+EHGLFI + D + DG
Sbjct: 183 IADCAFGSIPDPETLADLLDIVPGVVEHGLFIGIADDIFLAAPDGV 228
>gi|303275155|ref|XP_003056876.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461228|gb|EEH58521.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 250
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 128/237 (54%), Gaps = 11/237 (4%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
++K+ +++ +V GM +G+GTGSTA + L KIA+G + IP+S T
Sbjct: 4 TQDELKKLVGYKSVDDHVESGMVVGLGTGSTAYFAVERLGQKIASGELTDIVAIPTSVRT 63
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + + S +D++IDG DE+D L L+KG GGALLREK++ A +F+VI
Sbjct: 64 KEQAESLKIPLCTLNEKSILDVAIDGADEVDPDLALVKGGGGALLREKMVEVMAKKFVVI 123
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR------RNGSGL 171
DESK LP+EI F TL + ++ S G LR+ +G +
Sbjct: 124 VDESKLCKGLGPGFPLPVEITPFCHMHTLRTIADLPSVKGCEAVLRMGSSSTNKPDGDEI 183
Query: 172 FVSDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
V+D GNYIVD F I D + EL N GV++HGLF+ M I+ SDG +
Sbjct: 184 AVTDNGNYIVDLHFKEPIKDVNAAASELKNTVGVVDHGLFVGMSYQVIVAGSDGIKV 240
>gi|73541756|ref|YP_296276.1| ribose-5-phosphate isomerase A [Ralstonia eutropha JMP134]
gi|123624699|sp|Q46ZK1|RPIA_RALEJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|72119169|gb|AAZ61432.1| ribose-5-phosphate isomerase [Ralstonia eutropha JMP134]
Length = 228
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A + F V S
Sbjct: 1 MTQDELKALVAQAAADYVKQEVPEGAVLGVGTGSTANLFIDAVAA-FKDRFAGAVSSSEA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+T + H + +V + + +DG DEID+ +IKG GGAL REKI+A A RF+
Sbjct: 60 STRRL-QQHGFKVLDLNEVDDIPVYVDGADEIDASGAMIKGGGGALTREKIVASVAGRFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ +G LP+E+ + + G LR+ ++G G++ +D
Sbjct: 119 CIADGSKLVETMGAFPLPVEVIPMARAA----VARQVAALGGQPRLRMNKDG-GIYKTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
GN I+D I DP+ + + IPGV+ GLF + + ++GT +G
Sbjct: 174 GNVILDVSGLKITDPRGLEQSINQIPGVVTVGLFALRGANVLLLGTGEGVQRT 226
>gi|299782843|gb|ADJ40841.1| Ribose 5-phosphate isomerase A [Lactobacillus fermentum CECT 5716]
Length = 228
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 122/230 (53%), Gaps = 7/230 (3%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNT 58
M+ +K+ + A + V +GM +G+GTGST + + L ++ G + + +S T
Sbjct: 1 MNQQDSLKQLVGQTAAKLVKNGMIVGLGTGSTVRFLVDALGKRVQEEGLAITGVTTSNRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
I + +DV VDL+IDG DE+D IKG GGALL EKI+ A++ + I
Sbjct: 61 TAQATSLGIKIVDLDDVDHVDLTIDGADEVDRDFYGIKGGGGALLWEKIVNDASTNNVWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD +G +P+E+ FG +K + + G + R G L+ +D N
Sbjct: 121 VDQSKVVDRIGAFGVPVEVIPFGASKVFAKFEHQ----GYQPQWRTDEAG-QLYRTDENN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
YI+D G + DP ++ +L N GV+EHGLF+N V+ I+G G +
Sbjct: 176 YIIDLKLGPLTDPLALAEDLINTVGVVEHGLFLNRVNQVIVGNEAGITTL 225
>gi|221213040|ref|ZP_03586016.1| ribose 5-phosphate isomerase A [Burkholderia multivorans CGD1]
gi|221167253|gb|EED99723.1| ribose 5-phosphate isomerase A [Burkholderia multivorans CGD1]
Length = 250
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 20 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 78
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + +V S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 79 TTERL-KSHGIAVFDLNEVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 137
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 138 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 192
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT G ++
Sbjct: 193 GNEILDVKGLQIADPRGFEAQVNAWPGVVTVGLFAARGANLCLLGTEHGVETIV 246
>gi|116516446|ref|YP_816216.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae D39]
gi|148986057|ref|ZP_01819078.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP3-BS71]
gi|148990336|ref|ZP_01821522.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP6-BS73]
gi|148992494|ref|ZP_01822189.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP9-BS68]
gi|149004466|ref|ZP_01829191.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP14-BS69]
gi|149007230|ref|ZP_01830894.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP18-BS74]
gi|149010544|ref|ZP_01831915.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP19-BS75]
gi|149021693|ref|ZP_01835724.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP23-BS72]
gi|168485776|ref|ZP_02710284.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC1087-00]
gi|168489795|ref|ZP_02713994.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae SP195]
gi|168490919|ref|ZP_02715062.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC0288-04]
gi|168492983|ref|ZP_02717126.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC3059-06]
gi|168575486|ref|ZP_02721422.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae MLV-016]
gi|194397227|ref|YP_002037464.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae G54]
gi|225856494|ref|YP_002738005.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae P1031]
gi|225858629|ref|YP_002740139.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae 70585]
gi|225861275|ref|YP_002742784.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
Taiwan19F-14]
gi|237650818|ref|ZP_04525070.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae CCRI 1974]
gi|237821576|ref|ZP_04597421.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae CCRI
1974M2]
gi|298230608|ref|ZP_06964289.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254381|ref|ZP_06977967.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|303254034|ref|ZP_07340152.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS455]
gi|303260292|ref|ZP_07346263.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP-BS293]
gi|303261498|ref|ZP_07347446.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
SP14-BS292]
gi|303264166|ref|ZP_07350087.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS397]
gi|303267032|ref|ZP_07352904.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS457]
gi|303269206|ref|ZP_07354983.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS458]
gi|307067425|ref|YP_003876391.1| ribose 5-phosphate isomerase [Streptococcus pneumoniae AP200]
gi|30173273|sp|Q8DQD1|RPIA_STRR6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|122278898|sp|Q04L82|RPIA_STRP2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238690811|sp|B5E3K1|RPIA_STRP4 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808721|sp|C1C6G3|RPIA_STRP7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808725|sp|C1CJR7|RPIA_STRZP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808726|sp|C1CS62|RPIA_STRZT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|116077022|gb|ABJ54742.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae D39]
gi|147757614|gb|EDK64634.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP14-BS69]
gi|147761268|gb|EDK68235.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP18-BS74]
gi|147765025|gb|EDK71954.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP19-BS75]
gi|147921891|gb|EDK73017.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP3-BS71]
gi|147924365|gb|EDK75456.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP6-BS73]
gi|147928811|gb|EDK79824.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP9-BS68]
gi|147930154|gb|EDK81140.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP23-BS72]
gi|183570956|gb|EDT91484.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC1087-00]
gi|183571855|gb|EDT92383.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae SP195]
gi|183574786|gb|EDT95314.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC0288-04]
gi|183576945|gb|EDT97473.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC3059-06]
gi|183578560|gb|EDT99088.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae MLV-016]
gi|194356894|gb|ACF55342.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae G54]
gi|225720856|gb|ACO16710.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae 70585]
gi|225724898|gb|ACO20750.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae P1031]
gi|225727571|gb|ACO23422.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
Taiwan19F-14]
gi|301793972|emb|CBW36369.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae INV104]
gi|301799829|emb|CBW32400.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae OXC141]
gi|301801661|emb|CBW34361.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae INV200]
gi|302599014|gb|EFL66042.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS455]
gi|302637632|gb|EFL68119.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
SP14-BS292]
gi|302638616|gb|EFL69080.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP-BS293]
gi|302641270|gb|EFL71640.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS458]
gi|302643426|gb|EFL73701.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS457]
gi|302646571|gb|EFL76797.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae BS397]
gi|306408962|gb|ADM84389.1| Ribose 5-phosphate isomerase [Streptococcus pneumoniae AP200]
Length = 227
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 124/229 (54%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRHFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P EL ++ GV+EHGLF MVD I+ DG + K
Sbjct: 176 LALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSK 224
>gi|168484733|ref|ZP_02709685.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC1873-00]
gi|172042110|gb|EDT50156.1| ribose 5-phosphate isomerase A [Streptococcus pneumoniae
CDC1873-00]
Length = 227
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGADQVFRHFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P EL ++ GV+EHGLF MVD I+ DG + K
Sbjct: 176 LALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSK 224
>gi|116490273|ref|YP_809817.1| ribose-5-phosphate isomerase A [Oenococcus oeni PSU-1]
gi|118587120|ref|ZP_01544549.1| ribose 5-phosphate isomerase A [Oenococcus oeni ATCC BAA-1163]
gi|290889659|ref|ZP_06552748.1| hypothetical protein AWRIB429_0138 [Oenococcus oeni AWRIB429]
gi|116090998|gb|ABJ56152.1| ribose-5-phosphate isomerase [Oenococcus oeni PSU-1]
gi|118432399|gb|EAV39136.1| ribose 5-phosphate isomerase A [Oenococcus oeni ATCC BAA-1163]
gi|290480656|gb|EFD89291.1| hypothetical protein AWRIB429_0138 [Oenococcus oeni AWRIB429]
Length = 233
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 10/233 (4%)
Query: 1 MD---ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSR 56
MD ++K+ AAR+A YV +GM +G+G+GST K + L ++ + + +S
Sbjct: 1 MDAELQNKLKKEAARKAASYVKNGMVVGLGSGSTVKMLVDELGRRVKEEDLQFTGVATSI 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K I + + V S+DL+IDG D++DS IKG GG LL EKI+A + + +
Sbjct: 61 FTAQQAKSLGIKIVDLDMVDSIDLTIDGADQVDSNFNGIKGGGGNLLWEKIVAINSKKIV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
+ D+SK VD +G L +++ FG + + G LRL + G F +D
Sbjct: 121 WVVDKSKVVDTIGAFPLAVDVIPFGSQHVM----QNFDKAGYEPVLRLDKEGK-PFKTDS 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
N I+D I +P ++ L GV+EHGLF+NMV ++G G+ +L
Sbjct: 176 NNLIIDLHLHKIEEPTQLADNLIQTVGVVEHGLFLNMVSEVVVGKE-GQPEIL 227
>gi|329117646|ref|ZP_08246363.1| ribose 5-phosphate isomerase A [Streptococcus parauberis NCFD 2020]
gi|326908051|gb|EGE54965.1| ribose 5-phosphate isomerase A [Streptococcus parauberis NCFD 2020]
Length = 226
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+K+ A A Q+V DGMT+G+GTGSTA F+ + +I G +V + +S T
Sbjct: 2 EALKKQAGVTAAQFVTDGMTVGLGTGSTAYFFVEEIGRRIKDEGLQVVGVTTSSATTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL + +D+ S+D+++DG DE+D IKG G ALL EKI+A +I + DES
Sbjct: 62 EGLGIPLKAVDDIDSIDVTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G ++ ++ + R + ++D NYI+D
Sbjct: 122 KMVEHLGAFKLPVEVIQYGADRLFRVFEKAGY------KPSFRVKENQRLITDMKNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
G I P + L GV+EHGLF MV+ I+ DG VL+
Sbjct: 176 LDLGKIEKPFEFAEMLDKTVGVVEHGLFNGMVNKVIVAGKDG-VKVLE 222
>gi|319942244|ref|ZP_08016559.1| ribose-5-phosphate isomerase [Sutterella wadsworthensis 3_1_45B]
gi|319804117|gb|EFW01017.1| ribose-5-phosphate isomerase [Sutterella wadsworthensis 3_1_45B]
Length = 225
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 117/227 (51%), Gaps = 14/227 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++KR AR A+ YV G LG+GTGST + + L + I + V S R+T+
Sbjct: 8 SQSELKRLVARAALDYVESGAVLGVGTGSTVDQLIDQLPE-IRDRIPACVSSSERSTKRL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +V S+ + IDG DEID +IKG GGAL REKI+A + RF+ I D
Sbjct: 67 EAL-GFKVLDMNEVDSIGVYIDGADEIDGHFAMIKGGGGALTREKIVASISRRFVCIADA 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+VD LGR LP+E+ +K G + +LR FV+D G I+
Sbjct: 126 SKKVDVLGRFPLPVEVIPMA----AREIKRRLEALGADVKLRD-------FVTDNGCSIL 174
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
DA I DPQ + E+ + PGV+ GLF D ++GTS+G
Sbjct: 175 DAAGLEIRDPQGLETEINSWPGVVTVGLFAARGADVLLLGTSEGVKT 221
>gi|15229349|ref|NP_187130.1| ribose 5-phosphate isomerase-related [Arabidopsis thaliana]
gi|6175179|gb|AAF04905.1|AC011437_20 putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
gi|12322865|gb|AAG51427.1|AC009465_27 putative ribose 5-phosphate isomerase; 91580-90750 [Arabidopsis
thaliana]
gi|15027857|gb|AAK76459.1| putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
gi|23296784|gb|AAN13169.1| putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
gi|332640615|gb|AEE74136.1| ribose 5-phosphate isomerase A [Arabidopsis thaliana]
Length = 276
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 88/236 (37%), Positives = 135/236 (57%), Gaps = 9/236 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A++ + GM LG+GTGSTA + + +++G + + IP+S+ TE
Sbjct: 44 SQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTE 103
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + +DL+IDG DE+D L L+KG GGALLREK++ A +FIV+
Sbjct: 104 EQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVA 163
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDG 176
D++K V LG +P+E+ QF N L L+++ FG E +LR +G G +V+D
Sbjct: 164 DDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGC--ESKLRVDGDGKPYVTDN 221
Query: 177 GNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYI+D +F + D + E+ GV+EHGLF+ M II +G V+ K
Sbjct: 222 SNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNG-VEVMTK 276
>gi|33241093|ref|NP_876035.1| ribose 5-phosphate isomerase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|41017661|sp|Q7VA25|RPIA_PROMA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33238622|gb|AAQ00688.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 237
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 11/236 (4%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK A+ AI + DGM LG+G+GSTA + L +K+ G + +P+S E
Sbjct: 5 QTQMKIAVAQEAIGEIKDGMILGLGSGSTAALMIKSLGEKLKEGSLKEIIGVPTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + VS +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 LASQLGIPLRAFSAVSKIDLAIDGADEVDPNFQLIKGGGACHVQEKLVASIADRFVVVVD 124
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K V+ LP+E+ ++ + G +LR+ +G V+D GN
Sbjct: 125 STKIVEKLNLEFKLPVEVLPAAWKLV----QKELNDLGAKSDLRMAEKKAGPIVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLV--LQK 231
++D F I DPQ + ++ N PGV+E+GLF+N+ D ++G +G V L+K
Sbjct: 181 VLDVQFADGISDPQNLEKQINNFPGVLENGLFVNLTDEVLVGEIKNGVSSVNRLKK 236
>gi|238027541|ref|YP_002911772.1| ribose-5-phosphate isomerase A [Burkholderia glumae BGR1]
gi|237876735|gb|ACR29068.1| Ribose 5-phosphate isomerase [Burkholderia glumae BGR1]
Length = 231
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA I +R + SS
Sbjct: 1 MTQDELKRLVGQAAADYVLANVPEGSVIGVGTGSTANCFIDALAA-IKTRYR-GAVSSSI 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T H I + + + + +DG DEID+ +IKG GGAL REKI+A ++ F+
Sbjct: 59 ATTQRLASHGIRVFDLNQIDGLQVYVDGADEIDASGAMIKGGGGALTREKIVASVSATFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LP+E+ + G LR+ +++D
Sbjct: 119 CIADASKRVATLGAFPLPVEVVPMARTAIGRR----LTALGGVPVLRV-TGDGTPYLTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I DP+ + + PGV+ GLF D ++G G +
Sbjct: 174 GNEILDVKGLAITDPRGLEATVNGWPGVVTVGLFAQRGADLCLLGGPAGVETI 226
>gi|116617306|ref|YP_817677.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|227432953|ref|ZP_03914895.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|116096153|gb|ABJ61304.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|227351299|gb|EEJ41583.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 228
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 125/228 (54%), Gaps = 7/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
K A RRA +V DGM +G+G+GST + + L +++A ++ +P+S T
Sbjct: 4 SQDLQKIIAGRRAADFVQDGMVVGIGSGSTIAQVITALGERVANENLKIVGVPTSEKTRR 63
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IP+++ +DV +DL+IDG D+I IKG G ALL EKI+A + I + D
Sbjct: 64 NAAKLGIPMYNVDDVDKIDLTIDGADQISDDFSAIKGGGAALLWEKIVAFNSRENIWVVD 123
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SKRV L + LP+EI +G ++ + G + RL +NG +D NY+
Sbjct: 124 SSKRVSKLNQ-YLPVEIIPYGSDQLFKRF----TADGFHPTWRLDQNG-NPVRTDSANYL 177
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D I DP+ + EL N+ GV+EHGLF ++V+ +IG+ DG ++
Sbjct: 178 IDLHVPVIEDPRDLGQELINMVGVVEHGLFTDVVNRVVIGSDDGVEII 225
>gi|242014479|ref|XP_002427917.1| Ribose-5-phosphate isomerase, putative [Pediculus humanus corporis]
gi|212512401|gb|EEB15179.1| Ribose-5-phosphate isomerase, putative [Pediculus humanus corporis]
Length = 300
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 10/233 (4%)
Query: 2 DALQMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
+ K+ AA A+ +V + +G+G+GST + LAD+I + IP+S E
Sbjct: 68 TVEEAKKCAAHSAVVNHVKNNSIVGIGSGSTVVYAVEKLADRIKNEKLHIICIPTSFQAE 127
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + L S +D+ IDG DE+D L LIKG GG LL+EKIIA + IVI
Sbjct: 128 QLITENKLNLGSLSQYPEIDVVIDGADEVDENLTLIKGGGGCLLQEKIIASCSKEMIVIA 187
Query: 120 DESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
D +K+ L + +PIE+ F + ++ FG LR+ + +G V+D
Sbjct: 188 DFNKKSKKLGEKWKKGVPIEVIPFCYVPIKNKIQ---LKFGGEAVLRMAKMKAGPVVTDN 244
Query: 177 GNYIVDAFFGFIPD--PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GN+I+D F D + IS +L IPGV+E GLF+NM A G SDG +
Sbjct: 245 GNFILDWKFPENKDYNWEKISVDLKLIPGVVETGLFVNMAKKAYFGMSDGSVV 297
>gi|315127458|ref|YP_004069461.1| ribose-5-phosphate isomerase A [Pseudoalteromonas sp. SM9913]
gi|315015972|gb|ADT69310.1| ribose-5-phosphate isomerase A [Pseudoalteromonas sp. SM9913]
Length = 217
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA A+++V + +G+GTGST F+ L + + V S +T
Sbjct: 1 MTQDELKKAAAWAALEFVKENTIVGVGTGSTVNHFIDALG-TVKDTIVGAVSSSEASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV ++D+ +DG DEI++ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 L-KELGIEVFELNDVDALDVYVDGADEINALNEMIKGGGAALTREKIVAAVAKQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 DTKLVDTLGDFPLPVEVIPMARSYVARE----LLKLGGDPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDG 224
+D I + + ++ I GV+ +GLF D IIGT +G
Sbjct: 169 LDVHNLKITHAKQLETQINQIVGVVTNGLFAERGADKVIIGTKNG 213
>gi|110669529|ref|YP_659340.1| ribose-5-phosphate isomerase A [Haloquadratum walsbyi DSM 16790]
gi|121687048|sp|Q18E67|RPIA_HALWD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|109627276|emb|CAJ53766.1| ribose-5-phosphate epimerase [Haloquadratum walsbyi DSM 16790]
Length = 236
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 5/222 (2%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ KR A +A++YV DG +G+GTGSTA + L D +A G+ + +P+S T +
Sbjct: 8 EEQKRRAGEKAVEYVNDGDIVGLGTGSTAAAAIDALGDAVAAGYDIHGVPTSFATRDRAI 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL E V +D++IDG DEI++ L LIKG G A REK+I A +FIV+ DESK
Sbjct: 68 EAGIPLTRIEAVDHIDVAIDGSDEINNNLTLIKGGGAAHAREKVIDATADQFIVVADESK 127
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ L +P+ K G LR G ++D GN + D
Sbjct: 128 LVETLSE-PVPVSTLPMAQKPV----KHRLDSLGATTTLRSATMKDGPVITDNGNIVFDC 182
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
FG I + + ++ L IPG + HGLF+N+ D A IGT +G
Sbjct: 183 AFGHIENAEALAKSLAEIPGTVAHGLFVNLADVACIGTENGT 224
>gi|170698707|ref|ZP_02889773.1| ribose 5-phosphate isomerase [Burkholderia ambifaria IOP40-10]
gi|170136411|gb|EDT04673.1| ribose 5-phosphate isomerase [Burkholderia ambifaria IOP40-10]
Length = 230
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 120/234 (51%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSLA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + +V S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTQDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT++G ++
Sbjct: 174 GNEIIDVKGLQIADPRGFEAQVNAWPGVVTAGLFAERGANLCLLGTANGVETIV 227
>gi|258543376|ref|YP_003188809.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-01]
gi|256634454|dbj|BAI00430.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-01]
gi|256637512|dbj|BAI03481.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-03]
gi|256640564|dbj|BAI06526.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-07]
gi|256643621|dbj|BAI09576.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-22]
gi|256646676|dbj|BAI12624.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-26]
gi|256649729|dbj|BAI15670.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-32]
gi|256652717|dbj|BAI18651.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655773|dbj|BAI21700.1| ribose 5-phosphate isomerase A [Acetobacter pasteurianus IFO
3283-12]
Length = 237
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 123/225 (54%), Gaps = 8/225 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIH 65
K+ AA +A V DGM +G+GTGSTAK + L ++ G R++ IP+S TE K
Sbjct: 13 KQQAAIKAASLVQDGMAVGLGTGSTAKFVVAELGRRVREEGLRIRAIPTSSVTEKQAKEE 72
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL + + +D++IDG DEI+ R LIKG GGALL EKI+A AA +F+V+ D SK
Sbjct: 73 GIPLTTFGEQPELDIAIDGADEIEPRTLNLIKGLGGALLWEKIVASAAKQFVVVADASKY 132
Query: 125 VDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
VD + LP+E+ FG L E+ R +++D N I+D
Sbjct: 133 VDHLGAKCPLPVEVIPFGWENVARQLGEL-----GAHVTPRRNRDGSFYLTDEKNLIMDC 187
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
FG + +P+ + + I GV+EHGLF++M I +G ++
Sbjct: 188 VFGPMMEPEKLGRSILEIVGVVEHGLFLHMACQTITAGPEGIRIL 232
>gi|297828984|ref|XP_002882374.1| hypothetical protein ARALYDRAFT_896526 [Arabidopsis lyrata subsp.
lyrata]
gi|297328214|gb|EFH58633.1| hypothetical protein ARALYDRAFT_896526 [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 7/235 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A++ + GM LG+GTGSTA + + +++G + + IP+S+ TE
Sbjct: 44 SQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTE 103
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + + +DL+IDG DE+D L L+KG GGALLREK++ A +FIV+
Sbjct: 104 EQARSLGIPLVALDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVAEKFIVVA 163
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D++K V LG +P+E+ QF N L L+++ FG + +LR+ +G +V+D
Sbjct: 164 DDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCDAKLRVDGDGK-PYVTDNS 222
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYI+D +F + D + E+ GV+EHGLF+ M II +G V+ K
Sbjct: 223 NYIIDLYFKNPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNG-VQVMTK 276
>gi|161524856|ref|YP_001579868.1| ribose-5-phosphate isomerase A [Burkholderia multivorans ATCC
17616]
gi|160342285|gb|ABX15371.1| ribose 5-phosphate isomerase [Burkholderia multivorans ATCC 17616]
Length = 235
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 5 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 63
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + +V S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 64 TTERL-KSHGIKVFDLNEVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 122
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 123 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT G ++
Sbjct: 178 GNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAARGANLCLLGTEHGVETIV 231
>gi|119468967|ref|ZP_01611992.1| ribose-5-phosphate isomerase A [Alteromonadales bacterium TW-7]
gi|119447619|gb|EAW28886.1| ribose-5-phosphate isomerase A [Alteromonadales bacterium TW-7]
Length = 217
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 13/225 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA A+++V + +G+GTGST F+ L + + V S +T
Sbjct: 1 MTQDELKKAAAWAALEFVKENTIVGVGTGSTVNHFIDALG-TVKDTLVGAVSSSEASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + D+ +D+ IDG DEI+++ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 L-KELGIEVFELNDIDVLDVYIDGADEINAQNEMIKGGGAALTREKIVAAVAKQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 DTKLVDTLGEFPLPVEVIPMARSYVARE----LLKLGGDPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDG 224
+D + I + + + ++ I GV+ +GLF D IIGT +G
Sbjct: 169 LDVYNLNITNAKQLETDINQIVGVVTNGLFAMRGADKVIIGTKNG 213
>gi|327401202|ref|YP_004342041.1| Ribose-5-phosphate isomerase A [Archaeoglobus veneficus SNP6]
gi|327316710|gb|AEA47326.1| Ribose-5-phosphate isomerase A [Archaeoglobus veneficus SNP6]
Length = 224
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 79/220 (35%), Positives = 116/220 (52%), Gaps = 8/220 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K NAA++A++ V DG +G+G+G+T + F+ L +I G V +PSS + +
Sbjct: 5 KANAAKKAVELVRDGAVIGIGSGTTVEIFLRELGRRIENEGLTVYGVPSSYQSHILATNN 64
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
I + +D+ IDG D++D R IKG GGAL REKI+A A+ ++I D SK V
Sbjct: 65 GIKVVDLIQYPELDICIDGADQVDERFNCIKGGGGALTREKIVAAASKEVVIIVDSSKIV 124
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
D L +PIE+ F L + LR G V+D GN+I+D F
Sbjct: 125 DRL-NMPVPIEVLPFAYGFVERRLSAM-----GRPVLREGSGKLGPVVTDNGNFIIDCDF 178
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDG 224
G I P+ + E+ IPGV+E G+F + ++D I G DG
Sbjct: 179 GDIDKPEELEREIDRIPGVVECGIFCSELIDGVIAGYEDG 218
>gi|300704397|ref|YP_003746000.1| ribose-5-phosphate isomerase a (phosphoriboisomerase a) (pri)
[Ralstonia solanacearum CFBP2957]
gi|299072061|emb|CBJ43393.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Ralstonia solanacearum CFBP2957]
Length = 228
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID +IKG GGAL REKI+A A +F+
Sbjct: 59 ASTRRLQGHGFAVLDLNEVDTIPVYVDGADEIDDTGAMIKGGGGALTREKIVASVAGQFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG LP+E+ + G LR+ + G ++ +D
Sbjct: 119 CIADGSKLVDVLGAFPLPVEVVPMARAAVARQ----LAALGGQPRLRMTKEG-QIYQTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I +P+ + ++ +IPGV+ GLF + ++GT G
Sbjct: 174 GNVILDVVGLRIGEPKTLEAQINDIPGVVTVGLFAKRGANVLLLGTETGV 223
>gi|307729460|ref|YP_003906684.1| ribose 5-phosphate isomerase [Burkholderia sp. CCGE1003]
gi|307583995|gb|ADN57393.1| ribose 5-phosphate isomerase [Burkholderia sp. CCGE1003]
Length = 231
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV +G +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDELKQLVGQAAADYVLANVPEGSIIGVGTGSTANCFIDALAANKAR--YRGAVSSSL 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H + ++ S+ + +DG DEID +IKG GGAL REKI+A + F+
Sbjct: 59 ATTARLQSHGFKVLDLNEIDSLPVYVDGADEIDHGGAMIKGGGGALTREKIVASVSEVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LPIE+ + G +R+ + G+ F++D
Sbjct: 119 CIADASKLVQTLGNFPLPIEVVPMARTAIGRR----VTALGGVPVVRVTKEGA-PFITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I +P+ + + PGV+ GLF D ++GT G +
Sbjct: 174 GNEIIDVKGLSISEPRTLETHINAWPGVVTVGLFAGRGADLCLLGTDTGVQTI 226
>gi|189350394|ref|YP_001946022.1| ribose-5-phosphate isomerase A [Burkholderia multivorans ATCC
17616]
gi|189334416|dbj|BAG43486.1| ribose 5-phosphate isomerase A [Burkholderia multivorans ATCC
17616]
Length = 231
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + +V S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT G ++
Sbjct: 174 GNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAARGANLCLLGTEHGVETIV 227
>gi|240138885|ref|YP_002963360.1| Ribose-5-phosphate isomerase A [Methylobacterium extorquens AM1]
gi|240008857|gb|ACS40083.1| Ribose-5-phosphate isomerase A [Methylobacterium extorquens AM1]
Length = 236
Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A +KR AA RAI V DGM LG+GTGSTA F+ LL +++ G +V +P+S T
Sbjct: 1 MSAPDLKRAAAERAIPLVEDGMRLGIGTGSTAAAFIKLLGERVRAGLKVTGVPTSEATRI 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ IPL + ED+ +DL+IDG DE+D LRLIKG G ALLREKI+A A+ R +VI D
Sbjct: 61 ACEREGIPLATLEDLPELDLTIDGADEVDGSLRLIKGGGAALLREKIVAVASHRMVVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SK V+ LG LP+E++ FG+ T A++ + G E+ R + SG ++DGG+
Sbjct: 121 ASKHVETLGAFPLPVEVNLFGIGATTRAVEAAVARAGCTGEIVRRHDASGAPLLTDGGHA 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFI 211
I+D G IPDP+ +S L +PGV+EHGLF+
Sbjct: 181 ILDLRLGRIPDPEALSAGLWAVPGVVEHGLFL 212
>gi|134295620|ref|YP_001119355.1| ribose-5-phosphate isomerase A [Burkholderia vietnamiensis G4]
gi|166200040|sp|A4JE17|RPIA_BURVG RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|134138777|gb|ABO54520.1| ribose-5-phosphate isomerase [Burkholderia vietnamiensis G4]
Length = 230
Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ ++ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIDALQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADGSKRVPVLGAFPLPIEVVPMARTAIGRR----VAALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I +P+ ++ PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEIIDVKGLQIAEPRAFEAKVNAWPGVVTVGLFAERGANLCLLGTENGVETII 227
>gi|296114551|ref|ZP_06833204.1| ribose-5-phosphate isomerase A [Gluconacetobacter hansenii ATCC
23769]
gi|295978907|gb|EFG85632.1| ribose-5-phosphate isomerase A [Gluconacetobacter hansenii ATCC
23769]
Length = 234
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 91/222 (40%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR AA A V +GM +G+G+GST+ + L + A G R IP+S ++ +
Sbjct: 11 KLKRQAAIEAASMVQEGMVVGLGSGSTSAYMIEELGRRWAEGLRFCAIPTSEHSAEQARA 70
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H I L + +D+ IDG DE++ L LIKG GGAL REKI+A A+ RF+V+ DESK
Sbjct: 71 HGIKLVTFASHPQIDIDIDGADEVELGTLNLIKGLGGALFREKIVAAASRRFVVVVDESK 130
Query: 124 RVDFLGRG-MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V+ LG +P+E+ FG T ++ G RL R+G LFV+DGGN I+D
Sbjct: 131 LVEHLGHHVPVPVEVTTFGWESTARQIE----ALGARITQRLDRSG-NLFVTDGGNMILD 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
FG I D +S L I GVIE GLFI I+ DG
Sbjct: 186 CHFGAITDSVALSRRLRAIVGVIETGLFIGRTSEVIVAAHDG 227
>gi|221197833|ref|ZP_03570879.1| ribose 5-phosphate isomerase A [Burkholderia multivorans CGD2M]
gi|221204609|ref|ZP_03577626.1| ribose 5-phosphate isomerase A [Burkholderia multivorans CGD2]
gi|221175466|gb|EEE07896.1| ribose 5-phosphate isomerase A [Burkholderia multivorans CGD2]
gi|221181765|gb|EEE14166.1| ribose 5-phosphate isomerase A [Burkholderia multivorans CGD2M]
Length = 231
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + +V S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIAVFDLNEVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT G ++
Sbjct: 174 GNEILDVKGLQIADPRGFEAQVNAWPGVVTVGLFAARGANLCLLGTEHGVETIV 227
>gi|282890558|ref|ZP_06299081.1| hypothetical protein pah_c022o150 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499555|gb|EFB41851.1| hypothetical protein pah_c022o150 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 227
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 7/226 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K A R A Q++ GM +G+GTG+T F+ L + G R+Q + SS + +
Sbjct: 8 AKEAAGRTAAQFIESGMLVGLGTGTTTHCFIEALGKRCQEGLRIQALASSERSATLAREQ 67
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + V+ +D+++DG D+ID + R+IKG GGALLREKI+A + +VI D SK V
Sbjct: 68 KIPLLQTDQVTYLDITVDGADQIDPQKRMIKGGGGALLREKILASISKEMVVIVDSSKVV 127
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+ G LP+E+ F T+ + G + LR G +VSD GNYI D
Sbjct: 128 EQFGSFPLPVEMVTFAYQATIKK----LNALGYTGK--LREKGGIPYVSDNGNYIFDISL 181
Query: 186 -GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
P+ + ++ IPGV+E G F + +IG DG +
Sbjct: 182 PKPCLTPEKENQQIRAIPGVVETGFFFGLAGRVLIGFPDGRVEIRS 227
>gi|242069979|ref|XP_002450266.1| hypothetical protein SORBIDRAFT_05g002760 [Sorghum bicolor]
gi|241936109|gb|EES09254.1| hypothetical protein SORBIDRAFT_05g002760 [Sorghum bicolor]
Length = 260
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 98/243 (40%), Positives = 131/243 (53%), Gaps = 13/243 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA+++V GMTLG+GTGSTA + L D + G V +P+S TE
Sbjct: 16 TQDELKRVAAHRAVEFVEPGMTLGLGTGSTAAHALDRLGDLLRAGALPGVAGVPTSLKTE 75
Query: 60 NFCKIHHIPLHSPEDVS--SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
IPL + S + LSIDG DE+D L L+KG GG+LLREK+I A RF+V
Sbjct: 76 AHASAVGIPLLPLDAASGARIALSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGDRFVV 135
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVAS-CFGLNEELRLRRNGSG----- 170
I DESK V G +P+E+ FG TL ++ + G + LR G
Sbjct: 136 IVDESKLVPRLGCTGAIPVEVIPFGAPHTLGLIRNLFDGVSGFHARLRTAPAAKGEDLEA 195
Query: 171 LFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
FV+D GNYIV+ FF G D + IS L I GV+EHG+F+ M I+ DG V
Sbjct: 196 PFVTDNGNYIVEMFFEDGIRGDLRDISDRLLRITGVVEHGMFLGMATTVIVANKDGTVAV 255
Query: 229 LQK 231
+ +
Sbjct: 256 MGR 258
>gi|170016514|ref|YP_001727433.1| ribose 5-phosphate isomerase A [Leuconostoc citreum KM20]
gi|169803371|gb|ACA81989.1| Ribose 5-phosphate isomerase A [Leuconostoc citreum KM20]
Length = 227
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 123/231 (53%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M K A RRA ++V +GM +G+G+GST + L +++A + + +S T
Sbjct: 1 MSQALQKIIAGRRAAEFVQNGMVVGIGSGSTIAHVIEALGERVAQEQLNIVGVATSEKTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+++ +D+ +DL+IDG D+I IKG G ALL EKI+A + + I +
Sbjct: 61 RNAAQLGIPMYNVDDIDKIDLTIDGADQIADDFSAIKGGGAALLWEKIVAFNSRQNIWVV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE+KRV L + LP+E+ +G N+ + G + RL +NG +D N+
Sbjct: 121 DETKRVTKLNQ-YLPVEVIPYGANQLFKRFQ----ADGFHPTWRLDQNG-NPVRTDSANF 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++D I +P+ + EL + GV+EHGLF ++V+ IIGT V+
Sbjct: 175 LIDLHLPMIDNPRDLGDELIKMVGVVEHGLFTDVVNRVIIGTDSQTAKVID 225
>gi|156356182|ref|XP_001623808.1| predicted protein [Nematostella vectensis]
gi|156210540|gb|EDO31708.1| predicted protein [Nematostella vectensis]
Length = 231
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 9/229 (3%)
Query: 7 KRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKI 64
K+ AA A+ ++V +G LG+G+GST + LA ++ V +P+S +
Sbjct: 5 KKAAAVYAVNKFVKNGHVLGIGSGSTVVYAVERLAKRVMKEKLEVVCVPTSFQAQQLITE 64
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ + L E +D++IDG DE+D+ L LIKG GG L +EKI+A A ++I D+ K
Sbjct: 65 NKLVLSDLERNPELDVAIDGADEVDANLTLIKGGGGCLTQEKIVASCAKTLVIIADDRKD 124
Query: 125 VDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
LG +P+E+ F + +++ GL+ LR+ + +G V+D GN+I+
Sbjct: 125 SKQLGEKWSKGVPVEVVPFAYRPVMLKMEK----MGLSPVLRMAKAKAGPVVTDNGNFII 180
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D F D ++ +L IPGV+E GLF+NM + + G DG
Sbjct: 181 DVGFSKPQDWNKLNTDLNLIPGVLETGLFVNMTNHVVFGKEDGSIATRD 229
>gi|48477637|ref|YP_023343.1| ribose-5-phosphate isomerase A [Picrophilus torridus DSM 9790]
gi|67461419|sp|Q6L1K2|RPIA_PICTO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|48430285|gb|AAT43150.1| ribose 5-phosphate isomerase [Picrophilus torridus DSM 9790]
Length = 218
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 12/225 (5%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR AA A+++V + M +G+GTGSTA F+ L++ + NG R+ IP+S+ +E C+
Sbjct: 3 ENEKRMAAMEALKFVRNDMRIGIGTGSTAYYFIEGLSELVKNGLRITGIPTSKKSEELCR 62
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IP+ ++ +D+ DG DE D LIKG GGAL+REKI+A+ + F V+ D SK
Sbjct: 63 SFNIPVDY--NIKDIDIDFDGADEFDPYGNLIKGGGGALVREKIVAYNSREFYVLVDHSK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ L + LP+E+ F KTL E G R F+SD GNYI+D
Sbjct: 121 YSERLHKFPLPVEVLPFMSEKTL----ENIERLGCRASFR----DDKKFISDNGNYIIDC 172
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F + DP + ++ IPGV+E G+F ++ GT DG ++
Sbjct: 173 VFSY-TDP-ELESQIKMIPGVVEVGIFRHLSTKIFQGTIDGCRII 215
>gi|94310463|ref|YP_583673.1| ribose-5-phosphate isomerase A [Cupriavidus metallidurans CH34]
gi|93354315|gb|ABF08404.1| ribose 5-phosphate isomerase (cbbI) [Cupriavidus metallidurans
CH34]
Length = 219
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K AR A+ +V+ G +G+GTGST F+ L+ + G V S+ T
Sbjct: 1 MTQDEIKAMVARAALPHVLPGSIIGVGTGSTVNHFIDALS-SLREGIAGAVSSSNATTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H I + +V + L +DG DEID +IKG G AL REKI+A A RF+ I D
Sbjct: 60 L-RGHGIRVLEAGEVEQLALYVDGADEIDPHGHMIKGGGAALTREKIVADLAQRFLCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V+ LGR LP+E+ + + G LR V+D G+ I
Sbjct: 119 ASKKVEVLGRFPLPVEVIDVAATRIARRF----AAIGGRAVLRKG------VVTDNGHPI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D I DP + E+ PGV+ GLF + ++GT +G +
Sbjct: 169 LDVHGLAIADPPALEAEINQWPGVVTVGLFARHRAHACLLGTPEGVLTL 217
>gi|171779781|ref|ZP_02920737.1| hypothetical protein STRINF_01618 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281883|gb|EDT47317.1| hypothetical protein STRINF_01618 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 218
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 121/224 (54%), Gaps = 7/224 (3%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHI 67
A A QYV DGM +G+GTGSTA F+ + ++ G +V + +S T + I
Sbjct: 1 MAGVTAAQYVKDGMVVGLGTGSTAYFFVEEIGRRMKEEGLKVVGVTTSSQTTAQAEGLGI 60
Query: 68 PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127
PL + +D+ +D+++DG DE+D IKG GGALL EKI+A + +I + DESK VD
Sbjct: 61 PLKAVDDIDVIDVTVDGADEVDKNFNGIKGGGGALLMEKIVATPSKEYIWVVDESKMVDT 120
Query: 128 LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF 187
LG LP+E+ Q+G ++ ++ + R FV+D NYI+D G
Sbjct: 121 LGAFKLPVEVVQYGADRIFREFEKKGY------KPSYRMANGERFVTDMKNYIIDLDLGA 174
Query: 188 IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I +P + EL + GV+E GLF MV+ I+ DG ++ K
Sbjct: 175 IKNPVELGKELKAMVGVVEDGLFNGMVNKVIVAGKDGVKILEAK 218
>gi|114771703|ref|ZP_01449107.1| Ribose-5-phosphate isomerase [alpha proteobacterium HTCC2255]
gi|114547775|gb|EAU50665.1| Ribose-5-phosphate isomerase [alpha proteobacterium HTCC2255]
Length = 262
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 125/223 (56%), Gaps = 1/223 (0%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIH 65
K +A RA+ +V M LG+GTGSTA + LLA +I N G + +S T +
Sbjct: 12 KFTSAYRALDFVESDMKLGLGTGSTAAWLVKLLAYEINNKGLNISACATSSETTKLAESL 71
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
I + + +++ +DL+IDG DE D L LIKG G ALL+EKI+ AA++ +VI D SK+V
Sbjct: 72 GIKISNLDELGQLDLAIDGADEFDQNLNLIKGGGAALLQEKIVETAANKLVVITDASKQV 131
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
D LG LP+E+ +FG T ++ V ++ + RRN ++D +YI+D
Sbjct: 132 DDLGTFDLPVEVVKFGWKTTKRLIENVLIDQDVDCRIVTRRNNHTPVITDENHYILDLKL 191
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I +P +S L NI GV+E GLF+ M I+G +G V
Sbjct: 192 NRIGNPNALSDALLNIAGVVETGLFLGMTHSIIMGNENGLARV 234
>gi|86142746|ref|ZP_01061185.1| ribose 5-phosphate isomerase [Leeuwenhoekiella blandensis MED217]
gi|85830778|gb|EAQ49236.1| ribose 5-phosphate isomerase [Leeuwenhoekiella blandensis MED217]
Length = 224
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A Q K+ AA A++Y+ D M +G+GTGSTAK + + +A G + +PSS TE
Sbjct: 1 MTADQEKKQAALEAVKYIEDNMVVGLGTGSTAKHMIEAVGALVAKGMNLTCVPSSDATEK 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + + +++ +D++IDG DE D+ +LIKG GGALLREKI+A I+I D
Sbjct: 61 LAKELGIKIVALDEIEKIDVTIDGADEFDANFQLIKGGGGALLREKILAWNTKFNIIIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ LG LP+E+ F + ++ L+E + R G+ + +D N I
Sbjct: 121 SSKDVEKLGAFKLPLEVIPFATKQIITFLEEEGL------KPVQRMKGNDPYRTDENNNI 174
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
VD + D + + +L +PG++E GLF++ I+G DG + ++
Sbjct: 175 VDVDIFEVDDLKALEIKLLKVPGIVETGLFLDTTSLIIVGKEDG-PEIKKR 224
>gi|254515793|ref|ZP_05127853.1| ribose 5-phosphate isomerase A [gamma proteobacterium NOR5-3]
gi|219675515|gb|EED31881.1| ribose 5-phosphate isomerase A [gamma proteobacterium NOR5-3]
Length = 230
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 113/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
MD +K + A+ A+ + LG+GTGSTA F+ LLAD + SS+
Sbjct: 1 MDQDSLKLSVAKAALDIIVPQLEPDTILGIGTGSTANMFIDLLAD--VAHLFDGAVASSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ K H+IP++ V+ V + IDG DE + L LIKG G AL REKI+A A FI
Sbjct: 59 ASAERLKSHNIPVYDLNAVNQVAVYIDGADECNEALELIKGGGAALTREKIVAAVAREFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ + G + LR V+D
Sbjct: 119 CIADGSKWVHTLGEFPLPVEVIPMARSHVARE----LVKLGGDPVLREG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
GN I+D + IP P ++ I GV+ +GLF + D ++GT++G +
Sbjct: 169 GNVILDIYNFAIPQPLATEAKINGIVGVVCNGLFALRPADRLLLGTAEGVRDI 221
>gi|186476451|ref|YP_001857921.1| ribose-5-phosphate isomerase A [Burkholderia phymatum STM815]
gi|238691325|sp|B2JKP8|RPIA_BURP8 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|184192910|gb|ACC70875.1| ribose 5-phosphate isomerase [Burkholderia phymatum STM815]
Length = 231
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 117/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K+ + A YV +G +G+GTGSTA F+ LA A + SS
Sbjct: 1 MTQDELKQLVGQAAADYVIANVPEGTIIGVGTGSTANCFIDALAAHKAR--FRGAVSSSV 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H IP+ D+ S+ + +DG DEID +IKG GGAL REKI+A A +F+
Sbjct: 59 ATTARLQSHGIPVFDLNDIESLPVYVDGADEIDHGGAMIKGGGGALTREKIVASVAEKFL 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG+ LP+E+ + G +R+ ++G+ F++D
Sbjct: 119 CIADASKVVDVLGQFPLPVEVVPMARTAIGRR----VTALGGVPIVRVTKDGA-PFLTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G ++
Sbjct: 174 GNEIIDVKGLRITDPRTLEAHVNAWPGVVTVGLFAARGADLCLLGTQKGVETIV 227
>gi|227513997|ref|ZP_03944046.1| ribose-5-phosphate isomerase [Lactobacillus fermentum ATCC 14931]
gi|227087641|gb|EEI22953.1| ribose-5-phosphate isomerase [Lactobacillus fermentum ATCC 14931]
Length = 228
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 122/230 (53%), Gaps = 7/230 (3%)
Query: 1 MDALQ-MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNT 58
M+ +K+ + A + V +GM +G+GTGST + + L ++ G + + +S T
Sbjct: 1 MNQQDILKQLVGQTAAKLVKNGMIVGLGTGSTVRFLVDALGKRVQEEGLAITGVTTSNRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
I + +DV VDL+IDG DE+D IKG GGALL EKI+ A++ + I
Sbjct: 61 TAQATSLGIKIVDLDDVDHVDLTIDGADEVDRDFYGIKGGGGALLWEKIVNDASTNNVWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD +G +P+E+ FG +K + + G + R G L+ +D N
Sbjct: 121 VDQSKVVDRIGAFGVPVEVIPFGASKVFAKFEHQ----GYQPQWRTDEAG-QLYRTDENN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
YI+D G + DP ++ +L N GV+EHGLF+N V+ I+G G +
Sbjct: 176 YIIDLKLGPLTDPLALAEDLINTVGVVEHGLFLNRVNQVIVGNEAGITTL 225
>gi|83747964|ref|ZP_00944995.1| Ribose 5-phosphate isomerase [Ralstonia solanacearum UW551]
gi|83725382|gb|EAP72529.1| Ribose 5-phosphate isomerase [Ralstonia solanacearum UW551]
Length = 278
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 51 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 108
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID +IKG GGAL REKI+A A +F+
Sbjct: 109 ASTRRLQGHGFAVLDLNEVDTIPVYVDGADEIDDTGAMIKGGGGALTREKIVASVAGQFV 168
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG LP+E+ + G LR+ + G ++ +D
Sbjct: 169 CIADGSKLVDVLGAFPLPVEVVPMARAAVARQ----LAALGGQPRLRMTKEG-QIYQTDN 223
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I +P+ + ++ +IPGV+ GLF + ++GT G
Sbjct: 224 GNVILDVVGLRIGEPKTLEAQINDIPGVVTVGLFAKHGANVLLLGTETGV 273
>gi|33602381|ref|NP_889941.1| ribose-5-phosphate isomerase A [Bordetella bronchiseptica RB50]
gi|41017683|sp|Q7WH03|RPIA_BORBR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33576820|emb|CAE33900.1| ribose 5-phosphate isomerase a [Bordetella bronchiseptica RB50]
Length = 226
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 116/235 (49%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ AA A++ V + +G+GTGSTA F+ LA G + SS
Sbjct: 3 TQQELKQQAAEAALELVEQVAGPDVIIGVGTGSTADLFIDGLARF--KGRLRGTVASSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H + + DV S+ + +DG DEID L +IKG GGAL REKI+A A R+I
Sbjct: 61 SAARLAGHGLAVLDLNDVQSMPIYVDGADEIDPNLHMIKGGGGALTREKIVASVARRYIC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V+ LGR LP+E+ N S G LR FV+D G
Sbjct: 121 IADESKLVERLGRFPLPVEVIPMARNAVAR----GLSRLGGQPALREG------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
N I+D I D + + +IPGV+ GLF + D A++ T DG + ++
Sbjct: 171 NIILDVAGLSIADAPGLEKTINDIPGVVTCGLFALAGADVALLATQDGIRRLERR 225
>gi|332532894|ref|ZP_08408767.1| ribose 5-phosphate isomerase A [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037740|gb|EGI74191.1| ribose 5-phosphate isomerase A [Pseudoalteromonas haloplanktis
ANT/505]
Length = 217
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 13/225 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA A+++V + +G+GTGST F+ L + + V S +T
Sbjct: 1 MTQDELKKAAAWAALEFVKENTIVGVGTGSTVNHFIDALG-SVKDTIVGAVSSSEASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +V ++D+ +DG DEI+++ +IKG G AL REKI+A A +F+ I D
Sbjct: 60 LEAL-GIEVFELNNVDALDVYVDGADEINAQNEMIKGGGAALTREKIVAAVAKQFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K VD LG LP+E+ + G + R V+D GN I
Sbjct: 119 DTKLVDTLGDFPLPVEVIPMARSYVARE----LLKLGGDPVYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDG 224
+D F I + + + ++ +I GV+ +GLF D IIGT +G
Sbjct: 169 LDVFNLKITNAKQLETQINSIVGVVTNGLFAMRGADKVIIGTKNG 213
>gi|298675476|ref|YP_003727226.1| ribose 5-phosphate isomerase [Methanohalobium evestigatum Z-7303]
gi|298288464|gb|ADI74430.1| ribose 5-phosphate isomerase [Methanohalobium evestigatum Z-7303]
Length = 232
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 116/225 (51%), Gaps = 6/225 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
+ K +A A V DGM +G+GTGST + + +I VQ + +S +E
Sbjct: 8 TSDSGKESAGVAAAGLVEDGMIIGLGTGSTTAYAISEVGKRINEEELDVQAVVTSYQSEM 67
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL S + +DL IDG D++D L IKG G A +EK++A ++ +FI + D
Sbjct: 68 LAIDAGIPLTSLSEHPELDLDIDGADQVDFELNAIKGGGAAHTKEKVVACSSKQFIAVID 127
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK D L +P+E+ + N L + G E+R + G ++D GN I
Sbjct: 128 ESKLSDKLNHS-VPVEVLPYSRNLVL----QNMQNMGAEPEIRQAVHKDGPVITDNGNLI 182
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
+DA F I +P ++ EL IPG++EHG+F M+D +G DG
Sbjct: 183 IDADFDVIENPNNLASELSAIPGIVEHGIFTGMIDEIYMGKKDGT 227
>gi|329118440|ref|ZP_08247146.1| ribose 5-phosphate isomerase A [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465486|gb|EGF11765.1| ribose 5-phosphate isomerase A [Neisseria bacilliformis ATCC
BAA-1200]
Length = 222
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M +KR A +A+++V + +G+GTGST F+ LA + SS T
Sbjct: 1 MTAQDDLKRMAGAKAVEFVPEDEYIGIGTGSTVNYFIQALAASGKT--VKGAVSSSNATS 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + IP + DV V DG DE++ L++IKG GGALLREKI+A A F+ I
Sbjct: 59 AMLEKYGIPEVTLSDVVRVAAYFDGADEVNHSLQMIKGGGGALLREKIVASTADLFVCIA 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESK V LG+ LP+E+ + G +LR+ F +D GN
Sbjct: 119 DESKYVARLGKFPLPVEVIPHARSLVARQ----LLKLGGEPQLRVG------FTTDSGNE 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I P + E+ IPGV+E+GLF D I+ G ++
Sbjct: 169 ILDVSGLDISRPLTLEDEINQIPGVVENGLFARYTADILILARPGGAEVI 218
>gi|329113979|ref|ZP_08242746.1| Ribose-5-phosphate isomerase A [Acetobacter pomorum DM001]
gi|326696726|gb|EGE48400.1| Ribose-5-phosphate isomerase A [Acetobacter pomorum DM001]
Length = 237
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 124/225 (55%), Gaps = 8/225 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIH 65
K+ AA +A V DGM +G+GTGSTAK + L ++ G R++ IP+S TE +
Sbjct: 13 KQQAAIKAASLVQDGMAVGLGTGSTAKFVVAELGRRVREEGLRIRAIPTSSVTEKQAREE 72
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
IPL + + +D++IDG DEI+ R LIKG GGALL EKI+A AA +F+V+ D +K
Sbjct: 73 GIPLTTFGEQPELDIAIDGADEIEPRTLNLIKGLGGALLWEKIVASAAKQFVVVADATKY 132
Query: 125 VDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
VD + LP+E+ FG G + R R + +++D N I+D
Sbjct: 133 VDHLGAKCPLPVEVIPFGWENVARQ----LGALGAHVTPR-RNRDASFYLTDEKNLIMDC 187
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
FG + +P+ + + I GV+EHGLF++M I +G ++
Sbjct: 188 VFGPMMEPEKLGRSILEIVGVVEHGLFLHMARQTITAGPEGIRIL 232
>gi|166362991|ref|YP_001655264.1| ribose-5-phosphate isomerase A [Microcystis aeruginosa NIES-843]
gi|166085364|dbj|BAG00072.1| ribose 5-phosphate isomerase [Microcystis aeruginosa NIES-843]
Length = 236
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ + A V +G+GTGST + L ++ +G + +P+S + +
Sbjct: 10 MKQEVGKAAANLVQSNSVVGLGTGSTTAYAIEYLGARLQSGEISNIVGVPTSFQAQVLAR 69
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + + ++ +D++IDG DE+D + LIKG G A +EKI+ A F+V+ D +K
Sbjct: 70 KYGIPLTTLDVIAKMDIAIDGADEVDPQKNLIKGGGAAHTQEKIVDSLADIFVVVVDGNK 129
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ + + G LR+ +G V+D GN ++D
Sbjct: 130 LVDKLGSTFLLPVEVLPMAMTPVMRK----LEALGGKPSLRMGVKKAGPVVTDQGNLVID 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + + N+PGV+E+GLF+ + D ++G DG+ +V +
Sbjct: 186 VKFDSIDDPADLERTINNMPGVLENGLFVGVADLILVGEIIDGKPVVRE 234
>gi|172035020|ref|YP_001801521.1| ribose-5-phosphate isomerase A [Cyanothece sp. ATCC 51142]
gi|171696474|gb|ACB49455.1| ribose 5-phosphate isomerase [Cyanothece sp. ATCC 51142]
Length = 233
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 7/218 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V +G+GTGST + + +++ +G + + +S E +
Sbjct: 8 MKQEVGKAAAARVKSDSIVGLGTGSTTAYAIQYIGERLQSGELKNIVGVTTSFQAEVLAR 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
++IPL + + V +D++IDG DE+D + LIKG G A +EKI+ A +FIV+ D K
Sbjct: 68 KYNIPLSTLDVVDRIDIAIDGADEVDPQKNLIKGGGAAHTQEKIVDSLAEQFIVVVDGGK 127
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ V + L++ G ELR+ +G V+D GN ++D
Sbjct: 128 LVDKLGSTFLLPVEVIPKAVVPVMRKLEQ----LGGKPELRMGVKKAGPVVTDQGNLVID 183
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
F I DP + + NIPGV+E+GLF+ + D ++G
Sbjct: 184 VKFDSIDDPATLEKTINNIPGVLENGLFVGVTDVVLVG 221
>gi|261414438|ref|YP_003248121.1| ribose 5-phosphate isomerase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370894|gb|ACX73639.1| ribose 5-phosphate isomerase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 229
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 7/224 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
++K+ A RA + DGM +G+GTGSTA + LA++I G V + +S +T
Sbjct: 3 SMDELKKAAGVRAADMIKDGMIVGLGTGSTAAHMVNRLAERIKTEGIHVTGVSTSWSTTL 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ IPL +VS +D+ IDG DEID LIKG G A L EKI+A +++I D
Sbjct: 63 QCRSLGIPLKEMGEVSHLDMVIDGADEIDPNRNLIKGRGAAHLLEKIVASMTDNYVIIAD 122
Query: 121 ESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFVSDGGN 178
K V + +P+EI + +K+ G ++R+ G +SD GN
Sbjct: 123 SGKAVQQLGTKFAVPLEIIPGAIAVVTERVKK----LGGEVKVRMGAPGKDGPVISDSGN 178
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
I DA F I DP ++ +L +I G++ HGLFINM I+
Sbjct: 179 LIADAKFAPIADPDKLARDLEHIVGIVGHGLFINMATKVILADE 222
>gi|269837786|ref|YP_003320014.1| ribose 5-phosphate isomerase [Sphaerobacter thermophilus DSM 20745]
gi|269787049|gb|ACZ39192.1| ribose 5-phosphate isomerase [Sphaerobacter thermophilus DSM 20745]
Length = 234
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 18 VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
V DG +G+GTGSTA+ + LA+++ G R+ +P+S +E + IPL +D +
Sbjct: 23 VQDGAVVGLGTGSTAECVIQALAERVKEGLRIVGVPTSLRSERLARSLGIPLIDLQDATR 82
Query: 78 VDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGMLPI 135
+D++IDG DE+ L ++KG+GGALLREK++A A+ R +++ D++K V+ R +P+
Sbjct: 83 IDVTIDGADEVAVGTLDVLKGHGGALLREKLVAVASEREVIVVDDTKLVERLGSRFAVPV 142
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ FG + G LR FV+D GNYI+D FG I +P ++
Sbjct: 143 EVVPFGW----RVPAQALEALGGRVALRSVPPEGEPFVTDNGNYILDVDFGPIANPAALA 198
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
E+ I GVIEHGLFI + I+ + G VL +
Sbjct: 199 NEIKTITGVIEHGLFIGIAHEVIVAGAQG-VEVLTR 233
>gi|302326480|gb|ADL25681.1| ribose 5-phosphate isomerase A [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 232
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 7/224 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
++K+ A RA + DGM +G+GTGSTA + LA++I G V + +S +T
Sbjct: 6 SMDELKKAAGVRAADMIKDGMIVGLGTGSTAAHMVNRLAERIKTEGIHVTGVSTSWSTTL 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ IPL +VS +D+ IDG DEID LIKG G A L EKI+A +++I D
Sbjct: 66 QCRSLGIPLKEMGEVSHLDMVIDGADEIDPNRNLIKGRGAAHLLEKIVASMTDNYVIIAD 125
Query: 121 ESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFVSDGGN 178
K V + +P+EI + +K+ G ++R+ G +SD GN
Sbjct: 126 SGKAVQQLGTKFAVPLEIIPGAIAVVTERVKK----LGGEVKVRMGAPGKDGPVISDSGN 181
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
I DA F I DP ++ +L +I G++ HGLFINM I+
Sbjct: 182 LIADAKFAPIADPDKLARDLEHIVGIVGHGLFINMATKVILADE 225
>gi|298242736|ref|ZP_06966543.1| ribose 5-phosphate isomerase [Ktedonobacter racemifer DSM 44963]
gi|297555790|gb|EFH89654.1| ribose 5-phosphate isomerase [Ktedonobacter racemifer DSM 44963]
Length = 231
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 86/222 (38%), Positives = 120/222 (54%), Gaps = 9/222 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV-IPSSRNTENFCKIH 65
K+ A+ A Q V D M +G+GTGSTA F+ LA ++ G R+ I SS ++ +
Sbjct: 12 KQAASEAAAQLVEDDMLVGLGTGSTAAFFIQALARRMQQGLRIAGTISSSLASQELAQSL 71
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
HIP+ S+D+ IDG DEIDS+L L+KG GGALLREKI+A A+ RF+VI D+ K V
Sbjct: 72 HIPITDFATHPSLDIYIDGADEIDSQLNLVKGGGGALLREKIVASASRRFVVIADQLKLV 131
Query: 126 D-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
LPIE F L L ++LR + F++D N I+D
Sbjct: 132 QRLGQSFALPIEAIPFAAPLVSRKLT------NLGATVKLRGGSTTPFITDNHNVILDCT 185
Query: 185 F-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
F I DP + +L ++ G++E GLF+ M A+IG G
Sbjct: 186 FADGILDPAALDEQLHHVVGIVETGLFLGMAQQALIGGPHGV 227
>gi|104773652|ref|YP_618632.1| ribose-5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513646|ref|YP_812552.1| ribose-5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122275584|sp|Q04BQ8|RPIA_LACDB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123251978|sp|Q1GBA8|RPIA_LACDA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|103422733|emb|CAI97362.1| Ribose 5-phosphate isomerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092961|gb|ABJ58114.1| ribose-5-phosphate isomerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325125296|gb|ADY84626.1| Ribose-5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 230
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 125/235 (53%), Gaps = 9/235 (3%)
Query: 1 MDA---LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ-VIPSSR 56
MD ++K+ AA++A V DGM LG+GTGST K F+ L K A G ++ V+ +S
Sbjct: 1 MDQAKQDELKKAAAKKAAALVEDGMVLGVGTGSTVKFFIDELGKKKAAGLTLKAVVTTSS 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
++ + + + +V VDL++DG D +D +L IKG G AL EK +A + + +
Sbjct: 61 RSQKQLEGYGFTVSPLSEVDQVDLTVDGADRVDKQLNGIKGGGAALTLEKNVAVNSKKNV 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VD L LP+E+ + ++ + GL E RL +G +
Sbjct: 121 WIVDESKVVDHLSGFALPVEVLPISCMQV----EKRLADEGLKPEFRLTEDG-QRLKTHY 175
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GNYI+D IP P ++ L + GV+EHGLF+N+ D II +GE V +
Sbjct: 176 GNYILDLKLDRIPVPSGLADYLDHTVGVVEHGLFLNICDQVIIARDNGEIEVRSR 230
>gi|242083852|ref|XP_002442351.1| hypothetical protein SORBIDRAFT_08g018730 [Sorghum bicolor]
gi|241943044|gb|EES16189.1| hypothetical protein SORBIDRAFT_08g018730 [Sorghum bicolor]
Length = 261
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 95/244 (38%), Positives = 129/244 (52%), Gaps = 15/244 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA+++V GMTLG+GTGSTA + L D + G V +P+S TE
Sbjct: 18 TQDELKRVAAHRAVEFVEPGMTLGLGTGSTAAHALDRLGDLLRAGALPGVAGVPTSLKTE 77
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + LSIDG DE+D L L+KG GG+LLREK++ A RF+VI
Sbjct: 78 AHAARVGIPLLPLAGAG-IRLSIDGADEVDPDLNLVKGRGGSLLREKMVEGAGDRFVVIV 136
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVAS-CFGLNEELR--------LRRNGS 169
DESK V G +P+E+ FG + TL +++V G + LR
Sbjct: 137 DESKLVPRLGCTGAVPVEVIPFGASHTLGLIRKVFDGVPGFHARLRTVPAAAKGDGDGSD 196
Query: 170 GLFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
F +D GNYIV+ FF G D + IS L I GV+EHG+F+ + I+ DG
Sbjct: 197 APFRTDNGNYIVEMFFEDGIRGDLRDISDRLLRITGVVEHGMFLGLATTVIVANKDGTVT 256
Query: 228 VLQK 231
V+ K
Sbjct: 257 VINK 260
>gi|119503492|ref|ZP_01625575.1| ribose-5-phosphate isomerase A [marine gamma proteobacterium
HTCC2080]
gi|119460554|gb|EAW41646.1| ribose-5-phosphate isomerase A [marine gamma proteobacterium
HTCC2080]
Length = 224
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
MD MK A A+++V D + LG+GTGSTA+ F+ LL I + + SS+
Sbjct: 1 MDQQGMKEAVALAALEWVKALPGDNLVLGIGTGSTAECFIRLL-PAIKQRINIT-VSSSQ 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + IPL DV +D IDG DE + RL+LIKG G AL REKIIA AA RF+
Sbjct: 59 RSAALLQELQIPLGDLNDVGQLDAYIDGADEANQRLQLIKGGGAALTREKIIAAAAKRFL 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK+V LG LP+E+ + G R V+D
Sbjct: 119 CIADASKKVATLGAFPLPVEVIPMARSFVARE----LVKLGGQPIWRDG------VVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
GN I+D I + +I GV+ GLF D ++GT G +
Sbjct: 169 GNVILDVHGLSIDHALETEEAINHITGVVCSGLFARRPADVLMLGTPQGVETL 221
>gi|126658121|ref|ZP_01729272.1| ribose-5-phosphate isomerase A [Cyanothece sp. CCY0110]
gi|126620492|gb|EAZ91210.1| ribose-5-phosphate isomerase A [Cyanothece sp. CCY0110]
Length = 233
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 117/218 (53%), Gaps = 7/218 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V +G+GTGST + + +++ +G + + +S E +
Sbjct: 8 MKQEVGKAAAARVKSDSIVGLGTGSTTAYAIQYIGERLQSGDLKNIVGVTTSFQAEVLAR 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
++IPL + + V +D++IDG DE+D + LIKG G A +EKI+ A +FIV+ D K
Sbjct: 68 KYNIPLSTLDVVDRIDMAIDGADEVDPQKNLIKGGGAAHTQEKIVDSLAEQFIVVVDGGK 127
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ V + L++ G ELR+ +G V+D GN +VD
Sbjct: 128 LVDKLGSTFLLPVEVIPKAVVPVMRKLEQ----LGGKPELRMGVKKAGPVVTDQGNLVVD 183
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
F I DP + + NIPGV+E+GLF+ + D ++G
Sbjct: 184 VKFDSIDDPATLEKTINNIPGVLENGLFVGVTDIVLVG 221
>gi|167587293|ref|ZP_02379681.1| ribose 5-phosphate isomerase [Burkholderia ubonensis Bu]
Length = 234
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + DV S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KAHGITVFDLNDVESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTAAGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ E+ PGV+ GLF + ++GT G ++
Sbjct: 174 GNEIIDVKGLQIADPRGFEAEVNAWPGVVTVGLFAARGANLCLLGTESGVETIV 227
>gi|184154730|ref|YP_001843070.1| ribose 5-phosphate isomerase [Lactobacillus fermentum IFO 3956]
gi|183226074|dbj|BAG26590.1| ribose 5-phosphate isomerase [Lactobacillus fermentum IFO 3956]
Length = 228
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 7/230 (3%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNT 58
M+ +K+ + A + V +GM +G+GTGST + + L ++ G + + +S T
Sbjct: 1 MNQQDSLKQLVGQTAAKLVKNGMIVGLGTGSTVRFLVDALGKRVQEEGLAITGVTTSNRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
I + +DV VDL+IDG DE+D IKG GGALL EKI+ A++ + I
Sbjct: 61 TAQATSLGIKIVDLDDVDHVDLTIDGADEVDRDFYGIKGGGGALLWEKIVNDASTNNVWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD +G +P+E+ FG +K + + G + R G L+ +D N
Sbjct: 121 VDQSKVVDRIGAFGVPVEVIPFGASKVFAKFEHQ----GYQPQWRTDEAG-QLYRTDENN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
YI+D G + D ++ +L N GV+EHGLF+N V+ I+G G +
Sbjct: 176 YIIDLKLGPLTDLLALAEDLINTVGVVEHGLFLNRVNQVIVGNETGITTL 225
>gi|303244787|ref|ZP_07331116.1| ribose 5-phosphate isomerase [Methanothermococcus okinawensis IH1]
gi|302484828|gb|EFL47763.1| ribose 5-phosphate isomerase [Methanothermococcus okinawensis IH1]
Length = 236
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
+ K A+ A V DGM +G+G+G+TA F+ L ++A V IP+S +
Sbjct: 11 NVENAKFRVAKEAANLVKDGMIVGLGSGTTANLFIDELGRRVAEEELSVFGIPTSFESRM 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL S ++ +D++IDG DE+D L LIKG GG EKII + A F+V+
Sbjct: 71 LAIQYGIPLVSLDEYGEIDIAIDGADEVDKKSLCLIKGGGGCHTLEKIIDYCAKEFVVMV 130
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DE+K VD + +P+E+ + L+ L + + +R+ G ++D GN
Sbjct: 131 DENKIVDSLGDKTPVPLEVLPIAYSTVLNELLKRNAA----PSIRMADRKMGPVITDNGN 186
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D F + +P+ EL +IPGV+E+G+F VD ++G+ + +L K
Sbjct: 187 MIIDV-FIDLKNPEETEKELNSIPGVVENGIFT-KVDKILVGSPK-KVKILSK 236
>gi|192361815|ref|YP_001980762.1| ribose 5-phosphate isomerase A [Cellvibrio japonicus Ueda107]
gi|190687980|gb|ACE85658.1| ribose 5-phosphate isomerase A [Cellvibrio japonicus Ueda107]
Length = 225
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGM----TLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
M Q+K AR AI+Y+ + LG+GTGSTA F+ +L + + +
Sbjct: 1 MSPQDQLKHAVARAAIEYIKPKLTPDAVLGIGTGSTANFFIDMLGELKYDFAAAVASSDA 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
I + VS + + +DG DE + L LIKG G AL REKI+ A F
Sbjct: 61 SAQRLQTL--GIEVLDCNAVSELLVYVDGADESNPNLHLIKGGGAALTREKIVCAVAREF 118
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
+ I DESK VD LGR LP+E+ + G R ++D
Sbjct: 119 VCIADESKWVDILGRFPLPVEVIPMARSFVARE----LVKLGGAPVYREG------VITD 168
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
GN I+D I +P + ++ I GV+ +GLF I D ++GT +G ++
Sbjct: 169 NGNVILDVHNLQILNPVELETKINQITGVVANGLFAIKPADVLLLGTKEGVKVIR 223
>gi|148652588|ref|YP_001279681.1| ribose-5-phosphate isomerase A [Psychrobacter sp. PRwf-1]
gi|148571672|gb|ABQ93731.1| ribose-5-phosphate isomerase [Psychrobacter sp. PRwf-1]
Length = 219
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++K+ A+ A+ Y+ DGM LG+GTGST + LL G + SS+ T+
Sbjct: 1 MSQQLKLKQEVAKAALAYIDDGMILGVGTGSTVNCLIELLPQVNLKG----AVASSQVTQ 56
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + I + V +DL IDG DE++ L+LIKG GGAL REKI+A A+ +FI +
Sbjct: 57 DKLEALGIEVMDLNYVGELDLYIDGADEVNPNLQLIKGGGGALTREKIVAAASKQFICLV 116
Query: 120 DESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V LGR +PIE+ + L ++ E+ F++D GN
Sbjct: 117 DESKWVTQLGREFPVPIEVLPQARSYVARQLVKMGGEPVYRED----------FITDYGN 166
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
I+D + I L NI GV+ +G+F N D +I S G LQ+
Sbjct: 167 VILDTYNLDITSASEFEARLNNIVGVVCNGIFAANQADKLLIAKSTG-VETLQR 219
>gi|323138922|ref|ZP_08073984.1| ribose 5-phosphate isomerase [Methylocystis sp. ATCC 49242]
gi|322395866|gb|EFX98405.1| ribose 5-phosphate isomerase [Methylocystis sp. ATCC 49242]
Length = 242
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 1/215 (0%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
++ V GM LG+GTGSTA F+ LL ++ +G V +P+S T + I L + ++
Sbjct: 20 LETVTHGMKLGLGTGSTAAHFVDLLGARVRDGLEVLCVPTSERTRAQAEGLGIRLSTLDE 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+DL++DG DE D+RLRLIKG GGALLREKI+A A+ R +VI D +K V LG LP
Sbjct: 80 TPELDLTVDGADEFDARLRLIKGGGGALLREKIVAAASRRMVVIADATKEVRTLGAFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRR-NGSGLFVSDGGNYIVDAFFGFIPDPQI 193
+E+D+FG T ++ VA GL + R +++DGG+YI D FG I P+
Sbjct: 140 VEVDRFGARSTQLQIERVARGLGLIGTITRRMAAPDAPYLTDGGHYIFDCAFGAIDAPEA 199
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++ L IPGV++HGLFI + I + G ++
Sbjct: 200 LAERLSCIPGVVDHGLFIGLAKAIFIAGAKGVRII 234
>gi|332523797|ref|ZP_08400049.1| ribose 5-phosphate isomerase A [Streptococcus porcinus str.
Jelinkova 176]
gi|332315061|gb|EGJ28046.1| ribose 5-phosphate isomerase A [Streptococcus porcinus str.
Jelinkova 176]
Length = 227
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 119/228 (52%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G ++ + +S T
Sbjct: 2 EALKKIAGVTAAQYVKDGMTVGLGTGSTAYYFVEEVGRRVKEEGLQIVGVTTSSRTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +D+ +D+++DG DE+D IKG G ALL EKI+A +I + DES
Sbjct: 62 QELGIPLKSVDDIDVIDVTVDGADEVDKAFNGIKGGGAALLMEKIVATPTKDYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG +P+E+ Q+G + ++ C R V+D NYI+D
Sbjct: 122 KMVEHLGAFKVPVEVVQYGSERLCRVFEKAGYC------PSFRMKDGQKLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP + L GV+EHGLF MV+ I+ DG VL+
Sbjct: 176 LDMKCIEDPFAFAEILDATVGVVEHGLFNGMVNKVIVAGKDG-VQVLE 222
>gi|313123242|ref|YP_004033501.1| ribose-5-phosphate isomerase a [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279805|gb|ADQ60524.1| Ribose-5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325684571|gb|EGD26732.1| ribose 5-phosphate isomerase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 230
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ-VIPSSRNTENFCKIHHIPLHSPEDV 75
V DGM LG+GTGST K F+ L K A G ++ V+ +S ++ + + + +V
Sbjct: 20 LVEDGMVLGVGTGSTVKFFIDELGKKKAAGLTLKAVVTTSSRSQKQLEGYGFTVSPLSEV 79
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
VDL++DG D +D +L IKG G AL EK +A + + + I DESK VD L LP+
Sbjct: 80 DQVDLTVDGADRVDKQLNGIKGGGAALTLEKNVAVNSKKNVWIVDESKVVDHLSGFALPV 139
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + ++ + GL E RL +G + GNYI+D IP P ++
Sbjct: 140 EVLPISCMQV----EKRLADEGLKPEFRLTEDG-QRLKTHYGNYILDLKLDRIPVPSGLA 194
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
L + GV+EHGLF+N+ D II +GE V +
Sbjct: 195 DYLDHTVGVVEHGLFLNICDQVIIARDNGEIEVRSR 230
>gi|91081381|ref|XP_972215.1| PREDICTED: similar to ribose-5-phosphate isomerase [Tribolium
castaneum]
gi|270005180|gb|EFA01628.1| hypothetical protein TcasGA2_TC007198 [Tribolium castaneum]
Length = 233
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 8/229 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENF 61
K+ AA +A+ +V + +G+G+GST + LA+++ VQ +P+S
Sbjct: 5 ESAKKLAAYKAVDLHVQNNSIVGVGSGSTVVYAVERLAERVKNEKLNVQCVPTSFQARQL 64
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
H + L E +D+ IDG DE+DS L LIKG GG LL+EKI+A A I+I D
Sbjct: 65 IIQHRLHLTDLEIHPRLDVCIDGADEVDSTLTLIKGGGGCLLQEKIVASCAKELIIIADY 124
Query: 122 SKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+K + +PIE+ + ++ + G ELR+ + +G V+D GN
Sbjct: 125 TKNSQKLGEQYKKGIPIEVVPMAYLPIKTQIE---NQLGGTVELRMAKAKAGPVVTDNGN 181
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+I+D I+ +L IPGV+E GLF+NM A G +DG
Sbjct: 182 FILDWKNFQDYKWDTINTKLNLIPGVVETGLFVNMAKKAYFGLADGSVK 230
>gi|89900990|ref|YP_523461.1| ribose-5-phosphate isomerase A [Rhodoferax ferrireducens T118]
gi|122479140|sp|Q21WC3|RPIA_RHOFD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|89345727|gb|ABD69930.1| ribose-5-phosphate isomerase [Rhodoferax ferrireducens T118]
Length = 234
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 9/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A+QYV G +G+GTGST +F+ LA I + + V S +T
Sbjct: 13 SQDELKTLVGQAALQYVAPGEIVGVGTGSTVNKFIDALA-SIRHLIKGAVSSSEASTLRL 71
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ +V+ + + IDG DEID +IKG G AL REKI+A A++F+ I DE
Sbjct: 72 KAL-GIPVFDANEVAELSVYIDGADEIDGHGNMIKGGGAALTREKIVAALANQFVCIADE 130
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LGR LP+EI + + + G ++RL G V+D G ++
Sbjct: 131 SKLVQTLGRYPLPVEIIPMA----AQRITQQFAALGGRAQVRL--KGDQPLVTDNGQILL 184
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
D I DP + PGV+ G+F ++GT+ G +
Sbjct: 185 DVTGLQISDPLAFETLVSQWPGVVTVGVFAYQKAQVCLLGTARGVKTL 232
>gi|221133831|ref|ZP_03560136.1| ribose-5-phosphate isomerase A [Glaciecola sp. HTCC2999]
Length = 217
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M KR AA+ A+ YV +G+GTGST F+ LA + SS +
Sbjct: 1 MTQDDKKRAAAQAALAYVKPDDIVGVGTGSTVNYFIEALAA--KKDLIEGAVSSSDASTQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + V D+ IDG DEI +IKG G AL REKI++ A F+ I D
Sbjct: 59 QLKALGIEVFDLNSVDQFDIYIDGADEITEHKHMIKGGGAALTREKIVSAVAKTFVCIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K+V LG LP+E+ + G + R ++D GN I
Sbjct: 119 DTKQVGMLGDFPLPVEVIPMARSYVARE----LVKLGGDPVYRQG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I DP+ + ++ I GV+ +GLF + D I+G DG +
Sbjct: 169 LDVHNLTILDPRALETKINQIVGVVTNGLFAHRGADILIVGGEDGVKTL 217
>gi|33596332|ref|NP_883975.1| ribose-5-phosphate isomerase A [Bordetella parapertussis 12822]
gi|41017680|sp|Q7W9Q5|RPIA_BORPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33566101|emb|CAE37001.1| ribose 5-phosphate isomerase a [Bordetella parapertussis]
Length = 226
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 116/235 (49%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ AA A++ V + +G+GTGSTA F+ LA G + SS
Sbjct: 3 TQQELKQQAADAALELVEQVAGPDVIIGVGTGSTADLFIDGLARF--KGRLRGTVASSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H + + DV S+ + +DG DEID L +IKG GGAL REKI+A A R+I
Sbjct: 61 SAARLAGHGLAVLDLNDVQSMPIYVDGADEIDPNLHMIKGGGGALTREKIVASVARRYIC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V+ LGR LP+E+ N S G LR FV+D G
Sbjct: 121 IADESKLVERLGRFPLPVEVIPMARNAVAR----GLSRLGGQPALREG------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
N I+D I D + + +IPGV+ GLF + D A++ T DG + ++
Sbjct: 171 NIILDVAGLSIADAPGLEKTINDIPGVVTCGLFALAGADVALLATQDGIRRLERR 225
>gi|126697018|ref|YP_001091904.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9301]
gi|126544061|gb|ABO18303.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. MIT
9301]
Length = 231
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 79/228 (34%), Positives = 127/228 (55%), Gaps = 8/228 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ A AI+ V M LG+G+GSTA + LAD++ +G ++ + +S +E
Sbjct: 1 MKQVVADAAIREVKSDMILGLGSGSTAALMIKSLADEMRSGKLQNIKGVATSFQSEVLAL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL VS +DL+IDG DE+D +LIKG G +REK++A A + +++ DE+K
Sbjct: 61 ELNIPLIDLASVSQIDLAIDGADEVDPGFQLIKGGGACHVREKLVASKADQLLIVVDETK 120
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V L LP+E+ + +EV S + LR+ +G V+D GN I+D
Sbjct: 121 LVQNLNLSFPLPVEVLPNAWKQV----QEVISEMKGSSTLRMATKKAGPVVTDQGNLILD 176
Query: 183 AFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
F I +P+ I ++ NIPGV+E+GLF+++ D ++G + V+
Sbjct: 177 VLFDDGINNPKDIEMKINNIPGVLENGLFVDLTDKVLVGKIENNTPVV 224
>gi|207723182|ref|YP_002253581.1| ribose-5-phosphate isomerase a (phosphoriboisomerase a)(pri)
protein [Ralstonia solanacearum MolK2]
gi|207743426|ref|YP_002259818.1| ribose-5-phosphate isomerase a (phosphoriboisomerase a)(pri)
protein [Ralstonia solanacearum IPO1609]
gi|206588376|emb|CAQ35339.1| ribose-5-phosphate isomerase a (phosphoriboisomerase a)(pri)
protein [Ralstonia solanacearum MolK2]
gi|206594823|emb|CAQ61750.1| ribose-5-phosphate isomerase a (phosphoriboisomerase a)(pri)
protein [Ralstonia solanacearum IPO1609]
Length = 228
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID +IKG GGAL REKI+A A +F+
Sbjct: 59 ASTRRLQGHGFAVLDLNEVDTIPVYVDGADEIDDTGAMIKGGGGALTREKIVASVAGQFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG LP+E+ + G LR+ + G ++ +D
Sbjct: 119 CIADGSKLVDVLGAFPLPVEVVPMARAAVARQ----LAALGGQPRLRMTKEG-QIYQTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I +P+ + ++ +IPGV+ GLF + ++GT G
Sbjct: 174 GNVILDVVGLRIGEPKTLEAQINDIPGVVTVGLFAKHGANVLLLGTETGV 223
>gi|241662772|ref|YP_002981132.1| ribose-5-phosphate isomerase A [Ralstonia pickettii 12D]
gi|240864799|gb|ACS62460.1| ribose 5-phosphate isomerase [Ralstonia pickettii 12D]
Length = 228
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID+ +IKG GGAL REKI+A A+ F+
Sbjct: 59 ASTRRLQGHGFTVLDLNEVDTIPVYVDGADEIDASGAMIKGGGGALTREKIVASVANVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ +G LP+E+ + G LR+ + G ++ +D
Sbjct: 119 CIADGSKLVETMGAFPLPVEVVPMARAAVARQ----LAALGGQPRLRMTKEG-QIYKTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I DP+ + + IPGV+ GLF + ++GT G
Sbjct: 174 GNVILDVTGLRIADPKGLESVVNEIPGVVTVGLFAKRGANVLLLGTEAGV 223
>gi|21592672|gb|AAM64621.1| putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
Length = 267
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 133/239 (55%), Gaps = 10/239 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A+++V GM +G+GTGSTAK + +++ + G + IP+S T
Sbjct: 28 TQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTTH 87
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + VDLSIDG DE+D L L+KG GG+LLREK+I A+ +F+VI
Sbjct: 88 EQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKFVVIV 147
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG----LFV 173
DESK V ++G +P+E+ F + T L+E+ G +LR++ +G V
Sbjct: 148 DESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEAAPAV 207
Query: 174 SDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D GNY+VD + I D ++ S + PGV+EHG+F+ M I+ G V +
Sbjct: 208 TDNGNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFG-VTVKDR 265
>gi|154150461|ref|YP_001404079.1| ribose 5-phosphate isomerase [Candidatus Methanoregula boonei 6A8]
gi|229564313|sp|A7I6S5|RPIA_METB6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|153999013|gb|ABS55436.1| ribose 5-phosphate isomerase [Methanoregula boonei 6A8]
Length = 237
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 7/214 (3%)
Query: 11 ARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLH 70
+A + V DGM +G+GTGST + L+ +I +G V +P+S T + + IPL
Sbjct: 16 GYQAAEMVEDGMVIGLGTGSTVFYAIECLSGRIRDGLSVVGVPTSYQTAMKAREYGIPLT 75
Query: 71 SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR 130
+ +D +DL+IDG D+ D + RLIKG G A+ REK +A AA RFIV+ DE+K V L
Sbjct: 76 TLDDNPVLDLAIDGADQADPQFRLIKGRGAAITREKCVASAAFRFIVVVDEAKMVKKL-A 134
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPD 190
G++P+E F L+ L+ G +R G ++D GN+IVD F IPD
Sbjct: 135 GVVPVETLPFATKTALAQLRG----LGCRPFIREAVKKDGPVITDNGNFIVDCQFEEIPD 190
Query: 191 PQIISGELCNIPGVIEHGLFINMV--DCAIIGTS 222
P ++ + IPGVIE GLF + I+G
Sbjct: 191 PALLEAGIAAIPGVIESGLFTRLTGNTTIIVGNE 224
>gi|284107506|ref|ZP_06386387.1| Ribose 5-phosphate isomerase [Candidatus Poribacteria sp. WGA-A3]
gi|283829932|gb|EFC34213.1| Ribose 5-phosphate isomerase [Candidatus Poribacteria sp. WGA-A3]
Length = 233
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 124/225 (55%), Gaps = 11/225 (4%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRN 57
M+ ++K+ A RAI +V GM +G+GTGSTA+ + ++ ++ +G + +PSS
Sbjct: 1 MNKTDELKKAAGVRAIDFVRAGMLVGLGTGSTAEFAIEEISRRLRDGRLSDISCVPSSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
T+NF + + L + +D+++DG DEIDS LIKG GGALLREK++A + R I+
Sbjct: 61 TKNFAEAMGLDLVELDSARRIDVTVDGADEIDSDFNLIKGGGGALLREKVLAQNSKRNII 120
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSD 175
+ DESK R +PIE+ QF E GL E+RLR G F++D
Sbjct: 121 VADESKLSRRLGERFPVPIEVLQFAFEA------ERGYLEGLGGEVRLRLARDGSPFLTD 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
GN I+D FG + DP + L G++EHGLFI I+
Sbjct: 175 QGNLIIDWGFGEMDDPSFFADRLSARAGIVEHGLFIGTASDIIVA 219
>gi|126179332|ref|YP_001047297.1| ribose 5-phosphate isomerase [Methanoculleus marisnigri JR1]
gi|125862126|gb|ABN57315.1| ribose-5-phosphate isomerase [Methanoculleus marisnigri JR1]
Length = 227
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 83/231 (35%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
M A KRNA RA + V DGM +G+GTGST M L +IA + +P+S
Sbjct: 1 MSAE--KRNAGYRAAEEVEDGMVVGLGTGSTVFFAMERLGKRIAEDRLSIAGVPTSYQAA 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + IPL S ++ +D++IDG D++D L LIKG G ALLREK + AA R +++
Sbjct: 59 IRARRYGIPLTSLDEYPELDIAIDGADQVDPALCLIKGRGAALLREKCVCDAAQRAVIVV 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D +K V+ L +P+E+ F V + G + LR G V+D GN+
Sbjct: 119 DGTKMVEALNA-PVPVEVLPFAVEAVSRR----LAALGADPVLREAVKKDGPVVTDNGNF 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDC--AIIGTSDGECLV 228
I+D FG I DP + + +IPG +E GLF + I+G G +V
Sbjct: 174 ILDCSFGTIADPGRLETAIASIPGTLECGLFSAYTEKITVIVGEEKGCSVV 224
>gi|67924416|ref|ZP_00517843.1| Ribose 5-phosphate isomerase [Crocosphaera watsonii WH 8501]
gi|67853728|gb|EAM49060.1| Ribose 5-phosphate isomerase [Crocosphaera watsonii WH 8501]
Length = 233
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 7/218 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A V +G+GTGST + + +++ +G + + +S E +
Sbjct: 8 MKQEVGKAAAARVKSDSIVGLGTGSTTAYAIQYIGERLQSGDLKNIIGVTTSFQAEVLAR 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
++IPL + + V +D++IDG DE+D + LIKG G A +EKI+ A +FIV+ D K
Sbjct: 68 KYNIPLSTLDVVDRIDIAIDGADEVDPQKNLIKGGGAAHTQEKIVDSLAEQFIVVVDGGK 127
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ V + L++ G +LR+ +G V+D GN +VD
Sbjct: 128 LVDKLGSTFLLPVEVIPKAVVPVMRKLEQ----LGGKPDLRMGVKKAGPVVTDQGNLVVD 183
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
F I DP + + NIPGV+E+GLF+ + D ++G
Sbjct: 184 VKFDSIDDPATLEKTINNIPGVLENGLFVGVTDVVLVG 221
>gi|254561493|ref|YP_003068588.1| Ribose-5-phosphate isomerase A [Methylobacterium extorquens DM4]
gi|254268771|emb|CAX24732.1| Ribose-5-phosphate isomerase A [Methylobacterium extorquens DM4]
Length = 236
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 137/213 (64%), Gaps = 1/213 (0%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M A +KR AA RAI V DG+ LG+GTGSTA F+ LL +++ G +V +P+S T
Sbjct: 1 MSAPDLKRAAAERAIPLVEDGIRLGIGTGSTAAAFIKLLGERVRAGLKVTGVPTSEATRI 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C+ IPL + ED+ +DL+IDG DE+D LRLIKG G ALLREKI+A A+ R +VI D
Sbjct: 61 ACEREGIPLATLEDLPELDLTIDGADEVDGSLRLIKGGGAALLREKIVAVASRRMVVIAD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
SK V+ LG LP+E++ FG+ T A++ + G E+ R + SG ++DGG+
Sbjct: 121 ASKHVETLGAFPLPVEVNLFGIGATTRAVEAAVARAGCTGEIARRHDASGVPLLTDGGHA 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
I+D G IPDP+ +S L +PGV+EHGLF+
Sbjct: 181 ILDLRLGRIPDPEALSAGLWAVPGVVEHGLFLG 213
>gi|149640640|ref|XP_001512073.1| PREDICTED: similar to Ribose-5-phosphate isomerase
(Phosphoriboisomerase) [Ornithorhynchus anatinus]
Length = 369
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 20 DGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
+ LG+G+GST + LA+++ + IP+S + + L + +
Sbjct: 154 NNQVLGIGSGSTIVHAVQRLAERVKQENLNIVCIPTSFQARQLILQNGLTLSDLDRHPEL 213
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF---LGRGMLPI 135
DL+IDG DE+DS L LIKG GG L +EKI+A A RFIVI D K +PI
Sbjct: 214 DLAIDGADEVDSDLNLIKGGGGCLTQEKIVAGYAKRFIVIADYRKDSKNLGDQWGKGIPI 273
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ AL FG ELR+ + +G V+D GN+++D F + ++
Sbjct: 274 EVIPMAYVPVTRALAR---KFGGVAELRMAVSKAGPVVTDNGNFLLDWKFDRVHKWSEVN 330
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ IPGV++ GLFI+M + G DG + ++
Sbjct: 331 TAIKMIPGVVDTGLFIDMAERVYFGMEDGSVSMRER 366
>gi|326502358|dbj|BAJ95242.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528191|dbj|BAJ89147.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 6/229 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
+KR AA RA++ V GM LG+GTGSTA + + +A G + +P+S+ T
Sbjct: 44 TQDDLKRLAAVRAVEQVQSGMVLGLGTGSTAAFAVAEIGALLATGKLSGIVGVPTSKRTF 103
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + +D +DL+IDG DE+D L L+KG GGALLREK++ A+ +F+V+
Sbjct: 104 EQAMSLGIPLSTLDDHPVIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASGKFVVVV 163
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DE+K V LG +P+E+ QF L+ + + G +LRL +G +V+D
Sbjct: 164 DETKLVTGLGGSGLAMPVEVVQFCWKHNQVRLQGLFNEEGCEAKLRLNEDGK-PYVTDNS 222
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
NYIVD +F I D E+ + GV+EHGLF+NM II S+G
Sbjct: 223 NYIVDLYFKTPIRDAVGAGMEIAALEGVVEHGLFLNMATSVIIAGSEGV 271
>gi|254373133|ref|ZP_04988622.1| ribose 5-phospate isomerase A [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570860|gb|EDN36514.1| ribose 5-phospate isomerase A [Francisella novicida GA99-3549]
Length = 224
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++K+ AA A + + +TLG+GTGST + L + + + V S +T
Sbjct: 8 NQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVN-YRDKIKTVVSSSEDSTRKL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +DL IDG DE ++ LIKG G AL REKI AA +FI I DE
Sbjct: 67 KAL-GFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LPIE+ + + ++ E+ ++D GN I+
Sbjct: 126 SKKVNTLGNFPLPIEVIPMARSYVARQIVKLGGQPVYREQT----------ITDNGNVIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
D + I +P + EL I GV+ +G+F + D I+ DG+
Sbjct: 176 DVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMAKKDGKIE 222
>gi|123969225|ref|YP_001010083.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str.
AS9601]
gi|123199335|gb|ABM70976.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. AS9601]
Length = 231
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 8/228 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ A AI+ V M LG+G+GSTA + LAD++ +G ++ + +S +E
Sbjct: 1 MKQVVADAAIREVKSDMILGLGSGSTAALMIKSLADEMRSGKLQNIRGVATSFQSEVLAL 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL VS +DL+IDG DE+D +LIKG G +REK++A + + +++ DE+K
Sbjct: 61 ELNIPLIDLASVSQIDLAIDGADEVDPGFQLIKGGGACHVREKLVASKSDQLLIVVDETK 120
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V L LP+E+ + +EV S + LR+ +G V+D GN ++D
Sbjct: 121 LVQNLNLSFPLPVEVLPNAWKQV----QEVISEMNGSSSLRMANKKAGPVVTDQGNLVLD 176
Query: 183 AFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
F I +P+ I + NIPGV+E+GLF+++ D ++G + V+
Sbjct: 177 VLFNDGIKNPKDIEKTINNIPGVLENGLFVDLTDKVLVGKIENNTPVV 224
>gi|187478736|ref|YP_786760.1| ribose-5-phosphate isomerase A [Bordetella avium 197N]
gi|123514542|sp|Q2KYQ1|RPIA_BORA1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|115423322|emb|CAJ49856.1| ribose-5-phosphate isomerase [Bordetella avium 197N]
Length = 224
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 81/232 (34%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
Q+K+ AA A+++V + +G+GTGSTA F+ LA G + SS
Sbjct: 3 TQQQLKQQAADAALEFVEQVAGPDVIIGVGTGSTADLFIDGLARF--AGRIRGTVASSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H + + DV + + +DG DEID+ L +IKG GGAL REKI+A A RFI
Sbjct: 61 SAQRLASHGLLVLDLNDVQYMPIYVDGADEIDANLHMIKGGGGALTREKIVASVAERFIC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK VD LG LP+E+ + G LR FV+D G
Sbjct: 121 IADESKLVDRLGAFPLPLEVIPMARAAVAR----SLAALGGEPRLREG------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
N I+D I D + + NIPGV+ GLF + D A++ T +G +
Sbjct: 171 NIILDVHGLSINDAPALEARVNNIPGVVTCGLFSLAGADVALLATQNGIRRL 222
>gi|224108353|ref|XP_002314818.1| predicted protein [Populus trichocarpa]
gi|222863858|gb|EEF00989.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 132/236 (55%), Gaps = 7/236 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A+++V GM LG+GTGSTAK + +AD + G + IP+S+ T
Sbjct: 31 TQDELKKIAAYKAVEFVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTH 90
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + VDL+IDG DE+DS L L+KG GG+LLREK+I A +FIVI
Sbjct: 91 QQAVSLGIPLSDLDSHPIVDLAIDGADEVDSNLNLVKGRGGSLLREKMIESACKKFIVIV 150
Query: 120 DESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS--GLFVSDG 176
DESK V +G G +P+E+ F T L+ + G +LR G +FV+D
Sbjct: 151 DESKLVPHVGACGAMPVEVVPFCWKFTQDKLQSLFDYAGCVAKLRSNNGGEDGEIFVTDN 210
Query: 177 GNYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GNYIVD FF + D +I S + + G +EHG+F++M I+ G + K
Sbjct: 211 GNYIVDLFFKKDVGDLKIASDAILRLAGAVEHGMFLDMATTVIVAGELG-ITIKNK 265
>gi|160899421|ref|YP_001565003.1| ribose-5-phosphate isomerase A [Delftia acidovorans SPH-1]
gi|160365005|gb|ABX36618.1| ribose 5-phosphate isomerase [Delftia acidovorans SPH-1]
Length = 230
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A+ YVV G +G+GTGST +F+ LA I + V S +TE
Sbjct: 9 SQDELKALVGQAALAYVVPGEIVGVGTGSTVNKFIDALA-TIKDQIPGAVSSSVASTERL 67
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + +V+S+ + IDG DEID R ++KG G AL REKI+A A RF+ I D
Sbjct: 68 KAL-GINVLDANEVASLSVYIDGADEIDGRGYMVKGGGAALTREKIVAALAERFVCIADA 126
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SKRV+ LG LP+E+ + + K G E+R+ V+D G +I+
Sbjct: 127 SKRVEVLGDFPLPVEVIPMAAAQIANHFK----AMGGRAEIRM--KDGAPLVTDNGQHIL 180
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
D I +P E+ PGV+ G+F + ++GT +G +
Sbjct: 181 DVRGLKIAEPLAFESEVNQWPGVVTVGVFAHQKASVCLLGTPEGVQTL 228
>gi|221067200|ref|ZP_03543305.1| ribose 5-phosphate isomerase [Comamonas testosteroni KF-1]
gi|220712223|gb|EED67591.1| ribose 5-phosphate isomerase [Comamonas testosteroni KF-1]
Length = 244
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A++YVV G +G+GTGST +F+ LA I + V S +TE
Sbjct: 21 SQDELKTLVGQAALKYVVAGEIVGVGTGSTVNKFIDALA-TIKDQIPGAVSSSVASTERL 79
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + +V+S+ + IDG DEID + ++KG G AL REKI+A A RF+ I DE
Sbjct: 80 KAL-GIKVFDANEVTSLAVYIDGADEIDGKGHMVKGGGAALTREKIVAALAQRFVCIADE 138
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SKRV LG LP+E+ + + G + ++R V+D G +I+
Sbjct: 139 SKRVPVLGNFPLPVEVIPMAAAQIARRFE----AMGADVTAQIRMKDGAPLVTDNGQHIL 194
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
D I +P E+ PGV+ G+F + ++GT+ G +
Sbjct: 195 DVRGLKIAEPLAFESEVNQWPGVVTVGVFAHQKAAVCLLGTAQGVQTL 242
>gi|119899116|ref|YP_934329.1| ribose-5-phosphate isomerase A [Azoarcus sp. BH72]
gi|166200031|sp|A1K9D7|RPIA_AZOSB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|119671529|emb|CAL95442.1| putative ribose 5-phosphate isomerase [Azoarcus sp. BH72]
Length = 222
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA A+ YV DGM +G+GTGST F+ LA I + R V S +++
Sbjct: 1 MTQDELKKAAALAALDYVEDGMIVGVGTGSTVNHFIDGLAG-IKHRIRGAVSSSEASSKR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I L DV + + IDG DEID +IKG GGAL REKI+A A RF+ I D
Sbjct: 60 L-AAHGIALLDLNDVDELPVYIDGADEIDHGFAMIKGGGGALTREKIVAAVARRFVCICD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESKRVD LGR LPIE+ ++ + A L RLR FV+D GN I
Sbjct: 119 ESKRVDVLGRFPLPIEVIPMARSQVMRA------AAALGATPRLREG----FVTDNGNLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
+D I DP L + GV+ +GLF D ++ ++ G
Sbjct: 169 IDLHGLSITDPCATEQALNAVVGVVTNGLFAARGADTLLLASAQGVRR 216
>gi|326428209|gb|EGD73779.1| ribose-5-phosphate isomerase [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 7 KRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
K AA A+ +V D +G+G+GST + LA+++ VQ +P+S +
Sbjct: 25 KLRAAYAAVDRHVKDKQVIGIGSGSTIVFAVDRLAERVREENLTVQCVPTSFQAIQLIRQ 84
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
H++PL +D++IDG DE+ L IKG GG L++EKI+A+ + F++I D SK
Sbjct: 85 HNLPLSDLSATPKIDVAIDGADEMTPDLACIKGGGGCLVQEKIVAYNSDTFVLIADGSKE 144
Query: 125 VDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
D LG +PIE+ ++ G +LR+ + +G V+D GN+I+
Sbjct: 145 SDALGTKWTRGVPIEVIPMAYVPI----QKQLEGMGATAKLRMATSKAGPCVTDNGNFII 200
Query: 182 DAFFGFIP----DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
DA FG + P + LC IPGV++ GLF+ M A IG DG
Sbjct: 201 DAHFGALQGDSLAPAALEKTLCMIPGVVDCGLFVGMAKEAFIGREDGTV 249
>gi|264678376|ref|YP_003278283.1| dihydroorotate dehydrogenase [Comamonas testosteroni CNB-2]
gi|262208888|gb|ACY32986.1| dihydroorotate dehydrogenase [Comamonas testosteroni CNB-2]
Length = 232
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K + A++YVV G +G+GTGST +F+ LA I + V S +TE
Sbjct: 9 SQDELKTLVGQAALKYVVAGEIVGVGTGSTVNKFIDALA-TIKDQIPGAVSSSVASTERL 67
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + +V+S+ + IDG DEID + ++KG G AL REKI+A A RF+ I DE
Sbjct: 68 KAL-GIKVFDANEVTSLAVYIDGADEIDGKGHMVKGGGAALTREKIVAALAQRFVCIADE 126
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SKRV LG LP+E+ + + G + ++R V+D G +I+
Sbjct: 127 SKRVPVLGNFPLPVEVIPMAAAQIARRFE----AMGADVTAQIRMKDGAPLVTDNGQHIL 182
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
D I +P E+ PGV+ G+F + ++GT+ G +
Sbjct: 183 DVRGLKIAEPLAFESEVNQWPGVVTVGVFAHQKAAVCLLGTAQGVQTL 230
>gi|300122772|emb|CBK23789.2| unnamed protein product [Blastocystis hominis]
gi|300175043|emb|CBK20354.2| unnamed protein product [Blastocystis hominis]
Length = 228
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
M+ ++K+ AA A++ V G +G+GTGSTA + L + G + + +S T
Sbjct: 1 MNMNELKKRAAVEAVKQVKSGNVVGLGTGSTAYFAVEELGRLLREGILKDIVGVATSIET 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + +IP+ + V S+DL+IDG DE+D L+LIKG G ALLREK S+FIVI
Sbjct: 61 DTHARSLNIPMTDIDSVDSIDLAIDGADEVDPDLQLIKGKGAALLREKSTEILTSKFIVI 120
Query: 119 GDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
DESK V + +P+EI FG +T L + L + + S V+D G
Sbjct: 121 VDESKIVSKLGTKDAVPVEITPFGWKQTQKRLSKYGEA-VLRPS---KEDASKPLVTDNG 176
Query: 178 NYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
NYI+D F I +P+ + EL I GV++HGLFI+M +G
Sbjct: 177 NYIIDLRFPEGISNPKEMDKELKLITGVVDHGLFIDMAHSVGLGMES 223
>gi|307708525|ref|ZP_07644990.1| ribose 5-phosphate isomerase A [Streptococcus mitis NCTC 12261]
gi|307615441|gb|EFN94649.1| ribose 5-phosphate isomerase A [Streptococcus mitis NCTC 12261]
Length = 227
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DSR IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDVVDVTVDGADEVDSRFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I DP EL +I GV+EHGLF MVD I+ DG ++
Sbjct: 176 LALDVIEDPIAFGQELDHIVGVVEHGLFNQMVDKVIVAGRDGVQILTS 223
>gi|226506734|ref|NP_001149838.1| ribose-5-phosphate isomerase [Zea mays]
gi|195634965|gb|ACG36951.1| ribose-5-phosphate isomerase [Zea mays]
Length = 257
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 98/243 (40%), Positives = 132/243 (54%), Gaps = 14/243 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA++ V MTLG+GTGSTA + L D + G V +P+S TE
Sbjct: 15 TQDELKRLAAHRAVELVEPCMTLGLGTGSTAAHALDRLGDLLRAGALPGVSGVPTSLKTE 74
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL D +S+ LSIDG DE+D L L+KG GG+LLREK++ A +RF VI
Sbjct: 75 AHAARVGIPLLPL-DAASIALSIDGADEVDPDLNLVKGRGGSLLREKMVEGAGARFAVIV 133
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSG------- 170
DESK V G +P+E+ FG TL ++ + G + LR G
Sbjct: 134 DESKLVPRLGCTGAVPVEVVPFGAPHTLGLIRGLFHGLPGFHARLRTTTVPEGEQGSEQQ 193
Query: 171 LFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
FV+D GNYIV+ FF G D + IS L I GV+EHG+F+ M AI+ DG V
Sbjct: 194 PFVTDNGNYIVEMFFDGGIRGDLRDISDRLLRITGVVEHGMFLGMATVAIVAKKDGTVAV 253
Query: 229 LQK 231
+++
Sbjct: 254 MER 256
>gi|33593333|ref|NP_880977.1| ribose-5-phosphate isomerase A [Bordetella pertussis Tohama I]
gi|41017675|sp|Q7VWC1|RPIA_BORPE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33572689|emb|CAE42612.1| ribose 5-phosphate isomerase a [Bordetella pertussis Tohama I]
gi|332382742|gb|AEE67589.1| ribose-5-phosphate isomerase A [Bordetella pertussis CS]
Length = 226
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 116/235 (49%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ AA A++ V + +G+GTGSTA F+ LA G + SS
Sbjct: 3 TQQELKQQAADAALELVEQVAGPDVIIGVGTGSTADLFIDGLA--CFKGRLRGTVASSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H + + DV S+ + +DG DEID L +IKG GGAL REKI+A A R+I
Sbjct: 61 SAARLAGHGLAVLDLNDVQSMPIYVDGADEIDPNLHMIKGGGGALTREKIVASVARRYIC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V+ LGR LP+E+ N S G LR FV+D G
Sbjct: 121 IADESKLVERLGRFPLPVEVIPMARNAVAR----GLSRLGGQPALREG------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
N I+D I D + + +IPGV+ GLF + D A++ T DG + ++
Sbjct: 171 NIILDVAGLSIADAPGLEKTINDIPGVVTCGLFALAGADVALLATQDGIRRLERR 225
>gi|56461203|ref|YP_156484.1| ribose-5-phosphate isomerase A [Idiomarina loihiensis L2TR]
gi|67461321|sp|Q5QVB3|RPIA_IDILO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|56180213|gb|AAV82935.1| Ribose 5-phosphate isomerase [Idiomarina loihiensis L2TR]
Length = 223
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 13/215 (6%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
+QY+ DG +G+GTGST F+ LA++ + V S +TE K H I +
Sbjct: 17 MQYIEDGTVVGVGTGSTVNFFIDALAER-KHDIEGAVSSSEASTERL-KSHGIEVFELNS 74
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
V V + +DG DEI +++KG GGAL REKIIA A +F+ + DESK V LG+ +P
Sbjct: 75 VVEVPIYVDGADEITEHGQMVKGGGGALTREKIIAAVARKFVCVADESKMVGRLGQFPVP 134
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + + + G + R F +D GN+I+D I +P +
Sbjct: 135 VEVIPMARSYVAREIVK----LGGDPVWRQG------FTTDNGNWILDVHNFDIMEPMKL 184
Query: 195 SGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
EL NI GV+ +GLF D A+I DG +
Sbjct: 185 EAELNNIVGVVTNGLFAQRGADIALIAREDGVQTL 219
>gi|300811369|ref|ZP_07091865.1| ribose 5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497604|gb|EFK32630.1| ribose 5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 230
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ-VIPSSRNTENFCKIHHIPLHSPEDV 75
V +GM LG+GTGST K F+ L K A G ++ V+ +S ++ + + + +V
Sbjct: 20 LVEEGMVLGIGTGSTVKFFIDELGKKKAAGLTLKAVVTTSSRSQKQLEGYGFTVSPLSEV 79
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
VDL++DG D +D +L IKG G AL EK +A + + + I DESK VD L LP+
Sbjct: 80 DQVDLTVDGADRVDKQLNGIKGGGAALTLEKNVAVNSKKNVWIVDESKVVDHLSGFALPV 139
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + ++ + GL E RL +G + GNYI+D IP P ++
Sbjct: 140 EVLPISCMQV----EKRLADEGLKPEFRLTEDG-QRLKTHYGNYILDLKLDRIPVPSGLA 194
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
L + GV+EHGLF+N+ D II +GE V +
Sbjct: 195 DYLDHTVGVVEHGLFLNICDQVIIARDNGEIEVRSR 230
>gi|260663241|ref|ZP_05864133.1| ribose 5-phosphate isomerase A [Lactobacillus fermentum 28-3-CHN]
gi|260552433|gb|EEX25484.1| ribose 5-phosphate isomerase A [Lactobacillus fermentum 28-3-CHN]
Length = 228
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 7/230 (3%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNT 58
M+ +K+ + A + V +GM +G+GTGST + + L ++ G + + +S T
Sbjct: 1 MNQQDSLKQLVGQTAAKLVKNGMIVGLGTGSTVRFLVDALGKRVQEEGLAITGVTTSNRT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
I + +DV VDL+IDG DE+D IKG GGALL EKI+ A++ + I
Sbjct: 61 TAQATSLGIKIVDLDDVDHVDLTIDGADEVDRDFYGIKGGGGALLWEKIVNDASTNNVWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD +G +P+E+ FG +K + + G + R G L+ +D N
Sbjct: 121 VDQSKVVDRIGAFGVPVEVIPFGASKVFAKFEHQ----GYQPQWRTDEAG-QLYRTDENN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
YI+D G + DP ++ +L N GV+E+GLF+N V+ I+G G +
Sbjct: 176 YIIDLKLGPLTDPLALAEDLINTVGVVEYGLFLNRVNQVIVGNEAGITTL 225
>gi|322434073|ref|YP_004216285.1| ribose 5-phosphate isomerase [Acidobacterium sp. MP5ACTX9]
gi|321161800|gb|ADW67505.1| ribose 5-phosphate isomerase [Acidobacterium sp. MP5ACTX9]
Length = 223
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 88/227 (38%), Positives = 134/227 (59%), Gaps = 7/227 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K ARRA+++V DGM +G+GTG+TA F+ LA++ +++ + SS + N
Sbjct: 1 MTQDEAKAAVARRAVEFVEDGMRVGLGTGTTATMFIRALAER---KPKIRCVASSDASFN 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + ++ +D+ IDG DE+ L LIKG GGALLREKI+A AA RF+V+ D
Sbjct: 58 LGAELGLDMMTLNELPEIDVYIDGADEVGPGLALIKGGGGALLREKIVASAAKRFVVVVD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V+ LG+ LPIE+ + + L GL + R ++G G +++D GN+I
Sbjct: 118 SSKVVECLGKFPLPIEVIKMALPLVLPK----LEALGLEPKQRRAKSGDGPYLTDEGNFI 173
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
VD F G I DP +++ E+ I GV+EHGLF+ M A++ DG
Sbjct: 174 VDCFVGKIADPVMVAAEVRAIVGVVEHGLFLGMAQVALVAGEDGVTE 220
>gi|157129892|ref|XP_001661804.1| ribose-5-phosphate isomerase [Aedes aegypti]
gi|108872043|gb|EAT36268.1| ribose-5-phosphate isomerase [Aedes aegypti]
Length = 271
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 9/233 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENF 61
K+ AA +A+ YV D +G+G+GST + LA+++ G ++ IP+S
Sbjct: 41 DLAKKIAAFKAVDEYVRDNTVVGVGSGSTVVYAVQRLAERVKTEGLKLVCIPTSFQARQL 100
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ L E + +IDG DE+D+ + LIKG GG LL+EKI+A A + +VI D
Sbjct: 101 IIESGLVLGDLEQHPKIHCAIDGADEVDADMVLIKGGGGCLLQEKIVASCADQLVVIADY 160
Query: 122 SKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+K + +PIE+ + +VA+ +G + +LR+ +G V+D GN
Sbjct: 161 TKNSKKLGEQYKKGIPIEVVPMAYVPIRN---KVAAKYGGSLKLRMAVAKAGPVVTDNGN 217
Query: 179 YIVDAFFGFIP-DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+I+D F D +++ ++ IPGV+E GLF+ M A G +DG
Sbjct: 218 FILDWHFPEEKFDWDVVNRDIMMIPGVVETGLFVKMATKAYFGLADGSVTERS 270
>gi|115457638|ref|NP_001052419.1| Os04g0306400 [Oryza sativa Japonica Group]
gi|38347196|emb|CAD40521.2| OSJNBa0023J03.8 [Oryza sativa Japonica Group]
gi|113563990|dbj|BAF14333.1| Os04g0306400 [Oryza sativa Japonica Group]
gi|116308924|emb|CAH66053.1| OSIGBa0125J07.2 [Oryza sativa Indica Group]
gi|116309106|emb|CAH66212.1| OSIGBa0096F13.7 [Oryza sativa Indica Group]
gi|125589807|gb|EAZ30157.1| hypothetical protein OsJ_14213 [Oryza sativa Japonica Group]
gi|215737154|dbj|BAG96083.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 275
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 96/242 (39%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA++ V GMTLG+GTGSTA + L D + +G V +P+S TE
Sbjct: 33 TQEELKRVAAHRAVEMVEPGMTLGLGTGSTAAHALDRLGDLLRSGELAAVAGVPTSLKTE 92
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+ + +DLSIDG DE+D L L+KG GG+LLREK+I + RF+VI
Sbjct: 93 AHAARVGIPMLPLGEAGGIDLSIDGADEVDPELNLVKGRGGSLLREKMIEGSGGRFVVIV 152
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR-------NGSGL 171
DESK V G +P+E+ FG + TL +++V RLR +
Sbjct: 153 DESKLVPRLGCTGAVPVEVVPFGCDHTLGLVRKVFDGLPGF-SARLRTVASKDGEGKEEM 211
Query: 172 FVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FV+D GNYIV+ FF G D IS L I GV+EHG+F+ M ++ DG +L
Sbjct: 212 FVTDNGNYIVEMFFEDGIRGDLNEISDRLLRITGVVEHGMFLGMATSVVVAKKDGTVALL 271
Query: 230 QK 231
K
Sbjct: 272 HK 273
>gi|297838927|ref|XP_002887345.1| hypothetical protein ARALYDRAFT_894942 [Arabidopsis lyrata subsp.
lyrata]
gi|297333186|gb|EFH63604.1| hypothetical protein ARALYDRAFT_894942 [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 133/239 (55%), Gaps = 10/239 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A+++V GM +G+GTGSTAK + +++ + G + IP+S T
Sbjct: 28 TQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLQEGKLKDIIGIPTSTTTH 87
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + VDLSIDG DE+D L L+KG GG+LLREK+I A+ +F+VI
Sbjct: 88 EQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKFVVIV 147
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG----LFV 173
DESK V ++G +P+E+ F + T L+E+ G +LR++ +G V
Sbjct: 148 DESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFREAGCVAKLRMKIGSNGGDATPAV 207
Query: 174 SDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D GNY+VD + I D ++ S + PGV+EHG+F+ M I+ G V +
Sbjct: 208 TDNGNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFG-VTVKDR 265
>gi|320170365|gb|EFW47264.1| ribose-5-phosphate isomerase [Capsaspora owczarzaki ATCC 30864]
Length = 254
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 8/216 (3%)
Query: 20 DGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
DGMT+G+G+GST + + +++ ++ IP+S + L S++
Sbjct: 42 DGMTIGVGSGSTIVYAVERIVERVKAENLKLVCIPTSFQARQLIVEGGLVLSDLSRHSAI 101
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF---LGRGMLPI 135
D++IDG DE D++L IKG G +L+EKI+A+ A RF+V+ D K+ + + +PI
Sbjct: 102 DVAIDGADEADAQLNCIKGGGACMLQEKIVAYNAKRFVVVADFRKKSETLGQQWKAGVPI 161
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ L FG LR+ + +G V+D GN++VD FG I DP +
Sbjct: 162 EVIPLAYVPVLRK----LESFGGKPVLRMAKAKAGPVVTDNGNFVVDCDFGLIQDPAALD 217
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ +IPGV+E GLF+NM + A G DG K
Sbjct: 218 KRIASIPGVVETGLFVNMAEKAFFGMQDGTVETRTK 253
>gi|238899105|ref|YP_002924787.1| ribose-5-phosphate isomerase A, constitutive [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229466865|gb|ACQ68639.1| ribose-5-phosphate isomerase A, constitutive [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 218
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ + A+ YV M +G+GTGST F+ L I + V S +T
Sbjct: 1 MTQDEMKKAVSLVALNYVKSDMIVGIGTGSTVTHFIHALG-SIKELVKGAVSSSEDSTRK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IP+ +V +D+ +D DE++ ++IKG G AL REK+I+ A +FI I D
Sbjct: 60 LN-NIGIPVLDTNEVDIIDIYVDSADEVNHHKQMIKGGGAALTREKVISSMAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K+V+ LG+ LPIE+ + E R ++D N I
Sbjct: 119 HTKKVNILGQFPLPIEVIPMARSYVARE----LVKLRGLPEYRQG------VITDNANII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQ 230
+D + P + ++ I GV+ GLF + D +I TS+ +++
Sbjct: 169 LDVRHLNMAHPIHLENKINAIAGVVTVGLFALRPADLVLIATSN-TVEIME 218
>gi|309782304|ref|ZP_07677031.1| ribose 5-phosphate isomerase A [Ralstonia sp. 5_7_47FAA]
gi|308918922|gb|EFP64592.1| ribose 5-phosphate isomerase A [Ralstonia sp. 5_7_47FAA]
Length = 228
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 111/230 (48%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 59 ASTRRLQGHGFTVLDLNEVDAIPVYVDGADEIDASGAMIKGGGGALTREKIVASVAKVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ +G LP+E+ + G LR+ + G ++ +D
Sbjct: 119 CIADGSKLVETMGAFPLPVEVVPMARAAVARQ----LAALGGQPRLRMTKEG-QIYKTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I DP+ + + IPGV+ GLF + ++GT G
Sbjct: 174 GNVIIDVVGLRIADPKGLESVVNEIPGVVTVGLFAKRGANVLLLGTEAGV 223
>gi|150399257|ref|YP_001323024.1| ribose-5-phosphate isomerase A [Methanococcus vannielii SB]
gi|166200055|sp|A6UPJ0|RPIA_METVS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150011960|gb|ABR54412.1| ribose 5-phosphate isomerase [Methanococcus vannielii SB]
Length = 239
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 10/233 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSRNTEN 60
D+ +K A+ A + + D M +G+G+GSTA F+ L + I + +P+S ++
Sbjct: 14 DSDSLKIKVAKEAAKLIKDEMVVGLGSGSTANLFIQELGKRVIEEELYIYGVPTSFDSRM 73
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL S + +D++IDG DEID LIKG GG EKI+ + A F+V+
Sbjct: 74 MANQSGIPLISLDQCGEIDIAIDGADEIDKKTFSLIKGGGGCHTMEKIVDYYAKEFVVLA 133
Query: 120 DESKRVDFLGRGML-PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK VD LG P+E+ F + LS +R G ++D GN
Sbjct: 134 DESKMVDSLGENTPVPLEVIPFSYSTVLSK----LLKINAAPAIRSGSGKMGPVITDNGN 189
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D F I D + L +IPGV+E+G+F D +IGTS + VL+K
Sbjct: 190 MIIDV-FINIEDAEETETMLNSIPGVLENGIFT-KCDKVLIGTSK-KVEVLKK 239
>gi|319794391|ref|YP_004156031.1| ribose 5-phosphate isomerase [Variovorax paradoxus EPS]
gi|315596854|gb|ADU37920.1| ribose 5-phosphate isomerase [Variovorax paradoxus EPS]
Length = 237
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 74/227 (32%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K A+ YVV G +G+GTGST +F+ LA I + + V S +TE
Sbjct: 15 SQDELKTQVGLAALAYVVKGEIVGVGTGSTVNKFIDALA-TIKDEIKGAVSSSVASTERL 73
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ I + +V + + IDG DEID R ++KG G AL REKI+A + RF+ I D
Sbjct: 74 RAL-GIQVFDSNEVEELAVYIDGADEIDHRGFMVKGGGAALTREKIVAAQSKRFVCIADA 132
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V+ LG LP+E+ V + + L ++R V+D G +IV
Sbjct: 133 SKLVETLGAFPLPVEVVPMAVRRVMRQFAS------LGGISQVREKDGLPLVTDNGQHIV 186
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECL 227
D I DP E+ PGV+ G+F + D ++GT+ G
Sbjct: 187 DVTGLQIADPLAFESEVSQWPGVVTVGVFAHQKADVCLLGTATGVKT 233
>gi|300172577|ref|YP_003771742.1| ribose 5-phosphate isomerase A [Leuconostoc gasicomitatum LMG
18811]
gi|299886955|emb|CBL90923.1| ribose 5-phosphate isomerase A [Leuconostoc gasicomitatum LMG
18811]
Length = 227
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 121/231 (52%), Gaps = 7/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M K A RRA ++V + M +G+G+GST + L +++A ++ + +S T
Sbjct: 1 MSTDLQKIIAGRRATEFVQNDMVVGIGSGSTIAHVIDSLGERVAQENLKIVGVATSERTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+++ +DV +DL+IDG D+I IKG G ALL EKI+A + I +
Sbjct: 61 RHAAQLGIPMYNVDDVDKIDLTIDGADQIADDFSAIKGGGAALLWEKIVAFNSRENIWVV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D +KRV L + LP+E+ +G N+ + G + RL +NG +D N+
Sbjct: 121 DATKRVSKLNQ-YLPVEVIPYGSNQLFKRFQ----ADGFHPSWRLDQNG-NPVRTDSANF 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++D I +P+ + EL + GV+EHGLF ++V+ +IG D V+
Sbjct: 175 LIDLHLPIIENPRELGDELIRMVGVVEHGLFTDVVNRVVIGEDDHTAKVVS 225
>gi|167919125|ref|ZP_02506216.1| ribose-5-phosphate isomerase A [Burkholderia pseudomallei BCC215]
Length = 231
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A +YV + G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGEAAARYVTENVPQGAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDGGGAMIKGGGGALTREKIVASVAETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 119 CIADASKRVAVLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGA-PYVTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PGV+ GLF D ++GT G +
Sbjct: 174 GNEILDVKGLRIDDPRALEAAINGWPGVVTVGLFAQRGADLCLLGTERGVETLR 227
>gi|114327522|ref|YP_744679.1| ribose 5-phosphate isomerase [Granulibacter bethesdensis CGDNIH1]
gi|114315696|gb|ABI61756.1| ribose 5-phosphate isomerase [Granulibacter bethesdensis CGDNIH1]
Length = 230
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 118/231 (51%), Gaps = 10/231 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD +KR A A V DGM +G+GTGSTA + L ++A G ++ IP+S T
Sbjct: 1 MDTDALKRLAGEEAAALVQDGMVVGLGTGSTAACMVDALIRRVAQGLKIVGIPTSLRTAE 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL +DL+IDG D+++ L LIKG GGALLREK++A A+ R ++I
Sbjct: 61 QAQAGGIPLTDLGAHPRIDLTIDGADQVERGTLNLIKGMGGALLREKLVAAASERLVIIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+ K + L +P+E+ FG T G LR +G+ +V+D NY
Sbjct: 121 DDRKLSENL-SLPVPVEVVPFGWQAT----DLRIQALGGRTVLRGGADGT-PYVTDNHNY 174
Query: 180 IVDAFFGFIP---DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I+D FG + P+ + L I GV+E G FI+ + II G
Sbjct: 175 ILDVDFGAMGGSRKPETLDAALREIVGVVETGFFIHRAETVIIAGEGGVTR 225
>gi|331231070|ref|XP_003328199.1| ribose-5-phosphate isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309307189|gb|EFP83780.1| ribose-5-phosphate isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 311
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 7 KRNAARRAIQ-YVVDGM-TLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
K+ AA A+ +++ +G+G+GST + + + IP+ ++
Sbjct: 45 KQLAAYAAVDQHILPHHRVIGIGSGSTVPYVVERIVQQGHETNESRWFIPTGFQSKELIV 104
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ L + +D+++DG DE+D+ L IKG G LREK++A AA +FI++ D K
Sbjct: 105 KAGLNLGDVDQFPRLDITLDGADEVDADLNAIKGGGACHLREKVLAEAADKFILVADARK 164
Query: 124 RVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
R +PIE+ F K +S ++ + LR+ ++ +G V+D GN++
Sbjct: 165 DSALLGTNWRAGVPIEVVPFAWAKVMSNIQLMGCPH---PTLRMGKSKAGPVVTDNGNFV 221
Query: 181 VDAFFGFI--PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+DA F I DP +S L + GV+E GLF M A G SDG + K
Sbjct: 222 IDAPFDDIYMRDPSELSYRLKMLTGVLEVGLFCGMAQEAYFGNSDGTVTIRSK 274
>gi|332142376|ref|YP_004428114.1| ribose-5-phosphate isomerase A [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552398|gb|AEA99116.1| ribose-5-phosphate isomerase A [Alteromonas macleodii str. 'Deep
ecotype']
Length = 218
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD K+ A+ AI YV +G+GTGST F+ L KI + V S +T
Sbjct: 1 MDQNAKKQAVAKAAIDYVESDSIVGVGTGSTVNFFIEELG-KIKHKIEGAVSSSEASTAR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + +VS++ + IDG DE+ +IKG G AL REKI+A AA+ F+ I D
Sbjct: 60 LKAL-GIEVFALNEVSNLSVYIDGADEVTEHKHMIKGGGAALTREKIVAGAATTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E+KRV LG LP+E+ + G + E R ++D GN I
Sbjct: 119 ETKRVPVLGAFPLPVEVIPMARSFVARE----LVKLGGDPEYRQG------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+D I +P+ + ++ NIPGV+ +G+F + D + T +G
Sbjct: 169 LDVHNLEILNPRELEQKINNIPGVVTNGIFALRGADIVLSATENGVET 216
>gi|170035968|ref|XP_001845838.1| ribose-5-phosphate isomerase [Culex quinquefasciatus]
gi|167878437|gb|EDS41820.1| ribose-5-phosphate isomerase [Culex quinquefasciatus]
Length = 235
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
M Q K+ AA +A+ YV + +G+G+GST + LA+++ G R+ IP+S
Sbjct: 1 MSLEQAKKIAAFKAVDEYVRNDTVVGVGSGSTVVYAVQRLAERVKAEGLRLVCIPTSFQA 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ L E +D +IDG DE+D+ + LIKG GG LL+EKI+A A++ IVI
Sbjct: 61 RQLIIDAGLVLGDLEQNPRIDCAIDGADEVDADMVLIKGGGGCLLQEKIVASCAAQLIVI 120
Query: 119 GDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D +K + +P+E+ +A+ +G +LR+ +G V+D
Sbjct: 121 ADYTKDSKRLGEQYKKGIPVEVVPMAYVPIR---DRIAAKYGGKLQLRMAVAKAGPVVTD 177
Query: 176 GGNYIVDAFFGF-IPD-PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
GN+I+D F I + I+ ++ IPGV+E GLF+ M A G +DG +
Sbjct: 178 NGNFILDWHFPDTIVNGWDEINRDIMMIPGVVETGLFVKMATKAYFGLADGSVIERS 234
>gi|103485587|ref|YP_615148.1| ribose 5-phosphate isomerase [Sphingopyxis alaskensis RB2256]
gi|123253722|sp|Q1GX07|RPIA_SPHAL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|98975664|gb|ABF51815.1| ribose-5-phosphate isomerase [Sphingopyxis alaskensis RB2256]
Length = 228
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 131/225 (58%), Gaps = 7/225 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AA RA+ V DGM +G+GTGSTA + L+++I +G R+ + +S+ TE
Sbjct: 8 KSIAAVRAVDEVRDGMLVGLGTGSTAAYAVKSLSERIKHGLRITAVATSQATEALALRLA 67
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+PL + +S+VDL+IDG DEID R + IKG GGALLREKI A++R I+I D SK V
Sbjct: 68 VPLVPFQQLSAVDLTIDGADEIDDRFQAIKGGGGALLREKITESASTRVIIIADSSKLVA 127
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG+ LP+E+ F + L L + +R G F++D GNYI+DA
Sbjct: 128 QLGKFPLPVEVVPFATEFVRARLSA------LGARVTVREAGGTPFLTDQGNYILDAALD 181
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IP P+ I+ + IPGV+EHGLF++ +D +I D V +
Sbjct: 182 EIPRPREIAAAITTIPGVLEHGLFLDEIDTIMIARGD-MVEVRHR 225
>gi|257095549|ref|YP_003169190.1| ribose 5-phosphate isomerase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048073|gb|ACV37261.1| ribose 5-phosphate isomerase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 220
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ A A+ +VVDG +G+GTGSTA F+ LA + SS T
Sbjct: 1 MTQDEMKKAVAHAALAHVVDGKIVGVGTGSTANCFIDALAA--IKHRIGGAVASSEATRQ 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I + ++V + + +DG DEI++ +++IKG GGAL REKI+A A +F+ I D
Sbjct: 59 RLASHGIAVFDLDEVEELPVYVDGADEINAAMQMIKGGGGALTREKIVAAVARKFVCIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V LGR LP+E+ + + G LRR G FV+D GN I
Sbjct: 119 GSKLVPVLGRFPLPVEVIPMALGHVRRE----LAKIGGTP---LRRAG---FVTDNGNLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
VD I DP + + I GV+ +GLF D ++GT+DG +
Sbjct: 169 VDVGGLPIADPVELETRINQIVGVVTNGLFACRPADVCLLGTADGVRTL 217
>gi|118497775|ref|YP_898825.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
novicida U112]
gi|194323747|ref|ZP_03057523.1| ribose 5-phosphate isomerase A [Francisella tularensis subsp.
novicida FTE]
gi|208779838|ref|ZP_03247182.1| ribose 5-phosphate isomerase A [Francisella novicida FTG]
gi|254374585|ref|ZP_04990066.1| ribose-5-phosphate isomerase A [Francisella novicida GA99-3548]
gi|166200042|sp|A0Q756|RPIA_FRATN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|118423681|gb|ABK90071.1| ribose 5-phospate isomerase A [Francisella novicida U112]
gi|151572304|gb|EDN37958.1| ribose-5-phosphate isomerase A [Francisella novicida GA99-3548]
gi|194322111|gb|EDX19593.1| ribose 5-phosphate isomerase A [Francisella tularensis subsp.
novicida FTE]
gi|208744293|gb|EDZ90593.1| ribose 5-phosphate isomerase A [Francisella novicida FTG]
gi|332678491|gb|AEE87620.1| Ribose 5-phosphate isomerase A [Francisella cf. novicida Fx1]
Length = 224
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++K+ AA A + + +TLG+GTGST + L + + + V S +T
Sbjct: 8 NQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVN-YRDKIKTVVSSSEDSTRKL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +DL IDG DE ++ LIKG G AL REKI AA +FI I DE
Sbjct: 67 KAL-GFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LPIE+ + + ++ E+ ++D GN I+
Sbjct: 126 SKKVNTLGNFPLPIEVIPMARSYVARQIVKLGGQPVYREQT----------ITDNGNVIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
D + I +P + EL I GV+ +G+F + D I+ T D +VL
Sbjct: 176 DVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMATKDSNIVVL 224
>gi|323453613|gb|EGB09484.1| hypothetical protein AURANDRAFT_58899 [Aureococcus anophagefferens]
Length = 242
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 127/236 (53%), Gaps = 12/236 (5%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRN 57
M ++K+ +AI YV GM +G+GTGSTA + L + +G + +P+S
Sbjct: 1 MSQDELKKQVGYQAIDDYVTSGMKVGLGTGSTAAFAVERLGALLKSGELTDIIAVPTSVR 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
T+ + IPL + ++ S +D++IDG DE+D L L+KG GGALLREK++ A +FIV
Sbjct: 61 TKEQAEELGIPLTTLDEFSRLDVAIDGADEVDPDLNLVKGGGGALLREKMVEIVADKFIV 120
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFG-LNEELRLR------RNGS 169
I DESK D +P+EI F T+ + ++ + G LRL ++G
Sbjct: 121 IVDESKLCDALGPGFPIPVEITPFCHEHTIRVIADLPALKGKCTPVLRLGSSTNNAKDGD 180
Query: 170 GLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
V+D GNYIVD F + D + +L GV++HG+FI M II SDG
Sbjct: 181 EPAVTDNGNYIVDLEFADPLADAPAAAAQLKATCGVVDHGIFIGMTTACIIAGSDG 236
>gi|218438007|ref|YP_002376336.1| ribose-5-phosphate isomerase A [Cyanothece sp. PCC 7424]
gi|226734906|sp|B7KIR2|RPIA_CYAP7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|218170735|gb|ACK69468.1| ribose 5-phosphate isomerase [Cyanothece sp. PCC 7424]
Length = 237
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 122/229 (53%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A Q V +G+GTGST + + ++I G V +P+S E +
Sbjct: 11 MKQEVGKAAAQRVHSDTIIGLGTGSTTAYAIQYIGERIQTGELKNVVGVPTSFGAEVLAR 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ +PL + + + +DL+IDG DE+D + LIKG G A REKI+ A FIV+ D K
Sbjct: 71 KYGVPLTTLDVIDKMDLAIDGADEVDPQKNLIKGGGAAHTREKIVDSLADVFIVVVDSGK 130
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ V + AL++ G +LR+ +G V+D GN ++D
Sbjct: 131 LVDKLGSTFLLPVEVIPMAVTPVIKALEK----LGGKTDLRMGVKKAGPVVTDQGNLVID 186
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + + NIPGV+E+GLF+ + D ++G DG+ V +
Sbjct: 187 VKFDNIEDPANLEKTINNIPGVLENGLFVGVADLILVGEIIDGKPRVRE 235
>gi|327470939|gb|EGF16395.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK330]
Length = 225
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLKITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFRQKDDQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|15223936|ref|NP_177266.1| RSW10 (RADIAL SWELLING 10); ribose-5-phosphate isomerase
[Arabidopsis thaliana]
gi|12323421|gb|AAG51684.1|AC016972_3 putative ribose 5-phosphate isomerase; 39482-40285 [Arabidopsis
thaliana]
gi|23297110|gb|AAN13095.1| putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
gi|332197040|gb|AEE35161.1| ribose 5-phosphate isomerase A [Arabidopsis thaliana]
Length = 267
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 132/239 (55%), Gaps = 10/239 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A+++V GM +G+GTGSTAK + +++ + G + IP+S T
Sbjct: 28 TQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTTH 87
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + VDLSIDG DE+D L L+KG GG+LLREK+I A+ +F+VI
Sbjct: 88 EQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKFVVIV 147
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG----LFV 173
DESK V ++G +P+E+ F + T L+E+ G +LR++ +G V
Sbjct: 148 DESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEAAPAV 207
Query: 174 SDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D NY+VD + I D ++ S + PGV+EHG+F+ M I+ G V +
Sbjct: 208 TDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFG-VTVKDR 265
>gi|187928169|ref|YP_001898656.1| ribose-5-phosphate isomerase A [Ralstonia pickettii 12J]
gi|238691802|sp|B2U9W6|RPIA_RALPJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|187725059|gb|ACD26224.1| ribose 5-phosphate isomerase [Ralstonia pickettii 12J]
Length = 228
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID+ +IKG GGAL REKI+A AS F+
Sbjct: 59 ASTRRLQGHGFTVLDLNEVDAIPVYVDGADEIDASGAMIKGGGGALTREKIVASVASVFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V+ +G LP+E+ + G LR+ + G ++ +D
Sbjct: 119 CIADGSKLVETMGAFPLPVEVVPMARAAVARQ----LAALGGQPRLRMTKEG-QIYKTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I DP+ + + IPGV+ GLF + ++GT G
Sbjct: 174 GNVIIDVVGLRIADPKGLESVVNEIPGVVTVGLFAKRGANVLLLGTEAGV 223
>gi|313890099|ref|ZP_07823734.1| ribose 5-phosphate isomerase A [Streptococcus pseudoporcinus SPIN
20026]
gi|313121460|gb|EFR44564.1| ribose 5-phosphate isomerase A [Streptococcus pseudoporcinus SPIN
20026]
Length = 227
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 119/228 (52%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A A QYV DGMT+G+GTGSTA F+ + ++ G ++ + +S T
Sbjct: 2 EALKKIAGVTAAQYVKDGMTVGLGTGSTAYYFVEEVGRRVKEEGLQIVGVTTSSRTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +++ +DL++DG DE+D IKG G ALL EKI+A +I + DES
Sbjct: 62 QELGIPLKSVDEIDVIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKDYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG +P+E+ Q+G + ++ C R V+D NYI+D
Sbjct: 122 KMVENLGAFKVPVEVVQYGSERLCRVFEKAGYC------PSFRMKDGQKLVTDMQNYIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+ +P + L GV+EHGLF MV+ I+ +G VL+
Sbjct: 176 LDMKCLKNPVAFAEILDATVGVVEHGLFNGMVNKVIVAGKEG-VQVLE 222
>gi|324994535|gb|EGC26448.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK678]
Length = 225
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLKITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+DS IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVSTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFRQKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
G I +P + EL ++ GV+EHGLF MVD II G ++
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIIAGKSGLKIL 221
>gi|23100154|ref|NP_693620.1| ribose 5-phosphate isomerase [Oceanobacillus iheyensis HTE831]
gi|41017734|sp|Q8EMZ1|RPIA2_OCEIH RecName: Full=Ribose-5-phosphate isomerase A 2; AltName:
Full=Phosphoriboisomerase A 2; Short=PRI 2
gi|22778386|dbj|BAC14655.1| ribose 5-phosphate isomerase [Oceanobacillus iheyensis HTE831]
Length = 224
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 132/226 (58%), Gaps = 8/226 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIH 65
K+ AA+ A++Y+ DGM +G+G+GST EF+ LA ++ +V IP+S+ +E
Sbjct: 6 KQIAAQEAVRYIKDGMVIGIGSGSTVNEFLYCLAARMRKERLQVVGIPASKKSERLATEL 65
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + +VD++IDG DEID +L L+KG GG+L+REK+I A FIVI K++
Sbjct: 66 GIPLTTFATYQNVDIAIDGTDEIDDQLYLVKGGGGSLVREKMIDLVAETFIVIASGKKKI 125
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG +P+E+ FG T L++ + LR +FVSD NYI+D F
Sbjct: 126 KKLGSFPVPVEVVPFGWQATEQRLQQFGC------QTNLRMVEEDIFVSDNQNYIIDCDF 179
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I D + + L I GVIE G+FINMVD AI+ +GE +L+K
Sbjct: 180 KEIDDAEALHRSLKQIVGVIETGIFINMVDKAIVA-DNGELSILEK 224
>gi|88601870|ref|YP_502048.1| ribose 5-phosphate isomerase [Methanospirillum hungatei JF-1]
gi|88187332|gb|ABD40329.1| ribose-5-phosphate isomerase [Methanospirillum hungatei JF-1]
Length = 235
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 116/229 (50%), Gaps = 8/229 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENF 61
Q K+ A +A Y+ +GMT+G+GTGST M L +++ G + IP+S T
Sbjct: 9 QEQAKKRAGYKAADYITNGMTVGLGTGSTVAFTMARLKERMTEEGLLIVGIPTSIQTTMR 68
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
IPL E +D+++DG D+ID +RLIKG G A +RE+I+A A++R I++ D
Sbjct: 69 AGALGIPLIGLEQAEKIDITVDGADQIDPEMRLIKGRGAAHVRERIVADASTRLIIVADP 128
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK L G +PIEI F + + L E G +R G +SD GN I+
Sbjct: 129 SKICSHL-TGPIPIEIIPFSFSHVIRRLNE----MGGMVTVREGVKKDGPVISDNGNIIL 183
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMV--DCAIIGTSDGECLV 228
D IPDP + + IPGV+ G+F IIG G ++
Sbjct: 184 DYTPVSIPDPSALETAINMIPGVVSCGIFAEFTSKTTVIIGEESGPRII 232
>gi|198436304|ref|XP_002127897.1| PREDICTED: similar to ribose 5-phosphate isomerase A (ribose
5-phosphate epimerase) [Ciona intestinalis]
Length = 263
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 8/231 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
KR AA A +V +G +G+G+GST + + +A+++ A +V +P+S
Sbjct: 27 VENAKRVAAFTAANNFVQNGYVIGVGSGSTIEYAVERIAERVEAENLKVTCVPTSFQARE 86
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + S +D++IDG DE+D + LIKG GG L +EKI+A AA +F+VI D
Sbjct: 87 LILKYKLSLSDLDRHSKLDVAIDGADEVDEQFTLIKGGGGCLTQEKIVAAAAKKFVVIAD 146
Query: 121 ESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K+ + +PIE+ + + + +KE +G +RL ++ +G ++D G
Sbjct: 147 FRKKSTNLGENWKKGIPIEVVPMAILQIQNKIKE---KYGGICTIRLAKSKAGPVITDNG 203
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
IVD F + + + IPGV+E G+F NM D I GT +G+ +
Sbjct: 204 MMIVDWQFDKSHNWSEVHQFIKLIPGVVETGIFFNMADIVIYGTENGQSDI 254
>gi|223974669|gb|ACN31522.1| unknown [Zea mays]
Length = 263
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 94/248 (37%), Positives = 128/248 (51%), Gaps = 19/248 (7%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA+++V GMTLG+GTGSTA + L D + G V +P+S TE
Sbjct: 15 TQEELKRVAAHRAVEFVEPGMTLGLGTGSTAAHALDRLGDLLRAGALPGVAGVPTSLKTE 74
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + + LSIDG DE+D L L+KG GG+LLREK+I A +RF+VI
Sbjct: 75 AHAARAGIPLLPL-PGARIALSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGARFVVIV 133
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLN----EELRLRRNGSG---- 170
DESK V G +P+E+ FG TL ++ + + G
Sbjct: 134 DESKLVPRLGCTGAIPVEVIPFGALHTLGLIRGLFDGLPGFHARLRTVPAAPAKGGEDSD 193
Query: 171 -----LFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
FV+D GNYIV+ FF G D + IS L I GV+EHG+F+ M I+ D
Sbjct: 194 SESEQPFVTDNGNYIVEMFFEDGIRGDLRDISDRLLRITGVVEHGMFLGMATTVIVANKD 253
Query: 224 GECLVLQK 231
G V+ +
Sbjct: 254 GTVSVMDR 261
>gi|108803577|ref|YP_643514.1| ribose-5-phosphate isomerase A [Rubrobacter xylanophilus DSM 9941]
gi|108764820|gb|ABG03702.1| ribose-5-phosphate isomerase [Rubrobacter xylanophilus DSM 9941]
Length = 231
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 134/231 (58%), Gaps = 12/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTEN 60
++KR AAR A+ YV GM +G+GTG+TA + + +++ G V+ +P+S T
Sbjct: 7 ERLKRAAAREAVDRYVESGMVVGLGTGTTASWAVRRIGERLLEGSLSGVRGVPTSEYTAA 66
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR-FIVIG 119
+ +PL S + +L+IDG DEI L +IKG GGALLREKI+A A+ R +++
Sbjct: 67 LARECGVPLVSLSE-RRPELTIDGADEIAPDLSVIKGRGGALLREKIVAAASRRGVVIVA 125
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK+V LG G LP+E++ FG T AL + E LRR + FV+DGG+Y
Sbjct: 126 DGSKQVSLLGNGPLPVEVEPFGWEATAEALAALGC------EPELRRVKTQPFVTDGGHY 179
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+D F IPDP ++ ++ +PG +E GLF+ + A+I +G VL+
Sbjct: 180 TLDCRFPGIPDPPGLACKIKRVPGALECGLFVGLARAAVIARPEG-VEVLE 229
>gi|159025878|emb|CAO86201.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 236
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCK 63
MK+ + A V +G+GTGST + L ++ +G + +P+S + +
Sbjct: 10 MKQEVGKAAANLVQSNSVVGLGTGSTTAYAIEYLGARLQSGEISNIVGVPTSFQAQVLAR 69
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ IPL + + + +D++IDG DE+D + LIKG G A +EKI+ A F+V+ D +K
Sbjct: 70 KYGIPLTTLDVIVKMDIAIDGADEVDPQKNLIKGGGAAHTQEKIVDSLADIFVVVVDGNK 129
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD +LP+E+ + + G LR+ +G V+D GN ++D
Sbjct: 130 LVDKLGSTFLLPVEVLPMAMTPVMLK----LEALGGKPSLRMGVKKAGPVVTDQGNLVID 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
F I DP + + N+PGV+E+GLF+ + D ++G DG+ +V +
Sbjct: 186 VKFDSIDDPADLERTINNMPGVLENGLFVGVADLILVGEIIDGKPVVRE 234
>gi|324992825|gb|EGC24745.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK405]
gi|327489812|gb|EGF21602.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK1058]
Length = 225
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 124/226 (54%), Gaps = 7/226 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLKITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+D+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDAAFNGIKGGGGALLMEKVVAVSTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFRQKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
G I +P + EL ++ GV+EHGLF MVD II G ++
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIIAGKSGLKIL 221
>gi|332184278|gb|AEE26532.1| Ribose 5-phosphate isomerase A [Francisella cf. novicida 3523]
Length = 224
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++K+ AA A + + +TLG+GTGST + L + + + V S +T
Sbjct: 8 NQNELKKLAAIEAAKSITTEITLGVGTGSTVAFLIEELVN-YRDKIKTVVSSSEDSTRKL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +DL IDG DE ++ LIKG G AL REKI AA +FI I DE
Sbjct: 67 KAL-GFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LPIE+ + + ++ E+ ++D GN I+
Sbjct: 126 SKKVNTLGNFPLPIEVIPMARSYVARQIVKLGGQPVYREQT----------ITDNGNVIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
D + I +P + EL I GV+ +G+F + D I+ T D +VL
Sbjct: 176 DVYNLKIDNPIKMETELNQITGVVTNGIFALKPADTVIMATKDSNIVVL 224
>gi|330718096|ref|ZP_08312696.1| ribose 5-phosphate isomerase A [Leuconostoc fallax KCTC 3537]
Length = 226
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
M K A +RA Q+V + M +G+G+GST + L ++A ++ +P+S T
Sbjct: 1 MSQDTQKAIAGKRAAQFVENDMIVGIGSGSTIAHVITELGRRVAEENLKIVGVPTSERTR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+++ +DV +DL+IDG D+ID IKG G ALL EKI+A + R I +
Sbjct: 61 RTAAKLGIPMYNVDDVDQIDLTIDGADQIDDSFAAIKGGGAALLWEKIVAVNSKRNIWVI 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DESKRV+ L + LP+E+ +G ++ L+ GL RL +NG +D N+
Sbjct: 121 DESKRVEKLTQ-YLPVEVIPYGSDQLFRRLEND----GLQPTWRLDQNG-NPVRTDSANF 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++D I PQ +S L + GV+E GLF+N+V+ +IGT ++
Sbjct: 175 LIDLHLPAIESPQDLSHLLSEMVGVVEDGLFLNIVNQVVIGTDTDSKII 223
>gi|307352929|ref|YP_003893980.1| ribose 5-phosphate isomerase [Methanoplanus petrolearius DSM 11571]
gi|307156162|gb|ADN35542.1| ribose 5-phosphate isomerase [Methanoplanus petrolearius DSM 11571]
Length = 228
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
D K+NA A + + DGM +G+GTGST M L+++I+ G + +P+S
Sbjct: 4 DIDISKKNAGYFAAELIQDGMAVGLGTGSTVFYAMERLSERISSEGLDMIGVPTSFQASM 63
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + IPL ++ S+D++IDG D+IDS LR+IKG G A E+ +A AA F+V+ D
Sbjct: 64 RAREYGIPLSVIDEYPSLDIAIDGADKIDSSLRMIKGRGAAQTLERCVADAADLFVVVAD 123
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK + L G +P+E+ F + ++E G +RL G ++D GN+
Sbjct: 124 ESKMCEKLH-GPVPVEVLPFALGLFERRIRE----LGGIPSIRLGVKKDGPVITDSGNFE 178
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVD--CAIIGTSDGE 225
VD FGFI +P+++ + N+PGV+ GLF D +IG +G
Sbjct: 179 VDCDFGFIDEPELLQSAINNMPGVLSCGLFTEFTDRTKVVIGNENGV 225
>gi|295698343|ref|YP_003602998.1| ribose 5-phosphate isomerase A [Candidatus Riesia pediculicola
USDA]
gi|291156965|gb|ADD79410.1| ribose 5-phosphate isomerase A [Candidatus Riesia pediculicola
USDA]
Length = 222
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M K+ A A++Y+ M +G+GTGST F+ L + SS ++ N
Sbjct: 1 MTWNDFKKMAGMAALEYIEKDMVIGVGTGSTVSYFIDGLKR--KKNIIRGAVSSSTSSTN 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + + DV VD+ +DG DE ++ L +IKG G AL REK+IA A +FI I D
Sbjct: 59 KLKEIGVSIIDSNDVDYVDIYVDGVDEFNNNLMMIKGGGAALTREKVIAAMAKKFIAIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+V LG+ LP+E+ + + LK+ G + R ++D GN I
Sbjct: 119 ESKKVTILGKSSLPVEVIPMAKSYVIRELKK----LGGIPKHR------KHVITDNGNII 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
VD + I +P + ++ +I GVI GLF N D ++ T G
Sbjct: 169 VDVYRLKIFNPTHLEDQINSIAGVITVGLFANRPADIVLLATHQGIKR 216
>gi|15805871|ref|NP_294569.1| ribose 5-phosphate isomerase [Deinococcus radiodurans R1]
gi|41017810|sp|Q9RW24|RPIA_DEIRA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|6458564|gb|AAF10424.1|AE001939_1 ribose 5-phosphate isomerase [Deinococcus radiodurans R1]
Length = 226
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 119/231 (51%), Gaps = 10/231 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNT 58
MD +K+ AA R++ V G +G+GTGSTAK + L K+A G + + +S +
Sbjct: 1 MDLEALKKEAALRSVALVQSGQRVGLGTGSTAKYAIEELGRKLAAGELSGIVGVSTSEAS 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
E + IP + +D++IDG DEI L L+KG GGAL+REK+ A R I+I
Sbjct: 61 EKLAREVGIPTEPLDPRP-LDIAIDGADEIAPNLDLVKGLGGALVREKMTEVQAKRLIII 119
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D +K V + LPIEI FG T+ L+E RLR+ G+ +V+D G
Sbjct: 120 ADHTKLVTRLGEKAPLPIEIVPFGFLSTIERLREFL------PGGRLRQPGAQPYVTDNG 173
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
NYI DA D + + + GV++ GLF+ M + A + DG +
Sbjct: 174 NYIFDAQLPAEFDARELERRIKGTLGVVDTGLFLGMAERAFVAAPDGVQEL 224
>gi|115314597|ref|YP_763320.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica OSU18]
gi|167009826|ref|ZP_02274757.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica FSC200]
gi|115129496|gb|ABI82683.1| ribose-5-phosphate isomerase [Francisella tularensis subsp.
holarctica OSU18]
Length = 241
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++K+ AA A + + +TLG+GTGST + L + + + V S +T
Sbjct: 25 NQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVN-YRDKIKTVVSSSEDSTRKL 83
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +DL IDG DE ++ LIKG G AL REKI AA +FI I DE
Sbjct: 84 KAL-GFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDE 142
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LPIE+ + + ++ E+ ++D GN I+
Sbjct: 143 SKKVNTLGNFPLPIEVIPMARSYIARQIVKLGGQPVYREQT----------ITDNGNVIL 192
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
D + I +P + EL I GV+ +G+F + D I+ T D +VL
Sbjct: 193 DVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMATKDSNIVVL 241
>gi|325687542|gb|EGD29563.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK72]
Length = 225
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFREKDDQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|190683032|gb|ACE81812.1| ribulose 5-phosphate isomerase [Oxyrrhis marina]
Length = 261
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 127/239 (53%), Gaps = 15/239 (6%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
D +K+ RA+ +V GM +G+GTGSTAK + +A+K+ +G V IP+S T
Sbjct: 17 DLEALKKQTGYRAVDDFVKSGMIVGLGTGSTAKYAVDRVAEKLKSGELKDVVGIPTSERT 76
Query: 59 ENFCKIHHIPLHSPEDV-SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + +PL + D+ S VD++IDG D +D L+KG GGA LREK++ A +F+V
Sbjct: 77 KQQAEELGVPLTTLNDITSQVDVAIDGADAVDPGFNLVKGGGGAHLREKLVEAFAKQFVV 136
Query: 118 IGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKE--VASCFGLNEELRLRRNGSG---- 170
I D++K + LP+EI FG + + + G +LR +G
Sbjct: 137 IVDQTKVQEGLGPSFPLPVEIVPFGSEHIMRQVAQLPAFKDTGCRAQLRKGSASTGSKED 196
Query: 171 ---LFVSDGGNYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
+ V+D GNYIVD FF IPDP + +L + GV+EHGLF M ++ DG
Sbjct: 197 GPDVAVTDNGNYIVDLFFEKYIPDPGAAAQQLQGVVGVVEHGLFCGMATDVLVAYPDGV 255
>gi|226493476|ref|NP_001150659.1| ribose-5-phosphate isomerase [Zea mays]
gi|195640906|gb|ACG39921.1| ribose-5-phosphate isomerase [Zea mays]
Length = 263
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 94/248 (37%), Positives = 128/248 (51%), Gaps = 19/248 (7%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++KR AA RA+++V GMTLG+GTGSTA + L D + G V +P+S TE
Sbjct: 15 TQEELKRVAAHRAVEFVEPGMTLGLGTGSTAAHALDRLGDXLRAGALPGVAGVPTSLKTE 74
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + + LSIDG DE+D L L+KG GG+LLREK+I A +RF+VI
Sbjct: 75 AHAARAGIPLLPL-PGARIALSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGARFVVIV 133
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLN----EELRLRRNGSG---- 170
DESK V G +P+E+ FG TL ++ + + G
Sbjct: 134 DESKLVPRLGCTGAIPVEVIPFGALHTLGLIRGLFDGLPGFHARLRTVPAAPAKGGEDSD 193
Query: 171 -----LFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
FV+D GNYIV+ FF G D + IS L I GV+EHG+F+ M I+ D
Sbjct: 194 SESEQPFVTDNGNYIVEMFFEDGIRGDLRDISDRLLRITGVVEHGMFLGMATTVIVANKD 253
Query: 224 GECLVLQK 231
G V+ +
Sbjct: 254 GTVSVMDR 261
>gi|91775315|ref|YP_545071.1| ribose 5-phosphate isomerase [Methylobacillus flagellatus KT]
gi|91775459|ref|YP_545215.1| ribose-5-phosphate isomerase [Methylobacillus flagellatus KT]
gi|91709302|gb|ABE49230.1| ribose 5-phosphate isomerase [Methylobacillus flagellatus KT]
gi|91709446|gb|ABE49374.1| ribose-5-phosphate isomerase [Methylobacillus flagellatus KT]
gi|167042446|gb|ABZ07172.1| putative Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
[uncultured marine microorganism HF4000_ANIW133B20]
Length = 230
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 7/230 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ K+ A +A Q+V DGM +G+GTGSTA F+ LA + G + SS +
Sbjct: 1 MNDKQLVAIQAAQHVQDGMVVGLGTGSTANYFIEELARRHRDEGLHITAAASSVASTIQA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ H +PL + E + +DL +DG DE+ + L L+KG G L+REK++A A+ RFIV+ D+S
Sbjct: 61 QTHGLPLVALEHLGRLDLYVDGADEVTTNLALLKGRGYDLVREKLLARASERFIVLVDKS 120
Query: 123 KRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V + +P+E+ F + G+ LR G ++ G+ ++
Sbjct: 121 KLVGHLGEKFPIPLEVIPFAWQLV----QASLQQLGIASSLRQNAAKDGWAITSHGSLVL 176
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ ++ L +IPG++EHG+F + D + +G+ + K
Sbjct: 177 ELTLPKTFKSDELNRLLNDIPGIVEHGVFDELADAVFVA-DNGQVEEIWK 225
>gi|299470524|emb|CBN78515.1| Ribose-5-phosphate isomerase [Ectocarpus siliculosus]
Length = 234
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
++K+ +++ YV GM +G+GTGSTA + L + + +G + IP+S T
Sbjct: 3 SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRT 62
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + IPL + + S +D++IDG DE+D L L+KG GGALLREK++ A +FIVI
Sbjct: 63 KEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVI 122
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D+SK V G +P+E+ F TL+ +K + S G + + LR +V+D
Sbjct: 123 VDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAK--LREEDGKPYVTDND 180
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD +F I D E+ GV+EHGLF++M I +DG V K
Sbjct: 181 NYIVDLYFTDPIKDANQAGKEMLETVGVVEHGLFLDMSFAVISAGTDG-ITVKTK 234
>gi|45358752|ref|NP_988309.1| ribose-5-phosphate isomerase A [Methanococcus maripaludis S2]
gi|67461426|sp|Q6LY04|RPIA_METMP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|45047618|emb|CAF30745.1| Ribose 5-phosphate isomerase [Methanococcus maripaludis S2]
Length = 239
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 10/233 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-IANGFRVQVIPSSRNTEN 60
D+ +K A++A + V D M +G+G+GSTA F+ L + + + +P+S ++
Sbjct: 14 DSDSLKLKVAKQAAKLVKDEMVVGLGSGSTANLFIQELGKRVVEEELYIYGVPTSFDSRM 73
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL S + +D++IDG DE+ L LIKG GG EKI+ + A F+V+
Sbjct: 74 MASNSGIPLISLDQCGEIDIAIDGADEVCKKTLSLIKGGGGCHTMEKIVDYHAKEFVVLA 133
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DE K V+ + +P+E+ F + L+ +R G ++D GN
Sbjct: 134 DEGKLVESLGDKTAVPLEVIPFAYSTVLNK----LLDMNTAPAIRSGSGKMGPVITDNGN 189
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D F I D + L NIPGV+E+G+F + D ++GTS + +L+K
Sbjct: 190 MIIDV-FINIEDAEETETMLNNIPGVLENGIF-SKCDKVLVGTSK-KVEILKK 239
>gi|302755722|ref|XP_002961285.1| hypothetical protein SELMODRAFT_74055 [Selaginella moellendorffii]
gi|300172224|gb|EFJ38824.1| hypothetical protein SELMODRAFT_74055 [Selaginella moellendorffii]
Length = 235
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 128/229 (55%), Gaps = 12/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K AA +AI+YV GM LG+GTGSTA + L + + +G + +P+S+ T
Sbjct: 9 TQDELKAMAADKAIEYVESGMVLGLGTGSTAAFVVAKLGELMKSGKLKNIVGVPTSKRTA 68
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL +D +DL+IDG DE+D L L+KG GGALLREK++ A+S+F+V+
Sbjct: 69 EQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASSKFVVV- 127
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
VD LG +P+E+ QF LK + G E +LR +G +V+D
Sbjct: 128 ----LVDGLGGSGLAMPVEVVQFCWKYNAERLKTLPEVAGC--EAKLRLDGDKPYVTDNS 181
Query: 178 NYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
NYIVD +F I D + + + ++ GV++HGLF++M II + G
Sbjct: 182 NYIVDLYFKTPIKDARAAAKAISSLEGVVDHGLFLDMATAVIIAGTSGV 230
>gi|150401166|ref|YP_001324932.1| ribose 5-phosphate isomerase [Methanococcus aeolicus Nankai-3]
gi|166200049|sp|A6UUZ8|RPIA_META3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150013869|gb|ABR56320.1| ribose 5-phosphate isomerase [Methanococcus aeolicus Nankai-3]
Length = 234
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 128/226 (56%), Gaps = 10/226 (4%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIHHI 67
NA A++++ DGM +G+G+G+TA F+ L KI G V +P+S + + I
Sbjct: 16 NAVNEALKFIKDGMIVGLGSGTTANLFIAELGKKISEEGLNVFGVPTSFESRMMAIQYGI 75
Query: 68 PLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
PL S ++ +D+++DG DE++ +IKG GG +EKII + A I+I DESK VD
Sbjct: 76 PLVSLDEYGELDIAVDGADEVNKETLNVIKGGGGCHTQEKIIDYCAKELIIIVDESKLVD 135
Query: 127 FLGRGML-PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG P+E+ F + L+ L ++ S +R+ G ++D GN I+D F
Sbjct: 136 SLGENTPVPLEVLPFAYSSVLNELLKMNSA----PSIRMADKKMGPVITDNGNMIIDV-F 190
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ +P+ + +L NIPGV+E+G+F VD I+G SD + +L+K
Sbjct: 191 IDLNNPEEVEKQLNNIPGVVENGIFT-KVDKVIVGKSD-KAEILKK 234
>gi|241895106|ref|ZP_04782402.1| ribose-5-phosphate isomerase A [Weissella paramesenteroides ATCC
33313]
gi|241871824|gb|EER75575.1| ribose-5-phosphate isomerase A [Weissella paramesenteroides ATCC
33313]
Length = 225
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 128/223 (57%), Gaps = 6/223 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
M+ K++AA+ A+ Y+ +GM +G+GTGSTA F+ L+ KI + + + +S +
Sbjct: 1 MNINLQKKSAAQAAVNYIDEGMIVGLGTGSTANYFIEALSKKIKAANWHLTCVTTSTKSR 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + S +DV+ +D+++DG DE D +L IKG G ALL EKI+A ++++ I I
Sbjct: 61 QLAESLGIHVVSIDDVNHIDVTVDGVDEFDPQLNGIKGGGVALLFEKIVALSSNKNIWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK+ D LG +LP+EI FG + + L + L + R+ N + ++D NY
Sbjct: 121 DTSKKSDKLGSFLLPVEIIPFGSVQLFTKLSQ----MNLKPQFRV-DNQNQKVLTDSKNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
I+D + D ++ L ++ G++EHGLF+++ IIG
Sbjct: 176 IIDVDISHVSDIHKLADTLKSLTGIVEHGLFLDLCHTVIIGGE 218
>gi|56708271|ref|YP_170167.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89256123|ref|YP_513485.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica LVS]
gi|110670742|ref|YP_667299.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
tularensis FSC198]
gi|134302188|ref|YP_001122157.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
tularensis WY96-3418]
gi|156502144|ref|YP_001428209.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|187931539|ref|YP_001891523.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224457391|ref|ZP_03665864.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254367448|ref|ZP_04983474.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica 257]
gi|254369128|ref|ZP_04985140.1| hypothetical protein FTAG_00061 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370754|ref|ZP_04986759.1| ribose 5-phospate isomerase A [Francisella tularensis subsp.
tularensis FSC033]
gi|254875091|ref|ZP_05247801.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
tularensis MA00-2987]
gi|290953261|ref|ZP_06557882.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica URFT1]
gi|295313503|ref|ZP_06804098.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica URFT1]
gi|67461297|sp|Q5NFM5|RPIA_FRATT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|122500922|sp|Q2A467|RPIA_FRATH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|122970907|sp|Q14H27|RPIA_FRAT1 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200041|sp|A7NBA0|RPIA_FRATF RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200043|sp|A4IYN5|RPIA_FRATW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238691556|sp|B2SG83|RPIA_FRATM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|283135401|pdb|3KWM|A Chain A, Crystal Structure Of Ribose-5-Isomerase A
gi|283135402|pdb|3KWM|B Chain B, Crystal Structure Of Ribose-5-Isomerase A
gi|283135403|pdb|3KWM|C Chain C, Crystal Structure Of Ribose-5-Isomerase A
gi|283135404|pdb|3KWM|D Chain D, Crystal Structure Of Ribose-5-Isomerase A
gi|54113107|gb|AAV29187.1| NT02FT1282 [synthetic construct]
gi|56604763|emb|CAG45841.1| Ribose 5-phospate isomerase A [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89143954|emb|CAJ79175.1| Ribose 5-phospate isomerase A [Francisella tularensis subsp.
holarctica LVS]
gi|110321075|emb|CAL09224.1| Ribose 5-phospate isomerase A [Francisella tularensis subsp.
tularensis FSC198]
gi|134049965|gb|ABO47036.1| ribose 5-phosphate isomerase A [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134253264|gb|EBA52358.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
holarctica 257]
gi|151568997|gb|EDN34651.1| ribose 5-phospate isomerase A [Francisella tularensis subsp.
tularensis FSC033]
gi|156252747|gb|ABU61253.1| ribose 5-phosphate isomerase A [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157122078|gb|EDO66218.1| hypothetical protein FTAG_00061 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712448|gb|ACD30745.1| ribose 5-phosphate isomerase A [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254841090|gb|EET19526.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159498|gb|ADA78889.1| ribose-5-phosphate isomerase A [Francisella tularensis subsp.
tularensis NE061598]
Length = 224
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++K+ AA A + + +TLG+GTGST + L + + + V S +T
Sbjct: 8 NQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVN-YRDKIKTVVSSSEDSTRKL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +DL IDG DE ++ LIKG G AL REKI AA +FI I DE
Sbjct: 67 KAL-GFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LPIE+ + + ++ E+ ++D GN I+
Sbjct: 126 SKKVNTLGNFPLPIEVIPMARSYIARQIVKLGGQPVYREQT----------ITDNGNVIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
D + I +P + EL I GV+ +G+F + D I+ T D +VL
Sbjct: 176 DVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMATKDSNIVVL 224
>gi|86606952|ref|YP_475715.1| ribose-5-phosphate isomerase A [Synechococcus sp. JA-3-3Ab]
gi|123505388|sp|Q2JSC9|RPIA_SYNJA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|86555494|gb|ABD00452.1| ribose 5-phosphate isomerase A [Synechococcus sp. JA-3-3Ab]
Length = 230
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
A ++K+ AA+ A Q V GM +G+GTGSTA + LA ++ G + +P+S T
Sbjct: 3 SADELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGLQFIGVPTSERTAE 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + E+ +DL+IDG DEI+ L LIKG GGALLREK++ +A+ I+I
Sbjct: 63 QARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIA 122
Query: 120 DESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D SK+V R +P+E+ +FG TL+ ++ G LR R +++D +
Sbjct: 123 DASKKVAHLGTRFPVPVEVVRFGWKTTLARVE----ALGCQAVLR-RTAEGDPYLTDEQH 177
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
YI+D FG I +P ++ +L GV+EHGLFI M AII +G + Q
Sbjct: 178 YILDCQFGPIANPAKLAEQLKGTVGVVEHGLFIGMATEAIIAGPEGIETLRQ 229
>gi|313679966|ref|YP_004057705.1| ribose-5-phosphate isomerase [Oceanithermus profundus DSM 14977]
gi|313152681|gb|ADR36532.1| ribose-5-phosphate isomerase [Oceanithermus profundus DSM 14977]
Length = 227
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 134/233 (57%), Gaps = 9/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
MD +KR AA A+ YV GM LG+GTG+T + + + +A G V +P+SR T
Sbjct: 1 MDLEDLKRRAAEAAVGYVHSGMRLGLGTGTTTRWAVERIGALLAAGELADVVGVPTSRAT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
E + IP+ ++ VDL+IDG DEI L L+KG+GGALLREKI+ AA RFIVI
Sbjct: 61 EALMRRVGIPVVELDERG-VDLAIDGADEIAPDLTLVKGHGGALLREKIVEAAAGRFIVI 119
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D +KRV + +PIEI +FG +T+S ++ G +RL +SD G
Sbjct: 120 ADHTKRVHVIGEKKAVPIEIARFGWRRTVSLIE----ALGARCTVRL-DGNHEPALSDNG 174
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N +VDA FG + DP+ + +L +PGV E GLF+ + D AI+ DG+ L
Sbjct: 175 NLLVDAHFGPVGDPRGLEQQLLALPGVFEVGLFVGLADLAIVAGPDGKLEELS 227
>gi|71892037|ref|YP_277767.1| ribose-5-phosphate isomerase A [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|123641062|sp|Q493E8|RPIA_BLOPB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|71796143|gb|AAZ40894.1| ribose 5-phosphate isomerase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 218
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K++ A++YV +G+GTGST F+ L + I V S+ ++
Sbjct: 1 MVQNKLKKSVGWAALKYVQSSRIIGVGTGSTVTYFIEAL-NSIKEKIEGVVSSSNYSSNQ 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IPL + + +D+ +D DEIDS +++IKG GGAL +EKIIA AA +FI I D
Sbjct: 60 L-KKIGIPLCNLNSLHELDVYVDSADEIDSHMQMIKGKGGALTKEKIIAAAAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V+ LGRG LPIE+ + G E R ++D GN I
Sbjct: 119 SSKQVNILGRGPLPIEVIPMARSLVARE----LVRLGGLPEYRHN------VITDNGNNI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D + I + ++ ++ NIPGV+ G+F D +IGT +G ++
Sbjct: 169 LDVYNMKIVNASLLETKINNIPGVVSVGIFAKRRADIVLIGTREGIKII 217
>gi|332637559|ref|ZP_08416422.1| ribose-5-phosphate isomerase A [Weissella cibaria KACC 11862]
Length = 230
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 121/231 (52%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
MD L+ KR A + A + +GM +G+GTGST K F+ L ++ G + + +S T
Sbjct: 1 MDTLEQKRAAGKYAATLIENGMVVGLGTGSTVKFFVEELGRRVNEEGLDIVGVTTSTRTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I L +DV +D+++DG D +D++L IKG G ALL EK++A + R + I
Sbjct: 61 EQARTLGIALADVDDVDHIDITVDGADVVDAQLNGIKGGGAALLYEKVVAKNSRRNVWIV 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D SK + LG LP+E+ +G + GL+ LR R +D GN
Sbjct: 121 DASKVHEELGHFPLPVEVVTYGAEQLCRVFDN----HGLHPVLR-RTADGEPVKTDNGNE 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
IVD IP P ++ L N GVIEHGLF+N+ D I+G + VL+
Sbjct: 176 IVDLHLDTIPFPSELANWLANQVGVIEHGLFLNVADEVIVGGDE--IQVLK 224
>gi|307823740|ref|ZP_07653968.1| ribose 5-phosphate isomerase [Methylobacter tundripaludum SV96]
gi|307735034|gb|EFO05883.1| ribose 5-phosphate isomerase [Methylobacter tundripaludum SV96]
Length = 228
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+ K A+ A V DGM +G+GTGSTA F+ LA + G +V + SS +
Sbjct: 1 MNDKERIAQHAANQVADGMLVGLGTGSTANCFIEELAQRSREQGLKVTTVSSSIASAIKA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +P+ + VS VDL +DG DE+ L L+KG G L+REK++A A+ +F+V+ + +
Sbjct: 61 QQLGLPVLGFDQVSHVDLYVDGADEVSPELTLLKGQGADLVREKLLATASKQFLVLVESN 120
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V+ +PIE+ F K+ G +LR N +G +S G+ I+
Sbjct: 121 KLVERIGQHFAIPIEVMPFAWQLV----KKQLEAIGGQGDLRQNANKNGYAISSHGSLIL 176
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D F D + ++ L +IPG++EHG+F + +IG +G+ Q
Sbjct: 177 DMRFAEHIDAEALNDILNSIPGIVEHGIFYALATTVLIGV-NGQVQERQ 224
>gi|323351500|ref|ZP_08087154.1| ribose 5-phosphate isomerase [Streptococcus sanguinis VMC66]
gi|322121986|gb|EFX93712.1| ribose 5-phosphate isomerase [Streptococcus sanguinis VMC66]
gi|324991081|gb|EGC23015.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK353]
Length = 225
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLKITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + E+ R FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGYKPAFREKDGQR------FVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|299067283|emb|CBJ38480.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Ralstonia solanacearum CMR15]
Length = 244
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 115/230 (50%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ +A A + SS
Sbjct: 17 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFA--GAVSSSE 74
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID +IKG GGAL REKI+A A RF+
Sbjct: 75 ASTRRLQGHGFAVLDLNEVDAIPVYVDGADEIDDTGAMIKGGGGALTREKIVASVAGRFV 134
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK VD LG LP+E+ A+ + G LR+ + G ++ +D
Sbjct: 135 CIADGSKLVDVLGAFPLPVEVVPMARA----AVARRLAALGGQPRLRMAKEG-QIYQTDN 189
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I +P+ + ++ +IPGV+ GLF D ++GT G
Sbjct: 190 GNVILDVSGLRIGEPKTLEAQINDIPGVVTVGLFAKRGADVLLLGTEAGV 239
>gi|219851245|ref|YP_002465677.1| ribose 5-phosphate isomerase [Methanosphaerula palustris E1-9c]
gi|219545504|gb|ACL15954.1| ribose 5-phosphate isomerase [Methanosphaerula palustris E1-9c]
Length = 237
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 81/227 (35%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A RA V DGM +G+GTGST M LA +I G + IP+S T +
Sbjct: 11 KREAGYRAADMVADGMVVGLGTGSTVFFAMERLAARIREGLVITGIPTSFQTAIRARGCG 70
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IPL + D +DL+IDG D++D LIKG G A +EK +A AA +++ D SK
Sbjct: 71 IPLATLNDYPVIDLAIDGADQVDPGFALIKGRGAAQTQEKCVAFAAKSLVIVADPSKLTR 130
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
L ++PIE+ + G LR G ++D GN ++D FG
Sbjct: 131 KLDA-VVPIEVLSSAYVPVIR----YLKTIGGVPVLREGIKKDGPVITDNGNMVIDCGFG 185
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDC--AIIGTSDGECLVLQK 231
I DP + L +IPGV+ GLF D ++G S+G C VL +
Sbjct: 186 TIGDPTALDIHLSSIPGVVTCGLFTTFADKTTVVVGDSNG-CQVLSR 231
>gi|119775868|ref|YP_928608.1| ribose-5-phosphate isomerase A [Shewanella amazonensis SB2B]
gi|166229236|sp|A1S982|RPIA_SHEAM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|119768368|gb|ABM00939.1| ribose-5-phosphate isomerase [Shewanella amazonensis SB2B]
Length = 219
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +MK+ AA A++YV +G+GTGST F+ L I V S +T
Sbjct: 1 MTQDEMKKAAAWAALKYVEKDSIVGVGTGSTVNHFIDALG-TIKADIEGAVSSSEASTAK 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IP++ V + + +DG DEI+ ++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 LKAL-GIPVYDLNSVDRLSVYVDGADEINGQMDMIKGGGAALTREKIVAAVADKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K V LG LP+E+ + G + R V+D GN I
Sbjct: 119 NTKEVAILGEFPLPVEVIPMARSYVARE----LVKLGGDPVYREG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I +P+ + ++ I GV+ +GLF + D ++GT DG V
Sbjct: 169 LDVHNMKIMEPKKLEAQINGIVGVVTNGLFAHRGADVLLVGTPDGVKTV 217
>gi|171463423|ref|YP_001797536.1| ribose 5-phosphate isomerase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|238689057|sp|B1XU95|RPIA_POLNS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|171192961|gb|ACB43922.1| ribose 5-phosphate isomerase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 236
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 109/240 (45%), Gaps = 18/240 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD---GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M+ Q+K+ A V+ G LG+GTGSTA F+ LA + G + SS
Sbjct: 1 MNQDQLKQMVGEAARDEVLKLPAGQVLGVGTGSTANYFIDALA--LHKGHFAGTVSSSNA 58
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
T H + P DV + +DG DEID +IKG GG L EKIIA A +FI
Sbjct: 59 TTERLLKHGFKVLDPNDVQGLPAYVDGADEIDPAGHMIKGGGGVLTGEKIIASMAKQFIC 118
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN--------GS 169
I D SK+V LG LP+EI L++ FG LRL ++ S
Sbjct: 119 ICDSSKQVPVLGNFALPVEIIPLSQGVVSRELEK----FGGRVTLRLAKHTRADLNQTPS 174
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
FV+D G +I+D I P + ++ I GVI GLF + ++ + G +
Sbjct: 175 EPFVTDNGGWILDVAGLRIASPAQMEAQINQIAGVITVGLFAKEKANILLVSNAAGVERI 234
>gi|332991977|gb|AEF02032.1| ribose-5-phosphate isomerase A [Alteromonas sp. SN2]
Length = 218
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD K+ A+ AI+YV +G +G+GTGST F+ L KI N V S +T+
Sbjct: 1 MDQNAKKQAVAKAAIEYVENGSIVGVGTGSTVNFFIEELG-KIKNNIEGAVSSSDASTKL 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + DVS++ + IDG DE+ +IKG G AL REKI+A A++ F+ I D
Sbjct: 60 LEAL-GIEVFALNDVSNISVYIDGADEVTEHKHMIKGGGAALTREKIVAGASTTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SKRV LG+ LP+E+ + G + E R V+D GN I
Sbjct: 119 DSKRVPVLGKFPLPVEVIPMARSFVARE----LVKLGGDPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGE 225
+D I +P+ + + NIPGV+ +G+F + D + T G
Sbjct: 169 LDVHNLEILNPRELEQSINNIPGVVTNGIFALRGADIVLSATETGV 214
>gi|328874273|gb|EGG22639.1| ribose-5-phosphate isomerase [Dictyostelium fasciculatum]
Length = 236
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 119/231 (51%), Gaps = 10/231 (4%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ K+ A+ +A+ V GM +G+G+GST K + + + G + +P+S +
Sbjct: 9 EKAKKLASYKAVDDNVRAGMKVGIGSGSTIKYAVDRIKEL---GIPLTCVPTSFQSTQLI 65
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ L +D++IDG DE+D++L LIKG G L+EKI+A ++ + I++ D S
Sbjct: 66 IAAGLELSDLSRTPELDVTIDGADEVDAQLNLIKGGGACQLQEKIVAASSKKLIIVADFS 125
Query: 123 KRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
K + +PIE+ + L+ FGL LR+ N +G V+D N+
Sbjct: 126 KDSSQFGDNWKKGIPIEVVPMAYVPVMIKLER---SFGLKPVLRMAVNKAGPVVTDNANF 182
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++DA F I +P ++ ++ IPGV+E GLFINM + A G DG
Sbjct: 183 VIDAQFTSIDNPADLATKIKMIPGVVETGLFINMAEKAYFGQKDGTVKERS 233
>gi|327462130|gb|EGF08457.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK1]
Length = 225
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + G N R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERA----GYNPA--FRQKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|239995913|ref|ZP_04716437.1| ribose-5-phosphate isomerase A [Alteromonas macleodii ATCC 27126]
Length = 218
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD K+ A+ AI+YV +G+GTGST F+ L KI + V S +TE
Sbjct: 1 MDQNAKKQAVAKAAIEYVEADSIVGVGTGSTVNFFIEELG-KIKHKIEGAVSSSEASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + +VS++ + IDG DE+ +IKG G AL REKI+A AA+ F+ I D
Sbjct: 60 LKAL-GIEVFELNEVSNLSVYIDGADEVTEHKHMIKGGGAALTREKIVAGAATTFVCIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESKRV LG LP+E+ + G + E R V+D GN I
Sbjct: 119 ESKRVPVLGSFPLPVEVIPMARSFVARE----LVKLGGDPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+D I +P+ + ++ NIPGV+ +G+F + D + T G
Sbjct: 169 LDVHNLEILNPRELEQKINNIPGVVTNGIFALRGADIVLSATDSGVET 216
>gi|325694430|gb|EGD36339.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK150]
Length = 225
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+D+ IKG GGALL EK++A +I + D+S
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDAAFNGIKGGGGALLMEKVVAVPTKHYIWVVDDS 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + E+ R FV+D N+I+D
Sbjct: 122 KMVENLGAFKLPVEVVQYGAEQLFRRFERSGYKPAFREKDGQR------FVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|227877109|ref|ZP_03995187.1| ribose-5-phosphate isomerase [Lactobacillus crispatus JV-V01]
gi|227863282|gb|EEJ70723.1| ribose-5-phosphate isomerase [Lactobacillus crispatus JV-V01]
Length = 230
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V GM LG+GTGST F+ L + +G +++ ++ +S ++ + + D
Sbjct: 20 MVKSGMVLGVGTGSTVAFFIDALGKRKDEDGLKLKAIVTTSNRSKKQLEGLGFKVSELAD 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D + L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 80 IDQADLTVDGADRVADNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHRLSGFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ +T ++ + R R +G+ +V+ GNYI+D +P P +
Sbjct: 140 VEVLPISCEQTFKRFEQEGL------KPRWRMDGNQRYVTHYGNYIIDLAADPVPAPHGL 193
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG +K
Sbjct: 194 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKK 230
>gi|321474784|gb|EFX85748.1| hypothetical protein DAPPUDRAFT_313516 [Daphnia pulex]
Length = 235
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MD--ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSR 56
M+ KR AA +A+ +VVDG +G+G+GST + LA ++ G V +PSS
Sbjct: 1 MNDPVENAKRLAAFKAVDNHVVDG-VIGIGSGSTVVYAVERLAQRVKDEGLEVICVPSSF 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + + L E + ++IDG DE D+ L LIKG GG L +EKI+A A FI
Sbjct: 60 QAKQLIIQYGLKLGDLEMNPELKVTIDGADESDTMLTLIKGGGGCLTQEKILASCAEEFI 119
Query: 117 VIGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL-RRNGSGLF 172
VI D K R +PIE+ +++ G ELR+ + +G
Sbjct: 120 VIADYRKASTNLGEQWRKGIPIEVIPGAYRVVYQKIEK---LLGGKSELRMSGSSKAGPV 176
Query: 173 VSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
V+D GN+++D F + D + + L IPGV+E+GLF+ M A G SDG
Sbjct: 177 VTDNGNFLLDWNFEGVKDWKHVENCLNMIPGVVENGLFVGMARKAYFGMSDGTV 230
>gi|317407634|gb|EFV87574.1| ribose-5-phosphate isomerase A [Achromobacter xylosoxidans C54]
Length = 226
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 118/235 (50%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ AA A++ V + +G+GTGSTA F+ LA G + SS
Sbjct: 3 SQQELKQQAADAALELVEQVAGPDVIIGVGTGSTADLFIDGLARF--KGRIGGTVASSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H + + DV+S+ + +DG DEID+ L +IKG GGA REKI+A A RF+
Sbjct: 61 SAARLAGHGLKVLDLNDVTSMPIYVDGADEIDANLHMIKGGGGAQTREKIVASVADRFVC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V+ +G+ LPIE+ A+ + G LR FV+D G
Sbjct: 121 IVDESKLVEVMGKFPLPIEVIPMAREAVARAM----TAMGGQPRLREG------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
N I+D I D + + N+PGV+ GLF I D A++ T +G + ++
Sbjct: 171 NIILDVAGLSITDAPGLEARINNLPGVVTCGLFAIAGADVALLATQNGIRRLDRR 225
>gi|226939813|ref|YP_002794886.1| ribose-5-phosphate isomerase A [Laribacter hongkongensis HLHK9]
gi|254808714|sp|C1D560|RPIA_LARHH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226714739|gb|ACO73877.1| RpiA [Laribacter hongkongensis HLHK9]
Length = 220
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 107/217 (49%), Gaps = 13/217 (5%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
I YV +G +G+GTGSTA F+ LA +I + + SS+ T + K I +
Sbjct: 16 IDYVPEGAIIGVGTGSTANFFIDELA-RIKDRIE-GAVASSQATADRLKAIGIQVFDLNG 73
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
V + + +DG DEI+ L +IKG GGAL REKI+A ++ +FI I DESK V LG LP
Sbjct: 74 VGELPVYVDGCDEINHYLHMIKGGGGALTREKIVATSSRQFICIADESKLVKRLGAFPLP 133
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + G + E R FV+D GN I+D I P +
Sbjct: 134 VEVIPMARSLVARK----LVKLGGHPEWREN------FVTDNGNLILDVHDLAIDQPLEM 183
Query: 195 SGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQ 230
+ + GV+ GLF D ++G SDG ++
Sbjct: 184 EETINRMAGVVTCGLFARRRADVLLLGRSDGTVQTIE 220
>gi|325689630|gb|EGD31634.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK115]
Length = 225
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIQEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EELGIPLKSIDDVDQVDVTVDGADEVDSVFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + G N R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERA----GYNPA--FRQKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|27904857|ref|NP_777983.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|31076922|sp|Q89AD5|RPIA_BUCBP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|27904255|gb|AAO27088.1| ribose 5-phosphate isomerase A [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 218
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 124/229 (54%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++KR AR+ + Y+ G +G+GTGST F+ +L+ I N V S+ +T
Sbjct: 1 MKTNELKRLVARKVVDYINPGSVIGIGTGSTVSYFIEVLS-TIKNLISGAVSSSNFSTAC 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IP++ ++S+ L ID DEI+ +L++IKG G AL REKIIA A +FI I D
Sbjct: 60 L-KRIGIPIYDLSKINSLVLYIDSADEINPQLQMIKGGGAALTREKIIAATAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+V+ LG+ LPIEI + + + + G + R ++D GN I
Sbjct: 119 ESKQVEILGKVPLPIEIIPMARSYISNEIIK----IGGMPKYRKN------VITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D F I DP + ++ + PGV+ GLF D A+IGTS G ++
Sbjct: 169 IDVFNLVITDPVCLENKINSFPGVVSVGLFATRKADIALIGTSSGVQVI 217
>gi|150402362|ref|YP_001329656.1| ribose-5-phosphate isomerase A [Methanococcus maripaludis C7]
gi|166200054|sp|A6VGC9|RPIA_METM7 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|150033392|gb|ABR65505.1| ribose 5-phosphate isomerase [Methanococcus maripaludis C7]
Length = 239
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 120/233 (51%), Gaps = 10/233 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D+ +K A++A + V D M +G+G+GSTA F+ L +I + +P+S ++
Sbjct: 14 DSDSLKLKVAKQAAKLVKDEMVVGLGSGSTANLFIQELGKRIVEEELYIYGVPTSFDSRM 73
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL S + +DL+IDG DE+ S L LIKG GG EKI+ + A FIV+
Sbjct: 74 VASTAGIPLISLDQCGEIDLAIDGADEVCKSTLALIKGGGGCHTMEKIVDYYAKEFIVLA 133
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DE K VD + +P+E+ F + L+ +R G ++D GN
Sbjct: 134 DEGKLVDSLGDKTPVPLEVIPFAYSTVLNK----LLKLNTAPAIRSGSGKMGPVITDSGN 189
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D F I D + L NIPGV+E+G+F + D ++GTS + +L+K
Sbjct: 190 MIIDV-FMSIEDAEETEIMLNNIPGVLENGVF-SKCDKVLVGTSK-KVEILKK 239
>gi|170742886|ref|YP_001771541.1| ribose 5-phosphate isomerase [Methylobacterium sp. 4-46]
gi|168197160|gb|ACA19107.1| ribose 5-phosphate isomerase [Methylobacterium sp. 4-46]
Length = 235
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 20 DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
DGM LG+GTGSTA EF+ LL ++ G V +P+S T + IPL + ++ +D
Sbjct: 19 DGMRLGLGTGSTAAEFVELLGARVRAGLSVVGVPTSEATHRAAQAAGIPLTTLDETPELD 78
Query: 80 LSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQ 139
L+IDG DEID RLIKG GGALLREKI+A A+ R +VI D KRV+ LGR LP+E+
Sbjct: 79 LTIDGADEIDGARRLIKGGGGALLREKIVAAASRRMVVIADAGKRVETLGRFPLPVEVVP 138
Query: 140 FGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIVDAFFGFIPDPQIISGEL 198
FG+ T A++ G E+ LRR G FV+DG + I+DA G IPDP+ ++ L
Sbjct: 139 FGLAATRRAVEGALGRAGCAGEVALRRAADGAPFVTDGAHLILDAHLGRIPDPEALAAAL 198
Query: 199 CNIPGVIEHGLFINMVDCAIIGTSD-GECLVL 229
+PGV+EHGLF+ + AI+ + GE +L
Sbjct: 199 AAVPGVVEHGLFLGLCSGAILAADEAGEVRLL 230
>gi|21672670|ref|NP_660737.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25009132|sp|Q8K9E2|RPIA_BUCAP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|21623307|gb|AAM67948.1| ribose 5-phosphate isomerase a [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 219
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 13/231 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ ++K+ AA A+ Y+ G +G+GTGST F+ L+ + SS ++
Sbjct: 1 MNLNELKKKAAWAALDYIYPGTVIGVGTGSTVFYFIQALST--VKHLISGAVSSSNSSTV 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +++ +D DEI++ +++IKG G AL +EKIIA + +F+ I D
Sbjct: 59 LLKKNGIRVLDLNTFDFLEIYVDSADEINNDMQMIKGGGAALTKEKIIAAMSKKFVCIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+V+ LG LPIEI + + + G +LR ++D GN I
Sbjct: 119 ESKKVNILGTFPLPIEIIPIAFSYISKEILK----IGGQPKLREN------IITDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D + FI DP + ++ ++PGV+ GLF + D +IGT G ++
Sbjct: 169 IDVYNLFINDPISVEKKINSLPGVVSVGLFASRVADVVLIGTQKGVEIIKN 219
>gi|167570072|ref|ZP_02362946.1| ribose-5-phosphate isomerase A [Burkholderia oklahomensis C6786]
Length = 235
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A QYV+D +G+GTGSTA F+ LA + + +R V S
Sbjct: 5 MTQDELKRLVGEAAAQYVIDNVPERAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 63
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 64 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDGGGAMIKGGGGALTREKIVASVAETFV 122
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 123 CIADASKRVAVLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGT-PYVTDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PG++ GLF D ++GT G +
Sbjct: 178 GNEILDVKGLRIQDPRALEATINGWPGIVTVGLFAERGADLCLLGTEHGVETLR 231
>gi|167562885|ref|ZP_02355801.1| ribose-5-phosphate isomerase A [Burkholderia oklahomensis EO147]
Length = 231
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A QYV+D +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGEAAAQYVIDNVPERAVIGVGTGSTANCFIDALAA-VKDRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ S+ + +DG DEID +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIESLQVYVDGADEIDGGGAMIKGGGGALTREKIVASVAETFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG+ LP+E+ + G LR++++G+ +V+D
Sbjct: 119 CIADASKRVAVLGQFPLPVEVVPMARTAIGRR----LAALGGVPVLRVKQDGT-PYVTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + + PG++ GLF D ++GT G +
Sbjct: 174 GNEILDVKGLRIQDPRALEATINGWPGIVTVGLFAERGADLCLLGTEHGVETLR 227
>gi|217969946|ref|YP_002355180.1| ribose-5-phosphate isomerase A [Thauera sp. MZ1T]
gi|217507273|gb|ACK54284.1| ribose 5-phosphate isomerase [Thauera sp. MZ1T]
Length = 220
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 116/226 (51%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA A+ +VV+G +G+GTGST F+ LA + + R V S +T+
Sbjct: 1 MTQDELKKAAAYAALDHVVEGSIVGVGTGSTVNHFIDALAG-MRDRIRGAVSSSEASTQR 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H I + + + S+ + +DG DEID +IKG GGAL REKI+A + RF+ I D
Sbjct: 60 LRA-HGIEVFDLDGIESLPVYVDGADEIDGGFAMIKGGGGALTREKIVAAVSERFVCICD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V+ LGR LPIE+ + L+ L E RLR FV+D GN I
Sbjct: 119 ASKKVEVLGRFPLPIEVIPMARSHVARELRA------LGGEPRLREG----FVTDNGNLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGE 225
+D I DP I + I GV+ +GLF D ++ G
Sbjct: 169 LDVHGLSITDPVTIEMRINQIVGVVTNGLFAVRGADVLLLAAPGGV 214
>gi|66818713|ref|XP_643016.1| ribose-5-phosphate isomerase [Dictyostelium discoideum AX4]
gi|74857113|sp|Q551C2|RPIA_DICDI RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=Phosphoriboisomerase
gi|60471145|gb|EAL69113.1| ribose-5-phosphate isomerase [Dictyostelium discoideum AX4]
Length = 232
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 9/233 (3%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M K+ AA +A+ +V DG +G+G+GST K + + + V +P+S +
Sbjct: 1 MSLDNCKKVAAYKAVDDFVKDGCKIGIGSGSTIKYAVDRIKELGLK--NVICVPTSFQST 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ L +D++IDG DE+D LIKG GG L+EKI+A+++ + +++
Sbjct: 59 QLIVEAGLELSDLSRTPELDITIDGADEVDKDFNLIKGGGGCQLQEKIVAYSSKKLVIVA 118
Query: 120 DESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
D +K + +PIE+ + L+ + +LR+ N +G V+D
Sbjct: 119 DHTKESTELGENWKKGIPIEVVPMAYVPVMKKLESSSFSL--TPKLRMAVNKAGPVVTDN 176
Query: 177 GNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
GN+I+DA F + + ++ ++ IPGV+E GLF+NM A G +DG C V
Sbjct: 177 GNFIIDAQFSKPLSNIPQLAIDIKMIPGVVETGLFVNMTKIAYFGQTDGTCKV 229
>gi|241896476|ref|ZP_04783772.1| ribose-5-phosphate isomerase [Weissella paramesenteroides ATCC
33313]
gi|241870198|gb|EER73949.1| ribose-5-phosphate isomerase [Weissella paramesenteroides ATCC
33313]
Length = 278
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENF 61
+ K+ A A + DGM +G+GTGST + F+ LA KI G + + +S T +
Sbjct: 53 QIIQKKQAGEFAATLITDGMIVGLGTGSTVRFFIEALAAKINNEGLNITGVTTSNKTSSL 112
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K I L S ++V +DL+IDG DE+D +L IKG G ALL EKI+A + + I I DE
Sbjct: 113 AKSLGIKLASVDEVPMIDLTIDGADEVDHQLNGIKGGGAALLFEKIVALNSKKNIWIIDE 172
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK + +G+ LP+E+ +G + L R +D GNYI+
Sbjct: 173 SKYHEVIGQFPLPVEVVPYGSHHLLKKFLAADMQPTFR-----RTATGERVTTDVGNYII 227
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
D I PQ ++ L GV+EHGLF+ VD IIG
Sbjct: 228 DLHLNRIEYPQSLAYFLEQTIGVVEHGLFLKTVDEVIIGG 267
>gi|255035944|ref|YP_003086565.1| ribose 5-phosphate isomerase [Dyadobacter fermentans DSM 18053]
gi|254948700|gb|ACT93400.1| ribose 5-phosphate isomerase [Dyadobacter fermentans DSM 18053]
Length = 225
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 79/221 (35%), Positives = 130/221 (58%), Gaps = 6/221 (2%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AA+ A++Y+ +G +G+G+GS+A + + + + NG +Q +P+S T + +
Sbjct: 8 KALAAKEAVKYLSNGQIVGLGSGSSAYIAIAEIGELVKNGLDIQGVPTSEKTRALAESLN 67
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
IPL S E+V S+D++IDG DE L+LIKG G LL+EK++A + I+I D +K+V+
Sbjct: 68 IPLLSIEEVGSIDITIDGADEFTPDLQLIKGGGSFLLKEKVVASLSKAEIIITDSTKKVE 127
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG+ +PIE+ + N L+ + + LN ++R V++ GN ++D FG
Sbjct: 128 LLGKFTVPIEVIPYAQNYVLAQIGK------LNGLGKIRLADGKPLVTEQGNLLIDGDFG 181
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I DP +++ +L I GV+EHGLFIN+ I+G D
Sbjct: 182 LIQDPALLADQLIRIVGVVEHGLFINIAKKVIMGVGDTTIT 222
>gi|34112909|gb|AAQ62355.1| predicted ribose 5-phosphate isomerase [uncultured marine gamma
proteobacterium EBAC31A08]
Length = 212
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 7 KRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K N A++AI+Y+ + M LG+GTGST F+ L + + SS +
Sbjct: 5 KINVAKQAIEYIKNNLHPEMILGIGTGSTVNFFIEELKEH--RHKFAGAVSSSDASSKLL 62
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I + S DV + IDG DE+ LIKG GGA REKI+A A++ FI I D+S
Sbjct: 63 NENGIEVFSLNDVVDIAYYIDGADEVSPENCLIKGGGGAHTREKIVASASNEFICIVDQS 122
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LPIE+ + G R F++D GN+I+D
Sbjct: 123 KMVNLLGAFPLPIEVIPESRSLVARK----IISIGGIPTYRTG------FITDQGNHILD 172
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAII 219
I +P + + NIPGV+++G+F N ++
Sbjct: 173 ISNMDISNPTEMEALINNIPGVVDNGIFAANKPKTVLV 210
>gi|326693733|ref|ZP_08230738.1| ribose-5-phosphate isomerase A [Leuconostoc argentinum KCTC 3773]
Length = 231
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 111/219 (50%), Gaps = 7/219 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
KR A A Q + DGMT+G+GTGST F+ LA +I + + +S T +
Sbjct: 8 KRQAGETAAQLITDGMTVGLGTGSTVAYFLEALAARIRDEQLHIIGVTTSFKTAVQAQAL 67
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
I + +D ++DL++DG DE+D ++ IKG G A L EKI+A + R + I D+ K
Sbjct: 68 GITIVDIDDAPTIDLTVDGADEVDVQMNGIKGGGAAFLMEKIVAKNSKRIVWIVDQQKVH 127
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG LP+EI FG K ++ + LR V+D G+YIVD
Sbjct: 128 QQLGSFPLPVEIVPFGHGKLVAEFAQQQLH------PVLRLKDGEPVVTDMGHYIVDLHL 181
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I P+ + L GV+EHGLF+N+ D IIG G
Sbjct: 182 EVIDQPEELGKYLDGRVGVVEHGLFLNIADEIIIGQEHG 220
>gi|107022622|ref|YP_620949.1| ribose-5-phosphate isomerase A [Burkholderia cenocepacia AU 1054]
gi|116689571|ref|YP_835194.1| ribose-5-phosphate isomerase A [Burkholderia cenocepacia HI2424]
gi|170732875|ref|YP_001764822.1| ribose-5-phosphate isomerase A [Burkholderia cenocepacia MC0-3]
gi|254245539|ref|ZP_04938860.1| Ribose 5-phosphate isomerase [Burkholderia cenocepacia PC184]
gi|122978964|sp|Q1BWM9|RPIA_BURCA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|166200034|sp|A0K724|RPIA_BURCH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238688627|sp|B1K0R9|RPIA_BURCC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|105892811|gb|ABF75976.1| ribose-5-phosphate isomerase [Burkholderia cenocepacia AU 1054]
gi|116647660|gb|ABK08301.1| ribose-5-phosphate isomerase [Burkholderia cenocepacia HI2424]
gi|124870315|gb|EAY62031.1| Ribose 5-phosphate isomerase [Burkholderia cenocepacia PC184]
gi|169816117|gb|ACA90700.1| ribose 5-phosphate isomerase [Burkholderia cenocepacia MC0-3]
Length = 231
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R + SS
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYR-GAVSSSI 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H I + ++ S+ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 59 ATTERLKSHGIKVFDLNEIESLQVYVDGADEIDAGGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADASKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ ++ PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVETIV 227
>gi|296110544|ref|YP_003620925.1| ribose-5-phosphate isomerase A [Leuconostoc kimchii IMSNU 11154]
gi|295832075|gb|ADG39956.1| ribose-5-phosphate isomerase A [Leuconostoc kimchii IMSNU 11154]
Length = 231
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 125/226 (55%), Gaps = 8/226 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K++AA A Q + +GMT+G+GTGST F+ LA +I ++ + +S T N +
Sbjct: 8 KKHAAVAASQLIKNGMTVGLGTGSTVNYFLDALATRIRQENLKIVGVTTSFKTANRAESL 67
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
I + +D ++DL++DG DE+D+R+ IKG G A L EKI+AH ++R + I D KR
Sbjct: 68 GITIIDIDDAPAIDLTVDGADEVDNRMNGIKGGGAAFLMEKIVAHNSNRVVWIIDSQKRH 127
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LGR LP+EI FG K ++ K+ LR+ V+D G++IVD
Sbjct: 128 QQLGRFPLPVEIVPFGSGKLIADFKKRHLH------PVLRQQDGKTVVTDMGHFIVDLVL 181
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I P + L + GV+EHGLF+ + D IIGTS G L++
Sbjct: 182 NRIDQPYQLGQYLDSRIGVVEHGLFLGVADEIIIGTSSG-VRQLKR 226
>gi|297618908|ref|YP_003707013.1| ribose 5-phosphate isomerase [Methanococcus voltae A3]
gi|297377885|gb|ADI36040.1| ribose 5-phosphate isomerase [Methanococcus voltae A3]
Length = 235
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 9/233 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
+K A+ A + V D M +G+G+GSTA F+ L +I + +P+S + +
Sbjct: 9 TQDDLKLKVAQEASKLVKDEMVIGLGSGSTANMFIKELGKRIVDEELYIYGVPTSFDAKM 68
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL S + +DL++DG DE+ + L LIKG GG EK+I ++A F+V+
Sbjct: 69 LASQCGIPLVSLDQAGQIDLAVDGADEVEEGSLSLIKGGGGCHTMEKVIDYSAKEFVVLV 128
Query: 120 DESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V +P+E+ F + L+ L E+ + +R+ G ++D GN
Sbjct: 129 DESKVVASLGENTPVPLEVLPFAYSTVLNTLLEMNTA----PSIRVSGGKMGPVITDNGN 184
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D F I + + EL NI GV+E+G+F + D ++G + VL+K
Sbjct: 185 MIIDV-FTKIDEADVKEKELNNIVGVVENGIF-SKCDKVLVGNDSKKVKVLKK 235
>gi|33863778|ref|NP_895338.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9313]
gi|41017658|sp|Q7V5N8|RPIA_PROMM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33635361|emb|CAE21686.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. MIT
9313]
Length = 238
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A++ + DGM LG+G+GSTA + L K+A+G + + +S E
Sbjct: 5 QTQMKQAVAAAAVEQIKDGMVLGLGSGSTAALMIQALGAKLASGELRDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + V +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 MAAELGIPLRNLTAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVASRADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ + L E G +LR+ + +G V+D GN
Sbjct: 125 STKIVDRLNLGFLLPVEVLPGAWRQVQGRLAE----LGGIADLRMAQCKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVL 229
++D G I DP+ + + N+PGV+E+GLF+N+ D ++G SDG V
Sbjct: 181 VLDVSMAGGIGDPEDLECRINNLPGVLENGLFVNLTDEVLVGQISDGVAGVR 232
>gi|145589445|ref|YP_001156042.1| ribose 5-phosphate isomerase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189043821|sp|A4SYB4|RPIA_POLSQ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|145047851|gb|ABP34478.1| ribose-5-phosphate isomerase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 236
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 110/237 (46%), Gaps = 10/237 (4%)
Query: 1 MDALQMKRNAARRAIQYVVD---GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M+ Q+K+ A V+ G LG+GTGSTA F+ LA + SS
Sbjct: 1 MNQDQLKKMVGDAARDEVLKLPAGQILGVGTGSTANCFIDALAPH--KDHFAGTVSSSNA 58
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
T H + P DV S+ +DG DEID + +IKG GGAL REKIIA A +FI
Sbjct: 59 TTERLLKHGFKVLDPNDVVSLPAYVDGADEIDPQGHMIKGGGGALTREKIIASMAQQFIC 118
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLN----EELRLRRNGSGLFV 173
I D SK+V LG LP+EI L+++ L L + S FV
Sbjct: 119 ICDSSKQVPVLGNFALPVEIIPLAKGVVTRELEKLGGKVTLRLAKSTRADLNQTPSEPFV 178
Query: 174 SDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVL 229
+D G +I+D I DP I ++ I GVI GLF + ++ + G ++
Sbjct: 179 TDNGGWILDIAGLQIADPLKIESQINQIAGVITVGLFAKEKANILLVSNAAGVDRIV 235
>gi|134045445|ref|YP_001096931.1| ribose-5-phosphate isomerase A [Methanococcus maripaludis C5]
gi|166200053|sp|A4FWY7|RPIA_METM5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|132663070|gb|ABO34716.1| ribose-5-phosphate isomerase [Methanococcus maripaludis C5]
Length = 239
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 10/233 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
++ +K A++A + V D M +G+G+GSTA F+ L +I + +P+S ++
Sbjct: 14 NSDSLKLKVAKQAAKLVKDEMVVGLGSGSTANLFIQELGKRIVEEELYIYGVPTSFDSRM 73
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL S + +D+++DG DE+ S L LIKG GG EKI+ + A FIV+
Sbjct: 74 VASTAGIPLISLDQCGEIDIAVDGADEVCKSTLSLIKGGGGCHTMEKIVDYHAKEFIVLA 133
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DE K VD + +P+E+ F + L+ L ++ + +R G ++D GN
Sbjct: 134 DEGKLVDSLGDKTPVPLEVIPFAYSTVLNKLLKMNTA----PAIRTGSGKMGPVITDSGN 189
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D F I D + L NIPGV+E+G+F + D ++GTS + +L+K
Sbjct: 190 MIIDV-FISIDDAEETENMLNNIPGVLENGVF-SKCDKVLVGTSK-KVEILKK 239
>gi|330508824|ref|YP_004385252.1| ribose 5-phosphate isomerase [Methanosaeta concilii GP-6]
gi|328929632|gb|AEB69434.1| ribose 5-phosphate isomerase [Methanosaeta concilii GP-6]
Length = 232
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
V +GM +G+GTGST + L +++ +P+S E +I L S
Sbjct: 21 LVRNGMVVGLGTGSTVAWTIKRLGERVREEDLDFCGVPTSFQAEQLAIESNIRLTSLNQH 80
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+DL+IDG D++D L +IKG G A REK+++ +A F+++ D+SK V+ L +P+
Sbjct: 81 PVLDLAIDGADQVDINLMVIKGGGAAHTREKVVSCSAKWFVIVADQSKFVERLTW-PVPV 139
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ T L+E G LR G ++D GN+++D FG I DP+ ++
Sbjct: 140 EVIPIAFRLTGRRLEE----LGGKPVLRQGLRKDGPVITDNGNFVMDVDFGTIEDPRSLA 195
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++ IPGV+EHG+F N+ D + + G +
Sbjct: 196 AKISLIPGVVEHGIFDNL-DELYLARAGGMERI 227
>gi|311696105|gb|ADP98978.1| ribose-5-phosphate isomerase A [marine bacterium HP15]
Length = 227
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M+ ++K+ A+ AI Y+ +G+GTGSTA F+ +LA+ + SS
Sbjct: 2 MNQDELKKAVAKAAIDYIAPRLDSESVIGVGTGSTANFFIDMLAEFKTE--FDGAVASSE 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T K H IP++ ++ +DG DE + RL LIKG G AL REKI+A A FI
Sbjct: 60 ATAERLKSHGIPVYDLNSAGELEFYVDGADETNDRLELIKGGGAALTREKIVAAVAKTFI 119
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D+SK V LG+ LP+E+ + + + G + R V+D
Sbjct: 120 CIADDSKMVGILGKFPLPVEVIPMARSHVGREIVK----LGGDPVYREG------VVTDN 169
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
GN I+D I P + +L NI GV+ +GLF + D ++GT DG +
Sbjct: 170 GNIIIDVHNMDISQPIRVEEKLNNIVGVVTNGLFALRRADLLLLGTKDGVKSI 222
>gi|253998849|ref|YP_003050912.1| ribose 5-phosphate isomerase [Methylovorus sp. SIP3-4]
gi|313200943|ref|YP_004039601.1| ribose 5-phosphate isomerase [Methylovorus sp. MP688]
gi|253985528|gb|ACT50385.1| ribose 5-phosphate isomerase [Methylovorus sp. SIP3-4]
gi|312440259|gb|ADQ84365.1| ribose 5-phosphate isomerase [Methylovorus sp. MP688]
Length = 225
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 7/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ K+ A A V D M +G+GTGSTA F+ L+ + G R+ + SS +
Sbjct: 1 MNDKQLVAEHAASLVEDSMIVGLGTGSTANYFIEALSRRQRDEGLRITTVASSTISAIKA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
H +PL + +DL +DG DEI L L+KG G L+ EK++A AA RF+V+ D+S
Sbjct: 61 AEHGLPLLDISQLGHLDLYVDGADEITPGLTLLKGRGQDLVMEKLLARAAERFVVVADKS 120
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K+V + ++P+E+ AL++ ELRL + + V+ G+Y++
Sbjct: 121 KQVSRIGEKFVIPVEVMPAAWKIVRHALEKA----NGEAELRLNASKDNVAVTAHGSYVL 176
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
D F D + L N PGV+EHG+F + +I G+ V+
Sbjct: 177 DVRFPDWLDDAELDILLNNTPGVVEHGVFRGLASLVLIA-DQGQVDVV 223
>gi|124022142|ref|YP_001016449.1| ribose-5-phosphate isomerase A [Prochlorococcus marinus str. MIT
9303]
gi|166200057|sp|A2C6S4|RPIA_PROM3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|123962428|gb|ABM77184.1| Ribose 5-phosphate isomerase [Prochlorococcus marinus str. MIT
9303]
Length = 238
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A++ + DGM LG+G+GSTA + L K+A+G + + +S E
Sbjct: 5 QTQMKQAVAAAAVEQIKDGMVLGLGSGSTAALMIQALGAKLASGELREIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + V +DL+IDG DE+D +LIKG G ++EK++A A RF+V+ D
Sbjct: 65 MAAELGIPLRNLTAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVASRADRFVVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K VD L +LP+E+ + L E G +LR+ + +G V+D GN
Sbjct: 125 STKIVDRLNLGFLLPVEVLPGAWRQVQGRLAE----LGGIADLRMAQCKAGPVVTDQGNL 180
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVL 229
++D G I DP+ + + N+PGV+E+GLF+N+ D ++G SDG V
Sbjct: 181 VLDVSMAGGIGDPEDLECRINNLPGVLENGLFVNLTDEVLVGQISDGVAGVR 232
>gi|255725886|ref|XP_002547869.1| ribose-5-phosphate isomerase [Candida tropicalis MYA-3404]
gi|240133793|gb|EER33348.1| ribose-5-phosphate isomerase [Candida tropicalis MYA-3404]
Length = 252
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 14/235 (5%)
Query: 2 DALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
K+ AA RA+ + +G+G+GST + + N IP+ ++
Sbjct: 21 SVESAKKLAAYRAVDENFPPKAKVIGIGSGSTVIYVAERIGQ-LENKDSFICIPTGFQSK 79
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + L + E +D++ DG DE+D +L LIKG G L +EK++A AA +FIV+
Sbjct: 80 QLIIDNGLNLGAIEQYPELDIAFDGADEVDPQLNLIKGGGACLFQEKLVASAAKKFIVVA 139
Query: 120 D---ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG---SGLFV 173
D ESK++ R +PIEI K L ++ + ++ LR+ G +G +
Sbjct: 140 DYRKESKKLGESWRQGVPIEIVPNSYAKVTKQLYDMGAK-----KVDLRQGGKAKAGPVI 194
Query: 174 SDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+D N+++DA FG I DP+ + ++ + GV+E GLF +M D + G DG +V
Sbjct: 195 TDNNNFLLDADFGEIEDPEELHKQIKLLVGVVETGLFTDMADKSYFGEEDGSVVV 249
>gi|168057317|ref|XP_001780662.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667930|gb|EDQ54548.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 226
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 7/209 (3%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGF-RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL 80
M +G+GTGST+ + L N VQ + +S + + + DV+ +D+
Sbjct: 1 MVVGLGTGSTSSMAIEELGKLAQNKLKDVQFVATSYQSRVLSRQFGVKTMDLNDVNHIDI 60
Query: 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLG-RGMLPIEIDQ 139
+ DG DE+DS + LIKG G A EK++ A +++ DE+K V LG +P+E+
Sbjct: 61 AFDGADEVDSNMNLIKGGGAAHTMEKVVDSIAKHCVILVDETKVVKTLGLTFPVPVEVLP 120
Query: 140 FGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF-IPDPQIISGEL 198
F + L A + G E+R G +SD GN IVD F + +P + ++
Sbjct: 121 FALAPVLRA----LAALGGQPEIRTALRKDGPVMSDLGNMIVDVRFPDGVKNPAELERKI 176
Query: 199 CNIPGVIEHGLFINMVDCAIIGTSDGECL 227
IPGV+E+GLF+N+ ++GT DGE
Sbjct: 177 NMIPGVVENGLFVNVAHTVLVGTKDGEET 205
>gi|296109364|ref|YP_003616313.1| ribose 5-phosphate isomerase [Methanocaldococcus infernus ME]
gi|295434178|gb|ADG13349.1| ribose 5-phosphate isomerase [Methanocaldococcus infernus ME]
Length = 221
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 122/230 (53%), Gaps = 11/230 (4%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
+ +KR A+ A + + DG +G+G+GSTA F+ LA ++ + +P+S +
Sbjct: 1 MDLKRAVAKEAAKLIKDGSVVGLGSGSTAALFIEELAKRMENEDIAIFGVPTSYEAKLLA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IP+ S ED VD+++DG DE+ L LIKG GG EKI+ + A F+VI DE
Sbjct: 61 SHYGIPIVSIEDYD-VDIAVDGADEVRKKDLALIKGGGGCHTWEKIVDYNAKEFVVIVDE 119
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V +P+E+ + LKE G +RL G ++D GN+I+
Sbjct: 120 SK-VKDSLSFPVPVEVIPHSYRVVMKRLKE----LGGESVIRLGERKRGPVITDNGNFIL 174
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + + + + ++ NIPGV+E+G+F + VD ++GT G L+K
Sbjct: 175 DV-NIKVENAEELEEKINNIPGVVENGIF-SRVDKVLVGTKKG-VKALKK 221
>gi|328950692|ref|YP_004368027.1| Ribose-5-phosphate isomerase A [Marinithermus hydrothermalis DSM
14884]
gi|328451016|gb|AEB11917.1| Ribose-5-phosphate isomerase A [Marinithermus hydrothermalis DSM
14884]
Length = 227
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 91/220 (41%), Positives = 121/220 (55%), Gaps = 11/220 (5%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHHIPLHSP 72
+Q V GMT+G+GTGSTAK + + ++ G V+ +P+S + + IPL
Sbjct: 15 VQLVRSGMTVGLGTGSTAKYAIQEIGRRLREGSLEGVRGVPTSEASARLAREVGIPLVEL 74
Query: 73 EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRG 131
VDL+IDG DEI L LIKG GGALLREKI+ A F+VI D SK+V RG
Sbjct: 75 GP-EGVDLAIDGADEIAPDLALIKGLGGALLREKIVEATARVFVVIADSSKKVRALGERG 133
Query: 132 MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDP 191
+P+E+ FG TL AL+ G E+R+ G FV+D GN I D F I DP
Sbjct: 134 PVPVEVAPFGYRATLVALRR----LGGVPEVRMA--GGRPFVTDNGNLIADVRFDPIEDP 187
Query: 192 QIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ EL IPGV+E GLF+ M D A + +G L++
Sbjct: 188 ARLEQELKAIPGVLEVGLFVGMADLAFVAGPEG-VERLER 226
>gi|159905867|ref|YP_001549529.1| ribose-5-phosphate isomerase A [Methanococcus maripaludis C6]
gi|238686982|sp|A9AAC4|RPIA_METM6 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|159887360|gb|ABX02297.1| ribose 5-phosphate isomerase [Methanococcus maripaludis C6]
Length = 239
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 10/233 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D+ +K A++A + V D M +G+G+GSTA F+ L +I + +P+S ++
Sbjct: 14 DSDSLKLKVAKQAAKLVKDEMVVGLGSGSTANLFIQELGKRIVEEELYIYGVPTSFDSRM 73
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL S + +D+++DG DE+ S L LIKG GG EKI+ + A FIV+
Sbjct: 74 VASTAGIPLISLDQCGEIDIAVDGADEVCKSTLSLIKGGGGCHTMEKIVDYHAKEFIVLA 133
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DE K VD + +P+E+ F + L+ L ++ + +R G ++D GN
Sbjct: 134 DEGKLVDSLGDKTPVPLEVIPFAYSTILNKLLKMNTA----PVIRTGSGKMGPVITDNGN 189
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D F I D + L NIPGV+E+G+F + D +IGTS + +L+K
Sbjct: 190 MIIDV-FISIDDAEETEIMLNNIPGVLENGVF-SKCDKVLIGTSK-KVEILKK 239
>gi|323143033|ref|ZP_08077739.1| ribose 5-phosphate isomerase A [Succinatimonas hippei YIT 12066]
gi|322417227|gb|EFY07855.1| ribose 5-phosphate isomerase A [Succinatimonas hippei YIT 12066]
Length = 220
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K A A++Y+ LG+G+GST +F+ + D+ + SS T
Sbjct: 1 MTQDELKVMVAEEALKYIPKDGILGVGSGSTVVKFIEAI-DRFKIKVD-AAVSSSNKTTK 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + P DV + IDG DE++ +IKG G L REKI+A A +FI I D
Sbjct: 59 MLQDIGIRVLDPNDVEPYGVYIDGADEVNPAFDMIKGGGACLTREKILASMAEKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+SK V LG+ LP+E+ G + +L+ G N LR ++D G I
Sbjct: 119 KSKLVPTLGKFPLPVEVIPMGREQVARSLR----ALGGNPILRQG------CITDNGCEI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
+D I DP + ++ IPGV+ GLF D + T +G
Sbjct: 169 LDVHDFMIEDPLAMEAKINAIPGVVTVGLFAKRGADMVLYATEEGV 214
>gi|328946230|gb|EGG40374.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK1087]
Length = 225
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ I L S +DV VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIQLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG MLP+E+ Q+G + + + R+ FV+D N+I+D
Sbjct: 122 KMVEKLGAFMLPVEVVQYGAEQLFRRFERAGY------KPAFRQKAGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I +P + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENPVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|13430836|gb|AAK26040.1|AF360330_1 putative ribose 5-phosphate isomerase [Arabidopsis thaliana]
Length = 267
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 132/239 (55%), Gaps = 10/239 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
++K+ AA +A+++V GM +G+GTGSTAK + +++ + G + IP+S T
Sbjct: 28 TQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTTH 87
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IPL + VDLSIDG DE+D L L+KG GG+LLREK+I A+ +F+VI
Sbjct: 88 EQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKFVVIV 147
Query: 120 DESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG----LFV 173
DESK V ++G +P+E+ F + T L+E+ G +LR++ +G V
Sbjct: 148 DESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEAAPAV 207
Query: 174 SDGGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D NY+VD + I D ++ S + PGV++HG+F+ M I+ G V +
Sbjct: 208 TDNRNYVVDLYLERDIGDLEVASEAILRFPGVVKHGMFLGMATTLIVAGKFG-VTVKDR 265
>gi|256844618|ref|ZP_05550103.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 125-2-CHN]
gi|262047090|ref|ZP_06020049.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus MV-3A-US]
gi|256613159|gb|EEU18363.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 125-2-CHN]
gi|260572667|gb|EEX29228.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus MV-3A-US]
Length = 230
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 8/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V GM LG+GTGST F+ L + +G +++ ++ +S ++ + + D
Sbjct: 20 MVKSGMVLGVGTGSTVAFFIDALGKRKDEDGLKLKAIVTTSNRSKKQLEGLGFKVSELAD 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D + L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 80 IDQADLTVDGADRVTDNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHRLSGFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + ++ + R R +G+ +V+ GNYI+D +P P +
Sbjct: 140 VEVLPISCEQNFKRFEQEGL------KPRWRMDGNQRYVTHYGNYIIDLAADPVPAPHGL 193
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG +K
Sbjct: 194 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKK 230
>gi|313884790|ref|ZP_07818544.1| ribose 5-phosphate isomerase A [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619989|gb|EFR31424.1| ribose 5-phosphate isomerase A [Eremococcus coleocola
ACS-139-V-Col8]
Length = 232
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 7/229 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFC 62
MK NA + A+ +V DGM +G+GTGSTA F+ L +IANG ++ + +S+ +
Sbjct: 3 NMKENAGKYAVSHVRDGMVVGLGTGSTAYYFIKELGQQIANGDLQAIRAVATSKESFQLG 62
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
I + +DV VDL +DG DE IKG GGALL EKI++ + R I I +
Sbjct: 63 LDFGIDMVRIDDVEKVDLLVDGADEATLDFNGIKGGGGALLYEKILSLYSDRVIWIVSQD 122
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K D LG + +E+ +FG K + G+N R L+ +D NYI+D
Sbjct: 123 KIKDKLGAFPIAVEVIKFGAWKLFKTFHQA----GMNPSFRKA-GKDKLYCTDADNYIID 177
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G D Q ++ EL N+ GV++HGLF+N+ D I+GTSDG K
Sbjct: 178 LHLGPTDDIQRLAFELKNMVGVVDHGLFLNIADMIIVGTSDGNIDEHHK 226
>gi|256849021|ref|ZP_05554455.1| ribose-5-phosphate isomerase A [Lactobacillus crispatus MV-1A-US]
gi|293381279|ref|ZP_06627283.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 214-1]
gi|256714560|gb|EEU29547.1| ribose-5-phosphate isomerase A [Lactobacillus crispatus MV-1A-US]
gi|290922178|gb|EFD99176.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 214-1]
Length = 230
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 8/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V GM LG+GTGST F+ L + +G +++ ++ +S ++ + + D
Sbjct: 20 MVKSGMVLGVGTGSTVAFFIDALGKRKDEDGLKLKAIVTTSNRSKKQLEGLGFKVSELAD 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D + L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 80 IDQADLTVDGADRVADNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHRLSGFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + ++ + R R +G+ +V+ GNYI+D +P P +
Sbjct: 140 VEVLPISCEQNFKRFEQEGL------KPRWRMDGNQRYVTHYGNYIIDLAADPVPAPHGL 193
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG +K
Sbjct: 194 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKK 230
>gi|50293007|ref|XP_448936.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637338|sp|Q6FLF8|RPIA_CANGA RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|49528249|emb|CAG61906.1| unnamed protein product [Candida glabrata]
Length = 260
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 14/241 (5%)
Query: 4 LQMKRNAARRAIQYVVD---GMTLGMGTGSTAKEFMILLADKIANGF------RVQVIPS 54
KR AA RA+ ++ +G+G+GST + + + + IP+
Sbjct: 20 EDAKRAAAYRAVDENLNFDEHRIIGVGSGSTVVYVAERIGQYLKDEKYHDKVSKFICIPT 79
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ N + + + L S E VD++ DG DE+D L+LIKG G L +EK+++ +A
Sbjct: 80 GYQSRNLIQDNGLILGSIEQHPHVDIAFDGADEVDHNLQLIKGGGACLFQEKLVSTSAKI 139
Query: 115 FIVIGDESKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG 170
FIV+ D K+ D + +PIEI ++ L + + +G
Sbjct: 140 FIVVADSRKKSDTNLGINWKRGVPIEIVPSAWSRVQHDLTSILHA-NSAPVRQGGSAKAG 198
Query: 171 LFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
V+D N+++DA FG I DP+ + ++ + GV+E GLFI+ A G DG V+
Sbjct: 199 PVVTDNMNFLIDADFGEIQDPKALHEQIKMLVGVVETGLFIDNAHRAYFGKPDGSVEVID 258
Query: 231 K 231
K
Sbjct: 259 K 259
>gi|13541548|ref|NP_111236.1| ribose-5-phosphate isomerase A [Thermoplasma volcanium GSS1]
gi|34395816|sp|Q97AU2|RPIA_THEVO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|14324933|dbj|BAB59859.1| ribose-5-phosphate isomerase [Thermoplasma volcanium GSS1]
Length = 241
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 10/226 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D + KRNAA A YV GM +G+GTG+TA+ + L ++ +++ + +S+ +E
Sbjct: 3 DYEKQKRNAAVEAASYVKTGMVIGIGTGTTARYLIEELGRRVSEENLKIKGVCTSKKSEE 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + +DL+IDG D+++ LIKG GGALLREKI+A+ + VI D
Sbjct: 63 LARAAGIEISENPE-QIIDLTIDGADQVNLHGTLIKGGGGALLREKIVAYNSKEMYVIVD 121
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGN 178
K D G LP+E+ F TL L+++ LR+N G LF++D GN
Sbjct: 122 SRKIDDENFGSFPLPVEVVPFLHRMTLENLRKIC------PSTDLRKNSDGTLFITDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
YI D FG I + + ++ +IPGV++ GLF N+ D G DG
Sbjct: 176 YIADMKFGRIRETNELEKKIKSIPGVVDVGLFNNIADKIFEGNDDG 221
>gi|311105192|ref|YP_003978045.1| ribose 5-phosphate isomerase A [Achromobacter xylosoxidans A8]
gi|310759881|gb|ADP15330.1| ribose 5-phosphate isomerase A [Achromobacter xylosoxidans A8]
Length = 226
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ AA A+++V +G+GTGSTA F+ LA G + SS
Sbjct: 3 SQQELKQQAADAALEFVEQVAGPDAIIGVGTGSTADLFIDGLARF--KGRIGGTVASSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H + + D++++ + +DG DEID+ L +IKG GGAL REKI+A A RFI
Sbjct: 61 SAARLAGHGLKVLDLNDITTMPIYVDGADEIDANLHMIKGGGGALTREKIVASVAGRFIC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V +G+ LP+E+ A + G +LR FV+D G
Sbjct: 121 IADESKLVQTMGKFPLPVEVIPMARESVARA----LAMLGGQPKLREG------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
N I+D I D Q + + N+ GV+ GLF I D A++ T +G + ++
Sbjct: 171 NIILDVSGLSITDAQGLEARVNNLAGVVTCGLFAIAGADVALLATQNGIRRLDRR 225
>gi|295692458|ref|YP_003601068.1| ribose-5-phosphate isomerase a [Lactobacillus crispatus ST1]
gi|295030564|emb|CBL50043.1| Ribose-5-phosphate isomerase A [Lactobacillus crispatus ST1]
Length = 230
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V GM LG+GTGST F+ L + +G +++ ++ +S ++ + + D
Sbjct: 20 MVKSGMVLGVGTGSTVAFFIDALGKRKDEDGLKLKAIVTTSNRSKKQLEGLGFKVSELAD 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D + + L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 80 IDQADLTVDGADRVANNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHRLSGFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + ++ + R R +G+ +V+ GNYI+D +P P +
Sbjct: 140 VEVLPISCEQNFKRFEQEGL------KPRWRMDGNQRYVTHYGNYIIDLAADPVPAPHGL 193
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG +K
Sbjct: 194 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKK 230
>gi|206559922|ref|YP_002230686.1| ribose-5-phosphate isomerase A [Burkholderia cenocepacia J2315]
gi|238693080|sp|B4E852|RPIA_BURCJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|198035963|emb|CAR51855.1| ribose 5-phosphate isomerase A [Burkholderia cenocepacia J2315]
Length = 231
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 12/234 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR + A YV +G +G+GTGSTA F+ LA + + +R V S
Sbjct: 1 MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAA-VKSRYRGAVSSSVA 59
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
TE K H I + ++ ++ + +DG DEID+ +IKG GGAL REKI+A A F+
Sbjct: 60 TTERL-KSHGIKVFDLNEIDALQVYVDGADEIDAGGAMIKGGGGALTREKIVASVADTFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRV LG LPIE+ + G LR+ ++G+ +++D
Sbjct: 119 CIADGSKRVPVLGAFPLPIEVVPMARTAIGRR----VTALGGVPVLRVTKDGA-PYITDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
GN I+D I DP+ + PGV+ GLF + ++GT +G ++
Sbjct: 174 GNEIIDVKGLQIADPRGFEARVNAWPGVVTVGLFAERGANLCLLGTENGVETIV 227
>gi|281204150|gb|EFA78346.1| ribose-5-phosphate isomerase [Polysphondylium pallidum PN500]
Length = 264
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 14/234 (5%)
Query: 1 MDAL---QMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
MD + K+ A +A+ + G+ +G+G+GST K + + + G V +P+S
Sbjct: 34 MDKEILEKAKKLAGYKAVDDNLKSGLRVGIGSGSTIKYVVDRIKEL---GLDVICVPTSF 90
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + L +D++IDG DE+DS+L IKG G L+EKI+A A+ R +
Sbjct: 91 QSTQLIVNAGLTLSDLSRTPELDITIDGADEVDSQLNCIKGGGACQLQEKIVAAASKRLV 150
Query: 117 VIGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFV 173
++ D +K + +PIE+ ++ S L LR+ N +G V
Sbjct: 151 IVADFTKDSQAFGQQWKRGIPIEVVPMAYVPVMNK----LSSMSLKPVLRMAVNKAGPVV 206
Query: 174 SDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
SD N+I+DA F I + ++ ++ IPGV+E GLF+NM A G DG
Sbjct: 207 SDNANFIIDAQFESISNVAELATKIKMIPGVVETGLFVNMASRAYFGQQDGTVK 260
>gi|125718081|ref|YP_001035214.1| ribose-5-phosphate isomerase A [Streptococcus sanguinis SK36]
gi|166229250|sp|A3CNA9|RPIA_STRSV RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|125497998|gb|ABN44664.1| Ribose-5-phosphate isomerase A, putative [Streptococcus sanguinis
SK36]
gi|327474427|gb|EGF19833.1| ribose 5-phosphate isomerase [Streptococcus sanguinis SK408]
Length = 225
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 119/222 (53%), Gaps = 7/222 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V GM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKLAGIKAAEFVQSGMIVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ IPL S +DV VD+++DG DE+DS IKG GGALL EK++A +I + DES
Sbjct: 62 EGLGIPLKSIDDVDQVDVTVDGADEVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KMVEKLGAFKLPVEVVQYGAEQLFRRFERAGY------KPAFREKDDQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G I + + EL ++ GV+EHGLF MVD I+ G
Sbjct: 176 LDLGVIENSVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSG 217
>gi|222481036|ref|YP_002567273.1| ribose 5-phosphate isomerase [Halorubrum lacusprofundi ATCC 49239]
gi|254808713|sp|B9LU09|RPIA_HALLT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|222453938|gb|ACM58203.1| ribose 5-phosphate isomerase [Halorubrum lacusprofundi ATCC 49239]
Length = 240
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 16/235 (6%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR A A + V DG +G+GTGSTA + L D++ +G ++ + +S +
Sbjct: 8 DAAKRRAGESAAETVTDGEVVGLGTGSTAAHAIRRLGDRVDSGLDIRGVATSFASRELAA 67
Query: 64 IHHIPLHSPEDV-----SSVDLSIDGFDEI------DSRLRLIKGYGGALLREKIIAHAA 112
IPL ++ + +D++IDG D++ LIKG G A REK++ +A
Sbjct: 68 ECGIPLLDLDEAVGSDATGIDIAIDGADQVAVGEGESEVGPLIKGGGAAHAREKLVDASA 127
Query: 113 SRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLF 172
RF+V+ D SK L R +P+E+ G + A++ G LR G
Sbjct: 128 DRFLVVADPSKETPVLNRS-VPVEVLPAGRSAVAEAVR----AAGGEPTLRRAERKDGPV 182
Query: 173 VSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
V+D GN ++D FG I DP +S L PGV+EHG+F+ + D +GT G +
Sbjct: 183 VTDNGNLVLDCAFGEIADPDALSTTLSTTPGVVEHGIFVGLADEVHVGTETGVRV 237
>gi|226356001|ref|YP_002785741.1| ribose-5-phosphate isomerase [Deinococcus deserti VCD115]
gi|226317991|gb|ACO45987.1| putative ribose-5-phosphate isomerase [Deinococcus deserti VCD115]
Length = 228
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 10/230 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
D +K+ AA RA V GM +G+GTGSTAK + L +IA+G + + +S ++
Sbjct: 3 DLEALKKEAAVRAAALVESGMRVGLGTGSTAKYAIEELGRRIASGELKDIVGVATSEASD 62
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + +D++IDG DEID +L LIKG GGALLREK+ A RFIVI
Sbjct: 63 QLARQLGIPVEPLDPRP-LDIAIDGADEIDPKLNLIKGLGGALLREKLTEVQARRFIVIA 121
Query: 120 DESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D +K V + +P+EI +FG T+ L+ GL RLR+ G+ +V+D GN
Sbjct: 122 DHTKTVTHLGEKAPVPVEIAKFGFLSTIERLR----AMGLGG--RLRQPGAQPYVTDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+I DA DP + +L GV+E G F+ M + A + + D +
Sbjct: 176 HIFDAQLPESFDPATLERQLKGTLGVVETGFFLGMAERAFVASPDEVREL 225
>gi|116617745|ref|YP_818116.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096592|gb|ABJ61743.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 229
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 85/228 (37%), Positives = 120/228 (52%), Gaps = 8/228 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M+ K++A A + DGM +G+GTGST F+ LA +I + + +S T
Sbjct: 1 MNKQ--KKHAGEFAATLIEDGMVVGLGTGSTIAYFLEALAKRIQDEKMTIIGVTTSTKTA 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + V +DL+IDG DE+D L IKG G A L EKI+A + R I I
Sbjct: 59 RCAEELGIPIRDIDLVPMIDLTIDGADEVDQHLNGIKGGGAAFLMEKIVARYSRRVIWII 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE K LG+ LP+E+ FG K ++ LKE L+ +LRL N V+D G+Y
Sbjct: 119 DEQKLHSKLGQFPLPVEVVAFGSGKLIAELKER----HLHPKLRL-DNHQQPLVTDLGHY 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
IVD I P + L G++EHGLF+N+ D IIG +G +
Sbjct: 174 IVDLDLEQIDQPFELGRYLDGQIGIVEHGLFLNVADQVIIGQDEGYRI 221
>gi|316974693|gb|EFV58174.1| ribose 5-phosphate isomerase A [Trichinella spiralis]
Length = 368
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 2 DA-LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSSRN 57
D + K+ AA ++ +V G +G+GTGST L + ++ IP+S
Sbjct: 91 DQIEEAKKIAAYTCVKNHVQSGQVIGVGTGSTVVYVAKCLGEMYLKKQLEQIVCIPTSYQ 150
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ +PL E +DL IDG DE+D L IKG G L +EKI+ +++ F V
Sbjct: 151 ARTLILQNGLPLGDLELYPVLDLCIDGADEVDENLNCIKGGGACLTQEKIVINSSKYFYV 210
Query: 118 IGDESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
+ D K +PIE+ +++ G LR+ +G V+D
Sbjct: 211 VADSRKISKKLGDNWRHIPIEVVPMAYMPVRRTIEK---TLGGTCNLRMAVRKAGPVVTD 267
Query: 176 GGNYIVDAFFGFIP---DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
N+++D F I D I + I GV+E GLFI + A G +GE
Sbjct: 268 NANFVLDWIFPKIDKNVDWISIHNTIKLIVGVVETGLFIRLAQKAYFGKENGEV 321
>gi|33519721|ref|NP_878553.1| ribose-5-phosphate isomerase A [Candidatus Blochmannia floridanus]
gi|41017671|sp|Q7VRG1|RPIA_BLOFL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|33504066|emb|CAD83327.1| ribose 5-phosphate isomerase [Candidatus Blochmannia floridanus]
Length = 222
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 119/231 (51%), Gaps = 15/231 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ A++Y+ +G+GTGST F+ L+ I V S ++
Sbjct: 3 SKDKLKKLVGWEALKYIKSNTIIGVGTGSTVNYFIEALS-SIKQQIEGVVSSSQHSSNQL 61
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K+ IPL++ +++ +++ ID DEID +++IKG GGAL +EKIIA AA +FI I D+
Sbjct: 62 KKL-GIPLYNLNNLNDLEIYIDSADEIDLHMQMIKGGGGALTKEKIIAFAAKKFICIVDD 120
Query: 122 SKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V+ +G +P+E+ + + C G E R ++D GN I
Sbjct: 121 SKQVNILGRKGPIPVEVIPMARSVV----SKSLICLGGLPEYRNG------VITDNGNSI 170
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQ 230
+D + I D ++ + NIPGV+ GLF D A+IGT G +L
Sbjct: 171 LDVYNMNITDASLLEQRINNIPGVVSVGLFAQRKADIALIGTQKG-IKILN 220
>gi|309790711|ref|ZP_07685261.1| ribose 5-phosphate isomerase [Oscillochloris trichoides DG6]
gi|308227242|gb|EFO80920.1| ribose 5-phosphate isomerase [Oscillochloris trichoides DG6]
Length = 235
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 126/229 (55%), Gaps = 10/229 (4%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENF 61
+KR AA +A+ + GM +G+G GSTA + +A+ +A+G + +P + E
Sbjct: 8 DALKRLAAEQAVTLIQSGMVVGLGVGSTAIFAIRRIAELLASGELRDIVGVPCALRVEEE 67
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IPL + E+ S VDL+IDG DE+D +L LIKG G ALLREKI+A ++ R +++ DE
Sbjct: 68 AQRLGIPLTTLEEHSQVDLTIDGADEVDPQLNLIKGGGAALLREKIVAQSSRREVIVVDE 127
Query: 122 SKRVDFLGRGM-LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNY 179
+K LG +P+E+ +FG L E+ LRR G +D GNY
Sbjct: 128 AKLSPVLGTQWAIPVEVVRFGWGAQAR------WIASLGAEVALRRQPDGEPLTTDQGNY 181
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+D FG I D ++ +L G+++HGLF+ + I+ +DG +
Sbjct: 182 ILDCNFGPIADLTTLATQLSLRTGIVDHGLFLGLATDLIVAGADGIRHI 230
>gi|92112155|ref|YP_572083.1| ribose-5-phosphate isomerase A [Chromohalobacter salexigens DSM
3043]
gi|91795245|gb|ABE57384.1| ribose-5-phosphate isomerase [Chromohalobacter salexigens DSM 3043]
Length = 237
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 1 MDALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++KR A AI+ + +G+GTGSTA F+ LLA+ + + SS
Sbjct: 15 MTQDELKRAVAAAAIEEITPLLGRDTIIGVGTGSTANFFVDLLAEHKHDFL--GAVASSE 72
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T + H I ++ V +V + +DG DEID+ +IKG G AL REKI+A A RF+
Sbjct: 73 ATAKRLRDHGIDVYELNHVGTVPVYVDGADEIDAHFNMIKGGGAALTREKIVAACAERFV 132
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SKRVD LG LPIE+ + + + G+ R V+D
Sbjct: 133 CIADASKRVDVLGGFPLPIEVIPMARSYVAREMVK----LGITPVYRDG------VVTDN 182
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECL 227
GN I+D + DP+ + L NI GV+ +GLF D ++GT G
Sbjct: 183 GNQILDGYECLFEDPRAMEQRLNNIVGVVTNGLFAQRGADVLLLGTEHGVER 234
>gi|221486143|gb|EEE24413.1| hypothetical protein TGGT1_051660 [Toxoplasma gondii GT1]
Length = 259
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 88/254 (34%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSR 56
M+ + K+ A+ YV GM +G+GTG+TAK + + ++ G + +P+S
Sbjct: 1 MNPQDKAKQAVGYFAVDTYVRSGMKVGLGTGTTAKFVVERIGQRMQEGSLKDLLCVPTSE 60
Query: 57 NTENFCKIHHIPLHSPEDV-SSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASR 114
T + IPL + + + +D++IDG DEI L L+KG GGALLREK+IA AA
Sbjct: 61 ATRKQAESLGIPLTTLDGIADCLDVAIDGADEILPPTLGLVKGRGGALLREKMIAAAAKT 120
Query: 115 FIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALK--EVASCFGLNEELRLRRN--- 167
FIV DE+K V G LP+E+ F + T L G E R R
Sbjct: 121 FIVAADETKLVSNGIGSTGALPVEVVVFSSSHTKRLLSALPSVKRHGGRAEFRKRAGAAT 180
Query: 168 -----------GSGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVD 215
FV+D GNYIVD +F +PD + EL +IPGV+E G F+++
Sbjct: 181 GEKNGGQEDIPEEDRFVTDNGNYIVDLYFTETVPDLHEMDKELKSIPGVVETGFFLDLAS 240
Query: 216 CAIIGTSDGECLVL 229
+IG +DG L
Sbjct: 241 VCLIGKADGSVATL 254
>gi|254491837|ref|ZP_05105016.1| ribose 5-phosphate isomerase A [Methylophaga thiooxidans DMS010]
gi|224463315|gb|EEF79585.1| ribose 5-phosphate isomerase A [Methylophaga thiooxydans DMS010]
Length = 230
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 7/224 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
+ + K+ A A V M +G+GTGSTA F+ LA + +V + SS +
Sbjct: 5 NIMNPKQRVAVHAANLVEADMIVGLGTGSTANLFIEALAKRNRNEHLKVTTVSSSAISAV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K +P+ S + + +D+ +DG DE+ L L+KG G L+REK++A AA +F V+ D
Sbjct: 65 KAKEAGLPVVSIDSLDYLDMYVDGADEVTPDLTLLKGRGQDLVREKLLASAADQFYVLVD 124
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
ESK V+ +P+E+ L+ LK+ G ELR+ G + + G+
Sbjct: 125 ESKLVEHIGQNFPVPVEVLPEAWKLVLAQLKQ----HGGVGELRMNAAGDNVAFTAHGSL 180
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
++D F I D ++ L I GV+EHG+F ++ IG
Sbjct: 181 VLDMSFEHI-DSLELTMLLDTIAGVVEHGIFSDLASAVFIGGEQ 223
>gi|221503640|gb|EEE29331.1| ribose 5-phosphate isomerase, putative [Toxoplasma gondii VEG]
Length = 259
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 88/254 (34%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSR 56
M+ + K+ A+ YV GM +G+GTG+TAK + + ++ G + +P+S
Sbjct: 1 MNPQDKAKQAVGYFAVDTYVRSGMKVGLGTGTTAKFVVERIGQRMQEGSLKDLLCVPTSE 60
Query: 57 NTENFCKIHHIPLHSPEDV-SSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASR 114
T + IPL + + + +D++IDG DEI L L+KG GGALLREK+IA AA
Sbjct: 61 ATRKQAESLGIPLTTLDGIADCLDVAIDGADEILPPTLGLVKGRGGALLREKMIAAAAKT 120
Query: 115 FIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALK--EVASCFGLNEELRLRRN--- 167
FIV DE+K V G LP+E+ F + T L G E R R
Sbjct: 121 FIVAADETKLVSNGIGSTGALPVEVVVFSSSHTKRLLSALPSVKRHGGRAEFRKRAGAAT 180
Query: 168 -----------GSGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVD 215
FV+D GNYIVD +F +PD + EL +IPGV+E G F+++
Sbjct: 181 GEKNGGQEDIREEDRFVTDNGNYIVDLYFTETVPDLHEMDKELKSIPGVVETGFFLDLAS 240
Query: 216 CAIIGTSDGECLVL 229
+IG +DG L
Sbjct: 241 VCLIGKADGSVATL 254
>gi|288870663|ref|ZP_06114895.2| ribose 5-phosphate isomerase A [Clostridium hathewayi DSM 13479]
gi|288866349|gb|EFC98647.1| ribose 5-phosphate isomerase A [Clostridium hathewayi DSM 13479]
Length = 243
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 6/227 (2%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ AA A + DGM G+GTG+T + +A + G + V+P+S T +
Sbjct: 23 EQKKAAAVMAAGELRDGMVAGLGTGTTVYYLIQEIARLVKEGLTIHVLPTSEQTRSLASQ 82
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+IPL S + + DL+IDG D +DS +KG GGAL REK+IA A R I I DESK
Sbjct: 83 LNIPLLSTDTAPAADLAIDGVDGVDSHFWSVKGGGGALFREKLIASNARRVIWILDESKL 142
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
++ L LPIE+ FG + + + + G RLR N F++D GNYI+D
Sbjct: 143 LNHLSEVPLPIEVVPFGFSYVM----KEVAALGFRP--RLRLNDGMPFLTDNGNYILDLA 196
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + S L ++ GV+E GLF + + IIG +DG ++ +
Sbjct: 197 GDSSMDYREKSALLKSLTGVVETGLFPDFCEKLIIGGADGVRVLENR 243
>gi|197105452|ref|YP_002130829.1| ribose-5-phosphate isomerase A [Phenylobacterium zucineum HLK1]
gi|196478872|gb|ACG78400.1| ribose-5-phosphate isomerase A [Phenylobacterium zucineum HLK1]
Length = 228
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 4/214 (1%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
V GM +G+GTGSTA F+ LA + + +P+S+ T I + + S
Sbjct: 18 LVESGMVVGLGTGSTAAWFVRALAAR---KLDIVGVPTSQATGELAASLGIRIAELGETS 74
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+DL++DG DEI L LIKG G ALLREK++ A+ R +VI D +K+V LG+ LPIE
Sbjct: 75 QIDLTVDGADEIGPGLSLIKGGGAALLREKLVWEASKRCVVIADAAKQVPTLGKYPLPIE 134
Query: 137 IDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISG 196
+ FG T + + + + RLR +D GN I DA G I +P ++
Sbjct: 135 VVTFGHQTTALRICDALAECDVGVAPRLRVRDGQPVRTDEGNLIYDAACGRIEEPAALAA 194
Query: 197 ELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
L ++ GV++HGLF+++ D A+IG G L+
Sbjct: 195 ALKSVTGVVDHGLFLDLADRALIGGP-GGVTTLE 227
>gi|77359619|ref|YP_339194.1| ribose-5-phosphate isomerase A [Pseudoalteromonas haloplanktis
TAC125]
gi|76874530|emb|CAI85751.1| ribose 5-phosphate isomerase A [Pseudoalteromonas haloplanktis
TAC125]
Length = 251
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA A+++V + +G+GTGST F+ L I + + V S +T
Sbjct: 35 MTQDELKKAAAWAALEFVKENTIVGVGTGSTVNHFIDALG-SIKDTIKGAVSSSEASTAR 93
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + DV +D+ +DG DEI++ +IKG G AL REKI+A A +F+ I D
Sbjct: 94 LKAL-GIEVFELNDVDVLDVYVDGADEINAHNEMIKGGGAALTREKIVAAVAKQFVCIVD 152
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
++K V LG LP+E+ + G + R V+D GN I
Sbjct: 153 DTKLVATLGGFPLPVEVIPMARSYVARE----LLKLGGDPVYRQG------VVTDNGNVI 202
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDG 224
+D I + + ++ I GV+ +GLF D IIGT +G
Sbjct: 203 LDVHNLNITQAKQLETQINQIVGVVTNGLFAERGADKVIIGTKNG 247
>gi|332978220|gb|EGK14951.1| ribose 5-phosphate isomerase A [Psychrobacter sp. 1501(2011)]
Length = 224
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 18/234 (7%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++K+ A+ A+ + DGM LG+GTGST + LL G + SS+ T+
Sbjct: 6 MSQQLKLKQEVAKAALASIDDGMILGVGTGSTVNCLIDLLPQVKLKG----AVASSKVTQ 61
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + I + V +DL IDG DE++ L+LIKG GGAL REKI+A A+ F+ +
Sbjct: 62 DKLEALGIEVMDLNFVGELDLYIDGTDEVNPNLQLIKGGGGALTREKIVAAASKEFLCLV 121
Query: 120 DESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK V +PIE+ + G R FV+D GN
Sbjct: 122 DESKWVTQLGVEFPVPIEVLPQARSYVARE----LVKLGGEPVYREG------FVTDYGN 171
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
I+D + I + L NI GV+ +G+F N D +I S G +LQ+
Sbjct: 172 LILDTYNLQIDSASEMEQTLNNIVGVVCNGIFAANQADKLLIAKSTG-VELLQR 224
>gi|110643061|ref|YP_670791.1| ribose-5-phosphate isomerase A [Escherichia coli 536]
gi|123048895|sp|Q0TDT9|RPIA_ECOL5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|110344653|gb|ABG70890.1| ribose 5-phosphate isomerase A [Escherichia coli 536]
Length = 231
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 107/233 (45%), Gaps = 17/233 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 13 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFINALGTM--KGQIEGAVSSSDASTE 70
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 71 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 130
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 131 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 180
Query: 181 VDAFFGFIPDPQIISG--ELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+D I P + + G + N D A+IGT DG +++
Sbjct: 181 LDVHGMEILGPDSDGKRHKCDSWRG--DCWFVANRGADVALIGTPDGVKTIVK 231
>gi|162450029|ref|YP_001612396.1| ribose-5-phosphate isomerase [Sorangium cellulosum 'So ce 56']
gi|161160611|emb|CAN91916.1| Ribose-5-phosphate isomerase [Sorangium cellulosum 'So ce 56']
Length = 232
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 119/224 (53%), Gaps = 7/224 (3%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
A A+ V GM LG+GTG ++ F+ L +++ G +++ + +S +E + +IP
Sbjct: 13 RIANAALARVESGMLLGLGTGRASEAFIRRLGERVRRGLQIKGVATSERSEALARRENIP 72
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-F 127
S E+V + +++DG DE+ L LIKG GGALLRE+++A+ A++FI++ K V+
Sbjct: 73 TVSLEEVERLHVAVDGADEVTPDLGLIKGLGGALLRERVVAYEAAQFIILVTPEKLVEKL 132
Query: 128 LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF 187
R +PIE+ F V + G +R +G F +D N+I+D FG
Sbjct: 133 GSRVPIPIEVVPFAVTTATR----HLTALGGKPAIRKNADGY-PFQTDNHNWILDTAFGP 187
Query: 188 IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ P + + +IPGV++ GLF++M ++ G L +
Sbjct: 188 MDAPAAVDARIRSIPGVVDTGLFLDMATLVLVADP-GAVRELTR 230
>gi|160872400|ref|ZP_02062532.1| ribose 5-phosphate isomerase A [Rickettsiella grylli]
gi|160872921|ref|ZP_02063052.1| ribose 5-phosphate isomerase A [Rickettsiella grylli]
gi|159120308|gb|EDP45647.1| ribose 5-phosphate isomerase A [Rickettsiella grylli]
gi|159121199|gb|EDP46537.1| ribose 5-phosphate isomerase A [Rickettsiella grylli]
Length = 222
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++K+ A + Y+ G LG+G+GST + LA I + V+P+S TE
Sbjct: 5 NLERLKKKLAETTLAYISPGSILGLGSGSTINHLITALAA-IRHKIE-GVVPASLETEKR 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K HIP+ + L ID DE++ L+LIKG GGAL REKIIA A+ F+ I DE
Sbjct: 63 LKELHIPVLDLNSAGELMLYIDSADEVNPHLQLIKGGGGALTREKIIASASQNFMCIIDE 122
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK V LG+ LP+E+ + + + G LR F++D GN I+
Sbjct: 123 SKYVGMLGQKGLPLEVIPMARSYVAREIVK----LGGFPFLR------DKFITDNGNIIL 172
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
D DP + L NIPGV+ +GLF + +I +G ++
Sbjct: 173 DTQHWDFTDPIKLERLLNNIPGVVSNGLFAQRPANKLLIANKNGIKII 220
>gi|294506406|ref|YP_003570464.1| Ribose 5-phosphate isomerase [Salinibacter ruber M8]
gi|294342734|emb|CBH23512.1| Ribose 5-phosphate isomerase [Salinibacter ruber M8]
Length = 231
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 119/215 (55%), Gaps = 7/215 (3%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
+Q V DGM +G+G+GST + L +I G VQ +P+S TE + H IPL S +
Sbjct: 15 VQLVRDGMCVGLGSGSTTAYALDFLGRRIQDEGLHVQGVPTSFATERRARTHGIPLTSLD 74
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRGM 132
D S+DL++DG DE+D RLIKG GGA REK++AH A RF+V+ D +K V +
Sbjct: 75 DTPSLDLALDGADEVDDAFRLIKGGGGAHAREKVVAHQADRFVVLVDPTKEVRRLGTQFP 134
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF-IPDP 191
+P+E+ ++A G LR G V+D G +I+DA F I +P
Sbjct: 135 VPVEVLPMAATPVMNA----LDAAGATPTLRTADAKDGPVVTDQGLWIIDARFPDGIENP 190
Query: 192 QIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
++ LC+ PGV++HGLF+NM ++G D
Sbjct: 191 DALNRRLCDRPGVLDHGLFLNMATDVLVGRPDESV 225
>gi|258592905|emb|CBE69214.1| ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI) [NC10
bacterium 'Dutch sediment']
Length = 219
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 11 ARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLH 70
A A++++ DG +G+GTG A F+ L D + G RV + +S+ T IPL
Sbjct: 2 ASMALEFIKDGDVVGLGTGRAATAFVRALGDAVKAGLRVTAVSTSQVTAALAVQLGIPLA 61
Query: 71 SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLG 129
+ E+VSS+D++ DG DE+D RL LIKGYGGAL+REKI+A ++ R +++ K V
Sbjct: 62 TLEEVSSIDITFDGADEVDPRLDLIKGYGGALIREKIVAASSRRLVILVGAEKLVPVLGS 121
Query: 130 RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIP 189
RG+LP+E+ FG LS + + G + R FV+D GN I+D +
Sbjct: 122 RGILPVEVVPFG----LSLCRRCLTELGCRPAV--RTQDGQPFVTDNGNQILDCSISPLS 175
Query: 190 DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
DP + IPGV+ GLFI M D ++ DG+ + +Q+
Sbjct: 176 DPAAFERAILEIPGVVGTGLFIGMADTVLV--QDGDAVHVQQ 215
>gi|50305687|ref|XP_452804.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636902|sp|Q6CTD5|RPIA_KLULA RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|49641937|emb|CAH01655.1| KLLA0C13541p [Kluyveromyces lactis]
Length = 274
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 11/238 (4%)
Query: 2 DA-LQMKRNAARRAIQYV---VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
D Q KR AA RA+ +G+G+G+T L + + IP+
Sbjct: 38 DQLEQAKRIAAYRAVDENFDAKTHKVVGVGSGTTVVYVAERLGEYMDEKTNFVCIPTGFQ 97
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
++ + + L E VD++ DG DE+D+ L+LIKG G L +EK+++ +A +FIV
Sbjct: 98 SKQLILSNKLQLGVIEQFPEVDIAFDGADEVDAGLQLIKGGGACLFQEKLVSTSAKKFIV 157
Query: 118 IGDESKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL-RRNGSGLF 172
+ D K+ + +PIE+ + LS LK +C + +R +G
Sbjct: 158 VADSRKKSPKYLGTNWKKGVPIEVVPSSYVRVLSDLKNKLNCK--SAMVRQGGSAKAGPV 215
Query: 173 VSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
V+D N+I+DA FG I DP+ + ++ + GV+E GLFI+ + A G DG + +
Sbjct: 216 VTDNCNFIIDADFGEITDPRKLHQDIKLLVGVVETGLFIDNAEKAYFGYPDGSVDLQE 273
>gi|239624758|ref|ZP_04667789.1| ribose 5-phosphate isomerase [Clostridiales bacterium 1_7_47_FAA]
gi|239521144|gb|EEQ61010.1| ribose 5-phosphate isomerase [Clostridiales bacterium 1_7_47FAA]
Length = 247
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 117/227 (51%), Gaps = 8/227 (3%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
AA +A + D M LG+GTGST ++ LA+++ G + +S TE + IP
Sbjct: 1 MAALKAASEIQDNMVLGLGTGSTVYYLILKLAERVRGGLHIHAAATSARTEGLAAHYGIP 60
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL 128
L + L+IDG D IDS IKG GGAL REK+IA A R I I D+SK V L
Sbjct: 61 LIPLHQAEQIHLAIDGVDAIDSDFYSIKGGGGALFREKVIASKARRVIWIMDQSKLVPTL 120
Query: 129 GRGMLPIEIDQFGVNKTLSALKEVASC-------FGLNEELRLRRN-GSGLFVSDGGNYI 180
LP+E+ F ++ + GL+ R + G+ +F++D GN+I
Sbjct: 121 NGLTLPVEVVPFATGFVEEQVRAMGFISRLRRNGDGLDGNNPDRDDSGASVFLTDNGNHI 180
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+D D ++++G L + GV+E G+F N+ + IIGT DG +
Sbjct: 181 LDLQGKEGVDYRLMAGRLKALTGVVETGVFGNICEKIIIGTEDGVIV 227
>gi|237834547|ref|XP_002366571.1| ribose 5-phosphate isomerase, putative [Toxoplasma gondii ME49]
gi|211964235|gb|EEA99430.1| ribose 5-phosphate isomerase, putative [Toxoplasma gondii ME49]
Length = 259
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 88/254 (34%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSR 56
M+ + K+ A+ YV GM +G+GTG+TAK + + ++ G + +P+S
Sbjct: 1 MNPQDKAKQAVGYFAVDTYVRSGMKVGLGTGTTAKFVVERIGQRMQEGSLKDLLCVPTSE 60
Query: 57 NTENFCKIHHIPLHSPEDV-SSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASR 114
T + IPL + + + +D++IDG DEI L L+KG GGALLREK+IA AA
Sbjct: 61 ATRKQAESLGIPLTTLDGIADCLDVAIDGADEILPPTLGLVKGRGGALLREKMIAAAAKT 120
Query: 115 FIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALK--EVASCFGLNEELRLRRN--- 167
FIV DE+K V G LP+E+ F + T L G E R R
Sbjct: 121 FIVAADETKLVSNGIGSTGALPVEVVVFSGSHTKRLLSALPSVKRHGGRAEFRKRAGAAT 180
Query: 168 -----------GSGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVD 215
FV+D GNYIVD +F +PD + EL +IPGV+E G F+++
Sbjct: 181 GEKNGGQEDIREEDRFVTDNGNYIVDLYFTETVPDLHEMDKELKSIPGVVETGFFLDLAS 240
Query: 216 CAIIGTSDGECLVL 229
+IG +DG L
Sbjct: 241 VCLIGKADGSVATL 254
>gi|308048411|ref|YP_003911977.1| ribose-5-phosphate isomerase [Ferrimonas balearica DSM 9799]
gi|307630601|gb|ADN74903.1| ribose-5-phosphate isomerase [Ferrimonas balearica DSM 9799]
Length = 219
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K+ AA A+ YV +G+GTGST F+ L I + R V S +TE
Sbjct: 1 MSQDALKKAAALAALDYVERDSIVGVGTGSTVNHFIDALG-TIRDQIRGAVSSSEASTER 59
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + VS + + +DG DEID ++ +IKG G AL REKI+A A +FI I D
Sbjct: 60 LKAL-GIEVFDMNSVSDLSIYVDGADEIDHQMAMIKGGGAALTREKIVASVAQKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK V+ LG LP+E+ + A+ + G + R ++D G I
Sbjct: 119 ESKLVNTLGEFPLPVEVIPMARSAVARAIVK----LGGDPVYREG------CITDNGCQI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D I +P+ + EL N+ GV+ +GLF D ++GT++G +
Sbjct: 169 LDVHSWRITEPKKLEAELNNLVGVVTNGLFAMRGADVLLLGTAEGVKTI 217
>gi|16081930|ref|NP_394337.1| ribose-5-phosphate isomerase A [Thermoplasma acidophilum DSM 1728]
gi|30173375|sp|Q9HJT5|RPIA_THEAC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|10640155|emb|CAC12007.1| ribose-5-phosphate isomerase related protein [Thermoplasma
acidophilum]
Length = 241
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 121/226 (53%), Gaps = 10/226 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
D + K NAA +A +YV GM +G+GTG+T+ + + ++ G +++ + +SR TE+
Sbjct: 3 DYEKQKMNAAIKAAEYVRSGMIVGLGTGTTSYYLINEIGRRVREEGLKIRAVCTSRRTED 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + I + +DL+IDG D++ LIKG GGALLREKI+A+ + VI D
Sbjct: 63 LAKQNGIEVIQGTK-DQIDLTIDGADQVGMYGTLIKGGGGALLREKIVAYNSKEMYVIVD 121
Query: 121 ESKR-VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGN 178
K G LP+EI F +TL L+ G+ + LR N G FV+D GN
Sbjct: 122 SRKIEAAHFGSFPLPVEIVPFMHMRTLENLR------GICTQTDLRMNEKGEPFVTDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
YI D G I DP + L +IPGV+E GLF + GT +G
Sbjct: 176 YIADMHMGMIDDPINLERSLKSIPGVVEVGLFNGIAKRIFEGTDEG 221
>gi|319779481|ref|YP_004130394.1| Ribose 5-phosphate isomerase A [Taylorella equigenitalis MCE9]
gi|317109505|gb|ADU92251.1| Ribose 5-phosphate isomerase A [Taylorella equigenitalis MCE9]
Length = 226
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ A AI+YV+ T+G+GTGSTA F+ LL++ + SS
Sbjct: 4 TQDELKKEVATEAIKYVLEMVGPNDTIGVGTGSTANFFIELLSNH--KDKFRDTVASSVK 61
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+E IP+ ++ + +DG DEI+ L LIKG GGALLREK++A A+ FI
Sbjct: 62 SEELLTKFGIPVVDLNMRETIKVYVDGADEINPNLHLIKGGGGALLREKVVASASDYFIC 121
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V+ LG LPIE+ V+ +KE G + LR F++D G
Sbjct: 122 IADESKLVEKLGAFKLPIEVIPMAVSVVSRKIKE----LGGDAFLREG------FLTDNG 171
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
N I+D + D + + ++ IPGV+ G F + + A++ + +G + K
Sbjct: 172 NQIIDVAGFSVSDARELETQINQIPGVVCCGFFALRPPELALVSSQNGVRTIKLK 226
>gi|75765507|pdb|1XTZ|A Chain A, Crystal Structure Of The S. Cerevisiae
D-Ribose-5-Phosphate Isomerase: Comparison With The
Archeal And Bacterial Enzymes
Length = 264
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 20/244 (8%)
Query: 4 LQMKRNAARRAIQYV---VDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPS 54
KR AA RA+ D +G+G+GST + + + + IP+
Sbjct: 19 EDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPT 78
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ N + + L S E +D++ DG DE+D L+LIKG G L +EK+++ +A
Sbjct: 79 GFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKT 138
Query: 115 FIVIGDESKRVDF----LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-- 168
FIV+ D K+ R +PIEI + + L E E++ +R+ G
Sbjct: 139 FIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDLLEQLHA----EKVDIRQGGSA 194
Query: 169 -SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+G V+D N+I+DA FG I DP+ + E+ + GV+E GLFI+ A G SDG
Sbjct: 195 KAGPVVTDNNNFIIDADFGEISDPRKLHREIKLLVGVVETGLFIDNASKAYFGNSDGSVE 254
Query: 228 VLQK 231
V +K
Sbjct: 255 VTEK 258
>gi|6324669|ref|NP_014738.1| Rki1p [Saccharomyces cerevisiae S288c]
gi|6226036|sp|Q12189|RPIA_YEAST RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|190360232|sp|A6ZNU5|RPIA_YEAS7 RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|1164942|emb|CAA64017.1| YOR3174c [Saccharomyces cerevisiae]
gi|1420269|emb|CAA99292.1| RKI1 [Saccharomyces cerevisiae]
gi|151945719|gb|EDN63960.1| ribose-5-phosphate ketol-isomerase [Saccharomyces cerevisiae
YJM789]
gi|190407427|gb|EDV10694.1| ribose-5-phosphate ketol-isomerase [Saccharomyces cerevisiae
RM11-1a]
gi|256272984|gb|EEU07948.1| Rki1p [Saccharomyces cerevisiae JAY291]
gi|285814979|tpg|DAA10872.1| TPA: Rki1p [Saccharomyces cerevisiae S288c]
gi|323352078|gb|EGA84615.1| Rki1p [Saccharomyces cerevisiae VL3]
Length = 258
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 20/244 (8%)
Query: 4 LQMKRNAARRAIQYV---VDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPS 54
KR AA RA+ D +G+G+GST + + + + IP+
Sbjct: 19 EDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPT 78
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ N + + L S E +D++ DG DE+D L+LIKG G L +EK+++ +A
Sbjct: 79 GFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKT 138
Query: 115 FIVIGDESKRVDF----LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-- 168
FIV+ D K+ R +PIEI + + L E E++ +R+ G
Sbjct: 139 FIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDLLEQLHA----EKVDIRQGGSA 194
Query: 169 -SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+G V+D N+I+DA FG I DP+ + E+ + GV+E GLFI+ A G SDG
Sbjct: 195 KAGPVVTDNNNFIIDADFGEISDPRKLHREIKLLVGVVETGLFIDNASKAYFGNSDGSVE 254
Query: 228 VLQK 231
V +K
Sbjct: 255 VTEK 258
>gi|87125363|ref|ZP_01081209.1| ribose 5-phosphate isomerase [Synechococcus sp. RS9917]
gi|86167132|gb|EAQ68393.1| ribose 5-phosphate isomerase [Synechococcus sp. RS9917]
Length = 231
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 9/229 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ A A+ + DGM LG+G+GSTA + L K+A G + + +S E
Sbjct: 1 MKQAVAAAAVDAIQDGMVLGLGSGSTAALMIQGLGAKLAAGELRDIVGVTTSFQGEVLAA 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL S V +DL+IDG DE+D +LIKG G ++EK++A A RFIV+ D +K
Sbjct: 61 ELGIPLRSLNAVERIDLAIDGADEVDPAFQLIKGGGACHVQEKLVAARAERFIVVVDATK 120
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD L +LP+E+ + + + G ELR+ +G V+D GN ++D
Sbjct: 121 LVDRLNLGFLLPVEVLPGAWRQVQAR----LASLGGAAELRMATRKAGPVVTDQGNLVLD 176
Query: 183 AFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVL 229
FG I DP+ + + NIPGV+E+GLF+++ D ++G +DG V
Sbjct: 177 VRFGEGIADPRALEQTINNIPGVLENGLFVDLADEVLVGEVTDGVAGVR 225
>gi|116753679|ref|YP_842797.1| ribose-5-phosphate isomerase A [Methanosaeta thermophila PT]
gi|116665130|gb|ABK14157.1| ribose-5-phosphate isomerase [Methanosaeta thermophila PT]
Length = 206
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 7/210 (3%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81
M +G+GTGST + + +A G + +P+S +E IPL + +DL+
Sbjct: 1 MVVGLGTGSTVAWTIRAIGRMVAEGLDILAVPTSYQSEALAIECGIPLTTLSQNPVLDLA 60
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFG 141
IDG D+ID R+ IKG G A REK+++ AA RF+V+ D SKRV+ L R +P+E+ F
Sbjct: 61 IDGVDQIDIRMNAIKGGGAAHTREKVVSIAARRFVVVADGSKRVEVLNR-PVPVEVLPFA 119
Query: 142 VNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNI 201
G +R R G ++D GN+++D FG I DP ++ E+ I
Sbjct: 120 AMVVERE----LVRIGGYPVVRQARMKDGPVITDNGNFVMDVSFGEIRDPATLAQEISQI 175
Query: 202 PGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
PGV++HG+F + D I +G V+++
Sbjct: 176 PGVVDHGIFTKI-DELHIAH-NGTVEVIRR 203
>gi|323302869|gb|EGA56673.1| Rki1p [Saccharomyces cerevisiae FostersB]
Length = 258
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 20/244 (8%)
Query: 4 LQMKRNAARRAIQYV---VDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPS 54
KR AA RA+ D +G+G+GST + + + + IP+
Sbjct: 19 EDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPT 78
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ N + + L S E +D++ DG DE+D L+LIKG G L +EK+++ +A
Sbjct: 79 GFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKT 138
Query: 115 FIVIGDESKRVDF----LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-- 168
FIV+ D K+ R +PIEI + + L E E++ +R+ G
Sbjct: 139 FIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDLLEQLHA----EKVDIRQGGSA 194
Query: 169 -SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+G V+D N+I+DA FG I DP+ + E+ + GV+E GLFI+ A G SDG
Sbjct: 195 KAGPVVTDNNNFIIDADFGEISDPRKLHREIKXLVGVVETGLFIDNASKAYFGNSDGSVE 254
Query: 228 VLQK 231
V +K
Sbjct: 255 VTEK 258
>gi|329895804|ref|ZP_08271180.1| Ribose 5-phosphate isomerase A [gamma proteobacterium IMCC3088]
gi|328922166|gb|EGG29523.1| Ribose 5-phosphate isomerase A [gamma proteobacterium IMCC3088]
Length = 225
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 2 DALQMKRNAARRAIQYVVDGMT----LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++KR A+ A+ ++ +T LG+GTGSTA EF+ LL + SS
Sbjct: 4 TQDELKREVAQAALDFIAPHLTPASMLGIGTGSTANEFINLLGTSG--LPFSGTVASSEA 61
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + IP+ V S+ IDG DE + L LIKG G AL REKI+A A+ F+
Sbjct: 62 SAQRLRDFGIPVLDLSLVDSLQFYIDGADEANGALELIKGGGAALTREKIVAAASEFFVC 121
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V LG+ LPIE+ N ++AL+ G E+R ++D
Sbjct: 122 IADESKEVATLGKFPLPIEVIPMAENIVINALR----AMGGRPEVREG------VITDNR 171
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
N I+D I DP+ + I GV+ +GLF + D ++ G +
Sbjct: 172 NIIIDVHDFMIADPKATETAINQITGVVCNGLFAHRGADLLLLSGQTGVRSLR 224
>gi|55379222|ref|YP_137072.1| ribose-5-phosphate isomerase A [Haloarcula marismortui ATCC 43049]
gi|67461328|sp|Q5UZD7|RPIA_HALMA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|55231947|gb|AAV47366.1| ribose 5-phosphate isomerase A [Haloarcula marismortui ATCC 43049]
Length = 228
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 11/235 (4%)
Query: 1 MDA---LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M K+ A A + V D +G+GTGSTA + + + G V +P+S
Sbjct: 1 MKQGGSDAAKQAAGESAAEAVEDATVVGLGTGSTAAYAIRAIGQAVDAGLDVVGVPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + IPL +DV SVDL+IDG DE+ S LIKG G A REKI+ +A RF+V
Sbjct: 61 SRQLARDCGIPLADLDDV-SVDLAIDGADEVASGN-LIKGGGAAHAREKIVDASADRFLV 118
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
+ D +K L +P+E+ + ++A++E G + LR G V+D G
Sbjct: 119 VADPTKEAAVL-SYPVPVEVLPMARSTVVTAVEE----LGGDPTLRRAERKDGPVVTDNG 173
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG-ECLVLQK 231
N ++D F I DP ++ +L +PGV+EHGLF+ M D +GT+DG L K
Sbjct: 174 NLVLDCDFNSIHDPAALASDLAALPGVVEHGLFVGMADEIHVGTADGVTVRTLSK 228
>gi|94985366|ref|YP_604730.1| ribose 5-phosphate isomerase [Deinococcus geothermalis DSM 11300]
gi|94555647|gb|ABF45561.1| ribose 5-phosphate isomerase [Deinococcus geothermalis DSM 11300]
Length = 228
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/231 (36%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
D +K+ AA RA+ V GM +G+GTGSTAK ++ + +++A+G V + +S +E
Sbjct: 3 DLEALKKEAALRAVTLVRSGMRVGLGTGSTAKYAILAIGERLASGDLRGVVGVATSDASE 62
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IP+ + +DL+IDG DEID L LIKG GGALLREK+ A + ++I
Sbjct: 63 VLARQVGIPVEPLDPRP-LDLAIDGADEIDPALNLIKGLGGALLREKLTEVQARQLVIIA 121
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D +K V + LP+EI +FG T+ L+ L RLR+ G+ FV+D GN
Sbjct: 122 DHTKLVTRLGEQAPLPVEIARFGFLSTIERLRA------LVPGGRLRQPGAQPFVTDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
YI DA DP + +L GV+E G F+ M D A + +G +
Sbjct: 176 YIYDAQLPQSFDPVALERQLKGTLGVVETGFFLGMADLAFVAAPEGVRELR 226
>gi|293604434|ref|ZP_06686841.1| ribose 5-phosphate isomerase [Achromobacter piechaudii ATCC 43553]
gi|292817311|gb|EFF76385.1| ribose 5-phosphate isomerase [Achromobacter piechaudii ATCC 43553]
Length = 227
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 115/232 (49%), Gaps = 17/232 (7%)
Query: 2 DALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ AA A+Q+V + +G+GTGSTA F+ LA G + SS
Sbjct: 3 SQQELKQQAADAALQFVEEVAGPDVIIGVGTGSTADLFIDGLARF--KGRIGGTVASSER 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H + + DV+++ + +DG DEID+ L +IKG GGAL REKI+A A RFI
Sbjct: 61 SAARLAGHGLKVLDLNDVATMPIYVDGADEIDADLSMIKGGGGALTREKIVASVAERFIC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V LG+ LP+E+ A + G LR FV+D G
Sbjct: 121 IADESKLVQTLGKFPLPLEVIPMARESVARA----LAAMGGQPRLREG------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
N I+D I D + + N+PGV+ GLF + D A++ T G +
Sbjct: 171 NIILDVSGLAISDARAFEARVNNLPGVVTCGLFALAGADVALLATQSGIRRL 222
>gi|259149577|emb|CAY86381.1| Rki1p [Saccharomyces cerevisiae EC1118]
Length = 258
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/244 (31%), Positives = 118/244 (48%), Gaps = 20/244 (8%)
Query: 4 LQMKRNAARRAIQYV---VDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPS 54
KR AA RA+ D +G+G+GST + + + + IP+
Sbjct: 19 EDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPT 78
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ N + + L S E +D++ DG DE+D L+LIKG G L +EK+++ +A
Sbjct: 79 GFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKT 138
Query: 115 FIVIGDESKRVDF----LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-- 168
FIV+ D K+ R +PIEI K + L E E++ +R+ G
Sbjct: 139 FIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVKVKNDLLEQLHA----EKVDIRQGGSA 194
Query: 169 -SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+G V+D N+I+DA FG I DP+ + E+ + GV+E GLFI+ A G SDG
Sbjct: 195 KAGPVVTDNNNFIIDADFGEISDPRKLHREIKLLVGVVETGLFIDNASKAYFGNSDGSVE 254
Query: 228 VLQK 231
V +K
Sbjct: 255 VTEK 258
>gi|196009442|ref|XP_002114586.1| hypothetical protein TRIADDRAFT_58573 [Trichoplax adhaerens]
gi|190582648|gb|EDV22720.1| hypothetical protein TRIADDRAFT_58573 [Trichoplax adhaerens]
Length = 266
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 10/219 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
+ +G+G+GST + LA+++ ++ IP+S + + L E
Sbjct: 50 KNNQVVGIGSGSTIVYAVRRLAERMTDENLQIVCIPTSFQARQLIIENKLTLSDLERHPQ 109
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL-----GRGM 132
+D++IDG DE+D L IKG GG EKIIA +A +FIVI D K L
Sbjct: 110 LDVAIDGADEVDDYLNCIKGGGGCHTLEKIIASSAKKFIVIADYRKDSKTLGEKVLWTKG 169
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
+P+E+ F + + + FG LR+ N +G V+D GN+I+D F D
Sbjct: 170 IPVEVLPFAYATVKAKIHK----FGGTPVLRMAINKAGPVVTDSGNFILDVTFNSAMDWS 225
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ +L IPGV++ GLF+ M + A G DG +
Sbjct: 226 KTNQDLTMIPGVVDTGLFVGMAEKAYFGMEDGNVKSRDR 264
>gi|74012668|ref|XP_532963.2| PREDICTED: similar to ribose 5-phosphate isomerase A (ribose
5-phosphate epimerase), partial [Canis familiaris]
Length = 216
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 20 DGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
+ LG+G+GST + +A+++ + IP+S + + L + +
Sbjct: 1 NNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQLILQYGLTLSDLDRHPEI 60
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF---LGRGMLPI 135
DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIVI D K +PI
Sbjct: 61 DLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPI 120
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ A+ + FG ELR+ N +G V+D GN+I+D F + ++
Sbjct: 121 EVIPMAYVPVSRAVTQ---KFGGVIELRMAINKAGPVVTDNGNFILDWKFDRVHKWSEVN 177
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ IPGV++ GLFINM + G DG + +K
Sbjct: 178 TAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 213
>gi|83815292|ref|YP_444654.1| ribose 5-phosphate isomerase A [Salinibacter ruber DSM 13855]
gi|83756686|gb|ABC44799.1| ribose 5-phosphate isomerase A [Salinibacter ruber DSM 13855]
Length = 274
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 7/213 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
V DGM +G+G+GST + L +I A VQ +P+S TE + H IPL S +D
Sbjct: 60 LVRDGMCVGLGSGSTTAYALEFLGRRIQAEDLDVQGVPTSFATERRARTHGIPLTSLDDT 119
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGMLP 134
S+DL++DG DE+D RLIKG GGA REK++AH A RF+V+ D +K V + +P
Sbjct: 120 PSLDLALDGADEVDDAFRLIKGAGGAHAREKVVAHQADRFVVLVDPTKEVSRLGTQFPVP 179
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF-IPDPQI 193
+E+ ++A G LR G V+D G +I+DA F I +P
Sbjct: 180 VEVLPMAATPVMNA----LDAAGATPTLRTADAKDGPVVTDQGLWIIDARFPDGIENPDA 235
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
++ LC+ PGV++HGLF++M ++G D
Sbjct: 236 LNRRLCDRPGVLDHGLFLDMATDVLVGRPDESV 268
>gi|47093670|ref|ZP_00231425.1| ribose 5-phosphate isomerase A [Listeria monocytogenes str. 4b
H7858]
gi|47017966|gb|EAL08744.1| ribose 5-phosphate isomerase A [Listeria monocytogenes str. 4b
H7858]
Length = 205
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 5/210 (2%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81
M +G+GTGST + L + + NG + + +S T + IPL S DV+ +D++
Sbjct: 1 MVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETSKQAQNLGIPLKSLNDVAEIDIT 60
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFG 141
IDG DEID+ + IKG GGALLREK++A A+ + I + E K V LG+ LPIE+ FG
Sbjct: 61 IDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPIEVIPFG 120
Query: 142 VNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNI 201
+ L++ L R++ ++V++ GNYI+D D ++ +L I
Sbjct: 121 WKQIERTLEKEHVQTILR-----RQSSGEIYVTNNGNYILDIVNQTFRDAEMWQEKLAQI 175
Query: 202 PGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
PG++EHGLF++ VD + ++GE +++K
Sbjct: 176 PGIVEHGLFLHYVDIIVCAKANGEIELIKK 205
>gi|108757006|ref|YP_633632.1| ribose-5-phosphate isomerase [Myxococcus xanthus DK 1622]
gi|108460886|gb|ABF86071.1| ribose-5-phosphate isomerase [Myxococcus xanthus DK 1622]
Length = 236
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 9/223 (4%)
Query: 7 KRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
K+ AA A+ ++ GM +G+GTGSTA + LA A G + +P+SR TE +
Sbjct: 14 KQAAAEWAVDGFLQPGMVVGLGTGSTAAFAVQRLAALRAQGRLLDIVGVPTSRATEALAR 73
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+P+ + + +D+++DG DE+ L LIKG GGALLREKI+A A+ R +++ D K
Sbjct: 74 SLGVPVSTLDAHPVLDVTLDGADEVAPDLSLIKGGGGALLREKIVAQASRRVVIVVDAGK 133
Query: 124 RVDFLGRGML-PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
LG P+E+ FG + G +R G F++D GN ++D
Sbjct: 134 LSPVLGTHWPVPVEVMSFGW----RSQARFLESLGARVTVRQGAGGE-PFLTDQGNLVLD 188
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
FG I P ++ L G++ HGLF+N+ ++ +G
Sbjct: 189 CAFGPIDAPAALAASLGARAGIMGHGLFLNLATDLVVAGPEGV 231
>gi|323335506|gb|EGA76791.1| Rki1p [Saccharomyces cerevisiae Vin13]
gi|323346526|gb|EGA80813.1| Rki1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 258
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 20/244 (8%)
Query: 4 LQMKRNAARRAIQYV---VDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPS 54
KR AA RA+ D +G+G+GST + + + + IP+
Sbjct: 19 EDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPT 78
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ N + + L S E +D++ DG DE+D L+LIKG G L +EK+++ +A
Sbjct: 79 GFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKT 138
Query: 115 FIVIGDESKRVDF----LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-- 168
FIV+ D K+ R +PIEI + L E E++ +R+ G
Sbjct: 139 FIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVXVKNDLLEQLHA----EKVDIRQGGSA 194
Query: 169 -SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+G V+D N+I+DA FG I DP+ + E+ + GV+E GLFI+ A G SDG
Sbjct: 195 KAGPVVTDNNNFIIDADFGEISDPRKLHREIKLLVGVVETGLFIDNASKAYFGNSDGSVE 254
Query: 228 VLQK 231
V +K
Sbjct: 255 VTEK 258
>gi|313228904|emb|CBY18056.1| unnamed protein product [Oikopleura dioica]
Length = 234
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 117/234 (50%), Gaps = 11/234 (4%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M KR AAR A+ +V +G LG+G+GST + +A++ ++ +PSS
Sbjct: 1 MSGVEAAKRLAARTAVDAFVKNGFKLGIGSGSTVVYAVERIAERARAENLQLTCVPSSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
H + L E +DL+IDG DE+D +L LIKG GG LL+EKI+ +AA F+V
Sbjct: 61 ARQLIIEHGLLLSDLERTPELDLAIDGADEVDEKLTLIKGGGGCLLQEKIVVNAAKEFVV 120
Query: 118 IGDESKRV---DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
+ D K + +PIE+ KE+ + FG +LR+ + +G V+
Sbjct: 121 VADYRKNSGALGQQWKKGVPIEVLPLAYRPV---QKEIETRFGGTAKLRMAKAKAGPLVT 177
Query: 175 DGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
D G +I+D F I EL NIPGV+EHGLFI A G DG
Sbjct: 178 DNGMFIIDWEFEESPTDGWTKIGMELNNIPGVVEHGLFIGCAKKAYFGNEDGTV 231
>gi|325116252|emb|CBZ51805.1| Ribose 5-phosphate isomerase A,related [Neospora caninum Liverpool]
Length = 262
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 83/257 (32%), Positives = 126/257 (49%), Gaps = 28/257 (10%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSR 56
M+ + K+ A+ +V GM +G+GTG+TAK + + ++ G + +P+S
Sbjct: 1 MNAQDKAKQTVGYYAVDTFVRSGMRVGLGTGTTAKFVVERIGQRMQEGTLKDLLCVPTSE 60
Query: 57 NTENFCKIHHIPLHSPEDVSS-VDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASR 114
T + IPL + + + +D++IDG DEI L L+KG GGALLREK++A AA
Sbjct: 61 ATRKQAESLAIPLTTLDGIDDCLDVAIDGADEILPPALGLVKGRGGALLREKMVAAAAKT 120
Query: 115 FIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALK--EVASCFGLNEELRLRR---- 166
F+V DESK V G LP+E+ F + T + G E R +
Sbjct: 121 FVVAADESKLVSNGIGSTGALPVEVVVFSNSHTKRLISALPSVRSHGGRAEFRRKTPAAS 180
Query: 167 -------------NGSGLFVSDGGNYIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFIN 212
FV+D GNYIVD +F + D + E+ +IPGV+E GLF++
Sbjct: 181 GETRDAKGDLEDVKEEDRFVTDNGNYIVDLYFKDTVTDLHEMDKEIKSIPGVVETGLFLD 240
Query: 213 MVDCAIIGTSDGECLVL 229
+ +IG +DG L
Sbjct: 241 LASVCLIGKADGSVATL 257
>gi|218780813|ref|YP_002432131.1| ribose 5-phosphate isomerase [Desulfatibacillum alkenivorans AK-01]
gi|254808708|sp|B8FL28|RPIA_DESAA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|218762197|gb|ACL04663.1| Ribose-5-phosphate isomerase [Desulfatibacillum alkenivorans AK-01]
Length = 230
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A++Y+ GM +G+G+GSTA + +A + G + IPSS TE
Sbjct: 3 SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL E+ + +D++IDG DE+D L LIKG GGALLREK++A A + I+I
Sbjct: 63 EVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIV 122
Query: 120 DESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK D LG LP+E+ F G +R + G F +D N
Sbjct: 123 DESKISDKLGTIFALPVEVVPFATAS----ETRFLESLGAKVTVRENQLGKA-FKTDNHN 177
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I+DA FG + D I L GV+EHGLF+ I+ +DG
Sbjct: 178 RILDADFGPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGIRE 226
>gi|32491251|ref|NP_871505.1| ribose-5-phosphate isomerase A [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|30173253|sp|Q8D252|RPIA_WIGBR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|25166458|dbj|BAC24648.1| rpiA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 218
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ AA AI+Y+ G +G+G+GSTA+ F+ L + SSR + +
Sbjct: 1 MIEEKLKKQAAWAAIKYIKPGDIVGVGSGSTAEYFIDALGS--IKNLIKGTVSSSRISSS 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K +IPL +VS +++ +DG DEI+ + +IKG G AL REKIIA AA +FI I D
Sbjct: 59 KLKDLNIPLFDLNEVSLLNIYVDGADEINQKKHMIKGKGAALTREKIIASAAKKFICIVD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK V LGR LPIE+ + G + + R +++ GN +
Sbjct: 119 SSKFVHVLGRAPLPIEVIPMARTLV----SKKIIDIGGSPKYRKG------IITENGNVL 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
+D I D + ++ NIPGV+ GLF + D AII +G ++
Sbjct: 169 LDVHNLIILDSLFLEEKINNIPGVVSVGLFAHRAADIAIISGKNGIKII 217
>gi|147919901|ref|YP_686347.1| ribose-5-phosphate isomerase A [uncultured methanogenic archaeon
RC-I]
gi|110621743|emb|CAJ37021.1| ribose-5-phosphate isomerase [uncultured methanogenic archaeon
RC-I]
Length = 234
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 8/218 (3%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPE 73
+ V DGM +G+GTGST + LL + G + +P+S +TE IPL S
Sbjct: 22 CELVTDGMIVGLGTGSTVAHSIRLLGRWVKEEGLNIVGVPTSYSTEALAIECGIPLTSLA 81
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
+D++IDG D++D+ L IKG G A REKI+A +A +F+++ D+ K L R +
Sbjct: 82 ASPVLDIAIDGADQVDASLNAIKGGGAAHTREKIVASSAKQFVIVADDKKFSSILDRS-V 140
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQI 193
P E+ + V + + G +R G ++D GN+++D FG I +P +
Sbjct: 141 PTEVLPYAVKLVEREILK----LGGTCTVRTGTGKDGPIITDNGNFVLDCAFGQIKEPAL 196
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ +L IPG++EHG+F N +G + VL++
Sbjct: 197 LGDKLSRIPGLVEHGIFTN-AAMVYVGYEN-RVEVLRR 232
>gi|18312359|ref|NP_559026.1| ribose 5-phosphate isomerase [Pyrobaculum aerophilum str. IM2]
gi|18159809|gb|AAL63208.1| ribose 5-phosphate isomerase [Pyrobaculum aerophilum str. IM2]
Length = 223
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 6/226 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+KR AR AI+ V GM +G+G+G+TA+EF+ LA+ + + S +
Sbjct: 2 LKRLLAREAIRLVKSGMVVGLGSGTTAREFIKALAEAGVDDVLLVATSSDSEILAYEVGL 61
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
L V +DL++DG DE+ L+KG GGALLREKI+ +AA +F+V+ +E K V
Sbjct: 62 GDRLRPMWAVDRIDLAVDGADEVTKDKVLLKGKGGALLREKIVDYAAEKFVVLIEEHKLV 121
Query: 126 D-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+ +P+E+ + +++ FG +LR G V+D GNYI+D
Sbjct: 122 ERIPSNNPVPVEVVPWAWRFVAREVEKR---FGGVAKLRQDGGKLGPVVTDNGNYIIDWN 178
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVD-CAIIGTSDGECLVL 229
DP + EL IPGV+E+G+F D ++ +SDG L
Sbjct: 179 PPGFIDPY-LEDELKAIPGVVENGVFSKRRDATILVASSDGTIKTL 223
>gi|113954159|ref|YP_731560.1| ribose-5-phosphate isomerase A [Synechococcus sp. CC9311]
gi|123327612|sp|Q0I7L2|RPIA_SYNS3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|113881510|gb|ABI46468.1| ribose 5-phosphate isomerase A [Synechococcus sp. CC9311]
Length = 238
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 123/233 (52%), Gaps = 9/233 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
QMK+ A A+ + DGM +G+G+GSTA + L ++A G + + +S E
Sbjct: 5 QTQMKQAVAEAAVAQIRDGMVVGLGSGSTAALMIEGLGARLAAGQLRDIVGVTTSFQGEV 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
IPL + +DL+IDG DE+D +LIKG G ++EK++A A RFIV+ D
Sbjct: 65 LAAELGIPLRALNATDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVADRAERFIVVVD 124
Query: 121 ESKRVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K V L +LP+E+ + S LK G ELR+ +G V+D GN
Sbjct: 125 STKLVRCLNLDFLLPVEVLPGAWVQVQSRLK----SMGGVAELRMATRKAGPVVTDQGNL 180
Query: 180 IVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT-SDGECLVLQ 230
++D F I DP + ++ N+PGV+E+GLF+N+ D ++G DG V
Sbjct: 181 VLDVRFENGISDPIALERDINNLPGVLENGLFVNLADEVLVGEIKDGVAGVRS 233
>gi|146328682|ref|YP_001209433.1| ribose 5-phosphate isomerase [Dichelobacter nodosus VCS1703A]
gi|189043813|sp|A5EVM0|RPIA_DICNV RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|146232152|gb|ABQ13130.1| ribose 5-phosphate isomerase [Dichelobacter nodosus VCS1703A]
Length = 218
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ +K A +++V + +TLG+G+GST F+ L + + +S +
Sbjct: 1 MNQQLLKEKVAAAVLEHVPENITLGVGSGSTVLCFIEALKQAKRQFRDI--VAASETSSK 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + D+ +DG DEI+ +IKG G AL REKIIA AA FI I D
Sbjct: 59 ALEAAGFRVRDLNACDPPDIYVDGADEINDDKIMIKGGGAALTREKIIASAAKEFICIID 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
ESK+V LGR + +E+ + + + L E R R+ V+D G++I
Sbjct: 119 ESKKVAQLGRFPVAVEVIPMARSYVAREIVK------LGAEPRWRQG----VVTDNGHWI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLV 228
+D + + + + + I GV+E G+F D ++ SDGE ++
Sbjct: 169 LDVHYLDLTAAERMEARINTIAGVVECGIFAQRRADKVLMSQSDGEIVL 217
>gi|228474783|ref|ZP_04059514.1| ribose 5-phosphate isomerase A [Staphylococcus hominis SK119]
gi|314935761|ref|ZP_07843113.1| ribose 5-phosphate isomerase A [Staphylococcus hominis subsp.
hominis C80]
gi|228271446|gb|EEK12814.1| ribose 5-phosphate isomerase A [Staphylococcus hominis SK119]
gi|313656326|gb|EFS20066.1| ribose 5-phosphate isomerase A [Staphylococcus hominis subsp.
hominis C80]
Length = 229
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 7/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
DA ++K A+ + D M LG+GTGST + + +A++I + V + +S +E
Sbjct: 3 DAKELKLMTTDDAVAQIQDNMILGIGTGSTIELLIPKIAERIQQDNLNVTGVCTSNKSEF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K ++I + D++ ++L+IDG DEIDS L LIKG GGAL REK+I A +FIV+ D
Sbjct: 63 LAKQYNINVVDINDITYINLAIDGADEIDSDLNLIKGGGGALFREKVIDEMARKFIVLAD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
ESK V+ LPIE+D+F ++ + R N F++D GNY
Sbjct: 123 ESKMVNYLGETFKLPIEVDKFNWLLVSKKIEAYHDI-----SVERRMNEDIPFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP + L ++ GV+E G F++M AIIGT +G ++ +K
Sbjct: 178 ILDCELKSKIDPYQLHEFLIHLTGVLETGYFLDMTTQAIIGTQEGIKVINKK 229
>gi|241952727|ref|XP_002419085.1| phosphoriboisomerase, putative; ribose-5-phosphate isomerase,
putative; ribose-5-phosphate ketol-isomerase, putative
[Candida dubliniensis CD36]
gi|223642425|emb|CAX42670.1| phosphoriboisomerase, putative [Candida dubliniensis CD36]
Length = 263
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 9/236 (3%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
K+ AA +A+ + D +G+G+GST + ++N IP+ ++
Sbjct: 30 VESAKKLAAYKAVDENFPKDAKVIGIGSGSTVIYAAERIGQ-LSNKDSFICIPTGFQSKQ 88
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + E +D++ DG DE+D L LIKG G L +EK++A +A +FIV+ D
Sbjct: 89 LIIDNGLKLGTIEQYPDIDIAFDGADEVDPHLNLIKGGGACLFQEKLVATSAKKFIVVAD 148
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K+ D L R +PIEI +K + L + + ++ + +G ++D
Sbjct: 149 YRKKSDKLGQLWRQGVPIEIVPNSYSKIIQELSKKLAAKNVDLRQG-GKAKAGPIITDNN 207
Query: 178 NYIVDAFFG--FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+++DA FG I + + ++ + GV+E GLF NM D A G DG V K
Sbjct: 208 NFLLDADFGEIEIEKVEKLHEQIKLLVGVVETGLFTNMADKAYFGEEDGSVSVWSK 263
>gi|297180605|gb|ADI16816.1| ribose 5-phosphate isomerase [uncultured gamma proteobacterium
HF0010_11K06]
Length = 225
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 112/231 (48%), Gaps = 16/231 (6%)
Query: 5 QMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
+ K+ AR+A +Y+ LG+GTGST F+ L ++ +I SS +
Sbjct: 7 ETKQAVARKAYEYLATKLHKDCILGIGTGSTTNFFIQELINQKPE--IKAIISSSVASTQ 64
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + DV S D IDG DEI+ R +IKG GGAL REKIIA A+ +FI I D
Sbjct: 65 LLEEAGLEVSELNDVGSPDFYIDGADEINDRFEMIKGGGGALTREKIIASASKKFICICD 124
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+V LG+ + IE+ + + G E R+ FVSD GN I
Sbjct: 125 SSKKVKLLGKFPVAIEVIPMARSYVARQMV----VKGGTPEYRVG------FVSDNGNQI 174
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D + P E+ NIPGV+ +G+F ++ DG VL+K
Sbjct: 175 IDVRNLKLNVPYDFENEINNIPGVVANGIFAARKADCLVVDKDGVPEVLEK 225
>gi|326802699|ref|YP_004320517.1| ribose 5-phosphate isomerase A [Aerococcus urinae ACS-120-V-Col10a]
gi|326650226|gb|AEA00409.1| ribose 5-phosphate isomerase A [Aerococcus urinae ACS-120-V-Col10a]
Length = 230
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 10/227 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
MD K R+A V D +G+GTGSTA F+ L ++ G ++ + SS +
Sbjct: 1 MDN---KELVGRQAAYLVEDHTVVGLGTGSTAWYFIDELGKRVQEEGLSLKAVSSSIKSI 57
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ K I + + V +VDL+IDG DE IKG GGALL EKI+A + R I +
Sbjct: 58 DQAKALGIEVLPIDQVQAVDLTIDGVDEFTDDFDGIKGGGGALLEEKIVATYSKRIIWVA 117
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+E K V LG L +E+ + G ++ G +R NG LF +D NY
Sbjct: 118 EERKHVKKLGAFPLAVEVIKNGHQHLFKHFEDK----GYQPTMRKTENGD-LFHTDNDNY 172
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
I+D I DP+ ++ EL ++ GV+EHGLF+ M + ++ DGE
Sbjct: 173 IIDLHLEVIEDPKALADELIHLVGVVEHGLFLGMTEDVLLA-QDGEV 218
>gi|15603535|ref|NP_246609.1| ribose-5-phosphate isomerase A [Pasteurella multocida subsp.
multocida str. Pm70]
gi|13431848|sp|P57961|RPIA_PASMU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|12722077|gb|AAK03754.1| RpiA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 219
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 119/230 (51%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AA A+QYV +G+G+GST F+ L + +S+ +E
Sbjct: 1 MDQLEMKKMAAAAALQYVKPDSIIGVGSGSTVNCFIEALGSM--RDQIKGAVAASKASEA 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
I + S +VSS+D+ +DG DEI+ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLAKQGIEVFSANEVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ ++ G + E R V+D GN
Sbjct: 119 TSKQVDVLGSTFALPVEVIPMARSQVARK----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D + I +P + EL N+PGV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVYHFAIMNPVEMEKELNNVPGVVTNGIFALRAADIIIVGTPEGAKVI 218
>gi|260913237|ref|ZP_05919719.1| ribose 5-phosphate isomerase [Pasteurella dagmatis ATCC 43325]
gi|260632824|gb|EEX50993.1| ribose 5-phosphate isomerase [Pasteurella dagmatis ATCC 43325]
Length = 219
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD L+MK+ AA+ A++YV +G+G+GST F+ L + +S+ +E
Sbjct: 1 MDQLEMKKQAAKAALKYVKPDTIVGVGSGSTVNCFIEALGAM--KNEIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + S +VSS+D+ +DG DE++ + +IKG G AL REKI+A A +FI I D
Sbjct: 59 LLRKQGIEVFSANEVSSLDIYVDGADEVNPQKMMIKGGGAALTREKIVAALAKKFICIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+SK+VD LP+E+ ++ G + E R V+D GN
Sbjct: 119 KSKQVDVLGSTFALPVEVIPMARSQVARK----LVSLGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D + I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 169 ILDVYNFAIMNPVEMEKELNNVAGVVTNGIFALRAADIIIVGTPEGAKII 218
>gi|254284420|ref|ZP_04959388.1| ribose 5-phosphate isomerase A [gamma proteobacterium NOR51-B]
gi|219680623|gb|EED36972.1| ribose 5-phosphate isomerase A [gamma proteobacterium NOR51-B]
Length = 223
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 83/230 (36%), Positives = 115/230 (50%), Gaps = 17/230 (7%)
Query: 1 MDALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
MD Q+K A AI+ D + LG+GTGSTA+ F+ LL A + SS
Sbjct: 1 MDKAQLKAQVAAAAIERVAALHNDDLVLGIGTGSTAEAFIQLLGPLRAR--IDTTVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + +IP+ V VD+ +DG DE ++ L+LIKG G AL REKI+A A+ +FI
Sbjct: 59 RSSTLLREMNIPVSDLNAVGEVDIYVDGADEANADLQLIKGGGAALTREKIVAGASRQFI 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK V LG LP+E+ + G R V+D
Sbjct: 119 CIADESKLVPTLGAFPLPVEVIPMARSYVARQ----IVALGGQPVWR------EDVVTDN 168
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGE 225
GN I+D F I P + G+L +IPGV+ +GLF + D ++GT DG
Sbjct: 169 GNVILDVFNLLIDQPLTLEGQLNDIPGVVCNGLFALRAADELLLGTPDGV 218
>gi|328702186|ref|XP_001949041.2| PREDICTED: ribose-5-phosphate isomerase-like [Acyrthosiphon pisum]
gi|239790938|dbj|BAH71998.1| ACYPI009666 [Acyrthosiphon pisum]
Length = 283
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 10/232 (4%)
Query: 7 KRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKI 64
K AA RAI +V DGM LG+G+GST + LA + V +P+S
Sbjct: 48 KMCAAHRAIDKHVKDGMILGIGSGSTIVYGVQRLAQRTKDENLSVVCVPTSYQARQLIID 107
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + L + + +D +IDG DEI+ L IKG GG L +EKI+A + + I++ D +K
Sbjct: 108 YKLTLGNLDTHPKIDCTIDGADEIEKGTLTCIKGGGGCLTQEKIVASCSEKLIIVADGAK 167
Query: 124 RVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
VD L + +PIE+ +++ +G LR+ + +G V+D GN++
Sbjct: 168 EVDHLGQKWKKGIPIEVIPMSCKPI---QQKIEGKYGGEAILRMSADKAGPLVTDNGNFL 224
Query: 181 VDAFFGFIPD-PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D F + L IPGV+E GLFI+M D ++G S G L+K
Sbjct: 225 LDWVFPETKYCWSSVHNYLKLIPGVVETGLFIDMTDECLVGDSQGNVRQLKK 276
>gi|257051917|ref|YP_003129750.1| ribose 5-phosphate isomerase [Halorhabdus utahensis DSM 12940]
gi|256690680|gb|ACV11017.1| ribose 5-phosphate isomerase [Halorhabdus utahensis DSM 12940]
Length = 228
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 10/231 (4%)
Query: 1 MDA---LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
MD KR A+ A++ V DG +G+G+GSTA+ + +L D++ G + + +S
Sbjct: 1 MDEQTRDAAKRRASESAVEAVSDGDVVGLGSGSTAEHAIRILGDRVEEGLDIVGVTTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVS-SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
I L + ++ +D++IDG D+ LIKG G A REKI+A A
Sbjct: 61 AREIAIEKGIDLTTLDETDGHIDVTIDGADQFAGS-DLIKGGGAAHAREKIVASATDSLQ 119
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
++ D +K D L ++P+E+ +A++E G ELR + SG V+D
Sbjct: 120 IVADPTKETDVLDT-VVPVEVLPDARTTVANAIRE----LGGEPELRWAKRKSGPVVTDN 174
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GN + DA FG I DP+ ++ E+ IP V+EHG+F D +GT DG +
Sbjct: 175 GNLLFDADFGAIDDPETLATEIATIPSVVEHGIFPGYADAVHMGTEDGVTV 225
>gi|224477317|ref|YP_002634923.1| ribose-5-phosphate isomerase A [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421924|emb|CAL28738.1| ribose 5-phosphate isomerase A [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 227
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 7/232 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD ++K A+ + DGM +G+GTGST + + +A + +G ++ + +S T
Sbjct: 1 MDIKELKLKTVDDAVTEIKDGMIVGIGTGSTIELLLPKIAALLNDGTQITGVCTSNKTAL 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +D++IDG DE DS L LIKG GGAL REK+I A RF+VI D
Sbjct: 61 IAKELGIKIVDVNDVDYIDVAIDGADEFDSDLNLIKGGGGALFREKVIDDMAERFVVIAD 120
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K VD LP+E+D+F + + + R FV+D GNY
Sbjct: 121 ETKFVDYLGQTFKLPVEVDKFNWLLVSKKITKDT-----QAVVSRRNVEDIPFVTDNGNY 175
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D +P + L ++ GV+E G F+++ D I+GT +G +L K
Sbjct: 176 ILDVELLPHTNPYEMHEYLIHLTGVLETGYFLDVTDRVIVGTKEG-VKILDK 226
>gi|170749106|ref|YP_001755366.1| ribose 5-phosphate isomerase [Methylobacterium radiotolerans JCM
2831]
gi|238688886|sp|B1M272|RPIA_METRJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|170655628|gb|ACB24683.1| ribose 5-phosphate isomerase [Methylobacterium radiotolerans JCM
2831]
Length = 237
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 87/196 (44%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Query: 18 VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
V GM LG+GTGSTA F+ LL +++ G + +P+S T + I L + ++
Sbjct: 18 VEPGMRLGLGTGSTAAAFVALLGERVRAGLDIVGVPTSEATRAQAESLGIRLATLDEQPE 77
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEI 137
+DL+IDG DE+D RLRLIKG G ALLREKI+A A+ R +VI D +K V LG LP+E+
Sbjct: 78 LDLTIDGADEVDDRLRLIKGGGAALLREKIVACASRRMVVIADAAKHVARLGAFPLPVEV 137
Query: 138 DQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-LFVSDGGNYIVDAFFGFIPDPQIISG 196
+ FG+ T A++ + G + ++RLR G V+DGG+YI+DA G IPDP+ +
Sbjct: 138 NPFGLKATHRAVEAAVAGAGCSGDVRLRAQADGKPLVTDGGHYILDARLGAIPDPEALGA 197
Query: 197 ELCNIPGVIEHGLFIN 212
L +PGV+EHGLF+
Sbjct: 198 ALWAVPGVVEHGLFLG 213
>gi|254582611|ref|XP_002499037.1| ZYRO0E02068p [Zygosaccharomyces rouxii]
gi|238942611|emb|CAR30782.1| ZYRO0E02068p [Zygosaccharomyces rouxii]
Length = 301
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 20/244 (8%)
Query: 4 LQMKRNAARRAIQYVVD---GMTLGMGTGSTAKEFMILLADKIANG------FRVQVIPS 54
KR AA RA+ +D +G+G+GST + + + + + + +
Sbjct: 48 ENAKRAAAYRAVDENLDVYQHRVIGIGSGSTVIYVAERIGQYLRDDEYRDYVSKFKCVAT 107
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
++ + + E +D++ DG DEID L LIKG GG L +EK+I+ +A
Sbjct: 108 GYQSKQLIMDNGLTYAILEQHPHIDIAFDGADEIDCNLDLIKGGGGCLFQEKLISTSAKI 167
Query: 115 FIVIGDESKRVDFLGRGM----LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS- 169
F+V+ D SK+ +PIE+ N+ ++ + LR+ G
Sbjct: 168 FVVVADTSKKSPRRLGSHWVQGVPIEVVPAAYNRV----QDDLLNLLGAKTATLRQGGKV 223
Query: 170 --GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
G V+D N+I+D FG I DP+ + + + GV+E GLFI A +G+ DG+ L
Sbjct: 224 KMGPVVTDNNNFILDTHFGDIDDPKKLHDNIKALVGVVETGLFIGNAAKAYLGSPDGDVL 283
Query: 228 VLQK 231
+ +
Sbjct: 284 ITSR 287
>gi|328853321|gb|EGG02460.1| hypothetical protein MELLADRAFT_78765 [Melampsora larici-populina
98AG31]
Length = 324
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 11/236 (4%)
Query: 4 LQMKRNAARRAIQ-YVVDGM-TLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
K+ AA A+ +++ +G+G+G+T + + + + IP+ ++
Sbjct: 47 EAAKQLAAYVAVDEHILPHHRVIGIGSGTTVPYVVERIVQQGSEANESRWFIPTGFQSKE 106
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ L + S+D+++DG DE+D+ L IKG G LREK++A AA F+++ D
Sbjct: 107 LIVKAGLNLGDVDQFPSLDITLDGADEVDADLNAIKGGGACHLREKVLAEAAETFVLVAD 166
Query: 121 ESKRVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K L +G +PIE+ F K + ++++ + LR+ ++ +G V+D G
Sbjct: 167 ARKDSGVLGSKWKGGVPIEVVPFAWAKVIRNIQKMGCP---DASLRMGKSKAGPVVTDNG 223
Query: 178 NYIVDAFFGFI--PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+++DA F + DP + L + GV+E GLF M A G DG + +
Sbjct: 224 NFVIDAPFDEVYMRDPMELGYRLKMLTGVLEVGLFCGMAQDAYFGNPDGSVTIRSR 279
>gi|88811644|ref|ZP_01126898.1| Ribose 5-phosphate epimerase [Nitrococcus mobilis Nb-231]
gi|88791035|gb|EAR22148.1| Ribose 5-phosphate epimerase [Nitrococcus mobilis Nb-231]
Length = 220
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + Q K+ AA A+ ++ +G+GTGST F+ L G V+ SS +
Sbjct: 1 MASDQQKKAAAEAALSHLQHANIVGIGTGSTVNFFIDAL--TSIKGSIDAVVSSSEASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ H + V + + +DG DEI+ L++IKG GGAL REKIIA + RFI I D
Sbjct: 59 RLRRHGFEVRELNAVDEIPVYVDGADEINRYLQMIKGGGGALTREKIIAAVSRRFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SKRVD LG LP+E+ + + + G LR F +D GN I
Sbjct: 119 ASKRVDVLGGFPLPVEVIPMARSYVAREMVK----LGGWPALREG------FATDNGNLI 168
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
+D I +P + + NIPGV+ G+F + D ++GT G +
Sbjct: 169 LDVRNLQIMEPSHMEQTINNIPGVVTVGIFALRPADMLLLGTDQGVETL 217
>gi|70725721|ref|YP_252635.1| ribose-5-phosphate isomerase A [Staphylococcus haemolyticus
JCSC1435]
gi|123660928|sp|Q4L8J6|RPIA_STAHJ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|68446445|dbj|BAE04029.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 230
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D+ ++K A+ + D M LG+GTGST + + LA++I + + +S +
Sbjct: 3 DSKELKIMTVDDAVAQIEDNMVLGIGTGSTIELLIPKLAERIHKEQLNITGVCTSNKSAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV VDL+IDG DE+D + LIKG GGAL REK+I A RF+V+ D
Sbjct: 63 IAKKLDINVVDINDVGHVDLAIDGADEVDVNINLIKGGGGALFREKVIDEMAHRFVVLAD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
ESK V+ LP+E+D+F ++ R + F++D GNY
Sbjct: 123 ESKLVNYLGESFKLPVEVDKFNWFHIAKKIEAFDDIITER-----RMSDDVPFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP L ++ GV+E G F+N+ D I+GT DG ++ K
Sbjct: 178 ILDCQLNKQIDPYQFHEYLIHLTGVLETGYFLNITDQVIVGTQDG-VKIINK 228
>gi|307719346|ref|YP_003874878.1| ribose 5-phosphate isomerase A [Spirochaeta thermophila DSM 6192]
gi|306533071|gb|ADN02605.1| ribose 5-phosphate isomerase A [Spirochaeta thermophila DSM 6192]
Length = 229
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 6 MKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFC 62
MKR A A+ +V DGM +G+GTGSTA + + + + G + + +S +E
Sbjct: 1 MKRRVAFHAVDTHVKDGMRVGLGTGSTAVWAIRRIGEHMREGRLSGIVGVATSFASEMEA 60
Query: 63 KIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+ S D VDL+IDG DE+D L L+KG GGAL REK++A+ A RF+V+
Sbjct: 61 HRLGIPVRSLNDPEIGGEVDLAIDGADEVDPTLHLVKGGGGALFREKLVAYNARRFVVVV 120
Query: 120 DESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+E K V +G +P+E+ L A G +R G V+D GN
Sbjct: 121 EECKLVPHIGTGFPIPVEVVPEARACVLKA----LEALGAEWTIRHGSGKQGPVVTDNGN 176
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+VD F DP+ + L IPGV E G F + +G GE L
Sbjct: 177 LLVDVRFPAPVDPEEMEIRLGLIPGVYETGFFTRIRPTVCVGLPSGEVRTL 227
>gi|319893288|ref|YP_004150163.1| Ribose 5-phosphate isomerase A [Staphylococcus pseudintermedius
HKU10-03]
gi|317162984|gb|ADV06527.1| Ribose 5-phosphate isomerase A [Staphylococcus pseudintermedius
HKU10-03]
gi|323463666|gb|ADX75819.1| ribose 5-phosphate isomerase A [Staphylococcus pseudintermedius
ED99]
Length = 231
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 7/230 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
M Q+K A+ + DGMT+G+GTGST + + +A I G+++ + +S TE
Sbjct: 1 MSNKQLKLMTLDEAVSRIEDGMTVGIGTGSTVELLVPKIAGLIHEKGYQLIGVCTSERTE 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
N K +IP+ DV +D++IDG DEID +L LIKG GGAL REK++ A RFIVI
Sbjct: 61 NQAKSLNIPIAHINDVQHIDIAIDGADEIDPKLNLIKGGGGALFREKVVDTFADRFIVIA 120
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD LP+E+D+F + +++ E+ R F++D GN
Sbjct: 121 DQSKLVDYLGQTFKLPVEVDRFNWKQVAQLIEKKYEI-----EVTRRMMEHTPFITDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
YI+D DP + L ++ GV+E G F++ V+ AI+GT G L+
Sbjct: 176 YILDCALNREIDPYQVHEFLIHLVGVLETGYFLDTVEEAIVGTEQGVKLI 225
>gi|304321261|ref|YP_003854904.1| ribose-5-phosphate isomerase A [Parvularcula bermudensis HTCC2503]
gi|303300163|gb|ADM09762.1| ribose-5-phosphate isomerase A [Parvularcula bermudensis HTCC2503]
Length = 228
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 130/228 (57%), Gaps = 5/228 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M K+ AA A+ +V GMTLG+GTGSTA F+ LL D+ GF Q IP+S T
Sbjct: 1 MS-DDKKQRAAAAALAHVRPGMTLGLGTGSTAAHFVKLLGDQ---GFEGQAIPTSEETAR 56
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I L +P++ + +DL++DG DE D LIKG GGALLREKIIA A FIVI D
Sbjct: 57 LAEAVGISLITPDETTRIDLAVDGADEADPSGALIKGGGGALLREKIIAQQAQTFIVIAD 116
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGL-NEELRLRRNGSGLFVSDGGNY 179
+ K V LG+ LP+E+ F V T+ A++ + G + L LRR G F +DGG+
Sbjct: 117 DGKDVVQLGQFPLPVEVTGFAVGLTIQAIRSTLAALGYEDPSLTLRRGEGGFFQTDGGHL 176
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
IVD G I + + + L IPGV+ GLF+ + D I GT G
Sbjct: 177 IVDIALGRIDEAEPLDAALTMIPGVVTTGLFVGLTDLMIFGTESGVRE 224
>gi|315186724|gb|EFU20482.1| ribose-5-phosphate isomerase [Spirochaeta thermophila DSM 6578]
Length = 229
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 6 MKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFC 62
MKR A A+ +V DGM +G+GTGSTA + + + + G + + +S +E
Sbjct: 1 MKRRVAFHAVDTHVKDGMRVGLGTGSTAVWAIRRIGEHMREGRLSGIVGVATSFASEMEA 60
Query: 63 KIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
IP+ S D VDL+IDG DE+D L L+KG GGAL REK++A+ A RF+V+
Sbjct: 61 HRLGIPVRSLNDPEIGGEVDLAIDGADEVDPALHLVKGGGGALFREKLVAYNARRFVVVV 120
Query: 120 DESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+E K V +G +P+E+ L A G +R G V+D GN
Sbjct: 121 EECKLVPHIGTGFPIPVEVVPEARACVLKA----LEALGAEWTIRHGSGKQGPVVTDNGN 176
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+VD F DP+ + L IPGV E G F + +G GE L
Sbjct: 177 LLVDVRFPSPVDPEEMEIRLGLIPGVYETGFFTRIRPTVCVGLPSGEVRTL 227
>gi|242371987|ref|ZP_04817561.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis M23864:W1]
gi|242350294|gb|EES41895.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis M23864:W1]
Length = 229
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 82/232 (35%), Positives = 126/232 (54%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D ++K I + DGMTLG+GTGST + + +A+ + + + + + +S T
Sbjct: 3 DVKELKLMTLDDVISQIEDGMTLGIGTGSTIELLVPRIAELVHQHHYDITGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV+ +DL+IDG DE+D L LIKG GGAL REK+I A RF+VI D
Sbjct: 63 LAKELDIKIVEVNDVNHIDLAIDGADEVDPNLNLIKGGGGALFREKVIDEMAERFVVIAD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K VD +LP+E+D+F + ++++ ++ R N F +D GNY
Sbjct: 123 ENKLVDYLGQTFVLPVEVDKFNWYQVAKRIEDIQ-----GVKVNRRVNEDVPFTTDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP + L ++ GV+E G F++M D I+GT DG ++ K
Sbjct: 178 ILDCTLPEGIDPYDMHEFLIHLTGVLETGYFLDMTDQVIVGTQDG-VKIMNK 228
>gi|297182694|gb|ADI18850.1| ribose 5-phosphate isomerase [uncultured Pseudomonadales bacterium
HF0010_05E14]
Length = 229
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 114/227 (50%), Gaps = 18/227 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDG----MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K AR A+ Y++ LG+GTGST F+ L+A + + SS
Sbjct: 1 MSQNKLKALCARAALDYILPKLHGRTILGIGTGSTTNLFIELMAQEKIR--LKGAVASSI 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
T+ + H I + ++V S++L IDG DE +S L L+KG GGAL +EKI+A A+ F+
Sbjct: 59 ATKKLLEKHEIKVFKLDEVDSLELYIDGADESNSNLELVKGGGGALTQEKIVAAASKEFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D +K V LG LPIE+ + +KE G + E R ++D
Sbjct: 119 CIIDHTKWVSNLGEFPLPIEVIPTSIKYVSKEIKE----MGGDPEHRKG------VITDN 168
Query: 177 GNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGT 221
GN I+D I P+ I +L NI GV+ +G+F + D + +
Sbjct: 169 GNLIIDVKGLYPISKPKSIEKDLNNIAGVVTNGIFALRPADKIFVAS 215
>gi|300691789|ref|YP_003752784.1| ribose-5-phosphate isomerase A (phosphoriboisomerase A) (PRI)
[Ralstonia solanacearum PSI07]
gi|299078849|emb|CBJ51510.1| Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI)
[Ralstonia solanacearum PSI07]
Length = 228
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 12/230 (5%)
Query: 1 MDALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
M ++K A+ A YV +G LG+GTGSTA F+ ++A A + SS
Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDVMAPHKARFA--GAVSSSE 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H + +V ++ + +DG DEID +IKG GGAL REKI+A A +F+
Sbjct: 59 ASTRRLQGHGFTVLDLNEVDAIPVYVDGADEIDDTGAMIKGGGGALTREKIVASVAGQFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I D SK V LG LP+E+ A+ + G LR+ + G ++ +D
Sbjct: 119 CIADGSKLVGVLGAFPLPVEVVPMARA----AVARRLAALGGQPRLRMTKEG-QIYQTDN 173
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
GN I+D I +P+ + ++ +IPGV+ GLF + ++GT G
Sbjct: 174 GNVILDVTGLRIGEPKTLEAQVNDIPGVVTVGLFAKRGANVLLLGTEAGV 223
>gi|223590059|sp|A5DFH6|RPIA_PICGU RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|190345952|gb|EDK37929.2| hypothetical protein PGUG_02027 [Meyerozyma guilliermondii ATCC
6260]
Length = 247
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 15/235 (6%)
Query: 6 MKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR AA +A+ + +G+G+GST + + N I + ++
Sbjct: 19 AKRMAAYKAVDANFPPHAKVVGIGSGSTVVYVAERIGQ-LKNKHDFVCISTGFQSKQLII 77
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + L + E VD++ DG DE+D+ L LIKG G L +EK++A +A +FIV+ D K
Sbjct: 78 DNGLTLGAIEQFPKVDIAFDGADEVDTNLNLIKGGGACLFQEKLVASSADKFIVVADTRK 137
Query: 124 RVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS---GLFVSDG 176
+ R +PIE+ LKE+ + + LR+ G G V+D
Sbjct: 138 KSPSDLGIAWRKGVPIEVVPNSYAVVTRQLKELGAK-----SVVLRQGGGAKAGPVVTDN 192
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+++DA FG I DP + ++ + GV+E GLF++M A G GE +
Sbjct: 193 NNFLIDADFGSISDPGSLHQQIKLLVGVVETGLFVDMAHTAYFGDESGEVSEQSR 247
>gi|221057061|ref|XP_002259668.1| ribose 5-phosphate epimerase [Plasmodium knowlesi strain H]
gi|193809740|emb|CAQ40442.1| ribose 5-phosphate epimerase, putative [Plasmodium knowlesi strain
H]
Length = 237
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 135/234 (57%), Gaps = 8/234 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
+KR A +A+ YV MT+G+GTG+T + + + + NG V IP+S +TE
Sbjct: 2 DDLKRRVAYKAVDDYVQSNMTIGLGTGTTVFYVLERIENLMRNGKIKDVVCIPTSIDTEI 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + E S +D++IDG DEID L L+KG GGAL+REK++A AS I+I D
Sbjct: 62 KAQKLGIPLTTLEKNSHIDIAIDGADEIDMDLNLVKGRGGALVREKLVASCASFLIIIAD 121
Query: 121 ESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
ESK +G +PIEI FG K + +L +++S N + LR+ ++++D N
Sbjct: 122 ESKLCTNGLGTKGSVPIEILSFGHEKIIQSLLKISSLK--NCKYNLRQKNGEVYITDNKN 179
Query: 179 YIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YIVD +F I D + ++ I GV++HG+F+NM A+I DG L L K
Sbjct: 180 YIVDFYFSNPIQDLRDTCDKIKMITGVVDHGIFVNMTSVALISKQDGTVLKLDK 233
>gi|162146122|ref|YP_001600580.1| ribose-5-phosphate isomerase A [Gluconacetobacter diazotrophicus
PAl 5]
gi|209544495|ref|YP_002276724.1| ribose 5-phosphate isomerase [Gluconacetobacter diazotrophicus PAl
5]
gi|161784696|emb|CAP54235.1| Ribose-5-phosphate isomerase A [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532172|gb|ACI52109.1| ribose 5-phosphate isomerase [Gluconacetobacter diazotrophicus PAl
5]
Length = 234
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 126/227 (55%), Gaps = 7/227 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR AA A V DGM +G+G+GST+ + L + A G R IP+S ++ +
Sbjct: 11 ELKRMAAEEAAAMVQDGMAVGLGSGSTSAMMIDALGRRWAEGLRFVAIPTSEHSAEQARA 70
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H I L + +D++IDG DE++ L L+KG GGAL REKI+A AA RFI++ DESK
Sbjct: 71 HGITLVTFATHPQLDMAIDGADEVERGSLNLVKGLGGALFREKIVASAAKRFIIVVDESK 130
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD R +P+E+ FG T G R+ RNG GLFV+DGGN I+D
Sbjct: 131 LVDHLGSRVAVPVEVTSFGWESTARQ----LGELGARVSQRMDRNG-GLFVTDGGNMILD 185
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
FG I DP ++ ++ I GVIE GLFI I+ G ++
Sbjct: 186 CAFGPIADPPQLAADIRAIVGVIESGLFIRRTSEVIVAGRSGLTRLV 232
>gi|282850994|ref|ZP_06260368.1| ribose 5-phosphate isomerase A [Lactobacillus gasseri 224-1]
gi|282557946|gb|EFB63534.1| ribose 5-phosphate isomerase A [Lactobacillus gasseri 224-1]
Length = 214
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIA--NGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
V G LG+GTGST F+ L ++ N ++ +S ++ + + D
Sbjct: 2 MVESGSVLGVGTGSTVAFFIDALGERKEKENFSLKHIVTTSNRSKKQLEGLGFQVDELAD 61
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D +D L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 62 IDQADLTVDGADRVDDNLDGIKGGGGALTLEKNVAINSKKVIWIVDESKLVHHLSGFPLP 121
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + +E GL + RL NG +V+ GNYI+D P P +
Sbjct: 122 VEVLPVSAEQNFKRFEEE----GLKPQWRLDDNGK-RYVTHYGNYIIDLAADPTPVPHGL 176
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG ++
Sbjct: 177 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKR 213
>gi|227890351|ref|ZP_04008156.1| ribose 5-phosphate isomerase A [Lactobacillus johnsonii ATCC 33200]
gi|268319137|ref|YP_003292793.1| ribose 5-phosphate isomerase A [Lactobacillus johnsonii FI9785]
gi|227849165|gb|EEJ59251.1| ribose 5-phosphate isomerase A [Lactobacillus johnsonii ATCC 33200]
gi|262397512|emb|CAX66526.1| ribose 5-phosphate isomerase A [Lactobacillus johnsonii FI9785]
Length = 232
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V LG+GTGST F+ L ++ GF ++ ++ +S ++ + + D
Sbjct: 20 MVEPNSVLGVGTGSTVAFFIDALGERKEKEGFSLKHIVTTSNRSKKQLEGLGFKVDELAD 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D +D L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 80 IDQADLTVDGADRVDDNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHHLSGFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + + GL + RL G +V+ GNYI+D P P +
Sbjct: 140 VEVLP----VSAEQNFKRFEAEGLKPQWRLDDEGK-RYVTHYGNYIIDLATDPTPVPHGL 194
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG ++
Sbjct: 195 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKR 231
>gi|319955016|ref|YP_004166283.1| ribose-5-phosphate isomerase a [Cellulophaga algicola DSM 14237]
gi|319423676|gb|ADV50785.1| Ribose-5-phosphate isomerase A [Cellulophaga algicola DSM 14237]
Length = 244
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 128/229 (55%), Gaps = 9/229 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M+++ K AA A++++ + MT+G+GTGSTA + L ++I G + +P+S TE
Sbjct: 1 MNSISEKELAAIEAVKFIKNNMTIGLGTGSTAAYMITHLGERIKKEGLIIYGVPTSEATE 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
F + I + S E+V +D++IDG DE D+ L+LIKG GGALLREKIIA + I+I
Sbjct: 61 KFALKNGIKILSLEEVKKIDITIDGADEFDTYLQLIKGGGGALLREKIIASNSEFNIIIA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D K+V LG LPIE F K L + + LR+ G +F +D NY
Sbjct: 121 DSGKQVSRLGAFRLPIETVPFATKKIADQLHQKGL------DPILRKKGETVFSTDEKNY 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+D + + ++ EL IPG++E GLF+ D ++G G ++
Sbjct: 175 ILDVNILPFYNLESLNQELIAIPGIVETGLFLTTTDLVLMGK--GSKVI 221
>gi|299532221|ref|ZP_07045615.1| ribose-5-phosphate isomerase A [Comamonas testosteroni S44]
gi|298719883|gb|EFI60846.1| ribose-5-phosphate isomerase A [Comamonas testosteroni S44]
Length = 217
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
+ A++YVV G +G+GTGST +F+ LA I + V S +TE + I
Sbjct: 1 MVGQAALKYVVAGEIVGVGTGSTVNKFIDALA-TIKDQIPGAVSSSVASTERLKAL-GIK 58
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL 128
+ +V+S+ + IDG DEID + ++KG G AL REKI+A A RF+ I DESKRV L
Sbjct: 59 VFDANEVTSLAVYIDGADEIDGKGYMVKGGGAALTREKIVAALAQRFVCIADESKRVQVL 118
Query: 129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFI 188
G LP+E+ + + G + ++R V+D G +I+D I
Sbjct: 119 GNFPLPVEVIPMAAAQIARRFE----AMGADVTAQIRMKDGSPLVTDNGQHILDVRGLKI 174
Query: 189 PDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
+P E+ PGV+ G+F + ++GT+ G +
Sbjct: 175 AEPLAFESEVNQWPGVVTVGVFAHQKAAVCLLGTAQGVQTL 215
>gi|15617013|ref|NP_240226.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681765|ref|YP_002468151.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682320|ref|YP_002468704.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471467|ref|ZP_05635466.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387081|sp|P57489|RPIA_BUCAI RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808702|sp|B8D9J2|RPIA_BUCA5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808703|sp|B8D7U4|RPIA_BUCAT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|25329393|pir||H84977 ribose-5-phosphate isomerase (EC 5.3.1.6) [imported] - Buchnera sp.
(strain APS)
gi|10039078|dbj|BAB13112.1| ribose 5-phosphate isomerase A [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622053|gb|ACL30209.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624608|gb|ACL30763.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311087304|gb|ADP67384.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 223
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 13/217 (5%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y+ G +G+GTG+T F+ L + SS ++ K H I + ++
Sbjct: 16 DYIDPGTIIGVGTGTTIFYFIEALGT--IKNLIYGAVSSSNSSTVLLKKHGIEVFDLKNF 73
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
SS+ + +D DEI++ +++IKG GGAL REKIIA + +F+ I D+SK+VD LG LPI
Sbjct: 74 SSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLGTFPLPI 133
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
EI ++ + + G + R ++D GN I+D + I DP +
Sbjct: 134 EIIPMALSYIFREMIK----IGGTPKYRKN------VITDNGNIIIDVYNLCIKDPISME 183
Query: 196 GELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
++ ++PGV+ GLF + D +IGT G + +K
Sbjct: 184 KKINSLPGVVTVGLFASRSADIVLIGTQKGIRTINKK 220
>gi|42518723|ref|NP_964653.1| ribose 5-phosphate isomerase A [Lactobacillus johnsonii NCC 533]
gi|67461481|sp|Q74KF3|RPIA_LACJO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|41583009|gb|AAS08619.1| ribose 5-phosphate isomerase A [Lactobacillus johnsonii NCC 533]
Length = 232
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V LG+GTGST F+ L ++ GF ++ ++ +S ++ + + D
Sbjct: 20 MVEPNSVLGVGTGSTVAFFIDALGERKEREGFSLKHIVTTSNRSKKQLEGLGFKVDELAD 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D +D L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 80 IDQADLTVDGADRVDDNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHHLSGFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + + GL + RL G +V+ GNYI+D P P +
Sbjct: 140 VEVLP----VSAEQNFKRFEAEGLKPQWRLNDEGK-RYVTHYGNYIIDLAADPTPVPHGL 194
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG ++
Sbjct: 195 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKR 231
>gi|329666988|gb|AEB92936.1| ribose 5-phosphate isomerase A [Lactobacillus johnsonii DPC 6026]
Length = 232
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V LG+GTGST F+ L ++ GF ++ ++ +S ++ + + D
Sbjct: 20 MVEPNSVLGVGTGSTVAFFIDALGERKEKEGFSLKHIVTTSNRSKKQLEGLGFKVDELAD 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D +D L IKG GGAL EK +A + + I I DESK V L LP
Sbjct: 80 IDQADLTVDGADRVDDNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHHLSGFPLP 139
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + + GL + RL G +V+ GNYI+D P P +
Sbjct: 140 VEVLP----VSAEQNFKRFEAEGLKPQWRLDDEGK-RYVTHYGNYIIDLAADPTPVPHGL 194
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ L + GV+EHGLF++M D II SDG +K
Sbjct: 195 ADYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIEDKKK 231
>gi|170016933|ref|YP_001727852.1| ribose 5-phosphate isomerase A [Leuconostoc citreum KM20]
gi|169803790|gb|ACA82408.1| Ribose 5-phosphate isomerase A [Leuconostoc citreum KM20]
Length = 255
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 76/210 (36%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
V DGMT+G+GTGST F+ LA+++ + + +S T + K I + +
Sbjct: 39 LVKDGMTVGLGTGSTIAFFLDALAERVQHEKLNIIGVTTSFKTADRAKELGIQIQDIDSA 98
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+DL+IDG DE+D+ L IKG G A L EKI+A + R + I D K D LG+ LP+
Sbjct: 99 PMIDLTIDGADEVDTELNGIKGGGAAFLMEKIVAKNSKRVVWIVDSLKVHDKLGQFPLPV 158
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ FG K ++ ++ L +LR +G V+D G+YIVD I P +S
Sbjct: 159 EVVPFGSGKLITEFEQ----HHLYPKLRTGADG-QPVVTDMGHYIVDLDLQVIDQPYELS 213
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGE 225
L GV+EHGLF+++ D I+G+ G
Sbjct: 214 RYLDGRIGVVEHGLFLDIADEVIVGSQQGV 243
>gi|146420806|ref|XP_001486356.1| hypothetical protein PGUG_02027 [Meyerozyma guilliermondii ATCC
6260]
Length = 247
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 15/230 (6%)
Query: 6 MKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR AA +A+ + +G+G+GST + + N I + ++
Sbjct: 19 AKRMAAYKAVDANFPPHAKVVGIGSGSTVVYVAERIGQ-LKNKHDFVCISTGFQSKQLII 77
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + L + E VD++ DG DE+D+ L LIKG G L +EK++A +A +FIV+ D K
Sbjct: 78 DNGLTLGAIEQFPKVDIAFDGADEVDTNLNLIKGGGACLFQEKLVASSADKFIVVADTRK 137
Query: 124 RVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS---GLFVSDG 176
+ R +PIE+ LKE+ + + LR+ G G V+D
Sbjct: 138 KSPSDLGIAWRKGVPIEVVPNSYAVVTRQLKELGAK-----SVVLRQGGGAKAGPVVTDN 192
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
N+++DA FG I DP + ++ + GV+E GLF++M A G GE
Sbjct: 193 NNFLIDADFGSISDPGSLHQQIKLLVGVVETGLFVDMAHTAYFGDESGEV 242
>gi|68468427|ref|XP_721773.1| potential ribose-5-phosphate ketol-isomerase [Candida albicans
SC5314]
gi|68468666|ref|XP_721652.1| potential ribose-5-phosphate ketol-isomerase [Candida albicans
SC5314]
gi|74587370|sp|Q5AJ92|RPIA_CANAL RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|46443580|gb|EAL02861.1| potential ribose-5-phosphate ketol-isomerase [Candida albicans
SC5314]
gi|46443710|gb|EAL02990.1| potential ribose-5-phosphate ketol-isomerase [Candida albicans
SC5314]
Length = 263
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
K+ AA +A+ + D +G+G+GST + + N IP+ ++
Sbjct: 30 VESAKKLAAYKAVDENFPKDAKVIGIGSGSTVIYAAERIGQ-LDNKDSFICIPTGFQSKQ 88
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + E +D++ DG DE+D +L LIKG G L +EK++A +A +F+V+ D
Sbjct: 89 LIIDNGLRLGTIEQYPDIDIAFDGADEVDPQLNLIKGGGACLFQEKLVAASAKKFVVVAD 148
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K+ D R +PIEI +K + L + ++ + +G ++D
Sbjct: 149 YRKKSDKLGQSWRQGVPIEIVPNSYSKIIQELSKKLGAKNVDLRQG-GKAKAGPIITDNN 207
Query: 178 NYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+++DA FG I + + ++ + GV+E GLF NM + A G DG V K
Sbjct: 208 NFLLDADFGEIEIDNVGKLHEQIKLLVGVVETGLFTNMANKAYFGEEDGSVSVWSK 263
>gi|297622424|ref|YP_003703858.1| ribose 5-phosphate isomerase [Truepera radiovictrix DSM 17093]
gi|297163604|gb|ADI13315.1| ribose 5-phosphate isomerase [Truepera radiovictrix DSM 17093]
Length = 227
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNT 58
M A K AA A+ +V M LG+GTGSTAK + + ++A G ++ +S T
Sbjct: 1 MSAEAQKEQAAMSAVAHVESKMVLGLGTGSTAKYATLEIGRRLAAGELRDLRAAVTSEAT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IP+ VDL+IDG DE+ L IKG GGALLREKI+ A+RFI+I
Sbjct: 61 GALARSLGIPVIDL-PRGGVDLAIDGMDEVTGTLDAIKGLGGALLREKIVEARAARFILI 119
Query: 119 GDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
GD SKRV R +P+E+ FG L A G LR +G +D G
Sbjct: 120 GDASKRVRYLGERAPVPVEVLPFG----LEAASRDLEALGCRPV--LRLSGGRPVTTDNG 173
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++++D F DPQ ++ + IPGV+ HGLF+ + A + + DG VL++
Sbjct: 174 HHLLDCHFSHPFDPQEVALAISQIPGVLGHGLFLGLAHLAYLASDDG-VDVLER 226
>gi|167626324|ref|YP_001676824.1| ribose-5-phosphate isomerase A [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189043816|sp|B0TY81|RPIA_FRAP2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|167596325|gb|ABZ86323.1| Ribose-5-phosphate isomerase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 224
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ ++K+ AA A +++ + LG+GTGST + L + + + V S +T+
Sbjct: 8 NQDELKKAAAIEAAKHIKSEIVLGVGTGSTVAFLIEELVN-YKDKIKSVVSSSEDSTKKL 66
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + +DL IDG DE ++ LIKG G AL REKI AA +FI I DE
Sbjct: 67 KAL-GFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDE 125
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK+V+ LG LP+E+ + + ++ E+ ++D GN I+
Sbjct: 126 SKKVNTLGEFPLPVEVIPMARSYVAREIVKLGGQPVYREKT----------ITDNGNIIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
D + I +P + EL I GVI +G+F + D I+ DG
Sbjct: 176 DVYNLKIDNPLKLETELNQITGVITNGIFALKPADTVIMAKKDGSIE 222
>gi|325282940|ref|YP_004255481.1| Ribose-5-phosphate isomerase A [Deinococcus proteolyticus MRP]
gi|324314749|gb|ADY25864.1| Ribose-5-phosphate isomerase A [Deinococcus proteolyticus MRP]
Length = 231
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 10/231 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
+ +K+ AA +A+ V G +G+GTGSTAK + L K+ +G + + +S +
Sbjct: 7 NLEALKKEAALKAVALVQSGQRVGLGTGSTAKYAIEELGRKLRDGELSGIVGVATSNASA 66
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + IP+ + +D++IDG DEI L LIKG GGALLREK+ A R I+I
Sbjct: 67 DLAREVGIPVEDLDPRP-LDIAIDGADEIAPNLDLIKGLGGALLREKLTEVQARRLIIIA 125
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D +K V + LPIEI QFG T+ L+E RLR G+ +V+D GN
Sbjct: 126 DHTKIVSRLGEKAPLPIEIAQFGFLSTVERLREFL------PGGRLRMTGASNYVTDNGN 179
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+I DA P + + GV++ GLF+ M + A + DG ++
Sbjct: 180 FIYDAQLPADFAPAELERRIKGTLGVVDTGLFLCMAERAFVAAPDGVQELV 230
>gi|311087814|gb|ADP67893.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 222
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 13/217 (5%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y+ G +G+GTG+T F+ L + SS ++ K H I + ++
Sbjct: 16 DYIDPGTIIGVGTGTTIFYFIEALGT--IKNLIYGAVSSSNSSTVLLKKHGIEVFDLKNF 73
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
SS+ + +D DEI++ +++IKG GGAL REKIIA + +F+ I D+SK+VD LG LPI
Sbjct: 74 SSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLGTFPLPI 133
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
EI ++ + + G + R ++D GN I+D + I DP +
Sbjct: 134 EIIPMALSYIFREIIK----IGGTPKYRKN------VITDNGNIIIDVYNLCIKDPISME 183
Query: 196 GELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
++ ++PGV+ GLF + D +IGT G + +K
Sbjct: 184 KKINSLPGVVTVGLFASRSADIVLIGTQKGIRTINKK 220
>gi|238880578|gb|EEQ44216.1| ribose-5-phosphate isomerase [Candida albicans WO-1]
Length = 240
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
K+ AA +A+ + D +G+G+GST + + N IP+ ++
Sbjct: 7 VESAKKLAAYKAVDENFPKDAKVIGIGSGSTVIYAAERIGQ-LDNKDSFICIPTGFQSKQ 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + E +D++ DG DE+D +L LIKG G L +EK++A +A +F+V+ D
Sbjct: 66 LIIDNGLRLGTIEQYPDIDIAFDGADEVDPQLNLIKGGGACLFQEKLVAASAKKFVVVAD 125
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K+ D R +PIEI +K + L + ++ + +G ++D
Sbjct: 126 YRKKSDKLGQSWRQGVPIEIVPNSYSKIIQELSKKLGAKNVDLRQG-GKAKAGPIITDNN 184
Query: 178 NYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+++DA FG I + + ++ + GV+E GLF NM + A G DG V K
Sbjct: 185 NFLLDADFGEIEIDNVGKLHEQIKLLVGVVETGLFTNMANKAYFGEEDGSVSVWSK 240
>gi|295693447|ref|YP_003602057.1| ribose-5-phosphate isomerase a [Lactobacillus crispatus ST1]
gi|295031553|emb|CBL51032.1| Ribose-5-phosphate isomerase A [Lactobacillus crispatus ST1]
Length = 212
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQ-VIPSSRNTENFCKIHHIPLHSPED 74
V + LG+GTGST F+ L D+ G ++ ++ +S ++ + + +
Sbjct: 1 MVKNNSVLGVGTGSTVAFFIDALGDRKAKEGLSLKHIVTTSNRSKKQLESLGFKVDKLSE 60
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ DL++DG D + L IKG GGAL EK +A + + I I DESK V LG LP
Sbjct: 61 IDQADLTVDGADRVADNLDGIKGGGGALTLEKNVAVNSKKVIWIVDESKLVHRLGDFPLP 120
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ + ++ GL + R+ +G +V+ GNYI+D +P P +
Sbjct: 121 VEVLPISCEQNFKKFEQE----GLKPQWRMAEDGK-RYVTHYGNYIIDLAIDPVPAPHGL 175
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
L + GV+EHGLF++M D II SDG
Sbjct: 176 VDYLDHTVGVVEHGLFLDMCDEVIIAHSDGTIE 208
>gi|124506211|ref|XP_001351703.1| ribose 5-phosphate epimerase, putative [Plasmodium falciparum 3D7]
gi|23504631|emb|CAD51510.1| ribose 5-phosphate epimerase, putative [Plasmodium falciparum 3D7]
Length = 236
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 134/234 (57%), Gaps = 8/234 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
+K+ A +A+ YV MT+G+GTGST + + + + +G V IP+S +TE
Sbjct: 2 DSLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVLERIDNLLKSGKLKDVVCIPTSIDTEL 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + E S++D++IDG DEID L LIKG GGAL+REK++A ++S FI+IGD
Sbjct: 62 KARKLGIPLTTLEKHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLFIIIGD 121
Query: 121 ESKRVDFLG--RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
ESK G +PIEI FG K + L ++ + G ++R R +F++D N
Sbjct: 122 ESKLCTNGLGMTGAVPIEILTFGYEKIIENLLKIYTLKGCTYKIRKR--NGEIFITDNKN 179
Query: 179 YIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YIVD FF I D + GV++HG+F+NM + A+I DG L L K
Sbjct: 180 YIVDFFFTEPIQDLLETCTRIKMTTGVVDHGIFVNMTNVALISKHDGTVLTLNK 233
>gi|307206384|gb|EFN84428.1| Ribose-5-phosphate isomerase [Harpegnathos saltator]
Length = 220
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 8/215 (3%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
+ +G+G+GST + L +++ G V IP+S +H+ L E
Sbjct: 1 QNKTVIGIGSGSTVIYAVHRLVERVKTEGLNVVCIPTSFQARQLIVKNHLTLGDLEIYPE 60
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD---FLGRGMLP 134
+D +IDG DE+D+ + LIKG GG LL+EKI+A A +F+VI D +K + +P
Sbjct: 61 LDCAIDGADEVDAEMNLIKGGGGCLLQEKIVASCAKQFVVIADYTKNSQKLGDQYKKGIP 120
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG-FIPDPQI 193
IE+ + +G + +R+ +G V+D GN+++D F I D
Sbjct: 121 IEVIPMAYKPI---QHRIEVTYGGSANIRMALAKAGPVVTDNGNFVLDWNFPQDITDWNK 177
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I+ E+ IPGV+E GLFINM + A G +DG V
Sbjct: 178 INKEISLIPGVVETGLFINMAEKAFFGMADGSVKV 212
>gi|227510967|ref|ZP_03941016.1| ribose-5-phosphate isomerase A [Lactobacillus buchneri ATCC 11577]
gi|227085709|gb|EEI21021.1| ribose-5-phosphate isomerase A [Lactobacillus buchneri ATCC 11577]
Length = 240
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 7/215 (3%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPED 74
YV DGM +G+G+GST + L ++ G + + +S +T + I + +
Sbjct: 22 DYVKDGMIVGLGSGSTVTMLVDELGRRVQEEGLKFTGVSTSISTAKQAESLGIKIVDLDS 81
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ ++DL+IDG D++DS IKG GG LL EKI+A + + I I D+SK VD +G L
Sbjct: 82 IDTIDLTIDGADQVDSNFNGIKGGGGNLLWEKIVAANSKKLIWIVDKSKVVDRIGAFPLA 141
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
++++ FG + L + G N +R ++G +F +D N I+D I +P +
Sbjct: 142 VDVEPFGSHHVLKKFSDA----GFNPVVRTDKDGK-VFKTDSNNIILDLHLHEINNPDKL 196
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+ L N GV+EHGLF+N V+ ++G G +L
Sbjct: 197 ADTLINTVGVVEHGLFLNAVNEVVVGKE-GAPQIL 230
>gi|325275830|ref|ZP_08141693.1| ribose-5-phosphate isomerase A [Pseudomonas sp. TJI-51]
gi|324099036|gb|EGB97019.1| ribose-5-phosphate isomerase A [Pseudomonas sp. TJI-51]
Length = 201
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81
+G+GTGSTA F+ LA + SS T K H I ++ VS ++
Sbjct: 3 SVVGVGTGSTANFFIDALAQH--KTAFDGAVASSEATAQRLKGHGIAVYELNSVSELEFY 60
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFG 141
+DG DE D+ L LIKG G AL REKI+A A FI I D SK V LG LP+E+
Sbjct: 61 VDGADESDAHLNLIKGGGAALTREKIVAAVAKTFICIADASKLVPVLGAFPLPVEVIPMA 120
Query: 142 VNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNI 201
+ G + R V+D GN I+D + I +P + ++ I
Sbjct: 121 RSHVARQ----LVKLGGDPVYREG------VVTDNGNVILDVYNLQITNPVELEAQINAI 170
Query: 202 PGVIEHGLFINM-VDCAIIGTSDGECLV 228
GV+ +GLF D ++GT++G +
Sbjct: 171 VGVVTNGLFAARPADLLLLGTAEGVKTL 198
>gi|126132948|ref|XP_001382999.1| ribose-5-phosphate ketol-isomerase [Scheffersomyces stipitis CBS
6054]
gi|190360230|sp|A3LP13|RPIA_PICST RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|126094824|gb|ABN64970.1| ribose-5-phosphate ketol-isomerase [Scheffersomyces stipitis CBS
6054]
Length = 237
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 69/236 (29%), Positives = 120/236 (50%), Gaps = 14/236 (5%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
Q K++AA +A+ + V +G+G+GST + +AN IP+ ++
Sbjct: 7 VEQAKKSAAYQAVDENFPVSAKVVGIGSGSTVVYVAERIGQ-LANKDSFVCIPTGFQSKQ 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L + E +D++ DG DE+D L LIKG G L +EK++A +A F+V+ D
Sbjct: 66 LIIDNGLKLGAIEQFPEIDIAFDGADEVDPALNLIKGGGACLFQEKLVAASAKTFVVVAD 125
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG---SGLFVS 174
K+ D + +PIEI K + LK++ + + LR+ G +G ++
Sbjct: 126 YRKKSDNLGIQWKQGVPIEIVPNSYAKVIQDLKKLGAI-----TVNLRQGGSAKAGPIIT 180
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D N+++DA FG I DP+ + ++ + GV+E GLF +M + G DG+ +
Sbjct: 181 DNNNFLLDADFGAIKDPKALHDQIKALVGVVETGLFTSMAAKSYFGEQDGQVNIWS 236
>gi|227510850|ref|ZP_03940899.1| ribose-5-phosphate isomerase A [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227189686|gb|EEI69753.1| ribose-5-phosphate isomerase A [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 240
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/208 (34%), Positives = 111/208 (53%), Gaps = 6/208 (2%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPED 74
YV DGM +G+G+GST + L ++ G + +S +T + I + +
Sbjct: 22 DYVKDGMIVGLGSGSTVTMLVDELGRRVQEDGLNFTAVSTSISTAKQAESLGIKISDLDS 81
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ ++DL+IDG D++DS IKG GG L EKI+A + + I I D+SK VD +G L
Sbjct: 82 IDTIDLTIDGADQVDSDFNGIKGGGGNLFWEKIVAANSKKLIWIVDQSKIVDRIGAFPLA 141
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
++++ FG + L + G N +R +NG +F +D N I+D I DP +
Sbjct: 142 VDVEPFGSHHVLKKFSDA----GFNPVVRTDKNGK-IFKTDSNNIILDLHLHKINDPDKL 196
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTS 222
S L N GV+EHGLF+N V+ ++G
Sbjct: 197 SNALINTVGVVEHGLFLNAVNEVVVGKE 224
>gi|227432382|ref|ZP_03914374.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351903|gb|EEJ42137.1| ribose-5-phosphate isomerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 313
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 8/222 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M+ K++A A + DGM +G+GTGST F+ LA +I + + +S T
Sbjct: 1 MNKQ--KKHAGEFAATLIEDGMVVGLGTGSTIAYFLDALAKRIQDEKMTIIGVTTSTKTA 58
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ I + + V +DL+IDG DE+D L IKG G + L EKI+A + I I
Sbjct: 59 RRAEELGIRIRDIDLVPMIDLTIDGADEVDQHLNGIKGGGASFLMEKIVARYSRLVIWII 118
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
DE K + LG+ LP+E+ FG K ++ LK+ L+ +LRL N V+D G+Y
Sbjct: 119 DEQKLHNKLGQFPLPVEVVAFGSGKLIAELKKR----HLHPKLRL-DNHQQPLVTDLGHY 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
IVD I P + L G++EHGLF+N+ D IIG+
Sbjct: 174 IVDLDLEKIDQPFELGHYLDGQIGIVEHGLFLNVADQVIIGS 215
>gi|332283744|ref|YP_004415655.1| ribose-5-phosphate isomerase A [Pusillimonas sp. T7-7]
gi|330427697|gb|AEC19031.1| ribose-5-phosphate isomerase A [Pusillimonas sp. T7-7]
Length = 226
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 113/234 (48%), Gaps = 17/234 (7%)
Query: 2 DALQMKRNAARRAIQY----VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+N A A+Q+ + + LG+GTGST F+ LA + FR V S R+
Sbjct: 3 TQTELKQNVADAAVQFALPFLAPDVILGVGTGSTVDLFIDALAP-YKDRFRAAVSSSERS 61
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + I + VS + L IDG DE D L +IKG GGAL REKI+A A RF+
Sbjct: 62 SARMASL-GIQVLDLNQVSGMPLYIDGADEFDHALNMIKGGGGALTREKIVASVAQRFVC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESKRV+ LG LP+E+ L E G LR FV+D G
Sbjct: 121 IVDESKRVETLGHFPLPVEVIPMAREVVSRRLVE----LGGTPVLRRD------FVTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQ 230
I+D I P + NIPGV+ GLF + D ++ T +G ++
Sbjct: 171 CQILDVSGLRITAPVETEALINNIPGVVCCGLFALAGADIVLMSTQEGVRQFVK 224
>gi|297521836|ref|ZP_06940222.1| ribose-5-phosphate isomerase A [Escherichia coli OP50]
Length = 186
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + +V S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I D
Sbjct: 59 KLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIAD 118
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK+VD LG+ LP+E+ + G E R V+D GN I
Sbjct: 119 ASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQG------VVTDNGNVI 168
Query: 181 VDAFFGFIPDPQIISGEL 198
+D I DP + +
Sbjct: 169 LDVHGMEILDPIAMENAI 186
>gi|163848737|ref|YP_001636781.1| ribose 5-phosphate isomerase [Chloroflexus aurantiacus J-10-fl]
gi|222526683|ref|YP_002571154.1| ribose 5-phosphate isomerase [Chloroflexus sp. Y-400-fl]
gi|226694668|sp|A9WIA0|RPIA_CHLAA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|254808706|sp|B9LCG3|RPIA_CHLSY RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|163670026|gb|ABY36392.1| ribose 5-phosphate isomerase [Chloroflexus aurantiacus J-10-fl]
gi|222450562|gb|ACM54828.1| ribose 5-phosphate isomerase [Chloroflexus sp. Y-400-fl]
Length = 239
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 8/215 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPED 74
V GM +G+G GSTA ++A+++ G + +P + T + IPL + ++
Sbjct: 20 LVRPGMVIGLGFGSTAAYATRMIAERLHQGDLNDIVGVPCAEGTAQLARELGIPLTTLDE 79
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGML 133
V++VDL+IDG DE+D +L LIKG GGALLREK++A A+ R +I D+SK R L
Sbjct: 80 VAAVDLTIDGADEVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPALGTRFAL 139
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQI 193
P+E+ FG T G +LRLR +G F +D GN I+D G + DP
Sbjct: 140 PLEVVDFGWRATARW----LEAQGGTVQLRLRADG-QPFRTDQGNLILDWKCGPLNDPAA 194
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++ +L G++EHGLFI + + DG V
Sbjct: 195 LAAQLSARAGIVEHGLFIGLATDLFVAGPDGVQHV 229
>gi|149245774|ref|XP_001527364.1| ribose-5-phosphate isomerase [Lodderomyces elongisporus NRRL
YB-4239]
gi|190360228|sp|A5DXV6|RPIA_LODEL RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|146449758|gb|EDK44014.1| ribose-5-phosphate isomerase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 284
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 2 DALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
+ K+ AA RA+ +G+G+GST + + N I + ++
Sbjct: 38 NIEAAKKLAAYRAVDENLPPHAKVIGIGSGSTVVYVAERIGQ-LPNKDDFVCISTGFQSK 96
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + L E S+D++ DG DE+D +L LIKG G L +EK++A A+ + I++
Sbjct: 97 QLIIDNGLKLGQIEQHPSIDIAFDGADEVDPQLNLIKGGGACLFQEKLVASASDKLIIVA 156
Query: 120 DESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG---SGLFV 173
D K+ R +PIE+ K ++ LK + + + LR+ G +G +
Sbjct: 157 DFRKQSKHLGQNWRQGVPIEVVPIAFTKLINDLKRLGAK-----SVDLRQGGKAKAGPVI 211
Query: 174 SDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+D N+I+DA FG I DP+ + +L + GV++ GLF + + G GE
Sbjct: 212 TDNNNFILDADFGIIEDPKSLHLQLKQLVGVVDTGLFTGITEKVYFGEESGEVTTWD 268
>gi|227523158|ref|ZP_03953207.1| ribose-5-phosphate isomerase A [Lactobacillus hilgardii ATCC 8290]
gi|227089632|gb|EEI24944.1| ribose-5-phosphate isomerase A [Lactobacillus hilgardii ATCC 8290]
Length = 240
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 7/215 (3%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPED 74
YV DGM +G+G+GST + L ++ G + + +S +T + I + +
Sbjct: 22 DYVKDGMIVGLGSGSTVTMLVDELGRRVQEKGLKFTGVSTSISTAKQAESLGIKIVDLDS 81
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ ++DL+IDG D++DS IKG GG LL EKI+A + + I I D+SK VD +G L
Sbjct: 82 IDTIDLTIDGADQVDSDFNGIKGGGGNLLWEKIVAANSKKLIWIVDKSKVVDRIGAFPLA 141
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
++++ FG + L + G N +R ++G +F +D N I+D I +P +
Sbjct: 142 VDVEPFGSHHVLKKFSDA----GFNPVVRTDKDGK-VFKTDSNNIILDLHLHEINNPDKL 196
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+ L N GV+EHGLF+N V+ ++G G +L
Sbjct: 197 ADTLINTVGVVEHGLFLNAVNEVVVGKE-GAPQIL 230
>gi|82793318|ref|XP_727992.1| ribose 5-phosphate isomerase [Plasmodium yoelii yoelii str. 17XNL]
gi|23484115|gb|EAA19557.1| ribose 5-phosphate isomerase [Plasmodium yoelii yoelii]
Length = 238
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 90/234 (38%), Positives = 130/234 (55%), Gaps = 8/234 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
+K+ A +A+ YV MT+G+GTGST + + + +G + +P+S +TE
Sbjct: 2 DSLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVIERIDALMKSGKIKNLICVPTSIDTEI 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IPL S +D++IDG DEIDS L LIKG GGAL+REK++A AS FI+I D
Sbjct: 62 KAKSLGIPLTSLTKNLKIDIAIDGADEIDSDLNLIKGRGGALVREKLVAGNASCFIIIVD 121
Query: 121 ESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
ESK + G +PIEI FG + L ++++ N RLR +F++D N
Sbjct: 122 ESKMCEDGLGTTGAVPIEILSFGYEIIIENLLKISALK--NCIYRLREKNGEIFITDNNN 179
Query: 179 YIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YIVD FF I + ++ GVI+HG+F+NM A+I +G L L+K
Sbjct: 180 YIVDFFFDNPIENLAQTCEQIKMTTGVIDHGIFVNMASIALISKINGTILTLKK 233
>gi|315659302|ref|ZP_07912166.1| ribose 5-phosphate isomerase A [Staphylococcus lugdunensis M23590]
gi|315495727|gb|EFU84058.1| ribose 5-phosphate isomerase A [Staphylococcus lugdunensis M23590]
Length = 244
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 122/232 (52%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
D Q+K A+ + D M LG+GTGST + + +ADKI + ++ + +S T
Sbjct: 19 DTKQLKLLTTDDAVAQIKDEMILGIGTGSTIELLIPKIADKIKRDHLTIKGVCTSNKTAI 78
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + D++ +DL+IDG DE+D +L LIKG GGAL REK+I A+RF+V+ D
Sbjct: 79 LAKEQQIDIVDINDITYIDLAIDGADEVDPQLNLIKGGGGALFREKVIDELAARFVVLVD 138
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E K V+ LP+E+D+F + +++ LR F++D GNY
Sbjct: 139 EQKVVNYLGETFRLPVEVDKFNWQLIKAKIEDYGHI-----RTELRIRDDVPFITDNGNY 193
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IVD DP + L ++ GV+E G F+++ D I+GT G + K
Sbjct: 194 IVDCELTTELDPYQLHEYLIHLTGVLETGFFLDIADQVIVGTQQG-VKIKNK 244
>gi|292654374|ref|YP_003534271.1| ribose 5-phosphate isomerase A [Haloferax volcanii DS2]
gi|291371716|gb|ADE03943.1| ribose 5-phosphate isomerase A [Haloferax volcanii DS2]
Length = 230
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 20 DGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
DG +G+GTGST + + D++A+G V+ +P+S + IP+ ++V +VD
Sbjct: 24 DGAVVGLGTGSTTAFAIRAIGDRVADGLDVRGVPTSFAARELARECGIPVVDLDEVDAVD 83
Query: 80 LSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
L+IDG D++ + L+KG G A REK++ A RF+V+ D SK + L +P+E+
Sbjct: 84 LAIDGADQVALADSALVKGGGAAHAREKVVDAFADRFLVVADPSKIAETL-SHAVPVEVL 142
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGEL 198
+ S G LR G V+D GN ++D FG IP+P+ ++ +L
Sbjct: 143 PSARTTVAA----GVSDLGGEATLRRAERKDGPVVTDNGNLVLDCEFGAIPNPESLATDL 198
Query: 199 CNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++PG +EHGLF+ + D +GT DG +
Sbjct: 199 ASLPGAVEHGLFVGLADAVYVGTDDGVEVT 228
>gi|85544643|pdb|2F8M|A Chain A, Ribose 5-Phosphate Isomerase From Plasmodium Falciparum
gi|85544644|pdb|2F8M|B Chain B, Ribose 5-Phosphate Isomerase From Plasmodium Falciparum
Length = 244
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 8/234 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
+K+ A +A+ YV MT+G+GTGST + + + + +G V IP+S +TE
Sbjct: 10 DSLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVLERIDNLLKSGKLKDVVCIPTSIDTEL 69
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + E S++D++IDG DEID L LIKG GGAL+REK++A ++S I+IGD
Sbjct: 70 KARKLGIPLTTLEKHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGD 129
Query: 121 ESKRVDFLG--RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
ESK G +PIEI FG K + L ++ + G ++R R +F++D N
Sbjct: 130 ESKLCTNGLGMTGAVPIEILTFGYEKIIENLLKIYTLKGCTYKIRKR--NGEIFITDNKN 187
Query: 179 YIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YIVD FF I D + GV++HG+F+NM + A+I DG L L K
Sbjct: 188 YIVDFFFTEPIQDLLETCTRIKMTTGVVDHGIFVNMTNVALISKHDGTVLTLNK 241
>gi|171184655|ref|YP_001793574.1| ribose 5-phosphate isomerase [Thermoproteus neutrophilus V24Sta]
gi|170933867|gb|ACB39128.1| ribose 5-phosphate isomerase [Thermoproteus neutrophilus V24Sta]
Length = 223
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 118/227 (51%), Gaps = 10/227 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
K AR A++Y+ GM +G+G+G+TA+EF+ L + V ++ +S ++E
Sbjct: 3 KALVAREAVKYIKSGMVVGLGSGTTAREFIKALGELGPR--DVALVATSVDSELLAVEVG 60
Query: 66 -HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
L V +D+++DG DE+ L+KG GGALLREK++ + A RF+V+ +E K
Sbjct: 61 LGDRLRPLWAVDRIDIAVDGADEVTEEKILLKGRGGALLREKVVDYMAERFLVLIEEHKL 120
Query: 125 V-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V R +PIE+ + A++ + FG +LR G ++D GNY++D
Sbjct: 121 VQHIPARNPIPIEVVPWAWRSVARAVE---AKFGGTAKLRQDGAKLGPALTDNGNYLLDW 177
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVD-CAIIGTSDGECLVL 229
+P + EL IPGV+E+G+F D ++ DG VL
Sbjct: 178 TPPGPVEPS-LEEELKLIPGVVENGIFSKRRDATVLVARGDGTLKVL 223
>gi|300173533|ref|YP_003772699.1| ribose 5-phosphate isomerase A [Leuconostoc gasicomitatum LMG
18811]
gi|299887912|emb|CBL91880.1| ribose 5-phosphate isomerase A [Leuconostoc gasicomitatum LMG
18811]
Length = 231
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 122/231 (52%), Gaps = 8/231 (3%)
Query: 1 MDALQM-KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNT 58
MD + + K++AA A + +GMT+G+GTGST F+ LA ++ + + +S T
Sbjct: 1 MDNISLEKQHAAIAATLLIKNGMTVGLGTGSTVTIFLNALAKRMRQENLSITGVTTSFKT 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + I + +DV+++DL+IDG DE+D + IKG G A L EKI+A + R + I
Sbjct: 61 KTMAQNLGIKIIDIDDVATIDLTIDGADEVDYDMNGIKGGGAAFLMEKIVATNSKRIVWI 120
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D K LG LP+E+ FG K ++ L + R+ L V+D G+
Sbjct: 121 VDSQKVHLKLGLMPLPLEVVPFGSGKLMAELTKQQLY------PTWRKKDGKLLVTDMGH 174
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
YIVD I P ++ L G++EHGLF+++ D IIGT G +L
Sbjct: 175 YIVDLSLKTIDQPYELARYLDGKIGIVEHGLFLDIADEIIIGTPTGVEYLL 225
>gi|227507926|ref|ZP_03937975.1| ribose-5-phosphate isomerase A [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227192590|gb|EEI72657.1| ribose-5-phosphate isomerase A [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 240
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 7/215 (3%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPED 74
YV DGM +G+G+GST + L ++ G + + +S +T + I + +
Sbjct: 22 DYVKDGMIVGLGSGSTVTMLVDELGRRVQEKGLKFTGVSTSISTAKQAESLGIKIVDLDS 81
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ ++DL+IDG D++DS IKG GG LL EKI+A + + I I D+SK VD +G L
Sbjct: 82 IDAIDLTIDGADQVDSDFNGIKGGGGNLLWEKIVAANSKKLIWIVDKSKVVDRIGAFPLA 141
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
++++ FG + L + G N +R ++G +F +D N I+D I +P +
Sbjct: 142 VDVEPFGSHHVLKKFSDA----GFNPVVRTDKDGK-VFKTDSNNIILDLHLHEINNPDKL 196
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+ L N GV+EHGLF+N V+ ++G G +L
Sbjct: 197 ADTLINTVGVVEHGLFLNAVNEVVVGKE-GAPQIL 230
>gi|205374744|ref|ZP_03227538.1| ribose 5-phosphate isomerase [Bacillus coahuilensis m4-4]
Length = 230
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 7/229 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ A++A+ Y+ DGM +G+G GST K + +A V++I S T C
Sbjct: 2 MDKKQQCAKKAMDYIKDGMVIGLGGGSTIKHLIGYIARSDKE---VKIITPSFETRQHCI 58
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + S DV V ++ DG D++D + +K GG EK+IA A+ +I++ D+SK
Sbjct: 59 EAGLRVLSTSDVGEVSVAFDGCDQVDEQFHSLKSGGGIHTEEKLIASMANDYILLVDDSK 118
Query: 124 RVDFLGRGMLPI-EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V L + E+ + L+ ++ G LR+ ++ G +++ GNY++D
Sbjct: 119 YVPTLTYDHPVVLEVLPQALAFVKRQLESFSTLGGA---LRMSKDRDGAVLTENGNYLID 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
F + + + L +PGV+E LF +V ++ T +G V +
Sbjct: 176 VRFPPQENSRGLEQSLKGLPGVVEVSLFTAVVSKVLVATDNGVREVASR 224
>gi|27468829|ref|NP_765466.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis ATCC
12228]
gi|57867820|ref|YP_189484.1| ribose-5-phosphate isomerase A [Staphylococcus epidermidis RP62A]
gi|251811961|ref|ZP_04826434.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875251|ref|ZP_06284124.1| ribose 5-phosphate isomerase A [Staphylococcus epidermidis SK135]
gi|293367045|ref|ZP_06613717.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38258567|sp|Q8CRC8|RPIA_STAES RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|67461255|sp|Q5HLQ9|RPIA_STAEQ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|27316377|gb|AAO05552.1|AE016750_157 ribose 5-phosphate isomerase [Staphylococcus epidermidis ATCC
12228]
gi|57638478|gb|AAW55266.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis RP62A]
gi|251804560|gb|EES57217.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296016|gb|EFA88537.1| ribose 5-phosphate isomerase A [Staphylococcus epidermidis SK135]
gi|291318775|gb|EFE59149.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329726492|gb|EGG62955.1| ribose 5-phosphate isomerase A [Staphylococcus epidermidis VCU144]
gi|329733830|gb|EGG70154.1| ribose 5-phosphate isomerase A [Staphylococcus epidermidis VCU028]
gi|329735095|gb|EGG71391.1| ribose 5-phosphate isomerase A [Staphylococcus epidermidis VCU045]
Length = 230
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
DA ++K + + +GMT+G+GTGST + + +A+ I + + + +S T
Sbjct: 3 DAKELKLMTLEDVLSQIENGMTIGIGTGSTIELLIPQIAELIQQKNYTITGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + + DV +DL+IDG DE+DS L LIKG GGAL REK+I A RF+V+ D
Sbjct: 63 LAKELAMNIVDVNDVEKIDLAIDGADEVDSALNLIKGGGGALFREKVIDEMADRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
ESK V+ LP+E+D+F + ++ + R N F++D GNY
Sbjct: 123 ESKLVNYLGETFALPVEVDKFNWYQVAKKIERTYDIH-----VSRRVNEDVPFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D + L ++ GV+E G F+++ D I+GT +G +L K
Sbjct: 178 ILDCSLQNRIPAYELHEFLIHLTGVLETGYFLDIADQVIVGTQEG-VKILNK 228
>gi|320334959|ref|YP_004171670.1| ribose-5-phosphate isomerase A [Deinococcus maricopensis DSM 21211]
gi|319756248|gb|ADV68005.1| Ribose-5-phosphate isomerase A [Deinococcus maricopensis DSM 21211]
Length = 226
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNT 58
MD +K++AA RA+ ++ GM +G+GTGSTAK + L K+ +G + + +S +
Sbjct: 1 MDLEALKKDAALRAVTFIRSGMRVGLGTGSTAKYAIEELGRKVTSGELTGITAVATSEAS 60
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + I + + D++IDG DEID +L LIKG GGALLREK++ A FIVI
Sbjct: 61 DALARAVGITVEDLDPRP-FDVAIDGADEIDPQLNLIKGLGGALLREKLVEIQAREFIVI 119
Query: 119 GDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D +K V + LPIE+ QFGV T L+ L LR NG FV+D G
Sbjct: 120 ADHTKIVTALGEKAPLPIEVAQFGVVSTTERLRA------LGATGELRMNGDRPFVTDNG 173
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N+I A F D L GV++ GLFI M A + +G +
Sbjct: 174 NFIFHARFPAGHDLTAAERSLKGTLGVVDTGLFIGMATRAFVAAPEGVREL 224
>gi|289550069|ref|YP_003470973.1| Ribose 5-phosphate isomerase A [Staphylococcus lugdunensis
HKU09-01]
gi|289179601|gb|ADC86846.1| Ribose 5-phosphate isomerase A [Staphylococcus lugdunensis
HKU09-01]
Length = 228
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
D Q+K A+ + D M LG+GTGST + + +ADKI + ++ + +S T
Sbjct: 3 DTKQLKLLTTDDAVAQIKDEMILGIGTGSTIELLIPKIADKIKRDHLTIKGVCTSNKTAI 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + D++ +DL+IDG DE+D +L LIKG GGAL REK+I A+RF+V+ D
Sbjct: 63 LAKEQQIDIVDINDITYIDLAIDGADEVDPQLNLIKGGGGALFREKVIDELAARFVVLVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E K V+ LP+E+D+F + +++ LR F++D GNY
Sbjct: 123 EQKVVNYLGETFRLPVEVDKFNWQLIKAKIEDYGHI-----RTELRIRDDVPFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP + L ++ GV+E G F+++ D I+GT G + K
Sbjct: 178 ILDCELTTELDPYQLHEYLIHLTGVLETGFFLDIADQVIVGTQQG-VKIKNK 228
>gi|257465214|ref|ZP_05629585.1| ribose-5-phosphate isomerase A [Actinobacillus minor 202]
gi|257450874|gb|EEV24917.1| ribose-5-phosphate isomerase A [Actinobacillus minor 202]
Length = 219
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ +MK+ AA+ A+++V +G+G+GST F+ LA + +S+ +E
Sbjct: 1 MNQQEMKKIAAKAALKFVTPDTIVGVGSGSTVNCFIDELASM--KDQIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + S +VS +D+ IDG DEI + +IKG G AL REKI++ A +F+ I D
Sbjct: 59 RLKALGIEVFSANEVSELDVYIDGADEITPQGYMIKGGGAALTREKIVSSLAKKFVCIVD 118
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSTFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT +G ++
Sbjct: 169 ILDVHNFKILEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAKIL 218
>gi|118594715|ref|ZP_01552062.1| ribose-5-phosphate isomerase A [Methylophilales bacterium HTCC2181]
gi|118440493|gb|EAV47120.1| ribose-5-phosphate isomerase A [Methylophilales bacterium HTCC2181]
Length = 224
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 8/228 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFC 62
+ K A A+ YV + +G+GTGSTA F+ LA KI A ++V+ SS +T
Sbjct: 1 MNDKELVADAALDYVKNNSIVGLGTGSTADIFINALAKKISAESLNIKVVASSTSTHEKA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ S + ++ +DL IDG DEI L ++KG G L+REKI+A A+ FIVIGD+S
Sbjct: 61 NAAGLNYISIDQITELDLYIDGADEITENLDILKGRGYDLVREKILARASKSFIVIGDQS 120
Query: 123 KRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V + +PIEI T K + + E+R + ++ GNY++
Sbjct: 121 KIVSKIGEKYSIPIEITPIAWKIT----KILVEKLAIKCEVRENLTKNAFAITSYGNYVL 176
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
D F + + + E+ +IPGV EHGLFI+M A+I S+G+ +
Sbjct: 177 DCEFNE-TNLKKLGDEIASIPGVFEHGLFIDMCGLALIA-SNGQITKI 222
>gi|56754389|gb|AAW25382.1| SJCHGC03376 protein [Schistosoma japonicum]
Length = 259
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 10/232 (4%)
Query: 6 MKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
K+ A + A+ ++ D +G+G+G+T K + +A+K+ ++Q IP+S
Sbjct: 10 AKQKACQSAVSDWLKDNQIIGLGSGTTIKYAVEFIAEKVESENLQIQCIPTSFQARQLLI 69
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H +P+ + +D++ DG DE+D L LIKG GG LL+EKI+A + FI I DE K
Sbjct: 70 NHKLPVTDLDIHEKIDVTFDGADEVDEDLHLIKGGGGCLLQEKIVASCTANFIAIVDERK 129
Query: 124 RVDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
LG LPIE+ + +++ FG LR + G V+D GN++
Sbjct: 130 HSKRLGSYWTKGLPIEVIPMAFKPIQTRIEK---LFGGKVILREAVSKMGPVVTDNGNFL 186
Query: 181 VDAFFGFIPD--PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+D F ++ EL NIPGV++ GLFINM +G +G L+
Sbjct: 187 LDWKFDTNKQYYWPEVNIELSNIPGVVDTGLFINMARRIYVGNMNGTVCKLE 238
>gi|288930591|ref|YP_003434651.1| ribose 5-phosphate isomerase [Ferroglobus placidus DSM 10642]
gi|288892839|gb|ADC64376.1| ribose 5-phosphate isomerase [Ferroglobus placidus DSM 10642]
Length = 220
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 130/227 (57%), Gaps = 9/227 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKI 64
MK AA +A+++V +GM LG+G+GST + F+ L + + +V+VIP+S +TE
Sbjct: 1 MKEIAAEKALEFVENGMILGLGSGSTVRIFVEKLGELVRKERLKVEVIPTSYDTEILAVK 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ + + S + DL +DG D++D +L LIKG GGAL REKI+A A+ +F V+ DESK
Sbjct: 61 NGLKVSSLLEHPEPDLCVDGADQVDRKLNLIKGGGGALTREKIVAEASKKFYVVVDESKL 120
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V+ L +P+EI F LKE+ L +R G +SD GNYI D
Sbjct: 121 VERL-NMAIPVEILPFAYGFVERRLKELGYNCNLRTSVR----KLGPVISDNGNYIADVE 175
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVLQ 230
+ D + I + +PG+IEHG+F + MVD I+G DG ++ +
Sbjct: 176 AKEV-DVEKIERDF-RVPGIIEHGVFPSEMVDLVIVGRRDGAEIIRK 220
>gi|219847257|ref|YP_002461690.1| ribose 5-phosphate isomerase [Chloroflexus aggregans DSM 9485]
gi|254808705|sp|B8G2V0|RPIA_CHLAD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|219541516|gb|ACL23254.1| ribose 5-phosphate isomerase [Chloroflexus aggregans DSM 9485]
Length = 237
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 8/231 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K AA A+ + GM +G+G GSTA ++ +++ANG + +P + T
Sbjct: 3 SVETLKAMAAAAAVALIQPGMVIGLGFGSTAAYATRMIGERLANGELREIVGVPCAEGTA 62
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + +DV VD++IDG DE+D + LIKG GGALLREK++A A+ R +I
Sbjct: 63 ALARELGIPLTTLDDVERVDITIDGADEVDPYMALIKGGGGALLREKMVAQASRRVAIIV 122
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
DESK R LPIE+ FG T + G + LRLR +G F +D G+
Sbjct: 123 DESKLSPALGTRFALPIEVVDFGYRATARW----LAAQGGSVRLRLRSDG-QPFRTDQGH 177
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I+D G I DP +++ L G++EHGLFI + + + G ++
Sbjct: 178 LILDWACGPIADPTVLADRLAARAGIVEHGLFIGLATDLFVAGATGVRHIV 228
>gi|71065516|ref|YP_264243.1| ribose-5-phosphate isomerase A [Psychrobacter arcticus 273-4]
gi|71038501|gb|AAZ18809.1| ribose-5-phosphate isomerase [Psychrobacter arcticus 273-4]
Length = 219
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 17/219 (7%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
++Y+ D M LG+GTGST + LL G + SS+ TE+ + I +
Sbjct: 16 LRYIEDDMILGVGTGSTVNCLIELLPTLKLAG----AVASSQVTEDRLRALGIEIVDLNF 71
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GML 133
+D+ IDG DE+++ L+LIKG GGAL REKI+A A+++F+ + DESK V+ LGR +
Sbjct: 72 AGQLDVYIDGADEVNAHLQLIKGGGGALTREKIVAAASNKFVCMVDESKSVEILGRAFPV 131
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQI 193
PIE+ + L + E+ FV+D GN I+D + + +P
Sbjct: 132 PIEVLPQARSYVARQLARMGGEPVYRED----------FVTDYGNVILDTYDLDVSNPLA 181
Query: 194 ISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
+ +L NI GV+ +G+F N D + +S+G +L +
Sbjct: 182 LEQQLNNIVGVVCNGIFAANQADVLLKASSNG-VEILNR 219
>gi|68071373|ref|XP_677600.1| ribose 5-phosphate epimerase [Plasmodium berghei strain ANKA]
gi|56497778|emb|CAH93795.1| ribose 5-phosphate epimerase, putative [Plasmodium berghei]
Length = 237
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 127/234 (54%), Gaps = 9/234 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
+K+ A +A+ YV MT+G+GTGST + + + +G + +P+S +TE
Sbjct: 2 DSLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVIERIEALMKSGKIKNLICVPTSIDTEM 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K IPL +D++IDG DEID+ L LIKG GGAL+REK++A AS FI+I D
Sbjct: 62 KAKSLGIPLAGLTKNLKIDIAIDGADEIDADLNLIKGRGGALVREKLVAANASCFIIIVD 121
Query: 121 ESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
ESK G +PIEI FG + L ++++ + LR +F++D N
Sbjct: 122 ESKMCKDGLGTTGAVPIEILSFGYEMIIENLLKISALKNC---IYLREKNGEIFITDNNN 178
Query: 179 YIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YIVD FF I + ++ GVI+HG+F+NM A+I +G L L+K
Sbjct: 179 YIVDFFFDNPIENLVQTCEQIKMTTGVIDHGIFVNMASIALISKINGTILTLKK 232
>gi|224086831|ref|XP_002307978.1| predicted protein [Populus trichocarpa]
gi|222853954|gb|EEE91501.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 9/234 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+ +R AR+A++ V GM +G+G+G+T M L I G + + + +
Sbjct: 223 NQESTERILARKAVELVKSGMVIGLGSGTTISMVMEELGRLIREGKLKDIIAVGGNYQSR 282
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + VS +D++ DG DE+D L+K G A +K+I AS I++
Sbjct: 283 VLATQFGVTVVDLSGVSKIDIAFDGVDEVDFNKNLLKCGGPAHTMQKVIDSVASECIILV 342
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+ K V +P+E+ + L + G E+R N +G +D GN
Sbjct: 343 DQPKVVHRLGSAFPVPVEVLPPALTPVLKR----LATLGGVPEIRFTSNENGPLFTDLGN 398
Query: 179 YIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD-GECLVLQ 230
+VD F I +P + + +PGV+E+G+ + ++ + G V+
Sbjct: 399 MVVDVSFPNGIQNPAELEKNIKLLPGVVENGIVTGVATTVLVAVKERGAVNVMN 452
>gi|330843247|ref|XP_003293571.1| ribose-5-phosphate isomerase [Dictyostelium purpureum]
gi|325076093|gb|EGC29910.1| ribose-5-phosphate isomerase [Dictyostelium purpureum]
Length = 233
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+YV DGM +G+G+GST K + + + G +V +P+S + + L
Sbjct: 21 EYVKDGMNVGIGSGSTIKYAVDRIKEL---GLKVTCVPTSFQSTQLIIEAGLVLSDLSRT 77
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV---DFLGRGM 132
+ ++IDG DE D +IKG G L+EK +A+ + +++ D +K +
Sbjct: 78 PKLHVTIDGADECDKDFNIIKGGGACQLQEKCVAYVSDTLLIVADYTKDSVQLGDTWKKG 137
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD-AFFGFIPDP 191
+PIE+ + L LR+ N +G VSD GN+I+D F + +
Sbjct: 138 IPIEVIPMAYVPVMKK----LESLSLKPVLRMAVNKAGPVVSDNGNFIIDAIFTPPLQNI 193
Query: 192 QIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
++ ++ IPGV+E GLFINM G DG +
Sbjct: 194 PQLAIDIKMIPGVVETGLFINMAKKLYFGQKDGSVI 229
>gi|309800071|ref|ZP_07694266.1| ribose 5-phosphate isomerase A [Streptococcus infantis SK1302]
gi|308116322|gb|EFO53803.1| ribose 5-phosphate isomerase A [Streptococcus infantis SK1302]
Length = 201
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 7/200 (3%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHI 67
A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T + +I
Sbjct: 1 MAGIKAAEFVKDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTSKQAEGLNI 60
Query: 68 PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127
PL S + V VDL++DG DE+DS+ IKG GGALL EK++A + +I + DESK V+
Sbjct: 61 PLKSIDQVDFVDLTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEK 120
Query: 128 LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF 187
G LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 121 FGAFKLPVEVVQYGAEQVFRRFERAGY------KPSFREKDGQRFVTDMQNFIIDLALEV 174
Query: 188 IPDPQIISGELCNIPGVIEH 207
I DP + EL ++ GV+EH
Sbjct: 175 IEDPIALGQELDHVVGVVEH 194
>gi|170096248|ref|XP_001879344.1| ribose-5-phosphate isomerase [Laccaria bicolor S238N-H82]
gi|164645712|gb|EDR09959.1| ribose-5-phosphate isomerase [Laccaria bicolor S238N-H82]
Length = 249
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 119/239 (49%), Gaps = 11/239 (4%)
Query: 1 MDALQM-KRNAARRAIQ-YVVD-GMTLGMGTGSTAKEFMILLADKIANGFRVQV-IPSSR 56
MD ++ KR AA A+ +V +G+G+GST + + + + +V IP+
Sbjct: 1 MDIIESSKRLAAYTAVDNHVKPEHKVIGIGSGSTVPYVVERIVQQGVEANKGRVFIPTGF 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
++ + L + ++D+++DG DE+DS+L +KG G LREK++A AA FI
Sbjct: 61 QSKELIVSSGLGLGDVDQYPTIDVTLDGADEVDSQLNCVKGGGACHLREKVLAEAARTFI 120
Query: 117 VIGDESKRVDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFV 173
++ D K V +LG +PIE+ F K L L +V LR+ +G V
Sbjct: 121 LVADYRKNVQYLGTNFLQGVPIEVVPFAYAKVLQNLHQVLGSP--KATLRMAVKKAGPVV 178
Query: 174 SDGGNYIVDAFFG--FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
SD GN+I+DA F + DP I ++ + GV+E GLF M A G DG V
Sbjct: 179 SDNGNFIIDAPFDREKMIDPFTIMAQIKMLTGVVEVGLFCRMAKAAYFGNEDGTVTVRW 237
>gi|296113305|ref|YP_003627243.1| ribose 5-phosphate isomerase A [Moraxella catarrhalis RH4]
gi|295921000|gb|ADG61351.1| ribose 5-phosphate isomerase A [Moraxella catarrhalis RH4]
gi|326560293|gb|EGE10681.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis 7169]
gi|326576953|gb|EGE26859.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis O35E]
Length = 221
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K++AA+ A+ ++ DGM LG+GTGST + LL G + SS+ TE+ K
Sbjct: 11 KKSAAKAALSHIEDGMILGVGTGSTVNCLIELLPKVRLKG----AVASSQVTEDKLKALG 66
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
I ++ + +DL IDG DEID++ +IKG GGAL REKI+A A++RFI + D+SK V+
Sbjct: 67 IEIYDLNQLGVLDLYIDGADEIDAKGNMIKGGGGALTREKIVAAASNRFICMVDDSKIVN 126
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG+ + IE+ + G + R FV+D GN I+D +
Sbjct: 127 TLGKFPVAIEVLPQARSYVARE----LVAMGGDPVYREG------FVTDYGNVILDTYDL 176
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
I D + L NI GV+ HG+F + D + S G V+
Sbjct: 177 DITDAAKMEFTLNNIVGVVCHGIFASQSADLMLKAGSTGVDTVV 220
>gi|240949733|ref|ZP_04754065.1| ribose-5-phosphate isomerase A [Actinobacillus minor NM305]
gi|240295765|gb|EER46452.1| ribose-5-phosphate isomerase A [Actinobacillus minor NM305]
Length = 219
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ +MK+ AA+ A+++V +G+G+GST F+ LA + +S+ +E
Sbjct: 1 MNQQEMKKIAAKAALKFVTPDTIVGVGSGSTVNCFIDELASM--KDQIKGAVAASKASEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + S +VS +D+ IDG DEI + +IKG G AL REKI++ A +F+ I D
Sbjct: 59 RLKALGIEVFSANEVSELDVYIDGADEITPQGYMIKGGGAALTREKIVSSLAKKFVCIVD 118
Query: 121 ESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LG LP+E+ + G + E R V+D GN
Sbjct: 119 SSKQVDVLGSIFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 168
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT +G ++
Sbjct: 169 ILDVHNFKILEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAKIL 218
>gi|153877568|ref|ZP_02004285.1| Ribose 5-phosphate isomerase [Beggiatoa sp. PS]
gi|152065968|gb|EDN65715.1| Ribose 5-phosphate isomerase [Beggiatoa sp. PS]
Length = 200
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
V D +G+GTGSTA F+ +LA I + + SS+ + K H I + V
Sbjct: 1 MVED-SIIGIGTGSTANYFIDVLA-SIKHKIE-GTVASSKASLERLKWHGISVFDINSVD 57
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + IDG DE + LIKG GGAL REKI+A + +F+ I D+SK V+ LG+ LP+E
Sbjct: 58 EISVYIDGADESNQYRHLIKGGGGALTREKIVAAVSRKFVCIADDSKLVEVLGKFPLPVE 117
Query: 137 IDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISG 196
+ + G R F +D GN I+D I DP I+
Sbjct: 118 VIPMARSYVARE----LVKMGGKPVWREA------FTTDNGNVILDVHNLEIIDPVILET 167
Query: 197 ELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
EL I GV+ +GLF D ++G+ G ++
Sbjct: 168 ELNAITGVVTNGLFAARPADILLLGSDKGVKVL 200
>gi|319401632|gb|EFV89841.1| ribose 5-phosphate isomerase A [Staphylococcus epidermidis FRI909]
Length = 230
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
DA ++K + + +GMTLG+GTGST + + +A+ I + + + +S T
Sbjct: 3 DAKELKLMTLEDVLSQIENGMTLGIGTGSTIELLIPQIAELIQQKNYTITGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + + DV +DL+IDG DE+DS L LIKG GGAL REK+I A RF+V+ D
Sbjct: 63 LAKELAMNIVDVNDVEKIDLAIDGADEVDSALNLIKGGGGALFREKVIDEMADRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
ESK V+ LP+E+D+F + ++ + + R N F++D GNY
Sbjct: 123 ESKLVNYLGETFALPVEVDKFNWYQVAKKIE-----CTYDIHVNRRINEDVPFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D + L ++ GV+E G F+N+ D I+GT +G +L K
Sbjct: 178 ILDCSLQNRISAYELHEFLIHLTGVLETGYFLNIADQVIVGTQEG-VKILNK 228
>gi|46446809|ref|YP_008174.1| putative ribose 5-phosphate isomerase A [Candidatus Protochlamydia
amoebophila UWE25]
gi|67461427|sp|Q6MC00|RPIA_PARUW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|46400450|emb|CAF23899.1| putative ribose 5-phosphate isomerase A [Candidatus Protochlamydia
amoebophila UWE25]
Length = 232
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 6/216 (2%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
+++V D M +G+GTGST F+ L + G ++ I SS + ++ IP+ +
Sbjct: 21 VEFVQDQMIIGLGTGSTIAYFIEALGKRCQAGLKITAIASSERSMRQARLVGIPIVDSDT 80
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ +DL+IDG DEID ++IKG GGALLREK+IA A+ IV+ DE+K V+ LG+ +
Sbjct: 81 ILELDLTIDGADEIDPLKQMIKGGGGALLREKLIASASKEMIVVIDETKLVNKLGKFPVA 140
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD-AFFGFIPDPQI 193
EI F T + + G LR+ ++ S L+ +D GNYI D F I +P
Sbjct: 141 TEISIF----TFRHIVKKLKDHGYCGSLRVNQDQS-LYRTDNGNYIFDICFPEPIDNPIF 195
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
L + GV+E GLF N+ IIG +G ++
Sbjct: 196 EHNRLKSFAGVLETGLFFNLAGRVIIGYQNGMTKIV 231
>gi|224086829|ref|XP_002307977.1| predicted protein [Populus trichocarpa]
gi|222853953|gb|EEE91500.1| predicted protein [Populus trichocarpa]
Length = 536
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 8/222 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTE 59
++ A+RA+ V GM +G+GTG T + + I G + + ++ +
Sbjct: 243 SQDYLRHALAKRAVALVKSGMVIGLGTGRTLTLVIEEIGKLIQEGKLKGIVAVGTNYQSR 302
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + + DV+ +D++ D DE+D L+K G +K+I A I++
Sbjct: 303 ITARQYGMTTVDLNDVNDIDIAFDVVDEVDINKNLLKCRGANHTVQKVIDSMAKVCILLV 362
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
+ +K V + +E+ V+ L G E+R G ++D GN
Sbjct: 363 EHTKVVHRLGNNIPVAVEVLPIAVSPVLRR----LIALGGVPEIRSASRKDGSVITDLGN 418
Query: 179 YIVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAII 219
+VD F I +P + + IPGV+++G+F ++ ++
Sbjct: 419 MVVDVSFPSGIQNPADLEKNINMIPGVVDNGIFSSVATIVLV 460
>gi|170692231|ref|ZP_02883394.1| ribose 5-phosphate isomerase [Burkholderia graminis C4D1M]
gi|170142661|gb|EDT10826.1| ribose 5-phosphate isomerase [Burkholderia graminis C4D1M]
Length = 205
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 24 LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSID 83
+G+GTGSTA F+ LA A + SS T + H + ++ S+ + +D
Sbjct: 2 IGVGTGSTANCFIDALAANKAR--YRGAVSSSLATTARLQSHGFKVLDLNEIDSLPVYVD 59
Query: 84 GFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVN 143
G DEID +IKG GGAL REKI+A + F+ I D SK VD LG LPIE+
Sbjct: 60 GADEIDHSGAMIKGGGGALTREKIVASVSDVFVCIADASKLVDTLGNFPLPIEVVPMART 119
Query: 144 KTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPG 203
+ G +R+ + G+ F++D GN I+D I DP+ + + PG
Sbjct: 120 AIGRR----VTALGGVPVVRVTKEGT-PFITDNGNEIIDVKGLRISDPRTLETHINAWPG 174
Query: 204 VIEHGLFINM-VDCAIIGTSDGECLV 228
V+ GLF + ++GT G +
Sbjct: 175 VVTVGLFAGRGANLCLLGTDTGVQTI 200
>gi|169856445|ref|XP_001834881.1| ribose-5-phosphate isomerase [Coprinopsis cinerea okayama7#130]
gi|116504056|gb|EAU86951.1| ribose-5-phosphate isomerase [Coprinopsis cinerea okayama7#130]
Length = 295
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 7 KRNAARRAIQ-YVVD-GMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
KR AA A+ +V +G+G+GST + + + IP+ +
Sbjct: 52 KRLAAYTAVDQHVKPEHRIIGIGSGSTVPYVVDRIVQQGVELNAGRVFIPTGFQSRQLIV 111
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ L + ++D++IDG DE+D L +KG G LREK++A AA FI++ D K
Sbjct: 112 AAGLTLGDVDQYPTIDITIDGADEVDHNLNCVKGGGACHLREKVLAEAAHTFILVADYRK 171
Query: 124 RVDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
V FLG +PIE+ F NK L L LR+ +G VSD GN+I
Sbjct: 172 NVQFLGTNYLSGVPIEVVPFAYNKVLHNLHHSLGSP--KAALRMAIKKAGPVVSDNGNFI 229
Query: 181 VDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+DA F + DP + ++ + GV+E GLF M A G DG V
Sbjct: 230 IDAPFTQEQLADPYTVLAQIKMLTGVVEVGLFCKMAKAAYFGNEDGSVTVRW 281
>gi|168700985|ref|ZP_02733262.1| ribose 5-phosphate isomerase [Gemmata obscuriglobus UQM 2246]
Length = 230
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 111/222 (50%), Gaps = 7/222 (3%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
A +A++ V +G+GTG A F+ L K+ G R++ +P+S + IP
Sbjct: 10 AIAAKAVELVQPDTVVGLGTGRAATAFIQALGAKVQAGLRIRGLPTSEVSAELATKLGIP 69
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-F 127
L + +DV +D+ +DG DE+D LIKGYGGAL+REK++A A F+V+ K V
Sbjct: 70 LVTFDDVPYIDVCVDGADEVDPNGDLIKGYGGALVREKVVAAYARTFVVLAGGEKVVKVL 129
Query: 128 LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF 187
RG LP+E+ F + ++ GL LR FV+D GNYI+D
Sbjct: 130 GERGKLPVEVVTFALTP----CRKRLETLGLPSA--LRMKDGKPFVTDNGNYILDCRTTA 183
Query: 188 IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I P ++ IPGV+ G+F M +I +DG V
Sbjct: 184 ITAPADTEAQILAIPGVVGTGIFAKMAHTIMIQGTDGSVEVR 225
>gi|221132822|ref|XP_002154823.1| PREDICTED: similar to Ribose-5-phosphate isomerase [Hydra
magnipapillata]
Length = 232
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 9/219 (4%)
Query: 16 QYV-VDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPE 73
+YV + LG+G+GST + LA ++ ++ IP+S + + + L +
Sbjct: 15 KYVTKETKYLGVGSGSTIVYAVERLAQRVKEEDLNIKCIPTSFQSRQLILDNGLVLSDIQ 74
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF---LGR 130
+D+ IDG DE+D L IKG GG L +EKI+A A F++I D +KR +
Sbjct: 75 QHPELDIVIDGADEVDVNLNCIKGGGGCLTQEKIVASCAKNFVIIADSTKRSQHLGDSWK 134
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPD 190
+ +E+ + + LK+ G LR+ + +G V+D GN+I+D F + D
Sbjct: 135 NGVAVEVIPMAYSLVIMKLKQ----LGFYPSLRMAKAKTGPLVTDNGNFIIDFKFDKLTD 190
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+I++ L +IPG++E GLFI M + I G SDG +
Sbjct: 191 CKIVNDSLISIPGIVETGLFIEMANSVIFGFSDGTTEEI 229
>gi|297621558|ref|YP_003709695.1| Ribose 5-phosphate isomerase [Waddlia chondrophila WSU 86-1044]
gi|297376859|gb|ADI38689.1| Ribose 5-phosphate isomerase [Waddlia chondrophila WSU 86-1044]
Length = 231
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 6/216 (2%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+ + +GM +G+GTGSTA+ F+ LA + +G ++ + +S+ +E ++ IP+ + +
Sbjct: 21 ELIENGMVVGLGTGSTARCFIDALAARCRSGLKIAAVATSQESELQARLAGIPIADLDQL 80
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++D+ IDG DEIDS+ R+IKG GGAL REKIIA + +VI D SK+V+ LG LP+
Sbjct: 81 ETIDIDIDGADEIDSKKRMIKGGGGALFREKIIAGISKEMLVIIDSSKQVEALGAFPLPV 140
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF-GFIPDPQII 194
EI F TL +++ G +R G F+++ N I D P+ I
Sbjct: 141 EISLFAHQATLKQIRD----LGYRGSIRKNSKGKH-FITENQNLIFDIELAFPCHHPEEI 195
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+L IPGVI G FI I+G DG
Sbjct: 196 EDKLIRIPGVIGTGFFIGYAGRVIVGYEDGSTTTRS 231
>gi|255718213|ref|XP_002555387.1| KLTH0G08052p [Lachancea thermotolerans]
gi|238936771|emb|CAR24950.1| KLTH0G08052p [Lachancea thermotolerans]
Length = 275
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 LQMKRNAARRAIQYVVD---GMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPS 54
+ KR AA RA+ +D +G+G+GST L + + + IP+
Sbjct: 37 EEAKRVAAYRAVDENLDYANHRVIGVGSGSTVIYVAERLGQYLLDPQFSIYASQFICIPT 96
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
++ + + L S E +D+ DG DE+D L+LIKG GG L +EK+++ +AS+
Sbjct: 97 GFQSKELILTNGLRLGSVEQYPVIDIVFDGADEVDVNLQLIKGGGGCLFQEKLVSTSASK 156
Query: 115 FIVIGDESKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGS 169
F+V+ D KR +PIE+ + L+ LK C N LR +
Sbjct: 157 FVVVADYRKRSPKYLGTNWVKGVPIEVVPTSYIRVLNDLKTKLKCK--NAVLRQGAPAKA 214
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
G V+D N+I+DA FG I P+ + ++ + GV+E GLFI+ A G DG +L
Sbjct: 215 GPVVTDNCNFIIDAHFGEIEHPEKLHQDIKMLVGVVETGLFIDNASKAYFGNPDGSVEML 274
>gi|255074643|ref|XP_002500996.1| ribose 5-phosphate isomerase [Micromonas sp. RCC299]
gi|226516259|gb|ACO62254.1| ribose 5-phosphate isomerase [Micromonas sp. RCC299]
Length = 226
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 115/216 (53%), Gaps = 10/216 (4%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
M +G+GTGSTA + L +K+ +G + IP+S T + IPL + + S +D
Sbjct: 1 MVVGLGTGSTAYFAVERLGEKLKSGELKDIIAIPTSERTREQAESLGIPLCTLNEKSVLD 60
Query: 80 LSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGMLPIEID 138
++IDG DE+D L L+KG GGALLREK++ A +F+VI DESK LP+EI
Sbjct: 61 VAIDGADEVDPDLALVKGGGGALLREKMVEVMAKKFVVIVDESKLCKGLGPGFPLPVEIT 120
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLR------RNGSGLFVSDGGNYIVDAFFG-FIPDP 191
F TL + + S G LR+ +G + V+D GNYIVD F I D
Sbjct: 121 PFCHMHTLRTIAALPSVAGCEAVLRMGSSSTNKPDGDNIAVTDNGNYIVDLHFKEPIKDV 180
Query: 192 QIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+ EL N GV++HGLF+ M I+ DG +
Sbjct: 181 NKAAEELKNTVGVVDHGLFVGMSYQVIVAGKDGIKV 216
>gi|326561987|gb|EGE12320.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis 46P47B1]
gi|326565299|gb|EGE15484.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis 12P80B1]
gi|326566389|gb|EGE16539.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis BC1]
gi|326570199|gb|EGE20244.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis BC8]
gi|326570936|gb|EGE20960.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis BC7]
Length = 249
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K++AA+ A+ ++ DGM LG+GTGST + LL G + SS+ TE+ K
Sbjct: 39 KKSAAKAALSHIEDGMILGVGTGSTVNCLIELLPKVRLKG----AVASSQVTEDKLKALG 94
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
I ++ + +DL IDG DEID++ +IKG GGAL REKI+A A++RFI + D+SK V+
Sbjct: 95 IEIYDLNQLGVLDLYIDGADEIDAKGNMIKGGGGALTREKIVAAASNRFICMVDDSKIVN 154
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG+ + IE+ + G + R FV+D GN I+D +
Sbjct: 155 TLGKFPVAIEVLPQARSYVARE----LVAMGGDPVYREG------FVTDYGNVILDTYDL 204
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
I D + L NI GV+ HG+F + D + S G V+
Sbjct: 205 DITDAAKMEFTLNNIVGVVCHGIFASQSADLMLKAGSTGVDTVV 248
>gi|315425513|dbj|BAJ47175.1| ribose 5-phosphate isomerase A [Candidatus Caldiarchaeum
subterraneum]
gi|315427522|dbj|BAJ49125.1| ribose 5-phosphate isomerase A [Candidatus Caldiarchaeum
subterraneum]
Length = 224
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +++ K+ AA+ A+++V DG +G+G+G+T + LA A G ++ +IP+S +
Sbjct: 1 MFSVEAKKRAAKEAVKFVDDGFVVGVGSGTTVSLILSELA---AAGKKIVIIPASWQSYY 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + S + D+ +D FD++ +IKG GGA+LREK++A A+ + +GD
Sbjct: 58 EAIELGLMVSSLDQHPCPDVYLDSFDQVTRDGAMIKGGGGAMLREKVLASASRNRVFVGD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
K V+ L R +P+EI F + L+E +R + +G VSD GN I
Sbjct: 118 HGKLVEKLRR-PVPLEIIPFAYKFVENRLREKGVKL----VMRTSQAKNGPTVSDNGNII 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
DA FG I +P + L IPGV+E G+F+ +VD II G+
Sbjct: 173 GDADFGEIDEPAQVEKFLKEIPGVVESGIFMGLVDTLIIAHDYGKVE 219
>gi|45185611|ref|NP_983327.1| ACL077Cp [Ashbya gossypii ATCC 10895]
gi|74695074|sp|Q75CJ6|RPIA_ASHGO RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|44981329|gb|AAS51151.1| ACL077Cp [Ashbya gossypii ATCC 10895]
Length = 255
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 4 LQMKRNAARRAIQYVVD---GMTLGMGTGSTAKEFMILLAD-----KIANGFRVQVIPSS 55
KR A+ RA+ +D +G+G+GST + ++ IP+
Sbjct: 17 EDAKRAASYRAVDENLDPAKHRVVGIGSGSTVVYVAERIGKYQASPELKAKVEFICIPTG 76
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
+ + + L S E VD++ DG DE+D L LIKG G L +EK+++ ++++F
Sbjct: 77 FQSRQLILDNGLRLGSIEQYPEVDIAFDGADEVDPELNLIKGGGACLFQEKLVSTSSAQF 136
Query: 116 IVIGDESKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLN-EELRLR-RNGS 169
IV+ D KR +P+E+ + L ++ G +LRL +
Sbjct: 137 IVVADSRKRSPQRLGTSWTRGVPVEVVPSAYVRVLR---DLHGIPGCRSAQLRLGEPGKA 193
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
G V+D N ++DA FG + DP + + + GV+E G+F A G++DG L
Sbjct: 194 GPVVTDNNNLLIDADFGPLEDPAALHARIKALVGVVETGIFAGNAAKAYFGSADGSTQTL 253
Query: 230 QK 231
+
Sbjct: 254 AR 255
>gi|156087947|ref|XP_001611380.1| ribose 5-phosphate isomerase A family protein [Babesia bovis]
gi|154798634|gb|EDO07812.1| ribose 5-phosphate isomerase A family protein [Babesia bovis]
Length = 240
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 84/235 (35%), Positives = 123/235 (52%), Gaps = 7/235 (2%)
Query: 1 MDALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSSRN 57
MD + R AA A+ Y+ +GM +G+GTGSTA + LA ++ A V + +S
Sbjct: 1 MDRQECMRRAAEFAVDTYIQNGMIVGLGTGSTASYAVRYLAKQLSAAKLRDVTAVATSVA 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
T IP +D S+D++IDG D ID L LIKG GGAL REK++ A + I+
Sbjct: 61 TFRLMSELGIPSLEFDDSVSIDVAIDGADAIDGDLNLIKGGGGALFREKLVELGARKVII 120
Query: 118 IGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I D +K+V L +P+EI QFG T+S + + R+ +GS L+++D
Sbjct: 121 IADGTKKVKGHLLQAFHVPVEIVQFGHVVTISRILSRVGPHVRSWTKRMNADGS-LYLTD 179
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
N I+D FG D + EL ++ GV+ GLF+ + +I SDG VL
Sbjct: 180 NNNVIMDIEFGP-TDLPNLDFELRSVHGVVCTGLFLGIASTVVIAHSDGNLEVLS 233
>gi|268573848|ref|XP_002641901.1| Hypothetical protein CBG16597 [Caenorhabditis briggsae]
gi|187026382|emb|CAP34518.1| CBR-RPIA-1 protein [Caenorhabditis briggsae AF16]
Length = 251
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
Q K+ AA + YV G LG+G+GST K + L NG + +P+S T+
Sbjct: 15 EQAKKRAAFACGEKYVQSGCRLGVGSGSTVKYLVEYLKQGYQNGQLKDIICVPTSFLTKQ 74
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +P+ + +D+ IDG DE+D + IKG GG L +EKI+ AA F VI D
Sbjct: 75 WLIESGLPVSDLDAHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKHFYVIAD 134
Query: 121 ESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
K +PIE+ L ++ G + +LR G V+D GN
Sbjct: 135 YLKDSKHLGDRYPAVPIEVLPPASQPLLRSIPR---AEGGSCQLRQATKKCGPVVTDNGN 191
Query: 179 YIVDAFFGFI---PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+I+D F D I L N PG++E GLFI VD SDG +
Sbjct: 192 FIIDWQFEKNVSGRDWLAIQQRLANTPGIVETGLFIGCVDAVFFAYSDGSVKEI 245
>gi|73661877|ref|YP_300658.1| ribose-5-phosphate isomerase A [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494392|dbj|BAE17713.1| putative ribose 5-phosphate isomerase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 232
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 8/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
MD Q+K + A+ + DGM +G+G+GST + + +A+K+ ++ + +S T
Sbjct: 1 MDKKQLKMSTFNDALDQIKDGMIVGIGSGSTIELLVPKIAEKLEQEQIKITGVCTSNKTA 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
K I + DV +D++IDG DEID+ L LIKG GGAL REK+I A RF+V+
Sbjct: 61 FIAKELGIHIIDVNDVDHIDIAIDGADEIDNDLNLIKGGGGALFREKVIDAMAERFVVLA 120
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D+SK VD LP+E+D+F +K ++ R F++D GN
Sbjct: 121 DDSKCVDYLGQTFKLPVEVDKFNWLLVAKRIKAYDEL-----KVTRRMVDDVPFITDNGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YI+D + + L ++ GV+E G F+N+ D AIIGT++G + K
Sbjct: 176 YILDVVLNEGINAAGMHEFLIHLIGVLETGYFLNVADQAIIGTTNG-VKIKNK 227
>gi|314934391|ref|ZP_07841750.1| ribose 5-phosphate isomerase A [Staphylococcus caprae C87]
gi|313652321|gb|EFS16084.1| ribose 5-phosphate isomerase A [Staphylococcus caprae C87]
Length = 228
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D ++K + DGMTLG+GTGST + + +A+ I + + + + +S T
Sbjct: 3 DVKELKLMTLDDVTSQIKDGMTLGIGTGSTIELLVPKIAELIHQHHYEITGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +DL+IDG DE+D L LIKG GGAL REK+I A RF+VI D
Sbjct: 63 LAKELDINIVEVNDVKKIDLAIDGADEVDPNLNLIKGGGGALFREKVIDEMAERFVVIAD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K VD +LP+E+D+F + ++ + ++ R N F +D GNY
Sbjct: 123 ENKIVDYLGQTFVLPVEVDKFNWYQVSKKIESIK-----GVKVNRRVNEDVPFTTDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP + L ++ GV+E G F++M D AI+GT +G ++ K
Sbjct: 178 ILDCNLPEGIDPYEMHEFLIHLTGVLETGYFLDMTDQAIVGTQNG-VKIMDK 228
>gi|326563624|gb|EGE13876.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis 103P14B1]
gi|326573231|gb|EGE23199.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis 101P30B1]
Length = 249
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K++AA+ A+ ++ DGM LG+GTGST + LL G + SS+ TE+ K
Sbjct: 39 KKSAAKAALSHIEDGMILGVGTGSTVNCLIELLPKVHLKG----AVASSQVTEDKLKALG 94
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
I ++ V +DL IDG DEID++ +IKG GGAL REKI+A A++RFI + D+SK V+
Sbjct: 95 IEIYDLNQVGVLDLYIDGADEIDAKGNMIKGGGGALTREKIVAAASNRFICMVDDSKIVN 154
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG+ + IE+ + G + R FV+D GN I+D +
Sbjct: 155 TLGKFPVAIEVLPQARSYVARE----LVAMGGDPVYREG------FVTDYGNVILDTYDL 204
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
I D + L NI GV+ HG+F + D + S G V+
Sbjct: 205 DITDAAKMEFTLNNIVGVVCHGVFASQSADLMLKAGSAGVDTVV 248
>gi|223042348|ref|ZP_03612397.1| ribose 5-phosphate isomerase A [Staphylococcus capitis SK14]
gi|222444011|gb|EEE50107.1| ribose 5-phosphate isomerase A [Staphylococcus capitis SK14]
Length = 228
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 123/232 (53%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
D ++K + DGMTLG+GTGST + + +A+ I + + + + +S T
Sbjct: 3 DVKELKLMTLDDVTSQIKDGMTLGIGTGSTIELLVPKIAELIHQHHYEITGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +DL+IDG DE+D L LIKG GGAL REK+I A +F+VI D
Sbjct: 63 LAKELDINIVEVNDVKKIDLAIDGADEVDPNLNLIKGGGGALFREKVIDEMAEKFVVIAD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K VD +LP+E+D+F + ++ + ++ R N F +D GNY
Sbjct: 123 ENKIVDYLGQTFVLPVEVDKFNWYQVSKKIESIK-----GVKVNRRVNEDVPFTTDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP + L ++ GV+E G F++M D I+GT +G ++ K
Sbjct: 178 ILDCNLPEGIDPYEMHEFLIHLTGVLETGYFLDMTDQVIVGTQNG-VKIMDK 228
>gi|19115585|ref|NP_594673.1| ribose 5-phosphate isomerase (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638896|sp|Q9UTL3|RPIA_SCHPO RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|6138903|emb|CAB59692.1| ribose 5-phosphate isomerase (predicted) [Schizosaccharomyces
pombe]
Length = 274
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 10/231 (4%)
Query: 6 MKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR A A+ Y + +G+G+GST + L K V IP+ ++
Sbjct: 16 AKRLACHMAVDENYPENPKVIGIGSGSTVVYVVERLLTKPGVD-SVVFIPTGFQSKQLIV 74
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + L P+ +VD+S DG DE+D L+ IKG G L +EK+IA A R +++ D K
Sbjct: 75 NNGLRLGDPDCYPNVDVSFDGADEVDDNLQCIKGGGACLFQEKLIAFLAKRLVIVADSRK 134
Query: 124 RVDFL---GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFVSDGGNY 179
L + +PIE+ L L E+ + +LR+ +G V+D GN+
Sbjct: 135 NSHVLGEYWKKGVPIEVMPMAYASILPQLVELGAI---EPKLRMGAPGKAGPVVTDNGNF 191
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+DA FG I +P+ + ++ + GV+E GLF +M+ G+ DG V +
Sbjct: 192 IIDAHFGLIKNPKELFAKIKLLVGVVEVGLFCDMISAVYFGSKDGSVTVKK 242
>gi|326575868|gb|EGE25791.1| ribose-5-phosphate isomerase A [Moraxella catarrhalis CO72]
Length = 249
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K++AA+ A+ ++ DGM LG+GTGST + LL G + SS+ TE+ K
Sbjct: 39 KKSAAKAALSHIEDGMILGVGTGSTVNCLIELLPKVHLKG----AVASSQVTEDKLKALG 94
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
I ++ V +DL IDG DEID++ +IKG GGAL REKI+A A++RFI + D+SK V+
Sbjct: 95 IEIYDLNQVGVLDLYIDGADEIDAKGNMIKGGGGALTREKIVAAASNRFICMVDDSKIVN 154
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
LG+ + IE+ + G + R FV+D GN I+D +
Sbjct: 155 TLGKFPVAIEVLPQARSYVARE----LVAMGGDPVYREG------FVTDYGNVILDTYDL 204
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVL 229
I D + L NI GV+ HG+F + D + S G V+
Sbjct: 205 DITDAAKMEFTLNNIVGVVCHGVFASQSADLMLKAGSAGVDTVV 248
>gi|242243860|ref|ZP_04798304.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis W23144]
gi|242232704|gb|EES35016.1| ribose 5-phosphate isomerase [Staphylococcus epidermidis W23144]
Length = 230
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTEN 60
DA ++K + + +GMTLG+GTGST + + +A+ I + + + +S T
Sbjct: 3 DAKELKLMTLEDVLGQIENGMTLGIGTGSTIELLIPQIAELIQKKNYTITGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K + + DV +DL+IDG DE+DS L LIKG GGAL REK+I A RF+V+ D
Sbjct: 63 LAKELAMNIVDVNDVEKIDLAIDGADEVDSALNLIKGGGGALFREKVIDEMADRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
ESK V+ LP+E+D+F + ++ + + R N F++D GNY
Sbjct: 123 ESKLVNYLGETFALPVEVDKFNWYQVAKKIE-----CTYDIHVNRRINEDVPFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D + L ++ GV+E G F+++ D I+GT +G +L K
Sbjct: 178 ILDCSLQNRISAYELHEFLIHLTGVLETGYFLDIADQVIVGTQEG-VKILNK 228
>gi|293400542|ref|ZP_06644687.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305568|gb|EFE46812.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 227
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 6/227 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + K+ AA AI Y+ DGM +G+G+G+T F+ L + A G +++ + SS T+
Sbjct: 1 MTKEEKKKQAALAAIAYLKDGMHIGLGSGTTVNYFLQALQQRCAKGLQIRAMASSLCTQQ 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ K + IPL + V ++D+ +D FD ++ +IKG GGAL+REK++ A + I I D
Sbjct: 61 WAKQYQIPLLADTYVQTLDVYVDSFDVLNHHGDIIKGGGGALVREKMLFQWADKTIWICD 120
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+ K VD LP+E+ F + T L E + LR + F++D +YI
Sbjct: 121 DEKLVDDCHCYALPVEVLPFTLAHTRHMLNEHGY------KTSLRMAETQPFLTDNQHYI 174
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+D F L + +++ G F + + II +S G C+
Sbjct: 175 LDVFVPKQVTLAQAHTFLMSFAAIVQTGYFHDEDNLCIIASSKGVCI 221
>gi|239637723|ref|ZP_04678691.1| ribose 5-phosphate isomerase A [Staphylococcus warneri L37603]
gi|239596682|gb|EEQ79211.1| ribose 5-phosphate isomerase A [Staphylococcus warneri L37603]
Length = 230
Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 7/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF-RVQVIPSSRNTEN 60
D Q+K + + DGMTLG+GTG+T + + +A I + + +S T
Sbjct: 3 DVKQLKLMTLDDVLSQIEDGMTLGIGTGTTIELLVPKIAQLIKEKHYNIIGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K +I + DV +DL+IDG DE+D +L LIKG GGAL REK+I A RF+VI D
Sbjct: 63 LAKELNINIVDVNDVEKIDLAIDGADEVDPQLNLIKGGGGALFREKVIDEMADRFVVIAD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K V+ LP+E+D+F + ++ + + R F +D GNY
Sbjct: 123 ENKVVNYLGETFKLPVEVDKFNWYQVAKKIETI-----GGVTTQRRVTDDVPFTTDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I+D DP + L +I GV+E G F+++ D AIIGT G
Sbjct: 178 ILDCALPKGIDPYEMHEFLIHITGVLETGYFLDVADQAIIGTQQGVKK 225
>gi|156095552|ref|XP_001613811.1| ribose 5-phosphate epimerase [Plasmodium vivax SaI-1]
gi|148802685|gb|EDL44084.1| ribose 5-phosphate epimerase, putative [Plasmodium vivax]
Length = 237
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 8/234 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
+KR A +A+ YV MT+G+GTG+T + + + NG V IP+S +TE
Sbjct: 2 DDLKRRVAYKAVDDYVQSNMTIGLGTGTTVFYVLERIEKLMRNGKITNVVCIPTSIDTEI 61
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ IPL + + S +D++IDG DEID L L+KG GGAL+REK++A +AS FI+I D
Sbjct: 62 KARNLGIPLTTLKKNSHIDIAIDGADEIDMDLNLVKGRGGALVREKLVAASASVFIIIVD 121
Query: 121 ESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
ESK G +PIEI FG K + L +++S N + +LR ++++D N
Sbjct: 122 ESKLCTNGLGTTGAVPIEILAFGHEKIIQNLLKISSLE--NCQYKLREKNGEVYITDNKN 179
Query: 179 YIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
YIVD +F I D Q ++ GV++HG+F+NM A+I DG L L K
Sbjct: 180 YIVDFYFANPIEDLQDTCHKIKMTTGVVDHGIFVNMTSVALISKHDGTVLKLDK 233
>gi|194757231|ref|XP_001960868.1| GF13575 [Drosophila ananassae]
gi|190622166|gb|EDV37690.1| GF13575 [Drosophila ananassae]
Length = 241
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 13/239 (5%)
Query: 3 ALQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRN 57
K+ AAR A+ D LG+G+GST + +A+++ G + +PSS
Sbjct: 6 VDASKKRAARTAVDEWVTEDTKILGIGSGSTIVYAVQRIAERVWKEGELTDLICVPSSYQ 65
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ +++ L + ++D++IDG DE+D + LIKG GG LL+EK++A A FIV
Sbjct: 66 AHHLILDYNLNLGDLDRNPNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIV 125
Query: 118 IGDESKRVDFLGRGML---PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
+ D +K LG PIE+ ++ + FG LR+ + +G V+
Sbjct: 126 VADYTKNSIRLGEQWCRGVPIEVAPMAYVPVKLQIE---ALFGGEASLRMAKVKAGPIVT 182
Query: 175 DGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+++D F D ++ + IPGV+E GLF+NM G +DG V K
Sbjct: 183 DNGNFLLDWKFIANREYDWDEVNRAITLIPGVLETGLFVNMAHKCYFGMADGNVKVQNK 241
>gi|90415224|ref|ZP_01223158.1| ribose 5-phosphate isomerase [marine gamma proteobacterium
HTCC2207]
gi|90332547|gb|EAS47717.1| ribose 5-phosphate isomerase [marine gamma proteobacterium
HTCC2207]
Length = 226
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 18/237 (7%)
Query: 1 MDALQMKRNAARRAIQY----VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
MD Q+K A A++Y + +G+GTGSTA F+ LLA+ + SS
Sbjct: 1 MDQNQLKLAVAAAAVEYTLSKINPDSIVGIGTGSTANCFIDLLAEH--KNSFQAAVASSD 58
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + H I + + + + IDG DE + L LIKG G AL REKI+ A+ F+
Sbjct: 59 ASAERLRGHGIEVIELNAAAEITIYIDGADEANPHLELIKGGGAALTREKIVTAVANEFV 118
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DESK VDFLG+ LP+E+ + G + R ++D
Sbjct: 119 CIADESKWVDFLGQFPLPVEVIPMARSHVARE----LVKLGGDPVWREN------VITDN 168
Query: 177 GNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
GN I+D + Q + ++ I GV+ +G F + D + T G K
Sbjct: 169 GNQILDVHHLYPVASAQALEEKINQITGVVTNGFFALKAADVLFLATQQGIVTHYPK 225
>gi|289449910|ref|YP_003475702.1| ribose 5-phosphate isomerase A [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184457|gb|ADC90882.1| ribose 5-phosphate isomerase A [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 269
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/250 (32%), Positives = 116/250 (46%), Gaps = 27/250 (10%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
Q KR A +A + + DGM +G+GTGSTA + +A G R++ + +S T
Sbjct: 18 EQGKRLAGYKACECLRDGMLIGLGTGSTAFYAIERTGQLVAEGLRIKAVATSEATAKLAA 77
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
HIPL S + V+ +D++IDG DEID + IKG GGAL REKIIA + I + DE K
Sbjct: 78 ARHIPLLSADAVTELDVAIDGVDEIDPQFNAIKGGGGALFREKIIAMMSKEVIWVMDERK 137
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL------------ 171
V +G LP+EI FG + + + GL LR RR
Sbjct: 138 LVPAIGDFHLPVEILPFGASSLIYKIDH----LGLKPRLRCRRGEELPDWTCPTVRRQIE 193
Query: 172 -----------FVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
+V+D GN +VD D I L + GV+E GLF+N+ +G
Sbjct: 194 VLQNPSESKQLWVTDNGNLLVDLMVDAPLDLGYIQKNLLPLTGVLETGLFLNICARMYVG 253
Query: 221 TSDGECLVLQ 230
++
Sbjct: 254 GQGTVREIIN 263
>gi|156843457|ref|XP_001644796.1| hypothetical protein Kpol_1020p47 [Vanderwaltozyma polyspora DSM
70294]
gi|190360231|sp|A7TLF7|RPIA_VANPO RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|156115446|gb|EDO16938.1| hypothetical protein Kpol_1020p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 259
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 16/242 (6%)
Query: 4 LQMKRNAARRAIQYV---VDGMTLGMGTGSTAKEFMILLADKIANGF------RVQVIPS 54
KR AA RA+ + +G+G+GST L + + + IP+
Sbjct: 18 EDAKRLAAYRAVDENVDFQNERVIGIGSGSTVVYVAERLGQYLKDPKYTKYVSQFVCIPT 77
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + L S + +D++ DG DE+D L+LIKG G L +EK+++ +A R
Sbjct: 78 GFQSRALILDNGLQLDSIDHHPIIDIAFDGADEVDVNLQLIKGGGACLFQEKLVSTSAKR 137
Query: 115 FIVIGDESKRVDF----LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGS 169
FIV+ D K+ R +PIE+ + L +R +
Sbjct: 138 FIVVADHRKQSPQYLGKNWRQGVPIEVVPSAYVRVQHDLLNKLHAQ--TAVVRQGGSAKA 195
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
G V+D N+I+DA FG I DP+ + + + GV+E GLFI+ + G +DG VL
Sbjct: 196 GPVVTDNNNFIIDADFGEIKDPKSLYVSIEMLIGVVEVGLFIDNAEKVYFGNADGSVNVL 255
Query: 230 QK 231
K
Sbjct: 256 DK 257
>gi|256080026|ref|XP_002576284.1| ribose-5-phosphate isomerase [Schistosoma mansoni]
gi|238661549|emb|CAZ32520.1| ribose-5-phosphate isomerase, putative [Schistosoma mansoni]
Length = 1410
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
D +G+G+G+T K + +A+K+ ++Q IP+S H +P+ +
Sbjct: 1181 QDNQIIGLGSGTTIKYAVEYIAEKVKKENLQIQCIPTSFQARQLLINHKLPVTELDICEQ 1240
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM---LP 134
+D++ DG DE+D L LIKG GG LL+EKI+A + FI I DE K LG LP
Sbjct: 1241 IDVTFDGADEVDEHLHLIKGGGGCLLQEKIVASCTNDFIAIIDERKHSKRLGSYWTKGLP 1300
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPD--PQ 192
IE+ + +++ FG LR + G V+D GN+++D F
Sbjct: 1301 IEVVPMAFKPVQTRIQK---LFGGQAILREAVSKMGPVVTDNGNFLLDWKFDTNKQYYWP 1357
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++ +L IPG+++ GLFINM IG +G L+
Sbjct: 1358 DVNVQLSQIPGIVDTGLFINMTSRIYIGNLNGTVTKLE 1395
>gi|254510424|ref|ZP_05122491.1| ribose 5-phosphate isomerase A [Rhodobacteraceae bacterium KLH11]
gi|221534135|gb|EEE37123.1| ribose 5-phosphate isomerase A [Rhodobacteraceae bacterium KLH11]
Length = 217
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K AA RA V GM +G+GTGSTA
Sbjct: 9 DKAKYVAAHRAADLVQSGMRVGLGTGSTAAW----------------------------- 39
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+DL+IDG DE D LIKG G ALL+EKI+A A+ + +VI D K
Sbjct: 40 --------------LDLTIDGADEFDQEFNLIKGGGAALLQEKIVATASDQMVVIADAGK 85
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEE-LRLRRNGSGLFVSDGGNYIVD 182
V+ LG LP+E+ FG T + ++E + + LR NG ++D GN+I+D
Sbjct: 86 EVETLGAFPLPVEVIPFGWQTTRTLIEEALDTMDVLGTLVTLRMNGEAPKITDEGNHILD 145
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I + + ++ L IPGV+E+GLFI++ D I+G +G +
Sbjct: 146 LHLKRIGNVRQMALVLNQIPGVVENGLFIDICDKVIVGYGNGRVELRD 193
>gi|17551758|ref|NP_498556.1| hypothetical protein B0280.3 [Caenorhabditis elegans]
gi|1173140|sp|P41994|RPIA_CAEEL RecName: Full=Probable-ribose 5-phosphate isomerase; AltName:
Full=Phosphoriboisomerase
gi|500774|gb|AAA19091.1| Hypothetical protein B0280.3 [Caenorhabditis elegans]
Length = 251
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 107/234 (45%), Gaps = 11/234 (4%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
Q K+ AA + YV G LG+G+GST K + L NG + +P+S T+
Sbjct: 15 EQAKKRAAFACGEKYVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTKQ 74
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +P+ + +D+ IDG DE+D + IKG GG L +EKI+ AA F VI D
Sbjct: 75 WLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIAD 134
Query: 121 ESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
K LG PIE+ L ++ G + +LR G V+D GN
Sbjct: 135 YLKDSKHLGDRYPNVPIEVLPLAAQPLLRSIPR---AEGGSCQLRQAVKKCGPIVTDNGN 191
Query: 179 YIVDAFFGFI---PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+I+D F D I L N PG++E GLFI VD SDG +
Sbjct: 192 FIIDWQFEKNVSGRDWFAIQQRLANTPGIVETGLFIGCVDAVFFAYSDGSVKEI 245
>gi|330685068|gb|EGG96736.1| ribose 5-phosphate isomerase A [Staphylococcus epidermidis VCU121]
Length = 230
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 7/228 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF-RVQVIPSSRNTEN 60
D Q+K + + DGMTLG+GTGST + + +A I + + +S T
Sbjct: 3 DVKQLKMMTLDDVLSQIEDGMTLGIGTGSTIELLVPKIAQLIDEKHYNIIGVCTSNKTAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K +I + D+ +DL+IDG DE+D +L LIKG GGAL REK+I A RF+VI D
Sbjct: 63 LAKELNINIVDVNDIDKIDLAIDGADEVDPQLNLIKGGGGALFREKVIDEMADRFVVIAD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K V+ LP+E+D+F + ++ + R F +D GNY
Sbjct: 123 ENKVVNYLGETFKLPVEVDKFNWYQVAKKIETID-----GVTTERRVTDDVPFTTDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I+D + DP + L +I GV+E G F+++ D AIIGT G
Sbjct: 178 ILDCALPKVIDPYEMHEFLIHITGVLETGYFLDVADQAIIGTQQGVKK 225
>gi|315427535|dbj|BAJ49137.1| ribose 5-phosphate isomerase A [Candidatus Caldiarchaeum
subterraneum]
Length = 224
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +++ K+ AA+ A+++V DG +G+G+G+T + LA A G ++ +IP+S +
Sbjct: 1 MFSVEAKKRAAKEAVKFVDDGFVVGVGSGTTVSLILSELA---AAGKKIVIIPASWQSYY 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + S + D+ +D FD++ +IKG GGA+LREK++A A+ + +GD
Sbjct: 58 EAIELGLMVSSLDQHPCPDVYLDSFDQVTRDGAMIKGGGGAMLREKVLASASRNRVFVGD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
K V+ L R +P+EI F + L+E +R + +G VSD GN I
Sbjct: 118 HGKLVEKLRR-PVPLEIIPFAYKFVENRLREKGVKL----VMRTSQAKNGPTVSDNGNII 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
DA FG I +P + L IPGV+E G+F+ +VD II G+
Sbjct: 173 GDADFGEIDEPAQVEKFLKEIPGVVESGVFVGLVDTLIIAHDYGKIE 219
>gi|308501377|ref|XP_003112873.1| CRE-RPIA-1 protein [Caenorhabditis remanei]
gi|308265174|gb|EFP09127.1| CRE-RPIA-1 protein [Caenorhabditis remanei]
Length = 267
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
Q K+ AA + YV G LG+G+GST K + L NG + +P+S T+
Sbjct: 31 EQAKKRAAYACGEKYVHSGCRLGVGSGSTVKYLVEYLKQGYQNGQLKDIICVPTSFLTKQ 90
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ +P+ + +D+ IDG DE+D + IKG G L +EKI+ AA F VI D
Sbjct: 91 WLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGACLAQEKIVQTAAKHFYVIAD 150
Query: 121 ESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
K +PIE+ L + G + +LR G V+D GN
Sbjct: 151 YLKDSKHLGDRYPAVPIEVLPPASQPLL---LSIPRAEGGSCQLRQATKKCGPVVTDNGN 207
Query: 179 YIVDAFFGFI---PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+I+D F D I L N PG++E GLFI VD SDG +
Sbjct: 208 FIIDWQFEKNVSGRDWLAIQQRLANTPGIVETGLFIGCVDAVFFAYSDGSVKEI 261
>gi|54293056|ref|YP_125471.1| ribose-5-phosphate isomerase A [Legionella pneumophila str. Lens]
gi|67461337|sp|Q5X0C7|RPIA_LEGPL RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|53752888|emb|CAH14323.1| hypothetical protein lpl0093 [Legionella pneumophila str. Lens]
gi|307608840|emb|CBW98232.1| hypothetical protein LPW_00921 [Legionella pneumophila 130b]
Length = 216
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
D M +G+GTGST F+ LA I + + SS+ TE + IP+ V +
Sbjct: 17 EDDMVIGVGTGSTVNFFIKELAA-IKHKIE-ACVASSKATEALLRAEGIPVIDLNSVQDL 74
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ +DG DE++ R +IKG GGAL REKI+A+ A++FI I DESK V LG + +E+
Sbjct: 75 PIYVDGADEVNERGEMIKGGGGALTREKIVANVATQFICIVDESKVVKRLGEFPVAVEVI 134
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGEL 198
+ + + G + E R F++D GN I+D F P + L
Sbjct: 135 PMARSFVARQIVK----LGGDPEYREG------FITDNGNIILDVFNLNFSTPMALEDSL 184
Query: 199 CNIPGVIEHGLFINM-VDCAIIGTSDGE 225
IPGV+E+G+F D ++ ++ G
Sbjct: 185 NVIPGVVENGVFAKRLADKVLVASASGV 212
>gi|148358251|ref|YP_001249458.1| ribose-5-phosphate isomerase A [Legionella pneumophila str. Corby]
gi|296105604|ref|YP_003617304.1| ribose 5-phosphate isomerase A [Legionella pneumophila 2300/99
Alcoy]
gi|166200051|sp|A5I9R2|RPIA_LEGPC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|148280024|gb|ABQ54112.1| ribose-5-phosphate isomerase A [Legionella pneumophila str. Corby]
gi|295647505|gb|ADG23352.1| ribose 5-phosphate isomerase A [Legionella pneumophila 2300/99
Alcoy]
Length = 216
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
D M +G+GTGST F+ LA I + + SS+ TE + IP+ V +
Sbjct: 17 EDDMVIGVGTGSTVNFFIKELAA-IKHKIE-ACVASSKATEALLRAEGIPVIDLNSVQDL 74
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ +DG DE++ R +IKG GGAL REKI+A+ A++FI I DESK V LG + +E+
Sbjct: 75 PIYVDGADEVNERGEMIKGGGGALTREKIVANVATQFICIVDESKVVKRLGEFPVAVEVI 134
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGEL 198
+ + + G + E R FV+D GN I+D F P + L
Sbjct: 135 PMARSFVARQIVK----LGGDPEYREG------FVTDNGNIILDVFNLNFSTPMALEDSL 184
Query: 199 CNIPGVIEHGLFINM-VDCAIIGTSDGE 225
IPGV+E+G+F D ++ ++ G
Sbjct: 185 NVIPGVVENGVFAKRLADKVLVASASGV 212
>gi|42527149|ref|NP_972247.1| ribose-5-phosphate isomerase A [Treponema denticola ATCC 35405]
gi|67461473|sp|Q73M68|RPIA_TREDE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|41817573|gb|AAS12158.1| ribose 5-phosphate isomerase A [Treponema denticola ATCC 35405]
Length = 239
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 119/241 (49%), Gaps = 18/241 (7%)
Query: 1 MDALQMKRNAARRAIQ------YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVI 52
MD Q+K A AI + DGM +G+GTGSTA + LA +++G ++ +
Sbjct: 1 MDTSQLKERVAYHAIDTLFSEGKIFDGMKIGLGTGSTAMPAVHRLAQLLSSGKLKKIYAV 60
Query: 53 PSSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
P+S T C+ IP++S S+DL+IDG DEID LIKG G ALL+EKIIA
Sbjct: 61 PTSFQTSIECEKLGIPIYSLSSQQIGGSLDLAIDGADEIDPDKNLIKGGGAALLKEKIIA 120
Query: 110 HAASRFIVIGDESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG 168
+ + F+VI DE K+V +G+ LPIEI A G+ LR
Sbjct: 121 YNSKEFVVIADERKKVKSMGKGFALPIEIIPEARLSITKA----LEAQGIEVFLREGVKK 176
Query: 169 SGLFVSDGGNYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
G V+D GN+I+D + DP+ + L I GV+E+G F I DG
Sbjct: 177 MGPVVTDNGNFIIDVKWPKAADVDPKALEESLNKITGVVENGFFTKNTPRVFIVHQDGNI 236
Query: 227 L 227
Sbjct: 237 E 237
>gi|15894710|ref|NP_348059.1| ribose 5-phosphate isomerase [Clostridium acetobutylicum ATCC 824]
gi|15024372|gb|AAK79399.1|AE007654_8 Ribose 5-phosphate isomerase [Clostridium acetobutylicum ATCC 824]
gi|325508848|gb|ADZ20484.1| Ribose 5-phosphate isomerase [Clostridium acetobutylicum EA 2018]
Length = 227
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 8/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K+ +A++A++Y+ D +G+G G T L +KI +GF ++V+ S T N
Sbjct: 1 MAKDNLKKISAKKALEYIKDNTVIGLGGGETIGYLCDYLKEKIKSGFNIKVVTPSIKTRN 60
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C + I + V +D++ DG D++D +L +K GG +EKIIA A ++I++ +
Sbjct: 61 TCIENGIEVLYTSSVEHLDVAFDGCDQLDEKLNALKSCGGIHSKEKIIASMADKYILLTN 120
Query: 121 ESKRVDFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
ESK V L PI EI + + E G R G ++D GN
Sbjct: 121 ESKFVKKLD-STYPIVLEILEESAGYVKRRISE----IGGKATFRSSAAKDGFTITDSGN 175
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++D FF + D + + L I GV+E LF+++V AII D + ++ K
Sbjct: 176 LLLDVFFDELGDAKELQKGLKGITGVVETSLFVDLVSQAIIAYED-DIKIISK 227
>gi|289672294|ref|ZP_06493184.1| ribose-5-phosphate isomerase A [Pseudomonas syringae pv. syringae
FF5]
Length = 197
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 25 GMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDG 84
G+GTGSTA F+ LA + SS+ T K H IP++ VS ++ +DG
Sbjct: 3 GVGTGSTANCFIDALAKH--KTAFDGAVASSQATAVRLKAHGIPVYELNTVSDLEFYVDG 60
Query: 85 FDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNK 144
DE D L LIKG G AL REKI+A A FI I D SK V LG LP+E+ +
Sbjct: 61 ADESDEHLNLIKGGGAALTREKIVAAVAKTFICIADGSKLVPVLGAFPLPVEVIPMARSH 120
Query: 145 TLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGV 204
G + R ++D GN I+D I +P + ++ I GV
Sbjct: 121 VARQ----LVKLGGDPVYREG------VLTDNGNIIIDVHNMSITNPVELEAQINAIVGV 170
Query: 205 IEHGLFINM-VDCAIIGTSDGECLV 228
+ +GLF D ++GT+DG +
Sbjct: 171 VTNGLFAARPADLLLLGTNDGVKTL 195
>gi|54296090|ref|YP_122459.1| ribose-5-phosphate isomerase A [Legionella pneumophila str. Paris]
gi|67461342|sp|Q5X8Y4|RPIA_LEGPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|53749875|emb|CAH11256.1| hypothetical protein lpp0108 [Legionella pneumophila str. Paris]
Length = 216
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
D M +G+GTGST F+ LA I + + SS+ TE + IP+ V +
Sbjct: 17 EDDMVIGVGTGSTVNFFIKELAA-IKHKIE-ACVASSKATEALLRAEGIPVIDLNSVQDL 74
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ +DG DE++ R +IKG GGAL REKI+A+ A++FI I DESK V LG + +E+
Sbjct: 75 PIYVDGADEVNERGEMIKGGGGALTREKIVANVATQFICIVDESKVVKRLGEFPVAVEVV 134
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGEL 198
+ + + G + E R FV+D GN I+D F P + L
Sbjct: 135 PMARSFVARQIVK----LGGDPEYREG------FVTDNGNIILDVFNLNFSTPMALEDSL 184
Query: 199 CNIPGVIEHGLFINM-VDCAIIGTSDGE 225
IPGV+E+G+F D ++ ++ G
Sbjct: 185 NVIPGVVENGVFAKRLADKVLVASASGV 212
>gi|52840349|ref|YP_094148.1| ribose-5-phosphate isomerase A [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|67461350|sp|Q5ZZB7|RPIA_LEGPH RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|52627460|gb|AAU26201.1| ribose-5-phosphate isomerase A [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 216
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
D M +G+GTGST F+ LA I + + SS+ TE + IP+ V +
Sbjct: 17 EDDMVIGVGTGSTVNFFIKELAA-IKHKIE-ACVASSKATEALLRAEGIPVIDLNSVQDL 74
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ +DG DE++ R +IKG GGAL REKI+A+ A++FI I DESK V LG + +E+
Sbjct: 75 PIYVDGADEVNERGEMIKGGGGALTREKIVANVATQFICIVDESKVVKRLGEFPVAVEVI 134
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGEL 198
+ + + G + E R FV+D GN I+D F P + L
Sbjct: 135 PMARSFVARQIVK----LGGDPEYREG------FVTDNGNIILDVFNLSFSTPMALEDSL 184
Query: 199 CNIPGVIEHGLFINM-VDCAIIGTSDGE 225
IPGV+E+G+F D ++ ++ G
Sbjct: 185 NVIPGVVENGVFAKRLADKVLVASASGV 212
>gi|268325557|emb|CBH39145.1| ribose 5-phosphate isomerase [uncultured archaeon]
Length = 228
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 123/226 (54%), Gaps = 8/226 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K AA A + DGM +G+GTGSTA+ + + ++I F + +P+S TE
Sbjct: 10 KEKAAESASSLISDGMVVGLGTGSTAEIVIREIGNRIKTEEFEIFGVPTSLRTEMVAIEC 69
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IP+ + + S+D+ IDG D++DS L LIKG G+ REKI+++AA + ++ +E K +
Sbjct: 70 GIPITTLSEHPSLDICIDGADQVDSELNLIKGGWGSHTREKIVSYAAKKLVICVEEEKIM 129
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+ L + +P+E+ + V +K+ G LR G V++ GN ++DA F
Sbjct: 130 EQLTK-PVPLEVLPYAVKIVEKQVKK----LGGEPALRSEGTRGGYSVTEHGNLVIDADF 184
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
G I +P+ +S L ++ G +EHG+F N +G G VL++
Sbjct: 185 GVIHNPEEMSTALSSVVGSLEHGIFTN-AAEVHVGNEKG-VRVLKR 228
>gi|195429262|ref|XP_002062682.1| GK19561 [Drosophila willistoni]
gi|194158767|gb|EDW73668.1| GK19561 [Drosophila willistoni]
Length = 245
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 122/235 (51%), Gaps = 14/235 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDG--MTLGMGTGSTAKEFMILLADKIA---NGFRVQVIPSSRN 57
Q K+ AAR A++ ++++G +G+G+GST + LA+++ + +P+S
Sbjct: 8 DQAKKLAARAAVEEWIIEGETKIVGIGSGSTIVYAVERLAERVWKDGELSDLICVPTSFQ 67
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ H++ L + +D++IDG DE+DSR+ IKG GG L++EKI+A A RF+V
Sbjct: 68 ARSLILDHNLNLGDLDRYPILDVAIDGADEVDSRMVCIKGGGGCLMQEKIVAACAKRFVV 127
Query: 118 IGDESKRVDFLGRGML---PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
+ D +K+ LG PIE+ ++ + FG LR+ + +G V+
Sbjct: 128 VADYTKKSLRLGEQWCKGVPIEVAPIAHVPI---KLKIEAMFGGEAHLRMAKAKAGPIVT 184
Query: 175 DGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
D GN+++D F D ++ + IPGV+E GLF+ M G +DG
Sbjct: 185 DNGNFLLDWKFVAKREYDWDEVNHAIKMIPGVMETGLFVGMAHKCYFGMADGNVK 239
>gi|195124123|ref|XP_002006543.1| GI18518 [Drosophila mojavensis]
gi|193911611|gb|EDW10478.1| GI18518 [Drosophila mojavensis]
Length = 242
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 13/238 (5%)
Query: 4 LQMKRNAARRAIQ-YV-VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNT 58
KR AA A+ YV D LG+G+GST + LA+++ G + +PSS
Sbjct: 8 DAAKRLAAETAVDQYVTEDTKVLGIGSGSTIVFVVQRLAERVWKEGTLPELICVPSSFQA 67
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
H++ L + +D+ IDG DE+DS L LIKG GG L++EKI+A A +++
Sbjct: 68 RQLILDHNLTLGDLDRNYKIDVYIDGADEVDSSLVLIKGGGGCLMQEKIVASCAKTVVIV 127
Query: 119 GDESKRV---DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D +KR +PIE+ ++E FG +LR+ +G V+D
Sbjct: 128 ADYTKRSLRLGEQWCKGIPIEVAPIAHVPVKHKIEE---LFGGEAQLRIALKKAGPIVTD 184
Query: 176 GGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN+++D F D ++ + IPGV+E GLF+NM G ++G V K
Sbjct: 185 NGNFLLDWRFVAKREYDWDEVNKAISMIPGVLETGLFVNMAHKCYFGMANGTLKVQSK 242
>gi|294654675|ref|XP_456735.2| DEHA2A09328p [Debaryomyces hansenii CBS767]
gi|218511765|sp|Q6BYI4|RPIA_DEBHA RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|199429061|emb|CAG84694.2| DEHA2A09328p [Debaryomyces hansenii]
Length = 252
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 15/238 (6%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
+ K++AA +A+ + +G+G+GST ++ + N +P+ ++
Sbjct: 21 VEKAKKSAAYQAVDENFPEGAKVVGVGSGSTVIYVAERISQ-LKNKESFVCVPTGFQSKQ 79
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ L + E VD++ DG DE+D+ L LIKG G L +EK++A AAS+F+++ D
Sbjct: 80 LIIDAGLRLGTIEQYPEVDIAFDGADEVDTELNLIKGGGACLFQEKLVAAAASKFVIVAD 139
Query: 121 ESKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG---SGLFV 173
KR R +PIEI K + G ++ LR+ G +G V
Sbjct: 140 FRKRSPSKLGIQWRKGVPIEIVPCAYAKV----SKDLEAMGAK-KVELRQGGSAKAGPVV 194
Query: 174 SDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+D N+++DA FG I DP + ++ + GV+E GLF+ M G GE K
Sbjct: 195 TDNNNFLIDADFGEIEDPAKLHTDIKQLVGVVETGLFVQMAYKTYFGEESGEVKCWSK 252
>gi|316974523|gb|EFV58009.1| ribose 5-phosphate isomerase A [Trichinella spiralis]
Length = 221
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 11/216 (5%)
Query: 20 DGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
G +G+G+GST + L NG + +PSS + +PL +
Sbjct: 1 SGQKIGIGSGSTVVYAVNQLGSLYKNGSIKDIICVPSSFQAMQLIINNKLPLGDLQQCPC 60
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML--PI 135
+D+ IDG DE+D L IKG GG L +EKI+ A +F +I D K+ LG PI
Sbjct: 61 LDICIDGADEVDENLNCIKGGGGCLTQEKIVMSCAKKFFIIADFRKQSRSLGEQWPFVPI 120
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPD----P 191
E+ + ++ + +G LR+ +G V+D GN+I+D F + +
Sbjct: 121 EVIPSAFQPIMQRIQ---NTYGGECNLRMALKKAGPVVTDNGNFIIDWKFPSVVNGNLSL 177
Query: 192 QIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
+ ++ ++ IPGV+E GLFI++V A G DG
Sbjct: 178 KQLNEKIIMIPGVVETGLFIDVVTKAYFGMKDGSVR 213
>gi|213401191|ref|XP_002171368.1| ribose-5-phosphate isomerase [Schizosaccharomyces japonicus yFS275]
gi|211999415|gb|EEB05075.1| ribose-5-phosphate isomerase [Schizosaccharomyces japonicus yFS275]
Length = 276
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Query: 6 MKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR A A+ +G+G+GST + L K V +P+ ++
Sbjct: 18 AKRQACHMAVDENLPKSAKVIGIGSGSTVVYVVERLLKKPG-IENVVFLPTGFQSKELIV 76
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + L P+ VD++ DG DE+D+ L IKG G L +EK+IA R +++ D K
Sbjct: 77 SNGLRLGDPDCYPDVDVAFDGADEVDANLNCIKGGGACLFQEKLIAVLTKRLVIVADSRK 136
Query: 124 RVDFLGRGML---PIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFVSDGGNY 179
+ LG + PIE+ L LK + +LR+ +G V+D GN+
Sbjct: 137 NSEKLGAYWVKGVPIEVVPMAYTFVLRELKRLGCK---EPKLRMGAPGKAGPLVTDNGNF 193
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+DA FG I P+ + ++ I GV+E G+F M+ A G DG V +
Sbjct: 194 IIDANFGLIDKPEELFKQIKLIIGVVEVGIFSQMIQSAYFGNPDGSVTVKK 244
>gi|328354554|emb|CCA40951.1| ribose 5-phosphate isomerase A [Pichia pastoris CBS 7435]
Length = 525
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 17/238 (7%)
Query: 4 LQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ K+ AA A+ +G+G+GST L + N + IP+S ++
Sbjct: 7 EKSKKLAAFAAVNENVSKSDRIIGVGSGSTVVYVAERLGQ-LENKEKFICIPTSFQSKQL 65
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + L + E+ +D++ DG DEID+ L LIKG G AL +EK++A + +F+V+ D
Sbjct: 66 ILDNGLRLGNVEEFDEIDVAFDGADEIDTNLNLIKGGGAALYQEKLVASLSRKFVVVADF 125
Query: 122 SKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR---RNGSGLFVS 174
K+ R +PIE+ K L + G N LR + +G V+
Sbjct: 126 RKQSPERLGHFWRKGVPIEVVPNSYVKVL----KDLFKLGAN-SATLRDAGKAKAGPVVT 180
Query: 175 DGGNYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D GN+++DA FG IP + + +L + GV+E G F++ + A IG DG L
Sbjct: 181 DNGNFVIDADFGEIPLNKVKELDEKLIRLVGVVETGFFVDYAEKAYIGNEDGSITSLS 238
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 12/236 (5%)
Query: 3 ALQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
Q K+ AA +A+ +G+G+GST L + + IP+ ++
Sbjct: 291 VEQSKKLAAYKAVDENLKDSHSVVGVGSGSTVVYVAERLGQ-LEHKSSFVCIPTGFQSKE 349
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L S E+ SS+D++ DG DEIDS+L LIKG G L++EK++A + + ++ D
Sbjct: 350 LILSNGLRLGSVEEYSSIDIAFDGADEIDSQLNLIKGGGACLMQEKLVASCSKQLFIVAD 409
Query: 121 ESKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN-GSGLFVSD 175
KR R +PIE+ NK L+ LK + + ++R +G V+D
Sbjct: 410 YRKRSPEKLGHAWRQGVPIEVVPAAYNKVLNDLKNL--EGYKSAKVRYGGTFKAGPVVTD 467
Query: 176 GGNYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+I+DA FG IP + ++ + GV+E GLF NM A IG DG L
Sbjct: 468 NSMFIIDADFGEIPVEKVSTLHSQIKGLVGVLETGLFANMTTAAYIGNEDGSVATL 523
>gi|302674234|ref|XP_003026802.1| hypothetical protein SCHCODRAFT_238402 [Schizophyllum commune H4-8]
gi|300100486|gb|EFI91899.1| hypothetical protein SCHCODRAFT_238402 [Schizophyllum commune H4-8]
Length = 297
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 7 KRNAARRAIQ-YVVDGM-TLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
K+ AA A+ +V M +G+G+GST + + + A +P+ ++
Sbjct: 52 KQLAAHSAVDEFVTPNMKIIGIGSGSTVPYVVERIVAQGAEANRDRIFVPTGFQSKALIL 111
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEID---SRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ L E +D++IDG DE+D L IKG G LREK++A AA ++V+ D
Sbjct: 112 NSKLNLGDVEQFGDIDVTIDGADEVDSIERGLNCIKGGGACQLREKVLAEAAKTWVVVAD 171
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
K D + +PIE+ F + LS L + S + +LR+ +G VSD G
Sbjct: 172 YRKNSDVLGTNFKPGVPIEVVPFAYLQVLSRLHHMGSP---DAKLRMAVAKAGPVVSDNG 228
Query: 178 NYIVDAFFGF--IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+I+DA F + DP + E+ I GV+E GLF M G DG V
Sbjct: 229 MFIIDAPFPPEKLEDPAKLLHEIKLITGVVEVGLFCKMARACYFGNEDGTVTV 281
>gi|320580559|gb|EFW94781.1| Ribose-5-phosphate ketol-isomerase [Pichia angusta DL-1]
Length = 471
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
+ K+ +A A+ + +G+G+GST + +N + +P+ +
Sbjct: 240 VEKSKKLSAYAAVDDNLLSTHRVIGIGSGSTVVYVAERVGQA-SNKSDLVCVPTGFQSRQ 298
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L S E+ +D++ DG DEID+ L LIKG G L +EK++A + + +V+ D
Sbjct: 299 LIIDNGLRLGSTEEYPEIDIAFDGADEIDTNLGLIKGGGACLFQEKLVAACSKQLVVVAD 358
Query: 121 ESKRVDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFVSDG 176
K LG+G +PIE+ K + G +R +G V+D
Sbjct: 359 YRKDTGVLGKGWRKGVPIEVVPAAYTKV----SLDLAKLGGKPVVRSGLPAKAGPVVTDN 414
Query: 177 GNYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
GN+I+D FG IP ++ ++ + GV+E GLF+ + A IG +DG
Sbjct: 415 GNFIIDCDFGEIPPAQVAELNAKIKALVGVVETGLFVGLASKAYIGNADGTIT 467
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 11/236 (4%)
Query: 1 MDALQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT 58
M K+NA+ A+ +G+G+G+T + LA R+ +P+S
Sbjct: 1 MSTENAKKNASYAAVDQNLDPSHQVVGIGSGTTIVYVVERLAQLDTER-RLVCVPTSFQA 59
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
H + L ++ +D++ DG DEIDS L LIKG G + EK++A A +FIV+
Sbjct: 60 RELILSHRLHLGRVDEYVDIDIAFDGADEIDSDLNLIKGGGACMFLEKLVASCARKFIVV 119
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL-RRNGSGLFVSDGG 177
D K +P+E+ + L+ G LR +G V+D G
Sbjct: 120 ADHRK-SSVALSRGVPLEVVSVAHKRVFLELER----LGGRPRLRDAGDRKAGPVVTDHG 174
Query: 178 NYIVDAFFGFI--PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N +VD FG I + ++ + GV+E G F M A IG DG V ++
Sbjct: 175 NLVVDCEFGEIRPERVAELDVKIKALVGVVETGFFPGMAHKAYIGLEDGTVRVQKR 230
>gi|225710990|gb|ACO11341.1| Ribose-5-phosphate isomerase [Caligus rogercresseyi]
Length = 236
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 119/232 (51%), Gaps = 9/232 (3%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENF 61
K+ AA ++ +V +G +G+G+GST + LA+++ A V IP+S
Sbjct: 6 EDSKKLAAISSVDNHVQNGHVVGIGSGSTIVYAVQRLAERVEAEKMSVSCIPTSFQARQL 65
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
H +P+ S E V S D++IDG DE D+ L LIKG GG L +EK++A + F+VI D
Sbjct: 66 IMEHGLPMTSFEAVESCDVTIDGCDEADASLTLIKGGGGCLAQEKVVAQFSKTFVVIADY 125
Query: 122 SKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
K+ +PIE+ + + G LR+ + +G V+D GN
Sbjct: 126 RKKSQKLGTSWKYVPIEVLPLAYKPVTKWISDH---HGGEAILRMAKAKAGPLVTDNGNL 182
Query: 180 IVDAFFG--FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I+D +F D + ++GELC++ G+++ GLFI+M A G DG +
Sbjct: 183 ILDWYFDLNKTYDWKKVNGELCSLAGIVDTGLFIDMTKTAYFGQKDGTVETV 234
>gi|332701470|ref|ZP_08421558.1| Ribose-5-phosphate isomerase A [Desulfovibrio africanus str. Walvis
Bay]
gi|332551619|gb|EGJ48663.1| Ribose-5-phosphate isomerase A [Desulfovibrio africanus str. Walvis
Bay]
Length = 246
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 122/224 (54%), Gaps = 8/224 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENF 61
+ KR AA A++ V DGM +G+G GSTA ++ +A + +G V +P SR E
Sbjct: 8 DKYKRLAAEMAVERVSDGMVVGLGHGSTAAYAVLRMAVLLRDGSLKDVLGVPCSRRVEEE 67
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ IPL + + S+DL IDG DEID L IKG GGALLREKI+A A+ R I++ D
Sbjct: 68 ARRLAIPLATLDARPSLDLVIDGADEIDPGLDCIKGKGGALLREKIVAQASKRRIIVADA 127
Query: 122 SKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK + LP+E+ F L + G +LR +G FV+ GN+I
Sbjct: 128 SKCSARLGEKASLPVEVLPFA----LVPERHFLESLGGKIKLRPGPDG-RPFVTAQGNFI 182
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+D + +P+ ++ +L + G++ HGLF+++VD I+ G
Sbjct: 183 LDWSQPPLDNPRELARKLESRAGIMAHGLFLDIVDEVIVAGPQG 226
>gi|195149818|ref|XP_002015852.1| GL10793 [Drosophila persimilis]
gi|198456585|ref|XP_002138261.1| GA24491 [Drosophila pseudoobscura pseudoobscura]
gi|194109699|gb|EDW31742.1| GL10793 [Drosophila persimilis]
gi|198135664|gb|EDY68819.1| GA24491 [Drosophila pseudoobscura pseudoobscura]
Length = 242
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 69/238 (28%), Positives = 121/238 (50%), Gaps = 13/238 (5%)
Query: 4 LQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIA---NGFRVQVIPSSRNT 58
+ K+ AAR A+ D +G+G+GST + +A+++ + +PSS
Sbjct: 8 DEAKKKAARTAVDEWVKEDTKIVGIGSGSTVVYAVQRIAERVWKDGELTDLICVPSSYQA 67
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
++ +++ L S + +D++IDG DE+DS + LIKG GG LL+EK++A + +FIV+
Sbjct: 68 QHLILDYNLNLGSVDRNPIIDVAIDGADEVDSNMVLIKGGGGCLLQEKVVAACSKKFIVV 127
Query: 119 GDESKRVDFLGRGML---PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
D +K+ LG PIE+ ++ + FG LR+ + +G ++D
Sbjct: 128 ADYTKKSLHLGEQWCRGVPIEVAPMAQVPIKLQIE---AMFGGEVVLRMAKVKAGPIITD 184
Query: 176 GGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN+++D F + ++ + IPGV+E GLF++M G +DG K
Sbjct: 185 NGNFLLDWKFVGKREYNWDEVNRTITMIPGVLETGLFVDMAHKCYFGMADGSVKAQSK 242
>gi|254573018|ref|XP_002493618.1| Ribose-5-phosphate ketol-isomerase [Pichia pastoris GS115]
gi|238033417|emb|CAY71439.1| Ribose-5-phosphate ketol-isomerase [Pichia pastoris GS115]
Length = 252
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 12/236 (5%)
Query: 3 ALQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
Q K+ AA +A+ +G+G+GST L + + IP+ ++
Sbjct: 18 VEQSKKLAAYKAVDENLKDSHSVVGVGSGSTVVYVAERLGQ-LEHKSSFVCIPTGFQSKE 76
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + L S E+ SS+D++ DG DEIDS+L LIKG G L++EK++A + + ++ D
Sbjct: 77 LILSNGLRLGSVEEYSSIDIAFDGADEIDSQLNLIKGGGACLMQEKLVASCSKQLFIVAD 136
Query: 121 ESKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN-GSGLFVSD 175
KR R +PIE+ NK L+ LK + + ++R +G V+D
Sbjct: 137 YRKRSPEKLGHAWRQGVPIEVVPAAYNKVLNDLKNL--EGYKSAKVRYGGTFKAGPVVTD 194
Query: 176 GGNYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+I+DA FG IP + ++ + GV+E GLF NM A IG DG L
Sbjct: 195 NSMFIIDADFGEIPVEKVSTLHSQIKGLVGVLETGLFANMTTAAYIGNEDGSVATL 250
>gi|11498548|ref|NP_069776.1| ribose 5-phosphate isomerase (rpi) [Archaeoglobus fulgidus DSM
4304]
gi|6226028|sp|O29319|RPIA_ARCFU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|2649655|gb|AAB90297.1| ribose 5-phosphate isomerase (rpi) [Archaeoglobus fulgidus DSM
4304]
Length = 225
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 126/220 (57%), Gaps = 10/220 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K NAA+ A++ V DGM LG+G+GST + F+ LL DKI G + IPSS + +
Sbjct: 6 KYNAAKLALELVKDGMVLGIGSGSTVEVFLNLLGDKIREEGLEIYGIPSSYQSYFAAIRN 65
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+ + + DL IDG D++D++L IKG GGA+ REKI+A A+ + ++I DESK V
Sbjct: 66 GVEIVDLVEF-EPDLCIDGADQVDAKLNCIKGGGGAMTREKIVAKASRKVVIIVDESKLV 124
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+ L +P+E+ F L +++ G LR + G ++D GN++VD F
Sbjct: 125 EKL-SMPVPVEVLPFAYGWVLREIEK----MGCKARLREGKGKIGPVITDNGNFVVDCDF 179
Query: 186 GFIPD--PQIISGELCNIPGVIEHGLFIN-MVDCAIIGTS 222
G I + + + GE+ I GV+E+G+F ++D I G+S
Sbjct: 180 GVIEEDRVEGLEGEIKLISGVVENGIFSKELIDAVIAGSS 219
>gi|325474192|gb|EGC77380.1| ribose-5-phosphate isomerase A [Treponema denticola F0402]
Length = 239
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 120/241 (49%), Gaps = 18/241 (7%)
Query: 1 MDALQMKRNAARRAIQ------YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVI 52
MD Q+K A AI + DGM +G+GTGSTA + LA +++G ++ +
Sbjct: 1 MDTSQLKERVAYHAIDTLFSEGKIFDGMKIGLGTGSTAMPAVHRLAQLLSSGKLKKIYAV 60
Query: 53 PSSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
P+S T C+ IP++S S+DL+IDG DEID LIKG G ALL+EKIIA
Sbjct: 61 PTSFQTSIECEKLGIPIYSLSSQQIGGSLDLAIDGADEIDPDKNLIKGGGAALLKEKIIA 120
Query: 110 HAASRFIVIGDESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG 168
+ + F+VI DE K+V +G+ LPIEI A G+ LR
Sbjct: 121 YNSKEFVVIADERKKVKSMGKGFALPIEIIPEARLSITKA----LEAKGIEVFLREGVKK 176
Query: 169 SGLFVSDGGNYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
G V+D GN+I+D + DP+++ L I GV+E+G F I DG
Sbjct: 177 MGPVVTDNGNFIIDVKWPEAADVDPKVLEESLNKITGVVENGFFTKNTPRVFIVHQDGNI 236
Query: 227 L 227
Sbjct: 237 E 237
>gi|147812715|emb|CAN61747.1| hypothetical protein VITISV_043784 [Vitis vinifera]
Length = 237
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 27/229 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++K+ AA +A++YV GM LG+GTGSTAK + + + + G +
Sbjct: 22 TQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNI---------- 71
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
V + D +D L L+KG GG+LLREK++ A +F+VI DE
Sbjct: 72 -------------VGIPTIEDDPRTSVDPYLNLVKGRGGSLLREKMVEGACKKFVVIVDE 118
Query: 122 SKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK V++LG +P+EI F T L+ + G +LR +NG FV+D NY
Sbjct: 119 SKLVNYLGGSGLAMPVEIVPFCWKFTAQRLQMLFEESGCVAKLRTYQNGE-PFVTDNMNY 177
Query: 180 IVDAFFGF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
IVD +F I D ++ S + + GV+EHG+FI+M I+ G +
Sbjct: 178 IVDLYFKREIGDLKVASDAILRLAGVVEHGMFIDMATTLIVAGECGVIV 226
>gi|93006288|ref|YP_580725.1| ribose-5-phosphate isomerase A [Psychrobacter cryohalolentis K5]
gi|92393966|gb|ABE75241.1| ribose-5-phosphate isomerase [Psychrobacter cryohalolentis K5]
Length = 219
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 17/219 (7%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
++Y+ D M LG+GTGST + LL G + SS+ TE+ + I +
Sbjct: 16 LRYIEDDMILGVGTGSTVNCLIELLPTVKLAG----AVASSQVTEDRLRALGIEIVDLNF 71
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GML 133
+D+ IDG DE+++ L+LIKG GGAL REKI+A A+++F+ + D SK V+ LGR +
Sbjct: 72 AGQLDVYIDGADEVNAHLQLIKGGGGALTREKIVAAASNKFVCMVDASKSVEILGREFPV 131
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQI 193
PIE+ + L ++ E+ FV+D GN I+D + + +P
Sbjct: 132 PIEVLPQARSYVARELAKMGGEPVYRED----------FVTDYGNVILDTYDLDVSNPIA 181
Query: 194 ISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
+ +L NI GV+ +G+F N D + +S+G VL +
Sbjct: 182 LEQQLNNIVGVVCNGIFAANQADVLLKASSNG-VEVLTR 219
>gi|41033691|emb|CAF18512.1| ribose-5-phosphate isomerase [Thermoproteus tenax]
Length = 226
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 11/230 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
MK AR+A +Y+ +G +G+G+GSTAK F+ LA ++ G V ++ +S ++E
Sbjct: 1 MKHLLARKAAEYIREGSIVGLGSGSTAKAFIEELAKRVREDGLTVTLVSTSVDSELKAAE 60
Query: 65 HHIPLH--SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ + V +D+++DG DE+ +KG GGA+ REK++ + AS I+I +
Sbjct: 61 VGLDKYLAPLWAVDRIDIAVDGADELTRDRLFLKGGGGAMFREKVVDYRASTLIIIAESH 120
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS--GLFVSDGGNY 179
K VD R +PIE+ ++ +G LR+ + G G V+D GNY
Sbjct: 121 KLVDRIPARHPIPIEVLPAAWRLVA---DDIVKRWGGKAVLRVCQCGGKLGPLVTDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVD-CAIIGTSDGECLV 228
I+D DP + EL IPGVIE G+F D ++ G +
Sbjct: 178 ILDWAPPGPIDP-ALEDELRGIPGVIESGIFSKRRDAVVLLADERGVFEL 226
>gi|116515188|ref|YP_802817.1| hypothetical protein BCc_259 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116257042|gb|ABJ90724.1| ribose 5-phosphate isomerase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 218
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 13/227 (5%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+K++ A+ A+ Y+ +G+G+GST + F+ L +N V+ SS+ +E K
Sbjct: 3 DTLKKSVAKYALSYIKKNSIIGIGSGSTIEFFIKELYTIFSN--IQGVVVSSKKSEKLLK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IP++ + ++D+ ID D+++S L +IKG GGAL REKIIA AA RF+ I D+SK
Sbjct: 61 KINIPIYDLNSIQNLDIYIDSADQVNSSLEMIKGGGGALTREKIIASAAKRFLCIIDKSK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ +PIE+ + + + G + R F++D GNYI+DA
Sbjct: 121 YVNTFNNFPIPIEVIPMSLMFVSREILK----MGGFVKYRKN------FITDNGNYIIDA 170
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVL 229
+ + P + + NIPGV+ GLF I D +I S+ ++
Sbjct: 171 YNLNVIYPTNLEKIINNIPGVVSVGLFCIRKADTLLISYSNYVRTII 217
>gi|326403460|ref|YP_004283541.1| ribose 5-phosphate isomerase/glucokinase [Acidiphilium multivorum
AIU301]
gi|325050321|dbj|BAJ80659.1| ribose 5-phosphate isomerase/glucokinase [Acidiphilium multivorum
AIU301]
Length = 424
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 87/224 (38%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
KR AAR A+ V GM +G+GTGSTA F+ L ++ G ++ + +S T +
Sbjct: 9 KRAAARLAVGLVESGMRVGLGTGSTAAHFIDQLGARVRAEGLDIECVATSDLTAARAEFL 68
Query: 66 HIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ L + S+DL++DG DE++ LRLIKG GGALLREK++A +A RF+VI D SK
Sbjct: 69 GLRLVPLD--GSLDLAVDGADEVEFGTLRLIKGLGGALLREKLVAQSARRFVVIADRSKL 126
Query: 125 VD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LP+EI + G ++T + L E+ LR N FVSDGG++I D
Sbjct: 127 VTRLGAHSKLPVEIVRHGADRTCARLAELDLA------PVLRANAGSPFVSDGGHFIADC 180
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
P+ + L +I GV+ GLF++ CAIIG DG
Sbjct: 181 TMPKGIVPEAVESALRSIAGVVGTGLFLSGSACAIIGYPDGSTR 224
>gi|328774402|gb|EGF84439.1| hypothetical protein BATDEDRAFT_22493 [Batrachochytrium
dendrobatidis JAM81]
Length = 229
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 1 MDAL---QMKRNAARRAIQY--VVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIP 53
M A Q K+ A+ RAI +G+G+GST + LA++ I
Sbjct: 1 MSADLVEQAKQLASFRAIDERVSTSTKVIGIGSGSTIVYAVQRLAERFKQESLPIQACIA 60
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAAS 113
+S + +PL +D++ DG DEID+ L IKG G L+EK++A A
Sbjct: 61 TSFQAQQLILEAGLPLVI------IDVAFDGADEIDTSLNCIKGGGACHLQEKLVASNAK 114
Query: 114 RFIVIGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG 170
F ++ D K + +PIE+ A+ + G LR+ +G
Sbjct: 115 LFYLVADHRKDSKVLGTQWKQGVPIEVTPM----VYVAVMQKIKTMGGKPTLRMAAKKAG 170
Query: 171 LFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
V+D GN+++DA FG I DP ++ +L +PG++E GLF NMV+ G DG
Sbjct: 171 PVVTDNGNFVIDADFGEICDPAALNVQLIGVPGIVETGLFCNMVNGVYFGLPDGTVK 227
>gi|170597012|ref|XP_001902978.1| ribose 5-phosphate isomerase [Brugia malayi]
gi|158588997|gb|EDP28172.1| ribose 5-phosphate isomerase, putative [Brugia malayi]
Length = 260
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 14/227 (6%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPE 73
Q+V G +G+G+G+TAK + LA+K+ +G + +PSS +T + + + + E
Sbjct: 21 QHVKSGCRIGVGSGTTAKFLVEFLAEKVNDGTVKDIICVPSSFSTRQWLIDYGLQVIDLE 80
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKG-YGGALLREKIIAHAASRFIVIGDESKRVDF--LGR 130
+ +DL IDG DE+D L IKG GG L +EKI+ A +F +I D SK+ +
Sbjct: 81 KILDLDLCIDGADEVDINLNCIKGSGGGCLTQEKIVQTCAKKFYIIADASKQSEKLGDRN 140
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFVSDGGNYIVDAFFGF-- 187
+PIE+ FG L+ +K G ELR + F++D N+I+D F
Sbjct: 141 FPIPIEVVPFGYAPVLNWIKRQE---GGEVELRTNSKEKLDPFITDNNNFILDWNFPKNK 197
Query: 188 ---IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L ++PGV+E GLFI + + A T+DG +
Sbjct: 198 YVTTEDLSALHTRLKSLPGVVETGLFIGVAEKAYFATADGNVTERLR 244
>gi|148260275|ref|YP_001234402.1| ribose 5-phosphate isomerase [Acidiphilium cryptum JF-5]
gi|146401956|gb|ABQ30483.1| ribose 5-phosphate isomerase [Acidiphilium cryptum JF-5]
Length = 424
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 87/224 (38%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
KR AAR A+ V GM +G+GTGSTA F+ L ++ G ++ + +S T +
Sbjct: 9 KRAAARLAVGLVESGMRVGLGTGSTAAHFIDQLGARVRAEGLDIECVATSDLTAARAEFL 68
Query: 66 HIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ L + S+DL++DG DE++ LRLIKG GGALLREK++A +A RF+VI D SK
Sbjct: 69 GLRLVPLD--GSLDLAVDGADEVEFGTLRLIKGLGGALLREKLVAQSARRFVVIADRSKL 126
Query: 125 VD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LP+EI + G ++T + L E+ LR N FVSDGG++I D
Sbjct: 127 VTRLGAHSKLPVEIVRHGADRTCARLAELDLA------PVLRANAGSPFVSDGGHFIADC 180
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
P+ + L +I GV+ GLF++ CAIIG DG
Sbjct: 181 TMPKGIVPEAVESALRSIAGVVGTGLFLSGSACAIIGYPDGSTR 224
>gi|163856267|ref|YP_001630565.1| ribose-5-phosphate isomerase A [Bordetella petrii DSM 12804]
gi|229564295|sp|A9IJV4|RPIA_BORPD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|163259995|emb|CAP42296.1| rpiA [Bordetella petrii]
Length = 225
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 2 DALQMKRNAARRAIQYVVD----GMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++K+ AA A+ + + +G+GTGSTA F+ LA + + R V S R+
Sbjct: 3 TQQELKQQAADAALALIEPLLGPDVIIGVGTGSTADLFIDGLA-RYRDRLRGTVASSERS 61
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
H I + DV+S+ + +DG DEID+RL +IKG GGA REKI+A A R+I
Sbjct: 62 AARL-AGHGITVLDLNDVTSMPVYVDGADEIDARLHMIKGGGGAQTREKIVASVADRYIC 120
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I DESK V+ LG LP+E+ A G LR F +D G
Sbjct: 121 IVDESKLVERLGSFPLPVEVIPMARQAVARA----LVALGGQPRLREG------FTTDNG 170
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
N I+D I D + + N+PGV+ GLF D A++ T +G +
Sbjct: 171 NIILDVAGLQIDDAPALELTVNNLPGVVTCGLFARPGADVALLATQNGIRRL 222
>gi|145590452|ref|YP_001152454.1| ribose 5-phosphate isomerase [Pyrobaculum arsenaticum DSM 13514]
gi|145282220|gb|ABP49802.1| ribose-5-phosphate isomerase [Pyrobaculum arsenaticum DSM 13514]
Length = 223
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR A++ V GM +G+G+G+TA+EF+ LA+ +G V ++P+S ++E +
Sbjct: 3 KATLAREAVKLVKPGMVVGLGSGTTAREFIKALAEARIDG--VVLVPTSVDSEILAQEVG 60
Query: 67 I--PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ L V VDL++DG DE+ ++KG GGALLREKI+ +AA F+V+ +E K
Sbjct: 61 LGNALRPMWAVDHVDLAVDGADEVTRDKLILKGRGGALLREKIVDYAADMFVVLIEEHKL 120
Query: 125 VDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V+ + + +PIE+ + ++ FG + LR G V+D GNYIVD
Sbjct: 121 VERIPKASPVPIEVVPWAWRFVARRIER---EFGGSARLRTGEGKLGPVVTDNGNYIVDW 177
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVD-CAIIGTSDGEC 226
D L +PGV+E G+F D ++ DG
Sbjct: 178 TPPGPLDASA-EDRLKAVPGVVESGIFSKRRDAVVLVARRDGTI 220
>gi|172057202|ref|YP_001813662.1| ribose 5-phosphate isomerase [Exiguobacterium sibiricum 255-15]
gi|229564309|sp|B1YEE3|RPIA_EXIS2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|171989723|gb|ACB60645.1| ribose 5-phosphate isomerase [Exiguobacterium sibiricum 255-15]
Length = 232
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 7/215 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
Q K+ A AI+ V +GM LG+GTGST + F+ L + + G VQ + +S T K
Sbjct: 3 EQEKKMLAEAAIKQVKNGMILGLGTGSTTRSFIDALGEWVKAGGEVQGVATSNETVEQAK 62
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+IPL S E+ + +DL IDG D+ID R R++KG GGAL REK++A + + + D SK
Sbjct: 63 RLNIPLLSLEEATHIDLVIDGIDQIDPRFRVLKGGGGALFREKVVALMSREILYLADASK 122
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V L G LP+EID F L++ ++ LR + FV+DGG+ I+D
Sbjct: 123 FVHHL-TGPLPVEIDAFARPYVERYLRDKQL------DVTLREHDGQPFVTDGGHLILDV 175
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAI 218
+ D + + EL ++ GV+E G F D +
Sbjct: 176 DLERVQDVRHFAQELKSLTGVLETGYFERQPDHVL 210
>gi|226952006|ref|ZP_03822470.1| ribose-5-phosphate isomerase A [Acinetobacter sp. ATCC 27244]
gi|226837243|gb|EEH69626.1| ribose-5-phosphate isomerase A [Acinetobacter sp. ATCC 27244]
Length = 223
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS T K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSNATAERLKELGIEVVDMNSVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +FI I D+SK V+ LGR LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFICIVDDSKWVEQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D + I +P +
Sbjct: 137 EVIPMARSAVARK----IVALGGDPVYREG------VVTDNGNVILDVYNLNILNPIELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
L NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTLNNIPGVVTNGIFALNAATIAIVATNNGIEE 219
>gi|126459276|ref|YP_001055554.1| ribose-5-phosphate isomerase [Pyrobaculum calidifontis JCM 11548]
gi|126248997|gb|ABO08088.1| ribose-5-phosphate isomerase [Pyrobaculum calidifontis JCM 11548]
Length = 222
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 10/228 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK A A++YV GM +G+G+G+TA+EF+ LA + ++ +S ++E
Sbjct: 1 MKHLLATHALRYVKGGMVIGLGSGTTAREFIKALAAL--RHLDLTLVATSADSEVVAYEV 58
Query: 66 --HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
L V +DL++DG DE+ ++KG GGALLREK++ +AA +F+V+ + K
Sbjct: 59 GLGDRLRPMWAVDKIDLAVDGADEVTRGKLMLKGRGGALLREKVVDYAAEKFVVLVERHK 118
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD R +P+E+ + +++ FG + LR G V+D GNYIVD
Sbjct: 119 VVDFIPARNPVPVEVLPWAWRHVARQIEK---KFGGSTALRTGEGKLGPVVTDNGNYIVD 175
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVD-CAIIGTSDGECLVL 229
D + + EL IPGV+E G+F D ++ G L
Sbjct: 176 WRPEGPID-ERVEDELKQIPGVLETGIFSKRKDAVVLVADEKGTVEEL 222
>gi|294650484|ref|ZP_06727843.1| ribose-5-phosphate isomerase [Acinetobacter haemolyticus ATCC
19194]
gi|292823627|gb|EFF82471.1| ribose-5-phosphate isomerase [Acinetobacter haemolyticus ATCC
19194]
Length = 223
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS T K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSNATAERLKELGIEVVDMNSVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK V+ LGR LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVEQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D + I +P +
Sbjct: 137 EVIPMARSAVARK----IVALGGDPVYREG------VVTDNGNVILDVYNLNILNPIELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
L NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTLNNIPGVVTNGIFALNAATIAIVATNNGIEE 219
>gi|320536897|ref|ZP_08036889.1| ribose 5-phosphate isomerase A [Treponema phagedenis F0421]
gi|320146253|gb|EFW37877.1| ribose 5-phosphate isomerase A [Treponema phagedenis F0421]
Length = 243
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 87/238 (36%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 4 LQMKRNAARRAIQ-YVV-----DGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSS 55
+ K+ A+ AI + GM +G+GTGSTA + LA+ I G + +PSS
Sbjct: 8 DEQKQIVAKHAIDTLIKEGKIFSGMKIGLGTGSTAMPAVKRLAEYIQKGKLKNIAAVPSS 67
Query: 56 RNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
T C+ +IP+ S +DL+IDG DEIDS+ LIKG G ALLREKI+A+ +
Sbjct: 68 FQTSIACEEFNIPIFSLSSGRINGELDLTIDGADEIDSKKNLIKGGGAALLREKIMAYNS 127
Query: 113 SRFIVIGDESKRVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL 171
F++IGDESK+V LG LPIEI + +G++ LR G
Sbjct: 128 KSFVIIGDESKQVKTLGTGFPLPIEIAPEARLSIMKK----LESWGVSMVLRDGIRKKGP 183
Query: 172 FVSDGGNYIVDAFFG--FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
V+D GN+I+D + +P EL IPGVIE+G F I + GE
Sbjct: 184 VVTDNGNFILDIKWPAQAKTNPSKFEKELNAIPGVIENGFFTENPPRVFIANAGGEVK 241
>gi|133712453|gb|ABO37066.1| RpiA [Treponema paraluiscuniculi]
Length = 283
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 18/243 (7%)
Query: 2 DALQMKRNAARRAIQ-YVVDG-----MTLGMGTGSTAKEFMILLADKIANG--FRVQVIP 53
D K A+R++ V +G M++G+GTGSTA + +AD +A G + +P
Sbjct: 42 DVTAQKLLVAQRSVDTLVQEGVLHAHMSIGLGTGSTAMPAVKRIADHLARGTLSDIAAVP 101
Query: 54 SSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+S T C+ ++IPL S +D++IDG DEID++ +IKG G ALL+EKI A+
Sbjct: 102 TSFQTALICERYNIPLFSLSSKRVGGKLDVTIDGADEIDTQNFVIKGGGAALLQEKIAAY 161
Query: 111 AASRFIVIGDESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS 169
++ F++I DE+K V+ R LPIE+ + +GL+ +R
Sbjct: 162 NSAHFVIIVDETKVVETLGTRAALPIEVVPEARMSVMR----TLQDWGLSVHIREAVRKK 217
Query: 170 GLFVSDGGNYIVDAFFGFIPD--PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
G V+D GN+I+DA + +P PQ + L +PGVIE+GLF + +DG
Sbjct: 218 GPVVTDHGNFILDARWQSLPTRTPQDMERALNALPGVIENGLFTERTVRVFVAHADGSVE 277
Query: 228 VLQ 230
Sbjct: 278 ERS 280
>gi|257455414|ref|ZP_05620649.1| ribose 5-phosphate isomerase A [Enhydrobacter aerosaccus SK60]
gi|257447376|gb|EEV22384.1| ribose 5-phosphate isomerase A [Enhydrobacter aerosaccus SK60]
Length = 229
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 74/223 (33%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPED 74
++Y+ GM LG+GTGST + LL G + SS+ TE+ K I +
Sbjct: 21 LKYIESGMILGVGTGSTVNCLIELLPKVNLKG----AVASSKVTEDKLKALGIEVMDLNF 76
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRGML 133
+DL IDG DE++ L+L+KG GGAL REKI+A A+ +FI + DESK V L
Sbjct: 77 TGELDLYIDGADEVNEHLQLVKGGGGALTREKIVAAASKQFICMVDESKWVQQLGVGFPL 136
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF----FGFIP 189
PIE+ + G R FV+D GN I+D + I
Sbjct: 137 PIEVLPQARSYVARE----LVQLGGEPVYREG------FVTDYGNLILDVYGLDIGLDIE 186
Query: 190 DPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLVLQK 231
+L NI GV+ +GLF D ++ T+DG + K
Sbjct: 187 KVAAFEAKLNNIVGVVCNGLFSARRADILLMATADGVKKLTAK 229
>gi|119872703|ref|YP_930710.1| ribose 5-phosphate isomerase [Pyrobaculum islandicum DSM 4184]
gi|119674111|gb|ABL88367.1| ribose-5-phosphate isomerase [Pyrobaculum islandicum DSM 4184]
Length = 223
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 10/225 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+K AR A++Y+ GMT+G+G+G+TA+EF+ LA+ V ++ +S ++E
Sbjct: 2 LKTILAREAVKYIESGMTVGLGSGTTAREFVKALAEFGPR--DVVLVATSIDSELLAIEV 59
Query: 66 --HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
L V ++D+++DG DE L+KG GGALLREKI+ + A RF+V+ +E K
Sbjct: 60 GLGDRLRPLWAVETIDIAVDGADEATRDKVLLKGRGGALLREKIVDYLARRFVVLVEEYK 119
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V R +PIE+ + A+K+ +G +LR G V+D GNYI+D
Sbjct: 120 VVQYIPTRNPIPIEVVPWAWRHVAKAIKDR---YGGVAKLRQDGGKLGPVVTDNGNYIID 176
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVD-CAIIGTSDGEC 226
P + EL IPGV+E G+F D I+ +
Sbjct: 177 WEPSAPIQPS-LEDELKLIPGVVETGIFSKRRDAIVIVARENSSV 220
>gi|119719244|ref|YP_919739.1| ribose 5-phosphate isomerase [Thermofilum pendens Hrk 5]
gi|119524364|gb|ABL77736.1| ribose-5-phosphate isomerase [Thermofilum pendens Hrk 5]
Length = 223
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 10/228 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKI 64
MK NAAR A ++V DGM +G+G+G+T K F+ +LA+++ + + SS +T +
Sbjct: 1 MKLNAAREAARHVRDGMVVGLGSGTTVKIFIDVLAERVRQENLTIFFVSSSIDTSLYAAG 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ + + ++S DG D + LIKG GG LLREKI+ + + ++VI D +K
Sbjct: 61 KGLLEVPLHEYT-PEVSFDGADTVLPDRSLIKGGGGCLLREKIVDYYSKEYVVIVDATKV 119
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR---RNGSGLFVSDGGNYIV 181
+ +P+E+ K + L++ + LR + G ++D GN+I+
Sbjct: 120 AETPRNLNVPVEVHPQAFKKVMEELRKS----YGAVNVTLRTYEKGKLGPVLTDNGNFIL 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
DA F + DP + L ++PG+IE G+F + I+G G ++
Sbjct: 176 DALFDELKDPLRLELSLKSVPGLIETGIFSVKKPSKIIVGYLHGVQVI 223
>gi|49484550|ref|YP_041774.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
MRSA252]
gi|82751929|ref|YP_417670.1| ribose-5-phosphate isomerase A [Staphylococcus aureus RF122]
gi|257423819|ref|ZP_05600248.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426499|ref|ZP_05602901.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429138|ref|ZP_05605525.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
68-397]
gi|257431784|ref|ZP_05608147.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
E1410]
gi|257434744|ref|ZP_05610795.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
M876]
gi|258423709|ref|ZP_05686596.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9635]
gi|282902243|ref|ZP_06310136.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
C160]
gi|282906677|ref|ZP_06314525.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909652|ref|ZP_06317461.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911897|ref|ZP_06319693.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915190|ref|ZP_06322967.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
M899]
gi|282917685|ref|ZP_06325436.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
D139]
gi|282920916|ref|ZP_06328634.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
C427]
gi|282925822|ref|ZP_06333470.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
C101]
gi|283767426|ref|ZP_06340341.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
H19]
gi|283959115|ref|ZP_06376556.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293497589|ref|ZP_06665443.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
58-424]
gi|293511167|ref|ZP_06669864.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
M809]
gi|293549774|ref|ZP_06672446.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428916|ref|ZP_06821540.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297589590|ref|ZP_06948231.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
MN8]
gi|56749546|sp|Q6GE99|RPIA_STAAR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|49242679|emb|CAG41402.1| putative ribose 5-phosphate isomerase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|82657460|emb|CAI81902.1| ribose 5-phosphate isomerase A [Staphylococcus aureus RF122]
gi|257272837|gb|EEV04939.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276130|gb|EEV07581.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279619|gb|EEV10206.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
68-397]
gi|257282663|gb|EEV12795.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
E1410]
gi|257285340|gb|EEV15456.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
M876]
gi|257846101|gb|EEV70128.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9635]
gi|282312651|gb|EFB43055.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
C101]
gi|282315331|gb|EFB45715.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
C427]
gi|282318440|gb|EFB48799.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
D139]
gi|282320911|gb|EFB51245.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
M899]
gi|282323593|gb|EFB53909.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326226|gb|EFB56530.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329576|gb|EFB59097.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596702|gb|EFC01661.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
C160]
gi|283461305|gb|EFC08389.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
H19]
gi|283471557|emb|CAQ50768.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
ST398]
gi|283788707|gb|EFC27534.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290918821|gb|EFD95897.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096520|gb|EFE26778.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
58-424]
gi|291466154|gb|EFF08683.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
M809]
gi|295127265|gb|EFG56907.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297578101|gb|EFH96814.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
MN8]
gi|298695594|gb|ADI98816.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
ED133]
gi|312437249|gb|ADQ76320.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193596|gb|EFU23992.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
CGS00]
gi|323439982|gb|EGA97697.1| ribose-5-phosphate isomerase A [Staphylococcus aureus O11]
gi|323443705|gb|EGB01318.1| ribose-5-phosphate isomerase A [Staphylococcus aureus O46]
gi|329730355|gb|EGG66745.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
21193]
Length = 228
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
D +K + + MTLG+GTGST + + +A I G+ + + +S
Sbjct: 3 DVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +DL+IDG DE+D L +IKG GGAL REK+I ASRF+V+ D
Sbjct: 63 LAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K V LP+E+D+F L ++ A ++ R N F++D GNY
Sbjct: 123 ETKMVQYLGETFKLPVEVDKFNWYHILRKIESYADI-----KVERRVNEDVAFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP L ++ GV E G F++M D I+GT +G +L+K
Sbjct: 178 ILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEG-VKILEK 228
>gi|71026128|ref|XP_762752.1| ribose 5-phosphate epimerase [Theileria parva strain Muguga]
gi|68349704|gb|EAN30469.1| ribose 5-phosphate epimerase, putative [Theileria parva]
Length = 363
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 11/239 (4%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
+ L + + A +A+ YV + +GTG T+ + LA+ I + IP+S+ T
Sbjct: 5 NQLSLMKLVAEKAVDTYVKSNSIIALGTGRTSTFALERLANHIKTKSITNILGIPTSQAT 64
Query: 59 ENFCKIHHIPLHSPEDV----SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
K IPL S ++V ++++IDG D +DS L LIKG GGAL E ++ + +
Sbjct: 65 YLKAKELEIPLISLDEVIGSDRRINIAIDGADSVDSDLNLIKGGGGALFTEFMVEQYSDQ 124
Query: 115 FIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLF 172
I++ DESK + L LPIEI + T + +N +R+ +GS LF
Sbjct: 125 LIIMIDESKLCNDHLLESHYLPIEIVKGCHLTTCKQIYSKFKSQIVNWSVRMNSDGS-LF 183
Query: 173 VSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++D GN I+D F P + +L I GV+ GLF+NM ++ SD + L++
Sbjct: 184 LTDNGNVIMDTQFKQTP-LDQLQKDLKLIHGVVCSGLFLNMATKCLVAKSDNTIVTLEQ 241
>gi|255320460|ref|ZP_05361641.1| ribose 5-phosphate isomerase A [Acinetobacter radioresistens SK82]
gi|262378356|ref|ZP_06071513.1| ribose 5-phosphate isomerase A [Acinetobacter radioresistens SH164]
gi|255302432|gb|EET81668.1| ribose 5-phosphate isomerase A [Acinetobacter radioresistens SK82]
gi|262299641|gb|EEY87553.1| ribose 5-phosphate isomerase A [Acinetobacter radioresistens SH164]
Length = 223
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS T K I + V
Sbjct: 21 HLPRGGILGVGTGSTVNFLIELLPELQLE----AAVASSNATAERLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK V+ LGR LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVEQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R ++D GN I+D + I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VITDNGNVILDVYNLNILNALELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F IN D AI+ T++G
Sbjct: 187 KTINNIPGVVTNGIFAINKADIAIVATNNGIEE 219
>gi|15925326|ref|NP_372860.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927916|ref|NP_375449.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
N315]
gi|21283985|ref|NP_647073.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
MW2]
gi|49487118|ref|YP_044339.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
MSSA476]
gi|87159890|ref|YP_494918.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196254|ref|YP_501073.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148268774|ref|YP_001247717.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
JH9]
gi|150394841|ref|YP_001317516.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
JH1]
gi|151222449|ref|YP_001333271.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980651|ref|YP_001442910.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510528|ref|YP_001576187.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141270|ref|ZP_03565763.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253314677|ref|ZP_04837890.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253730004|ref|ZP_04864169.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|255007113|ref|ZP_05145714.2| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794679|ref|ZP_05643658.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9781]
gi|258408717|ref|ZP_05681001.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A9763]
gi|258422315|ref|ZP_05685227.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9719]
gi|258439705|ref|ZP_05690451.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A9299]
gi|258442738|ref|ZP_05691298.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A8115]
gi|258446562|ref|ZP_05694717.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A6300]
gi|258450320|ref|ZP_05698412.1| ribose-5-phosphate isomerase [Staphylococcus aureus A6224]
gi|258452776|ref|ZP_05700772.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A5948]
gi|258455307|ref|ZP_05703267.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A5937]
gi|262049800|ref|ZP_06022664.1| hypothetical protein SAD30_0146 [Staphylococcus aureus D30]
gi|262052108|ref|ZP_06024317.1| hypothetical protein SA930_1575 [Staphylococcus aureus 930918-3]
gi|269203967|ref|YP_003283236.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
ED98]
gi|282893777|ref|ZP_06302009.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A8117]
gi|282925220|ref|ZP_06332879.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9765]
gi|282926885|ref|ZP_06334512.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A10102]
gi|284025360|ref|ZP_06379758.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
132]
gi|294848874|ref|ZP_06789619.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9754]
gi|295405018|ref|ZP_06814831.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A8819]
gi|296275423|ref|ZP_06857930.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
MR1]
gi|297209849|ref|ZP_06926245.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244075|ref|ZP_06927965.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A8796]
gi|300910860|ref|ZP_07128310.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379525|ref|ZP_07362259.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54039268|sp|P66695|RPIA_STAAN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|54039269|sp|P66696|RPIA_STAAW RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|54042182|sp|P66694|RPIA_STAAM RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|56749499|sp|Q6G6Y5|RPIA_STAAS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|13702136|dbj|BAB43428.1| SA2127 [Staphylococcus aureus subsp. aureus N315]
gi|14248110|dbj|BAB58498.1| similar to ribose 5-phosphate isomerase [Staphylococcus aureus
subsp. aureus Mu50]
gi|21205428|dbj|BAB96121.1| MW2256 [Staphylococcus aureus subsp. aureus MW2]
gi|49245561|emb|CAG44039.1| putative ribose 5-phosphate isomerase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|87125864|gb|ABD20378.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203812|gb|ABD31622.1| ribose 5-phosphate isomerase, putative [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|147741843|gb|ABQ50141.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
JH9]
gi|149947293|gb|ABR53229.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
JH1]
gi|150375249|dbj|BAF68509.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722786|dbj|BAF79203.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160369337|gb|ABX30308.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253726217|gb|EES94946.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257788651|gb|EEV26991.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9781]
gi|257840400|gb|EEV64860.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A9763]
gi|257841746|gb|EEV66183.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9719]
gi|257847481|gb|EEV71483.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A9299]
gi|257851859|gb|EEV75793.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A8115]
gi|257854630|gb|EEV77578.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A6300]
gi|257856412|gb|EEV79321.1| ribose-5-phosphate isomerase [Staphylococcus aureus A6224]
gi|257859539|gb|EEV82391.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A5948]
gi|257862518|gb|EEV85286.1| ribose-5-phosphate isomerase A [Staphylococcus aureus A5937]
gi|259160009|gb|EEW45044.1| hypothetical protein SA930_1575 [Staphylococcus aureus 930918-3]
gi|259162107|gb|EEW46685.1| hypothetical protein SAD30_0146 [Staphylococcus aureus D30]
gi|262076257|gb|ACY12230.1| ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
ED98]
gi|269941922|emb|CBI50333.1| putative ribose 5-phosphate isomerase [Staphylococcus aureus subsp.
aureus TW20]
gi|282591336|gb|EFB96409.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A10102]
gi|282592621|gb|EFB97630.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9765]
gi|282763835|gb|EFC03963.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A8117]
gi|285817999|gb|ADC38486.1| Ribose 5-phosphate isomerase A [Staphylococcus aureus 04-02981]
gi|294824253|gb|EFG40677.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A9754]
gi|294969963|gb|EFG45981.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A8819]
gi|296885522|gb|EFH24459.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178853|gb|EFH38098.1| ribose 5-phosphate isomerase A [Staphylococcus aureus A8796]
gi|300887840|gb|EFK83035.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302752208|gb|ADL66385.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341870|gb|EFM07775.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312830683|emb|CBX35525.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128747|gb|EFT84748.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198126|gb|EFU28457.1| ribose-5-phosphate isomerase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140123|gb|EFW31982.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143393|gb|EFW35174.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329315024|gb|AEB89437.1| Ribose-5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
T0131]
gi|329723533|gb|EGG60062.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
21172]
gi|329726063|gb|EGG62536.1| ribose 5-phosphate isomerase A [Staphylococcus aureus subsp. aureus
21189]
Length = 228
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
D +K + + MTLG+GTGST + + +A I G+ + + +S
Sbjct: 3 DVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +DL+IDG DE+D L +IKG GGAL REK+I ASRF+V+ D
Sbjct: 63 LAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K V LP+E+D+F L ++ A ++ R N F++D GNY
Sbjct: 123 ETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADI-----KVERRVNEDVAFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP L ++ GV E G F++M D I+GT +G +L+K
Sbjct: 178 ILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEG-VKILEK 228
>gi|327311332|ref|YP_004338229.1| ribose-5-phosphate isomerase [Thermoproteus uzoniensis 768-20]
gi|326947811|gb|AEA12917.1| ribose-5-phosphate isomerase [Thermoproteus uzoniensis 768-20]
Length = 226
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
MK AR+A+++V DG +G+G+GSTAK F+ L+ +A G RV ++ +S ++E
Sbjct: 1 MKELLARKAVEFVRDGSVVGLGSGSTAKAFIEELSRAVAEKGIRVTLVATSIDSELKALE 60
Query: 65 HHIPLH--SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ + P V S+DL++DG DEI IKG GGA++REK++ + AS ++I +
Sbjct: 61 VGLGPYLVPPWAVDSIDLAVDGADEISRDRMFIKGGGGAMVREKVVDYRASTLVIIAEAH 120
Query: 123 KRVDFLGRG-MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS--GLFVSDGGNY 179
K VD L +PIE+ ++ +G ELR + G G +SD GN+
Sbjct: 121 KLVDRLPSNRPIPIEVLPAAWRLVARDVERR---WGGKTELRACKCGGKLGPLISDNGNF 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAII 219
I+D P + EL IPGV++ GLF D I+
Sbjct: 178 ILDWVPPGPAYP-ELEDELKAIPGVVDTGLFAKRRDAVIL 216
>gi|238685518|sp|A3M5Z8|RPIA_ACIBT RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|193077515|gb|ABO12342.2| ribose 5-phosphate isomerase [Acinetobacter baumannii ATCC 17978]
Length = 223
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
S+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 SLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNIILDVFNLNILNAIDLE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T+DG
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNDGIEE 219
>gi|293607898|ref|ZP_06690201.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828471|gb|EFF86833.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 223
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
S+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 SLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVFNLNILNAIELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNNGIEE 219
>gi|169795749|ref|YP_001713542.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii AYE]
gi|184158346|ref|YP_001846685.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii ACICU]
gi|213157559|ref|YP_002319604.1| ribose 5-phosphate isomerase [Acinetobacter baumannii AB0057]
gi|215483233|ref|YP_002325440.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii AB307-0294]
gi|239503969|ref|ZP_04663279.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii AB900]
gi|301344678|ref|ZP_07225419.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii AB056]
gi|301511225|ref|ZP_07236462.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii AB058]
gi|301595563|ref|ZP_07240571.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii AB059]
gi|332853304|ref|ZP_08434683.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii 6013150]
gi|332871199|ref|ZP_08439776.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii 6013113]
gi|332873462|ref|ZP_08441414.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii 6014059]
gi|226694488|sp|B7I936|RPIA_ACIB5 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|226734905|sp|B7H207|RPIA_ACIB3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238688037|sp|B0V681|RPIA_ACIBY RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238691025|sp|B2I2V7|RPIA_ACIBC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|169148676|emb|CAM86542.1| ribose 5-phosphate isomerase [Acinetobacter baumannii AYE]
gi|183209940|gb|ACC57338.1| Ribose 5-phosphate isomerase [Acinetobacter baumannii ACICU]
gi|213056719|gb|ACJ41621.1| ribose 5-phosphate isomerase [Acinetobacter baumannii AB0057]
gi|213987082|gb|ACJ57381.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii AB307-0294]
gi|322508673|gb|ADX04127.1| rpiA [Acinetobacter baumannii 1656-2]
gi|323518281|gb|ADX92662.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii
TCDC-AB0715]
gi|332728703|gb|EGJ60066.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii 6013150]
gi|332731684|gb|EGJ62967.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii 6013113]
gi|332738350|gb|EGJ69225.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii 6014059]
Length = 223
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
S+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 SLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVFNLNILNAIDLE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T+DG
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNDGIEE 219
>gi|57650878|ref|YP_187136.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
COL]
gi|67461250|sp|Q5HDM1|RPIA_STAAC RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|57285064|gb|AAW37158.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
COL]
Length = 228
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
D +K + + MTLG+GTGST + + +A I G+ + + +S
Sbjct: 3 DVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +DL+IDG DE+D L +IKG GGAL REK+I ASRF+V+ D
Sbjct: 63 LAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K V LP+E+D+F + L ++ A ++ R N F++D GNY
Sbjct: 123 ETKIVQYLGETFKLPVEVDKFNWYQILRKIESYADI-----KVERRVNEDVAFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP L ++ GV E G F++M D I+GT +G +L+K
Sbjct: 178 ILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEG-VKILEK 228
>gi|302333969|gb|ADL24162.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 228
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 118/232 (50%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
D +K + + MTLG+GTGST + + +A I G+ + + +S
Sbjct: 3 DVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNIIGVCTSNKIAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV +DL+IDG DE+D L +IKG GGAL REK+I ASRF+V+ D
Sbjct: 63 LAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K V LP+E+D+F L ++ A ++ R N F++D GNY
Sbjct: 123 ETKMVQYLGETFKLPVEVDKFNWYHILRKIESYADI-----KVERRVNEDVAFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP L ++ GV E G F++M D I+GT +G +L+K
Sbjct: 178 ILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEG-VKILEK 228
>gi|15639604|ref|NP_219054.1| ribose-5-phosphate isomerase A [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025842|ref|YP_001933614.1| ribose-5-phosphate isomerase A [Treponema pallidum subsp. pallidum
SS14]
gi|6226035|sp|O83625|RPIA_TREPA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238689333|sp|B2S3K6|RPIA_TREPS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|3322914|gb|AAC65592.1| ribose 5-phosphate isomerase (rpiA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018417|gb|ACD71035.1| ribose 5-phosphate isomerase [Treponema pallidum subsp. pallidum
SS14]
Length = 254
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 18/243 (7%)
Query: 2 DALQMKRNAARRAIQ-YVVDG-----MTLGMGTGSTAKEFMILLADKIANG--FRVQVIP 53
D K A+R++ V +G M++G+GTGSTA + +AD +A G + +P
Sbjct: 13 DVTAQKLLVAQRSVDTLVQEGVLHAHMSIGLGTGSTAMPAVKRIADHLARGTLSDIAAVP 72
Query: 54 SSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+S T C+ ++IPL S +D++IDG DEID++ +IKG G ALL+EKI A+
Sbjct: 73 TSFQTALICERYNIPLFSLSSKRIGGKLDVTIDGADEIDTQNFVIKGGGAALLQEKIAAY 132
Query: 111 AASRFIVIGDESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS 169
++ F++I DE+K V+ R LPIE+ + +GL+ +R
Sbjct: 133 NSAHFVIIVDETKVVETLGTRAALPIEVVPEARMSVMR----TLQDWGLSVHIREAVRKK 188
Query: 170 GLFVSDGGNYIVDAFFGFIPD--PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
G V+D GN+I+DA + +P PQ + L +PGVIE+GLF + +DG
Sbjct: 189 GPVVTDHGNFILDARWQSLPTRTPQDMERALNALPGVIENGLFTERTVRVFVAHADGSVE 248
Query: 228 VLQ 230
Sbjct: 249 ERS 251
>gi|50546122|ref|XP_500588.1| YALI0B06941p [Yarrowia lipolytica]
gi|74635642|sp|Q6CFH4|RPIA_YARLI RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|49646454|emb|CAG82819.1| YALI0B06941p [Yarrowia lipolytica]
Length = 243
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 15/239 (6%)
Query: 4 LQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
Q KR AA +A++ Y D +G+G+GST +A I + ++
Sbjct: 9 EQAKRIAAHQAVEQHYPKDAKVVGIGSGSTVVYVAEKIASLPKELTKDTVFISTGFQSKQ 68
Query: 61 FCKIHHIPLHSPEDV--SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + L + +D++ DG DE D +L IKG G L +EKI+A A +F+V+
Sbjct: 69 LIQNAGLRLGCIDQYSNGDLDVAFDGADETDPQLNCIKGGGACLFQEKIVAECARKFVVV 128
Query: 119 GDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVA-SCFGLNEELRLRRNGSGLFVS 174
D K+ + +PIE+ NK ++ LK++ L +G ++
Sbjct: 129 ADYRKQSKALGTVWIQGIPIEVVPDAYNKVIADLKKMGAQSAVLRPGSP---GKAGPIIT 185
Query: 175 DGGNYIVDAFFGFI-PDP-QIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+IVDA+FG I PD + + ++ + GV+E GLF N D A G +DG + K
Sbjct: 186 DNGNFIVDAYFGEIQPDAVKDLHIKIKLLLGVVETGLFTN-ADVAYFGNADGTISTITK 243
>gi|260554811|ref|ZP_05827032.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii ATCC 19606]
gi|260411353|gb|EEX04650.1| ribose 5-phosphate isomerase A [Acinetobacter baumannii ATCC 19606]
Length = 223
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
++D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 NLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVFNLNILNAIDLE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T+DG
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNDGIEE 219
>gi|260550327|ref|ZP_05824539.1| ribose 5-phosphate isomerase A [Acinetobacter sp. RUH2624]
gi|260406639|gb|EEX00120.1| ribose 5-phosphate isomerase A [Acinetobacter sp. RUH2624]
Length = 223
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
S+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 SLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVFNLNILNAIDLE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNNGIEE 219
>gi|253734252|ref|ZP_04868417.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253727947|gb|EES96676.1| ribose 5-phosphate isomerase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 228
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 8/232 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
D +K + + MTLG+GTGST + + +A I G+ + + +S
Sbjct: 3 DVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAF 62
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
K I + DV+ +DL+IDG DE+D L +IKG GGAL REK+I ASRF+V+ D
Sbjct: 63 LAKELGIKICEINDVAHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVD 122
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
E+K V LP+E+D+F L ++ A ++ R N F++D GNY
Sbjct: 123 ETKMVQYLGETFKLPVEVDKFNWYHILRKIESYADI-----KVERRVNEDVAFITDNGNY 177
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D DP L ++ GV E G F++M D I+GT +G +L+K
Sbjct: 178 ILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEG-VKILEK 228
>gi|254468389|ref|ZP_05081795.1| ribose 5-phosphate isomerase A [beta proteobacterium KB13]
gi|207087199|gb|EDZ64482.1| ribose 5-phosphate isomerase A [beta proteobacterium KB13]
Length = 223
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 81/230 (35%), Positives = 126/230 (54%), Gaps = 9/230 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFC 62
++ K A +A+ YV D +G+GTGSTA F+ LA+KI +QV+ SS +E
Sbjct: 1 MEDKEIIAIKALDYVTDNSMIGLGTGSTANFFIKHLANKIKNERLNIQVVASSTVSEIEA 60
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ + + L + + ++DL +DG DEI + L ++KG G L++EKI+A +A +FI+I D S
Sbjct: 61 QRNKLNLIGIDTLETLDLYVDGADEITNDLNVLKGRGYDLVKEKILAQSAKKFIIIADHS 120
Query: 123 KRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
KRV+ +PIE+ T K++ FG LR G +S GNYI
Sbjct: 121 KRVNRIGENYPIPIEVL----KSTWRLSKKILDKFG-QGSLRKNAAGDAYAISSAGNYIF 175
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D F +P + + ++ + PGVIE G+F + DCA+I +G +L K
Sbjct: 176 DYSFDEMP-LRDLHEKILSSPGVIETGIFYAITDCALI-VDNGHIEILSK 223
>gi|325122459|gb|ADY81982.1| ribose 5-phosphate isomerase [Acinetobacter calcoaceticus PHEA-2]
Length = 223
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSKATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
S+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 SLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVFNFNILNAIELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNNGIEE 219
>gi|255348571|ref|ZP_05380578.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis 70]
gi|255503111|ref|ZP_05381501.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis 70s]
Length = 242
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 9/227 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ A A+ V GM +G+G+GSTA+EF++ L D++ + + SSR ++ +
Sbjct: 18 KQKLALEAVALVEPGMCVGLGSGSTAREFILALGDRVRTERLVITAVASSRISQLLAEAV 77
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + VDL +DG DE+D LR+IKG GGAL REKI+ + R +++ DE K V
Sbjct: 78 GIPLLDHSLLQDVDLVVDGADEVDPCLRMIKGGGGALFREKILLQSGKRNVILVDERKLV 137
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG+ LPIEI FG + + + G E R G F++D GNYI D
Sbjct: 138 PTLGKFSLPIEIVPFGCSSVQR----ILNKQGYFGEWRETSAGE-RFITDNGNYIYDVRT 192
Query: 186 GF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P+ L I G+I+ G I +G +DG V +K
Sbjct: 193 PDSYANPEEDMIRLLQIRGIIDVGFVIAKA-EVWVGYADGSI-VRKK 237
>gi|289806048|ref|ZP_06536677.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 187
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 67/199 (33%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 33 KEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRL 92
F+ L G + SS + K I + +V S+ + +DG DEI+ +
Sbjct: 1 AHFIDALGTM--KGQIEGAVSSSDASTEKLKGLGIHVFDLNEVDSLGIYVDGADEINGHM 58
Query: 93 RLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEV 152
++IKG G AL REKIIA A +FI I D SK+VD LG+ LP+E+ +
Sbjct: 59 QMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQ---- 114
Query: 153 ASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
G E R V+D GN I+D + I DP + + IPGV+ GLF N
Sbjct: 115 LVKLGGRPEYRQN------VVTDNGNVILDVYGMEILDPIALENAINAIPGVVTVGLFAN 168
Query: 213 M-VDCAIIGTSDGECLVLQ 230
D A+IGT DG +++
Sbjct: 169 RGADVALIGTPDGVKTIVK 187
>gi|239909134|ref|YP_002955876.1| ribose-5-phosphate isomerase A [Desulfovibrio magneticus RS-1]
gi|239799001|dbj|BAH77990.1| ribose-5-phosphate isomerase A [Desulfovibrio magneticus RS-1]
Length = 235
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 72/216 (33%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHHIPLHSPE 73
V GM +G+G GSTA + LA + G +P++R + +P+ +
Sbjct: 20 HLVGPGMAVGLGHGSTAVAVVPFLAARAGRGELAGTAFVPAARYMAQALRAAGLPVACLD 79
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGM 132
D + L+IDG DEI L IKG GGALL EKI+A AA RF+++ D+ K R
Sbjct: 80 DFPRLALAIDGADEIAPNLDCIKGGGGALLYEKIVAQAAERFVLVADDGKCSPALGTRHA 139
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
LP+E+ F + T + + G LR R +G + GN I D FG + DP
Sbjct: 140 LPVEVTPFALAPT----VDFLAAIGGAPTLRRRPDGD-PMRTQRGNCICDCAFGPLADPA 194
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++ L GV HGLF+ + A I DG +
Sbjct: 195 GLAALLDARAGVAGHGLFVGLAQAAFIAGPDGVQEL 230
>gi|126465887|ref|YP_001040996.1| ribose-5-phosphate isomerase [Staphylothermus marinus F1]
gi|126014710|gb|ABN70088.1| ribose-5-phosphate isomerase [Staphylothermus marinus F1]
Length = 233
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 6 MKRNAARRAI----QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+K+ ++ A+ + D LG+GTGST K F+ L ++ +V+ SS T N+
Sbjct: 5 LKKLSSIYALRMFIDKIRDSKVLGIGTGSTVKYFIDELI-RLGMLKDKKVVVSSYATHNY 63
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
H I ++P + + D+ +DG DEI++ L +IKG G ALL EK +A + I I D
Sbjct: 64 LYKHGIDAYTPINCNYADIYVDGLDEINANLDIIKGRGAALLWEKQLAIRSKLRIYIADY 123
Query: 122 SKRVDFLG--RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K +PIE+ V + E + G LR+ + G ++D GN+
Sbjct: 124 TKVNPEQYLYMKPVPIEVVPNAVYYVI----EKLTILGYKPVLRIGKMKDGPIITDNGNF 179
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQK 231
I+D + I + + + E+ I GV+E GLF N+VD I+ V +
Sbjct: 180 IIDLVYEKIQNAKQVDEEIKKINGVVETGLFPNNLVDYVIVSYPGNIVKVYSR 232
>gi|291059988|gb|ADD72723.1| ribose 5-phosphate isomerase A [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 262
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 18/243 (7%)
Query: 2 DALQMKRNAARRAIQ-YVVDG-----MTLGMGTGSTAKEFMILLADKIANG--FRVQVIP 53
D K A+R++ V +G M++G+GTGSTA + +AD +A G + +P
Sbjct: 21 DVTAQKLLVAQRSVDTLVQEGVLHAHMSIGLGTGSTAMPAVKRIADHLARGTLSDIAAVP 80
Query: 54 SSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+S T C+ ++IPL S +D++IDG DEID++ +IKG G ALL+EKI A+
Sbjct: 81 TSFQTALICERYNIPLFSLSSKRIGGKLDVTIDGADEIDTQNFVIKGGGAALLQEKIAAY 140
Query: 111 AASRFIVIGDESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS 169
++ F++I DE+K V+ R LPIE+ + +GL+ +R
Sbjct: 141 NSAHFVIIVDETKVVETLGTRAALPIEVVPEARMSVMR----TLQDWGLSVHIREAVRKK 196
Query: 170 GLFVSDGGNYIVDAFFGFIPD--PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
G V+D GN+I+DA + +P PQ + L +PGVIE+GLF + +DG
Sbjct: 197 GPVVTDHGNFILDARWQSLPTRTPQDMERALNALPGVIENGLFTERTVRVFVAHADGSVE 256
Query: 228 VLQ 230
Sbjct: 257 ERS 259
>gi|262376120|ref|ZP_06069350.1| ribose 5-phosphate isomerase A [Acinetobacter lwoffii SH145]
gi|262308721|gb|EEY89854.1| ribose 5-phosphate isomerase A [Acinetobacter lwoffii SH145]
Length = 223
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS T K I + VS
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSEATAQRLKKLGIEVVDMNSVS 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRGMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK V LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVGQLGREFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D + I + +
Sbjct: 137 EVIPMARSAVARK----IVSLGGDPAYREG------VVTDNGNVILDVYNLNILNALELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
L +IPGV+ +G+F IN D AI+ T +G
Sbjct: 187 KTLNDIPGVVCNGIFAINKADIAIVATDNGIEE 219
>gi|70953348|ref|XP_745781.1| ribose 5-phosphate epimerase [Plasmodium chabaudi chabaudi]
gi|56526210|emb|CAH77792.1| ribose 5-phosphate epimerase, putative [Plasmodium chabaudi
chabaudi]
Length = 227
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 8/227 (3%)
Query: 11 ARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHI 67
A +A+ YV T+G+GTGST + + + +G + +P+S +TE K I
Sbjct: 1 AYKAVDEYVQSNTTIGLGTGSTVFYVLERIETLMKSGKIKNLVCVPTSIDTEMKAKSLGI 60
Query: 68 PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD- 126
PL +D++IDG DE+DS L LIKG GGAL+REK++A + FIVI DESK +
Sbjct: 61 PLTGLTKNLKIDIAIDGADEVDSDLNLIKGRGGALVREKLVAANTACFIVIVDESKMCED 120
Query: 127 -FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
G +PIEI FG + +L ++++ N +LR +F++D NYIVD FF
Sbjct: 121 GLGTTGAVPIEILSFGYEMIIESLLKISALK--NCTYKLREKDGEIFITDNHNYIVDFFF 178
Query: 186 G-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I + ++ GV++HG+F NM A+I S+G L L K
Sbjct: 179 ETPIENLVKTCEQIKMTTGVVDHGIFANMASIALISKSNGTILTLNK 225
>gi|262372525|ref|ZP_06065804.1| ribose 5-phosphate isomerase A [Acinetobacter junii SH205]
gi|262312550|gb|EEY93635.1| ribose 5-phosphate isomerase A [Acinetobacter junii SH205]
Length = 223
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS T K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSNATAERLKKLGIEVVDMNSVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK V+ LGR LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVEQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D + I + +
Sbjct: 137 EVIPMARSAVARK----IVALGGDPVYREG------VVTDNGNVILDVYNLNILNAIELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
L NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KALNNIPGVVTNGIFALNAASIAIVATNNGIEE 219
>gi|76788935|ref|YP_328021.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis A/HAR-13]
gi|237802636|ref|YP_002887830.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis B/Jali20/OT]
gi|237804558|ref|YP_002888712.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis B/TZ1A828/OT]
gi|123607063|sp|Q3KME9|RPIA_CHLTA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|76167465|gb|AAX50473.1| ribose 5-phosphate isomerase [Chlamydia trachomatis A/HAR-13]
gi|231272858|emb|CAX09768.1| ribose 5-phosphate isomerase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273870|emb|CAX10661.1| ribose 5-phosphate isomerase [Chlamydia trachomatis B/Jali20/OT]
Length = 242
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 117/227 (51%), Gaps = 8/227 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ A A+ V GM +G+G+GSTA+EF++ L D++ + + SSR ++ +
Sbjct: 18 KQKLALEAVALVEPGMCVGLGSGSTAREFILALGDRVRTERLVITAVASSRISQLLAEAV 77
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + VDL +DG DE+D LR+IKG GGAL REKI+ + R +++ DE K V
Sbjct: 78 GIPLLDHSLLQDVDLVVDGADEVDPCLRMIKGGGGALFREKILLQSGKRNVILVDERKLV 137
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG+ LPIEI FG + + + G E R G F++D GNYI D
Sbjct: 138 PTLGKFSLPIEIAPFGCSSVQR----ILNKQGYFGEWRETSAGE-RFITDNGNYIYDVRT 192
Query: 186 GF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P+ L I G+I+ G I +G +DG + +K
Sbjct: 193 PDSYANPEEDMIRLLQIRGIIDVGFVIAKA-EVWVGYADGSIVRKKK 238
>gi|15604933|ref|NP_219717.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis D/UW-3/CX]
gi|255506788|ref|ZP_05382427.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis D(s)2923]
gi|6831639|sp|O84215|RPIA_CHLTR RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|3328621|gb|AAC67805.1| Ribose-5-P Isomerase A [Chlamydia trachomatis D/UW-3/CX]
gi|289525251|emb|CBJ14727.1| ribose 5-phosphate isomerase [Chlamydia trachomatis Sweden2]
gi|296434799|gb|ADH16977.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis E/150]
gi|296435728|gb|ADH17902.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis G/9768]
gi|296437588|gb|ADH19749.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis G/11074]
gi|296438519|gb|ADH20672.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis E/11023]
gi|297140087|gb|ADH96845.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis G/9301]
gi|297748343|gb|ADI50889.1| Ribose 5-phosphate isomerase [Chlamydia trachomatis D-EC]
gi|297749223|gb|ADI51901.1| Ribose 5-phosphate isomerase [Chlamydia trachomatis D-LC]
Length = 242
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 9/227 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ A A+ V GM +G+G+GSTA+EF++ L D++ + + SSR ++ +
Sbjct: 18 KQKLALEAVALVEPGMCVGLGSGSTAREFILALGDRVRTERLVITAVASSRISQLLAEAV 77
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + VDL +DG DE+D LR+IKG GGAL REKI+ + R +++ DE K V
Sbjct: 78 GIPLSDHSLLQDVDLVVDGADEVDPCLRMIKGGGGALFREKILLQSGKRNVILVDERKLV 137
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG+ LPIEI FG + + + G E R G F++D GNYI D
Sbjct: 138 PTLGKFSLPIEIAPFGCSSVQR----ILNKQGYFGEWRETSAGE-RFITDNGNYIYDVRT 192
Query: 186 GF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P+ L I G+I+ G I +G +DG V +K
Sbjct: 193 PDSYANPEEDMIRLLQIRGIIDVGFVIAKA-EVWVGYADGSI-VRKK 237
>gi|299769886|ref|YP_003731912.1| ribose-5-phosphate isomerase A [Acinetobacter sp. DR1]
gi|298699974|gb|ADI90539.1| ribose-5-phosphate isomerase A [Acinetobacter sp. DR1]
Length = 223
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVFNLNILNAIDLE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNNGIEE 219
>gi|166154423|ref|YP_001654541.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis 434/Bu]
gi|166155298|ref|YP_001653553.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|255311013|ref|ZP_05353583.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis 6276]
gi|255317314|ref|ZP_05358560.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis 6276s]
gi|301335682|ref|ZP_07223926.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis L2tet1]
gi|238687440|sp|B0B9W3|RPIA_CHLT2 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|238687464|sp|B0BBJ3|RPIA_CHLTB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|165930411|emb|CAP03904.1| ribose 5-phosphate isomerase [Chlamydia trachomatis 434/Bu]
gi|165931286|emb|CAP06858.1| ribose 5-phosphate isomerase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|296436652|gb|ADH18822.1| ribose-5-phosphate isomerase A [Chlamydia trachomatis G/11222]
Length = 242
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 9/227 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ A A+ V GM +G+G+GSTA+EF++ L D++ + + SSR ++ +
Sbjct: 18 KQKLALEAVALVEPGMCVGLGSGSTAREFILALGDRVRTERLVITAVASSRISQLLAEAV 77
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + VDL +DG DE+D LR+IKG GGAL REKI+ + R +++ DE K V
Sbjct: 78 GIPLLDHSLLQDVDLVVDGADEVDPCLRMIKGGGGALFREKILLQSGKRNVILVDERKLV 137
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG+ LPIEI FG + + + G E R G F++D GNYI D
Sbjct: 138 PTLGKFSLPIEIAPFGCSSVQR----ILNKQGYFGEWRETSAGE-RFITDNGNYIYDVRT 192
Query: 186 GF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+P+ L I G+I+ G I +G +DG V +K
Sbjct: 193 PDSYANPEEDMIRLLQIRGIIDVGFVIAKA-EVWVGYADGSI-VRKK 237
>gi|15835103|ref|NP_296862.1| ribose-5-phosphate isomerase A [Chlamydia muridarum Nigg]
gi|270285273|ref|ZP_06194667.1| ribose-5-phosphate isomerase A [Chlamydia muridarum Nigg]
gi|270289289|ref|ZP_06195591.1| ribose-5-phosphate isomerase A [Chlamydia muridarum Weiss]
gi|301336669|ref|ZP_07224871.1| ribose-5-phosphate isomerase A [Chlamydia muridarum MopnTet14]
gi|13878756|sp|Q9PKI0|RPIA_CHLMU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|7190526|gb|AAF39331.1| ribose 5-phosphate isomerase [Chlamydia muridarum Nigg]
Length = 239
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 8/223 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ AR A+ V GM +G+G+GSTA+EF++ L +++ + + SSR + +
Sbjct: 18 KQKLAREAVALVEPGMRVGLGSGSTAREFILALGERVRNERLAITAVASSRISHLLAQAL 77
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IP P +DL +DG DE+D+ LR+IKG GGAL REKI+ + R I++ DE K V
Sbjct: 78 GIPFLDPALSQELDLVVDGADEVDANLRMIKGGGGALFREKILLQSGKRNIILVDERKLV 137
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG LPIEI FG + ++V + G + R + + F++D GNYI D
Sbjct: 138 SVLGTFPLPIEISPFGCSSV----EKVLNQQGYIGDWR-KTSHGERFITDNGNYIYDVSS 192
Query: 186 GF-IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
P P+ L I G+I+ G I +G +DG +
Sbjct: 193 PDSYPHPEEDLIRLLQIRGIIDVGFVIAKA-EVWVGYADGTVV 234
>gi|159041316|ref|YP_001540568.1| ribose 5-phosphate isomerase [Caldivirga maquilingensis IC-167]
gi|157920151|gb|ABW01578.1| ribose 5-phosphate isomerase [Caldivirga maquilingensis IC-167]
Length = 229
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 114/216 (52%), Gaps = 9/216 (4%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHH--IPLHSP 72
YV G +G+G+GSTA F+ LA+ I G V++I +S TE L P
Sbjct: 14 YVRSGYVIGVGSGSTALMFLSELAENIEGGGLTDVKLIATSTETEYEIVKLGLGELLRYP 73
Query: 73 EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRG 131
V VD++IDG DE+D L+KG GGAL REKII + AS FIVI DESK VD +
Sbjct: 74 WQVDHVDVAIDGADEVDKDKNLVKGGGGALTREKIIDYWASEFIVIVDESKLVDKIPSKH 133
Query: 132 MLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDP 191
+P+E+ + + L+ +G + ELR G ++D GNYI+D G +P
Sbjct: 134 PIPVEVVPYAWPLVKARLER---DYGGSAELRYSSGKRGPVITDNGNYIIDYRPGSGIEP 190
Query: 192 QIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
+ + IPGV+E GLF + V I+G DG
Sbjct: 191 REGERVIKCIPGVVEVGLFNGLKVSRVIVGKQDGSV 226
>gi|169633638|ref|YP_001707374.1| ribose-5-phosphate isomerase A [Acinetobacter baumannii SDF]
gi|238688228|sp|B0VQK6|RPIA_ACIBS RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|169152430|emb|CAP01385.1| ribose 5-phosphate isomerase [Acinetobacter baumannii]
Length = 223
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVV 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
S+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 SLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVFNLNILNAIDLE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T+DG
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNDGIEE 219
>gi|328949354|ref|YP_004366691.1| ribose-5-phosphate isomerase A [Treponema succinifaciens DSM 2489]
gi|328449678|gb|AEB15394.1| Ribose-5-phosphate isomerase A [Treponema succinifaciens DSM 2489]
Length = 239
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 16/238 (6%)
Query: 2 DALQMKRNAARRAIQ-YVV-----DGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIP 53
K AA AI + GM +G+GTGSTA + LA +I +G ++ +
Sbjct: 4 SKDGQKILAATTAIDSLIKEGKIFSGMKIGLGTGSTAMPAVKRLAQRIEDGTLKDIKAVA 63
Query: 54 SSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+S T C+ IP+++ D ++DL+IDG DEID LIKG G ALLREKIIA+
Sbjct: 64 TSFQTTLACEELGIPVYTLNDRAINGTLDLAIDGADEIDPDNNLIKGGGAALLREKIIAY 123
Query: 111 AASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS 169
+S F ++ D SK V LP+EI + AL++ G LR +
Sbjct: 124 NSSNFAIVADSSKDVKSLGTGFALPVEIIAEARVPVIKALEK----LGAECVLREGVKKA 179
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
G ++D GN I+D + +P + ++ I GV+E G F + I SDG
Sbjct: 180 GPVITDNGNLILDCKWKSPVNPHEMEEKIDGIIGVVECGFFTKIKPEVFIAKSDGTVE 237
>gi|257076267|ref|ZP_05570628.1| ribose-5-phosphate isomerase A [Ferroplasma acidarmanus fer1]
Length = 222
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENF 61
KR +A A+++V M LG+GTGST K F+ L + + +G + +P+S T +
Sbjct: 3 ENEKRISAMEALKHVHSNMKLGLGTGSTTKYFLDGLGELVKSGKITDITGVPTSLRTADL 62
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K + I + + + +++ DG DE D LIKG GGAL+REKI+A+ + ++ D
Sbjct: 63 AKSYGIKIENNLE--GIEIDFDGADEFDGSGNLIKGGGGALVREKIVAYNSKEVYIMADH 120
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK + L LP+E+ F + T K+ G R + F SD GNYI+
Sbjct: 121 SKFSEKLHSFPLPVEVLPFMEDVT----KKNIEKTGCKATFRDGKK----FKSDNGNYIL 172
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
D F F ++ E+ IPGV+E G+F + IG ++
Sbjct: 173 DCRFDFTD--VVLETEIKMIPGVVEVGIFSGITTKVFIGENE 212
>gi|195347042|ref|XP_002040063.1| GM16000 [Drosophila sechellia]
gi|194135412|gb|EDW56928.1| GM16000 [Drosophila sechellia]
Length = 280
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDV 75
D LG+G+GST + +A+++ G + +PSS + +++ L +
Sbjct: 63 EDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRN 122
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML-- 133
++D++IDG DE+D + LIKG GG LL+EK++A A FIV+ D +K LG
Sbjct: 123 PNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRLGEQWCRG 182
Query: 134 -PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
PIE+ + + FG LR+ + +G V+D GN+++D F D
Sbjct: 183 VPIEVAPMAYVPI---KLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYD 239
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF+NM G ++G V K
Sbjct: 240 WDEVNRAITLIPGVLETGLFVNMAHKCYYGMANGTVKVQNK 280
>gi|195585998|ref|XP_002082765.1| GD11753 [Drosophila simulans]
gi|194194774|gb|EDX08350.1| GD11753 [Drosophila simulans]
Length = 280
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDV 75
D LG+G+GST + +A+++ G + +PSS + +++ L +
Sbjct: 63 EDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRN 122
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML-- 133
++D++IDG DE+D + LIKG GG LL+EK++A A FIV+ D +K LG
Sbjct: 123 PNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRLGEQWCRG 182
Query: 134 -PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
PIE+ + + FG LR+ + +G V+D GN+++D F D
Sbjct: 183 VPIEVAPMAYVPI---KLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYD 239
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF+NM G ++G V K
Sbjct: 240 WDEVNRAITLIPGVLETGLFVNMAHKCYYGMANGTVKVQNK 280
>gi|162944906|gb|ABY20522.1| LP13860p [Drosophila melanogaster]
Length = 280
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDV 75
D LG+G+GST + +A+++ G + +PSS + +++ L +
Sbjct: 63 EDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRN 122
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML-- 133
++D++IDG DE+D + LIKG GG LL+EK++A A FIV+ D +K LG
Sbjct: 123 PNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRLGEQWCRG 182
Query: 134 -PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
PIE+ + + FG LR+ + +G V+D GN+++D F D
Sbjct: 183 VPIEVAPMAYVPI---KLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYD 239
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF+NM G ++G V K
Sbjct: 240 WDEVNRAITLIPGVLETGLFVNMAHKCYYGMANGSVKVQNK 280
>gi|307596586|ref|YP_003902903.1| ribose 5-phosphate isomerase [Vulcanisaeta distributa DSM 14429]
gi|307551787|gb|ADN51852.1| ribose 5-phosphate isomerase [Vulcanisaeta distributa DSM 14429]
Length = 233
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 114/222 (51%), Gaps = 10/222 (4%)
Query: 15 IQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHIP--LH 70
++Y G +G+GTGSTA F+ L I NG V ++P+S TE + L
Sbjct: 16 LKYARSGYVIGVGTGSTAMVFLRELHRLIINGVINNVLLVPTSTETEIEIVRLGLANLLR 75
Query: 71 SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLG 129
P V +D+++D DE+D R LIKG G AL REKII + A FIVI DESK D
Sbjct: 76 YPWQVDRIDVAVDSADEVDRRKNLIKGGGAALTREKIIDYWAREFIVIIDESKVFDSIPS 135
Query: 130 RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIP 189
+ +PIE+ F + + L+E G ELR G V+D GNYI+D +
Sbjct: 136 KHPIPIEVIPFAWSIVKARLEE----LGGTAELRFGSGKRGPVVTDNGNYIIDYMPRAVV 191
Query: 190 DPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVLQ 230
+ + + + +PGV+E G+F V IIG +DG + +
Sbjct: 192 NIEDLERTIKELPGVVEVGIFNGRRVSRVIIGKADGSVITMD 233
>gi|262370285|ref|ZP_06063611.1| ribose-5-phosphate isomerase A [Acinetobacter johnsonii SH046]
gi|262314627|gb|EEY95668.1| ribose-5-phosphate isomerase A [Acinetobacter johnsonii SH046]
Length = 223
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS T K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIELLPELQLE----AAVASSEATAERLKKLGIEVVDMNSVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LPI
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIARKFVCIVDDSKWVDQLGRDFPLPI 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D + I + +
Sbjct: 137 EVIPMARSAVARK----IVALGGDPAYREG------VVTDNGNVILDVYNLNILNALELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ +IPGV+ +G+F IN D A++ T G
Sbjct: 187 KTINDIPGVVCNGIFAINKADVAVVATDSGIEE 219
>gi|118482266|gb|ABK93060.1| unknown [Populus trichocarpa]
Length = 215
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 119/216 (55%), Gaps = 7/216 (3%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
M LG+GTGSTAK + +AD + G + IP+S+ T IPL + VD
Sbjct: 1 MVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQAVSLGIPLSDLDSHPIVD 60
Query: 80 LSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFL-GRGMLPIEID 138
L+IDG DE+DS L L+KG GG+LLREK+I A +FIVI DESK V + G +P+E+
Sbjct: 61 LAIDGADEVDSNLNLVKGRGGSLLREKMIESACKKFIVIVDESKLVPHVGASGAMPVEVV 120
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGS--GLFVSDGGNYIVDAFFGF-IPDPQIIS 195
F T L+ + G +LR G +FV+D GNYIVD FF + D +I S
Sbjct: 121 PFCWKFTQDKLQSLFDYAGCVAKLRSNNGGEDGEIFVTDNGNYIVDLFFKKDVGDLKIAS 180
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ + GV+EHG+F++M I+ G + K
Sbjct: 181 DAILRLAGVVEHGMFLDMATTVIVAGELG-ITIKNK 215
>gi|160939999|ref|ZP_02087344.1| hypothetical protein CLOBOL_04888 [Clostridium bolteae ATCC
BAA-613]
gi|158436579|gb|EDP14346.1| hypothetical protein CLOBOL_04888 [Clostridium bolteae ATCC
BAA-613]
Length = 226
Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 111/210 (52%), Gaps = 6/210 (2%)
Query: 18 VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
V D M LG+GTGST M L+++I G V +S TE + IPL S ED +
Sbjct: 19 VEDNMVLGLGTGSTVYYLMEKLSERIRGGLYVHGAATSLETEGLARRLGIPLISLEDART 78
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEI 137
+ L+IDG D ID IKG GGAL REKIIA A R + I D+SK V L +LP+E+
Sbjct: 79 IHLAIDGVDAIDPDFYSIKGGGGALFREKIIACKARRVLWIMDQSKLVHSLSGCVLPVEV 138
Query: 138 DQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGE 197
F V ++E +LR +FV+D G++I+D G D + +
Sbjct: 139 PAFAVPYVEEQVREAGFI------PKLRIKNGTVFVTDNGSHILDLTGGVEMDYPMAAVR 192
Query: 198 LCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
L ++ GV+E GLF ++ + I+GT +G
Sbjct: 193 LKSMTGVLETGLFGDICEKIIVGTENGTQE 222
>gi|324518114|gb|ADY47008.1| putative-ribose 5-phosphate isomerase [Ascaris suum]
Length = 299
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 12/224 (5%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHIPLHSPED 74
++ +G LG+G+GSTA+ + L D+I G + +P+S T + + + + E
Sbjct: 77 HIFNGCRLGVGSGSTARYLVEFLEDRIKAGKLRDIVCVPTSFLTRKWLLDAGLSVTNLEQ 136
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM-- 132
+D+ IDG DE+D+ L LIKG GG L +EKI+ +A F VI D SK+ LG
Sbjct: 137 QPELDVCIDGADEVDANLNLIKGGGGCLTQEKIVQTSAKHFFVIADSSKQSTVLGEKFLS 196
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF----- 187
+PIE+ + +K+ G LR+ + G ++D NY+VD F
Sbjct: 197 IPIEVVPSAYVPVMKWIKQQE---GGECVLRMAQRKCGPVITDNNNYLVDWNFPKGKFAN 253
Query: 188 IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L +PGV+E GLF+ + + T +G + K
Sbjct: 254 TNDLAALHQRLVKLPGVVETGLFVGVAEKVYFATPEGAVIEKAK 297
>gi|150015647|ref|YP_001307901.1| ribose 5-phosphate isomerase [Clostridium beijerinckii NCIMB 8052]
gi|149902112|gb|ABR32945.1| ribose 5-phosphate isomerase [Clostridium beijerinckii NCIMB 8052]
Length = 226
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 9/233 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K+N+A+ A++Y+ DGM +G+G G + + + V+++ S T+
Sbjct: 1 MSDNDLKKNSAKEAMKYIKDGMIVGLGGGRSIAYLIEFIKQ--DKNINVKIVTPSVKTKM 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
C + + V VD++ DG D++D +L +K GG +EK+IA A +I++ D
Sbjct: 59 LCIEKGLEVLYTSSVDKVDVAFDGCDQVDEKLNALKSGGGIHTKEKLIASMAEEYILLVD 118
Query: 121 ESKRVDFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
E+K V+ +P+ E+ + + + E +R G +SD GN
Sbjct: 119 EAK-VEKELTFNVPVVLEVLEDSLKYVEKKVLE----LNGKPVIRSSDIKDGFTISDNGN 173
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+VD FF + D ++ L I GVIE LF N++ II + +G + QK
Sbjct: 174 LLVDVFFNNVKDIHKLNDNLIRICGVIETSLFTNVITKVIIASKEGIREISQK 226
>gi|262279302|ref|ZP_06057087.1| ribose 5-phosphate isomerase [Acinetobacter calcoaceticus RUH2202]
gi|262259653|gb|EEY78386.1| ribose 5-phosphate isomerase [Acinetobacter calcoaceticus RUH2202]
Length = 223
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS+ T + K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIDLLPELQLE----AAVASSQATADRLKKLGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D F I + +
Sbjct: 137 EVIPMARSAVARK----LVALGGDPVYREG------VVTDNGNVILDVFNLNILNAIDVE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ NIPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTINNIPGVVTNGIFALNPATIAIVATNNGIEE 219
>gi|50084537|ref|YP_046047.1| ribose-5-phosphate isomerase A [Acinetobacter sp. ADP1]
gi|67461400|sp|Q6FCI6|RPIA_ACIAD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|49530513|emb|CAG68225.1| ribose 5-phosphate isomerase [Acinetobacter sp. ADP1]
Length = 223
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
++ G LG+GTGST + LL + + SS T K I + V
Sbjct: 21 HLPKGGILGVGTGSTVNFLIELLPELQLE----AAVASSEATAKRLKELGIEVVDMNHVG 76
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR-GMLPI 135
+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK V+ LGR LP+
Sbjct: 77 GLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVEQLGRDFPLPV 136
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + G + R V+D GN I+D + I + +
Sbjct: 137 EVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNVILDVYNLNILNALELE 186
Query: 196 GELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ +IPGV+ +G+F +N AI+ T++G
Sbjct: 187 KTINDIPGVVTNGIFALNAASIAIVATNNGIEE 219
>gi|195489102|ref|XP_002092595.1| GE14279 [Drosophila yakuba]
gi|194178696|gb|EDW92307.1| GE14279 [Drosophila yakuba]
Length = 241
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDV 75
D LG+G+GST + +A+++ G + +PSS + +++ L +
Sbjct: 24 EDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRN 83
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML-- 133
++D++IDG DE+D + LIKG GG LL+EK++A A FIV+ D +K LG
Sbjct: 84 PNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRLGEQWCRG 143
Query: 134 -PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
PIE+ + + FG LR+ + +G V+D GN+++D F D
Sbjct: 144 VPIEVAPMAYVPI---KLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYD 200
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF+NM G +DG+ V K
Sbjct: 201 WDEVNRAITLIPGVLETGLFVNMATKCYYGMADGKVKVQNK 241
>gi|71020151|ref|XP_760306.1| hypothetical protein UM04159.1 [Ustilago maydis 521]
gi|74700978|sp|Q4P6V4|RPIA_USTMA RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|46100015|gb|EAK85248.1| hypothetical protein UM04159.1 [Ustilago maydis 521]
Length = 286
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 10/220 (4%)
Query: 16 QYVVD-GMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
+V +G+G+GST + +A + A + +P+ + + L +
Sbjct: 48 NHVKPQHEIIGIGSGSTVPYVVERIAQQGPAVNAKRWFVPTGFQSRELIINAGLRLGDVD 107
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM- 132
S+D++IDG DE+D+ L IKG G LREK++A AA+ F+V+ D K LG
Sbjct: 108 SFPSIDVTIDGADEVDNALNCIKGGGACHLREKVLAEAANEFVVVADYRKNGSQLGTKWL 167
Query: 133 --LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF--I 188
+PIE+ F K L LK++ S LR+ + +G V+D GN+ +DA F +
Sbjct: 168 QGVPIEVAPFAYAKVLQNLKKMGSD---KAVLRMGKAKAGPVVTDNGNFCIDAPFPEAQM 224
Query: 189 PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
DP + + + GV+E GLF N+ A G DG +
Sbjct: 225 KDPSDLLKRIKLLTGVLEVGLFCNICKSAYFGNDDGTITI 264
>gi|194885094|ref|XP_001976384.1| GG22843 [Drosophila erecta]
gi|190659571|gb|EDV56784.1| GG22843 [Drosophila erecta]
Length = 241
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDV 75
D LG+G+GST + +A+++ G + +PSS + +++ L +
Sbjct: 24 EDTKILGIGSGSTVVFAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRN 83
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML-- 133
++D++IDG DE+D + LIKG GG LL+EK++A A FIV+ D +K LG
Sbjct: 84 PNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKNFIVVADYTKNSIRLGEQWCRG 143
Query: 134 -PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
PIE+ + + FG LR+ + +G V+D GN+++D F D
Sbjct: 144 VPIEVAPMAYVPI---KLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYD 200
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF+NM G +DG+ V K
Sbjct: 201 WDEVNRAITLIPGVLETGLFVNMATKCYYGMADGQVKVQNK 241
>gi|281364072|ref|NP_726309.3| CG30410 [Drosophila melanogaster]
gi|272432652|gb|AAM68242.3| CG30410 [Drosophila melanogaster]
Length = 241
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDV 75
D LG+G+GST + +A+++ G + +PSS + +++ L +
Sbjct: 24 EDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLILDYNLNLGDLDRN 83
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML-- 133
++D++IDG DE+D + LIKG GG LL+EK++A A FIV+ D +K LG
Sbjct: 84 PNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRLGEQWCRG 143
Query: 134 -PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
PIE+ + + FG LR+ + +G V+D GN+++D F D
Sbjct: 144 VPIEVAPMAYVPI---KLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANREYD 200
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF+NM G ++G V K
Sbjct: 201 WDEVNRAITLIPGVLETGLFVNMAHKCYYGMANGSVKVQNK 241
>gi|303249212|ref|ZP_07335449.1| ribose 5-phosphate isomerase [Desulfovibrio fructosovorans JJ]
gi|302489387|gb|EFL49338.1| ribose 5-phosphate isomerase [Desulfovibrio fructosovorans JJ]
Length = 239
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV--IPSSRNTENFCKIHHIPLHSPED 74
V GM +GMG GSTA + +LA++ A G +P++ + +P+ +D
Sbjct: 26 MVEPGMAVGMGHGSTAVAAVPVLAERAARGELPGTYFVPAAHFMAEALRRAGLPVAGLDD 85
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGML 133
+D++IDG DEID IKG GGALL EKI+ AA R +++ D K R L
Sbjct: 86 APVLDITIDGADEIDPAGNCIKGGGGALLYEKIVGQAAQRLVIVADAGKLSPRLCSRHAL 145
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQI 193
P+EI F + L L+ G N LR R +G ++ GN I D F +PDP
Sbjct: 146 PVEITPFALASELRFLRR----IGGNPSLRQRPDGD-PMRTERGNVIADCAFAPLPDPAA 200
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++ L GV HGLF+ + C ++ DG +
Sbjct: 201 LATSLDARAGVAGHGLFVGLASCIVVAGPDGVREL 235
>gi|225027187|ref|ZP_03716379.1| hypothetical protein EUBHAL_01443 [Eubacterium hallii DSM 3353]
gi|224955651|gb|EEG36860.1| hypothetical protein EUBHAL_01443 [Eubacterium hallii DSM 3353]
Length = 233
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 13/233 (5%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ MK+ A+ A++Y+ DGM +G+G GST LA ++ V+ S +T CK
Sbjct: 9 MNMKQLCAKEALKYIKDGMCIGLGGGSTIGYLAEYLA---KEERKITVVTPSDDTAELCK 65
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + S E + ++++ DG DE+D L +K G +EKIIA A +++++ DESK
Sbjct: 66 NLGLMVLSLEMTAHINIAFDGCDELDKELNALKANGAIHTKEKIIASMAEKYVLLIDESK 125
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
D L + + +E+ N + +++ G +R +G +SD GNYI+D
Sbjct: 126 FYDTLPLKDSVTLEVIPQSRNYVQAQIEK----LGGKAVMRKSGAKAGFVISDNGNYIMD 181
Query: 183 AFFGFIP----DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
F + P+ + +L + GV+E LFI++V A+ D E V++K
Sbjct: 182 TDFSNVAAFAGKPEELHQKLKQLTGVVETALFIDVVAFALCVCGD-EVKVIEK 233
>gi|283853039|ref|ZP_06370296.1| ribose 5-phosphate isomerase [Desulfovibrio sp. FW1012B]
gi|283571576|gb|EFC19579.1| ribose 5-phosphate isomerase [Desulfovibrio sp. FW1012B]
Length = 237
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 109/216 (50%), Gaps = 8/216 (3%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHHIPLHSPED 74
V GM +G+G GSTA E + +LAD+ G +P++R + H +P+ S +D
Sbjct: 26 LVEAGMAVGLGHGSTAVEAVPVLADRAGRGELAGTVFVPAARFMAEALRRHGLPVGSLDD 85
Query: 75 VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGML 133
+DL+IDG DEID L IKG GGALL EKI+ AA R +++ D K R L
Sbjct: 86 RPELDLAIDGADEIDPNLDCIKGGGGALLYEKIVGQAAKRLVIVADAGKLSPRLGTRHPL 145
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQI 193
P+EI F + L + G + LRLR +G ++ GN I D FG + DP
Sbjct: 146 PVEITPFALASELR----FLAGLGGHPALRLRPDGD-PMRTERGNVIADCPFGPMADPAG 200
Query: 194 ISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
++ L GV HGLFI + ++ DG +
Sbjct: 201 LAAALDARGGVAGHGLFIGLAALVVVAGEDGVRELR 236
>gi|195380617|ref|XP_002049067.1| GJ21382 [Drosophila virilis]
gi|194143864|gb|EDW60260.1| GJ21382 [Drosophila virilis]
Length = 242
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKI-ANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+ +G+G+GST + +A+++ G + +PSS H++ L +
Sbjct: 25 EETKVVGIGSGSTIVFVVDRIAERVWKEGALSDMICVPSSYQARKLILDHNLTLGDLDRN 84
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV---DFLGRGM 132
+D+ IDG DE+DS + LIKG GG L++EKI+A A I+I D +K+
Sbjct: 85 CRIDVYIDGADEVDSGMVLIKGGGGCLMQEKIVASCAKSVIIIADYTKKSLRLGEQWCKG 144
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
+PIE+ ++E FG +LR+ +G V+D GN+++D F +
Sbjct: 145 IPIEVAPMAYVPIKHKIEE---LFGGEAQLRIALKKAGPIVTDNGNFLLDWRFVAKREYN 201
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF++M G +DG V +
Sbjct: 202 WYEVNLAISMIPGVLETGLFVDMATKCYFGMADGTVKVQSR 242
>gi|254462856|ref|ZP_05076272.1| ribose 5-phosphate isomerase A [Rhodobacterales bacterium HTCC2083]
gi|206679445|gb|EDZ43932.1| ribose 5-phosphate isomerase A [Rhodobacteraceae bacterium
HTCC2083]
Length = 216
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 1/187 (0%)
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+G R++ +P+S T + I + S ++ +D++IDG DE D L LIKG GGALL+
Sbjct: 5 DGLRIRGVPTSTRTAVLAREVGIEVISLDEARWLDITIDGADEFDGDLNLIKGGGGALLQ 64
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELR 163
EKI+A A+ + IVI D K V+ LG LPIE+ FG T + ++E L ++
Sbjct: 65 EKIVATASDQMIVIADAGKEVENLGAFPLPIEVVPFGWQTTRALVEETLVSMDVLGRQIS 124
Query: 164 LRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
LR NG F++D GNYI+D I + + ++ + +PGV+E+GLFI++ D +IG D
Sbjct: 125 LRMNGGSPFITDEGNYIIDLNLKRIGNARQLAMVVNQMPGVVENGLFIDICDAVVIGHGD 184
Query: 224 GECLVLQ 230
G+ V
Sbjct: 185 GKVEVRD 191
>gi|257387195|ref|YP_003176968.1| ribose-5-phosphate isomerase A [Halomicrobium mukohataei DSM 12286]
gi|257169502|gb|ACV47261.1| ribose 5-phosphate isomerase [Halomicrobium mukohataei DSM 12286]
Length = 226
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 10/231 (4%)
Query: 1 MDA---LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M KR A A + V DGM +G+GTGSTA + + + G V +P+S
Sbjct: 1 MKQGGSDDAKRAAGESAAEAVEDGMVVGLGTGSTAAHAIRAIGAAVDAGLDVTGVPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + IPL D + +DL+IDG D++ L+KG G A REKI+ AA R +V
Sbjct: 61 SRELAREAGIPLTDL-DAAEIDLAIDGADQVAG-GCLVKGGGAAHAREKIVDTAADRLLV 118
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
+ D +K D L +P+E+ + G ELR G V+D G
Sbjct: 119 VVDPTKEADVLD-HPVPLELL----PAARRPVAAAVERLGGEPELRRAERKDGPVVTDNG 173
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
N + D FG I DP ++ +L IPGV+EHGLF+++ D GT+DG +
Sbjct: 174 NLVFDCAFGAIADPAALAADLATIPGVVEHGLFVDVADEIHGGTADGVTVT 224
>gi|58266560|ref|XP_570436.1| ribose-5-phosphate isomerase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134110506|ref|XP_776080.1| hypothetical protein CNBD1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|74685499|sp|Q5KHW6|RPIA_CRYNE RecName: Full=Ribose-5-phosphate isomerase; AltName:
Full=D-ribose-5-phosphate ketol-isomerase; AltName:
Full=Phosphoriboisomerase
gi|50258748|gb|EAL21433.1| hypothetical protein CNBD1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226669|gb|AAW43129.1| ribose-5-phosphate isomerase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 302
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 11/222 (4%)
Query: 20 DGMTLGMGTGSTAKEFMIL-LADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
+ +G+G+GST + LA +P+ ++ + L + + +
Sbjct: 73 EHKVIGIGSGSTVPYVVDRILAQGFEANKDRVFLPTGFQSKELIVKAGLTLGDVDQYARI 132
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD---FLGRGMLPI 135
D++IDG DE+D+ L IKG G LREK++A AA +I++ D K + +PI
Sbjct: 133 DVTIDGADEVDNELNSIKGGGACQLREKVLAEAADTWIIVADYRKNSEVLGTSWTKGIPI 192
Query: 136 EIDQFGVNKTLSALKEVASCFGLNE-----ELRLRRNGSGLFVSDGGNYIVDAFF--GFI 188
E+ F K L+ L + S L LR+ + +G VSD GN+I+DA F +
Sbjct: 193 EVVPFAYAKVLTNLAHMGSPHVLPNGQPGLSLRMGKMKAGPVVSDNGNFIIDAPFAEELM 252
Query: 189 PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
P+ + ++ + GV+E GLF M A G DG +
Sbjct: 253 RQPEELLHKIKMLTGVVEVGLFCGMAKAAYFGNEDGSVTIRS 294
>gi|53714962|ref|YP_100954.1| putative ribose 5-phosphate isomerase [Bacteroides fragilis YCH46]
gi|60682934|ref|YP_213078.1| putative ribose 5-phosphate isomerase [Bacteroides fragilis NCTC
9343]
gi|253566065|ref|ZP_04843519.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265766814|ref|ZP_06094643.1| ribose 5-phosphate isomerase A [Bacteroides sp. 2_1_16]
gi|52217827|dbj|BAD50420.1| putative ribose 5-phosphate isomerase [Bacteroides fragilis YCH46]
gi|60494368|emb|CAH09164.1| putative ribose 5-phosphate isomerase [Bacteroides fragilis NCTC
9343]
gi|251945169|gb|EES85607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253191|gb|EEZ24667.1| ribose 5-phosphate isomerase A [Bacteroides sp. 2_1_16]
gi|301164400|emb|CBW23958.1| putative ribose 5-phosphate isomerase [Bacteroides fragilis 638R]
Length = 233
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K AR V +G +G G+GST ++ +A++I V VIP+S C
Sbjct: 21 ESKEQLARMIAMRVQEGEIIGAGSGSTVYLALLAIAERIRTENLHVTVIPASMEISMECV 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + + D + DG DE+D LIKG GGAL +EK++ +++R ++ DESK
Sbjct: 81 RLGIPQTTLW-MCRPDWTFDGADEVDPDHNLIKGRGGALFKEKLLICSSNRTFILVDESK 139
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
+V F R +PIE+ + EV + L ELRL + G +++ GN I+D
Sbjct: 140 QVSFLGSRFPVPIEVFPMALPYVER---EVLTMGALRTELRLAKGKDGPVITENGNLILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
A+FG I + E+ +I GV+E+GLF+ ++
Sbjct: 197 AWFGNIH--SSLEKEIKSITGVVENGLFMGYDVEVMVAK 233
>gi|329942982|ref|ZP_08291756.1| ribose 5-phosphate isomerase A [Chlamydophila psittaci Cal10]
gi|332287565|ref|YP_004422466.1| ribose 5-phosphate isomerase A [Chlamydophila psittaci 6BC]
gi|313848139|emb|CBY17140.1| putative ribose-5-phosphate isomerase [Chlamydophila psittaci RD1]
gi|325506431|gb|ADZ18069.1| ribose 5-phosphate isomerase A [Chlamydophila psittaci 6BC]
gi|328814529|gb|EGF84519.1| ribose 5-phosphate isomerase A [Chlamydophila psittaci Cal10]
gi|328914814|gb|AEB55647.1| ribose 5-phosphate isomerase A [Chlamydophila psittaci 6BC]
Length = 233
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 8/224 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
++K+ A A V GM LG+G+GST++EF+ +A+K + + SS+ + +
Sbjct: 8 EVKKRLAFEAAHLVEPGMLLGLGSGSTSREFIKAVANKHKQENLDIHAVASSKESYSLAM 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL + E+ + +DL++DG DEID +LR+IKG GGAL REKI+ ++ R +++ DESK
Sbjct: 68 SLGIPLVNDEEFTEIDLAVDGADEIDPQLRMIKGGGGALFREKILLQSSRRRLILADESK 127
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG+ LPIEI FG + ++ G +LR +G G F+++ GNYI D
Sbjct: 128 HVQVLGKFGLPIEISPFGRSSIIA----TLESLGYLGKLRKHPHG-GFFITNNGNYIYDI 182
Query: 184 FFGFI-PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
+ P P+ +L I G+IE G I V G ++G+
Sbjct: 183 HTPNVYPHPEEDLLKLLQIHGIIEVGFVIANV-EVWFGYANGQI 225
>gi|182419736|ref|ZP_02950977.1| ribose 5-phosphate isomerase A [Clostridium butyricum 5521]
gi|237665711|ref|ZP_04525699.1| ribose 5-phosphate isomerase A [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376473|gb|EDT74054.1| ribose 5-phosphate isomerase A [Clostridium butyricum 5521]
gi|237658658|gb|EEP56210.1| ribose 5-phosphate isomerase A [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 226
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK+ A A++Y+ D +G+G GST + + + G V+++ S TE C +
Sbjct: 4 MKKKCAMEALKYIKDKSIIGLGGGSTISYLVSYIKET---GLDVEIVTPSSVTERQCIEN 60
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+ + V S+ ++ DG DEID+ L +K GG +EKIIA A +I++ DESK V
Sbjct: 61 GLKVVPAWAVDSISVAFDGCDEIDNNLTALKSGGGIHTKEKIIASMAEDYILLVDESKVV 120
Query: 126 DFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ L P+ EI + ++ G N +R + G SD G +++D
Sbjct: 121 EKLD-FKYPVVLEIIPESIKIV----EKTVKKLGGNTVMRSSSSKDGFTRSDHGLFLMDV 175
Query: 184 FFG--FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
F + D +++ +L I GV++ LF N+ AI+ +G +++
Sbjct: 176 NFNSEDVDDISVLNDKLKKIVGVVDTSLFYNIATKAIVAGENG-VRIME 223
>gi|169349880|ref|ZP_02866818.1| hypothetical protein CLOSPI_00618 [Clostridium spiroforme DSM 1552]
gi|169293448|gb|EDS75581.1| hypothetical protein CLOSPI_00618 [Clostridium spiroforme DSM 1552]
Length = 221
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+K A A++Y+ D +G+G GST + LA ++++ S T C
Sbjct: 2 NNLKEKCALEALKYIKDQSIVGLGGGSTIAYLVEFLA---KKNLDIKIVTPSYQTAMLCL 58
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H + + V VD++ DG DE+D +L +K G +EKIIA A ++++ DESK
Sbjct: 59 KHQLCVVPTWSVDHVDIAFDGCDEVDLKLNALKSGGAIHTKEKIIASMADDYVLLVDESK 118
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
+ L + IEI + L++ G +R + G +SD G +I++
Sbjct: 119 VFEKLPFDHAITIEIIPESIKYVQKRLEK----LGAIVSMRQSKAKDGYTISDHGMFIME 174
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
A F + D Q + L I G+++ LF+ V+ + DG
Sbjct: 175 AKFKNVEDIQELDNNLKKITGIVDTSLFVGKVNFVLSIDDDGYIR 219
>gi|297527434|ref|YP_003669458.1| ribose 5-phosphate isomerase [Staphylothermus hellenicus DSM 12710]
gi|297256350|gb|ADI32559.1| ribose 5-phosphate isomerase [Staphylothermus hellenicus DSM 12710]
Length = 232
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 13/233 (5%)
Query: 6 MKRNAARRAI----QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+K+ ++ A+ + D LG+GTGST K F+ L ++ +V+ SS T N+
Sbjct: 5 LKKLSSIYALRMFMDKIRDSKILGIGTGSTIKYFIDELI-RLDMLKDKKVVVSSYATLNY 63
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ H I ++P + VD+ +DG DEI+S + +IKG G ALL EK +A + I + D
Sbjct: 64 LRKHGIDAYTPINCDYVDIYVDGLDEINSNMDIIKGRGAALLWEKQLAIRSKLRIYVADY 123
Query: 122 SKR--VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+K +L +PIE+ + L LR+ + G ++D G++
Sbjct: 124 TKVNPEPYLYMKPVPIEVVPNTAYYVIEKL-----AILGKPVLRMGKMKDGPIITDNGDF 178
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQK 231
I+D + I D + + E+ I GV+E GLF N+VD I+ V +
Sbjct: 179 IIDLIYEKIQDARRVDEEIKKINGVVETGLFPNNLVDYVIVSYPGNIIRVYSR 231
>gi|195057355|ref|XP_001995245.1| GH22734 [Drosophila grimshawi]
gi|195069592|ref|XP_001996989.1| GH13924 [Drosophila grimshawi]
gi|193899451|gb|EDV98317.1| GH22734 [Drosophila grimshawi]
gi|193906341|gb|EDW05208.1| GH13924 [Drosophila grimshawi]
Length = 242
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 11/221 (4%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIANG---FRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+ +G+G+GST + +A+++ + +PSS H++ L +
Sbjct: 25 EETKVVGIGSGSTVVFAVERIAERVWKDGALADIICVPSSYQARLLILDHNLTLGDLDRH 84
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML-- 133
S +D+ IDG DE+D+ + LIKG GG LL+EKI+A A + IVI D +K+ LG
Sbjct: 85 SKIDVYIDGADEVDNAMVLIKGGGGCLLQEKIVASCAKKMIVIADYTKKSLRLGEQWCRG 144
Query: 134 -PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF--GFIPD 190
PIE+ ++E FG + ELR+ +G V+D GN+++D F +
Sbjct: 145 IPIEVSPQAHVPVKLKIEE---LFGGHAELRVALMKAGPIVTDNGNFLIDWKFVAKREYN 201
Query: 191 PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ + IPGV+E GLF++M G +DG V K
Sbjct: 202 WDEVNRAITMIPGVMETGLFVDMAIKCYFGMADGTVKVQNK 242
>gi|257457570|ref|ZP_05622737.1| ribose 5-phosphate isomerase A [Treponema vincentii ATCC 35580]
gi|257444956|gb|EEV20032.1| ribose 5-phosphate isomerase A [Treponema vincentii ATCC 35580]
Length = 243
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 20/241 (8%)
Query: 2 DALQMKRNAARRAIQ------YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIP 53
K A AI + GM +G+GTGSTA + LA+ IA G + +P
Sbjct: 6 SVEDQKVLVAHTAIDKLISEGLIHSGMKIGLGTGSTAMPAVKRLAEYIAKGELKDIAAVP 65
Query: 54 SSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+S T C+ ++IP+ S +DL+IDG DEIDS+ LIKG G ALLREKIIA+
Sbjct: 66 TSFQTSIACEEYNIPIFSLSSGRINGVLDLTIDGADEIDSKKNLIKGGGAALLREKIIAY 125
Query: 111 AASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS 169
+ F+VIGDE+K V LPIEI + +G++ +R
Sbjct: 126 NSELFVVIGDETKSVKALGVNFPLPIEIVPEARLSIMKK----LESYGVSMIIRDGIRKK 181
Query: 170 GLFVSDGGNYIVDAFFG---FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
G ++D GN+I+D + I +P + EL IPG+IE+G F + ++G
Sbjct: 182 GPIITDNGNFIMDIKWPLNAKI-NPVKLESELNAIPGIIENGFFTQKSPRVFLSNANGTV 240
Query: 227 L 227
Sbjct: 241 E 241
>gi|224542176|ref|ZP_03682715.1| hypothetical protein CATMIT_01351 [Catenibacterium mitsuokai DSM
15897]
gi|224524902|gb|EEF94007.1| hypothetical protein CATMIT_01351 [Catenibacterium mitsuokai DSM
15897]
Length = 220
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 8/224 (3%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK+ +A+ A++ + DGM +G+G G T + L+ + V+V+ S TE C
Sbjct: 1 MKKRSAKAALELIEDGMIVGLGGGETIGYLVEYLSHSHKD---VKVVTPSFATEQVCIQS 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR- 124
+ L V+ VDLS DG DE+D + +K G REK+IA + R+I++ DESK
Sbjct: 58 GLELLPLWSVNHVDLSFDGCDEVDQDMNALKSGGAIQTREKLIASMSDRYILLLDESKYF 117
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V + E+ + + +KE+ L ++ +G +SD G++IVD
Sbjct: 118 VTLPFLHDITCEVLKEAYSYVSRKIKEMGGKLILRP----NKSKAGPVISDDGHFIVDVH 173
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F I + + ++ +L NI G+I LF+ +V II + +
Sbjct: 174 FDTIENIKELNNKLNNIEGLIATSLFVGLVTDLIISNKEETYRI 217
>gi|148997097|ref|ZP_01824751.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP11-BS70]
gi|147756797|gb|EDK63837.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP11-BS70]
Length = 208
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFC 62
+K+ A +A ++V DGM +G+GTGSTA F+ + +I G ++ + +S T
Sbjct: 2 ENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQA 61
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDES 122
+ +IPL S + V VD+++DG DE+DS+ IKG GGALL EK++A + +I + DES
Sbjct: 62 EGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDES 121
Query: 123 KRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
K V+ LG LP+E+ Q+G + + + R FV+D N+I+D
Sbjct: 122 KLVEKLGAFKLPVEVVQYGAEQVFRHFERAGY------KPSFREKDGQRFVTDMQNFIID 175
Query: 183 AFFGFIPDPQIISGELCNIP 202
I +P EL ++
Sbjct: 176 LALDVIENPIAFGQELDHVV 195
>gi|321263205|ref|XP_003196321.1| ribose-5-phosphate isomerase [Cryptococcus gattii WM276]
gi|317462796|gb|ADV24534.1| Ribose-5-phosphate isomerase, putative [Cryptococcus gattii WM276]
Length = 296
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 15/228 (6%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMIL-LADKIANGFRVQVIPSSRNTENFCKIHHIPLHSP 72
A+++ +G+G+GST + LA +P+ ++ + L
Sbjct: 65 AVEH----KVIGVGSGSTVPYVVDRILAQGFEANKDRVFLPTGFQSKELIVKAGLTLGDV 120
Query: 73 EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD---FLG 129
+ + +D++IDG DE+D+ L IKG G LREK++A AA ++++ D K +
Sbjct: 121 DQYARIDVTIDGADEVDNALNSIKGGGACQLREKVLAEAADTWVIVADYRKNSEVLGTTW 180
Query: 130 RGMLPIEIDQFGVNKTLSALKEVASCFGLNE-----ELRLRRNGSGLFVSDGGNYIVDAF 184
+PIE+ F K L+ L + S L LR+ + +G V+D GN+I+DA
Sbjct: 181 TKGIPIEVVPFAYAKVLTNLAHMGSPHVLPNGQPGLSLRMAKMKAGPVVTDNGNFIIDAP 240
Query: 185 FGF--IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
F + P+ + ++ + GV+E GLF M A G DG +
Sbjct: 241 FSEEQMRKPEELLYKIKMLTGVVEVGLFCGMAKAAYFGNEDGSVTIRS 288
>gi|313900185|ref|ZP_07833685.1| ribose 5-phosphate isomerase A [Clostridium sp. HGF2]
gi|312955237|gb|EFR36905.1| ribose 5-phosphate isomerase A [Clostridium sp. HGF2]
Length = 235
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 9/228 (3%)
Query: 1 MDALQ-MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ +KR +A+RA YV D M LG+GTGST + + L + +QV+ SS ++
Sbjct: 15 MSEMEELKRRSAQRAAAYVQDHMVLGLGTGSTVRWLIEELGRH-TDRQHLQVVSSSLASK 73
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + + P+ + +DL IDG D+I+SR + IKG GGAL+REKI+A AA + I I
Sbjct: 74 LLAQQAGLCVVEPDVIDHIDLVIDGVDQINSRKQAIKGGGGALVREKILAEAAEQVIWIM 133
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D KRV+ + LPIE+ F L + + LR F++D GN
Sbjct: 134 DAGKRVETIEDYTLPIELVPFSHPFVRRTLTKRGY------GVTLRMQQDSAFITDNGNL 187
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
I+D Q EL +I GV+E G F ++ I + G +
Sbjct: 188 ILDVRIPASRTIQEAHDELVHIAGVVETGYF-HIEAMCITAETTGVTI 234
>gi|260946117|ref|XP_002617356.1| hypothetical protein CLUG_02800 [Clavispora lusitaniae ATCC 42720]
gi|238849210|gb|EEQ38674.1| hypothetical protein CLUG_02800 [Clavispora lusitaniae ATCC 42720]
Length = 251
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81
+G+G+GST L + IP+ ++ + + L + E +D++
Sbjct: 42 KVVGVGSGSTVVYVAERLGQ-LPQKASFVCIPTGFQSKQLIIDNGLTLGTIEQFPQIDIA 100
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF---LGRGMLPIEID 138
DG DE+D +L LIKG G L +EK++A AA +F+V+ D K +PIEI
Sbjct: 101 FDGADEVDGKLGLIKGGGACLFQEKLVATAAEKFVVVADYRKESRVLGSQWTKGVPIEIV 160
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNG---SGLFVSDGGNYIVDAFFGFIPDPQIIS 195
K G + LR+ G +G V+D N+++DA FG I DP+ +
Sbjct: 161 PNSYAKV----TLDLKALGAR-TVVLRQGGSAKAGPVVTDNNNFLLDADFGDISDPEALH 215
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++ + GV+E GLF M A G +GE V +
Sbjct: 216 AQIKMLVGVVETGLFTGMATKAYFGQENGEVSVWE 250
>gi|305662496|ref|YP_003858784.1| ribose 5-phosphate isomerase [Ignisphaera aggregans DSM 17230]
gi|304377065|gb|ADM26904.1| ribose 5-phosphate isomerase [Ignisphaera aggregans DSM 17230]
Length = 234
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 12/234 (5%)
Query: 4 LQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIAN---GFRVQVIPSSR 56
+++ A+ +A+ Y+ DG LG+GTGST + F+ L DK + + ++ S
Sbjct: 5 EELRIRASLKALDYLVSLCRDGCILGLGTGSTVRFFINTLLDKGYSYILKKSIVIVSSID 64
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + S S+DL ID DE+D R +IKG GGA+LREKI+ + R I
Sbjct: 65 TALYLLNMGIENIESGLPRDSIDLYIDSADEVDYRRYMIKGGGGAMLREKILTMLSHRKI 124
Query: 117 VIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I DE+K + +PIEI+ F K+ + G E+R +N G ++D
Sbjct: 125 FIVDENKLSPTIGTKKPVPIEIEPFSYPLI----KKYLNDKGYKYEIRYAKNRYGPELTD 180
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
GN I+D + G + +P+ E+ IPGV+ G+F + + II V+
Sbjct: 181 NGNMIIDVYTGPLNNPRDFITEIELIPGVVTTGIFEPLNNSIIIVGKQNTIEVI 234
>gi|85001231|ref|XP_955334.1| ribose 5-phosphate epimerase [Theileria annulata strain Ankara]
gi|65303480|emb|CAI75858.1| ribose 5-phosphate epimerase, putative [Theileria annulata]
Length = 240
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 16/241 (6%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNT 58
+ L + + A +A+ YV + +GTG T+ + LA++I V IP+S++T
Sbjct: 5 NQLSLMKLVAEKAVDTYVKSNSIIALGTGRTSTFSLERLAERIKTKAITNVFGIPTSQST 64
Query: 59 ENFCKIHHIPLHSPEDV----SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ IPL + +D+ ++++IDG D +DS L LIKG GGAL E ++ + +
Sbjct: 65 HLKAEELEIPLLTLDDLISTGRKINIAIDGADSVDSNLNLIKGGGGALFTEFMVEQFSDQ 124
Query: 115 FIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLF 172
I++ DESK + L LPIEI + T + + +N +R +GS LF
Sbjct: 125 LIIMIDESKLCNGHLLESHYLPIEIVKGCHLTTCNQIYSKFKSQIVNWNVRKNSDGS-LF 183
Query: 173 VSDGGNYIVDAFFGFIPDPQIISGELC--NIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
++D GN I+ F I + +L I GV+ GLF+NM ++ SD + L+
Sbjct: 184 LTDNGNLIIIQLFVLIN----LMCKLIYHQIHGVVCSGLFLNMATKCLVAKSDNTIVTLE 239
Query: 231 K 231
+
Sbjct: 240 R 240
>gi|90019293|gb|ABD84297.1| ribose 5-phosphate isomerase-like [Yersinia sp. MH-1]
Length = 184
Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 13 RAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSP 72
A+ YV +G+GTGSTA F+ L I + + V S +T K I +
Sbjct: 5 AALDYVKPDTIVGVGTGSTAAHFIDALG-SIKHQIKGAVSSSDASTAKL-KSLGIHVFDS 62
Query: 73 EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+V +D+ +DG DEI+ +++IKG G AL REKIIA A +FI I D SK+VD LG+
Sbjct: 63 NEVDDLDIYVDGADEINGHMQMIKGGGAALTREKIIAAIARKFICIVDASKQVDVLGKFP 122
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
LP+E+ + G E R V+D GN I+D I D
Sbjct: 123 LPVEVIPMARSYVARE----LVKLGGLPEYRQN------VVTDNGNVILDVHNLDILDAI 172
Query: 193 IISGELCNI 201
+ ++ I
Sbjct: 173 ALENKINGI 181
>gi|213417998|ref|ZP_03351078.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 178
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
G + SS + K I + +V S+ + +DG DEI+ +++IKG G AL R
Sbjct: 2 KGQIEGAVSSSDASTEKLKGLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR 61
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL 164
EKIIA A +FI I D SK+VD LG+ LP+E+ + G E R
Sbjct: 62 EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQ 117
Query: 165 RRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSD 223
V+D GN I+D + I DP + + IPGV+ GLF N D A+IGT D
Sbjct: 118 N------VVTDNGNVILDVYGMEILDPIALENAINAIPGVVTVGLFANRGADVALIGTPD 171
Query: 224 GECLVLQ 230
G +++
Sbjct: 172 GVKTIVK 178
>gi|62185220|ref|YP_220005.1| ribose-5-phosphate isomerase A [Chlamydophila abortus S26/3]
gi|81312618|sp|Q5L5N7|RPIA_CHLAB RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|62148287|emb|CAH64053.1| putative ribose-5-phosphate isomerase [Chlamydophila abortus S26/3]
Length = 233
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 125/224 (55%), Gaps = 8/224 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
++K+ A A V GM LG+G+GST++EF+ +A K ++ + SS+ + + K
Sbjct: 8 EVKKQLALEAANLVEPGMLLGLGSGSTSREFIKAVAHKHKQENLDIRAVASSKESHSLAK 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL E+ + +DL++DG DEID +LR+IKG GGA+ REKI+ ++ R +++ DESK
Sbjct: 68 SLGIPLVDDEEFTEIDLAVDGADEIDPQLRMIKGGGGAIFREKILLQSSRRRLILADESK 127
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG+ LPIEI FG + ++ LK + L + + G F+++ NYI D
Sbjct: 128 HVQVLGKFGLPIEISPFGRSSIIATLKNLGYLGNLR-----KNSHGGFFITNNRNYIYDI 182
Query: 184 FFGFI-PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
+ P P+ +L I G+IE G I V G ++G+
Sbjct: 183 HTPNVYPHPEEDLLKLLQIHGIIEVGFVIASV-EVWFGYANGQI 225
>gi|320656599|gb|EFX24495.1| ribose-5-phosphate isomerase A [Escherichia coli O55:H7 str.
3256-97 TW 07815]
Length = 178
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
G + SS + K I + +V S+ + +DG DEI+ +++IKG G AL R
Sbjct: 2 KGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR 61
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL 164
EKIIA A +FI I D SK+VD LG+ LP+E+ + G E R
Sbjct: 62 EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQ----LVKLGGRPEYRQ 117
Query: 165 RRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSD 223
V+D GN I+D I DP + + IPGV+ GLF N D A+IGT D
Sbjct: 118 G------VVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPD 171
Query: 224 GECLVLQ 230
G +++
Sbjct: 172 GVKTIVK 178
>gi|320104682|ref|YP_004180273.1| ribose 5-phosphate isomerase [Isosphaera pallida ATCC 43644]
gi|319751964|gb|ADV63724.1| ribose 5-phosphate isomerase [Isosphaera pallida ATCC 43644]
Length = 267
Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 7/214 (3%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A++ + G +G+GTG A+ F++ LA K+ G ++ + +S+ TE + IPL +
Sbjct: 10 ALELIRPGDVIGLGTGRAAQAFLVELARKVQEGLEIRGVATSQRTEALARTLGIPLIELD 69
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGM 132
+V +VDL++DG DEI L LIKG GGAL+REK++A A+ RF+V+ K D GRG+
Sbjct: 70 EVETVDLTVDGADEIAPNLDLIKGLGGALIREKMVAAASRRFVVVAGPGKEFDRLGGRGV 129
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLN----EELRLRRNGSGLFVSDGGNYIVDAF--FG 186
LP+E+ F V L ++ RR GLF++D GN +++
Sbjct: 130 LPVEVVPFAVEHLRRRLLKMGFDSRPRMAKVGAEWFRRGLEGLFLTDNGNPLLEVAVTPD 189
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
+ +P + +L ++PGV+ GLF+ M A+IG
Sbjct: 190 QLANPHEVQRQLHDLPGVVGTGLFLGMAQVALIG 223
>gi|15791084|ref|NP_280908.1| ribose-5-phosphate isomerase A [Halobacterium sp. NRC-1]
gi|169236835|ref|YP_001690035.1| ribose-5-phosphate isomerase A [Halobacterium salinarum R1]
gi|34395828|sp|Q9HN33|RPIA_HALSA RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|229564310|sp|B0R7H0|RPIA_HALS3 RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|10581685|gb|AAG20388.1| ribose 5-phosphate isomerase [Halobacterium sp. NRC-1]
gi|167727901|emb|CAP14689.1| ribose-5-phosphate isomerase [Halobacterium salinarum R1]
Length = 225
Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 5 QMKRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ KR A A+ + V +G +G+GTGST + L A V + +S +
Sbjct: 9 EQKRRAGEAAVAEEVTEGAVVGLGTGSTVAHAIRALG---AEASDVSGVATSFESRRRAV 65
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + S + +SVD++IDG D++ L+KG G A REK +A +A RF+V+ D SK
Sbjct: 66 DAGVTVTSL-EAASVDVAIDGADQVA-DGVLVKGGGAAHTREKYVAASADRFVVVADPSK 123
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
D + + V + + G LR G V+D G+ +VD
Sbjct: 124 ESDVVDVPV-----PVAVVPDAWPVVVDRVEALGGTATLRDAERKDGPVVTDTGSLVVDC 178
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
FG I P+ ++ L +PGV+EHGLF+ M D +GT DG +
Sbjct: 179 DFGAIETPEAVAASLSAVPGVVEHGLFVGMADAVYVGTDDGVRV 222
>gi|325968301|ref|YP_004244493.1| ribose 5-phosphate isomerase [Vulcanisaeta moutnovskia 768-28]
gi|323707504|gb|ADY00991.1| ribose 5-phosphate isomerase [Vulcanisaeta moutnovskia 768-28]
Length = 233
Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats.
Identities = 79/221 (35%), Positives = 112/221 (50%), Gaps = 10/221 (4%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHIP--LHS 71
+Y+ D +G+GTGSTA F+ L I + + ++P+S TE + L
Sbjct: 17 KYLRDKYVVGVGTGSTAMAFLRELHKLIISDSIEEILLVPTSTETEIEIIKLGLAHLLRY 76
Query: 72 PEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGR 130
P V+ VD++IDG DE+D R LIKG G AL REKII + A FIVI DE+K +
Sbjct: 77 PWQVNHVDVAIDGADEVDRRKNLIKGGGAALTREKIIDYWAREFIVIVDETKVFPSIPSK 136
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPD 190
+PIE+ F + + L+E G ELR G V+D GNYI+D + +
Sbjct: 137 HPIPIEVIPFAWSIIKARLEE----LGGTAELRFGSGKRGPIVTDNGNYIIDYMPKAVMN 192
Query: 191 PQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVLQ 230
P + + IPGV+E G+F + IIG DG +
Sbjct: 193 PDDMERIIKEIPGVVEVGIFSGKRISKVIIGRIDGSVTTMD 233
>gi|89898178|ref|YP_515288.1| ribose-5-phosphate isomerase A [Chlamydophila felis Fe/C-56]
gi|123483542|sp|Q254Z5|RPIA_CHLFF RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|89331550|dbj|BAE81143.1| ribose 5-phosphate isomerase A [Chlamydophila felis Fe/C-56]
Length = 233
Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 126/222 (56%), Gaps = 8/222 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIH 65
K+ AR A V GM +G+G+GST++EF+ +A+++ + + SS+ + +
Sbjct: 10 KKRLAREAAALVTSGMLVGLGSGSTSREFIKAIAERLAKENLDICAVASSQESYSLASSL 69
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL E+ +SVDL +DG DEID +LR+IKG GGA+ REKI+ ++ R +++ DESK V
Sbjct: 70 GIPLIDDENFTSVDLVVDGADEIDPQLRMIKGGGGAIFREKILLQSSQRRLILADESKSV 129
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG+ LP+EI +G + ++AL+ + L + R G F+++ GNYI D
Sbjct: 130 KVLGKFGLPVEISPYGRSSIIAALEAIGYLGNLRKNSR-----GGFFITNNGNYIYDIHT 184
Query: 186 GFI-PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
I P P+ +L I G+IE G I V G ++G+
Sbjct: 185 PNIYPHPEEDLLKLLQIHGIIEVGFVIANV-EVWFGYTNGQI 225
>gi|329765901|ref|ZP_08257466.1| ribose 5-phosphate isomerase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137607|gb|EGG41878.1| ribose 5-phosphate isomerase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 224
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 121/230 (52%), Gaps = 7/230 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTE 59
M + A+++V DG +G+G+G A F+ L+ I + ++ +P+S +
Sbjct: 1 MSYDDAIEALSTDALKFVKDGFVIGLGSGRAATSFVKSLSSFIKIKNYSIKAVPTSLQIK 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ IPL + V +D+ DG D+IDS+ +IKG GGALLRE I+ + + + +V+
Sbjct: 61 LIAEKGGIPLVEADHVEYIDVVFDGADQIDSQKFVIKGGGGALLRENILFNLSKKVVVMA 120
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V R +P+E+ N + A+++ G N +LR + F ++ GN
Sbjct: 121 DKSKFVKNFTR-EVPVEVHPLARNSVIDAIRK----LGGNAQLR-SLDRGYPFFTENGNI 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
I+D FG I +P+ ++ ++ I GV+E G+F+ D + G+ ++
Sbjct: 175 ILDCNFGTIKNPKSLTQKIKQITGVMESGIFLRKPDVIYKAKTGGKFEII 224
>gi|218708230|ref|YP_002415851.1| putative ribose-5-phosphate isomerase A [Vibrio splendidus LGP32]
gi|218321249|emb|CAV17199.1| putative ribose-5-phosphate isomerase A [Vibrio splendidus LGP32]
Length = 269
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++ AA+ A++ V +G+GTG+T + F+ LL + A + SS
Sbjct: 44 SQDCLRTKAAKVALEQVLKTLTPSSVIGIGTGATVEVFIQLLKESGAEFAH--CVSSSVR 101
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + S + VD IDG DE + +KG G AL REK++A A FI
Sbjct: 102 SSRALSSAGLNEISISECGRVDFYIDGIDEGLTTGMTVKGGGAALAREKVLATLALSFIT 161
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I D + V LG+ LP+E+ +A G + LR +D G
Sbjct: 162 IADSGRLVTQLGKFPLPVEVLPAAQTAVFNA----LQSLGGHPTLRQD------CTTDNG 211
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
N I+D I +P+ + ++ IPGV+E+G+F D ++G L+ ++
Sbjct: 212 NIILDVAHLDIAEPKRLELQINAIPGVVENGIFAQRTADFMAFSNAEGTYLLSKQ 266
>gi|106364384|dbj|BAE95210.1| ribose 5-phosphate isomerase [unclutured Candidatus Nitrosocaldus
sp.]
Length = 230
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA----NGFRVQVIPSSR 56
M+ + M R ++V DGM +G+G+G T + +LA + ++ IP+S
Sbjct: 1 MNTITMTRMLESAVYEHVRDGMIIGLGSGRTVAALLDVLARMSRSMGIDMASIRFIPTSL 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGALLREKIIAHAASRF 115
+ + + + + SVDL DG D+ID+ +IKG GGALLREK++ +AA +
Sbjct: 61 QIKMKAEELKMSIGDESLIPSVDLVFDGADQIDANSLVMIKGGGGALLREKVLMYAAKKV 120
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
+++ DESK VD L +PIE+ + + + +R+ G +++
Sbjct: 121 VILADESKYVDKL-TLPIPIEVVPYARAYVSN----MLRSMYAEPSVRVNDRGY-PIMTE 174
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GN I+D F I DP + L IPGV+E GLF D DG V+ +
Sbjct: 175 NGNIIIDTVFSSIEDPYNLEHRLKCIPGVVEVGLFSKAADLYYKARGDGRFDVIGR 230
>gi|115893585|ref|XP_781272.2| PREDICTED: similar to MGC83218 protein [Strongylocentrotus
purpuratus]
gi|115968323|ref|XP_001197208.1| PREDICTED: similar to MGC83218 protein [Strongylocentrotus
purpuratus]
Length = 280
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 31/235 (13%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILL---------------ADKIAN-GFRVQVIPSSRNTE 59
+V D LG+G+GST + L A+++ +V +P+S +
Sbjct: 56 NHVKDHCRLGVGSGSTIVFAVERLEVYSLNAFIALPRQIAERVKEEKLQVTCVPTSFQAK 115
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + L E + + G L +EKI+A A+ FIVI
Sbjct: 116 QLIVENGLTLSDLERTPE--------TYSRLNTNRYQKFKGCLTQEKIVAANANTFIVIA 167
Query: 120 DESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
D K+ +PIE+ + ++ + FG + ELR+ + +G V+D
Sbjct: 168 DYRKQSSDLGINWTKGIPIEVIPMAYRPVIKTIQ---TKFGGSPELRMAKAKAGPVVTDN 224
Query: 177 GNYIVDAFFGFIPD-PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
GN+I+D F P+ ++ EL IPGV++ GLFINM A G +DG +
Sbjct: 225 GNFILDWKFDKNPEKWDTVNRELMMIPGVVDTGLFINMAKRAYFGMADGSVQIQD 279
>gi|170289629|ref|YP_001736445.1| ribose 5-phosphate isomerase [Candidatus Korarchaeum cryptofilum
OPF8]
gi|229564311|sp|B1L7D5|RPIA_KORCO RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|170173709|gb|ACB06762.1| ribose 5-phosphate isomerase [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 225
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 129/226 (57%), Gaps = 9/226 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR AR A++ + D LG+G+GST F+ LA G +++VIPSS+ E +
Sbjct: 6 KRLVAREALKLIGDVKLLGLGSGSTVAIFVEELAKSDKAG-KIKVIPSSKQIEEVARNQG 64
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+ + P D ++++DG DEIDS L L+KG GGALLREK++A+ +S +++I D +K V+
Sbjct: 65 LEVIYP-DGERPEITVDGADEIDSNLNLLKGGGGALLREKVLAYNSSTYVIIADHTKLVE 123
Query: 127 -FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+ LP+E+ +GV+ TL L + N + R+R F++D GN IVD
Sbjct: 124 KLCSKRALPVEVLPYGVSWTLGNLIKRF-----NCDARIRIKDLSPFITDNGNVIVDINC 178
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ DP + E+ +PGV+E G+F+ + D +I E VL++
Sbjct: 179 PPLEDPASMESEVKGVPGVVEVGIFVGLADLVLIARGS-EVKVLRQ 223
>gi|86146538|ref|ZP_01064860.1| ribose 5-phosphate isomerase [Vibrio sp. MED222]
gi|85835595|gb|EAQ53731.1| ribose 5-phosphate isomerase [Vibrio sp. MED222]
Length = 235
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 17/235 (7%)
Query: 2 DALQMKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++ AA+ A++ V +G+GTG+T + F+ LL + A + SS
Sbjct: 10 SQDCLRTKAAKVALEQVLKTLTPSSVIGIGTGATVEVFIQLLKESGAEFAH--CVSSSVR 67
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + S + VD IDG DE + +KG G AL REK++A A FI
Sbjct: 68 SSRALSSAGLNEISISECGRVDFYIDGIDEGLTTGMTVKGGGAALAREKVLATLALSFIT 127
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
I D + V LG+ LP+E+ +A G + LR +D G
Sbjct: 128 IADSGRLVTQLGKFPLPVEVLPAAQTAVFNA----LQSLGGHPTLRQD------CTTDNG 177
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQK 231
N I+D I +P+ + ++ IPGV+E+G+F D ++G L+ ++
Sbjct: 178 NIILDVAHLDIAEPKRLELQINAIPGVVENGIFAQRTADFMAFSNAEGTYLLSKQ 232
>gi|269303022|gb|ACZ33122.1| ribose 5-phosphate isomerase A [Chlamydophila pneumoniae LPCoLN]
Length = 231
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 125/212 (58%), Gaps = 7/212 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ A A V GM LG+G+GSTAKEF+ LA +I V I SS+N+ K
Sbjct: 10 KKCLAHEAATQVTSGMILGLGSGSTAKEFIFALAHRIQTESLAVHAIASSQNSYVLAKQL 69
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL +PE SS+DL++DG DE+D +LR+IKG GGA+ REKI+ AA R I++ DESK V
Sbjct: 70 AIPLLNPEKFSSLDLTVDGADEVDPQLRMIKGGGGAIFREKILLRAAKRSIILVDESKLV 129
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF- 184
LG+ +P+EI +FG SA+ E G E RL+ G LF++D GNYI D F
Sbjct: 130 PVLGKFRVPLEISRFG----RSAIVEEIRHLGYEGEWRLQDTGD-LFITDSGNYIYDIFS 184
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDC 216
P+P+ +L I GVIE G I V+
Sbjct: 185 PNSYPNPEKDLLKLIQIHGVIEVGFVIEKVEV 216
>gi|255011112|ref|ZP_05283238.1| putative ribose 5-phosphate isomerase [Bacteroides fragilis 3_1_12]
gi|313148922|ref|ZP_07811115.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137689|gb|EFR55049.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 233
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K AR V +G +G G+GST ++ +A++I V VIP+S C
Sbjct: 21 ESKERLARMIAMRVQEGEVIGAGSGSTVYLALLAIAERIRTENLHVTVIPASMEISMECV 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + + D + DG DE+D LIKG GGAL +EK++ +++R ++ DESK
Sbjct: 81 RLGIPQTTLW-MCRPDWTFDGADEVDPDRNLIKGRGGALFKEKLLISSSNRTFILVDESK 139
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
+V F R +P+E+ + ++ + + +LR + G +++ GN I+D
Sbjct: 140 QVSFLGSRFPVPVEVFPMALPYVEREIRAMGAS---RTQLRPAKGKDGPVITESGNLILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
A+F I + E+ ++ GVIE+GLF+ ++
Sbjct: 197 AWFSNIH--SSLEKEIKSVTGVIENGLFMGYDVEVMVAK 233
>gi|218281283|ref|ZP_03487780.1| hypothetical protein EUBIFOR_00344 [Eubacterium biforme DSM 3989]
gi|218217530|gb|EEC91068.1| hypothetical protein EUBIFOR_00344 [Eubacterium biforme DSM 3989]
Length = 226
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 10/223 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK+ A A + V DGM +G+G GST + + DK ++V+ S T +
Sbjct: 3 MKKKCALYASKLVKDGMVVGLGGGSTISYLIDYVKDK-----DIKVVSPSSKTVLLAQKM 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+ + + + V VD++ DG DE+DS L +K GG +EKIIA A +IV+ DESK
Sbjct: 58 GLTVLNTQYVDHVDIAFDGCDEVDSHLNALKSGGGIHTQEKIIASMAGEYIVLVDESKFH 117
Query: 126 DFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+ L + + +E+ + K+ N ELR N G +SD GN ++D +
Sbjct: 118 ETLAFKVPVVVEVLPKAYSIV----KKKIEKLNGNIELRTASNKDGFLMSDEGNILLDVY 173
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
F + D ++++ L +PGV++ LF++++ I+ G
Sbjct: 174 FDGVQDIRLLNQTLLMMPGVVDTSLFVDILTGMILVNDKGVFK 216
>gi|29840390|ref|NP_829496.1| ribose-5-phosphate isomerase A [Chlamydophila caviae GPIC]
gi|33301617|sp|Q822P7|RPIA_CHLCV RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|29834739|gb|AAP05374.1| ribose 5-phosphate isomerase [Chlamydophila caviae GPIC]
Length = 233
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 8/224 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
++KR+ AR A V GM LG+G+GST++EF+ +A++ ++ + SS+ + +
Sbjct: 8 EVKRHLAREAAALVTSGMLLGLGSGSTSREFIKAVAERKKQENLDIRAVASSKESYSLAS 67
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IPL E+ + DL++DG DEID +LR+IKG GGA+ REKI+ ++ R +++ DESK
Sbjct: 68 SLGIPLIDDEEFINTDLAVDGADEIDPQLRMIKGGGGAIFREKILLQSSQRRLILADESK 127
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V LG+ LP+EI FG + ++ L+ L + R G F+++ GNYI D
Sbjct: 128 SVKVLGKFGLPVEISPFGRSSIIATLENFGYLGNLRKNPR-----GGFFITNNGNYIYDI 182
Query: 184 FFGFI-PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
+ P P+ +L I G+IE G I V +G ++G+
Sbjct: 183 HTPNVYPHPEEDLLKLLQIHGIIEAGFVIENV-EVWLGYTNGQI 225
>gi|313900398|ref|ZP_07833891.1| ribose 5-phosphate isomerase A [Clostridium sp. HGF2]
gi|312954460|gb|EFR36135.1| ribose 5-phosphate isomerase A [Clostridium sp. HGF2]
Length = 222
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
MK+ A++A+ Y+ DGM +G+G GST LA + G +VQ++ S TE C
Sbjct: 1 MKKRCAQKALAYIQDGMVIGLGGGSTIAH----LARFVKESGKQVQIVTPSLETETLCIK 56
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+PL +S VD++ DG DE D + +K GG REK+IA+ A ++++ DESK
Sbjct: 57 LGLPLLPLRQISHVDIAFDGCDEADRQFYALKSGGGIHAREKLIANMAEEYMLLIDESKL 116
Query: 125 VDFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
D L + +P+ E+ + ++E + G +SD GN + D
Sbjct: 117 SDTL-QFHVPVVMELLEDATAYVKRRVEE----LQGRFVCKHGEGKYGAVMSDHGNVLAD 171
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+F + DP+ ++ L +I GV++ L V ++ + G +L+K
Sbjct: 172 VWFDKVGDPKKLNHALKSIAGVVDTSLLTREVTAILVVSDQG-FELLKK 219
>gi|15618065|ref|NP_224349.1| ribose-5-phosphate isomerase A [Chlamydophila pneumoniae CWL029]
gi|15835676|ref|NP_300200.1| ribose-5-phosphate isomerase A [Chlamydophila pneumoniae J138]
gi|16752902|ref|NP_445173.1| ribose-5-phosphate isomerase A [Chlamydophila pneumoniae AR39]
gi|33241477|ref|NP_876418.1| ribose-5-phosphate isomerase A [Chlamydophila pneumoniae TW-183]
gi|6226030|sp|Q9Z942|RPIA_CHLPN RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|4376406|gb|AAD18294.1| Ribose-5-P Isomerase A [Chlamydophila pneumoniae CWL029]
gi|7189545|gb|AAF38446.1| ribose 5-phosphate isomerase [Chlamydophila pneumoniae AR39]
gi|8978514|dbj|BAA98351.1| ribose-5-P isomerase A [Chlamydophila pneumoniae J138]
gi|33235985|gb|AAP98075.1| ribose-5-phosphate isomerase [Chlamydophila pneumoniae TW-183]
Length = 231
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 7/212 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ A A V GM LG+G+GSTAKEF+ LA +I V I SS+N+ K
Sbjct: 10 KKCLAHEAATQVTSGMILGLGSGSTAKEFIFALAHRIQTESLAVHAIASSQNSYALAKQL 69
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL +PE SS+DL++DG DE+D +LR+IKG GGA+ REKI+ AA R I++ DESK V
Sbjct: 70 AIPLLNPEKFSSLDLTVDGADEVDPQLRMIKGGGGAIFREKILLRAAKRSIILVDESKLV 129
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
LG+ +P+EI +FG + + ++ G E RL+ G LF++D NYI D F
Sbjct: 130 PVLGKFRVPLEISRFGRSAIIEEIRH----LGYEGEWRLQDTGD-LFITDSSNYIYDIFS 184
Query: 186 GF-IPDPQIISGELCNIPGVIEHGLFINMVDC 216
P+P+ +L I GVIE G I V+
Sbjct: 185 PNSYPNPEKDLLKLIQIHGVIEVGFVIEKVEV 216
>gi|119597473|gb|EAW77067.1| ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase),
isoform CRA_b [Homo sapiens]
Length = 272
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 40 ADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYG 99
A++ + + + + L + +DL+IDG DE+D+ L LIKG G
Sbjct: 78 AEEAKKLAGRAAVENHVRARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGG 137
Query: 100 GALLREKIIAHAASRFIVIGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCF 156
G L +EKI+A ASRFIVI D K +PIE+ A+ + F
Sbjct: 138 GCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQ---KF 194
Query: 157 GLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDC 216
G ELR+ N +G V+D GN+I+D F + ++ + IPGV++ GLFINM +
Sbjct: 195 GGVVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAER 254
Query: 217 AIIGTSDGECLVLQK 231
G DG + +K
Sbjct: 255 VYFGMQDGSVNMREK 269
>gi|270296861|ref|ZP_06203060.1| ribose 5-phosphate isomerase A [Bacteroides sp. D20]
gi|270272848|gb|EFA18711.1| ribose 5-phosphate isomerase A [Bacteroides sp. D20]
Length = 234
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 8/217 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K A+ DG +G G+GST + LA ++ +++IP+S C
Sbjct: 23 KELVAQEIAGLAKDGDVIGAGSGSTVYLTLFALAQRVKQESLHIEIIPASAEISMTCIQL 82
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P + D + DG DE+D LIKG GGA+ +EK++ ++ + +I DESK V
Sbjct: 83 GLPQTTLW-NKRPDWTFDGADEVDPHNNLIKGRGGAMFKEKLLIKSSGKTYIIVDESKLV 141
Query: 126 -DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+ +P+E+ ++ + ++ + + LRL G ++ GN+I+D
Sbjct: 142 SKLGSKYPIPVEVFPHALSHVENEIRLLGAS---KISLRLAERKDGPVFTENGNFILDIH 198
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
I + +L I GVIE+GLFI ++
Sbjct: 199 LSNIV--PDLEQKLKAITGVIENGLFIGYDITVLMAN 233
>gi|164656849|ref|XP_001729551.1| hypothetical protein MGL_3095 [Malassezia globosa CBS 7966]
gi|159103444|gb|EDP42337.1| hypothetical protein MGL_3095 [Malassezia globosa CBS 7966]
Length = 251
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 9/213 (4%)
Query: 21 GMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
+G+G+GST + + ++ + +P+S +N ++ L + +D
Sbjct: 31 HQLIGIGSGSTVPYVVERIYERGEKVNNSCRFVPTSFQAKNLIIERNLNLGDMDTGLQLD 90
Query: 80 LSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV---DFLGRGMLPIE 136
++IDG DE+D+ L LIKG G LREK++A AA F+V+ D K R +P+E
Sbjct: 91 VTIDGADEVDASLNLIKGGGACHLREKVLAEAAKEFVVVADFRKMSMVLGENWRKGVPVE 150
Query: 137 IDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF--IPDPQII 194
+ F L +L+ + S + +LR+ +G V+D GN +DA F + +P +
Sbjct: 151 VAPFAAKHVLKSLERLGST---DAKLRMAVAKAGPVVTDNGNLCIDAVFPESIMRNPDHL 207
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
++ + GV+E G+F N+ A G DG
Sbjct: 208 LKQIKLLTGVVEVGIFTNICKAAYFGNEDGSIT 240
>gi|242819189|ref|XP_002487266.1| ribose 5-phosphate isomerase A [Talaromyces stipitatus ATCC 10500]
gi|218713731|gb|EED13155.1| ribose 5-phosphate isomerase A [Talaromyces stipitatus ATCC 10500]
Length = 326
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 44/265 (16%)
Query: 7 KRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
KR AA+ A+Q Y ++ +G+G+G+T + + + + + +P+ ++ K
Sbjct: 62 KRAAAKVAVQNHYPLNAKWVGIGSGTTIVYVVEAIKELGIDTSLTRFVPTGYQSKQLIKQ 121
Query: 65 HHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + + +D++ DG DE+D L IKG G L +EKI+A A FI + D
Sbjct: 122 AGLTAVEFDALPEDVVLDVAFDGADEVDDDLNCIKGGGACLFQEKIVALQAKEFICVADS 181
Query: 122 SKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR-NGSGLFVSDGGN 178
K + +PIE+ N+ + L E+ S +RL G +D G
Sbjct: 182 RKLQNRLLTNWKYIPIEVAPIAANRVIRKLTELGSI---KPAIRLNTVAKEGPLKTDQGF 238
Query: 179 YIVDAFFGFIPDP------------------QIISGELCNIPGVIEHGLFIN-------- 212
+IVDA F + P + ++ ++ IPGV+E G+F
Sbjct: 239 FIVDAPFLPLLTPSDVKAGKDGNGTDGVWEVETLANKIKAIPGVLEVGIFCGVTGPEAQS 298
Query: 213 -------MVDCAIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 299 LGSTGGQKPVAAYFGMPDGTVTVRK 323
>gi|149276630|ref|ZP_01882773.1| Ribose 5-phosphate isomerase [Pedobacter sp. BAL39]
gi|149232299|gb|EDM37675.1| Ribose 5-phosphate isomerase [Pedobacter sp. BAL39]
Length = 227
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ K+ AA A + + G +G+G GST + +A A + S +T
Sbjct: 1 MN--NYKQQAATEAFKLISKGQVIGLGAGSTIAYLVKTIAADHALASTLTFSSPSYDTVI 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H + + + + VDL DG D++D +L +K GG EKI+A A F+++GD
Sbjct: 59 MLNDHRLNVKPSDFLQGVDLYFDGCDQLDWQLNALKSGGGIHTYEKILAVMADEFVLLGD 118
Query: 121 ESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
K V+ L IE+ +N + L++ G++ +R G +DGG Y
Sbjct: 119 YGKLVEHLDVTYPLVIEVLPQALNVVSAILRKQFK--GISLIIRTGDQRVGPVRTDGGCY 176
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++DA F +P +++ ++ IPGV++H LF + D AI+ +G + QK
Sbjct: 177 LIDASFVTLPGLELL-DQIKMIPGVVDHSLFFKLADKAILAGPEGIRTITQK 227
>gi|332298818|ref|YP_004440740.1| Ribose-5-phosphate isomerase A [Treponema brennaborense DSM 12168]
gi|332181921|gb|AEE17609.1| Ribose-5-phosphate isomerase A [Treponema brennaborense DSM 12168]
Length = 242
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 1 MDALQMKRNAARRAIQ------YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVI 52
M + K+ A AI + GM +G+GTGSTA + LA +IA+G ++ +
Sbjct: 6 MTQAEQKKLAGATAIDILIERKLIFSGMKIGLGTGSTALPAVERLARRIADGTLSGIKAV 65
Query: 53 PSSRNTENFCKIHHIPLHSPED---VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+S T C+ IP++S +DL+IDG DEI LIKG G ALLREKI+A
Sbjct: 66 ATSFQTTIACEQLDIPVYSLNAKEIGGKLDLAIDGADEISPEGYLIKGGGAALLREKIVA 125
Query: 110 HAASRFIVIGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG 168
+ A+ F V+ D SK V LP+EI + L+++ + L E +R
Sbjct: 126 YNAAHFAVVADSSKEVASLGTGFALPVEIIAEARVSIVRELEQLGAACTLREGIR----K 181
Query: 169 SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+G V+D GN I+D + D + + I GV+++ F + DG V
Sbjct: 182 AGPVVTDNGNLILDVQWQNPVDAAAMEDAVNRITGVLDNVFFTKKKPMIFVA--DGTGTV 239
Query: 229 LQK 231
++
Sbjct: 240 RER 242
>gi|296242411|ref|YP_003649898.1| ribose 5-phosphate isomerase [Thermosphaera aggregans DSM 11486]
gi|296094995|gb|ADG90946.1| ribose 5-phosphate isomerase [Thermosphaera aggregans DSM 11486]
Length = 236
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 118/233 (50%), Gaps = 13/233 (5%)
Query: 4 LQMKRNAARRAIQYVVDGM----TLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
Q K NAA +A +++ +G+GTGST K+F+ + D + N ++ V S
Sbjct: 5 DQAKLNAAVKACEFLKSNFNFIGIIGLGTGSTIKKFINVCKDLLEN--KIIVPSSFDTAI 62
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ + + P SVD+ IDG DE+ +L ++KG GGA LREK IA A + +
Sbjct: 63 YLVNMGYSNIRDPITARSVDVYIDGADEVSEKLDMVKGRGGAFLREKSIALRAKTRVYVI 122
Query: 120 DESKR--VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGG 177
D SK +L +PIE+ + L +K + + + LR+ + G V+D G
Sbjct: 123 DHSKFTGKPYLYLKPIPIEVIPAALPVVLDGVKSLGN---VEAVLRMDSSKDGPVVTDNG 179
Query: 178 NYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLV 228
N+I+D F I +P ++ + I GV+E G+F + +VD ++G D L+
Sbjct: 180 NFIIDLRFTSPILEPAVMHERIKRIHGVVETGIFPSFLVDYVVVGYPDKTVLL 232
>gi|161527726|ref|YP_001581552.1| ribose 5-phosphate isomerase [Nitrosopumilus maritimus SCM1]
gi|160339027|gb|ABX12114.1| ribose 5-phosphate isomerase [Nitrosopumilus maritimus SCM1]
Length = 224
Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 7/209 (3%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHHIPLHSP 72
A+++V D +G+G+G A + L I + ++ +P+S + + IPL
Sbjct: 14 ALKFVKDDYVVGLGSGRAATVLVKSLGKLIKLKNYNIKGVPTSLQIKLIAEKVGIPLIEA 73
Query: 73 EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+ V +D+ DG D+IDS+ +IKG GGALLRE I+ A + +V+ D++K V R
Sbjct: 74 DQVEHIDVVFDGADQIDSQKFVIKGGGGALLRENILFSLAKKVVVMADKTKFVKNFTR-T 132
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
+P+E+ N ++K+ G ELR + F ++ GN I+D FG I +P+
Sbjct: 133 VPVEVHPLARNSVSKSMKK----LGGKAELR-SLDRGYPFFTENGNIILDCDFGTIKNPK 187
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGT 221
++ ++ GV+E G+F+ D
Sbjct: 188 ALTQKIKATTGVLESGIFLRKPDVIYRAK 216
>gi|261250722|ref|ZP_05943296.1| ribose 5-phosphate isomerase A [Vibrio orientalis CIP 102891]
gi|260937595|gb|EEX93583.1| ribose 5-phosphate isomerase A [Vibrio orientalis CIP 102891]
Length = 234
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 96/232 (41%), Gaps = 19/232 (8%)
Query: 1 MDALQ-MKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
MD+ ++ AA+ A+ V +G+GTG+T + F+ LL A + SS
Sbjct: 10 MDSSDCLRTKAAKAALDQVLRVLTPSSVIGIGTGATVEIFIQLLKQSGAEFSH--CVSSS 67
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
+ + + VD+ +DG DE S +KG G AL REK++A A F
Sbjct: 68 ERSSKALQQAGLSEQPISSCERVDVYVDGIDEGLSSGETVKGGGAALAREKVLATMAMSF 127
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I I D + LG LPIE+ A G R +D
Sbjct: 128 ITIADSGRLKLALGTFPLPIEVLPAAELAVTHA----LQSLGGTPVRREG------CTTD 177
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGEC 226
GN I+D + +PQ + L +IPGV+E+G+F D + DG
Sbjct: 178 NGNIILDCSGLDLSEPQALEVSLNSIPGVVENGIFARRKADYMAF-SDDGGV 228
>gi|309778260|ref|ZP_07673190.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
3_1_53]
gi|308913987|gb|EFP59797.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
3_1_53]
Length = 221
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCKI 64
MK AR A+QY+ DGM +G+G GST LA + G +VQ++ S+ TE C
Sbjct: 1 MKERCAREALQYIQDGMIIGLGGGSTIAH----LARFVKESGKQVQIVTPSQETEALCVE 56
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+PL V+ VD++ DG DE D RL +K GG +REK+IA+ A ++++ D+SK
Sbjct: 57 LGLPLLPLRQVAHVDIAFDGCDEADRRLYALKSGGGIHVREKLIANMADTYMLLIDDSKL 116
Query: 125 VDFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
D L + +P+ E+ + ++E G + G +SD GN + D
Sbjct: 117 SDTL-QFRVPVVLELLEDSCGYVKRRVEE----LGGKFTFKHGDGKYGALMSDHGNVLAD 171
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
A F + DP+ ++ L +I GVI+ L V ++ ++ G +L+K
Sbjct: 172 AEFTQVEDPKKLNHALKSIAGVIDTSLLTREVSAILVVSASG-FSLLKK 219
>gi|160890284|ref|ZP_02071287.1| hypothetical protein BACUNI_02725 [Bacteroides uniformis ATCC 8492]
gi|317479164|ref|ZP_07938302.1| ribose 5-phosphate isomerase A [Bacteroides sp. 4_1_36]
gi|156860016|gb|EDO53447.1| hypothetical protein BACUNI_02725 [Bacteroides uniformis ATCC 8492]
gi|316904676|gb|EFV26492.1| ribose 5-phosphate isomerase A [Bacteroides sp. 4_1_36]
Length = 234
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K A+ DG +G G+GST + LA ++ +++IP+S C
Sbjct: 23 KELVAQEIAGLAKDGDVIGAGSGSTVYLTLFALAQRVKQESLHIEIIPASAEISMTCIQL 82
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P + D + DG DE+D LIKG GGA+ +EK++ ++ + +I DESK V
Sbjct: 83 GLPQTTLW-NKRPDWTFDGADEVDPHNNLIKGRGGAMFKEKLLIKSSGKTYIIVDESKLV 141
Query: 126 -DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+ +P+E+ ++ + ++ + + LRL G ++ GN+I+D
Sbjct: 142 SKLGSKYPIPVEVFPHALSHVENEIRLLGAS---KISLRLAEGKDGPVFTESGNFILDIH 198
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
I + +L I GVIE GLFI ++
Sbjct: 199 LSNIV--PDLEQKLKAITGVIESGLFIGYDITVLMAN 233
>gi|149189486|ref|ZP_01867770.1| Ribose 5-phosphate epimerase [Vibrio shilonii AK1]
gi|148836643|gb|EDL53596.1| Ribose 5-phosphate epimerase [Vibrio shilonii AK1]
Length = 234
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 94/225 (41%), Gaps = 17/225 (7%)
Query: 6 MKRNAARRAIQYV----VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++ AA+ A+++V +G+GTG+T + F+ LL A + SS+ +
Sbjct: 16 LRAKAAQVALEHVMKALTPSSVIGIGTGATVEVFIQLLKHSGATFSH--CVSSSKRSSAA 73
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
I + VD +DG DE S +KG G AL REK++A A FI I D
Sbjct: 74 LAAAGINELPIDQCDRVDFYVDGIDEGLSNGTTVKGGGAALAREKVLATLAMSFITIADS 133
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
+ + LG LPIE+ L A G N R V+D GN I+
Sbjct: 134 GRLKESLGEFPLPIEVLPAAELAVLRA----LQSLGGNPIRRKN------CVTDNGNLII 183
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGE 225
D + D L +IPGV+E+G+F D G
Sbjct: 184 DCAGLDLSDSTATELSLNSIPGVVENGIFSRRKADFMAFSGESGV 228
>gi|298479682|ref|ZP_06997882.1| ribose 5-phosphate isomerase A [Bacteroides sp. D22]
gi|298274072|gb|EFI15633.1| ribose 5-phosphate isomerase A [Bacteroides sp. D22]
Length = 233
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K + AR DG +G+G+GST + LA +I ++VIP+S+ C
Sbjct: 21 EAKEHVAREIAATAKDGDVIGVGSGSTVYLTLFELARRIREEHLHIEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D + DG DE+D + LIKG GGA+ +EK++ ++ + +I D SK
Sbjct: 81 QLGIPQTTLW-NKRPDWTFDGADEVDPQRNLIKGRGGAMFKEKLLTRSSRKTFIIIDPSK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEEL-RLRRNGSGLFVSDGGNYIV 181
RV + +P+E+ + + G +E + R G ++ GN+I+
Sbjct: 140 RVNQLGNKFPIPVEVFPDSLTYV----EHELQRLGASEIVLRPAHGKDGPVFTENGNFIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
D F +I + +L I GVIE GLFI I+
Sbjct: 196 DTRFNYID--SSLEEQLKTITGVIESGLFIGYDVEVIMA 232
>gi|315640518|ref|ZP_07895626.1| ribose 5-phosphate isomerase [Enterococcus italicus DSM 15952]
gi|315483722|gb|EFU74210.1| ribose 5-phosphate isomerase [Enterococcus italicus DSM 15952]
Length = 222
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK+ A+ A+ Y+ +G+G GST + ++ A V ++ S T C+
Sbjct: 1 MKKRCAQYALDYIKPHSIIGLGGGSTIAYLVEMI---QAKQLDVTIVTPSVTTAKLCQAA 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+ + V V ++ DG DE+D L +K GG +EK+IA A +I++ DESK
Sbjct: 58 ELTVVPMSQVDHVTVAFDGCDEVDGHLNALKSGGGIHTKEKVIATMADDYILLVDESKVS 117
Query: 126 DFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
D L + L +E+ + K K G R+ G ++ GN +++
Sbjct: 118 DTLSFKVPLVLEVLPQALAKV----KADVLRLGYQVTARMSATSDGYTYTENGNLLLEVT 173
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+ I+ + I G++E LF + AI+ T++G+ ++
Sbjct: 174 IDSGT-CEAIAQQFSAIVGIVETSLFYQIATKAIVVTTEGKRII 216
>gi|293374881|ref|ZP_06621182.1| ribose 5-phosphate isomerase A [Turicibacter sanguinis PC909]
gi|325843182|ref|ZP_08167868.1| ribose 5-phosphate isomerase A [Turicibacter sp. HGF1]
gi|292646484|gb|EFF64493.1| ribose 5-phosphate isomerase A [Turicibacter sanguinis PC909]
gi|325489426|gb|EGC91796.1| ribose 5-phosphate isomerase A [Turicibacter sp. HGF1]
Length = 219
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 103/217 (47%), Gaps = 8/217 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ A+ A++ + +G+G GST + + + N VQ++ S T+ C
Sbjct: 1 MDIKQKCAKEALKLIPKSGVIGLGGGSTISYLIDEIKE---NKLNVQIVTPSVKTKMLCL 57
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + P + +D++ DG DE+D+ +K GG REK+IA + ++++ DE+K
Sbjct: 58 EKELTVLDPMAIHQIDIAFDGCDEVDANFNALKSGGGIHTREKLIASMSKDYVLLIDETK 117
Query: 124 RVDFLGRGMLPI-EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
+ L + E+ + ++ + + G +R G +++ G+Y++D
Sbjct: 118 FSEVLTFKHPVVLEVLESAISYVQYEVLK----LGGVPVMRHSSAKDGFTITENGHYLMD 173
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAII 219
F + D + ++ +L I GVI LF V +I
Sbjct: 174 VTFSQVSDIKELNVKLNEICGVIGTSLFTKEVTKVLI 210
>gi|189465916|ref|ZP_03014701.1| hypothetical protein BACINT_02279 [Bacteroides intestinalis DSM
17393]
gi|189434180|gb|EDV03165.1| hypothetical protein BACINT_02279 [Bacteroides intestinalis DSM
17393]
Length = 233
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCK 63
+ K AR +G +G G+GST + LA++I ++VIP+S C
Sbjct: 21 EGKEIVAREIAAMAEEGDVIGAGSGSTVYLTLFALAERIRKESLHIEVIPASAEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D + DG DE+D LIKG GGA+ +EK++ ++ + +I D++K
Sbjct: 81 QLGIPQTTLW-NKRPDWAFDGADEVDPERSLIKGRGGAMFKEKLLIKSSGKNFIIIDDTK 139
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD R +P+E+ + S ++ + + LRL G +++ GN+I+D
Sbjct: 140 LVDHLGSRFPIPVEVFPSALTFVESEMRRLGASEI---TLRLADGKDGPVLTENGNFILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
F +I DP + L I GVIE GLFI ++
Sbjct: 197 TRFSYI-DPS-LEENLKMITGVIESGLFIGYDVEIVVAK 233
>gi|329954955|ref|ZP_08295972.1| ribose 5-phosphate isomerase A [Bacteroides clarus YIT 12056]
gi|328527059|gb|EGF54070.1| ribose 5-phosphate isomerase A [Bacteroides clarus YIT 12056]
Length = 233
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 8/216 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIH 65
K A+ +G +G G+GST + LA++I +++IP+S C
Sbjct: 23 KERVAKEVADIAKNGDIIGAGSGSTVYLTLFALAERIRKEALHIEIIPASNEISMTCIQL 82
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+IP + D + DG DE+D + LIKG GGA+ +EK++ ++ + +I D SK+V
Sbjct: 83 NIPQTTLW-NKRPDWTFDGADEVDPQHNLIKGRGGAMFKEKLLIKSSDKSYIIIDPSKKV 141
Query: 126 D-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+ + +P+E+ +N ++ + + LRL G +++ GN+I+D
Sbjct: 142 ERLGSKFPVPVEVFPGALNHAEQEIRRLGASEI---TLRLAVGKDGPILTENGNFILDVR 198
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
F I + +L +I GVIE GLFI I
Sbjct: 199 FDTIG--SGLEQQLKSITGVIESGLFIGYDVEIITA 232
>gi|293371089|ref|ZP_06617626.1| ribose 5-phosphate isomerase A [Bacteroides ovatus SD CMC 3f]
gi|292633747|gb|EFF52299.1| ribose 5-phosphate isomerase A [Bacteroides ovatus SD CMC 3f]
Length = 233
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K + AR DG +G G+GST + L+ +I ++VIP+S+ C
Sbjct: 21 EAKEHVAREIAATAKDGDVIGAGSGSTVYLTLFELSRRIREEHLHIEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D + DG DE+D + LIKG GGA+ +EK++ ++ + +I D SK
Sbjct: 81 QLGIPQTTLW-NQRPDWTFDGADEVDPQQNLIKGRGGAMFKEKLLIRSSRKTFIIIDPSK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEEL-RLRRNGSGLFVSDGGNYIV 181
RV + +P+E+ + + G +E + R R G ++ GN+I+
Sbjct: 140 RVNQLGSKFPIPVEVFPDSLTYV----EHELQRLGASEIVLRPARGKDGPIFTENGNFIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
D F I + L I GVIE GLFI I+
Sbjct: 196 DTRFNDID--SSLEERLKAITGVIESGLFIGYDIKVIVA 232
>gi|330444646|ref|YP_004377632.1| ribose 5-phosphate isomerase A [Chlamydophila pecorum E58]
gi|328807756|gb|AEB41929.1| ribose 5-phosphate isomerase A [Chlamydophila pecorum E58]
Length = 233
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 127/232 (54%), Gaps = 13/232 (5%)
Query: 1 MDALQ---MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSR 56
M+ K+N AR + V GM LG+G+GST++EF+ LA +I N + + SS+
Sbjct: 1 MEQDPYLFSKKNLARSVLSEVSSGMVLGLGSGSTSREFIRALAGEIQNRELSIHAVASSQ 60
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
++ K IPL + E S+DL +DG DEID +LR+IKG GGA+ REKI+ +A R I
Sbjct: 61 DSYVLAKSLGIPLENEETFLSLDLVVDGADEIDPQLRMIKGGGGAIFREKILLQSAKRRI 120
Query: 117 VIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
++ DESK+V LG+ +P+EI FG +SA++ G RL +G F++D
Sbjct: 121 ILVDESKQVPVLGKFGVPVEIAPFGRRSVISAME----SLGYRGAWRLTSSGE-FFLTDN 175
Query: 177 GNYIVDAFFGFI-PDPQIISGELCNIPGVIEHGLFINMVDC-AIIGTSDGEC 226
GNYI D + P P+ +L I G+I+ G I D G + G
Sbjct: 176 GNYIYDIRVPEMYPRPEEDLLKLLQIHGIIDVGFVIE--DIEVWFGDNHGRI 225
>gi|260174004|ref|ZP_05760416.1| putative ribose 5-phosphate isomerase [Bacteroides sp. D2]
gi|315922272|ref|ZP_07918512.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696147|gb|EFS32982.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 233
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K + AR DG +G G+GST + L+ +I ++VIP+S+ C
Sbjct: 21 EAKEHVAREIAATAKDGDVIGAGSGSTVYLTLFELSRRIREEHLHIEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D + DG DE+D + LIKG GGA+ +EK++ ++ + +I D SK
Sbjct: 81 QLGIPQTTLW-NQRPDWTFDGADEVDPQQNLIKGRGGAMFKEKLLIRSSRKTFIIIDPSK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEEL-RLRRNGSGLFVSDGGNYIV 181
RV + +P+E+ + + G +E + R R G ++ GN+I+
Sbjct: 140 RVNQLGSKFPIPVEVFPDSLTYV----EHELQRLGASEIVLRPARGKDGPIFTENGNFIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
D F I + L I GVIE GLFI I+
Sbjct: 196 DTRFNDID--SSLEERLKAITGVIESGLFIGYDIKVIVA 232
>gi|323331473|gb|EGA72888.1| Rki1p [Saccharomyces cerevisiae AWRI796]
Length = 207
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ IP+ + N + + L S E +D++ DG DE+D L+LIKG G L +EK+
Sbjct: 21 KFICIPTGFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKL 80
Query: 108 IAHAASRFIVIGDESKRVDF----LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELR 163
++ +A FIV+ D K+ R +PIEI + + L E E++
Sbjct: 81 VSTSAKTFIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDLLEQLHA----EKVD 136
Query: 164 LRRNG---SGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
+R+ G +G V+D N+I+DA FG I DP+ + E+ + GV+E GLFI+ A G
Sbjct: 137 IRQGGSAKAGPVVTDNNNFIIDADFGEISDPRKLHREIKLLVGVVETGLFIDNASKAYFG 196
Query: 221 TSDGECLVLQK 231
SDG V +K
Sbjct: 197 NSDGSVEVTEK 207
>gi|237720146|ref|ZP_04550627.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450698|gb|EEO56489.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 233
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K + AR DG +G G+GST + L+ +I ++VIP+S+ C
Sbjct: 21 EAKEHVAREIAATAKDGDVIGAGSGSTVYLTLFELSRRIREEHLHIEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D + DG DE+D + LIKG GGA+ +EK++ ++ + +I D SK
Sbjct: 81 QLGIPQTTLW-NQRPDWTFDGADEVDPQQNLIKGRGGAMFKEKLLIRSSRKTFIIIDPSK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEEL-RLRRNGSGLFVSDGGNYIV 181
RV + +P+E+ + + G +E + R R G ++ GN+I+
Sbjct: 140 RVNQLGSKFPIPVEVFPDSLTYV----EHELQRLGASEIVLRPARGKDGPIFTENGNFIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
D F +I + +L I GVIE GLFI I+
Sbjct: 196 DTRFNYID--SSLEEQLKAITGVIESGLFIGYDIKVIVA 232
>gi|332187108|ref|ZP_08388848.1| ribose 5-phosphate isomerase A [Sphingomonas sp. S17]
gi|332012808|gb|EGI54873.1| ribose 5-phosphate isomerase A [Sphingomonas sp. S17]
Length = 223
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
D KR AA A++ + D M +G+GTGSTA + LA++ R++ + +S +
Sbjct: 3 DRDADKRLAASAAVREICDDMLVGLGTGSTAAHAIAALAER---RLRIETVATSEASAAL 59
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + + VS VD++IDG D ID+ LR +KG GGA+LREK +A AA R IVI D
Sbjct: 60 ARSLGLTVRDFAQVSRVDVAIDGADAIDAGLRAVKGAGGAMLREKAVAEAADRMIVIADG 119
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SKRV+ L LPIEI F + L + R +D GN +V
Sbjct: 120 SKRVERLAPTKLPIEILPFARAFVIERLSRWFDHCIDRPDYR----------TDNGNIVV 169
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D P ++ L +PGV+ HGLF+ +D A I +G L++
Sbjct: 170 DGHGWDDTSPDTLAAALMAVPGVVGHGLFLTEIDAAYIA-DNGFVTRLER 218
>gi|327352258|gb|EGE81115.1| ribose 5-phosphate isomerase A [Ajellomyces dermatitidis ATCC
18188]
Length = 417
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/272 (22%), Positives = 104/272 (38%), Gaps = 42/272 (15%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA+ A+ Y + +G+G+G+T + + + +P+
Sbjct: 144 MSTIEDAKRNAAKEAVAKHYPPNPKFVGIGSGTTIVYVVEAIKALGVDTSSTGFVPTGYQ 203
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 204 SNQLVANAGLTPVAFDALPEGTVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 263
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGL 171
FI + D K L PIE+ V + S LK++ S L +
Sbjct: 264 FICVADSRKLQPRLLTNWPSIPIEVAPMAVGRVTSELKKLGSPLPKLRTAPVNAGEQTQP 323
Query: 172 FVSDGGNYIVDAFFGFIPDPQI------------------ISGELCNIPGVIEHGLFINM 213
+D +++DA F + P ++ + IPGV+E GLF +
Sbjct: 324 VKTDQDFFLIDAPFPKLLLPSDVVQGQDGSGKNGVWEVTVLAERIKLIPGVLEVGLFCGL 383
Query: 214 ---------------VDCAIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 384 TGPQAQATGGIGGQKPVAAYFGMPDGSVSVRK 415
>gi|160882728|ref|ZP_02063731.1| hypothetical protein BACOVA_00686 [Bacteroides ovatus ATCC 8483]
gi|299148023|ref|ZP_07041086.1| ribose 5-phosphate isomerase A [Bacteroides sp. 3_1_23]
gi|156111898|gb|EDO13643.1| hypothetical protein BACOVA_00686 [Bacteroides ovatus ATCC 8483]
gi|298514206|gb|EFI38092.1| ribose 5-phosphate isomerase A [Bacteroides sp. 3_1_23]
Length = 233
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTENFCK 63
+ K + AR DG +G G+GST + L+ +I ++VIP+S+ C
Sbjct: 21 EAKEHVAREIAATAKDGDVIGAGSGSTVYLTLFELSRRIREEYLHIEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + + + DG DE+D + LIKG GGA+ +EK++ ++ + +I D SK
Sbjct: 81 QLGIPQTTLW-NKRPNWTFDGADEVDPQQNLIKGRGGAMFKEKLLIRSSRKTFIIIDPSK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEEL-RLRRNGSGLFVSDGGNYIV 181
RV + +P+E+ + + G +E + R R G ++ GN+I+
Sbjct: 140 RVNQLGSKFPIPVEVFPDSLTYV----EHELQRLGASEIVLRPARGKDGPIFTENGNFIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
D F +I + +L I GVIE GLFI I+
Sbjct: 196 DTRFNYID--SSLEEQLKAITGVIESGLFIGYDIKVIVA 232
>gi|75765101|ref|ZP_00744388.1| Ribose 5-phosphate isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74487412|gb|EAO51341.1| Ribose 5-phosphate isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 200
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 36 MILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLI 95
+++L + + + E + +IPL S DV S+DL+IDG DEIDS L+LI
Sbjct: 14 ILILGEYYKKDYLSSC-TDIKGIEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLI 72
Query: 96 KGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASC 155
KG GGALLREKI+A ++ I+I DESK V LG LP+EI F +T + ++ +
Sbjct: 73 KGGGGALLREKIVASSSKELIIIADESKLVTHLGNFPLPVEIIPFSWKQTENKIQSLGC- 131
Query: 156 FGLNEELRLRRNGSGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMV 214
+ LR + +++D N I+D F I +P + +L I GV+E GLFI+M
Sbjct: 132 -----QTTLRLKNNETYITDNNNMIIDCIFSNHISNPAHLHTQLKMITGVVETGLFISMT 186
Query: 215 DCAIIGTSDGECLV 228
AII T +G +
Sbjct: 187 SKAIICTKNGIKEL 200
>gi|115388089|ref|XP_001211550.1| hypothetical protein ATEG_02372 [Aspergillus terreus NIH2624]
gi|114195634|gb|EAU37334.1| hypothetical protein ATEG_02372 [Aspergillus terreus NIH2624]
Length = 277
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 49/273 (17%)
Query: 4 LQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ KR A + A+ Y D +G+G+GST + + + + + + +P+ ++
Sbjct: 6 EEAKRAAGKAAVDNHYPKDAKFVGIGSGSTIVYVVKAIKESGIDTSKTKYVPTGFQSKQL 65
Query: 62 CKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + + + +D++ DG DE+D L LIKG G L +EKI+A A FIV+
Sbjct: 66 IVSNDLTAIDFDSLPEGTVLDVAFDGADEVDDELNLIKGGGACLFQEKIVALQAKEFIVV 125
Query: 119 GDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN------GSG 170
D K +PIE+ ++ LSALKE+ S N +R+ G
Sbjct: 126 ADSRKLQSRLLSNWKYIPIEVAPIAAHRVLSALKELGSI---NPVVRVPPGSSPELPKPG 182
Query: 171 LFVSDGGNYIVDAFF------------------GFIPDPQIISGELCNIPGVIEHGLFIN 212
+D G +I+DA F G + + +S + IPGV++ G+F
Sbjct: 183 PLKTDQGFFIIDAPFQTLLTQGDVAAGKDGSGKGGVWEVDALSRAIKQIPGVLDVGIFSG 242
Query: 213 ---------------MVDCAIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 243 VTGPQAQAAGGIGGQKPIAAYFGMPDGSVSVRK 275
>gi|320039135|gb|EFW21070.1| ribose 5-phosphate isomerase [Coccidioides posadasii str. Silveira]
Length = 317
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 49/274 (17%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M A++ KR AAR A+ Y + +G+G+G+T + + + +P+
Sbjct: 47 MSAIEDAKRAAAREAVANHYPQNPKFVGIGSGTTIVYVVEAIKALGIDTSSTSFVPTGFQ 106
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 107 SNQLIVNAGLTPIAFDALPEGAVLDIAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 166
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRR---NGS 169
FIV+ D K L PIE+ + ++AL+ + + E +LR+ +
Sbjct: 167 FIVVADYRKLQPRLLTAWPSIPIEVAPLASRRVITALQAL-----GSPEPKLRQSLISQE 221
Query: 170 GLFVSDGGNYIVDAFFGF------------------IPDPQIISGELCNIPGVIEHGLFI 211
G +D +++DA F I + + ++ E+ IPGV+E GLF
Sbjct: 222 GPVKTDQSFFLIDAPFPQLLTSSDIQSGKTASAKEGIWEVETLAKEIKQIPGVLEVGLFY 281
Query: 212 N---------------MVDCAIIGTSDGECLVLQ 230
A G +DG V +
Sbjct: 282 GPTGPQAQATGGVGGQKPIAAYFGMADGSVSVRK 315
>gi|224539729|ref|ZP_03680268.1| hypothetical protein BACCELL_04638 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518652|gb|EEF87757.1| hypothetical protein BACCELL_04638 [Bacteroides cellulosilyticus
DSM 14838]
Length = 233
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCK 63
+ K A+ DG +G G+GST + LA++I ++VIP+S C
Sbjct: 21 EGKEIVAQEIAAMAKDGDVIGAGSGSTVYLTLFALAERIRKESLHIEVIPASAEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D DG DE+D LIKG GGA+ +EK++ ++S+ +I D++K
Sbjct: 81 QLGIPQTTLW-NKRPDWVFDGADEVDPEKSLIKGRGGAMFKEKLLIKSSSKSFIIIDDTK 139
Query: 124 RVDFLGR-GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD LG +P+E+ + S ++ + + + +LRL G +++ GN+I D
Sbjct: 140 LVDHLGSHFPIPVEVFPGALTFVESEMQRLGAS---DVKLRLAGGKDGPVLTENGNFIFD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
F ++ DP + L I GVIE GLFI ++
Sbjct: 197 TRFSYV-DPS-LEQNLKAITGVIESGLFIGYDVEIVVAK 233
>gi|309775859|ref|ZP_07670853.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
3_1_53]
gi|308916397|gb|EFP62143.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
3_1_53]
Length = 203
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
DGM LG+GTGST + + L + + +++I SS++++ + H + + P+ V +
Sbjct: 2 KDGMVLGLGTGSTVRWLIEELGTR-KDLTHLKIISSSKDSQQRAQQHGLHIIEPKLVDHI 60
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
DL IDG D+ID + ++IKG GGAL+REKI+A AA I I D SKRV + LP+EI
Sbjct: 61 DLVIDGVDQIDEQKQVIKGGGGALVREKILAEAAEHIIWIMDASKRVSTIEAYPLPVEIV 120
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGEL 198
F + + LK ++ R+ + SD N+I+D EL
Sbjct: 121 PFSLPFVIRRLKAKGY------TVKQRQQDGQAYCSDNRNFILDVLLPKNRLLCEAHEEL 174
Query: 199 CNIPGVIEHGLFINMVDCAIIGTS 222
+I GV+E G F M + ++
Sbjct: 175 RHIAGVVETGYFC-MDAVCVTASA 197
>gi|20095101|ref|NP_614948.1| ribose 5-phosphate isomerase [Methanopyrus kandleri AV19]
gi|19888389|gb|AAM02878.1| Ribose 5-phosphate isomerase [Methanopyrus kandleri AV19]
Length = 212
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 13/219 (5%)
Query: 7 KRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
KRNAAR+A + V +G+G G+T + F+ L + A+ IP + + +
Sbjct: 4 KRNAARKAAEEVCRRGYEVIGVGAGTTVEAFLEELVKREADVLVFTTIPGTIDACRRIGL 63
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ + + ++IDG D +D L+KG G EK I + A F V+ DESK
Sbjct: 64 NVTTIPP----EELPVAIDGADAVDPDGNLLKGGGACHSLEKAIDYTADEFWVVVDESKL 119
Query: 125 VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
V+ L +P+E+ + T+ L+E R G VSD GN IVD
Sbjct: 120 VENLWELPVPVEVLRGCYELTVRTLEEF-----GEVRPRTCDEKYGPVVSDSGNPIVDLH 174
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTS 222
DP + EL ++PGV+E G+F + VD I+G S
Sbjct: 175 VDD-WDPAELERELNSVPGVVECGVFPGDKVDRIIVGRS 212
>gi|295084895|emb|CBK66418.1| ribose-5-phosphate isomerase [Bacteroides xylanisolvens XB1A]
Length = 233
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 10/219 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K + AR DG +G G+GST + LA +I ++VIP+S+ C
Sbjct: 21 EAKEHVAREIAATAKDGDVIGAGSGSTVYLTLFELARRIREEHLHIEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D + DG DE+D + LIKG GGA+ +EK++ ++ + +I D SK
Sbjct: 81 QLGIPQTTLW-NKRPDWTFDGADEVDPQQNLIKGRGGAMFKEKLLIRSSRKTFIIIDPSK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEEL-RLRRNGSGLFVSDGGNYIV 181
RV + +P+E+ + + G +E + R G ++ GN+I+
Sbjct: 140 RVNQLGNKFSIPVEVFPDSLTYV----EHELQRLGASEIVLRPAHGKDGPVFTENGNFIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
D F +I + +L I GVIE GLFI I+
Sbjct: 196 DTRFNYID--SSLEEQLKTITGVIESGLFIGYDVEVIMA 232
>gi|226293490|gb|EEH48910.1| ribose 5-phosphate isomerase A [Paracoccidioides brasiliensis Pb18]
Length = 274
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 42/271 (15%)
Query: 1 MDALQ-MKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA+ A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNAAKEAVDKHYPPNAKFVGIGSGTTIVYVVEAIKALGVDTSTTGFVPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVVNAGLTPVAFDALPDGAVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGL 171
FI + D K L PIE+ V + ++ L+++ S L +
Sbjct: 121 FICVADSRKLQSRLLTNWPSIPIEVAPIAVRRVIAELQKIGSPLPKLRITAPEVGEHATP 180
Query: 172 FVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGLFINM 213
+D G +++DA F + P ++ + IPGV+E GLF +
Sbjct: 181 VKTDQGFFLIDAPFPKLLLPSDVAQGQDGSGKNGVWEVTALAERINMIPGVLEVGLFCGL 240
Query: 214 VD---------------CAIIGTSDGECLVL 229
A G DG V
Sbjct: 241 TARQAQAVGGIGGQKPVAAYFGMPDGSVSVR 271
>gi|332829624|gb|EGK02270.1| ribose 5-phosphate isomerase A [Dysgonomonas gadei ATCC BAA-286]
Length = 232
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCK 63
+ K A+ + DG +G+G+GST +I + ++I +QVIPSS C
Sbjct: 21 EGKEKVAKEIAAKMKDGQIIGVGSGSTVYLALIAITERIEKENLHIQVIPSSLEILMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D D + DG DE+D + LIKG GGA+ +EK++ ++ +I DESK
Sbjct: 81 QLRIPQTTLLD-KKPDWTFDGADEVDPQRSLIKGRGGAMFKEKLLIRNSTETYIIVDESK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V + +P+E+ L A KE+ + + LR+ + G +++ GN+I+D
Sbjct: 140 FVAQLGSKFPVPVEVFP---TSLLYAEKELIALGARDVSLRMAKGKDGPVITENGNFILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
A+F I + ++ +I GVIE GLFI
Sbjct: 197 AWFDSIKN--SFERDIKSITGVIESGLFIG 224
>gi|62988813|gb|AAY24200.1| unknown [Homo sapiens]
Length = 177
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + L + +DL+IDG DE+D+ L LIKG GG L +EKI+A ASRFIV
Sbjct: 1 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 60
Query: 118 IGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVS 174
I D K +PIE+ A+ + FG ELR+ N +G V+
Sbjct: 61 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQ---KFGGVVELRMAVNKAGPVVT 117
Query: 175 DGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GN+I+D F + ++ + IPGV++ GLFINM + G DG + +K
Sbjct: 118 DNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREK 174
>gi|295664917|ref|XP_002793010.1| ribose 5-phosphate isomerase A [Paracoccidioides brasiliensis Pb01]
gi|226278531|gb|EEH34097.1| ribose 5-phosphate isomerase A [Paracoccidioides brasiliensis Pb01]
Length = 274
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 42/271 (15%)
Query: 1 MDALQ-MKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA+ A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNAAKEAVDKHYPPNAKFVGIGSGTTIVYVVEAIKALGVDTSTTGFVPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVVNAGLTPVAFDALPEGAVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGL 171
FI + D K L PIE+ V + ++ L+++ S L +
Sbjct: 121 FICVADSRKLQSRLLTNWPSIPIEVAPIAVRRVITELQKIGSPLPKLRITAPEVGEHATP 180
Query: 172 FVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGLFINM 213
+D G +++DA F + P ++ + IPGV+E GLF +
Sbjct: 181 VKTDQGFFLIDAPFPKLLLPSDVAQGQDGSGKNGVWEVTALADRINMIPGVLEVGLFCGL 240
Query: 214 ---------------VDCAIIGTSDGECLVL 229
A G DG V
Sbjct: 241 TGPQAQAVGGIGGQKPVAAYFGMPDGSVSVR 271
>gi|29347396|ref|NP_810899.1| putative ribose 5-phosphate isomerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570559|ref|ZP_04847967.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298385146|ref|ZP_06994705.1| ribose 5-phosphate isomerase A [Bacteroides sp. 1_1_14]
gi|29339296|gb|AAO77093.1| putative ribose 5-phosphate isomerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251839508|gb|EES67591.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298262290|gb|EFI05155.1| ribose 5-phosphate isomerase A [Bacteroides sp. 1_1_14]
Length = 233
Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 8/217 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCK 63
+ K AR G +G G+GST + LA +I ++VIP+S+ C
Sbjct: 21 EAKERVAREIAATAKTGDVIGAGSGSTVYLTLFELAKRIHEEHLYLEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP + D D + DG DE+D LIKG GGA+ +EK++ ++ + +I D SK
Sbjct: 81 QLGIPQTTLWD-KRPDWTFDGADEVDPDRNLIKGRGGAMFKEKLLIRSSGKTFIIVDPSK 139
Query: 124 RVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V+ + +P+E+ ++ L+ + + LR G +++ GN+I+D
Sbjct: 140 LVNILGSKFPIPVEVFPHALSYVEKELRRLGASEI---SLRPAHGKDGPILTENGNFILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAII 219
F +I + +L I GVIE GLFIN ++
Sbjct: 197 TRFHYID--ASLEEQLKTITGVIESGLFINYDIEVVV 231
>gi|225684095|gb|EEH22379.1| ribose-5-phosphate isomerase [Paracoccidioides brasiliensis Pb03]
Length = 274
Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 42/271 (15%)
Query: 1 MDALQ-MKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA+ A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNAAKEAVDKHYPPNAKFVGIGSGTTIVYVVEAIKALGVDTSTTGFVPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVVNAGLTPVAFDALPDGAVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGL 171
FI + D K L PIE+ V + ++ L+++ S L +
Sbjct: 121 FICVADSRKLQSRLLTNWPSIPIEVAPIAVRRVIAELQKIGSPLPKLRITAPEVGEHAAP 180
Query: 172 FVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGLFINM 213
+D G +++DA F + P ++ + IPGV+E GLF +
Sbjct: 181 VKTDQGFFLIDAPFPKLLLPSDVAQGQDGSGKNGVWEVTALAERINMIPGVLEVGLFCGL 240
Query: 214 ---------------VDCAIIGTSDGECLVL 229
A G DG V
Sbjct: 241 TGPQAQAVGGIGGQKPVAAYFGMPDGSVSVR 271
>gi|255965830|gb|ACU45205.1| ribose-5-phosphate isomerase [Prorocentrum minimum]
Length = 202
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
IP+S T+ + IPL + ++ S +D++IDG DE+D L L+KG GGAL REKI+
Sbjct: 1 VAIPTSIRTKEQAESLGIPLATLDEYSDLDVAIDGADEVDPGLNLVKGGGGALFREKIVE 60
Query: 110 HAASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR--- 165
A +FIVI DESK D +P+EI F T+ + ++ + G LRL
Sbjct: 61 MCAKKFIVIVDESKMCDGLGPGFPVPVEIVPFCHEHTMRVIAQLPALKGCKPVLRLGDCS 120
Query: 166 ---RNGSGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
+G V+D GNYIVD F I DP +L GV++HGLF M II
Sbjct: 121 NNKPDGEDPAVTDNGNYIVDLEFTDPIKDPVAAGQQLMRTVGVVDHGLFTGMTTAVIIAG 180
Query: 222 SDG 224
+DG
Sbjct: 181 ADG 183
>gi|116196946|ref|XP_001224285.1| hypothetical protein CHGG_05071 [Chaetomium globosum CBS 148.51]
gi|88180984|gb|EAQ88452.1| hypothetical protein CHGG_05071 [Chaetomium globosum CBS 148.51]
Length = 275
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 39/262 (14%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
KR AA +A++ + + +G+G+GST + +A A ++ P+ +E
Sbjct: 12 VETSKRLAAYQAVKDHLLPEYTRIGIGSGSTVVYVVEAIAALGPAATSKMAFYPTGSQSE 71
Query: 60 NFCKIHHIPLHSPEDVS---SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ + L + +D++ DG DE+D + LIKG G L +EKI+A +A +F+
Sbjct: 72 ELIEAAGLTLQYISKLPAGQQLDVAFDGADEVDDDMNLIKGGGACLWQEKIVAASAKQFV 131
Query: 117 VIGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLF 172
+ D K + +PIE+ + L L+ + S N +R +G
Sbjct: 132 CVADFRKLSPRLGTAWKKGIPIEVLPMAAPRVLDELQRMGSQ---NPRIRPGLPGKAGAI 188
Query: 173 VSDGGNYIVDAFFGFIPDPQ---------------IISGELCNIPGVIEHGLFIN----- 212
V+D G +I+DA F + P+ ++ L IPGV E GLF
Sbjct: 189 VTDNGLWIIDAPFAPLLLPKDTETDRGTDGAWTVDALADGLIKIPGVAEIGLFYGKNGLQ 248
Query: 213 ------MVDCAIIGTSDGECLV 228
A G +DG V
Sbjct: 249 VASGAQKPVAAYFGMADGSVEV 270
>gi|312886782|ref|ZP_07746389.1| ribose-5-phosphate isomerase [Mucilaginibacter paludis DSM 18603]
gi|311300884|gb|EFQ77946.1| ribose-5-phosphate isomerase [Mucilaginibacter paludis DSM 18603]
Length = 235
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
K+ A + + V DG TLG+G+GST +I +A++I V+ IP+S FC
Sbjct: 23 KQKVAAQIAEKVTDGDTLGIGSGSTVYLALIAIAERIKTEKLNVKGIPTSIEISMFCAKL 82
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
IPL + + D DG DE+D+ LIKG GGA +EK++ + + +I DESK V
Sbjct: 83 GIPLTTLFEN-KPDWLFDGADEVDTNKSLIKGRGGAAFKEKLLISSCPKNYIIVDESKLV 141
Query: 126 D-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+PIE+ + LK++ + + +R + G +S+ N I+D
Sbjct: 142 TRLGTNFPIPIEVFPQALLYVEQQLKKLGANSIV---VRPAKGKDGPIISENDNLILDCR 198
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
F + + ++ I GVIE GLFI ++ ++
Sbjct: 199 FDEVG--SSLEKDIKAITGVIESGLFIGYPLEILVAGNN 235
>gi|225557296|gb|EEH05582.1| ribose 5-phosphate isomerase A [Ajellomyces capsulatus G186AR]
Length = 274
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 48/275 (17%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA++A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNAAKQAVAKHYPPNPKFVGIGSGTTIVYVVEAIKALGVDTTTTGFVPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + S + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVVNAGLTSISLDALPEGAVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-- 170
FI + D K L PIE+ V + +S L+++ S +LR G
Sbjct: 121 FICVADSRKLQRRLLTNWPSIPIEVAPLAVRRVISELQKLGSPL---PKLRNAPIKEGEH 177
Query: 171 --LFVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGLF 210
+D ++VDA F + P ++ + IPGV+E GLF
Sbjct: 178 TQPLKTDQDFFLVDAPFPKLLLPSDVAQGEDGSGKNGVWEVTALAERIKLIPGVLEVGLF 237
Query: 211 INM---------------VDCAIIGTSDGECLVLQ 230
+ A G DG V +
Sbjct: 238 CGLTGPQAQAAGGIGGQKPTAAYFGMPDGSVSVRK 272
>gi|118575245|ref|YP_874988.1| ribose 5-phosphate isomerase [Cenarchaeum symbiosum A]
gi|118193766|gb|ABK76684.1| ribose 5-phosphate isomerase [Cenarchaeum symbiosum A]
Length = 225
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIHH 66
R + A+ V DG +G+G+G A + LA + + +P+S +
Sbjct: 9 RAISADALNMVKDGQVIGLGSGRAAAVLVRELASRARSERMNITGVPTSLQIRLVAEECG 68
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
I L P D +D+ DG D++D + LIKG GGALL E I+ A + ++I DESK +
Sbjct: 69 ISLRDPGDTDKIDIVFDGADQVDRQGNLIKGGGGALLTESILIGMADKVVIIADESKFAE 128
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG 186
L +P+E+ + E G LRL + ++ N ++D FG
Sbjct: 129 HLDA-PVPVEVHPAA----RRSAAESVMRLGGKPVLRL-LDRGFPLFTENRNLVLDCSFG 182
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I DP + +L +IPGV E G+ D +DG
Sbjct: 183 TITDPSTLRDKLTDIPGVAEAGIITRRPDTTYRAKTDG 220
>gi|171688142|ref|XP_001909011.1| hypothetical protein [Podospora anserina S mat+]
gi|170944033|emb|CAP70143.1| unnamed protein product [Podospora anserina S mat+]
Length = 348
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 40/264 (15%)
Query: 4 LQMKRNAARRAI--QYVV--DGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSSRN 57
Q KR AA +++ V +G+G+GST + + + A + P+
Sbjct: 87 EQSKRLAAFQSVTAHLVPFPSRTRIGIGSGSTVIYVVEAITTLVPPATLSTMTFYPTGAQ 146
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+E + + L + +D+ DG DE+D L LIKG G L +EKI+A ++ +
Sbjct: 147 SEQLIESAGLNLQYINKLPPGTLLDVCFDGADEVDPNLNLIKGGGACLWQEKIVASSSKK 206
Query: 115 FIVIGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSG 170
F+ + D K + + +PIE+ N+ L L+ + S L ++R +G
Sbjct: 207 FVCVADFRKMSPALGTMWKKGIPIEVLPLAANRVLGELERMGS---LGPKVRPGLPGKAG 263
Query: 171 LFVSDGGNYIVDAFFGFI------------PDPQIISGELCNIPGVIEHGLFIN------ 212
V+D G +IVDA F + ++ L IPGV E GLF
Sbjct: 264 AVVTDNGMWIVDAPFRPLRVEGTSDKEKGEWQIDELADALIKIPGVAEIGLFYGKNGNQA 323
Query: 213 ------MVDCAIIGTSDGECLVLQ 230
A G DG VL
Sbjct: 324 GEGGAQKPVEAYFGMEDGSVKVLS 347
>gi|303318371|ref|XP_003069185.1| ribose 5-phosphate isomerase A family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108871|gb|EER27040.1| ribose 5-phosphate isomerase A family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 271
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 49/274 (17%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M A++ KR AAR A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSAIEDAKRAAAREAVANHYPQNPKFVGIGSGTTIVYVVEAIKALGIDTSSTSFVPTGFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLIVNAGLTPIAFDALPEGAVLDIAFDGADEVDDDLNCIKGGGACLFQEKVVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRR---NGS 169
FIV+ D K L PIE+ + ++AL+ + + E +LR+ +
Sbjct: 121 FIVVADYRKLQPRLLTAWPSIPIEVAPLASRRVITALQAL-----GSPEPKLRQSLISQE 175
Query: 170 GLFVSDGGNYIVDAFFGF------------------IPDPQIISGELCNIPGVIEHGLFI 211
G +D +++DA F I + + ++ E+ IPGV+E GLF
Sbjct: 176 GPVKTDQSFFLIDAPFPQLLTSSDIQSGKTASAKEGIWEVETLAKEIKQIPGVLEVGLFY 235
Query: 212 N---------------MVDCAIIGTSDGECLVLQ 230
A G +DG V +
Sbjct: 236 GPTGPQAQATGGVGGQKPIAAYFGMADGSVSVRK 269
>gi|169772631|ref|XP_001820784.1| ribose 5-phosphate isomerase A [Aspergillus oryzae RIB40]
gi|238490546|ref|XP_002376510.1| ribose 5-phosphate isomerase A [Aspergillus flavus NRRL3357]
gi|83768645|dbj|BAE58782.1| unnamed protein product [Aspergillus oryzae]
gi|220696923|gb|EED53264.1| ribose 5-phosphate isomerase A [Aspergillus flavus NRRL3357]
Length = 278
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 103/270 (38%), Gaps = 43/270 (15%)
Query: 4 LQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
KR A + A++ Y D +G+G+GST + + + + + + +P+ ++
Sbjct: 6 ESAKRAAGQAAVKNHYPKDAKYVGIGSGSTIVYVVEAIKESGVDTSQTKYVPTGYLSKQL 65
Query: 62 CKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + + + +D++ DG DE+D L LIKG G L +EKI+A A F+ +
Sbjct: 66 IVSNGLTAVDFDSLPEGTVLDIAFDGADEVDDDLNLIKGGGACLFQEKIVALQAKEFVCV 125
Query: 119 GDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVA---SCFGLNEELRLRRNGSGLFV 173
D K +PIE+ ++ L L+E+ LN
Sbjct: 126 ADSRKLQSRLLSNWKYIPIEVAPIAASRVLGELRELGSISPALRLNTTAPEGAPKPTPLK 185
Query: 174 SDGGNYIVDAFFGF------------------IPDPQIISGELCNIPGVIEHGLFIN--- 212
+D I+DA F + + + +S + IPGV++ G+F
Sbjct: 186 TDQAFNIIDAPFKSLLTKADIAAGQDGTGKDGVWEVEALSRAIKQIPGVLDVGIFSGETG 245
Query: 213 ------------MVDCAIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 246 PQAQARGGTGGQKPIAAYFGMPDGSVSVRK 275
>gi|311086145|gb|ADP66227.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086719|gb|ADP66800.1| ribose-5-phosphate isomerase A [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 179
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ SS ++ K H I + ++ SS+ + +D DEI++ +++IKG GGAL REKIIA
Sbjct: 4 GAVSSSNSSTVLLKKHGIEVFDLKNFSSLAIYVDSADEINNHMQMIKGGGGALTREKIIA 63
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS 169
+ +F+ I D+SK+VD LG LPIEI ++ + + G + R
Sbjct: 64 SMSKKFVCIIDKSKKVDVLGTFPLPIEIIPMALSYIFREMIK----IGGTPKYRKN---- 115
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
++D GN I+D + I DP + ++ ++PGV+ GLF + D +IGT G +
Sbjct: 116 --VITDNGNIIIDVYNLCIKDPISMEKKINSLPGVVTVGLFASRSADIVLIGTQKGIRTI 173
Query: 229 LQK 231
+K
Sbjct: 174 NKK 176
>gi|261190606|ref|XP_002621712.1| ribose 5-phosphate isomerase A [Ajellomyces dermatitidis SLH14081]
gi|239591135|gb|EEQ73716.1| ribose 5-phosphate isomerase A [Ajellomyces dermatitidis SLH14081]
gi|239614822|gb|EEQ91809.1| ribose 5-phosphate isomerase A [Ajellomyces dermatitidis ER-3]
Length = 274
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 103/272 (37%), Gaps = 42/272 (15%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA+ A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNAAKEAVAKHYPPNPKFVGIGSGTTIVYVVEAIKALGVDTSSTGFVPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVANAGLTPVAFDALPEGTVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSGL 171
FI + D K L PIE+ V + S LK++ S L +
Sbjct: 121 FICVADSRKLQPRLLTNWPSIPIEVAPMAVGRVTSELKKLGSPLPKLRTAPVNAGEQTQP 180
Query: 172 FVSDGGNYIVDAFFGF------------------IPDPQIISGELCNIPGVIEHGLFINM 213
+D +++DA F + + ++ + IPGV+E GLF +
Sbjct: 181 VKTDQDFFLIDAPFPKLLLSSDVVQGQDGSGKNGVWEVTALAERIKLIPGVLEVGLFCGL 240
Query: 214 ---------------VDCAIIGTSDGECLVLQ 230
G DG V +
Sbjct: 241 TGPQAQATGGIGGQKPVAVYFGMPDGSVSVRK 272
>gi|237714006|ref|ZP_04544487.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407058|ref|ZP_06083607.1| ribose 5-phosphate isomerase A [Bacteroides sp. 2_1_22]
gi|294644865|ref|ZP_06722605.1| ribose 5-phosphate isomerase A [Bacteroides ovatus SD CC 2a]
gi|294809792|ref|ZP_06768476.1| ribose 5-phosphate isomerase A [Bacteroides xylanisolvens SD CC 1b]
gi|229445830|gb|EEO51621.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355761|gb|EEZ04852.1| ribose 5-phosphate isomerase A [Bacteroides sp. 2_1_22]
gi|292639803|gb|EFF58081.1| ribose 5-phosphate isomerase A [Bacteroides ovatus SD CC 2a]
gi|294443032|gb|EFG11815.1| ribose 5-phosphate isomerase A [Bacteroides xylanisolvens SD CC 1b]
Length = 233
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K + AR DG +G G+GST + LA +I ++VIP+S+ C
Sbjct: 21 EAKEHVAREIAATAKDGDVIGAGSGSTVYLTLFELARRIREEHLHIEVIPASQEISMTCI 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP D + DG DE+D + LIKG GGA+ +EK++ ++ + +I SK
Sbjct: 81 QLGIPQTILW-NKRPDWTFDGADEVDPQRNLIKGRGGAMFKEKLLIRSSRKTFIIIGPSK 139
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEEL-RLRRNGSGLFVSDGGNYIV 181
RV+ + +P+E+ + G +E + R G ++ GN+I+
Sbjct: 140 RVNLLGNKFPIPVEVFPDSLTYV----DHELQRLGASEIVLRPAHGKDGPVFTENGNFIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
D F +I + +L I GVIE GLFI I+
Sbjct: 196 DTRFNYID--SSLEEQLKTITGVIESGLFIGYDVEVIMA 232
>gi|218263817|ref|ZP_03477793.1| hypothetical protein PRABACTJOHN_03483 [Parabacteroides johnsonii
DSM 18315]
gi|218222490|gb|EEC95140.1| hypothetical protein PRABACTJOHN_03483 [Parabacteroides johnsonii
DSM 18315]
Length = 231
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 9/217 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K A V +G +G+G+GSTA ++ +A ++ ++ IP+S+ C
Sbjct: 21 EEKERVADIISSMVKEGEIIGVGSGSTAYLALLKIARRMKNEQLHIRAIPTSQEIRMACV 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ S + D + DG DEID+ +IKG GGA+ +EK++ +++ R +I D SK
Sbjct: 81 RLGIPVTSLWEH-KPDWTFDGADEIDTEHNMIKGRGGAMFKEKLLINSSPRTYIIADPSK 139
Query: 124 RV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
V R +PIEI + L+ +LR+ + G +++ GN I+D
Sbjct: 140 IVTQLGSRFPVPIEIFPEALTYVEEVLRAYNPKEI---KLRMAKGKDGPVITENGNLILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAII 219
+F I P + + +I GVIE GLFI+ D II
Sbjct: 197 TWFDHI--PNNLEESIKSITGVIESGLFIHY-DVHII 230
>gi|119175718|ref|XP_001240041.1| hypothetical protein CIMG_09662 [Coccidioides immitis RS]
Length = 271
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 49/274 (17%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M A++ KR AAR A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSAIEDAKRAAAREAVANHYPQNPKFVGIGSGTTIVYVVEAIKALGIDTSSTSFVPTGFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLIVNAGLTPIAFDALPEGAVLDIAFDGSDEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRR---NGS 169
FIV+ D K L PIE+ + ++AL+ + + E +LR+ +
Sbjct: 121 FIVVADYRKLQPRLLTAWPSIPIEVAPLASRRVITALQAL-----GSPEPKLRQSLISQE 175
Query: 170 GLFVSDGGNYIVDAFFGF------------------IPDPQIISGELCNIPGVIEHGLFI 211
G +D +++DA F I + + ++ E+ IPGV+E GLF
Sbjct: 176 GPVKTDQSFFLIDAPFPQLLTSSDIQSGKTASAKEGIWEVETLAKEIKQIPGVLEVGLFY 235
Query: 212 N---------------MVDCAIIGTSDGECLVLQ 230
A G +DG V +
Sbjct: 236 GPTGPQAQATGGVGGQKPIAAYFGMADGSVSVRK 269
>gi|254573016|ref|XP_002493617.1| Ribose-5-phosphate ketol-isomerase [Pichia pastoris GS115]
gi|238033416|emb|CAY71438.1| Ribose-5-phosphate ketol-isomerase [Pichia pastoris GS115]
Length = 217
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 45/238 (18%)
Query: 4 LQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ K+ AA A+ +G+G+GST L
Sbjct: 7 EKSKKLAAFAAVNENVSKSDRIIGVGSGSTVVYVAERLGQLENKEKF------------- 53
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ ++ DG DEID+ L LIKG G AL +EK++A + +F+V+ D
Sbjct: 54 ----------------IYVAFDGADEIDTNLNLIKGGGAALYQEKLVASLSRKFVVVADF 97
Query: 122 SKRVD----FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR---RNGSGLFVS 174
K+ R +PIE+ K L + G N LR + +G V+
Sbjct: 98 RKQSPERLGHFWRKGVPIEVVPNSYVKVL----KDLFKLGAN-SATLRDAGKAKAGPVVT 152
Query: 175 DGGNYIVDAFFGFIP--DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D GN+++DA FG IP + + +L + GV+E G F++ + A IG DG L
Sbjct: 153 DNGNFVIDADFGEIPLNKVKELDEKLIRLVGVVETGFFVDYAEKAYIGNEDGSITSLS 210
>gi|320100919|ref|YP_004176511.1| ribose-5-phosphate isomerase [Desulfurococcus mucosus DSM 2162]
gi|319753271|gb|ADV65029.1| ribose-5-phosphate isomerase [Desulfurococcus mucosus DSM 2162]
Length = 240
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 1 MD----ALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQ-V 51
MD K NA R A + + D +G+GTGST + LL D + F + +
Sbjct: 1 MDSSSSVEHAKLNACREACRILRETYRDASVIGVGTGST----IKLLIDHCRDFFTGKRL 56
Query: 52 IPSSRNTE-NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+PSS +T + I + L P V VD+ IDG DE+ S+L ++KG GGA REK +A
Sbjct: 57 VPSSADTMLHLASIGYTVLLDPAGVDEVDVYIDGADEVSSKLDMVKGRGGAFAREKTLAL 116
Query: 111 AASRFIVIGDESKR--VDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG 168
+ I + D +K VD+L +P+E+ + + L E+ LR+
Sbjct: 117 RSRERIYVVDYTKYTGVDYLYAKPIPVEVLPVSLRYVVRKLGELGY---GEPVLRVGSGK 173
Query: 169 SGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGEC 226
G VSD GNYIVD + DP + L + GVIE G+F + +VD I+G G
Sbjct: 174 DGPVVSDNGNYIVDYKLSKPVRDPLALHNALKLLHGVIETGVFPSELVDMVIVGEPSG-V 232
Query: 227 LVLQK 231
VL+K
Sbjct: 233 KVLKK 237
>gi|296419186|ref|XP_002839200.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635206|emb|CAZ83391.1| unnamed protein product [Tuber melanosporum]
Length = 348
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 24 LGMGTGSTAKEFMILLADK-IANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS-SVDLS 81
+G+G+GST + + + +P+ + + + + EDV + ++
Sbjct: 130 VGIGSGSTVFYVVDRIRQLSVGRTSNTGFVPTGHQSRELLRNAGLRMVRLEDVPGMISVA 189
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD---FLGRGMLPIEID 138
DG DE+D L +KG GG LL EK++A + FIV+ D++K R +P+E+
Sbjct: 190 FDGADEVDGWLNCVKGGGGCLLLEKLVAIRSKVFIVVADQTKLSHALLTSYRHGIPLEVF 249
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFVSDGGNYIVDAFFGFIPDP---QII 194
V LS L+ + S + +R G V+D GN+IVDA F + +
Sbjct: 250 PSAVPYVLSELRSLGST---DPRVRDGAPAKLGPCVTDNGNFIVDAPFPPLATSGAVVEL 306
Query: 195 SGELCNIPGVIEHGLFI---NMVDCAIIGTSDGECL 227
+ L I GV+EHG+F + A G + G
Sbjct: 307 AESLKGIVGVVEHGIFWRGDRRPEKAFFGGAGGVVR 342
>gi|255018224|ref|ZP_05290350.1| ribose-5-phosphate isomerase A [Listeria monocytogenes FSL F2-515]
Length = 174
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 103/179 (57%), Gaps = 5/179 (2%)
Query: 53 PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
+S T + IPL S DV+ +D++IDG DEID+ + IKG GGALLREK++A A+
Sbjct: 1 ATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASAS 60
Query: 113 SRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLF 172
+ I + E K V LG+ LP+E+ FG + L++ L +++ ++
Sbjct: 61 LKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLR-----KQSSGEVY 115
Query: 173 VSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
V++ GNYI+D D ++ +L IPG++EHGLF++ VD I ++GE +++K
Sbjct: 116 VTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK 174
>gi|258652397|ref|YP_003201553.1| ribose 5-phosphate isomerase [Nakamurella multipartita DSM 44233]
gi|258555622|gb|ACV78564.1| ribose 5-phosphate isomerase [Nakamurella multipartita DSM 44233]
Length = 213
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 21/231 (9%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M + KR AA ++ V +GMT+G+GTGST + LA + G ++ + +S T
Sbjct: 1 MSSEDEKRTAAVASVGLVENGMTVGLGTGSTVAYLLPALAAR---GLDIRCVATSPRTAT 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + +V D++IDG D+I LIKG G A REK++A+AA RF+VI D
Sbjct: 58 AAGELGLRIVDFSEVDRFDIAIDGADQIAPDGWLIKGGGAAHTREKVVANAADRFVVIAD 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
SK VD L G +P+E+ +G++ TL L + LR DGG +
Sbjct: 118 ASKPVDALH-GSVPVELLAYGLSATLRELAH----------VVLR---DVPRSPDGG--V 161
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIG-TSDGECLVL 229
+ + G + DP ++ L PG+++HGLF +MV+ +I SD E VL
Sbjct: 162 IGDYHGDLSDPAALAARLSAAPGLVDHGLFPPSMVNDVLIARGSDVEHRVL 212
>gi|187918513|ref|YP_001884076.1| ribose 5-phosphate isomerase [Borrelia hermsii DAH]
gi|238689296|sp|B2S100|RPIA_BORHD RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|119861361|gb|AAX17156.1| ribose 5-phosphate isomerase [Borrelia hermsii DAH]
Length = 228
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 13/233 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
+ K+ ++ AI Y+ M LG+GTG+T + L+DKI +G +++ P+S +T+
Sbjct: 2 EEQKKLVSQYAIDHYIKSNMHLGIGTGTTVFYAIKYLSDKIKSGDLKNLKLYPTSSDTKY 61
Query: 61 FCKIHHIPLHS--PEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
+I S + ++D++IDG DEI + LIKG G A L EKIIA+ + + ++
Sbjct: 62 LLAKENITYESKFTKFSKNIDITIDGADEILLEKKALIKGGGAAHLMEKIIAYNSHQLLI 121
Query: 118 IGDESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIEI + + N LR + +G ++D
Sbjct: 122 IADETKIVQTLGEKVSVPIEIVPDALPFITA----NLEKMNFNPVLRTCKFKAGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
NYI+D I +P+ +PG++E G+F + I +G+ +
Sbjct: 178 NNYILDVK-MNIENPKGAEKYFKLLPGILEIGIFNHQNTKVI-YYQNGQIKEI 228
>gi|325096702|gb|EGC50012.1| ribose 5-phosphate isomerase A [Ajellomyces capsulatus H88]
Length = 274
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 48/275 (17%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA++A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNAAKQAVAKHYPPNPKFVGIGSGTTIVYVVEAIKALGVDTTTTGFVPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + S + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVANAGLTSISLDALPEGAVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-- 170
FI + D K L PIE+ V + +S L+++ S +LR G
Sbjct: 121 FICVADSRKLQRRLLTNWPSIPIEVAPLAVRRVISELQKLGSPL---PKLRNAPIKEGEH 177
Query: 171 --LFVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGLF 210
+D ++VDA F + P ++ + IPGV+E GLF
Sbjct: 178 TQPVKTDQDFFLVDAPFPKLLLPSDVAQGEDGSGKNGVWEVTALAERIKLIPGVLEVGLF 237
Query: 211 INM---------------VDCAIIGTSDGECLVLQ 230
+ A G DG V +
Sbjct: 238 CGLTGPQAQAAGGIGGQKPTAAYFGMLDGSVSVRK 272
>gi|240280202|gb|EER43706.1| ribose 5-phosphate isomerase A [Ajellomyces capsulatus H143]
Length = 274
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 48/275 (17%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNAA++A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNAAKQAVAKHYPPNPKFVGIGSGTTIVYVVEAIKALGVDTTTTGFVPTGHQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + S + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVANAGLTSISLDALPEGAVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-- 170
FI + D K L PIE+ V + +S L+++ S +LR G
Sbjct: 121 FICVADSRKLQRRLLTNWPSIPIEVAPLAVRRVISELQKLGSPL---PKLRNAPIKEGEH 177
Query: 171 --LFVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGLF 210
+D ++VDA F + P ++ + IPGV+E GLF
Sbjct: 178 TQPVKTDQDFFLVDAPFPKLLLPSDVAQGEDGSGKNGVWEVTALAERIKLIPGVLEVGLF 237
Query: 211 INM---------------VDCAIIGTSDGECLVLQ 230
+ A G DG V +
Sbjct: 238 CGLTGPQAQAAGGIGGQKPTAAYFGMLDGSVSVRK 272
>gi|150008728|ref|YP_001303471.1| putative ribose 5-phosphate isomerase [Parabacteroides distasonis
ATCC 8503]
gi|149937152|gb|ABR43849.1| putative ribose 5-phosphate isomerase [Parabacteroides distasonis
ATCC 8503]
Length = 234
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K A V +G +G+G+GST+ + +A++I + IP+S C
Sbjct: 21 EDKIKIADLIASKVENGQVIGVGSGSTSYLALTRIAERIRMEHLSILAIPTSLEIRMTCA 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ S D + DG DE+DS LIKG GGA+ +EK++ ++ + ++ D SK
Sbjct: 81 QLGIPVTSLFSH-KPDWTFDGADEVDSHFNLIKGRGGAMFKEKLLISSSPQTYILVDPSK 139
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE-ELRLRRNGSGLFVSDGGNYIV 181
+V+ + +P+EI + ++ E +LR+ + G +++ GN I+
Sbjct: 140 KVERLGAKFPIPVEIFPEALTHV----EDRLHRLNPREIKLRMGQGKDGPIITENGNMIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAI 218
D + +I P+ L +I GV+E GLFIN +
Sbjct: 196 DVWMDYI--PENTESTLKSITGVLESGLFINYKVEVL 230
>gi|330718995|ref|ZP_08313595.1| ribose-5-phosphate isomerase [Leuconostoc fallax KCTC 3537]
Length = 186
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + +S T K I + +D +DL+IDG DE+D+ L IKG G ALL EK
Sbjct: 1 MDIVGVTTSEKTTLSAKELGIRIVDIDDTDGIDLTIDGADEVDTYLNGIKGGGAALLMEK 60
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR 166
I+A + + I DESK + LG LP+E+ FG + + GLN R+
Sbjct: 61 IVAKNSKENVWIVDESKVHNILGSFPLPVEVVPFGSGRLYREF----ALKGLNPRYRVDN 116
Query: 167 NGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
G V+D +YI+D I +P ++ L + GV+EHGLF+ + + I+G DG
Sbjct: 117 LG-RRIVTDAQHYIIDLVLDVINNPYELAQYLESRVGVVEHGLFLGIANRVIVGNDDG-I 174
Query: 227 LVLQK 231
VL++
Sbjct: 175 EVLER 179
>gi|320586405|gb|EFW99075.1| ribose 5-phosphate isomerase a [Grosmannia clavigera kw1407]
Length = 276
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 50/271 (18%)
Query: 4 LQMKRNAARRAIQYVVDGMT-----LGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRN 57
Q K+ AA +A V D +T +G+G+GST + +A + A+ + P+
Sbjct: 9 EQSKKAAAYQA---VKDHLTPAFRHIGIGSGSTVIYVVEAIAAQGADVTALMTFYPTGDQ 65
Query: 58 TENFCKIHHIPLHSPEDVS---SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + + L S + S+D+ DG DE+D L LIKG G L +EKI+A +A +
Sbjct: 66 SMALIEDAGLRLSSIAQLPLNTSLDVCFDGADEVDEELNLIKGGGACLFQEKIVATSAKK 125
Query: 115 FIVIGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSG 170
F+ + D K + +PIE+ + L+ L ++ + N ++R +G
Sbjct: 126 FVCVADYRKLAPRLGTNWKQGIPIEVLPLAAKRVLNELVQLGAQ---NPQIRQGLPRKAG 182
Query: 171 LFVSDGGNYIVDAFFGF-----------------IPDPQIISGELCNIPGVIEHGLFINM 213
V+D +++DA F I ++ L IPG++E GLF M
Sbjct: 183 PVVTDNSMWLIDAPFAPLQLSKDGLEAHADGENGIWTVDGLADRLIKIPGIVEMGLFTGM 242
Query: 214 --------------VDCAIIGTSDGECLVLQ 230
A G +DG + +
Sbjct: 243 NGYQIKAGHGGAQKPVAAYFGMADGSVKIRK 273
>gi|301311535|ref|ZP_07217462.1| ribose 5-phosphate isomerase A [Bacteroides sp. 20_3]
gi|300830621|gb|EFK61264.1| ribose 5-phosphate isomerase A [Bacteroides sp. 20_3]
Length = 234
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K A V +G +G+G+GST+ +I +A++I + IP+S C
Sbjct: 21 EDKIKIADLIASKVENGQVIGVGSGSTSYLALIRIAERIRTERLSILAIPTSLEIRMTCA 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ S D + DG DE+DS LIKG GGA+ +EK++ ++ + ++ D SK
Sbjct: 81 QLGIPVTSLFSH-KPDWTFDGADEVDSHFNLIKGRGGAMFKEKLLISSSPQTYILVDPSK 139
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
+V+ + +PIEI + L+ + +LR+ + G +++ GN I+D
Sbjct: 140 KVERLGAKFPIPIEIFPEALTYVEDRLQRLNP---GEIKLRMGQGKDGPIITENGNMILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAI 218
+ +I P+ L +I GV+E GLF+N +
Sbjct: 197 VWMDYI--PENTESTLKSITGVLESGLFMNYKVEVL 230
>gi|262383610|ref|ZP_06076746.1| ribose 5-phosphate isomerase A [Bacteroides sp. 2_1_33B]
gi|262294508|gb|EEY82440.1| ribose 5-phosphate isomerase A [Bacteroides sp. 2_1_33B]
Length = 234
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K A V +G +G+G+GST+ +I +A++I + IP+S C
Sbjct: 21 EDKIKIADLIASKVENGQVIGVGSGSTSYLALIRIAERIRTERLSILAIPTSLEIRMTCA 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ S + + DG DE+DS LIKG GGA+ +EK++ ++ + ++ D SK
Sbjct: 81 QLGIPVTSLFSH-KPNWTFDGADEVDSHFNLIKGRGGAMFKEKLLISSSPQTYILVDPSK 139
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
+V+ + +PIEI + L+ + +LR+ + G +++ GN I+D
Sbjct: 140 KVERLGAKFPIPIEIFPGALTYVEDRLQRLNP---GEIKLRMGQGKDGPIITENGNMILD 196
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAI 218
+ +I P+ L +I GV+E GLF+N +
Sbjct: 197 VWMDYI--PENTESTLKSITGVLESGLFMNYKVEVL 230
>gi|218883775|ref|YP_002428157.1| ribose 5-phosphate isomerase [Desulfurococcus kamchatkensis 1221n]
gi|218765391|gb|ACL10790.1| ribose 5-phosphate isomerase [Desulfurococcus kamchatkensis 1221n]
Length = 243
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 78/245 (31%), Positives = 114/245 (46%), Gaps = 22/245 (8%)
Query: 1 MDA----LQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGF--RVQ 50
MDA Q K NA A +++ D + +G+GTGST K + K + F R+
Sbjct: 1 MDASSIIEQAKLNACDYACRHLYEKYGDALVVGVGTGSTVKLLI----TKCRDFFTERIL 56
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
V S + + P V +DL IDG DE+ +L L+KG GGA LREK +A
Sbjct: 57 VPSSHDTLLHLVSLGLNTAVDPAGVDDIDLYIDGADEVSGKLDLVKGRGGAFLREKSLAV 116
Query: 111 AASRFIVIGDESKRV--DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG 168
+ + + D +K + + +PIE+ V + L+E+ LR+
Sbjct: 117 RSRVRMYVVDYTKYTGLNHIYVKPIPIEVVPVSVKYVIRKLQELGY---GEPLLRMGTGK 173
Query: 169 SGLFVSDGGNYIVDAF-FGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGEC 226
G VSD GN+IVD + DP + L + GVIE G+F N+VD ++G G
Sbjct: 174 DGPVVSDNGNFIVDYRLLKPVEDPLSLHNTLKLVHGVIETGIFPSNLVDIVVVGEPAG-V 232
Query: 227 LVLQK 231
VL K
Sbjct: 233 RVLGK 237
>gi|119953435|ref|YP_945644.1| ribose 5-phosphate isomerase [Borrelia turicatae 91E135]
gi|119862206|gb|AAX17974.1| ribose 5-phosphate isomerase [Borrelia turicatae 91E135]
Length = 228
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
+ K+ ++ AI YV M LG+GTG+T + L+ KI +G +++ P+S +T+
Sbjct: 2 EEQKKLVSQYAIDHYVKSNMHLGIGTGTTVFYAIKYLSKKIKSGDLKNLKLYPTSSDTKY 61
Query: 61 FCKIHHIPLHS--PEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
+I S + ++D++IDG DEI LIKG G A L EKI+A+ + + ++
Sbjct: 62 LLARENITYESKFTKLSKNIDITIDGADEILLETKALIKGGGAAHLMEKIVAYNSHQLLI 121
Query: 118 IGDESKRVDF-LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V R +PIEI + + + N LR ++ SG ++D
Sbjct: 122 IADETKIVQTLGTRASVPIEIVPDALAFITA----NLANMNFNPVLRTCKSKSGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ +PG++E G+F N + II +G+
Sbjct: 178 NNYILDVK-MNVENPKGAEKYFKLLPGILEIGIF-NHQNTKIIYYQNGQIK 226
>gi|167043899|gb|ABZ08587.1| putative Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
[uncultured marine crenarchaeote HF4000_APKG3H9]
Length = 224
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
M + + A++ V + T+G+G+G A F+ L+ + ++ IP+S
Sbjct: 1 MTYDDAIKALSNDALKLVKNHQTIGLGSGRAATAFVKSLSLFVKKKKLSIKCIPTSLQ-I 59
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ +D+ DG D+ID LIKG GGALLRE I+ +AA + +++
Sbjct: 60 KLEAEKGKLHLIDTVLDKIDIVFDGADQIDKGKNLIKGGGGALLRENILINAAKKVVIMA 119
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V R +P+E+ N + S G +R + F+++ GN
Sbjct: 120 DDSKFVTNFNRD-VPVEVHHLARNTVA----KHISKIGGRSRIR-TLDRGYPFITENGNI 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+D FG I P+++ ++ I GV+E G+F D S G+ V++
Sbjct: 174 ILDCNFGVIKKPKLLQEKIKKISGVLEVGIFTRKPDIIYKARSTGKFDVIK 224
>gi|298375977|ref|ZP_06985933.1| ribose 5-phosphate isomerase A [Bacteroides sp. 3_1_19]
gi|298267014|gb|EFI08671.1| ribose 5-phosphate isomerase A [Bacteroides sp. 3_1_19]
Length = 234
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K A V +G +G+G+GST+ + +A++I + IP+S C
Sbjct: 21 EDKIKIADLIASKVENGQVIGVGSGSTSYLALTRIAERIRTERLSILAIPTSLEIRMTCA 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ S D + DG DE+DS LIKG GGA+ +EK++ ++ + ++ D SK
Sbjct: 81 QLGIPVTSLFSH-KPDWTFDGADEVDSHFNLIKGRGGAMFKEKLLISSSPQTYILVDPSK 139
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE-ELRLRRNGSGLFVSDGGNYIV 181
+V+ + +P+EI + ++ E +LR+ + G +++ GN I+
Sbjct: 140 KVERLGAKFPIPVEIFPEALTHV----EDRLHRLNPREIKLRMGQGKDGPIITENGNMIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAI 218
D + +I P+ L +I GV+E GLF+N +
Sbjct: 196 DVWMDYI--PENTESTLKSITGVLESGLFMNYKVEVL 230
>gi|322693925|gb|EFY85769.1| ribose 5-phosphate isomerase A [Metarhizium acridum CQMa 102]
Length = 280
Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 50/275 (18%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFR-VQVIPSSRNTE 59
K+ AA RA++ + +G+G+GST + + K + + +P+ ++
Sbjct: 8 VESSKKLAAYRAVEDHLLPTYKFVGIGSGSTVVYVVDAIVSKGPEFYSGMTFVPTGSQSK 67
Query: 60 NFCKIHHIPLHSPEDVS-------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
+ + L ++ ++D++ DG DE+D L LIKG G L +EK++A AA
Sbjct: 68 GLIRKAGLNLCYVDERPLVNGTPVALDVAFDGADEVDQDLNLIKGGGACLFQEKLVAIAA 127
Query: 113 SRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGS 169
+F+ + D K+ +PIE+ L+ L+ + S N +R + +
Sbjct: 128 KKFVAVADSRKQSPRLCTKWKTIPIEVLPLAAPDVLTRLRAMGSP---NPAVRSGLPSKA 184
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQI------------------ISGELCNIPGVIEHGLF- 210
G V+D G +I+DA F + P+ ++ EL IPG++E GLF
Sbjct: 185 GECVTDNGMWIIDAPFSPLLLPKDLTSTENGKGKNGSWEVQTLADELLKIPGIVEIGLFH 244
Query: 211 ---------------INMVDCAIIGTSDGECLVLQ 230
A G DG+ V
Sbjct: 245 GFNGNQAAGLGKELQAQKPVAAYFGMPDGQVQVQN 279
>gi|167044594|gb|ABZ09267.1| putative Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
[uncultured marine crenarchaeote HF4000_APKG7F11]
Length = 224
Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 8/231 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTE 59
M + + A++ V + T+G+G+G A F+ L+ + ++ IP+S
Sbjct: 1 MTYDDAIKALSNDALKLVKNHQTIGLGSGRAATAFVKSLSLFVKKKKLSIKCIPTSLQ-I 59
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ +D+ DG D+ID LIKG GGALLRE I+ +AA + +++
Sbjct: 60 KLEAEKGKLHLIDTVLDKIDIVFDGADQIDKGKNLIKGGGGALLRENILINAAKKVVIMA 119
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
D+SK V R +P+E+ N + G +R + F+++ GN
Sbjct: 120 DDSKFVTNFNRD-VPVEVHHLARNTVA----KHILKIGGRSRIR-TLDRGYPFITENGNI 173
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
I+D FG I P+++ ++ I GV+E G+F D S G+ V++
Sbjct: 174 ILDCNFGVIKKPKLLQEKIKKISGVLEVGIFTRKPDIIYKARSTGKFDVIK 224
>gi|203284555|ref|YP_002222295.1| ribose 5-phosphate isomerase A [Borrelia duttonii Ly]
gi|201083998|gb|ACH93589.1| ribose 5-phosphate isomerase A [Borrelia duttonii Ly]
Length = 228
Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
+ K ++ AI YV M +G+GTG+T + L+ KI +G + P+S +T+
Sbjct: 2 EKQKELISKYAIDNYVTSNMFIGIGTGTTVFYAIKHLSYKIKSGALKNLTFYPTSSDTQC 61
Query: 61 FCKIHHIPLHS--PEDVSSVDLSIDGFDEIDSRLR-LIKGYGGALLREKIIAHAASRFIV 117
+I S + ++D++IDG DE+ + LIKG G A L EK++A+ +++ ++
Sbjct: 62 LLAKENIAYESKFTKLNKNIDITIDGADEVLLDKKALIKGGGAAHLMEKVVAYNSNQLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + + +PIEI + + L++ N LR ++ +G ++D
Sbjct: 122 IADETKIVTNLGEKTPIPIEIAPNALAFIKAKLEK----MNFNPVLRTCKSKAGPLITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D I +P+ PG++E G+F N + II +G+
Sbjct: 178 NNYILDIK-MNIENPKGTEKYFKLFPGILEIGIF-NHQNTKIIYYQNGQIK 226
>gi|212530256|ref|XP_002145285.1| ribose 5-phosphate isomerase A [Penicillium marneffei ATCC 18224]
gi|210074683|gb|EEA28770.1| ribose 5-phosphate isomerase A [Penicillium marneffei ATCC 18224]
Length = 323
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 42/254 (16%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y ++ +G+G+G+T + + + + + +P+ +++ + + +
Sbjct: 70 HYPLNAKWVGIGSGTTIVYVVEAIKELGIDTTLTRFVPTGYQSKHLITKAGLTAVEFDGI 129
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGR 130
+D++ DG DE+D L IKG G L +EKI+A A FI + D K
Sbjct: 130 PEGTVLDVAFDGADEVDDDLNCIKGGGACLFQEKIVALQAKEFICVADSRKLQTRLLTNW 189
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL-RRNGSGLFVSDGGNYIVDAFFGF-- 187
+PIE+ N+ + L E+ S +RL G +D G YIVDA F
Sbjct: 190 KYIPIEVAPIAANRVIRKLTEMGSI---QPAIRLNAVAKEGPLKTDQGFYIVDAPFLPLL 246
Query: 188 ----------------IPDPQIISGELCNIPGVIEHGLFIN---------------MVDC 216
I + + ++ ++ IPGV+E G+F
Sbjct: 247 TPSDVKAGKGGSGTGGIWEVETLATKIKAIPGVLEVGIFCGVTGPQAQALGSIGGQKPVA 306
Query: 217 AIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 307 AYFGMPDGSVTVRK 320
>gi|302348847|ref|YP_003816485.1| Ribose-5-phosphate isomerase [Acidilobus saccharovorans 345-15]
gi|302329259|gb|ADL19454.1| Ribose-5-phosphate isomerase [Acidilobus saccharovorans 345-15]
Length = 240
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 7/215 (3%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
+++ +G+GTG+T KEF++ A + G RV S + + + D
Sbjct: 19 EFIARASLVGIGTGTTVKEFLVR-ASGLLRGKRVVSSSLSTALSLSGEGVDVIYYPAGDA 77
Query: 76 SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGMLP 134
+D+ IDG DE+ +IKG GGALL EK++A + I + E K V+ RG LP
Sbjct: 78 L-IDVYIDGADEVTLSGDMIKGRGGALLGEKMLAFFSRISIFVVGEDKLVEKLGSRGPLP 136
Query: 135 IEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQII 194
+E+ S L+ G R G +SD IVD + G I DP
Sbjct: 137 LEVVPEAYPMVASELR----SMGFKVVPREGSGKVGPLISDWRGMIVDLYTGPIEDPGDF 192
Query: 195 SGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+L NIPG+++ GLF+ M D ++G D VL
Sbjct: 193 DMKLHNIPGIVDTGLFLGMADYVVVGRRDCRYEVL 227
>gi|203288089|ref|YP_002223104.1| ribose 5-phosphate isomerase A [Borrelia recurrentis A1]
gi|201085309|gb|ACH94883.1| ribose 5-phosphate isomerase A [Borrelia recurrentis A1]
Length = 228
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
+ K ++ AI YV M +G+GTG+T + L+ KI +G + P+S +T+
Sbjct: 2 EKQKELISKYAIDKYVTSNMFIGIGTGTTVFYAIKHLSYKIKSGVLKNLTFYPTSSDTQC 61
Query: 61 FCKIHHIPLHS--PEDVSSVDLSIDGFDEIDSRLR-LIKGYGGALLREKIIAHAASRFIV 117
+I S + ++D++IDG DE+ + LIKG G A L EK++A+ +++ ++
Sbjct: 62 LLAKENIAYESKFTKLNKNIDITIDGADEVLLDKKALIKGGGAAHLMEKVVAYNSNQLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + + +PIEI + K N LR ++ +G ++D
Sbjct: 122 IADETKIVTNLGEKTPIPIEIAPNALAFI----KAKLEKMNFNPVLRTCKSKAGPLITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D I +P+ PG++E G+F N + II +G+
Sbjct: 178 NNYILDIK-MNIENPKGTEKYFKLFPGILEIGIF-NHQNTKIIYYQNGQIK 226
>gi|256841237|ref|ZP_05546744.1| ribose 5-phosphate isomerase A [Parabacteroides sp. D13]
gi|256737080|gb|EEU50407.1| ribose 5-phosphate isomerase A [Parabacteroides sp. D13]
Length = 234
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCK 63
+ K A V +G +G+G+GST+ + +A++I + IP+S C
Sbjct: 21 EDKIKIADLIASKVENGQVIGVGSGSTSYLALTRIAERIRTERLSILAIPTSLEIRMTCA 80
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
IP+ S D + DG DE+DS LIKG GGA+ +EK++ ++ + ++ D SK
Sbjct: 81 QLGIPVTSLFSH-KPDWTFDGADEVDSHFNLIKGRGGAMFKEKLLISSSPQTYILVDPSK 139
Query: 124 RVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE-ELRLRRNGSGLFVSDGGNYIV 181
+V+ + +PIEI + ++ E +LR+ + G +++ GN I+
Sbjct: 140 KVERLGAKFPIPIEIFPEALTYV----EDKLQRLNPREIKLRMGQGKDGPIITENGNMIL 195
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAI 218
D + +I P+ L +I GV+E GLF+N +
Sbjct: 196 DVWMDYI--PENTESTLKSITGVLESGLFMNYKVEVL 230
>gi|322709949|gb|EFZ01524.1| ribose 5-phosphate isomerase A [Metarhizium anisopliae ARSEF 23]
Length = 280
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 50/275 (18%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFR-VQVIPSSRNTE 59
K+ AA RA++ + +G+G+GST + + K + + +P+ ++
Sbjct: 8 VESSKKLAAYRAVEDHLLPTYKFVGIGSGSTVVYVVDAIVSKGPAFYSGMTFVPTGSQSK 67
Query: 60 NFCKIHHIPLHSPEDVS-------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
K + L ++ ++D++ DG DE+D L LIKG G L +EK++A AA
Sbjct: 68 GLIKKAGLKLCYVDERPLVNGAPVALDVAFDGADEVDEDLNLIKGGGACLFQEKLVATAA 127
Query: 113 SRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGS 169
RF+ + D K+ +P+E+ L+ L+ + S N +R + +
Sbjct: 128 KRFVAVADSRKQSPRLCTKWKTIPLEVLPLAAPDVLTRLRAMGSP---NPAVRSGLPSKA 184
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQI------------------ISGELCNIPGVIEHGLF- 210
G V+D G +I+DA F + P+ ++ EL IPG++E GLF
Sbjct: 185 GECVTDNGMWIIDAPFSPLLLPKDLSSTENGKGENGSWEIQTLADELLKIPGIVEIGLFH 244
Query: 211 ---------------INMVDCAIIGTSDGECLVLQ 230
A G DG+ V
Sbjct: 245 GFNGNQAAGLGKELQAQKPVAAYFGMPDGQVQVQN 279
>gi|310795210|gb|EFQ30671.1| ribose 5-phosphate isomerase A [Glomerella graminicola M1.001]
Length = 286
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 109/277 (39%), Gaps = 54/277 (19%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTE 59
K+ AA RA+ +G+G+GST + +A K + + +P+ ++
Sbjct: 9 VETAKKAAAYRAVDEHLSPSARFVGIGSGSTVVYVVDAIAAKGPSFHSNITFLPTGSQSK 68
Query: 60 NFCKIHHIPLHSPEDVS--------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ + L + ++ +D++ DG DE+D+ L IKG G L +EK++A A
Sbjct: 69 GLIRAAGLRLCNLDERPLGADGKLVPIDVAFDGADEVDADLNCIKGGGACLFQEKLVAIA 128
Query: 112 ASRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNG 168
A +F+V+ D K +PIE+ L L + + + +R
Sbjct: 129 AKKFVVVADYRKLSSRLLTNWKAIPIEVLPMSAPDVLDRLTALGA---VKPLVRPGAPGK 185
Query: 169 SGLFVSDGGNYIVDAFFGFIPDPQ---------------------IISGELCNIPGVIEH 207
+G V+D G +++DA F + PQ ++ EL IPG++E
Sbjct: 186 AGEVVTDNGMWLIDAPFPQLLLPQDLTDASSQQLGRNSAGAWEVSALAKELLMIPGIVEI 245
Query: 208 GLF----------------INMVDCAIIGTSDGECLV 228
G+F A G DG V
Sbjct: 246 GIFHGINGLQAAQAGKEGLAQKPVAAYFGMEDGSVKV 282
>gi|154277262|ref|XP_001539472.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413057|gb|EDN08440.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 292
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 104/275 (37%), Gaps = 48/275 (17%)
Query: 1 MDALQ-MKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M ++ KRNA++ A+ Y + +G+G+G+T + + + +P+
Sbjct: 1 MSTIEDAKRNASKLAVAKHYPPNPKFVGIGSGTTIVYVVEAIKALGVDTTATGFVPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + S + + +D++ DG DE+D L IKG G L +EK++A A
Sbjct: 61 SNQLVVNAGLTSISLDALPEGAVLDVAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKE 120
Query: 115 FIVIGDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG-- 170
F+ + D K L PIE+ V + +S L+++ S +LR G
Sbjct: 121 FVCVADSRKLQRRLLTNWPSIPIEVAPLAVRRVISELQKLGSPL---PKLRNAPIKEGEH 177
Query: 171 --LFVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGLF 210
+D ++VDA F + P ++ + IPGV+E GLF
Sbjct: 178 TQPVKTDQDFFLVDAPFPKLLLPSDVAQGEDGSGKNGVWEVTALAERIKLIPGVLEVGLF 237
Query: 211 IN---------------MVDCAIIGTSDGECLVLQ 230
A G DG
Sbjct: 238 CGPTGPQAQAAGGIGGQKPTAAYFGMPDGSVSTYS 272
>gi|256423577|ref|YP_003124230.1| ribose 5-phosphate isomerase [Chitinophaga pinensis DSM 2588]
gi|256038485|gb|ACU62029.1| ribose 5-phosphate isomerase [Chitinophaga pinensis DSM 2588]
Length = 235
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
+ G T+G+G G T + LA + A + V SS +T L +P V
Sbjct: 15 MISAGQTIGLGGGKTIAYLVEQLAAQPALQASLTVTSSSFDTTALLHEKGFKLVAPAFVG 74
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGMLPI 135
+D+ DG D D+ L +K GG + EK++A AA +F+++GDESK + + +
Sbjct: 75 RLDIYFDGCDVFDANLNALKSGGGIHVMEKLLASAADKFVLLGDESKAQPKLDTKYPMVV 134
Query: 136 EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
E+ + A+ A R+ G +SD GN + D +F PD + +
Sbjct: 135 ELLPQALEIVKQAI--TARYPQTRFVQRMSTGKIGALISDNGNLLADVYFEAFPDLEQLD 192
Query: 196 GELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++ +PGV+ H LF M A+I +G +
Sbjct: 193 IQVKMLPGVVGHSLFFQMAQQAVIAGEEGVKYI 225
>gi|111115490|ref|YP_710108.1| ribose 5-phosphate isomerase [Borrelia afzelii PKo]
gi|123341299|sp|Q0SMJ6|RPIA_BORAP RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|110890764|gb|ABH01932.1| ribose 5-phosphate isomerase [Borrelia afzelii PKo]
Length = 228
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++K+ +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDRYIKSNMNLGIGTGTTVYHAIKYLSEKLKSGNLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ V ++ L+E L+ LR+ G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAPNAVGFIMTRLEE----MNLDITLRICNEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + I+ + +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHKNTK-IVYYQNKQIK 226
>gi|15595002|ref|NP_212791.1| ribose 5-phosphate isomerase (rpi) [Borrelia burgdorferi B31]
gi|226320507|ref|ZP_03796073.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 29805]
gi|6226029|sp|O51601|RPIA_BORBU RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|2688590|gb|AAC67008.1| ribose 5-phosphate isomerase (rpi) [Borrelia burgdorferi B31]
gi|226234149|gb|EEH32864.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 29805]
gi|312148232|gb|ADQ30891.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi JD1]
Length = 228
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++KI +G ++ +S +T+
Sbjct: 2 ENQKILVAKHAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLEATLRICKEKKGPTITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + + I+ D +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHK-NTRIVYYQDKQIK 226
>gi|225551838|ref|ZP_03772781.1| ribose 5-phosphate isomerase A [Borrelia sp. SV1]
gi|225371633|gb|EEH01060.1| ribose 5-phosphate isomerase A [Borrelia sp. SV1]
Length = 228
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++KI +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLGKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLETTLRICKEKKGPTITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + I+ D +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHKKTK-IVYYQDKQIK 226
>gi|216264552|ref|ZP_03436544.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 156a]
gi|215981025|gb|EEC21832.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 156a]
Length = 228
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++KI +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVTQNAVGFIMTRLEE----MNLEATLRICKEKKGPTITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + + I+ D +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHK-NTRIVYYQDKQIK 226
>gi|195941477|ref|ZP_03086859.1| ribose 5-phosphate isomerase (rpi) [Borrelia burgdorferi 80a]
gi|218249199|ref|YP_002375157.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi ZS7]
gi|224532365|ref|ZP_03672995.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi WI91-23]
gi|226321355|ref|ZP_03796882.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi Bol26]
gi|226694667|sp|B7J2L2|RPIA_BORBZ RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|218164387|gb|ACK74448.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi ZS7]
gi|224512672|gb|EEF83043.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi WI91-23]
gi|226233151|gb|EEH31903.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi Bol26]
gi|312149433|gb|ADQ29504.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi N40]
Length = 228
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++KI +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLEATLRICKEKKGPTITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + + I+ D +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHK-NTRIVYYQDKQIK 226
>gi|332796473|ref|YP_004457973.1| ribose 5-phosphate isomerase [Acidianus hospitalis W1]
gi|332694208|gb|AEE93675.1| ribose 5-phosphate isomerase [Acidianus hospitalis W1]
Length = 227
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 10/232 (4%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K A+ +I Y+ D +G+GTG T ++ + ++D + + S + K
Sbjct: 1 MDAKEIVAKYSIDYIKDKKIIGIGTGKTIRKLIETISDIDIFKTKQYIASSIDSEIELSK 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ S D+ ID FD E + ++ LIKG GGAL REK++ + I IG
Sbjct: 61 -RGFSVISLFSGIIPDVYIDSFDFLIRENNGKIVLIKGGGGALFREKLLTVNSKERIFIG 119
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
+ SK +PIEI ++ L+ + G ++R + G +SD GN
Sbjct: 120 EISKL-KVQKILQIPIEIVPVSLSYVLT----SLTSQGFRVKIRESQGKIGPLISDNGNI 174
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+D D ++ EL NI GVIE G+F ++ D I+ +DG +++K
Sbjct: 175 ILDMEVDNTQDLCKLNNELSNIVGVIETGIFCDLYDTIILADTDGRLEIIKK 226
>gi|221217861|ref|ZP_03589328.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 72a]
gi|224533378|ref|ZP_03673972.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi CA-11.2a]
gi|225548860|ref|ZP_03769837.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 94a]
gi|225549911|ref|ZP_03770872.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 118a]
gi|221192167|gb|EEE18387.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 72a]
gi|224513543|gb|EEF83900.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi CA-11.2a]
gi|225369370|gb|EEG98822.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 118a]
gi|225370463|gb|EEG99899.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 94a]
Length = 228
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++KI +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSGSLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLEATLRICKEKKGPTITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + + I+ D +
Sbjct: 178 NNYILDVK-MHMENPEGTEKYFKLFPGILEIGIFNHK-NTRIVYYQDKQIK 226
>gi|216263505|ref|ZP_03435500.1| ribose 5-phosphate isomerase A [Borrelia afzelii ACA-1]
gi|215980349|gb|EEC21170.1| ribose 5-phosphate isomerase A [Borrelia afzelii ACA-1]
Length = 228
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++K+ +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDRYIKSNMNLGIGTGTTVYHAIKYLSEKLKSGNLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ V ++ L+E L+ LR+ G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAPNAVGFIMTRLEE----MNLDITLRICNEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F N + I+ + +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIF-NHQNTKIVYYQNKQIK 226
>gi|119471525|ref|XP_001258186.1| ribose 5-phosphate isomerase A [Neosartorya fischeri NRRL 181]
gi|119406338|gb|EAW16289.1| ribose 5-phosphate isomerase A [Neosartorya fischeri NRRL 181]
Length = 272
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 96/253 (37%), Gaps = 41/253 (16%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+GST + + + + + +P+ ++ + + +
Sbjct: 20 HYPKDAKFVGIGSGSTIVYVVEAIKESGIDTSMTRYVPTGFQSKQLILSAGLTAVEFDSL 79
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGR 130
+D++ DG DE+D L LIKG G L +EKI+A A FI + D K
Sbjct: 80 PEGTVLDVAFDGADEVDDELNLIKGGGACLFQEKIVALQAKEFICVADSRKLQSRLLTNW 139
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF--- 187
+PIE+ + L+ L+E+ S +RL G +D YI+DA F
Sbjct: 140 KYIPIEVAPIAAPRVLTKLRELGSI---QPAIRLSGTSKGPLKTDQDFYIIDAPFPPLLT 196
Query: 188 ---------------IPDPQIISGELCNIPGVIEHGLFIN---------------MVDCA 217
I + ++ + I GV+E G+F A
Sbjct: 197 KADVAAGNDGNGKGGIWEVDALAQAIKMIAGVLEVGIFSGVTGPQAQALGGIGGQKPIAA 256
Query: 218 IIGTSDGECLVLQ 230
G DG V +
Sbjct: 257 YFGMPDGTVSVRK 269
>gi|39944204|ref|XP_361639.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145607257|ref|XP_001407652.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|58257477|gb|AAW69360.1| ribose 5-phosphate isomerase-like protein [Magnaporthe grisea]
gi|145014844|gb|EDJ99412.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145014847|gb|EDJ99415.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 297
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 67/265 (25%), Positives = 107/265 (40%), Gaps = 45/265 (16%)
Query: 6 MKRNAARRAIQYVVDG-----MTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRNTE 59
K+ AA A V D +G+G+GST + + + + P+ ++
Sbjct: 20 AKKAAAFTA---VKDHLDPRYTHVGIGSGSTVVYVVEAIKELHPEASKDMTFYPTGDQSK 76
Query: 60 NFCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
K + ED +D+ DG DE D+ L LIKG GG L +EKI+A A+ F+
Sbjct: 77 GLIKAGGLRAAPIEDRPQGSLLDVYFDGADEADADLNLIKGGGGCLWQEKIVAVASRTFV 136
Query: 117 VIGDESKRV---DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFV 173
IGD K + +PIE+ + L+ L+ + + + LR +G V
Sbjct: 137 CIGDFRKLSRNLGTQWKQGIPIEVLPKAADHVLAELERLGAH---SPRLRSGSGKAGSVV 193
Query: 174 SDGGNYIVDAFFGF--------------IPDPQIISGELCNIPGVIEHGLFINM------ 213
+D G +I+DA F I ++ +L ++ GV E GLF
Sbjct: 194 TDNGMHIIDAPFTPLLLAGDEGGTGENGIWSVDRLAAKLKSLVGVCEIGLFYGRSGLDAK 253
Query: 214 -------VDCAIIGTSDGECLVLQK 231
A G +DG +L +
Sbjct: 254 DEGGAQKPVAAYFGMADGSVQILNQ 278
>gi|223889368|ref|ZP_03623954.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 64b]
gi|223885054|gb|EEF56158.1| ribose 5-phosphate isomerase A [Borrelia burgdorferi 64b]
Length = 228
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++KI + ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKIKSDSLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLEATLRICKEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + + I+ D +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHK-NTRIVYYQDKQIK 226
>gi|224531804|ref|ZP_03672436.1| ribose 5-phosphate isomerase A [Borrelia valaisiana VS116]
gi|224511269|gb|EEF81675.1| ribose 5-phosphate isomerase A [Borrelia valaisiana VS116]
Length = 228
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++K+ +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKLKSGNLKNLKFYTTSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSREQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L+ LR+ G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQSAVGFIMTRLEE----MNLDTTLRICNEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + I+ + +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHKNTK-IVYYQNKQIK 226
>gi|70992201|ref|XP_750949.1| ribose 5-phosphate isomerase A [Aspergillus fumigatus Af293]
gi|66848582|gb|EAL88911.1| ribose 5-phosphate isomerase A [Aspergillus fumigatus Af293]
gi|159124517|gb|EDP49635.1| ribose 5-phosphate isomerase A [Aspergillus fumigatus A1163]
Length = 272
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 41/253 (16%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+GST + + + + + +P+ ++ + + +
Sbjct: 20 HYPKDAKFVGIGSGSTIVYVVEAIKESGIDTSMTRYVPTGFQSKQLILSAGLTAVDFDSL 79
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGR 130
+D++ DG DE+D L LIKG G L +EKI+A A FI + D K
Sbjct: 80 PEGTVLDVAFDGADEVDDELNLIKGGGACLFQEKIVALQAKEFICVADSRKLQSRLLTNW 139
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF--- 187
+PIE+ + L+ L+E+ S +R G +D YI+DA F
Sbjct: 140 KYIPIEVAPIAAPRVLTKLRELGSI---QPAIRPSGTSKGPLKTDQDFYIIDAPFPPLLT 196
Query: 188 ---------------IPDPQIISGELCNIPGVIEHGLFIN---------------MVDCA 217
I + ++ + I GV+E G+F A
Sbjct: 197 KADVAAGKDGSGKGGIWEVDALAQAIKMIAGVLEVGIFSGVTGPQAQALGGVGGQKPIAA 256
Query: 218 IIGTSDGECLVLQ 230
G DG V +
Sbjct: 257 YFGMPDGTVSVRK 269
>gi|255956557|ref|XP_002569031.1| Pc21g20440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590742|emb|CAP96941.1| Pc21g20440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 271
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 105/271 (38%), Gaps = 43/271 (15%)
Query: 1 MDA-LQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
M A + KR AA+ A++ Y D +G+G+GST + + + + + IP+
Sbjct: 1 MSAVEEAKRTAAKVAVEKHYPKDARWVGIGSGSTIVYVVEAITNLGVDTSNTKYIPTGYQ 60
Query: 58 TENFCKIHHIPLHSPEDVS---SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
++ + + + +D++ DG DE+D L IKG G L +EKI+A A
Sbjct: 61 SKQLIVNAGLMAVEYDALPLGTVLDVAFDGADEVDEDLNCIKGGGACLFQEKIVALQAKE 120
Query: 115 FIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLF 172
FI + D K +PIE+ + + LKE+ S G
Sbjct: 121 FICVADHRKLQPRLLTSWKSIPIEVAPIAAYRVIQKLKELGSIN--PAVRPSASVKEGPL 178
Query: 173 VSDGGNYIVDAFFGFI---PDPQI---------------ISGELCNIPGVIEHGLFIN-- 212
+D +IVDA F + D + ++ ++ I GV+E G+F
Sbjct: 179 KTDQDFFIVDAPFKPMLIKADIEAGQDGNGKDGVWAVEVLARKIKEIIGVLEVGIFHGQT 238
Query: 213 -------------MVDCAIIGTSDGECLVLQ 230
A G SDG V +
Sbjct: 239 GPQAAAAGGLGGQRPVAAYFGMSDGTVAVRK 269
>gi|224534514|ref|ZP_03675090.1| ribose 5-phosphate isomerase A [Borrelia spielmanii A14S]
gi|224514191|gb|EEF84509.1| ribose 5-phosphate isomerase A [Borrelia spielmanii A14S]
Length = 228
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L +K+ +G ++ +S +T+
Sbjct: 2 ENQKILVAKYAIDHYIKSNMNLGIGTGTTVYHAIKYLIEKLKSGNLKNLKFYTTSNDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L+ LR+ G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLDTTLRICNEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + I+ + +
Sbjct: 178 NNYILDVK-MHVENPEGAEKYFKLFPGILEIGIFNHKNTK-IVYYQNKQIK 226
>gi|51598912|ref|YP_073100.1| ribose 5-phosphate isomerase [Borrelia garinii PBi]
gi|51573483|gb|AAU07508.1| ribose 5-phosphate isomerase [Borrelia garinii PBi]
Length = 228
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ AI Y+ M LG+GTG+T + L++KI +G +++ +S +T+
Sbjct: 2 ENQKMLVAKYAIDRYIKSNMNLGVGTGTTIYYAIKYLSEKIKSGNLKNLKLYATSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPCESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L+ LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMSIPIEVAQNAVGFIMTRLEE----MNLDTTLRVCKEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + I+ + +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHKNTK-IVYYQNKQIK 226
>gi|219685694|ref|ZP_03540507.1| ribose 5-phosphate isomerase A [Borrelia garinii Far04]
gi|219672744|gb|EED29770.1| ribose 5-phosphate isomerase A [Borrelia garinii Far04]
Length = 228
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG----FRVQVIPSSRNT 58
K A+ AI Y+ M LG+GTG+T + L++K+ +G ++ S
Sbjct: 2 ENQKMLVAKYAIDHYIKSNMNLGIGTGTTIYYAIKYLSEKLKSGNLKNLKLHATSSDSKY 61
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + + ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L+ LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLDTTLRVCKEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + I+ + +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHKNTK-IVYYQNKQIK 226
>gi|300767010|ref|ZP_07076923.1| ribose 5-phosphate epimerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300495548|gb|EFK30703.1| ribose 5-phosphate epimerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 222
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ ++A+ + M +G G GST E + A+ + + + V+ S T
Sbjct: 1 MTIKQAIVQQALTLIKPQMVVGFGGGSTVGELVKEAANHVND---ITVVTPSPTTRQLAT 57
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + +D++ DG D++D +K GG EKIIA A + ++ + +
Sbjct: 58 VLGYTVVDTAYCDRIDIAFDGCDQLDHHGNALKSGGGIHANEKIIASLADEYWLLTMQDR 117
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD + L +E+ ++ + S G +R N G ++D GN ++D
Sbjct: 118 LVDQFDIKTPLVLEVLPAALSLVMR----TVSDLGGQATIRTANNRDGFTLTDSGNLLID 173
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
F ++ EL + GV+E F ++V A +G +
Sbjct: 174 CHFPTYAKLTDLNVELATLAGVVETSYFDHLVTNAWLGDA 213
>gi|76798505|ref|ZP_00780740.1| ribose 5-phosphate isomerase A [Streptococcus agalactiae 18RS21]
gi|76586134|gb|EAO62657.1| ribose 5-phosphate isomerase A [Streptococcus agalactiae 18RS21]
Length = 143
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFG 141
+DG DE+D IKG GGALL EKI+A +I + DESK V+ LG LP+E+ ++G
Sbjct: 1 MDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKLPVEVVRYG 60
Query: 142 VNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNI 201
+ K C R F++D GNYI+D I DP+ ++ EL +
Sbjct: 61 SERLFRVFKSKGYC------PSFRETEGDRFITDMGNYIIDLDLKKIEDPKQLANELDHT 114
Query: 202 PGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GV+EHGLF +MV+ I+ +G +L+K
Sbjct: 115 VGVVEHGLFNSMVNKVIVAGKNG-LDILEK 143
>gi|156049403|ref|XP_001590668.1| hypothetical protein SS1G_08408 [Sclerotinia sclerotiorum 1980]
gi|154692807|gb|EDN92545.1| hypothetical protein SS1G_08408 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 342
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 66/299 (22%), Positives = 105/299 (35%), Gaps = 84/299 (28%)
Query: 7 KRNAARRAIQYVVDG-----MTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
KR AA +A V D +G+G+GST + +A K ++ +P+ ++
Sbjct: 41 KRRAAYKA---VEDHFDPTYKYIGIGSGSTVVYVVEAIAAKGREITSQMIFVPTGDQSKQ 97
Query: 61 FCKIHHIPLHSPEDVS-------------------------------SVDLSIDGFDEID 89
+PL S + + S+D++ DG DEID
Sbjct: 98 LIIEAGLPLGSIDSLPPVVVEPLHLSGDAAFDVSTGLQDLGLKGKRESLDVAFDGADEID 157
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLS 147
L IKG G L +EK++A ++ +F+ + D K +PIEI
Sbjct: 158 EDLNCIKGGGACLFQEKLVATSSKKFVCVADYRKLQPRLLTSWKAIPIEIAPLAAPTIKR 217
Query: 148 ALKEVASCFGLNEELRLRRNG---SGLFVSDGGNYIVDAFFGFIPDPQI----------- 193
+ + ++R+ G +G V+D G +I+DA F + P
Sbjct: 218 -----ILITLGSPDPKIRQGGSAKAGPVVTDNGMWIIDAPFPKLLIPSDLKGNDKGDGEH 272
Query: 194 -------ISGELCNIPGVIEHGLFINM----------------VDCAIIGTSDGECLVL 229
+ L I GV+E GLF A G DG V
Sbjct: 273 GTWEVHNLGRRLKRIVGVLETGLFHGRNGAQVANAGEEGGGQKPVAAYFGMEDGNVEVR 331
>gi|154317487|ref|XP_001558063.1| hypothetical protein BC1G_03095 [Botryotinia fuckeliana B05.10]
gi|150844269|gb|EDN19462.1| hypothetical protein BC1G_03095 [Botryotinia fuckeliana B05.10]
Length = 344
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 64/296 (21%), Positives = 107/296 (36%), Gaps = 78/296 (26%)
Query: 7 KRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
KR AA RA++ + +G+G+GST + +A K + ++ +P+ ++
Sbjct: 43 KRRAAYRAVEDHFDPSYKYVGIGSGSTVVYVVEAIAAKGRDITSKMIFVPTGDQSKQLII 102
Query: 64 IHHIPLHSPEDVS-------------------------------SVDLSIDGFDEIDSRL 92
+PL S + + S+D++ DG DEID L
Sbjct: 103 EAGLPLGSIDSLPPVVAEPLHLSGDAAFDVSTGLQDLGLKGKRESLDVAFDGADEIDEDL 162
Query: 93 RLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALK 150
IKG G L +EK++A ++ +F+ + D K +PIEI
Sbjct: 163 NCIKGGGACLFQEKLVATSSKKFVCVADYRKLQPRLLTSWKAIPIEIAPLAAPTIKR--- 219
Query: 151 EVASCFGLNEELRLRRNG---SGLFVSDGGNYIVDAFFGFI------------------P 189
+ + ++R+ G +G V+D G +I+DA F +
Sbjct: 220 --ILITLGSPDPKIRQGGSAKAGPVVTDNGMWIIDAPFPKLLIHSDLKGNDKGDGENGTW 277
Query: 190 DPQIISGELCNIPGVIEHGLFINM----------------VDCAIIGTSDGECLVL 229
+ + L I GV+E GLF A G DG V
Sbjct: 278 EVHNLGRRLKRIVGVLETGLFHGRNGAQVANAGEEGGGQKPVAAYFGMEDGNVEVR 333
>gi|121699800|ref|XP_001268165.1| ribose 5-phosphate isomerase A [Aspergillus clavatus NRRL 1]
gi|119396307|gb|EAW06739.1| ribose 5-phosphate isomerase A [Aspergillus clavatus NRRL 1]
Length = 272
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 98/255 (38%), Gaps = 41/255 (16%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A Y + +G+G+GST + + + + + + +P+ ++ + +
Sbjct: 18 ANHYPTNPKFVGIGSGSTIVYVVEAIKESGIDTSQTKYVPTGFQSKQLILSAGLTAVEFD 77
Query: 74 DVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FL 128
+ +D++ DG DE+D L LIKG G L +EKI+A A FI + D K
Sbjct: 78 SLPEGTVLDVAFDGADEVDDELNLIKGGGACLFQEKIVALQAKEFICVADSRKLQSRLLT 137
Query: 129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGF- 187
+PIE+ + L+ L+E+ S +RL G +D Y++DA F
Sbjct: 138 NWKYIPIEVAPIAAPRVLTKLRELGSI---QPAIRLSGTSKGPLKTDQDFYLIDAPFPPL 194
Query: 188 -----------------IPDPQIISGELCNIPGVIEHGLFIN---------------MVD 215
+ + ++ + I GV+E G+F
Sbjct: 195 LTKADVAAGKDGSGKAGVWEANALAQAIKMIAGVLEVGIFSGVTGPQAQALGGIGGQKPI 254
Query: 216 CAIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 255 AAYFGMPDGSVSVRK 269
>gi|28377270|ref|NP_784162.1| ribose 5-phosphate epimerase [Lactobacillus plantarum WCFS1]
gi|254555486|ref|YP_003061903.1| ribose 5-phosphate epimerase [Lactobacillus plantarum JDM1]
gi|28270101|emb|CAD63001.1| ribose 5-phosphate epimerase [Lactobacillus plantarum WCFS1]
gi|254044413|gb|ACT61206.1| ribose 5-phosphate epimerase [Lactobacillus plantarum JDM1]
Length = 222
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ ++A+ + M +G G GST E + A+ + + + V+ S T
Sbjct: 1 MTIKQAIVQQALTLIKPQMVVGFGGGSTVGELVKEAANHVND---ITVVTPSPTTRQLAT 57
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + VD++ DG D++D +K GG EKIIA A + ++ + +
Sbjct: 58 VLGYTVVDTAYCDRVDIAFDGCDQLDHHGNALKSGGGIHANEKIIASLADEYWLLTMQDR 117
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD + L +E+ ++ + S G +R N G ++D GN ++D
Sbjct: 118 LVDQFDIKTPLVLEVLPAALSLVMR----TVSDLGGQATIRTANNRDGFTLTDSGNLLID 173
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
F ++ EL + GV+E F ++V A +G +
Sbjct: 174 CHFPTYAKLTDLNVELATLAGVVETSYFDHLVTNAWLGDA 213
>gi|326529259|dbj|BAK01023.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 194
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 9/192 (4%)
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
V +P+S TE IP+ + D + + LSIDG DE+D L L+KG GG+LLREK+I
Sbjct: 2 VAGVPTSLKTEAHAARVGIPMLALADAAEIHLSIDGADEVDPDLNLVKGRGGSLLREKMI 61
Query: 109 AHAASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRR 166
A +RF+VI DESK V G +P+E+ FG TL +++V G + LR +
Sbjct: 62 EGAGARFVVIVDESKLVPRLGCTGAVPVEVVPFGSVYTLGLIRKVFDKLPGFHARLRTVK 121
Query: 167 NGSG-----LFVSDGGNYIVDAFFGF-IP-DPQIISGELCNIPGVIEHGLFINMVDCAII 219
+ +G LF++D GNYIV+ FF I + + IS L I GV+EHG+F+ M I+
Sbjct: 122 SKAGDHQEDLFLTDNGNYIVEMFFDDGIHGNLRDISDSLLRITGVVEHGMFLGMATKVIV 181
Query: 220 GTSDGECLVLQK 231
DG VL +
Sbjct: 182 AKKDGTVAVLSR 193
>gi|219684324|ref|ZP_03539268.1| ribose 5-phosphate isomerase A [Borrelia garinii PBr]
gi|219672313|gb|EED29366.1| ribose 5-phosphate isomerase A [Borrelia garinii PBr]
Length = 228
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 4 LQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTEN 60
K A+ +I Y+ M LG+GTG+T + L++K+ +G +++ +S +T+
Sbjct: 2 ENQKMLVAKYSIDHYIKSNMNLGIGTGTTIYYAIKYLSEKLKSGNLKNLKLYATSSDTKY 61
Query: 61 FCKIHHIPLHSPED--VSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIAHAASRFIV 117
IP S ++D++IDG DEI + LIKG GGA L EK+IA+ + ++
Sbjct: 62 LLSKEQIPYESNFSKLNKNLDIAIDGADEILLEKKSLIKGMGGAHLMEKVIAYNSETLLI 121
Query: 118 IGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
I DE+K V + +PIE+ Q V ++ L+E L LR+ + G ++D
Sbjct: 122 IADETKIVKKLGTKMPIPIEVAQNAVGFIMTRLEE----MNLETTLRVCKEKKGPIITDN 177
Query: 177 GNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
NYI+D + +P+ PG++E G+F + I+ + +
Sbjct: 178 NNYILDVK-MHVENPEGTEKYFKLFPGILEIGIFNHKNTK-IVYYQNKQIK 226
>gi|296814074|ref|XP_002847374.1| ribose 5-phosphate isomerase A [Arthroderma otae CBS 113480]
gi|238840399|gb|EEQ30061.1| ribose 5-phosphate isomerase A [Arthroderma otae CBS 113480]
Length = 269
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 93/251 (37%), Gaps = 44/251 (17%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+G+T + + + + +P+ + + + + +
Sbjct: 19 HYPKDAKFIGIGSGTTIVYVVEAIKELGIDTSATSFVPTGYQSNQLIVDAGLTAIAFDAL 78
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+D + DG DE+D L IKG G L +EK++A A FI + D K L
Sbjct: 79 PEGTVLDAAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKEFICVADWRKNQSRLLTSW 138
Query: 133 L--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGF 187
PIE+ + + LK + LR+N SG +D +IVDA F
Sbjct: 139 PSIPIEVAPLAARRVIDELK-----LLGSPNPLLRQNPREKSGPVKTDQSFFIVDAPFPK 193
Query: 188 IPDP----------------QIISGELCNIPGVIEHGLFIN---------------MVDC 216
+ P + ++ + I GV+E GLF
Sbjct: 194 LLLPSDIAAGQKAEGGAWEVEKLANAINAITGVLEVGLFCGPTGPQAQASRRVGGQKPVA 253
Query: 217 AIIGTSDGECL 227
A G +DG +
Sbjct: 254 AYFGYTDGTVV 264
>gi|126641960|ref|YP_001084944.1| ribose 5-phosphate isomerase [Acinetobacter baumannii ATCC 17978]
Length = 152
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 72 PEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR- 130
V S+D +DG DEID + +IKG G AL REKI+A A +F+ I D+SK VD LGR
Sbjct: 1 MNHVGSLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRD 60
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPD 190
LP+E+ + G + R V+D GN I+D F I +
Sbjct: 61 FPLPVEVIPMARSAVARK----LVSLGGDPVYREG------VVTDNGNIILDVFNLNILN 110
Query: 191 PQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECL 227
+ + NIPGV+ +G+F +N AI+ T+DG
Sbjct: 111 AIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEE 148
>gi|6002739|gb|AAF00117.1|AF141971_4 ribose-5-phosphate isomerase A homolog [Haemophilus ducreyi]
Length = 162
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ I + + +V+ +D+ IDG DEI + +IKG G AL REKI++ A +FI + D
Sbjct: 2 QLRAMGIEVFNANEVAGLDVYIDGADEITPQGAMIKGGGAALTREKIVSSLAKQFICMVD 61
Query: 121 ESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
SK+VD LP+E+ + G + E R V+D GN
Sbjct: 62 SSKQVDVLGSSFPLPVEVIPMARSYVARQ----LVALGGSPEYREG------VVTDNGNV 111
Query: 180 IVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLV 228
I+D I +P + + NI GV+ +G+F + I+GT++G ++
Sbjct: 112 ILDVHNFNIYEPLKMEHTINNIAGVVTNGIFAQRYANIIIVGTAEGAKII 161
>gi|308179488|ref|YP_003923616.1| ribose 5-phosphate epimerase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308044979|gb|ADN97522.1| ribose 5-phosphate epimerase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 222
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ +K+ ++A+ + M +G G GST E + A+ + + + V+ S T
Sbjct: 1 MTIKQAIVQQALTLIKPQMVVGFGGGSTVGELVKEAANHVND---ITVVTPSPTTCQLAT 57
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + VD++ DG D++D +K GG EKIIA A + ++ + +
Sbjct: 58 VLGYTVVDTAYCDRVDIAFDGCDQLDHHGNALKSGGGIHANEKIIASLADEYWLLTMQDR 117
Query: 124 RVDFLG-RGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVD 182
VD + L +E+ ++ + S G +R N G ++D GN ++D
Sbjct: 118 LVDQFDIKTPLVLEVLPAALSLVMR----TVSDLGGQATIRTANNRDGFTLTDSGNLLID 173
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
F ++ EL + GV+E F ++V A +G +
Sbjct: 174 CHFPTYAKLTDLNVELATLAGVVETSYFDHLVTNAWLGDA 213
>gi|67523969|ref|XP_660044.1| hypothetical protein AN2440.2 [Aspergillus nidulans FGSC A4]
gi|40744990|gb|EAA64146.1| hypothetical protein AN2440.2 [Aspergillus nidulans FGSC A4]
gi|259487853|tpe|CBF86858.1| TPA: ribose 5-phosphate isomerase A (AFU_orthologue; AFUA_6G10610)
[Aspergillus nidulans FGSC A4]
Length = 273
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 97/254 (38%), Gaps = 42/254 (16%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+GST + + + + +P+ ++ + + +
Sbjct: 20 HYPKDAKFVGIGSGSTIVYVVEAIKELGIDTSGTCYVPTGFQSKQLIVSAGLTAVDFDAI 79
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGR 130
+D++ DG DE+D L LIKG G L +EKI+A A FI + D K
Sbjct: 80 PEGTVLDIAFDGADEVDDELNLIKGGGACLFQEKIVALQAKEFICVADSRKLQSRLLSNW 139
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN-GSGLFVSDGGNYIVDAFFGF-- 187
+PIE+ + L AL+++ S N LR + G +D YI+DA F
Sbjct: 140 KYIPIEVAPIAAKRVLPALRQLGSI---NPVLRPQTGSKLGPLKTDQDFYIIDAPFPTLL 196
Query: 188 ----------------IPDPQIISGELCNIPGVIEHGLFIN---------------MVDC 216
I + +S + IPGV++ G+F
Sbjct: 197 TKADVAAGKDGSGKDGIWEVDALSLAIKQIPGVLDVGIFSGVTGPQAQALGGIGGQKPVA 256
Query: 217 AIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 257 AYFGMPDGSVQVRK 270
>gi|46111197|ref|XP_382656.1| hypothetical protein FG02480.1 [Gibberella zeae PH-1]
Length = 281
Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 54/277 (19%)
Query: 3 ALQMKRNAARRAIQYVVDGM--TLGMGTGSTAKEFMILLADKIANGFR-VQVIPSSRNTE 59
K+ AA +A+ +D +G+G+GST + + K ++ + IP+ ++
Sbjct: 8 VESAKKLAAYQAVNDHLDASYKFVGIGSGSTVVYVVDAIVSKGPEFYKGMTFIPTGSQSK 67
Query: 60 NFCKIHHIPLHSPEDVSS-------VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
+ + L + ++ +D++ DG DE+D L LIKG G L +EK++A AA
Sbjct: 68 GLIRAAGLNLVNLDERPMVDGLPVPLDVAFDGADEVDEDLNLIKGGGACLFQEKLVAIAA 127
Query: 113 SRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR---RN 167
+FI + D K+ +PIE+ L L+ + + + +R
Sbjct: 128 KKFIAVADYRKQSPKLCTTWKTIPIEVLPLSAPDVLVRLRAM-----GSPKPAIRSGLPA 182
Query: 168 GSGLFVSDGGNYIVDAFFGFIPDPQ------------------IISGELCNIPGVIEHGL 209
+G V+D G +++DA F + P+ ++ EL PG++E GL
Sbjct: 183 KAGECVTDNGMWLIDAPFSPLLLPKDINSENKGRGENGAWEVNALAEELVRTPGIVEIGL 242
Query: 210 F----------------INMVDCAIIGTSDGECLVLQ 230
F A G ++GE V
Sbjct: 243 FHGFNGNEAVKLGKESQAQKPIAAYFGLANGEVQVQN 279
>gi|145243006|ref|XP_001394051.1| ribose 5-phosphate isomerase A [Aspergillus niger CBS 513.88]
gi|134078718|emb|CAK48280.1| unnamed protein product [Aspergillus niger]
Length = 273
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 42/254 (16%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+GST + + + + + +P+ ++ + + +
Sbjct: 20 HYPKDAKYVGIGSGSTIVYVVEAIKESGVDTSATKYVPTGFQSKQLIVNAGLTAVDFDAL 79
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGR 130
+D++ DG DE+D L LIKG G L +EKI+A A FI + D K G
Sbjct: 80 PEGTVLDVAFDGADEVDDELNLIKGGGACLFQEKIVALQAKEFICVADSRKLQSRLLTGW 139
Query: 131 GMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN-GSGLFVSDGGNYIVDAFFGF-- 187
+PIE+ + L ALKE+ S + +R+ + G +D +I+DA F
Sbjct: 140 KYIPIEVAPIAARRVLGALKEIGSI---DPAVRVNSDAKQGPLKTDQAFFIIDAPFKTLL 196
Query: 188 ----------------IPDPQIISGELCNIPGVIEHGLFINMVD---------------C 216
+ + +S + IPGV++ G+F M
Sbjct: 197 TQADVAAGKDGSGKDGVWEVHALSQAIKQIPGVLDVGIFSGMTGPQAQALGGVGGQKPIA 256
Query: 217 AIIGTSDGECLVLQ 230
A G DG V +
Sbjct: 257 AYFGMPDGSVSVRK 270
>gi|58613537|gb|AAW79355.1| chloroplast ribose-5-phosphate isomerase [Isochrysis galbana]
Length = 169
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 70 HSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FL 128
+ ++D+ IDG D +D+ L +IKG GGA LREK++A AA+R +VI DESK +
Sbjct: 3 STLASHPNIDVCIDGADAVDANLNIIKGGGGAHLREKMVAEAAARLVVIVDESKMCESLG 62
Query: 129 GRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG-SGLFVSDGGNYIVDAFFG- 186
LP+E+ FG TL + ++ S G LR+ GL+ +D GNYIVD G
Sbjct: 63 PSFPLPVEVTPFGHLHTLRRIGQLHSLSGSAAAPYLRQLKAGGLYTTDNGNYIVDVACGK 122
Query: 187 FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I D ++ EL + GV+ HGLF M I+ DG ++
Sbjct: 123 PIADTVAVAAELSRLTGVVAHGLFNQMASEVIVAGKDGVSVI 164
>gi|302891639|ref|XP_003044701.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725626|gb|EEU38988.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 280
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 50/275 (18%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFR-VQVIPSSRNTE 59
K+ AA +A+ + + +G+G+GST + + K + + IP+ ++
Sbjct: 7 VESAKKQAAYQAVNDHLLPEYKYVGIGSGSTVVYVVEAIVSKGPEFYGGMTFIPTGSQSK 66
Query: 60 NFCKIHHIPLHSPEDVSS-------VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
+ + L ++ + +D++ DG DE+D L LIKG G L +EK++A AA
Sbjct: 67 GLIRAAGLKLAILDERPTVDGVPVALDVAFDGADEVDEDLNLIKGGGACLFQEKLVAIAA 126
Query: 113 SRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGS 169
+FI + D K+ +PIE+ L+ L+ + S N +R + +
Sbjct: 127 KKFIAVADYRKQSPRLCTTWKTIPIEVLPMAAPDVLTRLRAMGSP---NPVVRSGLPSKA 183
Query: 170 GLFVSDGGNYIVDAFFGF------------------IPDPQIISGELCNIPGVIEHGLF- 210
G V+D G +++DA F + + ++ EL +PG++E GLF
Sbjct: 184 GECVTDNGMWLIDAPFPPLLLAKDITSEVDGQGKDGVWEINALAQELVRLPGIVEIGLFH 243
Query: 211 ---------------INMVDCAIIGTSDGECLVLQ 230
A G ++GE V
Sbjct: 244 GFNGDEAVKLGKQLQAQKPVAAYFGLANGEVQVQN 278
>gi|156937222|ref|YP_001435018.1| ribose 5-phosphate isomerase [Ignicoccus hospitalis KIN4/I]
gi|156566206|gb|ABU81611.1| ribose 5-phosphate isomerase [Ignicoccus hospitalis KIN4/I]
Length = 221
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 7 KRNAARRAIQYVVDG--MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K ARRA + V LG+G+G+T + F+ L + +G +P+S +T K
Sbjct: 4 KEAVARRAAELVASEAPEVLGVGSGTTVRLFIKYLKEFGFSGL---TVPTSYDTALELKK 60
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEI---DSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
H + + V V+LS+DG DE+ + L +KG G A+LREK++A+ + + I I DE
Sbjct: 61 HGLKVLDLMSVDEVELSVDGADEVFTMNGSLYAVKGGGAAMLREKVLAYISRKRIYIVDE 120
Query: 122 SKRVDFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
K +P+ E+ + G+ +LR + G V+D GN
Sbjct: 121 GKVSGSPCSRGVPVPAEVVPSSLPAVAR----GLKLLGVGWKLREAKGKLGPVVTDNGNL 176
Query: 180 IVDAFFG-FIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIG 220
++D I + + +PGV GLF +++D ++G
Sbjct: 177 VIDMDCKSSINVIEKVE----ALPGVAVTGLFGPDLIDKVVVG 215
>gi|302656027|ref|XP_003019771.1| hypothetical protein TRV_06194 [Trichophyton verrucosum HKI 0517]
gi|291183540|gb|EFE39147.1| hypothetical protein TRV_06194 [Trichophyton verrucosum HKI 0517]
Length = 269
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 44/255 (17%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+G+T + + + +P+ + + + + +
Sbjct: 19 HYPKDAKFIGIGSGTTIVYVVEAIKALGIDTSATSFVPTGYQSNQLIVNAGLTAIAFDAL 78
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+D + DG DE+D L IKG G L +EK++A A FI + D K L
Sbjct: 79 PEGTVLDAAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKEFICVADWRKNQSRLLTSW 138
Query: 133 L--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGF 187
PIE+ + + LK + + LR++ +G +D G IVDA F
Sbjct: 139 PSIPIEVAPLAARRVMDELKAL-----GSPNPILRQDPVAKAGPLKTDQGFLIVDAPFPA 193
Query: 188 IPDP----------------QIISGELCNIPGVIEHGLFIN---------------MVDC 216
+ P + ++ + I GV+E GLF
Sbjct: 194 LLLPSDIAAGKKAEGGVWEVEALANAINAITGVLEVGLFCGPNGPQAQANGRVGGQKPVA 253
Query: 217 AIIGTSDGECLVLQK 231
A G +DG + +K
Sbjct: 254 AYFGNTDGTVISKRK 268
>gi|302407041|ref|XP_003001356.1| ribose-5-phosphate isomerase [Verticillium albo-atrum VaMs.102]
gi|261359863|gb|EEY22291.1| ribose-5-phosphate isomerase [Verticillium albo-atrum VaMs.102]
Length = 281
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 24 LGMGTGSTAKEFMILLADKIANGF-RVQVIPSSRNTENFCKIHHIPLHSPEDVS------ 76
+G+G+GST + +A K + + + P+ ++ + + L + +D
Sbjct: 30 VGIGSGSTVVYVVDAIAAKGPSFWGEMTFFPTGSQSKGLIRAAGLRLCNLDDRPLESGKP 89
Query: 77 -SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGRGML 133
++D++ DG DE+D+ L IKG G LL+EK++A AA +F+V+ D K + +
Sbjct: 90 VTLDVAFDGADEVDAELNCIKGGGACLLQEKLVAIAAKKFVVVADYRKLSNNLLTQWKTI 149
Query: 134 PIEIDQFGVNKTLSALKEVASCFGL-NEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDP- 191
PIE+ L+ L + S L + +G V+D G +I+DA F +
Sbjct: 150 PIEVLPMAAPDVLNQLVALGSTGPLVRPGVP---GKAGEVVTDNGMWIIDAPFAPLKLLS 206
Query: 192 ---------------QIISGELCNIPGVIEHGLFINM----------------VDCAIIG 220
+ ++ E+ IPGV+E G+F + A G
Sbjct: 207 EGAGAERAADGSWGVKALADEIVKIPGVVEVGIFFGLDGSEAAKAGKSGLAQKPVAAYFG 266
Query: 221 TSDGECLVLQ 230
DG V
Sbjct: 267 MEDGSVKVTN 276
>gi|302498055|ref|XP_003011026.1| hypothetical protein ARB_02758 [Arthroderma benhamiae CBS 112371]
gi|291174573|gb|EFE30386.1| hypothetical protein ARB_02758 [Arthroderma benhamiae CBS 112371]
Length = 269
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 94/255 (36%), Gaps = 44/255 (17%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+G+T + + + +P+ + + + + +
Sbjct: 19 HYPKDAKFIGIGSGTTIVYVVEAIKALGIDTSATSFVPTGYQSNQLIVNAGLTAIAFDAL 78
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+D + DG DE+D L IKG G L +EK++A A FI + D K L
Sbjct: 79 PEGTVLDAAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKEFICVADWRKNQSRLLTSW 138
Query: 133 L--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGF 187
PIE+ + + LK + LR++ +G +D G IVDA F
Sbjct: 139 PSIPIEVAPLAARRVMDELK-----VLGSPNPILRQDPVGKAGPLKTDQGFLIVDAPFPA 193
Query: 188 IPDP----------------QIISGELCNIPGVIEHGLFIN---------------MVDC 216
+ P + ++ + I GV+E GLF
Sbjct: 194 LLLPSDITAGKKAEGGVWEVEALANAINAITGVLEVGLFCGPNGPQAQANGRVGGQKPVA 253
Query: 217 AIIGTSDGECLVLQK 231
A G +DG + +K
Sbjct: 254 AYFGNTDGTVISKRK 268
>gi|224979635|gb|ACN72757.1| ribose 5-phosphate isomerase A [Paralichthys olivaceus]
Length = 158
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTEN 60
A + KR AA A+ +V + +G+G+GST + LA+++ + +P+S
Sbjct: 8 AEEAKRLAAHAAVNNHVQNNQVVGVGSGSTIVYAVDRLAERVRQEKLNIVCVPTSFQARQ 67
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H + L + +D++IDG DE+D+ L IKG GG L +EKI+A A F+VI D
Sbjct: 68 LILQHGLTLSDLDRHPELDVAIDGADEVDADLTSIKGGGGCLTQEKIVAGCAKHFVVIAD 127
Query: 121 ESKRVD---FLGRGMLPIEIDQFGVNKTLS 147
K + + +P+E+
Sbjct: 128 YRKDSEALGQQWKKGVPVEVIPMAYVPVSR 157
>gi|213584199|ref|ZP_03366025.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 128
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 94 LIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVA 153
+IKG G AL REKIIA A +FI I D SK+VD LG+ LP+E+ +
Sbjct: 1 MIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQ----L 56
Query: 154 SCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM 213
G E R V+D GN I+D + I DP + + IPGV+ GLF N
Sbjct: 57 VKLGGRPEYRQN------VVTDNGNVILDVYGMEILDPIALENAINAIPGVVTVGLFANR 110
Query: 214 -VDCAIIGTSDGECLVLQ 230
D A+IGT DG +++
Sbjct: 111 GADVALIGTPDGVKTIVK 128
>gi|315053165|ref|XP_003175956.1| ribose-5-phosphate isomerase [Arthroderma gypseum CBS 118893]
gi|311337802|gb|EFQ97004.1| ribose-5-phosphate isomerase [Arthroderma gypseum CBS 118893]
Length = 269
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 93/251 (37%), Gaps = 44/251 (17%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+G+T + + + +P+ + + + + +
Sbjct: 19 HYPKDAKFIGIGSGTTIVYVVEAIKALGIDTSATSYVPTGYQSNQLIVNAGLTAIAFDAL 78
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+D + DG DE+D L IKG G L +EK++A A FI + D K L
Sbjct: 79 PEGTVLDAAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKEFICVADWRKNQSRLLTSW 138
Query: 133 L--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGF 187
PIE+ + ++ LK + LR+N +G +D +IVDA F
Sbjct: 139 PSIPIEVAPLAARRVMAELK-----VLGSPNPVLRQNPAEKAGPLKTDQAFFIVDAPFPA 193
Query: 188 IPDP----------------QIISGELCNIPGVIEHGLFIN---------------MVDC 216
+ P + ++ + I GV+E GLF
Sbjct: 194 LLLPSDIAAGKKAEGGVWEVEALANAINAITGVLEVGLFCGPNGSQAQANGRVGGQKPVA 253
Query: 217 AIIGTSDGECL 227
A G +DG +
Sbjct: 254 AYFGNTDGTVI 264
>gi|317131767|ref|YP_004091081.1| ribose 5-phosphate isomerase [Ethanoligenens harbinense YUAN-3]
gi|315469746|gb|ADU26350.1| ribose 5-phosphate isomerase [Ethanoligenens harbinense YUAN-3]
Length = 220
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 34/237 (14%)
Query: 6 MKRNAARRAIQYVVD------------GMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
MK+ A A + V D + +G+ +A G V+V+
Sbjct: 1 MKQKCAEEAFKLVKDGTVIGLGGGGTVSILVGL------------IAQ---AGLSVRVVT 45
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAAS 113
S T C H +P+ V ++D++ DG DE+D L +K GG EKI+A A+
Sbjct: 46 PSTRTAALCAEHGLPVLPTWTVDAIDIAFDGCDELDGSLNALKSCGGIHTNEKIVASLAN 105
Query: 114 RFIVIGDESKRVDFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL 171
++++ DESK V P+ E+ ++ FG R+ G
Sbjct: 106 EYVLLADESK-VFAALPFTHPVVLEVIPEAKALV----EKRVQAFGGAAAYRVSGAKDGF 160
Query: 172 FVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
V+D GNY++D D L +IPGV++ LF + A++ G +
Sbjct: 161 TVTDHGNYLLDMQIAPPDDLAAFHEALLHIPGVVDTSLFYRVAARALVAGPGGVRQL 217
>gi|146305032|ref|YP_001192348.1| ribose-5-phosphate isomerase [Metallosphaera sedula DSM 5348]
gi|145703282|gb|ABP96424.1| ribose-5-phosphate isomerase [Metallosphaera sedula DSM 5348]
Length = 227
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 11/229 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A + + + +G+GTG T ++ + ++A + + R+ ++ SS +T+
Sbjct: 5 KEVLAHYILPILANKRVIGLGTGKTVRKLVEVMALQGSLQGRI-LVTSSTDTDLLASSKG 63
Query: 67 IPLHSPEDVSSVDLSIDGFD---EIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ SP ++ +DGFD E R LIKG G ALLREKI++ + I IG+ SK
Sbjct: 64 ALVLSPFSGVIPEIYVDGFDFLVESQGRKVLIKGGGAALLREKILSFFSKERIFIGETSK 123
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
V +P+E+ G + L L E GL R G V+D GN I+D
Sbjct: 124 FVSR-REIQVPVEVVPAGFSLILVRLNE----MGLKPVPREGSGKMGPVVTDNGNLILDI 178
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQK 231
+ D EL IPGV+E G+F N+ D +IG S+G V Q+
Sbjct: 179 SVM-VEDLCKWERELKTIPGVVETGIFCENLYDSIVIGDSEGRIQVFQR 226
>gi|241706880|ref|XP_002413289.1| ribose-5-phosphate isomerase, putative [Ixodes scapularis]
gi|215507103|gb|EEC16597.1| ribose-5-phosphate isomerase, putative [Ixodes scapularis]
Length = 172
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG-FRVQVIPSSRN 57
MD + K AA+RA+ ++ + +G+G+GST + LA +I +++ +P+S
Sbjct: 1 MDLVEKAKEAAAQRAVDNHIKNNFVVGIGSGSTVVYAVEHLARRIKENDWKISCVPTSFQ 60
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ + +++ + E+ +D++IDG DE+D++L LIKG GG L +EK+IA A FIV
Sbjct: 61 AKELIRKYNLVMTDLEESPDLDVAIDGADEVDAKLTLIKGGGGCLTQEKVIASCAKHFIV 120
Query: 118 IGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNG 168
+ D K + +P+E+ +++ G ELR
Sbjct: 121 VADYRKDSSNLGENWKKGIPVEVIPMAYVPVQKKIEK---LLGNKAELRQAAKK 171
>gi|326514676|dbj|BAJ96325.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 182
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
K IP+ + D + + LSIDG DE+D L L+KG GG+LLREK+I A +RF+VI DE
Sbjct: 3 HKGQRIPMLALADAAEIHLSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGARFVVIVDE 62
Query: 122 SKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNGSG-----LFVS 174
SK V G +P+E+ FG TL +++V G + LR ++ +G LF++
Sbjct: 63 SKLVPRLGCTGAVPVEVVPFGSVYTLGLIRKVFDKLPGFHARLRTVKSKAGDHQEDLFLT 122
Query: 175 DGGNYIVDAFFGF-IP-DPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D GNYIV+ FF I + + IS L I GV+EHG+F+ M I+ DG VL +
Sbjct: 123 DNGNYIVEMFFDDGIHGNLRDISDSLLRITGVVEHGMFLGMATKVIVAKKDGTVAVLSR 181
>gi|327293036|ref|XP_003231215.1| ribose 5-phosphate isomerase [Trichophyton rubrum CBS 118892]
gi|326466634|gb|EGD92087.1| ribose 5-phosphate isomerase [Trichophyton rubrum CBS 118892]
Length = 269
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 92/255 (36%), Gaps = 44/255 (17%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y +G+G+G+T + + +P+ + + + + +
Sbjct: 19 HYPKYAKFIGIGSGTTIVYVVEAIKALGIETSATSFVPTGYQSNQLIVNAGLTAIAFDAL 78
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+D + DG DE+D L IKG G L +EK++A A FI + D K L
Sbjct: 79 PEGTILDAAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKEFICVADWRKNQSRLLTSW 138
Query: 133 L--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGF 187
PIE+ + + LK + LR++ +G +D G IVDA F
Sbjct: 139 PSIPIEVAPLAARRVMDELK-----VLGSPNPVLRQDPVAKAGPLKTDQGFLIVDAPFPA 193
Query: 188 IPDP----------------QIISGELCNIPGVIEHGLFIN---------------MVDC 216
+ P + ++ + I GV+E GLF
Sbjct: 194 LLLPSDIAAGKKAEGGVWEVEALANAINAITGVLEVGLFCGPNGPQAQTNGRAGGQKPVA 253
Query: 217 AIIGTSDGECLVLQK 231
A G +DG + +K
Sbjct: 254 AYFGNTDGTVISKRK 268
>gi|85109284|ref|XP_962842.1| hypothetical protein NCU07608 [Neurospora crassa OR74A]
gi|28924481|gb|EAA33606.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 283
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 40/262 (15%)
Query: 4 LQMKRNAARRAI-QYVVDGMT-LGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTEN 60
+ K AA RA+ +++ +G+G+GST + +++ + P+ + +
Sbjct: 15 EKSKFLAANRAVTEHLSPTYRHIGIGSGSTVIHVVDVISKLGTTITGPMTFYPTGDQSRD 74
Query: 61 FCKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+ L D+S +D+ DG DE+D L LIKG G LL+EK++A AA +F+
Sbjct: 75 LIQAAGFRLGYLSDLSPGHALDVCFDGADEVDPALNLIKGGGACLLQEKLVATAARKFVC 134
Query: 118 IGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGSGLFV 173
+ D K + + +PIE+ V + L L+ + L+ ++R +G V
Sbjct: 135 VADSRKISNHLGTQWKKGIPIEVFPMAVPQVLGELERLGR---LSAQVRSGLPGKAGACV 191
Query: 174 SDGGNYIVDAFFGFI--PDPQ-------------IISGELCNIPGVIEHGLFIN------ 212
+D G IVDA F + P+ ++ L IPGV EHGLF
Sbjct: 192 TDNGLRIVDAVFKPLLTELPEGKQEGEEGVWTVDGLARRLIEIPGVAEHGLFYGKSGLEV 251
Query: 213 ------MVDCAIIGTSDGECLV 228
A G DG +V
Sbjct: 252 ESGGAQKPVAAYFGMEDGSVMV 273
>gi|326471613|gb|EGD95622.1| ribose 5-phosphate isomerase [Trichophyton tonsurans CBS 112818]
Length = 269
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 93/255 (36%), Gaps = 44/255 (17%)
Query: 16 QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDV 75
Y D +G+G+G+T + + + +P+ + + + + +
Sbjct: 19 HYPKDAKFIGIGSGTTIVYVVEAIKALGIDTSATSFVPTGYQSNQLIVNAGLTAIAFDAL 78
Query: 76 SS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM 132
+D + DG DE+D L IKG G L +EK++A A FI + D K L
Sbjct: 79 PEGTVLDAAFDGADEVDDDLNCIKGGGACLFQEKLVALQAKEFICVADWRKNQSRLLTSW 138
Query: 133 L--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGF 187
PIE+ + + LK + LR++ +G +D IVDA F
Sbjct: 139 PSIPIEVAPLAARRVMDELK-----VLGSPNPVLRQDPVGKAGPLKTDQAFLIVDAPFPA 193
Query: 188 IPDP----------------QIISGELCNIPGVIEHGLFIN---------------MVDC 216
+ P + ++ + I GV+E GLF
Sbjct: 194 LLLPSDIAAGKKAGGGVWEVEALANAINAITGVLEVGLFCGPNGPQAQANGRVGGQKPVA 253
Query: 217 AIIGTSDGECLVLQK 231
A G +DG + +K
Sbjct: 254 AYFGNTDGTVISKRK 268
>gi|330835887|ref|YP_004410615.1| ribose-5-phosphate isomerase [Metallosphaera cuprina Ar-4]
gi|329568026|gb|AEB96131.1| ribose-5-phosphate isomerase [Metallosphaera cuprina Ar-4]
Length = 243
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--ADKIANGFRVQVIPSSRNTENFCKI 64
K+ A + + D +G+GTG T ++ + +L A+ + N +I SS +T+
Sbjct: 5 KKALAEYVLPMLRDKKIIGLGTGKTVRKLVEVLQNANLLHNKI---IITSSVDTDLLVSR 61
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEI---DSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
+ + SP + ++ ID FD L+KG GGALLREKI++ ++ I IG++
Sbjct: 62 YTQNVLSPLTGAIPEIYIDSFDFFLNSGDEKILVKGGGGALLREKILSFFSTERIFIGEK 121
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
SK + ++PIEI F ++ +S L+ GLN LR G V+D GN +V
Sbjct: 122 SKVISK-RDVLVPIEIAPFALSFVVSKLRSS----GLNPTLRESNGKMGPIVTDNGNVLV 176
Query: 182 DAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVDCAIIGTSDGECLVLQK 231
D + + E+ +IPGVIE G+F + D +I G + Q+
Sbjct: 177 DVSVET-SNLCALEREIKSIPGVIETGIFCEKLYDMIVIADEGGTIEIFQR 226
>gi|218671123|ref|ZP_03520794.1| ribose-5-phosphate isomerase A [Rhizobium etli GR56]
Length = 121
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/117 (52%), Positives = 81/117 (69%)
Query: 112 ASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL 171
+ R IVI DESK VD LG LPIE++ FG+ T A+++VA+ GL+ EL LR++G G
Sbjct: 1 SERMIVIADESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLSGELSLRQSGDGE 60
Query: 172 FVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
F +DGG++I+DA FG IPD + +S EL +IPGV+EHGLFINM AII G +
Sbjct: 61 FTTDGGHHIIDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTL 117
>gi|15897858|ref|NP_342463.1| ribose 5-phosphate isomerase (rpiA) [Sulfolobus solfataricus P2]
gi|284175667|ref|ZP_06389636.1| ribose 5-phosphate isomerase (rpiA) [Sulfolobus solfataricus 98/2]
gi|13814163|gb|AAK41253.1| Ribose 5-phosphate isomerase (rpiA) [Sulfolobus solfataricus P2]
gi|261602566|gb|ACX92169.1| ribose 5-phosphate isomerase [Sulfolobus solfataricus 98/2]
Length = 227
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 10/231 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD K A + Y+ +G+GTG T K+ + +L+ + + SS +TE
Sbjct: 1 MDP---KELLATYTLNYLRGKKIIGVGTGKTVKKLIEVLSSEENLKESSLFVASSIDTEI 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ S ++ +D FD + +IKG GGALLREK++A+ + I IG+
Sbjct: 58 ELSKRGFKVLSLFSAIQPEIYVDSFDIVTKDGIMIKGGGGALLREKLLAYFSKYRIFIGE 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K D +PIE+ GV+ K G ++R G +SD GN I
Sbjct: 118 STKLKDT-KVIDIPIEVISVGVSYV----KYKLEKMGFTVKIREGSGKMGPIISDNGNVI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVLQ 230
+D + + NIP ++E G+F + + I+ G +
Sbjct: 173 LDVSVKT-ENLCEFDRMIKNIPSIVETGIFCKELYNKIILANEQGRIEEMD 222
>gi|227830204|ref|YP_002831984.1| ribose 5-phosphate isomerase [Sulfolobus islandicus L.S.2.15]
gi|229579019|ref|YP_002837417.1| ribose 5-phosphate isomerase [Sulfolobus islandicus Y.G.57.14]
gi|284997626|ref|YP_003419393.1| ribose 5-phosphate isomerase [Sulfolobus islandicus L.D.8.5]
gi|227456652|gb|ACP35339.1| ribose 5-phosphate isomerase [Sulfolobus islandicus L.S.2.15]
gi|228009733|gb|ACP45495.1| ribose 5-phosphate isomerase [Sulfolobus islandicus Y.G.57.14]
gi|284445521|gb|ADB87023.1| ribose 5-phosphate isomerase [Sulfolobus islandicus L.D.8.5]
Length = 227
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K A + Y+ + +G+GTG T K+ + +L+ + V + SS +TE
Sbjct: 1 MNPKELLATYTLNYLREKKIIGVGTGKTVKKLIEVLSKEENLKETVLFVASSLDTEIELS 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H + S ++ +D FD + +IKG GGALLREK++ + + I IG+ +K
Sbjct: 61 KHGFKVISLLSAIQPEIYVDSFDVVTKDGIMIKGGGGALLREKLLTYFSKYRIFIGEFNK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
D +PIE+ GV+ K+ G ++R G +SD GN I+D
Sbjct: 121 LKD-SKLIDVPIEVVSVGVSYV----KDKLEKMGFAVKIREGSGKMGPIISDNGNAILDV 175
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVL 229
+ + IP V+E G+F + + I+ +G +
Sbjct: 176 SVKT-ENLCEFDRMIKTIPSVVETGIFCKELYNKIILANEEGRIEEM 221
>gi|227827517|ref|YP_002829297.1| ribose 5-phosphate isomerase [Sulfolobus islandicus M.14.25]
gi|229584720|ref|YP_002843222.1| ribose 5-phosphate isomerase [Sulfolobus islandicus M.16.27]
gi|238619674|ref|YP_002914500.1| ribose 5-phosphate isomerase [Sulfolobus islandicus M.16.4]
gi|227459313|gb|ACP37999.1| ribose 5-phosphate isomerase [Sulfolobus islandicus M.14.25]
gi|228019770|gb|ACP55177.1| ribose 5-phosphate isomerase [Sulfolobus islandicus M.16.27]
gi|238380744|gb|ACR41832.1| ribose 5-phosphate isomerase [Sulfolobus islandicus M.16.4]
gi|323477300|gb|ADX82538.1| ribose 5-phosphate isomerase [Sulfolobus islandicus HVE10/4]
Length = 227
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 10/230 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD K A + Y+ + +G+GTG T K+ + +L+ + V + SS +TE
Sbjct: 1 MDP---KELLATYTLNYLREKKIIGVGTGKTVKKLIEVLSKEENLKETVLFVASSLDTEI 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H + S ++ +D FD + +IKG GGALLREK++ + + I IG+
Sbjct: 58 ELSKHGFKVISLLSAIQPEIYVDSFDVVTKDGIMIKGGGGALLREKLLTYFSKYRIFIGE 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K D +PIE+ GV+ K+ G ++R G +SD GN I
Sbjct: 118 FNKLKD-SKLIDVPIEVVSVGVSYV----KDKLEKMGFAVKIREGSGKMGPIISDNGNAI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVL 229
+D + + IP V+E G+F + + I+ +G +
Sbjct: 173 LDVSVKT-ENLCEFDRMIKTIPSVVETGIFCKELYNKIILANEEGRIEEM 221
>gi|229582230|ref|YP_002840629.1| ribose 5-phosphate isomerase [Sulfolobus islandicus Y.N.15.51]
gi|228012946|gb|ACP48707.1| ribose 5-phosphate isomerase [Sulfolobus islandicus Y.N.15.51]
Length = 227
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K A + Y+ + +G+GTG T K+ + +L+ + V ++ SS +TE
Sbjct: 1 MNPKELLATYTLNYLREKKIIGVGTGKTVKKLIEVLSKEENLKETVLLVASSLDTEIELS 60
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
H + S ++ +D FD + +IKG GGALLREK++ + + I IG+ +K
Sbjct: 61 KHGFKVISLLSAIQPEIYVDSFDVVTKDGIMIKGGGGALLREKLLTYFSKYRIFIGEFNK 120
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
D +PIE+ GV+ K+ G ++R G +SD GN I+D
Sbjct: 121 LKD-SKLIDVPIEVVSVGVSYV----KDKLEKMGFAVKIREGSGKMGPIISDNGNAILDV 175
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVL 229
+ + IP V+E G+F + + I+ +G +
Sbjct: 176 SVKT-ENLCEFDRMIKTIPSVVETGIFCKELYNKIILANEEGRIEEM 221
>gi|296422303|ref|XP_002840701.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636922|emb|CAZ84892.1| unnamed protein product [Tuber melanosporum]
Length = 862
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 3 ALQMKRNAARRAIQ--YVVDGMTLGMGTGSTAKEFMILLADKIANGFR-VQVIPSSRNTE 59
KR AA RA+ + +G+G+GST + + + + IP+ ++
Sbjct: 8 VESAKRQAAYRAVDEHFPQHARFVGIGSGSTVIYVVERIVHLGRDVTDSITFIPTGYQSK 67
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ L S + + +D++ DG DE+D L IKG G L +EK++A A +F+V+
Sbjct: 68 ELIINGGLKLGSIDRHTELDIAFDGADEVDPYLNCIKGGGACLFQEKLVAICAKKFVVVA 127
Query: 120 DESKRVDFLGRGM---LPIEIDQFGVNKTLSALKEVASCFGLNEELRL-RRNGSGLFVSD 175
D K L +PIE+ LS L + +N +R+ + +G ++D
Sbjct: 128 DYRKLSPSLSTHYAPGIPIEVVPPAATHILSRL---ITLGAVNPAIRMGGTSKAGPCITD 184
Query: 176 GGNYIVDAFFGF 187
N+I+DA F
Sbjct: 185 NSNFIIDAPFPD 196
Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 192 QIISGELCNIPGVIEHGLFIN---MVDCAIIGTSDGECLVL 229
+ ++ L +I GV+EHG+F N A G DG
Sbjct: 262 EELARALKSIVGVVEHGIFWNGDRKPVVAYFGMEDGRVETR 302
>gi|317497567|ref|ZP_07955885.1| ribose 5-phosphate isomerase A [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895126|gb|EFV17290.1| ribose 5-phosphate isomerase A [Lachnospiraceae bacterium
5_1_63FAA]
Length = 205
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MKR A+ A+ V D +G+G G T + + V+V+ S +T CK
Sbjct: 1 MKRLCAKAALDLVPDHGIIGLGGGETISYLAEYIKEARKG---VKVVTPSDHTAQVCKKL 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+ + ++V ++++ DG D++DS L K GG EK+IA A ++++ DE+K
Sbjct: 58 GLEIVDTKEVKEIEIAFDGCDQVDSDLDAYKSGGGIHTLEKVIAKMAKEYVLLVDETKVT 117
Query: 126 DFLGRGMLPI-EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
D L + + +I VN S ++ + + +E ++++ +
Sbjct: 118 DKLNNKVPVVLDIIPEAVNYVTSQVEAMGATVKKRDE-----------------HLLEVY 160
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
+ +P+ + I L I GVIE LF + A++ +G ++
Sbjct: 161 YDTLPELEEIDKNLKMITGVIETSLFYQVATKALVAGEEGIRVI 204
>gi|323474568|gb|ADX85174.1| ribose 5-phosphate isomerase [Sulfolobus islandicus REY15A]
Length = 227
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 10/230 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD K A + Y+ + +G+GTG T K+ + +L+ + V + SS +TE
Sbjct: 1 MDP---KELLATYTLNYLREKKIIGVGTGKTVKKLIEVLSKEENLKETVLFVASSLDTEI 57
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
H + S ++ +D FD + +IKG GGALLREK++ + + I IG+
Sbjct: 58 ELSKHGFKVISLLSAIQPEIYVDSFDVVTKDGIMIKGGGGALLREKLLTYFSKYRIFIGE 117
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+K D +PIE+ GV+ K+ G ++R G +SD GN I
Sbjct: 118 FNKLKD-SKLIDVPIEVVSVGVSYV----KDKLEKMGFAVKIREGSGKMGPIISDNGNAI 172
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFIN-MVDCAIIGTSDGECLVL 229
+D + + IP V+E G+F + + I+ G +
Sbjct: 173 LDVSVKT-ENLCEFDRMIKTIPSVVETGIFCKELYNKIILANEKGRIEEM 221
>gi|14600875|ref|NP_147400.1| ribose 5-phosphate isomerase [Aeropyrum pernix K1]
gi|6831641|sp|Q9YEA9|RPIA_AERPE RecName: Full=Ribose-5-phosphate isomerase A; AltName:
Full=Phosphoriboisomerase A; Short=PRI
gi|5104322|dbj|BAA79637.1| ribose 5-phosphate isomerase [Aeropyrum pernix K1]
Length = 237
Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 28 TGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDE 87
TG T F+ + + +PSS T + P V++ +DG DE
Sbjct: 32 TGRTVMRFLREASARGVE--PGVAVPSSFETAVELAGLGWSVGDPRVYRGVNVYVDGADE 89
Query: 88 IDS-RLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKT 145
+ R ++KG GGALL EKI++ + I I E + V + +P+E++ V+
Sbjct: 90 AEPGRGYMVKGGGGALLGEKILSSRSKLNIFIVGEDRLVGRLGEKTPVPVEVEPGFVSMV 149
Query: 146 LSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVI 205
L++L+E GLN +R G VSD G IVD G + DP+ + L N+PGV
Sbjct: 150 LASLEE----LGLNPRVRTSPGKRGPVVSDWGGVIVDLLTGPLEDPRGLESMLRNVPGVR 205
Query: 206 EHGLFINMVDCAIIGTSDGECLVL 229
E GLF+ + D ++G S VL
Sbjct: 206 ETGLFLGLADYIVVGLSSCGYRVL 229
>gi|167765665|ref|ZP_02437718.1| hypothetical protein CLOSS21_00153 [Clostridium sp. SS2/1]
gi|167712640|gb|EDS23219.1| hypothetical protein CLOSS21_00153 [Clostridium sp. SS2/1]
Length = 205
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR-VQVIPSSRNTENFCKI 64
MKR A+ A+ V D +G+G G T + LA+ I + V+V+ S +T CK
Sbjct: 1 MKRLCAKAALDLVPDHGIIGLGGGET----ISYLAEDIKEARKAVKVVTPSDHTAQVCKK 56
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ + ++V ++++ DG D++DS L K GG EKIIA A ++++ DE+K
Sbjct: 57 LGLEIVDTKEVKEIEIAFDGCDQVDSDLDAYKSGGGIHTLEKIIAKMAKEYVLLVDETKV 116
Query: 125 VDFLGRGMLPI-EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
D L + + +I VN S ++ + + +E ++++
Sbjct: 117 TDKLNNKVPVVLDIIPEAVNYVTSQVEAMGATVKKRDE-----------------HLLEV 159
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
++ +P+ + I L I GVIE LF + A++ +G ++
Sbjct: 160 YYDTLPELEEIDKNLKMITGVIETSLFYQVATKALVAGEEGIRVI 204
>gi|225444205|ref|XP_002270834.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296089229|emb|CBI39001.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 22/238 (9%)
Query: 9 NAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIH 65
AA+ + Y+ GM +G+G+G + + L ++ G + IP S + +
Sbjct: 52 QAAKHTVDTYIKSGMVIGLGSGHASDMAIQYLGRQLRTGALKDITGIPMSVASASEAAKV 111
Query: 66 HIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKG-----YGGALLREKIIAHAASRFIVIG 119
IPL +D S +D + D D I + L I G ++++EK I AA + + I
Sbjct: 112 GIPLGHYQDCSQIDFAFDDADVIEEGTLVAIIGRRRLQGNESIIQEKSILKAADKLVFII 171
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSGL 171
E K+ G++P+ + +T + + F + E+ R G
Sbjct: 172 QE-KQYKCDLEGLIPVLVQSLNWMETAEEIDD---LFLGDAEVWRRPSIGHAGPLGGDFP 227
Query: 172 FVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
V+ G+ I+D F I ++ L I GV+EHG+ + A+I + G V
Sbjct: 228 LVTSEGHNILDVIFTSPILKLAEVAESLDKIDGVVEHGVISKIPCIAVITSDSGMYTV 285
>gi|125547700|gb|EAY93522.1| hypothetical protein OsI_15316 [Oryza sativa Indica Group]
Length = 174
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-F 127
+ + +DLSIDG DE+D L L+KG GG+LLREK+I + RF+VI DESK V
Sbjct: 1 MLPLGEAGGIDLSIDGADEVDPELNLVKGRGGSLLREKMIEGSGGRFVVIVDESKLVPRL 60
Query: 128 LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR-------NGSGLFVSDGGNYI 180
G +P+E+ FG + TL +++V RLR +FV+D GNYI
Sbjct: 61 GCTGAVPVEVVPFGCDHTLGLVRKVFDGLPGF-SARLRTVASKDGEGKEEMFVTDNGNYI 119
Query: 181 VDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
V+ FF G D IS L I GV+EHG+F+ M ++ DG +L K
Sbjct: 120 VEMFFEDGIRGDLNEISDRLLRITGVVEHGMFLGMATSVVVAKKDGTVALLHK 172
>gi|332708212|ref|ZP_08428202.1| ribose 5-phosphate isomerase [Lyngbya majuscula 3L]
gi|332353038|gb|EGJ32588.1| ribose 5-phosphate isomerase [Lyngbya majuscula 3L]
Length = 136
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 94 LIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEV 152
+IKG G A REKI+ A +FIV+ D +K V+ +LP+E+ + ++A+++
Sbjct: 1 MIKGGGAAHTREKIVDSLAKQFIVVVDSTKIVENLGSTFLLPVEVIPMAITPVMNAIQK- 59
Query: 153 ASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFIN 212
G ELR+ +G ++D GN +VD F I +P + + NIPGV+E+GLF+
Sbjct: 60 ---LGGKPELRMGVKKAGPVITDQGNMVVDVKFDAIDNPAELEKTINNIPGVLENGLFVG 116
Query: 213 MVDCAIIGT-SDGECLVLQ 230
+ D ++G DG+ ++ +
Sbjct: 117 VTDLVLVGEVKDGQTVIRE 135
>gi|281491151|ref|YP_003353131.1| ribose 5-phosphate isomerase A [Lactococcus lactis subsp. lactis
KF147]
gi|281374901|gb|ABX75739.2| Ribose 5-phosphate isomerase A [Lactococcus lactis subsp. lactis
KF147]
Length = 234
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 13/227 (5%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K N A AI + DG T+G+G G + L R+ + + T C+
Sbjct: 3 KENIANLAINLIKDGQTIGLGGGRNVSLIVKSLEKSSLKHIRIVTVSNETKT--LCEQMG 60
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+ L E+V +D + DG D I+ + + +K GG EK++A + ++++ + K D
Sbjct: 61 LNLVEFEEVDQIDWTFDGCDWINRKFQALKTRGGIQTEEKMLAQVSKHYVLLVTKDKLYD 120
Query: 127 FLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF 184
+ LPI EI + N + LR + + + GNY++D
Sbjct: 121 -PKKTELPICCEILPNSIKVIRKK------LLNYNADFNLRISNNMPIKTRHGNYLIDVQ 173
Query: 185 FGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ P+ IS L ++ G++ H F+N + + +D + K
Sbjct: 174 WKNSDIPEYISTVLDSLAGIVSHSFFLNEITEVL--YNDDNVKHIHK 218
>gi|70607063|ref|YP_255933.1| ribose 5-phosphate isomerase [Sulfolobus acidocaldarius DSM 639]
gi|68567711|gb|AAY80640.1| ribose 5-phosphate isomerase [Sulfolobus acidocaldarius DSM 639]
Length = 220
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81
+G+GTG T K+ + L D+ + + I SS +TE + S D+
Sbjct: 19 SIIGLGTGRTVKKLIEHL-DREGILNQFKYIASSIDTELEISQRGGLILSLYSGIQPDIY 77
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF-LGRGMLPIEIDQF 140
ID FD + ++KG G ALLREKI+ + + IG+ K V +P+EI
Sbjct: 78 IDSFDVVTKDKVMVKGGGAALLREKILTTFSKSSLFIGEYKKLVKIEQHSVKVPVEIVPV 137
Query: 141 GVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCN 200
+ L + E G +R G +SD GN I+D I + +
Sbjct: 138 SIMYILKKINE----IGFKTSIREGTGKMGGIISDNGNMIIDVE-VRINQLCEFDKTIKS 192
Query: 201 IPGVIEHGLFINMVDCAIIGTSDGECLVL 229
IPG+IE G+F N D + DG +L
Sbjct: 193 IPGIIETGVFCNKYDVVL-ADEDGRIEIL 220
>gi|226328281|ref|ZP_03803799.1| hypothetical protein PROPEN_02175 [Proteus penneri ATCC 35198]
gi|225203014|gb|EEG85368.1| hypothetical protein PROPEN_02175 [Proteus penneri ATCC 35198]
Length = 130
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 92 LRLIKGYGGALLREKIIAHAASR-FIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALK 150
+++IKG G AL REKIIA A + FI I DESK+VD LG+ LP+E+ +
Sbjct: 1 MQMIKGGGAALTREKIIAGVAKKTFICIVDESKQVDVLGKFPLPVEVIPMARSYVARE-- 58
Query: 151 EVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF 210
G E R V+D GN I+D I +P + ++ +IPGV+ GLF
Sbjct: 59 --LVKLGGLPEYREN------VVTDNGNVILDVHNLTILNPIELENKINSIPGVVTVGLF 110
Query: 211 INM-VDCAIIGTSDGECLV 228
N + ++GTS+G +
Sbjct: 111 ANRGANVVLMGTSEGVKTI 129
>gi|295692368|ref|YP_003600978.1| ribose-5-phosphate isomerase [Lactobacillus crispatus ST1]
gi|295030474|emb|CBL49953.1| Ribose-5-phosphate isomerase [Lactobacillus crispatus ST1]
Length = 227
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 9/219 (4%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A+ + MT+ +G GS + +A + + + S T C+ + L
Sbjct: 10 ALSKIKPKMTISLGGGSNVFKLAQAIAQ---HNLDITLYSPSELTRFRCQELGLELLPST 66
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF-LGRGM 132
+ +D++ DG D ID ++K GG L EK A A +FI++ + +
Sbjct: 67 AATKIDIAFDGCDSIDKNFNVLKSLGGIHLFEKQAAQIAKQFILLLPSERIQPILNPKIP 126
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ VN+ ++ S L ++R + + + GNY++D F +
Sbjct: 127 LCLEVAPPCVNQV----QKYLSSLHLTSKIRQDSSVAAFARTPLGNYLIDVFNEDWHNIT 182
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ +LC GV+ LF N+ +I DG+ + L++
Sbjct: 183 ELNRQLCLQNGVVSSSLFENLATS-LITEKDGKIIELKR 220
>gi|19074627|ref|NP_586133.1| RIBOSE 5-PHOSPHATE ISOMERASE [Encephalitozoon cuniculi GB-M1]
gi|19069269|emb|CAD25737.1| RIBOSE 5-PHOSPHATE ISOMERASE [Encephalitozoon cuniculi GB-M1]
Length = 201
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 18 VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
+ + +G+GTG+T + ++ L +PSS T + SP
Sbjct: 9 IANKTVIGIGTGTTVERYIDAL------HHDATYVPSSIRTALILSEKGFTVSSPLAHGV 62
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEI 137
+DL IDG D D +IKG GGAL EK++ A I+I K + +P+E
Sbjct: 63 LDLYIDGADYFDKNGNMIKGGGGALTTEKLLYSMAKETIIIVQSHKYRETFDGCFIPVEA 122
Query: 138 DQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGE 197
+L L GL LR G ++D GN IVD + +
Sbjct: 123 IP----TSLLKLISTLEGSGLKYCLRETDGKMGPLITDLGNCIVDVEYDDV-----FISS 173
Query: 198 LCNIPGVIEHGLFINMVDCAIIGTSDG 224
+I GV+EHGLF ++ + I+ DG
Sbjct: 174 CKSICGVVEHGLFESVGNTTIV-EEDG 199
>gi|293381875|ref|ZP_06627843.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 214-1]
gi|290921522|gb|EFD98556.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 214-1]
Length = 227
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 9/219 (4%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A+ + MT+ +G GS + +A + + + S T CK + L
Sbjct: 10 ALSKIKPKMTISLGGGSNVFKLAQAIAQ---HNLDITLYSPSELTRFRCKELGLELLPST 66
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF-LGRGM 132
+ +D++ DG D ID ++K GG L EK A A +FI++ + +
Sbjct: 67 AATKIDIAFDGCDSIDKNFNVLKSLGGIHLFEKQAAQIAKQFILLLPSQRIQPILNPKIP 126
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ VN+ ++ S L ++R + + + GNY++D F +
Sbjct: 127 LCLEVAPPCVNQV----QKYLSSLHLTSKIRQDSSVAAFARTPLGNYLIDVFNEDWHNIT 182
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ +LC GV+ LF N+ +I DGE + L++
Sbjct: 183 ELNRQLCLQNGVVSSSLFENLTTS-LITEKDGEIIELKR 220
>gi|227876989|ref|ZP_03995082.1| ribose 5-phosphate isomerase [Lactobacillus crispatus JV-V01]
gi|227863415|gb|EEJ70841.1| ribose 5-phosphate isomerase [Lactobacillus crispatus JV-V01]
Length = 227
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 9/219 (4%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A+ + MT+ +G GS + +A + + + S T CK + L
Sbjct: 10 ALSKIKPKMTISLGGGSNVFKLSQAIAQ---HNLDITLYSPSELTRFRCKELGLELLPST 66
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF-LGRGM 132
+ +D++ DG D ID ++K GG L EK A A +FI++ + +
Sbjct: 67 AATKIDIAFDGCDSIDKNFNVLKSLGGIHLFEKQAAQIAKQFILLLPSQRIQPILNPKIP 126
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ VN+ ++ S L ++R + + + GNY++D F +
Sbjct: 127 LCLEVAPPCVNQV----QKYLSSLHLTSKIRQDSSVAAFARTPLGNYLIDVFNEDWHNIT 182
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ +LC GV+ LF N+ +I DGE + L++
Sbjct: 183 ELNRQLCLQNGVVSSSLFENLTTS-LITEKDGEIIELKR 220
>gi|169611238|ref|XP_001799037.1| hypothetical protein SNOG_08729 [Phaeosphaeria nodorum SN15]
gi|111062777|gb|EAT83897.1| hypothetical protein SNOG_08729 [Phaeosphaeria nodorum SN15]
Length = 284
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 56/256 (21%)
Query: 24 LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK---IHHIPLHSPEDVSSVDL 80
+G+G+G+T + + ++ + + +P+ + + I S D +D+
Sbjct: 29 VGIGSGTTIVYVVEAIKER-STNPNILFVPTGYQSRQLVINAGLTPISFDSLPDHIMLDV 87
Query: 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGRGMLPIEID 138
+ DG DE+D+ L IKG G L +EK++A A +F+ + D KR D +PIE+
Sbjct: 88 AFDGADEVDAELNCIKGGGACLFQEKLVAERAKKFVCVADYRKRQDRLLTIWPTIPIEVA 147
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGFI------- 188
K ++ALK + LR SG +D YIVDA F +
Sbjct: 148 PLSQRKVVAALK-----LLGSPNPTLRTTLLEKSGPLKTDQDFYIVDAPFKTLLTAADVK 202
Query: 189 ------------PDPQIISGELCNIPGVIEHGLFINM----------------------- 213
+ + IS + + GV+E G+F +
Sbjct: 203 AGKGKGDGTDGTWEVKAISKAIKGLTGVLEVGIFAGLNGVEAQELRAQDKSVSAVMGGQK 262
Query: 214 VDCAIIGTSDGECLVL 229
G +DG +
Sbjct: 263 PIAVYFGMADGSVKLR 278
>gi|330930176|ref|XP_003302924.1| hypothetical protein PTT_14921 [Pyrenophora teres f. teres 0-1]
gi|311321391|gb|EFQ88960.1| hypothetical protein PTT_14921 [Pyrenophora teres f. teres 0-1]
Length = 284
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 50/253 (19%)
Query: 24 LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS---SVDL 80
+G+G+G+T + + ++ + + +P+ + + S + + +D+
Sbjct: 29 VGIGSGTTIVYVVEAIKER-STNPNILFVPTGFQSRQLVINAGLTAISFDSLPDRVMLDV 87
Query: 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGRGMLPIEID 138
+ DG DE+DS L IKG G L +EK++A A +F+ + D KR D +PIE+
Sbjct: 88 AFDGADEVDSELNCIKGGGACLFQEKLVAERAKKFVCVADYRKRQDRLLTNWPTIPIEVA 147
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS--- 195
K +ALK + S L SG +D YI+DA F + ++
Sbjct: 148 PLSQLKVAAALKMLGSTGPKLRTTLL--EKSGPLKTDQDFYILDAPFPPLLTSADVAAGK 205
Query: 196 ----------------GELCNIPGVIEHGLFINM-----------------------VDC 216
+ + GV+E G+F +
Sbjct: 206 GKGDGSDGTWEVNNISRAIKGLTGVLEVGIFAGLNGIEAQALRENDQSTKAVKGGQKPVA 265
Query: 217 AIIGTSDGECLVL 229
G DG V
Sbjct: 266 VYFGMQDGSIKVR 278
>gi|124027959|ref|YP_001013279.1| ribose-5-phosphate isomerase A [Hyperthermus butylicus DSM 5456]
gi|123978653|gb|ABM80934.1| ribose-5-phosphate isomerase A [Hyperthermus butylicus DSM 5456]
Length = 254
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 15/238 (6%)
Query: 1 MDALQMKRNAARRAIQ----YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPS 54
M AL K AARRA + + +G+GTGST + + L + A R +V S
Sbjct: 1 MTAL-AKVEAARRAAEILEPLIERAERIGIGTGSTVRLVLRFLIESPAASALRRAKVYAS 59
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEI---DSRLRLIKGYGGALLREKIIAHA 111
S +T + I + +D+ DG DE+ +KG G A+LREK++A
Sbjct: 60 SFDTLLELRRLGIEAYDFLPRDGLDVYFDGADEVARVSDMCMAVKGRGAAMLREKLLAFN 119
Query: 112 ASRFIVIGDESKRV-DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR-RNGS 169
++ +++ DESK + +G + V + + E G+ E+R
Sbjct: 120 SAYTLLVVDESKVSRNLGDKGKP---VPVEVVPPAVETIVEEFESRGIRAEVRTNCSCRD 176
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECL 227
G +D ++D + + P L +PGV+ HGLFI +D ++G DG
Sbjct: 177 GPAFTDNYGIVIDTWPWGVMSPIQYESLLDTLPGVMGHGLFIGYMDAIVVGYGDGRSE 234
>gi|189205643|ref|XP_001939156.1| ribose-5-phosphate isomerase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975249|gb|EDU41875.1| ribose-5-phosphate isomerase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 284
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 50/253 (19%)
Query: 24 LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS---SVDL 80
+G+G+G+T + + ++ + + +P+ + + S + + +D+
Sbjct: 29 VGIGSGTTIVYVVEAIKER-STNPNILFVPTGFQSRQLVINAGLTAISFDSLPDRVMLDV 87
Query: 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGRGMLPIEID 138
+ DG DE+DS L IKG G L +EK++A A +F+ + D KR D +PIE+
Sbjct: 88 AFDGADEVDSELNCIKGGGACLFQEKLVAERAKKFVCVADYRKRQDRLLTNWPTIPIEVA 147
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIIS--- 195
K +ALK + S L SG +D YI+DA F + ++
Sbjct: 148 PLSQLKVAAALKMLGSTGPKLRTTLL--EKSGPLKTDQDFYILDAPFPPLLTSADVAAGK 205
Query: 196 ----------------GELCNIPGVIEHGLFINM-----------------------VDC 216
+ + GV+E G+F +
Sbjct: 206 GKGDGSDGTWEVNNISRAIKGLTGVLEVGIFAGLNGIDAQALREKDQSTKAVKGGQKPVA 265
Query: 217 AIIGTSDGECLVL 229
G DG V
Sbjct: 266 VYFGMQDGSIKVR 278
>gi|115889643|ref|XP_798209.2| PREDICTED: similar to MGC83218 protein [Strongylocentrotus
purpuratus]
gi|115950035|ref|XP_001196137.1| PREDICTED: similar to MGC83218 protein [Strongylocentrotus
purpuratus]
Length = 156
Score = 124 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 100 GALLREKIIAHAASRFIVIGDESKRVD---FLGRGMLPIEIDQFGVNKTLSALKEVASCF 156
L +EKI+A A+ FIVI D K+ +PIE+ + ++ + F
Sbjct: 24 SCLTQEKIVAANANTFIVIADYRKQSSDLGINWTKGIPIEVIPMAYRPVIKTIQ---TKF 80
Query: 157 GLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPD-PQIISGELCNIPGVIEHGLFINMVD 215
G + ELR+ + +G V+D GN+I+D F P+ ++ EL IPGV++ GLFINM
Sbjct: 81 GGSPELRMAKAKAGPVVTDNGNFILDWKFDKNPEKWDTVNRELMMIPGVVDTGLFINMAK 140
Query: 216 CAIIGTSDGECLVLQ 230
A G +DG +
Sbjct: 141 RAYFGMADGSVQIQD 155
>gi|300702247|ref|XP_002995146.1| hypothetical protein NCER_102078 [Nosema ceranae BRL01]
gi|239603985|gb|EEQ81475.1| hypothetical protein NCER_102078 [Nosema ceranae BRL01]
Length = 201
Score = 124 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 15/195 (7%)
Query: 19 VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV 78
D T+G+GTG T + + L + SS T + E V +
Sbjct: 11 EDKHTIGIGTGRTVESILQYL------NPNSTYVSSSHQTSISLTNLSLKSVPIETVQRL 64
Query: 79 DLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
DL IDG D D +IKG GG+L EK++ A +++ + K +PIEI
Sbjct: 65 DLYIDGCDYFDREGNMIKGKGGSLTTEKLLCSMADEVVIVVQDYKYRKRFNNCYVPIEIL 124
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGEL 198
+++ ++ + G+ ELR +N G ++D GN+I+D + +
Sbjct: 125 P----QSIKYIENILIKNGIKYELRCSKNKFGPVITDLGNFIIDIVYD-----REFLIRS 175
Query: 199 CNIPGVIEHGLFINM 213
I GV+EHG F N
Sbjct: 176 KQICGVVEHGYFENK 190
>gi|301300233|ref|ZP_07206445.1| ribose 5-phosphate isomerase A [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852174|gb|EFK79846.1| ribose 5-phosphate isomerase A [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 225
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A + T+ +G GS K+ L+ ++V S T C+ ++ L
Sbjct: 8 AFNLLHPDTTISLGGGSNVKKLTHKLSQHPE--LNIKVCSPSEYTRQICRDLNLNLIDIT 65
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRGM 132
+ S+++ DG D ID L ++K GG EK A+ A ++I+I +
Sbjct: 66 EASTIEFGFDGCDAIDFDLNVLKSNGGIHTLEKEYAYKAEKYIIISPPERLKASLNPNVQ 125
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ V+ LS K+ GL ELRL + + GNY++D + G D +
Sbjct: 126 LCLEVVSPSVDSVLSVAKQ----LGLKAELRLGSAVASYARTPLGNYLIDCYCGSWQDIK 181
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+ L ++ GV+ F N+V + + + ++K
Sbjct: 182 KINSRLSSLNGVVSTSYFENIVHSVLTLDKNNNPIEIKK 220
>gi|224115580|ref|XP_002317071.1| predicted protein [Populus trichocarpa]
gi|222860136|gb|EEE97683.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/240 (20%), Positives = 100/240 (41%), Gaps = 22/240 (9%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHH 66
AA+ + ++ GM +G+G+G + + L + G + +P S + +
Sbjct: 50 AAKHTVDKHIQSGMVVGLGSGQASGLAIQYLGRLLRTGALKDIVGVPMSVTSASEAAKAG 109
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGY-----GGALLREKIIAHAASRFIVIGD 120
IPL +D S +D + D D I+ I G ++++EK I AA++ + +
Sbjct: 110 IPLDVYQDSSQIDFAFDDADIIEEETLVAIIGRQKSQSDESIIQEKSILKAANKLVFMIT 169
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR--------RNGSGLF 172
E++ V G +P+ + +T + + F + E+ R G F
Sbjct: 170 ENQYVG-GLEGSIPVLVQALNWMETAEEIDD---LFLGDAEVWRRSSIGQAGPTGGDYPF 225
Query: 173 VSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ G+ ++D F + ++ L + GV++HG+F +I G ++ +
Sbjct: 226 ITREGHNVLDVIFTSPVQSLAEVAESLDKVDGVVDHGVFSKFPCTVVIAAESGGLNIVDR 285
>gi|118489032|gb|ABK96323.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 285
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/240 (20%), Positives = 100/240 (41%), Gaps = 22/240 (9%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHH 66
AA+ + ++ GM +G+G+G + + L + G + +P S + +
Sbjct: 50 AAKHTVDKHIQSGMVVGLGSGQASGMAIQYLGRLLRTGALKDIVGVPMSVTSASEAAKAG 109
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGY-----GGALLREKIIAHAASRFIVIGD 120
IPL +D S +D + D D I+ I G ++++EK I AA++ + +
Sbjct: 110 IPLDVYQDSSQIDFAFDDADIIEEETLVAIIGRQKSQSDESIIQEKSILKAANKLVFMIT 169
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR--------RNGSGLF 172
E++ V G +P+ + +T + + F + E+ R G F
Sbjct: 170 ENQYVG-GLEGSIPVLVQALNWMETAEEIDD---LFLGDAEVWRRSSIGQAGPTGGDYPF 225
Query: 173 VSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ G+ ++D F + ++ L + GV++HG+F +I G ++ +
Sbjct: 226 ITREGHNVLDVIFTSPVQSLAEVAESLDKVDGVVDHGVFSKFPCTVVIAAESGGLNIVDR 285
>gi|312213962|emb|CBX93964.1| hypothetical protein [Leptosphaeria maculans]
Length = 284
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 97/256 (37%), Gaps = 56/256 (21%)
Query: 24 LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS---SVDL 80
+G+G+G+T + + ++ + +P+ + + + + + +D+
Sbjct: 29 VGIGSGTTIVYVVEAIKA-LSTNPNILFVPTGYQSRQLVIAAGLTPIAFDSLPPNQMLDV 87
Query: 81 SIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD--FLGRGMLPIEID 138
+ DG DE+D+ L IKG G L +EK++A A +F+ + D KR D +PIE+
Sbjct: 88 AFDGADEVDAELNCIKGGGACLFQEKLVAERAKKFVCVADYRKRQDRLLTKWPTIPIEVA 147
Query: 139 QFGVNKTLSALKEVASCFGLNEELRLRRN---GSGLFVSDGGNYIVDAFFGFIPDPQIIS 195
K +AL+E+ + + +LR SG +D +I+DA F + +
Sbjct: 148 PLAQVKVTAALREL-----GSTDPKLRTTLLEKSGPLKTDQDFFIIDAPFPTLLTAADVQ 202
Query: 196 -------------------GELCNIPGVIEHGLFINM----------------------- 213
+ + GV+E G+F +
Sbjct: 203 AGKGKGDGSDGSWEVNHICKAIKGLTGVLEVGIFAGLNGIEAQELRAREGGRGAVAGGQK 262
Query: 214 VDCAIIGTSDGECLVL 229
G +DG V
Sbjct: 263 PIAVYFGMADGSIKVR 278
>gi|238586276|ref|XP_002391121.1| hypothetical protein MPER_09493 [Moniliophthora perniciosa FA553]
gi|215455386|gb|EEB92051.1| hypothetical protein MPER_09493 [Moniliophthora perniciosa FA553]
Length = 157
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 88 IDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGM---LPIEIDQFGVNK 144
+D L IKG G LREK+IA AA F+++ D K V++LG +PIE+ F K
Sbjct: 1 VDVELNCIKGGGACHLREKVIAEAALTFVLVADYRKNVEYLGSTFKAGVPIEVVPFAYAK 60
Query: 145 TLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG--FIPDPQIISGELCNIP 202
L L V LR+ +G V+D GN+++DA F + DP I ++ +
Sbjct: 61 VLGNLHTVIGSP--KATLRMAVAKAGPVVTDNGNFVIDAPFDEDRMKDPYTIMAQIKMLT 118
Query: 203 GVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GV+E GLF +M A G DG V K
Sbjct: 119 GVVEVGLFCHMAQAAYFGNQDGSVTVKWK 147
>gi|90962410|ref|YP_536326.1| ribose 5-phosphate isomerase [Lactobacillus salivarius UCC118]
gi|90821604|gb|ABE00243.1| Ribose 5-phosphate isomerase [Lactobacillus salivarius UCC118]
Length = 225
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A + T+ +G GS K+ L+ ++V S T C+ ++ L
Sbjct: 8 AFNLLHPDTTISLGGGSNVKKLAHKLSQHPE--LNIKVCSPSEYTRQICRDLNLNLIDIT 65
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRGM 132
+ S+++ DG D ID L ++K GG EK A+ A ++I+I +
Sbjct: 66 EASTIEFGFDGCDAIDFDLNVLKSNGGIHTLEKEYAYKAEKYIIISPPERLKASLNPNVQ 125
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ V+ L A K+ GL ELRL + + GNY++D + D +
Sbjct: 126 LCLEVVFPSVDSVLFAAKQ----LGLKAELRLGSAVASYARTPLGNYLIDCYCESWQDIK 181
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+ +L ++ GV+ F N+V + + + ++K
Sbjct: 182 KINSKLSSLNGVVSTSYFENIVHSVLTLDKNNNPIEIKK 220
>gi|15241521|ref|NP_199265.1| ribose 5-phosphate isomerase-related [Arabidopsis thaliana]
gi|9758705|dbj|BAB09159.1| unnamed protein product [Arabidopsis thaliana]
gi|17529104|gb|AAL38762.1| unknown protein [Arabidopsis thaliana]
gi|21592743|gb|AAM64692.1| unknown [Arabidopsis thaliana]
gi|22136702|gb|AAM91670.1| unknown protein [Arabidopsis thaliana]
gi|62320666|dbj|BAD95333.1| hypothetical protein [Arabidopsis thaliana]
gi|332007736|gb|AED95119.1| ribose 5-phosphate isomerase A [Arabidopsis thaliana]
Length = 296
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 87/233 (37%), Gaps = 23/233 (9%)
Query: 9 NAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIH 65
AA + YV GM +G+G+G + + L ++ +G V +P S + + +
Sbjct: 42 RAAHHTVDNYVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKY 101
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGA------LLREKIIAHAASRFIVI 118
IPL D +D + D ++ + G + +L++K I A + +
Sbjct: 102 GIPLEYYRDGVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFM 161
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSG 170
E + G +P+ + + + + + E+ R G
Sbjct: 162 IKEEQY-KAGLEGSIPVLVQSLNWLAIAEEIDD---LYLGDAEVWRRASVENEGPLGGDF 217
Query: 171 LFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
V+ G+ I+D F I ++ L I GV++HGL I +I
Sbjct: 218 PIVTSDGHNILDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIAEE 270
>gi|258572866|ref|XP_002545195.1| ribose 5-phosphate isomerase A [Uncinocarpus reesii 1704]
gi|237905465|gb|EEP79866.1| ribose 5-phosphate isomerase A [Uncinocarpus reesii 1704]
Length = 262
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 91/270 (33%), Gaps = 67/270 (24%)
Query: 4 LQMKRNAARRAI--QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
KR AAR A+ Y +G+G+G+T + + + +P+ +
Sbjct: 5 EDAKRAAAREAVANHYPQSPKFVGIGSGTTIVYVVEAIKALGVDTSSTSFVPTGFQSNQL 64
Query: 62 CKIHHIPLHSPEDVSS---VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ + + + +D++ DG DE+D L IKG G
Sbjct: 65 IVNAGLTPVAFDALPEGAILDVAFDGADEVDDDLNCIKGGG------------------- 105
Query: 119 GDESKRVDFLGRGML--PIEIDQFGVNKTLSALKEVASCFGLNEELRLRR---NGSGLFV 173
K L PIE+ + ++ALK + + +LR G
Sbjct: 106 AYYRKLQSRLLTAWPSVPIEVAPLASRRVITALKAL-----GSPAPQLRHSLVQREGPIK 160
Query: 174 SDGGNYIVDAFFGFI------------------PDPQIISGELCNIPGVIEHGLFINMVD 215
+D +IVDA F + + + ++ E+ IPGV+E GLF +
Sbjct: 161 TDQSFFIVDAPFPQLLTASDIASGKADAATDAQWEVEALAREIKQIPGVLEVGLFCGLTG 220
Query: 216 ---------------CAIIGTSDGECLVLQ 230
A G +DG +
Sbjct: 221 PQAQAAGGVGGQKPIAAYFGMADGSVQSRK 250
>gi|326491403|dbj|BAJ94179.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 24/241 (9%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHH 66
AA+ + +V GM +G+G+G+ + + L ++ G + IPSS + +
Sbjct: 53 AAKLTVDEFVKSGMVVGLGSGAASGLAVQYLGTRLRRGSLTGIVGIPSSVICASEAEKAG 112
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRL-------IKGYGGALLREKIIAHAASRFIVIG 119
I + S E+ + +D + D I+ I+ + ++EK I +A + I
Sbjct: 113 IKVRSHEEGAQIDFAFTDADVIEEGTLAAVIGRGKIESGDPSFIQEKGIVKSADKVAFII 172
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSGL 171
D K V G +P+ + T + + F + E+ R G
Sbjct: 173 DNDKYVS-GIEGSIPVLVKSGNWIDTAEEIDD---LFLGDAEVWRRPSIGTAGPSGGDFP 228
Query: 172 FVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
V+ G++I+D F I D ++ L I GV++HG+ N A+I + GE VL
Sbjct: 229 LVTKEGHHILDVIFTTPIQDLGKVAEGLEKIVGVVDHGIICNTTPYAVIASK-GEVQVLD 287
Query: 231 K 231
+
Sbjct: 288 R 288
>gi|291386345|ref|XP_002709621.1| PREDICTED: pre-B lymphocyte gene 2-like [Oryctolagus cuniculus]
Length = 277
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 100 GALLREKIIAHAASRFIVIGDESKRVDF---LGRGMLPIEIDQFGVNKTLSALKEVASCF 156
G L +EKI+A AS FIVI D K +PIE+ A+ F
Sbjct: 143 GCLTQEKIVAGYASHFIVIADFRKDSKNLGYQRHKGIPIEVFPMAYVPVSRAV---TWKF 199
Query: 157 GLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDC 216
G +L++ + +G V+D GN+I+D F ++ + I V++ GLFINMV+
Sbjct: 200 GGEVQLQMAVHKAGPVVTDNGNFILDWKFDCAHKWSEVNIAIKMILSVVDTGLFINMVER 259
Query: 217 AIIGTSDGECLVLQK 231
G DG V +K
Sbjct: 260 VYFGMQDGSVTVREK 274
>gi|227891540|ref|ZP_04009345.1| ribose 5-phosphate isomerase [Lactobacillus salivarius ATCC 11741]
gi|227866687|gb|EEJ74108.1| ribose 5-phosphate isomerase [Lactobacillus salivarius ATCC 11741]
Length = 225
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A + T+ +G GS K+ L+ ++V S T C+ ++ L
Sbjct: 8 AFNLLHPDTTISLGGGSNVKKLAHKLSQHPE--LNIKVCSPSEYTRQICRDLNLNLIDIT 65
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRGM 132
+ S+++L DG D ID L ++K GG EK A+ A ++I+I +
Sbjct: 66 ETSTIELGFDGCDAIDFDLNVLKSNGGIHTLEKEYAYKAEKYIIISPPERLKASLNPNVQ 125
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ V+ LS K+ GL +LRL + + GNY++D + D +
Sbjct: 126 LCLEVVSPSVDSVLSTAKQ----LGLKAKLRLGSAVASYARTPLGNYLIDCYCESWQDIK 181
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+ L ++ GV+ F N+V + + + ++K
Sbjct: 182 KINSILSSLNGVVSTSYFENIVHSVLTLDKNNNPIEIKK 220
>gi|115455713|ref|NP_001051457.1| Os03g0781400 [Oryza sativa Japonica Group]
gi|108711390|gb|ABF99185.1| ribose 5-phosphate isomerase, putative, expressed [Oryza sativa
Japonica Group]
gi|113549928|dbj|BAF13371.1| Os03g0781400 [Oryza sativa Japonica Group]
gi|215701349|dbj|BAG92773.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625908|gb|EEE60040.1| hypothetical protein OsJ_12816 [Oryza sativa Japonica Group]
Length = 299
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 24/240 (10%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHH 66
AA+ + +V GM +G+G+G + + L ++ G + IPSS + +
Sbjct: 58 AAKLTVDRFVESGMVVGLGSGPASGLAIQYLGTRLRRGSLTGILGIPSSTISASEAVKAG 117
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRL-------IKGYGGALLREKIIAHAASRFIVIG 119
I + S E+ + +D + D I+ + + + EK I +A + I
Sbjct: 118 IQVSSYEEGTQIDFAFTDADIIEEDTMTAVIGRRKTESGEPSFMVEKGIVKSADKLAFII 177
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSGL 171
K V G +P+ + T + + F + E+ R G
Sbjct: 178 GHEKYVK-GIEGSIPVLVKSANWIDTAEEIDD---LFLGDAEVWRRPSIGTAGPLGGDFP 233
Query: 172 FVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
V+ G++++D F IPD ++ L I GV++HG+ ++ ++ +GE VL
Sbjct: 234 LVTKEGHHVLDVIFTTPIPDLGKVAESLEKIAGVVDHGIVSSIPSYVVVAL-NGEVQVLD 292
>gi|15921570|ref|NP_377239.1| ribose 5-phosphate isomerase [Sulfolobus tokodaii str. 7]
gi|15622356|dbj|BAB66348.1| 219aa long hypothetical ribose 5-phosphate isomerase [Sulfolobus
tokodaii str. 7]
Length = 219
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 10/229 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
MD K AR + + + +G+GTG T K+ + +L+++ ++ + SS +TE
Sbjct: 1 MDP---KEVVARFIVDKLKEHKLIGLGTGKTVKKLIEVLSEEGLLKEKI-FVASSIDTEL 56
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + + ID FD + S +IKG G ALLREK++ + + IG+
Sbjct: 57 EISKREGIVITLYSGLRPQVYIDSFDFVTSDKIMIKGGGAALLREKMLYTFSKEKVFIGE 116
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
E K D + +E+ GV +SALKE G ++R G +SD GN I
Sbjct: 117 ELKLKDLKEYSVP-VEVVPVGVAYVISALKER----GYEAKIREGNGKIGPIISDNGNII 171
Query: 181 VDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
+D + + IP +IE G+F + +G +L
Sbjct: 172 LDVIVKR-ENLCDFERLVKEIPAIIESGIFCKKDYEIYLANENGRISIL 219
>gi|300215034|gb|ADJ79450.1| Ribose 5-phosphate isomerase [Lactobacillus salivarius CECT 5713]
Length = 225
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A + +T+ +G GS K+ L+ ++V S T C ++ L
Sbjct: 8 AFNLLHPDITISLGGGSNVKKLAHKLSQHPE--LNIKVCSPSEYTRQICHDLNLNLIDIT 65
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV-DFLGRGM 132
+VS+++ DG D ID L ++K GG EK A+ A ++I+I +
Sbjct: 66 EVSTIEFGFDGCDAIDFDLNVLKSNGGIHTLEKEYAYKAEKYIIISPPERLKASLNPNVQ 125
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ VN LSA K+ GL ELR + + GNY++D + D +
Sbjct: 126 LCLEVVSPSVNSVLSAAKQ----LGLKAELRSASAVASYARAPLGNYLIDCYCESWQDIK 181
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
I+ L ++ GV+ F N+V + + + ++K
Sbjct: 182 KINNRLSSLNGVVSTSYFENIVHSVLTLDKNNNPIEIKK 220
>gi|323451139|gb|EGB07017.1| ribose 5-phosphate isomerase [Aureococcus anophagefferens]
Length = 223
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 21/224 (9%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
M LG+GTG T + + +ADK+ G V +P+S T + +P + +SVD
Sbjct: 1 MILGVGTGKTVELCLRRIADKLERGALKDVLCLPTSDATARLLETLKLPTLRHDSDASVD 60
Query: 80 LSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQ 139
L+I G D +D + ++KG GA+LREK++ AA ++V E K D PI +
Sbjct: 61 LAIGGCDAVDGQKHVLKGGKGAMLREKLLRDAAKAWVVCCAEGKVCD-AVGSTYPIPVAP 119
Query: 140 FGV-----------NKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFG-F 187
GV ++ L+ A+ G +G+ ++ +D GN IVD F
Sbjct: 120 VGVRARKLANLPSLQPAVARLRVGAAPAGFPGCAMPGDDGAAVYKTDNGNLIVDLFLEAP 179
Query: 188 IPDPQIISGELCNIPGVIEHGLFINMVD----CAIIGTSDGECL 227
+ D + + +L GV+EHGL D ++G +DG
Sbjct: 180 LRDVRRAADDLSRTAGVVEHGLLP--ADENPPIVVVGRADGTAT 221
>gi|256844698|ref|ZP_05550183.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 125-2-CHN]
gi|256613239|gb|EEU18443.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus 125-2-CHN]
Length = 210
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81
MT+ +G GS + +A + + + S T CK + L + +D++
Sbjct: 1 MTISLGGGSNVFKLAQAIAQ---HNLDITLYSPSELTRFRCKELGLELLPSTAATKIDIA 57
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF-LGRGMLPIEIDQF 140
DG D ID ++K GG L +K A A +FI++ + + L +E+
Sbjct: 58 FDGCDSIDKNFNVLKSLGGIHLFKKQAAQIAKQFILLLPSQRIQPILNPKIPLCLEVAPP 117
Query: 141 GVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCN 200
VN+ ++ S L ++R + + + GNY++D F + ++ +LC
Sbjct: 118 CVNQV----QKYLSSLHLTSKIRQDSSVAAFARTPLGNYLIDVFNEDWHNITELNRQLCL 173
Query: 201 IPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GV+ LF N+ +I DGE + L++
Sbjct: 174 QNGVVSSSLFENLTTS-LITEKDGEIIELKR 203
>gi|293401841|ref|ZP_06645982.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304793|gb|EFE46041.1| ribose 5-phosphate isomerase A [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 223
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTA------------KEFMILLADKIANGFRVQV 51
+ K A A+ ++ DGM +F+ V+V
Sbjct: 1 MNSKERTAFAALTFIKDGML---------IGLGGGTTIGTLAKFITE------KQLAVKV 45
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ S TE C +PL VS VD++ DG DEID L +K GG REK+IAH
Sbjct: 46 VTPSFETEKLCVRLGLPLLPLRMVSHVDVAFDGCDEIDRHLHALKSGGGIHTREKLIAHM 105
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGS 169
A +I++ E K D L R PI E+ + ++E+ F R
Sbjct: 106 ADEYILMATEDKLSDTL-RFTCPIVLELLEDSYAYVKRRVEELKGSFH----PRTSDGKF 160
Query: 170 GLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVL 229
GL +SD GN + D F + D ++ EL I GVI+ L V A+IG D + L+L
Sbjct: 161 GLLMSDHGNVLADVRFPNVQDSVQLNQELKKIAGVIDTSLLTEEVTKALIGKED-DFLLL 219
Query: 230 QK 231
+K
Sbjct: 220 EK 221
>gi|256850582|ref|ZP_05556008.1| ribose 5-phosphate isomerase [Lactobacillus crispatus MV-1A-US]
gi|262047018|ref|ZP_06019977.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus MV-3A-US]
gi|312984241|ref|ZP_07791586.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus CTV-05]
gi|256712605|gb|EEU27600.1| ribose 5-phosphate isomerase [Lactobacillus crispatus MV-1A-US]
gi|260572595|gb|EEX29156.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus MV-3A-US]
gi|310894336|gb|EFQ43413.1| ribose 5-phosphate isomerase A [Lactobacillus crispatus CTV-05]
Length = 210
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLS 81
MT+ +G GS + +A + + + S T CK + L + +D++
Sbjct: 1 MTISLGGGSNVFKLSQAIAQ---HNLDITLYSPSELTRFRCKELGLELLPSTAATKIDIA 57
Query: 82 IDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF-LGRGMLPIEIDQF 140
DG D ID ++K GG L EK A A +FI++ + + L +E+
Sbjct: 58 FDGCDSIDKNFNVLKSLGGIHLFEKQAAQIAKQFILLLPSQRIQPILNPKIPLCLEVAPP 117
Query: 141 GVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCN 200
VN+ ++ S L ++R + + + GNY++D F + ++ +LC
Sbjct: 118 CVNQV----QKYLSSLHLTSKIRQDSSVAAFARTPLGNYLIDVFNEDWHNITELNRQLCL 173
Query: 201 IPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GV+ LF N+ +I DGE + L++
Sbjct: 174 QNGVVSSSLFENLTTS-LITEKDGEIIELKR 203
>gi|297791367|ref|XP_002863568.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309403|gb|EFH39827.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 290
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 87/233 (37%), Gaps = 23/233 (9%)
Query: 9 NAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIH 65
AA + YV GM +G+G+G + + L ++ +G V +P S + +
Sbjct: 45 RAAHHTVDKYVKSGMIIGLGSGEASDMAIRYLGHQLRSGSLQNVVGVPMSARSASEAAKS 104
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGA------LLREKIIAHAASRFIVI 118
IPL D +D + D ++ + G +L++K I AA + +
Sbjct: 105 GIPLEYFRDGFQIDFAFHDADAVEENTLIAVIGRRRISQEDDYILKQKSIVKAADEAVFM 164
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSG 170
E + G +P+ + + + + + E+ R G
Sbjct: 165 IKEEQY-KAGLEGSVPVLVQSLNWLAIAEEIDD---LYLGDAEVWRRASVENAGPLGGDF 220
Query: 171 LFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTS 222
V+ G+ I+D F IP ++ L I GV++HGL I +I
Sbjct: 221 PIVTSDGHNILDVIFTTPIPSLADVATSLDKIDGVVDHGLIIKTRCTVMIAEE 273
>gi|312075336|ref|XP_003140372.1| hypothetical protein LOAG_04787 [Loa loa]
gi|307764468|gb|EFO23702.1| hypothetical protein LOAG_04787 [Loa loa]
Length = 156
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 20/158 (12%)
Query: 1 MDALQMKRNAARRAIQ-------------YVVDGMTLGMGTGSTAKEFMILLADKIANG- 46
M MK R A+ +V G +G+G+G+TAK F+ LA+K+ +G
Sbjct: 2 MLQDAMKT---RSALDPAKRAAAYAAGKQHVKSGYRIGVGSGTTAKFFVEFLAEKVNDGT 58
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ +PSS +T + + + E+ +DL IDG DE+DS L IKG GG L +E
Sbjct: 59 VKDIICVPSSFSTRQWLIDSGLQVIDLENTLDLDLCIDGADEVDSNLNCIKGGGGCLTQE 118
Query: 106 KIIAHAASRFIVIGDESKRVDF--LGRGMLPIEIDQFG 141
KI+ +A +F +I D SK+ + +PIE+ FG
Sbjct: 119 KIVQASAKKFYIIADASKQSEKLGDKNFPIPIEVVPFG 156
>gi|226504086|ref|NP_001151663.1| ribose-5-phosphate isomerase [Zea mays]
gi|195648506|gb|ACG43721.1| ribose-5-phosphate isomerase [Zea mays]
Length = 295
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/240 (20%), Positives = 97/240 (40%), Gaps = 23/240 (9%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHH 66
AA+ + +V GM +G+G+G + + L ++ G + + SS + +
Sbjct: 53 AAKLTVDKFVTSGMVVGLGSGPASALAIQYLGTRLRRGSLAGITAVTSSVLSASEADKAG 112
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRL-------IKGYGGALLREKIIAHAASRFIVIG 119
I +S ++ + +D + + I+ + + + EK +A +A + I
Sbjct: 113 IRANSYQEGTQIDFAFTDAEAIEEGTLAAVIGRRKTESGEPSFMAEKAMAKSAHKLAFIT 172
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSGL 171
K V G +P+ I T + + F + E+ R G
Sbjct: 173 GNDKYVTTGVEGSIPVLIKSGNWIDTAEEIDD---LFLGDAEVWRRPSFGTAGPLGGYHP 229
Query: 172 FVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
V+ G++++D F I D ++ +L + GV++HG+ + A+I + GE VL
Sbjct: 230 LVTKDGHHVLDVIFTTPIQDLGQVAEKLDKVDGVVDHGIICSNQPYAVIASK-GEVQVLD 288
>gi|303390940|ref|XP_003073700.1| ribose 5-phosphate isomerase [Encephalitozoon intestinalis ATCC
50506]
gi|303302848|gb|ADM12340.1| ribose 5-phosphate isomerase [Encephalitozoon intestinalis ATCC
50506]
Length = 199
Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 18 VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS 77
V +G+GTG+T + ++ +L V +PSS T + + + SP S
Sbjct: 8 VESRTVIGIGTGTTIERYIGVL------DREVVYVPSSIQTALKLREKGLIVSSPLGHES 61
Query: 78 VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEI 137
+DL IDG D D LIKG GGAL EK++ A I+I K + ++PIEI
Sbjct: 62 LDLYIDGADYFDKCGNLIKGGGGALTTEKLLYSMAKDIIIIVQRHKYRETFEGCLVPIEI 121
Query: 138 DQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGE 197
+ K LS L+E L E +G +SD GN IVD + E
Sbjct: 122 SSISLMKFLSILQEYKLKHFLRET----TGKAGPLISDLGNCIVDVEYN-----ADFISE 172
Query: 198 LCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+I GVIEHGLF ++G +++
Sbjct: 173 CKSICGVIEHGLF----------EANGYTTIIE 195
>gi|116495767|ref|YP_807501.1| ribose 5-phosphate isomerase [Lactobacillus casei ATCC 334]
gi|116105917|gb|ABJ71059.1| ribose-5-phosphate isomerase [Lactobacillus casei ATCC 334]
Length = 223
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 93/228 (40%), Gaps = 18/228 (7%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIH 65
+ AA A+ + + +G G + LAD I +Q+ S T +C+
Sbjct: 4 QIAA--ALALIQPHQVVSLGGG---RHM-QALADGIVARALPGIQICSPSEVTLAYCQTL 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P + ++ DG D D L L+K GG EK+ A A+ ++++ K V
Sbjct: 58 GLPTTTQIASD---IAFDGCDSADKDLNLLKSNGGIHFYEKLHAQASHAYVILT-AQKNV 113
Query: 126 DFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ +P+ E+ + ++ K GL + R+ G + GN ++D
Sbjct: 114 NAQLNAAVPLTLEVVSAASEQVRASAK----LLGLQAKRRMATTYMGYTRTRDGNELIDC 169
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L ++PGV+ F ++ +I T DG+ +++
Sbjct: 170 TMAEWTDIAKVDHLLASLPGVVATSYFAHLATLLLIETPDGQVHEIKQ 217
>gi|301067323|ref|YP_003789346.1| ribose 5-phosphate isomerase [Lactobacillus casei str. Zhang]
gi|300439730|gb|ADK19496.1| Ribose 5-phosphate isomerase [Lactobacillus casei str. Zhang]
Length = 223
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIH 65
+ AA A+ + + +G G + LAD I +Q+ S T +C+
Sbjct: 4 QIAA--ALALIQPHQVVSLGGG---RHM-QALADGIVARALPGIQICSPSEVTLAYCQTL 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P + ++ DG D D L L+K GG EK+ A A+ ++++ K V
Sbjct: 58 GLPTTTQIASD---IAFDGCDSADKDLNLLKSNGGIHFYEKLHAQASHAYVILT-AQKNV 113
Query: 126 DFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ +P+ E+ + +++ K GL + R+ G + GN ++D
Sbjct: 114 NAQLNAAVPLTLEVVSAASEQVMASSK----LLGLQAKRRMATTYMGYTRTRDGNELIDC 169
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L ++PGV+ F ++ +I T DG+ +++
Sbjct: 170 TMAEWTDIAKVDHLLASLPGVVATSYFAHLATLLLIETPDGQVHEIKQ 217
>gi|227533671|ref|ZP_03963720.1| ribose 5-phosphate isomerase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227188655|gb|EEI68722.1| ribose 5-phosphate isomerase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 238
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 18/228 (7%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIH 65
+ AA A+ + + +G G + LAD I +Q+ S T +C+I
Sbjct: 19 QIAA--ALALIQPHQVVSLGGG---RHM-QALADGIVARALPGIQICSPSEVTLAYCQIL 72
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P + ++ DG D D L L+K GG EK+ A A+ ++++ K V
Sbjct: 73 GLPTTTQIASD---IAFDGCDSADKDLNLLKSNGGIHFYEKLHAQASHAYVILT-AQKNV 128
Query: 126 DFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ +P+ E+ + +++ K GL + R+ G + GN ++D
Sbjct: 129 NAQLNAAVPLTLEVVSAASEQVMASAK----LLGLQAKRRVATTYMGYTRTRDGNELIDC 184
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L ++PGV+ F ++ +I T DG+ +++
Sbjct: 185 KMAEWTDIAKVDHLLASLPGVVATSYFAHLATLLLIETPDGQVHEIKQ 232
>gi|191639252|ref|YP_001988418.1| Ribose 5-phosphate isomerase [Lactobacillus casei BL23]
gi|190713554|emb|CAQ67560.1| Ribose 5-phosphate isomerase [Lactobacillus casei BL23]
Length = 223
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIH 65
+ AA A+ + + +G G + LAD I +Q+ S T +C+
Sbjct: 4 QIAA--ALALIQPHQVVSLGGG---RHM-QTLADGIVARALPGIQICSPSEVTLAYCQTL 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P + ++ DG D D L L+K GG EK+ A A+ ++++ K V
Sbjct: 58 GLPTTTQIASD---IAFDGCDSADKDLNLLKSNGGIHFYEKLHAQASHAYVILT-AQKNV 113
Query: 126 DFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ +P+ E+ + +++ K GL + R+ G + GN ++D
Sbjct: 114 NAQLNAAVPLTLEVVSAASEQVMASAK----LLGLQAKRRMATTYMGYTRTRDGNELIDC 169
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L ++PGV+ F ++ +I T DG+ +++
Sbjct: 170 TMAEWTDIAKVDHLLASLPGVVATSYFAHLATLLLIETPDGQVHEIKQ 217
>gi|327383333|gb|AEA54809.1| Ribose-5-phosphate isomerase, putative [Lactobacillus casei LC2W]
gi|327386516|gb|AEA57990.1| Ribose-5-phosphate isomerase, putative [Lactobacillus casei BD-II]
Length = 223
Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIH 65
+ AA A+ + + +G G + LAD I +Q+ S T +C+
Sbjct: 4 QIAA--ALALIQPHQVVSLGGG---RHM-QTLADGIVARALPGIQICSPSEVTLAYCQTL 57
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P + ++ DG D D L L+K GG EK+ A A+ ++++ K V
Sbjct: 58 GLPTTTQIASD---IAFDGCDSADKDLNLLKSNGGIHFYEKLHAQASHAYVILT-AQKNV 113
Query: 126 DFLGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDA 183
+ +P+ E+ + +++ K GL + R+ G + GN ++D
Sbjct: 114 NAQLNAAVPLTLEVVSAASEQVMASAK----LLGLQAKRRMATTYMGYTRTRDGNELIDC 169
Query: 184 FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L ++PGV+ F ++ +I T DG+ +++
Sbjct: 170 TMAEWTDIAKVDHFLASLPGVVATSYFAHLATLLLIETPDGQVHEIKQ 217
>gi|312072910|ref|XP_003139281.1| ribose 5-phosphate isomerase [Loa loa]
gi|307765549|gb|EFO24783.1| ribose 5-phosphate isomerase [Loa loa]
Length = 143
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 110 HAASRFIVIGDESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL-RR 166
+A +F +I D SK+ + +PIE+ FG L+ +K G ELR+ +
Sbjct: 1 ASAKKFYIIADASKQSEKLGDKNFPIPIEVVPFGYAPVLNWIKRKE---GGEAELRMNGK 57
Query: 167 NGSGLFVSDGGNYIVDAFFGF-----IPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
F++D N+I+D F D + L ++PGV+E GLFI + + A T
Sbjct: 58 GKLDPFITDNNNFILDWNFPKNKYVTTEDLAALHTRLISLPGVVETGLFIGVAEKAYFAT 117
Query: 222 SDGECLVLQK 231
+DG +
Sbjct: 118 ADGNVTERLR 127
>gi|153830482|ref|ZP_01983149.1| ribose 5-phosphate isomerase A [Vibrio cholerae 623-39]
gi|148874048|gb|EDL72183.1| ribose 5-phosphate isomerase A [Vibrio cholerae 623-39]
Length = 116
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 11/123 (8%)
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR 165
K++A A +F+ I D +K VD LG LP+E+ + G + R
Sbjct: 2 KVVAAIAKKFVCIVDGTKAVDVLGNFPLPVEVIPMARSYVARE----LVKLGGDPVYREG 57
Query: 166 RNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDG 224
++D GN I+D + I P+ + ++ I GV+ GLF + D I GT G
Sbjct: 58 ------VITDNGNVILDVYNMKITHPKDLESKINGIAGVVTVGLFAHRGADVVITGTPQG 111
Query: 225 ECL 227
+
Sbjct: 112 AKI 114
>gi|309806352|ref|ZP_07700365.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 03V1-b]
gi|308167336|gb|EFO69502.1| ribose 5-phosphate isomerase A [Lactobacillus iners LactinV 03V1-b]
Length = 132
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTEN 60
++K+ AA++A V LG+GTGST F+ LA ++ +S +
Sbjct: 6 QDELKQEAAKKAALMVEPNSVLGVGTGSTVAFFIDELAKINREKALNLKAIVTTSNRSRA 65
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ ++ +V +DL++DG D +D L IKG GGAL EK +A + + +
Sbjct: 66 QLEKQGFKVNELSEVDQIDLTVDGADRVDLNLNGIKGGGGALTLEKNVAVNSKKIYGLLM 125
Query: 121 E 121
+
Sbjct: 126 K 126
>gi|194699174|gb|ACF83671.1| unknown [Zea mays]
Length = 136
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 107 IIAHAASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVAS-CFGLNEELRL 164
+I A RF+VI DESK V G +P+E+ FG TL +++V G + LR
Sbjct: 1 MIEGAGDRFVVIVDESKLVPRLGCTGAVPVEVIPFGAPHTLGLIRKVFDGVPGFHARLRT 60
Query: 165 -----RRNGSGLFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCA 217
+ F++D GNYIV+ FF G D IS L I GVIEHG+F+ M
Sbjct: 61 VPAANGEDSDAPFLTDNGNYIVEMFFEDGIRGDLLDISDRLLRITGVIEHGMFLGMATTV 120
Query: 218 IIGTSDGECLVLQK 231
I+ DG V+ K
Sbjct: 121 IVANKDGTVTVINK 134
>gi|227889432|ref|ZP_04007237.1| ribose 5-phosphate isomerase [Lactobacillus johnsonii ATCC 33200]
gi|227849910|gb|EEJ59996.1| ribose 5-phosphate isomerase [Lactobacillus johnsonii ATCC 33200]
Length = 221
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 91/225 (40%), Gaps = 10/225 (4%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
+++A+ + M++ +G GS L A+ + + SS T+ CK +
Sbjct: 3 LISQKALSKIKPNMSISLGGGSNVLNLAKDLCQ--AHISNLTLYSSSEITQAKCKQFGLK 60
Query: 69 LHSPEDV-SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD- 126
+ + +DL+ DG D ID +K GG L EK+ A +I++ + D
Sbjct: 61 VLPFSENSPHLDLAFDGCDSIDKNFNALKSGGGIHLFEKLAAENTEEYILLLPAERFRDE 120
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF-F 185
L +E+ + ++++ E + ++RL + + S GN ++D +
Sbjct: 121 LSPTIPLCLEVVPACLENVINSIPEE-----YDYKIRLGKAVASFARSPLGNILIDIYPH 175
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+ + ++ L GV+ F +V I T + + +
Sbjct: 176 TSWNNIKKLNSFLLKQNGVVSSSYFEGIVTSIITETKNKAVEIKK 220
>gi|326507868|dbj|BAJ86677.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 290
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 111 AASRFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCF-GLNEELRLRRNG 168
A +RF+VI DESK V G +P+E+ FG TL +++V G + LR ++
Sbjct: 160 AGARFVVIVDESKLVPRLGCTGAVPVEVVPFGSVYTLGLIRKVFDKLPGFHARLRTVKSK 219
Query: 169 SG-----LFVSDGGNYIVDAFFGF-IP-DPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
+G LF++D GNYIV+ FF I + + IS L I GV+EHG+F+ M I+
Sbjct: 220 AGDHQEDLFLTDNGNYIVEMFFDDGIHGNLRDISDSLLRITGVVEHGMFLGMATKVIVAK 279
Query: 222 SDGECLVLQK 231
DG VL +
Sbjct: 280 KDGTVAVLSR 289
>gi|268319997|ref|YP_003293653.1| hypothetical protein FI9785_1530 [Lactobacillus johnsonii FI9785]
gi|262398372|emb|CAX67386.1| rpiA2 [Lactobacillus johnsonii FI9785]
Length = 221
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 91/225 (40%), Gaps = 10/225 (4%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
+++A+ + M++ +G GS L A+ + + S T+ CK +
Sbjct: 3 LISQKALSKIKPNMSISLGGGSNVLNLAKDLCQ--AHISNLTLYSPSEITQAKCKQFGLK 60
Query: 69 LHSPEDV-SSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD- 126
+ + S +DL+ DG D ID +K GG L EK+ A +I++ + D
Sbjct: 61 VLPFSENSSHLDLAFDGCDSIDKNFNALKSGGGIHLFEKLAAENTEEYILLLPAERFRDE 120
Query: 127 FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF-F 185
L +E+ + ++++ E + ++RL + + S GN ++D +
Sbjct: 121 LSPTIPLCLEVVPACLENVINSIPEE-----YDYKIRLGKAVASFARSPLGNILIDIYPH 175
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
+ + ++ L GV+ F +V I T + + +
Sbjct: 176 TSWNNIKKLNSFLLKQNGVVSSSYFEGIVTSIITETKNKAVEIKK 220
>gi|239630177|ref|ZP_04673208.1| ribose-5-phosphate isomerase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239527789|gb|EEQ66790.1| ribose-5-phosphate isomerase [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 223
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 85/226 (37%), Gaps = 14/226 (6%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHI 67
+ AA A+ + + +G G + + + G ++
Sbjct: 4 QIAA--ALALIQPYQVVSLGGGRHMQTLADGIVARALPGIQICSPSEVTLAYCQTLGLPT 61
Query: 68 PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127
D ++ DG D D L L+K GG EK+ A A+ ++++ K V+
Sbjct: 62 TTQIVSD-----IAFDGCDSADKDLNLLKSNGGIHFYEKLHAQASHAYVILT-AQKNVNA 115
Query: 128 LGRGMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+P+ E+ + +++ K GL + R+ G + GN ++D
Sbjct: 116 QLNAAVPLTLEVVSAASEQVMASAK----LLGLQAKRRMATTYMGYTRTRDGNELIDCTM 171
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
D + L ++PGV+ F ++ +I T DG+ +++
Sbjct: 172 AEWTDIAKVDHLLASLPGVVATSYFAHLATLLLIETPDGQAHEIKQ 217
>gi|6687041|emb|CAB64791.1| RpiA protein [Burkholderia sp.]
Length = 122
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 1 MDALQMKRNAARRAIQYVV----DGMTLGMGTGSTAKEFMILLADKIANGFRVQV-IPSS 55
MD +K+ AA YV G LG+G GST + L + A G + + SS
Sbjct: 1 MDQYALKQRAALAGADYVQAHAPKGALLGVGAGSTVNILIDALVAQQAFGRHFRGAVSSS 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
R T + +P+ ++ L +DG DEID R+IKG GGAL EKI+A AA F
Sbjct: 61 RATTARLESCGVPVFELNQADALPLYLDGADEIDPHGRMIKGGGGALTGEKIVAAAAKVF 120
Query: 116 IV 117
+
Sbjct: 121 VC 122
>gi|255578039|ref|XP_002529890.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
gi|223530617|gb|EEF32493.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
Length = 262
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 21/224 (9%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
M +G+G+G + + L ++ G + IP S + + I L +D S +D
Sbjct: 1 MVIGLGSGHASGMAIQYLGRQLRIGVLKDIVGIPMSIASASEAAKAGIRLDRYQDGSQID 60
Query: 80 LSIDGFDEIDSRLRLIK------GYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
+ D D ++ + + ++EK I +AASR + + E + L G +
Sbjct: 61 FAFDDADVLEEDTLIAVVGRQKMQGEESFIQEKSILNAASRHVFMISEKQYKSRLD-GSI 119
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSGLFVSDGGNYIVDAFF 185
P+ I +T + + F + E+ R G V+ G+ ++D F
Sbjct: 120 PVLIQPLSWMETAEQIDD---LFLGDAEIWRRPSIGQAGPLGGDFPLVTREGHNVLDVIF 176
Query: 186 -GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I ++ L + GV++HG+ A+I + G +V
Sbjct: 177 TSPIQSLAEVAESLDKVDGVVDHGIISKFPCTAVIASDSGLYIV 220
>gi|300361085|ref|ZP_07057262.1| ribose 5-phosphate isomerase [Lactobacillus gasseri JV-V03]
gi|300353704|gb|EFJ69575.1| ribose 5-phosphate isomerase [Lactobacillus gasseri JV-V03]
Length = 221
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 10/225 (4%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
+++A+ + MT+ +G GS L + G + S T+ C+ +
Sbjct: 3 IISKKALSKIQPNMTVSLGGGSNVLTLAKDLNNAQIPGLLL--YSPSEITKFQCEQLGLN 60
Query: 69 LHSPED-VSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDF 127
+ + D + DL+ DG D ID +K GG L EKI A A +I++ + + +
Sbjct: 61 ILALNDNMPKFDLAFDGCDSIDQNFNALKSGGGIHLFEKIAAENAKEYILLLPKERFKET 120
Query: 128 -LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAF-F 185
L IEI +N + + + G ++RL ++ + S GN ++D +
Sbjct: 121 LNPTISLCIEIIPNCLNNLMKKIPQ-----GYTAKIRLSQSVASFAHSPLGNLLIDIYPN 175
Query: 186 GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D + ++ L GVI F N+V I ++ + +
Sbjct: 176 NSWSDIEQLNDFLLKQNGVISSSYFKNLVTSIITENNNEAIEIKK 220
>gi|77024165|gb|ABA55553.1| chloroplast ribulose phosphate isomerase [Karlodinium micrum]
Length = 158
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 2 DALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNT 58
++K+ +A+ +V GM +G+GTGSTA + + K+ +G + IP+S T
Sbjct: 53 SQDELKKQVGYKAVDDHVRSGMVIGLGTGSTAYFAVERVGQKLKSGELKGIVAIPTSTRT 112
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
E IPL + + +D+SIDG D +D L L+KG GGA
Sbjct: 113 EKQAASWGIPLETLDTRPCLDVSIDGADAVDPFLNLVKGGGGAHF 157
>gi|168004425|ref|XP_001754912.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694016|gb|EDQ80366.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
M++G+GTG + + + +++ +G + +P S + +PL + ED +D
Sbjct: 1 MSVGLGTGHASGMAIAYIGERLRDGTLRDIICVPMSSASAAAAAQAGVPLTTFEDQPQLD 60
Query: 80 LSIDGFDEID-SRLRLIKGYG-----GALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
++ D D + L + G ++L+EK I AA + + I DE + V L G +
Sbjct: 61 VAFDDADMVQEGTLFAVIGRKGVEGRQSILKEKAIMQAAKQLVFIIDEKQFVGKL-EGAV 119
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSGLFVSDGGNYIVDAFF 185
P+ I Q + + F + E+ R G ++ G++++D F
Sbjct: 120 PVLIQQEDWLDVAEEIDD---MFLGDAEVWRRPSFGEAGPLGGDNPLITPEGHFLLDVIF 176
Query: 186 G-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
I + L +PGV+ HGL +++ A + + G
Sbjct: 177 TTPITTAADVVENLETVPGVMGHGLVMDVAYAAAVASPTG 216
>gi|213580669|ref|ZP_03362495.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 91
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A+QYV G +G+GTGSTA F+ L G + SS +
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLR 93
K I + +V S+ + +DG DEI+ ++
Sbjct: 59 KLKGLGIHVFDLNEVDSLGIYVDGADEINGHMQ 91
>gi|145628839|ref|ZP_01784639.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 22.1-21]
gi|144979309|gb|EDJ88995.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 22.1-21]
Length = 102
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ L+MK+ AA+ A+QYV +G+G+GST F+ L I + + + +S+ +E
Sbjct: 1 MNQLEMKKLAAQAALQYVKADTIVGVGSGSTVNCFIEALG-TIKDKIQ-GAVAASKESEE 58
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
+ I + + DVSS+D+ +DG DEI+ + +IK +
Sbjct: 59 LLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKRRRRS 99
>gi|224151338|ref|XP_002337090.1| predicted protein [Populus trichocarpa]
gi|222837997|gb|EEE76362.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 107 IIAHAASRFIVIGDESKRVDF--LGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL 164
++ A+ F+V+ D++K VD + +P+E+ QF L L+E+ G+ +LR
Sbjct: 1 MVEAASDEFVVVADDTKLVDGLGGSKLAMPVEVVQFCWKYNLLRLQEMFKDEGVEAKLRA 60
Query: 165 RRNGSGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
+G +V+D NYIVD +F I D E+ + GV+EHGLF++M II
Sbjct: 61 GEDGK-PYVTDNFNYIVDLYFENPIKDGYAAGKEISGLEGVVEHGLFLDMATAVIIAGKT 119
Query: 224 GECLVLQK 231
G V K
Sbjct: 120 G-VEVKSK 126
>gi|169840537|gb|ACA96910.1| putative ribose 5-phosphate isomerase [Oenothera elata subsp.
hookeri]
gi|169840541|gb|ACA96912.1| putative ribose 5-phosphate isomerase [Oenothera grandiflora]
Length = 93
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
+KR AA +A++YV GM LG+GTGSTAK + + + + G + IP+S+ T
Sbjct: 1 SQEDLKRIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLQNIVGIPTSKKTH 60
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSR 91
IPL + +DL+IDG DE+D+
Sbjct: 61 EQALSVGIPLSDLDSHPVLDLAIDGADEVDTH 92
>gi|149391125|gb|ABR25580.1| ribose 5 phosphate isomerase [Oryza sativa Indica Group]
Length = 130
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 114 RFIVIGDESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR------ 166
RF+VI DESK V G +P+E+ FG + TL +++V RLR
Sbjct: 2 RFVVIVDESKLVPRLGCTGAVPVEVVPFGCDHTLGLVRKVFDGLPGF-SARLRTVASKDG 60
Query: 167 -NGSGLFVSDGGNYIVDAFF--GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSD 223
+FV+D GNYIV+ FF G D IS L I GV+EHG+F+ M ++ D
Sbjct: 61 EGKEEMFVTDNGNYIVEMFFEDGIRGDLNEISDRLLRITGVVEHGMFLGMATSVVVAKKD 120
Query: 224 GECLVLQK 231
G +L K
Sbjct: 121 GTVALLHK 128
>gi|12957704|gb|AAK09222.1|AC084320_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 258
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 81/211 (38%), Gaps = 26/211 (12%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHH 66
AA+ + +V GM +G+G+G + + L ++ G + IPSS + +
Sbjct: 58 AAKLTVDRFVESGMVVGLGSGPASGLAIQYLGTRLRRGSLTGILGIPSSTISASEAVKAG 117
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRL-------IKGYGGALLREKIIAHAASRFIVIG 119
I + S E+ + +D + D I+ + + + EK I +A + I
Sbjct: 118 IQVSSYEEGTQIDFAFTDADIIEEDTMTAVIGRRKTESGEPSFMVEKGIVKSADKLAFII 177
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNY 179
K V G +P+ + + G V+ G++
Sbjct: 178 GHEKYVK-GIEGSIPVLV-----KSVWRRPSIGTAGPLG---------GDFPLVTKEGHH 222
Query: 180 IVDAFF-GFIPDPQIISGELCNIPGVIEHGL 209
++D F IPD ++ L I GV++HG+
Sbjct: 223 VLDVIFTTPIPDLGKVAESLEKIAGVVDHGI 253
>gi|242032795|ref|XP_002463792.1| hypothetical protein SORBIDRAFT_01g006240 [Sorghum bicolor]
gi|241917646|gb|EER90790.1| hypothetical protein SORBIDRAFT_01g006240 [Sorghum bicolor]
Length = 255
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 82/230 (35%), Gaps = 39/230 (16%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIP 68
AA+ + +V GM +G+G+G + + L ++ G + +
Sbjct: 49 AAKLTVDKFVSSGMVVGLGSGPASALAIQYLGTRLRRGSLTGITAVTSF----------- 97
Query: 69 LHSPEDVSSVDLSIDGFDEIDSRLRL-------IKGYGGALLREKIIAHAASRFIVIGDE 121
S +D + + I+ + + + EK +A +A + I
Sbjct: 98 ---LGLTSQIDFAFTDAEVIEEGTLAAVIGRRKTESGEPSFMVEKAMAKSADKLAFITGH 154
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIV 181
K V G +P+ + FG L G V+ G++++
Sbjct: 155 DKYV-TGIEGSIPVLV-----KSVWRR-----PSFGTAGPL----GGDHPLVTKEGHHVL 199
Query: 182 DAFF-GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQ 230
D F I D ++ +L I GV++HG+ A+I + GE VL
Sbjct: 200 DVIFTTPISDLGQVAEKLDKIDGVVDHGIICGNQSYAVIASK-GEVQVLD 248
>gi|213024391|ref|ZP_03338838.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 100
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVS 76
YV G +G+GTGSTA F+ L G + SS + K I + +V
Sbjct: 1 YVQPGTIVGVGTGSTAAHFIDALGTM--KGQIEGAVSSSDASTEKLKGLGIHVFDLNEVD 58
Query: 77 SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
S+ + +DG DEI+ +++IKG G AL REKIIA A +FI I
Sbjct: 59 SLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICI 100
>gi|323341185|ref|ZP_08081432.1| ribose-5-phosphate isomerase [Lactobacillus ruminis ATCC 25644]
gi|323091379|gb|EFZ34004.1| ribose-5-phosphate isomerase [Lactobacillus ruminis ATCC 25644]
Length = 215
Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 82/223 (36%), Gaps = 17/223 (7%)
Query: 12 RRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR-NTENFCKIHHIPLH 70
+ A++ + MT+ G GST L D+ + + + T + +
Sbjct: 3 QEAMKMIKPEMTVSFGGGSTVARLAKYLCDEDETLRKTLKVTTPSLETMEVLNKLNYQIV 62
Query: 71 SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGR 130
+ +DV +D++ DG D + L K GG + EK A A R++++ +
Sbjct: 63 ALDDVEKIDVAFDGCDYVTQNLNAQKCMGGIHVDEKKAAKKALRYVLLTKPERIGKT-YN 121
Query: 131 GMLPI--EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFI 188
LPI E++Q + L + + + GN + D +
Sbjct: 122 AKLPICAEVEQDEADLFLKMADQAGFEAKNRPGI----------KTSRGNLLFDLYNEKC 171
Query: 189 PDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
+ ++ PGV+ F ++ I G+ + L+K
Sbjct: 172 TQAD--AEDVETWPGVVGTSSFFDLCTDVI-YEEKGKTIHLRK 211
>gi|70933774|ref|XP_738212.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514241|emb|CAH86865.1| hypothetical protein PC302198.00.0 [Plasmodium chabaudi chabaudi]
Length = 138
Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 118 IGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
I DESK + G +PIEI FG + +L ++++ N +LR +F++D
Sbjct: 22 IVDESKMCEDGLGTTGAVPIEILSFGYEMIIESLLKISALK--NCTYKLREKDGEIFITD 79
Query: 176 GGNYIVDAFFG-FIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
NYIVD FF I + ++ GV++HG+F NM A+I S+G L L K
Sbjct: 80 NHNYIVDFFFETPIENLVKTCEQIKMTTGVVDHGIFANMASIALISKSNGTILTLNK 136
>gi|145628840|ref|ZP_01784640.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 22.1-21]
gi|144979310|gb|EDJ88996.1| ribose-5-phosphate isomerase A [Haemophilus influenzae 22.1-21]
Length = 103
Score = 98.4 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 120 DESKRVD-FLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGN 178
D SK+VD LP+E+ ++ + G + E R V+D GN
Sbjct: 2 DSSKQVDVLGSTFPLPVEVIPMARSQVGRK----LAALGGSPEYREG------VVTDNGN 51
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLF-INMVDCAIIGTSDGECLV 228
I+D I +P + EL N+ GV+ +G+F + D I+GT +G ++
Sbjct: 52 VILDVHNFSILNPVEMEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVI 102
>gi|84874518|gb|ABC68263.1| ribose 5-phosphate isomerase-like [Saussurea involucrata]
Length = 231
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 21/224 (9%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
M +G+G+G + + L K+ G V IP+S + + + IPLH +D S +D
Sbjct: 1 MVVGLGSGVASSLTIQYLGQKLRVGLLRDVVGIPTSVGSASEAEKAGIPLHQYQDGSQID 60
Query: 80 LSIDGFDEID-SRLRLIKG-----YGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
L+ + D ++ L + G +++ EK I+ I++ E K+ + G +
Sbjct: 61 LAFNDADIVEEGSLNAVIGHQRLQGEESIMEEKRISDVTENLILMLTE-KQYKSVIEGAI 119
Query: 134 PIEIDQFGVNKTLSALKEVASCFGLNEELRLR--------RNGSGLFVSDGGNYIVDAFF 185
P+ + T + + F + E+R R G V+ G ++D F
Sbjct: 120 PVLVKSVSWMDTAEEIDD---LFVGDAEVRRRASIGHAGPTGGDFPLVTREGYNVLDVIF 176
Query: 186 -GFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLV 228
I ++ L NI GV HG+ A++ T G ++
Sbjct: 177 TSPISSLAEVAKLLDNIDGVACHGIITKTPCTAVMTTESGLYII 220
>gi|322796725|gb|EFZ19158.1| hypothetical protein SINV_09771 [Solenopsis invicta]
Length = 120
Score = 95.7 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 121 ESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYI 180
+S+++ + +PIE+ ++ +G +LR+ +G ++D GN+I
Sbjct: 13 KSQKLGDQYKKGIPIEVVPMAYVPI---QHKIEDKYGGKLKLRMAIAKAGPVITDNGNFI 69
Query: 181 VD-AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+D F I I+ E+ IPGV+E GLF+NM G DG
Sbjct: 70 LDWCFPPNIECWDDINNEISLIPGVVETGLFLNMKKKVYFGMEDG 114
>gi|300811869|ref|ZP_07092332.1| ribose 5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497137|gb|EFK32196.1| ribose 5-phosphate isomerase A [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 216
Score = 95.7 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 16/219 (7%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPE 73
A++ + G + +G GS + +A + + + T + + E
Sbjct: 8 ALKKIQPGQRVSLGGGSNVADLTRAIA---KADLALDLYSPAPATRQLGASLGLVIKPAE 64
Query: 74 DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD-FLGRGM 132
+ +DL+ DG D +D LR +K GG L EKI A A +I++ E + +
Sbjct: 65 EADQLDLAFDGADSVDFSLRALKSKGGIQLFEKIAAQEADEYILLLPEGRLREKLDAEIQ 124
Query: 133 LPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQ 192
L +E+ V L+ GL + +R + S L GN +VD + +
Sbjct: 125 LCLEVAAPAVKSLLN------FAKGLALKTSVREDESIL-----GNKLVDLYAENWDKIE 173
Query: 193 IISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
++ +L GV+ LF V I +G+ + +++
Sbjct: 174 EVNQQLLAFNGVVASSLFAGEVTSVIT-VQNGQAVEIRR 211
>gi|332708211|ref|ZP_08428201.1| ribose 5-phosphate isomerase [Lyngbya majuscula 3L]
gi|332353037|gb|EGJ32587.1| ribose 5-phosphate isomerase [Lyngbya majuscula 3L]
Length = 102
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCK 63
MK+ + A + V GM +G+GTGST + L D++ +G + IP+S E K
Sbjct: 11 MKQEVGKAAAKRVQSGMIVGLGTGSTTAYAIQFLGDRLNSGEIKDIVGIPTSFQAEVLAK 70
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRL 94
+ IPL + + V +D++IDG DE+D +
Sbjct: 71 QYGIPLTTLDAVDHIDVAIDGADEVDPQKNF 101
>gi|218193847|gb|EEC76274.1| hypothetical protein OsI_13748 [Oryza sativa Indica Group]
Length = 312
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 77/200 (38%), Gaps = 23/200 (11%)
Query: 10 AARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHH 66
AA+ + +V GM +G+G+G + + L ++ G + IPSS + +
Sbjct: 58 AAKLTVDRFVESGMVVGLGSGPASGLAIQYLGTRLRRGSLTGILGIPSSTISASEAVKAG 117
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRL-------IKGYGGALLREKIIAHAASRFIVIG 119
I + S E+ + +D + D I+ + + + EK I +A + I
Sbjct: 118 IQVSSYEEGTQIDFAFTDADIIEEDTMTAVIGRRKTESGEPSFMVEKGIVKSADKLAFII 177
Query: 120 DESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRR--------NGSGL 171
K V G +P+ + T + + F + E+ R G
Sbjct: 178 GHEKYVK-GIEGSIPVLVKSANWIDTAEEIDD---LFLGDAEVWRRPSIGTAGPLGGDFP 233
Query: 172 FVSDGGNYIVDAFF-GFIPD 190
V+ G++++D F IPD
Sbjct: 234 LVTKEGHHVLDVIFTTPIPD 253
>gi|226328282|ref|ZP_03803800.1| hypothetical protein PROPEN_02176 [Proteus penneri ATCC 35198]
gi|225203015|gb|EEG85369.1| hypothetical protein PROPEN_02176 [Proteus penneri ATCC 35198]
Length = 70
Score = 88.8 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++K+ A++YV G +G+GTGSTA F+ LA + V S +T
Sbjct: 1 MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALA-TMKGQIEGTVSSSEASTAK 59
Query: 61 FCKIHH 66
K+ H
Sbjct: 60 LKKLRH 65
>gi|309806319|ref|ZP_07700332.1| putative ribose 5-phosphate isomerase A [Lactobacillus iners
LactinV 03V1-b]
gi|308167303|gb|EFO69469.1| putative ribose 5-phosphate isomerase A [Lactobacillus iners
LactinV 03V1-b]
Length = 72
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 160 EELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAII 219
+ RL NG +++ GN+I+D IP P +++ L ++ GV+EHGLF+N+ + II
Sbjct: 2 PKYRLDDNGK-RYITHYGNFIIDLHVDPIPFPNVLAHYLDSVVGVVEHGLFLNICNEVII 60
Query: 220 GTSDGECLVLQK 231
SDG+ + ++
Sbjct: 61 AHSDGKIEIRKR 72
>gi|298204882|emb|CBI34189.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 85.7 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTE 59
+K+ AA +A+ YV GM LG+GTGSTA + L + G + +P+S+ TE
Sbjct: 80 TQDDLKKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGHLLKTGQLSDIVGVPTSKRTE 139
Query: 60 NFCKIHHIPLHSPE 73
IPL +
Sbjct: 140 EQALSLGIPLSQCQ 153
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 204 VIEHGLFINMVDCAIIGTSDGECLVLQK 231
V+EHGLF++M II DG V K
Sbjct: 172 VVEHGLFLDMATAVIIAGKDG-VTVKTK 198
>gi|169840539|gb|ACA96911.1| putative ribose 5-phosphate isomerase [Oenothera elata subsp.
hookeri]
Length = 81
Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHIPLHS 71
A++YV GM LG+GTGSTAK + + + + G + IP+S+ T IPL
Sbjct: 1 AVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLQNIVGIPTSKKTHEQALSVGIPLSD 60
Query: 72 PEDVSSVDLSIDGFDEIDSR 91
+ +DL+IDG DE+D+
Sbjct: 61 LDSHPVLDLAIDGADEVDTH 80
>gi|332376055|gb|AEE63168.1| unknown [Dendroctonus ponderosae]
Length = 101
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 163 RLRRNGSGLFVSDGGNYIVDA-FFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGT 221
R+ N +G V+D GN+I+D F + + ++ EL IPGV+E GLFI M A G
Sbjct: 21 RMAVNKAGPVVTDNGNFILDWTNFDQTLEWKNVNQELALIPGVVETGLFIQMAQEAYFGM 80
Query: 222 SDGECLVLQK 231
+G V ++
Sbjct: 81 PNGSVKVQKR 90
>gi|147808|gb|AAA73015.1| unnamed protein product [Escherichia coli]
Length = 66
Score = 81.9 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 172 FVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
V+D GN I+D I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 7 VVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 66
>gi|222631905|gb|EEE64037.1| hypothetical protein OsJ_18866 [Oryza sativa Japonica Group]
Length = 68
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 157 GLNEELRLRRNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI-NMVD 215
G R V+D GN I+D I DP+ + EL +PGV+ GLF D
Sbjct: 3 GGQPTWREG------VVTDNGNQILDIHNLQITDPEKLERELNQLPGVVCVGLFARRRAD 56
Query: 216 CAIIGTS 222
I+G
Sbjct: 57 VVIVGGE 63
>gi|213417997|ref|ZP_03351077.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 41
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
M ++K+ A+QYV G +G+GTGSTA F+ LA
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALAQ 41
>gi|23336830|ref|ZP_00121981.1| COG0120: Ribose 5-phosphate isomerase [Bifidobacterium longum
DJO10A]
Length = 67
Score = 78.4 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 172 FVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
+D N++VD I PQ ++ +L N GV+EHGLF+NMVD I+G +G
Sbjct: 6 VRTDENNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 58
>gi|87302077|ref|ZP_01084911.1| Ribose 5-phosphate isomerase [Synechococcus sp. WH 5701]
gi|87283645|gb|EAQ75600.1| Ribose 5-phosphate isomerase [Synechococcus sp. WH 5701]
Length = 91
Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 156 FGLNEELRLRRNGSGLFVSDGGNYIVDAFF-GFIPDPQIISGELCNIPGVIEHGLFINMV 214
G +LR+ +G V+D GN ++D F G I DP + + N+PGV+E+GLF+ +
Sbjct: 1 MGATADLRMAVKKAGPVVTDQGNLVLDLKFAGGITDPAALEQAINNLPGVLENGLFVGLT 60
Query: 215 DCAIIGTSD 223
D +D
Sbjct: 61 DPVAGAVAD 69
>gi|160879365|ref|YP_001558333.1| ribose 5-phosphate isomerase [Clostridium phytofermentans ISDg]
gi|160428031|gb|ABX41594.1| ribose 5-phosphate isomerase [Clostridium phytofermentans ISDg]
Length = 54
Score = 75.3 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
++ KR A ++AI Y+ DGM LG+GTGSTA + + + + NG ++ + +S
Sbjct: 1 MEQKRIAGQKAIDYIKDGMILGLGTGSTAYYMIKKVGELVQNGMNLKAVATS 52
>gi|159158553|gb|ABW94506.1| RpiA [Treponema pallidum subsp. endemicum]
gi|159158556|gb|ABW94508.1| RpiA [Treponema pallidum subsp. pallidum]
gi|159158559|gb|ABW94510.1| RpiA [Treponema pallidum subsp. pallidum str. Nichols]
gi|159158562|gb|ABW94512.1| RpiA [Treponema pallidum subsp. pallidum]
gi|159158565|gb|ABW94514.1| RpiA [Treponema pallidum subsp. pertenue]
gi|159158568|gb|ABW94516.1| RpiA [Treponema pallidum subsp. pertenue]
gi|159158571|gb|ABW94518.1| RpiA [Treponema pallidum subsp. pertenue]
gi|159158574|gb|ABW94520.1| RpiA [Treponema pallidum subsp. pertenue]
gi|159158577|gb|ABW94522.1| RpiA [Treponema pallidum subsp. pallidum]
gi|159158580|gb|ABW94524.1| RpiA [Treponema pallidum subsp. pertenue str. Gauthier]
gi|159158583|gb|ABW94526.1| RpiA [Treponema pallidum subsp. pertenue]
gi|159158586|gb|ABW94528.1| RpiA [Treponema pallidum subsp. pallidum]
gi|159158589|gb|ABW94530.1| RpiA [Treponema pallidum subsp. pallidum]
gi|159158592|gb|ABW94532.1| RpiA [Treponema pallidum subsp. endemicum]
gi|159158595|gb|ABW94534.1| RpiA [Treponema pallidum subsp. pallidum]
gi|159158598|gb|ABW94536.1| RpiA [Treponema pallidum subsp. pallidum str. Mexico A]
gi|159158604|gb|ABW94540.1| RpiA [Treponema pallidum subsp. pallidum]
gi|159158607|gb|ABW94542.1| RpiA [Treponema pallidum subsp. pertenue]
gi|159158610|gb|ABW94544.1| RpiA [Treponema pallidum subsp. pertenue]
gi|159158613|gb|ABW94546.1| RpiA [Treponema pallidum]
gi|159158616|gb|ABW94548.1| RpiA [Treponema paraluiscuniculi]
gi|159158619|gb|ABW94550.1| RpiA [Treponema paraluiscuniculi]
gi|159158622|gb|ABW94552.1| RpiA [Treponema paraluiscuniculi]
Length = 72
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 167 NGSGLFVSDGGNYIVDAFFGFIPD--PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G V+D GN+I+DA + +P PQ + L +PGVIE+GLF + +DG
Sbjct: 4 RKKGPVVTDHGNFILDARWQSLPTRTPQDMERALNALPGVIENGLFTERTVRVFVAHADG 63
Query: 225 ECLVLQ 230
Sbjct: 64 SVEERS 69
>gi|58337458|ref|YP_194043.1| ribose 5-phosphate [Lactobacillus acidophilus NCFM]
gi|227904093|ref|ZP_04021898.1| ribose 5-phosphate [Lactobacillus acidophilus ATCC 4796]
gi|58254775|gb|AAV43012.1| ribose 5-phosphate [Lactobacillus acidophilus NCFM]
gi|227868112|gb|EEJ75533.1| ribose 5-phosphate [Lactobacillus acidophilus ATCC 4796]
Length = 156
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ C+ + +HS + +D++ DG D ID L +K G L EKI A + +I
Sbjct: 6 KSRYNCQKIGLFVHSLNETDQIDIAFDGCD-IDYSLNTLKSGGNIYLYEKIAAQMSKEYI 64
Query: 117 VIGDESK-RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
++ + + + + + L IE+ + T+ + L E LR + S S
Sbjct: 65 LLLPQERIQKELSTKVPLSIEV----ASPTVKQIMNFCHSLNLKAE--LRLDTSSFARSP 118
Query: 176 GGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLF 210
GN I+D + D I+ +L GVI F
Sbjct: 119 LGNLIIDIYKPNWNDIAQINEQLLKQNGVIASSYF 153
>gi|159158601|gb|ABW94538.1| RpiA [Treponema pallidum subsp. pertenue]
Length = 72
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 167 NGSGLFVSDGGNYIVDAFFGFIPD--PQIISGELCNIPGVIEHGLFINMVDCAIIGTSDG 224
G V+D GN+I+DA + + PQ + L +PGVIE+GLF + +DG
Sbjct: 4 RKKGPVVTDHGNFILDARWQSLQTRTPQDMERALNALPGVIENGLFTERTVRVFVAHADG 63
Query: 225 ECLVLQ 230
Sbjct: 64 SVEERS 69
>gi|147857157|emb|CAN79225.1| hypothetical protein VITISV_005604 [Vitis vinifera]
Length = 167
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANG--FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
M +G+G+G + + L ++ G + IP S + + IPL +D S +D
Sbjct: 1 MVIGLGSGHASDMAIQYLGRQLRTGALKDITGIPMSVASASEAAKVGIPLGHYQDCSQID 60
Query: 80 LSIDGFDEI-DSRLRLIKG-----YGGALLREKIIAHAASRFIVIGDESKRVDFLGRGML 133
+ D D I + L I G ++++EK I AA + + I E K+ G +
Sbjct: 61 FAFDDADVIEEGTLVAIIGRRRLQGNESIIQEKSILKAADKLVFIIQE-KQYKCDLEGSI 119
Query: 134 PIEIDQFGVNKTLSALKE 151
P+ + +T + +
Sbjct: 120 PVLVQSLNWMETAEEIDD 137
>gi|307102867|gb|EFN51133.1| hypothetical protein CHLNCDRAFT_141332 [Chlorella variabilis]
Length = 284
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHH 66
AA A + D + +G+G+G + LA ++ G V+ +P+S
Sbjct: 32 AAALVANTFFRDEIAIGVGSGLGVTYVLEELAQRLGAGKLRGVRCVPASDAAAGEAAFLG 91
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSR----LRLIKGYGGA-----LLREKIIAHAASRFIV 117
+PL + ++ +DL I+ DE+ + L I G L R + +A AA+ IV
Sbjct: 92 VPLTTLQEAGRLDLFIEVADELAADAEGSLAFIIGRQQRPAQPQLHRARQLAAAATTNIV 151
Query: 118 IGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR--------RNGS 169
I +E + G LP+ + + G L + F + EL R R G
Sbjct: 152 IAEERAVLVPRLGGSLPVAVQEEGWEVVGEELDD---LFLGDAELWRRSNEEGAGPRGGD 208
Query: 170 GLFVSDGGNYIVDAFF-------GFIPDPQIISGELCNIPGVIEHGL 209
+VS G+ ++D F G D I+ E+ + GV+ HGL
Sbjct: 209 QPYVSAEGHALIDIRFYEGLKLFGEDADYGSIAAEIDGVEGVVAHGL 255
>gi|12054913|emb|CAC21178.1| putative ribose-5P-isomerase [Streptococcus thermophilus]
Length = 101
Score = 71.5 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 59 ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVI 118
+ IPL S +D+ S+D+++DG DE+D +L IKG GGALL EKI+A ++I +
Sbjct: 1 TKQAEGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWV 60
Query: 119 GDESKRVDFLGRGMLPIEIDQFGVNKTLS 147
DESK VD LG LP+E+ + +S
Sbjct: 61 VDESKMVDQLGAFKLPVELFNMALIACIS 89
>gi|213024671|ref|ZP_03339118.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 53
Score = 71.5 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 179 YIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
I+D + I DP + + IPGV+ GLF N D A+IGT DG +++
Sbjct: 1 MILDVYGMEILDPIALENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 53
>gi|12054914|emb|CAC21179.1| putative ribose-5P-isomerase 2 [Streptococcus thermophilus]
Length = 57
Score = 71.5 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
N+I+D G I +P + EL + GV+EHGLF MV+ I+ DG +V K
Sbjct: 3 NFIIDLDLGKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKIVEVK 56
>gi|156090868|ref|XP_001612335.1| ribose 5-phosphate epimerase [Plasmodium vivax SaI-1]
gi|148801137|gb|EDL42542.1| ribose 5-phosphate epimerase, putative [Plasmodium vivax]
Length = 89
Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD 79
MT+G+GTG+T + + + NG V IP+S +TE + IPL + + S +D
Sbjct: 1 MTIGLGTGTTVFYVLERIEKLMRNGKITNVVCIPTSIDTEIKARNLGIPLTTLKKNSHID 60
Query: 80 LSIDGFDEIDSRLRLIKGYGGA 101
++IDG DEID L L+KG GGA
Sbjct: 61 IAIDGADEIDMDLNLVKGRGGA 82
>gi|289810449|ref|ZP_06541078.1| ribose 5-phosphate isomerase, constitutive [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 33
Score = 65.7 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAK 33
M ++K+ A+QYV G +G+GTGSTA
Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAA 33
>gi|62822229|gb|AAY14778.1| unknown [Homo sapiens]
Length = 60
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRN 57
M A + K+ A R A++ +V + LG+G+GST + +A+++ + IP+S
Sbjct: 1 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 60
>gi|255638258|gb|ACU19442.1| unknown [Glycine max]
Length = 89
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 107 IIAHAASRFIVIGDESKRVDFLGRG--MLPIEIDQFGVNKTLSALKEVASCFGLNEELRL 164
++ A +FIVI DESK V++LG +P+E+ +F T + L+++ G RL
Sbjct: 1 MVEGACKKFIVIVDESKLVNYLGGSGLAMPVEVIKFCWRFTAARLQKLFEEAGC--VARL 58
Query: 165 R----RNGSGLFVSDGGNYIVDAFFGF 187
R + +V+D GN+IVD +F
Sbjct: 59 RTFGEKEKEEPYVTDNGNFIVDLYFER 85
>gi|159485516|ref|XP_001700790.1| ribose-5 phosphate isomerase-related protein [Chlamydomonas
reinhardtii]
gi|158281289|gb|EDP07044.1| ribose-5 phosphate isomerase-related protein [Chlamydomonas
reinhardtii]
Length = 291
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 81/228 (35%), Gaps = 33/228 (14%)
Query: 3 ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTE 59
K A R + +V + +G+G + L ++A G V +P+
Sbjct: 37 VDAAKLAAVRECVDRFVTSNSVVALGSGEMVNLAIEELGRRLAIGSLQNVVGVPACDVAA 96
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGA---------LLREKIIA 109
+ H +PL + +++ D +D + + G LLR A
Sbjct: 97 HEAAFHGVPLLPEAREAEATVALAEADMVDVAARAALLGCAADAPQQPDVPRLLRVLKKA 156
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR---- 165
+ +R +++ + V LG G LP+ G +E+ F + EL R
Sbjct: 157 GSGARLVLLTSADRVVKRLG-GSLPV---WIGAEGWEEWAEELDDVFLGDAELWRRSASG 212
Query: 166 -----RNGSGLFVSDGGNYIVDAF-------FGFIPDPQIISGELCNI 201
R G +VS GN IVD FG + I+ E+ I
Sbjct: 213 QPENPRGGDMPYVSPDGNTIVDVRFYEGLKLFGEDDEYGKIADEISAI 260
>gi|295094535|emb|CBK83626.1| Transcriptional regulators of sugar metabolism [Coprococcus sp.
ART55/1]
Length = 254
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 1 MDA-----LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
MD +++K AR+A++YV DG T+ + +GSTA F + L + + V S
Sbjct: 68 MDVRGTSNMELKEQIARKALEYVKDGDTIAIDSGSTASLFAMALKARKFDSLSVITYSSE 127
Query: 56 RNT 58
+
Sbjct: 128 VFS 130
>gi|239616568|ref|YP_002939890.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
gi|239505399|gb|ACR78886.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
Length = 256
Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 23/155 (14%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+A + K+ A++A+ +V DG ++ + +GSTA L+ G +V + R TE
Sbjct: 77 MNAEE-KKRIAQKAVNFVEDGDSIIIDSGSTAFYMAKYLSK--KRGIKVISVD-IRVTEE 132
Query: 61 FCKIHHIPLHSPEDVSSVDLS-------------------IDGFDEIDSRLRLIKGYGGA 101
K I + + D ID +
Sbjct: 133 LAKNPDIETYIIGGIVRPGYYSIGGELAVETIKNFSVEKVFLTVDAIDLENGITNSSMFE 192
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ ++ + +A I++ D SK + PIE
Sbjct: 193 VYVKRALINAGKTVILLADSSKIGKKAFVKVAPIE 227
>gi|255078236|ref|XP_002502698.1| ribose 5-phosphate isomerase [Micromonas sp. RCC299]
gi|226517963|gb|ACO63956.1| ribose 5-phosphate isomerase [Micromonas sp. RCC299]
Length = 328
Score = 58.4 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 86/250 (34%), Gaps = 42/250 (16%)
Query: 8 RNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENFCKI 64
R A + +V G +G+G G + + D++A+ VQ +P+ T +
Sbjct: 58 RKCAIAFVDRHVSSGDRVGIGAGPMVSLVLAEIHDRLADSRLDDVQAVPTGTLTAKEAAV 117
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEI-------DSRLRLIKGYG-----GALLREKIIAHAA 112
+P+ S E+V +VD+ + DE + I G L+ + + +
Sbjct: 118 AGVPVTSLENVPAVDVCVLQADEAVTYRSEKSPGIAAIVGREQRPVQPDLILTRKVIRKS 177
Query: 113 SRFIVIGDESKRVDFLGRGMLPIEID--QFGVNKTLSALKE------VASCFGLNEELRL 164
+ +++ G +P+ I Q + L + G E
Sbjct: 178 VKVVLLVSALGD-PVPLGGSVPVAIVGGQSEWEECAEELDDIFLGDADVWRRGAEVEANP 236
Query: 165 RRNGSGLFVSDGGNYIVDAFFGFIPD-----------------PQIISGELCNIPGVIEH 207
R + +DG + IVD F + P I+ E+ + GV+ H
Sbjct: 237 RGGKAPYLSADGVHTIVDLRFNDPLNDGERWDDGFQLFGSAATPYQIAAEVETVDGVLAH 296
Query: 208 GLFINMVDCA 217
G+ D
Sbjct: 297 GIVTQ-ADSV 305
>gi|297519645|ref|ZP_06938031.1| ribose-5-phosphate isomerase A [Escherichia coli OP50]
Length = 39
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 193 IISGELCNIPGVIEHGLFINM-VDCAIIGTSDGECLVLQ 230
+ + IPGV+ GLF N D A+IGT DG +++
Sbjct: 1 AMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK 39
>gi|134102750|ref|YP_001108411.1| DeoR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|291009442|ref|ZP_06567415.1| DeoR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|133915373|emb|CAM05486.1| putative DeoR-family transcriptional regulator [Saccharopolyspora
erythraea NRRL 2338]
Length = 260
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 24/142 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-------------------IANGF 47
K+ + A + V GM +G+ G+T E LA + IAN
Sbjct: 78 KQRISNAAARMVQPGMVIGLNGGTTTTEVARCLATRADLGEQGDPGLTVVTNALNIANEL 137
Query: 48 ----RVQVIPSSRNTENFCKIHHIP-LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++++ + P + ++DL G D ID + + G
Sbjct: 138 VVRPHIKIVVTGGVARQQSFELTGPLATRILEEITIDLLFLGVDAIDPAMGAYAHHEGEA 197
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+++A A+R +V+ D SK
Sbjct: 198 SINRLMASRAARVVVVADSSKL 219
>gi|297712179|ref|XP_002832670.1| PREDICTED: ribose-5-phosphate isomerase-like, partial [Pongo
abelii]
Length = 115
Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 1 MD-ALQMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILL 39
M A + K+ A R A++ +V + LG+G+GST + +
Sbjct: 75 MSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRI 115
>gi|330470418|ref|YP_004408161.1| DeoR family transcriptional regulator [Verrucosispora maris
AB-18-032]
gi|328813389|gb|AEB47561.1| transcriptional regulator, deor family protein [Verrucosispora
maris AB-18-032]
Length = 261
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 25/154 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----ANGFRVQVIPSSRN-TEN 60
K+ A V G +G+ G+T+ E LA + A G ++ V+ ++ N
Sbjct: 78 KQRIGAAAAALVTPGTVVGLNGGTTSTEVARALAVRPDLNTNAEGAQLTVVTNALNIANE 137
Query: 61 FCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGYGGA 101
+ + V +D+++ G D ID L + G
Sbjct: 138 LLVRSRMKVVVAGGVVRPKSFELVGPLGGALLREVTLDVALLGVDAIDPHLGAAAHHEGE 197
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ A R ++I D SK + P+
Sbjct: 198 AAMNNLMVARAKRVVIIADSSKLGGHAFARICPV 231
>gi|218283916|ref|ZP_03489784.1| hypothetical protein EUBIFOR_02380 [Eubacterium biforme DSM 3989]
gi|218215495|gb|EEC89033.1| hypothetical protein EUBIFOR_02380 [Eubacterium biforme DSM 3989]
Length = 255
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+MK+ A A + +GM + + +GST + L N + ++ +S C
Sbjct: 78 EMKKIVALEAFSRIENGMIVYLDSGSTILTAISAL----RNKSDITIVTNSILVAYECAN 133
Query: 65 HHIPLH-------------------SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
++ + D S+DL+I G D + L
Sbjct: 134 MNLNIIMAGGLLFNIGKRTYGHFATEIIDHLSIDLAIMGTDAFTEKSHGFTTISADELGF 193
Query: 106 KIIAHA-ASRFIVIGDESKR 124
K +++ I+I D SK
Sbjct: 194 KRHVMNQSAKKIMISDASKV 213
>gi|330720046|gb|EGG98475.1| Ribose 5-phosphate isomerase A [gamma proteobacterium IMCC2047]
Length = 52
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 183 AFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIGTSDGEC 226
I + + ++ I GV+ +GLF ++ +GE
Sbjct: 1 MHNIEINNAIELEQKINAIVGVVCNGLFAARPADLLLVGKEGEV 44
>gi|238061369|ref|ZP_04606078.1| DeoR family transcriptional regulator [Micromonospora sp. ATCC
39149]
gi|237883180|gb|EEP72008.1| DeoR family transcriptional regulator [Micromonospora sp. ATCC
39149]
Length = 261
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 25/154 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----ANGFRVQVIPSSRN-TEN 60
K+ A V G +G+ G+T+ E LA + A G ++ V+ ++ N
Sbjct: 78 KQRIGAAAAALVSPGTVVGLNGGTTSTEVARALAVRPDLNTSAEGAQLTVVTNALNIANE 137
Query: 61 FCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGYGGA 101
+ + V +D+++ G D ID +L + G
Sbjct: 138 LLVRSRMKVVVAGGVVRPKSFELVGPLGGALLREVTLDVALLGVDAIDPQLGAAAHHEGE 197
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ A R ++I D SK + P+
Sbjct: 198 AAMNNLMVARAKRVVIIADSSKLGGHAFARICPV 231
>gi|288933428|ref|YP_003437487.1| DeoR family transcriptional regulator [Klebsiella variicola At-22]
gi|290511521|ref|ZP_06550890.1| galactitol utilization operon repressor [Klebsiella sp. 1_1_55]
gi|288888157|gb|ADC56475.1| transcriptional regulator, DeoR family [Klebsiella variicola At-22]
gi|289776514|gb|EFD84513.1| galactitol utilization operon repressor [Klebsiella sp. 1_1_55]
Length = 257
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A+ + +GMT+ + +GST L +A + +
Sbjct: 84 KKRIAQAAVAMIREGMTVILDSGSTTLLIAEALVRMTNITVITNSLPAAFTLAENKDITL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 144 VVCGGTVRHKTHSMHGTIAERSLQGICADLMFVGADGIDATNG----ITTFNEGYSISSV 199
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+A AA + I + D SK +LP+E
Sbjct: 200 MAAAAHQVIAVLDASKFNRRGFNQVLPME 228
>gi|145592814|ref|YP_001157111.1| DeoR family transcriptional regulator [Salinispora tropica CNB-440]
gi|145302151|gb|ABP52733.1| transcriptional regulator, DeoR family [Salinispora tropica
CNB-440]
Length = 261
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 25/154 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----ANGFRVQVIPSSRN-TEN 60
K+ A V G +G+ G+T+ E LA + A G ++ V+ ++ N
Sbjct: 78 KQRIGAAAAALVSPGTVVGLNGGTTSTEVARALAVRPDLNTSAEGAQLTVVTNALNIANE 137
Query: 61 FCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGYGGA 101
+ + V +D+++ G D +D +L + G
Sbjct: 138 LLVRSRMKVVVAGGVVRPKSFELVGPLGGALLREVTLDVALLGVDAVDPQLGAAAHHEGE 197
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ A R +VI D SK + P+
Sbjct: 198 AAMNSLMVARAKRVVVIADSSKLGGHAFARICPV 231
>gi|159035958|ref|YP_001535211.1| DeoR family transcriptional regulator [Salinispora arenicola
CNS-205]
gi|157914793|gb|ABV96220.1| transcriptional regulator, DeoR family [Salinispora arenicola
CNS-205]
Length = 261
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 25/154 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----ANGFRVQVIPSSRN-TEN 60
K+ A V G +G+ G+T+ E LA + A G ++ V+ ++ N
Sbjct: 78 KQRIGAAAAALVSPGTVVGLNGGTTSTEVARALAVRPDLNTNAEGAQLTVVTNALNIANE 137
Query: 61 FCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGYGGA 101
+ + V +D+++ G D +D +L + G
Sbjct: 138 LLVRSRMKVVVAGGVVRPKSFELVGPLGGALLREVTLDVALLGVDAVDPQLGAAAHHEGE 197
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ A R +VI D SK + P+
Sbjct: 198 AAMNSLMVARAKRVVVIADSSKLGGHAFARICPV 231
>gi|315503502|ref|YP_004082389.1| transcriptional regulator, deor family [Micromonospora sp. L5]
gi|315410121|gb|ADU08238.1| transcriptional regulator, DeoR family [Micromonospora sp. L5]
Length = 261
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 25/154 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----ANGFRVQVIPSSRN-TEN 60
K+ A V G +G+ G+T+ E LA + A G ++ V+ ++ N
Sbjct: 78 KQRIGAAAAALVSPGTVVGLNGGTTSTEVARALAVRPDLNTSAEGAQLTVVTNALNIANE 137
Query: 61 FCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGYGGA 101
+ + V +D+++ G D ID +L + G
Sbjct: 138 LLVRSRMKVVVAGGVVRPKSFELVGPLGGALLREVTLDVALLGVDAIDPQLGAAAHHEGE 197
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ A R +VI D SK + P+
Sbjct: 198 AAMNSLMVARAKRVVVIADSSKLGGHAFARICPV 231
>gi|302870220|ref|YP_003838857.1| regulatory protein DeoR [Micromonospora aurantiaca ATCC 27029]
gi|302573079|gb|ADL49281.1| regulatory protein DeoR [Micromonospora aurantiaca ATCC 27029]
Length = 261
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 25/154 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----ANGFRVQVIPSSRN-TEN 60
K+ A V G +G+ G+T+ E LA + A G ++ V+ ++ N
Sbjct: 78 KQRIGTAAAALVSPGTVVGLNGGTTSTEVARALAVRPDLNTSAEGAQLTVVTNALNIANE 137
Query: 61 FCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGYGGA 101
+ + V +D+++ G D ID +L + G
Sbjct: 138 LLVRSRMKVVVAGGVVRPKSFELVGPLGGALLREVTLDVALLGVDAIDPQLGAAAHHEGE 197
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ A R +VI D SK + P+
Sbjct: 198 AAMNSLMVARAKRVVVIADSSKLGGHAFARICPV 231
>gi|325479696|gb|EGC82786.1| transcriptional regulator, DeoR family [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 229
Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 30/146 (20%)
Query: 2 DALQM-----KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
D ++ KR A++A V D M + + GST + L G ++V+
Sbjct: 68 DTNELTNPTSKREIAKKAASLVEDKMVIFLDGGSTCNLVIDYL-----RGKDIRVVTHGL 122
Query: 57 NTENFCKIHHIPLHSPE-------------------DVSSVDLSIDGFDEIDSRLRLIKG 97
++IP S D++ G + D
Sbjct: 123 MHMAKLMENNIPTTLLGGDIKVKTKVNLGLVTLDQLSNYSFDIAFLGANGYDKDYYYTAD 182
Query: 98 YGGALLREKIIAHAASRFIVIGDESK 123
A+L +K A + + ++ D SK
Sbjct: 183 INEAIL-KKTAAKLSEKAYILADSSK 207
>gi|16762029|ref|NP_457646.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143518|ref|NP_806860.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415197|ref|YP_152272.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62181773|ref|YP_218190.1| transcriptional regulator of sugar metabolism [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|167552089|ref|ZP_02345842.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168231871|ref|ZP_02656929.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237964|ref|ZP_02663022.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168243098|ref|ZP_02668030.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168262726|ref|ZP_02684699.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|194445084|ref|YP_002042522.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194450336|ref|YP_002047294.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194468740|ref|ZP_03074724.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194735688|ref|YP_002116214.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197265766|ref|ZP_03165840.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364127|ref|YP_002143764.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|200387382|ref|ZP_03213994.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204928358|ref|ZP_03219558.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|213163544|ref|ZP_03349254.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213427820|ref|ZP_03360570.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582516|ref|ZP_03364342.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|224585060|ref|YP_002638859.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238910059|ref|ZP_04653896.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|25302839|pir||AB0899 galactitol utilization operon repressor [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504332|emb|CAD07784.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139152|gb|AAO70720.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129454|gb|AAV78960.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129406|gb|AAX67109.1| transcriptional regulator of sugar metabolism [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|194403747|gb|ACF63969.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408640|gb|ACF68859.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194455104|gb|EDX43943.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711190|gb|ACF90411.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197095604|emb|CAR61171.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197244021|gb|EDY26641.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289162|gb|EDY28531.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199604480|gb|EDZ03025.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204322680|gb|EDZ07877.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205323248|gb|EDZ11087.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205333875|gb|EDZ20639.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205337779|gb|EDZ24543.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205348351|gb|EDZ34982.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224469588|gb|ACN47418.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|322615269|gb|EFY12190.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618372|gb|EFY15263.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622823|gb|EFY19667.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626856|gb|EFY23653.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631425|gb|EFY28185.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635309|gb|EFY32023.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643444|gb|EFY40007.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647120|gb|EFY43621.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648924|gb|EFY45369.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655115|gb|EFY51426.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657718|gb|EFY53986.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664214|gb|EFY60412.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667498|gb|EFY63660.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674746|gb|EFY70838.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675622|gb|EFY71695.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682258|gb|EFY78281.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684861|gb|EFY80859.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322716259|gb|EFZ07830.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323191744|gb|EFZ76996.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199052|gb|EFZ84149.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204249|gb|EFZ89258.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207596|gb|EFZ92543.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211351|gb|EFZ96195.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214707|gb|EFZ99456.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221186|gb|EGA05612.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224073|gb|EGA08366.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230279|gb|EGA14398.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233255|gb|EGA17349.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239292|gb|EGA23342.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242458|gb|EGA26484.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246967|gb|EGA30933.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254100|gb|EGA37920.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255217|gb|EGA38994.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262680|gb|EGA46236.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323263990|gb|EGA47498.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269376|gb|EGA52831.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 257
Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A V +GMT+ + +GST LA K ++ + +
Sbjct: 84 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 144 VVCGGTVRHKTHSMHGTIAERSLHGISADVMFVGADGIDATNG----ITTFNEGYSISGV 199
Query: 108 IAHAASRFIVIGDESKR 124
+A AA + I + D +K
Sbjct: 200 MAAAAHKVIAVLDATKF 216
>gi|168819667|ref|ZP_02831667.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|197249109|ref|YP_002148189.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212812|gb|ACH50209.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|205343454|gb|EDZ30218.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320087710|emb|CBY97474.1| Uncharacterized HTH-type transcriptional regulator ygbI [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 257
Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A V +GMT+ + +GST LA K ++ + +
Sbjct: 84 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 144 VVCGGTVRHKTHSMHGTIAERSLHGISADVMFVGADGIDATNG----ITTFNEGYSISGV 199
Query: 108 IAHAASRFIVIGDESKR 124
+A AA + I + D +K
Sbjct: 200 MAAAAHKVIAVLDATKF 216
>gi|161616267|ref|YP_001590232.1| hypothetical protein SPAB_04072 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161365631|gb|ABX69399.1| hypothetical protein SPAB_04072 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 257
Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A V +GMT+ + +GST LA K ++ + +
Sbjct: 84 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 144 VVCGGTVRHKTHSMHGTIAERSLHGISADVMFVGADGIDATNG----ITTFNEGYSISGV 199
Query: 108 IAHAASRFIVIGDESKR 124
+A AA + I + D +K
Sbjct: 200 MAAAAHKVIAVLDATKF 216
>gi|168463514|ref|ZP_02697431.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195633497|gb|EDX51911.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
Length = 257
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A V +GMT+ + +GST LA K ++ + +
Sbjct: 84 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 144 VVCGGTVRHKTYSMHGTIAERSLHGISADVMFVGADGIDATNG----ITTFNEGYSISGV 199
Query: 108 IAHAASRFIVIGDESKR 124
+A AA + I + D +K
Sbjct: 200 MAAAAHKVIAVLDATKF 216
>gi|213420825|ref|ZP_03353891.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 216
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A V +GMT+ + +GST LA K ++ + +
Sbjct: 43 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTL 102
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 103 VVCGGTVRHKTHSMHGTIAERSLHGISADVMFVGADGIDATNG----ITTFNEGYSISGV 158
Query: 108 IAHAASRFIVIGDESKR 124
+A AA + I + D +K
Sbjct: 159 MAAAAHKVIAVLDATKF 175
>gi|152972068|ref|YP_001337214.1| putative DEOR-type transcriptional regulator [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238896651|ref|YP_002921396.1| putative DeoR-type transcriptional regulator [Klebsiella pneumoniae
NTUH-K2044]
gi|329997891|ref|ZP_08302941.1| transcriptional regulator, DeoR family [Klebsiella sp. MS 92-3]
gi|150956917|gb|ABR78947.1| putative DEOR-type transcriptional regulator [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238548978|dbj|BAH65329.1| putative DeoR-type transcriptional regulator [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|328538877|gb|EGF64942.1| transcriptional regulator, DeoR family [Klebsiella sp. MS 92-3]
Length = 257
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A A + +GMT+ + +GST L +A + +
Sbjct: 84 KKRIAHAAAAMIREGMTVILDSGSTTLLIAEALVRMTNITVITNSLPAAFTLAENKDITL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 144 VVCGGTVRHKTHSMHGTIAERSLQGICADLMFVGADGIDATNG----ITTFNEGYSISSV 199
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+A AA + I + D SK +LP+E
Sbjct: 200 MAAAAHQVIAVLDASKFNRRGFNQVLPME 228
>gi|294791447|ref|ZP_06756604.1| transcriptional regulator, DeoR family [Scardovia inopinata F0304]
gi|294457918|gb|EFG26272.1| transcriptional regulator, DeoR family [Scardovia inopinata F0304]
Length = 264
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
+K+ A +A++YV G + +G GSTA F L + +
Sbjct: 84 LKQAIALKAVEYVSPGDVIAIGGGSTAYVFAQTLLESFRS 123
>gi|163841784|ref|YP_001626189.1| DeoR family transcriptional regulator [Renibacterium salmoninarum
ATCC 33209]
gi|162955260|gb|ABY24775.1| transcriptional regulator, DeoR family [Renibacterium salmoninarum
ATCC 33209]
Length = 255
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 15/137 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF- 61
L KR AR A+ V GMT+ +G G+T L I ++
Sbjct: 65 QLDAKRAIAREALSLVEPGMTIALGGGTTTYHLATCLGQIDQLTIITNSIKAAEALHQLP 124
Query: 62 ----------CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ L P V++++ + ++G L E A
Sbjct: 125 SQPAVIVTGGERTPSEALVGPLSVAAINTLNVDICFLGVHGIHMRGLSSPNLAEAQTNAA 184
Query: 112 ----ASRFIVIGDESKR 124
+ R +V+ D SK
Sbjct: 185 FIEFSGRLVVLTDHSKF 201
>gi|323701526|ref|ZP_08113199.1| transcriptional regulator, DeoR family [Desulfotomaculum
nigrificans DSM 574]
gi|323533535|gb|EGB23401.1| transcriptional regulator, DeoR family [Desulfotomaculum
nigrificans DSM 574]
Length = 253
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 16/148 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRN-- 57
+ KR + A + DG + + +G+T +E + + + I N ++ + S
Sbjct: 77 EEKRRIGQEAATLIKDGQVIILDSGTTTREIVRGIKNLNDLTVITNDLKIALELSETTDF 136
Query: 58 ---------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + VD++ G ID + + +K +
Sbjct: 137 KVFCTGGLVQNRLGAMLGSTGENFLAGIRVDITFLGASAIDLKWGMTSPNLDKASMKKKM 196
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIE 136
AA R +++ D +K + P+E
Sbjct: 197 MAAADRVVLVADHTKFGKKSFAQIAPVE 224
>gi|302336058|ref|YP_003801265.1| transcriptional regulator, DeoR family [Olsenella uli DSM 7084]
gi|301319898|gb|ADK68385.1| transcriptional regulator, DeoR family [Olsenella uli DSM 7084]
Length = 267
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 28/162 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
K ARRA +YV DG T+G+ G+T EF LADK + ++ + + + H
Sbjct: 89 KERIARRAAEYVRDGDTIGIDAGTTTLEFTKRLADK----RDIAIVTNDFAIAEYVEDHL 144
Query: 66 --------------------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ ++ VD + + + Y L +
Sbjct: 145 PDAELVVLGGTFRRNHRYAFGRLTSACLEMLHVDKAFLAANAFLPNQGFMTEYEPMALVK 204
Query: 106 KIIAHAASRFIVIGDESKR--VDFLGRGMLP-IEIDQFGVNK 144
+ A V+ D SK F+ LP I++ V+
Sbjct: 205 SELIAHARTSYVLMDASKVGASSFIRFAELPDIDVIVMDVDP 246
>gi|16766560|ref|NP_462175.1| galactitol utilization operon transcriptional repressor [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167990174|ref|ZP_02571274.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|198244861|ref|YP_002217236.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205354166|ref|YP_002227967.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858512|ref|YP_002245163.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|16421820|gb|AAL22134.1| transcriptional regulator of sugar metabolism [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|197939377|gb|ACH76710.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205273947|emb|CAR38952.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205331147|gb|EDZ17911.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|206710315|emb|CAR34673.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248428|emb|CBG26265.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995458|gb|ACY90343.1| galactitol utilization operon transcriptional repressor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301159812|emb|CBW19331.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914288|dbj|BAJ38262.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225948|gb|EFX51002.1| Galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323131622|gb|ADX19052.1| galactitol utilization operon transcriptional repressor [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|326625013|gb|EGE31358.1| galactitol utilization operon transcriptional repressor [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
gi|326629287|gb|EGE35630.1| galactitol utilization operon transcriptional repressor [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
gi|332990120|gb|AEF09103.1| galactitol utilization operon transcriptional repressor [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 257
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A V +GMT+ + +GST LA K ++ + +
Sbjct: 84 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I + +
Sbjct: 144 VVCGGTVRHKTHSMHGTIAERSLHGISADLMFVGADGIDATNG----ITTFNEGYSISGV 199
Query: 108 IAHAASRFIVIGDESKR 124
+A AA + I + D +K
Sbjct: 200 MAAAAHKVIAVLDATKF 216
>gi|315226141|ref|ZP_07867929.1| DeoR family transcriptional regulator [Parascardovia denticolens
DSM 10105]
gi|315120273|gb|EFT83405.1| DeoR family transcriptional regulator [Parascardovia denticolens
DSM 10105]
Length = 264
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+K A++A+ +V G + +G GST F LL +
Sbjct: 84 LKEKIAKKALDFVSPGDVIAIGGGSTTYAFAQLLLESPR 122
>gi|294786558|ref|ZP_06751812.1| transcriptional regulator, DeoR family [Parascardovia denticolens
F0305]
gi|294485391|gb|EFG33025.1| transcriptional regulator, DeoR family [Parascardovia denticolens
F0305]
Length = 274
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+K A++A+ +V G + +G GST F LL +
Sbjct: 94 LKEKIAKKALDFVSPGDVIAIGGGSTTYAFAQLLLESPR 132
>gi|332289612|ref|YP_004420464.1| DNA-bindng transcriptional repressor SrlR [Gallibacterium anatis
UMN179]
gi|330432508|gb|AEC17567.1| DNA-bindng transcriptional repressor SrlR [Gallibacterium anatis
UMN179]
Length = 257
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 24/150 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK--------------------IANG 46
K+ A+ A++ + +G +L + +GST + + L++ N
Sbjct: 82 KKQIAKAAVKLLKNGDSLIIDSGSTVLQMIPYLSELNNLTIMTNSLHIINSLVALEKDNE 141
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + +F I + + DGFD + + K
Sbjct: 142 LLMCGGTFRSKSASFHGILAESTFEKFSFDKLFIGTDGFDLELG----LTTFNEVHGVSK 197
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ +AA + IV+ D SK + P+E
Sbjct: 198 AMTNAAKQIIVLADSSKFGRRSPNIVCPLE 227
>gi|157364270|ref|YP_001471037.1| DeoR family transcriptional regulator [Thermotoga lettingae TMO]
gi|157314874|gb|ABV33973.1| transcriptional regulator, DeoR family [Thermotoga lettingae TMO]
Length = 254
Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ AR A++ V +G T+ + +G+T F +L + G R+ +
Sbjct: 80 EEKKKIARMALKLVENGDTIFLDSGTTVYYFAKML--RSKRGLRIVTVDVRIA------- 130
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
S + + +I E+ I G A E + A + + D
Sbjct: 131 -----ESLAEQPQIK-TIVACGEVRPGYYSIGG---AETVEFLEAFRTDKAFIAAD 177
>gi|291303649|ref|YP_003514927.1| DeoR family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290572869|gb|ADD45834.1| transcriptional regulator, DeoR family [Stackebrandtia nassauensis
DSM 44728]
Length = 261
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 25/157 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A V GM +G+ G+T E LA + P + T
Sbjct: 76 EEKHRIGSAAAGLVSSGMVVGLNGGTTITEVARALAMRTDLVATSGTTPLTIVTNALNIA 135
Query: 65 HHIPLHSPEDVSS-------------------------VDLSIDGFDEIDSRLRLIKGYG 99
+ + + V +D+ G D ID +L +
Sbjct: 136 NEMIVRPHIKVVVVGGVVRPQSYELIGPLAAPILREITLDMVFLGVDAIDVKLGATAHHE 195
Query: 100 GALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
G +++A A + ++I D SK + PIE
Sbjct: 196 GEAAINQLMAARARKVVIIADGSKLGGHAFARICPIE 232
>gi|329296098|ref|ZP_08253434.1| galactitol utilization operon repressor [Plautia stali symbiont]
Length = 258
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 23/148 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
KR A A V +G T+ + +GST K L + ++ + +
Sbjct: 85 KRRIAAAAANLVREGDTIILDSGSTTKLLAEELLGRTNITVITNNLAAAYVLSENKDITL 144
Query: 52 IPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D I + +
Sbjct: 145 VVCGGTLRHKTVSLHGSLAEYALRDVTANIMFVGADGLD----GQNGITTFNEGYAISAV 200
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPI 135
+A AA++ +V+ D SK +LPI
Sbjct: 201 MASAANQVVVVTDSSKFSRKGFNTVLPI 228
>gi|308235046|ref|ZP_07665783.1| DeoR family transcriptional regulator [Gardnerella vaginalis ATCC
14018]
gi|311114305|ref|YP_003985526.1| DeoR family transcriptional regulator [Gardnerella vaginalis ATCC
14019]
gi|310945799|gb|ADP38503.1| DeoR family transcriptional regulator [Gardnerella vaginalis ATCC
14019]
Length = 266
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-KIANGFRV 49
MD + +K A +A+ YV G + +G G+TA F L + + A+G +
Sbjct: 74 MD-MGLKDAIASKAVDYVQPGDVIAIGGGTTAYVFAQHLLESRRASGITI 122
>gi|30063529|ref|NP_837700.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
2457T]
gi|30041782|gb|AAP17509.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
2457T]
Length = 259
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I + +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISEA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|297561316|ref|YP_003680290.1| DeoR family transcriptional regulator [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296845764|gb|ADH67784.1| transcriptional regulator, DeoR family [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 261
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 25/156 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA-------DKIANGFRVQVIPSSRN 57
+ K A+ V G +G+ G+T + LA + G V +
Sbjct: 76 EEKERIAQAIADLVPPGSVVGLNGGTTTTQVARALALHESFRGEDPGRGLTVVTSALNIA 135
Query: 58 TENFC------------------KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYG 99
TE ++ + S+++++ G D + + + +
Sbjct: 136 TELLVRPHIKVVVVGGVVRPRSYELVGPLAERVLETLSLNVAVIGADAVGADIGAMAFDE 195
Query: 100 GALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++A A R IV D K +LP+
Sbjct: 196 DEAAANTLLARRAERVIVAADSHKIGQRAFARILPV 231
>gi|170735439|ref|YP_001774553.1| DeoR family transcriptional regulator [Burkholderia cenocepacia
MC0-3]
gi|169821477|gb|ACA96058.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia
MC0-3]
Length = 268
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------IAN 45
+ + K A A +V DG T+ + G+T LLA + +++
Sbjct: 73 SSQEQKEAIAHAASSFVEDGDTVFLDGGTTTAALARLLAGRTDVHVVTNNLLVVSPLVSS 132
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
G V VI + + + + + + SVD + G D + + L L + +
Sbjct: 133 GVHVTVIGGDVRSSSMSTLGPLAQIALSRL-SVDKAFLGADGVVAELGLCEASSEQSYLK 191
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + A+ V+ K + P+E
Sbjct: 192 ECVMRQAAEVFVLVTADKLGRASQQHWTPLE 222
>gi|116686676|ref|YP_839923.1| DeoR family transcriptional regulator [Burkholderia cenocepacia
HI2424]
gi|116652391|gb|ABK13030.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia
HI2424]
Length = 268
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------IAN 45
+ + K A A +V DG T+ + G+T LLA + +++
Sbjct: 73 SSQEQKEAIAHAASSFVEDGDTVFLDGGTTTAALARLLAGRTDVHVVTNNLLVVSPLVSS 132
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
G V VI + + + + + + SVD + G D + + L L + +
Sbjct: 133 GVHVTVIGGDVRSSSMSTLGPLAQIALSRL-SVDKAFLGADGVVAELGLCEASSEQSYLK 191
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + A+ V+ K + P+E
Sbjct: 192 ECVMRQAAEVFVLVTADKLGRASQQHWTPLE 222
>gi|107023082|ref|YP_621409.1| DeoR family transcriptional regulator [Burkholderia cenocepacia AU
1054]
gi|105893271|gb|ABF76436.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia AU
1054]
Length = 268
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------IAN 45
+ + K A A +V DG T+ + G+T LLA + +++
Sbjct: 73 SSQEQKEAIAHAASSFVEDGDTVFLDGGTTTAALARLLAGRADVHVVTNNLLVVSPLVSS 132
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
G V VI + + + + + + SVD + G D + + L L + +
Sbjct: 133 GVHVTVIGGDVRSSSMSTLGPLAQIALSRL-SVDKAFLGADGVVAELGLCEASSEQSYLK 191
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + A+ V+ K + P+E
Sbjct: 192 ECVMRQAAEVFVLVTADKLGRASQQHWTPLE 222
>gi|29028388|gb|AAO64739.1| GatR2 [Escherichia coli]
Length = 256
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 83 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 142
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 143 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 198
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 199 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 227
>gi|157158546|ref|YP_001463438.1| galactitol utilization operon repressor [Escherichia coli E24377A]
gi|157161574|ref|YP_001458892.1| galactitol utilization operon repressor [Escherichia coli HS]
gi|170019589|ref|YP_001724543.1| DeoR family transcriptional regulator [Escherichia coli ATCC 8739]
gi|187732335|ref|YP_001879795.1| galactitol utilization operon repressor [Shigella boydii CDC
3083-94]
gi|188494187|ref|ZP_03001457.1| galactitol utilization operon repressor [Escherichia coli 53638]
gi|254162102|ref|YP_003045210.1| galactitol utilization operon repressor [Escherichia coli B str.
REL606]
gi|256017742|ref|ZP_05431607.1| Galactitol utilization operon repressor [Shigella sp. D9]
gi|256022224|ref|ZP_05436089.1| Galactitol utilization operon repressor [Escherichia sp. 4_1_40B]
gi|293405559|ref|ZP_06649551.1| galactitol utilization operon repressor [Escherichia coli FVEC1412]
gi|293410448|ref|ZP_06654024.1| galactitol utilization operon repressor [Escherichia coli B354]
gi|293446441|ref|ZP_06662863.1| DeoR family transcriptional regulator [Escherichia coli B088]
gi|297516038|ref|ZP_06934424.1| galactitol utilization operon repressor [Escherichia coli OP50]
gi|298381243|ref|ZP_06990842.1| galactitol utilization operon repressor [Escherichia coli FVEC1302]
gi|306814793|ref|ZP_07448955.1| galactitol utilization operon repressor [Escherichia coli NC101]
gi|157067254|gb|ABV06509.1| galactitol utilization operon repressor [Escherichia coli HS]
gi|157080576|gb|ABV20284.1| galactitol utilization operon repressor [Escherichia coli E24377A]
gi|169754517|gb|ACA77216.1| transcriptional regulator, DeoR family [Escherichia coli ATCC 8739]
gi|187429327|gb|ACD08601.1| galactitol utilization operon repressor [Shigella boydii CDC
3083-94]
gi|188489386|gb|EDU64489.1| galactitol utilization operon repressor [Escherichia coli 53638]
gi|253974003|gb|ACT39674.1| galactitol utilization operon repressor [Escherichia coli B str.
REL606]
gi|291323271|gb|EFE62699.1| DeoR family transcriptional regulator [Escherichia coli B088]
gi|291427767|gb|EFF00794.1| galactitol utilization operon repressor [Escherichia coli FVEC1412]
gi|291470916|gb|EFF13400.1| galactitol utilization operon repressor [Escherichia coli B354]
gi|298278685|gb|EFI20199.1| galactitol utilization operon repressor [Escherichia coli FVEC1302]
gi|305852187|gb|EFM52639.1| galactitol utilization operon repressor [Escherichia coli NC101]
gi|320657517|gb|EFX25315.1| Galactitol utilization operon repressor [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320663333|gb|EFX30638.1| Galactitol utilization operon repressor [Escherichia coli O55:H7
str. USDA 5905]
Length = 257
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 84 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 144 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 199
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 200 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 228
>gi|329937349|ref|ZP_08286907.1| DeoR family transcriptional regulator [Streptomyces
griseoaurantiacus M045]
gi|329303225|gb|EGG47112.1| DeoR family transcriptional regulator [Streptomyces
griseoaurantiacus M045]
Length = 236
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 18/146 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----------------NGFRV 49
K+ AR A + V +G +GM G+T E +LA + +
Sbjct: 62 KQAIARAAAELVPEGAVVGMTGGTTVTEIARVLAARGRVTIVTNAVNIAAEMVPHKNVTL 121
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
V+ S TE++ + I + D D++ G D + + ++
Sbjct: 122 VVVGGSARTESYELVGPIAEKTLADH-HTDVTFLGVDGVGADHGCTTHDQLEAATDRAFL 180
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPI 135
++ R +V+ D SK + P+
Sbjct: 181 ASSDRTVVVADHSKIGRVTFAKICPL 206
>gi|195937859|ref|ZP_03083241.1| split galactitol utilization operon repressor [Escherichia coli
O157:H7 str. EC4024]
gi|261225021|ref|ZP_05939302.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. FRIK2000]
gi|261257632|ref|ZP_05950165.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. FRIK966]
gi|320641315|gb|EFX10775.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. G5101]
gi|320646685|gb|EFX15577.1| galactitol utilization operon repressor [Escherichia coli O157:H-
str. 493-89]
gi|320651962|gb|EFX20320.1| galactitol utilization operon repressor [Escherichia coli O157:H-
str. H 2687]
Length = 257
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 84 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 144 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 199
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 200 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 228
>gi|110806054|ref|YP_689574.1| galactitol utilization operon repressor [Shigella flexneri 5 str.
8401]
gi|110615602|gb|ABF04269.1| Galactitol utilization operon repressor [Shigella flexneri 5 str.
8401]
Length = 257
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 84 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 144 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 199
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 200 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 228
>gi|225869369|ref|YP_002745317.1| DeoR family regulatory protein [Streptococcus equi subsp.
zooepidemicus]
gi|225702645|emb|CAX00719.1| DeoR family regulatory protein [Streptococcus equi subsp.
zooepidemicus]
Length = 248
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 23/150 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + +
Sbjct: 72 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKQNIKIITNSCFIASYIRQYSSCQ 131
Query: 67 I--------------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + S V V + DGFD + +
Sbjct: 132 LILLGGYYQPNSEVTVGPLLKEMISLFHVDRVFVGTDGFDPAIGFMGKDMMRSE---GVR 188
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+A A+ I++ D SK L +E
Sbjct: 189 YMAEASEELIILTDSSKLSKPSLVHQLSLE 218
>gi|323961686|gb|EGB57290.1| deoR family protein regulatory protein [Escherichia coli H489]
Length = 259
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|74312609|ref|YP_311028.1| galactitol utilization operon repressor [Shigella sonnei Ss046]
gi|170682006|ref|YP_001743053.1| galactitol utilization operon repressor [Escherichia coli SMS-3-5]
gi|193062930|ref|ZP_03044023.1| galactitol utilization operon repressor [Escherichia coli E22]
gi|193069243|ref|ZP_03050199.1| galactitol utilization operon repressor [Escherichia coli E110019]
gi|194428888|ref|ZP_03061422.1| galactitol utilization operon repressor [Escherichia coli B171]
gi|194436144|ref|ZP_03068246.1| galactitol utilization operon repressor [Escherichia coli 101-1]
gi|209919550|ref|YP_002293634.1| galactitol utilization operon repressor [Escherichia coli SE11]
gi|218554655|ref|YP_002387568.1| Galactitol utilization operon repressor [Escherichia coli IAI1]
gi|218695709|ref|YP_002403376.1| Galactitol utilization operon repressor [Escherichia coli 55989]
gi|218699320|ref|YP_002406949.1| Galactitol utilization operon repressor [Escherichia coli IAI39]
gi|218705619|ref|YP_002413138.1| Galactitol utilization operon repressor [Escherichia coli UMN026]
gi|260856066|ref|YP_003229957.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O26:H11 str. 11368]
gi|260868795|ref|YP_003235197.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O111:H- str. 11128]
gi|291283336|ref|YP_003500154.1| Galactitol utilization operon repressor [Escherichia coli O55:H7
str. CB9615]
gi|293415375|ref|ZP_06658018.1| DeoR family transcriptional regulator [Escherichia coli B185]
gi|300901297|ref|ZP_07119394.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|300902267|ref|ZP_07120264.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300917077|ref|ZP_07133768.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300923567|ref|ZP_07139598.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300930962|ref|ZP_07146322.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300947812|ref|ZP_07161968.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|301021213|ref|ZP_07185246.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|301304474|ref|ZP_07210585.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|301329908|ref|ZP_07222629.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|301644646|ref|ZP_07244632.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|307314930|ref|ZP_07594520.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|331653516|ref|ZP_08354517.1| galactitol utilization operon repressor [Escherichia coli M718]
gi|331663580|ref|ZP_08364490.1| galactitol utilization operon repressor [Escherichia coli TA143]
gi|331683770|ref|ZP_08384366.1| galactitol utilization operon repressor [Escherichia coli H299]
gi|332278759|ref|ZP_08391172.1| galactitol utilization operon repressor [Shigella sp. D9]
gi|2506565|sp|P36930|GATR_ECOLI RecName: Full=Galactitol utilization operon repressor
gi|73856086|gb|AAZ88793.1| Galactitol utilization operon repressor [Shigella sonnei Ss046]
gi|170519724|gb|ACB17902.1| galactitol utilization operon repressor [Escherichia coli SMS-3-5]
gi|192931573|gb|EDV84174.1| galactitol utilization operon repressor [Escherichia coli E22]
gi|192957376|gb|EDV87823.1| galactitol utilization operon repressor [Escherichia coli E110019]
gi|194413056|gb|EDX29344.1| galactitol utilization operon repressor [Escherichia coli B171]
gi|194424872|gb|EDX40857.1| galactitol utilization operon repressor [Escherichia coli 101-1]
gi|209912809|dbj|BAG77883.1| galactitol utilization operon repressor [Escherichia coli SE11]
gi|218352441|emb|CAU98215.1| Galactitol utilization operon repressor [Escherichia coli 55989]
gi|218361423|emb|CAQ99010.1| Galactitol utilization operon repressor [Escherichia coli IAI1]
gi|218369306|emb|CAR17064.1| Galactitol utilization operon repressor [Escherichia coli IAI39]
gi|218432716|emb|CAR13610.1| Galactitol utilization operon repressor [Escherichia coli UMN026]
gi|226237444|dbj|BAH46966.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O55:H7]
gi|257754715|dbj|BAI26217.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O26:H11 str. 11368]
gi|257765151|dbj|BAI36646.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O111:H- str. 11128]
gi|284922078|emb|CBG35157.1| galactitol utilization operon repressor [Escherichia coli 042]
gi|290763209|gb|ADD57170.1| Galactitol utilization operon repressor [Escherichia coli O55:H7
str. CB9615]
gi|291433023|gb|EFF06002.1| DeoR family transcriptional regulator [Escherichia coli B185]
gi|300355262|gb|EFJ71132.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|300398222|gb|EFJ81760.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|300405629|gb|EFJ89167.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300415644|gb|EFJ98954.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300420175|gb|EFK03486.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300452632|gb|EFK16252.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|300461188|gb|EFK24681.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300840200|gb|EFK67960.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|300844007|gb|EFK71767.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|301077031|gb|EFK91837.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|306905636|gb|EFN36166.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|315061403|gb|ADT75730.1| galactitol utilization operon repressor [Escherichia coli W]
gi|315255401|gb|EFU35369.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 85-1]
gi|323378018|gb|ADX50286.1| transcriptional regulator, DeoR family [Escherichia coli KO11]
gi|323936704|gb|EGB32989.1| deoR family protein Bacterial regulatory protein [Escherichia coli
E1520]
gi|323944904|gb|EGB40969.1| deoR family protein Bacterial regulatory protein [Escherichia coli
H120]
gi|323968219|gb|EGB63628.1| deoR family protein regulatory protein [Escherichia coli M863]
gi|323972925|gb|EGB68123.1| deoR family protein regulatory protein [Escherichia coli TA007]
gi|323977754|gb|EGB72840.1| deoR family protein regulatory protein [Escherichia coli TW10509]
gi|324118067|gb|EGC11966.1| deoR family protein regulatory protein [Escherichia coli E1167]
gi|331048365|gb|EGI20441.1| galactitol utilization operon repressor [Escherichia coli M718]
gi|331059379|gb|EGI31356.1| galactitol utilization operon repressor [Escherichia coli TA143]
gi|331078722|gb|EGI49924.1| galactitol utilization operon repressor [Escherichia coli H299]
gi|332101111|gb|EGJ04457.1| galactitol utilization operon repressor [Shigella sp. D9]
Length = 259
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|24113466|ref|NP_707976.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
301]
gi|194431407|ref|ZP_03063699.1| galactitol utilization operon repressor [Shigella dysenteriae 1012]
gi|24052498|gb|AAN43683.1| galactitol utilization operon repressor [Shigella flexneri 2a str.
301]
gi|194420232|gb|EDX36309.1| galactitol utilization operon repressor [Shigella dysenteriae 1012]
gi|281601531|gb|ADA74515.1| Galactitol utilization operon repressor [Shigella flexneri 2002017]
Length = 259
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|15832147|ref|NP_310920.1| split galactitol utilization operon repressor [Escherichia coli
O157:H7 str. Sakai]
gi|187776162|ref|ZP_02800964.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4196]
gi|188024959|ref|ZP_02775162.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4113]
gi|189010461|ref|ZP_02807426.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4076]
gi|189402292|ref|ZP_02781357.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4401]
gi|189403379|ref|ZP_02795072.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4486]
gi|189404038|ref|ZP_02786839.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4501]
gi|189405228|ref|ZP_02814061.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC869]
gi|189405757|ref|ZP_02823990.2| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC508]
gi|208809345|ref|ZP_03251682.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4206]
gi|208813819|ref|ZP_03255148.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4045]
gi|208820747|ref|ZP_03261067.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4042]
gi|209396656|ref|YP_002271369.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4115]
gi|217329679|ref|ZP_03445758.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. TW14588]
gi|254793913|ref|YP_003078750.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. TW14359]
gi|13362362|dbj|BAB36316.1| split galactitol utilization operon repressor [Escherichia coli
O157:H7 str. Sakai]
gi|187768563|gb|EDU32407.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4196]
gi|188015639|gb|EDU53761.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4113]
gi|189000177|gb|EDU69163.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4076]
gi|189356539|gb|EDU74958.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4401]
gi|189360945|gb|EDU79364.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4486]
gi|189367773|gb|EDU86189.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4501]
gi|189371293|gb|EDU89709.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC869]
gi|189378426|gb|EDU96842.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC508]
gi|208729146|gb|EDZ78747.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4206]
gi|208735096|gb|EDZ83783.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4045]
gi|208740870|gb|EDZ88552.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4042]
gi|209158056|gb|ACI35489.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC4115]
gi|209747906|gb|ACI72260.1| split galactitol utilization operon repressor [Escherichia coli]
gi|209747908|gb|ACI72261.1| split galactitol utilization operon repressor [Escherichia coli]
gi|209747910|gb|ACI72262.1| split galactitol utilization operon repressor [Escherichia coli]
gi|217317447|gb|EEC25876.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. TW14588]
gi|254593313|gb|ACT72674.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. TW14359]
Length = 259
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|320668042|gb|EFX34929.1| galactitol utilization operon repressor [Escherichia coli O157:H7
str. LSU-61]
Length = 257
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 84 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 144 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 199
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 200 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 228
>gi|110642298|ref|YP_670028.1| galactitol utilization operon repressor [Escherichia coli 536]
gi|110343890|gb|ABG70127.1| galactitol utilization operon repressor [Escherichia coli 536]
gi|222033853|emb|CAP76594.1| Galactitol utilization operon repressor [Escherichia coli LF82]
gi|294490347|gb|ADE89103.1| galactitol utilization operon repressor [Escherichia coli IHE3034]
gi|307554159|gb|ADN46934.1| galactitol utilization operon repressor [Escherichia coli ABU
83972]
gi|307626365|gb|ADN70669.1| galactitol utilization operon repressor [Escherichia coli UM146]
gi|312946710|gb|ADR27537.1| Galactitol utilization operon repressor [Escherichia coli O83:H1
str. NRG 857C]
Length = 257
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 84 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 144 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSVSGA 199
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 200 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 228
>gi|195978910|ref|YP_002124154.1| putative HTH-type transcriptional regulator [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225871376|ref|YP_002747323.1| DeoR family regulatory protein [Streptococcus equi subsp. equi
4047]
gi|195975615|gb|ACG63141.1| putative HTH-type transcriptional regulator [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225700780|emb|CAW95451.1| DeoR family regulatory protein [Streptococcus equi subsp. equi
4047]
Length = 248
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 23/150 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + +
Sbjct: 72 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKQNIKIITNSCFIASYIRQYSSCQ 131
Query: 67 I--------------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + S V V + DGFD + +
Sbjct: 132 LILLGGYYQPNSEVTVGPLLKEMISLFHVDRVFVGTDGFDPAIGFMGKDMMRSE---GVR 188
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+A A+ I++ D SK L +E
Sbjct: 189 YMAEASEELIILTDSSKLSKPSLVHQLSLE 218
>gi|301026394|ref|ZP_07189839.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|299879712|gb|EFI87923.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|320199154|gb|EFW73747.1| Galactitol utilization operon repressor [Escherichia coli EC4100B]
Length = 238
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 65 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 124
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 125 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 180
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 181 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 209
>gi|326347036|gb|EGD70769.1| Galactitol utilization operon repressor [Escherichia coli O157:H7
str. 1125]
Length = 244
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 71 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 130
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 131 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 186
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 187 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 215
>gi|320191749|gb|EFW66397.1| Galactitol utilization operon repressor [Escherichia coli O157:H7
str. EC1212]
gi|326338441|gb|EGD62269.1| Galactitol utilization operon repressor [Escherichia coli O157:H7
str. 1044]
Length = 238
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 65 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 124
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 125 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 180
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 181 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 209
>gi|320178020|gb|EFW53001.1| Galactitol utilization operon repressor [Shigella boydii ATCC 9905]
Length = 238
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 65 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 124
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 125 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 180
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 181 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 209
>gi|26248463|ref|NP_754503.1| hypothetical protein c2615 [Escherichia coli CFT073]
gi|82543458|ref|YP_407405.1| galactitol utilization operon repressor [Shigella boydii Sb227]
gi|91211376|ref|YP_541362.1| hypothetical protein UTI89_C2363 [Escherichia coli UTI89]
gi|117624297|ref|YP_853210.1| galactitol utilization operon repressor [Escherichia coli APEC O1]
gi|191167994|ref|ZP_03029795.1| galactitol utilization operon repressor [Escherichia coli B7A]
gi|191170123|ref|ZP_03031677.1| galactitol utilization operon repressor [Escherichia coli F11]
gi|215487312|ref|YP_002329743.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O127:H6 str. E2348/69]
gi|218559009|ref|YP_002391922.1| Galactitol utilization operon repressor [Escherichia coli S88]
gi|227887142|ref|ZP_04004947.1| DeoR family transcriptional regulator [Escherichia coli 83972]
gi|237704547|ref|ZP_04535028.1| galactitol utilization operon repressor [Escherichia sp. 3_2_53FAA]
gi|300818913|ref|ZP_07099118.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|300821808|ref|ZP_07101953.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300978906|ref|ZP_07174419.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|300981653|ref|ZP_07175639.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|301048815|ref|ZP_07195813.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|309792966|ref|ZP_07687394.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|331647738|ref|ZP_08348830.1| galactitol utilization operon repressor [Escherichia coli M605]
gi|331658166|ref|ZP_08359128.1| galactitol utilization operon repressor [Escherichia coli TA206]
gi|331668783|ref|ZP_08369631.1| galactitol utilization operon repressor [Escherichia coli TA271]
gi|331678039|ref|ZP_08378714.1| galactitol utilization operon repressor [Escherichia coli H591]
gi|26108868|gb|AAN81071.1|AE016763_30 Hypothetical protein c2615 [Escherichia coli CFT073]
gi|81244869|gb|ABB65577.1| galactitol utilization operon repressor [Shigella boydii Sb227]
gi|91072950|gb|ABE07831.1| hypothetical protein UTI89_C2363 [Escherichia coli UTI89]
gi|115513421|gb|ABJ01496.1| galactitol utilization operon repressor [Escherichia coli APEC O1]
gi|190901932|gb|EDV61680.1| galactitol utilization operon repressor [Escherichia coli B7A]
gi|190909639|gb|EDV69224.1| galactitol utilization operon repressor [Escherichia coli F11]
gi|215265384|emb|CAS09783.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O127:H6 str. E2348/69]
gi|218365778|emb|CAR03518.1| Galactitol utilization operon repressor [Escherichia coli S88]
gi|226900913|gb|EEH87172.1| galactitol utilization operon repressor [Escherichia sp. 3_2_53FAA]
gi|227835492|gb|EEJ45958.1| DeoR family transcriptional regulator [Escherichia coli 83972]
gi|281179182|dbj|BAI55512.1| galactitol utilization operon repressor [Escherichia coli SE15]
gi|300299400|gb|EFJ55785.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|300307454|gb|EFJ61974.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|300409539|gb|EFJ93077.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|300525650|gb|EFK46719.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300528532|gb|EFK49594.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|308123252|gb|EFO60514.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|315285678|gb|EFU45118.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 110-3]
gi|315294390|gb|EFU53738.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 153-1]
gi|323951885|gb|EGB47759.1| deoR family protein regulatory protein [Escherichia coli H252]
gi|323956124|gb|EGB51876.1| deoR family protein regulatory protein [Escherichia coli H263]
gi|324006432|gb|EGB75651.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 57-2]
gi|324013861|gb|EGB83080.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 60-1]
gi|324019624|gb|EGB88843.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 117-3]
gi|331043462|gb|EGI15600.1| galactitol utilization operon repressor [Escherichia coli M605]
gi|331056414|gb|EGI28423.1| galactitol utilization operon repressor [Escherichia coli TA206]
gi|331063977|gb|EGI35888.1| galactitol utilization operon repressor [Escherichia coli TA271]
gi|331074499|gb|EGI45819.1| galactitol utilization operon repressor [Escherichia coli H591]
Length = 259
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSVSGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|300936607|ref|ZP_07151511.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|300458188|gb|EFK21681.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
Length = 259
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNKIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|260844696|ref|YP_003222474.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O103:H2 str. 12009]
gi|257759843|dbj|BAI31340.1| DNA-binding transcriptional repressor GatR of galactitol
utilization [Escherichia coli O103:H2 str. 12009]
Length = 259
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGAIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|320195957|gb|EFW70581.1| Galactitol utilization operon repressor [Escherichia coli
WV_060327]
gi|330911922|gb|EGH40432.1| galactitol utilization operon repressor [Escherichia coli AA86]
Length = 244
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 71 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 130
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 131 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSVSGA 186
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 187 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 215
>gi|320183724|gb|EFW58562.1| Galactitol utilization operon repressor [Shigella flexneri CDC
796-83]
Length = 238
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 65 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 124
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 125 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSVSGA 180
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 181 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 209
>gi|320174365|gb|EFW49513.1| Galactitol utilization operon repressor [Shigella dysenteriae CDC
74-1112]
Length = 238
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 65 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 124
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 125 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSVSGA 180
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 181 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 209
>gi|125974926|ref|YP_001038836.1| DeoR family transcriptional regulator [Clostridium thermocellum
ATCC 27405]
gi|256003817|ref|ZP_05428804.1| transcriptional regulator, DeoR family [Clostridium thermocellum
DSM 2360]
gi|281418609|ref|ZP_06249628.1| transcriptional regulator, DeoR family [Clostridium thermocellum
JW20]
gi|125715151|gb|ABN53643.1| transcriptional regulator, DeoR family [Clostridium thermocellum
ATCC 27405]
gi|255992155|gb|EEU02250.1| transcriptional regulator, DeoR family [Clostridium thermocellum
DSM 2360]
gi|281407693|gb|EFB37952.1| transcriptional regulator, DeoR family [Clostridium thermocellum
JW20]
gi|316939136|gb|ADU73170.1| transcriptional regulator, DeoR family [Clostridium thermocellum
DSM 1313]
Length = 267
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 51/150 (34%), Gaps = 21/150 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A A++Y+ T+ + +G+T + + L + I + S +
Sbjct: 75 EEKEAIAIAALKYIRPYQTICIDSGTTTQLLVETLPENI---HLSVITTSLTASMTLSNN 131
Query: 65 HHIP------LHSPEDVSSVDLSIDGFDEIDSRLRLIKGY-----------GGALL-REK 106
+I ++ S + D + + + + +L +K
Sbjct: 132 ENIQVLIPTGFLHHKNRSVILADPDIMKQYQADVAFLSCRAFRVPGGAFEHSQSLTSTKK 191
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+A A + I++ D SK P+E
Sbjct: 192 ALASIAQKRILLLDYSKWGINSLCNSFPLE 221
>gi|56695610|ref|YP_165961.1| DeoR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
gi|56677347|gb|AAV94013.1| transcriptional regulator, DeoR family [Ruegeria pomeroyi DSS-3]
Length = 291
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 42/151 (27%), Gaps = 22/151 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A+ ++ + DGMTL + GST L ++ I + + +
Sbjct: 84 KTRIAKGVLELIRDGMTLFINVGSTTTYVAEQLRERRDLTIVTNSISTVASLADHNGSRV 143
Query: 67 I-------------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ + G D + L ++ +
Sbjct: 144 FLAGGEVSRSERGCFGRATEDFARRFAYDVLVI---GADAMSPELGVLAANPREAELTRA 200
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ A+R IV D K P+E
Sbjct: 201 LLGNATRVIVAADYRKFSAIAPCIAAPLEAI 231
>gi|302336855|ref|YP_003802061.1| DeoR family transcriptional regulator [Spirochaeta smaragdinae DSM
11293]
gi|301634040|gb|ADK79467.1| transcriptional regulator, DeoR family [Spirochaeta smaragdinae DSM
11293]
Length = 259
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+ A++A++ V D + + +GST F+ L
Sbjct: 84 EEKKAIAKKALELVHDNDIIFLNSGSTTLHFLEAL 118
>gi|324112107|gb|EGC06085.1| deoR family protein regulatory protein [Escherichia fergusonii
B253]
Length = 257
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A + +GMT+ + +GST L K +++ + +
Sbjct: 84 KKRIAQAAAAMIEEGMTIILDSGSTTLLIAEALTRKSNITVITNNLPAAYILSDNKDLTL 143
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I +
Sbjct: 144 VVCGGTVRHKTHSMHGTIAERSLHGISADLMFVGADGIDATNG----ITTFNEGYSISSA 199
Query: 108 IAHAASRFIVIGDESKR 124
+A A + I + D +K
Sbjct: 200 MAAVAHKVIAVLDATKF 216
>gi|315299495|gb|EFU58746.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 16-3]
Length = 259
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A + + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAAKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSVSGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|323143817|ref|ZP_08078484.1| transcriptional regulator, DeoR family [Succinatimonas hippei YIT
12066]
gi|322416409|gb|EFY07076.1| transcriptional regulator, DeoR family [Succinatimonas hippei YIT
12066]
Length = 250
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 27/151 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q+KR A+R+A+ Y+ +G + + +G+T LA G + + N +
Sbjct: 77 QLKREASRKALAYIKEGDIVAINSGTTNTVLAQELA-----GLNKRFTVVTNNYAALTIL 131
Query: 65 HHIPLHSP----EDVSSVDLSIDGF------DEIDSRLRLIKGYGGALLRE--------- 105
PL DV ++ S G DE + + L
Sbjct: 132 MQNPLIKLISIGGDVDGLERSSYGAQCVREFDEYIPDIAFLSINAVNALDGFTDFRLNEI 191
Query: 106 ---KIIAHAASRFIVIGDESKRVDFLGRGML 133
K++A + R I + D SK R +L
Sbjct: 192 PIIKLLAKNSKRVIAVMDSSKFNKISKRKVL 222
>gi|82777484|ref|YP_403833.1| galactitol utilization operon repressor [Shigella dysenteriae
Sd197]
gi|81241632|gb|ABB62342.1| Galactitol utilization operon repressor [Shigella dysenteriae
Sd197]
Length = 259
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A+ A++ + +GMT+ + +GST L A ++ + +
Sbjct: 86 KNRIAQAAVKMIHEGMTVILDSGSTTMLIAKGLMTAKNITVITNSLPAAFALSENKDITL 145
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D ++ I +
Sbjct: 146 VVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNG----ITTFNEGYSISGA 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ AA++ I + D SK +LPIE
Sbjct: 202 MVTAANKVIAVLDSSKFNRRGFNQVLPIE 230
>gi|172057093|ref|YP_001813553.1| DeoR family transcriptional regulator [Exiguobacterium sibiricum
255-15]
gi|171989614|gb|ACB60536.1| transcriptional regulator, DeoR family [Exiguobacterium sibiricum
255-15]
Length = 248
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 14/137 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
+ K A+ A + DGM + + G+T + L K +AN IP+
Sbjct: 77 EEKDRIAKAAADLIEDGMYVYLDAGTTTLAIVPYLEQKAITVVTNSLPLANTLLYHRIPT 136
Query: 55 SRNTENFCKIHHIPLHSPEDVSSV----DLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + D++ G + + L +K
Sbjct: 137 FVVGGQLKHSTQALVGYNAREGMLIYHFDVAFLGMNGVHPTQGFTTPDPEEALVKKTAIE 196
Query: 111 AASRFIVIGDESKRVDF 127
A + V+ DE+K D
Sbjct: 197 LAKKSYVLVDETKLDDI 213
>gi|56965335|ref|YP_177067.1| DeoR family transcriptional regulator [Bacillus clausii KSM-K16]
gi|56911579|dbj|BAD66106.1| DeoR family transcriptional regulator [Bacillus clausii KSM-K16]
Length = 262
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 17/147 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK------------IANGFRVQVIPS 54
KR A++A+++V D T+ + G+TA F L K +AN S
Sbjct: 78 KRAIAKKAVEFVFDNDTIYIDYGTTALYFARELIMKKTGLTIVTNSLSLANELVEHSNFS 137
Query: 55 SRNTENFCKIHHIPLHSPEDVSSV-DLSIDGFDEIDSRLRLIKGYGGALLRE----KIIA 109
+ + L+ P ++ +L +D L GY + E +++
Sbjct: 138 IIIIGGNVRKNERSLYGPVANQTIANLYVDTGFFGIGALHPEVGYTNIHMGEAEVSRLMV 197
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
+ R +++ D SK + PIE
Sbjct: 198 QHSKRRVMMADYSKFGSIHMNKVAPIE 224
>gi|291296084|ref|YP_003507482.1| DeoR family transcriptional regulator [Meiothermus ruber DSM 1279]
gi|290471043|gb|ADD28462.1| transcriptional regulator, DeoR family [Meiothermus ruber DSM 1279]
Length = 264
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 18/139 (12%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN----- 57
K+ A+ A++ + +G TL + GST + L+ + + + +
Sbjct: 75 QQAEKQAIAKAALELIEEGDTLILDAGSTTLALVRLMKRAFRSLYIITNSVPIASELSET 134
Query: 58 ------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY------GGALLRE 105
T + H + L P V ++++ + + ++ A ++
Sbjct: 135 RWELLLTGGLVRHHSMALIGPAAVRTLEVYHADKAFMCATGVSLQTGYTTPNPYEAQTKQ 194
Query: 106 KIIAHAASRFIVIGDESKR 124
+ AA + D SK
Sbjct: 195 -AMLRAADTRYALVDSSKL 212
>gi|260596226|ref|YP_003208797.1| Galactitol utilization operon repressor [Cronobacter turicensis
z3032]
gi|260215403|emb|CBA27451.1| Galactitol utilization operon repressor [Cronobacter turicensis
z3032]
Length = 263
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A + +GMTL + +GST LA +AN + +
Sbjct: 90 KKRIAQAAAAMINEGMTLILDSGSTTLLIAHELARMANITVITNSLPAACALANNKDITL 149
Query: 52 I----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + DG D + I +
Sbjct: 150 VVCGGTVRHKTLSMHGTIAEHSLQGISADLMFVGADGIDATNG----ITTFNEGYSVSGA 205
Query: 108 IAHAASRFIVIGDESKR 124
+A AA + I + D +K
Sbjct: 206 MAAAAHKVIAVLDATKF 222
>gi|261420726|ref|YP_003254408.1| DeoR family transcriptional regulator [Geobacillus sp. Y412MC61]
gi|319768396|ref|YP_004133897.1| DeoR family transcriptional regulator [Geobacillus sp. Y412MC52]
gi|261377183|gb|ACX79926.1| transcriptional regulator, DeoR family [Geobacillus sp. Y412MC61]
gi|317113262|gb|ADU95754.1| transcriptional regulator, DeoR family [Geobacillus sp. Y412MC52]
Length = 257
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 50/144 (34%), Gaps = 15/144 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGST---AKEFMI------------LLADKIANGFRVQV 51
K+ AR+A++++ + ++ + +G+T + + +A ++ +
Sbjct: 79 KQAIARKAVEFIPENASIILDSGTTTFEVAKLIKHREDLTVVTNDIKIAAELMESSLKVI 138
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ ++ P DL G +D + L +K++ A
Sbjct: 139 VTGGELQNQIGTLYGWPTQELLKNIRADLFFLGAHAVDIASGVTAPTFEKSLIKKLMMQA 198
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
A ++ D SK + P+
Sbjct: 199 AESTWLLVDSSKFNQKSFSLVCPL 222
>gi|225620006|ref|YP_002721263.1| putative DeoR family transcriptional regulator [Brachyspira
hyodysenteriae WA1]
gi|225214825|gb|ACN83559.1| putative transcriptional regulator, DeoR family [Brachyspira
hyodysenteriae WA1]
Length = 251
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 24/154 (15%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ +K+ A ++ + T+ +G GST+ + + I N + ++ +S F
Sbjct: 73 NQD-LKKQIGEYASSFISNNKTIFIGGGSTSFY----ILENILNYKNITIVTNSVPIITF 127
Query: 62 CKIHHI--------------PLHSPEDVSSV-DLSID----GFDEIDSRLRLIKGYGGAL 102
H D+ + DL D G ID + +
Sbjct: 128 VIQHPEINLIVIGGKWNDRTESFESNDIKQLEDLYPDISFVGAMGIDINRGVTQNTQMQQ 187
Query: 103 LREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
E I+ + ++ D +K + PIE
Sbjct: 188 QTEFIMFEKSKESFILADSTKFNIAYPWTVFPIE 221
>gi|213649226|ref|ZP_03379279.1| ribose-5-phosphate isomerase A [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 34
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 178 NYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFI 211
N I+D I DP + + +PGV+ GLF
Sbjct: 1 NVILDVHGMEILDPIAMENAINAVPGVVTVGLFA 34
>gi|225016082|ref|ZP_03705315.1| hypothetical protein CLOSTMETH_00026 [Clostridium methylpentosum
DSM 5476]
gi|224951079|gb|EEG32288.1| hypothetical protein CLOSTMETH_00026 [Clostridium methylpentosum
DSM 5476]
Length = 247
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K A++A++YV +G T+ + + ST F A + N + ++ +
Sbjct: 77 QQKDIIAQKALKYVKNGQTIFLDSSSTVFRF----AQSLKNFSDITIVTNGIK------- 125
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
+++ D ++ L G + + + G + A +
Sbjct: 126 ---LMNALADCKNLRLYCTGG-LLTPNAKSLIGSSACEFVSRFHADLS 169
>gi|255658949|ref|ZP_05404358.1| transcriptional regulator, DeoR family [Mitsuokella multacida DSM
20544]
gi|260848903|gb|EEX68910.1| transcriptional regulator, DeoR family [Mitsuokella multacida DSM
20544]
Length = 267
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI 52
+ K+ AR A +V DG + + +G+T + L +K +
Sbjct: 76 EAKKQIARMAADFVHDGDVVYIDSGTTTMHMIPYLTEKRRLTIVTASV 123
>gi|169342929|ref|ZP_02863957.1| transcriptional regulator, DeoR family [Clostridium perfringens C
str. JGS1495]
gi|169298838|gb|EDS80912.1| transcriptional regulator, DeoR family [Clostridium perfringens C
str. JGS1495]
Length = 248
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A+ A + DG + + G+T E + L G + V+ + + + +
Sbjct: 79 KRAIAKYAASLIEDGDCIFIDAGTTTYELIDYL-----EGKDILVVSNGLSHIDTLIQKN 133
Query: 67 IPLHSPEDVSSVDL-SIDGFDEIDS------RLRLIKGYGGALLRE-----------KII 108
I + + +I G D + I G K
Sbjct: 134 IKCYVIGGNIKISTKAITGCDALMCLSKFRFDKCFIGANGVHHTYGLTTPDTEEAILKEC 193
Query: 109 A-HAASRFIVIGDESKR 124
A + + + V+ D+SK
Sbjct: 194 AINNSRKSYVLADDSKF 210
>gi|172065237|ref|YP_001815949.1| DeoR family transcriptional regulator [Burkholderia ambifaria
MC40-6]
gi|171997479|gb|ACB68396.1| transcriptional regulator, DeoR family [Burkholderia ambifaria
MC40-6]
Length = 268
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI----------------AN 45
+ + K A A +V DG T+ + G+T LLA + A+
Sbjct: 73 SSQEQKEAIAHTASAFVEDGDTVFLDGGTTTAALARLLAGRTAVHVVTNNLLVVSPLAAS 132
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
G RV VI + + + + + + SVD + G D + + L L + +
Sbjct: 133 GVRVTVIGGDVRSSSMSTLGPLAQIALSRL-SVDKAFLGADGVVAELGLCEASSEQSYLK 191
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + A+ V+ K + P+E
Sbjct: 192 ECVMRQAAEVFVLVTADKLGRASQQHWTPLE 222
>gi|298346093|ref|YP_003718780.1| DeoR family transcriptional regulator [Mobiluncus curtisii ATCC
43063]
gi|298236154|gb|ADI67286.1| DeoR family transcriptional regulator [Mobiluncus curtisii ATCC
43063]
Length = 261
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
+ ++K+ A+ A + V G +G+ G+T E LA ++A
Sbjct: 74 NQGRIKQRLAKAAAKMVKPGDVIGLNGGTTTTEVSRELALRVAK 117
>gi|167772742|ref|ZP_02444795.1| hypothetical protein ANACOL_04124 [Anaerotruncus colihominis DSM
17241]
gi|167665220|gb|EDS09350.1| hypothetical protein ANACOL_04124 [Anaerotruncus colihominis DSM
17241]
Length = 272
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 3 ALQM---KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
QM K AR A+ V DG + +G+G+T EF L K
Sbjct: 90 QTQMLRQKEAIARAAVDLVDDGDIIAIGSGTTTLEFARKLIHKEK 134
>gi|315657407|ref|ZP_07910289.1| DeoR family transcriptional regulator [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315491879|gb|EFU81488.1| DeoR family transcriptional regulator [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 261
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
+ ++K+ A+ A + V G +G+ G+T E LA ++A
Sbjct: 74 NQGRIKQRLAKAAAKMVKPGDVIGLNGGTTTTEVSRELALRVAK 117
>gi|315654675|ref|ZP_07907581.1| DeoR family transcriptional regulator [Mobiluncus curtisii ATCC
51333]
gi|315491139|gb|EFU80758.1| DeoR family transcriptional regulator [Mobiluncus curtisii ATCC
51333]
Length = 261
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
+ ++K+ A+ A + V G +G+ G+T E LA ++A
Sbjct: 74 NQGRIKQRLAKAAAKMVKPGDVIGLNGGTTTTEVSRELALRVAK 117
>gi|270284065|ref|ZP_05965491.2| putative DeoR-type transcriptional regulator [Bifidobacterium
gallicum DSM 20093]
gi|270278030|gb|EFA23884.1| putative DeoR-type transcriptional regulator [Bifidobacterium
gallicum DSM 20093]
Length = 248
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ A+ YV G + +G G+TA F L +
Sbjct: 59 LKDAIAQEAVNYVQPGDVIAIGGGTTAYVFAQHLLE 94
>gi|206575842|ref|YP_002236953.1| glucitol operon repressor [Klebsiella pneumoniae 342]
gi|206564900|gb|ACI06676.1| glucitol operon repressor [Klebsiella pneumoniae 342]
Length = 257
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------ 54
K A A++Y+ DG ++ + GST + + LL+ + N + S
Sbjct: 77 KKAQIAEAAVRYIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSEFDNEQ 136
Query: 55 ---------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + +F + + DG D + + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDLVAG----VTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKR 124
K + +AA I++ D SK
Sbjct: 193 KAMCNAAREVILMADSSKF 211
>gi|241701776|ref|XP_002402879.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504902|gb|EEC14396.1| conserved hypothetical protein [Ixodes scapularis]
Length = 33
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 200 NIPGVIEHGLFINMVDCAIIGTSDGECL 227
IPGV+E GLF+ M G +DG
Sbjct: 1 MIPGVVETGLFVGMAQKVYYGLNDGSVT 28
>gi|288933909|ref|YP_003437968.1| DeoR family transcriptional regulator [Klebsiella variicola At-22]
gi|290511010|ref|ZP_06550379.1| DeoR family transcriptional regulator, glucitol operon repressor
[Klebsiella sp. 1_1_55]
gi|288888638|gb|ADC56956.1| transcriptional regulator, DeoR family [Klebsiella variicola At-22]
gi|289776003|gb|EFD84002.1| DeoR family transcriptional regulator, glucitol operon repressor
[Klebsiella sp. 1_1_55]
Length = 257
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------ 54
K A A++Y+ DG ++ + GST + + LL+ + N + S
Sbjct: 77 KKAQIAEAAVRYIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSEFDNEQ 136
Query: 55 ---------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + +F + + DG D + + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDLVAG----VTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKR 124
K + +AA I++ D SK
Sbjct: 193 KAMCNAAREVILMADSSKF 211
>gi|168210321|ref|ZP_02635946.1| transcriptional regulator, DeoR family [Clostridium perfringens B
str. ATCC 3626]
gi|170711595|gb|EDT23777.1| transcriptional regulator, DeoR family [Clostridium perfringens B
str. ATCC 3626]
Length = 248
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 24/138 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
KR A+ A + DG + + G+T E + L G + V+ + + +
Sbjct: 78 KKRAIAKYAASLIEDGDCIFVDAGTTTYELIDYL-----EGKDILVVSNGLSHIDTLIQK 132
Query: 66 HIPLHSPEDVSSVDL-SIDGFDEIDS------RLRLIKGYGGALLRE-----------KI 107
+I + + +I G D + I G K
Sbjct: 133 NIKCYVIGGNIKISTKAITGCDALMCLSKFRFDKCFIGANGVHHTYGLTTPDTEEAILKE 192
Query: 108 IA-HAASRFIVIGDESKR 124
A + + + V+ D+SK
Sbjct: 193 CAINNSRKAYVLADDSKF 210
>gi|293393089|ref|ZP_06637404.1| DeoR family transcriptional regulator [Serratia odorifera DSM 4582]
gi|291424235|gb|EFE97449.1| DeoR family transcriptional regulator [Serratia odorifera DSM 4582]
Length = 255
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 24/150 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR + A V DG + + G+T +A +A F + V+ + +
Sbjct: 79 KRAIGKYAATLVEDGQVVYLDAGTTTY----EIARNLAERFNLTVVTNDFSIIQHLMNRP 134
Query: 67 I----------PLHSPEDVS----------SVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ V ++D++ D L + +L ++
Sbjct: 135 QLSLFHTGGLVDQRNYSCVGNSAAMLLRTLNIDVAFISTSSWDLEHGLSTPHEEKVLVKQ 194
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ A R +++ D SK + + P+E
Sbjct: 195 ALLEVARRRVLVSDSSKYGKYGMFRVCPLE 224
>gi|284033366|ref|YP_003383297.1| DeoR family transcriptional regulator [Kribbella flavida DSM 17836]
gi|283812659|gb|ADB34498.1| transcriptional regulator, DeoR family [Kribbella flavida DSM
17836]
Length = 260
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 52/143 (36%), Gaps = 26/143 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK--------------------IANG 46
K+ A+ A V GM +GM G+T E LA + IAN
Sbjct: 78 KQRIAQAAATLVRRGMVIGMNGGTTISEVARTLATRPELSAEHGEPAFTLVTNALNIANE 137
Query: 47 F----RVQVIPSSRNTENFCKIHHIPLHSPEDVS-SVDLSIDGFDEIDSRLRLIKGYGGA 101
V+++ + PL S+D++ G D ID G A
Sbjct: 138 LIVRPHVKMVLTGGVARPQSYEMIGPLSHRILADLSLDIAFIGVDGIDETGATAHHEGEA 197
Query: 102 LLREKIIAHAASRFIVIGDESKR 124
+ + +I AS+ +V+ D SK
Sbjct: 198 NINQ-LIVSRASKVVVVADSSKL 219
>gi|18309568|ref|NP_561502.1| transcriptional regulator [Clostridium perfringens str. 13]
gi|110799175|ref|YP_695020.1| DeoR family transcriptional regulator [Clostridium perfringens ATCC
13124]
gi|168207398|ref|ZP_02633403.1| transcriptional regulator, DeoR family [Clostridium perfringens E
str. JGS1987]
gi|168214516|ref|ZP_02640141.1| transcriptional regulator, DeoR family [Clostridium perfringens CPE
str. F4969]
gi|168216349|ref|ZP_02641974.1| transcriptional regulator, DeoR family [Clostridium perfringens
NCTC 8239]
gi|182626559|ref|ZP_02954307.1| transcriptional regulator, DeoR family [Clostridium perfringens D
str. JGS1721]
gi|18144245|dbj|BAB80292.1| probable transcriptional regulator [Clostridium perfringens str.
13]
gi|110673822|gb|ABG82809.1| transcriptional regulator, DeoR family [Clostridium perfringens
ATCC 13124]
gi|170661238|gb|EDT13921.1| transcriptional regulator, DeoR family [Clostridium perfringens E
str. JGS1987]
gi|170714012|gb|EDT26194.1| transcriptional regulator, DeoR family [Clostridium perfringens CPE
str. F4969]
gi|177908147|gb|EDT70713.1| transcriptional regulator, DeoR family [Clostridium perfringens D
str. JGS1721]
gi|182381360|gb|EDT78839.1| transcriptional regulator, DeoR family [Clostridium perfringens
NCTC 8239]
Length = 248
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A+ A + DG + + G+T E + L G + V+ + + + +
Sbjct: 79 KRAIAKYAASLIEDGDCIFVDAGTTTYELIDYL-----EGKDILVVSNGLSHIDTLIQKN 133
Query: 67 IPLHSPEDVSSVDL-SIDGFDEIDS------RLRLIKGYGGALLRE-----------KII 108
I + + +I G D + I G K
Sbjct: 134 IKCYVIGGNIKISTKAITGCDALMCLSKFRFDKCFIGANGVHHTYGLTTPDTEEAILKEC 193
Query: 109 A-HAASRFIVIGDESKR 124
A + + + V+ D+SK
Sbjct: 194 AINNSRKAYVLADDSKF 210
>gi|28210247|ref|NP_781191.1| DNA-binding protein iolR [Clostridium tetani E88]
gi|28202683|gb|AAO35128.1| DNA-binding protein iolR [Clostridium tetani E88]
Length = 259
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 47/136 (34%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG---------------FRV 49
+ K+ A+ A V +G + + +G+T + L+DK +
Sbjct: 80 ETKKTIAKAASNLVENGDIIYIDSGTTTMHMIPFLSDKKNVNIITNNVNVIVNSFPYKNL 139
Query: 50 QVIPSSRN-TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
++ + + + N + I + ++ + + + +K +
Sbjct: 140 NILSTGGSLSRNTNSLIGIESINFLKNYNISKCFMASTGVSIKKGVTNSSSFEYEIKKTV 199
Query: 109 AHAASRFIVIGDESKR 124
+S+ I++ D SK
Sbjct: 200 VKQSSKIILLADSSKL 215
>gi|157364406|ref|YP_001471173.1| DeoR family transcriptional regulator [Thermotoga lettingae TMO]
gi|157315010|gb|ABV34109.1| transcriptional regulator, DeoR family [Thermotoga lettingae TMO]
Length = 255
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 19/149 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ--------VIPSSRNT 58
K+ A++ +++ +G T+ +G G+T + L + + + + T
Sbjct: 78 KQCIAKKVVEFFKNGQTIAVGGGTTVYYVIKALESSSIHSLNIATNSITTAWAVINLSKT 137
Query: 59 ENFCKIHHIPLHSPEDV-----SSV--DLSIDGFDEIDSRLRLIKGYGGALLREKIIA-- 109
N + H + S + +L D + S + L G A E+ +A
Sbjct: 138 FNLIHSGGVVRHGSFECVGGYASKLFENLYFDCYVLGASGVGLGSGVTVADFEERNLAEL 197
Query: 110 --HAASRFIVIGDESKRVDFLGRGMLPIE 136
+ I+ D +K + IE
Sbjct: 198 IIQKSKTVILTVDSTKINQVAPYKICNIE 226
>gi|154488243|ref|ZP_02029360.1| hypothetical protein BIFADO_01817 [Bifidobacterium adolescentis
L2-32]
gi|154083394|gb|EDN82439.1| hypothetical protein BIFADO_01817 [Bifidobacterium adolescentis
L2-32]
Length = 267
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 22/141 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA--------------------N 45
+K A+ A++YV G + +G G+TA F L +
Sbjct: 78 LKDAIAQEAVKYVAPGDVIAIGGGTTAYVFAQHLLESQQSSGITILTNSIPVAELVQALE 137
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLR 104
V+VI + T + V+ G + R L+ A
Sbjct: 138 SKDVEVIVTGGVTTRSNSLVGPIADKVVASLRVNTVFLGTHSVSIPRGFLMPNSLEAATD 197
Query: 105 EKIIAHAASRFIVIGDESKRV 125
+ A R I++ D +K
Sbjct: 198 M-AMMDIADRTIILTDHTKWS 217
>gi|119026351|ref|YP_910196.1| DeoR-type transcriptional regulator [Bifidobacterium adolescentis
ATCC 15703]
gi|118765935|dbj|BAF40114.1| probable DeoR-type transcriptional regulator [Bifidobacterium
adolescentis ATCC 15703]
Length = 273
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 22/141 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA--------------------N 45
+K A+ A++YV G + +G G+TA F L +
Sbjct: 84 LKDAIAQEAVKYVAPGDVIAIGGGTTAYVFAQHLLESQQSSGITILTNSIPVAELVQALE 143
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLR 104
V+VI + T + V+ G + R L+ A
Sbjct: 144 SKDVEVIVTGGVTTRSNSLVGPIADKVVASLRVNTVFLGTHSVSIPRGFLMPNSLEAATD 203
Query: 105 EKIIAHAASRFIVIGDESKRV 125
+ A R I++ D +K
Sbjct: 204 M-AMMDIADRTIILTDHTKWS 223
>gi|293401438|ref|ZP_06645581.1| transcriptional regulator, DeoR family [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291305076|gb|EFE46322.1| transcriptional regulator, DeoR family [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 260
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 49/143 (34%), Gaps = 26/143 (18%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
K A+ AI YV DG TL + TG+TA F L ++ +S
Sbjct: 81 DDKKMKIAQSAIAYVHDGDTLALDTGTTALAFANALIQSSKKNLKII---TSDLMLLHTF 137
Query: 64 IHHIPLHSPEDVSSVD-----------------LSIDGFDEIDSRLRLIKG-----YGGA 101
+ +D F S + L++G G A
Sbjct: 138 EKRQDFEIISIGGEIRHGFHFACGDIAIRMLSAFHVDKFFLTTSAIDLVQGLTTPNAGTA 197
Query: 102 LLREKIIAHAASRFIVIGDESKR 124
L+ K++A A+ I++ D +K
Sbjct: 198 HLKAKMMA-IANETILLVDSTKF 219
>gi|300924245|ref|ZP_07140231.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300419544|gb|EFK02855.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
Length = 257
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFSFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|289825779|ref|ZP_06544947.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 108
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A V +GMT+ + +GST LA K
Sbjct: 66 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARK 101
>gi|171742247|ref|ZP_02918054.1| hypothetical protein BIFDEN_01353 [Bifidobacterium dentium ATCC
27678]
gi|283456643|ref|YP_003361207.1| DeoR family transcriptional regulator [Bifidobacterium dentium Bd1]
gi|306822189|ref|ZP_07455571.1| DeoR family transcriptional regulator [Bifidobacterium dentium ATCC
27679]
gi|309802177|ref|ZP_07696285.1| transcriptional regulator, DeoR family [Bifidobacterium dentium
JCVIHMP022]
gi|171277861|gb|EDT45522.1| hypothetical protein BIFDEN_01353 [Bifidobacterium dentium ATCC
27678]
gi|283103277|gb|ADB10383.1| Transcriptional regulator, DeoR family [Bifidobacterium dentium
Bd1]
gi|304554571|gb|EFM42476.1| DeoR family transcriptional regulator [Bifidobacterium dentium ATCC
27679]
gi|308221060|gb|EFO77364.1| transcriptional regulator, DeoR family [Bifidobacterium dentium
JCVIHMP022]
Length = 267
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ A++YV G + +G G+TA F L +
Sbjct: 78 LKDAIAQEAVKYVAPGDVIAIGGGTTAYVFAQHLLE 113
>gi|329851371|ref|ZP_08266128.1| glycerol-3-phosphate regulon repressor [Asticcacaulis biprosthecum
C19]
gi|328840217|gb|EGF89789.1| glycerol-3-phosphate regulon repressor [Asticcacaulis biprosthecum
C19]
Length = 305
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 2 DAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ + K+ A +A Q V DGMT+ + +GST+ L+ +
Sbjct: 127 NQNAEKKQAIALKAAQLVEDGMTILIDSGSTSYWLSRALSKQ 168
>gi|74313271|ref|YP_311690.1| DNA-binding transcriptional repressor SrlR [Shigella sonnei Ss046]
gi|82545218|ref|YP_409165.1| DNA-bindng transcriptional repressor SrlR [Shigella boydii Sb227]
gi|157159440|ref|YP_001464015.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli
E24377A]
gi|187731179|ref|YP_001881544.1| DNA-binding transcriptional repressor SrlR [Shigella boydii CDC
3083-94]
gi|193069641|ref|ZP_03050593.1| glucitol operon repressor [Escherichia coli E110019]
gi|218555249|ref|YP_002388162.1| DNA-binding transcriptional repressor SrlR [Escherichia coli IAI1]
gi|218696298|ref|YP_002403965.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli 55989]
gi|256019516|ref|ZP_05433381.1| DNA-bindng transcriptional repressor SrlR [Shigella sp. D9]
gi|260856812|ref|YP_003230703.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
O26:H11 str. 11368]
gi|260869380|ref|YP_003235782.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
O111:H- str. 11128]
gi|293449020|ref|ZP_06663441.1| srlR [Escherichia coli B088]
gi|300820481|ref|ZP_07100632.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|301326268|ref|ZP_07219644.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|331669439|ref|ZP_08370285.1| glucitol operon repressor [Escherichia coli TA271]
gi|331678679|ref|ZP_08379353.1| glucitol operon repressor [Escherichia coli H591]
gi|332280639|ref|ZP_08393052.1| regulator for gut [Shigella sp. D9]
gi|73856748|gb|AAZ89455.1| regulator for gut (srl), glucitol operon [Shigella sonnei Ss046]
gi|81246629|gb|ABB67337.1| regulator for glucitol operon [Shigella boydii Sb227]
gi|157081470|gb|ABV21178.1| glucitol operon repressor [Escherichia coli E24377A]
gi|187428171|gb|ACD07445.1| glucitol operon repressor [Shigella boydii CDC 3083-94]
gi|192957004|gb|EDV87455.1| glucitol operon repressor [Escherichia coli E110019]
gi|218353030|emb|CAU98855.1| DNA-bindng transcriptional repressor [Escherichia coli 55989]
gi|218362017|emb|CAQ99624.1| DNA-bindng transcriptional repressor [Escherichia coli IAI1]
gi|257755461|dbj|BAI26963.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
O26:H11 str. 11368]
gi|257765736|dbj|BAI37231.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
O111:H- str. 11128]
gi|291322110|gb|EFE61539.1| srlR [Escherichia coli B088]
gi|300526745|gb|EFK47814.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300847008|gb|EFK74768.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|320173441|gb|EFW48640.1| Glucitol operon repressor [Shigella dysenteriae CDC 74-1112]
gi|320186493|gb|EFW61221.1| Glucitol operon repressor [Shigella flexneri CDC 796-83]
gi|320197710|gb|EFW72319.1| Glucitol operon repressor [Escherichia coli EC4100B]
gi|323154918|gb|EFZ41110.1| glucitol operon repressor [Escherichia coli EPECa14]
gi|323167121|gb|EFZ52839.1| glucitol operon repressor [Shigella sonnei 53G]
gi|323173011|gb|EFZ58642.1| glucitol operon repressor [Escherichia coli LT-68]
gi|323180125|gb|EFZ65677.1| glucitol operon repressor [Escherichia coli 1180]
gi|323183230|gb|EFZ68627.1| glucitol operon repressor [Escherichia coli 1357]
gi|323966852|gb|EGB62281.1| deoR family protein regulatory protein [Escherichia coli M863]
gi|323978685|gb|EGB73767.1| deoR family protein regulatory protein [Escherichia coli TW10509]
gi|324119956|gb|EGC13834.1| deoR family protein regulatory protein [Escherichia coli E1167]
gi|327251426|gb|EGE63112.1| glucitol operon repressor [Escherichia coli STEC_7v]
gi|331063107|gb|EGI35020.1| glucitol operon repressor [Escherichia coli TA271]
gi|331073509|gb|EGI44830.1| glucitol operon repressor [Escherichia coli H591]
gi|332091894|gb|EGI96972.1| glucitol operon repressor [Shigella boydii 3594-74]
gi|332102991|gb|EGJ06337.1| regulator for gut [Shigella sp. D9]
Length = 257
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFSFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|168054161|ref|XP_001779501.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669083|gb|EDQ55677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 77
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 166 RNGSGLFVSDGGNYIVDAFF------GFIPDPQIISGELCNIPGVIEHGLFINMV 214
G ++ G++++D F G +P ++ L IPGV+ HGL I++
Sbjct: 23 SGGDNPLITPEGHFVLDVVFTTPITAGNLPMSSEVAENLETIPGVMGHGLVIDVA 77
>gi|323946415|gb|EGB42443.1| deoR family protein Bacterial regulatory protein [Escherichia coli
H120]
Length = 257
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFSFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|213609375|ref|ZP_03369201.1| galactitol utilization operon repressor [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 144
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A V +GMT+ + +GST LA K
Sbjct: 84 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARK 119
>gi|333023164|ref|ZP_08451228.1| putative DeoR family transcriptional regulator [Streptomyces sp.
Tu6071]
gi|332743016|gb|EGJ73457.1| putative DeoR family transcriptional regulator [Streptomyces sp.
Tu6071]
Length = 282
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 23/174 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A RA + V DGMT+ + G+T + LLA + + V+ + T +
Sbjct: 87 KQAMAARAAELVQDGMTVYLDAGTTLSAMVPLLARR----ESLTVVTNDFTTADL----- 137
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+D+ I ++ R G A ++ A F+ +
Sbjct: 138 -----LMASPHIDV-IHVGGRVEPANRSSVGRLAARTLRQLALDLA--FVSTSSWDRLRG 189
Query: 127 FLGRGMLPIEIDQFGVN----KTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
L +E+ + + L A FG L + ++D
Sbjct: 190 VTTPSELKVEVKKAAMECAGSSVLVAGSSKYGTFGKYRVAPL--TSFDVVITDE 241
>gi|310827181|ref|YP_003959538.1| DeoR-family transcriptional regulator [Eubacterium limosum KIST612]
gi|308738915|gb|ADO36575.1| DeoR-family transcriptional regulator [Eubacterium limosum KIST612]
Length = 255
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 18/144 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIPSSRNTENFCKIH 65
KR A++A + + DG T+ + +GST + + L D + N + + + + +
Sbjct: 83 KRIIAQKAARLIKDGDTIALNSGSTVELVLDYLEDMKSLNVITLSLNVALKASTVKGVNV 142
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE----------------KIIA 109
+P +S D+ + + K + G L + +A
Sbjct: 143 FMPGGRLRSISG-AFYGKDADDFLRKFNIDKAFMGVLAVSIPKGVTHSSLEEIEVNQTLA 201
Query: 110 HAASRFIVIGDESKRVDFLGRGML 133
+ + ++ D +K M
Sbjct: 202 EISQKCYLMADYTKFDKISLAKMF 225
>gi|239622398|ref|ZP_04665429.1| DeoR-family transcriptional regulator [Bifidobacterium longum
subsp. infantis CCUG 52486]
gi|239514395|gb|EEQ54262.1| DeoR-family transcriptional regulator [Bifidobacterium longum
subsp. infantis CCUG 52486]
Length = 273
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ A++YV G + +G G+TA F L +
Sbjct: 84 LKDAIAQEAVKYVAPGDVIAIGGGTTAYVFAQHLLE 119
>gi|77461944|ref|YP_351451.1| DeoR family transcriptional regulator [Pseudomonas fluorescens
Pf0-1]
gi|77385947|gb|ABA77460.1| DeoR family transcriptional regulator [Pseudomonas fluorescens
Pf0-1]
Length = 258
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIANGFR------- 48
K+ AR A++ + + + + +GST + L +AN
Sbjct: 78 KQAIARAAVKRIREHARIIIDSGSTTAAMIPELGQQPGLVVMTNSLHVANALSELEHEPV 137
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A IV+ + K + LP
Sbjct: 194 VMAEVAREVIVMVEADKIGRKIPNLELP 221
>gi|196250434|ref|ZP_03149126.1| transcriptional regulator, DeoR family [Geobacillus sp. G11MC16]
gi|196210093|gb|EDY04860.1| transcriptional regulator, DeoR family [Geobacillus sp. G11MC16]
Length = 253
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ AR+A++++ + + + +G+T E L+ D+ + +
Sbjct: 79 KQAIARKAVEFIPENANIILDSGTTTFEVAKLIKDREDLTVVTNDIKIAAELMESQLKVI 138
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ ++ P DL G +D + L +K++ A
Sbjct: 139 VTGGELQNQVGTLYGWPTQELLKNIRADLFFLGAHAVDVISGVTAPTFEKSLIKKMMIQA 198
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
A ++ D SK + P+
Sbjct: 199 AEVTWLLADSSKFNQKAFSLVCPL 222
>gi|318059613|ref|ZP_07978336.1| DeoR family transcriptional regulator [Streptomyces sp. SA3_actG]
gi|318077596|ref|ZP_07984928.1| DeoR family transcriptional regulator [Streptomyces sp. SA3_actF]
Length = 282
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 23/174 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A RA + V DGMT+ + G+T + LLA + + V+ + T +
Sbjct: 87 KQAMAARAAELVQDGMTVYLDAGTTLSAMVPLLARR----ESLTVVTNDFTTADL----- 137
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+D+ I ++ R G A ++ A F+ +
Sbjct: 138 -----LMASPHIDV-IHVGGRVEPANRSSVGRLAARTLRQLALDLA--FVSTSSWDRLRG 189
Query: 127 FLGRGMLPIEIDQFGVN----KTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
L +E+ + + L A FG L + ++D
Sbjct: 190 VTTPSELKVEVKKAAMECAGSSVLVAGSSKYGTFGKYRVAPL--TSFDVVITDE 241
>gi|116671924|ref|YP_832857.1| DeoR family transcriptional regulator [Arthrobacter sp. FB24]
gi|116612033|gb|ABK04757.1| transcriptional regulator, DeoR family [Arthrobacter sp. FB24]
Length = 263
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR A A V +GM +G+G G+T LA ++ NG R+ V+ +S +
Sbjct: 80 KRAIALEAASLVHEGMAVGLGAGTTTW----ALAKELVNGPRITVVTNSIRIADLFH 132
>gi|317496330|ref|ZP_07954685.1| deoR family bacterial regulatory protein [Gemella moribillum M424]
gi|316913553|gb|EFV35044.1| deoR family bacterial regulatory protein [Gemella moribillum M424]
Length = 249
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ AR+ V D T+ +G GST L D+ + ++ +S K
Sbjct: 78 EEKKQIARKVADLVKDNETIFIGAGSTTSYLAEYLQDR-----NINIVTNSMIVFEQFKD 132
Query: 65 HH 66
+
Sbjct: 133 NP 134
>gi|256383690|gb|ACU78260.1| transcriptional regulator of the fructose operon, DeoR family
[Mycoplasma mycoides subsp. capri str. GM12]
gi|256384521|gb|ACU79090.1| transcriptional regulator of the fructose operon, DeoR family
[Mycoplasma mycoides subsp. capri str. GM12]
gi|296455404|gb|ADH21639.1| transcriptional regulator of the fructose operon, DeoR family
[synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 232
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 48/142 (33%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCK 63
Q K+ A +A++ + + + +GST LA + ++++ S N + K
Sbjct: 78 QAKQQIAIKALKKIKPKTCIFLDSGSTTYY----LAKILDPNLDLKIVTNSILNVQELSK 133
Query: 64 IHHIPLHSP--------------EDVSSVDLSIDGFDEID----SRLRLIKGYGGALLRE 105
+H ++ + V+ + I I +
Sbjct: 134 NNHQNIYLLGGKYQVVTSSILGYQAVNDLKNYFFDLSFIGINAVDDQNNIYTTSDDHAQL 193
Query: 106 K-IIAHAASRFIVIGDESKRVD 126
K + +++ + D+SK+
Sbjct: 194 KIQVIKNSNKSYGLVDQSKKHS 215
>gi|322834153|ref|YP_004214180.1| DeoR family transcriptional regulator [Rahnella sp. Y9602]
gi|321169354|gb|ADW75053.1| transcriptional regulator, DeoR family [Rahnella sp. Y9602]
Length = 260
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ A+ A V G T+ + +GST L ++ + +
Sbjct: 87 KKRIAQTAAGLVKPGDTVILDSGSTTMLLAEELVKAGDITVITNNLPAAFVLSENPDITL 146
Query: 52 IPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ T + + + + DG D I + I
Sbjct: 147 VVCGGTLRHKTRSLHGNITEYALQGIVANLMFVGADGLDAATG----ITTFNEGYSISGI 202
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+A AA R +V+ D +K +LP+E
Sbjct: 203 MADAAQRVVVVTDSTKFGRRGYNLVLPME 231
>gi|297242920|ref|ZP_06926858.1| DeoR-type transcriptional regulator [Gardnerella vaginalis AMD]
gi|296889131|gb|EFH27865.1| DeoR-type transcriptional regulator [Gardnerella vaginalis AMD]
Length = 285
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-KIANGFRV 49
+K AR A+ YV G + +G G+TA F L + + A+G +
Sbjct: 78 LKDAIARLAVDYVSPGDVIAIGGGTTAYVFAQHLLESRRASGITI 122
>gi|298253286|ref|ZP_06977078.1| DeoR-type transcriptional regulator [Gardnerella vaginalis 5-1]
gi|297532681|gb|EFH71567.1| DeoR-type transcriptional regulator [Gardnerella vaginalis 5-1]
Length = 291
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-KIANGFRV 49
+K AR A+ YV G + +G G+TA F L + + A+G +
Sbjct: 84 LKDAIARLAVDYVSPGDVIAIGGGTTAYVFAQHLLESRRASGITI 128
>gi|295099356|emb|CBK88445.1| Transcriptional regulators of sugar metabolism [Eubacterium
cylindroides T2-87]
Length = 251
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 19/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR RA Q + DG + + +GST L ++ V T
Sbjct: 78 EDKRRITFRAFQEIKDGQIVYLDSGSTVLLGANAL--QMKKDITVVTNSIPLLTHCIAMN 135
Query: 65 HHI-----------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ + D +D++I G D I L ++
Sbjct: 136 INTIVCGGFLFNTGARTYGHFAANIIDHLHIDVAIMGTDGILDSNGFTTMNSNELSLKRH 195
Query: 108 IAHAASRFIVIGDESKR 124
+ + + I + D SK
Sbjct: 196 VMNQTKKLIAVCDGSKF 212
>gi|229818145|ref|ZP_04448427.1| hypothetical protein BIFANG_03437 [Bifidobacterium angulatum DSM
20098]
gi|229784396|gb|EEP20510.1| hypothetical protein BIFANG_03437 [Bifidobacterium angulatum DSM
20098]
Length = 269
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A++A+ YV G + +G G+TA F L +
Sbjct: 78 LKDAIAQKAVSYVSPGDVIAIGGGTTAYVFAQHLLE 113
>gi|237737448|ref|ZP_04567929.1| transcriptional regulator [Fusobacterium mortiferum ATCC 9817]
gi|229421310|gb|EEO36357.1| transcriptional regulator [Fusobacterium mortiferum ATCC 9817]
Length = 236
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A +Y+ DG + + GST + + L + ++V+ + +
Sbjct: 74 KAKEKIAKIASEYIKDGDIIYLDAGSTTEILIKYL----EDKENIKVVTNGISHLEELNR 129
Query: 65 HHIPLHSPE-------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ I + ++D++ G + + S A + +
Sbjct: 130 YGIETYLLGGEAKFTTGATVGIGAVTSLRGYNIDIAFIGANGVTSEGYSTPDTKEA-MIK 188
Query: 106 KIIAHAASRFIVIGDESKR 124
A+ + D SK
Sbjct: 189 SEAISRANEVYFLCDSSKF 207
>gi|296453616|ref|YP_003660759.1| DeoR family transcriptional regulator [Bifidobacterium longum
subsp. longum JDM301]
gi|296183047|gb|ADG99928.1| transcriptional regulator, DeoR family [Bifidobacterium longum
subsp. longum JDM301]
Length = 267
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
MD L +K A+ AI+YV G + +G G+TA F L +
Sbjct: 74 MD-LGLKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 113
>gi|295097288|emb|CBK86378.1| Transcriptional regulators of sugar metabolism [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 257
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 24/150 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTEN- 60
K A A++++ DG ++ + GST + + LL+ + N + S ++E
Sbjct: 78 KALIAEAAVKFIQDGDSIILDAGSTVLQMIPLLSRFNNITVMTNSLHIVNALSEFDSEQT 137
Query: 61 --------------FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
F + + DG D + + K
Sbjct: 138 ILMPGGTFRKKSASFHGQLAENAFDHFSFDKLFMGTDGIDL----NAGVTTFNEVFSVSK 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ +AA I++ D SK + +E
Sbjct: 194 AMCNAAREVILMADSSKFGRKSPNIVCSLE 223
>gi|23465780|ref|NP_696383.1| DeoR-type transcriptional regulator [Bifidobacterium longum
NCC2705]
gi|23326470|gb|AAN25019.1| probable DeoR-type transcriptional regulator [Bifidobacterium
longum NCC2705]
Length = 298
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 105 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 140
>gi|288906169|ref|YP_003431391.1| transcriptional regulator, DeoR family [Streptococcus gallolyticus
UCN34]
gi|288732895|emb|CBI14474.1| putative transcriptional regulator, DeoR family [Streptococcus
gallolyticus UCN34]
Length = 250
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K+ A++A++ + D ++ +GTGST E LLA K +P
Sbjct: 78 KKRIAQKALELIPDNASIIIGTGSTTVELAYLLAQKSGYKIFTDSLP 124
>gi|302523013|ref|ZP_07275355.1| transcriptional regulator [Streptomyces sp. SPB78]
gi|302431908|gb|EFL03724.1| transcriptional regulator [Streptomyces sp. SPB78]
Length = 274
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 23/174 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A RA + V DGMT+ + G+T + LLA + + V+ + T +
Sbjct: 79 KQAMAARAAELVQDGMTVYLDAGTTLSAMVPLLARR----ESLTVVTNDFTTADL----- 129
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+D+ I ++ R G A ++ A F+ +
Sbjct: 130 -----LMASPHIDV-IHVGGRVEPANRSSVGRLAARTLRQLALDLA--FVSTSSWDRLRG 181
Query: 127 FLGRGMLPIEIDQFGVN----KTLSALKEVASCFGLNEELRLRRNGSGLFVSDG 176
L +E+ + + L A FG L + ++D
Sbjct: 182 VTTPSELKVEVKKAAMECAGSSVLVAGSSKYGTFGKYRVAPL--TSFDVVITDE 233
>gi|213857483|ref|ZP_03384454.1| hypothetical protein SentesT_20214 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 177
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A V +GMT+ + +GST LA K
Sbjct: 84 KKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARK 119
>gi|229544974|ref|ZP_04433699.1| DeoR family transcriptional regulator [Enterococcus faecalis
TX1322]
gi|256961105|ref|ZP_05565276.1| transcriptional regulator [Enterococcus faecalis Merz96]
gi|293384051|ref|ZP_06629945.1| transcriptional regulator, DeoR family [Enterococcus faecalis R712]
gi|293386865|ref|ZP_06631435.1| transcriptional regulator, DeoR family [Enterococcus faecalis S613]
gi|312907998|ref|ZP_07766981.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis DAPTO
512]
gi|312978474|ref|ZP_07790212.1| DeoR-like helix-turn-helix domain protein [Enterococcus faecalis
DAPTO 516]
gi|229309866|gb|EEN75853.1| DeoR family transcriptional regulator [Enterococcus faecalis
TX1322]
gi|256951601|gb|EEU68233.1| transcriptional regulator [Enterococcus faecalis Merz96]
gi|291078531|gb|EFE15895.1| transcriptional regulator, DeoR family [Enterococcus faecalis R712]
gi|291083699|gb|EFE20662.1| transcriptional regulator, DeoR family [Enterococcus faecalis S613]
gi|310626089|gb|EFQ09372.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis DAPTO
512]
gi|311288623|gb|EFQ67179.1| DeoR-like helix-turn-helix domain protein [Enterococcus faecalis
DAPTO 516]
Length = 251
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS---RNTENFCK 63
K+ A++A++ + D ++ +GTGST E ILL+ K +P + +++N
Sbjct: 79 KKLVAQKALELIPDNSSIVIGTGSTTLELAILLSMKSGYKIFTDSLPVASLLISSKNQVF 138
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFI 116
+ L P +I ++I L + G + + ++ F+
Sbjct: 139 LFGGELREPSSSVFGGWTISQINQIQVDLCFLGTDGFSNVDGPTSPSSSDVFV 191
>gi|325979135|ref|YP_004288851.1| DeoR family transcriptional regulator [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325179063|emb|CBZ49107.1| transcriptional regulator, DeoR family [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 250
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A++A++ + D ++ +GTGST E LLA K +P + N
Sbjct: 78 KKRIAQKALELIPDNASIIIGTGSTTVELAYLLAQKSGYKIFTDSLPVTNALVNSDNQLF 137
Query: 67 IPLHSPEDVSS---------------VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
SS VD+ G D + + ++ I
Sbjct: 138 FFGGEFRPKSSSVFGGWTISQIKQVFVDICFLGSDGFSNIDGPSSPSSSDVSIDQEIIKQ 197
Query: 112 ASRFIVIGDESKR 124
A + ++ D SK
Sbjct: 198 ADKAFILADSSKF 210
>gi|110802527|ref|YP_697880.1| transcription repressor of fructose operon fruR [Clostridium
perfringens SM101]
gi|110683028|gb|ABG86398.1| transcriptional regulator, DeoR family [Clostridium perfringens
SM101]
Length = 248
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A+ A + DG + + G+T E + L G + V+ + + + +
Sbjct: 79 KRAIAKYAASLIEDGDCIFIDAGTTTYELIDYL-----EGKDILVVSNGLSHIDTLIQKN 133
Query: 67 IPLHSPEDVSSVDL-SIDGFDEIDS------RLRLIKGYGGALLRE-----------KII 108
I + + +I G D + I G + K
Sbjct: 134 IKCYVIGGNIKISTKAITGCDALMCLSKFRFDKCFIGANGVHHIYGLTTPDTEEAILKEC 193
Query: 109 A-HAASRFIVIGDESKR 124
A + + + V+ D+SK
Sbjct: 194 AINNSRKSYVLADDSKF 210
>gi|310286951|ref|YP_003938209.1| transcriptional regulator, DeoR family [Bifidobacterium bifidum
S17]
gi|311063829|ref|YP_003970554.1| DeoR family transcriptional regulator [Bifidobacterium bifidum
PRL2010]
gi|309250887|gb|ADO52635.1| transcriptional regulator, DeoR family [Bifidobacterium bifidum
S17]
gi|310866148|gb|ADP35517.1| Transcriptional regulator,DeoR family [Bifidobacterium bifidum
PRL2010]
Length = 267
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 44/141 (31%), Gaps = 22/141 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA--------------------N 45
+K AR A+QYV G + +G G+TA F L +
Sbjct: 78 LKDAIAREAVQYVAPGDVIAIGGGTTAYVFAQHLLESQQASGITILTNSIPVAELVQALE 137
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLR 104
V+VI + T + V+ G + R L+ A
Sbjct: 138 SKDVEVIVTGGVTTRSNSLVGPIADKVIASLRVNTVFLGTHSVSIPRGFLMPNSLEAATD 197
Query: 105 EKIIAHAASRFIVIGDESKRV 125
+ A R +++ D +K
Sbjct: 198 M-AMMGIADRTVILTDHTKWS 217
>gi|239617459|ref|YP_002940781.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
gi|239506290|gb|ACR79777.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
Length = 269
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV 51
D + K+ A++ + V + + +GST F+ L +
Sbjct: 89 DVDE-KKLIAKKTVALVEKNDVIFVDSGSTTLFFIEELLKTPPINLTIVT 137
>gi|253583015|ref|ZP_04860233.1| transcription regulator [Fusobacterium varium ATCC 27725]
gi|251835221|gb|EES63764.1| transcription regulator [Fusobacterium varium ATCC 27725]
Length = 262
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 12/134 (8%), Positives = 37/134 (27%), Gaps = 14/134 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANGFRVQ 50
+ K+ + A + + +G+GST + + A+ +
Sbjct: 87 EAKKKIGKIAASLIHPNELIFIGSGSTTYYMINYIKDTSITVITNGIPHAEALNAKNIRA 146
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + + + + D + +++ ++ +K
Sbjct: 147 FLLCGFLKDKTRSVVGKETNKLIESYHFDQVFSSANGMNADFDILSTDEYEHNIKKSAVS 206
Query: 111 AASRFIVIGDESKR 124
++ D SK
Sbjct: 207 RGKVSYIMIDSSKF 220
>gi|222152351|ref|YP_002561526.1| DeoR family regulatory protein [Streptococcus uberis 0140J]
gi|222113162|emb|CAR40597.1| DeoR family regulatory protein [Streptococcus uberis 0140J]
Length = 247
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 49/163 (30%), Gaps = 24/163 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRKIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKRNIKIITNSCFIANFLRQYDSCQ 131
Query: 67 I-----PLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I +V+ VD G D + + + +A
Sbjct: 132 IILLGGNYQPNSEVTVGPLLKQMVDLFHVDRVFAGTDGFSPEVGFMCKDMMRCEGVQYMA 191
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEV 152
AA I++ D SK P + Q +++ + +
Sbjct: 192 DAAEETIILTDSSKFSK-------PSLVHQLSLDRVSRVITDK 227
>gi|313139639|ref|ZP_07801832.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313132149|gb|EFR49766.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 273
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K AR A+QYV G + +G G+TA F L +
Sbjct: 84 LKDAIAREAVQYVAPGDVIAIGGGTTAYVFAQHLLE 119
>gi|262043958|ref|ZP_06017042.1| glucitol operon repressor [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038684|gb|EEW39871.1| glucitol operon repressor [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 257
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------ 54
K A A++Y+ DG ++ + GST + + LL+ + N + S
Sbjct: 77 KKAQIAEAAVRYIHDGDSIILDAGSTVLQMVPLLSHFNNITVMTNSLHIVNALSEFDNEQ 136
Query: 55 ---------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NAGVTTFNEFYTVS 192
Query: 106 KIIAHAASRFIVIGDESKR 124
K + +AA I++ D SK
Sbjct: 193 KAMCNAAREVILMADSSKF 211
>gi|82778076|ref|YP_404425.1| DNA-bindng transcriptional repressor SrlR [Shigella dysenteriae
Sd197]
gi|309786212|ref|ZP_07680840.1| glucitol operon repressor [Shigella dysenteriae 1617]
gi|81242224|gb|ABB62934.1| regulator for glucitol operon [Shigella dysenteriae Sd197]
gi|308925957|gb|EFP71436.1| glucitol operon repressor [Shigella dysenteriae 1617]
Length = 257
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|218281470|ref|ZP_03487913.1| hypothetical protein EUBIFOR_00478 [Eubacterium biforme DSM 3989]
gi|218217392|gb|EEC90930.1| hypothetical protein EUBIFOR_00478 [Eubacterium biforme DSM 3989]
Length = 267
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 18/144 (12%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS 54
M K+ AR+A++Y+ DG T+ + GST L K + N ++ + S
Sbjct: 88 MTKNANEKQKIARKALEYIEDGSTIFLDPGSTTLALAKYLPLKKDLLVVTNSLKIAQVVS 147
Query: 55 SRNTENFCKIHHI----------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + ++ D +D + G D + + +
Sbjct: 148 ETKHDLIFLGGKMLKKAKSTTGAFTNNHLDALHIDCAFMGCDGF-MNMEGPTTFAFEEME 206
Query: 105 EKIIA-HAASRFIVIGDESKRVDF 127
K +++ ++ D SK +
Sbjct: 207 VKQHVLKNSTKKYLLADPSKFHET 230
>gi|225351747|ref|ZP_03742770.1| hypothetical protein BIFPSEUDO_03344 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158091|gb|EEG71374.1| hypothetical protein BIFPSEUDO_03344 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 236
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 78 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 113
>gi|317482589|ref|ZP_07941604.1| deoR family Bacterial regulatory protein [Bifidobacterium sp.
12_1_47BFAA]
gi|316916011|gb|EFV37418.1| deoR family Bacterial regulatory protein [Bifidobacterium sp.
12_1_47BFAA]
Length = 273
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 84 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 119
>gi|227546394|ref|ZP_03976443.1| DeoR family transcriptional regulator [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|291456180|ref|ZP_06595570.1| putative DeoR-type transcriptional regulator [Bifidobacterium breve
DSM 20213]
gi|227213375|gb|EEI81247.1| DeoR family transcriptional regulator [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|291381457|gb|EFE88975.1| putative DeoR-type transcriptional regulator [Bifidobacterium breve
DSM 20213]
Length = 267
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 78 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 113
>gi|24114004|ref|NP_708514.1| DNA-bindng transcriptional repressor SrlR [Shigella flexneri 2a
str. 301]
gi|30064066|ref|NP_838237.1| DNA-bindng transcriptional repressor SrlR [Shigella flexneri 2a
str. 2457T]
gi|24053121|gb|AAN44221.1| regulator for gut (srl), glucitol operon [Shigella flexneri 2a str.
301]
gi|30042322|gb|AAP18047.1| regulator for gut (srl), glucitol operon [Shigella flexneri 2a str.
2457T]
gi|281602076|gb|ADA75060.1| Regulator for gut (Srl), glucitol operon [Shigella flexneri
2002017]
gi|313648357|gb|EFS12801.1| glucitol operon repressor [Shigella flexneri 2a str. 2457T]
gi|332753932|gb|EGJ84307.1| glucitol operon repressor [Shigella flexneri K-671]
gi|332755705|gb|EGJ86068.1| glucitol operon repressor [Shigella flexneri 2747-71]
gi|332765658|gb|EGJ95871.1| deoR-like helix-turn-helix domain protein [Shigella flexneri
2930-71]
gi|333015819|gb|EGK35155.1| glucitol operon repressor [Shigella flexneri K-304]
Length = 257
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQIVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|16130614|ref|NP_417187.1| DNA-bindng transcriptional repressor [Escherichia coli str. K-12
substr. MG1655]
gi|89109494|ref|AP_003274.1| DNA-bindng transcriptional repressor [Escherichia coli str. K-12
substr. W3110]
gi|110806668|ref|YP_690188.1| DNA-binding transcriptional repressor SrlR [Shigella flexneri 5
str. 8401]
gi|157162153|ref|YP_001459471.1| DNA-binding transcriptional repressor SrlR [Escherichia coli HS]
gi|170019047|ref|YP_001724001.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli ATCC
8739]
gi|170082283|ref|YP_001731603.1| DNA-bindng transcriptional repressor [Escherichia coli str. K-12
substr. DH10B]
gi|188495915|ref|ZP_03003185.1| glucitol operon repressor [Escherichia coli 53638]
gi|191167072|ref|ZP_03028893.1| glucitol operon repressor [Escherichia coli B7A]
gi|193065020|ref|ZP_03046095.1| glucitol operon repressor [Escherichia coli E22]
gi|194427872|ref|ZP_03060418.1| glucitol operon repressor [Escherichia coli B171]
gi|194432973|ref|ZP_03065256.1| glucitol operon repressor [Shigella dysenteriae 1012]
gi|194438972|ref|ZP_03071056.1| glucitol operon repressor [Escherichia coli 101-1]
gi|209920146|ref|YP_002294230.1| DNA-binding transcriptional repressor SrlR [Escherichia coli SE11]
gi|238901844|ref|YP_002927640.1| DNA-bindng transcriptional repressor [Escherichia coli BW2952]
gi|253772438|ref|YP_003035269.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254037746|ref|ZP_04871804.1| glucitol operon repressor [Escherichia sp. 1_1_43]
gi|254162638|ref|YP_003045746.1| DNA-binding transcriptional repressor SrlR [Escherichia coli B str.
REL606]
gi|256024786|ref|ZP_05438651.1| DNA-bindng transcriptional repressor SrlR [Escherichia sp. 4_1_40B]
gi|260845349|ref|YP_003223127.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
O103:H2 str. 12009]
gi|297520153|ref|ZP_06938539.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli OP50]
gi|300815890|ref|ZP_07096114.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|300906796|ref|ZP_07124477.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300919267|ref|ZP_07135785.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300930561|ref|ZP_07145955.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300947020|ref|ZP_07161243.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|300954942|ref|ZP_07167357.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|301026629|ref|ZP_07190049.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|301305408|ref|ZP_07211502.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|301645317|ref|ZP_07245265.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|307139394|ref|ZP_07498750.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli H736]
gi|307314408|ref|ZP_07594013.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|309795166|ref|ZP_07689585.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|312973084|ref|ZP_07787257.1| glucitol operon repressor [Escherichia coli 1827-70]
gi|331643390|ref|ZP_08344521.1| glucitol operon repressor [Escherichia coli H736]
gi|121850|sp|P15082|SRLR_ECOLI RecName: Full=Glucitol operon repressor
gi|41630|emb|CAA31820.1| unnamed protein product [Escherichia coli]
gi|146282|gb|AAC13415.1| gut operon repressor (gutR) [Escherichia coli]
gi|882599|gb|AAA69216.1| CG Site No. 152; alternate gene name srlR [Escherichia coli str.
K-12 substr. MG1655]
gi|1789059|gb|AAC75749.1| DNA-bindng transcriptional repressor [Escherichia coli str. K-12
substr. MG1655]
gi|85675528|dbj|BAA16568.2| DNA-bindng transcriptional repressor [Escherichia coli str. K12
substr. W3110]
gi|110616216|gb|ABF04883.1| regulator for gut (srl), glucitol operon [Shigella flexneri 5 str.
8401]
gi|157067833|gb|ABV07088.1| glucitol operon repressor [Escherichia coli HS]
gi|169753975|gb|ACA76674.1| transcriptional regulator, DeoR family [Escherichia coli ATCC 8739]
gi|169890118|gb|ACB03825.1| DNA-bindng transcriptional repressor [Escherichia coli str. K-12
substr. DH10B]
gi|188491114|gb|EDU66217.1| glucitol operon repressor [Escherichia coli 53638]
gi|190902854|gb|EDV62582.1| glucitol operon repressor [Escherichia coli B7A]
gi|192927317|gb|EDV81936.1| glucitol operon repressor [Escherichia coli E22]
gi|194414105|gb|EDX30381.1| glucitol operon repressor [Escherichia coli B171]
gi|194418700|gb|EDX34786.1| glucitol operon repressor [Shigella dysenteriae 1012]
gi|194422093|gb|EDX38096.1| glucitol operon repressor [Escherichia coli 101-1]
gi|209913405|dbj|BAG78479.1| glucitol operon repressor [Escherichia coli SE11]
gi|226839370|gb|EEH71391.1| glucitol operon repressor [Escherichia sp. 1_1_43]
gi|238860995|gb|ACR62993.1| DNA-bindng transcriptional repressor [Escherichia coli BW2952]
gi|242378264|emb|CAQ33039.1| GutR transcriptional repressor [Escherichia coli BL21(DE3)]
gi|253323482|gb|ACT28084.1| transcriptional regulator, DeoR family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974539|gb|ACT40210.1| DNA-bindng transcriptional repressor [Escherichia coli B str.
REL606]
gi|253978706|gb|ACT44376.1| DNA-bindng transcriptional repressor [Escherichia coli BL21(DE3)]
gi|257760496|dbj|BAI31993.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
O103:H2 str. 12009]
gi|260448243|gb|ACX38665.1| transcriptional regulator, DeoR family [Escherichia coli DH1]
gi|299879644|gb|EFI87855.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|300318115|gb|EFJ67899.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|300401397|gb|EFJ84935.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300413638|gb|EFJ96948.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300453334|gb|EFK16954.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|300461565|gb|EFK25058.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300531819|gb|EFK52881.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|300839328|gb|EFK67088.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|301076387|gb|EFK91193.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|306905976|gb|EFN36497.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|308121137|gb|EFO58399.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|310333026|gb|EFQ00240.1| glucitol operon repressor [Escherichia coli 1827-70]
gi|315061983|gb|ADT76310.1| DNA-bindng transcriptional repressor [Escherichia coli W]
gi|315137314|dbj|BAJ44473.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli DH1]
gi|315254483|gb|EFU34451.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 85-1]
gi|315615092|gb|EFU95729.1| glucitol operon repressor [Escherichia coli 3431]
gi|320180873|gb|EFW55796.1| Glucitol operon repressor [Shigella boydii ATCC 9905]
gi|323159792|gb|EFZ45764.1| glucitol operon repressor [Escherichia coli E128010]
gi|323377435|gb|ADX49703.1| transcriptional regulator, DeoR family [Escherichia coli KO11]
gi|323935739|gb|EGB32053.1| deoR family protein Bacterial regulatory protein [Escherichia coli
E1520]
gi|323941463|gb|EGB37646.1| deoR family protein regulatory protein [Escherichia coli E482]
gi|323960634|gb|EGB56260.1| deoR family protein regulatory protein [Escherichia coli H489]
gi|323971504|gb|EGB66738.1| deoR family protein regulatory protein [Escherichia coli TA007]
gi|324017059|gb|EGB86278.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 117-3]
gi|331036861|gb|EGI09085.1| glucitol operon repressor [Escherichia coli H736]
gi|332087425|gb|EGI92553.1| glucitol operon repressor [Shigella boydii 5216-82]
gi|332088674|gb|EGI93787.1| glucitol operon repressor [Shigella dysenteriae 155-74]
gi|332344587|gb|AEE57921.1| glucitol operon repressor protein [Escherichia coli UMNK88]
gi|332753424|gb|EGJ83804.1| glucitol operon repressor [Shigella flexneri 4343-70]
gi|332999444|gb|EGK19029.1| glucitol operon repressor [Shigella flexneri VA-6]
gi|333000624|gb|EGK20201.1| glucitol operon repressor [Shigella flexneri K-218]
gi|333001045|gb|EGK20615.1| glucitol operon repressor [Shigella flexneri K-272]
gi|333015452|gb|EGK34791.1| glucitol operon repressor [Shigella flexneri K-227]
Length = 257
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|218701197|ref|YP_002408826.1| DNA-binding transcriptional repressor SrlR [Escherichia coli IAI39]
gi|218706201|ref|YP_002413720.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
UMN026]
gi|293406198|ref|ZP_06650124.1| srlR [Escherichia coli FVEC1412]
gi|293412062|ref|ZP_06654785.1| srlR [Escherichia coli B354]
gi|298381935|ref|ZP_06991532.1| srlR [Escherichia coli FVEC1302]
gi|300899943|ref|ZP_07118148.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|301027067|ref|ZP_07190442.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|331664258|ref|ZP_08365164.1| glucitol operon repressor [Escherichia coli TA143]
gi|331674215|ref|ZP_08374975.1| glucitol operon repressor [Escherichia coli TA280]
gi|218371183|emb|CAR19014.1| DNA-bindng transcriptional repressor [Escherichia coli IAI39]
gi|218433298|emb|CAR14198.1| DNA-bindng transcriptional repressor [Escherichia coli UMN026]
gi|284922643|emb|CBG35731.1| glucitol operon repressor [Escherichia coli 042]
gi|291426204|gb|EFE99236.1| srlR [Escherichia coli FVEC1412]
gi|291468833|gb|EFF11324.1| srlR [Escherichia coli B354]
gi|298277075|gb|EFI18591.1| srlR [Escherichia coli FVEC1302]
gi|300356511|gb|EFJ72381.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|300395211|gb|EFJ78749.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|331058189|gb|EGI30170.1| glucitol operon repressor [Escherichia coli TA143]
gi|331068309|gb|EGI39704.1| glucitol operon repressor [Escherichia coli TA280]
Length = 257
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|224282489|ref|ZP_03645811.1| DeoR-type transcriptional regulator [Bifidobacterium bifidum
NCIMB 41171]
Length = 234
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K AR A+QYV G + +G G+TA F L +
Sbjct: 45 LKDAIAREAVQYVAPGDVIAIGGGTTAYVFAQHLLE 80
>gi|170680292|ref|YP_001744854.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
SMS-3-5]
gi|300941077|ref|ZP_07155592.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|170518010|gb|ACB16188.1| glucitol operon repressor [Escherichia coli SMS-3-5]
gi|300454186|gb|EFK17679.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
Length = 257
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|313898800|ref|ZP_07832334.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
gi|312956382|gb|EFR38016.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
Length = 259
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 41/136 (30%), Gaps = 21/136 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE------- 59
K+ ARRA+ ++ D L + GST L ++ G V + +
Sbjct: 80 KQLIARRALDFIQDNTVLFLDPGSTILYLAKYL--RLRKGLTVVTNSLAIASMVSETTHQ 137
Query: 60 ----------NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+S D +D + G D + + K
Sbjct: 138 LMIAGGLLQKQGKAAIGGFTNSMIDAIHIDTAFMGCDGFL-DSFGPATFSHEEMEVKQHV 196
Query: 110 -HAASRFIVIGDESKR 124
A + I++ D SK
Sbjct: 197 LRKAQQRILLCDSSKF 212
>gi|21911290|ref|NP_665558.1| putative transcriptional regulator [Streptococcus pyogenes MGAS315]
gi|28896664|ref|NP_803014.1| transcriptional regulator [Streptococcus pyogenes SSI-1]
gi|21905504|gb|AAM80361.1| putative transcriptional regulator [Streptococcus pyogenes MGAS315]
gi|28811918|dbj|BAC64847.1| putative transcriptional regulator [Streptococcus pyogenes SSI-1]
Length = 248
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKRNIKIITNSCFIANYIRQYSSCQ 131
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 132 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 191
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 192 DAAEEVVILTDSSKFSKT 209
>gi|312133241|ref|YP_004000580.1| lacr-type lactose transport regulator [Bifidobacterium longum
subsp. longum BBMN68]
gi|322690588|ref|YP_004220158.1| transcriptional regulator [Bifidobacterium longum subsp. longum
JCM 1217]
gi|311772444|gb|ADQ01932.1| LacR-type lactose transport regulator [Bifidobacterium longum
subsp. longum BBMN68]
gi|320455444|dbj|BAJ66066.1| transcriptional regulator [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 241
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 48 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 83
>gi|291517300|emb|CBK70916.1| Transcriptional regulators of sugar metabolism [Bifidobacterium
longum subsp. longum F8]
Length = 238
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 45 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 80
>gi|323126394|gb|ADX23691.1| DeoR family regulatory protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 248
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN-----TENF 61
KR A +A + V D T+ + +GST +L N + N +
Sbjct: 72 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQNKRNIKIITNSCFIANYIRQYSSCQ 131
Query: 62 CKIHHIPLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ +V+ V+ G D + L + + +A
Sbjct: 132 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMSKDMMRSEGVRYMA 191
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 192 DAAEEVVILTDSSKFSKT 209
>gi|253682792|ref|ZP_04863587.1| DNA-binding protein IolR [Clostridium botulinum D str. 1873]
gi|253560991|gb|EES90445.1| DNA-binding protein IolR [Clostridium botulinum D str. 1873]
Length = 254
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 16/146 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRN---- 57
K A+ A + V D + + +G+T + L D+ I N + + +
Sbjct: 78 KYLIAKYASKLVEDNDIIFIDSGTTTVHMIPFLTDRKNLTIITNNLNILLKALPYSNVDI 137
Query: 58 -------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + + ++ + + +K +
Sbjct: 138 LSTGGTLFRETNSLIGVEASNFLKNYNISKAFMATTGFSIDKGVTNSSNFEYEVKKTVVE 197
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
+S I++ D SK + +E
Sbjct: 198 NSSNVILLADHSKLDTASLKTYCKLE 223
>gi|189439838|ref|YP_001954919.1| LacR family lactose transport regulator [Bifidobacterium longum
DJO10A]
gi|189428273|gb|ACD98421.1| LacR-type lactose transport regulator [Bifidobacterium longum
DJO10A]
Length = 237
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 48 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 83
>gi|83319812|ref|YP_424793.1| fructose operon transcriptional regulator [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
gi|4379141|emb|CAA83741.1| lac repressor [Mycoplasma capricolum subsp. capricolum ATCC 27343]
gi|83283698|gb|ABC01630.1| transcriptional regulator of the fructose operon, DeoR family
[Mycoplasma capricolum subsp. capricolum ATCC 27343]
Length = 232
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCK 63
Q K+ A +A++ + + + +GST LA + ++++ S N + K
Sbjct: 78 QAKQQIAIKALKKIKPKTCIFLDSGSTTYY----LAKILDPNLDLKIVTNSILNVQELSK 133
Query: 64 IHHIPLHSP--------------EDVSSVDLS-----IDGFDEIDSRLRLIKGYGGALLR 104
+H ++ + V+ + G + +D + +
Sbjct: 134 NNHQNIYLLGGKYQVVTSSILGYQAVNDLKNYSFDLSFIGINAVDEQNNIYTTSDDHAQL 193
Query: 105 EKIIAHAASRFIVIGDESKRVD 126
+ + +++ + D+SK+
Sbjct: 194 KIQVIKNSNKSYGLVDQSKKHS 215
>gi|46191122|ref|ZP_00206682.1| COG1349: Transcriptional regulators of sugar metabolism
[Bifidobacterium longum DJO10A]
Length = 248
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 59 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 94
>gi|331703777|ref|YP_004400464.1| transcription repressor of fructose operon [Mycoplasma mycoides
subsp. capri LC str. 95010]
gi|328802332|emb|CBW54486.1| Transcription repressor of fructose operon [Mycoplasma mycoides
subsp. capri LC str. 95010]
Length = 232
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCK 63
Q K+ A +A++ + + + +GST LA + ++++ S N + K
Sbjct: 78 QAKQQIAIKALKKIKPKTCIFLDSGSTTYY----LAKILDPNLDLKIVTNSILNVQELSK 133
Query: 64 IHHIPLHSP--------------EDVSSVDLS-----IDGFDEIDSRLRLIKGYGGALLR 104
+H ++ + V+ + G + +D + +
Sbjct: 134 NNHQNIYLLGGKYQVVTSSILGYQAVNDLKNYSFDLSFIGINAVDDQNNIYTTSDDHAQL 193
Query: 105 EKIIAHAASRFIVIGDESKRVD 126
+ + +++ + D+SK+
Sbjct: 194 KIQVIKNSNKSYGLVDQSKKHS 215
>gi|56808088|ref|ZP_00365881.1| COG1349: Transcriptional regulators of sugar metabolism
[Streptococcus pyogenes M49 591]
gi|71904397|ref|YP_281200.1| DeoR family transcriptional regulator [Streptococcus pyogenes
MGAS6180]
gi|209560178|ref|YP_002286650.1| Transcriptional regulator, DeoR family [Streptococcus pyogenes
NZ131]
gi|251781601|ref|YP_002995902.1| DeoR family transcriptional regulator [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|71803492|gb|AAX72845.1| transcriptional regulator, DeoR family [Streptococcus pyogenes
MGAS6180]
gi|209541379|gb|ACI61955.1| Transcriptional regulator, DeoR family [Streptococcus pyogenes
NZ131]
gi|242390229|dbj|BAH80688.1| transcriptional regulator, DeoR family [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 249
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 73 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKRNIKIITNSCFIANYIRQYSSCQ 132
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 133 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 192
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 193 DAAEEVVILTDSSKFSKT 210
>gi|152971564|ref|YP_001336673.1| DNA-binding transcriptional repressor SrlR [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238896161|ref|YP_002920897.1| DNA-binding transcriptional repressor SrlR [Klebsiella pneumoniae
NTUH-K2044]
gi|330007952|ref|ZP_08306124.1| transcriptional regulator, DeoR family [Klebsiella sp. MS 92-3]
gi|150956413|gb|ABR78443.1| regulator for gut (srl), glucitol operon [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238548479|dbj|BAH64830.1| glucitol operon repressor [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328535273|gb|EGF61763.1| transcriptional regulator, DeoR family [Klebsiella sp. MS 92-3]
Length = 257
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------ 54
K A A++Y+ DG ++ + GST + + LL+ + N + S
Sbjct: 77 KKAQIAEAAVRYIHDGDSIILDAGSTVLQMVPLLSHFNNITVMTNSLHIVNALSEFDNEQ 136
Query: 55 ---------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKR 124
K + +AA I++ D SK
Sbjct: 193 KAMCNAAREVILMADSSKF 211
>gi|139474511|ref|YP_001129227.1| DeoR family regulatory protein [Streptococcus pyogenes str.
Manfredo]
gi|134272758|emb|CAM31031.1| DeoR family regulatory protein [Streptococcus pyogenes str.
Manfredo]
Length = 248
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQNKRNIKIITNSCFIANYIRQYSSCQ 131
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 132 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 191
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 192 DAAEEVVILTDSSKFSKT 209
>gi|94991326|ref|YP_599426.1| DeoR family transcriptional regulator [Streptococcus pyogenes
MGAS10270]
gi|94995238|ref|YP_603336.1| DeoR family transcriptional regulator [Streptococcus pyogenes
MGAS10750]
gi|94544834|gb|ABF34882.1| Transcriptional regulator, DeoR family [Streptococcus pyogenes
MGAS10270]
gi|94548746|gb|ABF38792.1| Transcriptional regulator, DeoR family [Streptococcus pyogenes
MGAS10750]
Length = 249
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 73 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKRNIKIITNSCFIANYIRQYSSCQ 132
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 133 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 192
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 193 DAAEEVVILTDSSKFSKT 210
>gi|313665750|ref|YP_004047621.1| transcriptional regulator, DeoR family [Mycoplasma leachii PG50]
gi|312949383|gb|ADR23979.1| transcriptional regulator, DeoR family [Mycoplasma leachii PG50]
Length = 232
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCK 63
Q K+ A +A++ + + + +GST LA + ++++ S N + K
Sbjct: 78 QAKQQIAIKALKKIKPKTCIFLDSGSTTYY----LAKILDPNLDLKIVTNSILNVQELSK 133
Query: 64 IHHIPLHSP--------------EDVSSVDLS-----IDGFDEIDSRLRLIKGYGGALLR 104
+H ++ + V+ + G + +D + +
Sbjct: 134 NNHQNIYLLGGKYQVITSSILGYQAVNDLKNYAFDLSFIGINAVDDQNNIYTTSDDHAQL 193
Query: 105 EKIIAHAASRFIVIGDESKRVD 126
+ + +++ + D+SK+
Sbjct: 194 KIQVIKNSNKSYGLVDQSKKHS 215
>gi|297156097|gb|ADI05809.1| transcriptional regulator, DeoR family protein [Streptomyces
bingchenggensis BCW-1]
Length = 252
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 43/155 (27%), Gaps = 25/155 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT------EN 60
K A A V G +G+ G+T LA + G + T
Sbjct: 69 KERIADAAAGLVKAGAVVGLNGGTTTTAVARALAARPELGTEGAGPSLTVVTNALNIANE 128
Query: 61 FCKIHHIPLHSPEDVSSVDLS-------------------IDGFDEIDSRLRLIKGYGGA 101
H+ L V+ G D ID R G
Sbjct: 129 LVVRRHVKLVVTGGVARPASYELTGPLATEVLTRITLDHVFIGVDAIDVRYGATAQDEGE 188
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ +A A + +V+ D SK + P+E
Sbjct: 189 ADINRALALRAEQVVVVADSSKLGRRAFARICPVE 223
>gi|15675824|ref|NP_269998.1| putative transcriptional regulator [Streptococcus pyogenes M1 GAS]
gi|13623053|gb|AAK34719.1| putative transcriptional regulator [Streptococcus pyogenes M1 GAS]
Length = 248
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKRNIKVITNSCFIANYIRQYSSCQ 131
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 132 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 191
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 192 DAAEEVVILTDSSKFSKT 209
>gi|212716250|ref|ZP_03324378.1| hypothetical protein BIFCAT_01166 [Bifidobacterium catenulatum DSM
16992]
gi|212660762|gb|EEB21337.1| hypothetical protein BIFCAT_01166 [Bifidobacterium catenulatum DSM
16992]
Length = 267
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 44/141 (31%), Gaps = 22/141 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA--------------------N 45
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 78 LKDAIAQEAIKYVAPGDVIAVGGGTTAYVFAQHLLESQQSSGITILTNSIPVAELVQALE 137
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLR 104
V+VI + T + V+ G + R L+ A
Sbjct: 138 SKDVEVIVTGGVTTRSNSLVGPIADKVVASLRVNTVFLGTHSVSIPRGFLMPNSLEAATD 197
Query: 105 EKIIAHAASRFIVIGDESKRV 125
+ A R I++ D +K
Sbjct: 198 M-AMMDIADRTIILTDHTKWS 217
>gi|322688602|ref|YP_004208336.1| transcriptional regulator [Bifidobacterium longum subsp. infantis
157F]
gi|320459938|dbj|BAJ70558.1| transcriptional regulator [Bifidobacterium longum subsp. infantis
157F]
Length = 237
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AI+YV G + +G G+TA F L +
Sbjct: 48 LKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLE 83
>gi|311278345|ref|YP_003940576.1| transcriptional regulator, DeoR family [Enterobacter cloacae SCF1]
gi|308747540|gb|ADO47292.1| transcriptional regulator, DeoR family [Enterobacter cloacae SCF1]
Length = 257
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
K A+ A+Q++ DG ++ + GST + + LL+ + N + S
Sbjct: 78 KALIAQAAVQFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSEFDNEQT 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + +F + + DG D + + K
Sbjct: 138 ILMPGGTFRKKSASFHGQLAENAFEHFSFDRLFMGTDGIDL----NAGVTTFNEVYTVSK 193
Query: 107 IIAHAASRFIVIGDESKR 124
+ +AA I++ D SK
Sbjct: 194 AMCNAAREVILMADSSKF 211
>gi|257055468|ref|YP_003133300.1| transcriptional regulator, DeoR family [Saccharomonospora viridis
DSM 43017]
gi|256585340|gb|ACU96473.1| transcriptional regulator, DeoR family [Saccharomonospora viridis
DSM 43017]
Length = 282
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 25/139 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A A+++V GM +G+ G+T F A + + + V+ +S +
Sbjct: 80 KLAIASAALRFVEPGMAVGLSAGTTTWTF----AQLLRDLPNITVVTNSVQVADLFSQRP 135
Query: 67 IPLHSPEDVSSV---------DLSIDGFDEIDSRLRLI--------KGYGGALLRE---- 105
+ + ++ ++ + + G+ L E
Sbjct: 136 RTDQTVVLTGGIRTPSEALVGPFAVTAIRSVNLDIMFMGVHGMDVRSGFTTPNLMEAETD 195
Query: 106 KIIAHAASRFIVIGDESKR 124
+ A+ RF+V+ D +K
Sbjct: 196 RAFIEASRRFVVLADHTKY 214
>gi|251800097|ref|YP_003014828.1| DeoR family transcriptional regulator [Paenibacillus sp. JDR-2]
gi|247547723|gb|ACT04742.1| transcriptional regulator, DeoR family [Paenibacillus sp. JDR-2]
Length = 261
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 43/140 (30%), Gaps = 23/140 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A+ A++++ DGM++ + G+T + L ++ G ++ +
Sbjct: 78 KLAIAKEAVKHIQDGMSIILDAGTTVASMVDEL-ERFK-GLKIITRDLHTALMLSNEERF 135
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLR---------LIKGYGGALLREKIIAH------- 110
+ D I + + +L + +
Sbjct: 136 GSFDVYCSGGRISKWAYSLDGIYAEKMLQSLTVDAAFLTCEAVSLTKGAMAWSPNLVGVR 195
Query: 111 -----AASRFIVIGDESKRV 125
AA + I++ D +K
Sbjct: 196 QTTMEAAGKTILLADSNKFS 215
>gi|19746937|ref|NP_608073.1| transcriptional regulator [Streptococcus pyogenes MGAS8232]
gi|19749186|gb|AAL98572.1| putative transcriptional regulator [Streptococcus pyogenes
MGAS8232]
Length = 248
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQNKRNIKVITNSCFIANYIRQYSSCQ 131
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 132 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 191
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 192 DAAEEVVILTDSSKFSKT 209
>gi|71911561|ref|YP_283111.1| DeoR family transcriptional regulator [Streptococcus pyogenes
MGAS5005]
gi|94989388|ref|YP_597489.1| DeoR family transcriptional regulator [Streptococcus pyogenes
MGAS9429]
gi|94993279|ref|YP_601378.1| DeoR family transcriptional regulator [Streptococcus pyogenes
MGAS2096]
gi|306826530|ref|ZP_07459839.1| DeoR family transcriptional regulator [Streptococcus pyogenes ATCC
10782]
gi|71854343|gb|AAZ52366.1| transcriptional regulator, DeoR family [Streptococcus pyogenes
MGAS5005]
gi|94542896|gb|ABF32945.1| transcriptional regulator, DeoR family [Streptococcus pyogenes
MGAS9429]
gi|94546787|gb|ABF36834.1| Transcriptional regulator, DeoR family [Streptococcus pyogenes
MGAS2096]
gi|304431257|gb|EFM34257.1| DeoR family transcriptional regulator [Streptococcus pyogenes ATCC
10782]
Length = 249
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 73 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKRNIKVITNSCFIANYIRQYSSCQ 132
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 133 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 192
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 193 DAAEEVVILTDSSKFSKT 210
>gi|304390148|ref|ZP_07372102.1| DeoR family transcriptional regulator [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326630|gb|EFL93874.1| DeoR family transcriptional regulator [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 261
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
+ ++K+ A+ A + V G +G+ G+T E LA
Sbjct: 74 NQGRIKQRLAKAAAKMVKPGDVIGLNGGTTTTEVSRELA 112
>gi|283835564|ref|ZP_06355305.1| glucitol operon repressor [Citrobacter youngae ATCC 29220]
gi|291068774|gb|EFE06883.1| glucitol operon repressor [Citrobacter youngae ATCC 29220]
Length = 257
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 45/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A++Y+ DG ++ + GST + L++
Sbjct: 77 KKEQIAEAAVRYIHDGDSIILDAGSTVLQMVPMLTRFSNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NAGVTTFNEVFSVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|167766181|ref|ZP_02438234.1| hypothetical protein CLOSS21_00675 [Clostridium sp. SS2/1]
gi|167712261|gb|EDS22840.1| hypothetical protein CLOSS21_00675 [Clostridium sp. SS2/1]
Length = 261
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 17/143 (11%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI------P 53
M ++K + AR A+ Y+ + + + +G+T F +L D +
Sbjct: 74 MTQNIELKESIARAALPYIQNRHHIFLASGTTVHMFATMLKDSGTLNIVTDAVNISYELS 133
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSV----------DLSIDGFDEIDSRLRLIKGYGGALL 103
S N I +S + D + G + +D + G
Sbjct: 134 SYPNIHLISLGGEIRHNSLTTTGQIAESNLNSFQLDCAFIGVNAVDEEGNIFLGSMAEAS 193
Query: 104 REKIIAHAASRFIVIGDESKRVD 126
+++ H + DE+K +
Sbjct: 194 IVRLLCHMVPEIYFLADETKLMK 216
>gi|119963683|ref|YP_949050.1| DeoR family transcriptional regulator [Arthrobacter aurescens TC1]
gi|119950542|gb|ABM09453.1| putative transcriptional regulator, DeoR family [Arthrobacter
aurescens TC1]
Length = 262
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
K A A V +GM +G+G G+T LA ++ NG R+ V+ +S +
Sbjct: 80 KHAIAVEAASLVQEGMAIGLGAGTTTW----ALAKELVNGPRITVVTNSVRIADLFH 132
>gi|50915094|ref|YP_061066.1| DeoR family transcriptional regulator [Streptococcus pyogenes
MGAS10394]
gi|50904168|gb|AAT87883.1| Transcriptional regulator, DeoR family [Streptococcus pyogenes
MGAS10394]
Length = 249
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 17/138 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 73 KRRIAEKAAELVQDNDTIMIESGSTCALLAEVLCQNKRNIKVITNSCFIANYIRQYSSCQ 132
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ G+ L K +A
Sbjct: 133 IILLGGYYQPNSEVTVGPLLKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMA 192
Query: 110 HAASRFIVIGDESKRVDF 127
AA +++ D SK
Sbjct: 193 DAAEEVVILTDSSKFSKT 210
>gi|145300452|ref|YP_001143293.1| DNA-bindng transcriptional repressor SrlR [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142853224|gb|ABO91545.1| glucitol/sorbitol operon transcriptional repressor [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 254
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI-------------- 52
K+ +A V +G ++ + +GST + + LA+ + +
Sbjct: 80 KQRIGAKAASLVQNGESIVLDSGSTTLQMVPWLAEHVGLKLMTNSLHIMNEAAALESSLT 139
Query: 53 ------PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + +F + + DGFD I + A +
Sbjct: 140 LLMPGGTYRKRSASFHGKSAEQAFRDFTFDKLFIGADGFDVEQG----ITTFNEAYQVSQ 195
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ +A + IV+ D K ++P
Sbjct: 196 AMCQSAKKIIVVTDSCKFGQRTPNVVVP 223
>gi|295705582|ref|YP_003598657.1| DNA-binding protein IolR [Bacillus megaterium DSM 319]
gi|294803241|gb|ADF40307.1| DNA-binding protein IolR [Bacillus megaterium DSM 319]
Length = 251
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
KR A+ A QYV DG + + +G+T E + L DK
Sbjct: 77 KRLIAKTAAQYVEDGDVIFIDSGTTTLEMIEFLKDK 112
>gi|225420457|ref|ZP_03762760.1| hypothetical protein CLOSTASPAR_06802 [Clostridium asparagiforme
DSM 15981]
gi|225040902|gb|EEG51148.1| hypothetical protein CLOSTASPAR_06802 [Clostridium asparagiforme
DSM 15981]
Length = 172
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++ KR A V G T+ + +G+T + +A +I + + VI T
Sbjct: 7 TMMEEKRLLAEACAAMVKPGDTVFLDSGTT----IYEIAKRIMDIPDLTVITDDIETGFL 62
Query: 62 CKI-------------------HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ V ++ G ID+ ++
Sbjct: 63 LHRSGVELMICGGTVQKETGSIFGTFSNQMMSYIHVGIAFMGAMSIDANFNVLTPTLDKA 122
Query: 103 LREKIIAHAASRFIVIGDESKR 124
++++ A++ ++ D SK
Sbjct: 123 SLKRMVTKNANKSYLVVDHSKF 144
>gi|294500228|ref|YP_003563928.1| DNA-binding protein IolR [Bacillus megaterium QM B1551]
gi|294350165|gb|ADE70494.1| DNA-binding protein IolR [Bacillus megaterium QM B1551]
Length = 251
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
KR A+ A QYV DG + + +G+T E + L DK
Sbjct: 77 KRLIAKTAAQYVEDGDVIFIDSGTTTLEMIEFLKDK 112
>gi|302845517|ref|XP_002954297.1| hypothetical protein VOLCADRAFT_95072 [Volvox carteri f.
nagariensis]
gi|300260502|gb|EFJ44721.1| hypothetical protein VOLCADRAFT_95072 [Volvox carteri f.
nagariensis]
Length = 242
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 68/227 (29%), Gaps = 44/227 (19%)
Query: 5 QMKRNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ KR AA+ + ++ G LG+G G V +P +
Sbjct: 15 ESKRAAAKACVDRFICSGTLLGLGPG----------------EMDVVGVPVCDAAAHEAA 58
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAAS--RFIVIGDE 121
H +PL + + + + D+ D AL+ R +
Sbjct: 59 FHGVPLVADGRATEAAVVVADADQFD------MKANAALVGCAAEPQQPDVPRLLAALTT 112
Query: 122 SKRVDFLGRGMLPIEID---QFGVNKTLSALKEVASCFGLNEELRLR---------RNGS 169
P+ + + +++ F + EL R R G
Sbjct: 113 RGSASGSSSDTGPVLVLLVESSRADSWEEHAEQLDDIFLGDAELWRRSFAGQPENPRGGD 172
Query: 170 GLFVSDGGNYIVDAFF-------GFIPDPQIISGELCNIPGVIEHGL 209
+VS G IVD F G I+ E+ + GV HGL
Sbjct: 173 HPYVSPQGYTIVDVRFYEGLKLYGENEPYDKIADEVQQVAGVAGHGL 219
>gi|332362325|gb|EGJ40125.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1056]
Length = 251
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNHHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKISKEDFTSICPL 224
>gi|309800131|ref|ZP_07694320.1| transcriptional repressor of the fructose operon [Streptococcus
infantis SK1302]
gi|308116234|gb|EFO53721.1| transcriptional repressor of the fructose operon [Streptococcus
infantis SK1302]
Length = 246
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 31/153 (20%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + GST + L + V+ +S +
Sbjct: 77 QEKKLIAQKAASLIKEKDVIFVDAGSTTAFLIKEL-----ERKDITVVTNSIHHAVQLVD 131
Query: 65 HHIPL-----------------HSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGAL 102
IP + ++ + + ++G DE ++
Sbjct: 132 KQIPTVIIGGGVKMTTDASIGGVALNQINQLHFDRAFIGMNGVDEGYYTTPDMEEGAV-- 189
Query: 103 LREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ I A + V+ D SK + PI
Sbjct: 190 --KRAILENAKQTYVLADSSKVGQSCFAKVAPI 220
>gi|307303429|ref|ZP_07583183.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
BL225C]
gi|306902820|gb|EFN33412.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
BL225C]
Length = 278
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 9/84 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K R+A + V DGM + + +G+T L G R + ++
Sbjct: 101 AKAAIGRKAAELVKDGMVVFLDSGTTTLAVAHALG-----GLRDLTVCTTG----LAIAL 151
Query: 66 HIPLHSPEDVSSVDLSIDGFDEID 89
H+ V + ID +E
Sbjct: 152 HMCRQPQVRVHMLGGEIDPAEEAA 175
>gi|261867964|ref|YP_003255886.1| DeoR family transcriptional regulator [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413296|gb|ACX82667.1| DeoR family transcriptional regulator [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 252
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 17/148 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD---------------KIANGFRVQV 51
K A+ A + +G T+ + +GST L +++ + +
Sbjct: 79 KIRIAKAAAGLIKEGDTIILDSGSTTMMIANELLKIKNITVITNNLPAAFVLSDSVDITL 138
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVS-SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + + H + D+ G D ID + + + I+A
Sbjct: 139 VICGGYVRHKTRSMHGTIAEHTLNGIRADIMFVGADGIDP-INGLTTFNEGYHISSIMAK 197
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIEID 138
A+S+ + + D +K +LP+ +
Sbjct: 198 ASSKVVCVADSTKFNRNGFNQVLPMSVV 225
>gi|237807077|ref|YP_002891517.1| transcriptional regulator, DeoR family [Tolumonas auensis DSM 9187]
gi|237499338|gb|ACQ91931.1| transcriptional regulator, DeoR family [Tolumonas auensis DSM 9187]
Length = 257
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 46/145 (31%), Gaps = 18/145 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A+ A+Q++ D + + +GST + LLA K + ++
Sbjct: 79 KLAIAQAAVQHIRDHNRIIIDSGSTTGAMIPLLATKRGLVVMTNSLTVAQALRELENEPT 138
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + + G D +D I + + +++A
Sbjct: 139 LLMTGGTWDPHSEAFQGQVAEQVLRSYDFDQLFIGADGVDPARGTI-TFNELVGLSRVMA 197
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
A IV+ D K + LP
Sbjct: 198 EVAREVIVLVDSEKFGRRIPNLELP 222
>gi|256397019|ref|YP_003118583.1| DeoR family transcriptional regulator [Catenulispora acidiphila DSM
44928]
gi|256363245|gb|ACU76742.1| transcriptional regulator, DeoR family [Catenulispora acidiphila
DSM 44928]
Length = 267
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 19/140 (13%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ K AR A + V G +G+ GST F LA ++ + V P +
Sbjct: 76 QRRAKEAIARAASELVRPGTAIGVSAGSTTYAFAQQLA-RVPDLTVVTNSPPVAELLHAL 134
Query: 63 KIHHIPLHSPEDVSSV------DLSIDGFDEIDSRLRLI--------KGYGGALLRE--- 105
+ V ++ ++ID + I G+ L E
Sbjct: 135 PGPPQTVILTGGVRTISDALVGPVAIDAIRRLHLDCVFIGVHGIDAEAGFTSPNLMEAET 194
Query: 106 -KIIAHAASRFIVIGDESKR 124
+++ A R +V+ D +K
Sbjct: 195 NRMLVSTAQRLVVMADHTKW 214
>gi|157148244|ref|YP_001455563.1| DNA-binding transcriptional repressor SrlR [Citrobacter koseri ATCC
BAA-895]
gi|157085449|gb|ABV15127.1| hypothetical protein CKO_04061 [Citrobacter koseri ATCC BAA-895]
Length = 257
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A+ A+Q++ DG ++ + GST + L++
Sbjct: 77 KKALIAQAAVQFIHDGDSIILDAGSTVLQMVPMLTRFSNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|16080173|ref|NP_390999.1| DeoR family transcriptional regulator [Bacillus subtilis subsp.
subtilis str. 168]
gi|221311062|ref|ZP_03592909.1| hypothetical protein Bsubs1_16966 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315388|ref|ZP_03597193.1| hypothetical protein BsubsN3_16877 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320305|ref|ZP_03601599.1| hypothetical protein BsubsJ_16850 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324588|ref|ZP_03605882.1| hypothetical protein BsubsS_16996 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321312660|ref|YP_004204947.1| putative DeoR family transcriptional regulator [Bacillus subtilis
BSn5]
gi|3123164|sp|O05261|YULB_BACSU RecName: Full=Uncharacterized HTH-type transcriptional regulator
yulB
gi|1934822|emb|CAB07948.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2635605|emb|CAB15099.1| putative transcriptional regulator (DeoR family) [Bacillus subtilis
subsp. subtilis str. 168]
gi|291485561|dbj|BAI86636.1| hypothetical protein BSNT_04590 [Bacillus subtilis subsp. natto
BEST195]
gi|320018934|gb|ADV93920.1| putative transcriptional regulator (DeoR family) protein [Bacillus
subtilis BSn5]
Length = 258
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 17/134 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD--------------KIANGFRVQVI 52
K+ A A +YV G + + +TA +L D +++N + VI
Sbjct: 79 KKAIAHEAAKYVKSGDRIILDASTTAWYMAKILPDIELTVITNSMKAAIELSNKENISVI 138
Query: 53 PSSRNTENFCKIHHIPLHSPE-DVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAH 110
+ PL + V+ + D ALL +K +
Sbjct: 139 STGGILLEKSLSFAGPLAERSLETYHVNKTFLSCKGFDVHNGMSDSNEWQALL-KKRMIE 197
Query: 111 AASRFIVIGDESKR 124
+ + I++ D SK
Sbjct: 198 RSDQTILMADSSKW 211
>gi|16264721|ref|NP_437513.1| putative transcriptional regulator, gntR family protein
[Sinorhizobium meliloti 1021]
gi|15140859|emb|CAC49373.1| putative transcriptional regulator [Sinorhizobium meliloti 1021]
Length = 261
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 9/84 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K R+A + V DGM + + +G+T L G R + ++
Sbjct: 84 AKAAIGRKAAELVKDGMVVFLDSGTTTLAVAHALG-----GLRDLTVCTTG----LAIAL 134
Query: 66 HIPLHSPEDVSSVDLSIDGFDEID 89
H+ V + ID +E
Sbjct: 135 HMCRQPQVRVHMLGGEIDPAEEAA 158
>gi|227500212|ref|ZP_03930281.1| DeoR family transcriptional regulator [Anaerococcus tetradius ATCC
35098]
gi|227217734|gb|EEI83038.1| DeoR family transcriptional regulator [Anaerococcus tetradius ATCC
35098]
Length = 229
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 51/142 (35%), Gaps = 17/142 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQV 51
K+ ++A ++ D + + GST E + + + +A G +
Sbjct: 78 KKLIGKKAASFIKDKSLVYIDAGSTTSELIDFIEARQIRIVTNGLMHINKLVAKGLDTII 137
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ + + ++ + S DL+ G + D AL++ K+I
Sbjct: 138 LGGKLKAKTMATTGLVAMNEL-ENFSFDLAFVGANGYDDDYFYTADINEALIKRKVIE-L 195
Query: 112 ASRFIVIGDESKRVDFLGRGML 133
+ + V+ D SK +F +
Sbjct: 196 SDKAFVLADRSKAHNFYHAKIC 217
>gi|168186475|ref|ZP_02621110.1| DNA-binding protein IolR [Clostridium botulinum C str. Eklund]
gi|169295585|gb|EDS77718.1| DNA-binding protein IolR [Clostridium botulinum C str. Eklund]
Length = 254
Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 16/148 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRN-- 57
+ K A+ A + V D + + +G+T + L DK I N + + +
Sbjct: 76 EEKYLIAKSASELVEDNDIIFIDSGTTTVHMIPFLNDKKNLTIITNNLNILMKALPYSNV 135
Query: 58 ---------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + ++ + + +K +
Sbjct: 136 DILSTGGTLFRETNSLIGIEASNFLKNYNISKAFMATTGFSIEKGVTNSSNFEYDVKKTV 195
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIE 136
+S I++ D SK + +E
Sbjct: 196 VENSSNVILLADHSKLDTASLKTYCNLE 223
>gi|254476865|ref|ZP_05090251.1| transcriptional regulator, DeoR family [Ruegeria sp. R11]
gi|214031108|gb|EEB71943.1| transcriptional regulator, DeoR family [Ruegeria sp. R11]
Length = 259
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A A+ ++ DGMT+ + GST L D+
Sbjct: 81 EEKKQIATAALAHIGDGMTVFLDVGSTTAYVAKELRDR 118
>gi|269118681|ref|YP_003306858.1| DeoR family transcriptional regulator [Sebaldella termitidis ATCC
33386]
gi|268612559|gb|ACZ06927.1| transcriptional regulator, DeoR family [Sebaldella termitidis ATCC
33386]
Length = 247
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 55/134 (41%), Gaps = 15/134 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++K A++A Y+ D T+ +G G+T + + + K + S+ + K+
Sbjct: 77 KLKEQVAKKAAGYINDNDTIFIGPGTTTEMVLKYIKTKNNTIITNSLSAFSKYSSLPYKL 136
Query: 65 HHIPLHSPEDVS--------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
P + + S +VD++ G + I+ +L+ ++II +
Sbjct: 137 IIAPGYLRTETSAVIGTFTNNFLKKINVDIAFSGANCIN-DSQLMSSNEEEGTAQEIILN 195
Query: 111 AASRFIVIGDESKR 124
A + ++ D +K
Sbjct: 196 NAKKRFLLVDSTKF 209
>gi|331270131|ref|YP_004396623.1| DeoR family transcriptional regulator [Clostridium botulinum
BKT015925]
gi|329126681|gb|AEB76626.1| transcriptional regulator, DeoR family [Clostridium botulinum
BKT015925]
Length = 254
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 42/146 (28%), Gaps = 16/146 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRN---- 57
K A A + V D + + +G+T + L D+ I N + + +
Sbjct: 78 KYLIAEYASKLVEDNDIIFIDSGTTTVHMIPFLNDRKNLTIITNNLNILLKALPYSNVDI 137
Query: 58 -------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + + ++ + + +K +
Sbjct: 138 LSTGGTLFRETNSLIGVEASNFLKNYNISKAFMATTGFSIDKGVTNSSNFEYDVKKTVVE 197
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
+S I++ D SK + +E
Sbjct: 198 NSSNVILLADHSKLDTASLKTYCNLE 223
>gi|167745729|ref|ZP_02417856.1| hypothetical protein ANACAC_00422 [Anaerostipes caccae DSM 14662]
gi|167654760|gb|EDR98889.1| hypothetical protein ANACAC_00422 [Anaerostipes caccae DSM 14662]
Length = 265
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 15/148 (10%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQ--------- 50
++ K+ R A +V DG + + TG+T + +++K I N +V
Sbjct: 88 MEEKKAICRLAADHVKDGDIIYIDTGTTCHNLVDYISEKRCTIITNSLQVSLKALPYENL 147
Query: 51 --VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + + ++ + + L ++ +
Sbjct: 148 TVISLPGYLKRETLSFVDVKIADYLKAFNIGKAFMACTGLSMENGLTNASEEEYRVKEAV 207
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ V+ D SK F P+E
Sbjct: 208 TANSMERFVLADHSKFGIFSLMTYCPLE 235
>gi|317470468|ref|ZP_07929856.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
gi|316901983|gb|EFV23909.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
Length = 254
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 15/148 (10%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQ--------- 50
++ K+ R A +V DG + + TG+T + +++K I N +V
Sbjct: 77 MEEKKAICRLAADHVKDGDIIYIDTGTTCHNLVDYISEKRCTIITNSLQVSLKALPYENL 136
Query: 51 --VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + + ++ + + L ++ +
Sbjct: 137 TVISLPGYLKRETLSFVDVKIADYLKAFNIGKAFMACTGLSMENGLTNASEEEYRVKEAV 196
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ V+ D SK F P+E
Sbjct: 197 TANSMERFVLADHSKFGIFSLMTYCPLE 224
>gi|315186251|gb|EFU20012.1| transcriptional regulator, DeoR family [Spirochaeta thermophila DSM
6578]
Length = 275
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 24/144 (16%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+++K R+A ++V T+ + +G+T LA I + ++VI ++ N
Sbjct: 76 MELKARIGRKAAEFVEPNSTIILDSGTTVT----ELAKNIIHIQGLRVITNALNIALLLG 131
Query: 64 IHHIPLHSPE--DVSSVDLSIDG------FDEIDSRLRLIKGYGGAL-----------LR 104
+ + LS+ G FD + + + G +L L
Sbjct: 132 VEPTIEIHMTGGEFKRPTLSLTGEKAASFFDNMHADRLFLAAAGVSLREGLTYPGISDLP 191
Query: 105 EKI-IAHAASRFIVIGDESKRVDF 127
K + ++ ++ D +K
Sbjct: 192 VKRAMIESSDEVFLLVDSTKIHKH 215
>gi|313158547|gb|EFR57941.1| transcriptional regulator, DeoR family [Alistipes sp. HGB5]
Length = 303
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 24/139 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV--------------- 51
KR A+RA++ + D ++ + +GST F + + + +
Sbjct: 126 KRLIAQRALELLEDNDSIIVASGSTIYAFAEEIKARQWHHLNIVTPFLRLGVLLNEAENV 185
Query: 52 -IPSSRNTEN---FCKIHHIPLHSPED--VSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ T + + S +D S + +DG D A L
Sbjct: 186 NVVQLGGTVHKKSLSVLGEEAARSLDDCICSKLFFGVDGID--LEHGITTSTIDEAKLTR 243
Query: 106 KIIAHAASRFIVIGDESKR 124
K++ A+S+ IV+ D SK
Sbjct: 244 KMM-KASSQNIVLADSSKF 261
>gi|320159817|ref|YP_004173041.1| DeoR family transcriptional regulator [Anaerolinea thermophila
UNI-1]
gi|319993670|dbj|BAJ62441.1| DeoR family transcriptional regulator [Anaerolinea thermophila
UNI-1]
Length = 258
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 46/150 (30%), Gaps = 18/150 (12%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------AN 45
K R A V DG T+ +G+G+T E L ++
Sbjct: 80 QADEKARIGRLAATLVQDGETVFLGSGTTVLEIAKHLRERKGLTIITNSLPVVNLFAGME 139
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+V + I HI + +V D G +D L Y + +
Sbjct: 140 HIQVVCLGGILRDSELSFIGHITEQALSEV-RADKVFLGVRAVDLEHGLTNDYLPETMTD 198
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I IV+ D +K + P+
Sbjct: 199 RAILKIGREVIVVADHTKCCRVSTAFLAPL 228
>gi|84502543|ref|ZP_01000679.1| transcriptional regulator, DeoR family protein [Oceanicola
batsensis HTCC2597]
gi|84389355|gb|EAQ02152.1| transcriptional regulator, DeoR family protein [Oceanicola
batsensis HTCC2597]
Length = 258
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 47/140 (33%), Gaps = 16/140 (11%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS 54
M L+ K ARRA V G TL + G+T F LA I N V
Sbjct: 71 MTAQLRAKSEIARRAAALVQPGQTLFVDAGTTTSIFARELAKLSGISVITNSLDVATTLQ 130
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLS------IDGFDEIDSRLRLIKGYGGALLREKII 108
+ + P V + L+ D + KG L+E I
Sbjct: 131 GAGRQVLLLGGRMAADVPATVGELTLAEIWRFHADVCFSAPVAVHPAKGAFFYDLQEAEI 190
Query: 109 AHA----ASRFIVIGDESKR 124
A A A R I++ D SK
Sbjct: 191 ASAMSAQAPRSILLADHSKL 210
>gi|170691569|ref|ZP_02882734.1| transcriptional regulator, DeoR family [Burkholderia graminis
C4D1M]
gi|170143774|gb|EDT11937.1| transcriptional regulator, DeoR family [Burkholderia graminis
C4D1M]
Length = 256
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 29/155 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A+ AI + G TL + G+T LA+++A + ++ +S + +
Sbjct: 76 KTAIAKAAIGLIASGQTLFIDAGTTTA----ALAEELAKLANLTIVTNSIDVALKMRGAA 131
Query: 67 IPLHSPEDVSSV-------DLSIDGFDEID-----------------SRLRLIKGYGGAL 102
+ +V + ++ G + Y A
Sbjct: 132 EQSEAGNEVILLGGTISDRAMATTGATTVLDIQRYRADLALLSPVGIDHRHGATNYDHAE 191
Query: 103 LRE-KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + A R +++ D SK P+E
Sbjct: 192 TEVARAMVANADRVVILADYSKIGQRSRISYCPVE 226
>gi|197247771|ref|YP_002147734.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197211474|gb|ACH48871.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 257
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 44/153 (28%), Gaps = 24/153 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A++Y+ DG ++ + GST + L++
Sbjct: 77 KKALIAAAAVKYIHDGDSIILDAGSTVLQMVPLLSRFSNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NVGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ +AA I++ D SK + +E
Sbjct: 193 NAMCNAAREVILMADSSKFGRKSPNVVCSLETV 225
>gi|229815958|ref|ZP_04446280.1| hypothetical protein COLINT_03011 [Collinsella intestinalis DSM
13280]
gi|229808417|gb|EEP44197.1| hypothetical protein COLINT_03011 [Collinsella intestinalis DSM
13280]
Length = 278
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 17/148 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ-------------V 51
K++ AR A++ V DG T+ + +G+TA EF+ +L +
Sbjct: 93 DAKQSIARAALELVRDGDTVFVDSGTTALEFVRMLDMRTGITIITADITIADYIDESLPS 152
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA---LLREKII 108
+ K H + + D +G+ + K
Sbjct: 153 VDVIMLGGELRKGHRYLFGPLTMAAIATIHADLAVICPGAFVAGRGFVTDFPQMAEIKQA 212
Query: 109 A-HAASRFIVIGDESKRVDFLGRGMLPI 135
A AAS + + D SK PI
Sbjct: 213 AMSAASHSVALMDASKLTSRGTYCFAPI 240
>gi|16761614|ref|NP_457231.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16766143|ref|NP_461758.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29143098|ref|NP_806440.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56414789|ref|YP_151864.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62181340|ref|YP_217757.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161615737|ref|YP_001589702.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|167550325|ref|ZP_02344082.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994138|ref|ZP_02575230.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168230895|ref|ZP_02655953.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168235867|ref|ZP_02660925.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168242565|ref|ZP_02667497.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262051|ref|ZP_02684024.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168464039|ref|ZP_02697956.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820477|ref|ZP_02832477.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194445233|ref|YP_002042078.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194450128|ref|YP_002046797.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194472410|ref|ZP_03078394.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737783|ref|YP_002115789.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197264852|ref|ZP_03164926.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363717|ref|YP_002143354.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|198245307|ref|YP_002216808.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200389172|ref|ZP_03215784.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927974|ref|ZP_03219174.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205353781|ref|YP_002227582.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|207858101|ref|YP_002244752.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213051945|ref|ZP_03344823.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213426131|ref|ZP_03358881.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213621915|ref|ZP_03374698.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
gi|213648106|ref|ZP_03378159.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|213852361|ref|ZP_03381893.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
gi|224584615|ref|YP_002638413.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|238909604|ref|ZP_04653441.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|289824457|ref|ZP_06544033.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|25302845|pir||AI0844 glucitol operon repressor [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16421382|gb|AAL21717.1| transcriptional repressor for glucitol operon [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16503915|emb|CAD05944.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138731|gb|AAO70300.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129046|gb|AAV78552.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62128973|gb|AAX66676.1| transcriptional repressor for glucitol operon (DeoR family)
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161365101|gb|ABX68869.1| hypothetical protein SPAB_03528 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403896|gb|ACF64118.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408432|gb|ACF68651.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458774|gb|EDX47613.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713285|gb|ACF92506.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633707|gb|EDX52121.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197095194|emb|CAR60745.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197243107|gb|EDY25727.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197290671|gb|EDY30025.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197939823|gb|ACH77156.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199606270|gb|EDZ04815.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204322296|gb|EDZ07493.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273562|emb|CAR38549.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324784|gb|EDZ12623.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327940|gb|EDZ14704.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205334399|gb|EDZ21163.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205338047|gb|EDZ24811.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342932|gb|EDZ29696.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349219|gb|EDZ35850.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206709904|emb|CAR34257.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469142|gb|ACN46972.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247973|emb|CBG25806.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994957|gb|ACY89842.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301159397|emb|CBW18915.1| glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913855|dbj|BAJ37829.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320087240|emb|CBY97005.1| Glycerol-3-phosphate regulon repressor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223390|gb|EFX48456.1| Glucitol operon repressor [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614344|gb|EFY11275.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322621591|gb|EFY18444.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322624452|gb|EFY21285.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322628783|gb|EFY25566.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322633490|gb|EFY30232.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322635934|gb|EFY32642.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322639642|gb|EFY36327.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322646825|gb|EFY43328.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650593|gb|EFY46998.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322654795|gb|EFY51114.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322659015|gb|EFY55268.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322664418|gb|EFY60612.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322668333|gb|EFY64490.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322673687|gb|EFY69788.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322677748|gb|EFY73811.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322681422|gb|EFY77454.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322683824|gb|EFY79834.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|322715823|gb|EFZ07394.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323131188|gb|ADX18618.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|323193787|gb|EFZ78990.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323200257|gb|EFZ85339.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323203240|gb|EFZ88269.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323205513|gb|EFZ90478.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323212801|gb|EFZ97612.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323216327|gb|EGA01054.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323221075|gb|EGA05506.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323226896|gb|EGA11078.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323230820|gb|EGA14938.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323234829|gb|EGA18915.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323238868|gb|EGA22918.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323241568|gb|EGA25599.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323248285|gb|EGA32221.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323251131|gb|EGA35004.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323255830|gb|EGA39578.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323263149|gb|EGA46687.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323264346|gb|EGA47852.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271173|gb|EGA54601.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326624567|gb|EGE30912.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|326628889|gb|EGE35232.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
gi|332989709|gb|AEF08692.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 257
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 44/153 (28%), Gaps = 24/153 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A++Y+ DG ++ + GST + L++
Sbjct: 77 KKALIAAAAVKYIHDGDSIILDAGSTVLQMVPLLSRFSNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NVGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ +AA I++ D SK + +E
Sbjct: 193 NAMCNAAREVILMADSSKFGRKSPNVVCSLETV 225
>gi|213692920|ref|YP_002323506.1| transcriptional regulator, DeoR family [Bifidobacterium longum
subsp. infantis ATCC 15697]
gi|213524381|gb|ACJ53128.1| transcriptional regulator, DeoR family [Bifidobacterium longum
subsp. infantis ATCC 15697]
Length = 267
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AIQYV G + +G G+TA F L +
Sbjct: 78 LKGAIAQEAIQYVAPGDVIAIGGGTTAYVFAQHLLE 113
>gi|320536446|ref|ZP_08036481.1| DeoR-like helix-turn-helix protein [Treponema phagedenis F0421]
gi|320146715|gb|EFW38296.1| DeoR-like helix-turn-helix protein [Treponema phagedenis F0421]
Length = 282
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A YV D + + +G+T + L DK
Sbjct: 101 KKQIAQVACDYVKDKDIIFIDSGTTTCHMIEWLQDK 136
>gi|330970304|gb|EGH70370.1| regulatory protein, DeoR [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 255
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D + L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|15832817|ref|NP_311590.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O157:H7
str. Sakai]
gi|168749969|ref|ZP_02774991.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4113]
gi|168755451|ref|ZP_02780458.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4401]
gi|168762895|ref|ZP_02787902.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4501]
gi|168768797|ref|ZP_02793804.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4486]
gi|168774762|ref|ZP_02799769.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4196]
gi|168778688|ref|ZP_02803695.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4076]
gi|168787961|ref|ZP_02812968.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC869]
gi|168800213|ref|ZP_02825220.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC508]
gi|195938456|ref|ZP_03083838.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O157:H7
str. EC4024]
gi|208805889|ref|ZP_03248226.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4206]
gi|208813100|ref|ZP_03254429.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4045]
gi|208820179|ref|ZP_03260499.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4042]
gi|209398484|ref|YP_002272169.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4115]
gi|217327486|ref|ZP_03443569.1| glucitol operon repressor [Escherichia coli O157:H7 str. TW14588]
gi|254794647|ref|YP_003079484.1| DNA-binding transcriptional repressor SrlR [Escherichia coli
O157:H7 str. TW14359]
gi|261226001|ref|ZP_05940282.1| DNA-bindng transcriptional repressor [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256741|ref|ZP_05949274.1| DNA-bindng transcriptional repressor [Escherichia coli O157:H7 str.
FRIK966]
gi|291284034|ref|YP_003500852.1| Glucitol operon repressor [Escherichia coli O55:H7 str. CB9615]
gi|13363034|dbj|BAB36986.1| regulator for gut operon [Escherichia coli O157:H7 str. Sakai]
gi|187769544|gb|EDU33388.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4196]
gi|188015792|gb|EDU53914.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4113]
gi|189003487|gb|EDU72473.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4076]
gi|189357345|gb|EDU75764.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4401]
gi|189362018|gb|EDU80437.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4486]
gi|189366909|gb|EDU85325.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4501]
gi|189372134|gb|EDU90550.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC869]
gi|189377522|gb|EDU95938.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC508]
gi|208725690|gb|EDZ75291.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4206]
gi|208734377|gb|EDZ83064.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4045]
gi|208740302|gb|EDZ87984.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4042]
gi|209159884|gb|ACI37317.1| glucitol operon repressor [Escherichia coli O157:H7 str. EC4115]
gi|209762018|gb|ACI79321.1| regulator for gut operon [Escherichia coli]
gi|209762020|gb|ACI79322.1| regulator for gut operon [Escherichia coli]
gi|209762022|gb|ACI79323.1| regulator for gut operon [Escherichia coli]
gi|209762024|gb|ACI79324.1| regulator for gut operon [Escherichia coli]
gi|209762026|gb|ACI79325.1| regulator for gut operon [Escherichia coli]
gi|217319853|gb|EEC28278.1| glucitol operon repressor [Escherichia coli O157:H7 str. TW14588]
gi|254594047|gb|ACT73408.1| DNA-bindng transcriptional repressor [Escherichia coli O157:H7 str.
TW14359]
gi|290763907|gb|ADD57868.1| Glucitol operon repressor [Escherichia coli O55:H7 str. CB9615]
gi|320189039|gb|EFW63698.1| Glucitol operon repressor [Escherichia coli O157:H7 str. EC1212]
gi|320640350|gb|EFX09889.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O157:H7
str. G5101]
gi|320645897|gb|EFX14878.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O157:H-
str. 493-89]
gi|320651197|gb|EFX19632.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O157:H-
str. H 2687]
gi|320656747|gb|EFX24635.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320662290|gb|EFX29687.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O55:H7
str. USDA 5905]
gi|320667341|gb|EFX34299.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O157:H7
str. LSU-61]
gi|326339222|gb|EGD63037.1| Glucitol operon repressor [Escherichia coli O157:H7 str. 1044]
gi|326342895|gb|EGD66663.1| Glucitol operon repressor [Escherichia coli O157:H7 str. 1125]
Length = 257
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVGFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|26249102|ref|NP_755142.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli CFT073]
gi|91212066|ref|YP_542052.1| DNA-binding transcriptional repressor SrlR [Escherichia coli UTI89]
gi|110642827|ref|YP_670557.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli 536]
gi|117624938|ref|YP_853926.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli APEC
O1]
gi|191171351|ref|ZP_03032900.1| glucitol operon repressor [Escherichia coli F11]
gi|218559695|ref|YP_002392608.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli S88]
gi|218690829|ref|YP_002399041.1| DNA-binding transcriptional repressor SrlR [Escherichia coli ED1a]
gi|227888243|ref|ZP_04006048.1| DNA-binding transcriptional repressor SrlR [Escherichia coli 83972]
gi|237706673|ref|ZP_04537154.1| glucitol operon repressor [Escherichia sp. 3_2_53FAA]
gi|293415956|ref|ZP_06658596.1| DeoR family transcriptional regulator [Escherichia coli B185]
gi|300975096|ref|ZP_07172863.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|300976915|ref|ZP_07173667.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|301049544|ref|ZP_07196499.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|306812415|ref|ZP_07446613.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli NC101]
gi|331648425|ref|ZP_08349513.1| glucitol operon repressor [Escherichia coli M605]
gi|331658812|ref|ZP_08359754.1| glucitol operon repressor [Escherichia coli TA206]
gi|331684319|ref|ZP_08384911.1| glucitol operon repressor [Escherichia coli H299]
gi|26109509|gb|AAN81712.1|AE016765_114 Glucitol operon repressor [Escherichia coli CFT073]
gi|91073640|gb|ABE08521.1| glucitol operon repressor [Escherichia coli UTI89]
gi|110344419|gb|ABG70656.1| galactitol utilization operon repressor [Escherichia coli 536]
gi|115514062|gb|ABJ02137.1| DNA-bindng transcriptional repressor [Escherichia coli APEC O1]
gi|190908285|gb|EDV67875.1| glucitol operon repressor [Escherichia coli F11]
gi|218366464|emb|CAR04216.1| DNA-bindng transcriptional repressor [Escherichia coli S88]
gi|218428393|emb|CAR09319.2| DNA-bindng transcriptional repressor [Escherichia coli ED1a]
gi|222034400|emb|CAP77142.1| glucitol operon repressor [Escherichia coli LF82]
gi|226899713|gb|EEH85972.1| glucitol operon repressor [Escherichia sp. 3_2_53FAA]
gi|227834512|gb|EEJ44978.1| DNA-binding transcriptional repressor SrlR [Escherichia coli 83972]
gi|281179711|dbj|BAI56041.1| glucitol operon repressor [Escherichia coli SE15]
gi|291432145|gb|EFF05127.1| DeoR family transcriptional regulator [Escherichia coli B185]
gi|294490599|gb|ADE89355.1| glucitol operon repressor [Escherichia coli IHE3034]
gi|300298669|gb|EFJ55054.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|300308777|gb|EFJ63297.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|300409929|gb|EFJ93467.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|305854453|gb|EFM54891.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli NC101]
gi|307554681|gb|ADN47456.1| regulator for gut (srl) [Escherichia coli ABU 83972]
gi|307625724|gb|ADN70028.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli UM146]
gi|312947235|gb|ADR28062.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O83:H1
str. NRG 857C]
gi|315289205|gb|EFU48603.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 110-3]
gi|315293665|gb|EFU53017.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 153-1]
gi|315298707|gb|EFU57961.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 16-3]
gi|323188881|gb|EFZ74166.1| glucitol operon repressor [Escherichia coli RN587/1]
gi|323951075|gb|EGB46951.1| deoR family protein regulatory protein [Escherichia coli H252]
gi|323957083|gb|EGB52808.1| deoR family protein regulatory protein [Escherichia coli H263]
gi|324005748|gb|EGB74967.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 57-2]
gi|324013713|gb|EGB82932.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 60-1]
gi|330908738|gb|EGH37252.1| glucitol operon repressor [Escherichia coli AA86]
gi|331042172|gb|EGI14314.1| glucitol operon repressor [Escherichia coli M605]
gi|331053394|gb|EGI25423.1| glucitol operon repressor [Escherichia coli TA206]
gi|331077934|gb|EGI49140.1| glucitol operon repressor [Escherichia coli H299]
Length = 257
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVGFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|302185820|ref|ZP_07262493.1| regulatory protein, DeoR [Pseudomonas syringae pv. syringae 642]
Length = 255
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D + L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|331654184|ref|ZP_08355184.1| glucitol operon repressor [Escherichia coli M718]
gi|331047566|gb|EGI19643.1| glucitol operon repressor [Escherichia coli M718]
Length = 257
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEAAVGFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|330952355|gb|EGH52615.1| regulatory protein, DeoR [Pseudomonas syringae Cit 7]
Length = 255
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D I L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLIRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|222033750|emb|CAP76491.1| DEOR-type transcriptional regulator [Escherichia coli LF82]
Length = 236
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 21/136 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR+A+ ++ ++ +GTGST E LL + +GF++ + +
Sbjct: 64 KKAIARKALDFIPPNSSMIIGTGSTTFELANLLC--MKSGFKIFTDSLPVASVLIESDNQ 121
Query: 67 ------------------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ D+ VDL G D + ++ I
Sbjct: 122 VFLFGGELRRKSSSVFGGWAVSMINDI-HVDLCFIGTDGFSNMTGPSTPSSSDAFLDRTI 180
Query: 109 AHAASRFIVIGDESKR 124
+ + ++GD +K
Sbjct: 181 ISHSDKKYILGDYTKF 196
>gi|225620873|ref|YP_002722131.1| transcriptional regulator [Brachyspira hyodysenteriae WA1]
gi|225215693|gb|ACN84427.1| transcriptional regulator [Brachyspira hyodysenteriae WA1]
Length = 258
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
+ K+ A++A++ + DG T+ + +G+T + LA + + + +I +
Sbjct: 84 EAKKIIAKKALELIDDGDTIILDSGTT----IHELAKLMHSKKDLTIITND 130
>gi|330880291|gb|EGH14440.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 255
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
K+ AR A+ + + + + +GST + L + + N V +
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPGLVVMTNSLHVARALTDLEHEPV 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D I L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDVIRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|300718903|ref|YP_003743706.1| transcriptional regulator, DeoR family [Erwinia billingiae Eb661]
gi|299064739|emb|CAX61859.1| Transcriptional regulator, DeoR family [Erwinia billingiae Eb661]
Length = 255
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 25/155 (16%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+A K A+ A V DG +L + GST LA + + + V+ + T
Sbjct: 75 MNA-AAKTAIAQYAASLVKDGQSLILDNGSTVY----ALALALKDKKNLTVVTNDIFTAM 129
Query: 61 ---------------FCKIHHIPLHSPEDVSSVD-LSIDGFDEIDSRLRLIKGYGGALLR 104
L E V ++ + +D + G
Sbjct: 130 ALGNFPGITVHVAGGLMLDQVYTLVGQETVDKINSIHVDWAFLGSEGVHFDSGITNINTV 189
Query: 105 E----KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
E + + +A + +V+ D SK + P+
Sbjct: 190 EIPVKQAMIKSAEQTVVLVDSSKIGYRALAHVCPL 224
>gi|257485619|ref|ZP_05639660.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|330986999|gb|EGH85102.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011908|gb|EGH91964.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 255
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALAELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D I L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLIRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|146318699|ref|YP_001198411.1| sugar metabolism transcriptional regulator [Streptococcus suis
05ZYH33]
gi|146320907|ref|YP_001200618.1| sugar metabolism transcriptional regulator [Streptococcus suis
98HAH33]
gi|253751810|ref|YP_003024951.1| lactose phosphotransferase system repressor [Streptococcus suis
SC84]
gi|253753633|ref|YP_003026774.1| lactose phosphotransferase system repressor [Streptococcus suis
P1/7]
gi|253755486|ref|YP_003028626.1| lactose phosphotransferase system repressor 1 [Streptococcus suis
BM407]
gi|145689505|gb|ABP90011.1| Transcriptional regulator of sugar metabolism [Streptococcus suis
05ZYH33]
gi|145691713|gb|ABP92218.1| Transcriptional regulator of sugar metabolism [Streptococcus suis
98HAH33]
gi|251816099|emb|CAZ51721.1| lactose phosphotransferase system repressor [Streptococcus suis
SC84]
gi|251817950|emb|CAZ55729.1| lactose phosphotransferase system repressor 1 [Streptococcus suis
BM407]
gi|251819879|emb|CAR45906.1| lactose phosphotransferase system repressor [Streptococcus suis
P1/7]
gi|292558380|gb|ADE31381.1| regulatory protein, DeoR [Streptococcus suis GZ1]
gi|319758160|gb|ADV70102.1| sugar metabolism transcriptional regulator [Streptococcus suis
JS14]
Length = 255
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
+ K+ A RA Q + DG T+ +G G+T +
Sbjct: 78 EAKQEIAERAAQLIEDGDTVFLGPGTTVAFLAEAIK 113
>gi|170019674|ref|YP_001724628.1| DeoR family transcriptional regulator [Escherichia coli ATCC 8739]
gi|331658053|ref|ZP_08359015.1| transcriptional regulator, DeoR family [Escherichia coli TA206]
gi|169754602|gb|ACA77301.1| transcriptional regulator, DeoR family [Escherichia coli ATCC 8739]
gi|312946605|gb|ADR27432.1| DeoR family transcriptional regulator [Escherichia coli O83:H1 str.
NRG 857C]
gi|320193263|gb|EFW67901.1| Transcriptional regulator, DeoR family [Escherichia coli WV_060327]
gi|324008917|gb|EGB78136.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 57-2]
gi|331056301|gb|EGI28310.1| transcriptional regulator, DeoR family [Escherichia coli TA206]
Length = 251
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 21/136 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR+A+ ++ ++ +GTGST E LL + +GF++ + +
Sbjct: 79 KKAIARKALDFIPPNSSMIIGTGSTTFELANLLC--MKSGFKIFTDSLPVASVLIESDNQ 136
Query: 67 ------------------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ D+ VDL G D + ++ I
Sbjct: 137 VFLFGGELRRKSSSVFGGWAVSMINDI-HVDLCFIGTDGFSNMTGPSTPSSSDAFLDRTI 195
Query: 109 AHAASRFIVIGDESKR 124
+ + ++GD +K
Sbjct: 196 ISHSDKKYILGDYTKF 211
>gi|313665492|ref|YP_004047363.1| transcriptional regulator, DeoR family [Mycoplasma leachii PG50]
gi|312949439|gb|ADR24035.1| transcriptional regulator, DeoR family [Mycoplasma leachii PG50]
Length = 244
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTENFC 62
K A++A +YV +G + + TG+T K+ + L +K + NG+ + + ++ E
Sbjct: 81 KDLIAQKASEYVSNGDLIFLDTGTTTKQMIKYLINKKIIVVTNGYSIALELVEQDIEVIL 140
Query: 63 KIHHIPLHSPEDVSSV------DLSID----GFDEIDSRLRLIKGYGGALLREKIIAHAA 112
I + + + + D G + + S+ AL++EK I +
Sbjct: 141 LGGSINPSTHSTIGELALKNLDNFYFDKVFIGMNNLSSQHFYTTNIKEALIKEKAI-KNS 199
Query: 113 SRFIVIGDESKR 124
+ ++ D SK
Sbjct: 200 DKSFILMDSSKF 211
>gi|323529815|ref|YP_004231967.1| DeoR family transcriptional regulator [Burkholderia sp. CCGE1001]
gi|323386817|gb|ADX58907.1| transcriptional regulator, DeoR family [Burkholderia sp. CCGE1001]
Length = 251
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
KR RA ++V DG +L + +GST + L D+ R+ V +
Sbjct: 76 AKRAIGERAAEFVPDGASLIVDSGSTTQAVARALLDR----HRLSVYTNDWRIALLLGRR 131
Query: 66 HIP---------------LHSPEDVSSV-----DLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + V + D + G I L A
Sbjct: 132 NDNRVTLLGGELSDIEDATFGLDTVQQLTQYHADFAFIGAGGISPDGYLTDYSRMAAEVR 191
Query: 106 KIIAHAASRFIVIGDESKR 124
+ AA +++ D SK
Sbjct: 192 SRMIAAADTVVIVADHSKF 210
>gi|282865825|ref|ZP_06274875.1| transcriptional regulator, DeoR family [Streptomyces sp. ACTE]
gi|282559469|gb|EFB65021.1| transcriptional regulator, DeoR family [Streptomyces sp. ACTE]
Length = 265
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 31/148 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN----TENFC 62
K+ A A + V DG +G+ G+T E LA + G R V ++ T
Sbjct: 78 KQRIAAAAAELVGDGNVVGLNGGTTTTEVARSLALRAGGGRRGTVEATAPALTVVTNALN 137
Query: 63 KI--------------------------HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIK 96
+ ++V +D+++ G D +D +L ++
Sbjct: 138 IAGELAVRPQIKIVVTGGVARPQSYELVGPLTAGVLKEV-VLDVAVLGIDGLDPQLGVMA 196
Query: 97 GYGGALLREKIIAHAASRFIVIGDESKR 124
++ A A R +V+ D SK
Sbjct: 197 HQEDEASISRLFAERAQRVVVVTDSSKM 224
>gi|209522159|ref|ZP_03270803.1| transcriptional regulator, DeoR family [Burkholderia sp. H160]
gi|209497408|gb|EDZ97619.1| transcriptional regulator, DeoR family [Burkholderia sp. H160]
Length = 251
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
KR RA ++V DG +L + +GST + L D+ R+ V +
Sbjct: 76 AKRAIGERAAEFVPDGASLIIDSGSTTQAVARALLDR----HRLTVYTNDWRIALLLGRR 131
Query: 66 HIP---------------LHSPEDVSSV-----DLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + V + D + G I L A
Sbjct: 132 NDNRVTLLGGELSDIEDATFGLDTVQQLTQYHADFAFIGAGGISPDGYLTDYSRMAAEVR 191
Query: 106 KIIAHAASRFIVIGDESKR 124
+ AA +++ D SK
Sbjct: 192 SRMIAAADMVLIVADHSKF 210
>gi|91778233|ref|YP_553441.1| DeoR family transcriptional regulator [Burkholderia xenovorans
LB400]
gi|91690893|gb|ABE34091.1| transcriptional regulator, DeoR family [Burkholderia xenovorans
LB400]
Length = 251
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
KR RA ++V DG +L + +GST + L D+ R+ V +
Sbjct: 76 AKRAIGERAAEFVPDGASLIIDSGSTTQAVARALLDR----HRLAVYTNDWRIALLLGRR 131
Query: 66 HIP---------------LHSPEDVSSV-----DLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + V + D + G I L A
Sbjct: 132 NDNRVTLLGGELSDIEDATFGLDTVHQLTQYHADFAFIGAGGISPDGYLTDYSRMAAEVR 191
Query: 106 KIIAHAASRFIVIGDESKR 124
+ AA +++ D SK
Sbjct: 192 SRMIAAADMVVIVADHSKF 210
>gi|148997096|ref|ZP_01824750.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP11-BS70]
gi|147756796|gb|EDK63836.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae SP11-BS70]
Length = 35
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 203 GVIEHGLFINMVDCAIIGTSDGECLVLQK 231
GV+EHGLF MVD I+ DG + K
Sbjct: 4 GVVEHGLFNQMVDKVIVAGRDGVQISTSK 32
>gi|42561355|ref|NP_975806.1| transcription repressor of fructose operon [Mycoplasma mycoides
subsp. mycoides SC str. PG1]
gi|42492853|emb|CAE77448.1| transcription repressor of fructose operon [Mycoplasma mycoides
subsp. mycoides SC str. PG1]
gi|301320910|gb|ADK69553.1| transcriptional regulator, DeoR family [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 232
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCK 63
Q K+ A +A++ + + + +GST LA + ++++ S N + K
Sbjct: 78 QAKQQIAIKALKKIKPRTCIFLDSGSTTYY----LAKILDANLDLKIVTNSILNVQELSK 133
Query: 64 IHHIPLHSP--------------EDVSSVDLS-----IDGFDEIDSRLRLIKGYGGALLR 104
+H ++ + V+ + G + +D + +
Sbjct: 134 NNHQNIYLLGGKYQVVTSSILGYQAVNDLKNYAFDLSFIGINAVDDQTNIYTTSDDHAQL 193
Query: 105 EKIIAHAASRFIVIGDESKRVD 126
+ + +++ + D+SK+
Sbjct: 194 KIQVIKNSNKSYGLVDQSKKHS 215
>gi|331703620|ref|YP_004400307.1| transcriptional repressor of the fructoseoperon [Mycoplasma
mycoides subsp. capri LC str. 95010]
gi|328802175|emb|CBW54329.1| Transcriptional repressor of the fructoseoperon [Mycoplasma
mycoides subsp. capri LC str. 95010]
Length = 244
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTENFC 62
K A++A ++V DG + + TG+T K+ + L +K + NG+ + + ++ E
Sbjct: 81 KNLIAKKASEFVSDGDLIFLDTGTTTKQMIKYLINKKIIVVTNGYSIALELVEQDIEVIL 140
Query: 63 KIHHIPLHSPEDVSSV------DLSID----GFDEIDSRLRLIKGYGGALLREKIIAHAA 112
I + + + + D G + + S+ AL++EK I +
Sbjct: 141 LGGSINPSTHATIGELALKNLDNFYFDKVFIGMNNLSSQHFYTTNIKEALIKEKAI-KNS 199
Query: 113 SRFIVIGDESKR 124
+ ++ D SK
Sbjct: 200 DKSFILMDSSKF 211
>gi|291532594|emb|CBL05707.1| Transcriptional regulators of sugar metabolism [Megamonas
hypermegale ART12/1]
Length = 251
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A V D + + +G+T + LA+K
Sbjct: 76 KKKQLAKLAANLVDDNDIIYIDSGTTTMHMIPYLAEK 112
>gi|320459097|dbj|BAJ69718.1| transcriptional regulator [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 237
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K A+ AIQYV G + +G G+TA F L +
Sbjct: 48 LKGAIAQEAIQYVAPGDVIAIGGGTTAYVFAQHLLE 83
>gi|257463518|ref|ZP_05627911.1| transcription-repair coupling factor [Fusobacterium sp. D12]
gi|317061074|ref|ZP_07925559.1| transcriptional repressor [Fusobacterium sp. D12]
gi|313686750|gb|EFS23585.1| transcriptional repressor [Fusobacterium sp. D12]
Length = 233
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 18/136 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----------NGFRVQVIP 53
Q K+ A+ A +Y+ DG + + GST + + L +K + + IP
Sbjct: 77 QEKQKIAKLASKYLEDGQKIYLDAGSTVEALIPYLEEKKNIEIVTNGYSHLSHLLGKGIP 136
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ K L V S+ ++ G + ++ + A+++E +
Sbjct: 137 TYLIAGR-VKEKTQSLVGARAVLSLRDFYFDIAFLGANSMNEETFMTPDPEEAIVKE-AV 194
Query: 109 AHAASRFIVIGDESKR 124
A++ ++ D SK
Sbjct: 195 VRRANKSYILADSSKW 210
>gi|223932313|ref|ZP_03624316.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
gi|302023833|ref|ZP_07249044.1| lactose phosphotransferase system repressor [Streptococcus suis
05HAS68]
gi|330832867|ref|YP_004401692.1| lactose phosphotransferase system repressor 1 [Streptococcus suis
ST3]
gi|223898994|gb|EEF65352.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
gi|329307090|gb|AEB81506.1| lactose phosphotransferase system repressor 1 [Streptococcus suis
ST3]
Length = 255
Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
+ K+ A RA Q + DG T+ +G G+T +
Sbjct: 78 EAKQEIAERAAQLIEDGDTVFLGPGTTVAFLAEAIK 113
>gi|309774974|ref|ZP_07669992.1| transcriptional regulator of sugar metabolism [Erysipelotrichaceae
bacterium 3_1_53]
gi|308917300|gb|EFP63022.1| transcriptional regulator of sugar metabolism [Erysipelotrichaceae
bacterium 3_1_53]
Length = 259
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
K+ AR+A+ ++ D + + GST L ++ G V + +
Sbjct: 80 KQLIARKALDFIHDNTVIFLDPGSTILYLAKYL--RLRKGLTVVTNSLAIASM 130
>gi|15803224|ref|NP_289256.1| DNA-bindng transcriptional repressor SrlR [Escherichia coli O157:H7
EDL933]
gi|12517152|gb|AAG57814.1|AE005499_1 regulator for gut (srl), glucitol operon [Escherichia coli O157:H7
str. EDL933]
Length = 229
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A+ ++ DG ++ + GST + L++
Sbjct: 49 KKELIAEAAVGFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 108
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 109 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 164
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 165 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 195
>gi|296104381|ref|YP_003614527.1| DNA-bindng transcriptional repressor SrlR [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295058840|gb|ADF63578.1| DNA-bindng transcriptional repressor SrlR [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 257
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 46/150 (30%), Gaps = 24/150 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG- 46
K A A++++ DG ++ + GST + LA+ +
Sbjct: 78 KALIAEAAVKFIHDGDSIILDAGSTVLQMIPLLNRFNNITVMTNSLHIVNALAEFDSEQT 137
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + + +F + + DG D + + K
Sbjct: 138 ILMPGGTFRKKSASFHGQLAENAFEHFSFDKLFMGTDGIDL----NAGVTTFNEVFSVSK 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ +AA I++ D SK + +E
Sbjct: 194 AMCNAAREVILMADSSKFGRKSPNIVCSLE 223
>gi|161502117|ref|YP_001569229.1| DNA-binding transcriptional repressor SrlR [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160863464|gb|ABX20087.1| hypothetical protein SARI_00134 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 257
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------ 54
K A A++Y+ DG ++ + GST + + LL+ + N + S
Sbjct: 77 KKALIAATAVKYIHDGDSIILDAGSTVLQMVPLLSRFSNITVMTNSLHIVNSLSELDNEQ 136
Query: 55 ---------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|330964201|gb|EGH64461.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 255
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
K+ AR A+ + + + + +GST + L + + N V +
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPGLVVMTNSLHVARALTDLEHEPV 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D I L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLIRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|322410976|gb|EFY01884.1| putative transcriptional regulator [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 248
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 43/144 (29%), Gaps = 17/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRRIAEKAAELVQDNDTVMIESGSTCALLAEVLCQTKRNIKIITNSCFIANYIRQYNSCQ 131
Query: 67 I--PLHSPEDVSSVDLSIDGFDE-----IDSRLRLIKGYGGAL-LREK---------IIA 109
I + S V + + ++ I G+ L K +A
Sbjct: 132 IILLGGYYQPNSEVTVGPLLKEMVSLFHVNHVFVGIDGFNSNLGFMGKDMMRSEGVRYMA 191
Query: 110 HAASRFIVIGDESKRVDFLGRGML 133
A +V+ D SK L
Sbjct: 192 EIAEEVVVLTDSSKFTKNSLVHHL 215
>gi|315187048|gb|EFU20805.1| transcriptional regulator, DeoR family [Spirochaeta thermophila DSM
6578]
Length = 252
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 22/151 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI---------PSS 55
+ K AR A +V DGM + + G+T + L K PS
Sbjct: 76 EEKHRIARAASSFVEDGMVVMIEAGTTTALIVRYLVGKRDVHIVTNSTLVFSYARLNPSL 135
Query: 56 RNT-----ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE----- 105
R T + + + + + + + ++ L E
Sbjct: 136 RITVVGGEFRRETESMVGPIALSTIQRLHV---PLAFVGTDGFSLERGMTTHLFEGAEIV 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + + + I++ D SK +LP+E
Sbjct: 193 KAMRQHSVKTILVADSSKYGKVGFVHVLPLE 223
>gi|28872695|ref|NP_795314.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213968462|ref|ZP_03396605.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
tomato T1]
gi|301384251|ref|ZP_07232669.1| transcriptional regulator, DeoR family protein [Pseudomonas
syringae pv. tomato Max13]
gi|302063898|ref|ZP_07255439.1| transcriptional regulator, DeoR family protein [Pseudomonas
syringae pv. tomato K40]
gi|302131982|ref|ZP_07257972.1| transcriptional regulator, DeoR family protein [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|28855951|gb|AAO59009.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213926750|gb|EEB60302.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
tomato T1]
Length = 255
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
K+ AR A+ + + + + +GST + L + + N V +
Sbjct: 78 KKAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPGLVVMTNSLHVARALTDLEHEPV 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D I L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLIRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|52081860|ref|YP_080651.1| transcriptional regulator YulB [Bacillus licheniformis ATCC 14580]
gi|52787247|ref|YP_093076.1| YulB [Bacillus licheniformis ATCC 14580]
gi|319647778|ref|ZP_08001996.1| YulB protein [Bacillus sp. BT1B_CT2]
gi|52005071|gb|AAU25013.1| probable transcriptional regulator YulB [Bacillus licheniformis
ATCC 14580]
gi|52349749|gb|AAU42383.1| YulB [Bacillus licheniformis ATCC 14580]
gi|317390119|gb|EFV70928.1| YulB protein [Bacillus sp. BT1B_CT2]
Length = 253
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 16/138 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANGF 47
+ + K+ A A+++V G + + +TA L A +++
Sbjct: 75 NVNE-KKMIAFEAVKHVKSGERIILDASTTAWYMAKALENIPLTVITNSVRVAIELSKKE 133
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPE-DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+V VI + + PL D+ V+ + +D L L +K
Sbjct: 134 KVTVISTGGMLLPQSMSYVGPLAERSLDMYHVNKTFLSCKGVDPASGLSDSNEMQALLKK 193
Query: 107 IIAHAASRFIVIGDESKR 124
+ A I++ D SK
Sbjct: 194 RMIEIADETILMADSSKF 211
>gi|331017747|gb|EGH97803.1| transcriptional regulator, DeoR family protein [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 255
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
K+ AR A+ + + + + +GST + L + + N V +
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPGLVVMTNSLHVARALTDLEHEPV 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D I L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLIRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|56962432|ref|YP_174158.1| transcriptional regulator of sugar metabolism [Bacillus clausii
KSM-K16]
gi|56908670|dbj|BAD63197.1| transcriptional regulator of sugar metabolism [Bacillus clausii
KSM-K16]
Length = 251
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 15/134 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRVQ 50
K+ AR A Q V +G T+ + +G+T E + LL D+ +
Sbjct: 78 AKKAIAREAAQLVENGSTVLIDSGTTTLEIVKLLKDRNDLTIITNDIKIASQLIEAKPRC 137
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+I +H VDL + G + + + +K++
Sbjct: 138 IITGGEVQPELGALHGPHAQELLRNIHVDLFLLGAHAVHASAGITAPTLEKAKIKKLMMQ 197
Query: 111 AASRFIVIGDESKR 124
AA++ ++ D K
Sbjct: 198 AAAKTWLVCDSKKF 211
>gi|149192116|ref|ZP_01870339.1| DNA-bindng transcriptional repressor [Vibrio shilonii AK1]
gi|148834059|gb|EDL51073.1| DNA-bindng transcriptional repressor [Vibrio shilonii AK1]
Length = 262
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 25/158 (15%)
Query: 1 MDALQ-----MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
MD Q +K A++A + + DG ++ + GST + + L DK+A +
Sbjct: 77 MDEKQTLNLDLKSAIAKKACELIRDGDSIILDCGSTTLQMVPHLEDKLALTLMTNSMHIV 136
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSID------------------GFDEIDSRLRLIKG 97
+ H + + + S G D D I
Sbjct: 137 NAMAQLEREHTV-IIPGGTYRRISASFHGKLAEQAFSQFTFDKLFIGADGFDLNSGTI-T 194
Query: 98 YGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
Y A + + AA+ IV+ D +K ++P+
Sbjct: 195 YNEAYQVSQAMYEAANEVIVVLDSNKFGRRSPNVVVPL 232
>gi|104784431|ref|YP_610929.1| DeoR family transcriptional regulator [Pseudomonas entomophila L48]
gi|95113418|emb|CAK18146.1| putative transcriptional repressor, DeoR family [Pseudomonas
entomophila L48]
Length = 258
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 18/145 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + + +R
Sbjct: 78 KKAIARAAVGRIREHARIIIDSGSTTAAMIPELGRQPGLVVMTNSLNVARAISELEHEPV 137
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + + G D ID + L +++A
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLNRGTT-TFNELLGLSRVMA 196
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
A IV+ + K + LP
Sbjct: 197 EVAREVIVMVESDKVGRKIPNLELP 221
>gi|323693814|ref|ZP_08108006.1| hypothetical protein HMPREF9475_02869 [Clostridium symbiosum
WAL-14673]
gi|323502117|gb|EGB17987.1| hypothetical protein HMPREF9475_02869 [Clostridium symbiosum
WAL-14673]
Length = 259
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 24/150 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS---RNTENFCK 63
K AR A++ + DG ++ + +G+T L ++ ++ V+ ++ +T
Sbjct: 85 KTRIAREAVKLIKDGDSIFLDSGTTTLL----LGQQLEGIKKLTVVTNNLDIASTVKLDN 140
Query: 64 IHHIPLHSPEDVS-----------------SVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + VD++ G D ++S+ + + +K
Sbjct: 141 SSTMIVTGGVRRDGYSVLIGDIAEELVRKLYVDIAFVGADAVNSKSGVYNSNFMEIGIKK 200
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + R +++ D SK + IE
Sbjct: 201 SMIASGKRTVLLADHSKFKQKALAKICDIE 230
>gi|238795203|ref|ZP_04638789.1| aga operon transcriptional repressor [Yersinia intermedia ATCC
29909]
gi|238725457|gb|EEQ17025.1| aga operon transcriptional repressor [Yersinia intermedia ATCC
29909]
Length = 269
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+KR+ AR A + G + + +G+T +A + N V + + N N
Sbjct: 92 LKRDIARVAANLIKPGHRVILDSGTTTN----EIARHMRNHKEVIAMTNGMNVANALLEA 147
Query: 66 HIPLHSPE----DVSSVDLSIDGFDEIDSRLRL---IKGYGGALLRE------------- 105
S+ D D+ G L
Sbjct: 148 EGVELLMTGGHLRRQSLSFYGDQADQSLQNYHFDILFLGVDAISLERGVSTHNEDEARLN 207
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A R IV+ D SK
Sbjct: 208 RRMCEVAERIIVVTDSSKF 226
>gi|332523541|ref|ZP_08399793.1| transcriptional regulator, DeoR family [Streptococcus porcinus str.
Jelinkova 176]
gi|332314805|gb|EGJ27790.1| transcriptional regulator, DeoR family [Streptococcus porcinus str.
Jelinkova 176]
Length = 247
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRKIAEKAAELVQDNDTIMIESGSTCALLAEVLCQTKRNIKIITNSCFIANFLRQYDSCQ 131
Query: 67 I-----PLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I +V+ VD G D ++ + + +A
Sbjct: 132 IILLGGNYQPNSEVTVGPLLKQMVDLFHVDRVFAGTDGFSPKIGFMCKDMMRCESVQYMA 191
Query: 110 HAASRFIVIGDESKR 124
AA I++ D SK
Sbjct: 192 DAAEETIILTDSSKF 206
>gi|237729661|ref|ZP_04560142.1| DNA-bindng transcriptional repressor SrlR [Citrobacter sp. 30_2]
gi|226908267|gb|EEH94185.1| DNA-bindng transcriptional repressor SrlR [Citrobacter sp. 30_2]
Length = 257
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 45/151 (29%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A++++ DG ++ + GST + L++
Sbjct: 77 KKEQIAEAAVRFIHDGDSIILDAGSTVLQMVPMLTRFSNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDL----NAGVTTFNEVFSVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|168334369|ref|ZP_02692553.1| DeoR-family transcriptional regulator [Epulopiscium sp. 'N.t.
morphotype B']
Length = 255
Score = 43.7 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K AR A + G + + +GST + + L +K
Sbjct: 79 EAKLAIARVAADLIQPGDVIALNSGSTMECILHYLEEK 116
>gi|310827440|ref|YP_003959797.1| glucitol operon repressor [Eubacterium limosum KIST612]
gi|308739174|gb|ADO36834.1| glucitol operon repressor [Eubacterium limosum KIST612]
Length = 284
Score = 43.7 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 16/134 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI-- 64
K+ A A + + DG L +G GST E L S T K+
Sbjct: 82 KKAIAAEACRLINDGDVLALGGGSTVAEMAPWLLKLKEAVILTDSTVMSTLTIPNQKLEV 141
Query: 65 -------HHIPLHSPEDVSSVDLSIDGFDEI-----DSRLRLIKGYGGALL--REKIIAH 110
S + D+ + G L+ EK++
Sbjct: 142 HINSGIVRGRTGCVVGPTSDILFQSYSADKAFIGCDAFDIEFGAGSDNILVGKVEKVMLK 201
Query: 111 AASRFIVIGDESKR 124
A ++ D +K
Sbjct: 202 CARERYILCDSTKL 215
>gi|295100074|emb|CBK89163.1| Transcriptional regulators of sugar metabolism [Eubacterium
cylindroides T2-87]
Length = 250
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 17/136 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A++A+ V G T+ + +GST +L D+ N F + +
Sbjct: 77 EEKKIIAQKALDLVKPGHTIFIDSGSTTTMLSHILKDQP-NTFVTSGLTCAIEMAKLKSA 135
Query: 65 HHIPLHSPEDVSSVDL----------------SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ S+ + + G + +K
Sbjct: 136 KVSLTGGNLNNRSLSVNGFEGLRLIERVNFDEAFIGVTNFSYKTGFTCESESDAELKKAA 195
Query: 109 AHAASRFIVIGDESKR 124
A++ I++ D SK
Sbjct: 196 IQKANKVIILMDSSKY 211
>gi|223986714|ref|ZP_03636701.1| hypothetical protein HOLDEFILI_04024 [Holdemania filiformis DSM
12042]
gi|223961314|gb|EEF65839.1| hypothetical protein HOLDEFILI_04024 [Holdemania filiformis DSM
12042]
Length = 251
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K A V + + + +GSTA + LADK
Sbjct: 79 EEKIKIGELAASLVENNDIIFIDSGSTAHYIVDFLADK 116
>gi|170724353|ref|YP_001752041.1| DeoR family transcriptional regulator [Pseudomonas putida W619]
gi|169762356|gb|ACA75672.1| transcriptional regulator, DeoR family [Pseudomonas putida W619]
Length = 258
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 18/145 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + + +R
Sbjct: 78 KKAIARAAVGRIREHARIIIDSGSTTAAMIPELGRQPGLVVMTNSLNVARAISELEHEPV 137
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + + G D ID + L +++A
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLNRGTT-TFNELLGLSRVMA 196
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
A IV+ + K + LP
Sbjct: 197 EVAREVIVMVESDKVGRKIPNLELP 221
>gi|307718513|ref|YP_003874045.1| transcriptional regulatory protein [Spirochaeta thermophila DSM
6192]
gi|306532238|gb|ADN01772.1| transcriptional regulatory protein [Spirochaeta thermophila DSM
6192]
Length = 252
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 22/151 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI---------PSS 55
+ K AR A +V DGM + + G+T + L K PS
Sbjct: 76 EEKHRIARAASSFVEDGMVVMIEAGTTTALIVRYLVGKRDVHIVTNSTLVFSYARLNPSL 135
Query: 56 RNT-----ENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE----- 105
R T + + + + + + + ++ L E
Sbjct: 136 RITVVGGEFRRETESMVGPIALSTIQRLHV---PLAFVGTDGFSLERGMTTHLFEGAEIV 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + + + I++ D SK +LP+E
Sbjct: 193 KTMRQHSVKTILVADSSKYGKVGFVHVLPLE 223
>gi|210630376|ref|ZP_03296424.1| hypothetical protein COLSTE_00308 [Collinsella stercoris DSM 13279]
gi|210160507|gb|EEA91478.1| hypothetical protein COLSTE_00308 [Collinsella stercoris DSM 13279]
Length = 268
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ AR AI+ V DG T+ + +G+TA EF+ +L +
Sbjct: 84 DAKQAIARAAIELVHDGDTVFVDSGTTALEFVRMLDRR 121
>gi|313902972|ref|ZP_07836367.1| transcriptional regulator, DeoR family [Thermaerobacter
subterraneus DSM 13965]
gi|313466696|gb|EFR62215.1| transcriptional regulator, DeoR family [Thermaerobacter
subterraneus DSM 13965]
Length = 258
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 43/139 (30%), Gaps = 18/139 (12%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------AN 45
++ KR R A + G T+ + GST E L +I
Sbjct: 76 QVEAKRKIGRAAAALIRPGETVILDAGSTTLEIARHLPPRITLKVVTNDLLIARELADRE 135
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
G V V + + VD + G D +D + + +
Sbjct: 136 GVDVYVTGGQVRRGVYSLQGPETEAYLR-ATHVDRAFVGADGVDVAYGVSTTNRQKVPVK 194
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + AA R V+ D SK
Sbjct: 195 QAMLAAAERSYVVADHSKL 213
>gi|66048342|ref|YP_238183.1| regulatory protein, DeoR [Pseudomonas syringae pv. syringae B728a]
gi|63259049|gb|AAY40145.1| regulatory protein, DeoR [Pseudomonas syringae pv. syringae B728a]
Length = 255
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
K+ AR A+ + + + + +GST + L + + N V + +
Sbjct: 78 KQAIARAAVCRIREHARIIVDSGSTTAALIPELGQQPGLVVMTNSLHVARVLTELEHEPV 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|291547479|emb|CBL20587.1| Transcriptional regulators of sugar metabolism [Ruminococcus sp.
SR1/5]
Length = 254
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN----------------GF 47
+ K RRA + V + T+ + TG+T + +ADK
Sbjct: 78 DEKKEIC-RRAAELVAEDDTIYIDTGTTCLNLVDFIADKHCTILTNSLLIFNKAASYPNL 136
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ +P N + + + + ++ + + L + +K
Sbjct: 137 DIISVPGKLNRKTLSFTGPDINDYLQTYN-ISMAFMACTGVTMKSGLTNASAEEYITKKA 195
Query: 108 IAHAASRFIVIGDESKR 124
IA A+ I++ D SK
Sbjct: 196 IAENANSMILLADHSKF 212
>gi|329115965|ref|ZP_08244682.1| transcriptional regulator, DeoR family [Streptococcus parauberis
NCFD 2020]
gi|326906370|gb|EGE53284.1| transcriptional regulator, DeoR family [Streptococcus parauberis
NCFD 2020]
Length = 247
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRKIAEKAAELVADNDTIMIESGSTCALLAEVLCQTKRNIKIITNSCFIANFLRQYDSCQ 131
Query: 67 I-----PLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I +V+ VD+ G D ++ + + +A
Sbjct: 132 IILLGGNYQHNSEVTVGPLLKQMINLFHVDMVFAGTDGFSPQVGFMCKDMMRCEAVQSMA 191
Query: 110 HAASRFIVIGDESKR 124
AA + I++ D SK
Sbjct: 192 DAAEKTIILTDSSKF 206
>gi|153809475|ref|ZP_01962143.1| hypothetical protein BACCAC_03793 [Bacteroides caccae ATCC 43185]
gi|149127856|gb|EDM19079.1| hypothetical protein BACCAC_03793 [Bacteroides caccae ATCC 43185]
Length = 54
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 166 RNGSGLFVSDGGNYIVDAFFGFIPDPQIISGELCNIPGVIEHGLFINMVDCAIIG 220
G +++ GN+I D F +I + ++ I G IE LFI I
Sbjct: 1 MAKDGPVLTENGNFIPDTRFHYID--SSLEEQVKAITGAIESELFIGYDVEIITA 53
>gi|322388147|ref|ZP_08061751.1| lactose PTS family porter repressor [Streptococcus infantis ATCC
700779]
gi|321140819|gb|EFX36320.1| lactose PTS family porter repressor [Streptococcus infantis ATCC
700779]
Length = 246
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 31/153 (20%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A+RA + + + + GST + L + V+ +S +
Sbjct: 77 QEKKLIAQRASSLIKEKDVIFVDAGSTTAFLIKEL-----ERKDITVVTNSIHHAVQLVD 131
Query: 65 HHIPL-----------------HSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGAL 102
IP + ++ + + ++G DE ++
Sbjct: 132 KQIPTVIIGGGVKMTTDASIGGVALNQINQLHFDRAFIGMNGVDEGYFTTPDMEEGAV-- 189
Query: 103 LREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ I A + V+ D SK + PI
Sbjct: 190 --KRAILENAKQTYVLADSSKLGQSCFAKVAPI 220
>gi|289578927|ref|YP_003477554.1| DeoR family transcriptional regulator [Thermoanaerobacter italicus
Ab9]
gi|289528640|gb|ADD02992.1| transcriptional regulator, DeoR family [Thermoanaerobacter italicus
Ab9]
Length = 251
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS--------- 55
+ K+ A +A++ V +G + + GST +A + N + V+ ++
Sbjct: 76 EEKQKIAAKALEEVKEGDVIFLDAGSTTYH----IARLLKNFKNITVVTNALNVATELAN 131
Query: 56 ------RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY--GGALLR--- 104
T K + + E V+ + + + ++ +
Sbjct: 132 NPNINLFITGGKLKTDNHSMVGFETVNCIGKYNIDILFLGTGGISLEKGLTTSDIFEAEA 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+K + +A R IV+ D SK
Sbjct: 192 KKAMIKSARRVIVVADSSKF 211
>gi|297545139|ref|YP_003677441.1| DeoR family transcriptional regulator [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842914|gb|ADH61430.1| transcriptional regulator, DeoR family [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 251
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS--------- 55
+ K+ A +A++ V +G + + GST +A + N + V+ ++
Sbjct: 76 EEKQKIAAKALEEVKEGDVIFLDAGSTTYH----IARLLKNFKNITVVTNALNVATELAN 131
Query: 56 ------RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY--GGALLR--- 104
T K + + E V+ + + + ++ +
Sbjct: 132 NPNINLFITGGKLKTDNHSMVGFETVNCIGKYNIDILFLGTGGISLEKGLTTSDIFEAEA 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+K + +A R IV+ D SK
Sbjct: 192 KKAMIKSARRVIVVADSSKF 211
>gi|295099362|emb|CBK88451.1| Transcriptional regulators of sugar metabolism [Eubacterium
cylindroides T2-87]
Length = 255
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 17/135 (12%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQ 50
K+ A++A++Y+ D + + GST L A +++
Sbjct: 79 AKQAIAKKALEYIKDNSMIFLDPGSTTLALAKYLPLKKGLTIVTNSLAIAQLVSDMKHDL 138
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEI-DSRLRLIKGYGGALLREKIIA 109
+ R + + D +D + G D ++ + L+++ +I
Sbjct: 139 IFTGGRLQKKGKAFVGAFTANNIDAIQIDTAFMGCDGFLNTDGPTTFSFEEVLIKQHVIK 198
Query: 110 HAASRFIVIGDESKR 124
A+ + I++ D SK
Sbjct: 199 KASQK-ILLCDASKF 212
>gi|239625234|ref|ZP_04668265.1| transcriptional regulator [Clostridiales bacterium 1_7_47_FAA]
gi|239519464|gb|EEQ59330.1| transcriptional regulator [Clostridiales bacterium 1_7_47FAA]
Length = 262
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ AR A++ + DG + + TG+T E + LL +K
Sbjct: 88 KKAIARAALELIDDGDIIAVTTGTTTFELVKLLPEK 123
>gi|237808625|ref|YP_002893065.1| DNA-binding transcriptional repressor SrlR [Tolumonas auensis DSM
9187]
gi|237500886|gb|ACQ93479.1| transcriptional regulator, DeoR family [Tolumonas auensis DSM 9187]
Length = 254
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 24/152 (15%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNT 58
+K+ +A V DG ++ + GST + + L +++A N + +R++
Sbjct: 77 QNIKQRIGAKAASLVHDGESIILDNGSTTLQMVPWLVERVALTVMTNSLHIINEVVARDS 136
Query: 59 ENFCKIHHIPLHSPE---------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
+ + + DGFD I A
Sbjct: 137 NMNLLMPGGTYRKRSASFHGGLAEQAFRAFSFDKLFIGADGFDIEQGTTTFI----EAYQ 192
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ + AA + IV+ D SK ++PI
Sbjct: 193 VSQAMCQAAKQIIVVTDSSKFGRKTPNVVVPI 224
>gi|297563821|ref|YP_003682794.1| transcriptional regulator, DeoR family [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848270|gb|ADH70288.1| transcriptional regulator, DeoR family [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 289
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 26/192 (13%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI----P 53
K AR + V +G+ G+T L D + N RV +
Sbjct: 100 QEDEKHAIARAVAELVEPHSAVGLSAGTTTATVAEYLTDTPGLTVVTNSLRVAEVFHRAA 159
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDLSI---DGFDEIDSRLRLIKGYGGALLR------ 104
T P + V + L+ D + + ++ G
Sbjct: 160 RPDQTVALTGGFRTPSDAL--VGPLALASVRGLNLDVLVLGVHGMQERAGFTTPNLMESE 217
Query: 105 -EKIIAHAASRFIVIGDESKRVDFLGRGMLP-----IEIDQFGVNKTLSALKEVASCFGL 158
+ + AA+ +V D SK + P + + G + + A +
Sbjct: 218 TNRALVEAAASLVVAADHSKWGTVGISTIAPLDRCDVLVTDSGTDPAVRAALTEHVGRLV 277
Query: 159 NEELRLRRNGSG 170
++R R+ G
Sbjct: 278 VADVRPRKREDG 289
>gi|91212551|ref|YP_542537.1| DNA-binding transcriptional regulator AgaR [Escherichia coli UTI89]
gi|117625429|ref|YP_858752.1| DNA-binding transcriptional regulator AgaR [Escherichia coli APEC
O1]
gi|218560205|ref|YP_002393118.1| DNA-binding transcriptional regulator AgaR [Escherichia coli S88]
gi|237706114|ref|ZP_04536595.1| DNA-binding transcriptional regulator AgaR [Escherichia sp.
3_2_53FAA]
gi|91074125|gb|ABE09006.1| putative DEOR-type transcriptional regulator of aga operon
[Escherichia coli UTI89]
gi|115514553|gb|ABJ02628.1| DNA-binding transcriptional dual regulator [Escherichia coli APEC
O1]
gi|218366974|emb|CAR04745.1| DNA-binding transcriptional dual regulator [Escherichia coli S88]
gi|226899154|gb|EEH85413.1| DNA-binding transcriptional regulator AgaR [Escherichia sp.
3_2_53FAA]
gi|294490324|gb|ADE89080.1| galactitol utilization operon repressor [Escherichia coli IHE3034]
gi|307625266|gb|ADN69570.1| DNA-binding transcriptional regulator AgaR [Escherichia coli UM146]
gi|315288904|gb|EFU48302.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 110-3]
gi|323951347|gb|EGB47222.1| deoR family protein regulatory protein [Escherichia coli H252]
gi|323957718|gb|EGB53432.1| deoR family protein regulatory protein [Escherichia coli H263]
Length = 274
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|300947436|ref|ZP_07161625.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|300452957|gb|EFK16577.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
Length = 274
Score = 43.3 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|239617129|ref|YP_002940451.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
gi|239505960|gb|ACR79447.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
Length = 254
Score = 43.3 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 42/142 (29%), Gaps = 23/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC-- 62
+KR AR AI +V +GM +G ST + L I G + ++ +S
Sbjct: 77 DLKRKIAREAINFVKEGMVVGFDA-STTALQIAKLV--IEKGINITLVTTSLPIFRLVTY 133
Query: 63 --------KIHHIPLHSPEDVSSVDL----------SIDGFDEIDSRLRLIKGYGGALLR 104
+ + V + + G I
Sbjct: 134 SNRANVILIGGEYDMKNLSFVGPITIRNLDMFCFNLCFIGASTIIPERGFFTPDSRGAEV 193
Query: 105 EKIIAHAASRFIVIGDESKRVD 126
+ A +S+ I + D SK
Sbjct: 194 IRHFALNSSKVIGVTDSSKFKK 215
>gi|289628234|ref|ZP_06461188.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649124|ref|ZP_06480467.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298489518|ref|ZP_07007527.1| Transcriptional regulator of sugar metabolism [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298155945|gb|EFH97056.1| Transcriptional regulator of sugar metabolism [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330869554|gb|EGH04263.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 255
Score = 43.3 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 45/151 (29%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLTRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|317054231|ref|YP_004118256.1| transcriptional regulator, DeoR family [Pantoea sp. At-9b]
gi|316952226|gb|ADU71700.1| transcriptional regulator, DeoR family [Pantoea sp. At-9b]
Length = 249
Score = 43.3 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+ K+ A +A+Q + G + + G+T E + LL
Sbjct: 73 QISSKQQIALKAVQLIQPGQVVIIDGGTTTAEMIKLLPQ 111
>gi|42561173|ref|NP_975624.1| DeoR family sucrose PTS repressor [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|42492671|emb|CAE77266.1| Sucrose PTS repressor, DeoR family [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301320909|gb|ADK69552.1| transcriptional regulator, DeoR family [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 244
Score = 43.3 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTENFC 62
K A++A +YV +G + + TG+T K+ + L +K + NG+ + + ++ E
Sbjct: 81 KDLIAQKASEYVSNGDLIFLDTGTTTKQMIKYLINKKIIVVTNGYSIALKLVEQDIEVIL 140
Query: 63 KIHHIPLHSPEDVSSV------DLSID----GFDEIDSRLRLIKGYGGALLREKIIAHAA 112
I + + + + D G + + S+ AL++EK I +
Sbjct: 141 LGGSINPSTHATIGELALKNLDNFYFDKVFIGMNNLSSQHFYTTNIKEALIKEKAI-KNS 199
Query: 113 SRFIVIGDESKR 124
+ ++ D SK
Sbjct: 200 DKSFILMDSSKF 211
>gi|71736196|ref|YP_277277.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556749|gb|AAZ35960.1| transcriptional regulator, DeoR family [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320321667|gb|EFW77766.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331130|gb|EFW87101.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330881928|gb|EGH16077.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 255
Score = 43.3 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 45/151 (29%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D L
Sbjct: 135 EPVLLMTGGTWDPHSDSFQGQVAEQVLRSYDFDQLFIGADGIDLTRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|320194621|gb|EFW69251.1| Transcriptional repressor of aga operon [Escherichia coli
WV_060327]
gi|323189245|gb|EFZ74529.1| putative aga operon transcriptional repressor [Escherichia coli
RN587/1]
gi|324008804|gb|EGB78023.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 57-2]
Length = 274
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|170765676|ref|ZP_02900487.1| transcriptional regulator, DeoR family [Escherichia albertii
TW07627]
gi|170124822|gb|EDS93753.1| transcriptional regulator, DeoR family [Escherichia albertii
TW07627]
Length = 269
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRIILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|332086142|gb|EGI91304.1| putative aga operon transcriptional repressor [Shigella boydii
5216-82]
Length = 269
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|313890577|ref|ZP_07824205.1| transcriptional regulator, DeoR family [Streptococcus
pseudoporcinus SPIN 20026]
gi|313121094|gb|EFR44205.1| transcriptional regulator, DeoR family [Streptococcus
pseudoporcinus SPIN 20026]
Length = 237
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 47/145 (32%), Gaps = 13/145 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTEN 60
Q K+ A++A +++ D + + G+T + + L K + N R +
Sbjct: 67 QSKQKLAKKAAEFIHDNDVIFIDAGTTTEFLISQLFPKNVTVVTNSIHHAAKLVDRKIKT 126
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL---------REKIIAHA 111
+ + + +V L D + G L ++ I
Sbjct: 127 IIIGGFVKQTTDASIGNVALEQIQQMNFDKAFLGMNGLDNFYLTTPDMEEAVIKRTILSN 186
Query: 112 ASRFIVIGDESKRVDFLGRGMLPIE 136
A V+ D SK + PIE
Sbjct: 187 AKMSYVLADSSKVGQVSFVKVAPIE 211
>gi|150376991|ref|YP_001313587.1| DeoR family transcriptional regulator [Sinorhizobium medicae
WSM419]
gi|150031538|gb|ABR63654.1| transcriptional regulator, DeoR family [Sinorhizobium medicae
WSM419]
Length = 288
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 9/84 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K +A + V DGM + + +G+T L +G R + ++
Sbjct: 111 AKAAIGLKAAELVKDGMVVFLDSGTTTLAVAHAL-----DGLRDLTVCTTG----LAIAL 161
Query: 66 HIPLHSPEDVSSVDLSIDGFDEID 89
H+ V + ID +E
Sbjct: 162 HMCRQPRARVHMLGGEIDPAEEAA 185
>gi|331674672|ref|ZP_08375431.1| putative aga operon transcriptional repressor [Escherichia coli
TA280]
gi|331068111|gb|EGI39507.1| putative aga operon transcriptional repressor [Escherichia coli
TA280]
Length = 269
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|295090990|emb|CBK77097.1| Transcriptional regulators of sugar metabolism [Clostridium cf.
saccharolyticum K10]
Length = 257
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ K ARRA++ + DG LG+ G+TA+EF L K
Sbjct: 76 EEKAAIARRAVELIEDGDVLGIDIGTTAREFARALLGKRK 115
>gi|291086981|ref|ZP_06571747.1| transcriptional regulator, DeoR family [Clostridium sp. M62/1]
gi|291076549|gb|EFE13913.1| transcriptional regulator, DeoR family [Clostridium sp. M62/1]
Length = 264
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ K ARRA++ + DG LG+ G+TA+EF L K
Sbjct: 83 EEKAAIARRAVELIEDGDVLGIDIGTTAREFARALLGKRK 122
>gi|325275309|ref|ZP_08141262.1| DeoR family transcriptional regulator [Pseudomonas sp. TJI-51]
gi|324099557|gb|EGB97450.1| DeoR family transcriptional regulator [Pseudomonas sp. TJI-51]
Length = 258
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 46/148 (31%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRN---- 57
K+ AR A+ + + + + +GST + L + + N V S
Sbjct: 78 KKAIARAAVGRIREHARIIIDSGSTTAAMIPELGRQPGLVVMTNSLNVARAISEVEHEPV 137
Query: 58 -----------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+E+F + D + + DG D L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLARGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A IV+ + K + LP
Sbjct: 194 VMAEVAREVIVMVESDKVGRKIPNLELP 221
>gi|330890270|gb|EGH22931.1| DeoR family transcriptional regulator [Pseudomonas syringae pv.
mori str. 301020]
Length = 255
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 45/151 (29%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVSRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLTRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREIVVMVEADKVGRKIPNLELP 221
>gi|300938039|ref|ZP_07152818.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|300456969|gb|EFK20462.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
Length = 269
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|300925442|ref|ZP_07141323.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|301326783|ref|ZP_07220093.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|300418438|gb|EFK01749.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300846564|gb|EFK74324.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
Length = 269
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|300726114|ref|ZP_07059571.1| galactitol utilization operon repressor [Prevotella bryantii B14]
gi|299776584|gb|EFI73137.1| galactitol utilization operon repressor [Prevotella bryantii B14]
Length = 255
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 22/141 (15%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTA---KEFM----------------ILLADK 42
D K+ AR A++ + +G T+ + +GST + ++L
Sbjct: 75 DHQDAKQAIAREAVKLIKNGDTIILDSGSTTTEIAHLIMGFTNLTVITNALNIAMILGSN 134
Query: 43 IANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
V T + V L+ G I+ L L
Sbjct: 135 PGINLLVTGGEFKSPTLSLTGQKAADFFVNLHADKVFLATAG---INIETGLTYPSVSDL 191
Query: 103 LREKIIAHAASRFIVIGDESK 123
+ +K + A+ ++ D SK
Sbjct: 192 VVKKAMIDASEHVYLVADSSK 212
>gi|170680176|ref|YP_001745406.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
SMS-3-5]
gi|218706753|ref|YP_002414272.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
UMN026]
gi|293406743|ref|ZP_06650669.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
FVEC1412]
gi|293412508|ref|ZP_06655231.1| DNA-binding transcriptional regulator AgaR [Escherichia coli B354]
gi|298382483|ref|ZP_06992080.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
FVEC1302]
gi|300897887|ref|ZP_07116270.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|301021971|ref|ZP_07185929.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|331664744|ref|ZP_08365649.1| putative aga operon transcriptional repressor [Escherichia coli
TA143]
gi|170517894|gb|ACB16072.1| transcriptional regulator, DeoR family [Escherichia coli SMS-3-5]
gi|218433850|emb|CAR14767.1| DNA-binding transcriptional dual regulator [Escherichia coli
UMN026]
gi|284923155|emb|CBG36249.1| putative aga operon transcriptional repressor [Escherichia coli
042]
gi|291426749|gb|EFE99781.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
FVEC1412]
gi|291469279|gb|EFF11770.1| DNA-binding transcriptional regulator AgaR [Escherichia coli B354]
gi|298277623|gb|EFI19139.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
FVEC1302]
gi|300358401|gb|EFJ74271.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|300397776|gb|EFJ81314.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|331057992|gb|EGI29974.1| putative aga operon transcriptional repressor [Escherichia coli
TA143]
Length = 269
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|157158868|ref|YP_001464604.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
E24377A]
gi|157080898|gb|ABV20606.1| transcriptional regulator, DeoR family [Escherichia coli E24377A]
Length = 269
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|15803669|ref|NP_289702.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H7 EDL933]
gi|15833263|ref|NP_312036.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H7 str. Sakai]
gi|16131023|ref|NP_417600.1| DNA-binding transcriptional repressor of the aga regulon
[Escherichia coli str. K-12 substr. MG1655]
gi|26249713|ref|NP_755753.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
CFT073]
gi|89109897|ref|AP_003677.1| DNA-binding transcriptional dual regulator [Escherichia coli str.
K-12 substr. W3110]
gi|110643374|ref|YP_671104.1| DNA-binding transcriptional regulator AgaR [Escherichia coli 536]
gi|157162614|ref|YP_001459932.1| DNA-binding transcriptional regulator AgaR [Escherichia coli HS]
gi|168749275|ref|ZP_02774297.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4113]
gi|168754109|ref|ZP_02779116.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4401]
gi|168762092|ref|ZP_02787099.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4501]
gi|168769546|ref|ZP_02794553.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4486]
gi|168773204|ref|ZP_02798211.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4196]
gi|168781272|ref|ZP_02806279.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4076]
gi|168786011|ref|ZP_02811018.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC869]
gi|168797729|ref|ZP_02822736.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC508]
gi|170018619|ref|YP_001723573.1| DNA-binding transcriptional regulator AgaR [Escherichia coli ATCC
8739]
gi|170082669|ref|YP_001731989.1| DNA-binding transcriptional dual regulator [Escherichia coli str.
K-12 substr. DH10B]
gi|191169171|ref|ZP_03030928.1| transcriptional regulator, DeoR family [Escherichia coli B7A]
gi|191172212|ref|ZP_03033755.1| transcriptional regulator, DeoR family [Escherichia coli F11]
gi|193062039|ref|ZP_03043135.1| transcriptional regulator, DeoR family [Escherichia coli E22]
gi|193067356|ref|ZP_03048324.1| transcriptional regulator, DeoR family [Escherichia coli E110019]
gi|194427728|ref|ZP_03060275.1| transcriptional regulator, DeoR family [Escherichia coli B171]
gi|194433770|ref|ZP_03066045.1| transcriptional regulator, DeoR family [Shigella dysenteriae 1012]
gi|194438774|ref|ZP_03070860.1| transcriptional regulator, DeoR family [Escherichia coli 101-1]
gi|195938350|ref|ZP_03083732.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H7 str. EC4024]
gi|208807061|ref|ZP_03249398.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4206]
gi|208812409|ref|ZP_03253738.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4045]
gi|208820734|ref|ZP_03261054.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4042]
gi|209398713|ref|YP_002272602.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4115]
gi|209920606|ref|YP_002294690.1| DNA-binding transcriptional regulator AgaR [Escherichia coli SE11]
gi|217327685|ref|ZP_03443768.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. TW14588]
gi|218551577|ref|YP_002385369.1| DNA-binding transcriptional regulator AgaR [Escherichia fergusonii
ATCC 35469]
gi|218555701|ref|YP_002388614.1| DNA-binding transcriptional regulator AgaR [Escherichia coli IAI1]
gi|218691425|ref|YP_002399637.1| DNA-binding transcriptional regulator AgaR [Escherichia coli ED1a]
gi|218696836|ref|YP_002404503.1| DNA-binding transcriptional regulator AgaR [Escherichia coli 55989]
gi|218701904|ref|YP_002409533.1| DNA-binding transcriptional regulator AgaR [Escherichia coli IAI39]
gi|227887855|ref|ZP_04005660.1| DNA-binding transcriptional regulator AgaR [Escherichia coli 83972]
gi|238902237|ref|YP_002928033.1| DNA-binding transcriptional dual regulator [Escherichia coli
BW2952]
gi|253772035|ref|YP_003034866.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163073|ref|YP_003046181.1| DNA-binding transcriptional regulator AgaR [Escherichia coli B str.
REL606]
gi|254795079|ref|YP_003079916.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H7 str. TW14359]
gi|260845943|ref|YP_003223721.1| DNA-binding transcriptional dual regulator AgaR [Escherichia coli
O103:H2 str. 12009]
gi|261228139|ref|ZP_05942420.1| DNA-binding transcriptional dual regulator [Escherichia coli
O157:H7 str. FRIK2000]
gi|261254996|ref|ZP_05947529.1| DNA-binding transcriptional dual regulator AgaR [Escherichia coli
O157:H7 str. FRIK966]
gi|291284506|ref|YP_003501324.1| putative aga operon transcriptional repressor [Escherichia coli
O55:H7 str. CB9615]
gi|293416563|ref|ZP_06659202.1| hypothetical protein ECDG_03321 [Escherichia coli B185]
gi|293449466|ref|ZP_06663887.1| hypothetical protein ECCG_02498 [Escherichia coli B088]
gi|297517783|ref|ZP_06936169.1| DNA-binding transcriptional regulator AgaR [Escherichia coli OP50]
gi|300817620|ref|ZP_07097836.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|300821737|ref|ZP_07101883.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300905714|ref|ZP_07123450.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300916657|ref|ZP_07133375.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300954854|ref|ZP_07167278.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|301048027|ref|ZP_07195068.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|301301815|ref|ZP_07207949.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|301644836|ref|ZP_07244810.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|306816523|ref|ZP_07450655.1| DNA-binding transcriptional regulator AgaR [Escherichia coli NC101]
gi|307139816|ref|ZP_07499172.1| DNA-binding transcriptional regulator AgaR [Escherichia coli H736]
gi|307313164|ref|ZP_07592790.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|309793705|ref|ZP_07688131.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|312972602|ref|ZP_07786775.1| putative aga operon transcriptional repressor [Escherichia coli
1827-70]
gi|331643829|ref|ZP_08344960.1| putative aga operon transcriptional repressor [Escherichia coli
H736]
gi|331648932|ref|ZP_08350020.1| putative aga operon transcriptional repressor [Escherichia coli
M605]
gi|331654732|ref|ZP_08355732.1| putative aga operon transcriptional repressor [Escherichia coli
M718]
gi|331659421|ref|ZP_08360363.1| putative aga operon transcriptional repressor [Escherichia coli
TA206]
gi|331669843|ref|ZP_08370688.1| putative aga operon transcriptional repressor [Escherichia coli
TA271]
gi|331679210|ref|ZP_08379882.1| putative aga operon transcriptional repressor [Escherichia coli
H591]
gi|331684781|ref|ZP_08385373.1| putative aga operon transcriptional repressor [Escherichia coli
H299]
gi|82583667|sp|P0ACK4|AGAR_ECO57 RecName: Full=Putative aga operon transcriptional repressor
gi|82583668|sp|P0ACK3|AGAR_ECOL6 RecName: Full=Putative aga operon transcriptional repressor
gi|82583669|sp|P0ACK2|AGAR_ECOLI RecName: Full=Putative aga operon transcriptional repressor
gi|8895745|gb|AAF81081.1|AF228498_1 AgaR [Escherichia coli]
gi|12517727|gb|AAG58261.1|AE005542_3 putative DEOR-type transcriptional regulator of aga operon
[Escherichia coli O157:H7 str. EDL933]
gi|26110141|gb|AAN82327.1|AE016767_87 Putative aga operon transcriptional repressor [Escherichia coli
CFT073]
gi|606071|gb|AAA57934.1| ORF_f269 [Escherichia coli str. K-12 substr. MG1655]
gi|1789519|gb|AAC76165.1| DNA-binding transcriptional repressor of the aga regulon
[Escherichia coli str. K-12 substr. MG1655]
gi|13363482|dbj|BAB37432.1| transcriptional repressor of aga operon [Escherichia coli O157:H7
str. Sakai]
gi|85675928|dbj|BAE77178.1| DNA-binding transcriptional dual regulator [Escherichia coli str.
K12 substr. W3110]
gi|110344966|gb|ABG71203.1| putative aga operon transcriptional repressor [Escherichia coli
536]
gi|157068294|gb|ABV07549.1| transcriptional regulator, DeoR family [Escherichia coli HS]
gi|169753547|gb|ACA76246.1| transcriptional regulator, DeoR family [Escherichia coli ATCC 8739]
gi|169890504|gb|ACB04211.1| DNA-binding transcriptional dual regulator [Escherichia coli str.
K-12 substr. DH10B]
gi|187770787|gb|EDU34631.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4196]
gi|188016366|gb|EDU54488.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4113]
gi|189001030|gb|EDU70016.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4076]
gi|189358467|gb|EDU76886.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4401]
gi|189361462|gb|EDU79881.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4486]
gi|189367604|gb|EDU86020.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4501]
gi|189373835|gb|EDU92251.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC869]
gi|189379812|gb|EDU98228.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC508]
gi|190900777|gb|EDV60569.1| transcriptional regulator, DeoR family [Escherichia coli B7A]
gi|190907522|gb|EDV67118.1| transcriptional regulator, DeoR family [Escherichia coli F11]
gi|192932259|gb|EDV84857.1| transcriptional regulator, DeoR family [Escherichia coli E22]
gi|192959313|gb|EDV89748.1| transcriptional regulator, DeoR family [Escherichia coli E110019]
gi|194414236|gb|EDX30511.1| transcriptional regulator, DeoR family [Escherichia coli B171]
gi|194418033|gb|EDX34127.1| transcriptional regulator, DeoR family [Shigella dysenteriae 1012]
gi|194422246|gb|EDX38247.1| transcriptional regulator, DeoR family [Escherichia coli 101-1]
gi|208726862|gb|EDZ76463.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4206]
gi|208733686|gb|EDZ82373.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4045]
gi|208740857|gb|EDZ88539.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4042]
gi|209160113|gb|ACI37546.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4115]
gi|209758678|gb|ACI77651.1| transcriptional repressor of aga operon [Escherichia coli]
gi|209758680|gb|ACI77652.1| transcriptional repressor of aga operon [Escherichia coli]
gi|209758682|gb|ACI77653.1| transcriptional repressor of aga operon [Escherichia coli]
gi|209758684|gb|ACI77654.1| transcriptional repressor of aga operon [Escherichia coli]
gi|209758686|gb|ACI77655.1| transcriptional repressor of aga operon [Escherichia coli]
gi|209913865|dbj|BAG78939.1| putative transcriptional regulator [Escherichia coli SE11]
gi|217320052|gb|EEC28477.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. TW14588]
gi|218353568|emb|CAU99732.1| DNA-binding transcriptional dual regulator [Escherichia coli 55989]
gi|218359119|emb|CAQ91780.1| DNA-binding transcriptional dual regulator [Escherichia fergusonii
ATCC 35469]
gi|218362469|emb|CAR00093.1| DNA-binding transcriptional dual regulator [Escherichia coli IAI1]
gi|218371890|emb|CAR19746.1| DNA-binding transcriptional dual regulator [Escherichia coli IAI39]
gi|218428989|emb|CAV17945.1| DNA-binding transcriptional dual regulator [Escherichia coli ED1a]
gi|222034853|emb|CAP77596.1| aga operon transcriptional repressor [Escherichia coli LF82]
gi|227835251|gb|EEJ45717.1| DNA-binding transcriptional regulator AgaR [Escherichia coli 83972]
gi|238860920|gb|ACR62918.1| DNA-binding transcriptional dual regulator [Escherichia coli
BW2952]
gi|242378674|emb|CAQ33464.1| AgaR transcriptional repressor [Escherichia coli BL21(DE3)]
gi|253323079|gb|ACT27681.1| transcriptional regulator, DeoR family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974974|gb|ACT40645.1| DNA-binding transcriptional dual regulator [Escherichia coli B str.
REL606]
gi|253979130|gb|ACT44800.1| DNA-binding transcriptional dual regulator [Escherichia coli
BL21(DE3)]
gi|254594479|gb|ACT73840.1| DNA-binding transcriptional dual regulator [Escherichia coli
O157:H7 str. TW14359]
gi|257761090|dbj|BAI32587.1| DNA-binding transcriptional dual regulator AgaR [Escherichia coli
O103:H2 str. 12009]
gi|260447839|gb|ACX38261.1| transcriptional regulator, DeoR family [Escherichia coli DH1]
gi|281180177|dbj|BAI56507.1| putative transcriptional regulator [Escherichia coli SE15]
gi|290764379|gb|ADD58340.1| Putative aga operon transcriptional repressor [Escherichia coli
O55:H7 str. CB9615]
gi|291322556|gb|EFE61985.1| hypothetical protein ECCG_02498 [Escherichia coli B088]
gi|291431919|gb|EFF04902.1| hypothetical protein ECDG_03321 [Escherichia coli B185]
gi|300300103|gb|EFJ56488.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|300318195|gb|EFJ67979.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|300402456|gb|EFJ85994.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300416040|gb|EFJ99350.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300525875|gb|EFK46944.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300529918|gb|EFK50980.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|300842796|gb|EFK70556.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|301076882|gb|EFK91688.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|305850088|gb|EFM50547.1| DNA-binding transcriptional regulator AgaR [Escherichia coli NC101]
gi|306907075|gb|EFN37583.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|307555230|gb|ADN48005.1| transcriptional regulator [Escherichia coli ABU 83972]
gi|308122662|gb|EFO59924.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|309703557|emb|CBJ02897.1| putative aga operon transcriptional repressor [Escherichia coli
ETEC H10407]
gi|310332544|gb|EFP99757.1| putative aga operon transcriptional repressor [Escherichia coli
1827-70]
gi|312947693|gb|ADR28520.1| DNA-binding transcriptional regulator AgaR [Escherichia coli O83:H1
str. NRG 857C]
gi|315062437|gb|ADT76764.1| DNA-binding transcriptional dual regulator [Escherichia coli W]
gi|315137719|dbj|BAJ44878.1| putative aga operon transcriptional repressor [Escherichia coli
DH1]
gi|315257055|gb|EFU37023.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 85-1]
gi|315294943|gb|EFU54282.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 153-1]
gi|315297816|gb|EFU57090.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 16-3]
gi|315617209|gb|EFU97818.1| putative aga operon transcriptional repressor [Escherichia coli
3431]
gi|320189480|gb|EFW64139.1| Transcriptional repressor of aga operon [Escherichia coli O157:H7
str. EC1212]
gi|320202045|gb|EFW76620.1| Transcriptional repressor of aga operon [Escherichia coli EC4100B]
gi|320640201|gb|EFX09773.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H7 str. G5101]
gi|320645497|gb|EFX14506.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H- str. 493-89]
gi|320650808|gb|EFX19265.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H- str. H 2687]
gi|320656188|gb|EFX24100.1| DNA-binding transcriptional regulator AgaR [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320661878|gb|EFX29286.1| DNA-binding transcriptional regulator AgaR [Escherichia coli O55:H7
str. USDA 5905]
gi|320667028|gb|EFX34004.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O157:H7 str. LSU-61]
gi|323163184|gb|EFZ49017.1| putative aga operon transcriptional repressor [Escherichia coli
E128010]
gi|323173616|gb|EFZ59245.1| putative aga operon transcriptional repressor [Escherichia coli
LT-68]
gi|323376975|gb|ADX49243.1| transcriptional regulator, DeoR family [Escherichia coli KO11]
gi|323936177|gb|EGB32471.1| deoR family protein Bacterial regulatory protein [Escherichia coli
E1520]
gi|323941770|gb|EGB37949.1| deoR family protein regulatory protein [Escherichia coli E482]
gi|323946797|gb|EGB42815.1| deoR family protein Bacterial regulatory protein [Escherichia coli
H120]
gi|323966314|gb|EGB61748.1| deoR family protein regulatory protein [Escherichia coli M863]
gi|323970306|gb|EGB65577.1| deoR family protein regulatory protein [Escherichia coli TA007]
gi|323979148|gb|EGB74226.1| deoR family protein regulatory protein [Escherichia coli TW10509]
gi|324012073|gb|EGB81292.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 60-1]
gi|324018274|gb|EGB87493.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 117-3]
gi|324119496|gb|EGC13378.1| deoR family protein regulatory protein [Escherichia coli E1167]
gi|325499838|gb|EGC97697.1| DNA-binding transcriptional regulator AgaR [Escherichia fergusonii
ECD227]
gi|326337832|gb|EGD61666.1| Transcriptional repressor of aga operon [Escherichia coli O157:H7
str. 1125]
gi|326347398|gb|EGD71123.1| Transcriptional repressor of aga operon [Escherichia coli O157:H7
str. 1044]
gi|327251914|gb|EGE63600.1| putative aga operon transcriptional repressor [Escherichia coli
STEC_7v]
gi|330909191|gb|EGH37705.1| transcriptional repressor of aga operon [Escherichia coli AA86]
gi|331037300|gb|EGI09524.1| putative aga operon transcriptional repressor [Escherichia coli
H736]
gi|331042679|gb|EGI14821.1| putative aga operon transcriptional repressor [Escherichia coli
M605]
gi|331048114|gb|EGI20191.1| putative aga operon transcriptional repressor [Escherichia coli
M718]
gi|331054003|gb|EGI26032.1| putative aga operon transcriptional repressor [Escherichia coli
TA206]
gi|331062756|gb|EGI34670.1| putative aga operon transcriptional repressor [Escherichia coli
TA271]
gi|331073275|gb|EGI44598.1| putative aga operon transcriptional repressor [Escherichia coli
H591]
gi|331078396|gb|EGI49602.1| putative aga operon transcriptional repressor [Escherichia coli
H299]
gi|332345087|gb|AEE58421.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 269
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|269977645|ref|ZP_06184612.1| DeoR family transcriptional regulator [Mobiluncus mulieris 28-1]
gi|269934248|gb|EEZ90815.1| DeoR family transcriptional regulator [Mobiluncus mulieris 28-1]
Length = 320
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI 43
K+ AR A + V G +G+ G+T+ E +A ++
Sbjct: 138 KQRLARAAAKLVQPGDIIGVNGGTTSTEVAREIALRV 174
>gi|227874555|ref|ZP_03992718.1| DeoR family transcriptional regulator [Mobiluncus mulieris ATCC
35243]
gi|306817842|ref|ZP_07451581.1| DeoR family transcriptional regulator [Mobiluncus mulieris ATCC
35239]
gi|227844764|gb|EEJ54910.1| DeoR family transcriptional regulator [Mobiluncus mulieris ATCC
35243]
gi|304649321|gb|EFM46607.1| DeoR family transcriptional regulator [Mobiluncus mulieris ATCC
35239]
Length = 328
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI 43
K+ AR A + V G +G+ G+T+ E +A ++
Sbjct: 146 KQRLARAAAKLVQPGDIIGVNGGTTSTEVAREIALRV 182
>gi|269118916|ref|YP_003307093.1| DeoR family transcriptional regulator [Sebaldella termitidis ATCC
33386]
gi|268612794|gb|ACZ07162.1| transcriptional regulator, DeoR family [Sebaldella termitidis ATCC
33386]
Length = 245
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M+ + K A+ A V +G T+ + +G+T + + L +K + ++ ++ N
Sbjct: 75 MNV-KFKERIAKYASSLVQNGETIYLDSGTTTELMIKYLKNK-----DITIVTTNTQILN 128
Query: 61 FCKIHHIPLH 70
+
Sbjct: 129 QLEDTKFECI 138
>gi|229830168|ref|ZP_04456237.1| hypothetical protein GCWU000342_02275 [Shuttleworthia satelles DSM
14600]
gi|229791466|gb|EEP27580.1| hypothetical protein GCWU000342_02275 [Shuttleworthia satelles DSM
14600]
Length = 249
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 52/163 (31%), Gaps = 29/163 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR A + DG + + G+T + + + +G + + ++ +
Sbjct: 81 KLAIAREAAGLIRDGELIYLDAGTTTELMIDFI-----HGKDLTFVTNAISHARRLGQRG 135
Query: 67 IPLHSP------------EDVSSVDL-------SIDGFDEIDSRLRLIKGYGGALLREKI 107
+ + +S+ + + G + +D + +K
Sbjct: 136 YTCYILGGQFKSVTEAIVGEEASLSVRKYNFSRAFLGANGVDLQAGFTTPELKEAYIKKQ 195
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALK 150
A+ + ++ D SK + PI F + L A +
Sbjct: 196 AMAASRQVYILADASKF-----GRVAPISFGSFAEARVLVAGQ 233
>gi|301026078|ref|ZP_07189554.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|299879858|gb|EFI88069.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|323183083|gb|EFZ68481.1| putative aga operon transcriptional repressor [Escherichia coli
1357]
gi|332086491|gb|EGI91638.1| putative aga operon transcriptional repressor [Shigella dysenteriae
155-74]
gi|332086578|gb|EGI91722.1| putative aga operon transcriptional repressor [Shigella dysenteriae
155-74]
Length = 258
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 81 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 136
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 137 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 194
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 195 LNRRMCE-VAERIIVVTDSSKF 215
>gi|313891177|ref|ZP_07824796.1| transcriptional regulator, DeoR family [Streptococcus
pseudoporcinus SPIN 20026]
gi|313120540|gb|EFR43660.1| transcriptional regulator, DeoR family [Streptococcus
pseudoporcinus SPIN 20026]
Length = 247
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A +A + V D T+ + +GST +L N + N
Sbjct: 72 KRKIAEKAAELVQDNETIMIESGSTCALLAEVLCQTKRNIKIITNSCFIANFLRQYDSCQ 131
Query: 67 I-----PLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I +V+ VD G D ++ + + +A
Sbjct: 132 IILLGGNYQPNSEVTVGPLLKQMVDLFHVDRVFAGTDGFSPKIGFMCKDMMRCESVQYMA 191
Query: 110 HAASRFIVIGDESKR 124
A I++ D SK
Sbjct: 192 DVAEEMIILTDSSKF 206
>gi|256390103|ref|YP_003111667.1| DeoR family transcriptional regulator [Catenulispora acidiphila DSM
44928]
gi|256356329|gb|ACU69826.1| transcriptional regulator, DeoR family [Catenulispora acidiphila
DSM 44928]
Length = 261
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 55/154 (35%), Gaps = 25/154 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----ANGFRVQVIPSSRN-TEN 60
K+ A A V G T+G+ G+TA E LA + G V V+ ++ N +
Sbjct: 78 KQRIASVAAGMVAVGSTVGINGGTTATEVARALATRADLAGEQRGPAVTVVTNALNIAQE 137
Query: 61 FCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGYGGA 101
++ + + V S +DL+I G D +D+
Sbjct: 138 LVVRPYLHVVATGGVGSPKSYELVGPVAAAMLERVALDLAILGVDALDADHGASAHNEAE 197
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ +A A +V+ D SK + PI
Sbjct: 198 ATVNQTLASRARHVVVVADSSKLGRRAFARICPI 231
>gi|315499172|ref|YP_004087976.1| transcriptional regulator, deor family [Asticcacaulis excentricus
CB 48]
gi|315417184|gb|ADU13825.1| transcriptional regulator, DeoR family [Asticcacaulis excentricus
CB 48]
Length = 282
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 21/166 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR AR A+ Y+ G+++ + GST ++A++ + + +
Sbjct: 97 KRAIARAALDYLKPGISMIIDGGSTTYTMANMMANEPYHVLTTSIPILQCLLDRSKVKVT 156
Query: 67 IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLR-------------EKIIAHA 111
+P + L DG + S ++ G AL R E+ +
Sbjct: 157 LPGGELFREQRIILNPYEDGMLQNFSAAKMFIGC-QALTRNGLMQSDTLLVQSERRLMER 215
Query: 112 ASRFIVIGDESKRVDFLGRGMLP-----IEIDQFGVNKTLSALKEV 152
A + IV+ D SK + P + I G+ + E
Sbjct: 216 ADQVIVLADSSKIDAPASLSVCPLTAIDVVITDEGLTDSAREWLEH 261
>gi|188494332|ref|ZP_03001602.1| transcriptional regulator, DeoR family [Escherichia coli 53638]
gi|188489531|gb|EDU64634.1| transcriptional regulator, DeoR family [Escherichia coli 53638]
Length = 269
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|327470510|gb|EGF15966.1| lactose PTS family porter repressor [Streptococcus sanguinis SK330]
Length = 251
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNHHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|320010577|gb|ADW05427.1| transcriptional regulator, DeoR family [Streptomyces flavogriseus
ATCC 33331]
Length = 259
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 23/141 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK--IANGFRVQVIPSSR--NTENFC 62
K+ A+ A + + G T+G+ G+T E LA + A G + ++
Sbjct: 78 KQRIAKAAAELIPTGSTVGLNGGTTTSEVARELALRPEPAGGGVALTVVTNAINIANELA 137
Query: 63 KIHHIPLHSPEDVSSVDLS------IDGFDEIDSRLRLIKGYGGALLR------------ 104
+ + V+ + +D + I G R
Sbjct: 138 VRPQVKIVVTGGVARPNSYELVGPLVDSVLRTLALDYTILGVDAVHARFGAATHDESEAG 197
Query: 105 -EKIIAHAASRFIVIGDESKR 124
+ +A A +V+ D SK
Sbjct: 198 ANRALAECAGTVVVVADSSKL 218
>gi|329768329|ref|ZP_08259825.1| hypothetical protein HMPREF0428_01522 [Gemella haemolysans M341]
gi|328837204|gb|EGF86842.1| hypothetical protein HMPREF0428_01522 [Gemella haemolysans M341]
Length = 249
Score = 42.9 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
+ K+ AR+ + + D T+ +G GST L D+ N
Sbjct: 78 EEKKQIARKVSELIKDNETIFIGPGSTTSYLAEYLQDRDIN 118
>gi|83319550|ref|YP_424585.1| DeoR family transcriptional regulator [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283436|gb|ABC01368.1| transcriptional regulator, DeoR family [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 244
Score = 42.9 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTENFC 62
K A++A +YV +G + + TG+T K+ + L +K + NG+ + + ++ E
Sbjct: 81 KDLIAQKASEYVSNGDLIFLDTGTTTKQMIKYLINKKIIVVTNGYSIALELVEQDIEVIL 140
Query: 63 KIHHIPLHSPEDVSSV------DLSID----GFDEIDSRLRLIKGYGGALLREKIIAHAA 112
I + + + + D G + + S+ AL++EK I +
Sbjct: 141 LGGSINPSTHATIGELALKNLDNFYFDKVFIGMNNLSSQRFYTTNIKEALIKEKAI-KNS 199
Query: 113 SRFIVIGDESKR 124
+ ++ D SK
Sbjct: 200 DKSFILMDSSKF 211
>gi|322392203|ref|ZP_08065664.1| lactose PTS family porter repressor [Streptococcus peroris ATCC
700780]
gi|321144738|gb|EFX40138.1| lactose PTS family porter repressor [Streptococcus peroris ATCC
700780]
Length = 246
Score = 42.9 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 31/153 (20%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q KR A++A + + + + GST + L + + V+ +S +
Sbjct: 77 QEKRLIAQKAASLIKEKNVIFVDAGSTTAFLIKEL-----DRKDITVVTNSIHHAVQLVD 131
Query: 65 HHIPL-----------------HSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGAL 102
IP + ++ + + ++G DE ++
Sbjct: 132 KQIPTVIIGGGVKMTTDASIGGVALNQINQLHFDRAFIGMNGVDEGYYTTPDMEEGAV-- 189
Query: 103 LREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ I A + V+ D SK + PI
Sbjct: 190 --KRAILENAKQAYVLVDSSKIGQSCFAKVAPI 220
>gi|90425897|ref|YP_534267.1| DeoR family transcriptional regulator [Rhodopseudomonas palustris
BisB18]
gi|90107911|gb|ABD89948.1| transcriptional regulator, DeoR family [Rhodopseudomonas palustris
BisB18]
Length = 258
Score = 42.9 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 17/147 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEF----------MI----LLADKIANGFRVQ 50
K+ AR AI+ + DG TL + GST F +I L +A ++
Sbjct: 77 DAKQAIARAAIELIEDGDTLILDAGSTVAAFSRLLLQRRLRIITNNLALLPFLAKAPAIE 136
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
++ + PL + E + + +I D + L + + + ++
Sbjct: 137 LVVLGGALRSTSMSTMGPLAN-EALRRLSATRAIMSADGVVGGRGLCEADLEQVALKSLM 195
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPI 135
A IV+ D SK P+
Sbjct: 196 MQQAKELIVLADASKLGRAEQLAWAPL 222
>gi|324994958|gb|EGC26871.1| lactose PTS family porter repressor [Streptococcus sanguinis SK678]
gi|325696274|gb|EGD38165.1| lactose PTS family porter repressor [Streptococcus sanguinis SK160]
Length = 251
Score = 42.9 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNHHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|297561408|ref|YP_003680382.1| DeoR family transcriptional regulator [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296845856|gb|ADH67876.1| transcriptional regulator, DeoR family [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 257
Score = 42.9 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 18/147 (12%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------------IANGFR 48
KR A A V D + + GST LA + A G
Sbjct: 72 AKRRIAEHAAALVEDDHVVLLDAGSTTTFVAERLARRSGPTVVTSGLGPMAALHDAEGIE 131
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ V+ + + ++ ++ G D + L +++
Sbjct: 132 LVVVGGRVRRRRGSIVGDYAHGVLDRIT-PHIAFIGADGLLPGRGLNCPSPEIAAAKELQ 190
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPI 135
A R V+ D +K +
Sbjct: 191 MRGARRIFVVADSTKVGSGPHPYWAVV 217
>gi|260768848|ref|ZP_05877782.1| transcriptional repressor of aga operon [Vibrio furnissii CIP
102972]
gi|260616878|gb|EEX42063.1| transcriptional repressor of aga operon [Vibrio furnissii CIP
102972]
Length = 259
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANG 46
+ +K A V DG TL + +GST + L A +AN
Sbjct: 75 NQD-IKSQLGAYAASLVEDGDTLILDSGSTTEHIAFHLTHKKQLKVMTNAINIAYHLANH 133
Query: 47 FRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++VI + +N+ + L + + L +DGFD+ G
Sbjct: 134 EDIEVIVTGGVMRKNSYSLHGESGEALLGQFRFNKLFLGVDGFDKSAGITTPHSGEANI- 192
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + AA I + D SK
Sbjct: 193 --NRSMVAAAQMVIAVADSSKF 212
>gi|83589472|ref|YP_429481.1| GntR family transcriptional regulator [Moorella thermoacetica ATCC
39073]
gi|83572386|gb|ABC18938.1| transcriptional regulator, GntR family [Moorella thermoacetica ATCC
39073]
Length = 254
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 28/151 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------------ 54
K AR+A + V+DG T+ + G+T + LA + N + V+ +
Sbjct: 80 KLAIARKAAELVLDGDTILLNAGTT----ITALAQLLKNHNNLTVVTNTVNIAMELAHSE 135
Query: 55 ---------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLR 104
+ T+++ + + ++ V + G + I A
Sbjct: 136 GINLVLTGGNMRTKSYAMVGSLTERVLREI-HVQKAFLGVNGISIEHGLTTPNMTEAHTN 194
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ AA R IV+ D SK PI
Sbjct: 195 -SLMVAAADRVIVLADHSKIGRVTLSRFAPI 224
>gi|325687039|gb|EGD29062.1| lactose PTS family porter repressor [Streptococcus sanguinis SK72]
Length = 266
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|315180552|gb|ADT87466.1| Transcriptional regulator of sugar metabolism [Vibrio furnissii
NCTC 11218]
Length = 259
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANG 46
+ +K A V DG TL + +GST + L A +AN
Sbjct: 75 NQD-IKSQLGAYAASLVEDGDTLILDSGSTTEHIAFHLTHKKQLKVMTNAINIAYHLANH 133
Query: 47 FRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++VI + +N+ + L + + L +DGFD+ G
Sbjct: 134 EDIEVIVTGGVMRKNSYSLHGESGEALLGQFRFNKLFLGVDGFDKSAGITTPHSGEANI- 192
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + AA I + D SK
Sbjct: 193 --NRSMVAAAQMVIAVADSSKF 212
>gi|291616386|ref|YP_003519128.1| SrlR [Pantoea ananatis LMG 20103]
gi|291151416|gb|ADD76000.1| SrlR [Pantoea ananatis LMG 20103]
Length = 269
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 26/139 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR+ A AIQ V DG +L + TGST + + L + V+ +S + N
Sbjct: 89 KRHIAESAIQLVNDGDSLILDTGSTVLQMVRHL----KPFNNITVMTNSLHIVNALMELD 144
Query: 67 IPLHSPEDVSSVD---------------------LSIDGFDEIDSRLRLIKGYGGALLRE 105
++ G D ID I +
Sbjct: 145 GDQTILMPGGTLRKKSASFHGGLAESAFRSFNFDKLFIGADGIDLD-MGITTFNEVHAVS 203
Query: 106 KIIAHAASRFIVIGDESKR 124
+ AA R IV+ D SK
Sbjct: 204 TSMCAAADRIIVLADSSKF 222
>gi|324995332|gb|EGC27244.1| lactose PTS family porter repressor [Streptococcus sanguinis SK678]
gi|327461630|gb|EGF07961.1| lactose PTS family porter repressor [Streptococcus sanguinis SK1]
gi|327473350|gb|EGF18770.1| lactose PTS family porter repressor [Streptococcus sanguinis SK408]
gi|327489487|gb|EGF21280.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1058]
Length = 248
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ + + DG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCVDLIADGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKIHH 66
K
Sbjct: 128 KLKERS 133
>gi|241889191|ref|ZP_04776494.1| lactose phosphotransferase system repressor [Gemella haemolysans
ATCC 10379]
gi|241864028|gb|EER68407.1| lactose phosphotransferase system repressor [Gemella haemolysans
ATCC 10379]
Length = 260
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ AR+ + D T+ +G GST L DK
Sbjct: 89 EEKKQIARKVADLIKDNETIFIGPGSTTSYLAEFLQDK 126
>gi|210630344|ref|ZP_03296407.1| hypothetical protein COLSTE_00291 [Collinsella stercoris DSM 13279]
gi|210160552|gb|EEA91523.1| hypothetical protein COLSTE_00291 [Collinsella stercoris DSM 13279]
Length = 263
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
Q KR AA+ A +YV G ++ MG GST + L +
Sbjct: 90 QQKREAAKLAARYVKPGDSIFMGGGSTLELMCEYLPTR 127
>gi|307701282|ref|ZP_07638303.1| transcriptional regulator, DeoR family [Mobiluncus mulieris
FB024-16]
gi|307613443|gb|EFN92691.1| transcriptional regulator, DeoR family [Mobiluncus mulieris
FB024-16]
Length = 303
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI 43
K+ AR A + V G +G+ G+T+ E +A ++
Sbjct: 121 KQRLARAAAKLVQPGDIIGVNGGTTSTEVAREIALRV 157
>gi|167770946|ref|ZP_02442999.1| hypothetical protein ANACOL_02300 [Anaerotruncus colihominis DSM
17241]
gi|167666986|gb|EDS11116.1| hypothetical protein ANACOL_02300 [Anaerotruncus colihominis DSM
17241]
Length = 255
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN---- 60
+ K+ A A++Y+ DG L + +G+T LA + + + V+ +
Sbjct: 79 EEKQRIALAALEYIHDGDKLMLDSGTTVL----ELAKLLKSKSHLTVVTNDIRIAAELQD 134
Query: 61 ----------------FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
FC + + +V D ID + L L
Sbjct: 135 IPDLSLLLIGGMIRKGFCSSYGFFAETMLGNITVSKLFFSVDAIDPEMGLKSYTMDDLNI 194
Query: 105 EKIIAHAASRFIVIGDESKRVD 126
+KI AS I++ D SK
Sbjct: 195 KKIGIANASERILLCDHSKFQS 216
>gi|117619768|ref|YP_857237.1| ribose-5-phosphate isomerase A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561175|gb|ABK38123.1| ribose-5-phosphate isomerase A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 39
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 196 GELCNI-PGVIEHGLFINM-VDCAIIGTSDGECL 227
+L I G + +GLF + D +IGT DG
Sbjct: 5 RQLNGIMVGTVTNGLFAHRGADVVLIGTPDGVIT 38
>gi|332071605|gb|EGI82098.1| bacterial regulatory s, deoR family protein [Streptococcus
pneumoniae GA17570]
Length = 202
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 6 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPYLSELDNLIIF 65
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 66 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 125
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 126 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 170
>gi|332071438|gb|EGI81932.1| bacterial regulatory s, deoR family protein [Streptococcus
pneumoniae GA41301]
Length = 197
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 1 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPYLSELDNLIIF 60
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 61 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 120
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 121 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 165
>gi|323484820|ref|ZP_08090176.1| hypothetical protein HMPREF9474_01927 [Clostridium symbiosum
WAL-14163]
gi|323401816|gb|EGA94158.1| hypothetical protein HMPREF9474_01927 [Clostridium symbiosum
WAL-14163]
Length = 259
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 24/150 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS---RNTENFCK 63
K AR A++ + DG ++ + +G+T L ++ ++ V+ ++ +T
Sbjct: 85 KTRIAREAVRLIKDGDSIFLDSGTTTLL----LGQQLEGIKKLTVVTNNLDIASTVKLDN 140
Query: 64 IHHIPLHSPEDVS-----------------SVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + VD++ G D ++S+ + + +K
Sbjct: 141 SSTMIVTGGVRRDGYSVLIGDIAEELVRKLYVDIAFVGADAVNSKSGVYNSNFMEIGIKK 200
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + R +++ D SK + IE
Sbjct: 201 SMIASGKRTVLLADHSKFKQKALAKICDIE 230
>gi|303255894|ref|ZP_07341927.1| putative fucose phosphotransferase system repressor [Streptococcus
pneumoniae BS455]
gi|303262117|ref|ZP_07348062.1| regulator of fucose operon [Streptococcus pneumoniae SP14-BS292]
gi|303266211|ref|ZP_07352103.1| regulator of fucose operon [Streptococcus pneumoniae BS457]
gi|303268890|ref|ZP_07354676.1| regulator of fucose operon [Streptococcus pneumoniae BS458]
gi|302597120|gb|EFL64233.1| putative fucose phosphotransferase system repressor [Streptococcus
pneumoniae BS455]
gi|302636757|gb|EFL67247.1| regulator of fucose operon [Streptococcus pneumoniae SP14-BS292]
gi|302641589|gb|EFL71950.1| regulator of fucose operon [Streptococcus pneumoniae BS458]
gi|302644259|gb|EFL74514.1| regulator of fucose operon [Streptococcus pneumoniae BS457]
Length = 257
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|296331542|ref|ZP_06874012.1| putative transcriptional regulator (DeoR family) protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675705|ref|YP_003867377.1| putative DeoR family transcriptional regulator [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151309|gb|EFG92188.1| putative transcriptional regulator (DeoR family) protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413949|gb|ADM39068.1| putative transcriptional regulator (DeoR family) protein [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 258
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 26/183 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD--------------KIANGFRVQVI 52
K+ A A +YV +G + + +TA +L D ++ N + VI
Sbjct: 79 KKAIAHEAAKYVKNGDRIILDASTTAWYMAKILPDIELTVITNSMKAAIELGNKENISVI 138
Query: 53 PSSRNTENFCKIHHIPLHSPE-DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ PL + V+ + D + L +K +
Sbjct: 139 STGGILLAKSLSFAGPLAERSLETYHVNKTFLSCKGFDINNGMSDSNEWQALLKKRMIER 198
Query: 112 ASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL 171
+ + I++ D SK + F +L + V + GL+ +
Sbjct: 199 SDQTILMADSSKWGNRE-----------FAHIASLQDISRVITDAGLDPVSVKAIEDRKV 247
Query: 172 FVS 174
V+
Sbjct: 248 KVT 250
>gi|168489236|ref|ZP_02713435.1| regulator of fucose operon [Streptococcus pneumoniae SP195]
gi|221232873|ref|YP_002512027.1| fucose phosphotransferase system repressor [Streptococcus
pneumoniae ATCC 700669]
gi|183572165|gb|EDT92693.1| regulator of fucose operon [Streptococcus pneumoniae SP195]
gi|220675335|emb|CAR69933.1| putative fucose phosphotransferase system repressor [Streptococcus
pneumoniae ATCC 700669]
gi|332198987|gb|EGJ13068.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA47901]
Length = 257
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|148984466|ref|ZP_01817754.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP3-BS71]
gi|147923243|gb|EDK74357.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP3-BS71]
gi|301800906|emb|CBW33565.1| putative fucose phosphotransferase system repressor [Streptococcus
pneumoniae OXC141]
Length = 251
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|15904015|ref|NP_359565.1| fucose operon repressor, putative [Streptococcus pneumoniae R6]
gi|116517134|ref|YP_817382.1| fucose operon repressor, putative [Streptococcus pneumoniae D39]
gi|148998030|ref|ZP_01825543.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP11-BS70]
gi|149006856|ref|ZP_01830537.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP18-BS74]
gi|149020080|ref|ZP_01835054.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP23-BS72]
gi|168576039|ref|ZP_02721944.1| regulator of fucose operon [Streptococcus pneumoniae MLV-016]
gi|194396661|ref|YP_002038759.1| DeoR family fucose operon regulator [Streptococcus pneumoniae G54]
gi|225861986|ref|YP_002743495.1| regulator of fucose operon [Streptococcus pneumoniae Taiwan19F-14]
gi|298229400|ref|ZP_06963081.1| regulator of fucose operon [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255596|ref|ZP_06979182.1| regulator of fucose operon [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298501673|ref|YP_003723613.1| DeoR family transcriptional regulator [Streptococcus pneumoniae
TCH8431/19A]
gi|307068784|ref|YP_003877750.1| sugar metabolism transcriptional regulator [Streptococcus
pneumoniae AP200]
gi|307128432|ref|YP_003880463.1| regulator of fucose operon [Streptococcus pneumoniae 670-6B]
gi|15459676|gb|AAL00776.1| Regulator of fucose operon [Streptococcus pneumoniae R6]
gi|116077710|gb|ABJ55430.1| fucose operon repressor, putative [Streptococcus pneumoniae D39]
gi|147756040|gb|EDK63083.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP11-BS70]
gi|147761457|gb|EDK68422.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP18-BS74]
gi|147930758|gb|EDK81739.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP23-BS72]
gi|183578096|gb|EDT98624.1| regulator of fucose operon [Streptococcus pneumoniae MLV-016]
gi|194356328|gb|ACF54776.1| fucose operon regulator, DeoR family [Streptococcus pneumoniae G54]
gi|225728281|gb|ACO24132.1| regulator of fucose operon [Streptococcus pneumoniae Taiwan19F-14]
gi|298237268|gb|ADI68399.1| DeoR family transcriptional regulator [Streptococcus pneumoniae
TCH8431/19A]
gi|301795084|emb|CBW37553.1| putative fucose phosphotransferase system repressor [Streptococcus
pneumoniae INV104]
gi|306410321|gb|ADM85748.1| Transcriptional regulators of sugar metabolism [Streptococcus
pneumoniae AP200]
gi|306485494|gb|ADM92363.1| regulator of fucose operon [Streptococcus pneumoniae 670-6B]
gi|327388907|gb|EGE87255.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA04375]
gi|332071245|gb|EGI81740.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA17545]
Length = 257
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|15901978|ref|NP_346582.1| fucose operon repressor, putative [Streptococcus pneumoniae TIGR4]
gi|111658280|ref|ZP_01408971.1| hypothetical protein SpneT_02000549 [Streptococcus pneumoniae
TIGR4]
gi|148988808|ref|ZP_01820223.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP6-BS73]
gi|148991980|ref|ZP_01821754.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP9-BS68]
gi|149012032|ref|ZP_01833180.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP19-BS75]
gi|182685106|ref|YP_001836853.1| fucose operon repressor, putative [Streptococcus pneumoniae CGSP14]
gi|14973680|gb|AAK76222.1| putative fucose operon repressor [Streptococcus pneumoniae TIGR4]
gi|147763987|gb|EDK70920.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP19-BS75]
gi|147925619|gb|EDK76695.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP6-BS73]
gi|147929029|gb|EDK80040.1| fucose operon repressor, putative [Streptococcus pneumoniae
SP9-BS68]
gi|182630440|gb|ACB91388.1| fucose operon repressor, putative [Streptococcus pneumoniae CGSP14]
gi|301802834|emb|CBW35612.1| putative fucose phosphotransferase system repressor [Streptococcus
pneumoniae INV200]
Length = 257
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|293376515|ref|ZP_06622743.1| transcriptional regulator, DeoR family [Turicibacter sanguinis
PC909]
gi|325845472|ref|ZP_08168763.1| transcriptional regulator, DeoR family [Turicibacter sp. HGF1]
gi|292644741|gb|EFF62823.1| transcriptional regulator, DeoR family [Turicibacter sanguinis
PC909]
gi|325488491|gb|EGC90909.1| transcriptional regulator, DeoR family [Turicibacter sp. HGF1]
Length = 248
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A+ A V DG ++ + +G+T E + LA G ++ V+ + + +
Sbjct: 79 KDAIAKYAAALVEDGDSIYIDSGTTTFEMIKYLA-----GKKIMVVTNGLSNVESLIEYD 133
Query: 67 IPLHSP 72
IP
Sbjct: 134 IPCFVL 139
>gi|300990667|ref|ZP_07179266.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|300407088|gb|EFJ90626.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
Length = 170
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
MKR+ A+ A++ + G + + +G+T +A + V + + N
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMN 139
>gi|229005955|ref|ZP_04163647.1| Fructose repressor [Bacillus mycoides Rock1-4]
gi|228755292|gb|EEM04645.1| Fructose repressor [Bacillus mycoides Rock1-4]
Length = 249
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A +V G + + GST E + L +K + N R
Sbjct: 77 QVKKQIAKHAASFVAKGDCIYLDAGSTTFEMIPYLIEKEVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +K
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQQY-RFDKCFLGANGVHEQLGYTTPDPEEALLKKRAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + IE
Sbjct: 196 TLANEGYFLIDESKFSEVAFAKIASIE 222
>gi|325972250|ref|YP_004248441.1| DeoR family transcriptional regulator [Spirochaeta sp. Buddy]
gi|324027488|gb|ADY14247.1| transcriptional regulator, DeoR family [Spirochaeta sp. Buddy]
Length = 251
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KRN AR A V T+ + +GSTA E + L D + ++ SS + N C
Sbjct: 75 EEKRNIARLAATLVETETTIALDSGSTALELVKCLVDIPQ----LTIVTSSIHIMNLCLS 130
Query: 65 HH-----IPLHSPEDVS---------------SVDLSIDGFDEIDSRLRLIKGYGGALLR 104
H +P VD G IDS+ + + +
Sbjct: 131 HPNIQILVPPGHLRPHEGSIVGSETVEFLRTIHVDQFFMGVGGIDSKAGVTEYNMDDIAV 190
Query: 105 EKIIAHAASRFIVIGDESKR 124
+K +A A + IV+ D SK
Sbjct: 191 KKALAANAKQLIVLADASKF 210
>gi|160933965|ref|ZP_02081352.1| hypothetical protein CLOLEP_02827 [Clostridium leptum DSM 753]
gi|156866638|gb|EDO60010.1| hypothetical protein CLOLEP_02827 [Clostridium leptum DSM 753]
Length = 255
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTE 59
+ K+ AA A+ ++ D MT+ + + ST LA + NG + + +
Sbjct: 77 EKKKIAAGLALDFLEDNMTVMLDSSSTVTCLAAQLARFKNLSVVTNGIETAGVLNENTSF 136
Query: 60 NFCKIHHIPLHSPEDVSSV----------DLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ ++ V S+ D+ I + + + +K++
Sbjct: 137 KIYLCGGLIQNNSSMVGSLAQETLEHFHTDILFFSCCGISAPDLVTEANEETAAMKKLML 196
Query: 110 HAASRFIVIGDESKR 124
A + I++ D +K
Sbjct: 197 RNAKKKILLCDSTKM 211
>gi|299536653|ref|ZP_07049965.1| transcriptional regulator, DeoR family protein [Lysinibacillus
fusiformis ZC1]
gi|298728137|gb|EFI68700.1| transcriptional regulator, DeoR family protein [Lysinibacillus
fusiformis ZC1]
Length = 263
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
KR + A V DG + +G G+TA E + L DK
Sbjct: 80 KRRICKAAASIVEDGDVIFIGHGTTAYEIVRYLGDK 115
>gi|294143101|ref|YP_003559079.1| DeoR family transcriptional regulator [Shewanella violacea DSS12]
gi|293329570|dbj|BAJ04301.1| transcriptional regulator, DeoR family [Shewanella violacea DSS12]
Length = 256
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 45/150 (30%), Gaps = 28/150 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+N A+ A + + D + + +GST + L + G V + H
Sbjct: 78 KQNIAKAAARLIKDHNRIIIDSGSTTSGLVQELGN--KRGLVVMTNALQLASAIHELEHE 135
Query: 67 ----------------------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + + + DG D + G +
Sbjct: 136 PTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDIERGTTTFNELTGLS--- 192
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
K++A + IV+ + K + LP
Sbjct: 193 -KVMAEVSREVIVMLESDKIGRRIPNLELP 221
>gi|169833948|ref|YP_001695523.1| regulator of fucose operon [Streptococcus pneumoniae Hungary19A-6]
gi|168996450|gb|ACA37062.1| regulator of fucose operon [Streptococcus pneumoniae Hungary19A-6]
Length = 257
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCVYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|168484007|ref|ZP_02708959.1| regulator of fucose operon [Streptococcus pneumoniae CDC1873-00]
gi|168491697|ref|ZP_02715840.1| regulator of fucose operon [Streptococcus pneumoniae CDC0288-04]
gi|168494076|ref|ZP_02718219.1| regulator of fucose operon [Streptococcus pneumoniae CDC3059-06]
gi|225855661|ref|YP_002737173.1| regulator of fucose operon [Streptococcus pneumoniae JJA]
gi|225857735|ref|YP_002739246.1| regulator of fucose operon [Streptococcus pneumoniae P1031]
gi|225859940|ref|YP_002741450.1| regulator of fucose operon [Streptococcus pneumoniae 70585]
gi|172042651|gb|EDT50697.1| regulator of fucose operon [Streptococcus pneumoniae CDC1873-00]
gi|183574099|gb|EDT94627.1| regulator of fucose operon [Streptococcus pneumoniae CDC0288-04]
gi|183575996|gb|EDT96524.1| regulator of fucose operon [Streptococcus pneumoniae CDC3059-06]
gi|225722106|gb|ACO17960.1| regulator of fucose operon [Streptococcus pneumoniae 70585]
gi|225723655|gb|ACO19508.1| regulator of fucose operon [Streptococcus pneumoniae JJA]
gi|225724873|gb|ACO20725.1| regulator of fucose operon [Streptococcus pneumoniae P1031]
gi|332198785|gb|EGJ12867.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA47368]
Length = 257
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCVYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|271962712|ref|YP_003336908.1| DeoR family transcriptional regulator [Streptosporangium roseum DSM
43021]
gi|270505887|gb|ACZ84165.1| transcriptional regulator, DeoR family [Streptosporangium roseum
DSM 43021]
Length = 256
Score = 42.9 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 22/150 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------------IAN 45
K+ A A V G +GM G+T E LA + +
Sbjct: 78 KQRIAEAAAGLVTPGAIVGMNGGTTTSEVARALATRADPEIGFTIVTNALNIAAELTVRR 137
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
++ + +++ I + E V+ +D++ G D ID+ + G
Sbjct: 138 HVKIVLTGGVARPQSYELIGPLASGVLEQVT-LDIAFLGVDGIDAEAGASAHHEGEASVN 196
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
++ A++ +V+ D SK + P+
Sbjct: 197 NLLISRAAQVVVVADTSKIGRRAFARICPL 226
>gi|225573405|ref|ZP_03782160.1| hypothetical protein RUMHYD_01597 [Blautia hydrogenotrophica DSM
10507]
gi|225039215|gb|EEG49461.1| hypothetical protein RUMHYD_01597 [Blautia hydrogenotrophica DSM
10507]
Length = 257
Score = 42.6 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ 50
+KR AA++A++YV DG + + G+T LA + + V
Sbjct: 82 DLKREAAKKAVRYVKDGTLIALNAGTTNTILAQELALRNEHFTVVT 127
>gi|270295519|ref|ZP_06201720.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274766|gb|EFA20627.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 253
Score = 42.6 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 22/141 (15%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL-------------------LADK 42
+ ++ KR AR+A+ ++ +G + + +GST E L L +
Sbjct: 74 NHIEEKREIARKAVSFIREGECIILDSGSTTTEIAKLLTQYKELTVITNALNIALILGEN 133
Query: 43 IANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
V T + + + L+ G I + L L
Sbjct: 134 PGITLIVTGGEFKAPTLSLTGKMAADSLKGFHANKLFLATAG---ISPDMSLTYPSLSDL 190
Query: 103 LREKIIAHAASRFIVIGDESK 123
+ + + AA I++ D SK
Sbjct: 191 MVKSAMIKAAEEVILVADSSK 211
>gi|313496400|gb|ADR57766.1| DeoR family transcriptional regulator [Pseudomonas putida BIRD-1]
Length = 258
Score = 42.6 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRV------------ 49
K+ AR A+ + + + + +GST + L + + N V
Sbjct: 78 KKAIARAAVGRIREHARIIIDSGSTTAAMIPELGRQPGLVVMTNSLNVARAICDLEHEPV 137
Query: 50 ---QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLGRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A IV+ + K + LP
Sbjct: 194 VMAEVAREVIVMVESDKVGRKIPNLELP 221
>gi|167036414|ref|YP_001671645.1| DeoR family transcriptional regulator [Pseudomonas putida GB-1]
gi|166862902|gb|ABZ01310.1| transcriptional regulator, DeoR family [Pseudomonas putida GB-1]
Length = 258
Score = 42.6 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRV------------ 49
K+ AR A+ + + + + +GST + L + + N V
Sbjct: 78 KKAIARAAVGRIREHARIIIDSGSTTAAMIPELGRQPGLVVMTNSLNVARAICDLEHEPV 137
Query: 50 ---QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLGRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A IV+ + K + LP
Sbjct: 194 VMAEVAREVIVMVESDKVGRKIPNLELP 221
>gi|325697117|gb|EGD39004.1| lactose PTS family porter repressor [Streptococcus sanguinis SK160]
Length = 248
Score = 42.6 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ + DG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIADGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKIHH 66
K
Sbjct: 128 KLKERP 133
>gi|26992085|ref|NP_747510.1| DeoR family transcriptional regulator [Pseudomonas putida KT2440]
gi|148550492|ref|YP_001270594.1| DeoR family transcriptional regulator [Pseudomonas putida F1]
gi|24987227|gb|AAN70974.1|AE016742_3 transcriptional regulator, DeoR family [Pseudomonas putida KT2440]
gi|148514550|gb|ABQ81410.1| transcriptional regulator, DeoR family [Pseudomonas putida F1]
Length = 258
Score = 42.6 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRV------------ 49
K+ AR A+ + + + + +GST + L + + N V
Sbjct: 78 KKAIARAAVGRIREHARIIIDSGSTTAAMIPELGRQPGLVVMTNSLNVARAICDLEHEPV 137
Query: 50 ---QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLGRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A IV+ + K + LP
Sbjct: 194 VMAEVAREVIVMVESDKVGRKIPNLELP 221
>gi|328477155|gb|EGF47379.1| transcription regulator [Lactobacillus rhamnosus MTCC 5462]
Length = 132
Score = 42.6 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 24/59 (40%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A+RA+ Y+ DG T+ + +G+++ E + + + +
Sbjct: 34 AKQKMAQRALSYIKDGSTIFLDSGTSSYELAEAIKQNPRHDLSIITSSTFVAQTMLVMQ 92
>gi|312870837|ref|ZP_07730942.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
3008A-a]
gi|325912485|ref|ZP_08174876.1| transcriptional regulator, DeoR family [Lactobacillus iners UPII
60-B]
gi|311093527|gb|EFQ51866.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
3008A-a]
gi|325478219|gb|EGC81340.1| transcriptional regulator, DeoR family [Lactobacillus iners UPII
60-B]
Length = 252
Score = 42.6 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A++A + + DG T+ +G G+T + + L K
Sbjct: 80 KKEVAKKASKLIKDGETVYVGPGTTLEFMVAELKQK 115
>gi|327474603|gb|EGF20008.1| lactose PTS family porter repressor [Streptococcus sanguinis SK408]
Length = 251
Score = 42.6 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|327460889|gb|EGF07222.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1057]
Length = 251
Score = 42.6 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|324993729|gb|EGC25648.1| lactose PTS family porter repressor [Streptococcus sanguinis SK405]
gi|332367243|gb|EGJ44978.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1059]
Length = 251
Score = 42.6 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|323351088|ref|ZP_08086745.1| lactose PTS family porter repressor [Streptococcus sanguinis VMC66]
gi|322122812|gb|EFX94521.1| lactose PTS family porter repressor [Streptococcus sanguinis VMC66]
gi|325695006|gb|EGD36910.1| lactose PTS family porter repressor [Streptococcus sanguinis SK150]
gi|327490161|gb|EGF21949.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1058]
Length = 251
Score = 42.6 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|302872753|ref|YP_003841389.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
obsidiansis OB47]
gi|302575612|gb|ADL43403.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
obsidiansis OB47]
Length = 253
Score = 42.6 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP----------S 54
Q K A A+ + +GM + + TG+T +A K+ + + VI +
Sbjct: 77 QEKERIALEALNRIKEGMVVILDTGTTT----QQIARKLKSFQHITVITNGINIVNELIT 132
Query: 55 SRNTENFCKIHHIPLHSPEDVSS------VDLSIDGFDEIDSRLRLIKGYGGALLRE--- 105
+ + F + + V + S D S + L KG + + E
Sbjct: 133 NNSINLFLVGGKVKNSNFSTVGPEAQKAFLQFSADIAFIGTSGISLEKGLTTSDVFEAEV 192
Query: 106 -KIIAHAASRFIVIGDESKRVD 126
+ + ++ IV+ D SK
Sbjct: 193 KRAMIDSSKEVIVVADSSKFKK 214
>gi|293392226|ref|ZP_06636560.1| DeoR family transcriptional regulator [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952760|gb|EFE02879.1| DeoR family transcriptional regulator [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 252
Score = 42.6 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 17/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD---------------KIANGFRVQV 51
K A+ A + +G T+ + +GST L +++ + +
Sbjct: 79 KIRIAKAAAGLIKEGDTIILDSGSTTMMIANELLKIKNITVITNNLPAAFVLSDSVDITL 138
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVS-SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + + H + D+ G D ID + + + I+A
Sbjct: 139 VICGGYVRHKTRSMHGTIAEHTLNGIRADIMFVGADGIDP-INGLTTFNEGYHISSIMAK 197
Query: 111 AASRFIVIGDESKRVDFLGRGMLP 134
A+S+ + + D +K +LP
Sbjct: 198 ASSKVVCVADSTKFNRNGFNQVLP 221
>gi|330686250|gb|EGG97862.1| transcriptional regulator, DeoR family [Staphylococcus epidermidis
VCU121]
Length = 256
Score = 42.6 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 21/147 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--PSSRN-- 57
K +A ++V DG TL + +GST F L K I N + I S+
Sbjct: 80 KLGIGYKAAEFVEDGDTLIIDSGSTTLLFAKALLHKQHLTIITNDIHIASILRSSNHKVI 139
Query: 58 -TENFCKIHHIPLHSPEDVSSVD--------LSIDGFDEIDSRLRLIKGYGGALLREKII 108
T ++ L+ ++ L+ D I + + A ++ +
Sbjct: 140 VTGGTLYHNNYVLNGLITTQTLQSFNSMKAFLATPAIDAIKGVTHYSEEFVDA---KRQM 196
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPI 135
+ + ++ D SK + PI
Sbjct: 197 VNQSKEVYMLTDSSKLNKIAFYQVCPI 223
>gi|289177495|gb|ADC84741.1| Transcriptional regulator, DeoR family [Bifidobacterium animalis
subsp. lactis BB-12]
Length = 289
Score = 42.6 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRV 49
+K A AI++V G + +G G+TA F L + ANG +
Sbjct: 100 LKDAIAGEAIKFVSPGDVIAIGGGTTAYVFAQHLLESPNANGITI 144
>gi|313903020|ref|ZP_07836415.1| transcriptional regulator, DeoR family [Thermaerobacter
subterraneus DSM 13965]
gi|313466744|gb|EFR62263.1| transcriptional regulator, DeoR family [Thermaerobacter
subterraneus DSM 13965]
Length = 253
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 39/139 (28%), Gaps = 18/139 (12%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT---- 58
+ K+ A A+ + DG + + GST + L V T
Sbjct: 75 QAEEKQRIAAAAVSMINDGDVIALNAGSTTA-AIARLLTTRREITVVTNSLPVIRTLAGN 133
Query: 59 ---ENFCKIHHIPLHSPEDVSSVDL----------SIDGFDEIDSRLRLIKGYGGALLRE 105
+ S V + L + G D I + +
Sbjct: 134 PDIRMLIVGGQLRNRSLALVGPLALQNLADLFVDKAFLGVDGISVEHGITTPNLDEAVVN 193
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A + IV+ D +K
Sbjct: 194 RTMLRRARKVIVVADHTKF 212
>gi|219683049|ref|YP_002469432.1| DeoR-type transcriptional regulator [Bifidobacterium animalis
subsp. lactis AD011]
gi|241191370|ref|YP_002968764.1| DeoR-type transcriptional regulator [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196776|ref|YP_002970331.1| DeoR-type transcriptional regulator [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|219620699|gb|ACL28856.1| probable DeoR-type transcriptional regulator [Bifidobacterium
animalis subsp. lactis AD011]
gi|240249762|gb|ACS46702.1| DeoR-type transcriptional regulator [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251330|gb|ACS48269.1| DeoR-type transcriptional regulator [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295794363|gb|ADG33898.1| DeoR-type transcriptional regulator [Bifidobacterium animalis
subsp. lactis V9]
Length = 273
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRV 49
+K A AI++V G + +G G+TA F L + ANG +
Sbjct: 84 LKDAIAGEAIKFVSPGDVIAIGGGTTAYVFAQHLLESPNANGITI 128
>gi|183602138|ref|ZP_02963506.1| probable DeoR-type transcriptional regulator [Bifidobacterium
animalis subsp. lactis HN019]
gi|183218631|gb|EDT89274.1| probable DeoR-type transcriptional regulator [Bifidobacterium
animalis subsp. lactis HN019]
Length = 267
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRV 49
+K A AI++V G + +G G+TA F L + ANG +
Sbjct: 78 LKDAIAGEAIKFVSPGDVIAIGGGTTAYVFAQHLLESPNANGITI 122
>gi|157371809|ref|YP_001479798.1| DNA-binding transcriptional repressor SrlR [Serratia proteamaculans
568]
gi|157323573|gb|ABV42670.1| transcriptional regulator, DeoR family [Serratia proteamaculans
568]
Length = 257
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIANGF------ 47
+ KR A AI+ + DG +L GST + + LA I N
Sbjct: 76 EKKRQIAYAAIKLINDGDSLIFDAGSTVLQMVPHLAQFNNITVMTNSLHIVNALVELDND 135
Query: 48 ---RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + + +F + + DG D + +
Sbjct: 136 QTILMPGGTYRKKSASFHGSLAESAFQQFSFDKLFIGADGVDL----NAGVTTFNEVHNV 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
K + AASR I++ D SK
Sbjct: 192 SKAMCEAASRIILLVDSSKF 211
>gi|298250954|ref|ZP_06974758.1| transcriptional regulator, DeoR family [Ktedonobacter racemifer DSM
44963]
gi|297548958|gb|EFH82825.1| transcriptional regulator, DeoR family [Ktedonobacter racemifer DSM
44963]
Length = 259
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 18/148 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRV 49
+ K+ R A + DG T+ +G+G+T E L A ++A +
Sbjct: 83 EEKQLIGRAAASLIKDGETIFLGSGTTTLEVARALEGKKNLTVITNALNVAYQLAGNENI 142
Query: 50 QVIPSS--RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+I + F I HI + +D+ D +I I L + +++
Sbjct: 143 TLIITGGVVRHSEFSMIGHIVEQTLKDL-RADKAIISMRAISLHDGLTNMNPLETMTDRV 201
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPI 135
I A I++ D +K + P+
Sbjct: 202 IVQCAREVILVADHTKFGKVATSIVAPL 229
>gi|239637762|ref|ZP_04678729.1| galactitol utilization operon repressor [Staphylococcus warneri
L37603]
gi|239596664|gb|EEQ79194.1| galactitol utilization operon repressor [Staphylococcus warneri
L37603]
Length = 256
Score = 42.6 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 21/147 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--PSSRN-- 57
K +A ++V DG TL + +GST F L K I N + I S+
Sbjct: 80 KLGIGYKAAEFVEDGDTLIIDSGSTTLLFAKALLHKQHLTIITNDIHIASILRSSNHKVI 139
Query: 58 -TENFCKIHHIPLHSPEDVSSVD--------LSIDGFDEIDSRLRLIKGYGGALLREKII 108
T ++ L+ ++ L+ D I + + A ++ +
Sbjct: 140 VTGGTLYHNNYVLNGLITTQTLQSFNSMKAFLATPAIDAIKGVTHYSEEFVDA---KRQM 196
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPI 135
+ + ++ D SK + PI
Sbjct: 197 VNQSKEVYMLTDSSKLNKIAFYQVCPI 223
>gi|332359051|gb|EGJ36872.1| lactose PTS family porter repressor [Streptococcus sanguinis SK49]
Length = 251
Score = 42.6 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|239833875|ref|ZP_04682203.1| DeoR family transcriptional regulator [Ochrobactrum intermedium LMG
3301]
gi|239821938|gb|EEQ93507.1| DeoR family transcriptional regulator [Ochrobactrum intermedium LMG
3301]
Length = 274
Score = 42.6 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
KR AR A+ +G ++ + GST + + LA + IA Q +
Sbjct: 83 KRAIAREAVALCEEGDSIIINGGSTTFQMVHYLAPRRLQVLTNSFAIAEHLLRQSKSTVI 142
Query: 57 NTENFCKIHHIPLHSPEDVSSV-DLS----IDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ SP D + + G I L +++ + E+ +
Sbjct: 143 VPGGAIYRDQSLILSPFDNDVIRNFYGRRMFMGCQGISP-LGVMESDALIIQSEQKLMGQ 201
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
A +++ D +K + P+
Sbjct: 202 ADELVLMVDSTKFTRRSSLILCPL 225
>gi|325690675|gb|EGD32676.1| lactose PTS family porter repressor [Streptococcus sanguinis SK115]
Length = 251
Score = 42.6 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|283786746|ref|YP_003366611.1| glucitol operon repressor [Citrobacter rodentium ICC168]
gi|282950200|emb|CBG89836.1| glucitol operon repressor [Citrobacter rodentium ICC168]
Length = 257
Score = 42.6 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 46/151 (30%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A A++++ DG ++ + GST + L++
Sbjct: 77 KKARIAEAAVRFIYDGDSIILDAGSTVLQMVPMLSRFSNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFAQFSFDKLFMGTDGIDLDAG----VTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|160891343|ref|ZP_02072346.1| hypothetical protein BACUNI_03792 [Bacteroides uniformis ATCC 8492]
gi|156858750|gb|EDO52181.1| hypothetical protein BACUNI_03792 [Bacteroides uniformis ATCC 8492]
Length = 253
Score = 42.6 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 22/138 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL-------------------LADKIAN 45
+ KR A++A ++ +G + + +GST E L L +
Sbjct: 77 EEKREIAQKAASFISEGECIILDSGSTTTEIAKLLTQYKELTVITNALNIALILGENPGI 136
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
V T + + + L+ G I + L L+ +
Sbjct: 137 NLIVTGGEFKAPTLSLTGKMAADSLKGFHANKLFLATAG---ISPDMSLTYPSLSDLMVK 193
Query: 106 KIIAHAASRFIVIGDESK 123
+ AA I++ D SK
Sbjct: 194 SAMIKAAEEVILVADSSK 211
>gi|126652510|ref|ZP_01724675.1| lactose phosphotransferase system repressor [Bacillus sp. B14905]
gi|126590638|gb|EAZ84754.1| lactose phosphotransferase system repressor [Bacillus sp. B14905]
Length = 260
Score = 42.6 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR AR A + + DG T+ + TG+T L
Sbjct: 77 QKEAKRQIARMAAKRISDGDTIAIDTGTTTVHIADFL 113
>gi|296138724|ref|YP_003645967.1| DeoR family transcriptional regulator [Tsukamurella paurometabola
DSM 20162]
gi|296026858|gb|ADG77628.1| transcriptional regulator, DeoR family [Tsukamurella paurometabola
DSM 20162]
Length = 264
Score = 42.6 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR A+ V DGMT+ +G G+T LA + G + V+ +S + +
Sbjct: 83 KTAIARAALALVEDGMTVAIGAGTTTL----ELARLLR-GRAIAVVTNSISLFHVMTDPA 137
Query: 67 IPLHSPEDVS 76
L + V
Sbjct: 138 DDLVAGGAVQ 147
>gi|239636196|ref|ZP_04677200.1| lactose phosphotransferase system repressor [Staphylococcus warneri
L37603]
gi|239598212|gb|EEQ80705.1| lactose phosphotransferase system repressor [Staphylococcus warneri
L37603]
Length = 251
Score = 42.6 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
++ KR A++AI + DG TL +G G+T + +
Sbjct: 76 QMEEKRYIAKKAISLIEDGDTLFLGPGTTVEILAEEI 112
>gi|153010892|ref|YP_001372106.1| DeoR family transcriptional regulator [Ochrobactrum anthropi ATCC
49188]
gi|151562780|gb|ABS16277.1| transcriptional regulator, DeoR family [Ochrobactrum anthropi ATCC
49188]
Length = 274
Score = 42.6 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
KR AR A+ +G ++ + GST + + LA + IA Q +
Sbjct: 83 KRAIAREAVALCEEGDSIIINGGSTTFQMVHYLAPRRLQVLTNSFAIAEHLLRQSKSTVI 142
Query: 57 NTENFCKIHHIPLHSPEDVSSV-DLS----IDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ SP D + + G I L +++ + E+ +
Sbjct: 143 VPGGAIYRDQSLILSPFDNDVIRNFYGRRMFMGCQGISP-LGVMESDALIIQSEQKLMGQ 201
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
A +++ D +K + P+
Sbjct: 202 ADELVLMVDSTKFTRRSSLILCPL 225
>gi|223982488|ref|ZP_03632727.1| hypothetical protein HOLDEFILI_00001 [Holdemania filiformis DSM
12042]
gi|223965513|gb|EEF69786.1| hypothetical protein HOLDEFILI_00001 [Holdemania filiformis DSM
12042]
Length = 239
Score = 42.6 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 21/144 (14%)
Query: 1 MDA-----LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
M+A +Q K A+ A + D + + G+T + + + K Q +
Sbjct: 53 MNAKHLVNMQKKAVIAKYAASLIQDNDIVYLDAGTTTEMMIDYIHAKNI-LVVTQALSIL 111
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIK--GYGGAL----------- 102
+ + +++ + D +++ + I G G
Sbjct: 112 DRLYERQIRCYTLGGYIKFSTNIIVDNDTIEKMAAMNFNISFLGCNGIHSLVGFSTTNEI 171
Query: 103 --LREKIIAHAASRFIVIGDESKR 124
+ +K+I ++ D SK
Sbjct: 172 EAMLKKMIISRTKSAYILADSSKF 195
>gi|116694274|ref|YP_728485.1| DeoR family transcriptional regulator [Ralstonia eutropha H16]
gi|113528773|emb|CAJ95120.1| transcriptional regulator, DeoR-family [Ralstonia eutropha H16]
Length = 259
Score = 42.6 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 20/151 (13%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------------IAN 45
+ K AR A +V DG + + +G+TA L +
Sbjct: 78 QREQKEAIARLAASFVQDGDAVLLDSGTTAAALARQLGAREDLHVYTTNLLAVTALTGLP 137
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD-EIDSRLRLIKGYGGALLR 104
G RV +I + + + + SVD + G D + A L+
Sbjct: 138 GIRVTLIGGDVRPSSMGTFGPLAQVTLSRI-SVDKAFLGADGVVAGVGLCEASAEQAYLK 196
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
E I+ AA F+ + D +K + P+
Sbjct: 197 ECIVRQAADIFV-LADATKLGRAQQQHWTPL 226
>gi|70733496|ref|YP_263271.1| DeoR family transcriptional regulator [Pseudomonas fluorescens
Pf-5]
gi|68347795|gb|AAY95401.1| transcriptional regulator, DeoR family [Pseudomonas fluorescens
Pf-5]
Length = 255
Score = 42.6 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 28/150 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN--------- 57
K+ AR A+Q + + + + +GST + L + G V +
Sbjct: 78 KQAIARAAVQRIREHARIIIDSGSTTAAMIPELG--LQPGLVVMTNSLNVANALSELEHE 135
Query: 58 -------------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+E+F + D + + DG D L
Sbjct: 136 PVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLARGTTTF----NELLGL 191
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 192 SRVMAEVAREVVVMVESDKIGRKIPNLELP 221
>gi|209518147|ref|ZP_03266976.1| transcriptional regulator, DeoR family [Burkholderia sp. H160]
gi|209501451|gb|EEA01478.1| transcriptional regulator, DeoR family [Burkholderia sp. H160]
Length = 251
Score = 42.6 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 16/135 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--RVQVIPSSRNTENF-- 61
KR ARRA++ + G T+ + G+T+ + L + + ++
Sbjct: 76 AKRRIARRAVEMIEPGQTVIIDGGTTSALLVRELPSDLHATIVTHSPSVATALAAHPCVD 135
Query: 62 ----------CKIHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I + + E ++ + L G + L G ++ +A
Sbjct: 136 VILIGGRLYKHSIVAVGAAAMEGIARIHADLYFMGVTGVHPSAGLTTGDFEEAAIKRALA 195
Query: 110 HAASRFIVIGDESKR 124
A+ +V+ SK
Sbjct: 196 ARAAETVVLASSSKL 210
>gi|329577300|gb|EGG58760.1| transcriptional regulator, DeoR family [Enterococcus faecalis
TX1467]
Length = 250
Score = 42.6 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV 51
+ KR A++A++ + +G T+ +G G+T LA++I N +
Sbjct: 78 EEKRQIAKKAVEIIEEGDTIFLGPGTTV----EALAEEIHNKKLTVI 120
>gi|327458715|gb|EGF05063.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1057]
Length = 248
Score = 42.6 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ +VDG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIVDGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKI 64
K
Sbjct: 128 KLKE 131
>gi|324993357|gb|EGC25277.1| lactose PTS family porter repressor [Streptococcus sanguinis SK405]
gi|325690148|gb|EGD32152.1| lactose PTS family porter repressor [Streptococcus sanguinis SK115]
gi|325694066|gb|EGD35984.1| lactose PTS family porter repressor [Streptococcus sanguinis SK150]
Length = 248
Score = 42.6 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ +VDG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIVDGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKI 64
K
Sbjct: 128 KLKE 131
>gi|125717560|ref|YP_001034693.1| lactose phosphotransferase system transcriptional repressor
[Streptococcus sanguinis SK36]
gi|125497477|gb|ABN44143.1| Lactose phosphotransferase system transcriptional repressor,
putative [Streptococcus sanguinis SK36]
gi|325688269|gb|EGD30288.1| lactose PTS family porter repressor [Streptococcus sanguinis SK72]
gi|328945531|gb|EGG39682.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1087]
gi|332361714|gb|EGJ39518.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1056]
Length = 248
Score = 42.6 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ + DG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIADGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKIHH 66
K
Sbjct: 128 KLKERS 133
>gi|308186840|ref|YP_003930971.1| hypothetical protein Pvag_1332 [Pantoea vagans C9-1]
gi|308057350|gb|ADO09522.1| Uncharacterized HTH-type transcriptional regulator yihW [Pantoea
vagans C9-1]
Length = 249
Score = 42.2 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 26/162 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGF 47
K+ A++A+ + G + + G+T+ E + L A +A+
Sbjct: 73 QTASKQAIAQKAVSLIQPGQIVLIDGGTTSAELVRQLPATLSFTAVTHSPSVALALADHP 132
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGALLRE 105
V++I + + E ++ ++ L G + L G +
Sbjct: 133 LVEIILVGGQLYK-HSVVTVGAAMLESINRINADLFFMGVTGVHPAAGLTTGNFEEATVK 191
Query: 106 KIIAHAASRFIVIGDESKR--------VDFLGRGMLPIEIDQ 139
+ +A A+ +V+ K D L +E
Sbjct: 192 RALAGRAAETVVLASAEKLNSASAFAIGDLSLASTLVVETQP 233
>gi|327463000|gb|EGF09321.1| lactose PTS family porter repressor [Streptococcus sanguinis SK1]
Length = 251
Score = 42.2 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 50/152 (32%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEITNQHLRVITNCLPIFHDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|293402012|ref|ZP_06646152.1| transcriptional regulator [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304670|gb|EFE45919.1| transcriptional regulator [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 250
Score = 42.2 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV 51
K+ A+ A+ Y+ D + + GST L ++ G V
Sbjct: 80 KQLIAKAALSYIRDNSIIFLDPGSTTLYLSKYL--RLKKGLTVVT 122
>gi|256018952|ref|ZP_05432817.1| DNA-binding transcriptional regulator AgaR [Shigella sp. D9]
gi|260857257|ref|YP_003231148.1| DNA-binding transcriptional dual regulator AgaR [Escherichia coli
O26:H11 str. 11368]
gi|260869882|ref|YP_003236284.1| DNA-binding transcriptional dual regulator AgaR [Escherichia coli
O111:H- str. 11128]
gi|332280042|ref|ZP_08392455.1| DNA-binding transcriptional dual regulator [Shigella sp. D9]
gi|257755906|dbj|BAI27408.1| DNA-binding transcriptional dual regulator AgaR [Escherichia coli
O26:H11 str. 11368]
gi|257766238|dbj|BAI37733.1| DNA-binding transcriptional dual regulator AgaR [Escherichia coli
O111:H- str. 11128]
gi|323154339|gb|EFZ40540.1| putative aga operon transcriptional repressor [Escherichia coli
EPECa14]
gi|332102394|gb|EGJ05740.1| DNA-binding transcriptional dual regulator [Shigella sp. D9]
Length = 269
Score = 42.2 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
MKR+ A+ A++ + G + + +G+T +A + V + + N
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMN 139
>gi|307705840|ref|ZP_07642681.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK597]
gi|307620626|gb|EFN99721.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK597]
Length = 257
Score = 42.2 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ GM + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSGMCIYLDSSTTVYELCPHLAELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVRDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|30064827|ref|NP_838998.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 2457T]
gi|56480467|ref|NP_709684.2| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 301]
gi|110807430|ref|YP_690950.1| putative DeoR-type transcriptional regulator [Shigella flexneri 5
str. 8401]
gi|30043087|gb|AAP18809.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 2457T]
gi|56384018|gb|AAN45391.2| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 301]
gi|110616978|gb|ABF05645.1| putative DEOR-type transcriptional regulator [Shigella flexneri 5
str. 8401]
gi|281603272|gb|ADA76256.1| putative DEOR-type transcriptional regulator [Shigella flexneri
2002017]
Length = 261
Score = 42.2 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+ A Y+ DG T+ + G+T + L
Sbjct: 78 SQTEKKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL 115
>gi|220915049|ref|YP_002490357.1| transcriptional regulator, DeoR family [Methylobacterium nodulans
ORS 2060]
gi|219952800|gb|ACL63190.1| transcriptional regulator, DeoR family [Methylobacterium nodulans
ORS 2060]
Length = 263
Score = 42.2 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 42/140 (30%), Gaps = 21/140 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-NGFRVQVIP----------- 53
K + A Q V G + + G+TA+E +A++ G +++
Sbjct: 81 AKHRVGQAAAQLVTPGSCVYLDAGTTAREVGRAIAERARAEGLTARIVTHAVNIGAELAG 140
Query: 54 ----SSRNTENFCKIHHIPLHSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGALLR 104
S + P V+ + L G ID + L
Sbjct: 141 IVGLSVHQLGGEVDPGTLAATGPALVTELRGLNFDLYFMGVTGIDPERGMTNSTPVGLEV 200
Query: 105 EKIIAHAASRFIVIGDESKR 124
++ A V+ D SK
Sbjct: 201 KRAAMSRARETWVVADVSKW 220
>gi|254469566|ref|ZP_05082971.1| transcriptional regulator, DeoR family [Pseudovibrio sp. JE062]
gi|211961401|gb|EEA96596.1| transcriptional regulator, DeoR family [Pseudovibrio sp. JE062]
Length = 257
Score = 42.2 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 20/136 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ----------VIPSSR 56
KR A V DGMTL + GST L ++ V V +
Sbjct: 79 KRLVASVVCDVVEDGMTLYLDVGSTTAYVAEDL--RLRKNLTVVTNSIGVAQTLVSVNGN 136
Query: 57 NTENFCKIHHIPL------HSPEDVSS--VDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ V +D++I D + + + I
Sbjct: 137 RVHLLGGEMQEDDRGTFGHDTYTQVQRFALDMAIFSLDAVSASKGFLYQSSVESQLSAAI 196
Query: 109 AHAASRFIVIGDESKR 124
A +A + ++ D K
Sbjct: 197 AESADQVLIAFDHGKL 212
>gi|323178841|gb|EFZ64417.1| putative aga operon transcriptional repressor [Escherichia coli
1180]
Length = 258
Score = 42.2 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
MKR+ A+ A++ + G + + +G+T +A + V + + N
Sbjct: 81 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKHTDVIAMTNGMN 128
>gi|304407438|ref|ZP_07389090.1| transcriptional regulator, DeoR family [Paenibacillus
curdlanolyticus YK9]
gi|304343389|gb|EFM09231.1| transcriptional regulator, DeoR family [Paenibacillus
curdlanolyticus YK9]
Length = 261
Score = 42.2 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 41/134 (30%), Gaps = 17/134 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL----------------LADKIANGFRVQ 50
K A +A + + +G +G+ +G T + +A ++A
Sbjct: 86 KERIAAKAAELINEGDVIGL-SGGTTNYLIARSIKNRRGITVVTNAVNIAMELAGSEVQV 144
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
V+ N ++ + ++ G D + + K +
Sbjct: 145 VVTGGIMRHNSFELCGPLGEAMVAHLNIGKMFIGVDGVSETGGITTYSEQEAQIAKALIA 204
Query: 111 AASRFIVIGDESKR 124
+ + I + D +K
Sbjct: 205 RSQQTIAVFDHTKV 218
>gi|300313730|ref|YP_003777822.1| DeoR family transcription regulator protein [Herbaspirillum
seropedicae SmR1]
gi|300076515|gb|ADJ65914.1| DeoR family transcription regulator protein [Herbaspirillum
seropedicae SmR1]
Length = 267
Score = 42.2 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 42/137 (30%), Gaps = 14/137 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
KR AR A + +G T+ + G+T LA K + + R
Sbjct: 80 QPAQKRAIARHAAEMCDNGETIIINGGTTTFLMAEYLAQKRLKILTNSFLMAERLLTTSE 139
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRL----------RLIKGYGGA----LLREKII 108
+P +V LS D + G A + EK +
Sbjct: 140 NQIIVPGGQIYREQNVILSPFENDITQHHYASKMFMGIYGVSMLGLMEADPLLIQAEKRL 199
Query: 109 AHAASRFIVIGDESKRV 125
A + +V+ D SK
Sbjct: 200 LGQAEQLVVLADSSKFS 216
>gi|161506174|ref|YP_001573286.1| DNA-binding transcriptional regulator AgaR [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867521|gb|ABX24144.1| hypothetical protein SARI_04365 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 269
Score = 42.2 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+KR+ AR A++ + G + + +G+T +A + V + + N N
Sbjct: 92 LKRSIARAAVELIKPGHRVILDSGTTTY----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 66 HIPLHSPE----DVSSVDLSIDGFDEIDSRLRL---IKGYGGALLRE------------- 105
S+ D + G L
Sbjct: 148 EGVELLMTGGHLRRQSLSFYGDQAEHSLQNYHFDMLFLGVDAIDLERGISTHNEDEARLN 207
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A + IV+ D SK
Sbjct: 208 RRMCEVAEKIIVVTDSSKF 226
>gi|332362752|gb|EGJ40548.1| lactose PTS family porter repressor [Streptococcus sanguinis SK49]
Length = 248
Score = 42.2 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ + DG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIADGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKI 64
K
Sbjct: 128 KLKE 131
>gi|324990618|gb|EGC22554.1| lactose PTS family porter repressor [Streptococcus sanguinis SK353]
gi|332363465|gb|EGJ41248.1| lactose PTS family porter repressor [Streptococcus sanguinis SK355]
gi|332366030|gb|EGJ43786.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1059]
Length = 248
Score = 42.2 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ + DG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIADGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKI 64
K
Sbjct: 128 KLKE 131
>gi|323352690|ref|ZP_08087660.1| lactose PTS family porter repressor [Streptococcus sanguinis VMC66]
gi|322121726|gb|EFX93472.1| lactose PTS family porter repressor [Streptococcus sanguinis VMC66]
Length = 248
Score = 42.2 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ + DG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIADGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKI 64
K
Sbjct: 128 KLKE 131
>gi|284006872|emb|CBA72139.1| aga operon transcriptional repressor (DeoR-family transcriptional
regulator) [Arsenophonus nasoniae]
Length = 257
Score = 42.2 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQ 50
+K A +A ++V DG +L + +GST E + L A ++AN ++
Sbjct: 80 LKILIAAKAAEFVQDGDSLIIDSGSTTAEMVPFLRNHHALVVMTNALNIAYQLANFEQID 139
Query: 51 VIP----SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
VI + +N+ + + +++ L +DGFD G A L +
Sbjct: 140 VIVLGGNTRKNSYSIYGSVAEQQLAQYRFNTLFLGVDGFD--LEAGITTPHPGEAHLN-R 196
Query: 107 IIAHAASRFIVIGDESKR 124
I+ A + IV+ D SK
Sbjct: 197 IMCDVAQQIIVVTDGSKF 214
>gi|330976383|gb|EGH76440.1| regulatory protein, DeoR [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 255
Score = 42.2 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVCRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D + L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|309703066|emb|CBJ02398.1| glucitol operon repressor [Escherichia coli ETEC H10407]
Length = 257
Score = 42.2 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 24/151 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIANG 46
K A + ++ DG ++ + GST + L++
Sbjct: 77 KKELIAEATVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQ 136
Query: 47 -FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + + +F + + DG D + +
Sbjct: 137 TILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDL----NAGVTTFNEVYTVS 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +AA I++ D SK + +E
Sbjct: 193 KAMCNAAREVILMADSSKFGRKSPNVVCSLE 223
>gi|327468979|gb|EGF14451.1| lactose PTS family porter repressor [Streptococcus sanguinis SK330]
Length = 248
Score = 42.2 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ AR+ + DG T+ +G+G+T L +G + ++ +S
Sbjct: 73 MLNVEEKKQIARKCADLIADGDTVFIGSGTTTDFIGDYL-----DGKNISIVTNSLPIFE 127
Query: 61 FCKI 64
K
Sbjct: 128 KLKE 131
>gi|312794152|ref|YP_004027075.1| DeoR family transcriptional regulator [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312877287|ref|ZP_07737254.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795920|gb|EFR12282.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
lactoaceticus 6A]
gi|312181292|gb|ADQ41462.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 253
Score = 42.2 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP----------S 54
Q K A AI + +GM + + TG+T +A K+ + + VI +
Sbjct: 77 QEKERIALEAINRIKEGMVVILDTGTTT----QQIARKLKSFQHITVITNGINIVNELIT 132
Query: 55 SRNTENFCKIHHIPLHSPEDVSS------VDLSIDGFDEIDSRLRLIKGYGGALLRE--- 105
+ + F + + V + S D S + L KG + + E
Sbjct: 133 NNSINLFLVGGKVKNSNFSTVGPEAQKAFLQFSADIAFIGTSGISLEKGLTTSDVFEAEV 192
Query: 106 -KIIAHAASRFIVIGDESKRVD 126
+ + ++ IV+ D SK
Sbjct: 193 KRAMIDSSKEVIVVADSSKFKK 214
>gi|294508950|ref|YP_003565839.1| transcriptional regulator, DeoR family [Bacillus megaterium QM
B1551]
gi|294352254|gb|ADE72576.1| transcriptional regulator, DeoR family [Bacillus megaterium QM
B1551]
Length = 254
Score = 42.2 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ LQ KR A+ A YV +G + + +G+T E + L +K
Sbjct: 75 NQLQ-KRLIAKTAADYVENGDVIFIDSGTTTLEMITFLKNK 114
>gi|228992423|ref|ZP_04152352.1| Fructose repressor [Bacillus pseudomycoides DSM 12442]
gi|228767307|gb|EEM15941.1| Fructose repressor [Bacillus pseudomycoides DSM 12442]
Length = 250
Score = 42.2 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A +V G + + GST E + L +K + N R
Sbjct: 77 QVKKQIAKHAASFVAKGDCIYLDAGSTTFEMIPYLIEKEVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +K
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQQY-RFDKCFLGANGVHEQLGYTTPDPEEALLKKRAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + IE
Sbjct: 196 TLANEGYFLIDESKFAEVAFAKIASIE 222
>gi|18139851|gb|AAL60174.1|AF416702_12 GatR [Klebsiella oxytoca]
Length = 257
Score = 42.2 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A+ + +GMT+ + +GST L
Sbjct: 84 KKRIAQAAVAMISEGMTVILDSGSTTLLIAEALVRM 119
>gi|332998476|gb|EGK18074.1| hypothetical protein SFK272_4340 [Shigella flexneri K-272]
Length = 221
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A Y+ DG T+ + G+T + L +
Sbjct: 38 SQTEKKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNH 78
>gi|289677526|ref|ZP_06498416.1| regulatory protein, DeoR [Pseudomonas syringae pv. syringae FF5]
Length = 255
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVCRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D + L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|228998480|ref|ZP_04158069.1| Fructose repressor [Bacillus mycoides Rock3-17]
gi|228761271|gb|EEM10228.1| Fructose repressor [Bacillus mycoides Rock3-17]
Length = 249
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A +V G + + GST E + L +K + N R
Sbjct: 77 QVKKQIAKHAASFVAKGDCIYLDAGSTTFEMIPYLIEKEVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +K
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQQY-RFDKCFLGANGVHEQLGYTTPDPEEALLKKRAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + IE
Sbjct: 196 TLANEGYFLIDESKFAEVAFAKIASIE 222
>gi|163751427|ref|ZP_02158652.1| transcriptional regulator, DeoR family protein [Shewanella benthica
KT99]
gi|161328730|gb|EDP99878.1| transcriptional regulator, DeoR family protein [Shewanella benthica
KT99]
Length = 256
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 28/154 (18%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK------------------ 42
M+ K+N A+ A + + D + + +GST + L K
Sbjct: 76 MN----KQNIAKAAARLIKDHNRIIIDSGSTTSGLVQELGSKRGLVVMTNALQLASAIHE 131
Query: 43 --IANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGG 100
+ ++E+F + + + + DG D + G
Sbjct: 132 LEYEPTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDIERGTTTFNELTGL 191
Query: 101 ALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ K++A + IV+ + +K + LP
Sbjct: 192 S----KVMAEVSREVIVMLESNKIGRRIPNLELP 221
>gi|330898629|gb|EGH30048.1| regulatory protein, DeoR [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 255
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVCRIREHARIIVDSGSTTAALIPELGQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D + L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|328955540|ref|YP_004372873.1| DeoR family transcriptional regulator [Coriobacterium glomerans
PW2]
gi|328455864|gb|AEB07058.1| transcriptional regulator, DeoR family [Coriobacterium glomerans
PW2]
Length = 270
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K RA Q V DG T+ +GST EF+ LA +
Sbjct: 90 QEAKIAIGARAAQLVRDGETIFCDSGSTTFEFVRALASR 128
>gi|313647075|gb|EFS11530.1| uncharacterized HTH-type transcriptional regulator yihW [Shigella
flexneri 2a str. 2457T]
Length = 245
Score = 42.2 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A Y+ DG T+ + G+T + L +
Sbjct: 62 SQTEKKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNH 102
>gi|167760152|ref|ZP_02432279.1| hypothetical protein CLOSCI_02524 [Clostridium scindens ATCC 35704]
gi|167662277|gb|EDS06407.1| hypothetical protein CLOSCI_02524 [Clostridium scindens ATCC 35704]
Length = 250
Score = 42.2 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
+ K+ AR+A YV DG TL + +GST F LA KI + +
Sbjct: 73 ETKQRIARKAATYVQDGETLIIESGSTCTLFAYELA-KIRQNITIITNSMYLASY 126
>gi|253583937|ref|ZP_04861135.1| DeoR family transcriptional regulator [Fusobacterium varium ATCC
27725]
gi|251834509|gb|EES63072.1| DeoR family transcriptional regulator [Fusobacterium varium ATCC
27725]
Length = 243
Score = 42.2 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
+ K + A V +G + + GST + + L + ++V+ +
Sbjct: 75 EEKNKIGKAAAALVKNGDIIFLDAGSTTECMIKYL----EDKADIKVVTNGFTHME 126
>gi|291297176|ref|YP_003508574.1| DeoR family transcriptional regulator [Meiothermus ruber DSM 1279]
gi|290472135|gb|ADD29554.1| transcriptional regulator, DeoR family [Meiothermus ruber DSM 1279]
Length = 260
Score = 42.2 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + A V DG T+ + GST E L + N V VI S+ N + H
Sbjct: 82 KESIGSYAASLVRDGETIIVDVGSTTTELAKALPPSLKN---VVVITSALNIALLLESHP 138
Query: 67 IPLHS-------------PEDVSSVDLSIDGFDEIDSRLRLI---KGYGGALLRE----K 106
++ L D+ + KG+ L+E +
Sbjct: 139 GVTVIVTGGTLRPLQHSLVNPYGTLLLREINADKAFIGCNGVHPDKGFTNTNLQEAEIKR 198
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIEI 137
+ AA IV+ D SK + + P+EI
Sbjct: 199 AMIEAAREIIVLADHSKLMQIAAARIGPLEI 229
>gi|327394415|dbj|BAK11837.1| putative HTH-type transcriptional regulator YgbI [Pantoea ananatis
AJ13355]
Length = 256
Score = 42.2 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 23/152 (15%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ + A Q + + + G+T LA +IA+ + V+ + N
Sbjct: 76 NEEKKAIGKLAAQLIPPDSCIYLDAGTTTL----ALAREIADREDLLVVTNDFMVTNLLM 131
Query: 64 I---------------HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY---GGALLRE 105
+ + + + ++G +
Sbjct: 132 EASRCRVIHTGGTVCRDNRSCIGDAAARHLRQLAIDIAFVSTSSWGLRGLFTPDEDKVAV 191
Query: 106 KI-IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +S+ I++ D SK LP+E
Sbjct: 192 KQAVCEVSSKRILLSDSSKYDKIATWLALPLE 223
>gi|332998746|gb|EGK18342.1| putative aga operon transcriptional repressor [Shigella flexneri
VA-6]
gi|333000267|gb|EGK19850.1| putative aga operon transcriptional repressor [Shigella flexneri
K-218]
Length = 274
Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKYTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|238790520|ref|ZP_04634288.1| aga operon transcriptional repressor [Yersinia frederiksenii ATCC
33641]
gi|238721389|gb|EEQ13061.1| aga operon transcriptional repressor [Yersinia frederiksenii ATCC
33641]
Length = 269
Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+KR+ AR A + G + + +G+T +A + N V + + N N
Sbjct: 92 LKRSIARVAANLIKPGHRVILDSGTTTY----EIARLMRNHKEVIAMTNGMNVANSLLDA 147
Query: 66 HIPLHSPE----DVSSVDLSIDGFDEIDSRLRL---IKGYGGALLRE------------- 105
S+ D D+ G L
Sbjct: 148 EGVELLMTGGHLRRQSLSFYGDQADQSLQNYHFDMLFLGVDAIDLERGISTHNEDEARLN 207
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A R IV+ D SK
Sbjct: 208 RRMCEVAERIIVVTDSSKF 226
>gi|225569597|ref|ZP_03778622.1| hypothetical protein CLOHYLEM_05691 [Clostridium hylemonae DSM
15053]
gi|225161805|gb|EEG74424.1| hypothetical protein CLOHYLEM_05691 [Clostridium hylemonae DSM
15053]
Length = 263
Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 17/149 (11%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K A+ A+Q+V + + +G+TA L D I + ++ N
Sbjct: 73 QQYEKEAIAKAALQFVHPYSVICIDSGTTAHTVSRFLPDNIPLSVITSNLMTAVELSNKE 132
Query: 63 ---------KIHHIPLHSPEDVSSVDLSIDGFDE--IDSRLRLIKGYGGALLR-----EK 106
++H + + + L+ D I +R I G +K
Sbjct: 133 NIQTYLVGGMLYHRTKSIMTESAEL-LTQHPADVAFISARAFRIPGGAFEHTYPLVATKK 191
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A + +++ D +K +P+
Sbjct: 192 ALVSIARKTVLLIDHTKCEHVSLCNSIPL 220
>gi|225569554|ref|ZP_03778579.1| hypothetical protein CLOHYLEM_05648 [Clostridium hylemonae DSM
15053]
gi|225161762|gb|EEG74381.1| hypothetical protein CLOHYLEM_05648 [Clostridium hylemonae DSM
15053]
Length = 248
Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
K+ ARRA V DG TL + +GST F LA N
Sbjct: 73 KQKIARRAASSVQDGETLIIESGSTCALFADELAKSKKN 111
>gi|222082180|ref|YP_002541545.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium radiobacter K84]
gi|221726859|gb|ACM29948.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium radiobacter K84]
Length = 257
Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
D + +KR ARRA + V +G TL + GST + LA++ G +V
Sbjct: 78 DKVDVKRRIARRAAELVPNGATLFLDAGSTCEAVAEALAER--KGLKVVTYSLRAAMILM 135
>gi|125718501|ref|YP_001035634.1| sugar metabolism transcriptional repressor [Streptococcus sanguinis
SK36]
gi|125498418|gb|ABN45084.1| Transcriptional repressor of sugar metabolism, GlpR/DeoR family,
putative [Streptococcus sanguinis SK36]
Length = 251
Score = 42.2 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 50/152 (32%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEITNQHLRVITNCLPIFRDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|237807023|ref|YP_002891463.1| DNA-binding transcriptional repressor SrlR [Tolumonas auensis DSM
9187]
gi|237499284|gb|ACQ91877.1| transcriptional regulator, DeoR family [Tolumonas auensis DSM 9187]
Length = 254
Score = 42.2 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 24/152 (15%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSR-- 56
+K+ +A V DG ++ + GST + + L +++A N + SR
Sbjct: 77 QNIKQRIGAKAASLVHDGESIILDNGSTTLQMVPWLVERVALTVMTNSLLIINEAVSRDC 136
Query: 57 -------------NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
+ +F + + DGFD A
Sbjct: 137 NMNLLMPGGTYRKRSSSFHGGLAEQAFRAFTFDKLFIGADGFDIEQGTTTF----NEAYQ 192
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ + AA + IV+ D SK ++PI
Sbjct: 193 VSQAMCQAAKQIIVVTDSSKFGRKTPNVVVPI 224
>gi|91217601|ref|ZP_01254559.1| Putative aga operon transcriptional repressor [Psychroflexus
torquis ATCC 700755]
gi|91184281|gb|EAS70666.1| Putative aga operon transcriptional repressor [Psychroflexus
torquis ATCC 700755]
Length = 252
Score = 42.2 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-ANGFRVQVIPSSRNTENFCKIH 65
K A A++ + ++ +G+G++ M LA I G S + K
Sbjct: 78 KNAIAEAAVKLIKPEDSIMIGSGTS----MQSLAKAINIEGNLNITTSSLNVSLELTKSP 133
Query: 66 HIPLHSPE-------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
H + + S +L G D ID + K
Sbjct: 134 HYDILQLGGNVRHSSSSVTGHFSQAILENISCNLLFLGVDGIDMSYGCTTTSLSEAMLNK 193
Query: 107 IIAHAASRFIVIGDESKR 124
+ +A + I++ D SK
Sbjct: 194 KMIESAQKIIILADSSKF 211
>gi|294636797|ref|ZP_06715134.1| transcriptional regulator, DeoR family [Edwardsiella tarda ATCC
23685]
gi|291089988|gb|EFE22549.1| transcriptional regulator, DeoR family [Edwardsiella tarda ATCC
23685]
Length = 242
Score = 42.2 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS 54
+K+ A A V DG T+ + +GST LA++ + + +
Sbjct: 75 LKQQLAAYAASLVEDGETIFIESGSTNALLARYLAER--KHITLVTVST 121
>gi|312136097|ref|YP_004003435.1| DeoR family transcriptional regulator [Caldicellulosiruptor
owensensis OL]
gi|311776148|gb|ADQ05635.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
owensensis OL]
Length = 253
Score = 41.8 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP----------S 54
Q K A AI + +GM + + TG+T +A K+ + + VI +
Sbjct: 77 QEKERIAFEAINRIKEGMVVILDTGTTT----QQIARKLKSFQHITVITNGINIVNELIT 132
Query: 55 SRNTENFCKIHHIPLHSPEDVSS------VDLSIDGFDEIDSRLRLIKGYGGALLRE--- 105
+ + F + + V + S D S + L KG + + E
Sbjct: 133 NNSINLFLVGGKVKNSNFSTVGPEAQKAFLQFSADIAFIGTSGISLEKGLTTSDVFEAEV 192
Query: 106 -KIIAHAASRFIVIGDESKRVD 126
+ + ++ IV+ D SK
Sbjct: 193 KRAMIDSSKEVIVVADSSKFKK 214
>gi|83716949|ref|YP_439086.1| DeoR family transcriptional regulator [Burkholderia thailandensis
E264]
gi|83650774|gb|ABC34838.1| transcriptional regulator, DeoR family [Burkholderia thailandensis
E264]
Length = 348
Score = 41.8 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LA++
Sbjct: 172 AKRAIGRRAAEFVPDGASVLLDSGSTVHAVALALAERHR 210
>gi|332308204|ref|YP_004436055.1| transcriptional regulator, DeoR family [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175533|gb|AEE24787.1| transcriptional regulator, DeoR family [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 259
Score = 41.8 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI 43
K A A+Q + D + + +GST + LL K+
Sbjct: 78 KIAIAEAALQLIKDHNRIIIDSGSTTAALIPLLKSKL 114
>gi|320547767|ref|ZP_08042051.1| lactose PTS family porter repressor [Streptococcus equinus ATCC
9812]
gi|320447527|gb|EFW88286.1| lactose PTS family porter repressor [Streptococcus equinus ATCC
9812]
Length = 256
Score = 41.8 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
++ KR A+ A Q + DG T+ +G G+T + F L + RV T
Sbjct: 79 QIEEKRAIAKFASQLIQDGETVFIGPGTTLEHFAHEL---VTKNIRVVTNSLPVFTILNQ 135
Query: 63 KIHHIPLHSPEDVSSVDLSIDGF 85
+ + + + + G
Sbjct: 136 NKSTDLILTGGEYRDITGAFVGS 158
>gi|291533011|emb|CBL06124.1| Transcriptional regulators of sugar metabolism [Megamonas
hypermegale ART12/1]
Length = 252
Score = 41.8 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR AAR+A+ Y+ + + +G+T L + + VI ++ N
Sbjct: 77 KLKREAARKALAYIKPNAIIALNSGTTNTILAQEL---VVKKDNITVITNNLAAINILIQ 133
Query: 65 HH 66
+
Sbjct: 134 NP 135
>gi|114763397|ref|ZP_01442804.1| putative transcription regulator protein [Pelagibaca bermudensis
HTCC2601]
gi|114543935|gb|EAU46946.1| putative transcription regulator protein [Roseovarius sp. HTCC2601]
Length = 283
Score = 41.8 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 14/144 (9%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
K+ AR A + V DG + + G+T + + LA + IA +
Sbjct: 98 KQAIARAACELVNDGDPIIINGGTTTFQMVHPLASRRVQVFTNSFPIAEHLLKHSKNTVM 157
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA----LLREKIIAHAA 112
+ + SP + + ++ G A + E + A
Sbjct: 158 LSGGVIYREQQIVLSPFENDVTRNFYARRMFMGAQGVGPLGLMEADPLLIQAEHKLIGQA 217
Query: 113 SRFIVIGDESKRVDFLGRGMLPIE 136
+V+ D +K + P+E
Sbjct: 218 DELVVLVDSTKFEQRSSLVLCPLE 241
>gi|52424242|ref|YP_087379.1| GlpR protein [Mannheimia succiniciproducens MBEL55E]
gi|52306294|gb|AAU36794.1| GlpR protein [Mannheimia succiniciproducens MBEL55E]
Length = 258
Score = 41.8 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 44/149 (29%), Gaps = 30/149 (20%)
Query: 1 MD--ALQ----MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--ADKIANGFRVQVI 52
MD + K + A+ A + + D + + +GST + L + +
Sbjct: 71 MDESQDENLSKQKLSIAKAAAERIRDHHRIIIDSGSTTAALIKQLNSKQGLVVMTNSLSV 130
Query: 53 PSSRNTENFCKIHHIPLHSPE------------------DVSSVDLSIDGFDEIDSRLRL 94
S + + + + D + + DG D
Sbjct: 131 ASELRSLENEPTLLMTGGTWDTRSESFQGKVAEQVLRSYDFDQLFIGADGIDLARGTTTF 190
Query: 95 IKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + +++A + IV+ + K
Sbjct: 191 NELVELS----RVMAEVSREVIVMVESQK 215
>gi|323359071|ref|YP_004225467.1| transcriptional regulator of sugar metabolism [Microbacterium
testaceum StLB037]
gi|323275442|dbj|BAJ75587.1| transcriptional regulator of sugar metabolism [Microbacterium
testaceum StLB037]
Length = 264
Score = 41.8 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 17/134 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A A++ + G T+ + G+T + L A G + P+ +
Sbjct: 77 KARVAAAALELIEPGATVLLDGGTTTLALVEALPRSFA-GTVITHSPTIAAALLHHEAEV 135
Query: 67 IPLH--------------SPEDVSSV--DLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
I + + E + D+ G + L G ++++A
Sbjct: 136 IVIGGRVFKHSAVACGSAAVEAAQRISADVFFLGVTGVHPSAGLTTGDADEAAMKRVLAE 195
Query: 111 AASRFIVIGDESKR 124
A+ V+ E K
Sbjct: 196 RAAETFVLASEEKL 209
>gi|291618013|ref|YP_003520755.1| YgbI [Pantoea ananatis LMG 20103]
gi|291153043|gb|ADD77627.1| YgbI [Pantoea ananatis LMG 20103]
Length = 258
Score = 41.8 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 23/152 (15%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ + A Q + + + G+T LA +IA+ + V+ + N
Sbjct: 78 NEEKKAIGKLAAQLIPPDSCIYLDAGTTTL----ALAREIADREDLLVVTNDFMVTNLLM 133
Query: 64 I---------------HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY---GGALLRE 105
+ + + + ++G +
Sbjct: 134 EASRCRVIHTGGTVCRDNRSCIGDAAARHLRQLAIDIAFVSTSSWGLRGLFTPDEDKVAV 193
Query: 106 KI-IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K + +S+ I++ D SK LP+E
Sbjct: 194 KQAVCEVSSKRILLSDSSKYDKIATWLALPLE 225
>gi|257055697|ref|YP_003133529.1| transcriptional regulator, DeoR family [Saccharomonospora viridis
DSM 43017]
gi|256585569|gb|ACU96702.1| transcriptional regulator, DeoR family [Saccharomonospora viridis
DSM 43017]
Length = 261
Score = 41.8 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K AR A V G +G+ G+T E +A +
Sbjct: 76 EEKTRIAREAASMVEPGQVVGLNGGTTTTEVAREIAVR 113
>gi|139438361|ref|ZP_01771877.1| Hypothetical protein COLAER_00867 [Collinsella aerofaciens ATCC
25986]
gi|133775900|gb|EBA39720.1| Hypothetical protein COLAER_00867 [Collinsella aerofaciens ATCC
25986]
Length = 221
Score = 41.8 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K ARR+++ + +G T+ +GTG+T ++ +L FR++++ +S + N +
Sbjct: 49 EEKLQIARRSVELIEEGSTIFLGTGTTVEQMASMLPA-----FRLRIVTNSLSVFNLLEA 103
Query: 65 HHIPLHSP 72
Sbjct: 104 REYCELCL 111
>gi|146313206|ref|YP_001178280.1| DNA-binding transcriptional regulator AgaR [Enterobacter sp. 638]
gi|145320082|gb|ABP62229.1| transcriptional regulator, DeoR family [Enterobacter sp. 638]
Length = 269
Score = 41.8 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 26/140 (18%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN-------- 57
MKR+ A+ A + G + + +G+T +A + V + + N
Sbjct: 92 MKRSIAQAAANLIKPGHRVILDSGTTTY----EIARMMRQHSDVIAMTNGMNVANALLEA 147
Query: 58 -------TENFCKIHHIPLHSPEDVSSVDLS-----IDGFDEIDSRLRL-IKGYGGALLR 104
T + + + S+ G D ID + A L
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDLLFLGVDAIDLDRGVSTHNEDEARLN 207
Query: 105 EKIIAHAASRFIVIGDESKR 124
K+ A R IV+ D +K
Sbjct: 208 RKMCE-VAERIIVVTDSTKF 226
>gi|312126382|ref|YP_003991256.1| DeoR family transcriptional regulator [Caldicellulosiruptor
hydrothermalis 108]
gi|311776401|gb|ADQ05887.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
hydrothermalis 108]
Length = 253
Score = 41.8 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP----------S 54
Q K A AI + +GM + + TG+T +A K+ + + VI +
Sbjct: 77 QEKERIALEAINRIKEGMVVILDTGTTT----QQIARKLKSFQHITVITNGINIVNELIT 132
Query: 55 SRNTENFCKIHHIPLHSPEDVSS------VDLSIDGFDEIDSRLRLIKGYGGALLRE--- 105
+ + F + + V + S D S + L KG + + E
Sbjct: 133 NNSINLFLVGGKVKNSNFSTVGPEAQKAFLQFSADIAFIGTSGISLEKGLTTSDVFEAEV 192
Query: 106 -KIIAHAASRFIVIGDESKRVD 126
+ + ++ IV+ D SK
Sbjct: 193 KRAMIDSSKEVIVVADSSKFKK 214
>gi|253988253|ref|YP_003039609.1| aga operon transcriptional repressor of sugar metabolism
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|211638755|emb|CAR67372.1| putative aga operon transcriptional repressor of sugar metabolism
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253779703|emb|CAQ82864.1| putative aga operon transcriptional repressor of sugar metabolism
[Photorhabdus asymbiotica]
Length = 257
Score = 41.8 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 23/143 (16%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--- 52
M+ R AA+ A Q+V DG L + +GST + + L ++ + N +
Sbjct: 76 MNRDVKSRIAAKAA-QFVKDGDALILDSGSTTTQIVPHLKERRDLVVMTNALNIAYELAG 134
Query: 53 -----------PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
+N+ + ++ L +DGFD G A
Sbjct: 135 FDQINVMVLGGSVRQNSYSLYGPAAEQQLRQYRFDTLFLGVDGFD--LEAGITTPHSGEA 192
Query: 102 LLREKIIAHAASRFIVIGDESKR 124
L +++ A I + D SK
Sbjct: 193 HLN-RVMCEVAHEIIAVADASKF 214
>gi|327395386|dbj|BAK12808.1| putative HTH-type transcriptional regulator YihW [Pantoea ananatis
AJ13355]
Length = 279
Score = 41.8 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ KR A Y+ DG T+ + G+T + LA+
Sbjct: 92 SQTEEKRAIAEAIADYIPDGSTVFITIGTTVEHVARALANH 132
>gi|291619052|ref|YP_003521794.1| YihW [Pantoea ananatis LMG 20103]
gi|291154082|gb|ADD78666.1| YihW [Pantoea ananatis LMG 20103]
Length = 279
Score = 41.8 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ KR A Y+ DG T+ + G+T + LA+
Sbjct: 92 SQTEEKRAIAEAIADYIPDGSTVFITIGTTVEHVARALANH 132
>gi|307318722|ref|ZP_07598155.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
AK83]
gi|306895749|gb|EFN26502.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
AK83]
Length = 261
Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 9/84 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K R+A + V DGM + + +G+T L +G R + ++
Sbjct: 84 AKAAIGRKAAELVKDGMVVFLDSGTTTLAVSHAL-----SGLRDLTVCTTG----LAIAL 134
Query: 66 HIPLHSPEDVSSVDLSIDGFDEID 89
H+ V + ID +E
Sbjct: 135 HMCRQPQVRVHMLGGEIDPAEEAA 158
>gi|289168198|ref|YP_003446467.1| transcriptional repressor of fructose operon [Streptococcus mitis
B6]
gi|288907765|emb|CBJ22602.1| transcriptional repressor of fructose operon [Streptococcus mitis
B6]
Length = 246
Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
Q K+ A++A + + + + G+T + L +K A + IP+
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIHELVNKNITVVTNSIHHAAQLVEKQIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ I + ++ + + G + +D ++ I
Sbjct: 137 VMVGGSVKMATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRAILE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + V+ D SK + P+
Sbjct: 196 NAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|307709389|ref|ZP_07645847.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK564]
gi|307619972|gb|EFN99090.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK564]
Length = 246
Score = 41.8 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
Q K+ A++A + + + + G+T + L +K A + IP+
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIHELVNKNVTVVTNSIHHAAQLVEKQIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ I + ++ + + G + +D ++ I
Sbjct: 137 VMVGGSVKMATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRAILE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + V+ D SK + P+
Sbjct: 196 NAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|307701995|ref|ZP_07639003.1| transcriptional repressor of the fructose operon [Streptococcus
mitis NCTC 12261]
gi|307706819|ref|ZP_07643624.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK321]
gi|307616640|gb|EFN95829.1| transcriptional repressor of the fructose operon [Streptococcus
mitis NCTC 12261]
gi|307617904|gb|EFN97066.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK321]
Length = 246
Score = 41.8 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
Q K+ A++A + + + + G+T + L +K A + IP+
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIHELVNKNITVVTNSIHHAAQLVEKQIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ I + ++ + + G + +D ++ I
Sbjct: 137 VMVGGSVKMATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRAILE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + V+ D SK + P+
Sbjct: 196 NAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|307727626|ref|YP_003910839.1| DeoR family transcriptional regulator [Burkholderia sp. CCGE1003]
gi|307588151|gb|ADN61548.1| transcriptional regulator, DeoR family [Burkholderia sp. CCGE1003]
Length = 251
Score = 41.8 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
KR RA ++V DG +L + +GST + L D+ R+ + +
Sbjct: 76 AKRAIGERAAEFVPDGASLIVDSGSTTQAVARALLDR----HRLSIYTNDWRIALLLGRR 131
Query: 66 HIP---------------LHSPEDVSSV-----DLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + V + D + G I L A
Sbjct: 132 NENRVTLLGGELSDIEDATFGLDTVHQLTQYHADFAFIGAGGISPDGYLTDYSRMAAEVR 191
Query: 106 KIIAHAASRFIVIGDESKR 124
+ AA +++ D K
Sbjct: 192 SRMIAAADTVVIVADHWKF 210
>gi|114762347|ref|ZP_01441805.1| Bacterial regulatory protein, DeoR family [Pelagibaca bermudensis
HTCC2601]
gi|114544965|gb|EAU47969.1| Bacterial regulatory protein, DeoR family [Roseovarius sp.
HTCC2601]
Length = 255
Score = 41.8 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
++K AR A+ V GMT+ + GSTA +L + + + VI ++
Sbjct: 76 QELKSRMARAALDRVEPGMTVMINDGSTAT----VLGEMLVEKRPLTVITNNDAVME 128
>gi|56461693|ref|YP_156974.1| repressor of the glycerol-3-phosphate regulon [Idiomarina
loihiensis L2TR]
gi|56180703|gb|AAV83425.1| Probable repressor of the glycerol-3-phosphate regulon
[Idiomarina loihiensis L2TR]
Length = 234
Score = 41.8 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ +A + V DGMT+ + GST+ F +L
Sbjct: 58 AKKEVGEKATELVEDGMTVFIDCGSTSYWFSRML 91
>gi|328946607|gb|EGG40745.1| lactose PTS family porter repressor [Streptococcus sanguinis
SK1087]
Length = 251
Score = 41.8 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 50/152 (32%), Gaps = 26/152 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G++ +LA++I N + + K
Sbjct: 78 EAKRTVAKKAVELIEDGDTIFLGPGTSV----EVLAEEITNQHLRVITNCLPIFRDLLKK 133
Query: 65 HHIPLHSPEDVSSVD-----------------LSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + + A
Sbjct: 134 KSDTFKVFLLGGEMREATQAFVGEMTNAIMDKMYFTKMFFSGNGIKNGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+K+ ++ ++ D SK + P+
Sbjct: 194 -QKLALERSTETYLLIDSSKIGKEDFTSICPL 224
>gi|322376903|ref|ZP_08051396.1| lactose phosphotransferase system repressor [Streptococcus sp.
M334]
gi|321282710|gb|EFX59717.1| lactose phosphotransferase system repressor [Streptococcus sp.
M334]
Length = 246
Score = 41.8 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
Q K+ A++A + + + + G+T + L +K A + IP+
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIHELVNKNVTVVTNSIHHAAQLVEKQIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ I + ++ + + G + +D ++ I
Sbjct: 137 VMVGGSVKMATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRAILE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + V+ D SK + P+
Sbjct: 196 NAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|270264685|ref|ZP_06192950.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
gi|270041368|gb|EFA14467.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
Length = 257
Score = 41.8 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIANGF------ 47
+ KR A AI+ + DG +L GST + + LA I N
Sbjct: 76 EKKRQIAYAAIKLINDGDSLIFDAGSTVLQMVPHLAQFNNITVMTNSLHIVNALVELDND 135
Query: 48 ---RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + + +F + + DG D + +
Sbjct: 136 QTILMPGGTYRKKSASFHGSLAESAFQKFSFDKLFIGADGVDL----NAGVTTFNEVHNV 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
K + AASR I++ D SK
Sbjct: 192 SKAMCEAASRIILLVDSSKF 211
>gi|24114418|ref|NP_708928.1| DNA-binding transcriptional regulator AgaR [Shigella flexneri 2a
str. 301]
gi|30064468|ref|NP_838639.1| DNA-binding transcriptional regulator AgaR [Shigella flexneri 2a
str. 2457T]
gi|24053593|gb|AAN44635.1| putative DEOR-type transcriptional regulator of aga operon
[Shigella flexneri 2a str. 301]
gi|30042727|gb|AAP18450.1| putative DEOR-type transcriptional regulator of aga operon
[Shigella flexneri 2a str. 2457T]
gi|281602512|gb|ADA75496.1| putative DEOR-type transcriptional regulator of aga operon
[Shigella flexneri 2002017]
gi|332752809|gb|EGJ83194.1| putative aga operon transcriptional repressor [Shigella flexneri
K-671]
gi|332754360|gb|EGJ84726.1| putative aga operon transcriptional repressor [Shigella flexneri
2747-71]
gi|332765120|gb|EGJ95347.1| deoR-like helix-turn-helix domain protein [Shigella flexneri
2930-71]
gi|333014815|gb|EGK34160.1| putative aga operon transcriptional repressor [Shigella flexneri
K-304]
Length = 274
Score = 41.8 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKYTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LSRRMCE-VAERIIVVTDSSKF 226
>gi|253989495|ref|YP_003040851.1| regulatory protein, deor family [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780945|emb|CAQ84107.1| putative regulatory protein, deor family [Photorhabdus asymbiotica]
Length = 275
Score = 41.8 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 51/149 (34%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN-TENFCKIH 65
KR + A+ V DG + + G+T + +A F + +I + + T+
Sbjct: 79 KREIGQYAVSMVEDGQVVYLDAGTTTF----EIGRILAERFHLTIITNDFSITQYLMNKP 134
Query: 66 HIPLHSP-EDVSS------------------VDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ L V +D++ D + + +L ++
Sbjct: 135 QLNLFHTGGQVDKRNHSCVGRTAAMLLRSLNIDIAFISTSSWDLEHGVSTPHEEKVLVKQ 194
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A R +++ D SK + + P+
Sbjct: 195 AVLETARRRVLVSDSSKYGKYGMFRVCPL 223
>gi|167566132|ref|ZP_02359048.1| transcriptional regulator, DeoR family protein [Burkholderia
oklahomensis EO147]
gi|167573255|ref|ZP_02366129.1| transcriptional regulator, DeoR family protein [Burkholderia
oklahomensis C6786]
Length = 252
Score = 41.8 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LAD+
Sbjct: 75 DAKRAIGRRAAEFVPDGASVLLDSGSTVHAVALALADRHR 114
>gi|251798443|ref|YP_003013174.1| DeoR family transcriptional regulator [Paenibacillus sp. JDR-2]
gi|247546069|gb|ACT03088.1| transcriptional regulator, DeoR family [Paenibacillus sp. JDR-2]
Length = 264
Score = 41.8 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 19/135 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRV----------------- 49
K A +A + +G +G+ +G T + L K+ +G V
Sbjct: 88 KERIAAKAASLIEEGDVIGL-SGGTTNYLIAKLL-KLRSGITVVTNAVNIAMELAGSSVQ 145
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
V+ N ++ ++ G D I + + K +
Sbjct: 146 VVVTGGIMRHNSFELCGPLGEGMVAHLNIGKMFIGVDGISANGGITTYSEQEAQIAKALI 205
Query: 110 HAASRFIVIGDESKR 124
+ + D++K
Sbjct: 206 KRSHTTYAVFDQTKV 220
>gi|222530352|ref|YP_002574234.1| DeoR family transcriptional regulator [Caldicellulosiruptor bescii
DSM 6725]
gi|312621262|ref|YP_004022875.1| DeoR family transcriptional regulator [Caldicellulosiruptor
kronotskyensis 2002]
gi|222457199|gb|ACM61461.1| transcriptional regulator, DeoR family [Caldicellulosiruptor bescii
DSM 6725]
gi|312201729|gb|ADQ45056.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
kronotskyensis 2002]
Length = 253
Score = 41.8 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP----------S 54
Q K A AI + +GM + + TG+T +A K+ + + VI +
Sbjct: 77 QEKERIALEAINRIKEGMVVILDTGTTT----QQIARKLKSFQHITVITNGINIVNELIT 132
Query: 55 SRNTENFCKIHHIPLHSPEDVSS------VDLSIDGFDEIDSRLRLIKGYGGALLRE--- 105
+ + F + + V + S D S + L KG + + E
Sbjct: 133 NNSINLFLVGGKVKNSNFSTVGPEAQKAFLQFSADIAFIGTSGISLEKGLTTSDVFEAEV 192
Query: 106 -KIIAHAASRFIVIGDESKRVD 126
+ + ++ IV+ D SK
Sbjct: 193 KRAMIDSSKEVIVVADSSKFKK 214
>gi|167577509|ref|ZP_02370383.1| transcriptional regulator, DeoR family protein [Burkholderia
thailandensis TXDOH]
Length = 252
Score = 41.8 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LA++
Sbjct: 76 AKRAIGRRAAEFVPDGASVLLDSGSTVHAVALALAERHR 114
>gi|313648377|gb|EFS12820.1| putative aga operon transcriptional repressor [Shigella flexneri 2a
str. 2457T]
Length = 263
Score = 41.8 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + + +G+T +A + V + +
Sbjct: 81 MKRSVAKAAVELIQPGHRVILDSGTTTF----EIARLMRKYTDVIAMTNGMNVANALLEA 136
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 137 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 194
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 195 LSRRMCE-VAERIIVVTDSSKF 215
>gi|167615657|ref|ZP_02384292.1| transcriptional regulator, DeoR family protein [Burkholderia
thailandensis Bt4]
gi|257142195|ref|ZP_05590457.1| DeoR family transcriptional regulator [Burkholderia thailandensis
E264]
Length = 252
Score = 41.8 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LA++
Sbjct: 76 AKRAIGRRAAEFVPDGASVLLDSGSTVHAVALALAERHR 114
>gi|325848891|ref|ZP_08170401.1| transcriptional regulator, DeoR family [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480535|gb|EGC83597.1| transcriptional regulator, DeoR family [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 249
Score = 41.8 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 18/149 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-----ADKIANGFRVQVIPSSRNTE 59
K A++AI V + T+ + +G+T+ E L I N F + S +T
Sbjct: 77 DKKTIIAKKAIDLVEENDTIALDSGTTSFELCKKLTSFDKLTLIINDFAIANFLSENSTF 136
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL------------LREKI 107
+ + + ++ D I+ I L +K
Sbjct: 137 KLIFVGGLIGRDINSTNGPK-ALSFLDNINCDKAFISCESFDLKKGFSTFDENQAAFKKR 195
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + I++ D SK IE
Sbjct: 196 LMETSKTKIMLLDSSKFDKVSSFTFSKIE 224
>gi|311069616|ref|YP_003974539.1| putative DeoR family transcriptional regulator [Bacillus atrophaeus
1942]
gi|310870133|gb|ADP33608.1| putative transcriptional regulator (DeoR family) protein [Bacillus
atrophaeus 1942]
Length = 254
Score = 41.8 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 17/134 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD--------------KIANGFRVQVI 52
K+ AR A +YV G + + +TA +L D +++ +++VI
Sbjct: 79 KKAIAREAAEYVESGDRIILDASTTAWYMAKILPDIQLTVITNSMKAAIELSQKDKIEVI 138
Query: 53 PSSRNTENFCKIHHIPLHSPE-DVSSVDLSIDGFDEIDSRLRLIKGY-GGALLREKIIAH 110
+ + + PL + V+ + D L ALL +K +
Sbjct: 139 STGGFLLSESLSYVGPLAERSLETYHVNKTFLSCKGFDINGGLSDSNEWQALL-KKRMIE 197
Query: 111 AASRFIVIGDESKR 124
+ + I++ D SK
Sbjct: 198 RSDQTILMADSSKF 211
>gi|307705164|ref|ZP_07642038.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK597]
gi|307621284|gb|EFO00347.1| lactose phosphotransferase system repressor [Streptococcus mitis
SK597]
Length = 246
Score = 41.8 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
Q K+ A++A + + + + G+T + L +K A + IP+
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIHELVNKNVTVVTNSIHHAAQLVEKQIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ I + ++ + + G + +D ++ I
Sbjct: 137 VMVGGSVKMATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRAILE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + V+ D SK + P+
Sbjct: 196 NAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|227551673|ref|ZP_03981722.1| DeoR family transcriptional regulator [Enterococcus faecium TX1330]
gi|257884407|ref|ZP_05664060.1| regulatory protein [Enterococcus faecium 1,231,501]
gi|257887191|ref|ZP_05666844.1| regulatory protein [Enterococcus faecium 1,141,733]
gi|257895727|ref|ZP_05675380.1| regulatory protein [Enterococcus faecium Com12]
gi|257898298|ref|ZP_05677951.1| regulatory protein [Enterococcus faecium Com15]
gi|293377664|ref|ZP_06623853.1| transcriptional regulator, DeoR family [Enterococcus faecium PC4.1]
gi|293557132|ref|ZP_06675686.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1039]
gi|294614144|ref|ZP_06694065.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1636]
gi|227179236|gb|EEI60208.1| DeoR family transcriptional regulator [Enterococcus faecium TX1330]
gi|257820245|gb|EEV47393.1| regulatory protein [Enterococcus faecium 1,231,501]
gi|257823245|gb|EEV50177.1| regulatory protein [Enterococcus faecium 1,141,733]
gi|257832292|gb|EEV58713.1| regulatory protein [Enterococcus faecium Com12]
gi|257836210|gb|EEV61284.1| regulatory protein [Enterococcus faecium Com15]
gi|291592994|gb|EFF24582.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1636]
gi|291600701|gb|EFF30999.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1039]
gi|292643664|gb|EFF61785.1| transcriptional regulator, DeoR family [Enterococcus faecium PC4.1]
Length = 250
Score = 41.8 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 49/149 (32%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + + D + + GST E + L G ++ V+ +S
Sbjct: 79 KQQIAKLAAETINDEDVIYLDAGSTTLEMIPFL-----QGKQITVVTNSVQHAANLVDLE 133
Query: 67 IPLHSPEDVSSVDL-SIDGFDEID-----SRLRLIKGYGGALLRE-------------KI 107
+ + ++ G + I+ + G GA + + ++
Sbjct: 134 LATIILGGTIKLSTNAVLGSNAIEQLKHFHFNKAFMGMNGAHIEQGFTTPDPEEAAVKRL 193
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ V+ D +K + P+E
Sbjct: 194 AMKNSEETFVLIDHTKFSQLSFTSVAPLE 222
>gi|293571857|ref|ZP_06682873.1| lactose phosphotransferase system repressor [Enterococcus faecium
E980]
gi|291608111|gb|EFF37417.1| lactose phosphotransferase system repressor [Enterococcus faecium
E980]
Length = 250
Score = 41.4 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 49/149 (32%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + + D + + GST E + L G ++ V+ +S
Sbjct: 79 KQQIAKLAAETINDEDVIYLDAGSTTLEMIPFL-----QGKQITVVTNSVQHAANLVDLE 133
Query: 67 IPLHSPEDVSSVDL-SIDGFDEID-----SRLRLIKGYGGALLRE-------------KI 107
+ + ++ G + I+ + G GA + + ++
Sbjct: 134 LATIILGGTIKLSTNAVLGSNAIEQLKHFHFNKAFMGMNGAHIEQGFATPDPEEAAVKRL 193
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ V+ D +K + P+E
Sbjct: 194 AMKNSEETFVLIDHTKFSQLSFTSVAPLE 222
>gi|146295408|ref|YP_001179179.1| DeoR family transcriptional regulator [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408984|gb|ABP65988.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 253
Score = 41.4 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
Q K A+ A++ + +GM + + TG+T +A + + VI
Sbjct: 77 QEKEKIAKEAVKRIKEGMIIILDTGTTTY----QIARNLKTAQNITVIT 121
>gi|53722496|ref|YP_111481.1| DeoR family transcriptional regulator [Burkholderia pseudomallei
K96243]
gi|167724123|ref|ZP_02407359.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei DM98]
gi|167820271|ref|ZP_02451951.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 91]
gi|167828305|ref|ZP_02459776.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 9]
gi|167898712|ref|ZP_02486113.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 7894]
gi|167915400|ref|ZP_02502491.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 112]
gi|167923241|ref|ZP_02510332.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei BCC215]
gi|226195945|ref|ZP_03791531.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
Pakistan 9]
gi|254185240|ref|ZP_04891829.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1655]
gi|52212910|emb|CAH38946.1| putative DeoR family transcriptional regulator [Burkholderia
pseudomallei K96243]
gi|184215832|gb|EDU12813.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1655]
gi|225931838|gb|EEH27839.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
Pakistan 9]
Length = 252
Score = 41.4 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LAD+
Sbjct: 75 DAKRAIGRRAAEFVPDGASVLLDSGSTVHAVALALADRHR 114
>gi|331266678|ref|YP_004326308.1| transcriptional repressor of fructose operon [Streptococcus oralis
Uo5]
gi|326683350|emb|CBZ00968.1| transcriptional repressor of fructose operon [Streptococcus oralis
Uo5]
Length = 246
Score = 41.4 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIRELVNK-----NITVVTNSIHHAVQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGSVKMATDACIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|302562091|ref|ZP_07314433.1| DeoR family transcriptional regulator [Streptomyces griseoflavus
Tu4000]
gi|302479709|gb|EFL42802.1| DeoR family transcriptional regulator [Streptomyces griseoflavus
Tu4000]
Length = 270
Score = 41.4 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 36/153 (23%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------------------- 39
K+ A + + DG +G+ G+T E L
Sbjct: 78 KQRIATAVAEMIADGDVVGLNGGTTTTEVARALGLRAGGGSTGRGRREAAEASAPMFTVV 137
Query: 40 ------ADKIANGFRVQVIPSSRNTENFCKIHHIP--LHSPEDVSSVDLSIDGFDEIDSR 91
A ++A +V+++ + P + +V +D+++ G D +D R
Sbjct: 138 TNALNIAGELAVRPQVKIVVTGGVARPQTYELVGPLTVGVLNEV-VLDVAVLGVDGVDPR 196
Query: 92 LRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
L L+ ++ A A R IV+ D SK
Sbjct: 197 LGLMTHQEDEASISRLFAERARRVIVVTDASKM 229
>gi|116511597|ref|YP_808813.1| sugar metabolism transcriptional regulator [Lactococcus lactis
subsp. cremoris SK11]
gi|116107251|gb|ABJ72391.1| Transcriptional regulator of sugar metabolism [Lactococcus lactis
subsp. cremoris SK11]
Length = 248
Score = 41.4 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 58/169 (34%), Gaps = 26/169 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+KR A +A + ++DG T+ + +GST LA N + N
Sbjct: 70 DLKRKIAIKAAENILDGDTVMIESGSTCALLAEELAFNRKNVTIITNSVFIANYIRKSDS 129
Query: 65 HHIPLHSPE--------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ L E V + + IDGFD I A+
Sbjct: 130 VKVILLGGEYQNNSQVNVGPLIKKVVDKFYVDKLFIGIDGFDPIRGFRSNDLARSEAI-- 187
Query: 105 EKIIAHAASRFIVIGDESKRVD--FLGRGMLPIEIDQFGVNKTLSALKE 151
++A AA I++ D SK + P EI Q +K +S E
Sbjct: 188 -HVMAAAAKEVIILTDASKFKQNGTVTCFSFP-EISQVFTDKAISKETE 234
>gi|69246836|ref|ZP_00604145.1| regulatory protein, DeoR [Enterococcus faecium DO]
gi|257878467|ref|ZP_05658120.1| regulatory protein [Enterococcus faecium 1,230,933]
gi|257882886|ref|ZP_05662539.1| regulatory protein [Enterococcus faecium 1,231,502]
gi|257889336|ref|ZP_05668989.1| regulatory protein [Enterococcus faecium 1,231,410]
gi|257894348|ref|ZP_05674001.1| regulatory protein [Enterococcus faecium 1,231,408]
gi|258616011|ref|ZP_05713781.1| DeoR family transcriptional regulator [Enterococcus faecium DO]
gi|260560054|ref|ZP_05832232.1| regulatory protein [Enterococcus faecium C68]
gi|261207457|ref|ZP_05922143.1| regulatory protein [Enterococcus faecium TC 6]
gi|289565868|ref|ZP_06446309.1| regulatory protein [Enterococcus faecium D344SRF]
gi|293560004|ref|ZP_06676512.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1162]
gi|293569142|ref|ZP_06680449.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1071]
gi|294621034|ref|ZP_06700226.1| lactose phosphotransferase system repressor [Enterococcus faecium
U0317]
gi|68195069|gb|EAN09531.1| regulatory protein, DeoR [Enterococcus faecium DO]
gi|257812695|gb|EEV41453.1| regulatory protein [Enterococcus faecium 1,230,933]
gi|257818544|gb|EEV45872.1| regulatory protein [Enterococcus faecium 1,231,502]
gi|257825696|gb|EEV52322.1| regulatory protein [Enterococcus faecium 1,231,410]
gi|257830727|gb|EEV57334.1| regulatory protein [Enterococcus faecium 1,231,408]
gi|260073889|gb|EEW62213.1| regulatory protein [Enterococcus faecium C68]
gi|260078348|gb|EEW66053.1| regulatory protein [Enterococcus faecium TC 6]
gi|289162328|gb|EFD10187.1| regulatory protein [Enterococcus faecium D344SRF]
gi|291588189|gb|EFF20030.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1071]
gi|291599348|gb|EFF30373.1| lactose phosphotransferase system repressor [Enterococcus faecium
U0317]
gi|291606092|gb|EFF35518.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1162]
Length = 250
Score = 41.4 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + + D + + GST E + L G ++ V+ +S
Sbjct: 79 KQQIAKSAAETINDEDVIYLDAGSTTLEMIPFL-----QGKQITVVTNSVQHAANLVDLE 133
Query: 67 IPLHSPEDVSSVDL-SIDGFDEID-----SRLRLIKGYGGALLRE-------------KI 107
+ + ++ G + I+ + G GA L + ++
Sbjct: 134 LATIILGGTIKLATNAVLGSNAIEQLKNFHFNKAFMGMNGAHLEQGFTTPDPEEAAVKRL 193
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ V+ D +K + P+E
Sbjct: 194 AMKNSEETFVLIDHTKFNQLSFTSVAPLE 222
>gi|317122667|ref|YP_004102670.1| DeoR family transcriptional regulator [Thermaerobacter marianensis
DSM 12885]
gi|315592647|gb|ADU51943.1| transcriptional regulator, DeoR family [Thermaerobacter marianensis
DSM 12885]
Length = 253
Score = 41.4 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTE 59
+ K A+ A V DG T+ + G+T + L D+ I + + +
Sbjct: 77 EEKERIAQHAASMVPDGATVMLSGGTTTARIVRHLRDRTGLTIITSALNIAAEVVEWESC 136
Query: 60 NFC------KIHHIPLHSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + P V+++ + G D I +R L + +
Sbjct: 137 RLIVCGGLVRQGSYQMIGPAAVATIQQLTADFAFIGVDGITTRHGLTTSDIFEAQVDAAM 196
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPI 135
A+ +V+ D K + P+
Sbjct: 197 IRASRHAVVVADSRKLGRTGVAVIGPV 223
>gi|301794008|emb|CBW36406.1| DeoR family regulatory protein [Streptococcus pneumoniae INV104]
gi|332202734|gb|EGJ16803.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA41317]
Length = 246
Score = 41.4 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNK-----NITVVTNSIHHAAQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGNVKTATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|257877463|ref|ZP_05657116.1| transcriptional regulator [Enterococcus casseliflavus EC20]
gi|257811629|gb|EEV40449.1| transcriptional regulator [Enterococcus casseliflavus EC20]
Length = 251
Score = 41.4 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 28/142 (19%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEF---------------------MILLADKI 43
K A+ AI ++ + + + GST F + LL K
Sbjct: 75 NQKEKLAQEAISHLHEDSIILLD-GSTTNYFVAKKLPEYFSATIITNSPYISIELLKKKN 133
Query: 44 ANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRL-IKGYGGAL 102
+ + + R + L S +D + G + L + +L
Sbjct: 134 ITVINLGGVLAKRQAVSLGIETVQSLDSL----RIDTYVMGVYNFHPEIGLSMHSQEESL 189
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+++K++ + I + + K
Sbjct: 190 VKQKMVE-ISDELIALATKDKL 210
>gi|163791321|ref|ZP_02185734.1| transcriptional regulator, DeoR family protein [Carnobacterium sp.
AT7]
gi|159873400|gb|EDP67491.1| transcriptional regulator, DeoR family protein [Carnobacterium sp.
AT7]
Length = 250
Score = 41.4 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+N A+ A +V DG T+ + GST + L +K
Sbjct: 79 KKNIAKLAASFVEDGDTIFLDAGSTTFFMVPFLKEK 114
>gi|306846264|ref|ZP_07478825.1| DeoR family transcriptional regulator [Brucella sp. BO1]
gi|306273259|gb|EFM55128.1| DeoR family transcriptional regulator [Brucella sp. BO1]
Length = 274
Score = 41.4 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
KR AR A+ +G ++ + GST + + LA + IA Q +
Sbjct: 83 KRAIAREAVALCEEGDSIIINGGSTTFQMVHYLAPRRLQVLTNSFAIAEHLLRQSKSTVI 142
Query: 57 NTENFCKIHHIPLHSPEDVSSV-DLS----IDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ SP D + + G I L +++ + E+ +
Sbjct: 143 VPGGAIYRDQSLILSPFDNDVIRNFYGRRMFMGCQGISP-LGVMESDALIIQSEQKLMGQ 201
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
A +++ D +K + P+
Sbjct: 202 AEELVLMVDSTKFTRRSSLILCPL 225
>gi|256026346|ref|ZP_05440211.1| DNA-binding transcriptional regulator AgaR [Escherichia sp.
4_1_40B]
Length = 187
Score = 41.4 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
MKR+ A+ A++ + G + + +G+T +A + V + + N
Sbjct: 81 MKRSVAKAAVELIQPGHRVLLDSGTTTF----EIARLMRKHTDVIAMTNGMN 128
>gi|126305981|ref|XP_001380266.1| PREDICTED: similar to WD repeat domain 78, [Monodelphis domestica]
Length = 835
Score = 41.4 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 180 IVDAFFGFIPDPQIISGELCNIPGV-IEHGLFINMVDCAIIGTSDGECLVLQ 230
I D I DP I++ PGV I LF DC +IG S+G+ V +
Sbjct: 701 IWDLHTS-ILDPIIVN---NAYPGVKITTVLFAKHTDCILIGDSEGQVTVYE 748
>gi|118588587|ref|ZP_01545995.1| transcriptional regulator [Stappia aggregata IAM 12614]
gi|118438573|gb|EAV45206.1| transcriptional regulator [Stappia aggregata IAM 12614]
Length = 279
Score = 41.4 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 14/144 (9%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
KR A++A++ DG + + G+T + + LA K IA +
Sbjct: 94 KRAIAQKAVELCEDGDAIIINGGTTTFQMVHPLATKRCQVFTNSFPIAEHLLKNSKNTIM 153
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA----LLREKIIAHAA 112
+ + SP + + ++ G A + E+ + A
Sbjct: 154 LSGGVIYREQNIILSPFENDVTRNFYAKRMFMGAQGLGPLGLMEADPLLIQAEQKLIGQA 213
Query: 113 SRFIVIGDESKRVDFLGRGMLPIE 136
+V+ D SK + P+E
Sbjct: 214 DELVVLVDSSKFRARSSLILCPLE 237
>gi|315612895|ref|ZP_07887806.1| lactose PTS family porter repressor [Streptococcus sanguinis ATCC
49296]
gi|315315005|gb|EFU63046.1| lactose PTS family porter repressor [Streptococcus sanguinis ATCC
49296]
Length = 246
Score = 41.4 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIKELVNK-----NITVVTNSIHHAVQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGSVKMATDACIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|296876313|ref|ZP_06900365.1| lactose PTS family porter repressor LacR [Streptococcus
parasanguinis ATCC 15912]
gi|296432603|gb|EFH18398.1| lactose PTS family porter repressor LacR [Streptococcus
parasanguinis ATCC 15912]
Length = 248
Score = 41.4 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++ + + +G T+ +G+G+T L G V ++ +S K
Sbjct: 77 EEKRTIAKKCAELIENGDTVFIGSGTTTDFIGDYL-----EGKDVSIVTNSLPIFEKLKD 131
Query: 65 HHIPLHSP 72
Sbjct: 132 FPNYDLIL 139
>gi|242371862|ref|ZP_04817436.1| sugar metabolism transcriptional repressor [Staphylococcus
epidermidis M23864:W1]
gi|242350369|gb|EES41970.1| sugar metabolism transcriptional repressor [Staphylococcus
epidermidis M23864:W1]
Length = 255
Score = 41.4 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + DG T+ +G G+T LA++I + + + K
Sbjct: 82 EEKRYIAKKAVELIEDGDTIFLGPGTTV----QKLAEEINHHTLTVITNCLPVFKILMKK 137
Query: 65 HHIPL 69
+
Sbjct: 138 QSLHF 142
>gi|149189906|ref|ZP_01868185.1| glycerol-3-phosphate regulon repressor [Vibrio shilonii AK1]
gi|148836221|gb|EDL53179.1| glycerol-3-phosphate regulon repressor [Vibrio shilonii AK1]
Length = 254
Score = 41.4 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A++ ++ + DG TL +G G+T + +A+K+ N ++V+ ++ + +
Sbjct: 79 KQIIAKQVVELIPDGCTLFLGIGTT----IAAIAEKLGNQKELRVVTNNFQAAHILSQYD 134
>gi|294635053|ref|ZP_06713569.1| glucitol operon repressor [Edwardsiella tarda ATCC 23685]
gi|291091551|gb|EFE24112.1| glucitol operon repressor [Edwardsiella tarda ATCC 23685]
Length = 257
Score = 41.4 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 45/137 (32%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSR----- 56
K A RA V DG TL + +GST + + L + + N + +
Sbjct: 81 KSRIAARAAALVQDGDTLILDSGSTTAQIVPFLKARRDLVVMTNALNIACELTGYEQVEV 140
Query: 57 ---------NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
N+ + + L +DGFD G A L ++
Sbjct: 141 LVLGGNMRPNSYSLYGHAAEQQLRQYHFDRLFLGVDGFD--LECGITTPHRGEAQLN-RV 197
Query: 108 IAHAASRFIVIGDESKR 124
+ AS I + D SK
Sbjct: 198 MCDVASEIIAVVDASKF 214
>gi|88800142|ref|ZP_01115711.1| glycerol-3-phosphate regulon repressor [Reinekea sp. MED297]
gi|88777123|gb|EAR08329.1| glycerol-3-phosphate regulon repressor [Reinekea sp. MED297]
Length = 256
Score = 41.4 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 18/146 (12%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTEN 60
+K+ AR+ + + DG + +G G+T L++ + N R S
Sbjct: 78 LKQQIARKVAEVIPDGACVFLGIGTTVSYAARALSEHQDMRILTNNLRAAEHLSESPHHE 137
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE------------KII 108
+ +DV +L+ FD + +I K I
Sbjct: 138 VFVSGGRLRPADQDVVG-ELTTRFFDGFYADYGVIGVGALHRTFGLMEYNPFEADVSKAI 196
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLP 134
A + +++ D+SK LP
Sbjct: 197 ARNCRQLVLVADDSKWQRNATVKTLP 222
>gi|306829238|ref|ZP_07462428.1| lactose PTS family porter repressor [Streptococcus mitis ATCC 6249]
gi|304428324|gb|EFM31414.1| lactose PTS family porter repressor [Streptococcus mitis ATCC 6249]
Length = 246
Score = 41.4 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 49/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q KR A++A ++ + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKRLLAQKAASFIKEKDVIFIDAGTTTAFLIKELVNK-----EITVVTNSIHHAVQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGGVKMTTDASIGGVALNQINQLHFDRAFIGMNGVDDGYYSTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|295132635|ref|YP_003583311.1| transcriptional regulator GlpR family protein [Zunongwangia
profunda SM-A87]
gi|294980650|gb|ADF51115.1| transcriptional regulator, GlpR family protein [Zunongwangia
profunda SM-A87]
Length = 250
Score = 41.4 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 26/139 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN-TENFCKIH 65
K + +++A + + D ++ + +G+T LA I N + VI SS N
Sbjct: 76 KSDISKKAAELIKDNDSIMIASGTTV----QQLARSITNKGSLNVITSSLNVALELLNHQ 131
Query: 66 HIPLHSPE-------------------DVSSVDLSIDGFDEIDSRL-RLIKGYGGALLRE 105
+I + + S L G D ID ALL +
Sbjct: 132 NIQVIQLGGNLRHSSSSVTGHYAQHILEHISCSLLFLGVDGIDLDYGCTTTSLEEALLNQ 191
Query: 106 KIIAHAASRFIVIGDESKR 124
K++ A+ R I++ D SK
Sbjct: 192 KMME-ASQRTIILADSSKF 209
>gi|215488452|ref|YP_002330883.1| DNA-binding transcriptional regulator AgaR [Escherichia coli
O127:H6 str. E2348/69]
gi|312968528|ref|ZP_07782737.1| putative aga operon transcriptional repressor [Escherichia coli
2362-75]
gi|215266524|emb|CAS10963.1| DNA-binding transcriptional dual regulator [Escherichia coli
O127:H6 str. E2348/69]
gi|312286746|gb|EFR14657.1| putative aga operon transcriptional repressor [Escherichia coli
2362-75]
Length = 274
Score = 41.4 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 22/138 (15%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKE-------------------FMILLADKIANG 46
MKR+ A+ A++ + G + + +G+T E L +
Sbjct: 92 MKRSVAKAAVELIQPGHRVILDSGTTTFEIACLMRKHTDVIAMTNGMNVANALLEAEGVE 151
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ R +++F + L +D D R A L +
Sbjct: 152 LLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEARLNRR 209
Query: 107 IIAHAASRFIVIGDESKR 124
+ A R IV+ D SK
Sbjct: 210 MCE-VAERIIVVTDSSKF 226
>gi|300928788|ref|ZP_07144300.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300463220|gb|EFK26713.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
Length = 219
Score = 41.4 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
MKR+ A+ A++ + G + + +G+T +A + V + + N
Sbjct: 92 MKRSVAKAAVELIQPGHRVLLDSGTTTF----EIARLMRKHTDVIAMTNGMN 139
>gi|332161499|ref|YP_004298076.1| DNA-binding transcriptional regulator AgaR [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318605487|emb|CBY26985.1| transcriptional repressor of aga operon [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665729|gb|ADZ42373.1| DNA-binding transcriptional regulator AgaR [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330864017|emb|CBX74097.1| putative aga operon transcriptional repressor [Yersinia
enterocolitica W22703]
Length = 269
Score = 41.4 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+KR+ AR A + G + + +G+T +A + N V + + N N
Sbjct: 92 LKRSIARVAADLIKPGHRVILDSGTTTC----EIARHMRNHKEVIAMTNGMNVANSLLDA 147
Query: 66 HIPLHSPE----DVSSVDLSIDGFDEIDSRLRL---IKGYGGALLRE------------- 105
S+ D D+ G L
Sbjct: 148 EGVELLMTGGHLRRQSLSFYGDQADQSLQNYHFDMLFLGVDAISLERGVSTHNEDEARLN 207
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A R IV+ D SK
Sbjct: 208 RRMCEVAERIIVVTDSSKF 226
>gi|161519995|ref|YP_001583422.1| DeoR family transcriptional regulator [Burkholderia multivorans
ATCC 17616]
gi|189353823|ref|YP_001949450.1| DeoR family transcriptional regulator [Burkholderia multivorans
ATCC 17616]
gi|160344045|gb|ABX17130.1| transcriptional regulator, DeoR family [Burkholderia multivorans
ATCC 17616]
gi|189337845|dbj|BAG46914.1| DeoR family transcriptional regulator [Burkholderia multivorans
ATCC 17616]
Length = 252
Score = 41.4 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
KR RRA ++V DG ++ + +GST + LAD+ NG
Sbjct: 75 DAKRAIGRRAAEFVPDGASVLIDSGSTPHAVALALADRHRLSVYTNDWRTALVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGDCTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 194 MIAAAGTAIIVADHSKF 210
>gi|269793470|ref|YP_003312925.1| DeoR family transcriptional regulator [Sanguibacter keddieii DSM
10542]
gi|269095655|gb|ACZ20091.1| transcriptional regulator, DeoR family [Sanguibacter keddieii DSM
10542]
Length = 252
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 26/164 (15%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
A + K RA + V GMT+ + G+T + L + + + T
Sbjct: 73 ATESKERVGARAARLVEPGMTVLLDGGTTCLAVVRALPRDLR-----CTVVTHSPTVAVA 127
Query: 63 KIHHIPLHSPEDVSSV---------------------DLSIDGFDEIDSRLRLIKGYGGA 101
+ + + + DL + G + L G
Sbjct: 128 LLPYEDIEVLVLGGRLFRHSAVTSGAAAVEAAAAVSCDLFLLGVTGVHPEEGLTTGDADE 187
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKT 145
++ +A ++ + + E K +LP+E V T
Sbjct: 188 AAMKRALARRSAETVALASEEKVGAVSRFRVLPLEEVTAVVADT 231
>gi|320103165|ref|YP_004178756.1| DeoR family transcriptional regulator [Isosphaera pallida ATCC
43644]
gi|319750447|gb|ADV62207.1| transcriptional regulator, DeoR family [Isosphaera pallida ATCC
43644]
Length = 281
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 16/143 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF--------RVQVIPSSRNT 58
KR R A + DG ++ + G+T E LA + + P +
Sbjct: 79 KRAIGRAAADLIEDGESVLIDGGTTTYEVARALAGRPVQILTNSLPIAQLITAAPGRASD 138
Query: 59 ENFCKIHHIP----LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL----REKIIAH 110
P P+ ++ ++ + + +G + L E+ +
Sbjct: 139 LILIGGFVYPRTGVALGPQAIAQMNALKVDRAVLGAGGVTSEGVYNSNLLLVETERAMMA 198
Query: 111 AASRFIVIGDESKRVDFLGRGML 133
A+ +++ D SK +
Sbjct: 199 CAAEVVIVADHSKLNKTALSWLC 221
>gi|255530594|ref|YP_003090966.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
gi|255343578|gb|ACU02904.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
Length = 247
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
A + K+ AR+A++ + DGMT+ G G T LA I +
Sbjct: 72 AKEKKKEIARKALELIEDGMTILAGGG-TVML---ELAKMIPEDLKGTFFT 118
>gi|332685734|ref|YP_004455508.1| DeoR family transcriptional regulator [Melissococcus plutonius ATCC
35311]
gi|332369743|dbj|BAK20699.1| transcriptional regulator, DeoR family [Melissococcus plutonius
ATCC 35311]
Length = 247
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 23/140 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD------------------KIANG 46
++KR A+ A V DG ++ + +G+T LA + A
Sbjct: 70 ELKRKIAQTAASLVKDGDSVMIESGATCTLLAEELAYHKDEVTIITNSCFIAAYIRKAKN 129
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPED--VSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ ++ E+ + + ++ V + + IDGFDE A
Sbjct: 130 VNIILLGGEYQKESQVNVGPLVKKYVDEFYVDKLFVGIDGFDEKRGFTSNNLARCDA--- 186
Query: 105 EKIIAHAASRFIVIGDESKR 124
K + AA I++ D +K
Sbjct: 187 SKALVQAARETIILTDSTKF 206
>gi|297567425|ref|YP_003686397.1| DeoR family transcriptional regulator [Meiothermus silvanus DSM
9946]
gi|296851874|gb|ADH64889.1| transcriptional regulator, DeoR family [Meiothermus silvanus DSM
9946]
Length = 257
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 15/151 (9%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANGFR 48
KR A A++ V G TL + G+T E LL A ++ + +
Sbjct: 73 QYAQKRAIAEAAVRLVQPGYTLYLSPGTTTTEIARLLPNENLTVVTNSLPIAQELMHATQ 132
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSS-VDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
++V+ + + + + P V+L+ G +D L +
Sbjct: 133 LEVVLTGGSVRRYAEALVGPAAEASLAQVFVNLAFVGITGMDPVGGLTVYSESEARVLQA 192
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+ +A + I++ D SK +G + P+E+
Sbjct: 193 VLRSARKTILVADSSKWGKVMGPQVAPVEMV 223
>gi|212696339|ref|ZP_03304467.1| hypothetical protein ANHYDRO_00876 [Anaerococcus hydrogenalis DSM
7454]
gi|212676617|gb|EEB36224.1| hypothetical protein ANHYDRO_00876 [Anaerococcus hydrogenalis DSM
7454]
Length = 249
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 18/149 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-----ADKIANGFRVQVIPSSRNTE 59
K A++AI V + T+ + +G+T+ E L I N F + S +T
Sbjct: 77 DKKTIIAQKAIDLVEENDTIALDSGTTSFELCKKLTSFDKLTLIINDFAIANFLSENSTF 136
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL------------LREKI 107
+ + + ++ D I+ I L +K
Sbjct: 137 KLIFVGGLIGRDINSTNGPK-ALSFLDNINCDKAFISCESFDLKKGFSTFDENQAAFKKR 195
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + I++ D SK IE
Sbjct: 196 LMETSKTKIMLLDSSKFDKVSSFTFSKIE 224
>gi|225858674|ref|YP_002740184.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae 70585]
gi|225720331|gb|ACO16185.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae 70585]
Length = 246
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K V V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNK-----NVTVVTNSIHHAAQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGNVKTATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|90578481|ref|ZP_01234292.1| transcriptional regulator of sugar metabolism [Vibrio angustum S14]
gi|90441567|gb|EAS66747.1| transcriptional regulator of sugar metabolism [Vibrio angustum S14]
Length = 258
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A V G + + +GST ++ L A +AN ++V
Sbjct: 80 KEKLGEYAASLVQSGDKIIIDSGSTTEQITHYLNPKHNLVVMTNGINIAYHLANQENIEV 139
Query: 52 IPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ S N+ + + + + L +DGFD++D +G +
Sbjct: 140 MVSGGVMRHNSYSLHGTSGEEFLAGFRFNKLFLGVDGFDKVDGITTPHQGEANI---NRK 196
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I + D SK
Sbjct: 197 MVEAAQTVIAVTDSSKF 213
>gi|146298436|ref|YP_001193027.1| DeoR family transcriptional regulator [Flavobacterium johnsoniae
UW101]
gi|146152854|gb|ABQ03708.1| transcriptional regulator, DeoR family [Flavobacterium johnsoniae
UW101]
Length = 258
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 22/139 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMI-------------------LLADKIAN 45
+ K+ A++ + + DGM L +G G+T +EF+ L DK
Sbjct: 82 ESKQIIAQKTLGLLRDGMVLLIGGGTTIREFIRLIPNDLSLTIFTVTVLSAVELLDKPNV 141
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ S ++ + V + L + D + +
Sbjct: 142 KIIMIGGSISSYSQMCVSGDVYNQLANIKVDLLILGTNALDI---EGGFSDSDWETVQVK 198
Query: 106 KIIAHAASRFIVIGDESKR 124
K + A+ + ++ K
Sbjct: 199 KAMIQASEKTAILTISEKL 217
>gi|330812732|ref|YP_004357194.1| transcriptional regulator, DeoR family [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327380840|gb|AEA72190.1| putative transcriptional regulator, DeoR family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 258
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIANGFR------- 48
K AR A++ + + + + +GST + L +AN
Sbjct: 78 KLAIARAAVKRIREHARIIIDSGSTTAAMIPQLGQQPGLVVMTNSLHVANALSELEHEPV 137
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A IV+ + K + LP
Sbjct: 194 VMAEVTREVIVMVEADKIGRKIPNLELP 221
>gi|293416926|ref|ZP_06659563.1| conserved hypothetical protein [Escherichia coli B185]
gi|300937945|ref|ZP_07152730.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|291431502|gb|EFF04487.1| conserved hypothetical protein [Escherichia coli B185]
gi|300457042|gb|EFK20535.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
Length = 232
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 42/139 (30%), Gaps = 26/139 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A++A+ + + + + G T L I + V+ ++ + +
Sbjct: 76 KVKLAKKAVHLIKENSVILIDGG-TTNY---ELVKLIPKDLKCTVVSNNIPILHLLSDYQ 131
Query: 67 --------------------IPLHSPEDVSSVDLSIDGFDEIDSRL-RLIKGYGGALLRE 105
+ D+ G +DS + I G ++
Sbjct: 132 NVEVIGLGGRLYKNSLVLIGAETIRELEAIRPDIYFMGVAHVDSEVGVTIPGLDECYTKQ 191
Query: 106 KIIAHAASRFIVIGDESKR 124
K +A ++ ++ E K
Sbjct: 192 K-MAQVSNEVAILVTEEKL 209
>gi|328957588|ref|YP_004374974.1| uncharacterized HTH-type transcriptional regulator FruR
[Carnobacterium sp. 17-4]
gi|328673912|gb|AEB29958.1| uncharacterized HTH-type transcriptional regulator FruR
[Carnobacterium sp. 17-4]
Length = 250
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 26/138 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A+ A +V DG T+ + GST + L +K ++++ ++ +
Sbjct: 79 KEKIAKLAASFVEDGDTIFLDAGSTTFFMVPFLKEK-----NIRIVTNAVQHALLLANQN 133
Query: 67 IP--------------LHSPEDVSSVDLS-----IDGFDEIDSRL-RLIKGYGGALLREK 106
+ V + G + ID A ++++
Sbjct: 134 NDVLLIGGKLKNTTQAIVGTTSVEQLSRYRFNKSFLGMNGIDKDYGFTTPDPEEANVKQQ 193
Query: 107 IIAHAASRFIVIGDESKR 124
+++ +I + DE+K
Sbjct: 194 AFMNSSKTYI-LADETKF 210
>gi|163940742|ref|YP_001645626.1| DeoR family transcriptional regulator [Bacillus weihenstephanensis
KBAB4]
gi|229012263|ref|ZP_04169440.1| Transcriptional regulator, DeoR [Bacillus mycoides DSM 2048]
gi|163862939|gb|ABY43998.1| transcriptional regulator, DeoR family [Bacillus weihenstephanensis
KBAB4]
gi|228748899|gb|EEL98747.1| Transcriptional regulator, DeoR [Bacillus mycoides DSM 2048]
Length = 262
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 22/142 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A + V D + + G+T + + + DK IP+ +
Sbjct: 80 EEKRKIAMEASKLVEDNDIIAIEIGTTTMQILDYIHDKKNLTILTNSIPAVNKIIELKEQ 139
Query: 65 HHIPLHSPE----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ D +V+ D I L Y
Sbjct: 140 YDSFDCRLIVIGGILNTNSLALSGEMTLNYLDHFTVNKLFASCDGISLEKELTCSYIEDA 199
Query: 103 LREKIIAHAASRFIVIGDESKR 124
K + + A + +++ DESK
Sbjct: 200 QIYKQLKNNAKQVVMMADESKF 221
>gi|328955013|ref|YP_004372346.1| DeoR family transcriptional regulator [Coriobacterium glomerans
PW2]
gi|328455337|gb|AEB06531.1| transcriptional regulator, DeoR family [Coriobacterium glomerans
PW2]
Length = 259
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
K+ A+RA++++ G T+ + G+T LA+++AN + V+ ++
Sbjct: 76 DAAKKAIAQRAVKFIEPGDTIYLDYGTTTY----ALAEQLANSTGLTVVTNTI 124
>gi|313884801|ref|ZP_07818553.1| transcriptional regulator, DeoR family [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619492|gb|EFR30929.1| transcriptional regulator, DeoR family [Eremococcus coleocola
ACS-139-V-Col8]
Length = 171
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCKI 64
K A A V DG + +G+GSTA LA K+ + V S +
Sbjct: 28 AKNEVAEIAASMVEDGDFIAIGSGSTAFL----LASKLHGKRDLTVATNSVYVAYELMQD 83
Query: 65 HHIPL 69
I
Sbjct: 84 KTINF 88
>gi|322385797|ref|ZP_08059441.1| lactose PTS family porter repressor [Streptococcus cristatus ATCC
51100]
gi|321270535|gb|EFX53451.1| lactose PTS family porter repressor [Streptococcus cristatus ATCC
51100]
Length = 248
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ K+ A++ + +G T+ +G+G+T L G + ++ +S
Sbjct: 73 MLNIEEKKLIAKKCADLIAEGDTVFIGSGTTTDFIGDYL-----EGKNISIVTNSLPIFE 127
Query: 61 FCKIHHIPLHSP 72
K +
Sbjct: 128 KLKDYPNFDLIL 139
>gi|218131948|ref|ZP_03460752.1| hypothetical protein BACEGG_03571 [Bacteroides eggerthii DSM 20697]
gi|317474448|ref|ZP_07933722.1| deoR family Bacterial regulatory protein [Bacteroides eggerthii
1_2_48FAA]
gi|217985824|gb|EEC52164.1| hypothetical protein BACEGG_03571 [Bacteroides eggerthii DSM 20697]
gi|316909129|gb|EFV30809.1| deoR family Bacterial regulatory protein [Bacteroides eggerthii
1_2_48FAA]
Length = 254
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 24/142 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF- 61
K+ A A + + ++ + +GST +LA+++ + V+ +S T
Sbjct: 76 QTNEKKRIAIAAAKLIEKNDSIIIASGSTV----HMLAEQLTPIEHLIVVTASLKTAILL 131
Query: 62 -------------------CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
C + + + G D ID +
Sbjct: 132 NAVNNIEVIQLGGTVRKNSCSVIGDYTSQLFEQITCSKLFLGVDGIDLEHGITNSNIAEA 191
Query: 103 LREKIIAHAASRFIVIGDESKR 124
K + A+ R I++ D SK
Sbjct: 192 NLNKKMIEASLRTIILADSSKF 213
>gi|308233495|ref|ZP_07664232.1| putative DeoR-type transcriptional regulator [Atopobium vaginae DSM
15829]
Length = 248
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 46/156 (29%), Gaps = 24/156 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----KIANGFRVQVIPSSRNTENF 61
K+ A A++ V D T+ + +GST + +I + + +
Sbjct: 72 KKRIAAEAVKLVEDNETIMIESGSTCALLAEAICRHRHNVRIITNSCFIANYTRKYSSCQ 131
Query: 62 CKIHHIPLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ +V+ V G D D L + + +
Sbjct: 132 VILLGGIYQQNSEVTVGPLLKEIIKLFHVKTLFAGTDGFDETLGFMGVDMMRCEVVQYMC 191
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKT 145
+A +V+ D SK + QF N+
Sbjct: 192 DSADHLVVLTDSSKFSKRSL-------VHQFSFNQV 220
>gi|169827219|ref|YP_001697377.1| putative HTH-type transcriptional regulator [Lysinibacillus
sphaericus C3-41]
gi|168991707|gb|ACA39247.1| Putative HTH-type transcriptional regulator [Lysinibacillus
sphaericus C3-41]
Length = 260
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR AR A + + DG T+ + TG+T L
Sbjct: 77 QKEAKRQIARMAAKRIGDGDTIAIDTGTTTVHIADFL 113
>gi|167840098|ref|ZP_02466782.1| transcriptional regulator, DeoR family protein [Burkholderia
thailandensis MSMB43]
Length = 252
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ KR RRA ++V DG ++ + +GST + L D+
Sbjct: 75 EAKRAIGRRAAEFVPDGASVLLDSGSTVHAVALALVDRHR 114
>gi|83942408|ref|ZP_00954869.1| glycerol-3-phosphate regulon repressor [Sulfitobacter sp. EE-36]
gi|83846501|gb|EAP84377.1| glycerol-3-phosphate regulon repressor [Sulfitobacter sp. EE-36]
Length = 255
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 16/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---ADKIANGFRVQVIPSSRNTENF 61
Q K+ A + DG + +GTG+T + L D + + + +N
Sbjct: 79 QEKQRIALAVKNLIPDGARVALGTGTTVEHCARFLSSHKDLFVATNSIHAVCALQNAAGV 138
Query: 62 CKIHHIPLHSPEDVSSVDLSIDG------FDEIDSRLRLIKGYGGAL-------LREKII 108
D+ + + D + G G + L K I
Sbjct: 139 MVELAGGNVRMRDLDLIGAAALAFFAGYRMDYAVFSCGGLSGSGAVMDYNSDEVLARKAI 198
Query: 109 AHAASRFIVIGDESK 123
A A I++ D+ K
Sbjct: 199 AGCAKTTILVADQGK 213
>gi|229826996|ref|ZP_04453065.1| hypothetical protein GCWU000182_02380 [Abiotrophia defectiva ATCC
49176]
gi|229788614|gb|EEP24728.1| hypothetical protein GCWU000182_02380 [Abiotrophia defectiva ATCC
49176]
Length = 270
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 17/135 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQV-------- 51
K A+RA + D M + + + ST F+ L I NG +
Sbjct: 96 DKKMALAKRARTLLQDNMVIFLDSSSTVSLFIPYLKPYSNLTVITNGINIASLLNNYPNI 155
Query: 52 ---IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
I I + D++ I + +G L +K +
Sbjct: 156 KCYICPGVLKNKSLSIIGEYASAFISNFRADIAFISSKAIT-NQGIFEGDDSQALCKKEM 214
Query: 109 AHAASRFIVIGDESK 123
A + +++ D SK
Sbjct: 215 IKNAYKSVLLLDNSK 229
>gi|186470631|ref|YP_001861949.1| DeoR family transcriptional regulator [Burkholderia phymatum
STM815]
gi|184196940|gb|ACC74903.1| transcriptional regulator, DeoR family [Burkholderia phymatum
STM815]
Length = 256
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 16/148 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA------NGFRVQVI---P 53
+ K + A+ A +V+DG T+ + G+T L+ + A N V + P
Sbjct: 76 QREQKESIAQAAAAHVLDGDTVLLDGGTTCAALARHLSTREALHVVTNNLLAVTALANAP 135
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDL-------SIDGFDEIDSRLRLIKGYGGALLREK 106
R T ++ + + ++ + L + G D + + L + ++
Sbjct: 136 GVRLTLIGGELRGSSMSTLGPLAELILSRLTVDRAFLGADGVVAGFGLCEASAQQAYLKE 195
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
I A+ IV+ D K + P
Sbjct: 196 CIVSRAAEIIVLADSDKLGRARQQHWTP 223
>gi|83953628|ref|ZP_00962349.1| transcriptional regulator of sugar metabolism [Sulfitobacter sp.
NAS-14.1]
gi|83841573|gb|EAP80742.1| transcriptional regulator of sugar metabolism [Sulfitobacter sp.
NAS-14.1]
Length = 255
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 16/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---ADKIANGFRVQVIPSSRNTENF 61
Q K+ A + DG + +GTG+T + L D + + + +N
Sbjct: 79 QEKQRIALAVKNLIPDGARVALGTGTTVEHCARFLSSHKDLFVATNSIHAVCALQNAAGV 138
Query: 62 CKIHHIPLHSPEDVSSVDLSIDG------FDEIDSRLRLIKGYGGAL-------LREKII 108
D+ + + D + G G + L K I
Sbjct: 139 MVELAGGNVRMRDLDLIGAAALAFFAGYRMDYAVFSCGGLSGSGAVMDYNSDEVLARKAI 198
Query: 109 AHAASRFIVIGDESK 123
A A I++ D+ K
Sbjct: 199 AGCAKTTILVADQGK 213
>gi|304395925|ref|ZP_07377807.1| transcriptional regulator, DeoR family [Pantoea sp. aB]
gi|304356294|gb|EFM20659.1| transcriptional regulator, DeoR family [Pantoea sp. aB]
Length = 249
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 26/162 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGF 47
K+ A++A+ + G + + G+T+ E + L A +A+
Sbjct: 73 QTASKQVIAQKAVSLIQPGQIVLIDGGTTSAELVRQLPTTLSFTAVTHSPSVALALADHP 132
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGALLRE 105
RV+VI + + E ++ ++ L G + L G +
Sbjct: 133 RVEVILIGGQLYK-HSVVALGAAMLESINRINADLFFMGVTGVHPAAGLTTGNFEEATVK 191
Query: 106 KIIAHAASRFIVIGDESKR--------VDFLGRGMLPIEIDQ 139
+ +A A+ +V+ K D L +E +
Sbjct: 192 RALAGRAAETVVLASAEKLNSASAFAIGDLSLASTLVVETEP 233
>gi|328943745|ref|ZP_08241210.1| DeoR family transcriptional regulator [Atopobium vaginae DSM 15829]
gi|327491714|gb|EGF23488.1| DeoR family transcriptional regulator [Atopobium vaginae DSM 15829]
Length = 250
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 46/156 (29%), Gaps = 24/156 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----KIANGFRVQVIPSSRNTENF 61
K+ A A++ V D T+ + +GST + +I + + +
Sbjct: 74 KKRIAAEAVKLVEDNETIMIESGSTCALLAEAICRHRHNVRIITNSCFIANYTRKYSSCQ 133
Query: 62 CKIHHIPLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ +V+ V G D D L + + +
Sbjct: 134 VILLGGIYQQNSEVTVGPLLKEIIKLFHVKTLFAGTDGFDETLGFMGVDMMRCEVVQYMC 193
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKT 145
+A +V+ D SK + QF N+
Sbjct: 194 DSADHLVVLTDSSKFSKRSL-------VHQFSFNQV 222
>gi|167746170|ref|ZP_02418297.1| hypothetical protein ANACAC_00866 [Anaerostipes caccae DSM 14662]
gi|167654685|gb|EDR98814.1| hypothetical protein ANACAC_00866 [Anaerostipes caccae DSM 14662]
Length = 254
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 14/81 (17%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ AR A YV +G + + +GST LA + + ++VI +
Sbjct: 76 EEEKKAIARIARAYVKEGDAVILDSGSTTL----ELALLLKDAKNIKVITNDLQ------ 125
Query: 64 IHHIPLHSPEDVSSVDLSIDG 84
++ ++L I G
Sbjct: 126 ----IALELQENPWIELYIVG 142
>gi|223932298|ref|ZP_03624301.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
gi|223898979|gb|EEF65337.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
Length = 254
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 20/148 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAK-------------------EFMILLADKIANGF 47
KR A A ++ GM + + + +T L++ + +
Sbjct: 79 KRFIANLAKDFIRSGMCIYLDSSTTVYELCPHLAELDNLIIFTNGLHTAQTLSETVRDNS 138
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
++ + ++ +++ +S D ++DL+ ID + A+ +K
Sbjct: 139 KIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGIDDQYVYEASLSQAI-SKKS 197
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPI 135
I A I++ D SK + P+
Sbjct: 198 IIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|283788227|ref|YP_003368092.1| galactitol utilisation operon repressor [Citrobacter rodentium
ICC168]
gi|282951681|emb|CBG91381.1| galactitol utilisation operon repressor [Citrobacter rodentium
ICC168]
Length = 257
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A V +GMT+ + +GST L K
Sbjct: 84 KKRIAQAAAAMVNEGMTVILDSGSTTLLIAEALNRK 119
>gi|149002411|ref|ZP_01827345.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP14-BS69]
gi|237650529|ref|ZP_04524781.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CCRI 1974]
gi|237822626|ref|ZP_04598471.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CCRI 1974M2]
gi|147759348|gb|EDK66340.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP14-BS69]
gi|332076158|gb|EGI86624.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA41301]
Length = 246
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K V V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNK-----NVTVVTNSIHHAAQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGNVKTATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|15902822|ref|NP_358372.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae R6]
gi|116515565|ref|YP_816256.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae D39]
gi|148988297|ref|ZP_01819744.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP6-BS73]
gi|148993688|ref|ZP_01823135.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP9-BS68]
gi|149007180|ref|ZP_01830844.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP18-BS74]
gi|149010493|ref|ZP_01831864.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP19-BS75]
gi|149026356|ref|ZP_01836511.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP23-BS72]
gi|168484760|ref|ZP_02709705.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC1873-00]
gi|168490309|ref|ZP_02714508.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae SP195]
gi|168490967|ref|ZP_02715110.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC0288-04]
gi|168493029|ref|ZP_02717172.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC3059-06]
gi|168575533|ref|ZP_02721469.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae MLV-016]
gi|169833788|ref|YP_001694327.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae Hungary19A-6]
gi|182683794|ref|YP_001835541.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae CGSP14]
gi|194398234|ref|YP_002037510.1| transcriptional repressor fructose operon [Streptococcus pneumoniae
G54]
gi|221231653|ref|YP_002510805.1| DeoR family regulatory protein [Streptococcus pneumoniae ATCC
700669]
gi|225854382|ref|YP_002735894.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae JJA]
gi|225856540|ref|YP_002738051.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae P1031]
gi|303255286|ref|ZP_07341357.1| DeoR family regulatory protein [Streptococcus pneumoniae BS455]
gi|307067473|ref|YP_003876439.1| sugar metabolism transcriptional regulator [Streptococcus
pneumoniae AP200]
gi|307127575|ref|YP_003879606.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae 670-6B]
gi|15458374|gb|AAK99582.1| Transcriptional repressor of the fructose operon [Streptococcus
pneumoniae R6]
gi|116076141|gb|ABJ53861.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae D39]
gi|147761218|gb|EDK68185.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP18-BS74]
gi|147764974|gb|EDK71903.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP19-BS75]
gi|147925978|gb|EDK77052.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP6-BS73]
gi|147927768|gb|EDK78791.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP9-BS68]
gi|147929318|gb|EDK80317.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP23-BS72]
gi|168996290|gb|ACA36902.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae Hungary19A-6]
gi|172042051|gb|EDT50097.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC1873-00]
gi|182629128|gb|ACB90076.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae CGSP14]
gi|183571342|gb|EDT91870.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae SP195]
gi|183574773|gb|EDT95301.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC0288-04]
gi|183577124|gb|EDT97652.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC3059-06]
gi|183578431|gb|EDT98959.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae MLV-016]
gi|194357901|gb|ACF56349.1| transcriptional repressor fructose operon [Streptococcus pneumoniae
G54]
gi|220674113|emb|CAR68632.1| DeoR family regulatory protein [Streptococcus pneumoniae ATCC
700669]
gi|225722362|gb|ACO18215.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae JJA]
gi|225725706|gb|ACO21558.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae P1031]
gi|301799866|emb|CBW32441.1| DeoR family regulatory protein [Streptococcus pneumoniae OXC141]
gi|301801701|emb|CBW34407.1| DeoR family regulatory protein [Streptococcus pneumoniae INV200]
gi|302597755|gb|EFL64830.1| DeoR family regulatory protein [Streptococcus pneumoniae BS455]
gi|306409010|gb|ADM84437.1| Transcriptional regulators of sugar metabolism [Streptococcus
pneumoniae AP200]
gi|306484637|gb|ADM91506.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae 670-6B]
gi|327390227|gb|EGE88570.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA04375]
gi|332073205|gb|EGI83684.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA17570]
gi|332077288|gb|EGI87750.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA17545]
gi|332201337|gb|EGJ15407.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA47368]
gi|332204878|gb|EGJ18943.1| deoR-like helix-turn-helix domain protein [Streptococcus pneumoniae
GA47901]
Length = 246
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K V V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNK-----NVTVVTNSIHHAAQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGNVKTATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|312961498|ref|ZP_07775999.1| transcriptional regulator, DeoR family [Pseudomonas fluorescens
WH6]
gi|311284177|gb|EFQ62757.1| transcriptional regulator, DeoR family [Pseudomonas fluorescens
WH6]
Length = 261
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
+ KR A+RA + V DG + +GST +A + + R+ V+ +S
Sbjct: 83 NEAKRRLAQRAAERVEDGQIVLFDSGSTTL----QIAQSLPHSIRLTVVTTS 130
>gi|307265719|ref|ZP_07547271.1| transcriptional regulator, DeoR family [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919233|gb|EFN49455.1| transcriptional regulator, DeoR family [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 254
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI 52
K+ A+ A+ + DG +L + +G+T ++ G +V +
Sbjct: 82 KKKIAKMALDLIEDGDSLFLDSGTTIYYLAKIIGS--KKGLKVVTV 125
>gi|229018309|ref|ZP_04175180.1| Transcriptional regulator, DeoR [Bacillus cereus AH1273]
gi|229024537|ref|ZP_04180983.1| Transcriptional regulator, DeoR [Bacillus cereus AH1272]
gi|228736761|gb|EEL87310.1| Transcriptional regulator, DeoR [Bacillus cereus AH1272]
gi|228742976|gb|EEL93105.1| Transcriptional regulator, DeoR [Bacillus cereus AH1273]
Length = 262
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 22/142 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A + V D + + G+T + + + DK IP+ +
Sbjct: 80 EEKRKIAMEASKLVEDNDIIAIEIGTTTMQILDYIHDKKNLTILTNSIPAVNKIIELKEQ 139
Query: 65 HHIPLHSPE----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ D +V+ D I L Y
Sbjct: 140 YDSFDCRLIVIGGILNTNSLALSGEMTLNYLDHFTVNKLFASCDGISLEKELTCSYIEDA 199
Query: 103 LREKIIAHAASRFIVIGDESKR 124
K + + A + +++ DESK
Sbjct: 200 QIYKQLKNNAKQVVMMADESKF 221
>gi|239625280|ref|ZP_04668311.1| glycerol-3-phosphate regulon repressor [Clostridiales bacterium
1_7_47_FAA]
gi|239519510|gb|EEQ59376.1| glycerol-3-phosphate regulon repressor [Clostridiales bacterium
1_7_47FAA]
Length = 255
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 20/146 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTE-- 59
K A +A++ + D + + G+TA E LL K I N + + +
Sbjct: 81 KVRIATKALELIPDYCVIALDIGTTAYELARLLGQKRGLSVITNSLLIAGELARNTSHKV 140
Query: 60 ----------NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI-I 108
+ + +S++L + D I + I + A++ K +
Sbjct: 141 YCIGGMVSPDEIVTCGIYARNFLSNFASINLFVGSADGITP--KGITEFSEAVVDIKCQL 198
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLP 134
A + I + D SK P
Sbjct: 199 IACADKNIALVDHSKFGKEALFVSCP 224
>gi|167764261|ref|ZP_02436388.1| hypothetical protein BACSTE_02646 [Bacteroides stercoris ATCC
43183]
gi|167698377|gb|EDS14956.1| hypothetical protein BACSTE_02646 [Bacteroides stercoris ATCC
43183]
Length = 254
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 24/142 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF- 61
K+ A A + + ++ + +GST +LA+++ + V+ +S T
Sbjct: 76 QTNEKKRIAIAAAKLIEKNDSIIIASGSTV----HMLAEQLTPIEHLIVVTASLKTAILL 131
Query: 62 -------------------CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
C + + + G D ID +
Sbjct: 132 NAVNNIEVIQLGGTVRKNSCSVIGDYTSQLFEQITCSKLFLGVDGIDLEHGITNSNIAEA 191
Query: 103 LREKIIAHAASRFIVIGDESKR 124
K + A+ R I++ D SK
Sbjct: 192 NLNKKMIEASLRTIILADSSKF 213
>gi|150376764|ref|YP_001313360.1| DeoR family transcriptional regulator [Sinorhizobium medicae
WSM419]
gi|150031311|gb|ABR63427.1| transcriptional regulator, DeoR family [Sinorhizobium medicae
WSM419]
Length = 251
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 50/149 (33%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
KR A R A +++ T+ + G+T + + L+ A+++ +++
Sbjct: 83 KREACRHAARHIRPDETIFIDCGTTLEYLVDLIPENYSITAVCYSLNTAERLTRKANLRI 142
Query: 52 IPSSRNTENFCKIHHI-PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE----K 106
+ + P + ++++ ID ++G E +
Sbjct: 143 VMLGGVYHSSSASFSGAPGLETLERLGINVAFLSAAGIDP----VRGATCVHFHEVPVKQ 198
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A ++ D+SK P+
Sbjct: 199 KVISLARENYLVADKSKLGKLKAAFFAPL 227
>gi|150019364|ref|YP_001311618.1| DeoR family transcriptional regulator [Clostridium beijerinckii
NCIMB 8052]
gi|149905829|gb|ABR36662.1| transcriptional regulator, DeoR family [Clostridium beijerinckii
NCIMB 8052]
Length = 255
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 18/136 (13%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTEN 60
K + A +A Q+V DG ++ + +G+T + L DK N V V
Sbjct: 77 AKSSIAEKAAQFVEDGDSIFIDSGTTTFNMIEYLKDKKNITVFTNNLNVIVQAIPYENIE 136
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE------------KII 108
+ + + + D + + G +L K
Sbjct: 137 IICLSGKLTRKTSSFTGLT-APDILSAYNLNKCFMACTGISLENGVTNTSPDEYKIKKAA 195
Query: 109 AHAASRFIVIGDESKR 124
+S+ ++ D SK
Sbjct: 196 VSKSSKCFLLADTSKF 211
>gi|15900758|ref|NP_345362.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae TIGR4]
gi|111657946|ref|ZP_01408654.1| hypothetical protein SpneT_02000865 [Streptococcus pneumoniae
TIGR4]
gi|225861233|ref|YP_002742742.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae Taiwan19F-14]
gi|298255724|ref|ZP_06979310.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298503120|ref|YP_003725060.1| DeoR family transcriptional regulator [Streptococcus pneumoniae
TCH8431/19A]
gi|14972348|gb|AAK75002.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae TIGR4]
gi|225726925|gb|ACO22776.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae Taiwan19F-14]
gi|298238715|gb|ADI69846.1| DeoR family transcriptional regulator [Streptococcus pneumoniae
TCH8431/19A]
Length = 246
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K V V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNK-----NVTVVTNSIHHAAQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGNVKTATDASIGGVALNQINQLHFDRAFIGINGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|219850160|ref|YP_002464593.1| DeoR family transcriptional regulator [Chloroflexus aggregans DSM
9485]
gi|219544419|gb|ACL26157.1| transcriptional regulator, DeoR family [Chloroflexus aggregans DSM
9485]
Length = 260
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 28/154 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN-TENFCKIH 65
K AR A + + DG T+ + ST + A +IA+ + VI + +
Sbjct: 87 KERIARVAAELINDGDTVMLDA-STTAYAI---ARQIADRRNLTVITNGMHLALALGVNP 142
Query: 66 HIPLHSPE-----DVSSVDLSIDGFDEIDSRLRLIKGYGGA--LLREKIIAHAA------ 112
I D S+ ++ +E+ RL KG+ A L K + ++
Sbjct: 143 AITTIVIGGQVRGDTGSLTGTL--AEEMLQRLHADKGFFSARGLTVAKGLTESSIPEGLL 200
Query: 113 --------SRFIVIGDESKRVDFLGRGMLPIEID 138
R I + D SK P+E
Sbjct: 201 KAEMVRHVDRVIAVLDSSKLGQTALTSFCPVEAI 234
>gi|27364100|ref|NP_759628.1| transcriptional regulator of glmS gene, DeoR family [Vibrio
vulnificus CMCP6]
gi|320157483|ref|YP_004189862.1| transcriptional regulator of glmS gene DeoR family [Vibrio
vulnificus MO6-24/O]
gi|27360218|gb|AAO09155.1| Transcriptional regulator of glmS gene, DeoR family [Vibrio
vulnificus CMCP6]
gi|319932795|gb|ADV87659.1| transcriptional regulator of glmS gene, DeoR family [Vibrio
vulnificus MO6-24/O]
Length = 253
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 18/142 (12%)
Query: 1 MDAL--QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIP 53
M K A +A + + D + + +GST + L K + N V
Sbjct: 71 MSQNVSDRKLKLAEKAAELIRDHNRIVIDSGSTTGALIQQLNSKRGLVVMTNSLHVANAL 130
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE-------- 105
+ +E + + + ++ D I G L R
Sbjct: 131 NELESEPTLLMTGGTWDNHSESFQGKVAESVLRSYDFDQLFIGADGVDLTRGTTTFNELV 190
Query: 106 ---KIIAHAASRFIVIGDESKR 124
K++A + IV+ + K
Sbjct: 191 GLSKVMAEVSREVIVMVESDKV 212
>gi|153672|gb|AAA26903.1| lactose repressor [Streptococcus mutans]
Length = 251
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 20/139 (14%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL------------------LADKIA 44
++ K A++A + V +G T+ +G G+T + L+ K +
Sbjct: 76 QIEEKHYIAQKAAELVEEGDTIFLGPGTTVELLAEEINKTTLQVITNCLPVFQILSQKQS 135
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
FRV ++ + I I E + + + + + A
Sbjct: 136 ETFRVHLLGGEMRSITQSFIGEITNIVLEKM-HFSKMFFSGNGVKGNEVMTSSFQEAYT- 193
Query: 105 EKIIAHAASRFIVIGDESK 123
+K+ A + D SK
Sbjct: 194 QKMALGRAIEKYFLIDSSK 212
>gi|37678685|ref|NP_933294.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
YJ016]
gi|37197425|dbj|BAC93265.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
YJ016]
Length = 253
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 18/142 (12%)
Query: 1 MDAL--QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIP 53
M K A +A + + D + + +GST + L K + N V
Sbjct: 71 MSQNISDRKLKLAEKAAELIRDHNRIVIDSGSTTGALIQQLNSKRGLVVMTNSLHVANAL 130
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE-------- 105
+ +E + + + ++ D I G L R
Sbjct: 131 NELESEPTLLMTGGTWDNHSESFQGKVAESVLRSYDFDQLFIGADGVDLTRGTTTFNELV 190
Query: 106 ---KIIAHAASRFIVIGDESKR 124
K++A + IV+ + K
Sbjct: 191 GLSKVMAEVSREVIVMVESDKV 212
>gi|152966126|ref|YP_001361910.1| DeoR family transcriptional regulator [Kineococcus radiotolerans
SRS30216]
gi|151360643|gb|ABS03646.1| transcriptional regulator, DeoR family [Kineococcus radiotolerans
SRS30216]
Length = 261
Score = 41.0 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K+ AR V G ++G+ G+T E L G + T
Sbjct: 74 QADAKQAIARAVADLVAPGDSVGLNGGTTTTEVARTLGSSERLGSTGAAAGVTIVTNALN 133
Query: 63 KIHH 66
+
Sbjct: 134 IAYE 137
>gi|73663490|ref|YP_302271.1| transcriptional regulator [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72496005|dbj|BAE19326.1| transcriptional regulator [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 260
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K +A ++V +G TL + +GST F L K
Sbjct: 80 KVAIGLKAAEFVENGDTLFIDSGSTTIHFARALTQK 115
>gi|322389746|ref|ZP_08063293.1| lactose PTS family porter repressor [Streptococcus parasanguinis
ATCC 903]
gi|321143585|gb|EFX39016.1| lactose PTS family porter repressor [Streptococcus parasanguinis
ATCC 903]
Length = 248
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR+ A++ + +G T+ +G+G+T L G + ++ +S K
Sbjct: 79 KRSIAKKCADLIENGDTVFIGSGTTTDFIGDYL-----EGKEISIVTNSLPIFEKLKDFP 133
Query: 67 IPLHSP 72
Sbjct: 134 NYDLIL 139
>gi|226357108|ref|YP_002786848.1| DeoR family transcriptional regulator [Deinococcus deserti VCD115]
gi|226319098|gb|ACO47094.1| putative transcriptional regulator, DeoR family [Deinococcus
deserti VCD115]
Length = 266
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 21/143 (14%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTEN 60
Q K A+ A+ + G T+ + G+TA L ++V+
Sbjct: 74 SQQQAKTRLAQAAVTLLRPGQTVYLDAGTTALHVAQALRRSPQLTRTLRVVTHGIDVAYE 133
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDS-----------RLRLIKGYGGALLREKIIA 109
+ + E S SI G D + + I G L ++
Sbjct: 134 LNGECPLYVVGGEVYGS-TFSITGPDALATVARYSYDVFLVGCTSIDARQGGLTNSNLVE 192
Query: 110 H--------AASRFIVIGDESKR 124
A ++I D SK
Sbjct: 193 AQQKTAIMRRARHSVLIADHSKW 215
>gi|168485822|ref|ZP_02710330.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC1087-00]
gi|183571026|gb|EDT91554.1| transcriptional repressor of the fructose operon [Streptococcus
pneumoniae CDC1087-00]
Length = 246
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K V V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNK-----NVTVVTNSIHHAAQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGNVKTATDASIGGVALNQINQLHFDRAFIGINGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|297519127|ref|ZP_06937513.1| putative DNA-binding transcriptional regulator [Escherichia coli
OP50]
Length = 128
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+ A Y+ DG T+ + G+T + L
Sbjct: 78 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL 115
>gi|37526403|ref|NP_929747.1| hypothetical protein plu2511 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785834|emb|CAE14885.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 255
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR + A+ V DG + + G+T +A +A F + +I + + +
Sbjct: 79 KREIGQYAVSMVEDGQVVYLDAGTTTF----EIARVLAERFNLTIITNDFSITQYLMNKP 134
Query: 67 I----------PLHSPEDVSSV------DLSIDGFDEIDSRLRLIKGYGGAL----LREK 106
+ V + +L++D S L G L ++
Sbjct: 135 QLNLFHTGGQVDKRNHSCVGPIAAMLLRNLNVDIAFISTSSWDLEHGVSTPHEEKVLVKQ 194
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A R +++ D SK + + P+
Sbjct: 195 AVLEIARRRVLVSDSSKYGKYGMFRVCPL 223
>gi|87312241|ref|ZP_01094342.1| putative aga operon transcriptional repressor [Blastopirellula
marina DSM 3645]
gi|87285066|gb|EAQ76999.1| putative aga operon transcriptional repressor [Blastopirellula
marina DSM 3645]
Length = 249
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 14/147 (9%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNT 58
+ KR AR A + DG T+ + GST E LL + + N V + + NT
Sbjct: 63 QWEKKRQIARAASVLIEDGDTVLLDGGSTTYELAQLLVGRTLQVVTNSLPVANLFMASNT 122
Query: 59 ENFC------KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL----REKII 108
+ P + + + +G + L E+ +
Sbjct: 123 TDLIFVGGYVHNRTGVSCGPYATEMIAKLNARRAVLSTAGITEQGLYNSNLLLIETEQAM 182
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPI 135
AA I++ D +K P+
Sbjct: 183 VRAAGEVIIVADSTKFGRQSLAHQCPL 209
>gi|306825513|ref|ZP_07458853.1| lactose PTS family porter repressor [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432451|gb|EFM35427.1| lactose PTS family porter repressor [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 246
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIKELVNK-----NITVVTNSIHHAVQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGSVKMATDACIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|295097633|emb|CBK86723.1| Transcriptional regulators of sugar metabolism [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 267
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 26/139 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN--------- 57
KR+ A+ A + V G + + +G+T +A + V + + N
Sbjct: 93 KRSIAQAAAELVKPGHRIILDSGTTTF----EIARMLRQHTDVIAMTNGMNVANALLEAE 148
Query: 58 ------TENFCKIHHIPLHSPEDVSSVDLS-----IDGFDEIDSRLRL-IKGYGGALLRE 105
T + + + S+ G D ID + A L
Sbjct: 149 GVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDLLFLGVDAIDLDRGVSTHNEDEARLNR 208
Query: 106 KIIAHAASRFIVIGDESKR 124
K+ A R IV+ D SK
Sbjct: 209 KMCE-VAERIIVVTDSSKF 226
>gi|229823911|ref|ZP_04449980.1| hypothetical protein GCWU000282_01214 [Catonella morbi ATCC 51271]
gi|229786644|gb|EEP22758.1| hypothetical protein GCWU000282_01214 [Catonella morbi ATCC 51271]
Length = 261
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
Q+K+ A +A Y+ + MT+ M T +TA M L +
Sbjct: 81 EQIKQAIAEKAATYIEEKMTIYMNTSTTAMHVMDYLKE 118
>gi|317490830|ref|ZP_07949266.1| deoR family bacterial regulatory protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920377|gb|EFV41700.1| deoR family bacterial regulatory protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 257
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 23/143 (16%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--- 52
M+ R AA+ A ++V DG TL + +GST + L + + N +
Sbjct: 76 MNRDVKSRIAAKAA-EFVKDGDTLILDSGSTTTQITPHLKTRRDLVVMTNALNIAYELAG 134
Query: 53 -----------PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
+N+ + ++ L +DGFD G A
Sbjct: 135 FERIDVMVLGGSVRQNSYSLYGPAAEQQLRQYRFDTLFLGVDGFD--LEAGITTPNTGEA 192
Query: 102 LLREKIIAHAASRFIVIGDESKR 124
L +++ A I + D SK
Sbjct: 193 HLN-RVMCEVAHEIIAVVDSSKF 214
>gi|281180945|dbj|BAI57275.1| putative transcriptional regulator [Escherichia coli SE15]
Length = 261
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ K+ A Y+ DG T+ + G+T + L + + + S R
Sbjct: 78 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL---LNHNHLRIITNSLRVAHIL 134
Query: 62 CKIHHIPLHSP 72
H + P
Sbjct: 135 YHNPHFEVMVP 145
>gi|317046314|ref|YP_004113962.1| DeoR family transcriptional regulator [Pantoea sp. At-9b]
gi|316947931|gb|ADU67406.1| transcriptional regulator, DeoR family [Pantoea sp. At-9b]
Length = 258
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 45/156 (28%), Gaps = 25/156 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ KR A A+Q++ G TL + +G+T L + +G +
Sbjct: 74 QAKEKRAIAVAAVQHLQPGQTLFLDSGTTTTLLAEEL--RTMSGLTIITNSLQAALALSA 131
Query: 63 KIHHIPLHSP------------------EDVSSVDLSIDGFDEIDS-RLRLIKGYGGAL- 102
H PL++ V + + + G
Sbjct: 132 AEEHEPLNNQVILLGGMMSAGAQQTRGEMTVGEIYRYRADVALLSPVGIEAKHGATSFHP 191
Query: 103 ---LREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ + ASR I++ D SK PI
Sbjct: 192 HEAAIARAMVQQASRTILLADHSKLGVVSRTQYAPI 227
>gi|225569502|ref|ZP_03778527.1| hypothetical protein CLOHYLEM_05588 [Clostridium hylemonae DSM
15053]
gi|225161710|gb|EEG74329.1| hypothetical protein CLOHYLEM_05588 [Clostridium hylemonae DSM
15053]
Length = 258
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 24/139 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP----------- 53
+ K A A++Y+ G T+ +GST+ LA + + + +
Sbjct: 78 EEKLQIASEALKYISYGNTVYFDSGSTSFC----LAQSLPSDIHILAVTNALNICSELTY 133
Query: 54 -SSRNTENFCKIHHIPLH--------SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
S+ +T + +D++ G + I+ ++
Sbjct: 134 RSNISTIMIGGEISRNTLSSRGTLSEEMLKLFRLDVAFLGANSIELDGKIYTANVNETGL 193
Query: 105 EKIIAHAASRFIVIGDESK 123
+K +A + V+ D SK
Sbjct: 194 KKTAMRSAKKTYVLADSSK 212
>gi|303260399|ref|ZP_07346368.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP-BS293]
gi|303262756|ref|ZP_07348694.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP14-BS292]
gi|303265045|ref|ZP_07350959.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae BS397]
gi|303267125|ref|ZP_07352994.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae BS457]
gi|302636078|gb|EFL66575.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP14-BS292]
gi|302638434|gb|EFL68900.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP-BS293]
gi|302643333|gb|EFL73611.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae BS457]
gi|302645405|gb|EFL75638.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae BS397]
Length = 246
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
Q K+ A++A + + + + G+T + L +K A + IP+
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIHELVNKNVTVVTNSIHHAAQLVEKQIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ I + ++ + + G + +D ++ I
Sbjct: 137 VMVGGSVKTATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRAILE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + V+ D SK + P+
Sbjct: 196 NAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|223042564|ref|ZP_03612613.1| lactose phosphotransferase system repressor [Staphylococcus capitis
SK14]
gi|222444227|gb|EEE50323.1| lactose phosphotransferase system repressor [Staphylococcus capitis
SK14]
Length = 251
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + +G T+ +G G+T LA++I + + +
Sbjct: 78 EEKRYIAKKAVELIENGDTIFLGPGTTV----QKLAEEIHHHSLTVITNCLPVFKILMNK 133
Query: 65 HHIPL 69
+
Sbjct: 134 QSLHF 138
>gi|160934008|ref|ZP_02081395.1| hypothetical protein CLOLEP_02870 [Clostridium leptum DSM 753]
gi|156866681|gb|EDO60053.1| hypothetical protein CLOLEP_02870 [Clostridium leptum DSM 753]
Length = 262
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
++ KR A A + + DG T+ + TG+T LA ++ + ++ + + +
Sbjct: 84 MEQKRQIAACAAKLIEDGDTIILDTGTTTL----ELAKCLSGKRDLTIVLNDIEIASLLE 139
Query: 64 IHHI 67
Sbjct: 140 EFTQ 143
>gi|314935866|ref|ZP_07843218.1| lactose phosphotransferase system repressor [Staphylococcus hominis
subsp. hominis C80]
gi|313656431|gb|EFS20171.1| lactose phosphotransferase system repressor [Staphylococcus hominis
subsp. hominis C80]
Length = 251
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV 51
+ KR AR+A+ + + T+ +G G+T + LLA I +
Sbjct: 78 EEKRAVARKAVNLIEENDTIFLGPGTT----IELLAQLIERESLTVI 120
>gi|270293019|ref|ZP_06199230.1| lactose phosphotransferase system repressor [Streptococcus sp.
M143]
gi|270278998|gb|EFA24844.1| lactose phosphotransferase system repressor [Streptococcus sp.
M143]
Length = 246
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIKELVNK-----NITVVTNSIHHAVQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGSVKMATDACIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|228474672|ref|ZP_04059403.1| lactose phosphotransferase system repressor [Staphylococcus hominis
SK119]
gi|228271335|gb|EEK12703.1| lactose phosphotransferase system repressor [Staphylococcus hominis
SK119]
Length = 251
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV 51
+ KR AR+A+ + + T+ +G G+T + LLA I +
Sbjct: 78 EEKRAVARKAVNLIEENDTIFLGPGTT----IELLAQLIERESLTVI 120
>gi|148984608|ref|ZP_01817876.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP3-BS71]
gi|147922999|gb|EDK74114.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP3-BS71]
Length = 219
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K V V+ +S +
Sbjct: 50 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNK-----NVTVVTNSIHHAAQLVE 104
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 105 KQIPTVMVGGNVKTATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 163
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 164 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 193
>gi|294618102|ref|ZP_06697699.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1679]
gi|291595674|gb|EFF26970.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1679]
Length = 267
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + + D + + GST E + L G ++ V+ +S
Sbjct: 96 KQQIAKSAAETINDEDVIYLDAGSTTLEMIPFL-----QGKQITVVTNSVQHAANLVDLE 150
Query: 67 IPLHSPEDVSSVDL-SIDGFDEID-----SRLRLIKGYGGALLRE-------------KI 107
+ + ++ G + I+ + G GA L + ++
Sbjct: 151 LATIILGGTIKLATNAVLGSNAIEQLKNFHFNKAFMGMNGAHLEQGFTTPDPEEAAVKRL 210
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ V+ D +K + P+E
Sbjct: 211 AMKNSEETFVLIDHTKFNQLSFTSVAPLE 239
>gi|322374574|ref|ZP_08049088.1| lactose phosphotransferase system repressor [Streptococcus sp.
C300]
gi|321280074|gb|EFX57113.1| lactose phosphotransferase system repressor [Streptococcus sp.
C300]
Length = 246
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTTTAFLIKELVNK-----NITVVTNSIHHAVQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGSVKMATDACIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|317401638|gb|EFV82264.1| DeoR family Transcriptional regulator [Achromobacter xylosoxidans
C54]
Length = 253
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 39/137 (28%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR AR A V G TL + GST LA + +
Sbjct: 76 KRAIARAAAGLVTSGQTLFLDAGSTTSMLADELAKLSGLTLITNSFDVALKVGAAGSGAN 135
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------------------REK 106
+ V + G D + + + ALL +
Sbjct: 136 ELIMLGGSVGGPVCATAG-DITIAEIHRYRA-DVALLSPVGVDAECGATSYDLREAEVAR 193
Query: 107 IIAHAASRFIVIGDESK 123
+A A + I++ D SK
Sbjct: 194 AMAANAKQRILLADFSK 210
>gi|220912127|ref|YP_002487436.1| DeoR family transcriptional regulator [Arthrobacter
chlorophenolicus A6]
gi|219859005|gb|ACL39347.1| transcriptional regulator, DeoR family [Arthrobacter
chlorophenolicus A6]
Length = 263
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGM--GTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
D + K AR A + G +G+ GT STA LA +A + PS+++T
Sbjct: 73 DHAEAKEQIARAASALIRPGAVIGLCGGTTSTA------LAQILATREDLNA-PSNQSTL 125
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
++ + + G ++ R + G ++ +K++ A
Sbjct: 126 TVVTNAINIAGQLAVRPNIKVMVTGG-ILNPRSYELVGPYTDIIMQKVVLDIA 177
>gi|171778848|ref|ZP_02919910.1| hypothetical protein STRINF_00769 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282494|gb|EDT47918.1| hypothetical protein STRINF_00769 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 256
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
++ KR A+ A + +G T+ +G G+T + F L +A RV S T
Sbjct: 79 QIEEKRAIAKFASTLIQEGETVFIGPGTTLEHFAHEL---VAKNIRVVTNSLSVFTILNQ 135
Query: 63 KIHHIPLHSPEDVSSVDLSIDGF 85
+ + + + + G
Sbjct: 136 NKSTDLILTGGEYRDITGAFVGS 158
>gi|118592804|ref|ZP_01550193.1| transcriptional regulator, DeoR family protein [Stappia aggregata
IAM 12614]
gi|118434574|gb|EAV41226.1| transcriptional regulator, DeoR family protein [Stappia aggregata
IAM 12614]
Length = 250
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSR 56
++ K AR+A + G T+ + G+T F LA I N +
Sbjct: 73 TQIRAKSEIARKAAGLIQPGQTIFVDAGTTTALFARELAKLSGLSVITNSLDIATTLQGA 132
Query: 57 NTENFCKIHHIPLHSPEDVSSVDL 80
E + P V + L
Sbjct: 133 GKEVLLLGGRMAADVPATVGELTL 156
>gi|86138804|ref|ZP_01057376.1| glycerol-3-phosphate regulon repressor [Roseobacter sp. MED193]
gi|85824451|gb|EAQ44654.1| glycerol-3-phosphate regulon repressor [Roseobacter sp. MED193]
Length = 239
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 16/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA---DKIANGFRVQVIPSSRNTENF 61
Q K+ AR + DG + +GTG+T + LA D + + + +
Sbjct: 63 QEKQRIARAVKNLIPDGARVALGTGTTVETCARFLASHKDLWVVSNSIHAVCAVQQAPGV 122
Query: 62 CKIHHIPLHSPEDVSSVD------LSIDGFDEIDSRLRLIKGYGGAL-------LREKII 108
D+ + + D + G + K I
Sbjct: 123 AVELAGGTVRMRDLDVIGGHALEFFANHRVDFALFSCGGLSKAGQVMDYNVDEITARKAI 182
Query: 109 AHAASRFIVIGDESK 123
A + I++ D +K
Sbjct: 183 ATCGKKRILVMDSTK 197
>gi|314934263|ref|ZP_07841622.1| lactose phosphotransferase system repressor [Staphylococcus caprae
C87]
gi|313652193|gb|EFS15956.1| lactose phosphotransferase system repressor [Staphylococcus caprae
C87]
Length = 251
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A++ + +G T+ +G G+T LA++I + + +
Sbjct: 78 EEKRYIAKKAVELIENGDTIFLGPGTTV----QKLAEEIHHHSLTVITNCLPVFKILMNK 133
Query: 65 HHIPL 69
+
Sbjct: 134 QSLHF 138
>gi|314939707|ref|ZP_07846931.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a04]
gi|314942235|ref|ZP_07849087.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133C]
gi|314948868|ref|ZP_07852238.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0082]
gi|314950810|ref|ZP_07853882.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133A]
gi|314993225|ref|ZP_07858604.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133B]
gi|314995232|ref|ZP_07860345.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a01]
gi|313590562|gb|EFR69407.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a01]
gi|313592280|gb|EFR71125.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133B]
gi|313597025|gb|EFR75870.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133A]
gi|313599007|gb|EFR77852.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133C]
gi|313641042|gb|EFS05622.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a04]
gi|313644741|gb|EFS09321.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0082]
Length = 267
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 24/149 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + + D + + GST E + L G ++ V+ +S
Sbjct: 96 KQQIAKSAAETINDEDVIYLDAGSTTLEMIPFL-----QGKQITVVTNSVQHAANLVDLE 150
Query: 67 IPLHSPEDVSSVDL-SIDGFDEID-----SRLRLIKGYGGALLRE-------------KI 107
+ + ++ G + I+ + G GA L + ++
Sbjct: 151 LATIILGGTIKLATNAVLGSNAIEQLKNFHFNKAFMGMNGAHLEQGFTTPDPEEAAVKRL 210
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ V+ D +K + P+E
Sbjct: 211 AMKNSEETFVLIDHTKFNQLSFTSVAPLE 239
>gi|15672771|ref|NP_266945.1| transcription regulator [Lactococcus lactis subsp. lactis Il1403]
gi|12723709|gb|AAK04887.1|AE006312_7 transcriptional regulator [Lactococcus lactis subsp. lactis Il1403]
gi|326406340|gb|ADZ63411.1| DeoR family transcriptional regulator [Lactococcus lactis subsp.
lactis CV56]
Length = 247
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 23/140 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+KR A +A + ++DG T+ + +GST LA N + N
Sbjct: 70 DLKRKIAVKAAENILDGDTVMIESGSTCALLAEELAFNRKNVTIITNSVFIANYIRKSDS 129
Query: 65 HHI--------------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + V + + IDGFD + A+
Sbjct: 130 VKVILLGGEYQNNSQVNVGPLIKKVVDEFYVDKLFIGIDGFDPVRGFRSNDLARSEAI-- 187
Query: 105 EKIIAHAASRFIVIGDESKR 124
++A AA I++ D SK
Sbjct: 188 -HVMAAAAKEVIILTDASKF 206
>gi|258510885|ref|YP_003184319.1| transcriptional regulator, DeoR family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477611|gb|ACV57930.1| transcriptional regulator, DeoR family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 260
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 43/143 (30%), Gaps = 24/143 (16%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K A A++ V G + + G+T LA + + V S
Sbjct: 76 QEAKTRIAALALELVRPGQVVLLDAGTTTY----ELARQWRHEGVTVVTNSLDIASELSS 131
Query: 64 IHHIPLHSPE-------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ L D VD++ G + +D R A
Sbjct: 132 RREMDLVMLGGQFRAKTGAFVGPFAERMLDELHVDIAFLGANGVDFRGITTPNPQEA-AV 190
Query: 105 EKIIAHAASRFIVIGDESKRVDF 127
++ + A R +++ D +K
Sbjct: 191 KRAMVKCADRVVLVADRTKLHQT 213
>gi|225387789|ref|ZP_03757553.1| hypothetical protein CLOSTASPAR_01559 [Clostridium asparagiforme
DSM 15981]
gi|225046123|gb|EEG56369.1| hypothetical protein CLOSTASPAR_01559 [Clostridium asparagiforme
DSM 15981]
Length = 259
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ +A +++ + + M +GST F + DK V V+ ++ +
Sbjct: 84 EEKKRIGDKACEFLKNDDIIFMNSGSTVLFFQEAIRDK-----HVTVVTNNARAPFCSRQ 138
Query: 65 HHIPLHSP 72
+ + S
Sbjct: 139 PGVEILSL 146
>gi|309780703|ref|ZP_07675444.1| transcriptional regulator, DeoR family [Ralstonia sp. 5_7_47FAA]
gi|308920385|gb|EFP66041.1| transcriptional regulator, DeoR family [Ralstonia sp. 5_7_47FAA]
Length = 254
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 18/151 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN---------------G 46
A + K AR A ++ DG T+ + G+T L+ K + G
Sbjct: 73 SAREQKEAIARLAQAHIADGDTIFLDGGTTTAALARHLSGKQIHVVTNNLMVVTSLAAGG 132
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD-EIDSRLRLIKGYGGALLRE 105
V +I + + + S V SVD + D + + A L+E
Sbjct: 133 IPVTLIGGDVRPSSMSTLGPLAQLSLGRV-SVDKAFLSADGVVATNGLCEASADQAYLKE 191
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ A++ IV+ K + PIE
Sbjct: 192 -CVIRQAAQVIVLATADKLGRATQQHWTPIE 221
>gi|187927658|ref|YP_001898145.1| DeoR family transcriptional regulator [Ralstonia pickettii 12J]
gi|187724548|gb|ACD25713.1| transcriptional regulator, DeoR family [Ralstonia pickettii 12J]
Length = 254
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 18/151 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN---------------G 46
A + K AR A ++ DG T+ + G+T L+ K + G
Sbjct: 73 SAREQKEAIARLAQAHIADGDTIFLDGGTTTAALARHLSGKQIHVVTNNLMVVTSLAAGG 132
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD-EIDSRLRLIKGYGGALLRE 105
V +I + + + S V SVD + D + + A L+E
Sbjct: 133 IPVTLIGGDVRPSSMSTLGPLAQLSLGRV-SVDKAFLSADGVVATNGLCEASADQAYLKE 191
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ A++ IV+ K + PIE
Sbjct: 192 -CVIRQAAQVIVLATADKLGRATQQHWTPIE 221
>gi|157158966|ref|YP_001465368.1| DeoR family transcriptional regulator [Escherichia coli E24377A]
gi|157080996|gb|ABV20704.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
E24377A]
Length = 261
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+ A Y+ DG T+ + G+T + L
Sbjct: 78 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL 115
>gi|89110144|ref|AP_003924.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. W3110]
gi|90111660|ref|NP_418320.2| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. MG1655]
gi|168748832|ref|ZP_02773854.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4113]
gi|168761744|ref|ZP_02786751.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4501]
gi|168786729|ref|ZP_02811736.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC869]
gi|170083356|ref|YP_001732676.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
substr. DH10B]
gi|170683985|ref|YP_001746214.1| DeoR family transcriptional regulator [Escherichia coli SMS-3-5]
gi|188492820|ref|ZP_03000090.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
53638]
gi|194438351|ref|ZP_03070442.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
101-1]
gi|195937523|ref|ZP_03082905.1| DNA-binding transcriptional regulator [Escherichia coli O157:H7
str. EC4024]
gi|208813225|ref|ZP_03254554.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4045]
gi|208819266|ref|ZP_03259586.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4042]
gi|209921358|ref|YP_002295442.1| putative transcriptional regulator [Escherichia coli SE11]
gi|217325079|ref|ZP_03441163.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. TW14588]
gi|218556444|ref|YP_002389358.1| putative DNA-binding transcriptional regulator [Escherichia coli
IAI1]
gi|218692169|ref|YP_002400381.1| putative DNA-binding transcriptional regulator [Escherichia coli
ED1a]
gi|218701416|ref|YP_002409045.1| putative DNA-binding transcriptional regulator [Escherichia coli
IAI39]
gi|218707511|ref|YP_002415030.1| putative DNA-binding transcriptional regulator [Escherichia coli
UMN026]
gi|238902951|ref|YP_002928747.1| putative DNA-binding transcriptional regulator [Escherichia coli
BW2952]
gi|253775480|ref|YP_003038311.1| DeoR family transcriptional regulator [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163835|ref|YP_003046943.1| putative DNA-binding transcriptional regulator [Escherichia coli B
str. REL606]
gi|254795878|ref|YP_003080715.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. TW14359]
gi|256021523|ref|ZP_05435388.1| predicted DNA-binding transcriptional regulator [Shigella sp. D9]
gi|256026082|ref|ZP_05439947.1| predicted DNA-binding transcriptional regulator [Escherichia sp.
4_1_40B]
gi|260846348|ref|YP_003224126.1| putative DNA-binding transcriptional regulator [Escherichia coli
O103:H2 str. 12009]
gi|260857718|ref|YP_003231609.1| putative DNA-binding transcriptional regulator [Escherichia coli
O26:H11 str. 11368]
gi|260870600|ref|YP_003237002.1| putative DNA-binding transcriptional regulator [Escherichia coli
O111:H- str. 11128]
gi|261223512|ref|ZP_05937793.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. FRIK2000]
gi|261257275|ref|ZP_05949808.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. FRIK966]
gi|293407506|ref|ZP_06651425.1| transcriptional regulator [Escherichia coli FVEC1412]
gi|298383249|ref|ZP_06992842.1| HTH-type transcriptional regulator yihW [Escherichia coli FVEC1302]
gi|301020242|ref|ZP_07184362.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 196-1]
gi|307140579|ref|ZP_07499935.1| putative DNA-binding transcriptional regulator [Escherichia coli
H736]
gi|307313994|ref|ZP_07593608.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|331670728|ref|ZP_08371564.1| putative DEOR-type transcriptional regulator [Escherichia coli
TA271]
gi|13432258|sp|P32144|YIHW_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator
yihW
gi|85676175|dbj|BAE77425.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K12 substr. W3110]
gi|87082344|gb|AAD13446.2| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. MG1655]
gi|169891191|gb|ACB04898.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. DH10B]
gi|170521703|gb|ACB19881.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
SMS-3-5]
gi|188016835|gb|EDU54957.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4113]
gi|188488019|gb|EDU63122.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
53638]
gi|189367904|gb|EDU86320.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4501]
gi|189373307|gb|EDU91723.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC869]
gi|194422788|gb|EDX38784.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
101-1]
gi|208734502|gb|EDZ83189.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4045]
gi|208739389|gb|EDZ87071.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4042]
gi|209914617|dbj|BAG79691.1| putative transcriptional regulator [Escherichia coli SE11]
gi|217321300|gb|EEC29724.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. TW14588]
gi|218363213|emb|CAR00855.1| putative DNA-binding transcriptional regulator [Escherichia coli
IAI1]
gi|218371402|emb|CAR19235.1| putative DNA-binding transcriptional regulator [Escherichia coli
IAI39]
gi|218429733|emb|CAR10694.2| putative DNA-binding transcriptional regulator [Escherichia coli
ED1a]
gi|218434608|emb|CAR15539.1| putative DNA-binding transcriptional regulator [Escherichia coli
UMN026]
gi|238862327|gb|ACR64325.1| predicted DNA-binding transcriptional regulator [Escherichia coli
BW2952]
gi|242379421|emb|CAQ34235.1| predicted DNA-binding transcriptional regulator [Escherichia coli
BL21(DE3)]
gi|253326524|gb|ACT31126.1| transcriptional regulator, DeoR family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975736|gb|ACT41407.1| predicted DNA-binding transcriptional regulator [Escherichia coli B
str. REL606]
gi|253979892|gb|ACT45562.1| predicted DNA-binding transcriptional regulator [Escherichia coli
BL21(DE3)]
gi|254595278|gb|ACT74639.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. TW14359]
gi|257756367|dbj|BAI27869.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O26:H11 str. 11368]
gi|257761495|dbj|BAI32992.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O103:H2 str. 12009]
gi|257766956|dbj|BAI38451.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O111:H- str. 11128]
gi|260451280|gb|ACX41702.1| transcriptional regulator, DeoR family [Escherichia coli DH1]
gi|284923986|emb|CBG37085.1| DeoR-family transcriptional regulator [Escherichia coli 042]
gi|291425423|gb|EFE98462.1| transcriptional regulator [Escherichia coli FVEC1412]
gi|298276283|gb|EFI17803.1| HTH-type transcriptional regulator yihW [Escherichia coli FVEC1302]
gi|299881875|gb|EFI90086.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 196-1]
gi|306906311|gb|EFN36827.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|309704310|emb|CBJ03659.1| DeoR-family transcriptional regulator [Escherichia coli ETEC
H10407]
gi|315063171|gb|ADT77498.1| predicted DNA-binding transcriptional regulator [Escherichia coli
W]
gi|315138452|dbj|BAJ45611.1| transcriptional regulator [Escherichia coli DH1]
gi|315618748|gb|EFU99332.1| uncharacterized HTH-type transcriptional regulator yihW
[Escherichia coli 3431]
gi|320191024|gb|EFW65674.1| DeoR-type transcriptional regulator YihW [Escherichia coli O157:H7
str. EC1212]
gi|320639223|gb|EFX08850.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. G5101]
gi|320644611|gb|EFX13665.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H- str. 493-89]
gi|320649935|gb|EFX18443.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H- str. H 2687]
gi|320655241|gb|EFX23187.1| putative DNA-binding transcriptional regulator [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320660868|gb|EFX28314.1| putative DNA-binding transcriptional regulator [Escherichia coli
O55:H7 str. USDA 5905]
gi|320666028|gb|EFX33047.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. LSU-61]
gi|323380765|gb|ADX53033.1| transcriptional regulator, DeoR family [Escherichia coli KO11]
gi|323934372|gb|EGB30785.1| deoR family protein Bacterial regulatory protein [Escherichia coli
E1520]
gi|323939054|gb|EGB35271.1| deoR family protein regulatory protein [Escherichia coli E482]
gi|323959349|gb|EGB55010.1| deoR family protein regulatory protein [Escherichia coli H489]
gi|323964232|gb|EGB59715.1| deoR family protein regulatory protein [Escherichia coli M863]
gi|323969750|gb|EGB65033.1| deoR family protein regulatory protein [Escherichia coli TA007]
gi|323974287|gb|EGB69416.1| deoR family protein regulatory protein [Escherichia coli TW10509]
gi|324115622|gb|EGC09560.1| deoR family protein regulatory protein [Escherichia coli E1167]
gi|326338111|gb|EGD61941.1| DeoR-type transcriptional regulator YihW [Escherichia coli O157:H7
str. 1044]
gi|326342594|gb|EGD66367.1| DeoR-type transcriptional regulator YihW [Escherichia coli O157:H7
str. 1125]
gi|327250514|gb|EGE62222.1| hypothetical protein ECSTEC7V_4596 [Escherichia coli STEC_7v]
gi|331061983|gb|EGI33906.1| putative DEOR-type transcriptional regulator [Escherichia coli
TA271]
gi|332345876|gb|AEE59210.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 261
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+ A Y+ DG T+ + G+T + L
Sbjct: 78 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL 115
>gi|195656763|gb|ACG47849.1| hypothetical protein [Zea mays]
Length = 66
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 2 DALQMKRNAARRAIQYVVDGMTL 24
++KR AA RA+++V GM +
Sbjct: 15 TQEELKRVAAHRAVEFVEPGMAV 37
>gi|300775010|ref|ZP_07084873.1| DeoR family transcriptional regulator [Chryseobacterium gleum ATCC
35910]
gi|300506825|gb|EFK37960.1| DeoR family transcriptional regulator [Chryseobacterium gleum ATCC
35910]
Length = 267
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 28/142 (19%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ AR A+ + + + + +G+T +L + G + S R C
Sbjct: 91 EAKQAIARAALPLIQENDCIILASGTTMHYLARML---MNFGPLTVLTSSLRVAIELCNN 147
Query: 65 HHIPLHSP----------------------EDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+I + + + L +DG D A
Sbjct: 148 PNINVIQLGGEVRKSSTSIVGSISEGILKQFSCNKLFLGVDGID--LEFGISTSNAAEAH 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L + ++ A + +V+ D SK
Sbjct: 206 LNQ-VMIECADKTVVLADSSKL 226
>gi|293365126|ref|ZP_06611843.1| lactose PTS family porter repressor [Streptococcus oralis ATCC
35037]
gi|307702169|ref|ZP_07639129.1| lactose phosphotransferase system repressor [Streptococcus oralis
ATCC 35037]
gi|291316576|gb|EFE57012.1| lactose PTS family porter repressor [Streptococcus oralis ATCC
35037]
gi|307624182|gb|EFO03159.1| lactose phosphotransferase system repressor [Streptococcus oralis
ATCC 35037]
Length = 246
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 25/150 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A + + + + G+T + L +K + V+ +S +
Sbjct: 77 QEKKILAQKAASLIKEQDVIFIDAGTTTAFLIKELVNK-----NITVVTNSIHHAVQLVE 131
Query: 65 HHIPL-----------------HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
IP + ++ + + G + +D +
Sbjct: 132 KQIPTVMVGGSVKMATDACIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ I A + V+ D SK + P+
Sbjct: 191 RAILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|300823706|ref|ZP_07103832.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 119-7]
gi|300896428|ref|ZP_07114960.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 198-1]
gi|300906202|ref|ZP_07123914.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 84-1]
gi|300919071|ref|ZP_07135613.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 115-1]
gi|300925926|ref|ZP_07141761.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 182-1]
gi|300931683|ref|ZP_07146990.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 187-1]
gi|300948146|ref|ZP_07162278.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 116-1]
gi|300957277|ref|ZP_07169505.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 175-1]
gi|301023859|ref|ZP_07187591.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 69-1]
gi|301303355|ref|ZP_07209479.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 124-1]
gi|301328201|ref|ZP_07221329.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 78-1]
gi|301648463|ref|ZP_07248192.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 146-1]
gi|309796589|ref|ZP_07690995.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 145-7]
gi|300315966|gb|EFJ65750.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 175-1]
gi|300359701|gb|EFJ75571.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 198-1]
gi|300396866|gb|EFJ80404.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 69-1]
gi|300402004|gb|EFJ85542.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 84-1]
gi|300413810|gb|EFJ97120.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 115-1]
gi|300418030|gb|EFK01341.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 182-1]
gi|300452333|gb|EFK15953.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 116-1]
gi|300460522|gb|EFK24015.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 187-1]
gi|300523768|gb|EFK44837.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 119-7]
gi|300841309|gb|EFK69069.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 124-1]
gi|300845338|gb|EFK73098.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 78-1]
gi|301073459|gb|EFK88265.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 146-1]
gi|308119745|gb|EFO57007.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 145-7]
gi|315254250|gb|EFU34218.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 85-1]
gi|315300236|gb|EFU59473.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 16-3]
gi|324006832|gb|EGB76051.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 57-2]
gi|324020470|gb|EGB89689.1| putative glycerol-3-phosphate regulon repressor [Escherichia coli
MS 117-3]
Length = 268
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+ A Y+ DG T+ + G+T + L
Sbjct: 85 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL 122
>gi|297616652|ref|YP_003701811.1| acetyl-CoA hydrolase/transferase [Syntrophothermus lipocalidus DSM
12680]
gi|297144489|gb|ADI01246.1| acetyl-CoA hydrolase/transferase [Syntrophothermus lipocalidus DSM
12680]
Length = 446
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 63/215 (29%), Gaps = 26/215 (12%)
Query: 1 MD-ALQMKRNAA--RRAIQYVVDGMTLG--MGTGSTAKEFMILLADKIANGFRVQVIPSS 55
M+ KR A + V G +G +GTGS + + + + D+ V++ S
Sbjct: 1 MNWQEDYKRKLTTYEEAAKVVKSGDVVGTALGTGSCSDKMLDAILDRHEELENVKITDSI 60
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
+ + ++ + + + A + +
Sbjct: 61 QVYPSKLYDPKFMAQLEGRITHTPI-FAIATVRKMYQAQLSDFWPATTMDAGDKYGERVT 119
Query: 116 IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSD 175
+ SK + P F +++ ++ + E+ + +
Sbjct: 120 VFALMVSKPNKQGYVNLGP---TCFYTAESIRLGRKRGQLRTVIAEV-----NDQMPIVF 171
Query: 176 GGNYIVDAFFGFIP------------DPQIISGEL 198
G N++ + F +I +P + +
Sbjct: 172 GDNWMHISEFDYIIERSAPIPTFKRGEPSEVEQRI 206
>gi|331649728|ref|ZP_08350808.1| putative DEOR-type transcriptional regulator [Escherichia coli
M605]
gi|331041361|gb|EGI13511.1| putative DEOR-type transcriptional regulator [Escherichia coli
M605]
Length = 269
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ K+ A Y+ DG T+ + G+T + L + + + S R
Sbjct: 86 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL---LNHNHLRIITNSLRVAHIL 142
Query: 62 CKIHHIPLHSP 72
H + P
Sbjct: 143 YHNPHFEVMVP 153
>gi|319651984|ref|ZP_08006105.1| transcriptional regulator [Bacillus sp. 2_A_57_CT2]
gi|317396275|gb|EFV76992.1| transcriptional regulator [Bacillus sp. 2_A_57_CT2]
Length = 250
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 18/139 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q KR A+ A V +G ++ + GST E + L K + +
Sbjct: 77 QQKRQIAQYAASLVEEGDSIYLDAGSTVTEMIPFLPAKEIVVVTNGLMHINALLERNIKT 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+I ++ I L S + D G + I + K +A
Sbjct: 137 FLIGGFAKSQTKAIIGRGALESL-ENYRFDKCFMGVNGIHPQF-GYTTPDQDEAMIKQMA 194
Query: 110 -HAASRFIVIGDESKRVDF 127
+ V+ D++K +
Sbjct: 195 ISLSREAFVLADDTKFSEI 213
>gi|24378976|ref|NP_720931.1| putative DeoR-type transcriptional regulator [Streptococcus mutans
UA159]
gi|24376866|gb|AAN58237.1|AE014895_2 putative DeoR-type transcriptional regulator [Streptococcus mutans
UA159]
Length = 248
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 17/137 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A +A++ V D T+ + +GST + N +
Sbjct: 72 KKRIAAKAVELVRDNETIMIESGSTCALLAEAICQSRRNVKIITNSCFIATYIRKYDSCQ 131
Query: 67 I-----PLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ +V+ V+ G D D L + + +A
Sbjct: 132 VILLGGNYQPNSEVTVGPLLKEMLKLFHVEKLFVGTDGFDDELGFMGKDMMRCEVVQYMA 191
Query: 110 HAASRFIVIGDESKRVD 126
+A +V+ D SK
Sbjct: 192 ESADELVVLTDSSKFAK 208
>gi|15834061|ref|NP_312834.1| DEOR-type transcriptional regulator [Escherichia coli O157:H7 str.
Sakai]
gi|187776064|ref|ZP_02800301.2| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4196]
gi|189010229|ref|ZP_02805797.2| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4076]
gi|189402179|ref|ZP_02780564.2| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4401]
gi|189403091|ref|ZP_02793181.2| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4486]
gi|189405845|ref|ZP_02824556.2| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC508]
gi|191166433|ref|ZP_03028264.1| transcriptional regulator, DeoR/GntR family [Escherichia coli B7A]
gi|193063911|ref|ZP_03044997.1| transcriptional regulator, DeoR/GntR family [Escherichia coli E22]
gi|194428669|ref|ZP_03061206.1| transcriptional regulator, DeoR/GntR family [Escherichia coli B171]
gi|208806981|ref|ZP_03249318.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4206]
gi|209398202|ref|YP_002273401.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4115]
gi|254039093|ref|ZP_04873143.1| transcriptional regulator [Escherichia sp. 1_1_43]
gi|291285295|ref|YP_003502113.1| putative DEOR-type transcriptional activator [Escherichia coli
O55:H7 str. CB9615]
gi|293417346|ref|ZP_06659970.1| HTH-type transcriptional regulator yihW [Escherichia coli B185]
gi|331644615|ref|ZP_08345734.1| putative DEOR-type transcriptional regulator [Escherichia coli
H736]
gi|331655570|ref|ZP_08356562.1| putative DEOR-type transcriptional regulator [Escherichia coli
M718]
gi|331679993|ref|ZP_08380655.1| putative DEOR-type transcriptional regulator [Escherichia coli
H591]
gi|332282762|ref|ZP_08395175.1| conserved hypothetical protein [Shigella sp. D9]
gi|304988|gb|AAB03017.1| similar to E. coli GlpR repressor [Escherichia coli str. K-12
substr. MG1655]
gi|13364283|dbj|BAB38230.1| putative DEOR-type transcriptional regulator [Escherichia coli
O157:H7 str. Sakai]
gi|187769140|gb|EDU32984.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4196]
gi|189001425|gb|EDU70411.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4076]
gi|189357197|gb|EDU75616.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4401]
gi|189362700|gb|EDU81119.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4486]
gi|189378114|gb|EDU96530.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC508]
gi|190903533|gb|EDV63251.1| transcriptional regulator, DeoR/GntR family [Escherichia coli B7A]
gi|192929376|gb|EDV82984.1| transcriptional regulator, DeoR/GntR family [Escherichia coli E22]
gi|194413252|gb|EDX29537.1| transcriptional regulator, DeoR/GntR family [Escherichia coli B171]
gi|208726782|gb|EDZ76383.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4206]
gi|209159602|gb|ACI37035.1| transcriptional regulator, DeoR/GntR family [Escherichia coli
O157:H7 str. EC4115]
gi|209752648|gb|ACI74631.1| putative phosphatase [Escherichia coli]
gi|209752650|gb|ACI74632.1| putative phosphatase [Escherichia coli]
gi|209752652|gb|ACI74633.1| putative phosphatase [Escherichia coli]
gi|209752654|gb|ACI74634.1| putative phosphatase [Escherichia coli]
gi|209752656|gb|ACI74635.1| putative phosphatase [Escherichia coli]
gi|226838529|gb|EEH70558.1| transcriptional regulator [Escherichia sp. 1_1_43]
gi|290765168|gb|ADD59129.1| Putative DEOR-type transcriptional activator [Escherichia coli
O55:H7 str. CB9615]
gi|291430866|gb|EFF03862.1| HTH-type transcriptional regulator yihW [Escherichia coli B185]
gi|331036077|gb|EGI08313.1| putative DEOR-type transcriptional regulator [Escherichia coli
H736]
gi|331046671|gb|EGI18756.1| putative DEOR-type transcriptional regulator [Escherichia coli
M718]
gi|331072319|gb|EGI43652.1| putative DEOR-type transcriptional regulator [Escherichia coli
H591]
gi|332105114|gb|EGJ08460.1| conserved hypothetical protein [Shigella sp. D9]
Length = 269
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A Y+ DG T+ + G+T + L +
Sbjct: 86 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNH 126
>gi|24379890|ref|NP_721845.1| lactose repressor [Streptococcus mutans UA159]
gi|26006992|sp|P26422|LACR_STRMU RecName: Full=Lactose phosphotransferase system repressor
gi|24377866|gb|AAN59151.1|AE014981_8 lactose repressor [Streptococcus mutans UA159]
Length = 251
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 20/139 (14%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL------------------LADKIA 44
++ K A++A + V +G T+ +G G+T + L+ K +
Sbjct: 76 QIEEKHYIAQKAAELVEEGDTIFLGPGTTVELLAEEINKTTLQVITNCLPVFQILSQKQS 135
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
FRV ++ + I I E + + + + + A
Sbjct: 136 ETFRVHLLGGEMRSITQSFIGEITNIVLEKM-HFSKMFFSGNGVKGNEVMTSSFQEAYT- 193
Query: 105 EKIIAHAASRFIVIGDESK 123
+K+ A ++ D SK
Sbjct: 194 QKMALGRAIEKYLLIDSSK 212
>gi|320181405|gb|EFW56323.1| Transcriptional repressor of aga operon [Shigella boydii ATCC 9905]
Length = 269
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
MKR+ A+ A++ + G + +G+T +A + V + +
Sbjct: 92 MKRSVAKAAVELIQPGHRVIFDSGTTTF----EIARLMRKHTDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L ++ A R IV+ D SK
Sbjct: 206 LNRRMCE-VAERIIVVTDSSKF 226
>gi|54302715|ref|YP_132708.1| sugar metabolism transcriptional regulator [Photobacterium
profundum SS9]
gi|46916139|emb|CAG22908.1| hypothetical GlpR, transcriptional regulators of sugar metabolism
[Photobacterium profundum SS9]
Length = 258
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----------------NGFRV 49
K++ A+ A + DG + + +GST L K +
Sbjct: 79 KQSIAKAAADLINDGEAVILDSGSTIGLMPQYLTHKQQLVVMTNALNTAYQLSGVENIDL 138
Query: 50 QVI--PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
V+ R + + H + L +DGFD A +
Sbjct: 139 HVVGGSLRRASCSLVGSHGEQQIRSYLFDKLFLGVDGFDLSAG--ITTPDSNEA-QINRA 195
Query: 108 IAHAASRFIVIGDESKR 124
+ A + I + D SK
Sbjct: 196 MCEVAHQVIAVTDSSKF 212
>gi|330908201|gb|EGH36720.1| deoR-type transcriptional regulator YihW [Escherichia coli AA86]
Length = 245
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ K+ A Y+ DG T+ + G+T + L + + + S R
Sbjct: 62 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARAL---LNHNHLRIITNSLRVAHIL 118
Query: 62 CKIHHIPLHSP 72
H + P
Sbjct: 119 YHNPHFEVMVP 129
>gi|170769716|ref|ZP_02904169.1| transcriptional regulator, DeoR/GntR family [Escherichia albertii
TW07627]
gi|170121524|gb|EDS90455.1| transcriptional regulator, DeoR/GntR family [Escherichia albertii
TW07627]
Length = 261
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A Y+ DG T+ + G+T + L +
Sbjct: 78 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNH 118
>gi|254478133|ref|ZP_05091516.1| transcriptional regulator, DeoR family [Carboxydibrachium pacificum
DSM 12653]
gi|214035995|gb|EEB76686.1| transcriptional regulator, DeoR family [Carboxydibrachium pacificum
DSM 12653]
Length = 254
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
+ KR A+ A+ ++ DG TL + +G+T ++ G +V + E
Sbjct: 80 EEKRKIAKLALNFIEDGDTLFLDSGTTIYYLAKIMGS--KKGLKVVTVDVKIAAE 132
>gi|15804470|ref|NP_290510.1| putative DEOR-type transcriptional activator [Escherichia coli
O157:H7 EDL933]
gi|12518770|gb|AAG59074.1|AE005619_7 putative DEOR-type transcriptional activator [Escherichia coli
O157:H7 str. EDL933]
Length = 269
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A Y+ DG T+ + G+T + L +
Sbjct: 86 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNH 126
>gi|290580139|ref|YP_003484531.1| lactose repressor [Streptococcus mutans NN2025]
gi|254997038|dbj|BAH87639.1| lactose repressor [Streptococcus mutans NN2025]
Length = 277
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 20/139 (14%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL------------------LADKIA 44
++ K A++A + V +G T+ +G G+T + L+ K +
Sbjct: 102 QIEEKHYIAQKAAELVEEGDTIFLGPGTTVELLAEEINKTTLQVITNCLPVFQILSQKQS 161
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
FRV ++ + I I E + + + + + A
Sbjct: 162 ETFRVHLLGGEMRSITQSFIGEITNIVLEKM-HFSKMFFSGNGVKGNEVMTSSFQEAYT- 219
Query: 105 EKIIAHAASRFIVIGDESK 123
+K+ A ++ D SK
Sbjct: 220 QKMALGRAIEKYLLIDSSK 238
>gi|254557253|ref|YP_003063670.1| transcription regulator [Lactobacillus plantarum JDM1]
gi|308181317|ref|YP_003925445.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|254046180|gb|ACT62973.1| transcription regulator [Lactobacillus plantarum JDM1]
gi|308046808|gb|ADN99351.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 251
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 40/145 (27%), Gaps = 17/145 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV-------IPSSRNTE 59
K A A V D T+ + +GST L + + + + + N
Sbjct: 73 KHKIAEAAATLVQDNETIMIESGSTCALLAEELGKSGKHVTIITISFFIANYVRNYDNIT 132
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
+ + V + ++ + I G+ +A
Sbjct: 133 VYTLGGQYQSDAQVAVGPLTKTMLANFHTEKLFLGIDGFDRNYGFYGNDIMRTDTVHAMA 192
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
A + ++ D SK LP
Sbjct: 193 DNADKTYILTDSSKFELTSTVHQLP 217
>gi|269839631|ref|YP_003324323.1| DeoR family transcriptional regulator [Thermobaculum terrenum ATCC
BAA-798]
gi|269791361|gb|ACZ43501.1| transcriptional regulator, DeoR family [Thermobaculum terrenum ATCC
BAA-798]
Length = 257
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++ KR R A QYV DG ++ + G+T E + LADK
Sbjct: 79 QVEEKRRIGRAAAQYVDDGDSIMVSGGTTTAEMIPYLADK 118
>gi|226357993|ref|YP_002787733.1| transcriptional regulator, DeoR family [Deinococcus deserti VCD115]
gi|226320236|gb|ACO48229.1| putative transcriptional regulator, DeoR family [Deinococcus
deserti VCD115]
Length = 259
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 41/142 (28%), Gaps = 23/142 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN------GFRV------- 49
KR R A + DG T+ + GSTA E L + G +
Sbjct: 81 QRAEKRRIGRAAAALIQDGETIFLDVGSTATEVARHLPPTLREVTVVTPGLNIALELEKL 140
Query: 50 ---QVIPSSRNTENFCKIHHIPLH----SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+VI + P + L +G D ++
Sbjct: 141 PHVRVIVTGGTLRRLQHSLVSPYALEILRHVHADRLFLGCNGIDAVNGITNANHEEAE-- 198
Query: 103 LREKIIAHAASRFIVIGDESKR 124
++ + A +V+ D SK
Sbjct: 199 -VKRCMVRYARTVVVLADHSKL 219
>gi|254204208|ref|ZP_04910567.1| transcriptional regulator, DeoR family [Burkholderia mallei FMH]
gi|254209180|ref|ZP_04915527.1| transcriptional regulator, DeoR family [Burkholderia mallei JHU]
gi|147745092|gb|EDK52173.1| transcriptional regulator, DeoR family [Burkholderia mallei FMH]
gi|147750403|gb|EDK57473.1| transcriptional regulator, DeoR family [Burkholderia mallei JHU]
Length = 453
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LAD+
Sbjct: 276 DAKRVIGRRAAEFVPDGASVLLDSGSTVHAVALALADRHR 315
>gi|76818666|ref|YP_335664.1| DeoR family transcriptional regulator [Burkholderia pseudomallei
1710b]
gi|76583139|gb|ABA52613.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1710b]
Length = 407
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LAD+
Sbjct: 230 DAKRVIGRRAAEFVPDGASVLLDSGSTVHAVALALADRHR 269
>gi|328765826|gb|EGF75936.1| hypothetical protein BATDEDRAFT_28950 [Batrachochytrium
dendrobatidis JAM81]
Length = 309
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M + KR A+RA + G T+ + GST LAD I + + V+ +S +
Sbjct: 126 MSLNLEEKRRIAKRAAALIQHGDTIAVDIGSTTVH----LADMIEDVQSLTVVTNSLSAA 181
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
N + + + + + I+
Sbjct: 182 NRFNLAMEEQRITGQIIMLPGVTNPYQASIKGTYTIEFLKRFHFN 226
>gi|148997045|ref|ZP_01824699.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP11-BS70]
gi|147756745|gb|EDK63785.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae SP11-BS70]
Length = 246
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 45/148 (30%), Gaps = 21/148 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRV 49
Q K+ A++A + + + + G+T + L A +
Sbjct: 77 QEKKLLAQKAASLIKEKDVIFIDAGTTTAFLIHELVNKNVIVVTNSIHHAAQLVEKQIPT 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKI 107
++ + T I + ++ + + G + +D ++
Sbjct: 137 VMVGGNVKT---ATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRA 192
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPI 135
I A + V+ D SK + P+
Sbjct: 193 ILENAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|323161220|gb|EFZ47137.1| hypothetical protein ECE128010_2601 [Escherichia coli E128010]
gi|323177894|gb|EFZ63478.1| hypothetical protein ECOK1180_3490 [Escherichia coli 1180]
Length = 245
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A Y+ DG T+ + G+T + L +
Sbjct: 62 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNH 102
>gi|25011379|ref|NP_735774.1| hypothetical protein gbs1337 [Streptococcus agalactiae NEM316]
gi|24412917|emb|CAD46996.1| unknown [Streptococcus agalactiae NEM316]
Length = 251
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 24/38 (63%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ KR A++A++ + + T+ +G G++ + F +A+K
Sbjct: 78 EAKRAVAKKAVELISERDTIFLGPGTSVEVFAEEIANK 115
>gi|89071943|ref|ZP_01158539.1| Transcriptional regulator of sugar metabolism [Photobacterium sp.
SKA34]
gi|89052044|gb|EAR57495.1| Transcriptional regulator of sugar metabolism [Photobacterium sp.
SKA34]
Length = 258
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K A V G + + +GST ++ L A +AN ++V
Sbjct: 80 KEKLGEYAASLVQSGDKIIIDSGSTTEQITHYLNPKHNLVVMTNGINIAYHLANQENIEV 139
Query: 52 IPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ S N+ + + + + L +DGFD+I +G +
Sbjct: 140 MVSGGVMRHNSYSLHGTGGEEFLAGFRFNKLFLGVDGFDKIAGITTPHQGEANI---NRK 196
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I + D SK
Sbjct: 197 MVEAAQTVIAVTDSSKF 213
>gi|329770155|ref|ZP_08261547.1| hypothetical protein HMPREF0433_01311 [Gemella sanguinis M325]
gi|328837171|gb|EGF86811.1| hypothetical protein HMPREF0433_01311 [Gemella sanguinis M325]
Length = 249
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ + K+ AR+ + + T+ +G GST L D+ + ++ +S
Sbjct: 76 NVDE-KKEIARKVAGLIKNNETIFIGAGSTTSYLAEFLQDR-----NINIVTNSMTVFEQ 129
Query: 62 CKIHH 66
K +
Sbjct: 130 FKDNP 134
>gi|237509445|ref|ZP_04522160.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
MSHR346]
gi|235001650|gb|EEP51074.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
MSHR346]
Length = 378
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 196 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 255
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 256 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 315
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 316 VAASARCVVLATTDKL 331
>gi|121597931|ref|YP_989676.1| DeoR family transcriptional regulator [Burkholderia mallei SAVP1]
gi|254200537|ref|ZP_04906902.1| transcriptional regulator, DeoR family [Burkholderia mallei FMH]
gi|254204565|ref|ZP_04910918.1| transcriptional regulator, DeoR family [Burkholderia mallei JHU]
gi|121225729|gb|ABM49260.1| transcriptional regulator, DeoR family [Burkholderia mallei SAVP1]
gi|147748149|gb|EDK55224.1| transcriptional regulator, DeoR family [Burkholderia mallei FMH]
gi|147754151|gb|EDK61215.1| transcriptional regulator, DeoR family [Burkholderia mallei JHU]
Length = 376
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 194 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 253
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 254 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 313
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 314 VAASARCVVLATTDKL 329
>gi|76817843|ref|YP_335386.1| DeoR family transcriptional regulator [Burkholderia pseudomallei
1710b]
gi|76582316|gb|ABA51790.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1710b]
Length = 315
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 133 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 192
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 193 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 252
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 253 VAASARCVVLATTDKL 268
>gi|325964634|ref|YP_004242540.1| transcriptional regulator of sugar metabolism [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470721|gb|ADX74406.1| transcriptional regulator of sugar metabolism [Arthrobacter
phenanthrenivorans Sphe3]
Length = 261
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
K+ A A V +GM +G+ G+T LA ++ NG ++ V+ +S +
Sbjct: 80 KQAIAVEAASLVQEGMAVGLSAGTTTW----ALAKELVNGPQITVVTNSVRIADLFH 132
>gi|312867316|ref|ZP_07727525.1| transcriptional regulator, DeoR family [Streptococcus parasanguinis
F0405]
gi|311097017|gb|EFQ55252.1| transcriptional regulator, DeoR family [Streptococcus parasanguinis
F0405]
Length = 248
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A++ + + +G T+ +G+G+T L G + ++ +S K
Sbjct: 79 KRTIAKKCAELIENGDTVFIGSGTTTDFIGDYL-----EGKEISIVTNSLPIFEKLKDFQ 133
Query: 67 IPLHSP 72
Sbjct: 134 NYDLIL 139
>gi|125624557|ref|YP_001033040.1| DeoR family transcriptional regulator [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493365|emb|CAL98339.1| transcriptional regulator, DeoR family [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071351|gb|ADJ60751.1| DeoR family transcriptional regulator [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 194
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 23/140 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+KR A +A + ++DG T+ + +GST LA N + N
Sbjct: 17 DLKRKIAVKAAENILDGDTVMIESGSTCALLAEELAFNRKNITIITNSVFIANYIRKSDS 76
Query: 65 HHI--------------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + V + + IDGFD + A+
Sbjct: 77 VKVILLGGEYQNNSQVNVGPLIKKVVDEFYVDKLFIGIDGFDPVRGFRSNDLARSEAI-- 134
Query: 105 EKIIAHAASRFIVIGDESKR 124
++A AA +++ D SK
Sbjct: 135 -HVMAAAAKEVVILTDASKF 153
>gi|205375654|ref|ZP_03228441.1| DNA-binding transcriptional regulator [Bacillus coahuilensis
m4-4]
Length = 210
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A Y+ DG T+ + G+T + L +
Sbjct: 27 SQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNH 67
>gi|330821042|ref|YP_004349904.1| DeoR family transcriptional regulator [Burkholderia gladioli BSR3]
gi|327373037|gb|AEA64392.1| DeoR family transcriptional regulator [Burkholderia gladioli BSR3]
Length = 256
Score = 40.3 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ KR + A Q+V G T+ + GST + ++D++
Sbjct: 79 QTEQKRRIGKLAAQFVKTGDTIFVDCGSTTPFLIDFISDELE 120
>gi|302872994|ref|YP_003841627.1| transcriptional regulator, DeoR family [Clostridium cellulovorans
743B]
gi|302575851|gb|ADL49863.1| transcriptional regulator, DeoR family [Clostridium cellulovorans
743B]
Length = 262
Score = 40.3 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A V +G ++ + G+T E + L G + V+ +
Sbjct: 92 KKAIAKYAASLVENGDSIYLDAGTTTYEMVPYL-----EGKDIVVVTNGLKHIELLIESK 146
Query: 67 IPLHSP--------EDVSSVDLSID-GFDEIDSRLRLIKGYGGAL----------LREKI 107
I + + V ++ + + D I G +++
Sbjct: 147 IEAYIIGGKIKSSTKAVVGIEAIRNLERYKFDKSFLGINGIHLIHGYTTPDAEESTLKEM 206
Query: 108 IAHAASRFIVIGDESKR 124
A+ V+ DESK
Sbjct: 207 AMKASKESFVLADESKF 223
>gi|187934785|ref|YP_001885497.1| DNA-binding protein IolR [Clostridium botulinum B str. Eklund 17B]
gi|187722938|gb|ACD24159.1| DNA-binding protein IolR [Clostridium botulinum B str. Eklund 17B]
Length = 253
Score = 40.3 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 18/138 (13%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------------IANG 46
K + A++A +++ DG ++ + +G+T + L DK +
Sbjct: 75 NSAKIDIAKKAAEFIEDGDSIFIDSGTTTLNIIDYLNDKNNITLFTNSINVILKAIPHDN 134
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + N F + ++ S I L +K
Sbjct: 135 IDIICLSGRFNRTTFSFTGLTSSDVLSTYN-INKSFMACTGISLENGLTHTSPNEFKIKK 193
Query: 107 IIAHAASRFIVIGDESKR 124
+ + + ++ D SK
Sbjct: 194 VAVSKSHKTFLLADSSKF 211
>gi|197334519|ref|YP_002157168.1| glucitol operon repressor [Vibrio fischeri MJ11]
gi|197316009|gb|ACH65456.1| glucitol operon repressor [Vibrio fischeri MJ11]
Length = 253
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K + A A++ + D + + +GST + L+ +
Sbjct: 79 KLSIAMAAVELIKDHNRIIIDSGSTTAALINQLSKR 114
>gi|251780963|ref|ZP_04823883.1| DNA-binding protein IolR [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243085278|gb|EES51168.1| DNA-binding protein IolR [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 253
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 18/138 (13%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------------IANG 46
K + A++A +++ DG ++ + +G+T + L DK +
Sbjct: 75 NSAKIDIAKKAAEFIEDGDSIFIDSGTTTLNIIDYLNDKDNITLFTNSINVILKAIPHDN 134
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + N F + ++ S I L +K
Sbjct: 135 IDIICLSGRFNRTTFSFTGLTSSDVLSTYN-INKSFMACTGISLENGLTHTSPNEFKIKK 193
Query: 107 IIAHAASRFIVIGDESKR 124
+ + + ++ D SK
Sbjct: 194 VAVSKSHKTFLLADSSKF 211
>gi|195978227|ref|YP_002123471.1| glycerol-3-phosphate regulon repressor GlpR [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225868443|ref|YP_002744391.1| DeoR family regulatory protein [Streptococcus equi subsp.
zooepidemicus]
gi|195974932|gb|ACG62458.1| glycerol-3-phosphate regulon repressor GlpR [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225701719|emb|CAW99072.1| DeoR family regulatory protein [Streptococcus equi subsp.
zooepidemicus]
Length = 237
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 16/164 (9%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTEN 60
Q+K A++A + + D + + G+T + + L K + N +
Sbjct: 67 QIKERIAQKAAELIFDNDVIFIDAGTTTEFLLPFLQSKKVTVVTNSIHHATRLVDMAIKT 126
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL---------REKIIAHA 111
++ + + V L D I G A L +K +
Sbjct: 127 IIIGGYVKQTTDASIGHVALEQIRQMNFDKAFLGINGIDEAFLTTPDMEEAVIKKAVIAN 186
Query: 112 ASRFIVIGDESKRVDFLGRGMLP---IEIDQFGVNKTLSALKEV 152
A V+ D +K + P +EI + + +
Sbjct: 187 AKITYVLADATKLGHVSFVKVAPIDRVEIITEKSSTVMLKKIKE 230
>gi|59712980|ref|YP_205756.1| DNA-bindng transcriptional repressor [Vibrio fischeri ES114]
gi|59481081|gb|AAW86868.1| DNA-bindng transcriptional repressor [Vibrio fischeri ES114]
Length = 253
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K + A A++ + D + + +GST + L+ +
Sbjct: 79 KLSIAVAAVELIKDHNRIIIDSGSTTAALINQLSKR 114
>gi|304558079|gb|ADM40743.1| Transcriptional repressor of aga operon [Edwardsiella tarda FL6-60]
Length = 234
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 44/137 (32%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSR----- 56
K A RA + V DG TL + +GST + L + N + +
Sbjct: 58 KSRIAARAAELVQDGDTLILDSGSTTAQIAPFLKAHRHLVVVTNALNIACELTGYEQIDV 117
Query: 57 ---------NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
N+ + + L +DGFD G A L ++
Sbjct: 118 LVLGGSVRPNSYSLYGQAAEQQLRQYHFDRLFLGVDGFD--LRCGITTPHAGEAQLN-RV 174
Query: 108 IAHAASRFIVIGDESKR 124
+ AS I + D SK
Sbjct: 175 MCDVASEIIAVVDASKF 191
>gi|281491285|ref|YP_003353265.1| DeoR family transcriptional regulator [Lactococcus lactis subsp.
lactis KF147]
gi|281375026|gb|ADA64544.1| Transcriptional regulator, DeoR family [Lactococcus lactis subsp.
lactis KF147]
Length = 247
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 23/140 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA------------------DKIANG 46
+KR A +A + ++DG T+ + +GST LA + ++
Sbjct: 70 DLKRKIAVKAAENILDGDTVMIESGSTCALLAEELAFNRKKVTIITNSVFIANYIRKSDS 129
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPED--VSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+V ++ + + + ++ V + + IDGFD + A+
Sbjct: 130 VKVILLGGEYQNNSQVNVGPLIKKVVDEFYVDKLFIGIDGFDPVRGFRSNDLARSEAI-- 187
Query: 105 EKIIAHAASRFIVIGDESKR 124
++A AA I++ D SK
Sbjct: 188 -HVMAAAAKEVIILTDASKF 206
>gi|239624631|ref|ZP_04667662.1| regulatory protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521017|gb|EEQ60883.1| regulatory protein [Clostridiales bacterium 1_7_47FAA]
Length = 259
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 16/148 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------IANGFR 48
+ K +A V +G + + GST++ + L ++ +A
Sbjct: 83 EQKSAITAKAASMVEEGQIIALDYGSTSQMMALTLKERFHRLTVVTNSIQNALILAENPG 142
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ +I + + + +D+ ID + + + +
Sbjct: 143 ITIILTGGVLNRDEYTLVNDFSATLESIHIDIMFMTVTGIDPVVGCTDQRLSEIRIQNQL 202
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ASR IV+ D SK + P E
Sbjct: 203 HQSASRTIVLADSSKFGKASLIKICPFE 230
>gi|126442633|ref|YP_001062729.1| transcriptional regulators of sugar metabolism [Burkholderia
pseudomallei 668]
gi|126222124|gb|ABN85629.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
668]
Length = 260
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 78 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 137
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 138 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGFADATFKRAV 197
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 198 VAASARCVVLATTDKL 213
>gi|218198897|gb|EEC81324.1| hypothetical protein OsI_24495 [Oryza sativa Indica Group]
Length = 1120
Score = 40.3 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 43/137 (31%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--------- 52
K A A YV DG L + +GST + + L + + N +
Sbjct: 81 KTLIANAAAGYVRDGEALILDSGSTTAQIVPFLKGRRDLVVMTNALNIAYELSGNDGVEV 140
Query: 53 -----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RN+ + + L +DGFD G A L ++
Sbjct: 141 MVLGGSVRRNSYSLYGPAAEQQLRQYRFDKLFLGVDGFDLSAG--ITTPHPGEAHLN-RV 197
Query: 108 IAHAASRFIVIGDESKR 124
+ A I + D SK
Sbjct: 198 MCEVAREIIAVADASKF 214
>gi|307690185|ref|ZP_07632631.1| transcriptional regulator, DeoR family protein [Clostridium
cellulovorans 743B]
Length = 249
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A V +G ++ + G+T E + L G + V+ +
Sbjct: 79 KKAIAKYAASLVENGDSIYLDAGTTTYEMVPYL-----EGKDIVVVTNGLKHIELLIESK 133
Query: 67 IPLHSP--------EDVSSVDLSID-GFDEIDSRLRLIKGYGGAL----------LREKI 107
I + + V ++ + + D I G +++
Sbjct: 134 IEAYIIGGKIKSSTKAVVGIEAIRNLERYKFDKSFLGINGIHLIHGYTTPDAEESTLKEM 193
Query: 108 IAHAASRFIVIGDESKR 124
A+ V+ DESK
Sbjct: 194 AMKASKESFVLADESKF 210
>gi|269138035|ref|YP_003294735.1| hypothetical GlpR, transcriptional regulator of sugar metabolism
[Edwardsiella tarda EIB202]
gi|267983695|gb|ACY83524.1| hypothetical GlpR, transcriptional regulator of sugar metabolism
[Edwardsiella tarda EIB202]
Length = 257
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 44/137 (32%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSR----- 56
K A RA + V DG TL + +GST + L + N + +
Sbjct: 81 KSRIAARAAELVQDGDTLILDSGSTTAQIAPFLKAHRHLVVVTNALNIACELTGYEQIDV 140
Query: 57 ---------NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
N+ + + L +DGFD G A L ++
Sbjct: 141 LVLGGSVRPNSYSLYGQAAEQQLRQYHFDRLFLGVDGFD--LRCGITTPHAGEAQLN-RV 197
Query: 108 IAHAASRFIVIGDESKR 124
+ AS I + D SK
Sbjct: 198 MCDVASEIIAVVDASKF 214
>gi|188590315|ref|YP_001920644.1| DNA-binding protein IolR [Clostridium botulinum E3 str. Alaska E43]
gi|188500596|gb|ACD53732.1| DNA-binding protein IolR [Clostridium botulinum E3 str. Alaska E43]
Length = 253
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 18/138 (13%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------------IANG 46
K + A++A +++ DG ++ + +G+T + L DK +
Sbjct: 75 NSAKIDIAKKAAEFIEDGDSIFIDSGTTTLNIIDYLNDKNNITLFTNSINVILKAIPHDN 134
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + N F + ++ S I L +K
Sbjct: 135 IDIICLSGRFNRTTFSFTGLTSSDVLSTYN-INKSFMACTGISLENGLTHTSPNEFKIKK 193
Query: 107 IIAHAASRFIVIGDESKR 124
+ + + ++ D SK
Sbjct: 194 VAVSKSHKTFLLADSSKF 211
>gi|307307603|ref|ZP_07587335.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
BL225C]
gi|306901729|gb|EFN32330.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
BL225C]
Length = 263
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 28/187 (14%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQ 50
KR A A +++ T+ + G+T + + L+ A+++ ++
Sbjct: 80 AKRQACIHAARHIRPDETIFIDCGTTLEYLVELIPDDYAITAICYSLNTAERLTRKTNLR 139
Query: 51 VIPSSRNTENFCKIHHI-PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE---- 105
++ P D ++++ ID +G E
Sbjct: 140 MVMLGGVYHPSSASFSGAPGIETLDQLGINVAFLSAAGIDPA----RGATCVHFHEVPVK 195
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR 165
+ + A ++ D SK P ++ E A L +
Sbjct: 196 QKVISLARENYLVADSSKLGKLKAAFFAP----PSAFRSLITEHGETALAADLMPVPGMY 251
Query: 166 RNGSGLF 172
+G
Sbjct: 252 ESGQPRL 258
>gi|291550854|emb|CBL27116.1| Transcriptional regulators of sugar metabolism [Ruminococcus
torques L2-14]
Length = 254
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 16/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA---------------DKIANGFRV 49
+ K+ A+ A + + + + + G+T + L A G +V
Sbjct: 81 EEKKKIAQYAAELIEEEDFIYLDAGTTTGYMIDALGHTNAVFVTNAVSHAQRLAAKGIKV 140
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+I I + + ++ + AL+++ I
Sbjct: 141 FLIGGELKNSTEAVIGAQAMKNLQEYHFTKGFFGANGITKAEGFTTPDANEALVKQTAIE 200
Query: 110 HAASRFIVIGDESKR 124
+RF+ + D SK
Sbjct: 201 RCRNRFV-LADHSKF 214
>gi|332523443|ref|ZP_08399695.1| putative HTH-type transcriptional regulator IolR [Streptococcus
porcinus str. Jelinkova 176]
gi|332314707|gb|EGJ27692.1| putative HTH-type transcriptional regulator IolR [Streptococcus
porcinus str. Jelinkova 176]
Length = 237
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 13/143 (9%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTENFC 62
K+ A++A ++V+D + + G+T + + L K + N RN +
Sbjct: 69 KQKLAKKASEFVLDNDVIFIDAGTTTEFLIPQLCQKNLTVVTNSIHHAAKLVDRNIKTII 128
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL---------REKIIAHAAS 113
+ + + +V L D + G + ++ I A
Sbjct: 129 IGGFVKQTTDASIGNVALEQIQQMNFDKAFLGMNGLDNFYMTTPDMEEAVIKRTIISNAK 188
Query: 114 RFIVIGDESKRVDFLGRGMLPIE 136
V+ D SK + PIE
Sbjct: 189 MSYVLADSSKIGYVSFVKVAPIE 211
>gi|227873804|ref|ZP_03992030.1| DeoR family transcriptional regulator [Oribacterium sinus F0268]
gi|227840346|gb|EEJ50750.1| DeoR family transcriptional regulator [Oribacterium sinus F0268]
Length = 271
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 23/139 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS-RNTENFCK 63
+ K+ A+RA++ + D + + G T LA + + V+ +
Sbjct: 95 EAKKRIAQRALELIKDTKVIFLDAG-TTN---RELALLLKEREGLSVVTTDLMVAGVLQS 150
Query: 64 IHHIPLHSPEDVS------------------SVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
++ S D++ G I+ +L L + +
Sbjct: 151 GKGRIFFCGGEIQKSTGSALGSYTVNQLRDYSFDIAFLGASSINEKLELSTPTLEKVALK 210
Query: 106 KIIAHAASRFIVIGDESKR 124
K I A + +++ D SK
Sbjct: 211 KAILQQAKQSVLLADASKF 229
>gi|78061227|ref|YP_371135.1| DeoR family transcriptional regulator [Burkholderia sp. 383]
gi|77969112|gb|ABB10491.1| transcriptional regulator, DeoR family [Burkholderia sp. 383]
Length = 252
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
+ KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 75 EAKRTIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITPDGECTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA +++ D SK
Sbjct: 194 MIAAAGTAMIVADHSKF 210
>gi|329920101|ref|ZP_08276932.1| transcriptional regulator, DeoR family [Lactobacillus iners SPIN
1401G]
gi|328936555|gb|EGG32999.1| transcriptional regulator, DeoR family [Lactobacillus iners SPIN
1401G]
Length = 245
Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFR--VQVIPSSRN 57
+ K+ A+ A +V DG + + G+T E + L DK + NG + I
Sbjct: 77 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFLRDKKDLTVVTNGIDAAIACIELGIR 136
Query: 58 TENF---CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------REK 106
T+ K + + + S G G +K
Sbjct: 137 TKILGGTIKKKTHATIGTQTCQQLMQFNFNASFLGSNG---LGSNGCYTTPDCAEADIKK 193
Query: 107 IIAHAASRFIVIGDESK 123
+ ++ D+SK
Sbjct: 194 QAVDCSKVTFILMDKSK 210
>gi|328887374|emb|CCA60613.1| DeoR-family transcriptional regulator [Streptomyces venezuelae ATCC
10712]
Length = 273
Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG 46
KR A + G +G+ G+T E LA + A G
Sbjct: 78 KRRIAETVADLIAPGEVVGLNGGTTTTEVARALALRFAGG 117
>gi|295681019|ref|YP_003609593.1| DeoR family transcriptional regulator [Burkholderia sp. CCGE1002]
gi|295440914|gb|ADG20082.1| transcriptional regulator, DeoR family [Burkholderia sp. CCGE1002]
Length = 251
Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 16/135 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-ADKIANGFRVQVIPSSRNTENFCKI 64
KR ARRA++ + G T+ + G+T+ + L AD A ++ + C
Sbjct: 76 AKRRIARRAVELIAPGQTVIVDGGTTSALLVQELPADLHATIVTHSPSVATALAAHPCVD 135
Query: 65 HHIPLHSPEDVSSVDL---------------SIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ S V + G + L G ++ +A
Sbjct: 136 VILIGGRLYKHSIVAVGAAAMEGIARIHADLYFMGVTGVHPSAGLSTGDFEEAAIKRALA 195
Query: 110 HAASRFIVIGDESKR 124
A+ +V+ SK
Sbjct: 196 ARAAETVVLASSSKL 210
>gi|288870556|ref|ZP_06114546.2| transcriptional regulator, DeoR family [Clostridium hathewayi DSM
13479]
gi|288866709|gb|EFC99007.1| transcriptional regulator, DeoR family [Clostridium hathewayi DSM
13479]
Length = 287
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIANGFRVQVIPSS 55
K+ A+ A +V +G T+ + +G+T L+D I + +
Sbjct: 112 KKQIAKLAASFVHEGDTILLDSGTTTYYLASELSDVPNLTVITYDLFIGGNLTLHPTSTM 171
Query: 56 RNTENFCKIHHIPLHSPEDVS------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
T + + + V VD + G D ID + ++++
Sbjct: 172 IVTGGIRRQGYNNVLLGSMVEDYVRNIRVDKAFLGADAIDVDFGISNTNVMEASIKRLLV 231
Query: 110 HAASRFIVIGDESKR 124
A + I+IGD SK
Sbjct: 232 QAGKQVILIGDHSKM 246
>gi|317048116|ref|YP_004115764.1| DeoR family transcriptional regulator [Pantoea sp. At-9b]
gi|316949733|gb|ADU69208.1| transcriptional regulator, DeoR family [Pantoea sp. At-9b]
Length = 256
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 38/137 (27%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGFRV 49
K A+ A + DG + + +GST L K +
Sbjct: 80 KFAIAKAAAGLINDGEAVIIDSGSTTSLMTKHLESKKDLVVMTNAINIAYELASRENIHL 139
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDV--SSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
V+ + + ++ + L +DGFD G +
Sbjct: 140 MVLGGNVRSASWSIDGPTAEQHIRQYRFDKLFLGVDGFDLASGITTPQLGEAQI---NRA 196
Query: 108 IAHAASRFIVIGDESKR 124
+ + I + D SK
Sbjct: 197 MCDVSREIIAVADSSKF 213
>gi|156743396|ref|YP_001433525.1| DeoR family transcriptional regulator [Roseiflexus castenholzii DSM
13941]
gi|156234724|gb|ABU59507.1| transcriptional regulator, DeoR family [Roseiflexus castenholzii
DSM 13941]
Length = 265
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 28/156 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K AR A + + DG T+ + ST + A +IA+ + VI + +
Sbjct: 89 EEKERIARAAARLINDGDTVMLDA-STTAYAI---ARQIADRRNLTVITNGMHLALSLGA 144
Query: 65 HHIPLHSP------EDVSSVDLSIDGFDEIDSRLRLIKGYGGA--LLREKIIAHAA---- 112
H D S+ ++ +E+ RL KG+ A L K + ++
Sbjct: 145 HPSITTIVIGGQVRGDTGSLTGTL--AEEMLQRLHADKGFFSARGLTLAKGLTESSIPEG 202
Query: 113 ----------SRFIVIGDESKRVDFLGRGMLPIEID 138
+ I + D SK P+E
Sbjct: 203 LLKAAMVRHVDQVIAVLDSSKLGVSSLTSFCPVEAI 238
>gi|229161870|ref|ZP_04289848.1| Transcriptional regulator, DeoR [Bacillus cereus R309803]
gi|228621671|gb|EEK78519.1| Transcriptional regulator, DeoR [Bacillus cereus R309803]
Length = 239
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 22/142 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A + V D + + G+T + + + D+ IP+ +
Sbjct: 57 EEKRKIAMEASKLVEDNDIIAIEIGTTTMQILDYIYDRKNLTILTNSIPAVNKIIELKEQ 116
Query: 65 HHIPLHSPE----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ D +V+ D I L Y
Sbjct: 117 YDSFDCRLIVIGGILNTNSLALSGEMTLNYLDHFTVNKLFASCDGISLEKELTCSYIEDA 176
Query: 103 LREKIIAHAASRFIVIGDESKR 124
K + + A + +++ DESK
Sbjct: 177 QIYKQLKNNAKQVVMMADESKF 198
>gi|257413146|ref|ZP_04742139.2| lactose phosphotransferase system repressor [Roseburia intestinalis
L1-82]
gi|257204575|gb|EEV02860.1| lactose phosphotransferase system repressor [Roseburia intestinalis
L1-82]
Length = 255
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 26/151 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K A+ A + G + + G+T + + + A V ++ T
Sbjct: 88 AKEKIAKYAAGLIEPGDFVYIDAGTTTDLMIDFITVRQA------VFVTNAITHAKKLAQ 141
Query: 66 HIPLHSP--EDVSSVDLSIDGFDEIDS--RLRLIKGYGGAL----------------LRE 105
+ +V +I G + + S + KG+ GA L +
Sbjct: 142 KGCTVYILGGEFKTVTEAIVGEEAVSSVEKYNFTKGFWGANGISVQRGFSTPELKEALVK 201
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K ++ D+SK P E
Sbjct: 202 KRSMENCRECYILADDSKFNQISSVTFAPFE 232
>gi|157370817|ref|YP_001478806.1| DeoR family transcriptional regulator [Serratia proteamaculans 568]
gi|157322581|gb|ABV41678.1| transcriptional regulator, DeoR family [Serratia proteamaculans
568]
Length = 256
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 40/137 (29%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMI-------------------LLADKIANGF 47
K A A + V DG + + +GST + LA+
Sbjct: 80 KYAIACAAAELVKDGDAIILDSGSTTSQMAQQLVGKKDLVVMTNALNIAFELANNEQVDL 139
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
V R + + + L +DGFD I G A L +
Sbjct: 140 MVVGGSVRRKSWSLYGPAAEQHMRQFRFDKLFLGVDGFDLISG--ITTPDPGEAQLN-RA 196
Query: 108 IAHAASRFIVIGDESKR 124
+ A I + D SK
Sbjct: 197 MCDVAREVIAVADASKF 213
>gi|326388682|ref|ZP_08210275.1| urea carboxylase [Novosphingobium nitrogenifigens DSM 19370]
gi|326206933|gb|EGD57757.1| urea carboxylase [Novosphingobium nitrogenifigens DSM 19370]
Length = 1210
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 4/142 (2%)
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRV 125
+P+ D S+ + F I + L + ++ + + V
Sbjct: 710 DMPIILGPDGPSLGGFVCPFVVIQADLWKVGQLSPGDTVRFEPVAESAARAAEVAQDRLV 769
Query: 126 DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGLFVSDGGNYIVDAFF 185
+ L P+ D V+ L + G+ E+ RR G + + G ++D
Sbjct: 770 ETLDVLAPPVSSDAPPVSPVL----HTIAAQGVRPEVTYRRQGDRHLLVEYGPIVLDLEL 825
Query: 186 GFIPDPQIISGELCNIPGVIEH 207
++ + +PGVI+
Sbjct: 826 RLRVHALMLELDALGLPGVIDV 847
>gi|260888271|ref|ZP_05899534.1| transcriptional regulator, DeoR family [Selenomonas sputigena ATCC
35185]
gi|330838396|ref|YP_004412976.1| transcriptional regulator, DeoR family [Selenomonas sputigena ATCC
35185]
gi|260861807|gb|EEX76307.1| transcriptional regulator, DeoR family [Selenomonas sputigena ATCC
35185]
gi|329746160|gb|AEB99516.1| transcriptional regulator, DeoR family [Selenomonas sputigena ATCC
35185]
Length = 254
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 4/121 (3%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR A A++ + GMT+ G+T +AD++ + + + +
Sbjct: 77 EVKRRIAEAALRQIRPGMTVFFDAGTTTF----EIADRLKKAAPANITVVTNDLHIGAHL 132
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKR 124
+ + V L G + YG L A F+V+ ESK
Sbjct: 133 YSQTEIRTVLLGGVVLPETGAVAGAMATEQLVRYGIDLAFVGTSAVTEDFFLVVPTESKC 192
Query: 125 V 125
V
Sbjct: 193 V 193
>gi|257463602|ref|ZP_05627993.1| DeoR family transcriptional regulator [Fusobacterium sp. D12]
gi|317061156|ref|ZP_07925641.1| transcriptional regulator [Fusobacterium sp. D12]
gi|313686832|gb|EFS23667.1| transcriptional regulator [Fusobacterium sp. D12]
Length = 255
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 18/138 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++K++ A++A++ + MT+ + G+T E L+A RV E + K
Sbjct: 77 EIKKSIAKKALEEIHSNMTIILDAGTTTYELACLIAQAEIQNLRVITNDLYIALELYRKE 136
Query: 65 H-------------HIPLHSPEDVSSV-----DLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ S V + D++ G I L + + ++
Sbjct: 137 NIHILLLGGEISLETGATDSIVSVKQIENYNADIAFLGISSISENLDITVPTETKAILKR 196
Query: 107 IIAHAASRFIVIGDESKR 124
+ + + I++ D+SK
Sbjct: 197 TMMKISEKSILLADQSKF 214
>gi|53717406|ref|YP_105489.1| DeoR family transcriptional regulator [Burkholderia mallei ATCC
23344]
gi|67639952|ref|ZP_00438778.1| transcriptional regulator, DeoR family [Burkholderia mallei GB8
horse 4]
gi|121597574|ref|YP_990186.1| DeoR family transcriptional regulator [Burkholderia mallei SAVP1]
gi|124382663|ref|YP_001024504.1| DeoR family transcriptional regulator [Burkholderia mallei NCTC
10229]
gi|126443683|ref|YP_001063085.1| DeoR family transcriptional regulator [Burkholderia pseudomallei
668]
gi|126446730|ref|YP_001078825.1| DeoR family transcriptional regulator [Burkholderia mallei NCTC
10247]
gi|126457536|ref|YP_001076029.1| DeoR family transcriptional regulator [Burkholderia pseudomallei
1106a]
gi|134282172|ref|ZP_01768878.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
305]
gi|167002731|ref|ZP_02268521.1| transcriptional regulator, DeoR family [Burkholderia mallei PRL-20]
gi|167743102|ref|ZP_02415876.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 14]
gi|167850105|ref|ZP_02475613.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei B7210]
gi|167907053|ref|ZP_02494258.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei NCTC 13177]
gi|217425175|ref|ZP_03456670.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
576]
gi|237510397|ref|ZP_04523112.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
MSHR346]
gi|242311921|ref|ZP_04810938.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1106b]
gi|254174201|ref|ZP_04880863.1| transcriptional regulator, DeoR family [Burkholderia mallei ATCC
10399]
gi|254193605|ref|ZP_04900037.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
S13]
gi|254263011|ref|ZP_04953876.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1710a]
gi|254301530|ref|ZP_04968974.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
406e]
gi|254355536|ref|ZP_04971816.1| transcriptional regulator, DeoR family [Burkholderia mallei
2002721280]
gi|52423376|gb|AAU46946.1| transcriptional regulator, DeoR family [Burkholderia mallei ATCC
23344]
gi|121225372|gb|ABM48903.1| transcriptional regulator, DeoR family [Burkholderia mallei SAVP1]
gi|124290683|gb|ABM99952.1| transcriptional regulator, DeoR family [Burkholderia mallei NCTC
10229]
gi|126223174|gb|ABN86679.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
668]
gi|126231304|gb|ABN94717.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1106a]
gi|126239584|gb|ABO02696.1| transcriptional regulator, DeoR family [Burkholderia mallei NCTC
10247]
gi|134246701|gb|EBA46789.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
305]
gi|148023629|gb|EDK82691.1| transcriptional regulator, DeoR family [Burkholderia mallei
2002721280]
gi|157810811|gb|EDO87981.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
406e]
gi|160695247|gb|EDP85217.1| transcriptional regulator, DeoR family [Burkholderia mallei ATCC
10399]
gi|169650356|gb|EDS83049.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
S13]
gi|217391780|gb|EEC31807.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
576]
gi|235002602|gb|EEP52026.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
MSHR346]
gi|238520577|gb|EEP84036.1| transcriptional regulator, DeoR family [Burkholderia mallei GB8
horse 4]
gi|242135160|gb|EES21563.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1106b]
gi|243061617|gb|EES43803.1| transcriptional regulator, DeoR family [Burkholderia mallei PRL-20]
gi|254214013|gb|EET03398.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1710a]
Length = 252
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LAD+
Sbjct: 75 DAKRVIGRRAAEFVPDGASVLLDSGSTVHAVALALADRHR 114
>gi|330937330|gb|EGH41330.1| regulatory protein, DeoR [Pseudomonas syringae pv. pisi str. 1704B]
Length = 255
Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A+ + + + + +GST + L + V + S ++ H
Sbjct: 78 KQAIARAAVCRIREHARIIVDSGSTTAALIPELCQQPG---LVVMTNSLHVARALTELEH 134
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D + L
Sbjct: 135 EPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVRGTTTF----NELLG 190
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A +V+ + K + LP
Sbjct: 191 LSRVMAEVAREVVVMVEADKVGRKIPNLELP 221
>gi|261821655|ref|YP_003259761.1| AgaR family transcriptional regulator [Pectobacterium wasabiae
WPP163]
gi|261605668|gb|ACX88154.1| transcriptional regulator, DeoR family [Pectobacterium wasabiae
WPP163]
Length = 269
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 42/139 (30%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+KR+ AR A + G + + +G+T +A + N V + + N N
Sbjct: 92 LKRSIARVAANLIKPGHRVILDSGTTTY----EIARHMRNHKEVIAMTNGMNVANALLEA 147
Query: 66 H----IPLHSPEDVSSVDLSIDGFDEIDSRLRL---IKGYGGALLRE------------- 105
+ S+ D ++ G L
Sbjct: 148 EGVELLTTGGHLRRQSLSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGISTHNEDEARLN 207
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A R IV+ D +K
Sbjct: 208 RRMCEVAERIIVVTDSTKF 226
>gi|222147879|ref|YP_002548836.1| transcriptional regulator DeoR family [Agrobacterium vitis S4]
gi|221734867|gb|ACM35830.1| transcriptional regulator DeoR family [Agrobacterium vitis S4]
Length = 251
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 16/145 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGST----AKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K+ A RA+ V G + + G+T A+ L + + R ++
Sbjct: 77 KQALATRAVALVQPGQMIFLDGGTTNAEIARLLPQNLGLTVMTHSPTIAVELERRSDIEV 136
Query: 63 KIHHIPLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ L+ V+ L G + + + G ++IIA
Sbjct: 137 ILIGGRLYRHSMVAVGAVAAEAIARLRPHLFFLGATSVHPQHGVTTGDAEEAAIKRIIAS 196
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
++ + K +LP+
Sbjct: 197 VSAETYLCLTSEKLDTLSPCQILPL 221
>gi|70725840|ref|YP_252754.1| lactose phosphotransferase system repressor [Staphylococcus
haemolyticus JCSC1435]
gi|68446564|dbj|BAE04148.1| lactose phosphotransferase system repressor [Staphylococcus
haemolyticus JCSC1435]
Length = 251
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV 51
KR AR+A+ + + T+ +G G+T + LLA I +
Sbjct: 80 KRAVARKAVNLIEENDTIFLGPGTT----IELLAQLIERESLTVI 120
>gi|330819889|ref|YP_004348751.1| transcriptional regulator, DeoR family [Burkholderia gladioli BSR3]
gi|327371884|gb|AEA63239.1| transcriptional regulator, DeoR family [Burkholderia gladioli BSR3]
Length = 256
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 48/174 (27%), Gaps = 25/174 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN--------- 57
KR AR A Y+ G TL + G+T L + +
Sbjct: 76 KRALARGAQAYIGSGQTLFIDAGTTTAILAEALGSLSGLHVVTNSVAVANELSGERAAKS 135
Query: 58 ----------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
T N + +V D + + G + E
Sbjct: 136 GGHSVHLLGGTFNASIGATYGGAAIAEVHR--FYADVALLSPVGVDALHGATSFVQEEAE 193
Query: 108 IAHA----ASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFG 157
+A A A + IV+ D SK PIE V T +A A G
Sbjct: 194 MADAMSRNARQTIVLADYSKIGVRSRVVSCPIERISAIVTNTRAAKSPHAQALG 247
>gi|302337546|ref|YP_003802752.1| DeoR family transcriptional regulator [Spirochaeta smaragdinae DSM
11293]
gi|301634731|gb|ADK80158.1| transcriptional regulator, DeoR family [Spirochaeta smaragdinae DSM
11293]
Length = 254
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 22/142 (15%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMI-------------------LLAD 41
M+ L K + ++A +++ DG + + +GST E LL
Sbjct: 73 MENLDKKISIGKKAAEFIHDGDAIILDSGSTVTEAAKNIVARKNLKVITNSLNITLLLGA 132
Query: 42 KIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
+ ++ + T + + V + L+ G I + L+
Sbjct: 133 EPSHEVHLTGGEFKAPTLSLTGEKAAEFIANTFVDKLFLATAG---ISLKAGLMYPGFSD 189
Query: 102 LLREKIIAHAASRFIVIGDESK 123
L ++ + AA ++ D +K
Sbjct: 190 LPVKRAMIDAAETVYLLADSTK 211
>gi|220913913|ref|YP_002489222.1| DeoR family transcriptional regulator [Arthrobacter
chlorophenolicus A6]
gi|219860791|gb|ACL41133.1| transcriptional regulator, DeoR family [Arthrobacter
chlorophenolicus A6]
Length = 267
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
KR A A V +GM +G+ G+T LA ++ NG + V+ +S +
Sbjct: 80 KRAIAVEAAALVQEGMAVGLSAGTTTW----ALAKELVNGPPITVVTNSVRIADLFH 132
>gi|293394924|ref|ZP_06639214.1| glucitol operon repressor [Serratia odorifera DSM 4582]
gi|291422675|gb|EFE95914.1| glucitol operon repressor [Serratia odorifera DSM 4582]
Length = 257
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIANGF------ 47
+ KR A A+ + DG +L GST + + LA I N
Sbjct: 76 EKKRQIAYAAVALINDGDSLIFDAGSTVLQMVPHLAQFNNITVMTNSLHIVNALVELDND 135
Query: 48 ---RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + + +F ++ + DG D + +
Sbjct: 136 QTILMPGGTYRKKSASFHGSLAESAFQQFSFDTLFIGADGVDL----NAGVTTFNEVHNV 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
K + AA R +++ D SK
Sbjct: 192 SKAMCEAAGRIVLLVDSSKF 211
>gi|53722252|ref|YP_111237.1| transcriptional regulator [Burkholderia pseudomallei K96243]
gi|124382220|ref|YP_001024182.1| DeoR family transcriptional regulator [Burkholderia mallei NCTC
10229]
gi|254174521|ref|ZP_04881183.1| transcriptional regulator, DeoR family [Burkholderia mallei ATCC
10399]
gi|254193562|ref|ZP_04899996.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
S13]
gi|52212666|emb|CAH38696.1| putative transcriptional regulator [Burkholderia pseudomallei
K96243]
gi|160695567|gb|EDP85537.1| transcriptional regulator, DeoR family [Burkholderia mallei ATCC
10399]
gi|169650315|gb|EDS83008.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
S13]
Length = 260
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 78 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 137
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 138 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 197
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 198 VAASARCVVLATTDKL 213
>gi|325912671|ref|ZP_08175054.1| transcriptional regulator, DeoR family [Lactobacillus iners UPII
60-B]
gi|325478092|gb|EGC81221.1| transcriptional regulator, DeoR family [Lactobacillus iners UPII
60-B]
Length = 245
Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFR--VQVIPSSRN 57
+ K+ A+ A +V DG + + G+T E + L DK + NG + I
Sbjct: 77 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFLRDKKDLTVVTNGIDAAIACIELGIR 136
Query: 58 TENF---CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------REK 106
T+ K + + + S G G +K
Sbjct: 137 TKILGGTIKKKTHATIGTQTCQQLMQFNFNASFLGSNG---LGSNGCYTTPDCAEADIKK 193
Query: 107 IIAHAASRFIVIGDESK 123
+ ++ D+SK
Sbjct: 194 QAVDCSKVTFILMDKSK 210
>gi|309803287|ref|ZP_07697384.1| transcriptional regulator, DeoR family [Lactobacillus iners LactinV
11V1-d]
gi|325912065|ref|ZP_08174463.1| transcriptional regulator, DeoR family [Lactobacillus iners UPII
143-D]
gi|308164795|gb|EFO67045.1| transcriptional regulator, DeoR family [Lactobacillus iners LactinV
11V1-d]
gi|325476015|gb|EGC79183.1| transcriptional regulator, DeoR family [Lactobacillus iners UPII
143-D]
Length = 245
Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFR--VQVIPSSRN 57
+ K+ A+ A +V DG + + G+T E + L DK + NG + I
Sbjct: 77 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFLRDKKDLTVVTNGIDAAIACIELGIR 136
Query: 58 TENF---CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------REK 106
T+ K + + + S I G +K
Sbjct: 137 TKILGGTIKKKTHATIGTQTCQQLMQFNFNASFLGSNGLGING---CYTTPDCAEADIKK 193
Query: 107 IIAHAASRFIVIGDESK 123
+ ++ D+SK
Sbjct: 194 QAVDCSKVTFILMDKSK 210
>gi|188025426|ref|ZP_02958569.2| hypothetical protein PROSTU_00316 [Providencia stuartii ATCC 25827]
gi|188023738|gb|EDU61778.1| hypothetical protein PROSTU_00316 [Providencia stuartii ATCC 25827]
Length = 272
Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
MD ++K A++A ++V DG +L + +GST E + L
Sbjct: 91 MD-REIKTRIAKKAAEFVNDGDSLIIDSGSTTAEIVPFLKHH 131
>gi|167922858|ref|ZP_02509949.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei BCC215]
gi|254191054|ref|ZP_04897559.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
Pasteur 52237]
gi|254301714|ref|ZP_04969157.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
406e]
gi|157811692|gb|EDO88862.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
406e]
gi|157938727|gb|EDO94397.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
Pasteur 52237]
Length = 260
Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 78 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 137
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 138 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 197
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 198 VAASARCVVLATTDKL 213
>gi|24376214|ref|NP_720258.1| DeoR family transcriptional regulator [Shewanella oneidensis MR-1]
gi|24351271|gb|AAN57701.1|AE015906_8 transcriptional regulator, DeoR family [Shewanella oneidensis MR-1]
Length = 256
Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A Q + D + + +G+T + L K +AN
Sbjct: 78 KLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNQKRGLVVMTNALHLANAIHELENEPT 137
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + + + + DG D + G + K
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLARGTTTFNELTGLS----K 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A + IV+ D K + LP
Sbjct: 194 VMAEVSREVIVMVDSDKIGKRIPNLELP 221
>gi|18309066|ref|NP_561000.1| transcription repressor of myo-inositol catabolism operon
[Clostridium perfringens str. 13]
gi|168207727|ref|ZP_02633732.1| putative transcriptional regulator IolR [Clostridium perfringens E
str. JGS1987]
gi|168215025|ref|ZP_02640650.1| putative transcriptional regulator IolR [Clostridium perfringens
CPE str. F4969]
gi|169342233|ref|ZP_02863316.1| putative transcriptional regulator IolR [Clostridium perfringens C
str. JGS1495]
gi|182420545|ref|ZP_02643806.2| putative transcriptional regulator IolR [Clostridium perfringens
NCTC 8239]
gi|182625981|ref|ZP_02953745.1| putative transcriptional regulator IolR [Clostridium perfringens D
str. JGS1721]
gi|18143741|dbj|BAB79790.1| transcription repressor of myo-inositol catabolism operon
[Clostridium perfringens str. 13]
gi|169299717|gb|EDS81774.1| putative transcriptional regulator IolR [Clostridium perfringens C
str. JGS1495]
gi|170660953|gb|EDT13636.1| putative transcriptional regulator IolR [Clostridium perfringens E
str. JGS1987]
gi|170713553|gb|EDT25735.1| putative transcriptional regulator IolR [Clostridium perfringens
CPE str. F4969]
gi|177908788|gb|EDT71295.1| putative transcriptional regulator IolR [Clostridium perfringens D
str. JGS1721]
gi|182379824|gb|EDT77303.1| putative transcriptional regulator IolR [Clostridium perfringens
NCTC 8239]
Length = 256
Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 40/134 (29%), Gaps = 16/134 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
K + A +++ DG ++ + +G+T + L DK + + ++ ++
Sbjct: 77 KLALGKAAAEFIEDGDSIFLDSGTTTVNIIDFLKDKKDITIFTNSVTAICKGIHYNNLNI 136
Query: 66 ----------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE-----KIIAH 110
+ + +K +E K
Sbjct: 137 ICLSGILNRKTQSFTGLHSTDILKSYNINKCFMACTGISLKRGVTNSTKEEFKIKKTAIS 196
Query: 111 AASRFIVIGDESKR 124
++ ++ D+SK
Sbjct: 197 RSAECFLLADQSKF 210
>gi|317497723|ref|ZP_07956038.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895057|gb|EFV17224.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 253
Score = 39.9 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 40/137 (29%), Gaps = 15/137 (10%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-------S 54
D K+ AR+A+ ++ + + + TGST + L + IP S
Sbjct: 76 DEHDAKKRIARKALSFIPEHGFIYLDTGSTTLSLALELKNLSGYTIITNSIPVLTTLIDS 135
Query: 55 SRNTENFCKIHHIPLHSPEDVS--------SVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + + V VD++ G + +
Sbjct: 136 KNHLIFLGGECNAEIMCSVGVQVIELLKTLRVDIAFLGSAGFEQHHGPATNAFADGQIKS 195
Query: 107 IIAHAASRFIVIGDESK 123
A IV+ D K
Sbjct: 196 CAISCAQTSIVLCDSRK 212
>gi|294637033|ref|ZP_06715348.1| deoxyribose operon repressor [Edwardsiella tarda ATCC 23685]
gi|291089730|gb|EFE22291.1| deoxyribose operon repressor [Edwardsiella tarda ATCC 23685]
Length = 254
Score = 39.9 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 28/159 (17%)
Query: 2 DALQM----KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
D + KR+ A + V + G+T + I + S N
Sbjct: 72 DQQEKQVKEKRHIGALAAKQVQQDDVVFFDCGTTVPFIIDA----IDEQLHFTGVCYSLN 127
Query: 58 TENFCKIHH-----IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA----------- 101
T + + S++ ++ DG E+D+ + A
Sbjct: 128 TFLALQSKPHCRVILCGGIFNPDSAIFVASDGASELDNLCPTLAFVSAAGISIKQGATCY 187
Query: 102 ----LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ ++ + R I+I D SK + + P+E
Sbjct: 188 NLDEITMKRKALLCSRRTILIADASKFGEVRSAWIAPLE 226
>gi|227535943|ref|ZP_03965992.1| DeoR family transcriptional regulator [Sphingobacterium
spiritivorum ATCC 33300]
gi|300771650|ref|ZP_07081525.1| DeoR family transcriptional regulator [Sphingobacterium
spiritivorum ATCC 33861]
gi|227244186|gb|EEI94201.1| DeoR family transcriptional regulator [Sphingobacterium
spiritivorum ATCC 33300]
gi|300761639|gb|EFK58460.1| DeoR family transcriptional regulator [Sphingobacterium
spiritivorum ATCC 33861]
Length = 247
Score = 39.9 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 52/150 (34%), Gaps = 18/150 (12%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------AN 45
A + K+ AR++I + +GMT+ +G G+T E ++ + I
Sbjct: 72 AKESKKEIARKSISLIQNGMTVLVGGGTTVIELARIIPEDIQCTFFTISPLVALELAEKE 131
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
V I + ++ ++ VDL I G + + + + +
Sbjct: 132 NIEVISIGGKLSRNTNIVTGAQVINELSEI-KVDLCILGTNSLSIDDGITDSDWEVVQIK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ + + + ++ K + P+
Sbjct: 191 RAMIKCSHKVAILSIAEKLNSNQKMKVAPL 220
>gi|319945689|ref|ZP_08019940.1| DeoR family transcriptional regulator [Streptococcus australis ATCC
700641]
gi|319748049|gb|EFW00292.1| DeoR family transcriptional regulator [Streptococcus australis ATCC
700641]
Length = 247
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 55/179 (30%), Gaps = 30/179 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K+ A+ A + + D T+ + +GST + N V+++ +S ++
Sbjct: 68 QYDTKKRIAKEAAKLIKDNDTVLIESGSTCALLAEEICQTKKN---VKIVTNSYFIADYI 124
Query: 63 KIHHIPLHSP----------EDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREKIIAHA 111
+ + V + + + + GY L K + +
Sbjct: 125 QEYDSCKIILLGGEFQKESRVTVGPLLKELIRSFRVPFAFVGVDGYDDELGFTGKDMMRS 184
Query: 112 ---------ASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEE 161
+ +V+ D SK + +F +++ + + E+
Sbjct: 185 EVVQAMSDVSKEVVVLTDSSKFGKCGT-------VRRFALSQVSRVITDKNISQEAKEK 236
>gi|302191213|ref|ZP_07267467.1| lactose transport regulator [Lactobacillus iners AB-1]
gi|312871814|ref|ZP_07731902.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
3008A-a]
gi|312872990|ref|ZP_07733050.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
2062A-h1]
gi|312874180|ref|ZP_07734214.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
2052A-d]
gi|311090250|gb|EFQ48660.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
2052A-d]
gi|311091512|gb|EFQ49896.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
2062A-h1]
gi|311092756|gb|EFQ51112.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
3008A-a]
Length = 250
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFR--VQVIPSSRN 57
+ K+ A+ A +V DG + + G+T E + L DK + NG + I
Sbjct: 77 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFLRDKKDLTVVTNGIDAAIACIELGIR 136
Query: 58 TENF---CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------REK 106
T+ K + + + S G G +K
Sbjct: 137 TKILGGTIKKKTHATIGTQTCQQLMQFNFNASFLGSNG---LGSNGCYTTPDCAEADIKK 193
Query: 107 IIAHAASRFIVIGDESK 123
+ ++ D+SK
Sbjct: 194 QAVDCSKVTFILMDKSK 210
>gi|288574166|ref|ZP_06392523.1| transcriptional regulator, DeoR family [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569907|gb|EFC91464.1| transcriptional regulator, DeoR family [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 251
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
KR+ A +A++Y+ D + +G G+T LL +
Sbjct: 81 KRSLAIKAMEYINDNDVVFLGAGTTCYFLAELLVTR 116
>gi|297190083|ref|ZP_06907481.1| DeoR-family transcriptional regulator [Streptomyces
pristinaespiralis ATCC 25486]
gi|197721206|gb|EDY65114.1| DeoR-family transcriptional regulator [Streptomyces
pristinaespiralis ATCC 25486]
Length = 266
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 36/151 (23%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMI----------------------------- 37
K+ A + + +G +G+ G+T E
Sbjct: 78 KQRIAAAVAKLIGEGDVVGLNGGTTTTEVARALALRAAGGGRRELSDVTAPSLTVVTNAL 137
Query: 38 ----LLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLR 93
LA + V + T + + +V +D+++ G D +D L
Sbjct: 138 NIAGELAVRPQIKIVVTGGVARPQTYELVG--PLTVGVLNEV-VLDVAVLGVDGVDPELG 194
Query: 94 LIKGYGGALLREKIIAHAASRFIVIGDESKR 124
L+ ++ A A R IV+ D SK
Sbjct: 195 LMTHQEDEASISRLFAERARRVIVVTDSSKM 225
>gi|225869949|ref|YP_002745896.1| lactose phosphotransferase system repressor [Streptococcus equi
subsp. equi 4047]
gi|225699353|emb|CAW92761.1| lactose phosphotransferase system repressor [Streptococcus equi
subsp. equi 4047]
Length = 260
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++ K+ AR A Q + DG T+ +G G+T + L ++
Sbjct: 76 QIEAKKEIARYASQLINDGETIFIGPGTTLECLAEALINR 115
>gi|317473275|ref|ZP_07932571.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
gi|316899269|gb|EFV21287.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
Length = 254
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 14/81 (17%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K+ AR A YV +G + + +GST LA + + ++VI +
Sbjct: 76 EEEKKAIARIARAYVKEGDAVILDSGSTTL----ELALLLKDVKNIKVITNDLQ------ 125
Query: 64 IHHIPLHSPEDVSSVDLSIDG 84
++ ++L I G
Sbjct: 126 ----IALELQENPWIELYIVG 142
>gi|114049497|ref|YP_740047.1| DeoR family transcriptional regulator [Shewanella sp. MR-7]
gi|113890939|gb|ABI44990.1| transcriptional regulator, DeoR family [Shewanella sp. MR-7]
Length = 256
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-----------ADKIANGFR------- 48
K + A+ A Q + D + + +G+T + L A +AN
Sbjct: 78 KLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNHKRGLVVMTNALHLANAIHELENEPT 137
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + + + + DG D + G + K
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLARGTTTFNELTGLS----K 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A + IV+ D K + LP
Sbjct: 194 VMAEVSREVIVMVDSDKIGKRIPNLELP 221
>gi|219871619|ref|YP_002475994.1| sugar metabolism within DeoR family transcriptional regulator
[Haemophilus parasuis SH0165]
gi|219691823|gb|ACL33046.1| sugar metabolism within DeoR family transcriptional regulator
[Haemophilus parasuis SH0165]
Length = 228
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 41/144 (28%), Gaps = 26/144 (18%)
Query: 2 DALQM---KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------ANGF 47
Q+ K A A + D + + +GST + L
Sbjct: 46 SQEQLSKQKLAIASAAANQIRDHNRIIIDSGSTTGTLVKALHHSGLVVMTNSLALANELI 105
Query: 48 RVQVIPS--------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYG 99
++ P+ +E+F + D + + DG D + G
Sbjct: 106 ALECEPTVLMTGGTWDARSESFQGKVAANVLRSYDFDQLFIGADGLDLTRGTTTFNELIG 165
Query: 100 GALLREKIIAHAASRFIVIGDESK 123
+ +A + IV+ + K
Sbjct: 166 LCQV----MAEVSREVIVMIESQK 185
>gi|317470548|ref|ZP_07929936.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
gi|316902063|gb|EFV23989.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
Length = 252
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 26/138 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AA +A + DG T+ + +G+T M+ LA + + + V+ + + +
Sbjct: 80 KQKAAAKARSMIKDGDTILLDSGTT----MLELAKLLKDAKNLTVVTNDLPSAMELQKME 135
Query: 67 IPLHSPEDVSSVDLSIDGF---------DEIDSRLRLIKGYGGALLRE------------ 105
V + + + I + G +L +
Sbjct: 136 GVYLILI-GGHVRTAFESTVGSMGMKFLENISVEKAFMSSDGVSLTKGATTPNMDQAEIK 194
Query: 106 KIIAHAASRFIVIGDESK 123
K + AA + ++ D SK
Sbjct: 195 KEMMAAADQNYLVCDTSK 212
>gi|90412257|ref|ZP_01220262.1| hypothetical GlpR, transcriptional regulators of sugar metabolism
[Photobacterium profundum 3TCK]
gi|90326748|gb|EAS43141.1| hypothetical GlpR, transcriptional regulators of sugar metabolism
[Photobacterium profundum 3TCK]
Length = 258
Score = 39.9 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 41/137 (29%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----------------NGFRV 49
K++ A+ A + DG + + +GST L K +
Sbjct: 79 KQSIAKAAADLINDGEAVILDSGSTIGLMPQYLTHKQQLVVMTNALNTAYQLSGVENIDL 138
Query: 50 QVI--PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
VI R + + H + L +DGFD A +
Sbjct: 139 HVIGGSLRRASCSLVGSHGEQQIRSYLFDKLFLGVDGFDLSAG--ITTPDSNEA-QINRA 195
Query: 108 IAHAASRFIVIGDESKR 124
+ A + I + D SK
Sbjct: 196 MCEVAHQVIAVTDSSKF 212
>gi|320180834|gb|EFW55757.1| Putative transcriptional regulator YgbI, DeoR family [Shigella
boydii ATCC 9905]
Length = 265
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 86 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|315653642|ref|ZP_07906562.1| lactose PTS family porter repressor [Lactobacillus iners ATCC
55195]
gi|315489004|gb|EFU78646.1| lactose PTS family porter repressor [Lactobacillus iners ATCC
55195]
Length = 248
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFR--VQVIPSSRN 57
+ K+ A+ A +V DG + + G+T E + L DK + NG + I
Sbjct: 80 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFLRDKKDLTVVTNGIDAAIACIELGIR 139
Query: 58 TENF---CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------REK 106
T+ K + + + S G G +K
Sbjct: 140 TKILGGTIKKKTHATIGTQTCQQLMQFNFNASFLGSNG---LGSNGCYTTPDCAEADIKK 196
Query: 107 IIAHAASRFIVIGDESK 123
+ ++ D+SK
Sbjct: 197 QAVDCSKVTFILMDKSK 213
>gi|167828255|ref|ZP_02459726.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 9]
Length = 212
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 30 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 89
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 90 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 149
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 150 VAASARCVVLATTDKL 165
>gi|317122824|ref|YP_004102827.1| DeoR family transcriptional regulator [Thermaerobacter marianensis
DSM 12885]
gi|315592804|gb|ADU52100.1| transcriptional regulator, DeoR family [Thermaerobacter marianensis
DSM 12885]
Length = 258
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 18/139 (12%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------AN 45
++ KR R A V G T+ + GST E L +I
Sbjct: 76 QVEAKRKIGRLAASLVRAGETVILDAGSTTLEIARHLPPRITLKVVTNDLLIARELADRE 135
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
G V + + + VD + G D +D+ L +
Sbjct: 136 GIDVYLTGGQVRQGVYSLQGPETEAYLR-ATHVDRAFLGADGVDAVYGLSTTNRQKAPVK 194
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + AA R V+ D SK
Sbjct: 195 QAMLAAAERTYVVADHSKL 213
>gi|206564313|ref|YP_002235076.1| DeoR family regulatory protein [Burkholderia cenocepacia J2315]
gi|198040353|emb|CAR56338.1| DeoR family regulatory protein [Burkholderia cenocepacia J2315]
Length = 252
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 75 DAKRTIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + +H VD + G I A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIHQLAQY-HVDFAFVGAGGITPDGECTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 194 MIAAAGTAIIVADHSKF 210
>gi|189459766|ref|ZP_03008551.1| hypothetical protein BACCOP_00395 [Bacteroides coprocola DSM 17136]
gi|189433548|gb|EDV02533.1| hypothetical protein BACCOP_00395 [Bacteroides coprocola DSM 17136]
Length = 252
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 52/138 (37%), Gaps = 22/138 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRV 49
+ KR A++AI ++ +G + + +GST E LL A + +
Sbjct: 77 EEKREIAKKAINFINEGDCIILDSGSTTTEIAKLLVSFKNLTIITNALNIALILGENPNI 136
Query: 50 QVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+I + T + + + + L+ G I ++++L L+ +
Sbjct: 137 SLIVTGGEFKAPTLSLTGEMAAQPFNNLHANKLFLATAG---ISAKMQLTYPSLSDLVVK 193
Query: 106 KIIAHAASRFIVIGDESK 123
+ ++ ++ D SK
Sbjct: 194 SAMIKSSDEVFLVADSSK 211
>gi|170765697|ref|ZP_02900508.1| transcriptional regulator, DeoR family [Escherichia albertii
TW07627]
gi|170124843|gb|EDS93774.1| transcriptional regulator, DeoR family [Escherichia albertii
TW07627]
Length = 255
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 15/148 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRVQV 51
A+ K + A+ V G + + G+T L IA+
Sbjct: 75 AMAQKAAIGKLAVSLVQPGSCIYLDAGTTTLAIAQHLIHMEPLTVVTNDFVIADYLLDNS 134
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLREKI 107
+ +T + + + + I + ++G + ++
Sbjct: 135 NCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDMAFISASSWSVRGISTPAEDKVTVKRA 194
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPI 135
IA A+ + +++ D +K LP+
Sbjct: 195 IASASRQRVLVCDATKYGQVATWLALPL 222
>gi|167630715|ref|YP_001681214.1| transcriptional regulator, deor family [Heliobacterium
modesticaldum Ice1]
gi|167593455|gb|ABZ85203.1| transcriptional regulator, deor family [Heliobacterium
modesticaldum Ice1]
Length = 253
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS--------- 55
+ KR A A+ + +G + + G+T +A ++ + VI +
Sbjct: 77 EAKRRIAAEALSLIREGQVILLDAGTTTL----EIARQLKGFSDLTVITNDLKIALELFD 132
Query: 56 -----------RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
R +N + P + VD++ ID +
Sbjct: 133 VDGVTLYCTGGRVQKNLGSLIGPPTLQFMESIRVDITFLAASSIDVVWGITTPVMEKAQI 192
Query: 105 EKIIAHAASRFIVIGDESKR 124
++ + A + +++ D SK
Sbjct: 193 KRRMMAVAEQVVLVADHSKF 212
>gi|107025450|ref|YP_622961.1| DeoR family transcriptional regulator [Burkholderia cenocepacia AU
1054]
gi|116693368|ref|YP_838901.1| DeoR family transcriptional regulator [Burkholderia cenocepacia
HI2424]
gi|170737353|ref|YP_001778613.1| DeoR family transcriptional regulator [Burkholderia cenocepacia
MC0-3]
gi|105894824|gb|ABF77988.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia AU
1054]
gi|116651368|gb|ABK12008.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia
HI2424]
gi|169819541|gb|ACA94123.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia
MC0-3]
Length = 252
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 75 DAKRTIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + +H VD + G I A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIHQLAQY-HVDFAFVGAGGITPDGECTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 194 MIAAAGTAIIVADHSKF 210
>gi|167957158|ref|ZP_02544232.1| Putative aga operon transcriptional repressor [candidate division
TM7 single-cell isolate TM7c]
gi|332878580|ref|ZP_08446300.1| transcriptional regulator, DeoR family [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332683481|gb|EGJ56358.1| transcriptional regulator, DeoR family [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 254
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 26/153 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI-PSSRNTENFCK 63
+ K +A+ Y+ + + + +GSTA LLA K+ + V+ PS R CK
Sbjct: 78 EEKTRIIDKALDYIKENEFIILSSGSTA----HLLAQKLYGLRNLTVLTPSLRVALEVCK 133
Query: 64 IHHIPLHSP---------EDVSSVDLSIDGFDEIDSRLRLIKGYG-----------GALL 103
++ V + + I+G A L
Sbjct: 134 NPNVNTIHLGGEVRKNSTSTVGVLAEETLSNFSCTTLFLGIEGIDLDYGLSSTNVGEAHL 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+K++ + IV+ D SK + +E
Sbjct: 194 NKKMMERV-DKTIVLADSSKIHKRGFGFICYVE 225
>gi|167851437|ref|ZP_02476945.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei B7210]
gi|167898306|ref|ZP_02485707.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 7894]
Length = 238
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 56 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 115
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 116 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 175
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 176 VAASARCVVLATTDKL 191
>gi|238894750|ref|YP_002919484.1| putative DeoR family regulatory protein [Klebsiella pneumoniae
NTUH-K2044]
gi|262044261|ref|ZP_06017327.1| DeoR family transcriptional regulator [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|238547066|dbj|BAH63417.1| putative DeoR-family bacterial regulatory protein [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259038320|gb|EEW39525.1| DeoR family transcriptional regulator [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 257
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
K +RA V DG + + TG+T +A I + V V+ +
Sbjct: 78 AKERIGQRAAALVEDGDIIVLDTGTTTLH----IARNIRDRQNVTVVTNDYQ 125
>gi|152970256|ref|YP_001335365.1| DeoR transcriptional regulator [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955105|gb|ABR77135.1| putative bacterial regulatory protein, DeoR [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 257
Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
K +RA V DG + + TG+T +A I + V V+ +
Sbjct: 78 AKERIGQRAAALVEDGDIIVLDTGTTTLH----IARNIRDRQNVTVVTNDYQ 125
>gi|222152910|ref|YP_002562087.1| DeoR family regulatory protein [Streptococcus uberis 0140J]
gi|222113723|emb|CAR41686.1| DeoR family regulatory protein [Streptococcus uberis 0140J]
Length = 237
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
Q K A++A Y+ D + + G+T + + + K
Sbjct: 67 QSKEKIAQKASDYIKDEDIIFIDAGTTTEFLIPKIGQK 104
>gi|113972248|ref|YP_736041.1| DeoR family transcriptional regulator [Shewanella sp. MR-4]
gi|113886932|gb|ABI40984.1| transcriptional regulator, DeoR family [Shewanella sp. MR-4]
Length = 260
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-----------ADKIANGFR------- 48
K + A+ A Q + D + + +G+T + L A +AN
Sbjct: 82 KLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNHKRGLVVMTNALHLANAIHELENEPT 141
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + + + + DG D + G + K
Sbjct: 142 LLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLARGTTTFNELTGLS----K 197
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A + IV+ D K + LP
Sbjct: 198 VMAEVSREVIVMVDSDKIGKRIPNLELP 225
>gi|74313301|ref|YP_311720.1| putative DeoR-type transcriptional regulator [Shigella sonnei
Ss046]
gi|82545192|ref|YP_409139.1| DEOR-type transcriptional regulator [Shigella boydii Sb227]
gi|218555279|ref|YP_002388192.1| putative DNA-binding transcriptional regulator [Escherichia coli
IAI1]
gi|218696329|ref|YP_002403996.1| putative DNA-binding transcriptional regulator [Escherichia coli
55989]
gi|260845378|ref|YP_003223156.1| putative DNA-binding transcriptional regulator [Escherichia coli
O103:H2 str. 12009]
gi|260856842|ref|YP_003230733.1| putative DNA-binding transcriptional regulator [Escherichia coli
O26:H11 str. 11368]
gi|260869410|ref|YP_003235812.1| putative DNA-binding transcriptional regulator [Escherichia coli
O111:H- str. 11128]
gi|300815859|ref|ZP_07096083.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|300820512|ref|ZP_07100663.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300922254|ref|ZP_07138380.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|301306150|ref|ZP_07212226.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|301326229|ref|ZP_07219612.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|309795196|ref|ZP_07689615.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|331678711|ref|ZP_08379385.1| regulatory protein, DeoR family [Escherichia coli H591]
gi|332280606|ref|ZP_08393019.1| DNA-binding transcriptional regulator [Shigella sp. D9]
gi|73856778|gb|AAZ89485.1| putative DEOR-type transcriptional regulator [Shigella sonnei
Ss046]
gi|81246603|gb|ABB67311.1| putative DEOR-type transcriptional regulator [Shigella boydii
Sb227]
gi|218353061|emb|CAU98886.1| putative DNA-binding transcriptional regulator [Escherichia coli
55989]
gi|218362047|emb|CAQ99654.1| putative DNA-binding transcriptional regulator [Escherichia coli
IAI1]
gi|257755491|dbj|BAI26993.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O26:H11 str. 11368]
gi|257760525|dbj|BAI32022.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O103:H2 str. 12009]
gi|257765766|dbj|BAI37261.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O111:H- str. 11128]
gi|300421384|gb|EFK04695.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300526776|gb|EFK47845.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300531788|gb|EFK52850.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|300838582|gb|EFK66342.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|300847074|gb|EFK74834.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|308121167|gb|EFO58429.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|315254519|gb|EFU34487.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 85-1]
gi|324017002|gb|EGB86221.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 117-3]
gi|331073541|gb|EGI44862.1| regulatory protein, DeoR family [Escherichia coli H591]
gi|332102958|gb|EGJ06304.1| DNA-binding transcriptional regulator [Shigella sp. D9]
Length = 265
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 86 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|313889682|ref|ZP_07823325.1| transcriptional regulator, DeoR family [Streptococcus
pseudoporcinus SPIN 20026]
gi|313121979|gb|EFR45075.1| transcriptional regulator, DeoR family [Streptococcus
pseudoporcinus SPIN 20026]
Length = 253
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++ K+ A+ A + V DG T+ +G G+T + F L K
Sbjct: 76 QIKEKKEIAKTASRLVKDGETIFIGPGTTLEFFAEQLVQK 115
>gi|229593478|ref|YP_002875597.1| glucitol operon repressor [Pseudomonas fluorescens SBW25]
gi|229365344|emb|CAY53721.1| glucitol operon repressor [Pseudomonas fluorescens SBW25]
Length = 255
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
KR AR A+ + + + + +GST + L + + N V S
Sbjct: 78 KRAIARAAVMRLREHARIIIDSGSTTAAMIPELGHQPGLVVMTNSLHVASALSELEHEPV 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++++F + D + + DG D R + L +
Sbjct: 138 LLMTGGTWDPHSDSFQGQVAEQVLRSYDFDQLFIGADGIDL----QRGTTTFNELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVMVESDKIGRKIPNLELP 221
>gi|134283751|ref|ZP_01770449.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
305]
gi|254264008|ref|ZP_04954873.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1710a]
gi|134244933|gb|EBA45029.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
305]
gi|254215010|gb|EET04395.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1710a]
Length = 274
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 92 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 151
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 152 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 211
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 212 VAASARCVVLATTDKL 227
>gi|323159961|gb|EFZ45931.1| hypothetical protein ECE128010_3876 [Escherichia coli E128010]
gi|323167251|gb|EFZ52968.1| hypothetical protein SS53G_2547 [Shigella sonnei 53G]
gi|323180157|gb|EFZ65709.1| hypothetical protein ECOK1180_0835 [Escherichia coli 1180]
gi|323183263|gb|EFZ68660.1| hypothetical protein ECOK1357_3038 [Escherichia coli 1357]
gi|332092021|gb|EGI97099.1| hypothetical protein SB359474_3239 [Shigella boydii 3594-74]
Length = 243
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 64 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 120
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 121 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 180
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 181 RAIASASRQRVLVCDATKYGQVATWLALPL 210
>gi|306841034|ref|ZP_07473758.1| DeoR family transcriptional regulator [Brucella sp. BO2]
gi|306288923|gb|EFM60223.1| DeoR family transcriptional regulator [Brucella sp. BO2]
Length = 274
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
KR AR A+ +G ++ + GST + + LA + IA Q +
Sbjct: 83 KRAIAREAVALCEEGDSIIINGGSTTFQMVHYLAPRRLQVLTNSFAIAEHLLRQSKSTVI 142
Query: 57 NTENFCKIHHIPLHSPEDVSSV-DLS----IDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ SP D + + G I L +++ + E+ +
Sbjct: 143 VPGGAIYRDQSLILSPFDNDVIRNFYGRRMFMGCQGISP-LGVMESDALIIQSEQKLMGQ 201
Query: 112 ASRFIVIGDESKR 124
A +++ D +K
Sbjct: 202 AEELVLMVDSTKF 214
>gi|290581006|ref|YP_003485398.1| putative DeoR-type transcriptional regulator [Streptococcus mutans
NN2025]
gi|254997905|dbj|BAH88506.1| putative DeoR-type transcriptional regulator [Streptococcus mutans
NN2025]
Length = 290
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 17/137 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A +A++ V D T+ + +GST + N +
Sbjct: 114 KKRIAAKAVELVRDNETIMVESGSTCALLAEAICQSRRNVKIITNSCFIATYIRKYDSCQ 173
Query: 67 I-----PLHSPEDVS------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ +V+ V+ G D D L + + +A
Sbjct: 174 VILLGGNYQPNSEVTVGPLLKEILKLFHVEKLFVGTDGFDDELGFMGKDMMRCEVVQYMA 233
Query: 110 HAASRFIVIGDESKRVD 126
+A +V+ D SK
Sbjct: 234 ESADELVVLTDSSKFAK 250
>gi|330006123|ref|ZP_08305522.1| transcriptional regulator, DeoR family [Klebsiella sp. MS 92-3]
gi|328535939|gb|EGF62361.1| transcriptional regulator, DeoR family [Klebsiella sp. MS 92-3]
Length = 257
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
K +RA V DG + + TG+T +A I + V V+ +
Sbjct: 78 AKERIGQRAAALVEDGDIIVLDTGTTTLH----IARNIRDRQNVTVVTNDYQ 125
>gi|53716670|ref|YP_105733.1| DeoR family transcriptional regulator [Burkholderia mallei ATCC
23344]
gi|126455573|ref|YP_001075680.1| DeoR family transcriptional regulator [Burkholderia pseudomallei
1106a]
gi|217419186|ref|ZP_03450693.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
576]
gi|226198085|ref|ZP_03793657.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
Pakistan 9]
gi|238562809|ref|ZP_00439844.2| transcriptional regulator, DeoR family [Burkholderia mallei GB8
horse 4]
gi|242312642|ref|ZP_04811659.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1106b]
gi|251767664|ref|ZP_04820202.1| transcriptional regulator, DeoR family [Burkholderia mallei PRL-20]
gi|254183578|ref|ZP_04890170.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1655]
gi|254356807|ref|ZP_04973082.1| transcriptional regulator, DeoR family [Burkholderia mallei
2002721280]
gi|262192861|ref|YP_001078414.2| DeoR family transcriptional regulator [Burkholderia mallei NCTC
10247]
gi|52422640|gb|AAU46210.1| transcriptional regulator, DeoR family [Burkholderia mallei ATCC
23344]
gi|126229341|gb|ABN92754.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1106a]
gi|148025834|gb|EDK83957.1| transcriptional regulator, DeoR family [Burkholderia mallei
2002721280]
gi|184214111|gb|EDU11154.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1655]
gi|217398490|gb|EEC38505.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
576]
gi|225929961|gb|EEH25976.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
Pakistan 9]
gi|238521908|gb|EEP85356.1| transcriptional regulator, DeoR family [Burkholderia mallei GB8
horse 4]
gi|242135881|gb|EES22284.1| transcriptional regulator, DeoR family [Burkholderia pseudomallei
1106b]
gi|243062014|gb|EES44200.1| transcriptional regulator, DeoR family [Burkholderia mallei PRL-20]
gi|261826704|gb|ABM99509.2| transcriptional regulator, DeoR family [Burkholderia mallei NCTC
10229]
gi|261835007|gb|ABO02868.2| transcriptional regulator, DeoR family [Burkholderia mallei NCTC
10247]
Length = 274
Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 92 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 151
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 152 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 211
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 212 VAASARCVVLATTDKL 227
>gi|113461065|ref|YP_719133.1| DeoR family transcriptional regulator [Haemophilus somnus 129PT]
gi|112823108|gb|ABI25197.1| transcriptional regulator, DeoR family [Haemophilus somnus 129PT]
Length = 251
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 15/137 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNT 58
+ K A A+ + G ++ + G+T +A I + ++ S
Sbjct: 74 QITEKERIAEYAVSLISPGDSIVLDAGTTTLCIAKKIAHMPLRVITTDLHIALLLSEYKQ 133
Query: 59 ENFCKIHHIPLHSPEDVSS------VDLSIDGFDEIDSRLRLIKGYGGALLREKII---- 108
+S + ++ + ++ A EK
Sbjct: 134 IELTITGGRVDNSSQSCIGNHSLTLLNNINPDIAFVSCNSWSLEKGVTAPTEEKAHLKRM 193
Query: 109 -AHAASRFIVIGDESKR 124
A + +++ D SK
Sbjct: 194 LQQNAKQKVLVADSSKY 210
>gi|259500523|ref|ZP_05743425.1| lactose PTS family porter repressor [Lactobacillus iners DSM 13335]
gi|259167907|gb|EEW52402.1| lactose PTS family porter repressor [Lactobacillus iners DSM 13335]
Length = 253
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFR--VQVIPSSRN 57
+ K+ A+ A +V DG + + G+T E + L DK + NG + I
Sbjct: 80 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFLRDKKDLTVVTNGIDAAIACIELGIR 139
Query: 58 TENF---CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------REK 106
T+ K + + + S G G +K
Sbjct: 140 TKILGGTIKKKTHATIGTQTCQQLMQFNFNASFLGSNG---LGSNGCYTTPDCAEADIKK 196
Query: 107 IIAHAASRFIVIGDESK 123
+ ++ D+SK
Sbjct: 197 QAVDCSKVTFILMDKSK 213
>gi|296158097|ref|ZP_06840930.1| transcriptional regulator, DeoR family [Burkholderia sp. Ch1-1]
gi|295891865|gb|EFG71650.1| transcriptional regulator, DeoR family [Burkholderia sp. Ch1-1]
Length = 251
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RA ++V DG +L + +GST + L D+
Sbjct: 76 AKRAIGERAAEFVPDGASLIIDSGSTTQAVARALLDRHR 114
>gi|295699267|ref|YP_003607160.1| DeoR family transcriptional regulator [Burkholderia sp. CCGE1002]
gi|295438480|gb|ADG17649.1| transcriptional regulator, DeoR family [Burkholderia sp. CCGE1002]
Length = 251
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RA ++V DG +L + +GST + L D+
Sbjct: 76 AKRAIGERAAEFVPDGASLIIDSGSTTQAVARALLDRHR 114
>gi|238059821|ref|ZP_04604530.1| DeoR family transcriptional regulator [Micromonospora sp. ATCC
39149]
gi|237881632|gb|EEP70460.1| DeoR family transcriptional regulator [Micromonospora sp. ATCC
39149]
Length = 251
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
K A A V GMT+ + G+TA L +
Sbjct: 77 KERVATAAAALVQPGMTIIVDGGTTALAVARALPASLR 114
>gi|167906668|ref|ZP_02493873.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei NCTC 13177]
Length = 238
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 56 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 115
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++
Sbjct: 116 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAA 175
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 176 VAASARCVVLATTDKL 191
>gi|187919492|ref|YP_001888523.1| DeoR family transcriptional regulator [Burkholderia phytofirmans
PsJN]
gi|187717930|gb|ACD19153.1| transcriptional regulator, DeoR family [Burkholderia phytofirmans
PsJN]
Length = 251
Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RA ++V DG +L + +GST + L D+
Sbjct: 76 AKRAIGERAAEFVPDGASLIIDSGSTTQAVARALLDRHR 114
>gi|323172976|gb|EFZ58607.1| hypothetical protein ECLT68_2377 [Escherichia coli LT-68]
Length = 255
Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 76 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|296390142|ref|ZP_06879617.1| putative transcriptional regulator [Pseudomonas aeruginosa PAb1]
gi|313106490|ref|ZP_07792720.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016]
gi|310879222|gb|EFQ37816.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016]
Length = 258
Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 15/150 (10%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS 54
M+ Q KR AR A G ++ + TG+T F LA + I N +
Sbjct: 72 MNEHAQEKRAVARYAAGLFGPGDSIFIDTGTTTLLFARELARQSHLTVITNSLLIAGSVG 131
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA--- 111
+ F S ++V ++ + + + I G + I A
Sbjct: 132 ASGNRAFMIGGEYRPESEQNVGALAIEQIARFNAEHAVITIGALNGDGAMDFSIEEAEIA 191
Query: 112 ------ASRFIVIGDESKRVDFLGRGMLPI 135
A + VI D SK + P+
Sbjct: 192 RAMIAQARQLTVIADSSKLGRRALFQVFPL 221
>gi|226315398|ref|YP_002775294.1| transcriptional regulator [Brevibacillus brevis NBRC 100599]
gi|226098348|dbj|BAH46790.1| putative transcriptional regulator [Brevibacillus brevis NBRC
100599]
Length = 259
Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGST--------------------AKEFMILLADKIA 44
+ K+ A +A+ ++ G T+ +G G+T M L +
Sbjct: 77 EEKQAIAHQALSHIQPGDTVILGAGTTMMELAKLLRGLNDLTVVTNAVNIAME-LNSQGK 135
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + + V G D I L
Sbjct: 136 HHVILIGGEMRHKSFALVGSVAADNLRGLSVFK---CFIGADGIHPENGLTTLNLAEAQI 192
Query: 105 EKIIAHAASRFIVIGDESKR 124
+++ A + V+ D SK
Sbjct: 193 NQVMMERARKVYVLADHSKF 212
>gi|257065895|ref|YP_003152151.1| transcriptional regulator, DeoR family [Anaerococcus prevotii DSM
20548]
gi|256797775|gb|ACV28430.1| transcriptional regulator, DeoR family [Anaerococcus prevotii DSM
20548]
Length = 229
Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 17/144 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
+ K++ R+A + + D + + GST + L K + G
Sbjct: 76 EEKKSIGRKASKLIPDKSLVFLDAGSTTNMMIDFLEAKEVRIVTNGLMHVTKLMERGIDT 135
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+I I ++ D + DL+ G + D AL++ K I
Sbjct: 136 IIIGGRLKARTRVTTGVIAMNELCDFN-FDLAFIGANGFDEEYFYTADINEALIKRKSIE 194
Query: 110 HAASRFIVIGDESKRVDFLGRGML 133
+++ ++ D SK + ++
Sbjct: 195 -LSNKAYILADSSKEHEVYHAKII 217
>gi|167819869|ref|ZP_02451549.1| transcriptional regulator, DeoR family protein [Burkholderia
pseudomallei 91]
Length = 193
Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTE 59
+ K AR A + G L + +GSTA + L + N + R
Sbjct: 11 ERKAALARTAASLIERGELLFLDSGSTALALVEYLPEDAELTIATNSIDIAAAVLRRADL 70
Query: 60 NFCKIHH---------IPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + + V+ +++ G + + L ++ +
Sbjct: 71 SLIMIGGAVDQAVGGCVDASAVQSVARMNIDRGFLGACALSPQRGLAAFGLADATFKRAV 130
Query: 109 AHAASRFIVIGDESKR 124
A++R +V+ K
Sbjct: 131 VAASARCVVLATTDKL 146
>gi|296534542|ref|ZP_06896960.1| DeoR family transcriptional regulator [Roseomonas cervicalis ATCC
49957]
gi|296265139|gb|EFH11346.1| DeoR family transcriptional regulator [Roseomonas cervicalis ATCC
49957]
Length = 272
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 25/155 (16%)
Query: 3 ALQ---MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
Q KR AA+ A + V +G TL + G+T + L +A V + T
Sbjct: 87 QDQHAAAKRQAAQHAARLVREGDTLFIDCGTTTPHLVQALPPGLA--LTVVCYALNIATL 144
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL----------------- 102
+ + L + + DE + LR ++ L
Sbjct: 145 -LARRPNTRLVLLGGLYHPGATTFSSDESLASLRRLRLNTAFLSAAGVDAAQGATCVHFN 203
Query: 103 -LREKIIAHA-ASRFIVIGDESKRVDFLGRGMLPI 135
+ K +A A A++ +++ D SK P+
Sbjct: 204 EVPVKQMALAGAAQRVLVVDGSKLGQLRPAYFAPL 238
>gi|332999480|gb|EGK19065.1| hypothetical protein SFVA6_3624 [Shigella flexneri VA-6]
Length = 255
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 76 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|332087466|gb|EGI92594.1| hypothetical protein SB521682_3208 [Shigella boydii 5216-82]
Length = 255
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 76 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|323463794|gb|ADX75947.1| lactose phosphotransferase system repressor [Staphylococcus
pseudintermedius ED99]
Length = 250
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 14/136 (10%), Positives = 40/136 (29%), Gaps = 18/136 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL-----------------LADKIANGF 47
+ K A++A + + DG + +G G+T + + + +
Sbjct: 78 EEKLEIAKKAAKLIEDGNVIFLGPGTTVEMLAKEIDNQRLSIVTNCLPVFQILEHKRSEQ 137
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ + ++ + + I + Y A + +
Sbjct: 138 FSVYLIGGSKRQLTESFVGEMANTLLEKMRFSKIFFSANGIKGNDVMTSSYEEAYT-QNL 196
Query: 108 IAHAASRFIVIGDESK 123
++ ++ D+SK
Sbjct: 197 AIKHSNEKYILADDSK 212
>gi|157158995|ref|YP_001464054.1| DeoR family transcriptional regulator [Escherichia coli E24377A]
gi|187730642|ref|YP_001881520.1| DeoR family transcriptional regulator [Shigella boydii CDC 3083-94]
gi|191166765|ref|ZP_03028591.1| transcriptional regulator, DeoR family [Escherichia coli B7A]
gi|193065001|ref|ZP_03046076.1| transcriptional regulator, DeoR family [Escherichia coli E22]
gi|193069648|ref|ZP_03050600.1| transcriptional regulator, DeoR family [Escherichia coli E110019]
gi|194427825|ref|ZP_03060371.1| transcriptional regulator, DeoR family [Escherichia coli B171]
gi|209920174|ref|YP_002294258.1| putative transcriptional regulator [Escherichia coli SE11]
gi|256019484|ref|ZP_05433349.1| putative DNA-binding transcriptional regulator [Shigella sp. D9]
gi|293449052|ref|ZP_06663473.1| HTH-type transcriptional regulator ygbI [Escherichia coli B088]
gi|307312841|ref|ZP_07592471.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|331669470|ref|ZP_08370316.1| regulatory protein, DeoR family [Escherichia coli TA271]
gi|157081025|gb|ABV20733.1| transcriptional regulator, DeoR family [Escherichia coli E24377A]
gi|187427634|gb|ACD06908.1| transcriptional regulator, DeoR family [Shigella boydii CDC
3083-94]
gi|190903136|gb|EDV62859.1| transcriptional regulator, DeoR family [Escherichia coli B7A]
gi|192927298|gb|EDV81917.1| transcriptional regulator, DeoR family [Escherichia coli E22]
gi|192957011|gb|EDV87462.1| transcriptional regulator, DeoR family [Escherichia coli E110019]
gi|194414058|gb|EDX30334.1| transcriptional regulator, DeoR family [Escherichia coli B171]
gi|209913433|dbj|BAG78507.1| putative transcriptional regulator [Escherichia coli SE11]
gi|291322142|gb|EFE61571.1| HTH-type transcriptional regulator ygbI [Escherichia coli B088]
gi|306907276|gb|EFN37782.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|315062012|gb|ADT76339.1| predicted DNA-binding transcriptional regulator [Escherichia coli
W]
gi|320173416|gb|EFW48615.1| putative transcriptional regulator YgbI, DeoR family [Shigella
dysenteriae CDC 74-1112]
gi|320186519|gb|EFW61247.1| Putative transcriptional regulator YgbI, DeoR family [Shigella
flexneri CDC 796-83]
gi|320202382|gb|EFW76952.1| Putative transcriptional regulator YgbI, DeoR family [Escherichia
coli EC4100B]
gi|323154952|gb|EFZ41144.1| hypothetical protein ECEPECA14_3195 [Escherichia coli EPECa14]
gi|323377405|gb|ADX49673.1| transcriptional regulator, DeoR family [Escherichia coli KO11]
gi|323946383|gb|EGB42411.1| deoR family protein Bacterial regulatory protein [Escherichia coli
H120]
gi|324119985|gb|EGC13863.1| deoR family protein regulatory protein [Escherichia coli E1167]
gi|331063138|gb|EGI35051.1| regulatory protein, DeoR family [Escherichia coli TA271]
Length = 255
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 76 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|152978426|ref|YP_001344055.1| DeoR family transcriptional regulator [Actinobacillus succinogenes
130Z]
gi|150840149|gb|ABR74120.1| transcriptional regulator, DeoR family [Actinobacillus succinogenes
130Z]
Length = 261
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 41/138 (29%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--ADKIANGFRVQVIPSSRNTENFCKI 64
K + A+ A + + D + + +GST + L + + S +
Sbjct: 86 KLSIAKAAAERIKDHHRIIVDSGSTTAALIKQLNSKQGLVVMTNSLSVASELRSLENEPT 145
Query: 65 HHIPLHSPE------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + + D + + DG D + G + +
Sbjct: 146 LLMTGGTWDTRSESFQGKVAEQVLRSYDFDQLFIGADGIDMERGTTTFNELVGLSQV--- 202
Query: 107 IIAHAASRFIVIGDESKR 124
+A + IV+ + K
Sbjct: 203 -MAEVSREVIVMAESQKF 219
>gi|27367417|ref|NP_762944.1| transcriptional repressor of aga operon [Vibrio vulnificus CMCP6]
gi|37677180|ref|NP_937576.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
YJ016]
gi|320159266|ref|YP_004191644.1| transcriptional repressor of aga operon [Vibrio vulnificus
MO6-24/O]
gi|27358986|gb|AAO07934.1| Transcriptional repressor of aga operon [Vibrio vulnificus CMCP6]
gi|37201725|dbj|BAC97546.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
YJ016]
gi|319934578|gb|ADV89441.1| transcriptional repressor of aga operon [Vibrio vulnificus
MO6-24/O]
Length = 256
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGST----AKEFMIL-----------LADKIANG 46
+ +K + A V DG TL + +GST A +A +AN
Sbjct: 75 NQD-IKSLLGQYAASLVEDGDTLILDSGSTTEQIAFHLTEKQHLKVMTNAINIAYHLANR 133
Query: 47 FRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++VI + +N+ + L + + L +DGFD++ G
Sbjct: 134 DNIEVIVTGGLMRKNSYSLHGESGEALLGQFRFNKLFLGVDGFDKLAGVTTPHSGEASI- 192
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + AA I + D SK
Sbjct: 193 --NRRMVEAAQMVIAVTDSSKF 212
>gi|312875603|ref|ZP_07735604.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
2053A-b]
gi|311088857|gb|EFQ47300.1| transcriptional regulator, DeoR family [Lactobacillus iners LEAF
2053A-b]
Length = 250
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 21/137 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFR--VQVIPSSRN 57
+ K+ A+ A +V DG + + G+T E + L DK + NG + I
Sbjct: 77 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFLRDKKDLTVVTNGIDAAIACIELGIR 136
Query: 58 TENF---CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------REK 106
T+ K + + + S I G +K
Sbjct: 137 TKILGGTIKKKTHATIGTQTCHQLMQFNFNASFLGSNGLGING---CYTTPDCAEADIKK 193
Query: 107 IIAHAASRFIVIGDESK 123
+ ++ D+SK
Sbjct: 194 QAVDCSKVTFILMDKSK 210
>gi|172064174|ref|YP_001811825.1| DeoR family transcriptional regulator [Burkholderia ambifaria
MC40-6]
gi|171996691|gb|ACB67609.1| transcriptional regulator, DeoR family [Burkholderia ambifaria
MC40-6]
Length = 252
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
+ KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 75 EAKRTIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGDCTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 194 MIAAAGTAIIVADHSKF 210
>gi|262282323|ref|ZP_06060091.1| phosphotransferase system repressor [Streptococcus sp. 2_1_36FAA]
gi|262261614|gb|EEY80312.1| phosphotransferase system repressor [Streptococcus sp. 2_1_36FAA]
Length = 247
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 15/134 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI----------ANGFRVQVIPS 54
Q K+ A +A + D + + G+T + + + + A+ + IP+
Sbjct: 77 QFKQKIAEKAASLIQDHDVVFIDAGTTNELLIQAIHNHKVTIVTNSIHHASKLVERNIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
T I + + ++ + G + ID ++ I
Sbjct: 137 VIVGGTVKRSTDASIGGIALNQIGQLNFDKAFIGMNGIDDSFYTTPDMEEG-AVKRAIME 195
Query: 111 AASRFIVIGDESKR 124
A + V+ D SK
Sbjct: 196 NAKQTYVLSDPSKL 209
>gi|170717642|ref|YP_001784720.1| DeoR family transcriptional regulator [Haemophilus somnus 2336]
gi|168825771|gb|ACA31142.1| transcriptional regulator, DeoR family [Haemophilus somnus 2336]
Length = 251
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 15/137 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNT 58
+ K A A+ + G ++ + G+T +A I + ++ S
Sbjct: 74 QITEKERIAEYAVSLISPGDSIVLDAGTTTLCIAKKIAHMPLRVITTDLHIALLLSEYKQ 133
Query: 59 ENFCKIHHIPLHSPEDVSS------VDLSIDGFDEIDSRLRLIKGYGGALLREKII---- 108
+S + ++ + ++ A EK
Sbjct: 134 IELTITGGRVDNSSQSCIGNHSLILLNNINPDIAFVSCNSWSLEKGVTAPTEEKAHLKRM 193
Query: 109 -AHAASRFIVIGDESKR 124
A + +++ D SK
Sbjct: 194 LQQNAKQKVLVADSSKY 210
>gi|309778261|ref|ZP_07673191.1| lactose phosphotransferase system repressor [Erysipelotrichaceae
bacterium 3_1_53]
gi|308913988|gb|EFP59798.1| lactose phosphotransferase system repressor [Erysipelotrichaceae
bacterium 3_1_53]
Length = 251
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 39/134 (29%), Gaps = 14/134 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQ--VIPSSRNT 58
+ K+ AR A + + + GST + L ++ + NG + T
Sbjct: 81 EEKKRIARYAASLIQAHDFVYIDAGSTTLHMVEYLKEEEAIYVTNGLEHGRRLAAQGFRT 140
Query: 59 ENFC---KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY----GGALLREKIIAHA 111
K + VSS+ + + K+ A
Sbjct: 141 FLLAGELKSRTEAVVGLGAVSSLQKYNFNKAFFGTNGITVDSGFTTPDTNEAYVKMEAMK 200
Query: 112 -ASRFIVIGDESKR 124
A + ++ D SK
Sbjct: 201 HAQKCYILADSSKF 214
>gi|312973054|ref|ZP_07787227.1| uncharacterized HTH-type transcriptional regulator ygbI
[Escherichia coli 1827-70]
gi|310332996|gb|EFQ00210.1| uncharacterized HTH-type transcriptional regulator ygbI
[Escherichia coli 1827-70]
Length = 243
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 64 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLD 120
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 121 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 180
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 181 RAIASASRQRVLVCDATKYGQVATWLALPL 210
>gi|311897777|dbj|BAJ30185.1| putative DeoR family transcriptional regulator [Kitasatospora setae
KM-6054]
Length = 262
Score = 39.9 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 26/146 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL------LADKIANGFRVQVIPSSRN- 57
K+ V G +G+ G+T E LA++ +G + V+ ++ N
Sbjct: 76 DAKQRIGALVAGLVAPGEVVGLNGGTTTTEVARALAVRTDLAERPESGHGLTVVTNALNI 135
Query: 58 TENFCKIHHIPLHSPEDVSS-------------------VDLSIDGFDEIDSRLRLIKGY 98
+ + V+ +D ++ G D D+ +
Sbjct: 136 ANELAVRPQVKIVVTGGVARPQSYELIGPLAAQVLGELALDTAVLGVDGFDAGHGATAHH 195
Query: 99 GGALLREKIIAHAASRFIVIGDESKR 124
G +++A A R +V D SK
Sbjct: 196 EGEAAVNRLLAERARRVVVAADSSKL 221
>gi|254162666|ref|YP_003045774.1| putative DNA-binding transcriptional regulator [Escherichia coli B
str. REL606]
gi|300930594|ref|ZP_07145986.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300941114|ref|ZP_07155626.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|301027147|ref|ZP_07190516.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|242378291|emb|CAQ33067.1| predicted DNA-binding transcriptional regulator, DEOR-type
[Escherichia coli BL21(DE3)]
gi|253974567|gb|ACT40238.1| predicted DNA-binding transcriptional regulator [Escherichia coli B
str. REL606]
gi|253978734|gb|ACT44404.1| predicted DNA-binding transcriptional regulator [Escherichia coli
BL21(DE3)]
gi|299889224|dbj|BAJ10321.1| DeoR-type transcriptional regulator [Escherichia coli BL21(DE3)]
gi|300395179|gb|EFJ78717.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|300454157|gb|EFK17650.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|300461536|gb|EFK25029.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
Length = 265
Score = 39.9 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 86 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|115359381|ref|YP_776519.1| DeoR family transcriptional regulator [Burkholderia ambifaria AMMD]
gi|115284669|gb|ABI90185.1| transcriptional regulator, DeoR family [Burkholderia ambifaria
AMMD]
Length = 266
Score = 39.9 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
+ KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 89 EAKRTIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 148
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 149 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGDCTDYSRLAAEVRSR 207
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 208 MIAAAGTAIIVADHSKF 224
>gi|300906760|ref|ZP_07124442.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300401454|gb|EFJ84992.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
Length = 265
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IAN
Sbjct: 86 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRGNRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|260774123|ref|ZP_05883038.1| transcriptional repressor of aga operon [Vibrio metschnikovii CIP
69.14]
gi|260611084|gb|EEX36288.1| transcriptional repressor of aga operon [Vibrio metschnikovii CIP
69.14]
Length = 258
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+K+ A A+ + G TL + +G+T L
Sbjct: 81 LKQKIAAAAVTLIEKGDTLILDSGTTTYYIAEAL 114
>gi|188589518|ref|YP_001922398.1| transcriptional regulator, DeoR family [Clostridium botulinum E3
str. Alaska E43]
gi|251778488|ref|ZP_04821408.1| transcriptional regulator, DeoR family [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|188499799|gb|ACD52935.1| transcriptional regulator, DeoR family [Clostridium botulinum E3
str. Alaska E43]
gi|243082803|gb|EES48693.1| transcriptional regulator, DeoR family [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 263
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K A+ A + DG T+ + + STA + L +K
Sbjct: 84 NKKKNIIAKYAADLIKDGDTVFINSSSTALLMLKYLGNK 122
>gi|117619355|ref|YP_857238.1| ribose-5-phosphate isomerase A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560762|gb|ABK37710.1| ribose-5-phosphate isomerase A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 50
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 196 GELCNI-PGVIEHGLFINM-VDCAIIGTSDGECL 227
+L I G + HGLF + D +IGT +G +
Sbjct: 16 TQLNGIMVGTVTHGLFAHRGADVVLIGTLEGVVI 49
>gi|332716287|ref|YP_004443753.1| deoR family transcriptional regulator [Agrobacterium sp. H13-3]
gi|325062972|gb|ADY66662.1| transcriptional regulator, deoR family [Agrobacterium sp. H13-3]
Length = 276
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 14/146 (9%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
KR AR+A+ DG + + G+T + + +A + + ++
Sbjct: 81 DKKRAIARKAVDLCNDGDAIILNGGTTTFQMVHYMAARRLQVMTNSFAIAEHLVKHSKCN 140
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEID--------------SRLRLIKGYGGALLREKIIAH 110
+P + S+ LS D I L +++ + E+ +
Sbjct: 141 VSVPGGAIYRDQSLILSPFENDAIRNFYARRIFLGAQGIGALGIMESDALVIQSEQKLMR 200
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
A IV+ D SK + P+E
Sbjct: 201 QAEELIVMVDSSKFKKRSSLILCPLE 226
>gi|239977960|ref|ZP_04700484.1| regulatory protein, DeoR [Streptomyces albus J1074]
gi|291449871|ref|ZP_06589261.1| transcriptional regulator [Streptomyces albus J1074]
gi|291352820|gb|EFE79722.1| transcriptional regulator [Streptomyces albus J1074]
Length = 264
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 18/171 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A RA V DGMTL + G+T + L + R+ V+ + +T +
Sbjct: 86 KEAMASRAASLVEDGMTLYLDAGTTLLAAVPHL----VHHERLTVVSNDFSTVDRL---- 137
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+ +++ I ++++ R G A + A FI
Sbjct: 138 -----MTEAPHLEI-IHVGGQVEAANRSTVGRLAAATLRHLALDMA--FISTSSWDLLRG 189
Query: 127 FLGRGMLPIEIDQFGVNKTLSAL-KEVASCFGLNEELRLRRNGS-GLFVSD 175
+E+ + ++ + SA+ +S FG + R+ ++D
Sbjct: 190 VTTPSDAKVEVKRAALDSSRSAVLVAGSSKFGTFGKYRVAPLADFDAIITD 240
>gi|221200217|ref|ZP_03573259.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD2M]
gi|221205898|ref|ZP_03578912.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD2]
gi|221173910|gb|EEE06343.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD2]
gi|221179558|gb|EEE11963.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD2M]
Length = 252
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
KR RRA ++V DG ++ + +GST + LAD+ NG
Sbjct: 75 DAKRTIGRRAAEFVPDGASVLIDSGSTPHAVALALADRHRLSVYTNDWRTALVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGDCTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 194 MIAAAGTAIIVADHSKF 210
>gi|221215676|ref|ZP_03588638.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD1]
gi|221164505|gb|EED96989.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD1]
Length = 252
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
KR RRA ++V DG ++ + +GST + LAD+ NG
Sbjct: 75 DAKRTIGRRAAEFVPDGASVLIDSGSTPHAVALALADRHRLSVYTNDWRTALVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGDCTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 194 MIAAAGTAIIVADHSKF 210
>gi|187933554|ref|YP_001887454.1| transcriptional regulator, DeoR family [Clostridium botulinum B
str. Eklund 17B]
gi|187721707|gb|ACD22928.1| transcriptional regulator, DeoR family [Clostridium botulinum B
str. Eklund 17B]
Length = 263
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K A+ A + DG T+ + + STA + L +K
Sbjct: 84 NKKKNIIAKYAADLIKDGDTVFINSSSTALLMLKYLGNK 122
>gi|297623469|ref|YP_003704903.1| DeoR family transcriptional regulator [Truepera radiovictrix DSM
17093]
gi|297164649|gb|ADI14360.1| transcriptional regulator, DeoR family [Truepera radiovictrix DSM
17093]
Length = 266
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 17/147 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK------IANGFRVQVIPSSRNTEN 60
K+ A A+ + DG TL + GST LL + I N + SS
Sbjct: 85 KQRIAEAALALIHDGDTLILDAGSTTLALARLLPGRRRGLTIITNALPILAELSSAEGFE 144
Query: 61 FC------KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY----GGALLREK-IIA 109
+ H + + P+ V+++ + + ++G K +
Sbjct: 145 LISLGGLVRSHSLAMIGPQTVANLRALHADRAFLGATGVTLRGGLSTPNLIEAETKAAMV 204
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
AA + D SK P E
Sbjct: 205 AAAESCAALVDHSKVGSSSLAPFAPWE 231
>gi|315615124|gb|EFU95761.1| uncharacterized HTH-type transcriptional regulator ygbI
[Escherichia coli 3431]
Length = 243
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 64 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLD 120
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 121 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 180
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 181 RAIASASRQRVLVCDATKYGQVATWLALPL 210
>gi|89109522|ref|AP_003302.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. W3110]
gi|170082311|ref|YP_001731631.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
substr. DH10B]
gi|238901872|ref|YP_002927668.1| putative DNA-binding transcriptional regulator [Escherichia coli
BW2952]
gi|254037776|ref|ZP_04871834.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|300919228|ref|ZP_07135751.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300946986|ref|ZP_07161212.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|300954978|ref|ZP_07167389.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|301645282|ref|ZP_07245233.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|331643421|ref|ZP_08344552.1| regulatory protein, DeoR family [Escherichia coli H736]
gi|882628|gb|AAA69245.1| ORF_f265 [Escherichia coli str. K-12 substr. MG1655]
gi|85675556|dbj|BAE76812.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K12 substr. W3110]
gi|169890146|gb|ACB03853.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. DH10B]
gi|226839400|gb|EEH71421.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|238862283|gb|ACR64281.1| predicted DNA-binding transcriptional regulator [Escherichia coli
BW2952]
gi|300318070|gb|EFJ67854.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|300413673|gb|EFJ96983.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300453373|gb|EFK16993.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|301076447|gb|EFK91253.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|309703094|emb|CBJ02426.1| predicted DNA-binding transcriptional regulator [Escherichia coli
ETEC H10407]
gi|331036892|gb|EGI09116.1| regulatory protein, DeoR family [Escherichia coli H736]
Length = 265
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 86 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|168486272|ref|ZP_02710780.1| regulator of fucose operon [Streptococcus pneumoniae CDC1087-00]
gi|183570637|gb|EDT91165.1| regulator of fucose operon [Streptococcus pneumoniae CDC1087-00]
Length = 257
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 56/166 (33%), Gaps = 32/166 (19%)
Query: 1 MDALQM------------KRNAARRAIQYVVDGMTLGMGTGSTAK--------------- 33
M+ +++ KR A A ++ M + + + +T
Sbjct: 61 MNTIELSHQIREGESTRQKRLIASLAKDFIRSSMCVYLDSSTTVYELCPYLSELDNLIIF 120
Query: 34 ----EFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
L++ + + ++ + ++ +++ +S D ++DL+ ID
Sbjct: 121 TNGLHTAQTLSETVKDSSKIFITSGEVKHQSCSVVNYDKENSLLDHFNIDLAFCSARGID 180
Query: 90 SRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ A+ +K I A I++ D SK + P+
Sbjct: 181 DQYVYEASLSQAI-SKKNIIDKAHETILLIDSSKFYKTGFFKINPL 225
>gi|163740796|ref|ZP_02148189.1| transcriptional regulator [Phaeobacter gallaeciensis 2.10]
gi|161385787|gb|EDQ10163.1| transcriptional regulator [Phaeobacter gallaeciensis 2.10]
Length = 263
Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M K A Q++ DG + + TGST+ L + N V T
Sbjct: 69 MSQNRAAKVAIANAVAQWIPDGSAIAIDTGSTSGFVAQAL-RRRKNLTVVTNSAFIAATL 127
Query: 60 NFCKIHHIPLHSPE 73
+ + + + + +
Sbjct: 128 SMEEGNRVFMAGTQ 141
>gi|332522396|ref|ZP_08398648.1| transcriptional regulator, DeoR family [Streptococcus porcinus str.
Jelinkova 176]
gi|332313660|gb|EGJ26645.1| transcriptional regulator, DeoR family [Streptococcus porcinus str.
Jelinkova 176]
Length = 266
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A A V DG T+ +G G+T + F L K
Sbjct: 89 QTKEKKEIANTASNLVKDGETIFIGPGTTLEFFAERLVQK 128
>gi|218284077|ref|ZP_03489905.1| hypothetical protein EUBIFOR_02509 [Eubacterium biforme DSM 3989]
gi|218215399|gb|EEC88937.1| hypothetical protein EUBIFOR_02509 [Eubacterium biforme DSM 3989]
Length = 253
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 16/138 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANGF 47
+ + K+ A++A+ +V T+ + +GST +L A ++A
Sbjct: 78 NVNE-KKEIAQKALSFVEPAKTIFVDSGSTTTMLAHVLNNQNNIFYTSGLTCAIEMAKLS 136
Query: 48 RVQVIPSSRNTENFCKI-HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ +V + N + + + + D++ G ++
Sbjct: 137 KSKVFVTGGNLNMQSFSVNGMDGLRCLEKVNFDVAFIGVTRYAKDTGFTCESLEDCELKR 196
Query: 107 IIAHAASRFIVIGDESKR 124
+ + IV+ D SK
Sbjct: 197 KAIERSKKVIVLMDSSKV 214
>gi|167856230|ref|ZP_02478965.1| transcriptional repressor AgaR [Haemophilus parasuis 29755]
gi|219870464|ref|YP_002474839.1| transcriptional repressor AgaR/DNA-binding transcriptional dual
regulator [Haemophilus parasuis SH0165]
gi|167852650|gb|EDS23929.1| transcriptional repressor AgaR [Haemophilus parasuis 29755]
gi|219690668|gb|ACL31891.1| transcriptional repressor AgaR/DNA-binding transcriptional dual
regulator [Haemophilus parasuis SH0165]
Length = 253
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQV--IPSS--- 55
++K+ A + +G + + +G+T K + + D + NG V + +
Sbjct: 78 ELKQQIGHLAASLLKEGEKVILDSGTTTKAIVSAIGDLNLTVLTNGLDVAMALVSCPNVE 137
Query: 56 -RNTENFCKIHHIPLHSPEDVSSVDLS-----IDGFDEIDSRLRLIKGYGGALLREKIIA 109
R T + + + +++ G D D + + +++
Sbjct: 138 VRMTGGVLRKNAMSFSGVMADNNLQHYRFDKVFLGVDGFDLQKGVTTFNEQEAQLNRLMC 197
Query: 110 HAASRFIVIGDESKR 124
AA + IV+ D SK
Sbjct: 198 DAADQVIVVTDSSKF 212
>gi|157162183|ref|YP_001459501.1| DeoR family transcriptional regulator [Escherichia coli HS]
gi|170019019|ref|YP_001723973.1| DeoR family transcriptional regulator [Escherichia coli ATCC 8739]
gi|194438935|ref|ZP_03071019.1| transcriptional regulator, DeoR family [Escherichia coli 101-1]
gi|253772409|ref|YP_003035240.1| DeoR family transcriptional regulator [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|297519150|ref|ZP_06937536.1| predicted DNA-binding transcriptional regulator [Escherichia coli
OP50]
gi|157067863|gb|ABV07118.1| transcriptional regulator, DeoR family [Escherichia coli HS]
gi|169753947|gb|ACA76646.1| transcriptional regulator, DeoR family [Escherichia coli ATCC 8739]
gi|194422056|gb|EDX38059.1| transcriptional regulator, DeoR family [Escherichia coli 101-1]
gi|253323453|gb|ACT28055.1| transcriptional regulator, DeoR family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|323941434|gb|EGB37617.1| deoR family protein regulatory protein [Escherichia coli E482]
gi|323960605|gb|EGB56231.1| deoR family protein regulatory protein [Escherichia coli H489]
gi|323966883|gb|EGB62312.1| deoR family protein regulatory protein [Escherichia coli M863]
gi|323971536|gb|EGB66769.1| deoR family protein regulatory protein [Escherichia coli TA007]
gi|327251459|gb|EGE63145.1| hypothetical protein ECSTEC7V_3307 [Escherichia coli STEC_7v]
gi|332344617|gb|AEE57951.1| transcriptional regulator protein YgbI [Escherichia coli UMNK88]
Length = 255
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 76 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|257465843|ref|ZP_05630154.1| DeoR family transcriptional regulator [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917000|ref|ZP_07913240.1| transcriptional regulator [Fusobacterium gonidiaformans ATCC 25563]
gi|313690875|gb|EFS27710.1| transcriptional regulator [Fusobacterium gonidiaformans ATCC 25563]
Length = 261
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 18/136 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------SR 56
K+ A +A++ + MT+ + G+T E L+A RV +
Sbjct: 79 KKRIAEKALEEIRSNMTIILDAGTTTYELACLIAQSSIQNLRVITNDLYIALELYQKENI 138
Query: 57 NTENFCKIHHIPLHSPEDVSSV--------DLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ V S+ D++ G I L + ++ ++ I
Sbjct: 139 KLILLGGEVARETGATTSVLSIKQIENYNADIAFLGISSISDNLDITVPTEVKVILKRSI 198
Query: 109 AHAASRFIVIGDESKR 124
+ + I++ D SK
Sbjct: 199 MKISEKNILLTDYSKF 214
>gi|225378708|ref|ZP_03755929.1| hypothetical protein ROSEINA2194_04378 [Roseburia inulinivorans DSM
16841]
gi|225209545|gb|EEG91899.1| hypothetical protein ROSEINA2194_04378 [Roseburia inulinivorans DSM
16841]
Length = 249
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 45/148 (30%), Gaps = 18/148 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K A+ A + + G + + G+T + + + + A F I ++
Sbjct: 79 DAKNKIAKYAAEQIASGDFVYLDAGTTTELMIEYITSRQAV-FVTNAISHAKRLAERGFT 137
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL----------------LREKII 108
++ + V+ + + ++ KG+ G + +K
Sbjct: 138 VYLLGGEFKAVTEAIVGEEAVTTLEK-YNFTKGFWGTNGVSLQKGYSTPELKEAMVKKKS 196
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIE 136
V+ DESK P E
Sbjct: 197 MENCKERFVLADESKFNQISSVTFAPFE 224
>gi|259046697|ref|ZP_05737098.1| DeoR family transcriptional regulator [Granulicatella adiacens ATCC
49175]
gi|259036593|gb|EEW37848.1| DeoR family transcriptional regulator [Granulicatella adiacens ATCC
49175]
Length = 255
Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 64/203 (31%), Gaps = 34/203 (16%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
MK+N ARRA V D + + +GSTA + LAD V ++ ++ +
Sbjct: 79 NSMKKNIARRAAGLVRDHNMVFINSGSTAFLLLNFLAD-----ANVTILTNNGRSIFKKP 133
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ EI + + + G K A F+ +G SK
Sbjct: 134 STKASIVI------------SGGEIFEQKKSLVGDFAINSFSKARADIC--FLGVGGISK 179
Query: 124 RVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR--RNGSGLFVSDGGNYIV 181
I + + +T + G + F + N I
Sbjct: 180 NG-----------ISTYALPETAVNRVILERTTGHRIIVTEGFKVGRDSNFHTADCNMIT 228
Query: 182 DAFFGFIPDPQIISGELCNIPGV 204
DP+ ++ L +I GV
Sbjct: 229 HLITDHTADPETVA-YLKSI-GV 249
>gi|309776793|ref|ZP_07671767.1| transcriptional regulator, DeoR family [Erysipelotrichaceae
bacterium 3_1_53]
gi|308915541|gb|EFP61307.1| transcriptional regulator, DeoR family [Erysipelotrichaceae
bacterium 3_1_53]
Length = 267
Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
Q K A+ A QYV DG T+ + T STA + + +K
Sbjct: 78 EQYKHAIAKYAAQYVKDGDTIFINTSSTALLVLKYIKNK 116
>gi|303304910|dbj|BAJ14778.1| lactose phosphotransferase system repressor [Staphylococcus lentus]
Length = 251
Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 41/136 (30%), Gaps = 18/136 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------IANGFR 48
+ K+ A++A + +G T+ +G G+T + + +K
Sbjct: 78 EEKKQIAKKAATLIEEGNTVFLGPGTTVELLAEEIHNKNLSVITNCLPVFNILFKKKNEY 137
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPE-DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+V + + + + + + + + A +K+
Sbjct: 138 FKVYLIGGEMREITESFAGDMTNSALETMRFSKMFFSANGVKGMDVMTSSHEEAYT-QKL 196
Query: 108 IAHAASRFIVIGDESK 123
+ ++ D SK
Sbjct: 197 ALRNSIEKYLLVDSSK 212
>gi|300870742|ref|YP_003785613.1| DeoR family transcriptional regulator [Brachyspira pilosicoli
95/1000]
gi|300688441|gb|ADK31112.1| transcriptional regulator, DeoR family [Brachyspira pilosicoli
95/1000]
Length = 246
Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 16/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA--DKIA---NGFRVQVIPSSRNTE 59
+ K + A V G + + G++ + L+ + I NG ++ E
Sbjct: 75 EEKERIGKFAASLVKSGNIIYLDAGTSVSAMIKYLSGIENIKVVTNGLNHIEELCNKKIE 134
Query: 60 NFCKIHHIPLHSPEDVS----------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + + + V + DL+ G + +D AL + A
Sbjct: 135 SYLIGGKMKMLTGALVGASAVLYLKSFNFDLAFMGANGVDVNGYSTPDNEEAL-IKNEAA 193
Query: 110 HAASRFIVIGDESKR 124
A + + DESK
Sbjct: 194 SKAKKTYFLCDESKL 208
>gi|229086287|ref|ZP_04218467.1| Fructose repressor [Bacillus cereus Rock3-44]
gi|228697030|gb|EEL49835.1| Fructose repressor [Bacillus cereus Rock3-44]
Length = 249
Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q K+ A++A +V G + + GST E + L DK + N R
Sbjct: 77 QAKKEIAKQAASFVAKGDCIYLDAGSTTFEMISYLTDKEVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + + D G + + +L + +K+
Sbjct: 137 YLLGGMMKSRTKALIGAMAQEGIKQY-RFDKCFLGANGVHEQLGYTTPDPEEAMIKKMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + IE
Sbjct: 196 KLANEGYFLIDESKFSEVAFAKIASIE 222
>gi|255279756|ref|ZP_05344311.1| glucitol operon repressor [Bryantella formatexigens DSM 14469]
gi|255269529|gb|EET62734.1| glucitol operon repressor [Bryantella formatexigens DSM 14469]
Length = 254
Score = 39.5 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRV-----------Q 50
K++ A Y+ DG + + +GST E + K + + ++
Sbjct: 78 AKKSIGIAAANYIKDGDIIILDSGSTTLEIAKNITQKNITVVTDDIKIAMELSGRENVTV 137
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
++ ++ + V+ + G D +D + G + + +
Sbjct: 138 IVCGGTLSDPVYTLTGNIAVDFFSRLHVNKTFLGCDAVDLDFGISNRTYGEVDIKSAMIR 197
Query: 111 AASRFIVIGDESKR 124
AA I++ D SK
Sbjct: 198 AADEIIMVTDNSKL 211
>gi|326800661|ref|YP_004318480.1| DeoR family transcriptional regulator [Sphingobacterium sp. 21]
gi|326551425|gb|ADZ79810.1| transcriptional regulator, DeoR family [Sphingobacterium sp. 21]
Length = 247
Score = 39.5 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ K+ A++AI + DGM + +G G+T E L +K+
Sbjct: 74 ESKKTIAQKAITLIQDGMAVLLGGGTTMLELARTLPEKMQ 113
>gi|229167731|ref|ZP_04295464.1| Transcriptional regulator, DeoR [Bacillus cereus AH621]
gi|228615687|gb|EEK72779.1| Transcriptional regulator, DeoR [Bacillus cereus AH621]
Length = 262
Score = 39.5 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 22/142 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A + V D + + G+T + + + DK IP+
Sbjct: 80 EEKRKIAMEASKLVEDNDIIAIEIGTTTMQILDYIYDKKNLTILTNSIPAVNKIIELKDQ 139
Query: 65 HHIPLHSPE----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ D +V+ D I L Y
Sbjct: 140 YDSFDCRLIVIGGILNTNSLALSGEMTLNYLDHFTVNKLFASCDGISLEKELTCSYIEDA 199
Query: 103 LREKIIAHAASRFIVIGDESKR 124
K + + A + +++ DESK
Sbjct: 200 QIYKQLKNNAKQVVMMADESKF 221
>gi|312890608|ref|ZP_07750143.1| transcriptional regulator, DeoR family [Mucilaginibacter paludis
DSM 18603]
gi|311296907|gb|EFQ74041.1| transcriptional regulator, DeoR family [Mucilaginibacter paludis
DSM 18603]
Length = 254
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A + ++++ +G T+ + +GST +A K+ +V VI
Sbjct: 77 DKKEIIAIKCLEFIQNGDTIILDSGSTTT----EIARKLKGNRKVTVIT 121
>gi|126650336|ref|ZP_01722564.1| Transcriptional regulator, DeoR family protein [Bacillus sp.
B14905]
gi|126592986|gb|EAZ86968.1| Transcriptional regulator, DeoR family protein [Bacillus sp.
B14905]
Length = 261
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 1/119 (0%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A +A ++V G + + GST + L + N + S +
Sbjct: 80 EEKKRIAYQAARFVQTGDVILIDEGSTTLHLVNFL-RHVENLTIITNSFSIVEKLIIARN 138
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESK 123
+ + + + + ++K + A + + D+ K
Sbjct: 139 NKLFNGEVIFIGGIVNAQHFRTSGLISEEILKNLSVNKAFVSVDAINSKSGLTCFDKEK 197
>gi|28379124|ref|NP_786016.1| transcription regulator [Lactobacillus plantarum WCFS1]
gi|28271962|emb|CAD64867.1| transcription regulator [Lactobacillus plantarum WCFS1]
Length = 251
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 16/46 (34%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI 52
K A A V D T+ + +GST L + + +
Sbjct: 73 KHKIAEAAATLVQDNETIMIESGSTCALLAEELGKSGKHVTIITIS 118
>gi|291537149|emb|CBL10261.1| Transcriptional regulators of sugar metabolism [Roseburia
intestinalis M50/1]
Length = 247
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 26/151 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K A+ A + G + + G+T + + + A V ++ T
Sbjct: 80 AKEKIAKYAAGLIEPGDFVYIDAGTTTDLMIDFITVRQA------VFVTNAITHAKKLAQ 133
Query: 66 HIPLHSP--EDVSSVDLSIDGFDEIDS--RLRLIKGYGGAL----------------LRE 105
+ +V +I G + + S + KG+ GA L +
Sbjct: 134 KGCTVYILGGEFKTVTEAIVGEEAVSSVEKYNFTKGFWGANGISMQRGFSTPELKEALVK 193
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K ++ D+SK P E
Sbjct: 194 KRSMENCRDCYILADDSKFNQISSVTFAPFE 224
>gi|255034158|ref|YP_003084779.1| transcriptional regulator, DeoR family [Dyadobacter fermentans DSM
18053]
gi|254946914|gb|ACT91614.1| transcriptional regulator, DeoR family [Dyadobacter fermentans DSM
18053]
Length = 252
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K A RA YV DG T+ + GST L K
Sbjct: 77 AKELIAERAASYVQDGDTIFLDCGSTVFRMCHYLKKK 113
>gi|188491959|ref|ZP_02999229.1| transcriptional regulator, DeoR family [Escherichia coli 53638]
gi|226524741|ref|NP_417215.2| predicted transcriptional regulator, DeoR family [Escherichia coli
str. K-12 substr. MG1655]
gi|256024757|ref|ZP_05438622.1| putative DNA-binding transcriptional regulator [Escherichia sp.
4_1_40B]
gi|301027342|ref|ZP_07190683.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|307139423|ref|ZP_07498779.1| putative DNA-binding transcriptional regulator [Escherichia coli
H736]
gi|269849515|sp|P52598|YGBI_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator
ygbI
gi|188487158|gb|EDU62261.1| transcriptional regulator, DeoR family [Escherichia coli 53638]
gi|226510968|gb|AAC75777.2| predicted transcriptional regulator, DeoR family [Escherichia coli
str. K-12 substr. MG1655]
gi|260448214|gb|ACX38636.1| transcriptional regulator, DeoR family [Escherichia coli DH1]
gi|299879335|gb|EFI87546.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|315137342|dbj|BAJ44501.1| putative DNA-binding transcriptional regulator [Escherichia coli
DH1]
gi|323935708|gb|EGB32022.1| deoR family protein Bacterial regulatory protein [Escherichia coli
E1520]
Length = 255
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 76 MTQ---KAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|300711398|ref|YP_003737212.1| DeoR-type DNA-binding transcriptional regulator [Halalkalicoccus
jeotgali B3]
gi|299125081|gb|ADJ15420.1| DeoR-type DNA-binding transcriptional regulator [Halalkalicoccus
jeotgali B3]
Length = 255
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFM 36
+ K A A++ + + +GST E +
Sbjct: 77 EAKEAIATAAVEEIQPDQVVFFDSGSTTMEVI 108
>gi|255534021|ref|YP_003094393.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
gi|255347005|gb|ACU06331.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
Length = 248
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 24/142 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENF 61
A K A++ +Q + DGM + G G++ +I L ++ S
Sbjct: 72 AKDAKIIIAKKTLQLIKDGMVILTGGGTS----IIELVKRLPENLTATFFTISPFVAIEL 127
Query: 62 CK-----------------IHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGAL 102
K H +S ++ L + G I + L
Sbjct: 128 SKYTRVEVILIGGLFSKNSQVTYGGHVINQLSEINADLCLLGTSAIHPQDGLTDTDWEIN 187
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+K I ++ R ++ K
Sbjct: 188 QLKKAIFSSSKRAAILCISEKL 209
>gi|149280693|ref|ZP_01886804.1| transcriptional regulator, DeoR family protein [Pedobacter sp.
BAL39]
gi|149228558|gb|EDM33966.1| transcriptional regulator, DeoR family protein [Pedobacter sp.
BAL39]
Length = 248
Score = 39.5 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 16/149 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV----------- 51
A + K + ++AI ++DGM + G G+T E + L + + F
Sbjct: 72 AKEAKLSIGKKAISLIIDGMVVLTGGGTTVIELVKQLPENLHATFFTISPLVAIELAKYP 131
Query: 52 ---IPSSRNTENFCKIHHIPLHSPEDVSSV--DLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + +S + DL + G I L +K
Sbjct: 132 RIEVILIGGLFSKNSQVTYGGQVINQLSEITADLCLLGTSAIHPVDGLTDTDWEINQLKK 191
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ +A+ + V+ K L + PI
Sbjct: 192 TMLNASKKTAVLCISEKLNIALRLKVAPI 220
>gi|282864589|ref|ZP_06273644.1| transcriptional regulator, DeoR family [Streptomyces sp. ACTE]
gi|282560528|gb|EFB66075.1| transcriptional regulator, DeoR family [Streptomyces sp. ACTE]
Length = 263
Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 17/139 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A A + V +GMT+ + G+T + LLA + T +F +
Sbjct: 87 KQAMATAAAELVREGMTVYLDAGTTLLAMVPLLARH---------TSLTVVTNDFTTVDR 137
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDESKRVD 126
+ + DV + ++D R G A ++ A FI
Sbjct: 138 LMASTHLDVIHIG------GQVDPSNRSSVGRLAATTLRQLALDIA--FISTSSWDLLRG 189
Query: 127 FLGRGMLPIEIDQFGVNKT 145
+E+ Q + T
Sbjct: 190 VTTPSAAKVEVKQAAMECT 208
>gi|115377524|ref|ZP_01464724.1| transcriptional Regulator, DeoR family [Stigmatella aurantiaca
DW4/3-1]
gi|115365464|gb|EAU64499.1| transcriptional Regulator, DeoR family [Stigmatella aurantiaca
DW4/3-1]
Length = 298
Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K+ A+ A V G L + G+T +A + R VI S
Sbjct: 120 QQPAKQALAKVAADMVRPGQVLFIDGGTTTL----EIARHLPRDLRATVITVSAPVAMAL 175
Query: 63 KIHHIPLHSP 72
H
Sbjct: 176 SEHTGIEVHL 185
>gi|326800015|ref|YP_004317834.1| DeoR family transcriptional regulator [Sphingobacterium sp. 21]
gi|326550779|gb|ADZ79164.1| transcriptional regulator, DeoR family [Sphingobacterium sp. 21]
Length = 257
Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 2 DALQM--KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ + K A + I+Y+ G ++ + +GST +A K+ + VI
Sbjct: 76 NQDNLDKKEKIASKCIEYIESGDSIILDSGSTTT----EIAKKLKGFKNLTVIT 125
>gi|222082098|ref|YP_002541463.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
gi|221726777|gb|ACM29866.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
Length = 270
Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 41/147 (27%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA---------------DKIANGFRV 49
KR AR+A + G + + G+T + + ++ + +
Sbjct: 81 DKKRAIARKAAELCNPGDAIIINGGTTTFQLVHYISAFRLQVMTNSFAIAEHLVKHSKNT 140
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+P I + G + + +K++
Sbjct: 141 VTVPGGAIYREQSLILSPFDNDTTRNFYARRMFIGAQGVGPLGIMEADALLIQSEQKLM- 199
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A IV+ D SK + P+E
Sbjct: 200 RQADEMIVMVDSSKFKQRSSLILCPLE 226
>gi|110799326|ref|YP_694543.1| putative transcriptional regulator IolR [Clostridium perfringens
ATCC 13124]
gi|110673973|gb|ABG82960.1| putative transcriptional regulator IolR [Clostridium perfringens
ATCC 13124]
Length = 256
Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 40/134 (29%), Gaps = 16/134 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
K + A +++ DG ++ + +G+T + L DK + + ++ ++
Sbjct: 77 KLALGKAAAEFIEDGYSIFLDSGTTTVNIIDFLKDKKDITIFTNSVTAICKGIHYNNLNI 136
Query: 66 ----------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE-----KIIAH 110
+ + +K +E K
Sbjct: 137 ICLSGILNRKTQSFTGLHSTDILKSYNINKCFMACTGISLKRGVTNSTKEEFKIKKTAIS 196
Query: 111 AASRFIVIGDESKR 124
++ ++ D+SK
Sbjct: 197 RSAECFLLADQSKF 210
>gi|297154370|gb|ADI04082.1| transcriptional regulator, DeoR family protein [Streptomyces
bingchenggensis BCW-1]
Length = 261
Score = 39.5 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 27/144 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK------------------------ 42
K+ Q + G +G+ G+T E +A +
Sbjct: 78 KQRIGAAVAQMIDPGAIVGLNGGTTTTEAARAIATRADLTAPGGAPAVTIVTNALNIAGE 137
Query: 43 IANGFRVQVIPSSRNTENFCKIHHIP--LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGG 100
+A +++++ + P + V S+D+++ G D +D + G
Sbjct: 138 LAVRPQIKIVLTGGVARPQSFELMGPLATGVLDQV-SLDVAVIGVDALDLTQGATAHHEG 196
Query: 101 ALLREKIIAHAASRFIVIGDESKR 124
++A A R IV+ D +K
Sbjct: 197 EASINHLMARRAERVIVVADSTKL 220
>gi|189085576|gb|ACD75522.1| lactose phosphotransferase system repressor [Lactobacillus sakei]
Length = 255
Score = 39.5 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T ++ + L K G+++++I
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTVEQLALEL--KGRKGYKIRIIT 124
>gi|319893148|ref|YP_004150023.1| Lactose phosphotransferase system repressor [Staphylococcus
pseudintermedius HKU10-03]
gi|317162844|gb|ADV06387.1| Lactose phosphotransferase system repressor [Staphylococcus
pseudintermedius HKU10-03]
Length = 250
Score = 39.5 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K A++A + + DG + +G G+T + +
Sbjct: 78 EEKLEIAKKAAKLIEDGNVIFLGPGTTVEMLAKEI 112
>gi|261210772|ref|ZP_05925064.1| transcriptional repressor of aga operon [Vibrio sp. RC341]
gi|260840257|gb|EEX66837.1| transcriptional repressor of aga operon [Vibrio sp. RC341]
Length = 256
Score = 39.5 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGST----AKEFMIL-----------LADKIANG 46
+ +K A V DG TL + +GST A +A +AN
Sbjct: 75 NQD-IKSQLGAYAASLVEDGDTLILDSGSTTEQIAFHLTDKKQLKVMTNAINIAYHLANH 133
Query: 47 FRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++VI + +N+ + L + + L +DGFD++ G
Sbjct: 134 DNIEVIVTGGLMRKNSYSLHGESGEALLGQFRFNKLFLGVDGFDKLAGVTTPHAGEASI- 192
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + AA I + D SK
Sbjct: 193 --NRRMVEAAQMVIAVTDSSKF 212
>gi|171318216|ref|ZP_02907380.1| transcriptional regulator, DeoR family [Burkholderia ambifaria
MEX-5]
gi|171096610|gb|EDT41503.1| transcriptional regulator, DeoR family [Burkholderia ambifaria
MEX-5]
Length = 252
Score = 39.5 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
+ KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 75 EAKRTIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGDCTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA +++ D SK
Sbjct: 194 MIAAAGTAVIVADHSKF 210
>gi|260459894|ref|ZP_05808147.1| transcriptional regulator, DeoR family [Mesorhizobium opportunistum
WSM2075]
gi|259034105|gb|EEW35363.1| transcriptional regulator, DeoR family [Mesorhizobium opportunistum
WSM2075]
Length = 256
Score = 39.5 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 42/140 (30%), Gaps = 21/140 (15%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK------------IANGFRVQ 50
A + K+ A A+ + G T+ + GSTA LAD I
Sbjct: 75 ATEEKQRLAAAAVAMIEPGQTVIIDDGSTAGGIARHLADLRPLTVISNNLAVIQELAGAG 134
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE----- 105
I + K H + S L D I G +
Sbjct: 135 GINLIALGGQYSKKFHGFFGLLAEAS---LKSLRADVAFLSSSAIHGASAFHQDQEVVQS 191
Query: 106 -KIIAHAASRFIVIGDESKR 124
+++ AA+R ++ D K
Sbjct: 192 KRLMMAAATRNYLLVDHGKF 211
>gi|253574314|ref|ZP_04851655.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251846019|gb|EES74026.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 262
Score = 39.1 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 26/167 (15%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
D + K R A + + G T+ + G+T E +A + + + +
Sbjct: 76 DKAEEKERIGRAAAELIESGDTIAIDIGTTTLEMAKAIAGRERLTILTNSLAVAYHLMES 135
Query: 62 CKIHHIPLHSPEDVSSV-----------------DLSIDGFDEIDSRLRLIKG---YGGA 101
+ +D + L +G Y
Sbjct: 136 LNGGRFSGKIFVVGGELNPEQQSLSGTIGEHILSQFRVDKAFISIGGISLERGISDYDVD 195
Query: 102 LL-REKIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLS 147
+ + AASR IV+ D SK +EI +
Sbjct: 196 ETGMSRRMIEAASRTIVLADASKLGKEAF-----VEIVPLSQVHAIV 237
>gi|225870635|ref|YP_002746582.1| DeoR family regulatory protein [Streptococcus equi subsp. equi
4047]
gi|225700039|emb|CAW94074.1| DeoR family regulatory protein [Streptococcus equi subsp. equi
4047]
Length = 237
Score = 39.1 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 16/164 (9%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTEN 60
Q+K A++A + V D + + G+T + + L K + N +
Sbjct: 67 QIKEIIAQKAAELVFDNDVIFIDAGTTTEFLLPFLQLKKVTVVTNSIHHATRLVDMAIKT 126
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL---------REKIIAHA 111
++ + + V L D I G A L +K +
Sbjct: 127 IIIGGYVKQTTDASIGHVALEQIRQMNFDKAFLGINGIDEAFLTTPDMEEAVIKKAVIAN 186
Query: 112 ASRFIVIGDESKRVDFLGRGMLP---IEIDQFGVNKTLSALKEV 152
A V+ D +K + P +EI + + +
Sbjct: 187 AKITYVLADATKLGHVSFVKVAPIDRVEIITEKSSTVMLKKIKE 230
>gi|15891451|ref|NP_357123.1| DeoR family transcriptional regulator [Agrobacterium tumefaciens
str. C58]
gi|15159859|gb|AAK89908.1| transcriptional regulator, DeoR family [Agrobacterium tumefaciens
str. C58]
Length = 276
Score = 39.1 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
KR AR+A+ DG + + G+T + + +A + + ++
Sbjct: 81 DKKRAIARKAVDLCNDGDAIILNGGTTTFQMVHYMAARRLQVMTNSFAIAEHLVKHSKCN 140
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEID--------------SRLRLIKGYGGALLREKIIAH 110
++P + S+ LS D I L +++ + E+ +
Sbjct: 141 VNVPGGAIYRDQSLILSPFENDAIRNFYARRIFLGAQGVGALGIMESDALVIQSEQKLMR 200
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
A IV+ D SK + P+E
Sbjct: 201 QAEELIVMVDSSKFRKRSSLILCPLE 226
>gi|257452365|ref|ZP_05617664.1| DeoR family transcriptional regulator [Fusobacterium sp. 3_1_5R]
gi|317058908|ref|ZP_07923393.1| transcriptional regulator [Fusobacterium sp. 3_1_5R]
gi|313684584|gb|EFS21419.1| transcriptional regulator [Fusobacterium sp. 3_1_5R]
Length = 261
Score = 39.1 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 18/136 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------SR 56
K+ A +A++ + MT+ + G+T E L+A RV +
Sbjct: 79 KKRIAEKALEEIRSNMTIILDAGTTTYELACLIAQSSIQNLRVITNDLYIALELYQKENI 138
Query: 57 NTENFCKIHHIPLHSPEDVSSV--------DLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ V S+ D++ G I L + + ++ I
Sbjct: 139 KIILLGGEVARETGATTSVLSIKQIENYNADIAFLGISSISDNLDITVPTEVKAILKRSI 198
Query: 109 AHAASRFIVIGDESKR 124
+ + I++ D SK
Sbjct: 199 MKISEKNILLTDYSKF 214
>gi|259907259|ref|YP_002647615.1| DNA-bindng transcriptional repressor SrlR [Erwinia pyrifoliae
Ep1/96]
gi|224962881|emb|CAX54362.1| Repressor of srl operon [Erwinia pyrifoliae Ep1/96]
gi|283477071|emb|CAY72966.1| repressor of srl operon [Erwinia pyrifoliae DSM 12163]
gi|310765250|gb|ADP10200.1| DNA-bindng transcriptional repressor SrlR [Erwinia sp. Ejp617]
Length = 255
Score = 39.1 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD---------------KIANGFRV 49
+ K++ ARRA + + +G +L GST + + LA ++
Sbjct: 76 EKKKHIARRAAELINEGDSLIFDAGSTVLQMVPYLARYNNITVMTNSLTIVNQLVEHDND 135
Query: 50 QVI-----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
QVI RN+ +F S + ++ + DG D + +
Sbjct: 136 QVILMPGGTYRRNSASFHGSVAESAFSHFNFDTLFIGADGVDLTAG----VTTFNEVFSV 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + AA + +++ D SK
Sbjct: 192 SQAMCRAAKKIVLLVDSSKF 211
>gi|325527029|gb|EGD04464.1| DeoR family regulatory protein [Burkholderia sp. TJI49]
Length = 252
Score = 39.1 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 75 DAKRLIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGECTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 194 MIAAAGTAIIVADHSKF 210
>gi|163847844|ref|YP_001635888.1| regulatory protein DeoR [Chloroflexus aurantiacus J-10-fl]
gi|222525716|ref|YP_002570187.1| DeoR family transcriptional regulator [Chloroflexus sp. Y-400-fl]
gi|163669133|gb|ABY35499.1| regulatory protein DeoR [Chloroflexus aurantiacus J-10-fl]
gi|222449595|gb|ACM53861.1| transcriptional regulator, DeoR family [Chloroflexus sp. Y-400-fl]
Length = 260
Score = 39.1 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 34/158 (21%)
Query: 6 MKRNAARR------AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
+K+ AA + A + +VDG T+ + ST + A +IA+ + VI + +
Sbjct: 80 LKQQAAEKERIARIAAELIVDGDTVMLDA-STTAYAI---ARQIADRRNLTVITNGMHLA 135
Query: 60 NFCKIHHIPLHSP------EDVSSVDLSIDGFDEIDSRLRLIKGYGGA--LLREKIIAHA 111
+ D S+ ++ +E+ RL KG+ A L K + +
Sbjct: 136 LALGANPAITTIVIGGQVRGDTGSLTGTL--AEEMLQRLHADKGFFSARGLTVAKGLTES 193
Query: 112 A--------------SRFIVIGDESKRVDFLGRGMLPI 135
+ R I + D SK P+
Sbjct: 194 SIPEGLLKAEMVRHVDRVIAVLDSSKLGQTALTSFCPV 231
>gi|145301165|ref|YP_001144006.1| DeoR family transcriptional regulator [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853937|gb|ABO92258.1| transcriptional regulator, DeoR family [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 258
Score = 39.1 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 43/145 (29%), Gaps = 18/145 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + AR A + + D + + +GST + +L +K + +
Sbjct: 80 KLSIARAAAERIRDHNRVIIDSGSTTSAMIPMLGNKRGLIVMTNSLNVAGALRELENEPT 139
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + + G D ID + + +++A
Sbjct: 140 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDPERGTT-TFNELVGLSRVMA 198
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
+ IV+ + K + LP
Sbjct: 199 EVSREVIVMVESEKIGRKIPNLELP 223
>gi|111026887|ref|YP_708865.1| DeoR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110825426|gb|ABH00707.1| transcriptional regulator, DeoR family [Rhodococcus jostii RHA1]
Length = 231
Score = 39.1 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 16/134 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRV-QVIPSSRNTEN 60
K A RA Q V DG T+ + +GST + + L K I N R+ + + +
Sbjct: 55 KVAIAHRAAQQVADGQTIILDSGSTTYQVALELRHKTDLTIITNDLRIGKYVATIPAVRL 114
Query: 61 FCKIHHIPLHSPEDVSS----------VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ V D + G D ID + + ++ I
Sbjct: 115 LVTGGELLGSVFTLVGERAVDFLSDYSADWAFLGADAIDPIAGITNTNTLEVPLKRAIIT 174
Query: 111 AASRFIVIGDESKR 124
AA+R V+ D SK
Sbjct: 175 AATRTAVVADSSKF 188
>gi|304398091|ref|ZP_07379966.1| transcriptional regulator, DeoR family [Pantoea sp. aB]
gi|304354377|gb|EFM18749.1| transcriptional regulator, DeoR family [Pantoea sp. aB]
Length = 258
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR AR A Q + G TL + GST L
Sbjct: 73 TQTREKRAIARAAAQLLQPGQTLFLDAGSTTTLLAEEL 110
>gi|300977710|ref|ZP_07174017.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|300308230|gb|EFJ62750.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
Length = 119
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTA 32
MKR+ A+ A++ + G + + +G+T
Sbjct: 87 MKRSVAKAAVELIQPGHRVLLDSGTTT 113
>gi|255532686|ref|YP_003093058.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
gi|255345670|gb|ACU04996.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
Length = 254
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 30/145 (20%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN---- 57
D L K A++ ++++ G T+ + +GST +A K+ + VI ++ N
Sbjct: 74 DHLDKKELIAKKCLEFIEAGDTIILDSGSTTT----EIAKKLKGIKNLTVITNALNIALL 129
Query: 58 -------------------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY 98
T + + +V + L+ G
Sbjct: 130 LGVEPGIEVIMTGGEFKPPTLSLTGQKAADFFNGLNVHKLFLATAGLSLKAGLTYPSIS- 188
Query: 99 GGALLREKIIAHAASRFIVIGDESK 123
L+ +K + +AA ++ D +K
Sbjct: 189 --DLVVKKAMINAAETTYLVADSTK 211
>gi|107100924|ref|ZP_01364842.1| hypothetical protein PaerPA_01001954 [Pseudomonas aeruginosa PACS2]
Length = 258
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 15/150 (10%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS 54
M+ Q KR AR A G ++ + TG+T F LA + I N +
Sbjct: 72 MNEHAQEKRAVARYAAGLFGPGDSIFIDTGTTTLLFARELARQSHLTVITNSLLIAGSVG 131
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA--- 111
+ F S ++V ++ + + + + G + I A
Sbjct: 132 ASGNRAFMIGGEYRPESEQNVGALAIEQIARFNAEHAVITVGALNGDGAMDFSIEEAEIA 191
Query: 112 ------ASRFIVIGDESKRVDFLGRGMLPI 135
A + VI D SK + P+
Sbjct: 192 RAMIAQARQLTVIADSSKLGRRALFQVFPL 221
>gi|16264551|ref|NP_437343.1| putative transcriptional regulator, deoR family protein
[Sinorhizobium meliloti 1021]
gi|307319386|ref|ZP_07598814.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
AK83]
gi|15140688|emb|CAC49203.1| putative transcriptional regulator, deoR family protein
[Sinorhizobium meliloti 1021]
gi|306895008|gb|EFN25766.1| transcriptional regulator, DeoR family [Sinorhizobium meliloti
AK83]
Length = 263
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 28/187 (14%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQ 50
KR A A +++ T+ + G+T + + L+ A+++ ++
Sbjct: 80 AKRQACIHAARHIRPDETIFIDCGTTLEYLVELIPDDYSITAICYSMNTAERLTRKTNLR 139
Query: 51 VIPSSRNTENFCKIHHI-PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE---- 105
++ P + D ++++ ID +G E
Sbjct: 140 MVMLGGVYHPSSASFSGAPGIATLDQLGINVAFLSAAGIDPA----RGATCVHFHEVPVK 195
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLR 165
+ + A ++ D SK P ++ E A L +
Sbjct: 196 QKVISLARENYLVADSSKLGKLKAAFFAP----PSAFRSLITEDGETALAADLMPAPGMY 251
Query: 166 RNGSGLF 172
+G
Sbjct: 252 ESGQPRL 258
>gi|223932098|ref|ZP_03624102.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
gi|223899079|gb|EEF65436.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
Length = 261
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 49/146 (33%), Gaps = 15/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPSSRNT 58
Q KR A RA Q +V+G + + G+T + L + V+++ T
Sbjct: 91 QEKREIAERAAQQIVNGDVIFLDAGTTTGVLIDYLQQENLTVVTNSIHHAVRLVERKIKT 150
Query: 59 E------NFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + E + ++ + G + ID A ++ I
Sbjct: 151 IIIGGFVKQSTDASVGAVALEQIRQLNFDKAFLGMNGIDKNYFTTPDIEEA-TIKRTIID 209
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
A V+ D SK F + IE
Sbjct: 210 NAKESYVLADASKIGQFSFVKVAAIE 235
>gi|15596687|ref|NP_250181.1| transcriptional regulator [Pseudomonas aeruginosa PAO1]
gi|116049434|ref|YP_791763.1| putative transcriptional regulator [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218892636|ref|YP_002441505.1| putative transcriptional regulator [Pseudomonas aeruginosa LESB58]
gi|254234587|ref|ZP_04927910.1| hypothetical protein PACG_00449 [Pseudomonas aeruginosa C3719]
gi|254239839|ref|ZP_04933161.1| hypothetical protein PA2G_00467 [Pseudomonas aeruginosa 2192]
gi|9947445|gb|AAG04879.1|AE004578_1 probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
gi|115584655|gb|ABJ10670.1| putative transcriptional regulator [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166518|gb|EAZ52029.1| hypothetical protein PACG_00449 [Pseudomonas aeruginosa C3719]
gi|126193217|gb|EAZ57280.1| hypothetical protein PA2G_00467 [Pseudomonas aeruginosa 2192]
gi|218772864|emb|CAW28676.1| probable transcriptional regulator [Pseudomonas aeruginosa LESB58]
Length = 258
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 15/150 (10%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS 54
M+ Q KR AR A G ++ + TG+T F LA + I N +
Sbjct: 72 MNEHAQEKRAVARYAAGLFGPGDSIFIDTGTTTLLFARELARQSHLTVITNSLLIAGSVG 131
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA--- 111
+ F S ++V ++ + + + + G + I A
Sbjct: 132 ASGNRAFMIGGEYRPESEQNVGALAIEQIARFNAEHAVITVGALNGDGAMDFSIEEAEIA 191
Query: 112 ------ASRFIVIGDESKRVDFLGRGMLPI 135
A + VI D SK + P+
Sbjct: 192 RAMIAQARQLTVIADSSKLGRRALFQVFPL 221
>gi|313900327|ref|ZP_07833821.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
gi|312954876|gb|EFR36550.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
Length = 267
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
Q K A+ A QYV DG T+ + T STA + + +K
Sbjct: 78 EQYKHAIAKYAAQYVQDGDTIFINTSSTALLVLKYIKNK 116
>gi|194014347|ref|ZP_03052964.1| DNA-binding protein IolR [Bacillus pumilus ATCC 7061]
gi|194013373|gb|EDW22938.1| DNA-binding protein IolR [Bacillus pumilus ATCC 7061]
Length = 253
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 15/137 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIP----- 53
L K+ + A +V +G + + +G+T E + L +K + N
Sbjct: 73 QLNKKQLIGQTAAAFVENGDMIFVDSGTTTLEMLPYLTEKQVTVVTNNVDFITQAMPYEN 132
Query: 54 -SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR-----EKI 107
+ +T + + V + I S I +K
Sbjct: 133 FTIFSTGGMLERKTNSFVGYQSVERLKAYNVNKAFIASTGLSIDHGVTNSSPLETDIKKT 192
Query: 108 IAHAASRFIVIGDESKR 124
+ +++ ++ D+SK
Sbjct: 193 VVEKSAKTFLLVDDSKF 209
>gi|292489536|ref|YP_003532424.1| repressor of srl operon [Erwinia amylovora CFBP1430]
gi|292898250|ref|YP_003537619.1| glucitol operon repressor [Erwinia amylovora ATCC 49946]
gi|2342571|emb|CAA74946.1| repressor of srl operon [Erwinia amylovora]
gi|291198098|emb|CBJ45201.1| glucitol operon repressor (DeoR-family transcriptional regulator)
[Erwinia amylovora ATCC 49946]
gi|291554971|emb|CBA22972.1| repressor of srl operon [Erwinia amylovora CFBP1430]
gi|312173708|emb|CBX81962.1| repressor of srl operon [Erwinia amylovora ATCC BAA-2158]
Length = 255
Score = 39.1 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD---------------KIANGFRV 49
+ K++ ARRA + + +G +L GST + + LA ++
Sbjct: 76 EKKKHIARRAAELINEGDSLIFDAGSTVLQMVPYLARFNNITVMTNSLTIVNQLVEHDSD 135
Query: 50 QVI-----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+V+ RN+ +F S + ++ + DG D + +
Sbjct: 136 RVVLMPGGTYRRNSASFHGSVAESAFSHFNFDTLFIGADGVDLTAG----VTTFNEVFSV 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + AA + +++ D SK
Sbjct: 192 SQAMCRAAKKIVLLVDSSKF 211
>gi|270262095|ref|ZP_06190367.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
gi|270043971|gb|EFA17063.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
Length = 248
Score = 39.1 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
M +K+ AR A V DG T+ + +GST +A++
Sbjct: 67 MSNFSLKQKLARFAAAQVNDGETIFIESGSTNALLARYIAER 108
>gi|257869249|ref|ZP_05648902.1| regulatory protein [Enterococcus gallinarum EG2]
gi|257803413|gb|EEV32235.1| regulatory protein [Enterococcus gallinarum EG2]
Length = 251
Score = 39.1 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 23/149 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A+ + + + G+T E + L+ + V+V+ +S
Sbjct: 79 KQKIAQYAVSLIKKDEVIYLDAGTTTLEMIPFLS----SISNVKVVTNSVKHAALLIDQG 134
Query: 67 IPLHSPEDVSSVD---LSIDGFDEIDSR---LRLIKGYGGAL-------------LREKI 107
I + + G E + R G GA + +KI
Sbjct: 135 IETLILGGTIKISTNAVLGSGASEQLRKLRFNRCFIGMNGAHVDAGFTTPDPEEAMIKKI 194
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + V+ D SK + IE
Sbjct: 195 AIENSQKAYVLLDHSKFQQTTFAQVAAIE 223
>gi|269139416|ref|YP_003296117.1| transcriptional regulator, DeoR family [Edwardsiella tarda EIB202]
gi|267985077|gb|ACY84906.1| transcriptional regulator, DeoR family [Edwardsiella tarda EIB202]
gi|304559312|gb|ADM41976.1| Transcriptional regulatory protein YciT [Edwardsiella tarda FL6-60]
Length = 252
Score = 39.1 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
M +K+ A A V DG T+ + +GST LA++
Sbjct: 67 MINFTLKQQLAAYAASLVNDGETIFIESGSTNALLARYLAERKQ 110
>gi|13476060|ref|NP_107630.1| hypothetical protein mlr7274 [Mesorhizobium loti MAFF303099]
gi|14026820|dbj|BAB53416.1| mlr7274 [Mesorhizobium loti MAFF303099]
Length = 282
Score = 39.1 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 42/140 (30%), Gaps = 21/140 (15%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK------------IANGFRVQ 50
A + K+ A A+ + G T+ + GSTA LAD I
Sbjct: 101 ATEEKQRLAAAAVAMIEPGQTVIIDDGSTAGGIARHLADLRPLTVISNNLAVIQELAGAG 160
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE----- 105
I + K H + S L D I G +
Sbjct: 161 GINLIALGGQYSKKFHGFFGLLAEAS---LKSLRADVAFLSSSAIHGASAFHQDQEVVQA 217
Query: 106 -KIIAHAASRFIVIGDESKR 124
+++ AA+R ++ D K
Sbjct: 218 KRLMMAAATRKYLLVDHGKF 237
>gi|310820071|ref|YP_003952429.1| DeoR family transcriptional regulator [Stigmatella aurantiaca
DW4/3-1]
gi|309393143|gb|ADO70602.1| Transcriptional regulator, DeoR family [Stigmatella aurantiaca
DW4/3-1]
Length = 259
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K+ A+ A V G L + G+T +A + R VI S
Sbjct: 81 QQPAKQALAKVAADMVRPGQVLFIDGGTTTL----EIARHLPRDLRATVITVSAPVAMAL 136
Query: 63 KIHHIPLHSP 72
H
Sbjct: 137 SEHTGIEVHL 146
>gi|255025385|ref|ZP_05297371.1| hypothetical protein LmonocytFSL_01959 [Listeria monocytogenes FSL
J2-003]
Length = 287
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFSRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|167748273|ref|ZP_02420400.1| hypothetical protein ANACAC_03017 [Anaerostipes caccae DSM 14662]
gi|167652265|gb|EDR96394.1| hypothetical protein ANACAC_03017 [Anaerostipes caccae DSM 14662]
Length = 277
Score = 39.1 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 20/137 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A + V DG L + +G+T E LA ++ V + + +N +
Sbjct: 95 KKEIGTAASKLVKDGEFLYLDSGTTTLEMCRALARRLKRKEVKNVTAITNSVKNVDILAS 154
Query: 67 IPLHSP---------EDVS-----------SVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+DVS +D S G D + L +
Sbjct: 155 YCDVILVGGKYSKDRKDVSGNLSESFLTQFRLDKSFLGTDGFTFAEGFMSTSVNVSLLSR 214
Query: 107 IIAHAASRFIVIGDESK 123
+ A V+ D SK
Sbjct: 215 RASSQAGETYVLMDSSK 231
>gi|295400311|ref|ZP_06810290.1| transcriptional regulator, DeoR family [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111163|ref|YP_003989479.1| DeoR family transcriptional regulator [Geobacillus sp. Y4.1MC1]
gi|294977586|gb|EFG53185.1| transcriptional regulator, DeoR family [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216264|gb|ADP74868.1| transcriptional regulator, DeoR family [Geobacillus sp. Y4.1MC1]
Length = 250
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A A V +G + + G+T E + L +G + V+ + +
Sbjct: 77 QEKKRIAEYAASLVQNGDCIYLDAGTTTFEMIPHL-----HGKDIVVVTNGIMHLDMLLE 131
Query: 65 HHIPLHSP 72
+ IP +
Sbjct: 132 YDIPTYLL 139
>gi|312878344|ref|ZP_07738257.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
lactoaceticus 6A]
gi|311794878|gb|EFR11294.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
lactoaceticus 6A]
Length = 266
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 17/146 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA----------------NGFRVQ 50
K + A ++ DG T+ + +G+T + + K + V
Sbjct: 95 KEYIGKLAASFIKDGDTIILDSGTTTQYIARNINAKNITIITNSVNIAYELSNNDNLEVI 154
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
V T+ + I VD + + + + ++ +
Sbjct: 155 VTGGVIRTKTKALVGDITQSILRQF-RVDKAFVAANGVSIEFGVTTPSHVEAAIKRAMIE 213
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
A ++ D SK + P+E
Sbjct: 214 NAKEVFLVADSSKFGQVTFSLICPVE 239
>gi|168333947|ref|ZP_02692179.1| transcriptional regulator, DeoR family protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 253
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 38/136 (27%), Gaps = 18/136 (13%)
Query: 7 KRNAARR--AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K A +V D + + TG+T + L + + F +
Sbjct: 77 KEKVGIAKCAATFVQDSDVIFIDTGTTTAYLINYLGHLNNLTIVTYNVDTIYKALQFPNL 136
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA----------------LLREKII 108
I L ++V L + + + K + + ++ +
Sbjct: 137 KLISLPGMLKHNTVSLVDPEAVNYLANININKAFVSCTGLSIANGICNTSAEEYIIKQAV 196
Query: 109 AHAASRFIVIGDESKR 124
+ ++ D SK
Sbjct: 197 VKKSKESYLLADHSKF 212
>gi|327459535|gb|EGF05881.1| DeoR family transcriptional regulator [Streptococcus sanguinis SK1]
Length = 247
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICRTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ R IV+ D SK
Sbjct: 192 EASDRMIVLTDSSKF 206
>gi|319938763|ref|ZP_08013127.1| lactose phosphotransferase system repressor [Streptococcus
anginosus 1_2_62CV]
gi|319811813|gb|EFW08079.1| lactose phosphotransferase system repressor [Streptococcus
anginosus 1_2_62CV]
Length = 248
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
M ++ KR A++ + G T+ +G+G+T LADK
Sbjct: 73 MLNIEEKRTIAQKCANLIFSGDTVFIGSGTTTDFIGDYLADK 114
>gi|315223207|ref|ZP_07865068.1| DeoR-like helix-turn-helix protein [Streptococcus anginosus F0211]
gi|315187639|gb|EFU21393.1| DeoR-like helix-turn-helix protein [Streptococcus anginosus F0211]
Length = 248
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
M ++ KR A++ + G T+ +G+G+T LADK
Sbjct: 73 MLNIEEKRTIAQKCANLIFSGDTVFIGSGTTTDFIGDYLADK 114
>gi|312889481|ref|ZP_07749033.1| transcriptional regulator, DeoR family [Mucilaginibacter paludis
DSM 18603]
gi|311298033|gb|EFQ75150.1| transcriptional regulator, DeoR family [Mucilaginibacter paludis
DSM 18603]
Length = 248
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI 43
K+ A +AI + DGM + G G+T E + +L +
Sbjct: 76 KKTIAEKAIDLITDGMVVLTGGGTTMIEMVRMLPKTL 112
>gi|239826956|ref|YP_002949580.1| DeoR family transcriptional regulator [Geobacillus sp. WCH70]
gi|239807249|gb|ACS24314.1| transcriptional regulator, DeoR family [Geobacillus sp. WCH70]
Length = 250
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A A V +G + + G+T E + L +G + V+ + +
Sbjct: 77 QEKKRIAEYAASLVQNGDCIYLDAGTTTFEMIPHL-----HGKDIVVVTNGIMHLDMLLE 131
Query: 65 HHIPLHSP 72
+ +P +
Sbjct: 132 YDVPTYLL 139
>gi|328911251|gb|AEB62847.1| Lactose phosphotransferase system represso [Bacillus
amyloliquefaciens LL3]
Length = 253
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
++ K A A YV DG T+ +G G+T + LLA + + R+++I ++ +
Sbjct: 76 QMEEKGKIAELAASYVNDGDTVFLGPGTT----IELLAQHLLHK-RIRIITNNYPVFDIL 130
Query: 63 KIHHIPLHSP 72
K P
Sbjct: 131 KHGDTPDTIL 140
>gi|284032730|ref|YP_003382661.1| DeoR family transcriptional regulator [Kribbella flavida DSM 17836]
gi|283812023|gb|ADB33862.1| transcriptional regulator, DeoR family [Kribbella flavida DSM
17836]
Length = 258
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A A++ + DG T+ + +G+TA E L +
Sbjct: 77 EAKQAIAEAAVEQLRDGETIVLDSGTTALEVARRLRHR 114
>gi|229825646|ref|ZP_04451715.1| hypothetical protein GCWU000182_01008 [Abiotrophia defectiva ATCC
49176]
gi|229790209|gb|EEP26323.1| hypothetical protein GCWU000182_01008 [Abiotrophia defectiva ATCC
49176]
Length = 255
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 13/131 (9%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ R+A + V + T+ + G+T L DK + +P + +
Sbjct: 78 KKLIGRKAAEMVHENDTICIDAGTTTLALAENLKDKKSLSVITNSVPVATILNDTDVHVF 137
Query: 67 IPLHSPEDVS-------------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAAS 113
+P ED+ VD + G + L +K I +A
Sbjct: 138 MPGGMLEDMCLADADTVDYLARHHVDKAFIGASGVSGCRGLTVTSPLQYSVKKQIIKSAD 197
Query: 114 RFIVIGDESKR 124
+ D +K
Sbjct: 198 EVYALIDSTKF 208
>gi|300718868|ref|YP_003743671.1| DeoR-family transcriptional regulatory protein [Erwinia billingiae
Eb661]
gi|299064704|emb|CAX61824.1| DeoR-family transcriptional regulatory protein [Erwinia billingiae
Eb661]
Length = 253
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 47/146 (32%), Gaps = 15/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI----PSS 55
Q K+ A +++ + + G+T L + + N F +
Sbjct: 77 QEKQAIGEAAARHIPRNSCIYLDAGTTTLALARELGMRDDLTIVTNDFVIANFFIDNSQC 136
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDE--IDSRLRLIKG----YGGALLREKIIA 109
R + D +++ L D I + ++G + ++ ++
Sbjct: 137 RMIHTGGTLCRDNRSCVGDAAALALQGLSIDIAFISASCWGMRGIFTPDAEKITVKRAVS 196
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPI 135
+ + +++ D SK LP+
Sbjct: 197 EVSRKRVLLADSSKYNKIATFLALPL 222
>gi|163742021|ref|ZP_02149410.1| transcriptional regulator, DeoR family protein [Phaeobacter
gallaeciensis 2.10]
gi|161384742|gb|EDQ09122.1| transcriptional regulator, DeoR family protein [Phaeobacter
gallaeciensis 2.10]
Length = 278
Score = 39.1 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 55/173 (31%), Gaps = 22/173 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIA--NGF 47
+ K++ A + + DGM + + GST L A +A NG
Sbjct: 81 EEKQSIAAGVLPQITDGMAIFLDVGSTTAFVAKELRCRANLTVVTNSIGVAQTLANHNGN 140
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREK 106
RV + + H+ + +DL++ D L A L
Sbjct: 141 RVHFLGGEIQSNERGTFGHVAEQQVRAFA-LDLAVLSADAFSAKHGALYHSATEAHLAA- 198
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTL--SALKEVASCFG 157
++A AA R ++I K D E+ + L + +G
Sbjct: 199 VVAQAAERTLLILAHPKFDDMAPHRGPQPEMLDLLMTDVLPGRKYRRALETWG 251
>gi|300712505|ref|YP_003738318.1| DeoR-type DNA-binding transcriptional regulator [Halalkalicoccus
jeotgali B3]
gi|299126189|gb|ADJ16527.1| DeoR-type DNA-binding transcriptional regulator [Halalkalicoccus
jeotgali B3]
Length = 252
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 24/139 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN------- 57
KR+ A RA++ + + + +GST ++ LA ++ + + +
Sbjct: 75 DQKRSIAERAVEEIREDQVVAFDSGST----LLELAKRVPKSLPITPMTRMPSVAYELAE 130
Query: 58 ----------TENFCKIHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGALLRE 105
T + + E V ++ L G D ID + A + +
Sbjct: 131 RDHEVYLTGGTYQKEGHSCVGPWADEHVKQMNADLLFLGTDGIDEEGMTAQDIQQAQV-K 189
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A R ++ D SK
Sbjct: 190 RTMIDNARRVVLTVDHSKF 208
>gi|157150247|ref|YP_001450400.1| phosphotransferase system repressor [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075041|gb|ABV09724.1| phosphotransferase system repressor [Streptococcus gordonii str.
Challis substr. CH1]
Length = 247
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 15/143 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----------KIANGFRVQVIPSSR 56
K+ A +A + D + + G+T + + + + A+ + IP+
Sbjct: 79 KQKIAEKAASLIQDHDVVFIDAGTTNELLIQAIHNHRVTIVTNSIHHASKLVERNIPTVI 138
Query: 57 N--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
T I + + ++ + G + ID ++ I A
Sbjct: 139 VGGTVKSSTDASIGGVALNQIGQLNFDKAFIGMNGIDDGFYSTPDMEEG-AVKRAIMENA 197
Query: 113 SRFIVIGDESKRVDFLGRGMLPI 135
+ V+ D SK + P+
Sbjct: 198 KQTYVLSDSSKLGHISFVKVAPL 220
>gi|51492585|ref|YP_067882.1| hypothetical protein pFBAOT6.72 [Aeromonas punctata]
gi|51470628|emb|CAG15119.1| hypothetical protein pFBAOT6.72 [Aeromonas caviae]
Length = 135
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 200 NIPGVIEHGLFINMVDCAIIGTSDGECLVLQK 231
IP V+EHGLF+N +D +I D V ++
Sbjct: 99 AIPDVVEHGLFLNGIDTIVIARGD-TMEVRRR 129
>gi|325962727|ref|YP_004240633.1| transcriptional regulator of sugar metabolism [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468814|gb|ADX72499.1| transcriptional regulator of sugar metabolism [Arthrobacter
phenanthrenivorans Sphe3]
Length = 262
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGM--GTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
D + K+ A+ A + G +G+ GT ST LA +A + PS++ T
Sbjct: 73 DHAEAKQQIAQAASGLIAPGAVIGLCGGTTSTV------LAQILATREDLNA-PSNQPTL 125
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
++ + + G ++ R + G ++ +K++ A
Sbjct: 126 TVVTNAINIASQLAVRPNIKVMVTGG-ILNPRSYELVGPYTDIIMQKVVLDIA 177
>gi|117922557|ref|YP_871749.1| DeoR family transcriptional regulator [Shewanella sp. ANA-3]
gi|117614889|gb|ABK50343.1| transcriptional regulator, DeoR family [Shewanella sp. ANA-3]
Length = 256
Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-----------ADKIANGFR------- 48
K + A+ A Q + D + + +G+T + L A +AN
Sbjct: 78 KLSIAKAAAQLIKDHNRIIIDSGTTTSGIIAELNHKRGLVVMTNALHLANAIHELENEPT 137
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + + + + DG D + G + K
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLARGTTTFNELTGLS----K 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A + IV+ D K + LP
Sbjct: 194 VMAEVSREVIVMVDSDKIGKRIPNLELP 221
>gi|325689505|gb|EGD31510.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK115]
Length = 247
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICRTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ R IV+ D SK
Sbjct: 192 EASDRMIVLTDSSKF 206
>gi|157964046|ref|YP_001504080.1| DeoR family transcriptional regulator [Shewanella pealeana ATCC
700345]
gi|157849046|gb|ABV89545.1| transcriptional regulator, DeoR family [Shewanella pealeana ATCC
700345]
Length = 268
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 16/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + AR A + + D + + +GST + L K + + +
Sbjct: 90 KLSIARAAAELIKDHNRIIIDSGSTTSGLIGELNSKRGLLVMTNSLALANAIHDLENEPT 149
Query: 67 IPLHSPEDVSS------------VDLSIDGFDEIDSRLRLIKGYG---GALLR-EKIIAH 110
+ + + I + ++ L K++A
Sbjct: 150 LLMTGGTWDPHSESFQGQIAEQVLRSYNFDQLFIGADGIDLQRGTTTFNELTGLSKVMAE 209
Query: 111 AASRFIVIGDESKRVDFLGRGMLP 134
+ +V+ + K + LP
Sbjct: 210 VSREVVVMLESEKLGRRIPNLELP 233
>gi|221133571|ref|ZP_03559876.1| Putative transcriptional regulator, DeoR family protein [Glaciecola
sp. HTCC2999]
Length = 264
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
D +KR+ A A Q + G + + +GST + L
Sbjct: 80 DDNPIKRSIASAAAQLIQPGSRIVVDSGSTTAHLLPFLQQ 119
>gi|313677840|ref|YP_004055836.1| transcriptional regulator, deor family [Marivirga tractuosa DSM
4126]
gi|312944538|gb|ADR23728.1| transcriptional regulator, DeoR family [Marivirga tractuosa DSM
4126]
Length = 262
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 22/139 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
+ K+ A+ A++ + + +G+G+T F + + + +
Sbjct: 86 EEKQAIAKAAVESLKMHEAIIIGSGTTVGAFAQAIPRNSNLTVLTSAMNVTMALLDCKDI 145
Query: 50 QVI----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+++ + + + + + S + LS+DG A L
Sbjct: 146 EIVQLGGVVRKGSSSVVGHYAEEMMQSFACSKLYLSVDG--ISLEHGFTTSNMMEAHLNA 203
Query: 106 KIIAHAASRFIVIGDESKR 124
K+I + IV+ D SK
Sbjct: 204 KMIESV-QKTIVLADASKF 221
>gi|291532634|emb|CBL05747.1| Transcriptional regulators of sugar metabolism [Megamonas
hypermegale ART12/1]
Length = 247
Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 25/63 (39%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ K A++A V + + G+T + + L +K A +I + + T+
Sbjct: 76 QITEKNLIAKKAASLVKPHDLIYIDAGTTTELIIDHLTEKKATYITNGIIHAQKLTDKGF 135
Query: 63 KIH 65
K
Sbjct: 136 KAF 138
>gi|299538394|ref|ZP_07051677.1| DeoR family transcriptional regulator [Lysinibacillus fusiformis
ZC1]
gi|298725981|gb|EFI66573.1| DeoR family transcriptional regulator [Lysinibacillus fusiformis
ZC1]
Length = 251
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+ A Q+V D + + +G+T E + + DK
Sbjct: 76 KKQLAQLAAQFVEDNDIIFIDSGTTTLEMLEFIKDK 111
>gi|224541053|ref|ZP_03681592.1| hypothetical protein CATMIT_00204 [Catenibacterium mitsuokai DSM
15897]
gi|224526020|gb|EEF95125.1| hypothetical protein CATMIT_00204 [Catenibacterium mitsuokai DSM
15897]
Length = 251
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
++ K A +A + +G T+ +G G+T + LLA+++ G ++V+
Sbjct: 76 QIEEKTRIAHKAASLIQEGETIFLGPGTT----IQLLAEQLC-GRNIRVVT 121
>gi|134100000|ref|YP_001105661.1| DeoR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|291003008|ref|ZP_06560981.1| DeoR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|133912623|emb|CAM02736.1| transcriptional regulator, DeoR family [Saccharopolyspora erythraea
NRRL 2338]
Length = 259
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+A + K AR A + V DG + + G+T LAD+
Sbjct: 78 NADE-KDAVARAAAELVADGEVVLLDAGTTTSRVARHLADR 117
>gi|291460095|ref|ZP_06599485.1| DNA-binding protein IolR [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417436|gb|EFE91155.1| DNA-binding protein IolR [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 266
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----KIANGFRVQVIPSSRNTEN 60
+ K ++A V +G T+ + TG++ + + ++N RV
Sbjct: 92 EEKDLICKKAAALVKEGDTIFIDTGTSCTNLVKYIGKIPCSIVSNSLRVACNAQPYEKLQ 151
Query: 61 FCKIH------HIPLHSPEDVSSVDLS-IDGFDEIDSRLRLIKGYGGALLRE----KIIA 109
+ + E V + + ID + L L +G A + E K +
Sbjct: 152 LIMLPGTLRRETMSFVGIETVERLRIYNIDKAFMAATGLSLDRGLTNASVYEYNIKKEVI 211
Query: 110 HAASRFIVIGDESKR 124
+ + ++ D SK
Sbjct: 212 SRSRKRFLMADHSKF 226
>gi|242243982|ref|ZP_04798425.1| sugar metabolism transcriptional repressor [Staphylococcus
epidermidis W23144]
gi|242232615|gb|EES34927.1| sugar metabolism transcriptional repressor [Staphylococcus
epidermidis W23144]
Length = 251
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A+ A+ + DG T+ +G G+T LA++I + + K
Sbjct: 78 EEKRFIAKNAVDLIEDGDTIFLGPGTTV----QKLAEEINHYSLTIITNCLPVFNILMKK 133
Query: 65 HHIPL 69
+
Sbjct: 134 QTLHF 138
>gi|329731265|gb|EGG67635.1| transcriptional regulator, DeoR family [Staphylococcus epidermidis
VCU144]
Length = 251
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR A+ A+ + DG T+ +G G+T ++ +
Sbjct: 78 EEKRFIAKNAVDLIEDGDTIFLGPGTTVQKLAEEI 112
>gi|150002957|ref|YP_001297701.1| transcriptional regulator of sugar metabolism [Bacteroides vulgatus
ATCC 8482]
gi|212690598|ref|ZP_03298726.1| hypothetical protein BACDOR_00084 [Bacteroides dorei DSM 17855]
gi|237709633|ref|ZP_04540114.1| DeoR-family transcriptional regulator [Bacteroides sp. 9_1_42FAA]
gi|237725223|ref|ZP_04555704.1| DeoR-family transcriptional regulator [Bacteroides sp. D4]
gi|265754265|ref|ZP_06089454.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294776615|ref|ZP_06742084.1| transcriptional regulator, DeoR family [Bacteroides vulgatus PC510]
gi|319642330|ref|ZP_07996988.1| hypothetical protein HMPREF9011_02588 [Bacteroides sp. 3_1_40A]
gi|149931381|gb|ABR38079.1| transcriptional regulator of sugar metabolism [Bacteroides vulgatus
ATCC 8482]
gi|212666844|gb|EEB27416.1| hypothetical protein BACDOR_00084 [Bacteroides dorei DSM 17855]
gi|229436489|gb|EEO46566.1| DeoR-family transcriptional regulator [Bacteroides dorei 5_1_36/D4]
gi|229456269|gb|EEO61990.1| DeoR-family transcriptional regulator [Bacteroides sp. 9_1_42FAA]
gi|263234974|gb|EEZ20529.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294449530|gb|EFG18061.1| transcriptional regulator, DeoR family [Bacteroides vulgatus PC510]
gi|317386053|gb|EFV66974.1| hypothetical protein HMPREF9011_02588 [Bacteroides sp. 3_1_40A]
Length = 251
Score = 38.7 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 22/138 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL-------------------LADKIAN 45
+ K+ A++AIQ++ +G ++ + +GST E L L +
Sbjct: 77 EEKKEIAQKAIQFIQEGDSIILDSGSTTTEIAKLLMNYKDLTVITNALNIALILGENHGI 136
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
V T + + + L+ G I S ++L L+ +
Sbjct: 137 NLIVTGGEFKAPTLSLTGKMAADSFKDIRANKLFLATAG---ISSDMKLTYPSLSDLVVK 193
Query: 106 KIIAHAASRFIVIGDESK 123
+ +AS+ ++ D SK
Sbjct: 194 SAMIESASKVYLVADCSK 211
>gi|27367416|ref|NP_762943.1| transcriptional repressor of aga operon [Vibrio vulnificus CMCP6]
gi|320159265|ref|YP_004191643.1| transcriptional repressor of aga operon [Vibrio vulnificus
MO6-24/O]
gi|27358985|gb|AAO07933.1| Transcriptional repressor of aga operon [Vibrio vulnificus CMCP6]
gi|319934577|gb|ADV89440.1| transcriptional repressor of aga operon [Vibrio vulnificus
MO6-24/O]
Length = 262
Score = 38.7 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 29/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 79 KQMIAYAAAQLIGDGEAIILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNDNVELH 138
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLR 104
V R + + H + L +DGFD +
Sbjct: 139 VIGGSLRRASCSLTGHHGEQQIRTYLFDKLFLGVDGFDLQAGITTPDNHEAQ-------V 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 192 NRAMCDVARQVIAVTDSSKF 211
>gi|148273701|ref|YP_001223262.1| DeoR family transcriptional regulator [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147831631|emb|CAN02599.1| putative DeoR-family transcriptional regulator [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 275
Score = 38.7 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 28/147 (19%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
A KR R A V G ++ + GST + L + + ++ T
Sbjct: 82 SAADAKRAIGRAAADLVESGQSVLLDVGSTTLQVARALVAR--EDLVDVTVITNGLTLAL 139
Query: 62 CKIHHIP------------LHSPEDVSSVDLSIDGFDEIDSRLRLI--------KGYGGA 101
+P V + + D + + I +G
Sbjct: 140 ELERAMPRFTVVVTGGTLRALQHSLVDPLATVV--LDRLHPDVAFIGCNGIDVDRGVTNV 197
Query: 102 LLRE----KIIAHAASRFIVIGDESKR 124
L E + + A++R +V+ D +K
Sbjct: 198 NLPEAEVKRRMVAASARTVVVADGAKL 224
>gi|331085473|ref|ZP_08334558.1| hypothetical protein HMPREF0987_00861 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407711|gb|EGG87209.1| hypothetical protein HMPREF0987_00861 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 248
Score = 38.7 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
M+ + K+ A+ A + + + + G+T + + ++ A
Sbjct: 76 MNMEE-KQRIAKYAAERIEKNDFVYVDAGTTTGCLIDWICEQGA 118
>gi|319400591|gb|EFV88816.1| lactose phosphotransferase system repressor [Staphylococcus
epidermidis FRI909]
Length = 251
Score = 38.7 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A+ A+ + DG T+ +G G+T LA++I + + K
Sbjct: 78 EEKRFIAKNAVDLIEDGDTIFLGPGTTV----QKLAEEINHYSLTIITNCLPVFNILMKK 133
Query: 65 HHIPL 69
+
Sbjct: 134 QTLHF 138
>gi|170781015|ref|YP_001709347.1| DeoR family transcriptional regulator [Clavibacter michiganensis
subsp. sepedonicus]
gi|169155583|emb|CAQ00700.1| putative DeoR-family transcriptional regulator [Clavibacter
michiganensis subsp. sepedonicus]
Length = 276
Score = 38.7 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 28/146 (19%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
A KR R A V G ++ + GST + L + + + ++ T
Sbjct: 82 SAADAKRAIGRAAADLVESGQSVLLDVGSTTLQVARALVAR--DDLVDVTVITNGLTLAL 139
Query: 62 CKIHHIP------------LHSPEDVSSVDLSIDGFDEIDSRLRLI--------KGYGGA 101
+P V + + D + + I +G
Sbjct: 140 ELERAMPRFTVVVTGGTLRALQHSLVDPLATVV--LDRLHPDVAFIGCNGIDVDRGVTNV 197
Query: 102 LLRE----KIIAHAASRFIVIGDESK 123
L E + + A++R IV+ D SK
Sbjct: 198 NLPEAEVKRRMVDASARTIVVADGSK 223
>gi|37677178|ref|NP_937574.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
YJ016]
gi|37201723|dbj|BAC97544.1| transcriptional regulator of sugar metabolism [Vibrio vulnificus
YJ016]
Length = 263
Score = 38.7 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 29/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 80 KQMIAYAAAQLIGDGEAIILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNDNVELH 139
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLR 104
V R + + H + L +DGFD +
Sbjct: 140 VIGGSLRRASCSLTGHHGEQQIRTYLFDKLFLGVDGFDLQAGITTPDNHEAQ-------V 192
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 193 NRAMCDVARQVIAVTDSSKF 212
>gi|27468706|ref|NP_765343.1| lactose phosphotransferase system repressor [Staphylococcus
epidermidis ATCC 12228]
gi|57867735|ref|YP_189359.1| lactose phosphotransferase system repressor [Staphylococcus
epidermidis RP62A]
gi|251812082|ref|ZP_04826555.1| sugar metabolism transcriptional repressor [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875377|ref|ZP_06284250.1| transcriptional regulator, DeoR family [Staphylococcus epidermidis
SK135]
gi|293368468|ref|ZP_06615092.1| lactose PTS family porter repressor [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81673661|sp|Q5HM34|LACR_STAEQ RecName: Full=Lactose phosphotransferase system repressor
gi|81843481|sp|Q8CRJ1|LACR_STAES RecName: Full=Lactose phosphotransferase system repressor
gi|27316254|gb|AAO05429.1|AE016750_34 lactose phosphotransferase system repressor [Staphylococcus
epidermidis ATCC 12228]
gi|57638393|gb|AAW55181.1| lactose phosphotransferase system repressor [Staphylococcus
epidermidis RP62A]
gi|251804416|gb|EES57073.1| sugar metabolism transcriptional repressor [Staphylococcus
epidermidis BCM-HMP0060]
gi|281296142|gb|EFA88663.1| transcriptional regulator, DeoR family [Staphylococcus epidermidis
SK135]
gi|291317426|gb|EFE57848.1| lactose PTS family porter repressor [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736478|gb|EGG72746.1| transcriptional regulator, DeoR family [Staphylococcus epidermidis
VCU028]
gi|329736994|gb|EGG73249.1| transcriptional regulator, DeoR family [Staphylococcus epidermidis
VCU045]
Length = 251
Score = 38.7 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR A+ A+ + DG T+ +G G+T ++ +
Sbjct: 78 EEKRFIAKNAVDLIEDGDTIFLGPGTTVQKLAEEI 112
>gi|302023717|ref|ZP_07248928.1| sugar metabolism transcriptional regulator [Streptococcus suis
05HAS68]
gi|330832752|ref|YP_004401577.1| DeoR family transcriptional regulator [Streptococcus suis ST3]
gi|329306975|gb|AEB81391.1| transcriptional regulator, DeoR family [Streptococcus suis ST3]
Length = 249
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 49/146 (33%), Gaps = 15/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPSSRNT 58
Q KR A RA Q +V+G + + G+T + L + V+++ T
Sbjct: 79 QEKREIAERAAQQIVNGDVIFLDAGTTTGVLIDYLQQENLTVVTNSIHHAVRLVERKIKT 138
Query: 59 E------NFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + E + ++ + G + ID A ++ I
Sbjct: 139 IIIGGFVKQSTDASVGAVALEQIRQLNFDKAFLGMNGIDKNYFTTPDIEEA-TIKRTIID 197
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
A V+ D SK F + IE
Sbjct: 198 NAKESYVLADASKIGQFSFVKVAAIE 223
>gi|167748353|ref|ZP_02420480.1| hypothetical protein ANACAC_03097 [Anaerostipes caccae DSM 14662]
gi|317472108|ref|ZP_07931440.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
gi|167652345|gb|EDR96474.1| hypothetical protein ANACAC_03097 [Anaerostipes caccae DSM 14662]
gi|316900512|gb|EFV22494.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
Length = 256
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A++A++ + DG + + T ST + + I + V V+ + N
Sbjct: 81 KQRIAKKAVKLISDGDVVFLDT-STTNLEVAR--EIIRSKRNVTVVSCMLDIANLFAADG 137
Query: 67 IPLHSP 72
Sbjct: 138 NTGFIL 143
>gi|325660797|ref|ZP_08149425.1| hypothetical protein HMPREF0490_00157 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472871|gb|EGC76081.1| hypothetical protein HMPREF0490_00157 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 248
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
M+ + K+ A+ A + + + + G+T + + ++ A
Sbjct: 76 MNMEE-KQRIAKYAAERIEKNDFVYVDAGTTTGCLIDWICEQGA 118
>gi|320532243|ref|ZP_08033106.1| DeoR-like helix-turn-helix protein [Actinomyces sp. oral taxon 171
str. F0337]
gi|320135545|gb|EFW27630.1| DeoR-like helix-turn-helix protein [Actinomyces sp. oral taxon 171
str. F0337]
Length = 258
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 34/146 (23%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL----------------------LADKIA 44
K A+ A V G ++G+ G+T E +A ++A
Sbjct: 78 KTRIAKAAAALVHPGDSVGLNGGTTTTEVAREIALLPDLTDPDVPITLVTNAVNIASEMA 137
Query: 45 NGFRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDS--RLRLIKGY 98
V+V+ + + + V ++ L ++G DE +
Sbjct: 138 VRQCVRVVVTGGIARARSFELTGPLAGLILPSISVGTLFLGVEGLDERGPYAQHDGEAAV 197
Query: 99 GGALLREKIIAHAASRFIVIGDESKR 124
AL+ AA R +++ D SK
Sbjct: 198 NAALV------EAAQRVVIVCDSSKL 217
>gi|188535540|ref|YP_001909337.1| Transcriptional regulator, DeoR family [Erwinia tasmaniensis
Et1/99]
gi|188030582|emb|CAO98477.1| Transcriptional regulator, DeoR family [Erwinia tasmaniensis
Et1/99]
Length = 258
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
KR AR A Q ++ G T+ + GST L
Sbjct: 78 KRAVARAAAQLLLPGQTVFLDAGSTTTMLAEEL 110
>gi|148656842|ref|YP_001277047.1| DeoR family transcriptional regulator [Roseiflexus sp. RS-1]
gi|148568952|gb|ABQ91097.1| transcriptional regulator, DeoR family [Roseiflexus sp. RS-1]
Length = 260
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 28/156 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K AR A + DG T+ + ST + A +IA+ + VI + +
Sbjct: 85 EEKERIARAAALLINDGDTVMLDA-STTAYAI---ARQIADRRNLTVITNGMHLALSLGA 140
Query: 65 HHIPLHSP------EDVSSVDLSIDGFDEIDSRLRLIKGYGGA--LLREKIIAHAA---- 112
H D S+ ++ +E+ RL KG+ A L K + ++
Sbjct: 141 HPAITTIVIGGQVRGDTGSLTGTL--AEEMLQRLHADKGFFSARGLTLAKGLTESSIPEG 198
Query: 113 ----------SRFIVIGDESKRVDFLGRGMLPIEID 138
+ I + D SK P+E
Sbjct: 199 LLKAEMIRHVDQVIAVLDSSKLGVSSLTSFCPVEAI 234
>gi|254520621|ref|ZP_05132677.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
gi|226914370|gb|EEH99571.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
Length = 253
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K A+ A + + + +G+T + L +K
Sbjct: 84 KSIIAKHAASLIKKDDFVYIDSGTTTNLMIDFLEEK 119
>gi|308813421|ref|XP_003084017.1| Ribose 5-phosphate isomerase (ISS) [Ostreococcus tauri]
gi|116055899|emb|CAL57984.1| Ribose 5-phosphate isomerase (ISS) [Ostreococcus tauri]
Length = 315
Score = 38.7 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 86/258 (33%), Gaps = 50/258 (19%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF-------RVQVIPSSRNTEN 60
A RA++ + D +G+ G + LA ++ V+V+P
Sbjct: 55 EILANRALEMIEDDDVIGLSRG---EHCAE-LARRLGERRREGLAPRNVRVVPLEAIAAK 110
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEI-------DSRLRLIKGYG-----GALLREKII 108
C +H + + S ++ ++ + E + + I G + R K
Sbjct: 111 ECAVHGLEVRSIDEAPAIMKTFAQPSECALAEVNGKTSIAAIFGRETTPVQPDIARVKAA 170
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKE------VASCFGLNEEL 162
+ + +++ + V G +P+ +D + L + G N +
Sbjct: 171 LKKSLKVVLLKE---FVMDRIGGSIPLVVDAENWEEHAEELDDLFLGDAEVWRRGANFDA 227
Query: 163 RLRRNGSGLFVSDGGNYIVDAFF-----------GFIPD-----PQIISGEL-CNIPGVI 205
R + +DG + ++D F G I D P + L ++ GV
Sbjct: 228 NPRGGSNPYVSADGSHTLLDLRFEDPINGGRWECGLILDGEPCGPYELQYALENDVSGVS 287
Query: 206 EHGLFINMVDCAIIGTSD 223
HG++ D I +
Sbjct: 288 AHGIYTQ-ADAVITINPE 304
>gi|262165346|ref|ZP_06033083.1| transcriptional repressor of aga operon [Vibrio mimicus VM223]
gi|262025062|gb|EEY43730.1| transcriptional repressor of aga operon [Vibrio mimicus VM223]
Length = 262
Score = 38.7 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 29/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 79 KQMIAFAAAQLIGDGEAIILDSGSTIALMPQYLTQKKLVVMTNALNTAYQLSHNENVELH 138
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLR 104
V R + + H + L +DGFD +
Sbjct: 139 VIGGSLRRASCSLTGHHGEHQIRSYLFDKLFLGVDGFDLQAGITTPDNHEAQ-------V 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 192 NRAMCDVARQIIAVTDSSKF 211
>gi|253680816|ref|ZP_04861619.1| transcriptional regulator, DeoR family [Clostridium botulinum D
str. 1873]
gi|253562665|gb|EES92111.1| transcriptional regulator, DeoR family [Clostridium botulinum D
str. 1873]
Length = 250
Score = 38.7 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 16/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRV--QVIPSSRNTEN 60
K A+ A + + + + G+T + + + +K I NG ++I + T
Sbjct: 81 KIEIAKYAAKLIEPNDFIYIDAGTTTEFMIDFIQEKQATFITNGINHAKKLIRNGFKTYI 140
Query: 61 FCKIHH---IPLHSPEDVSSVDLS------IDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ E V S+ + R AL++EK +
Sbjct: 141 LGGEIKGITEAMVGVEAVESLKKYNFTKGFFGTNGISEERGYTTPDIKEALVKEKAL-KR 199
Query: 112 ASRFIVIGDESKR 124
+ ++ D SK
Sbjct: 200 SKDSYILADNSKF 212
>gi|309807125|ref|ZP_07701102.1| transcriptional regulator, DeoR family [Lactobacillus iners LactinV
03V1-b]
gi|309810161|ref|ZP_07704006.1| transcriptional regulator, DeoR family [Lactobacillus iners SPIN
2503V10-D]
gi|308166476|gb|EFO68678.1| transcriptional regulator, DeoR family [Lactobacillus iners LactinV
03V1-b]
gi|308169433|gb|EFO71481.1| transcriptional regulator, DeoR family [Lactobacillus iners SPIN
2503V10-D]
Length = 159
Score = 38.7 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A+ A +V DG + + G+T E + L + + V+ + + C
Sbjct: 77 EEKKQIAQAAAMHVRDGDNIFIDAGTTTYEMIQFL----RDKKDLTVVTNGIDAAIACIE 132
Query: 65 HHIPLHSP 72
I
Sbjct: 133 LGIRTKIL 140
>gi|326794905|ref|YP_004312725.1| DeoR family transcriptional regulator [Marinomonas mediterranea
MMB-1]
gi|326545669|gb|ADZ90889.1| transcriptional regulator, DeoR family [Marinomonas mediterranea
MMB-1]
Length = 249
Score = 38.7 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 20/139 (14%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV-------IPSSR 56
+Q K A A+ + D ++ +G+GST E L +I V + S
Sbjct: 73 MQGKLRIAELALSKINDYQSIFLGSGSTVAEVAKAL--EIKKELHVMTSNLHAARVLSDH 130
Query: 57 NTENFCKIHHIPLHSPEDVS-----------SVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
T +DV D+ I ID + L +
Sbjct: 131 TTGELTIAGGKIRKRDQDVIGADAVNFFQKYRADVGIFSVSAIDKQGMLFDFTDDDISAL 190
Query: 106 KIIAHAASRFIVIGDESKR 124
+++ + I++ D +K
Sbjct: 191 EVLVNNCHYRILVIDSTKF 209
>gi|314965799|gb|EFT09898.1| DeoR-like helix-turn-helix protein [Propionibacterium acnes
HL082PA2]
gi|315094483|gb|EFT66459.1| DeoR-like helix-turn-helix protein [Propionibacterium acnes
HL060PA1]
gi|327328977|gb|EGE70737.1| transcriptional regulator [Propionibacterium acnes HL103PA1]
Length = 280
Score = 38.7 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 15/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR-------------VQV 51
+ K A+ + V D M++ + GST L ++ V
Sbjct: 76 ESKTAIAQLVSRLVTDDMSVIIDNGSTMVAVAQALQERPITALCLSLRAALPLGEGGVAT 135
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVS--SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + T + + + D++I G + L L ++ I
Sbjct: 136 VSTPDGTLMPESLRYEAASCLRALGAFRADVAIIGTCSASPAMGLTVTTHQDALVKRAIL 195
Query: 110 HAASRFIVIGDESKRV 125
+++R I+ K
Sbjct: 196 ASSARVILAATSDKLS 211
>gi|254883601|ref|ZP_05256311.1| DeoR-family transcriptional regulator [Bacteroides sp. 4_3_47FAA]
gi|254836394|gb|EET16703.1| DeoR-family transcriptional regulator [Bacteroides sp. 4_3_47FAA]
Length = 251
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 22/138 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-------------------ADKIAN 45
+ K+ A++AIQ++ +G ++ + +GST E LL +
Sbjct: 77 EEKKEIAQKAIQFIQEGDSIILDSGSTTTEIAKLLMNYKDLTVITNALNIALIVGENHGI 136
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
V T + + + L+ G I S ++L L+ +
Sbjct: 137 NLIVTGGEFKAPTLSLTGKMAADSFKDIRANKLFLATAG---ISSDMKLTYPSLSDLVVK 193
Query: 106 KIIAHAASRFIVIGDESK 123
+ +AS+ ++ D SK
Sbjct: 194 SAMIESASKVYLVADCSK 211
>gi|213962759|ref|ZP_03391020.1| glucitol operon repressor [Capnocytophaga sputigena Capno]
gi|213954754|gb|EEB66075.1| glucitol operon repressor [Capnocytophaga sputigena Capno]
Length = 254
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 26/153 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI-PSSRNTENFCK 63
+ K +A+ ++ + + + +G+T LA K+ + V+ PS R CK
Sbjct: 78 EEKTRIITKALDFIKENEFIILSSGTTVNL----LAQKLYGFRNLTVLTPSLRVALEVCK 133
Query: 64 IHHIPLHSP------EDVSSVDL-------------SIDGFDEIDSRLRLIKGY-GGALL 103
++ S++ + G + ID L G A L
Sbjct: 134 NPNVNTIHLGGEVRKNSTSTIGVLAEETLSNFSCTTLFLGIEGIDLDYGLSSTNVGEAHL 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+K++ + IV+ D SK + +E
Sbjct: 194 NKKMMERV-DKTIVLADSSKIHKRGFGFICYVE 225
>gi|167626191|ref|YP_001676485.1| DeoR family transcriptional regulator [Shewanella halifaxensis
HAW-EB4]
gi|167356213|gb|ABZ78826.1| transcriptional regulator, DeoR family [Shewanella halifaxensis
HAW-EB4]
Length = 256
Score = 38.7 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 20/146 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + A+ A Q + D + + +GST + L +K + + +
Sbjct: 78 KLSIAKAAAQLIKDHNRIIIDSGSTTSGLIGELNNKRGLLVMTNSLALANSIHELENEPT 137
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLR-EKII 108
+ + + G D ID L K++
Sbjct: 138 LLMTGGTWDPHSESFQGQIAEQVLRSYNFDQLFIGADGIDLERGTTT--FNELTGLSKVM 195
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLP 134
A + +V+ + K + LP
Sbjct: 196 AEVSREVVVMLESEKLGRRIPNLELP 221
>gi|241666626|ref|YP_002984710.1| transcriptional regulator, DeoR family [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862083|gb|ACS59748.1| transcriptional regulator, DeoR family [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 270
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMI--------------LLADK-IANGFRV 49
KR AR+A++ G + + G+T + + +A+ + +
Sbjct: 81 DKKRAIARQAVELCDPGDAIIINGGTTTFQMVHFMAAHRLQVMTNSFAIAEHLVKHSKNT 140
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+P I + G I L +++ + E+ +
Sbjct: 141 VTVPGGAIYREQSLILSPFDNDAIRNFYARRFFIGAQGIGP-LGIMEADALIIQSEQKLM 199
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
H A +V+ D SK + P+E
Sbjct: 200 HQADELVVMADSSKFHRRSSLILCPLE 226
>gi|313900615|ref|ZP_07834108.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
gi|312954677|gb|EFR36352.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
Length = 249
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+ K+ AR A + + + GST + L +
Sbjct: 79 EEKKRIARYAASLIQAHDFVYIDAGSTTLHMVEYLKE 115
>gi|283836320|ref|ZP_06356061.1| glucitol operon repressor [Citrobacter youngae ATCC 29220]
gi|291067684|gb|EFE05793.1| glucitol operon repressor [Citrobacter youngae ATCC 29220]
Length = 269
Score = 38.7 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 30/141 (21%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------------ 54
KR+ AR A + + G + + +G+T +A + V + +
Sbjct: 93 KRSIARAAAELIKPGHRVILDSGTTTY----EIARLMRQHTNVIAMTNGMNVANALLEAE 148
Query: 55 -----------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
R +++F + L +D D R A L
Sbjct: 149 GVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEARL 206
Query: 104 REKIIAHAASRFIVIGDESKR 124
++ A R IV+ D +K
Sbjct: 207 NRRMCE-VAERIIVVTDSTKF 226
>gi|300715357|ref|YP_003740160.1| transcriptional regulator, DeoR-type [Erwinia billingiae Eb661]
gi|299061193|emb|CAX58301.1| transcriptional regulator, DeoR-type [Erwinia billingiae Eb661]
Length = 254
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 17/134 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGST----AKEFMILLADKIANGFRVQVIPSSRNTENFC 62
K+ A+ A V G ++ + G+T A+ L I + + + S
Sbjct: 79 KQAIAQAAASLVKSGDSVVLDAGTTMLELARHLTHLQLRVITSDLHIALFLSEFKQIEVT 138
Query: 63 KIHHIPLHSPEDV-----SSV--DLSIDGFDEIDSRLRLIKGYGGALLREKI-----IAH 110
I S + + ++ D + ++ EK +
Sbjct: 139 IIGGRIDDSSQSCVGDHGRRLLKNIYPDVA-FVSCNSWSMEKGITTPTEEKAGLKEDLLG 197
Query: 111 AASRFIVIGDESKR 124
A R +++ D SK
Sbjct: 198 NARRRVLLADSSKY 211
>gi|261210770|ref|ZP_05925062.1| transcriptional repressor of aga operon [Vibrio sp. RC341]
gi|260840255|gb|EEX66835.1| transcriptional repressor of aga operon [Vibrio sp. RC341]
Length = 263
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 29/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 80 KQMIAFAAAQLISDGEAIILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNDNVELH 139
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLR 104
V R + + H + L +DGFD +
Sbjct: 140 VIGGSLRRASCSLTGHHGEQQIRSYLFDKLFLGVDGFDLQAGITTPDNHEAQ-------V 192
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 193 NRAMCDVARQVIAVTDSSKF 212
>gi|326773612|ref|ZP_08232895.1| transcriptional regulator, DeoR family [Actinomyces viscosus C505]
gi|326636842|gb|EGE37745.1| transcriptional regulator, DeoR family [Actinomyces viscosus C505]
Length = 258
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 30/154 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL----------------------LADKIA 44
K A+ A V G ++G+ G+T E +A+++A
Sbjct: 78 KTRIAKAAAALVHPGDSVGLNGGTTTTEVAREIALLPALTDPEVPVTLVTNAVNIANEMA 137
Query: 45 NGFRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGG 100
V+V+ + + + V ++ L ++G DE + G
Sbjct: 138 VRQCVRVVVTGGIARARSFELTGPLASLILPSISVGTLFLGVEGLDE----RGAYAQHDG 193
Query: 101 ALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ AA +++ D SK + P
Sbjct: 194 EAAINAALVEAAEHVVIVCDSSKLGSTAFALICP 227
>gi|116255615|ref|YP_771448.1| DeoR family transcriptional regulator [Rhizobium leguminosarum bv.
viciae 3841]
gi|115260263|emb|CAK03367.1| Rhamnose operon regulator, DeoR family [Rhizobium leguminosarum bv.
viciae 3841]
Length = 270
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMI--------------LLADK-IANGFRV 49
KR AR+A++ G + + G+T + + +A+ + +
Sbjct: 81 DKKRAIARQAVELCDPGDAIIINGGTTTFQMVHFMAAHRLQVMTNSFAIAEHLVKHSKNT 140
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+P I + G I L +++ + E+ +
Sbjct: 141 VTVPGGAIYREQSLILSPFDNDAIRNFYARRFFIGAQGIGP-LGIMEADALIIQSEQKLM 199
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
H A +V+ D SK + P+E
Sbjct: 200 HQADELVVMADSSKFHRRSSLILCPLE 226
>gi|94986271|ref|YP_605635.1| DeoR family transcriptional regulator [Deinococcus geothermalis DSM
11300]
gi|94556552|gb|ABF46466.1| transcriptional regulator, DeoR family [Deinococcus geothermalis
DSM 11300]
Length = 270
Score = 38.7 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 18/136 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCKIH 65
K A A+ + G T+ + G+TA+ L A ++V+ +
Sbjct: 79 KARLAEAALTLLRPGQTVYLDAGTTARHVAEALRRLPALTRTLRVVTHAIDVAYELNGEC 138
Query: 66 HIPLHSPEDVSSV-----------------DLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + E S D+ + G ID L ++ I
Sbjct: 139 PLYVVGGEVYGSTYSLTGPDALATVERYAYDVFLVGCTSIDPERGLTNSNLIEAQQKAAI 198
Query: 109 AHAASRFIVIGDESKR 124
A R I+I D SK
Sbjct: 199 LRRARRSILIADHSKW 214
>gi|262283178|ref|ZP_06060945.1| lactose phosphotransferase system repressor [Streptococcus sp.
2_1_36FAA]
gi|262261430|gb|EEY80129.1| lactose phosphotransferase system repressor [Streptococcus sp.
2_1_36FAA]
Length = 248
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
M + K A++ + G T+ +G+G+T L DK
Sbjct: 73 MINTEEKEAIAKKCADLISSGDTIFIGSGTTTALIGDFLDDK 114
>gi|282865104|ref|ZP_06274157.1| transcriptional regulator, DeoR family [Streptomyces sp. ACTE]
gi|282560027|gb|EFB65576.1| transcriptional regulator, DeoR family [Streptomyces sp. ACTE]
Length = 259
Score = 38.7 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK--IANGFRVQVIPSSR 56
KR AR + G +G+ G+T E LA + A G + ++
Sbjct: 78 KRRIARAVADLIPSGCMVGLNGGTTTSEVARELAVRPEPAAGGHALTVVTNA 129
>gi|260773581|ref|ZP_05882497.1| transcriptional regulator of GlmS, DeoR family [Vibrio
metschnikovii CIP 69.14]
gi|260612720|gb|EEX37923.1| transcriptional regulator of GlmS, DeoR family [Vibrio
metschnikovii CIP 69.14]
Length = 268
Score = 38.7 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K A++A + + D + + +GST + L DK +AN ++ P+
Sbjct: 94 KVALAKQAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPT 153
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + G + K
Sbjct: 154 LLMTGGTWDTHSESFQGQVAESVLRSYDFDQLFIGADGVDLERGTTTFNELTGLS----K 209
Query: 107 IIAHAASRFIVIGDESK 123
++A + IV+ + K
Sbjct: 210 VMAEVSREVIVMIESEK 226
>gi|167854899|ref|ZP_02477675.1| predicted transcriptional regulator of sugar metabolism
[Haemophilus parasuis 29755]
gi|167853966|gb|EDS25204.1| predicted transcriptional regulator of sugar metabolism
[Haemophilus parasuis 29755]
Length = 252
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 42/144 (29%), Gaps = 26/144 (18%)
Query: 2 DALQM---KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------ANGF 47
Q+ K A A + D + + +GST + L
Sbjct: 70 SQEQLSKQKLAIASAAANQIRDHNRIIIDSGSTTGTLVKALHHSGLVVMTNSLALANELI 129
Query: 48 RVQVIPS--------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYG 99
++ P+ +E+F + D + + DG D + G
Sbjct: 130 ALECEPTVLMTGGTWDARSESFQGKVAANVLRSYDFDQLFIGADGLDLTRGTTTFNELIG 189
Query: 100 GALLREKIIAHAASRFIVIGDESK 123
+ + +A + IV+ + K
Sbjct: 190 LSQV----MAEVSREVIVMIESQK 209
>gi|298247133|ref|ZP_06970938.1| transcriptional regulator, DeoR family [Ktedonobacter racemifer DSM
44963]
gi|297549792|gb|EFH83658.1| transcriptional regulator, DeoR family [Ktedonobacter racemifer DSM
44963]
Length = 273
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 45/154 (29%), Gaps = 19/154 (12%)
Query: 1 MD-ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-------------ADKIANG 46
M ++ K A+ A+ + G T+ + G+T + A IA
Sbjct: 90 MSRQVEEKTRIAQAALHLIQPGDTIALSPGTTTTYLARAIRHTQIQPLTVVTNAVNIAME 149
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSV-----DLSIDGFDEIDSRLRLIKGYGGA 101
+ T L P S+ + + G + L
Sbjct: 150 LAGTKGITLTLTGGLQLDEFFALVGPLAEQSLSQIYVEKAFLGVTGLHPVYGLTGPNQLE 209
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
L ++ A + I++ D +K + PI
Sbjct: 210 TLTHRLTMQRAQQTIILADHTKIGKVALHSITPI 243
>gi|296877200|ref|ZP_06901240.1| DeoR family transcriptional regulator [Streptococcus parasanguinis
ATCC 15912]
gi|296431720|gb|EFH17527.1| DeoR family transcriptional regulator [Streptococcus parasanguinis
ATCC 15912]
Length = 247
Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 30/166 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A+ A + V D T+ + +GST + N V+++ +S +F + +
Sbjct: 72 KRKIAQEAAKLVQDNETILIESGSTCALLAEEICQTKKN---VKIVTNSYFIADFVRNYD 128
Query: 67 IPLHSP----------EDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK--------- 106
V + + + + GY AL K
Sbjct: 129 SCKIILLGGEFQKDSQVTVGPLLKQLIQSFRVKNAFIGADGYDDALGFTGKDMMRSEVVQ 188
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEV 152
++ + +++ D SK + F +++ + +
Sbjct: 189 YMSQVSENIVILTDSSKFQKKGN-------VRNFALSQVQRVITDK 227
>gi|186473854|ref|YP_001861196.1| DeoR family transcriptional regulator [Burkholderia phymatum
STM815]
gi|184196186|gb|ACC74150.1| transcriptional regulator, DeoR family [Burkholderia phymatum
STM815]
Length = 251
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RA Q V DG ++ + +GST L D+
Sbjct: 76 AKRAIGERAAQLVPDGASVIIDSGSTTHAVARALTDRHR 114
>gi|323188850|gb|EFZ74135.1| hypothetical protein ECRN5871_3273 [Escherichia coli RN587/1]
Length = 243
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 64 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLIHMEPLTVVTNDFVIADYLLD 120
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 121 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 180
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 181 RAIASASRQRVLVCDATKYGQVATWLALPL 210
>gi|310826956|ref|YP_003959313.1| hypothetical protein ELI_1364 [Eubacterium limosum KIST612]
gi|308738690|gb|ADO36350.1| hypothetical protein ELI_1364 [Eubacterium limosum KIST612]
Length = 254
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 43/141 (30%), Gaps = 26/141 (18%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--ADKI---------------ANGF 47
+ K ARRA + DG + + +G+T L + ++
Sbjct: 78 EHKERIARRAAAMISDGQKIFLSSGTTVFTLARQLDNSRRLLIVTDGLNTALELSKRTNI 137
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVS----SVDLSIDGFDEIDSRLRLIKGYGGALL 103
+ +I + + + ++ G D L++
Sbjct: 138 SIIIIGGELRSNTLATTGSFAEGMIREFKFETAYIGVTSIGTDGSLHHGSLVEIGLY--- 194
Query: 104 REKIIAHAASRFIVIGDESKR 124
K++A + + +++ D K
Sbjct: 195 --KVLAEISKKLVIMADSDKL 213
>gi|331684350|ref|ZP_08384942.1| regulatory protein, DeoR family [Escherichia coli H299]
gi|331077965|gb|EGI49171.1| regulatory protein, DeoR family [Escherichia coli H299]
Length = 255
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 76 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLIHMEPLTVVTNDFVIADYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSMRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|306832666|ref|ZP_07465804.1| lactose PTS family porter repressor [Streptococcus bovis ATCC
700338]
gi|304425180|gb|EFM28308.1| lactose PTS family porter repressor [Streptococcus bovis ATCC
700338]
Length = 256
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++ KR A+ A Q V +G T+ +G G+T + F L K
Sbjct: 79 QIEEKRAIAKFASQLVQEGETIFIGPGTTLEHFASELVAK 118
>gi|288904397|ref|YP_003429618.1| PTS system, lactose-specific, repressor [Streptococcus gallolyticus
UCN34]
gi|306830429|ref|ZP_07463599.1| lactose PTS family porter repressor [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325977394|ref|YP_004287110.1| HTH-type transcriptional regulator [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|288731122|emb|CBI12668.1| Putative PTS system, lactose-specific, repressor [Streptococcus
gallolyticus UCN34]
gi|304427454|gb|EFM30556.1| lactose PTS family porter repressor [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325177322|emb|CBZ47366.1| Uncharacterized HTH-type transcriptional regulator HI1009
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 256
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++ KR A+ A Q V +G T+ +G G+T + F L K
Sbjct: 79 QIEEKRAIAKFASQLVQEGETIFIGPGTTLEHFASELVAK 118
>gi|295835142|ref|ZP_06822075.1| DeoR family transcriptional regulator [Streptomyces sp. SPB74]
gi|197697847|gb|EDY44780.1| DeoR family transcriptional regulator [Streptomyces sp. SPB74]
Length = 270
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 28/154 (18%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS---------- 55
K N AR A + V G + + G+T LA ++ + V+ +S
Sbjct: 85 AKENIARVAAELVAPGTAIALSGGTTTY----ALAQRLVEVPELTVVTNSVRVAEVFHRA 140
Query: 56 ------RNTENFCKIHHIPLHSP-EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR---- 104
R T P S V+ ++ FD + + I G G
Sbjct: 141 HEGRQGRATVVLTGGVRTPSDSLVGPVADAAIASLHFDLLFLGVHGISGRAGLSTPNLAE 200
Query: 105 ---EKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ + AA R IV+ D +K P+
Sbjct: 201 AETNRRLVAAARRVIVVADHTKWGTVGLSSFAPL 234
>gi|91212098|ref|YP_542084.1| transcriptional regulator YgbI [Escherichia coli UTI89]
gi|117624968|ref|YP_853956.1| putative transcriptional regulator YgbI [Escherichia coli APEC O1]
gi|215488052|ref|YP_002330483.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O127:H6 str. E2348/69]
gi|218559726|ref|YP_002392639.1| DNA-binding transcriptional regulator [Escherichia coli S88]
gi|218690860|ref|YP_002399072.1| putative DNA-binding transcriptional regulator [Escherichia coli
ED1a]
gi|237706639|ref|ZP_04537120.1| transcriptional regulator YgbI [Escherichia sp. 3_2_53FAA]
gi|331648455|ref|ZP_08349543.1| regulatory protein, DeoR family [Escherichia coli M605]
gi|91073672|gb|ABE08553.1| hypothetical transcriptional regulator YgbI [Escherichia coli
UTI89]
gi|115514092|gb|ABJ02167.1| putative transcriptional regulator YgbI [Escherichia coli APEC O1]
gi|215266124|emb|CAS10549.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O127:H6 str. E2348/69]
gi|218366495|emb|CAR04247.1| putative DNA-binding transcriptional regulator [Escherichia coli
S88]
gi|218428424|emb|CAR09204.1| putative DNA-binding transcriptional regulator [Escherichia coli
ED1a]
gi|222034430|emb|CAP77172.1| Uncharacterized HTH-type transcriptional regulator [Escherichia
coli LF82]
gi|226899679|gb|EEH85938.1| transcriptional regulator YgbI [Escherichia sp. 3_2_53FAA]
gi|315289266|gb|EFU48661.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 110-3]
gi|324005699|gb|EGB74918.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 57-2]
gi|331042202|gb|EGI14344.1| regulatory protein, DeoR family [Escherichia coli M605]
Length = 265
Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 86 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLIHMEPLTVVTNDFVIADYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|167748417|ref|ZP_02420544.1| hypothetical protein ANACAC_03161 [Anaerostipes caccae DSM 14662]
gi|167652409|gb|EDR96538.1| hypothetical protein ANACAC_03161 [Anaerostipes caccae DSM 14662]
Length = 253
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 15/133 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+K RA++++ DG + + +GST +L+ K + ++ +
Sbjct: 80 LKEKLCERAMEFIGDGNVIFLDSGSTIFCLAGMLSKKSGYTIVTTSLEAAYALVHSSNKV 139
Query: 66 HIPLHSPEDVSS---------------VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ S VD++ G + + ++ I
Sbjct: 140 ILTGGMLNPNSMAAEGFQATSLINSLKVDIAFLGTNGFEQHKGPAVSDFQDAQTKQAIIP 199
Query: 111 AASRFIVIGDESK 123
A +VI D SK
Sbjct: 200 NARTNVVIADSSK 212
>gi|152996587|ref|YP_001341422.1| amino acid adenylation domain-containing protein [Marinomonas sp.
MWYL1]
gi|150837511|gb|ABR71487.1| amino acid adenylation domain [Marinomonas sp. MWYL1]
Length = 3114
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Query: 32 AKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSR 91
+ F+ L + IP S + ++ L+ ++ +D ++
Sbjct: 2455 VEYFLDYLYQLVTLNALSSRIPESEYNKQLMELSGENLNREPSFETLHEILDSRAHLNPD 2514
Query: 92 LRLIKGYGGALLREKIIAHAASRFIVIGDE-SKRVDFLGRGMLPIEI 137
IK +L ++ ++ I E K + +PI +
Sbjct: 2515 KIAIKCGDNSLTYGELNQKSSRLACYIQSEYRKATGAMLSSDVPIPV 2561
>gi|157372084|ref|YP_001480073.1| DeoR family transcriptional regulator [Serratia proteamaculans 568]
gi|157323848|gb|ABV42945.1| transcriptional regulator, DeoR family [Serratia proteamaculans
568]
Length = 257
Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 44/137 (32%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--------- 52
K A A YV DG L + +GST + + L + + N +
Sbjct: 81 KSQIASVAASYVRDGDALILDSGSTTTQIVPFLKGRRDLVVMTNALNIAYELSGNDGVEV 140
Query: 53 -----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RN+ + + L +DGFD + G A L ++
Sbjct: 141 MVLGGSVRRNSYSLYGPAAEQQLRQYRFDKLFLGVDGFDLVAG--ITTPHPGEAHLN-RV 197
Query: 108 IAHAASRFIVIGDESKR 124
+ A I + D SK
Sbjct: 198 MCEVAREIIAVADASKF 214
>gi|282853073|ref|ZP_06262410.1| transcriptional regulator, DeoR family [Propionibacterium acnes
J139]
gi|282582526|gb|EFB87906.1| transcriptional regulator, DeoR family [Propionibacterium acnes
J139]
gi|314922714|gb|EFS86545.1| DeoR-like helix-turn-helix protein [Propionibacterium acnes
HL001PA1]
gi|314982942|gb|EFT27034.1| DeoR-like helix-turn-helix protein [Propionibacterium acnes
HL110PA3]
gi|315091247|gb|EFT63223.1| DeoR-like helix-turn-helix protein [Propionibacterium acnes
HL110PA4]
gi|315105202|gb|EFT77178.1| DeoR-like helix-turn-helix protein [Propionibacterium acnes
HL050PA2]
Length = 252
Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 15/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFR-------------VQV 51
+ K A+ + V D M++ + GST L ++ V
Sbjct: 76 ESKTAIAQLVSRLVTDDMSVIIDNGSTMVAVAQALQERPITALCLSLRAALPLGEGGVAT 135
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVS--SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + T + + + D++I G + L L ++ I
Sbjct: 136 VSTPDGTLMPESLRYEAASCLRALGAFRADVAIIGTCSASPAMGLTVTTHQDALVKRAIL 195
Query: 110 HAASRFIVIGDESKRV 125
+++R I+ K
Sbjct: 196 ASSARVILAATSDKLS 211
>gi|293395349|ref|ZP_06639633.1| glucitol operon repressor [Serratia odorifera DSM 4582]
gi|291422033|gb|EFE95278.1| glucitol operon repressor [Serratia odorifera DSM 4582]
Length = 267
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 30/141 (21%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------------ 54
K+ AR+A + VV G ++ + +G+T +A ++ + + V+ +
Sbjct: 90 KQRIARKAAEMVVTGSSIILDSGTTTY----EIAQQLRDKKEIIVMTNGMNVANALLDAT 145
Query: 55 -----------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
R++++F + L +DG S+ A L
Sbjct: 146 EVELLVTGGHLRRSSQSFYGSQAELSLDNYHFDMLFLGVDGL--SLSQGVTTHQENEARL 203
Query: 104 REKIIAHAASRFIVIGDESKR 124
++ + R I + D SK
Sbjct: 204 NRRMCE-VSKRIIAVADSSKF 223
>gi|257784129|ref|YP_003179346.1| transcriptional regulator, DeoR family [Atopobium parvulum DSM
20469]
gi|257472636|gb|ACV50755.1| transcriptional regulator, DeoR family [Atopobium parvulum DSM
20469]
Length = 254
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ + K A+ A + + DG T+ + T STA + + +
Sbjct: 74 NQVTAKFKLAQAAAKLIKDGDTVFINTSSTAIKVLEFI 111
>gi|51893436|ref|YP_076127.1| DeoR family transcriptional regulator [Symbiobacterium thermophilum
IAM 14863]
gi|51857125|dbj|BAD41283.1| DeoR-family transcriptional regulator [Symbiobacterium thermophilum
IAM 14863]
Length = 256
Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 44/149 (29%), Gaps = 20/149 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF--- 61
+ K AR A V DG + + GST L + G V + E
Sbjct: 80 EEKERIARAAADLVQDGDVVLLDAGSTTLAISRCL--RGRKGLTVITVDLKIALELCDEP 137
Query: 62 --------CKIHHIPLHSPEDVSS-------VDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ V+++ G +D L + ++
Sbjct: 138 GIEVIVTGGTAMPEIYSLLGPVAEQFLRGLTVNIAFLGSSAVDVDFGLTTPTLSKVPLKR 197
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ AA +++ D SK + P+
Sbjct: 198 AMIGAAQHAVLVADSSKFNRRATYQICPL 226
>gi|320106668|ref|YP_004182258.1| DeoR family transcriptional regulator [Terriglobus saanensis
SP1PR4]
gi|319925189|gb|ADV82264.1| transcriptional regulator, DeoR family [Terriglobus saanensis
SP1PR4]
Length = 267
Score = 38.3 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 54/151 (35%), Gaps = 23/151 (15%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN----- 57
LQ K+ A A++ V +G + + +G+T +A + ++ V+ ++ N
Sbjct: 90 QLQEKQRIASAAVKLVEEGQCVLLDSGTTTT----AIARALRGFSKLTVVTNAVNIAAEL 145
Query: 58 ---------TENFCKIHHIPLHSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGALL 103
T + + L P+ + + G D D R+ +
Sbjct: 146 TGTNFDVILTGGMLRKNSFSLVGPQAEDVLREINADILFLGVDGFDPRIGVTTPNVLESR 205
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ + AA + + + D +K ++P
Sbjct: 206 VNRAMVKAARKIVAVCDSTKFTHRSFALIVP 236
>gi|312965006|ref|ZP_07779246.1| uncharacterized HTH-type transcriptional regulator ygbI
[Escherichia coli 2362-75]
gi|281179739|dbj|BAI56069.1| putative transcriptional regulator [Escherichia coli SE15]
gi|307625691|gb|ADN69995.1| putative DNA-binding transcriptional regulator [Escherichia coli
UM146]
gi|312290562|gb|EFR18442.1| uncharacterized HTH-type transcriptional regulator ygbI
[Escherichia coli 2362-75]
gi|312947265|gb|ADR28092.1| putative DNA-binding transcriptional regulator [Escherichia coli
O83:H1 str. NRG 857C]
gi|323951045|gb|EGB46921.1| deoR family protein regulatory protein [Escherichia coli H252]
gi|323957052|gb|EGB52777.1| deoR family protein regulatory protein [Escherichia coli H263]
gi|330908768|gb|EGH37282.1| putative transcriptional regulator YgbI, DeoR family [Escherichia
coli AA86]
Length = 255
Score = 38.3 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 76 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLIHMEPLTVVTNDFVIADYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|256820707|ref|YP_003141986.1| transcriptional regulator, DeoR family [Capnocytophaga ochracea DSM
7271]
gi|256582290|gb|ACU93425.1| transcriptional regulator, DeoR family [Capnocytophaga ochracea DSM
7271]
Length = 254
Score = 38.3 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 26/153 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI-PSSRNTENFCK 63
+ K +A+ ++ + + + +G+TA LA KI + V+ PS R CK
Sbjct: 78 EEKTRIITKALDFIKENEFIILSSGTTANL----LAQKIYGIRNLTVLTPSLRVALEVCK 133
Query: 64 IHHIPLHSP------EDVSSVDL-------------SIDGFDEIDSRLRLIKGY-GGALL 103
+ S++ + G + ID L G A L
Sbjct: 134 NPSVNTIHLGGEVRKNSTSTIGVLAEETLSNFSCTTLFLGVEGIDLDYGLSSTNVGEAHL 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K++ + IV+ D SK + +E
Sbjct: 194 NRKMMERV-DKTIVLADSSKIHKRGFGFICYVE 225
>gi|255533291|ref|YP_003093663.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
gi|255346275|gb|ACU05601.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
Length = 249
Score = 38.3 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTL---GMGTGSTAKEFMILLADKIA---------------NGFR 48
KR A + ++ + + M + G G+T EF ++ + + +
Sbjct: 77 KRAIAEKTLKIIKNDMVILTEG---GTTILEFAKMIPESLKVTFFTISPQVAITLSDHHN 133
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVS-SVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
++VI +H + V VDL + G + + L + +K
Sbjct: 134 LEVITIGGKLNKNANLHIGASVINQLVDIKVDLCLLGANAFSAEEGLTDMDWDIVQVKKA 193
Query: 108 IAHAASRFIVIGDESKR 124
I A+ R V+ K
Sbjct: 194 IIRASKRTAVLSISEKL 210
>gi|91227130|ref|ZP_01261614.1| transcriptional regulator, DeoR family protein [Vibrio
alginolyticus 12G01]
gi|269964644|ref|ZP_06178882.1| transcriptional regulator, DeoR family [Vibrio alginolyticus 40B]
gi|91188782|gb|EAS75069.1| transcriptional regulator, DeoR family protein [Vibrio
alginolyticus 12G01]
gi|269830543|gb|EEZ84764.1| transcriptional regulator, DeoR family [Vibrio alginolyticus 40B]
Length = 253
Score = 38.3 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + D + + +GST + L DK +AN ++ P+
Sbjct: 79 KLSLAKAAASLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESK 123
++A A+ IV+ + K
Sbjct: 195 VMAEASREVIVMIESEK 211
>gi|315645082|ref|ZP_07898208.1| transcriptional regulator, DeoR family protein [Paenibacillus
vortex V453]
gi|315279503|gb|EFU42808.1| transcriptional regulator, DeoR family protein [Paenibacillus
vortex V453]
Length = 230
Score = 38.3 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 15/106 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + A V DG + + +G+T +A + + + VI + N
Sbjct: 79 KIRIGQLAASLVEDGENIIIDSGTTTLH----IATHLVHRSDITVITNDMN--------- 125
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
D + + + G E+ ++ G + + + A
Sbjct: 126 -VAVELRDAPGIKVILTGG-ELYPSSYMLNGMFTDHVLKSLHVEKA 169
>gi|254419107|ref|ZP_05032831.1| transcriptional regulator, DeoR family [Brevundimonas sp. BAL3]
gi|196185284|gb|EDX80260.1| transcriptional regulator, DeoR family [Brevundimonas sp. BAL3]
Length = 266
Score = 38.3 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 22/141 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A++A V +GMTL + +G+T LA + E
Sbjct: 87 ESKQKIAQKAAGLVTEGMTLLLDSGTTCHWLARALAS--VRNLTIVTNSVEIAHEVLGNP 144
Query: 65 HHIPLHSPEDVSSVDLSIDGFDE------IDSRLRLIKGY-------------GGALLRE 105
L + V+ V + G + L ++ A ++
Sbjct: 145 GQRLLLAGGQVNPVHNAAFGPEAKSFCRRFAPDLTILSMGAVDADRGFLDFDADEASFKQ 204
Query: 106 KIIAHAASRFIVIGDESKRVD 126
++ A R +V+ D +K
Sbjct: 205 SLLEQ-ARRIVVLADHTKFAK 224
>gi|260904747|ref|ZP_05913069.1| DeoR family transcriptional regulator [Brevibacterium linens BL2]
Length = 252
Score = 38.3 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K AR A ++V G + +G G+T + L+ +
Sbjct: 78 KSAIARAAAKHVRTGDVVALGPGTTTELLAKELSGR 113
>gi|116629155|ref|YP_814327.1| lactose transport regulator [Lactobacillus gasseri ATCC 33323]
gi|238853091|ref|ZP_04643482.1| lactose phosphotransferase system repressor [Lactobacillus gasseri
202-4]
gi|282851081|ref|ZP_06260455.1| transcriptional regulator, DeoR family [Lactobacillus gasseri
224-1]
gi|311111067|ref|ZP_07712464.1| lactose phosphotransferase system repressor [Lactobacillus gasseri
MV-22]
gi|116094737|gb|ABJ59889.1| lactose transport regulator [Lactobacillus gasseri ATCC 33323]
gi|238834266|gb|EEQ26512.1| lactose phosphotransferase system repressor [Lactobacillus gasseri
202-4]
gi|282558033|gb|EFB63621.1| transcriptional regulator, DeoR family [Lactobacillus gasseri
224-1]
gi|311066221|gb|EFQ46561.1| lactose phosphotransferase system repressor [Lactobacillus gasseri
MV-22]
Length = 254
Score = 38.3 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ AA A + V DG T+ +G G+T + + L +
Sbjct: 80 KQAAAEVASKIVQDGETIYVGPGTTLEFMVAKLNQR 115
>gi|237739840|ref|ZP_04570321.1| transcriptional regulator [Fusobacterium sp. 2_1_31]
gi|229423448|gb|EEO38495.1| transcriptional regulator [Fusobacterium sp. 2_1_31]
Length = 245
Score = 38.3 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 17/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA---------------DKIANGFRVQV 51
K+ A+ A Q++ DG + + G+T E + + IAN +
Sbjct: 78 KKKIAQMAAQFISDGDYIYLDAGTTTYEIIDYIKGKDIKVVTNGIIHLERLIANDIETYL 137
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
I + L + D + G + I+ AL +K
Sbjct: 138 IGGRIKKSTLAIVGVKALRDLSEF-RFDKAFIGINGINENGYSTHDVEEAL-IKKQAIEN 195
Query: 112 ASRFIVIGDESKR 124
+++ ++ D +K
Sbjct: 196 SNKAFILADSTKF 208
>gi|223984046|ref|ZP_03634202.1| hypothetical protein HOLDEFILI_01494 [Holdemania filiformis DSM
12042]
gi|223963965|gb|EEF68321.1| hypothetical protein HOLDEFILI_01494 [Holdemania filiformis DSM
12042]
Length = 250
Score = 38.3 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K + A + V DG + + +GSTA + L +
Sbjct: 80 AKARIGQLAARQVQDGDVIFVDSGSTAYTMIPYLHQQ 116
>gi|167037018|ref|YP_001664596.1| DeoR family transcriptional regulator [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115437|ref|YP_004185596.1| regulatory protein DeoR [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166855852|gb|ABY94260.1| transcriptional regulator, DeoR family [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928528|gb|ADV79213.1| regulatory protein DeoR [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 251
Score = 38.3 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K+ A +A+ V +G + + GST +A + N + V+
Sbjct: 76 EEKQKIAAKAVGEVKEGDVIFLDAGSTTYH----IARLLKNFNNITVVT 120
>gi|262283103|ref|ZP_06060870.1| lactose phosphotransferase system repressor [Streptococcus sp.
2_1_36FAA]
gi|262261355|gb|EEY80054.1| lactose phosphotransferase system repressor [Streptococcus sp.
2_1_36FAA]
Length = 251
Score = 38.3 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 26/141 (18%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A+Q + +G T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVQLIEEGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFNDLLKK 133
Query: 65 HHIPLHSPEDVSSV-----------------DLSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + A
Sbjct: 134 KSDTFKVFLLGGEMRDATQAFVGEMTNALMDRMYFSKMFFSGNGIKDGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKR 124
+K+ + ++ D SK
Sbjct: 194 -QKLALERSKESYLLIDSSKV 213
>gi|260461640|ref|ZP_05809887.1| transcriptional regulator, DeoR family [Mesorhizobium opportunistum
WSM2075]
gi|259032710|gb|EEW33974.1| transcriptional regulator, DeoR family [Mesorhizobium opportunistum
WSM2075]
Length = 260
Score = 38.3 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 11/142 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A V DG + + GST + LA++ + + ++ +++
Sbjct: 82 EAKRQIAAVAATMVRDGDAVIVHGGSTCFHLGVKLAERNIRLYTNSMPLAAYLSDHGHCS 141
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLI--KGYGGALLREKI---------IAHAAS 113
+ + S + + +G L E ++ A
Sbjct: 142 LTVAGGELHREPGIIHSPTQATPFYASKFFLGAQGLNQEGLLESHPLLVRSIVDLSLCAD 201
Query: 114 RFIVIGDESKRVDFLGRGMLPI 135
+ +V+ D K LP+
Sbjct: 202 QIVVLADSRKLSIHARNVSLPL 223
>gi|160938590|ref|ZP_02085942.1| hypothetical protein CLOBOL_03485 [Clostridium bolteae ATCC
BAA-613]
gi|158438289|gb|EDP16048.1| hypothetical protein CLOBOL_03485 [Clostridium bolteae ATCC
BAA-613]
Length = 263
Score = 38.3 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 29/143 (20%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A A++++ +G ++ + +G+TA LA I FR + ++ + ++
Sbjct: 84 ESKVEIAEFAVRFIKEGQSIALDSGTTAY----ELARVIKRTFRSLTVVTN-SIAILNEL 138
Query: 65 HHIPLHSPEDVSSV-----------------------DLSIDGFDEIDSRLRLIKGYGGA 101
+ V + R +
Sbjct: 139 ADAKGITLIATGGVYRPEEMAFVSDIAGMIFSKLSINTFFLTTCGISVDRGITYQRMDEI 198
Query: 102 LLREKIIAHAASRFIVIGDESKR 124
+++EK++ A+ + IVI D +K
Sbjct: 199 IVQEKMME-ASDQTIVIADSTKL 220
>gi|170700118|ref|ZP_02891139.1| transcriptional regulator, DeoR family [Burkholderia ambifaria
IOP40-10]
gi|170134986|gb|EDT03293.1| transcriptional regulator, DeoR family [Burkholderia ambifaria
IOP40-10]
Length = 252
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
+ KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 75 EAKRTIGRRAAEFVPDDASVLIDSGSTPHAVALALADRHRLSIYTNDWRTAFVLARRNGN 134
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I A
Sbjct: 135 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITIDGDCTDYSRLAAEVRSR 193
Query: 108 IAHAASRFIVIGDESKR 124
+ AA +++ D SK
Sbjct: 194 MIAAAGTAVIVADHSKF 210
>gi|170718719|ref|YP_001783909.1| DeoR family transcriptional regulator [Haemophilus somnus 2336]
gi|168826848|gb|ACA32219.1| transcriptional regulator, DeoR family [Haemophilus somnus 2336]
Length = 260
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A+ A + + D + + +GST + L
Sbjct: 83 KLAIAKAAAERIADNNRIIIDSGSTTAALIKQL 115
>gi|315223835|ref|ZP_07865683.1| glucitol operon repressor [Capnocytophaga ochracea F0287]
gi|314946165|gb|EFS98166.1| glucitol operon repressor [Capnocytophaga ochracea F0287]
Length = 254
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 26/153 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI-PSSRNTENFCK 63
+ K +A+ ++ + + + +G+TA LA KI + V+ PS R CK
Sbjct: 78 EEKTRIITKALDFIKENEFIILSSGTTANL----LAQKIYGIRNLTVLTPSLRVALEVCK 133
Query: 64 IHHIPLHSP------EDVSSVDL-------------SIDGFDEIDSRLRLIKGY-GGALL 103
+ S++ + G + ID L G A L
Sbjct: 134 NPSVNTIHLGGEVRKNSTSTIGVLAEETLSNFSCTTLFLGVEGIDLDYGLSSTNVGEAHL 193
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
K++ + IV+ D SK + +E
Sbjct: 194 NRKMMERV-DKTIVLADSSKIHKRGFGFICYVE 225
>gi|296102327|ref|YP_003612473.1| hypothetical protein ECL_01972 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056786|gb|ADF61524.1| hypothetical protein ECL_01972 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 255
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+N AR+ + + G + + G+T E + L
Sbjct: 73 KMDAKKNVARKGAKLISPGQVVIVDGGTTTSELIAYL 109
>gi|117620685|ref|YP_858672.1| glucitol operon repressor [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562092|gb|ABK39040.1| glucitol operon repressor [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 257
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 18/145 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR A + + D + + +GST + +L +K + +
Sbjct: 79 KLAIARAAAERLRDHNRVIIDSGSTTSAMIPMLGNKRGLIVMTNSLNVAGALRELENEPT 138
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + + G D ID + + +++A
Sbjct: 139 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDPERGTT-TFNELVGLSRVMA 197
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
+ IV+ + K + LP
Sbjct: 198 EVSREVIVMVESEKIGRKIPNLELP 222
>gi|6425140|gb|AAF08319.1|AF202665_2 transcriptional regulator [Spiroplasma citri]
gi|110005294|emb|CAK99618.1| putative transcriptional regulator with helix-turn-helix domain
transmembrane protein [Spiroplasma citri]
Length = 233
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 24/155 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIA-NGFR 48
+ K AR+A++ + M L + GS+ + LL + +A GF
Sbjct: 79 EEKYLIARQAVKKIKPKMCLYLDAGSSTLALIKLLQPADDLVIITNSIFHVELLALAGFN 138
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + + + +D + G +EI+ + A+++ ++I
Sbjct: 139 NVYVLGGKYKHQTGALIGWEAVTTLQKYQIDCAFLGVNEINGQDLYTTDPDEAMIKAEVI 198
Query: 109 AHAASRFIVIGDESK-----RVDFLGRGMLPIEID 138
A +I + D SK V F R +EI
Sbjct: 199 KRATKSYI-LADLSKFNIKSLVKFASRSE--VEII 230
>gi|254229757|ref|ZP_04923165.1| transcriptional regulator of sugar metabolism [Vibrio sp. Ex25]
gi|262392418|ref|YP_003284272.1| transcriptional regulator of GlmS, DeoR family [Vibrio sp. Ex25]
gi|151937724|gb|EDN56574.1| transcriptional regulator of sugar metabolism [Vibrio sp. Ex25]
gi|262336012|gb|ACY49807.1| transcriptional regulator of GlmS, DeoR family [Vibrio sp. Ex25]
Length = 253
Score = 38.3 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K N A+ A + D + + +GST + L DK +AN ++ P+
Sbjct: 79 KLNLAKAAASLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESK 123
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESEK 211
>gi|302335326|ref|YP_003800533.1| transcriptional regulator, DeoR family [Olsenella uli DSM 7084]
gi|301319166|gb|ADK67653.1| transcriptional regulator, DeoR family [Olsenella uli DSM 7084]
Length = 265
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
KR A A + V DG +L + +G+TA EF+ L+
Sbjct: 87 AKRAIAHEAARLVSDGESLLLDSGTTALEFVRALSSH 123
>gi|167465844|ref|ZP_02330933.1| transcriptional regulator, DeoR family protein [Paenibacillus
larvae subsp. larvae BRL-230010]
gi|322384503|ref|ZP_08058185.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321150713|gb|EFX44188.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 254
Score = 38.3 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 2 DALQMKRNAARR--AIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K AA A+ ++ +G + + GST E L DK
Sbjct: 73 NQKNQKEKAAIASYALSFIQEGDIIALDAGSTTLEIARCLPDK 115
>gi|324992218|gb|EGC24140.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK405]
gi|324994309|gb|EGC26223.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK678]
gi|325697842|gb|EGD39726.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK160]
gi|327490736|gb|EGF22517.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1058]
gi|332364833|gb|EGJ42602.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1059]
Length = 247
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICQTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 EASDQMIVLTDSSKF 206
>gi|195977593|ref|YP_002122837.1| lactose phosphotransferase system repressor LacR [Streptococcus
equi subsp. zooepidemicus MGCS10565]
gi|195974298|gb|ACG61824.1| lactose phosphotransferase system repressor LacR [Streptococcus
equi subsp. zooepidemicus MGCS10565]
Length = 260
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++ K+ AR A Q + DG T+ +G G+T + L ++
Sbjct: 76 QIEEKKEIARYASQLINDGETIFIGPGTTLECLAEALVNR 115
>gi|113461673|ref|YP_719742.1| DeoR family transcriptional regulator [Haemophilus somnus 129PT]
gi|112823716|gb|ABI25805.1| transcriptional regulator, DeoR family [Haemophilus somnus 129PT]
Length = 260
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A+ A + + D + + +GST + L
Sbjct: 83 KLAIAKAAAERIADNNRIIIDSGSTTAALIKQL 115
>gi|16802397|ref|NP_463882.1| hypothetical protein lmo0352 [Listeria monocytogenes EGD-e]
gi|47096683|ref|ZP_00234269.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
1/2a F6854]
gi|224498803|ref|ZP_03667152.1| hypothetical protein LmonF1_03508 [Listeria monocytogenes Finland
1988]
gi|224502357|ref|ZP_03670664.1| hypothetical protein LmonFR_07529 [Listeria monocytogenes FSL
R2-561]
gi|254829016|ref|ZP_05233703.1| transcriptional regulator [Listeria monocytogenes FSL N3-165]
gi|254831818|ref|ZP_05236473.1| hypothetical protein Lmon1_10715 [Listeria monocytogenes 10403S]
gi|254900703|ref|ZP_05260627.1| hypothetical protein LmonJ_12844 [Listeria monocytogenes J0161]
gi|254913596|ref|ZP_05263608.1| transcriptional regulator [Listeria monocytogenes J2818]
gi|254938073|ref|ZP_05269770.1| transcriptional regulator [Listeria monocytogenes F6900]
gi|255028215|ref|ZP_05300166.1| hypothetical protein LmonL_01319 [Listeria monocytogenes LO28]
gi|284800640|ref|YP_003412505.1| hypothetical protein LM5578_0387 [Listeria monocytogenes 08-5578]
gi|284993826|ref|YP_003415594.1| hypothetical protein LM5923_0386 [Listeria monocytogenes 08-5923]
gi|16409730|emb|CAC98431.1| lmo0352 [Listeria monocytogenes EGD-e]
gi|47014937|gb|EAL05884.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
1/2a F6854]
gi|258601427|gb|EEW14752.1| transcriptional regulator [Listeria monocytogenes FSL N3-165]
gi|258610685|gb|EEW23293.1| transcriptional regulator [Listeria monocytogenes F6900]
gi|284056202|gb|ADB67143.1| hypothetical protein LM5578_0387 [Listeria monocytogenes 08-5578]
gi|284059293|gb|ADB70232.1| hypothetical protein LM5923_0386 [Listeria monocytogenes 08-5923]
gi|293591609|gb|EFF99943.1| transcriptional regulator [Listeria monocytogenes J2818]
Length = 254
Score = 38.3 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFSRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|253687931|ref|YP_003017121.1| transcriptional regulator, DeoR family [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754509|gb|ACT12585.1| transcriptional regulator, DeoR family [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 256
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ AR A+Q + G TL + +GST L
Sbjct: 78 KQAIARAAVQQLKAGQTLFIDSGSTTSLLADEL 110
>gi|325849185|ref|ZP_08170654.1| transcriptional regulator, DeoR family [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480256|gb|EGC83322.1| transcriptional regulator, DeoR family [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 121
Score = 38.3 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 6/37 (16%), Positives = 20/37 (54%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+K++ A +A +++ D + + + +G+T + +
Sbjct: 82 DLKKSIALKASKFLEDDIVIFLDSGTTTYMLVDYIKK 118
>gi|157148700|ref|YP_001456019.1| DNA-binding transcriptional regulator AgaR [Citrobacter koseri ATCC
BAA-895]
gi|157085905|gb|ABV15583.1| hypothetical protein CKO_04529 [Citrobacter koseri ATCC BAA-895]
Length = 269
Score = 38.3 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 30/141 (21%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------------ 54
KR+ A+ A+ + G + + +G+T +A + + + +
Sbjct: 93 KRSIAQAAVSLIKPGHRVILDSGTTTY----EIARMMRQHTDIIAMTNGMNVANALLEAE 148
Query: 55 -----------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
R +++F + L +D D R A L
Sbjct: 149 GVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEARL 206
Query: 104 REKIIAHAASRFIVIGDESKR 124
++ A R IV+ D +K
Sbjct: 207 NRRMCE-VAERIIVVTDSTKF 226
>gi|330831697|ref|YP_004394649.1| DeoR family transcriptional regulator [Aeromonas veronii B565]
gi|328806833|gb|AEB52032.1| DeoR family transcriptional regulator [Aeromonas veronii B565]
Length = 257
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 18/145 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR A + + D + + +GST + +L +K + +
Sbjct: 79 KLAIARAAAERLRDHNRVIIDSGSTTSAMIPMLGNKRGLIVMTNSLNVAGALRELENEPT 138
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + + G D ID + + +++A
Sbjct: 139 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDPERGTT-TFNELVGLSRVMA 197
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
+ IV+ + K + LP
Sbjct: 198 EVSREVIVMVESEKIGRKIPNLELP 222
>gi|237730059|ref|ZP_04560540.1| DNA-binding transcriptional regulator AgaR [Citrobacter sp. 30_2]
gi|226908665|gb|EEH94583.1| DNA-binding transcriptional regulator AgaR [Citrobacter sp. 30_2]
Length = 268
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 30/141 (21%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------------ 54
KR+ AR A + + G + + +G+T +A + V + +
Sbjct: 93 KRSIARAAAELIQPGHRVILDSGTTTY----EIARLMRQHTNVIAMTNGMNVANALLEAE 148
Query: 55 -----------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
R +++F + L +D D R A L
Sbjct: 149 GVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEARL 206
Query: 104 REKIIAHAASRFIVIGDESKR 124
++ A R IV+ D +K
Sbjct: 207 NRRMCE-VAERIIVVTDSTKF 226
>gi|56962201|ref|YP_173924.1| DeoR family transcriptional regulator [Bacillus clausii KSM-K16]
gi|56908436|dbj|BAD62963.1| DeoR family transcriptional regulator [Bacillus clausii KSM-K16]
Length = 257
Score = 38.3 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 17/149 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSR 56
+ + K AR A ++ D + + +G+T K + L I+ N V +
Sbjct: 72 NQAE-KTRIAREAANFIKDDDLIFIDSGTTTKSILSALDPNISITVLTNSLDVINAATGF 130
Query: 57 NTENFC------KIHHIPLHSPEDVSSVDLS-IDGFDEIDSRLRLIKGYGGALLRE---- 105
+ K ++ + + I + + + G A E
Sbjct: 131 ERIHLIVIGNSYKHKTRSFVGIDEAAILQKYNIHKAFMSATGVSIAHGLTNADQLEYEIK 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLP 134
KI A A ++ D+SK P
Sbjct: 191 KIAAEKAREVFLLADQSKFGKSTLLTYAP 219
>gi|332654642|ref|ZP_08420385.1| putative glycerol-3-phosphate regulon repressor [Ruminococcaceae
bacterium D16]
gi|332516606|gb|EGJ46212.1| putative glycerol-3-phosphate regulon repressor [Ruminococcaceae
bacterium D16]
Length = 257
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 46/139 (33%), Gaps = 25/139 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A RA++Y+ DG T+ + G+T L+ + + +I +S +
Sbjct: 81 KAKIAARALEYIPDGATIALDIGTTTY----ELSSLLGTKKDLTIITNSLRVATNMAQNT 136
Query: 67 IPLHS---------------------PEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ +++D + D I + + + +
Sbjct: 137 DHCVYCIGGQMTRVEIVAGGMAARDFLNNFAAIDYYLCSTDGITIENGMTEFDEAVVAVK 196
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + + + I + D SK
Sbjct: 197 RRLVEMSDQVISLIDHSKF 215
>gi|46906592|ref|YP_012981.1| DeoR family transcriptional regulator [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091490|ref|ZP_00229287.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
4b H7858]
gi|226222978|ref|YP_002757085.1| regulatory protein (DeoR family) [Listeria monocytogenes Clip81459]
gi|254825839|ref|ZP_05230840.1| transcriptional regulator [Listeria monocytogenes FSL J1-194]
gi|254854500|ref|ZP_05243848.1| transcriptional regulator [Listeria monocytogenes FSL R2-503]
gi|254933355|ref|ZP_05266714.1| transcriptional regulator [Listeria monocytogenes HPB2262]
gi|254992188|ref|ZP_05274378.1| regulatory protein (DeoR family) [Listeria monocytogenes FSL
J2-064]
gi|255522338|ref|ZP_05389575.1| regulatory protein (DeoR family) [Listeria monocytogenes FSL
J1-175]
gi|300766368|ref|ZP_07076326.1| DeoR family transcriptional regulator [Listeria monocytogenes FSL
N1-017]
gi|46879857|gb|AAT03158.1| transcriptional regulator, DeoR family [Listeria monocytogenes
serotype 4b str. F2365]
gi|47020167|gb|EAL10903.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
4b H7858]
gi|225875440|emb|CAS04137.1| Putative regulatory protein (DeoR family) [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258607899|gb|EEW20507.1| transcriptional regulator [Listeria monocytogenes FSL R2-503]
gi|293584916|gb|EFF96948.1| transcriptional regulator [Listeria monocytogenes HPB2262]
gi|293595078|gb|EFG02839.1| transcriptional regulator [Listeria monocytogenes FSL J1-194]
gi|300512919|gb|EFK40008.1| DeoR family transcriptional regulator [Listeria monocytogenes FSL
N1-017]
gi|328467801|gb|EGF38847.1| regulatory protein (DeoR family) [Listeria monocytogenes 1816]
gi|328475971|gb|EGF46689.1| regulatory protein (DeoR family) [Listeria monocytogenes 220]
gi|332310769|gb|EGJ23864.1| Transcriptional regulator [Listeria monocytogenes str. Scott A]
Length = 254
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFSRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|319745910|gb|EFV98196.1| lactose PTS family porter repressor [Streptococcus agalactiae ATCC
13813]
gi|322411777|gb|EFY02685.1| putative lactose phosphotransferase system repressor protein
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 257
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTNEKKQIAQRANDIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|153833671|ref|ZP_01986338.1| glycerol-3-phosphate regulon repressor [Vibrio harveyi HY01]
gi|148870069|gb|EDL69024.1| glycerol-3-phosphate regulon repressor [Vibrio harveyi HY01]
Length = 250
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 57/163 (34%), Gaps = 14/163 (8%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ + K+ A ++ + +G TL +G G+T +A+++AN ++V+ ++ +
Sbjct: 75 NQQE-KQTIADEVVKAIPNGATLFLGIGTTIAL----IAERLANHSELRVVTNNFEAAHI 129
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGDE 121
H + + + + D +D G A + A
Sbjct: 130 L-SHFENIETWIPGGRIRT--NDRDVVDGSAEQFYGQFSADIGIIGCAGVTEI------A 180
Query: 122 SKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRL 164
D + G I+ F + L K + +E+ L
Sbjct: 181 QSYSDMINLGSTTIDTQPFAMEHELREAKVSQAILANSEQKWL 223
>gi|167039729|ref|YP_001662714.1| DeoR family transcriptional regulator [Thermoanaerobacter sp. X514]
gi|300915022|ref|ZP_07132337.1| transcriptional regulator, DeoR family [Thermoanaerobacter sp.
X561]
gi|307724943|ref|YP_003904694.1| DeoR family transcriptional regulator [Thermoanaerobacter sp. X513]
gi|166853969|gb|ABY92378.1| transcriptional regulator, DeoR family [Thermoanaerobacter sp.
X514]
gi|300888746|gb|EFK83893.1| transcriptional regulator, DeoR family [Thermoanaerobacter sp.
X561]
gi|307582004|gb|ADN55403.1| transcriptional regulator, DeoR family [Thermoanaerobacter sp.
X513]
Length = 251
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K+ A +A+ V +G + + GST +A + N + V+
Sbjct: 76 EEKQKIAAKAVGEVKEGDVIFLDAGSTTYH----IARLLKNFNNITVVT 120
>gi|290892495|ref|ZP_06555489.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290558061|gb|EFD91581.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 254
Score = 38.3 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFSRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|217965556|ref|YP_002351234.1| DeoR family transcriptional regulator [Listeria monocytogenes
HCC23]
gi|217334826|gb|ACK40620.1| transcriptional regulator, DeoR family [Listeria monocytogenes
HCC23]
gi|307569892|emb|CAR83071.1| transcriptional regulator, DeoR family [Listeria monocytogenes L99]
Length = 254
Score = 38.3 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFSRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|225869099|ref|YP_002745047.1| lactose phosphotransferase system repressor [Streptococcus equi
subsp. zooepidemicus]
gi|225702375|emb|CAX00212.1| lactose phosphotransferase system repressor [Streptococcus equi
subsp. zooepidemicus]
Length = 260
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++ K+ AR A Q V DG T+ +G G+T + L ++
Sbjct: 76 QIEEKKEIARYASQLVNDGETIFIGPGTTLECLAEALINR 115
>gi|206901630|ref|YP_002250163.1| DeoR-family transcriptional regulator [Dictyoglomus thermophilum
H-6-12]
gi|206740733|gb|ACI19791.1| DeoR-family transcriptional regulator [Dictyoglomus thermophilum
H-6-12]
Length = 257
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 43/148 (29%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN------ 60
K+ + A + + DG ++ + TGST +A I + V VI +S
Sbjct: 79 KQAIGKVAAELINDGESVFIETGSTTL----QIAKNIKHKHDVTVITNSIEVARELLSAR 134
Query: 61 ----------FCKIHHIPLHSPEDV----SSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
K + + VD G I + +K
Sbjct: 135 GVEVILTGGLLRKETVALIGPLAERVLKEFRVDKVFLGISGIIPSKGMYTASIAEAQIKK 194
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
+I I + D SK + P
Sbjct: 195 LIIEMGREIIGVSDHSKFGKECFAFVAP 222
>gi|196248737|ref|ZP_03147437.1| glucosamine-6-phosphate isomerase [Geobacillus sp. G11MC16]
gi|196211613|gb|EDY06372.1| glucosamine-6-phosphate isomerase [Geobacillus sp. G11MC16]
Length = 252
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 1 MDALQMKRNAARRAIQYVV--DGMTLGMGTGSTAKEFMILL-ADKIANGFRVQVIPS 54
MD M R AAR IQ V LG+ TGST L AD +G Q + +
Sbjct: 7 MDYADMSRQAARMIIQQVKEKPNAVLGLATGSTVLGVYRELVADHRQHGTSYQFVRT 63
>gi|169335310|ref|ZP_02862503.1| hypothetical protein ANASTE_01722 [Anaerofustis stercorihominis DSM
17244]
gi|169258048|gb|EDS72014.1| hypothetical protein ANASTE_01722 [Anaerofustis stercorihominis DSM
17244]
Length = 253
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 15/138 (10%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----------KIANGF--- 47
M A+ KR A + + D + + GST E L D +IAN
Sbjct: 74 MTAINEKRKIGALAAKLIQDKQIVIIDNGSTTNEIASYLNDKEIVVVTNDVRIANKLATY 133
Query: 48 --RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
VI I + D+ D ++ L + ++ +
Sbjct: 134 PSMSVVICGGYIKTPGYAIFGPMAEDLFKHTLADICFLSVDSLNINEGLSYNFLDSVAVK 193
Query: 106 KIIAHAASRFIVIGDESK 123
K + A++ IV+ D SK
Sbjct: 194 KQMIKNANKVIVLCDSSK 211
>gi|302336768|ref|YP_003801974.1| DeoR family transcriptional regulator [Spirochaeta smaragdinae DSM
11293]
gi|301633953|gb|ADK79380.1| transcriptional regulator, DeoR family [Spirochaeta smaragdinae DSM
11293]
Length = 259
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
K+ AR A+ +V + + + GST + F +L I
Sbjct: 84 KKAIARHALNFVEEDDIIFIDAGSTTETFASMLPPDIR 121
>gi|288935122|ref|YP_003439181.1| DeoR family transcriptional regulator [Klebsiella variicola At-22]
gi|288889831|gb|ADC58149.1| transcriptional regulator, DeoR family [Klebsiella variicola At-22]
Length = 254
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 18/138 (13%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN----- 57
A K+ A +A Q V G +L + G+T EF ++ I + + P N
Sbjct: 77 AEDEKKAIAEKAAQLVKPGDSLFIDFGTTTMEFARQISG-INDLTVITNSPVIANLFHDN 135
Query: 58 --TENFCKIHHIPLHSPEDVSSV----------DLSIDGFDEIDSRLRLIKGYGGALLRE 105
T+ E V + D + G + ++
Sbjct: 136 ATTQLILIGGQFGSSKMECVGPIALQSISAFYADYAFIGAGAVSPDAGVMDQSLDEAAIA 195
Query: 106 KIIAHAASRFIVIGDESK 123
+ + +++ +V+ D K
Sbjct: 196 RQMIKQSNQTVVLADGHK 213
>gi|229820003|ref|YP_002881529.1| DeoR family transcriptional regulator [Beutenbergia cavernae DSM
12333]
gi|229565916|gb|ACQ79767.1| transcriptional regulator, DeoR family [Beutenbergia cavernae DSM
12333]
Length = 280
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 48/151 (31%), Gaps = 21/151 (13%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-------------------KI 43
+ K A ++ + GM++ + T ST +A +
Sbjct: 89 QSEHKDALAEAVLERIEPGMSVMLDTSSTNVFLARRIARLDDVPLTVITNYQPILHTLRS 148
Query: 44 ANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
+G + +I +T + I + +L++ + + +L
Sbjct: 149 CDGVSLIMIGGRYSTVHDAF-FGIDAVAMTQGLRANLAVLSTSAMTPDETYHQDQD-IVL 206
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
++ + AA +++ D +K + P
Sbjct: 207 MKRAMMAAADERVLLMDPTKIRRTALHRLAP 237
>gi|138895845|ref|YP_001126298.1| N-acetylglucosamine-6-phosphate isomerase [Geobacillus
thermodenitrificans NG80-2]
gi|134267358|gb|ABO67553.1| N-acetylglucosamine-6-phosphate isomerase [Geobacillus
thermodenitrificans NG80-2]
Length = 254
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 1 MDALQMKRNAARRAIQYVV--DGMTLGMGTGSTAKEFMILL-ADKIANGFRVQVIPS 54
MD M R AAR IQ V LG+ TGST L AD +G Q + +
Sbjct: 9 MDYADMSRQAARMIIQQVKEKPNAVLGLATGSTVLGVYRELVADHRQHGTSYQFVRT 65
>gi|326392902|ref|ZP_08214114.1| transcriptional regulator, DeoR family [Thermoanaerobacter
ethanolicus JW 200]
gi|325991056|gb|EGD49836.1| transcriptional regulator, DeoR family [Thermoanaerobacter
ethanolicus JW 200]
Length = 116
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K+ A RA+ + +G + + GST +A I N + V+
Sbjct: 49 EEKQKIAARAVSEIQEGHVIFLDAGSTTYH----IARAIRNFKGITVVT 93
>gi|311109640|ref|YP_003982493.1| DeoR-like helix-turn-helix domain-containing protein 2
[Achromobacter xylosoxidans A8]
gi|310764329|gb|ADP19778.1| DeoR-like helix-turn-helix domain protein 2 [Achromobacter
xylosoxidans A8]
Length = 253
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 39/137 (28%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR AR A V G TL + GST LA + +
Sbjct: 76 KRAIARAAAGLVSSGQTLFLDAGSTTSVLADELAKLSGLTVITNSFDVALKVGTAGNGAN 135
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL--------------------REK 106
+ V + G D + + + ALL +
Sbjct: 136 QLIMLGGSVGGPVCATAG-DITIAEIHRYRA-DLALLSPVGVDAEFGATNYDLREAEVAR 193
Query: 107 IIAHAASRFIVIGDESK 123
+A A + +++ D SK
Sbjct: 194 AMAANAKQLVLLADFSK 210
>gi|16799447|ref|NP_469715.1| hypothetical protein lin0370 [Listeria innocua Clip11262]
gi|16412799|emb|CAC95603.1| lin0370 [Listeria innocua Clip11262]
gi|313625219|gb|EFR95066.1| DeoR family transcriptional regulator [Listeria innocua FSL J1-023]
Length = 254
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFSRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|127514765|ref|YP_001095962.1| DeoR family transcriptional regulator [Shewanella loihica PV-4]
gi|126640060|gb|ABO25703.1| transcriptional regulator, DeoR family [Shewanella loihica PV-4]
Length = 256
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMI---------------LLADKIAN-----G 46
K + A A + + D + + +GST + LA+ I
Sbjct: 78 KLSIAEAAARLIKDHNRIIIDSGSTTSGLVQQLNTKRGLVVMTNSLQLANAIHELENEPT 137
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + + + + DG D + G + K
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLARGTTTFNELTGLS----K 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A + IV+ D K + LP
Sbjct: 194 VMAEVSREVIVMVDSDKIGRRIPNLELP 221
>gi|328954849|ref|YP_004372182.1| DeoR family transcriptional regulator [Coriobacterium glomerans
PW2]
gi|328455173|gb|AEB06367.1| transcriptional regulator, DeoR family [Coriobacterium glomerans
PW2]
Length = 255
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 35/138 (25%), Gaps = 25/138 (18%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMI------------------LLADKIANGF 47
K A +A V T+ + +GST LA
Sbjct: 83 AKETIAEKAAALVRSDSTIFLDSGSTTTMVARDLDDQRMLVFTASLTCAMELARLSLARS 142
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLRE 105
+ +R + + EDV ++ G G +
Sbjct: 143 IIVGGALNRFSFSLNGGRT-----LEDVRGLNFDQFFLGITSYQDDFGFSCGSDEETAVK 197
Query: 106 KIIAHAASRFIVIGDESK 123
+ A + + + D SK
Sbjct: 198 RACIERAEQTVALMDSSK 215
>gi|329115993|ref|ZP_08244710.1| transcriptional regulator, DeoR family [Streptococcus parauberis
NCFD 2020]
gi|326906398|gb|EGE53312.1| transcriptional regulator, DeoR family [Streptococcus parauberis
NCFD 2020]
Length = 257
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTNEKKQIAQRANDIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|312963995|ref|ZP_07778466.1| transcriptional regulator, DeoR family [Pseudomonas fluorescens
WH6]
gi|311282030|gb|EFQ60640.1| transcriptional regulator, DeoR family [Pseudomonas fluorescens
WH6]
Length = 255
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS------- 54
KR AR A+ + + + + +GST + L + + N V S
Sbjct: 78 KRAIARAAVVRLREHARIIIDSGSTTAAMIPELGHQPGLVVMTNSLHVASALSELEHEPV 137
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++++F + D + + DG D R + L +
Sbjct: 138 LLMTGGTWDPHSDSFQGQVAEQVLRSYDFDQLFIGADGIDL----ERGTTTFNELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVMVESDKIGRKIPNLELP 221
>gi|26249135|ref|NP_755175.1| putative transcriptional regulator YgbI [Escherichia coli CFT073]
gi|227888275|ref|ZP_04006080.1| glycerol-3-phosphate regulon repressor [Escherichia coli 83972]
gi|300976222|ref|ZP_07173319.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|300976804|ref|ZP_07173621.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|301049506|ref|ZP_07196464.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|26109542|gb|AAN81745.1|AE016765_147 Hypothetical transcriptional regulator ygbI [Escherichia coli
CFT073]
gi|227834544|gb|EEJ45010.1| glycerol-3-phosphate regulon repressor [Escherichia coli 83972]
gi|300298737|gb|EFJ55122.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|300308567|gb|EFJ63087.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|300409990|gb|EFJ93528.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|307554712|gb|ADN47487.1| putative DEOR-type transcriptional regulator [Escherichia coli ABU
83972]
gi|315293706|gb|EFU53058.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 153-1]
gi|315298775|gb|EFU58029.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 16-3]
gi|324015285|gb|EGB84504.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 60-1]
Length = 265
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 86 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLTHMEPLTVVTNDFVIADYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|317472047|ref|ZP_07931379.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
gi|316900451|gb|EFV22433.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
Length = 180
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 15/133 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+K RA++++ DG + + +GST +L+ K + ++ +
Sbjct: 7 LKEKLCERAMEFIGDGNVIFLDSGSTIFCLAGMLSKKSGYTIVTTSLEAAYALVHSSNKV 66
Query: 66 HIPLHSPEDVSS---------------VDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ S VD++ G + + ++ I
Sbjct: 67 ILTGGMLNPNSMAAEGFQATSLINSLKVDIAFLGTNGFEQHKGPAVSDFQDAQTKQAIIP 126
Query: 111 AASRFIVIGDESK 123
A +VI D SK
Sbjct: 127 NARTNVVIADSSK 139
>gi|294490616|gb|ADE89372.1| transcriptional regulator, DeoR family [Escherichia coli IHE3034]
Length = 255
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 76 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLIHMEPLTVVTNDFVIADYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQAATWLALPL 222
>gi|217966792|ref|YP_002352298.1| DeoR family transcriptional regulator [Dictyoglomus turgidum DSM
6724]
gi|217335891|gb|ACK41684.1| transcriptional regulator, DeoR family [Dictyoglomus turgidum DSM
6724]
Length = 254
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 22/132 (16%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRV--QVIPSSRNTENFCKIHHIPLHS 71
A+ + DG + M G+T + L + I ++ N K +
Sbjct: 86 ALSLLKDGSIIAMSGGTTIYYMVQALDQSPITNLTILTNSITTAWAVINLRKNFRLIHSG 145
Query: 72 ------------------PEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAA 112
+++ +D G + +D A + K I A
Sbjct: 146 GTTKEKSFECIGGHVIKFFQEIGKIDYYFFGANGVDIKNGITFFDMEEAEV-AKTIISKA 204
Query: 113 SRFIVIGDESKR 124
+ +++ D SK
Sbjct: 205 EKKVLVADSSKF 216
>gi|99080386|ref|YP_612540.1| DeoR family transcriptional regulator [Ruegeria sp. TM1040]
gi|99036666|gb|ABF63278.1| transcriptional regulator, DeoR family [Ruegeria sp. TM1040]
Length = 265
Score = 38.3 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
K+ A + DG + +GTG+T + LA +
Sbjct: 81 KQQIAMAVKPMIEDGSRVALGTGTTVEACARQLAASHRD 119
>gi|323353533|ref|ZP_08088066.1| DeoR family transcriptional regulator [Streptococcus sanguinis
VMC66]
gi|322121479|gb|EFX93242.1| DeoR family transcriptional regulator [Streptococcus sanguinis
VMC66]
gi|324990393|gb|EGC22331.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK353]
gi|325688592|gb|EGD30609.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK72]
gi|327459134|gb|EGF05482.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1057]
gi|332359363|gb|EGJ37184.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK49]
Length = 247
Score = 38.3 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICRTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 EASDQMIVLTDSSKF 206
>gi|317048114|ref|YP_004115762.1| DeoR family transcriptional regulator [Pantoea sp. At-9b]
gi|316949731|gb|ADU69206.1| transcriptional regulator, DeoR family [Pantoea sp. At-9b]
Length = 269
Score = 38.3 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
KR+ A A + + G + + +G+T +A + V + + N N
Sbjct: 92 AKRSIASVAAELIKPGHRVILDSGTTTF----EIARHMRQHQNVIAMTNGMNVANALVEA 147
Query: 66 HIPLHSPE----DVSSVDLSIDGFDEIDSRLRL---IKGYGGALLRE------------- 105
S+ D D G L
Sbjct: 148 EGVEVLMTGGHLRRQSLSFYGDQADHSLQNYHFDLLFLGVDAIDLERGISTHNEDEARLN 207
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A R IV+ D SK
Sbjct: 208 RRMCEVAERIIVVTDSSKF 226
>gi|123442683|ref|YP_001006660.1| DNA-binding transcriptional regulator AgaR [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122089644|emb|CAL12494.1| DeoR-family regulatory protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 269
Score = 38.3 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
+KR+ AR A + G + + +G+T +A + N V + + N N
Sbjct: 92 LKRSIARVAADLIKPGHHVILDSGTTTC----EIARYMRNHKEVIAMTNGMNVANSLLDA 147
Query: 66 HIPLHSPE----DVSSVDLSIDGFDEIDSRLRL---IKGYGGALLRE------------- 105
S+ D D+ G L
Sbjct: 148 EGVELLMTGGHLRRQSLSFYGDQADQSLQNYHFDMLFLGVDAISLERGVSTHNEDEARLN 207
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A R IV+ D +K
Sbjct: 208 RRMCEVAERIIVVTDSNKF 226
>gi|163737629|ref|ZP_02145046.1| transcriptional regulator [Phaeobacter gallaeciensis BS107]
gi|161389155|gb|EDQ13507.1| transcriptional regulator [Phaeobacter gallaeciensis BS107]
Length = 263
Score = 37.9 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M K A Q++ DG + + TGST+ L + N V T
Sbjct: 69 MSQNRAAKVAIANAVAQWIPDGSAIAIDTGSTSGFVAQALRGR-KNLTVVTNSAFIAATL 127
Query: 60 NFCKIHHIPLHSPE 73
+ + + + + +
Sbjct: 128 SMEEGNRVFMAGTQ 141
>gi|325971361|ref|YP_004247552.1| DeoR family transcriptional regulator [Spirochaeta sp. Buddy]
gi|324026599|gb|ADY13358.1| transcriptional regulator, DeoR family [Spirochaeta sp. Buddy]
Length = 250
Score = 37.9 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 24/153 (15%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++ + K +A ++ + + +G G+T + LA G V V+ + +
Sbjct: 74 NSDE-KYLICSKAASFIENNEFIYVGPGTTEDYLIGFLA-----GKNVTVVTNGIYHVSK 127
Query: 62 CKIHHIPLH----SPEDVSSVDLSIDGFDEIDS---RLRLIKGYGGALLRE--------- 105
+ I + + + +EID LI AL
Sbjct: 128 LLEYKIKTIVIGGQLDHNYGITHGPEVLEEIDRMNFSTCLIGASSVALTGVSSFDRDVSV 187
Query: 106 --KIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + + + I+I D +K F IE
Sbjct: 188 INRKVISRSQKRILIADSTKFAAFSPHVFAKIE 220
>gi|229525176|ref|ZP_04414581.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
bv. albensis VL426]
gi|229338757|gb|EEO03774.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
bv. albensis VL426]
Length = 256
Score = 37.9 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 79 KISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 138
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESDKV 212
>gi|325168871|ref|YP_004280661.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium sp. H13-3]
gi|325064594|gb|ADY68283.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium sp. H13-3]
Length = 253
Score = 37.9 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A V DGM + + TG+T + L I + V+
Sbjct: 79 KAKIGEAAASLVEDGMKVFIDTGTTT---IACL-KHIETRKDLTVVS 121
>gi|110642873|ref|YP_670603.1| DeoR family transcriptional regulator [Escherichia coli 536]
gi|110344465|gb|ABG70702.1| putative regulatory protein, DeoR family [Escherichia coli 536]
Length = 265
Score = 37.9 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 86 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLTHMEPLTVVTNDFVIADYLLD 142
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 143 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 202
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 203 RAIASASRQRVLVCDATKYGQVATWLALPL 232
>gi|262066355|ref|ZP_06025967.1| lactose phosphotransferase system repressor [Fusobacterium
periodonticum ATCC 33693]
gi|291379919|gb|EFE87437.1| lactose phosphotransferase system repressor [Fusobacterium
periodonticum ATCC 33693]
Length = 245
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 17/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL---------------LADKIANGFRVQV 51
K+ A+ A Q++ DG + + G+T E + L IAN +
Sbjct: 78 KKKIAQMAAQFISDGDYIYLDAGTTTYEIIDYMKGKDIKVVTNGIIHLERLIANDIETYL 137
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
I + L + D + G + I+ AL +K
Sbjct: 138 IGGRIKKSTLAIVGVKALRDLSEF-RFDKAFIGINGINENGYSTHDVEEAL-IKKQAIEN 195
Query: 112 ASRFIVIGDESKR 124
+++ ++ D +K
Sbjct: 196 SNKAFILADSTKF 208
>gi|139438390|ref|ZP_01771906.1| Hypothetical protein COLAER_00896 [Collinsella aerofaciens ATCC
25986]
gi|133775929|gb|EBA39749.1| Hypothetical protein COLAER_00896 [Collinsella aerofaciens ATCC
25986]
Length = 267
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K+ A+ AI+ V DG TL + +G+TA EF+ LL + + ++ T
Sbjct: 85 AKQAIAQSAIELVSDGDTLLVDSGTTALEFVRLL-----DQHDGITVITADITIADYIDE 139
Query: 66 HIPLHS 71
+P
Sbjct: 140 SMPSVD 145
>gi|125717153|ref|YP_001034286.1| sugar metabolism transcriptional repressor [Streptococcus sanguinis
SK36]
gi|125497070|gb|ABN43736.1| Transcriptional repressor of sugar metabolism, GlpR/DeoR family,
putative [Streptococcus sanguinis SK36]
gi|327468652|gb|EGF14131.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK330]
Length = 247
Score = 37.9 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICRTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 EASDQMIVLTDSSKF 206
>gi|329923231|ref|ZP_08278716.1| transcriptional regulator, DeoR family [Paenibacillus sp. HGF5]
gi|328941466|gb|EGG37757.1| transcriptional regulator, DeoR family [Paenibacillus sp. HGF5]
Length = 254
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 25/154 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------- 54
L+ K AR+ ++V DG + + +GST +A + + ++ V+ +
Sbjct: 74 SQLEEKDRIARKCSEFVHDGDCIYIDSGSTTY----QIAKYVKHKKKLTVVTNSLPVAIE 129
Query: 55 -------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
E + + + + +++ + I + A
Sbjct: 130 LMDSDVELIMIGGKIRREEQSVVAYEYIFNFHELNVLKAFICCSGITIEKGISDYNLEEA 189
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ R+K+I + IV+ D +K + + P+
Sbjct: 190 ITRKKMIE-LSKEVIVMADSTKFGKDVTISIAPL 222
>gi|157370883|ref|YP_001478872.1| DeoR family transcriptional regulator [Serratia proteamaculans 568]
gi|157322647|gb|ABV41744.1| transcriptional regulator, DeoR family [Serratia proteamaculans
568]
Length = 248
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K+ A+ A V D T+ + +GS A LA IA R+ +I S N
Sbjct: 67 MSNFTLKQKLAQYAASLVNDDETIFIESGS-ANAL---LARYIAERKRITLITVSHYIAN 122
Query: 61 FCKIHHIPLHSP 72
K +
Sbjct: 123 LLKETDCEVIVL 134
>gi|306812385|ref|ZP_07446583.1| putative DNA-binding transcriptional regulator [Escherichia coli
NC101]
gi|305854423|gb|EFM54861.1| putative DNA-binding transcriptional regulator [Escherichia coli
NC101]
Length = 255
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 76 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLTHMEPLTVVTNDFVIADYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|160935598|ref|ZP_02082973.1| hypothetical protein CLOBOL_00488 [Clostridium bolteae ATCC
BAA-613]
gi|158441342|gb|EDP19052.1| hypothetical protein CLOBOL_00488 [Clostridium bolteae ATCC
BAA-613]
Length = 259
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 54/153 (35%), Gaps = 18/153 (11%)
Query: 2 DALQMKRNAAR--RAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------I 43
++ +++ AA +A V +G + + GST++ ++L ++ +
Sbjct: 78 NSQNLEQKAAITSKAAGLVSEGQVIALDYGSTSQMMALVLKERFRNLTVVTNSIQNALML 137
Query: 44 ANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
A + +I + S + +D+ ID + +
Sbjct: 138 AENPGITIILTGGILNRDEYTLVNEFSSTLESIHIDIMFMTVTGIDPVIGCTDQRLSEIR 197
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + +A+R IV+ D +K + P E
Sbjct: 198 IQNQMHRSATRTIVLADSTKFGKASLLKICPFE 230
>gi|325261559|ref|ZP_08128297.1| lactose phosphotransferase system repressor [Clostridium sp. D5]
gi|324033013|gb|EGB94290.1| lactose phosphotransferase system repressor [Clostridium sp. D5]
Length = 250
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 44/133 (33%), Gaps = 18/133 (13%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ + K AR A + + + G+T + + ++ A + + +R
Sbjct: 79 NQTE-KIKIARYAASMIKKDDFVYLDAGTTTGYMIDYIQERTAT-YVTNGVSHARRLSAM 136
Query: 62 CKIHHIPLHSPEDVSSVDL---SIDGFDEID-------------SRLRLIKGYGGALLRE 105
I ++ + + +++ D+ + AL+++
Sbjct: 137 GFKTMIIGGELKESTEAVVGGEALNCLDKYNFTIGFFGANGINKKNGYTTPDVSEALVKQ 196
Query: 106 KIIAHAASRFIVI 118
K + + ++++
Sbjct: 197 KAMEKSQKKYMLC 209
>gi|295103763|emb|CBL01307.1| Transcriptional regulators of sugar metabolism [Faecalibacterium
prausnitzii SL3/3]
Length = 252
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A +A + TL + +GSTA + D+
Sbjct: 77 EAKQIIAEKAAALLRPNTTLFLDSGSTATAVARCIPDQ 114
>gi|191171305|ref|ZP_03032855.1| transcriptional regulator, DeoR family [Escherichia coli F11]
gi|331658846|ref|ZP_08359788.1| regulatory protein, DeoR family [Escherichia coli TA206]
gi|190908605|gb|EDV68194.1| transcriptional regulator, DeoR family [Escherichia coli F11]
gi|320194871|gb|EFW69500.1| Putative transcriptional regulator YgbI, DeoR family [Escherichia
coli WV_060327]
gi|331053428|gb|EGI25457.1| regulatory protein, DeoR family [Escherichia coli TA206]
Length = 255
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M K + A V G + + G+T L IA+
Sbjct: 76 MTQ---KAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLTHMEPLTVVTNDFVIADYLLD 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+ +T + + + + I + ++G + +
Sbjct: 133 NSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ IA A+ + +++ D +K LP+
Sbjct: 193 RAIASASRQRVLVCDATKYGQVATWLALPL 222
>gi|160943508|ref|ZP_02090741.1| hypothetical protein FAEPRAM212_00999 [Faecalibacterium prausnitzii
M21/2]
gi|158445187|gb|EDP22190.1| hypothetical protein FAEPRAM212_00999 [Faecalibacterium prausnitzii
M21/2]
Length = 262
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A +A + TL + +GSTA + D+
Sbjct: 89 EAKQIIAEKAAALLRPNTTLFLDSGSTATAVARCIPDQ 126
>gi|70734006|ref|YP_257646.1| DeoR family transcriptional regulator [Pseudomonas fluorescens
Pf-5]
gi|68348305|gb|AAY95911.1| transcriptional regulator, DeoR family [Pseudomonas fluorescens
Pf-5]
Length = 254
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 46/151 (30%), Gaps = 15/151 (9%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPS 54
M+ Q KR R A G ++ + TG+T F LA I N +
Sbjct: 72 MNEHAQEKRAIGRYAAGLFCAGDSIFIDTGTTTLFFARELAQHTRLTVITNSLPIAGCIG 131
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA--- 111
F S ++V ++ L + + I + I A
Sbjct: 132 ESGNRVFMIGGEYRPDSTQNVGTLALEQITRFNAEHAVITIGALNEDGAMDFSIEEAEVA 191
Query: 112 ------ASRFIVIGDESKRVDFLGRGMLPIE 136
A + VI D SK + P+E
Sbjct: 192 RAMIAQARQLTVIADSSKLERRGLFKVFPLE 222
>gi|116871728|ref|YP_848509.1| DeoR family transcriptional regulator [Listeria welshimeri serovar
6b str. SLCC5334]
gi|116740606|emb|CAK19726.1| transcriptional regulator, DeoR family [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 254
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ ++ VI S T
Sbjct: 77 EEKEMIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFSKLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|308173188|ref|YP_003919893.1| LacR [Bacillus amyloliquefaciens DSM 7]
gi|307606052|emb|CBI42423.1| LacR [Bacillus amyloliquefaciens DSM 7]
gi|328553891|gb|AEB24383.1| LacR [Bacillus amyloliquefaciens TA208]
Length = 253
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG 46
++ K A A YV DG T+ +G G+T + LLA + +
Sbjct: 76 QMEEKGKIAELAASYVNDGDTVFLGPGTT----IELLAQHLLHK 115
>gi|300362184|ref|ZP_07058361.1| lactose PTS family porter repressor [Lactobacillus gasseri JV-V03]
gi|300354803|gb|EFJ70674.1| lactose PTS family porter repressor [Lactobacillus gasseri JV-V03]
Length = 254
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ AA A + V DG T+ +G G+T + + L K
Sbjct: 80 KKAAAEVASKIVQDGETIYVGPGTTLEFMVAKLNQK 115
>gi|157150652|ref|YP_001450806.1| lactose phosphotransferase system repressor [Streptococcus gordonii
str. Challis substr. CH1]
gi|157075446|gb|ABV10129.1| Lactose phosphotransferase system repressor [Streptococcus gordonii
str. Challis substr. CH1]
Length = 251
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 26/141 (18%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A++A+Q + +G T+ +G G++ +LA++I+N + + K
Sbjct: 78 EAKRTVAKKAVQLIEEGDTIFLGPGTSV----EVLAEEISNQHLRVITNCLPIFNDLLKK 133
Query: 65 HHIPLHSPEDVSSV-----------------DLSID----GFDEIDSRLRLIKGYGGALL 103
+ + + I + + A
Sbjct: 134 KSDSFKVFLLGGEMRDATQAFVGEMTNALMDRMYFSKMFFSGNGIKDGQIMTSSFEEAYT 193
Query: 104 REKIIAHAASRFIVIGDESKR 124
+K+ + ++ D SK
Sbjct: 194 -QKLALERSKESYLLIDSSKV 213
>gi|311748606|ref|ZP_07722391.1| glucitol operon repressor [Algoriphagus sp. PR1]
gi|126577130|gb|EAZ81378.1| glucitol operon repressor [Algoriphagus sp. PR1]
Length = 253
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
++ K A RA+ ++ D + +G+G+T F +
Sbjct: 75 QVEEKNKIADRALAFLEDNEAILIGSGTTVVAFAQAI 111
>gi|20808349|ref|NP_623520.1| sugar metabolism transcriptional regulator [Thermoanaerobacter
tengcongensis MB4]
gi|254478384|ref|ZP_05091762.1| transcriptional regulator, DeoR family [Carboxydibrachium pacificum
DSM 12653]
gi|20516957|gb|AAM25124.1| Transcriptional regulator of sugar metabolism [Thermoanaerobacter
tengcongensis MB4]
gi|214035642|gb|EEB76338.1| transcriptional regulator, DeoR family [Carboxydibrachium pacificum
DSM 12653]
Length = 251
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSS---- 55
+ K+ A +A+ + +G + + GST + I N V S+
Sbjct: 76 EEKQRIAAKAVTEIKEGNVIFLDAGSTTYHIAKAIKSLKGITVITNALNVATELSTNPDI 135
Query: 56 --RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY--GGALLR---EKII 108
T K + + E V+ + + + ++ + +K +
Sbjct: 136 NLFITGGKLKHDNQSMVGFETVNCIGKYNIDILFLGTGGISVEKGLTTSDIFEAEAKKAM 195
Query: 109 AHAASRFIVIGDESKR 124
+ASR IV+ D SK
Sbjct: 196 IRSASRVIVVADSSKF 211
>gi|152977810|ref|YP_001343439.1| DeoR family transcriptional regulator [Actinobacillus succinogenes
130Z]
gi|150839533|gb|ABR73504.1| transcriptional regulator, DeoR family [Actinobacillus succinogenes
130Z]
Length = 252
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 15/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRVQVIP 53
+ K + A + + + + G+T E + ++ IAN V
Sbjct: 77 EQKEKIGKAAANLIPENCVVYLDAGTTTLEIAKYITEREDLLLVTNDFVIANYLMVNGKC 136
Query: 54 SSRN---TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI-IA 109
+ T N + + + + + + + L + + K I
Sbjct: 137 RLIHIGGTVNKANRSSVGELAAQALRQLSIDLAFISTSSWNLAGLTTPDEDKISVKRAII 196
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPI 135
A+ R +++ D SK + P+
Sbjct: 197 QASRRKVLVSDSSKYGKVATFSLFPL 222
>gi|258622048|ref|ZP_05717075.1| transcriptional regulator, DeoR family [Vibrio mimicus VM573]
gi|258585662|gb|EEW10384.1| transcriptional regulator, DeoR family [Vibrio mimicus VM573]
Length = 260
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 83 KLSLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 142
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 143 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLERGTTTFNELVGLS----K 198
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 199 VMAEVSREVIVMIESDKV 216
>gi|19704771|ref|NP_604333.1| DeoR family transcriptional regulator [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|19715101|gb|AAL95632.1| Transcriptional regulator, DeoR family [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 245
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 17/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL---------------LADKIANGFRVQV 51
K+ A+ A Q++ DG + + G+T E + L IAN +
Sbjct: 78 KKKIAKLAAQFISDGDYIYLDAGTTTYEIIDYMKGKDIKVVTNGIIHLEKLIANDIETYL 137
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
I + L + D + G + I+ AL +K
Sbjct: 138 IGGRIKKSTLAIVGVKALRDLSEF-RFDKAFIGINGINENGYSTHDIEEAL-IKKQAIDN 195
Query: 112 ASRFIVIGDESKR 124
+++ ++ D SK
Sbjct: 196 SNKAFILADSSKF 208
>gi|309389553|gb|ADO77433.1| transcriptional regulator, DeoR family [Halanaerobium praevalens
DSM 2228]
Length = 253
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 9/67 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ + A + + +G T+ + G+T + + L N + ++ T I+
Sbjct: 79 KKEIGKTAAEIIKNGDTIFIDAGTTTRYIIDNL----KNKKDLTIV-----THALHIINK 129
Query: 67 IPLHSPE 73
I +
Sbjct: 130 INEIDLD 136
>gi|229520796|ref|ZP_04410218.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
TM 11079-80]
gi|229342029|gb|EEO07025.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
TM 11079-80]
Length = 256
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 79 KISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 138
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESDKV 212
>gi|229507124|ref|ZP_04396630.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
BX 330286]
gi|229509040|ref|ZP_04398528.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
B33]
gi|229512546|ref|ZP_04402017.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
TMA 21]
gi|229519708|ref|ZP_04409151.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
RC9]
gi|229530327|ref|ZP_04419715.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
12129(1)]
gi|229606221|ref|YP_002876869.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
MJ-1236]
gi|229332100|gb|EEN97588.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
12129(1)]
gi|229344397|gb|EEO09372.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
RC9]
gi|229350439|gb|EEO15388.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
TMA 21]
gi|229353965|gb|EEO18899.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
B33]
gi|229355869|gb|EEO20789.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
BX 330286]
gi|229368876|gb|ACQ59299.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholerae
MJ-1236]
Length = 256
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 79 KISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 138
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESDKV 212
>gi|157692559|ref|YP_001487021.1| DeoR family transcriptional regulator [Bacillus pumilus SAFR-032]
gi|157681317|gb|ABV62461.1| DeoR family transcriptional regulator [Bacillus pumilus SAFR-032]
Length = 254
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 15/137 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIP----- 53
L K+ + A +V +G + + +G+T E + L DK + N
Sbjct: 73 QLSKKQLIGQTAAAFVENGDMIFVDSGTTTLEMLPYLTDKQVTVVTNNVDFITQAMPYEN 132
Query: 54 -SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR-----EKI 107
+ +T + + V + I S I +K
Sbjct: 133 MTIFSTGGMLERKTNSFVGYQSVERLKAYNVNKAFIASTGLSIDHGVTNSSPLETDIKKT 192
Query: 108 IAHAASRFIVIGDESKR 124
+ +++ ++ D+SK
Sbjct: 193 VVEKSAKTFLLVDDSKF 209
>gi|297580625|ref|ZP_06942551.1| transcriptional regulator [Vibrio cholerae RC385]
gi|297535041|gb|EFH73876.1| transcriptional regulator [Vibrio cholerae RC385]
Length = 260
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 83 KISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 142
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 143 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 198
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 199 VMAEVSREVIVMIESDKV 216
>gi|167745822|ref|ZP_02417949.1| hypothetical protein ANACAC_00516 [Anaerostipes caccae DSM 14662]
gi|167654853|gb|EDR98982.1| hypothetical protein ANACAC_00516 [Anaerostipes caccae DSM 14662]
Length = 252
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 26/138 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AA +A + DG T+ + +G+T M+ LA + + + V+ + +
Sbjct: 80 KQKAAAKARSMIKDGDTILLDSGTT----MLELAKLLKDAKNLTVVTNDLPVAMELQKME 135
Query: 67 IPLHSPEDVSSVDLSIDGF---------DEIDSRLRLIKGYGGALLRE------------ 105
V + + + I + G +L +
Sbjct: 136 GVYLILI-GGHVRTAFESTVGSMGMKFLENISVEKAFMSSDGVSLTKGATTPNMDQAEIK 194
Query: 106 KIIAHAASRFIVIGDESK 123
K + AA + ++ D SK
Sbjct: 195 KEMMAAADQNYLVCDTSK 212
>gi|225620683|ref|YP_002721941.1| D binding transcriptional repressor [Brachyspira hyodysenteriae
WA1]
gi|29126592|gb|AAO66588.1| hypothetical transcriptional repressor [Brachyspira hyodysenteriae]
gi|225215503|gb|ACN84237.1| D binding transcriptional repressor [Brachyspira hyodysenteriae
WA1]
Length = 255
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
+ K A++A + V D + + G+T + L
Sbjct: 76 ENKILIAKKAAELVEDNDIIFIDFGTTVLNIVDYLK 111
>gi|15640513|ref|NP_230140.1| DeoR family transcriptional regulator [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121591108|ref|ZP_01678418.1| transcriptional regulator, DeoR family [Vibrio cholerae 2740-80]
gi|121728927|ref|ZP_01681933.1| transcriptional regulator, DeoR family [Vibrio cholerae V52]
gi|147674087|ref|YP_001216012.1| DeoR family transcriptional regulator [Vibrio cholerae O395]
gi|153214955|ref|ZP_01949738.1| transcriptional regulator, DeoR family [Vibrio cholerae 1587]
gi|153801499|ref|ZP_01956085.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
gi|153819439|ref|ZP_01972106.1| transcriptional regulator, DeoR family [Vibrio cholerae NCTC 8457]
gi|153822186|ref|ZP_01974853.1| transcriptional regulator, DeoR family [Vibrio cholerae B33]
gi|153826574|ref|ZP_01979241.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-2]
gi|153828381|ref|ZP_01981048.1| transcriptional regulator, DeoR family [Vibrio cholerae 623-39]
gi|227080696|ref|YP_002809247.1| transcriptional regulator, DeoR family [Vibrio cholerae M66-2]
gi|254291197|ref|ZP_04961993.1| transcriptional regulator, DeoR family [Vibrio cholerae AM-19226]
gi|254850719|ref|ZP_05240069.1| transcriptional regulator [Vibrio cholerae MO10]
gi|298500984|ref|ZP_07010785.1| transcriptional regulator [Vibrio cholerae MAK 757]
gi|9654914|gb|AAF93659.1| transcriptional regulator, DeoR family [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121547055|gb|EAX57194.1| transcriptional regulator, DeoR family [Vibrio cholerae 2740-80]
gi|121628775|gb|EAX61239.1| transcriptional regulator, DeoR family [Vibrio cholerae V52]
gi|124115028|gb|EAY33848.1| transcriptional regulator, DeoR family [Vibrio cholerae 1587]
gi|124122990|gb|EAY41733.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
gi|126510010|gb|EAZ72604.1| transcriptional regulator, DeoR family [Vibrio cholerae NCTC 8457]
gi|126520321|gb|EAZ77544.1| transcriptional regulator, DeoR family [Vibrio cholerae B33]
gi|146315970|gb|ABQ20509.1| transcriptional regulator, DeoR family [Vibrio cholerae O395]
gi|148876090|gb|EDL74225.1| transcriptional regulator, DeoR family [Vibrio cholerae 623-39]
gi|149739666|gb|EDM53880.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-2]
gi|150422891|gb|EDN14842.1| transcriptional regulator, DeoR family [Vibrio cholerae AM-19226]
gi|227008584|gb|ACP04796.1| transcriptional regulator, DeoR family [Vibrio cholerae M66-2]
gi|227012339|gb|ACP08549.1| transcriptional regulator, DeoR family [Vibrio cholerae O395]
gi|254846424|gb|EET24838.1| transcriptional regulator [Vibrio cholerae MO10]
gi|297540232|gb|EFH76292.1| transcriptional regulator [Vibrio cholerae MAK 757]
Length = 260
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 83 KISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 142
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 143 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 198
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 199 VMAEVSREVIVMIESDKV 216
>gi|313900563|ref|ZP_07834056.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
gi|312954625|gb|EFR36300.1| transcriptional regulator, DeoR family [Clostridium sp. HGF2]
Length = 254
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 17/137 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K+ AR+A++++ D + M GST + LL AD I + +
Sbjct: 80 KQLIARKALEFIEDDAIVYMDPGSTCLQLAKLLRLKKNITVLTNSLPIADIICDSGLDLI 139
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDE-IDSRLRLIKGYGGALLREKIIAH 110
+ + + + + D +D++ G D +D + A + I+AH
Sbjct: 140 MTGGKLQKKGRALVGYYATNVIDTVRIDIAFMGCDGFMDMDGPMTFSMEHAEVNRHILAH 199
Query: 111 AASRFIVIGDESKRVDF 127
+ + I++ D SK
Sbjct: 200 -SRKNILLCDSSKFTKT 215
>gi|238922119|ref|YP_002935633.1| DeoR family transcriptional regulator, fructose operon
transcriptional repressor [Eubacterium eligens ATCC
27750]
gi|238873791|gb|ACR73499.1| DeoR family transcriptional regulator, fructose operon
transcriptional repressor [Eubacterium eligens ATCC
27750]
Length = 246
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ K+ A A + V + + G+T + + L +K A
Sbjct: 79 EEKKKIAMYAARLVAPNDFVYIDAGTTTEYLIDYLEEKNA 118
>gi|327472948|gb|EGF18375.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK408]
Length = 247
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 40/135 (29%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICRTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F + GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVGHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 EASDQMIVLTDSSKF 206
>gi|239624456|ref|ZP_04667487.1| transcriptional regulator [Clostridiales bacterium 1_7_47_FAA]
gi|239520842|gb|EEQ60708.1| transcriptional regulator [Clostridiales bacterium 1_7_47FAA]
Length = 247
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
K AR A Q V DG + + +G+T + + L +K R+ V+ ++
Sbjct: 80 KEAIARTAAQLVHDGEVIYIDSGTTCLKMISYLKNK-----RITVVTTNA 124
>gi|195940498|ref|ZP_03085880.1| hypothetical protein EscherichcoliO157_29585 [Escherichia coli
O157:H7 str. EC4024]
Length = 266
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 38/139 (27%), Gaps = 22/139 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A Y+ DG T+ + G+T + L + + + S R K
Sbjct: 81 EEKRAIAEAIADYIPDGSTIFITIGTTVEHVARAL---LNHNHLRIITNSLRVAHILYKN 137
Query: 65 HHIPLHSPEDVSSVD-------------------LSIDGFDEIDSRLRLIKGYGGALLRE 105
+ P + I+ +++
Sbjct: 138 PRFEVMVPGGTLRPHNGGIIGPAATAFVSGFRADYLVTSVGAIEHDGAMMEFDVNEASVV 197
Query: 106 KIIAHAASRFIVIGDESKR 124
K + + ++ D +K
Sbjct: 198 KTMMAHSRHILLAADHTKY 216
>gi|126738098|ref|ZP_01753819.1| transcriptional regulator, DeoR family protein [Roseobacter sp.
SK209-2-6]
gi|126720595|gb|EBA17300.1| transcriptional regulator, DeoR family protein [Roseobacter sp.
SK209-2-6]
Length = 258
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV 51
K A++A+ ++ DG T+ + GST L ++ + V
Sbjct: 77 KARIAQQAMHHIPDGATVFLDVGSTTSYVAEAL--RLRHNLTVVT 119
>gi|160936556|ref|ZP_02083923.1| hypothetical protein CLOBOL_01446 [Clostridium bolteae ATCC
BAA-613]
gi|158440347|gb|EDP18092.1| hypothetical protein CLOBOL_01446 [Clostridium bolteae ATCC
BAA-613]
Length = 234
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
+ K AR+A V DG + + +G+T + L G R+ ++ SS
Sbjct: 77 EEKEIIARKAAALVEDGDCVYVDSGTTTVGMLKYL-----QGKRITIVSSS 122
>gi|67902792|ref|XP_681652.1| hypothetical protein AN8383.2 [Aspergillus nidulans FGSC A4]
gi|40747849|gb|EAA67005.1| hypothetical protein AN8383.2 [Aspergillus nidulans FGSC A4]
gi|259484315|tpe|CBF80428.1| TPA: polyketide synthase, putative (JCVI) [Aspergillus nidulans FGSC
A4]
Length = 2476
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 24 LGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC-KIHHIPLHSPEDVSSVDLSI 82
+G GTG T + LA G R Q + ++ + +++D+
Sbjct: 1940 IGAGTGGTTNYLVQELAAVP--GLRFQYTFTDISSSLVTLARKRFKAYDFMRYTTLDIEN 1997
Query: 83 DGFDEIDSRLRLIKGYGGALLREKIIAHAAS 113
D E+ + +I +I +
Sbjct: 1998 DPSPELQGQYDIIISTNCIHATRNLITSCTN 2028
>gi|255744268|ref|ZP_05418221.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholera
CIRS 101]
gi|262147269|ref|ZP_06028069.1| transcriptional regulator of GlmS, DeoR family [Vibrio cholerae
INDRE 91/1]
gi|262167120|ref|ZP_06034834.1| transcriptional regulator of GlmS, DeoR family [Vibrio cholerae
RC27]
gi|262191135|ref|ZP_06049339.1| transcriptional regulator of GlmS, DeoR family [Vibrio cholerae CT
5369-93]
gi|255738208|gb|EET93600.1| transcriptional regulator of glmS gene DeoR family [Vibrio cholera
CIRS 101]
gi|262024420|gb|EEY43107.1| transcriptional regulator of GlmS, DeoR family [Vibrio cholerae
RC27]
gi|262031299|gb|EEY49913.1| transcriptional regulator of GlmS, DeoR family [Vibrio cholerae
INDRE 91/1]
gi|262032991|gb|EEY51525.1| transcriptional regulator of GlmS, DeoR family [Vibrio cholerae CT
5369-93]
gi|327483336|gb|AEA77743.1| Transcriptional regulator of glmS gene, DeoR family [Vibrio
cholerae LMA3894-4]
Length = 234
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 57 KISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 116
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 117 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 172
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 173 VMAEVSREVIVMIESDKV 190
>gi|269103800|ref|ZP_06156497.1| putative transcriptional regulator DeoR family protein
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163698|gb|EEZ42194.1| putative transcriptional regulator DeoR family protein
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 255
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K A+ A + + D + + +GST + LL K +AN
Sbjct: 79 KVAIAQEAEKRIRDHNRIIVDSGSTTAALISLLGRKQGLIVMTNSLQVANALNELENEPT 138
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + +
Sbjct: 139 LLMTGGTWDPHSESFQGQVAESVLRSYDFDQLFIGADGIDIARGTTTFNELIGLS----R 194
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A + +V+ + SK + +P
Sbjct: 195 VMAEVSREVVVMVESSKIGRKIPNLEIP 222
>gi|119774330|ref|YP_927070.1| GlpR family transcriptional regulator [Shewanella amazonensis SB2B]
gi|119766830|gb|ABL99400.1| transcriptional regulator, DeoR family [Shewanella amazonensis
SB2B]
Length = 260
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 47/146 (32%), Gaps = 16/146 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTEN 60
+KR A V +G L + +G+T ++ L + NG + + S ++
Sbjct: 81 LKRELGAAAASLVQNGDRLLLDSGTTTEQVAHHLMQHEDLIVMTNGLNIASVLSKSDSVE 140
Query: 61 ------FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE-----KIIA 109
+ + + S+ + +K + +++
Sbjct: 141 VMLTGGLLRKKSMSFYGSAAEKSLGDYNFNKLILGVDGFDLKAGLTTHFEKEACLNRMMV 200
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPI 135
A+ IV+ D SK + P+
Sbjct: 201 DIATEVIVVTDSSKFDQQAFHVICPL 226
>gi|328945300|gb|EGG39453.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1087]
Length = 247
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICRTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 DASDQMIVLTDSSKF 206
>gi|308068923|ref|YP_003870528.1| transcriptional regulator yulB [Paenibacillus polymyxa E681]
gi|305858202|gb|ADM69990.1| Putative HTH-type transcriptional regulator yulB [Paenibacillus
polymyxa E681]
Length = 252
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 26/144 (18%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANG 46
M+A + KR A A++ + + + +TA L A ++A
Sbjct: 74 MNAEE-KRRIAEEAVKQIQPNDRILLDASTTAWYMASSLPDIPLTILTNSIRVATELAGK 132
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPE----DVSSVDLSIDGF--DEIDSRLRLIKGYGG 100
+++VI + PL V + S G D S ++
Sbjct: 133 EKIEVISTGGQLLQRSLSFVGPLAERSLETYYVDKLFFSSQGVHLDRGISESNELQAR-- 190
Query: 101 ALLREKIIAHAASRFIVIGDESKR 124
L++K++ A R I++ D SK
Sbjct: 191 --LKQKMV-SIADRVILLADASKF 211
>gi|262171896|ref|ZP_06039574.1| transcriptional repressor of aga operon [Vibrio mimicus MB-451]
gi|261892972|gb|EEY38958.1| transcriptional repressor of aga operon [Vibrio mimicus MB-451]
Length = 221
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 29/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 38 KQMIAFAAAQLIGDGEAIILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNENVELH 97
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLR 104
V R + + H + L +DGFD +
Sbjct: 98 VIGGSLRRASCSLTGHHGEHQIRSYLFDKLFLGVDGFDLQAGITTPDNHEAQ-------V 150
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 151 NRAMCDVARQIIAVTDSSKF 170
>gi|261342580|ref|ZP_05970438.1| glucitol operon repressor [Enterobacter cancerogenus ATCC 35316]
gi|288315227|gb|EFC54165.1| glucitol operon repressor [Enterobacter cancerogenus ATCC 35316]
Length = 267
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 26/139 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN--------- 57
KR+ A+ A V G + + +G+T +A + V + + N
Sbjct: 93 KRSIAQAAAGLVKPGHRIILDSGTTTF----EIARMLRQHTDVIAMTNGMNVANALLEAD 148
Query: 58 ------TENFCKIHHIPLHSPEDVSSVDLS-----IDGFDEIDSRLRL-IKGYGGALLRE 105
T + + + S+ G D ID + A L
Sbjct: 149 GVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDLLFLGVDAIDLDRGVSTHNEDEARLNR 208
Query: 106 KIIAHAASRFIVIGDESKR 124
K+ A R IV+ D SK
Sbjct: 209 KMCE-VAERIIVVTDSSKF 226
>gi|261404112|ref|YP_003240353.1| DeoR family transcriptional regulator [Paenibacillus sp. Y412MC10]
gi|261280575|gb|ACX62546.1| transcriptional regulator, DeoR family [Paenibacillus sp. Y412MC10]
Length = 251
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 25/154 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------- 54
L+ K AR+ ++V DG + + +GST +A + + ++ V+ +
Sbjct: 71 SQLEEKDRIARKCSEFVHDGDCIYIDSGSTTY----QIAKYVKHKKKLTVVTNSLPVAIE 126
Query: 55 -------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
E + + + + +++ + I + A
Sbjct: 127 LMDSDVELIMIGGKIRREEQSVVAYEYIFNFHELNVLKAFICCSGITIEKGISDYNLEEA 186
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ R+K+I + IV+ D +K + + P+
Sbjct: 187 ITRKKMIE-LSKEVIVMADSTKFGKDITISIAPL 219
>gi|315180550|gb|ADT87464.1| transcriptional regulator of sugar metabolism [Vibrio furnissii
NCTC 11218]
Length = 263
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 39/136 (28%), Gaps = 21/136 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 80 KQMIALAAAQLISDGEAVILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNDNVELH 139
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
V R + + H + L +DGFD A + + +
Sbjct: 140 VIGGSLRRASCSLTGHHGEQHIRSYLFDKLFLGVDGFD--LHAGITTPDSHEAQVN-RAM 196
Query: 109 AHAASRFIVIGDESKR 124
A + I + D SK
Sbjct: 197 CDVARQVIAVTDSSKF 212
>gi|258626967|ref|ZP_05721768.1| transcriptional regulator, DeoR family [Vibrio mimicus VM603]
gi|258580747|gb|EEW05695.1| transcriptional regulator, DeoR family [Vibrio mimicus VM603]
Length = 256
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 79 KFSLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 138
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESDKV 212
>gi|242372772|ref|ZP_04818346.1| DeoR family transcriptional regulator [Staphylococcus epidermidis
M23864:W1]
gi|242349545|gb|EES41146.1| DeoR family transcriptional regulator [Staphylococcus epidermidis
M23864:W1]
Length = 265
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 21/148 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--PSSRN-- 57
K ++A ++V DG TL + +GST +F + K I N + + ++
Sbjct: 89 KLGIGQKAAEFVNDGDTLIIDSGSTTLQFARAIVHKQNLTVITNDIHIASVLRSTNHRVI 148
Query: 58 -------TENFCKIHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGALLREKII 108
N+ I + + +S+ ++ D + + + A ++ +
Sbjct: 149 VTGGVLYHNNYVLNGFITTQTLQSFNSMKAFIATPALDAVKGMTHYSEEFIAA---KRQM 205
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIE 136
A ++ D +K + PIE
Sbjct: 206 VEQAHEVYLLTDSTKLDKVAFYQVSPIE 233
>gi|92115396|ref|YP_575324.1| DeoR family transcriptional regulator [Chromohalobacter salexigens
DSM 3043]
gi|91798486|gb|ABE60625.1| transcriptional regulator, DeoR family [Chromohalobacter salexigens
DSM 3043]
Length = 256
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
KR AR A + + + + +G+T + L + +AN R
Sbjct: 78 KRAIARAASERIRAHNRIIIDSGTTTSAMIPELGGREGLVVMTNALSVANALRDVEPEPA 137
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D R Y L +
Sbjct: 138 ILMTGGTWDPHSESFQGQVAEQVLRFYDFDQLFIGADGIDL----ERGTTTYNELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A +V+ + K + LP
Sbjct: 194 VMAEVAREVVVLAESDKIGRRIPNLELP 221
>gi|229083823|ref|ZP_04216134.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-44]
gi|228699480|gb|EEL52154.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-44]
Length = 262
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 22/142 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A + V D + + G+T + + + DK IP+ +
Sbjct: 80 EEKRKIAMEASKLVEDNDIIAIEIGTTTMQVLDFIHDKKNLTILTNSIPAVNQIIELKEQ 139
Query: 65 HH----------------------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ + + D +V+ D I L Y
Sbjct: 140 YDSFDCKLIVFGGMLNSNSLALSGDMMLNYLDHFTVNKLFASCDGISLEKELTCSYIEDA 199
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + A + +++ DESK
Sbjct: 200 QVFQQLKKNAKQVVMMVDESKF 221
>gi|18310287|ref|NP_562221.1| transcriptional regulator [Clostridium perfringens str. 13]
gi|18144967|dbj|BAB81011.1| probable transcriptional regulator [Clostridium perfringens str.
13]
Length = 359
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 2 DALQMKRNAARRAIQY----VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
D +K + A Y + DG T+ + GST KE + L + +AN V V+P+
Sbjct: 135 DENTIKEL-GKAAANYSKNIIKDGYTIAVTGGSTVKEVIDELPE-MANLKNVLVVPAR 190
>gi|262403887|ref|ZP_06080444.1| transcriptional regulator of GlmS, DeoR family [Vibrio sp. RC586]
gi|262349849|gb|EEY98985.1| transcriptional regulator of GlmS, DeoR family [Vibrio sp. RC586]
Length = 234
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 57 KMSLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 116
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 117 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLERGTTTFNELVGLS----K 172
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 173 VMAEVSREVIVMIESDKV 190
>gi|260768847|ref|ZP_05877781.1| transcriptional repressor of aga operon [Vibrio furnissii CIP
102972]
gi|260616877|gb|EEX42062.1| transcriptional repressor of aga operon [Vibrio furnissii CIP
102972]
Length = 263
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 39/136 (28%), Gaps = 21/136 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 80 KQMIALAAAQLISDGEAVILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNDNVELH 139
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
V R + + H + L +DGFD A + + +
Sbjct: 140 VIGGSLRRASCSLTGHHGEQHIRSYLFDKLFLGVDGFD--LHAGITTPDSHEAQVN-RAM 196
Query: 109 AHAASRFIVIGDESKR 124
A + I + D SK
Sbjct: 197 CDVARQVIAVTDSSKF 212
>gi|328905809|gb|EGG25585.1| transcriptional regulator, DeoR family [Propionibacterium sp. P08]
Length = 252
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 20/137 (14%)
Query: 9 NAARRAIQ-----YVVDGMTLGMGTGSTAKEFMILLADKIANGFR-------------VQ 50
A + AI V D M++ + GST L ++ V
Sbjct: 75 AAGKAAIAQLVSRLVTDDMSVIIDNGSTMVAVAQALQERPITALCLSLRAALSLGEGGVA 134
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVS--SVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + T + + + D++I G + L L ++ I
Sbjct: 135 TVSTPDGTLMPESLRYEAASCLRALGAFRADVAIIGTCSASPAMGLTVTTHQDALVKRAI 194
Query: 109 AHAASRFIVIGDESKRV 125
+++R I+ K
Sbjct: 195 LASSARVILAATSDKLS 211
>gi|169334778|ref|ZP_02861971.1| hypothetical protein ANASTE_01184 [Anaerofustis stercorihominis DSM
17244]
gi|169257516|gb|EDS71482.1| hypothetical protein ANASTE_01184 [Anaerofustis stercorihominis DSM
17244]
Length = 256
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 50/147 (34%), Gaps = 15/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRV----------- 49
+ K + A + V +G T+ + +GST + + DK I N ++
Sbjct: 82 EEKERIGKAAAKLVEEGNTVIIDSGSTPYHVVPNILDKEVMVITNDVKIAYKLALDSKAK 141
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ ++ + + + + D + G D +D + ++ +
Sbjct: 142 VLVAGGYIEKSVFSLLGPTSEALFENTHADFAFIGLDGMDIEYGASVKSFTEMPVKQAMI 201
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A + + D SK + +E
Sbjct: 202 RNADKVAAVMDSSKLKQKMLVKFAEVE 228
>gi|163841522|ref|YP_001625927.1| DeoR family transcriptional regulator [Renibacterium salmoninarum
ATCC 33209]
gi|162954998|gb|ABY24513.1| transcriptional regulator, DeoR family [Renibacterium salmoninarum
ATCC 33209]
Length = 258
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 46/173 (26%), Gaps = 30/173 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI--------PSSRNT 58
K AR A V +GM +G+ G+T L + S NT
Sbjct: 80 KEAIARSAASLVEEGMAVGLSAGTTTWTLAKYLVPAKRLTIFTNSVRVANVFHEAHSSNT 139
Query: 59 ENFCKIHHIPLHSPE--------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
P + +D+ G +D+ ++ +
Sbjct: 140 VLLTGGERTPSDALVGPMATQSLQHLHLDMLFMGVHGMDAHAGFTTPNMPEAEMDRALIA 199
Query: 111 AASRFIVIGDESKR----VDFLGRGM----------LPIEIDQFGVNKTLSAL 149
+ R +V+ D SK V + LP E F +
Sbjct: 200 TSHRVVVLADHSKWGTLGVSSIASFDQIDEMISDEGLPAEAVSFLTGQVRRLW 252
>gi|325261151|ref|ZP_08127889.1| transcriptional regulator, DeoR family [Clostridium sp. D5]
gi|324032605|gb|EGB93882.1| transcriptional regulator, DeoR family [Clostridium sp. D5]
Length = 259
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 18/154 (11%)
Query: 1 MDALQMK---RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK--IANGFRVQVIPSS 55
M+ ++K A+ A V DG T+ + T +TA + + + DK I + I +
Sbjct: 66 MEQDEVKLYRERIAQYAASLVEDGDTIFINTSATALQMIKYIRDKRVIVITNNGKAIYTE 125
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL------------- 102
+++ + L ++ + + + ++ ++ I G +L
Sbjct: 126 HSSKVSVILSGGELREIKEAMVGEFASNNISKVTAKKSFIGCSGLSLESGMTTEILSEVN 185
Query: 103 LREKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + ++ ++ D +K P E
Sbjct: 186 INQLMLQRVTDTSYILADHTKIGRNSSFVSCPTE 219
>gi|310641856|ref|YP_003946614.1| transcriptional regulator yulb [Paenibacillus polymyxa SC2]
gi|309246806|gb|ADO56373.1| Probable transcriptional regulator YulB [Paenibacillus polymyxa
SC2]
Length = 252
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 26/144 (18%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANG 46
M+A + KR A A++ + + + +TA L A ++A
Sbjct: 74 MNAEE-KRRIAEEAVKQIQPHDRILLDASTTAWYMASSLPDIPLTILTNSIRVATELAGK 132
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPE----DVSSVDLSIDGF--DEIDSRLRLIKGYGG 100
+++VI + PL V + S G D S ++
Sbjct: 133 EKIEVISTGGQLLQRSLSFVGPLAERSLETYYVDKLFFSSQGVHLDRGISESNELQAR-- 190
Query: 101 ALLREKIIAHAASRFIVIGDESKR 124
L++K++ A R I++ D SK
Sbjct: 191 --LKQKMV-SIADRVILLADASKF 211
>gi|258626289|ref|ZP_05721136.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM603]
gi|258581341|gb|EEW06243.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM603]
Length = 262
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 29/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 79 KQMIAFAAAQLIGDGEAIILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNENVELH 138
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLR 104
V R + + H + L +DGFD +
Sbjct: 139 VIGGSLRRASCSLTGHHGEHQIRSYLFDKLFLGVDGFDLQAGITTPDNHEAQ-------V 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 192 NRAMCDVARQIIAVTDSSKF 211
>gi|170696746|ref|ZP_02887859.1| transcriptional regulator, DeoR family [Burkholderia graminis
C4D1M]
gi|170138347|gb|EDT06562.1| transcriptional regulator, DeoR family [Burkholderia graminis
C4D1M]
Length = 251
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RA Q+V DG +L + +GST + L D+
Sbjct: 76 AKRAIGERAAQFVPDGASLIVDSGSTTQAVARALLDRHR 114
>gi|319784967|ref|YP_004144443.1| DeoR family transcription regulator [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170855|gb|ADV14393.1| regulatory protein DeoR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 264
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 24/143 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K R A V DGM + + +G+T +AD S + C +
Sbjct: 87 KAAIGRLAAGLVKDGMVVFLDSGTTTLAVAQAMADL---RDLTICTASLKIALLLCHVSG 143
Query: 67 IPLHSP-EDVS------------------SVDLSIDGFDEIDSRLRLIK-GYGGALLREK 106
+ +H +V VD++ G + + GA R +
Sbjct: 144 MRVHVLGGEVDPGEEAASGIDMLEAMSRFRVDIAFLGGGALSPDGEVTDFTRAGAEQRSR 203
Query: 107 IIAHAASRFIVIGDESKRVDFLG 129
+IA AA + + D SK
Sbjct: 204 MIALAAKTY-FVLDSSKFAKLTP 225
>gi|323127901|gb|ADX25198.1| Lactose phosphotransferase system repressor [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 256
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ KR A A Q V DG T+ +G G+T + F L ++ R+ T
Sbjct: 76 QTKEKRELASYATQLVNDGETIFIGPGTTLEFFAEQLKNR---KIRIVTNSLPVFTILQD 132
Query: 63 KIHHIPLHSPEDVSSVDLSIDGF 85
+ + S+ + G
Sbjct: 133 SETVDLILIGGEYRSITGAFVGS 155
>gi|313900122|ref|ZP_07833622.1| putative HTH-type transcriptional regulator IolR [Clostridium sp.
HGF2]
gi|312955174|gb|EFR36842.1| putative HTH-type transcriptional regulator IolR [Clostridium sp.
HGF2]
Length = 253
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+ K+ A+ A V D L + +GST L
Sbjct: 77 EEKQRIAKYAAALVNDNDLLYIDSGSTTSLLTDYLHR 113
>gi|294783070|ref|ZP_06748394.1| lactose phosphotransferase system repressor [Fusobacterium sp.
1_1_41FAA]
gi|294479948|gb|EFG27725.1| lactose phosphotransferase system repressor [Fusobacterium sp.
1_1_41FAA]
Length = 244
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 17/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL---------------LADKIANGFRVQV 51
K+ A+ A Q++ DG + + G+T E + L IAN +
Sbjct: 78 KKKIAQVAAQFISDGDYIYLDAGTTTYEIIDYMKGKDIKVVTNGIIHLERLIANDIETYL 137
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
I + L + D + G + I+ AL +K
Sbjct: 138 IGGRIKKSTLAIVGVKALRDLSEF-RFDKAFIGINGINENGYSTHDVEEAL-IKKQAIEN 195
Query: 112 ASRFIVIGDESKR 124
+++ ++ D +K
Sbjct: 196 SNKAFILADSTKF 208
>gi|251783159|ref|YP_002997464.1| lactose phosphotransferase system repressor [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242391791|dbj|BAH82250.1| lactose phosphotransferase system repressor [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 256
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ KR A A Q V DG T+ +G G+T + F L ++ R+ T
Sbjct: 76 QTKEKRELASYATQLVNDGETIFIGPGTTLEFFAEQLKNR---KIRIVTNSLPVFTILQD 132
Query: 63 KIHHIPLHSPEDVSSVDLSIDGF 85
+ + S+ + G
Sbjct: 133 SETVDLILIGGEYRSITGAFVGS 155
>gi|322412478|gb|EFY03386.1| Lactose phosphotransferase system repressor [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 256
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ KR A A Q V DG T+ +G G+T + F L ++ R+ T
Sbjct: 76 QTKEKRELASYATQLVNDGETIFIGPGTTLEFFAEQLKNR---KIRIVTNSLPVFTILQD 132
Query: 63 KIHHIPLHSPEDVSSVDLSIDGF 85
+ + S+ + G
Sbjct: 133 SETVDLILIGGEYRSITGAFVGS 155
>gi|152976112|ref|YP_001375629.1| DeoR family transcriptional regulator [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024864|gb|ABS22634.1| transcriptional regulator, DeoR family [Bacillus cytotoxicus NVH
391-98]
Length = 249
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q KR A A V G + + GST E + L +K + N R
Sbjct: 77 QEKRAIASLAASLVEKGDCIYLDAGSTTFEMIPYLINKDVTVVTNGLMHIEALVENHIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ ++ I + S + D G + + +L L +K+
Sbjct: 137 YLLGGMMKSQTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGYTTPDPEEALLKKMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + IE
Sbjct: 196 TLANEGYFLVDESKFSEVAFAKIANIE 222
>gi|262273108|ref|ZP_06050925.1| transcriptional regulator of GlmS, DeoR family [Grimontia hollisae
CIP 101886]
gi|262222864|gb|EEY74172.1| transcriptional regulator of GlmS, DeoR family [Grimontia hollisae
CIP 101886]
Length = 254
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 24/154 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIAN---- 45
+ K + A+ A + D + + +GST + LL A I
Sbjct: 76 EQKLSIAKMAAARIRDHNRIVIDSGSTTAALIPLLNQKRGLVVMTNSLTVAQAIKELENE 135
Query: 46 -GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ ++E F D + + DG D +
Sbjct: 136 PTLLMTGGTWDPHSEAFQGQVAEQALRSYDFDQLFIGADGIDVSRGTTTF----NEIVGL 191
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPIEID 138
+++A + +V+ + K + LP E
Sbjct: 192 SRVMAEVSREVVVLIESEKIGRKIPNLELPWEAI 225
>gi|259417256|ref|ZP_05741175.1| transcriptional regulator, DeoR family [Silicibacter sp. TrichCH4B]
gi|259346162|gb|EEW57976.1| transcriptional regulator, DeoR family [Silicibacter sp. TrichCH4B]
Length = 274
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
K+ A V DG + +GTG+T + +LA +
Sbjct: 90 KQQIAIAVKSLVGDGSRVALGTGTTVEACARILAATCKD 128
>gi|83952675|ref|ZP_00961405.1| transcriptional regulator, DeoR family protein [Roseovarius
nubinhibens ISM]
gi|83835810|gb|EAP75109.1| transcriptional regulator, DeoR family protein [Roseovarius
nubinhibens ISM]
Length = 265
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 44/159 (27%), Gaps = 24/159 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI-----PSSRNTENF 61
K A A + +G + + GST L N + V+ P+
Sbjct: 85 KTLIASTAAGLIPNGACVFLDVGSTTAFVAEAL----RNHSDLTVVTNGLHPAQSLMRRN 140
Query: 62 CKIHHIPLHSPEDVS---------------SVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ +V ++D+++ D ID + +
Sbjct: 141 GNTVWLAGGELREVEAGTFGNTALDFVGRFNIDMAVLSIDGIDPASGFLLAGAAEAELAR 200
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLPIEIDQFGVNKT 145
+ A R +V+ D SK P + V
Sbjct: 201 AVVSRAKRSLVVADHSKFGQTAPIVACPPDAIDMLVTDV 239
>gi|86148099|ref|ZP_01066399.1| transcriptional regulator, DeoR family protein [Vibrio sp. MED222]
gi|85834086|gb|EAQ52244.1| transcriptional regulator, DeoR family protein [Vibrio sp. MED222]
Length = 256
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + D + + +GST + L K +AN ++ P+
Sbjct: 79 KISLAKAAADLIRDHNRIVIDSGSTTGALIQQLNSKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++++F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSDSFQGKVAESVLRAYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMVESEKV 212
>gi|332289300|ref|YP_004420152.1| DNA-binding transcriptional activator FucR [Gallibacterium anatis
UMN179]
gi|330432196|gb|AEC17255.1| DNA-binding transcriptional activator FucR [Gallibacterium anatis
UMN179]
Length = 250
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 49/135 (36%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD--------------KIANGFRVQ 50
+ K+ A++ ++Y+ +G+ +G+ ST+ LL D + N ++
Sbjct: 75 EAKKTIAQQVVEYIYEGVVVGLDASSTSWYVAQLLPDIPCSVVTNSMRNITALVNKPNIK 134
Query: 51 VIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I + + PL + + I +D+ + + ++ +
Sbjct: 135 TIATGGVYSAKYDAFYGPLSEHLLSRLHIHIGIFSCVGVDNEGGIWESNELNASMKRKMM 194
Query: 110 HAASRFIVIGDESKR 124
+ + ++ D SK
Sbjct: 195 DMSEQKFLLVDPSKF 209
>gi|261210064|ref|ZP_05924362.1| transcriptional regulator of GlmS, DeoR family [Vibrio sp. RC341]
gi|260840829|gb|EEX67371.1| transcriptional regulator of GlmS, DeoR family [Vibrio sp. RC341]
Length = 243
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 66 KISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 125
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 126 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 181
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 182 VMAEVSREVIVMIESDKV 199
>gi|156933756|ref|YP_001437672.1| hypothetical protein ESA_01582 [Cronobacter sakazakii ATCC BAA-894]
gi|156532010|gb|ABU76836.1| hypothetical protein ESA_01582 [Cronobacter sakazakii ATCC BAA-894]
Length = 266
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
M+ +KR A A V DG T+ + GST LA++
Sbjct: 82 MNNFALKRRLADFACSLVNDGETVFIENGSTNALLARALAEQKK 125
>gi|146297439|ref|YP_001181210.1| DeoR family transcriptional regulator [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411015|gb|ABP68019.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 252
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 21/147 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEF---MIL-----------LADKIANGFRVQVI 52
K + A +Y+ DG T+ + +G+T + + +A++++N ++VI
Sbjct: 79 KEYIGKLAAKYIEDGDTIILDSGTTTQYIARNIKAKNVIVITNSVNIANELSNREDIEVI 138
Query: 53 PS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ T+ + + + + ++ +
Sbjct: 139 VTGGVIRSKTKALVGDITQSTLKQFRCDK---AFIAANGVSIEFGVTTPTHLEAAVKRTM 195
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPI 135
A ++ D SK + P+
Sbjct: 196 IENAKEVFLVADSSKFGQVTFALICPV 222
>gi|117620653|ref|YP_855604.1| DeoR family transcriptional regulator [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562060|gb|ABK39008.1| transcriptional regulator, DeoR family [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 263
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 30/109 (27%), Gaps = 15/109 (13%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K A A V G ++ + G+T+ E LA + + ++ +
Sbjct: 76 QEAKLAIAHSAAAQVEPGSSVYLDAGTTSLELARELAQR----EDLMIVTNDF------- 124
Query: 64 IHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
+ + L G I G A + A
Sbjct: 125 ---MVCAYLIEHGRCRLYHTGGQVIRENQSC-AGEATAHFLRNLHLDVA 169
>gi|296105426|ref|YP_003615572.1| hypothetical protein ECL_05101 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059885|gb|ADF64623.1| hypothetical protein ECL_05101 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 266
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 38/139 (27%), Gaps = 22/139 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A Y+ DG T+ + G+T + L + + + S R K
Sbjct: 81 EEKRAIAEAIADYIPDGSTIFITIGTTVEHVARAL---LNHNHLRIITNSLRVAHILYKN 137
Query: 65 HHIPLHSPEDVSSVD-------------------LSIDGFDEIDSRLRLIKGYGGALLRE 105
+ P + I+ +++
Sbjct: 138 PRFEVMVPGGTLRPHNGGIIGPAATAFVSGFRADYLVTSVGAIEHDGAMMEFDVNEASVV 197
Query: 106 KIIAHAASRFIVIGDESKR 124
K + A ++ D +K
Sbjct: 198 KTMMAHARHILLAADHTKY 216
>gi|259909144|ref|YP_002649500.1| DeoR-family transcriptional regulatory protein [Erwinia pyrifoliae
Ep1/96]
gi|224964766|emb|CAX56283.1| DeoR-family transcriptional regulatory protein [Erwinia pyrifoliae
Ep1/96]
gi|283479176|emb|CAY75092.1| Uncharacterized HTH-type transcriptional regulator yulB [Erwinia
pyrifoliae DSM 12163]
gi|310766955|gb|ADP11905.1| DeoR-family transcriptional regulatory protein [Erwinia sp. Ejp617]
Length = 253
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 48/150 (32%), Gaps = 16/150 (10%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M +++ K+ A +++ + + G+T L + IA+
Sbjct: 74 MYSME-KQAIGVAAARHIPRNSCIYLDAGTTTLALARELGTRDDLLIVTNDFVIADLLID 132
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG----YGGALLRE 105
+T ++ ++ I + ++G + +
Sbjct: 133 SSQCRMIHTGGKLCRNNRSCIGEAAAQTLRGLSLDIAFISASCWGMRGIFTPDEEKIAIK 192
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
+ ++ +S+ +++ D SK LP+
Sbjct: 193 RTVSDISSKRVLLADSSKYNKIATFLALPL 222
>gi|325261664|ref|ZP_08128402.1| transcriptional regulator of sugar metabolism [Clostridium sp. D5]
gi|324033118|gb|EGB94395.1| transcriptional regulator of sugar metabolism [Clostridium sp. D5]
Length = 265
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 48/139 (34%), Gaps = 19/139 (13%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+Q K ++A ++ +G T+ + +G+T + + D A + + + N
Sbjct: 89 MQYKLAIGKKAASFIKEGDTIFLDSGTTTIQLIKYFPDVHATLITNSLSAIQQLSTNRKI 148
Query: 64 IHHIPLHSPEDVSSVDLSIDGFD-EIDSRLRLIKGYGGALLR----------------EK 106
+ + ++ + ++D E + K + G L +K
Sbjct: 149 RLIVAPGTYQE--QIGGTLDLSTIEFCRHYHVDKSFVGTLFCSLDFGITTTDELDAALKK 206
Query: 107 IIAHAASRFIVIGDESKRV 125
++ ++ D +K
Sbjct: 207 TFCAQSTCSFLMADHTKFS 225
>gi|296104850|ref|YP_003614996.1| DNA-binding transcriptional regulator AgaR [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295059309|gb|ADF64047.1| DNA-binding transcriptional regulator AgaR [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 269
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 18/135 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
KR+ A+ A + V G + + +G+T E +L A+ + V++
Sbjct: 93 KRSIAKVAAELVKPGHRIILDSGTTTFEIARMLRQHTDVIAMTNGMNVANALLEAEGVEL 152
Query: 52 IPSSRNTENFCKIHHIPLHSPE-DVSSVDLSIDGFDEIDSRLRL-IKGYGGALLREKIIA 109
+ + + + + DL G D ID + A L ++
Sbjct: 153 LMTGGHLRRQSQSFYGDQAEQSLQNYHFDLLFLGVDAIDLDRGVSTHNEDEARLNRRMCE 212
Query: 110 HAASRFIVIGDESKR 124
A R IV+ D SK
Sbjct: 213 -VAERIIVVTDSSKF 226
>gi|156977606|ref|YP_001448512.1| hypothetical protein VIBHAR_06394 [Vibrio harveyi ATCC BAA-1116]
gi|156529200|gb|ABU74285.1| hypothetical protein VIBHAR_06394 [Vibrio harveyi ATCC BAA-1116]
Length = 250
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ + K+ A ++ + +G TL +G G+T +A+++AN ++V+ ++ +
Sbjct: 75 NQQE-KQTIADEVVKAIPNGSTLFLGIGTTIAL----IAERLANHSELRVVTNNFEAAHI 129
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
H + + + + D +D L G A
Sbjct: 130 L-SHFENIETWIPGGRIRT--NDRDVVDGSAELFYGQFSA 166
>gi|260598128|ref|YP_003210699.1| HTH-type transcriptional regulator YciT [Cronobacter turicensis
z3032]
gi|260217305|emb|CBA31277.1| Uncharacterized HTH-type transcriptional regulator yciT
[Cronobacter turicensis z3032]
Length = 251
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
M+ +KR A A V DG T+ + GST LA++
Sbjct: 67 MNNFALKRRLADFACSLVNDGETVFIENGSTNALLARALAEQKK 110
>gi|110803988|ref|YP_698624.1| transcription regulator [Clostridium perfringens SM101]
gi|110684489|gb|ABG87859.1| sugar-binding domain protein [Clostridium perfringens SM101]
Length = 344
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 2 DALQMKRNAARRAIQY----VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
D +K + A Y + DG T+ + GST KE + L + +AN V V+P+
Sbjct: 120 DENTIKEL-GKAAANYSKNIIKDGYTIAVTGGSTVKEVIDELPE-MANLKNVLVVPAR 175
>gi|110798615|ref|YP_695955.1| sugar-binding domain-containing protein [Clostridium perfringens
ATCC 13124]
gi|168207660|ref|ZP_02633665.1| sugar-binding domain protein [Clostridium perfringens E str.
JGS1987]
gi|168211759|ref|ZP_02637384.1| sugar-binding domain protein [Clostridium perfringens B str. ATCC
3626]
gi|168215123|ref|ZP_02640748.1| sugar-binding domain protein [Clostridium perfringens CPE str.
F4969]
gi|168218198|ref|ZP_02643823.1| sugar-binding domain protein [Clostridium perfringens NCTC 8239]
gi|169343208|ref|ZP_02864223.1| sugar-binding domain protein [Clostridium perfringens C str.
JGS1495]
gi|182626595|ref|ZP_02954341.1| sugar-binding domain protein [Clostridium perfringens D str.
JGS1721]
gi|110673262|gb|ABG82249.1| sugar-binding domain protein [Clostridium perfringens ATCC 13124]
gi|169298667|gb|EDS80746.1| sugar-binding domain protein [Clostridium perfringens C str.
JGS1495]
gi|170661012|gb|EDT13695.1| sugar-binding domain protein [Clostridium perfringens E str.
JGS1987]
gi|170710285|gb|EDT22467.1| sugar-binding domain protein [Clostridium perfringens B str. ATCC
3626]
gi|170713466|gb|EDT25648.1| sugar-binding domain protein [Clostridium perfringens CPE str.
F4969]
gi|177908075|gb|EDT70648.1| sugar-binding domain protein [Clostridium perfringens D str.
JGS1721]
gi|182379799|gb|EDT77278.1| sugar-binding domain protein [Clostridium perfringens NCTC 8239]
Length = 344
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 2 DALQMKRNAARRAIQY----VVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
D +K + A Y + DG T+ + GST KE + L + +AN V V+P+
Sbjct: 120 DENTIKEL-GKAAANYSKNIIKDGYTIAVTGGSTVKEVIDELPE-MANLKNVLVVPAR 175
>gi|159186547|ref|NP_396176.2| DeoR family transcriptional regulator [Agrobacterium tumefaciens
str. C58]
gi|159141607|gb|AAK90617.2| transcriptional regulator, DeoR family [Agrobacterium tumefaciens
str. C58]
Length = 253
Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 46/143 (32%), Gaps = 16/143 (11%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN---GFRVQVIPSSRNTENFCKI 64
A+ A+Q + L +G+GST +A ++ N + + K+
Sbjct: 80 ERIAKAAVQILKGAQVLMIGSGSTTVHTARRIAVEMKNITVLTHSFGVATVLAINPTIKV 139
Query: 65 HHIPLHSP---------EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR----EKIIAHA 111
+P VS ++ F + + G ALL +
Sbjct: 140 VMLPGDYHATEGATVGAHAVSFLNSFYADFTILGASGLGPDGPSDALLECGAVYSAMVSR 199
Query: 112 ASRFIVIGDESKRVDFLGRGMLP 134
A+R IV+ D SK P
Sbjct: 200 AARTIVVADHSKHDRLFPARYAP 222
>gi|322513560|ref|ZP_08066660.1| glucitol operon repressor [Actinobacillus ureae ATCC 25976]
gi|322120631|gb|EFX92525.1| glucitol operon repressor [Actinobacillus ureae ATCC 25976]
Length = 253
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A++++ D + + +GST + L
Sbjct: 78 KLAIANEAVKHIRDHNRIIIDSGSTTGAMVKAL 110
>gi|295095032|emb|CBK84122.1| Transcriptional regulators of sugar metabolism [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 266
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A Y+ DG T+ + G+T + L + + + S R K
Sbjct: 81 EEKRAIAEAIADYIPDGSTIFITIGTTVEHVARAL---LNHNHLRIITNSLRVAHILYKN 137
Query: 65 HHIPLHSP 72
+ P
Sbjct: 138 PRFEVMVP 145
>gi|258621768|ref|ZP_05716799.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM573]
gi|258585999|gb|EEW10717.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM573]
Length = 263
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 29/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI------------------ANGFR 48
K+ A A Q + DG + + +GST L K
Sbjct: 80 KQMIAFAAAQLIGDGEAIILDSGSTIALMPQHLTQKKLVVMTNALNTAYQLSHNENVELH 139
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGALLR 104
V R + + H + L +DGFD +
Sbjct: 140 VIGGSLRRASCSLTGHHGEHQIRSYLFDKLFLGVDGFDLQAGITTPDNHEAQ-------V 192
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 193 NRAMCDVARQIIAVTDSSKF 212
>gi|228932708|ref|ZP_04095581.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826966|gb|EEM72727.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 260
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMIPYLVHR--KNLTIVTSSFPVATQ 131
>gi|254361399|ref|ZP_04977540.1| DeoR family transcriptional regulator [Mannheimia haemolytica
PHL213]
gi|261494186|ref|ZP_05990688.1| DeoR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495582|ref|ZP_05992028.1| DeoR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|153092905|gb|EDN73936.1| DeoR family transcriptional regulator [Mannheimia haemolytica
PHL213]
gi|261308689|gb|EEY09946.1| DeoR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310167|gb|EEY11368.1| DeoR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 251
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 15/133 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTENFC 62
K A A+ + G ++ + G+T +A I + ++ S
Sbjct: 78 KERIAEYAVSLISPGNSILLDAGTTTLCIAKKIAHMPLRVITTDLHIALLLSEYKQIELI 137
Query: 63 KIHHIPLHSPEDV---SSVDLSID---GFDEIDSRLRLIKGYGGALLREK-----IIAHA 111
+S + S+ L + + ++ A EK ++
Sbjct: 138 ITGGRVDNSSQSCIGNHSLTLLENINPDIAFVSCNSWSLEKGVTAPTEEKANLKRMLQQN 197
Query: 112 ASRFIVIGDESKR 124
A + +++ D SK
Sbjct: 198 AKQKVLVADSSKY 210
>gi|302519431|ref|ZP_07271773.1| predicted protein [Streptomyces sp. SPB78]
gi|302428326|gb|EFL00142.1| predicted protein [Streptomyces sp. SPB78]
Length = 615
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A A ++V G + +G G+T LA ++A + V+
Sbjct: 79 KAAIAELAAEFVEPGEAVVIGAGTTT----QELARRLARVAGLTVVT 121
>gi|15613364|ref|NP_241667.1| transcriptional regulator [Bacillus halodurans C-125]
gi|10173415|dbj|BAB04520.1| transcriptional regulator [Bacillus halodurans C-125]
Length = 259
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 15/142 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
K+ A++A V +G T+ + +G+T E + LL D+ V P
Sbjct: 86 KQLIAKQASTLVPEGATILVDSGTTTLELIKLLKDRNDLTIVTNDITIAAELVNASPKCI 145
Query: 57 NTENFCKIHHIPLHSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
T ++ L P+ + L G +D + +K + A
Sbjct: 146 VTGGELQLGVGALFGPQTEGMIRELHVDLFFLGAHAVDEAAGVTAPTLEKAAIKKRMMEA 205
Query: 112 ASRFIVIGDESKRVDFLGRGML 133
A +I D SK +
Sbjct: 206 AQTTWLICDSSKFSKRAFANVC 227
>gi|325068524|ref|ZP_08127197.1| transcriptional regulator, DeoR family protein [Actinomyces oris
K20]
Length = 258
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 30/154 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL----------------------LADKIA 44
K A+ A V G ++G+ G+T E +A+++A
Sbjct: 78 KTRIAKAAAALVHPGDSVGLNGGTTTTEVAREIALLPELTDPEVPVTLVTNAVNIANEMA 137
Query: 45 NGFRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGG 100
V+V+ + + + V ++ L ++G DE + G
Sbjct: 138 VRQCVRVVVTGGIARARSFELTGPLASLILPSISVGTLFLGVEGLDE----RGAYAQHDG 193
Query: 101 ALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ AA +++ D SK + P
Sbjct: 194 EAAVNAALVEAAEHVVIVCDSSKLGRTAFALICP 227
>gi|318056494|ref|ZP_07975217.1| DeoR family transcriptional regulator [Streptomyces sp. SA3_actG]
gi|318075915|ref|ZP_07983247.1| DeoR family transcriptional regulator [Streptomyces sp. SA3_actF]
Length = 306
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A A ++V G + +G G+T LA ++A + V+
Sbjct: 67 KAAIAELAAEFVEPGEAVVIGAGTTT----QELARRLARVAGLTVVT 109
>gi|192359146|ref|YP_001984254.1| putative transcriptional regulator, DeoR family [Cellvibrio
japonicus Ueda107]
gi|190685311|gb|ACE82989.1| Putative transcriptional regulator, DeoR family [Cellvibrio
japonicus Ueda107]
Length = 255
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 17/145 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTG-STAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K+ AR A Q + D + + +G ST + L+ K + +
Sbjct: 78 KQAIARAAAQLIRDHNRIILDSGSSTTAALLPELSHKQGLVVMTNSLSIANALRELENEP 137
Query: 66 HIPLHSPEDVSS------------VDLS-IDGFDEIDSRLRLIKG---YGGALLREKIIA 109
I + + D F L L +G + +++A
Sbjct: 138 TILMTGGTWDPKSEGFQGQLAEQILRSYNFDQFFIGADGLDLARGTTTFNELYSLSRVMA 197
Query: 110 HAASRFIVIGDESKRVDFLGRGMLP 134
A IV+ + K + LP
Sbjct: 198 EVAREVIVMAESDKIGRKIHNLELP 222
>gi|153010230|ref|YP_001371444.1| DeoR family transcriptional regulator [Ochrobactrum anthropi ATCC
49188]
gi|151562118|gb|ABS15615.1| transcriptional regulator, DeoR family [Ochrobactrum anthropi ATCC
49188]
Length = 262
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K+ AR A++ V GMT+ + GS A +L + + VI ++
Sbjct: 83 EAKQKMARAALELVEPGMTVMINDGSMAA----VLGGMLLEKRPLTVITNNA 130
>gi|319796428|ref|YP_004158068.1| DeoR family transcriptional regulator [Variovorax paradoxus EPS]
gi|315598891|gb|ADU39957.1| transcriptional regulator, DeoR family [Variovorax paradoxus EPS]
Length = 257
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K R A + V G + + G+TA LA + + V+
Sbjct: 77 KVAIGRAAARLVKPGQVVFIDGGTTAV----QLARHLPKNLQATVVT 119
>gi|116252489|ref|YP_768327.1| transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841]
gi|115257137|emb|CAK08232.1| putative transcriptional regulator [Rhizobium leguminosarum bv.
viciae 3841]
Length = 240
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 24/146 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQ 50
KR +AI Y+ D T+ G+T + LL AD++ V+
Sbjct: 79 AKRQVCTQAIDYIHDDDTVFFDCGTTLPYLVDLLPDQIHITAICYAMNVADRLTRKPNVR 138
Query: 51 VIPSSRNTENFCKIHHI-PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE---- 105
++ D ++++ +D+R +G A E
Sbjct: 139 LVMLGGLYHPASASFSGATGLEMLDQLVINVAFLSAAGVDAR----RGATCAHFHEAEIK 194
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRG 131
K A + I++ D SK
Sbjct: 195 KKAMSRARKNILLADSSKIGKLKPAF 220
>gi|314929122|gb|EFS92953.1| DeoR-like helix-turn-helix protein [Propionibacterium acnes
HL044PA1]
Length = 244
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 20/137 (14%)
Query: 9 NAARRAIQ-----YVVDGMTLGMGTGSTAKEFMILLADKIANGFR-------------VQ 50
A + AI V D M++ + GST L ++ V
Sbjct: 67 AAGKAAIAQLVSRLVTDDMSVIIDNGSTMVAVAQALQERPITALCLSLRAALSLGEGGVA 126
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVS--SVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ + T + + + D++I G + L L ++ I
Sbjct: 127 TVSTPDGTLMPESLRYEAASCLRALGAFRADVAIIGTCSASPAMGLTVTTHQDALVKRAI 186
Query: 109 AHAASRFIVIGDESKRV 125
+++R I+ K
Sbjct: 187 LASSARVILAATSDKLS 203
>gi|258655441|ref|YP_003204597.1| DeoR family transcriptional regulator [Nakamurella multipartita DSM
44233]
gi|258558666|gb|ACV81608.1| transcriptional regulator, DeoR family [Nakamurella multipartita
DSM 44233]
Length = 290
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 25/139 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A RA + V GM + + GST LA + + + V+ +S
Sbjct: 94 KEAIATRAAELVRPGMAIAITAGSTTW----TLARHLGDIANLTVVTNSLKVAEVLHGRQ 149
Query: 67 IPLHSPEDVSSVDLSIDG--------------FDEIDSRLRLIKGYGGALLR-------E 105
P + + DG D + + I G
Sbjct: 150 RPDLTVVLTGGLRTPSDGLVGPVAVQAIRSLHVDMVIMGVHGIDERAGLTTPNLLEAETN 209
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + +A R +V+ D +K
Sbjct: 210 RALVESARRLVVVADHTKW 228
>gi|333026738|ref|ZP_08454802.1| hypothetical protein STTU_4241 [Streptomyces sp. Tu6071]
gi|332746590|gb|EGJ77031.1| hypothetical protein STTU_4241 [Streptomyces sp. Tu6071]
Length = 310
Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A A ++V G + +G G+T LA ++A + V+
Sbjct: 71 KAAIAELAAEFVEPGEAVVIGAGTTT----QELARRLARVAGLTVVT 113
>gi|317064933|ref|ZP_07929418.1| transcriptional regulator [Fusobacterium ulcerans ATCC 49185]
gi|313690609|gb|EFS27444.1| transcriptional regulator [Fusobacterium ulcerans ATCC 49185]
Length = 254
Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
+ KR A A++Y+ +G T+ + GST I +A I + + + ++
Sbjct: 77 EEKREVALLALKYINEGDTIALN-GSTTN---IEIARLIKDKYSSLTVVTN 123
>gi|293401882|ref|ZP_06646023.1| glucitol operon repressor [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304834|gb|EFE46082.1| glucitol operon repressor [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 265
Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 17/137 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQV 51
K+ AR+A+ ++ D + + GST + LL D I + +
Sbjct: 88 KQWIARKALDFIQDDSIVYLDPGSTCLQLAKLLRLKKNITVLTNSLPIGDIICDSGLELI 147
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA-H 110
+ + + + D +D++ G D + +
Sbjct: 148 MAGGKLQKKGRAFIGYYTTNVIDSIRIDIAFLGCDGFQ-DMDGPMTFSMEHAEINRHILR 206
Query: 111 AASRFIVIGDESKRVDF 127
+ + I++ D SK
Sbjct: 207 QSRKSILLCDSSKFTKT 223
>gi|84394594|ref|ZP_00993297.1| transcriptional regulator, DeoR family [Vibrio splendidus 12B01]
gi|218708431|ref|YP_002416052.1| transcriptional regulator [Vibrio splendidus LGP32]
gi|84374785|gb|EAP91729.1| transcriptional regulator, DeoR family [Vibrio splendidus 12B01]
gi|218321450|emb|CAV17402.1| transcriptional regulator [Vibrio splendidus LGP32]
Length = 256
Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + D + + +GST + L K +AN ++ P+
Sbjct: 79 KISLAKAAADLIRDHNRIVIDSGSTTGALIQQLNSKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++++F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSDSFQGKVAESVLRAYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMVESEKV 212
>gi|306841568|ref|ZP_07474266.1| DeoR family transcriptional regulator [Brucella sp. BO2]
gi|306288405|gb|EFM59764.1| DeoR family transcriptional regulator [Brucella sp. BO2]
Length = 221
Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K AR A++ V GMT+ + GS A L + + VI ++
Sbjct: 44 EAKLKMARAALELVEPGMTVMVNDGSMAAL----LGGMLREKRPLTVITNNA 91
>gi|225871738|ref|YP_002753192.1| transcriptional regulator, DeoR family [Acidobacterium capsulatum
ATCC 51196]
gi|225792885|gb|ACO32975.1| transcriptional regulator, DeoR family [Acidobacterium capsulatum
ATCC 51196]
Length = 261
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 31/142 (21%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR + + G T+G+ G+T + + + VI ++ N ++ +
Sbjct: 86 KRRIGLAGAELIQPGETIGLSAGTTTTFV----GRSLRHRENIDVITNAVNIG--MELCN 139
Query: 67 IPLHSPEDVSSV-----------DLSIDGFDEIDSRLRLIK-------------GYGGAL 102
P V ++D D++ + AL
Sbjct: 140 QPGIRTYLTGGVIPWTWSFSLTGHAALDFLDDVYMDRLFLSITGLHPERGITSLEQEEAL 199
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ K++ + + IV+ D SK
Sbjct: 200 VYRKMM-KRSKQIIVVSDSSKL 220
>gi|225028020|ref|ZP_03717212.1| hypothetical protein EUBHAL_02289 [Eubacterium hallii DSM 3353]
gi|224954620|gb|EEG35829.1| hypothetical protein EUBHAL_02289 [Eubacterium hallii DSM 3353]
Length = 249
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 21/141 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP---------SS 55
K A +A + V +G T+ + +GST LA + +
Sbjct: 71 DKKLEIATKAAEMVSNGETVMLESGSTCALLAEQLAKLKKDVTIITNSAYIAIRIRELPI 130
Query: 56 RNTENFCKIHHIPLHSPEDVSSV------DLSIDGFDEIDSRLRLIKGYGGALLRE---- 105
R + V + + +D F G+ L
Sbjct: 131 RKVILLGGEYQKEYQGM--VGPLVRKCAKEFYVDKFFVGTDGFIPDAGFTCDDLMRVETM 188
Query: 106 KIIAHAASRFIVIGDESKRVD 126
K + +A+R I++ D SK
Sbjct: 189 KYMEDSANRMIILADSSKFSQ 209
>gi|70729797|ref|YP_259536.1| DeoR family transcriptional regulator [Pseudomonas fluorescens
Pf-5]
gi|68344096|gb|AAY91702.1| transcriptional regulator, DeoR family [Pseudomonas fluorescens
Pf-5]
Length = 260
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
+ K A+ A+Q+V DG T+ +GST +A + G + + +S
Sbjct: 83 NEAKLRLAQYAVQWVQDGQTVLFDSGSTTLH----IAQSLPAGISLTAVTAS 130
>gi|237730058|ref|ZP_04560539.1| transcriptional regulator [Citrobacter sp. 30_2]
gi|226908664|gb|EEH94582.1| transcriptional regulator [Citrobacter sp. 30_2]
Length = 256
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 26/139 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A +A +V DG TL + +GST + + N + V+ ++ N
Sbjct: 80 KTRIAEKAASFVKDGDTLILDSGSTTTL----IPPMLKNRRDLVVMTNALNIAWELANFE 135
Query: 67 ---------------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY------GGALLRE 105
L+ P + + ++ G A L +
Sbjct: 136 RVDVMILGGNVRQSVYSLYGPSAEHQLRQYRFDKLFLGVDGFCLEAGITTPHPGEAHLNQ 195
Query: 106 KIIAHAASRFIVIGDESKR 124
++ A V+ D SK
Sbjct: 196 -VMCEVAQEVTVVADSSKF 213
>gi|21218832|ref|NP_624611.1| deoR family transcriptional regulator [Streptomyces coelicolor
A3(2)]
gi|256790171|ref|ZP_05528602.1| deoR family transcriptional regulator [Streptomyces lividans TK24]
gi|289774048|ref|ZP_06533426.1| deoR family transcriptional regulator [Streptomyces lividans TK24]
gi|5824091|emb|CAB54167.1| putative deoR family transcriptional regulator [Streptomyces
coelicolor A3(2)]
gi|289704247|gb|EFD71676.1| deoR family transcriptional regulator [Streptomyces lividans TK24]
Length = 254
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
KR A A V G + + G+TA + L +
Sbjct: 79 KRKVASAAAGLVRPGGVVILDGGTTALAVVHALPE 113
>gi|294853821|ref|ZP_06794493.1| hypothetical protein BAZG_02802 [Brucella sp. NVSL 07-0026]
gi|294819476|gb|EFG36476.1| hypothetical protein BAZG_02802 [Brucella sp. NVSL 07-0026]
Length = 254
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K AR A++ V GMT+ + GS A L + + VI ++
Sbjct: 77 EAKLKMARAALELVEPGMTVMVNDGSMAAL----LGGMLREKRPLTVITNNA 124
>gi|302869824|ref|YP_003838461.1| regulatory protein DeoR [Micromonospora aurantiaca ATCC 27029]
gi|315501287|ref|YP_004080174.1| transcriptional regulator, deor family [Micromonospora sp. L5]
gi|302572683|gb|ADL48885.1| regulatory protein DeoR [Micromonospora aurantiaca ATCC 27029]
gi|315407906|gb|ADU06023.1| transcriptional regulator, DeoR family [Micromonospora sp. L5]
Length = 262
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 25/155 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIANGFRVQV 51
K A A V G + + G+T E L D +A V
Sbjct: 76 QSAEKAAIAEHAAGLVRPGAAIALSAGTTTAELARRLVDVPGLTVVTNSLPVAEALHVGG 135
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGF---DEIDSRLRLIKGYGGALLR---- 104
P T P + V + ++ D + + I G
Sbjct: 136 RP--DQTVVLTGGVRTPSDAL--VGPLAVAAIAALHLDLLFLGVHGISERAGFTTPNLME 191
Query: 105 ---EKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
+ + AA R +V+ D +K ++P+E
Sbjct: 192 ADTNRALVAAADRLVVLADHTKWGTVGISSIVPLE 226
>gi|256058961|ref|ZP_05449175.1| Bacterial regulatory protein, DeoR family [Brucella neotomae 5K33]
gi|261322904|ref|ZP_05962101.1| transcriptional regulator [Brucella neotomae 5K33]
gi|261298884|gb|EEY02381.1| transcriptional regulator [Brucella neotomae 5K33]
Length = 254
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K AR A++ V GMT+ + GS A L + + VI ++
Sbjct: 77 EAKLKMARAALELVEPGMTVMVNDGSMAAL----LGGMLREKRPLTVITNNA 124
>gi|254712634|ref|ZP_05174445.1| Bacterial regulatory protein, DeoR family [Brucella ceti M644/93/1]
gi|254715705|ref|ZP_05177516.1| Bacterial regulatory protein, DeoR family [Brucella ceti M13/05/1]
gi|261217460|ref|ZP_05931741.1| transcriptional regulator [Brucella ceti M13/05/1]
gi|261320334|ref|ZP_05959531.1| transcriptional regulator [Brucella ceti M644/93/1]
gi|260922549|gb|EEX89117.1| transcriptional regulator [Brucella ceti M13/05/1]
gi|261293024|gb|EEX96520.1| transcriptional regulator [Brucella ceti M644/93/1]
Length = 254
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K AR A++ V GMT+ + GS A L + + VI ++
Sbjct: 77 EAKLKMARAALELVEPGMTVMVNDGSMAAL----LGGMLREKRPLTVITNNA 124
>gi|17988771|ref|NP_541404.1| DeoR family transcriptional regulator [Brucella melitensis bv. 1
str. 16M]
gi|225686630|ref|YP_002734602.1| DeoR family transcriptional regulator [Brucella melitensis ATCC
23457]
gi|256043737|ref|ZP_05446659.1| transcriptional regulator, DeoR family protein [Brucella melitensis
bv. 1 str. Rev.1]
gi|256111218|ref|ZP_05452254.1| transcriptional regulator, DeoR family protein [Brucella melitensis
bv. 3 str. Ether]
gi|256262237|ref|ZP_05464769.1| bacterial regulatory protein [Brucella melitensis bv. 2 str. 63/9]
gi|260564925|ref|ZP_05835410.1| bacterial regulatory protein [Brucella melitensis bv. 1 str. 16M]
gi|265990162|ref|ZP_06102719.1| transcriptional regulator [Brucella melitensis bv. 1 str. Rev.1]
gi|265992731|ref|ZP_06105288.1| transcriptional regulator [Brucella melitensis bv. 3 str. Ether]
gi|17984587|gb|AAL53668.1| transcriptional regulator, deor family [Brucella melitensis bv. 1
str. 16M]
gi|225642735|gb|ACO02648.1| transcriptional regulator, DeoR family protein [Brucella melitensis
ATCC 23457]
gi|260152568|gb|EEW87661.1| bacterial regulatory protein [Brucella melitensis bv. 1 str. 16M]
gi|262763601|gb|EEZ09633.1| transcriptional regulator [Brucella melitensis bv. 3 str. Ether]
gi|263000831|gb|EEZ13521.1| transcriptional regulator [Brucella melitensis bv. 1 str. Rev.1]
gi|263091934|gb|EEZ16256.1| bacterial regulatory protein [Brucella melitensis bv. 2 str. 63/9]
gi|326411020|gb|ADZ68084.1| DeoR family transcriptional regulator [Brucella melitensis M28]
gi|326554310|gb|ADZ88949.1| DeoR family transcriptional regulator [Brucella melitensis M5-90]
Length = 254
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K AR A++ V GMT+ + GS A L + + VI ++
Sbjct: 77 EAKLKMARAALELVEPGMTVMVNDGSMAAL----LGGMLREKRPLTVITNNA 124
>gi|23500596|ref|NP_700036.1| DeoR family transcriptional regulator [Brucella suis 1330]
gi|62317303|ref|YP_223156.1| DeoR family transcriptional regulator [Brucella abortus bv. 1 str.
9-941]
gi|83269284|ref|YP_418575.1| DeoR family regulatory protein [Brucella melitensis biovar Abortus
2308]
gi|148558206|ref|YP_001257799.1| DeoR family transcriptional regulator [Brucella ovis ATCC 25840]
gi|161620922|ref|YP_001594808.1| DeoR family transcriptional regulator [Brucella canis ATCC 23365]
gi|163844987|ref|YP_001622642.1| hypothetical protein BSUIS_B0861 [Brucella suis ATCC 23445]
gi|189022560|ref|YP_001932301.1| Bacterial regulatory protein, DeoR family [Brucella abortus S19]
gi|225629330|ref|ZP_03787363.1| DeoR family transcriptional regulator [Brucella ceti str. Cudo]
gi|237816860|ref|ZP_04595852.1| DeoR family transcriptional regulator [Brucella abortus str. 2308
A]
gi|254690810|ref|ZP_05154064.1| Bacterial regulatory protein, DeoR family [Brucella abortus bv. 6
str. 870]
gi|254695885|ref|ZP_05157713.1| Bacterial regulatory protein, DeoR family [Brucella abortus bv. 3
str. Tulya]
gi|254698588|ref|ZP_05160416.1| Bacterial regulatory protein, DeoR family [Brucella abortus bv. 2
str. 86/8/59]
gi|254700072|ref|ZP_05161900.1| Bacterial regulatory protein, DeoR family [Brucella suis bv. 5 str.
513]
gi|254703193|ref|ZP_05165021.1| Bacterial regulatory protein, DeoR family [Brucella suis bv. 3 str.
686]
gi|254705663|ref|ZP_05167491.1| Bacterial regulatory protein, DeoR family [Brucella pinnipedialis
M163/99/10]
gi|254710893|ref|ZP_05172704.1| Bacterial regulatory protein, DeoR family [Brucella pinnipedialis
B2/94]
gi|254720264|ref|ZP_05182075.1| Bacterial regulatory protein, DeoR family [Brucella sp. 83/13]
gi|254732035|ref|ZP_05190613.1| Bacterial regulatory protein, DeoR family [Brucella abortus bv. 4
str. 292]
gi|256015631|ref|YP_003105640.1| transcriptional regulator, DeoR family [Brucella microti CCM 4915]
gi|256029276|ref|ZP_05442890.1| Bacterial regulatory protein, DeoR family [Brucella pinnipedialis
M292/94/1]
gi|256157471|ref|ZP_05455389.1| Bacterial regulatory protein, DeoR family [Brucella ceti M490/95/1]
gi|256253551|ref|ZP_05459087.1| Bacterial regulatory protein, DeoR family [Brucella ceti B1/94]
gi|256255993|ref|ZP_05461529.1| Bacterial regulatory protein, DeoR family [Brucella abortus bv. 9
str. C68]
gi|260167632|ref|ZP_05754443.1| transcriptional regulator, DeoR family protein [Brucella sp. F5/99]
gi|260544540|ref|ZP_05820361.1| bacterial regulatory protein [Brucella abortus NCTC 8038]
gi|260567876|ref|ZP_05838345.1| bacterial regulatory protein [Brucella suis bv. 4 str. 40]
gi|260756383|ref|ZP_05868731.1| transcriptional regulator [Brucella abortus bv. 6 str. 870]
gi|260759811|ref|ZP_05872159.1| transcriptional regulator [Brucella abortus bv. 4 str. 292]
gi|260763050|ref|ZP_05875382.1| transcriptional regulator [Brucella abortus bv. 2 str. 86/8/59]
gi|260882208|ref|ZP_05893822.1| transcriptional regulator [Brucella abortus bv. 9 str. C68]
gi|261216311|ref|ZP_05930592.1| transcriptional regulator [Brucella abortus bv. 3 str. Tulya]
gi|261220684|ref|ZP_05934965.1| transcriptional regulator [Brucella ceti B1/94]
gi|261313077|ref|ZP_05952274.1| transcriptional regulator [Brucella pinnipedialis M163/99/10]
gi|261318470|ref|ZP_05957667.1| transcriptional regulator [Brucella pinnipedialis B2/94]
gi|261750561|ref|ZP_05994270.1| transcriptional regulator [Brucella suis bv. 5 str. 513]
gi|261753819|ref|ZP_05997528.1| transcriptional regulator [Brucella suis bv. 3 str. 686]
gi|261757062|ref|ZP_06000771.1| bacterial regulatory protein [Brucella sp. F5/99]
gi|265985277|ref|ZP_06098012.1| transcriptional regulator [Brucella sp. 83/13]
gi|265986269|ref|ZP_06098826.1| transcriptional regulator [Brucella pinnipedialis M292/94/1]
gi|265995965|ref|ZP_06108522.1| transcriptional regulator [Brucella ceti M490/95/1]
gi|297249350|ref|ZP_06933051.1| hypothetical protein BAYG_02097 [Brucella abortus bv. 5 str. B3196]
gi|306838594|ref|ZP_07471430.1| DeoR family transcriptional regulator [Brucella sp. NF 2653]
gi|306846085|ref|ZP_07478647.1| DeoR family transcriptional regulator [Brucella sp. BO1]
gi|4204900|gb|AAD11523.1| unknown [Brucella abortus]
gi|23464236|gb|AAN34041.1| transcriptional regulator, DeoR family [Brucella suis 1330]
gi|62197496|gb|AAX75795.1| transcriptional regulator, DeoR family [Brucella abortus bv. 1 str.
9-941]
gi|82939558|emb|CAJ12534.1| Bacterial regulatory protein, DeoR family [Brucella melitensis
biovar Abortus 2308]
gi|148369491|gb|ABQ62363.1| transcriptional regulator, DeoR family [Brucella ovis ATCC 25840]
gi|161337733|gb|ABX64037.1| transcriptional regulator, DeoR family [Brucella canis ATCC 23365]
gi|163675710|gb|ABY39820.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021134|gb|ACD73855.1| Bacterial regulatory protein, DeoR family [Brucella abortus S19]
gi|225615826|gb|EEH12875.1| DeoR family transcriptional regulator [Brucella ceti str. Cudo]
gi|237787673|gb|EEP61889.1| DeoR family transcriptional regulator [Brucella abortus str. 2308
A]
gi|255998291|gb|ACU49978.1| transcriptional regulator, DeoR family [Brucella microti CCM 4915]
gi|260097811|gb|EEW81685.1| bacterial regulatory protein [Brucella abortus NCTC 8038]
gi|260154541|gb|EEW89622.1| bacterial regulatory protein [Brucella suis bv. 4 str. 40]
gi|260670129|gb|EEX57069.1| transcriptional regulator [Brucella abortus bv. 4 str. 292]
gi|260673471|gb|EEX60292.1| transcriptional regulator [Brucella abortus bv. 2 str. 86/8/59]
gi|260676491|gb|EEX63312.1| transcriptional regulator [Brucella abortus bv. 6 str. 870]
gi|260871736|gb|EEX78805.1| transcriptional regulator [Brucella abortus bv. 9 str. C68]
gi|260917918|gb|EEX84779.1| transcriptional regulator [Brucella abortus bv. 3 str. Tulya]
gi|260919268|gb|EEX85921.1| transcriptional regulator [Brucella ceti B1/94]
gi|261297693|gb|EEY01190.1| transcriptional regulator [Brucella pinnipedialis B2/94]
gi|261302103|gb|EEY05600.1| transcriptional regulator [Brucella pinnipedialis M163/99/10]
gi|261737046|gb|EEY25042.1| bacterial regulatory protein [Brucella sp. F5/99]
gi|261740314|gb|EEY28240.1| transcriptional regulator [Brucella suis bv. 5 str. 513]
gi|261743572|gb|EEY31498.1| transcriptional regulator [Brucella suis bv. 3 str. 686]
gi|262550262|gb|EEZ06423.1| transcriptional regulator [Brucella ceti M490/95/1]
gi|264658466|gb|EEZ28727.1| transcriptional regulator [Brucella pinnipedialis M292/94/1]
gi|264663869|gb|EEZ34130.1| transcriptional regulator [Brucella sp. 83/13]
gi|297173219|gb|EFH32583.1| hypothetical protein BAYG_02097 [Brucella abortus bv. 5 str. B3196]
gi|306273336|gb|EFM55197.1| DeoR family transcriptional regulator [Brucella sp. BO1]
gi|306406237|gb|EFM62480.1| DeoR family transcriptional regulator [Brucella sp. NF 2653]
Length = 254
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K AR A++ V GMT+ + GS A L + + VI ++
Sbjct: 77 EAKLKMARAALELVEPGMTVMVNDGSMAAL----LGGMLREKRPLTVITNNA 124
>gi|301757815|ref|XP_002914746.1| PREDICTED: translation initiation factor eIF-2B subunit beta-like
[Ailuropoda melanoleuca]
gi|281351438|gb|EFB27022.1| hypothetical protein PANDA_002679 [Ailuropoda melanoleuca]
Length = 351
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 45/170 (26%), Gaps = 18/170 (10%)
Query: 8 RNAARRAIQYVVDGMTL-GMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
N A +A++++ + +G T + F+ A K V
Sbjct: 149 ENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLS 208
Query: 67 ---------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+S V+ I G I + ++ G H ++ IV
Sbjct: 209 KAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANG-ALRAVTGTHTLALAAKHHSTPLIV 267
Query: 118 IGDESKRV-------DFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNE 160
K D + + P E+ F L + F
Sbjct: 268 CAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDVLEKVSVHCPVFDYVP 317
>gi|288550532|ref|ZP_05970811.2| hypothetical protein ENTCAN_09553 [Enterobacter cancerogenus ATCC
35316]
gi|288314702|gb|EFC53640.1| glycerol-3-phosphate regulon repressor [Enterobacter cancerogenus
ATCC 35316]
Length = 274
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A Y+ DG T+ + G+T + L + + + S R K
Sbjct: 92 EEKRAIAEAIADYIPDGSTVFITIGTTVEHVARAL---LNHNHLRIITNSLRVAHILYKN 148
Query: 65 HHIPLHSP 72
+ P
Sbjct: 149 PRFEVMVP 156
>gi|28897132|ref|NP_796737.1| DeoR family transcriptional regulator [Vibrio parahaemolyticus RIMD
2210633]
gi|153839374|ref|ZP_01992041.1| glucitol operon repressor [Vibrio parahaemolyticus AQ3810]
gi|260361707|ref|ZP_05774734.1| glucitol operon repressor [Vibrio parahaemolyticus K5030]
gi|260878043|ref|ZP_05890398.1| glucitol operon repressor [Vibrio parahaemolyticus AN-5034]
gi|260896938|ref|ZP_05905434.1| glucitol operon repressor [Vibrio parahaemolyticus Peru-466]
gi|260902477|ref|ZP_05910872.1| glucitol operon repressor [Vibrio parahaemolyticus AQ4037]
gi|28805341|dbj|BAC58621.1| transcriptional regulator, DeoR family [Vibrio parahaemolyticus
RIMD 2210633]
gi|149747096|gb|EDM58084.1| glucitol operon repressor [Vibrio parahaemolyticus AQ3810]
gi|308088730|gb|EFO38425.1| glucitol operon repressor [Vibrio parahaemolyticus Peru-466]
gi|308089837|gb|EFO39532.1| glucitol operon repressor [Vibrio parahaemolyticus AN-5034]
gi|308109788|gb|EFO47328.1| glucitol operon repressor [Vibrio parahaemolyticus AQ4037]
gi|308111832|gb|EFO49372.1| glucitol operon repressor [Vibrio parahaemolyticus K5030]
gi|328471928|gb|EGF42805.1| DeoR family transcriptional regulator [Vibrio parahaemolyticus
10329]
Length = 253
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + D + + +GST + L DK +AN ++ P+
Sbjct: 79 KLSLAKAAASLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESK 123
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESEK 211
>gi|324112724|gb|EGC06700.1| deoR family protein regulatory protein [Escherichia fergusonii
B253]
gi|325496782|gb|EGC94641.1| DNA-binding transcriptional repressor DeoR [Escherichia fergusonii
ECD227]
Length = 252
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR AA++A + V TL G+T + +
Sbjct: 77 EEKRRAAQQAAELVQPHQTLFFDCGTTTPWIIEAI 111
>gi|222083006|ref|YP_002542371.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium radiobacter K84]
gi|221727685|gb|ACM30774.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium radiobacter K84]
Length = 253
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K A V DGM + + TG+T + L +
Sbjct: 79 KARIGEAAAALVEDGMKVFIDTGTTTIACLKHLEAR 114
>gi|218548359|ref|YP_002382150.1| DNA-binding transcriptional repressor DeoR [Escherichia fergusonii
ATCC 35469]
gi|218355900|emb|CAQ88515.1| DNA-binding transcriptional repressor [Escherichia fergusonii ATCC
35469]
Length = 265
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR AA++A + V TL G+T + +
Sbjct: 90 EEKRRAAQQAAELVQPHQTLFFDCGTTTPWIIEAI 124
>gi|167745413|ref|ZP_02417540.1| hypothetical protein ANACAC_00104 [Anaerostipes caccae DSM 14662]
gi|167655134|gb|EDR99263.1| hypothetical protein ANACAC_00104 [Anaerostipes caccae DSM 14662]
Length = 254
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++ K+ A+ A + DG + + +G+T LA + + + V+ +
Sbjct: 77 MEEKQKIAKAARAMIEDGDMILLDSGTTTL----ELAKLLKDANNLTVVTNDLQ 126
>gi|94970934|ref|YP_592982.1| DeoR family transcriptional regulator [Candidatus Koribacter
versatilis Ellin345]
gi|94552984|gb|ABF42908.1| transcriptional regulator, DeoR family [Candidatus Koribacter
versatilis Ellin345]
Length = 267
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 37/160 (23%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS------------ 54
K A A++ V +G + + +GST ++ + + + VI +
Sbjct: 94 KLRIASAAVRMVKEGQCVILDSGSTTT----AISRALRDFRELTVITNAVNIAAELAGTS 149
Query: 55 ----------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDE--IDSRLRLIKGYGGAL 102
+N+ + + + L +DGFD + +++
Sbjct: 150 IDVILTGGTLRKNSFSLVGPQAEDTLREINADVLFLGVDGFDAKVGLTTPNVLEAR---- 205
Query: 103 LREKIIAHAASRFIVIGDESKRVDFLGRGMLPI----EID 138
+ +AHAA R + + D SK ++P E+
Sbjct: 206 -VNRAMAHAARRVVAVCDSSKFGKRSLAVIVPPDAIHEVI 244
>gi|328955018|ref|YP_004372351.1| DeoR family transcriptional regulator [Coriobacterium glomerans
PW2]
gi|328455342|gb|AEB06536.1| transcriptional regulator, DeoR family [Coriobacterium glomerans
PW2]
Length = 270
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
+ KR A+ ++ + DG L + +G+TA EF+ +L
Sbjct: 83 EAKRRIAQASLSLISDGDALLVDSGTTALEFVRMLG 118
>gi|328950460|ref|YP_004367795.1| transcriptional regulator, DeoR family [Marinithermus
hydrothermalis DSM 14884]
gi|328450784|gb|AEB11685.1| transcriptional regulator, DeoR family [Marinithermus
hydrothermalis DSM 14884]
Length = 266
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR--NTENFCKI 64
KR AR A++++ +G ++ + G+T LA + + FR + ++ T +
Sbjct: 79 KRAIARAALEHIDEGDSIILDAGTTTLL----LARLMKSRFRSLYVITNSVPVTLELAET 134
Query: 65 HHIPLHSPEDVS------------------SVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
L + V VD + G + ++
Sbjct: 135 RWELLLAGGQVRPHSLALIGPATVRTLEDYHVDKAFLGATGVSLEKGCTTPNPTEAEAKR 194
Query: 107 IIAHAASRFIVIGDESKR 124
+ HAA R V+ D SK
Sbjct: 195 AMLHAAERVFVLADSSKL 212
>gi|304406047|ref|ZP_07387705.1| transcriptional regulator, DeoR family [Paenibacillus
curdlanolyticus YK9]
gi|304345290|gb|EFM11126.1| transcriptional regulator, DeoR family [Paenibacillus
curdlanolyticus YK9]
Length = 261
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 42/145 (28%), Gaps = 18/145 (12%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK------IANGFRVQVI---PSSR 56
K+ R A + DG TL + +T + + A K + N + +
Sbjct: 77 AKKRIGRAAAALIQDGETLFLNASTTVQAAVEACAGKDIYLTAVTNSIDTAAVLGKSPNA 136
Query: 57 NTENFCKI---HHIPLHSPEDVSSV-----DLSIDGFDEIDSRLRLIKGYGGALLREKII 108
H + P+ V+ + + G I + ++ +
Sbjct: 137 KVHLLGGQYNAWHRSVTGPQTVAMIRDFRAQTLLLGACAITPDGLSSPVLDETYV-KREM 195
Query: 109 AHAASRFIVIGDESKRVDFLGRGML 133
A R IV+ D K +
Sbjct: 196 IAMADRVIVLADSGKYQQSFLHHVC 220
>gi|257470728|ref|ZP_05634818.1| DeoR family transcriptional regulator [Fusobacterium ulcerans
ATCC 49185]
Length = 226
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
+ KR A A++Y+ +G T+ + GST I +A I + + + ++
Sbjct: 49 EEKREVALLALKYINEGDTIALN-GSTTN---IEIARLIKDKYSSLTVVTN 95
>gi|255035896|ref|YP_003086517.1| transcriptional regulator, DeoR family [Dyadobacter fermentans DSM
18053]
gi|254948652|gb|ACT93352.1| transcriptional regulator, DeoR family [Dyadobacter fermentans DSM
18053]
Length = 255
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 46/149 (30%), Gaps = 33/149 (22%)
Query: 2 DALQM--KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN-- 57
+ + K A + ++++ +G T+ + +GST +A K+ + + ++
Sbjct: 72 NQENLDKKELIAAKCLEFISNGDTIILDSGSTTT----EIAKKLRGSNKHLTVITNALNI 127
Query: 58 ----------------------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLI 95
T + +V + L+ G
Sbjct: 128 ALILGAETGIEVIMTGGEFKPPTLSLTGQKAADFFKGLNVQKLFLATAGLSLKAGLTYPS 187
Query: 96 KGYGGALLREKIIAHAASRFIVIGDESKR 124
L+ +K + AA ++ D +K
Sbjct: 188 I---ADLVVKKAMIDAADTTYLVADSTKV 213
>gi|302549515|ref|ZP_07301857.1| transcriptional regulator [Streptomyces viridochromogenes DSM
40736]
gi|302467133|gb|EFL30226.1| transcriptional regulator [Streptomyces viridochromogenes DSM
40736]
Length = 267
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS 54
+ K+ AR A V G TL + GST LA ++ + V +
Sbjct: 77 EAKQAIARWAAAQVRPGETLLLDAGSTVG----ALAHELRTAEDITVATT 122
>gi|269961800|ref|ZP_06176157.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833378|gb|EEZ87480.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 250
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ + K+ A ++ + +G TL +G G+T LA+
Sbjct: 75 NQQE-KQIIADEVVKAIPNGTTLFLGIGTTIALVAERLANH 114
>gi|296327749|ref|ZP_06870288.1| lactose PTS family porter repressor [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155096|gb|EFG95874.1| lactose PTS family porter repressor [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 245
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 17/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL---------------LADKIANGFRVQV 51
K+ A+ A Q++ +G + + G+T E + L IAN +
Sbjct: 78 KKKIAKLAAQFISNGDYIYLDAGTTTYEIIDYMKGKDIKVVTNGIIHLEKLIANDIETYL 137
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
I + L + D + G + I+ AL +K
Sbjct: 138 IGGRIKKSTLAIVGVKALRDLSEF-RFDKAFIGINGINENGYSTHDIEEAL-IKKQAIDN 195
Query: 112 ASRFIVIGDESKR 124
+++ ++ D SK
Sbjct: 196 SNKAFILADSSKF 208
>gi|320537475|ref|ZP_08037421.1| DeoR-like helix-turn-helix protein [Treponema phagedenis F0421]
gi|320145671|gb|EFW37341.1| DeoR-like helix-turn-helix protein [Treponema phagedenis F0421]
Length = 248
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 45/145 (31%), Gaps = 25/145 (17%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
+ + K AR A + + + G+T + ++ K + + +S +
Sbjct: 77 NQSE-KLEIARYAASLIQQDDFVYLDAGTTTGCMIDFISQK-----NITFVTNSFSHAER 130
Query: 62 CKIHHIPLHSP-EDVSSVDLSIDGFDEIDS--RLRLIKGYGGAL---------------- 102
+ ++ ++ G + I+S + KG+ G
Sbjct: 131 LSERGFRTYILGGEIKQTSEAVVGEEAIESLLKYNFTKGFWGTNGVSPNTGFSTPDISEA 190
Query: 103 LREKIIAHAASRFIVIGDESKRVDF 127
L +K + VI D SK
Sbjct: 191 LIKKAAMKRTHKRYVICDASKFSKL 215
>gi|225619937|ref|YP_002721194.1| transcription-repair coupling factor [Brachyspira hyodysenteriae
WA1]
gi|225214756|gb|ACN83490.1| transcription-repair coupling factor [Brachyspira hyodysenteriae
WA1]
Length = 246
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 16/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA--DKIA---NGFRV--QVIPSSRN 57
+ K + A V G T+ + G++ + LA + I NG ++
Sbjct: 75 EEKEKIGKFAASLVESGSTIYLDAGTSVFAMIKYLAGIENIKVVTNGLSHIEELYNKKIE 134
Query: 58 TENFCKIHHIPLHSP---EDVSSV-----DLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
T + + V S+ DL+ G + ID AL +
Sbjct: 135 TYLIGGKMKMLTGALVGSSAVLSIKNFNFDLAFMGANGIDINGYSTPDSEEAL-IKNEAC 193
Query: 110 HAASRFIVIGDESKR 124
A++ + DESK
Sbjct: 194 TKANKTYFLCDESKF 208
>gi|146302587|ref|YP_001197178.1| DeoR family transcriptional regulator [Flavobacterium johnsoniae
UW101]
gi|146157005|gb|ABQ07859.1| transcriptional regulator, DeoR family [Flavobacterium johnsoniae
UW101]
Length = 270
Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 45/150 (30%), Gaps = 22/150 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGST----AKEF--------------MILLADKIAN- 45
+ K+ A++AI Y+ DG + + G+T F + LA+ + N
Sbjct: 96 ENKKIIAQKAISYLKDGQVVFIDGGTTSLALVASFPYDLKLTVITNSFPVATLAEDLPNI 155
Query: 46 GFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + I + + I G I + + +
Sbjct: 156 DLIFAGGKMCKTSFTTSSIETVDFFRSFRAD---VCILGICSIHHERGVTGILYDDSMLK 212
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPI 135
K + ++ I + K + PI
Sbjct: 213 KNMVQNSNFVIALSSIEKVETAESYFVCPI 242
>gi|326389733|ref|ZP_08211298.1| transcriptional regulator, DeoR family [Thermoanaerobacter
ethanolicus JW 200]
gi|325994215|gb|EGD52642.1| transcriptional regulator, DeoR family [Thermoanaerobacter
ethanolicus JW 200]
Length = 251
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K+ A RA+ + +G + + GST +A I N + V+
Sbjct: 76 EEKQKIAARAVSEIQEGHVIFLDAGSTTYH----IARAIRNFKGITVVT 120
>gi|302540788|ref|ZP_07293130.1| DeoR family transcriptional regulator [Streptomyces hygroscopicus
ATCC 53653]
gi|302458406|gb|EFL21499.1| DeoR family transcriptional regulator [Streptomyces
himastatinicus ATCC 53653]
Length = 244
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A+ A V G +G+ G+TA LA ++ + V+
Sbjct: 46 AKEDIAKAAAAMVTPGTAIGLAGGTTAF----ALAQQLLEVPDLTVVT 89
>gi|90408740|ref|ZP_01216887.1| DeoR-family transcriptional regulator [Psychromonas sp. CNPT3]
gi|90310157|gb|EAS38295.1| DeoR-family transcriptional regulator [Psychromonas sp. CNPT3]
Length = 254
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 18/124 (14%)
Query: 3 ALQ---MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
+ +K+ A AI ++ +G T+ + +G+T LA + F V+ S
Sbjct: 70 QDEIDPLKKRVALAAIPFIKEGQTILLDSGTT--CL--QLAMNLPTDFNFTVVTPS---- 121
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIG 119
+ ++++L + G + + A+LR KI + I
Sbjct: 122 ------PLVAIKLMHHNNIELILLGGKIFKPSVMTLGATTNAMLR-KIHFDSCFLGICAL 174
Query: 120 DESK 123
S+
Sbjct: 175 HPSQ 178
>gi|301169734|emb|CBW29335.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae 10810]
Length = 252
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRVQVIPSS 55
K +++A++ + + T+ + G+T E +A++ IA+ V +
Sbjct: 79 KTAISKKAVELIQEHSTIYLDAGTTTLEIAKQIANRNDLLVITNDFVIAHYLMVNSQCNI 138
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY----GGALLREKIIAHA 111
+T + + I + +KG + +K I
Sbjct: 139 MHTGGLINKSNRSSVGEFAAQFLHQISVDIAFISTSSWNLKGLTTPDEQKIPVKKAIIQF 198
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
+ + I++ D SK + P+
Sbjct: 199 SQKNILVTDSSKYGKVATFLLYPL 222
>gi|295689834|ref|YP_003593527.1| DeoR family transcriptional regulator [Caulobacter segnis ATCC
21756]
gi|295431737|gb|ADG10909.1| transcriptional regulator, DeoR family [Caulobacter segnis ATCC
21756]
Length = 253
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 38/141 (26%), Gaps = 19/141 (13%)
Query: 3 ALQM--KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT-- 58
+ K A A +V DG TL + G+TA LA +
Sbjct: 73 QENLAEKTRIAAAAAPFVRDGDTLFIDAGTTACYVARALAGVRRELKVITNSLVVAQILG 132
Query: 59 -------ENFCKIHHIPLHSPEDV--------SSVDLSIDGFDEIDSRLRLIKGYGGALL 103
+ D + L+I + L+ +
Sbjct: 133 GRDGNSLFLAGGELDYDYKAFSDHVAQAYVAQFTPHLAILTVGGVHPDHGLMDRHAREAA 192
Query: 104 REKIIAHAASRFIVIGDESKR 124
+II A R ++ D SK
Sbjct: 193 ISRIIYDRADRVLLAADRSKF 213
>gi|261492700|ref|ZP_05989248.1| putative transcriptional regulator of sugar metabolism [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261495685|ref|ZP_05992131.1| putative transcriptional regulator of sugar metabolism [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261308792|gb|EEY10049.1| putative transcriptional regulator of sugar metabolism [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261311553|gb|EEY12708.1| putative transcriptional regulator of sugar metabolism [Mannheimia
haemolytica serotype A2 str. BOVINE]
Length = 253
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 23/136 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------ANGFRVQVIPS- 54
K+ A+ A + D + + +GST + L A ++ P+
Sbjct: 79 KKMIAQAARDCIRDHNRIIIDSGSTTGALVKALNQTGLVVMTNSLNLAAELTSLECEPTV 138
Query: 55 -------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+E+F + D + + DG D + G + +
Sbjct: 139 LMTGGTWDSRSESFQGKVAEQVLRSYDFDQLFIGADGLDLARGTTTFNELVGLSQV---- 194
Query: 108 IAHAASRFIVIGDESK 123
+A + IV+ + K
Sbjct: 195 MAEVSREVIVLIESQK 210
>gi|229591055|ref|YP_002873174.1| putative DeoR family transcriptional regulator [Pseudomonas
fluorescens SBW25]
gi|229362921|emb|CAY49839.1| putative DeoR family transcriptional regulator [Pseudomonas
fluorescens SBW25]
Length = 261
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 22/114 (19%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ KR AR A + V +G + +GST +A + R+ V+ S
Sbjct: 83 NEAKRRLARLAAERVEEGQIVLFDSGSTTL----QIAQSLPRSMRLTVVTPS-------- 130
Query: 64 IHHIPLHSPEDVSSVDLSIDG--------FDEIDSRLRLIKGYGGALLREKIIA 109
+ + D V + + G +R+I+ LL + A
Sbjct: 131 --PMIAIALADHPDVKVILTGGQLNPATLSTSGQETVRMIQSIKADLLFTGVCA 182
>gi|187922074|ref|YP_001893716.1| DeoR family transcriptional regulator [Burkholderia phytofirmans
PsJN]
gi|187713268|gb|ACD14492.1| transcriptional regulator, DeoR family [Burkholderia phytofirmans
PsJN]
Length = 252
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K A A +V +GM + + TG+T L
Sbjct: 74 QTKAKTQIATCAAGFVQEGMAIFLDTGTTTFAMAQAL 110
>gi|333022765|ref|ZP_08450829.1| putative transcriptional regulator, DeoR family [Streptomyces sp.
Tu6071]
gi|332742617|gb|EGJ73058.1| putative transcriptional regulator, DeoR family [Streptomyces sp.
Tu6071]
Length = 205
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 16/139 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSR 56
+ K A A+ + D T+ + G+T + L D+ + N + + S+
Sbjct: 26 TQWEEKGRIAEAALPLIRDHSTVLISGGTTTETLAARLGDRRGLTVVTNALPIAQVLSAT 85
Query: 57 NTEN-------FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE---- 105
+ L + + +L ID L G GA + E
Sbjct: 86 AAVDVIVLGGVLRHREQSLLGHLAERALAELQIDQIFTSSFGLDAETGLTGAHVDEAQTD 145
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + AA +V+ DESK
Sbjct: 146 RALLAAARDIVVLADESKL 164
>gi|330447295|ref|ZP_08310945.1| deoR-like helix-turn-helix domain protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328491486|dbj|GAA05442.1| deoR-like helix-turn-helix domain protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 257
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR----- 48
+ K+ A A + + D + + GST + LL K +AN
Sbjct: 77 ERKQAIALAASELIRDHNRIIVDCGSTTAALINLLGTKQGLVVMTNSLQVANALNALENE 136
Query: 49 ----VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ ++E+F + D + + DG D + G +
Sbjct: 137 PTLLMTGGTWDPHSESFQGKVAESVLRSYDFDQLFIGADGIDIARGTTTFNELTGLS--- 193
Query: 105 EKIIAHAASRFIVIGDESK 123
+++A + +V+ + K
Sbjct: 194 -RVMAEVSREVVVMIESCK 211
>gi|167768682|ref|ZP_02440735.1| hypothetical protein CLOSS21_03241 [Clostridium sp. SS2/1]
gi|317498895|ref|ZP_07957179.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|167710206|gb|EDS20785.1| hypothetical protein CLOSS21_03241 [Clostridium sp. SS2/1]
gi|291559763|emb|CBL38563.1| Transcriptional regulators of sugar metabolism [butyrate-producing
bacterium SSC/2]
gi|316893820|gb|EFV16018.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 253
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 17/147 (11%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------IANGF 47
++ KR ++ A +V D T+ + +G+T + +A+K
Sbjct: 77 MKEKRLISQLAASHVCDHDTIFIDSGTTCHNIIDFIAEKECTILTNSLQVSLKAIPYENL 136
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
V +P E + + + + + I + L L +K
Sbjct: 137 NVISLPGFLKRETLSFVDGNIAEYLKAYN-ITKAFMSCTGISIQNGLSNASSEEYLVKKS 195
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLP 134
+ ++ + D SK DF P
Sbjct: 196 VIENSTIRFALADHSKFGDFSLMTFCP 222
>gi|331003226|ref|ZP_08326733.1| hypothetical protein HMPREF0491_01595 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412879|gb|EGG92259.1| hypothetical protein HMPREF0491_01595 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 251
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 15/134 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K+ A +A Q + DGM + + + ST + LL + I + N +
Sbjct: 78 DKKQLIAGKAAQLLKDGMVIFLDSSSTVCQLAPLLKLRHNITIITNGINIANELSNAQDL 137
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLR---LIKGYGGALLRE------------KIIA 109
S+ + + I + K +
Sbjct: 138 KCFLCPGVLKHKSLSIVGEFASSFIKNFNAELAIISCKAINTKGIFEGDDSQGLVKKSMI 197
Query: 110 HAASRFIVIGDESK 123
A++ +++ D +K
Sbjct: 198 ENANKTVLLCDNTK 211
>gi|205352702|ref|YP_002226503.1| regulatory protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205272483|emb|CAR37372.1| putative regulatory protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627770|gb|EGE34113.1| putative regulatory protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 263
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 15/137 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGST----AKEFMILLADKIANGFRVQVIPSSRNT 58
+ KR A A ++ DG + +GST AK + I N ++ P
Sbjct: 79 QSEAKREIAALARTFIKDGDCFFLDSGSTCLELAKCLVDAKVKVICNDIKIANEPGGFPH 138
Query: 59 ENFCKIHHIPLHSPEDVSS-----------VDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
I + V V+ + D + + + +
Sbjct: 139 VESYIIGGLIRPGYFSVGESLALEMINAFAVERAFLSCDALSIETGITNATMFEVGVKTR 198
Query: 108 IAHAASRFIVIGDESKR 124
I + I++ D SK
Sbjct: 199 IIQRSREVILMADHSKF 215
>gi|268679390|ref|YP_003303821.1| hypothetical protein Sdel_0753 [Sulfurospirillum deleyianum DSM
6946]
gi|268617421|gb|ACZ11786.1| protein of unknown function DUF1121 [Sulfurospirillum deleyianum
DSM 6946]
Length = 198
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 19/170 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA--DKIANGFRVQVIPSSRNTENFCKI 64
K A R A+ +V M +G G GST+ + + + + + + + N
Sbjct: 21 KEEALRVAMSFVKPQMRIGFG-GSTS---VKEIGLYEYVTSRKDI----TLFNQYESGIS 72
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA--ASRFIVIGDES 122
+ VDL I + + LI G ++ A + ++I ++
Sbjct: 73 MEENVERRRQGLLVDLYICSTNALSKNGELINADGS---GNRVAAQMFGPKKVLIIAGKN 129
Query: 123 KRVDFLGRGMLPI-EIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSGL 171
K V+ + G I E+ K L + VA G L G
Sbjct: 130 KLVETIEDGFKRIREV---AAPKNLERMNNVAKSMGKVPRYTLETIGQKF 176
>gi|261404649|ref|YP_003240890.1| DeoR family transcriptional regulator [Paenibacillus sp. Y412MC10]
gi|261281112|gb|ACX63083.1| transcriptional regulator, DeoR family [Paenibacillus sp. Y412MC10]
Length = 253
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 15/106 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + A V DG + + +G+T +A + + + VI + N
Sbjct: 79 KIRIGQLAASLVEDGENIIIDSGTTTLH----IATHLVHRSDITVITNDMN--------- 125
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
D + + + G E+ ++ G + + + A
Sbjct: 126 -VAVELRDAPGIKVILTGG-ELYPSSYMLNGMFTDHVLKSLHVEKA 169
>gi|118444323|ref|YP_877542.1| sugar metabolism transcriptional regulator [Clostridium novyi NT]
gi|118134779|gb|ABK61823.1| Transcriptional regulator of sugar metabolism, putative
[Clostridium novyi NT]
Length = 256
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 9 NAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQVIP 53
A++A +Y+ DG T+ +G S + L A K+ V+
Sbjct: 82 AVAKKAAKYIDDGDTIFIGGASIHYVLLKYLPLDKNYTVVTNSLTIAQKLKLLSNVETYI 141
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAAS 113
N +N + +D++ I ++ L + +K +A +
Sbjct: 142 VCGNIKNDEGVVDALATEFIRTLRIDVAFLTGGGISAKHGLSSATPEGSIFQKTVAQVSR 201
Query: 114 RFIVIGDESKR 124
R I + + K
Sbjct: 202 RKICLANFDKV 212
>gi|330836079|ref|YP_004410720.1| transcriptional regulator, DeoR family [Spirochaeta coccoides DSM
17374]
gi|329747982|gb|AEC01338.1| transcriptional regulator, DeoR family [Spirochaeta coccoides DSM
17374]
Length = 247
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 23/140 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++K+ A+ A V +G ++ + +GST LA + + + C
Sbjct: 71 EVKQKIAKMAAGLVKNGESVMIESGSTCAMLAYELAKSRKDVMIITNSAFIADFIRRCAA 130
Query: 65 HHIP--------------------LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
I V + DG++ +
Sbjct: 131 VRITLLGGYYDHDAQVMSGPLTRLCAQQFSVDKFFMGTDGYEVGQGFSNVDLQRAE---T 187
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ +A +A I++ D SK
Sbjct: 188 VRAMAGSAKHNIIVADSSKF 207
>gi|311899867|dbj|BAJ32275.1| putative acyl-CoA synthetase [Kitasatospora setae KM-6054]
Length = 469
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 190 DPQIISGELCNIPGVIE-HGLFINMVDCAIIGTSDGE 225
D + L +PGV+E LF + A T+DG
Sbjct: 372 DLNEVEQALTGLPGVVEAVVLFADGAIEAYAATADGV 408
>gi|162452277|ref|YP_001614644.1| DeoR family transcriptional regulator [Sorangium cellulosum 'So ce
56']
gi|161162859|emb|CAN94164.1| Transcriptional regulator, DeoR family [Sorangium cellulosum 'So ce
56']
Length = 266
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 14/80 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K AR A + G + + +G T + L + V P
Sbjct: 84 KAKEELARAAATLIKRGQVVFIDSG-TTNVAVARLLPRDLEATVVTNSPPVA-------- 134
Query: 65 HHIPLHSPEDVSSVDLSIDG 84
+ + V++ + G
Sbjct: 135 -----IALSEHPRVEVVLLG 149
>gi|254788179|ref|YP_003075608.1| glucitol operon repressor [Teredinibacter turnerae T7901]
gi|237684294|gb|ACR11558.1| glucitol operon repressor [Teredinibacter turnerae T7901]
Length = 255
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 43/138 (31%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K A+ A + + D + + +G T + LA K +AN R
Sbjct: 81 KLYIAQAAARLIRDHNRIIIDSGHTTAALLPELAHKQGLVVMTNSLDVANALRELENEPT 140
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ +E F + D + + DG D Y +
Sbjct: 141 LLMTGGTWDSRSEAFQGQLAEQMLRAYDFDQLFIGADGLDPARGTT----TYNELYSLSR 196
Query: 107 IIAHAASRFIVIGDESKR 124
I+A + +V+ + +K
Sbjct: 197 IMAEVSREVVVMAESAKV 214
>gi|227833302|ref|YP_002835009.1| transcriptional regulator, DeoR family [Corynebacterium aurimucosum
ATCC 700975]
gi|262184286|ref|ZP_06043707.1| transcriptional regulator, DeoR family protein [Corynebacterium
aurimucosum ATCC 700975]
gi|227454318|gb|ACP33071.1| transcriptional regulator, DeoR family [Corynebacterium aurimucosum
ATCC 700975]
Length = 260
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 19/138 (13%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K AR A++ + DG ++ + G+T L+ + + G V S +
Sbjct: 79 AKMAIARAALEQLPDGGSIFLDAGTTTNALADLIGQRYSAGQFSIVSNSLPIALSLASNG 138
Query: 66 HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKG-----YGGALL--------------REK 106
+ D + L++ AL +
Sbjct: 139 VSEVQLLGGTVRAITQAVVGDTALRTMALMRADVAFVGTNALTIDHGLSTADSQEAAIKS 198
Query: 107 IIAHAASRFIVIGDESKR 124
A R +V+ D SK
Sbjct: 199 AFVTNAHRVVVLCDSSKL 216
>gi|167584070|ref|ZP_02376458.1| transcriptional regulator, DeoR family protein [Burkholderia
ubonensis Bu]
Length = 252
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR RRA ++V DG ++ + +GST + LADK
Sbjct: 75 DAKRAIGRRAAEFVPDGASVLIDSGSTPHAVALALADKHR 114
>gi|258507186|ref|YP_003169937.1| DeoR family transcriptional regulator [Lactobacillus rhamnosus GG]
gi|257147113|emb|CAR86086.1| Transcriptional regulator, DeoR family [Lactobacillus rhamnosus GG]
gi|259648556|dbj|BAI40718.1| putative transcriptional regulator [Lactobacillus rhamnosus GG]
Length = 250
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 17/146 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----KIANGFRVQVIPSSRNTE 59
KR A RA + + GM+L + + +T+ + L D + NG V + S RN
Sbjct: 76 DAKRVVATRANRLIKSGMSLFIDSSTTSLVLIRELKDIDELYIVTNGILVALEASKRN-G 134
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL-----------REKII 108
+ + ++ + S D + + + L + G ++
Sbjct: 135 WYVSLVGGTVNKMLENISGDKATRDIENYQADLAVFSCRGLIATGATDANDQEANIKRAF 194
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLP 134
A A + +++ D +K P
Sbjct: 195 AANADQVMLLVDHTKVGKHQLYMSAP 220
>gi|149188377|ref|ZP_01866671.1| transcriptional regulator of sugar metabolism [Vibrio shilonii AK1]
gi|148837966|gb|EDL54909.1| transcriptional regulator of sugar metabolism [Vibrio shilonii AK1]
Length = 260
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 37/137 (27%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A A V G ++ + +GST LA G + + + +
Sbjct: 86 KERIACVAAGLVRKGDSIIIDSGSTTHLVAKCLA---KEGGYTIITNNLAASSELLEAPD 142
Query: 67 IPLH-----SPEDVSSVDLS--------------IDGFDEIDSRLRLIKGYGGALLREKI 107
L S+ G D ID I + +
Sbjct: 143 TTLVIVGGTYRSKTKSLHGYQAEQCLNGVQADVLFVGADGIDPEK-GITTFNEGYAITGV 201
Query: 108 IAHAASRFIVIGDESKR 124
+A + + + D +K
Sbjct: 202 MASCVQKVVAVVDSAKL 218
>gi|13475543|ref|NP_107107.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
gi|14026295|dbj|BAB52893.1| transcriptional regulator [Mesorhizobium loti MAFF303099]
Length = 238
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 1 MDA-LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
MD + K+ A+ A + G + + +GST + L
Sbjct: 53 MDTRHRQKQALAQTAATMIEPGEFIFLDSGSTNLALIDFL 92
>gi|288961448|ref|YP_003451787.1| transcriptional regulator [Azospirillum sp. B510]
gi|288913756|dbj|BAI75243.1| transcriptional regulator [Azospirillum sp. B510]
Length = 260
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+MKR A A + G T+ + G+T LA +I R+ V+
Sbjct: 84 EMKRAACEAAAGLLKPGETVFVDCGTTTTH----LASRIPADSRITVVC 128
>gi|16272944|ref|NP_439170.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae Rd
KW20]
gi|260580098|ref|ZP_05847928.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
RdAW]
gi|2506566|sp|P44978|Y1009_HAEIN RecName: Full=Uncharacterized HTH-type transcriptional regulator
HI_1009
gi|1574039|gb|AAC22670.1| glycerol-3-phosphate regulon repressor (glpR) [Haemophilus
influenzae Rd KW20]
gi|260093382|gb|EEW77315.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
RdAW]
Length = 256
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRVQVIPSS 55
K +++A++ + + T+ + G+T E +A++ IA+ V +
Sbjct: 83 KTAISKKAVELIQEHSTIYLDAGTTTLEIAKQIANRNDLLVITNDFVIAHYLMVNSQCNI 142
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY----GGALLREKIIAHA 111
+T + + I + +KG + +K I
Sbjct: 143 MHTGGLINKSNRSSVGEFAAQFLHQISVDIAFISTSSWNLKGLTTPDEQKIPVKKAIIQF 202
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
+ + I++ D SK + P+
Sbjct: 203 SQKNILVTDSSKYGKVATFLLYPL 226
>gi|330819714|ref|YP_004348576.1| Transcriptional regulator, DeoR family protein [Burkholderia
gladioli BSR3]
gi|327371709|gb|AEA63064.1| Transcriptional regulator, DeoR family protein [Burkholderia
gladioli BSR3]
Length = 253
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
K+ RRA +V DG +L + +GST + L D+
Sbjct: 75 NAKQAIGRRAADFVPDGASLLLDSGSTTHAVALALTDRHR 114
>gi|300715749|ref|YP_003740552.1| transcriptional regulator, DeoR family [Erwinia billingiae Eb661]
gi|299061585|emb|CAX58699.1| Transcriptional regulator, DeoR family [Erwinia billingiae Eb661]
Length = 251
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR A++ + + G + + G+T E + L D +
Sbjct: 75 DAKRKVAQKGAELISSGQVVIIDGGTTTSELIACLPDDLR 114
>gi|291515970|emb|CBK65180.1| Transcriptional regulators of sugar metabolism [Alistipes shahii
WAL 8301]
Length = 257
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 18/138 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV------------- 51
KR A+RA + + + ++ M +GST F + ++ + +
Sbjct: 78 DAKRRIAQRAAEMLGETDSIIMASGSTVYAFAEEIKMRMWHHLNIVTPFLRLGVLLNESE 137
Query: 52 ---IPSSRNTENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREK 106
+ + + + + + ++ G D ID + +
Sbjct: 138 NVNVVQLGGSVHKKSLSVLGEEAARELDDCICSKVFFGVDGIDPEHGITTSTIDEAKLTR 197
Query: 107 IIAHAASRFIVIGDESKR 124
+ HAAS+ IV+ D SK
Sbjct: 198 RMMHAASQVIVLADSSKF 215
>gi|114565191|ref|YP_752705.1| transcriptional regulator, DeoR family protein [Shewanella
frigidimarina NCIMB 400]
gi|114336484|gb|ABI73866.1| transcriptional regulator, DeoR family [Shewanella frigidimarina
NCIMB 400]
Length = 256
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 20/150 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A +A + + D + + +GST + L DK + +
Sbjct: 78 KQAIAAKAAELIRDHNRIIIDSGSTTSGIVQQLNDKRGLVVMTNSLQLANAIHELENEPT 137
Query: 67 IPLHSPEDVSS------------VDLS-----IDGFDEIDSRLRLIKGYGGALLR-EKII 108
+ + + G D ID L K++
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLDRGTTT--FNELTGLSKVM 195
Query: 109 AHAASRFIVIGDESKRVDFLGRGMLPIEID 138
A + +V+ + +K + LP ++
Sbjct: 196 AEMSREVVVLLESTKIGRRIPNLELPWDVV 225
>gi|262164067|ref|ZP_06031806.1| transcriptional regulator of GlmS, DeoR family [Vibrio mimicus
VM223]
gi|262027595|gb|EEY46261.1| transcriptional regulator of GlmS, DeoR family [Vibrio mimicus
VM223]
Length = 256
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 79 KVSLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 138
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESDKV 212
>gi|209696227|ref|YP_002264157.1| putative glucitol operon repressor [Aliivibrio salmonicida LFI1238]
gi|208010180|emb|CAQ80507.1| putative glucitol operon repressor [Aliivibrio salmonicida LFI1238]
Length = 254
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K + A A++ + D + + +GST + L+ K
Sbjct: 79 KLSLAISAVELIKDHNRIIIDSGSTTAALINQLSTK 114
>gi|90578482|ref|ZP_01234293.1| transcriptional regulator of sugar metabolism [Vibrio angustum S14]
gi|90441568|gb|EAS66748.1| transcriptional regulator of sugar metabolism [Vibrio angustum S14]
Length = 258
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 44/148 (29%), Gaps = 32/148 (21%)
Query: 2 DALQ--MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIA 44
D L K+ A A + V DG T+ + +G+T L A +++
Sbjct: 72 DQLNRSAKQYIAEAAAKLVNDGDTIILDSGTTIGLMPKYLNNKQHLVVMTNAINTAYQLS 131
Query: 45 NG----FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIK 96
N V R + + + L +DGFD +
Sbjct: 132 NNDSVDLHVVGGNLRRTSCSLTGHQGEEQVRAYLFDKLFLGVDGFDLQAGITTPDNHEAQ 191
Query: 97 GYGGALLREKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 192 -------MNRAMCDVARQVIAVADSSKF 212
>gi|329945985|ref|ZP_08293672.1| transcriptional regulator, DeoR family [Actinomyces sp. oral taxon
170 str. F0386]
gi|328528433|gb|EGF55411.1| transcriptional regulator, DeoR family [Actinomyces sp. oral taxon
170 str. F0386]
Length = 255
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++KR A+ + DG + + +G+T + LA +
Sbjct: 79 EIKRRLAQATADLIEDGEAVIIDSGTTCEMVAEQLAGR 116
>gi|325068271|ref|ZP_08126944.1| DeoR family regulatory protein [Actinomyces oris K20]
Length = 255
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 2 DAL-QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++KR A+ + + DG + + +G+T + LA +
Sbjct: 75 SQDVEIKRRLAQATAELIEDGEAVIIDSGTTCEMVAEQLAGR 116
>gi|303289967|ref|XP_003064271.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454587|gb|EEH51893.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 110
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 8 RNAARRAIQ-YVVDGMTLGMGTGSTAKEFMILLADKIANGFRV 49
R AA RAI +V G +G+G G+ + + +++ + R
Sbjct: 67 RAAANRAIDAHVESGDRVGIGHGAMTSMALDRIHERLNDEVRS 109
>gi|325579268|ref|ZP_08149224.1| glucitol operon repressor [Haemophilus parainfluenzae ATCC 33392]
gi|325159503|gb|EGC71637.1| glucitol operon repressor [Haemophilus parainfluenzae ATCC 33392]
Length = 260
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
Q K A+ A + + D + + +GST + L K
Sbjct: 81 QRKLVLAKAAAERIRDHNRIIVDSGSTTAALIKQLNRK 118
>gi|315644568|ref|ZP_07897700.1| transcriptional regulator, DeoR family protein [Paenibacillus
vortex V453]
gi|315280075|gb|EFU43372.1| transcriptional regulator, DeoR family protein [Paenibacillus
vortex V453]
Length = 254
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
L+ K AR++ +++ DG + + +GST +A + + ++ V+
Sbjct: 74 SQLEEKDRIARKSSEFIHDGDCIYIDSGSTTY----QIAKYVKHKKKLTVVT 121
>gi|239833422|ref|ZP_04681750.1| DeoR family transcriptional regulator [Ochrobactrum intermedium LMG
3301]
gi|239821485|gb|EEQ93054.1| DeoR family transcriptional regulator [Ochrobactrum intermedium LMG
3301]
Length = 254
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
+ K+ AR A++ V GMT+ + GS A +L + + VI ++
Sbjct: 77 EAKQKMARAALELVEPGMTVMVNDGSMAA----VLGGMLLEKRPLTVITNNA 124
>gi|269121624|ref|YP_003309801.1| DeoR family transcriptional regulator [Sebaldella termitidis ATCC
33386]
gi|268615502|gb|ACZ09870.1| transcriptional regulator, DeoR family [Sebaldella termitidis ATCC
33386]
Length = 252
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 47/141 (33%), Gaps = 25/141 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ R A + V DG + + +G+T + + +++++ + T +
Sbjct: 82 EEKKAICREAAKVVKDGDLIFLDSGTTPLYLIPYI-----QNKKIKIVTNCYLTLARLQG 136
Query: 65 HHIPLHSP-------EDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-------------LR 104
++ +V S +I+ + I G L
Sbjct: 137 CDAQIYMLGGLYIPKYEVCSGPSTIEQLKQFRFDHAFIGANGIDLELGEVYSSEFEIGAL 196
Query: 105 EKIIAHAASRFIVIGDESKRV 125
+K + + ++ D+SK
Sbjct: 197 KKAVMKRSKDSYLLVDDSKFS 217
>gi|225025962|ref|ZP_03715154.1| hypothetical protein EUBHAL_00199 [Eubacterium hallii DSM 3353]
gi|224956748|gb|EEG37957.1| hypothetical protein EUBHAL_00199 [Eubacterium hallii DSM 3353]
Length = 254
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K + A + +G + +G GST + L+ I + + + T
Sbjct: 77 EKKEKIGKEAAMLLKNGQRIFIGAGST----LDYLSSYI-DNTNRLYVVTDSITVVNQLN 131
Query: 65 HHIPLHSPEDVSSVDLSIDGF 85
+ + + I G
Sbjct: 132 NRSEVEIFMIGGEITKHILGA 152
>gi|282600205|ref|ZP_05973396.2| transcriptional regulator, DeoR family [Providencia rustigianii DSM
4541]
gi|282566241|gb|EFB71776.1| transcriptional regulator, DeoR family [Providencia rustigianii DSM
4541]
Length = 242
Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 48/142 (33%), Gaps = 18/142 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEF------MI---------LLADKIANGFRVQV 51
KR A +A + + G TL + G+T EF + LLA+ + ++
Sbjct: 66 KRAIAAKAAELIKPGDTLFIDFGTTTFEFSQRIKLIDNITVITNSPLLANTLQENTTIET 125
Query: 52 IPSSRNTENFCKIHHIPLHSPEDVSSV--DLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I + ++++ D ++ G + ++ + + +
Sbjct: 126 ILIGGQFNAAQNACLG-AIALKNITEFFADYAVIGAGAFHPQHGVMDQHVDEAAIAQKMM 184
Query: 110 HAASRFIVIGDESKRVDFLGRG 131
+ + +V+ D +K
Sbjct: 185 ENSDKLMVLADGTKAHKHAINF 206
>gi|301155511|emb|CBW14978.1| DNA-bindng transcriptional repressor [Haemophilus parainfluenzae
T3T1]
Length = 260
Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
Q K A+ A + + D + + +GST + L K
Sbjct: 81 QRKLVLAKAAAERIRDHNRIIVDSGSTTAALIKQLNRK 118
>gi|254254594|ref|ZP_04947911.1| regulatory protein DeoR [Burkholderia dolosa AUO158]
gi|124899239|gb|EAY71082.1| regulatory protein DeoR [Burkholderia dolosa AUO158]
Length = 287
Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------------ANGF 47
KR RRA ++V D ++ + +GST + LAD+ NG
Sbjct: 110 DAKRAIGRRAARFVPDDASVLIDSGSTPHAVALALADRHRLSVYTNDWRTAFVLARRNGN 169
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
RV ++ + + + VD + G I + A
Sbjct: 170 RVTLLGGELSDDEDATFGLDTIQQLAQY-HVDFAFVGAGGITADGECTDYSRLAAEVRSR 228
Query: 108 IAHAASRFIVIGDESKR 124
+ AA I++ D SK
Sbjct: 229 MIAAAGIAILVADHSKF 245
>gi|294499967|ref|YP_003563667.1| DeoR family transcriptional regulator [Bacillus megaterium QM
B1551]
gi|294349904|gb|ADE70233.1| transcriptional regulator, DeoR family [Bacillus megaterium QM
B1551]
Length = 256
Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 43/143 (30%), Gaps = 29/143 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ +A + + +G + + GST + L N + VI +S +
Sbjct: 81 KKKIGSKAAELIEEGNVIFIDEGSTTMHMVSSL----VNISNITVITNSFPLVTMLIDYQ 136
Query: 67 IPLHSPEDVSSV---------------------DLSIDGF----DEIDSRLRLIKGYGGA 101
+V + + +D D + +
Sbjct: 137 NKQVFSGEVIFLGGHVRSKHFRASGSLAERVAKEFYVDKAFISIDGLHPEAGITSFDLEK 196
Query: 102 LLREKIIAHAASRFIVIGDESKR 124
L KI A++ IV+ D SK
Sbjct: 197 CLLSKIFIANANQTIVLADHSKL 219
>gi|297565440|ref|YP_003684412.1| DeoR family transcriptional regulator [Meiothermus silvanus DSM
9946]
gi|296849889|gb|ADH62904.1| transcriptional regulator, DeoR family [Meiothermus silvanus DSM
9946]
Length = 267
Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 45/139 (32%), Gaps = 18/139 (12%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR----NT 58
K A A++Y+ +G TL + G+T L+ + + + + T
Sbjct: 75 QQSEKLGIAHAALRYIEEGDTLILDAGTTTLMLARLMKRRFRSLYVITNSVPIALELSET 134
Query: 59 EN-------FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY------GGALLRE 105
+ H + L P V ++++ + + I A +
Sbjct: 135 RWDLLLLGGQVRHHSMALIGPATVRTLEVYHADKAFMSATGVSIAKGYTTPNPYEAET-K 193
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + AA + D SK
Sbjct: 194 RAMIKAADATYAVVDSSKL 212
>gi|86142036|ref|ZP_01060560.1| transcriptional regulator, GlpR family protein [Leeuwenhoekiella
blandensis MED217]
gi|85831599|gb|EAQ50055.1| transcriptional regulator, GlpR family protein [Leeuwenhoekiella
blandensis MED217]
Length = 250
Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 40/140 (28%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
+ K A A Q + + ++ + +G+T LA I G + S K
Sbjct: 74 EEKSLIAEAAAQRIQENDSIIIASGTTV----QQLAKAIKPIGKLNVITSSLLVAIELMK 129
Query: 64 IHHIPLHSP-------------EDVSSV------DLSIDGFDEIDSRLRLIKGYGGALLR 104
I + + G D ID +
Sbjct: 130 HRDIDIIQLGGNIRHRSGSVTGHYAEHILNHISSHQFFMGVDGIDLDFGCTTTNIEEAIL 189
Query: 105 EKIIAHAASRFIVIGDESKR 124
K + AA + I++ D SK
Sbjct: 190 NKKMMEAAQKTIILADSSKF 209
>gi|266621733|ref|ZP_06114668.1| putative glycerol-3-phosphate regulon repressor [Clostridium
hathewayi DSM 13479]
gi|288866595|gb|EFC98893.1| putative glycerol-3-phosphate regulon repressor [Clostridium
hathewayi DSM 13479]
Length = 249
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 23/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR+A +++ G T+ + G+T +A I + V+ + K
Sbjct: 76 KEMIARKAAEFIRGGTTIFLDAGTTTY----EIAKHIMEYENMTVVTNDLEVALLLKNSR 131
Query: 67 -------------------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ D+ G I+ ++ ++
Sbjct: 132 VELFICGGYIQKSTGSAVGYYATQMMENFRFDMGFFGAAAINEEFHVLTPTIDKAFLKRQ 191
Query: 108 IAHAASRFIVIGDESKR 124
+ H + ++ D+SK
Sbjct: 192 LTHQCQQSFLVVDDSKF 208
>gi|220933124|ref|YP_002510032.1| glucosamine-6-phosphate isomerase [Halothermothrix orenii H 168]
gi|254766741|sp|B8D185|NAGB_HALOH RecName: Full=Glucosamine-6-phosphate deaminase; AltName:
Full=GlcN6P deaminase; Short=GNPDA; AltName:
Full=Glucosamine-6-phosphate isomerase
gi|219994434|gb|ACL71037.1| glucosamine-6-phosphate isomerase [Halothermothrix orenii H 168]
Length = 241
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 5 QMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+M + AA V LG+ TGST LA+ G ++ N + +
Sbjct: 11 EMSKKAALLVASQVILKPDSVLGLATGSTPIGMYQELAEMYKEGEIDFSEVTTFNLDEYY 70
Query: 63 KIHHIPLHSPE 73
+ S
Sbjct: 71 NLPPEAPQSYH 81
>gi|322410840|gb|EFY01748.1| bifunctional phosphoribosylaminoimidazolecarboxamide
formyltransferase/IMP cyclohydrolase [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 514
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 21/102 (20%)
Query: 1 MDALQMKRNAARRAIQYVV--------DGMTLGMGTGST-----AKEFMILLADKIANGF 47
M AL+ A +AI+YV D MTLG+G+G T + + ++ N
Sbjct: 402 MTALEF----AWKAIKYVKSNGILIANDHMTLGVGSGQTNRVASVRIAI----EQAKNHL 453
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEID 89
V+ S I I + + S+ D ID
Sbjct: 454 DGAVLASDAFFPFADNIEEIATSGLKAIIQPGGSVRDQDSID 495
>gi|295838638|ref|ZP_06825571.1| transcriptional regulator [Streptomyces sp. SPB74]
gi|295827110|gb|EFG65247.1| transcriptional regulator [Streptomyces sp. SPB74]
Length = 271
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A A ++V G + +G G+T LA ++A + V+
Sbjct: 86 KAAIAELAAEFVEPGEAVVIGAGTTT----QELARRLARVAGLTVVT 128
>gi|254521938|ref|ZP_05133993.1| glucitol operon repressor [Stenotrophomonas sp. SKA14]
gi|219719529|gb|EED38054.1| glucitol operon repressor [Stenotrophomonas sp. SKA14]
Length = 258
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 32/143 (22%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
+K + RA + V G + + +GST LA + V V+ +
Sbjct: 79 LKESIGARAARLVQPGDNIIIDSGSTTM----TLARHLRAHRDVTVMTNGLNIAWELANA 134
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ + + + ++ L +DG D + + A
Sbjct: 135 TGINVLLTGGLLRQQSLSLQGSQAEASLNSYSFDTLFLGVDGLDL----QFGLTTHDEAE 190
Query: 103 LREK-IIAHAASRFIVIGDESKR 124
R + A R +V+ D SK
Sbjct: 191 ARLNHRMVERARRIVVLTDASKF 213
>gi|159044976|ref|YP_001533770.1| transcriptional regulator [Dinoroseobacter shibae DFL 12]
gi|157912736|gb|ABV94169.1| transcriptional regulator [Dinoroseobacter shibae DFL 12]
Length = 284
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 49/146 (33%), Gaps = 16/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A A++ DG + + G+T + + LA + F + ++
Sbjct: 99 EEKQAIAAAAVELCDDGDAIIINGGTTTFQMVHPLASRRMQVFTNSFPIAEHLLKHSKNT 158
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA---------------LLREKIIA 109
+ + ++ LS D + + + GA + E+ +
Sbjct: 159 VMLSGGTIYREQNIILSPFDND-VTRNFCARRMFMGAQGLGPLGLMEADPLLIQAEQKLI 217
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPI 135
A IV+ D SK + P+
Sbjct: 218 GQADELIVLADSSKFEQRSSLVLCPL 243
>gi|262172399|ref|ZP_06040077.1| transcriptional regulator of GlmS, DeoR family [Vibrio mimicus
MB-451]
gi|261893475|gb|EEY39461.1| transcriptional regulator of GlmS, DeoR family [Vibrio mimicus
MB-451]
Length = 234
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K + A+ A + + D + + +GST + L DK +AN
Sbjct: 57 KVSLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELENEPT 116
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D + G + K
Sbjct: 117 LLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLERGTTTFNELVGLS----K 172
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 173 VMAEVSREVIVMIESDKV 190
>gi|291301541|ref|YP_003512819.1| DeoR family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290570761|gb|ADD43726.1| transcriptional regulator, DeoR family [Stackebrandtia nassauensis
DSM 44728]
Length = 262
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 25/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
KR A++A +Y+ GM++ + +T E + LLA G + ++
Sbjct: 86 NQKRAIAKQASKYIEPGMSIMLDDATTTAEMIPLLA-----GLSPLRVATNYLEGMRQLS 140
Query: 65 HHIPLHSPE---DVSSVDLSIDG-----------FDEIDSRLRLIKGYGGALLREKIIA- 109
+ D + S G D + + G ++I+A
Sbjct: 141 QLDNVGLMALGGDYDPLHDSFMGGTCLECIESLRVDAVFVSTSALSGRYAFHQEDRIVAV 200
Query: 110 -----HAASRFIVIGDESKR 124
A + ++ D +K
Sbjct: 201 KRKMLEVAEKRYLLMDNTKL 220
>gi|257388700|ref|YP_003178473.1| DeoR family transcriptional regulator [Halomicrobium mukohataei DSM
12286]
gi|257171007|gb|ACV48766.1| transcriptional regulator, DeoR family [Halomicrobium mukohataei
DSM 12286]
Length = 254
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 15/138 (10%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL---------------LADKIANG 46
D L K+ A RA+ + D + G+T LA + +
Sbjct: 74 DRLDAKQAIAARAVDLLQDAQVVSFDAGTTTMAVARALPSEAGVEAVTNMPDLATTLLDK 133
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + D VDL G + ID+ L +
Sbjct: 134 GIEVTVTGGTLRRRTRALVGPTAQRFLDDHHVDLLFVGTNSIDATAGLTTPNEAEAAVKS 193
Query: 107 IIAHAASRFIVIGDESKR 124
ASR +++ D SK
Sbjct: 194 RFVEQASRVVLVADSSKF 211
>gi|217966820|ref|YP_002352326.1| DeoR family transcriptional regulator [Dictyoglomus turgidum DSM
6724]
gi|217335919|gb|ACK41712.1| transcriptional regulator, DeoR family [Dictyoglomus turgidum DSM
6724]
Length = 257
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN------ 60
K+ + A + + DG ++ + TGST +A I + V V+ +S
Sbjct: 79 KQAIGKIAAELINDGESVFIETGSTTL----QIAKNIKHKHDVTVVTNSIEVARELLSAR 134
Query: 61 ----------FCKIHHIPLHSPEDV----SSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
K + + VD G I + +K
Sbjct: 135 GVEVILTGGLLRKETVALVGPIAERVLREFRVDKVFLGISGIIPSKGMYTASIAEAQIKK 194
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
+I I + D SK + P
Sbjct: 195 LIIEMGREIIGVSDHSKFGKECFAFVAP 222
>gi|292490110|ref|YP_003533005.1| glycerol-3-phosphate regulon repressor [Erwinia amylovora CFBP1430]
gi|292901116|ref|YP_003540485.1| DeoR family transcriptional regulator [Erwinia amylovora ATCC
49946]
gi|291200964|emb|CBJ48103.1| DeoR-family transcriptional regulator [Erwinia amylovora ATCC
49946]
gi|291555552|emb|CBA24122.1| Glycerol-3-phosphate regulon repressor [Erwinia amylovora CFBP1430]
gi|312174303|emb|CBX82556.1| Glycerol-3-phosphate regulon repressor [Erwinia amylovora ATCC
BAA-2158]
Length = 264
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR AR A + + G T+ + GST L + +G V + +
Sbjct: 78 KRAIARTAARLLQPGQTVFLDAGSTTTMLAEEL--RTMSGLTVITNSLNAALKLCAAEED 135
Query: 67 IP 68
Sbjct: 136 ET 137
>gi|218283403|ref|ZP_03489422.1| hypothetical protein EUBIFOR_02011 [Eubacterium biforme DSM 3989]
gi|218215876|gb|EEC89414.1| hypothetical protein EUBIFOR_02011 [Eubacterium biforme DSM 3989]
Length = 262
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
++ K+ A +A + +G ++ +G G+T + LA+++ G ++VI +S N
Sbjct: 87 QIEEKKRIAHKAATLISEGESVFLGPGTT----IQFLAEQL-TGRNIRVITNSLAVFNIL 141
Query: 63 KIHHIPLHSPE 73
H
Sbjct: 142 VNHAPTEVILT 152
>gi|89071945|ref|ZP_01158541.1| hypothetical GlpR, transcriptional regulators of sugar metabolism
[Photobacterium sp. SKA34]
gi|89052046|gb|EAR57497.1| hypothetical GlpR, transcriptional regulators of sugar metabolism
[Photobacterium sp. SKA34]
Length = 258
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANG---- 46
K+ A A + V DG T+ + +G+T L A +++N
Sbjct: 78 AKQYIAEAAAKLVNDGDTIILDSGTTIGLMPKYLNNKQHLVVMTNALNTAYQLSNNNNVD 137
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFD----EIDSRLRLIKGYGGAL 102
V R + + + L +DGFD +
Sbjct: 138 LHVVGGNLRRTSCSLTGHQGEEQVRAYLFDKLFLGVDGFDLQAGITTPDNHEAQ------ 191
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + A + I + D SK
Sbjct: 192 -MNRAMCDVARQVIAVADSSKF 212
>gi|194448395|ref|YP_002047013.1| DeoR family transcriptional regulator [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205359162|ref|ZP_02667747.2| transcriptional regulator, DeoR family [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194406699|gb|ACF66918.1| transcriptional regulator, DeoR family [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205338051|gb|EDZ24815.1| transcriptional regulator, DeoR family [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
Length = 251
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI--ANGFRVQVIPSSRNTENFCKI 64
K+ AR+A+ ++ ++ +GTGS + LA+ + +GF++ +
Sbjct: 79 KQAIARKALDFIPPNSSMIIGTGS-SNY---ELANLLCMKSGFKIFTDSLPVASVLIESD 134
Query: 65 HHI 67
+ +
Sbjct: 135 NQV 137
>gi|119717545|ref|YP_924510.1| DeoR family transcriptional regulator [Nocardioides sp. JS614]
gi|119538206|gb|ABL82823.1| transcriptional regulator, DeoR family [Nocardioides sp. JS614]
Length = 245
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTENFC 62
KR + Q ++ G T+ + +GST E L + + N + + + R +
Sbjct: 74 KRAIGKAMAQRILPGQTVLLDSGSTTLEVARHLEARQLTVVTNDLLIGKVIAERQNAHLV 133
Query: 63 KI------HHIPLHSPEDVSSVD-----LSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
I + + P V + L++ G D + + + L ++ +
Sbjct: 134 FIGGELLPNLYTMWGPTSVQQLQNLRVNLAVFGADTVTADG-IYNTTSYELEVKRTMRSI 192
Query: 112 ASRFIVIGDESKR 124
A+ ++ D SK
Sbjct: 193 AAEAFLVADSSKF 205
>gi|323703305|ref|ZP_08114956.1| transcriptional regulator, DeoR family [Desulfotomaculum
nigrificans DSM 574]
gi|323531770|gb|EGB21658.1| transcriptional regulator, DeoR family [Desulfotomaculum
nigrificans DSM 574]
Length = 264
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGST--------------------AKEFMILLADKIA 44
+ KR A++A++ + +G T+ + G+T F L
Sbjct: 86 EEKRAIAKKALELIREGDTILLDAGTTTFELAKQLKSFSKLVVVTNAVNIF-QELITHPG 144
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + T S V + L+ +G D A +
Sbjct: 145 IELIIIGGTLRKETLAMVGPMAEQALSMIRVDKLFLATNGLDV--EAGLTTPNLIEAATK 202
Query: 105 EKIIAHAASRFIVIGDESKR 124
K+I + A + I++ D SK
Sbjct: 203 RKMI-NIAKQVILLADHSKV 221
>gi|325693825|gb|EGD35744.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK150]
Length = 247
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVHDNETIMIESGSTCALLAEEICRTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 EASDQMIVLTDSSKF 206
>gi|269122903|ref|YP_003305480.1| transcriptional regulator, DeoR family [Streptobacillus
moniliformis DSM 12112]
gi|268314229|gb|ACZ00603.1| transcriptional regulator, DeoR family [Streptobacillus
moniliformis DSM 12112]
Length = 236
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ KR +++A +YV + + G+T E + L +
Sbjct: 79 EKKRVISKKASKYVKPNTLIYLDAGTTVFEIISYLKNM 116
>gi|239628774|ref|ZP_04671805.1| regulatory protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518920|gb|EEQ58786.1| regulatory protein [Clostridiales bacterium 1_7_47FAA]
Length = 255
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 17/137 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----------KIANGFRVQVIPS 54
+ K+ ARRA+ + + + + GST +E LL D I N + +
Sbjct: 78 EQKQRIARRALTLIREDDVILLDDGSTTQELANLLGDFRVTVLTNDLLIVNELMYKPNVT 137
Query: 55 SRNTENFCKIHHIPLHSPEDVS-------SVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ + + V G +D++ L+ G ++
Sbjct: 138 LYIIGGLVRRDSDSYIVTGEDAIQFLKKYRVSKLFLGTSTVDTKEGLMIFNYGDNFTKRA 197
Query: 108 IAHAASRFIVIGDESKR 124
AA + I + D SK
Sbjct: 198 FIDAADQVICLADSSKF 214
>gi|169335830|ref|ZP_02863023.1| hypothetical protein ANASTE_02256 [Anaerofustis stercorihominis DSM
17244]
gi|169258568|gb|EDS72534.1| hypothetical protein ANASTE_02256 [Anaerofustis stercorihominis DSM
17244]
Length = 269
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGST-AKEFMILLADKIANGFRVQVIP 53
K + A RAI +V D + +G GST + +LLA K +
Sbjct: 91 KSDIALRAIDHVEDNDIIYIGGGSTCIEFSKVLLASKYDYNLNIVTSC 138
>gi|283781047|ref|YP_003371802.1| DeoR family transcriptional regulator [Pirellula staleyi DSM 6068]
gi|283439500|gb|ADB17942.1| transcriptional regulator, DeoR family [Pirellula staleyi DSM 6068]
Length = 267
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 45/134 (33%), Gaps = 14/134 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----IANGFRVQVIPSSRNTEN 60
KR A A + V DG TL + GST E LL + + N V + +S + +
Sbjct: 81 DKKRQIAVAASRLVEDGDTLLLDGGSTTYELAQLLVGRPLQVVTNSLPVANLFTSSDRAD 140
Query: 61 F------CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL----REKIIAH 110
P + I +G+ + L E+ +
Sbjct: 141 LVLIGGYVHARTGVSLGPYANQMLSGLCVRRAIISVAGVSERGFFNSNLLLVETERAMMG 200
Query: 111 AASRFIVIGDESKR 124
AA IV+ D +K
Sbjct: 201 AADEVIVVADSTKF 214
>gi|317497019|ref|ZP_07955347.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895679|gb|EFV17833.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 255
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
KR A++A + + DG + + T ST I LA +I + S
Sbjct: 81 KRMIAKKAAELIHDGDMIFLDT-STTN---IELAREIIERRLEVTVVSCM 126
>gi|239625275|ref|ZP_04668306.1| DeoR-family transcriptional regulator [Clostridiales bacterium
1_7_47_FAA]
gi|239519505|gb|EEQ59371.1| DeoR-family transcriptional regulator [Clostridiales bacterium
1_7_47FAA]
Length = 254
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 18/135 (13%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----NGFRVQVIPSSRNTENF 61
K+ +A++ V D + + G+T EF L K N ++ ++ S +
Sbjct: 78 KKAIGEKAVELVRDEDVIAVDIGTTTLEFAKALVGKRKVTVLTNSMKIAMVLSEDSNIRV 137
Query: 62 CKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE------------KIIA 109
+ VS ++ D + + G +L + +I+
Sbjct: 138 IMLGGEVRSGEFSVSG-YMTDDNVSHFITDKYFLGVGGLSLTKGITDYHMAESNHRRIVI 196
Query: 110 HAASRFIVIGDESKR 124
+ I + D SK
Sbjct: 197 ANTQKVIALADHSKV 211
>gi|134098705|ref|YP_001104366.1| DeoR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|291003608|ref|ZP_06561581.1| DeoR family transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|133911328|emb|CAM01441.1| transcriptional regulator, DeoR family [Saccharopolyspora erythraea
NRRL 2338]
Length = 252
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTE 59
+ KR A A + DG ++ + +G+T E +LA + + + +
Sbjct: 77 EAKRRIAAEAGDLLTDGESVVLDSGTTTLELARVLAHRRLTVIPLDLHSTNALSTGPGVR 136
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL---------LREKIIA- 109
V + + D+ + + G + K A
Sbjct: 137 LLMPGGQTQPGELSFVGHLTETSLRALRTDTAVIGVCGLSVRHGLTAHDLAEVPVKQAAI 196
Query: 110 HAASRFIVIGDESKR 124
+A R I + D +K
Sbjct: 197 ASARRTIAVCDGTKF 211
>gi|167768089|ref|ZP_02440142.1| hypothetical protein CLOSS21_02634 [Clostridium sp. SS2/1]
gi|317499380|ref|ZP_07957648.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|167710418|gb|EDS20997.1| hypothetical protein CLOSS21_02634 [Clostridium sp. SS2/1]
gi|291561085|emb|CBL39885.1| transcriptional regulator, DeoR family [butyrate-producing
bacterium SSC/2]
gi|316893349|gb|EFV15563.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 252
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 43/148 (29%), Gaps = 19/148 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A +A + + DG T+ + +GS+ + L++ + + +
Sbjct: 71 ETKQRIAEKASEIISDGETIMVESGSSCALLVKYLSETKKDITVITNSSYIARFIRETEG 130
Query: 65 HHIPLHSP-------------------EDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ + VD G D + G
Sbjct: 131 GVTKVIVLGGEYQKEAEVMVGPLVKTCAEAFYVDKLFMGTDGYIPGIGFTSGDMLRAEAA 190
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGML 133
K +A + I++ D SK +
Sbjct: 191 KSMADSTRNSIILTDSSKFSEHGVVMQC 218
>gi|167644936|ref|YP_001682599.1| DeoR family transcriptional regulator [Caulobacter sp. K31]
gi|167347366|gb|ABZ70101.1| transcriptional regulator, DeoR family [Caulobacter sp. K31]
Length = 251
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 40/135 (29%), Gaps = 16/135 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTEN 60
K A ++V DG TL + +GST+ L + I N V
Sbjct: 78 AKTRIAEAVTKFVSDGDTLFLDSGSTSCFVAKALGEHRQLKIITNSLAVAQAIRKDKGHT 137
Query: 61 FCKIHHIPLHSPEDVS-----------SVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ + S LSI + L+ + +I
Sbjct: 138 LFLAGGELNAAYQSFSDRHAQEFLGGFRPSLSILTVGAVHPEHGLMDHSPSEAIMSRIAY 197
Query: 110 HAASRFIVIGDESKR 124
ASR ++ D+ K
Sbjct: 198 ATASRVLLAVDQGKF 212
>gi|281413101|ref|YP_003347180.1| DeoR family transcriptional regulator [Thermotoga naphthophila
RKU-10]
gi|281374204|gb|ADA67766.1| transcriptional regulator, DeoR family [Thermotoga naphthophila
RKU-10]
Length = 253
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ 50
+ K A+ A+ +V D + + +TA F LA + +
Sbjct: 76 EAKERIAQLALDFVEDNDIIFLDASTTAHIFARHLASSQKSVHVIT 121
>gi|21911196|ref|NP_665464.1| putative lactose phosphotransferase system repressor protein
[Streptococcus pyogenes MGAS315]
gi|28896570|ref|NP_802920.1| lactose phosphotransferase system repressor protein [Streptococcus
pyogenes SSI-1]
gi|21905408|gb|AAM80267.1| putative lactose phosphotransferase system repressor protein
[Streptococcus pyogenes MGAS315]
gi|28811824|dbj|BAC64753.1| putative lactose phosphotransferase system repressor protein
[Streptococcus pyogenes SSI-1]
Length = 257
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTTEKKQIAQRAKNIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|289550195|ref|YP_003471099.1| Lactose phosphotransferase system repressor [Staphylococcus
lugdunensis HKU09-01]
gi|315659174|ref|ZP_07912038.1| lactose PTS family porter repressor [Staphylococcus lugdunensis
M23590]
gi|289179727|gb|ADC86972.1| Lactose phosphotransferase system repressor [Staphylococcus
lugdunensis HKU09-01]
gi|315495599|gb|EFU83930.1| lactose PTS family porter repressor [Staphylococcus lugdunensis
M23590]
Length = 251
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
+ K+ A++A+ + + T+ +G G+T + LLA+ I + VI +
Sbjct: 78 EQKKEVAQKAVSLIEESDTIFLGPGTT----IELLAN-IMEKEYLTVITNC 123
>gi|319938824|ref|ZP_08013188.1| DeoR family Transcription regulator [Streptococcus anginosus
1_2_62CV]
gi|319811874|gb|EFW08140.1| DeoR family Transcription regulator [Streptococcus anginosus
1_2_62CV]
Length = 247
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRKIAQEAAKIVADNETIIIESGSTCALLAEEICRTKKNVKIITNSYFIADYVRKIDSCK 131
Query: 67 IPLHSPE-------DVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
I L E V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQNDSQVTVGPLLKEMIQFFHVEHAFVGTDGYDEELGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 EASDKMIVLTDSSKF 206
>gi|194367590|ref|YP_002030200.1| DNA-binding transcriptional regulator AgaR [Stenotrophomonas
maltophilia R551-3]
gi|194350394|gb|ACF53517.1| transcriptional regulator, DeoR family [Stenotrophomonas
maltophilia R551-3]
Length = 258
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 32/143 (22%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
+K + RA + V G + + +GST LA + V V+ +
Sbjct: 79 LKESIGARAARLVQPGDNIIIDSGSTTMT----LARHLRAHRDVTVMTNGLNIAWELANA 134
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ + + + ++ L +DG D + + A
Sbjct: 135 AGITVLLTGGLLRQQSLSLQGSQAEASLNSYSFDTLFLGVDGLDL----QFGLTTHDEAE 190
Query: 103 LREK-IIAHAASRFIVIGDESKR 124
R + A R +V+ D SK
Sbjct: 191 ARLNHRMVERARRIVVLTDASKF 213
>gi|15675732|ref|NP_269906.1| putative lactose phosphotransferase system repressor protein
[Streptococcus pyogenes M1 GAS]
gi|19746842|ref|NP_607978.1| lactose phosphotransferase system repressor protein [Streptococcus
pyogenes MGAS8232]
gi|71911452|ref|YP_283002.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS5005]
gi|94989272|ref|YP_597373.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS9429]
gi|94993161|ref|YP_601260.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS2096]
gi|139474419|ref|YP_001129135.1| lactose phosphotransferase system repressor 2 [Streptococcus
pyogenes str. Manfredo]
gi|306826632|ref|ZP_07459936.1| lactose PTS family porter repressor [Streptococcus pyogenes ATCC
10782]
gi|13622952|gb|AAK34627.1| putative lactose phosphotransferase system repressor protein
[Streptococcus pyogenes M1 GAS]
gi|19749082|gb|AAL98477.1| putative lactose phosphotransferase system repressor protein
[Streptococcus pyogenes MGAS8232]
gi|71854234|gb|AAZ52257.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS5005]
gi|94542780|gb|ABF32829.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS9429]
gi|94546669|gb|ABF36716.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS2096]
gi|134272666|emb|CAM30935.1| lactose phosphotransferase system repressor 2 [Streptococcus
pyogenes str. Manfredo]
gi|304431159|gb|EFM34164.1| lactose PTS family porter repressor [Streptococcus pyogenes ATCC
10782]
Length = 257
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTTEKKQIAQRAKNIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|320533103|ref|ZP_08033835.1| DeoR-like helix-turn-helix protein [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134675|gb|EFW26891.1| DeoR-like helix-turn-helix protein [Actinomyces sp. oral taxon 171
str. F0337]
Length = 255
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++KR A+ + + DG + + +G+T + LA +
Sbjct: 79 EIKRRLAQATAELIEDGEAVIIDSGTTCEMVAEQLAGR 116
>gi|315924708|ref|ZP_07920925.1| DeoR family transcriptional regulator, DeoR [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621607|gb|EFV01571.1| DeoR family transcriptional regulator, DeoR [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 267
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 7 KRNAARRAIQY----VVDGMTLGMGTGSTAKEFMILL--ADKI 43
K+ A A +Y + LG+ GST + L A +I
Sbjct: 26 KKLVALEAARYLQRIITKDDVLGITWGSTIYHMINYLNPAQRI 68
>gi|294788544|ref|ZP_06753786.1| succinyl-CoA:Coenzyme A transferase [Simonsiella muelleri ATCC
29453]
gi|294483421|gb|EFG31106.1| succinyl-CoA:Coenzyme A transferase [Simonsiella muelleri ATCC
29453]
Length = 504
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 25/216 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGST---------AKEFMILLADKIANGFRVQVIPSSRN 57
K A +A +++ +GMTLG+ TG T A+ AN + + +
Sbjct: 14 KIMTAEQAAEFIQNGMTLGI-TGFTGAGYPKALPTAIANKAKAEHAANRPFSVGVITGAS 72
Query: 58 TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF-- 115
T C + S + I++ + + + +++ +F
Sbjct: 73 TAPECDGMLAEAGAIHFRSPFQSDPTLRNNINAGNIHYQDMHLSHVEQQMRQGFYGKFDV 132
Query: 116 -----IVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKEVASCFGLNEELRLRRNGSG 170
I ++ K + +G G E+ + + E + ++
Sbjct: 133 AIIEASGITEDGKIIPAMGIGHAN-EVLKVADKIIIEVNTEQNAKLEGMHDIAFDIG--- 188
Query: 171 LFVSDGGNYI-VDAFFGFIPDPQIISGELCNIPGVI 205
V I + F I P + +L I ++
Sbjct: 189 --VPPHRKPIPIVGTFDRIGSPY-LECDLDKIVAIV 221
>gi|164686222|ref|ZP_02210252.1| hypothetical protein CLOBAR_02660 [Clostridium bartlettii DSM
16795]
gi|164601824|gb|EDQ95289.1| hypothetical protein CLOBAR_02660 [Clostridium bartlettii DSM
16795]
Length = 325
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 2 DALQMKRNAARRAIQY----VVDGMTLGMGTGSTAKEFMI 37
Q+KR A A +Y + D + +G+ GST E +
Sbjct: 93 TDEQLKRRVAIEAGEYLRSILKDDILIGINWGSTVYEIVK 132
>gi|315301326|ref|ZP_07872533.1| DeoR family transcriptional regulator [Listeria ivanovii FSL
F6-596]
gi|313630308|gb|EFR98234.1| DeoR family transcriptional regulator [Listeria ivanovii FSL
F6-596]
Length = 254
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFTRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G G+ L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGSNLIENIHA 166
>gi|56808038|ref|ZP_00365838.1| COG1349: Transcriptional regulators of sugar metabolism
[Streptococcus pyogenes M49 591]
gi|209560072|ref|YP_002286544.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
NZ131]
gi|209541273|gb|ACI61849.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
NZ131]
Length = 257
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTTEKKQIAQRAKNIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|94995132|ref|YP_603230.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS10750]
gi|94548640|gb|ABF38686.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS10750]
Length = 257
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTTEKKQIAQRAKNIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|50914994|ref|YP_060966.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS10394]
gi|50904068|gb|AAT87783.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS10394]
Length = 257
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTTEKKQIAQRAKNIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|71904291|ref|YP_281094.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS6180]
gi|94991217|ref|YP_599317.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS10270]
gi|71803386|gb|AAX72739.1| lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS6180]
gi|94544725|gb|ABF34773.1| Lactose phosphotransferase system repressor [Streptococcus pyogenes
MGAS10270]
Length = 257
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA + DG T+ +G G+T + + L ++
Sbjct: 80 QTTEKKQIAQRAKNIIKDGETVFIGPGTTLEHLAVELKNR 119
>gi|315222505|ref|ZP_07864394.1| DeoR-like helix-turn-helix protein [Streptococcus anginosus F0211]
gi|315188191|gb|EFU21917.1| DeoR-like helix-turn-helix protein [Streptococcus anginosus F0211]
Length = 247
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRKIAQEAAKIVADNETIIIESGSTCALLAEEICRTKKNVKIITNSYFIADYVRKVDSCK 131
Query: 67 IPLHSPE-------DVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
I L E V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQNDSQVTVGPLLKEMIQFFHVEHAFVGTDGYDEELGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 EASDKMIVLTDSSKF 206
>gi|256391303|ref|YP_003112867.1| DeoR family transcriptional regulator [Catenulispora acidiphila DSM
44928]
gi|256357529|gb|ACU71026.1| transcriptional regulator, DeoR family [Catenulispora acidiphila
DSM 44928]
Length = 263
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 44/147 (29%), Gaps = 26/147 (17%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD-----------KIAN--GF 47
M+ K AR A V G +G+ GST L ++A+
Sbjct: 75 MEQP-AKDAIARTAAALVRPGTAIGISGGSTTYTLARHLVGVPDLTVVTNSLRVADVLHA 133
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA------ 101
P + T P + V + + +D + G A
Sbjct: 134 HESASPGNNQTVILTGGMRTPSEAL--VGPIAVQAIRTLHLDQVFLGVYGMDAAAGYTSP 191
Query: 102 LLRE----KIIAHAASRFIVIGDESKR 124
L E + + AA +V+ D +K
Sbjct: 192 NLMESETNRALVAAARNLVVVADHTKW 218
>gi|266620537|ref|ZP_06113472.1| transcriptional regulator, DeoR family [Clostridium hathewayi DSM
13479]
gi|288867831|gb|EFD00130.1| transcriptional regulator, DeoR family [Clostridium hathewayi DSM
13479]
Length = 259
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI 43
K + A V T+ + +GST + + D +
Sbjct: 85 KELIGKFAATLVEPNDTVIIDSGSTTEHLAHYIPDSM 121
>gi|222100474|ref|YP_002535042.1| Transcriptional regulator, DeoR family [Thermotoga neapolitana DSM
4359]
gi|221572864|gb|ACM23676.1| Transcriptional regulator, DeoR family [Thermotoga neapolitana DSM
4359]
Length = 252
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ 50
+ K A+ A+ +V D + + +TA F LA + +
Sbjct: 76 EAKERIAQLALDFVEDNDIIFLDASTTAHIFARHLASSQKSVHVIT 121
>gi|154508696|ref|ZP_02044338.1| hypothetical protein ACTODO_01202 [Actinomyces odontolyticus ATCC
17982]
gi|153798330|gb|EDN80750.1| hypothetical protein ACTODO_01202 [Actinomyces odontolyticus ATCC
17982]
Length = 249
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 16/139 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK--IANGFRVQVIPSSRNTE 59
D +++K AR A + D + + G+T + LA K + ++ ++ +
Sbjct: 71 DRVEIKERIARAAADMIHDDDRIMIEAGTTCALIVKYLAGKRGVQVLTNSVLVFANARSN 130
Query: 60 NFCKIHHIPLHSPEDVSSV--------------DLSIDGFDEIDSRLRLIKGYGGALLRE 105
I H + S+ ++ G D L
Sbjct: 131 PNLNITLTGGHFRAESESLVGPVAERAINDFNARVAFLGTDGFSVDRGLTTQLVEGGQVG 190
Query: 106 KIIAHAASRFIVIGDESKR 124
I+ A ++ D SK
Sbjct: 191 SIMRTRAQETWLLADSSKY 209
>gi|268319052|ref|YP_003292708.1| Lactose phosphotransferase system repressor [Lactobacillus
johnsonii FI9785]
gi|262397427|emb|CAX66441.1| Lactose phosphotransferase system repressor [Lactobacillus
johnsonii FI9785]
Length = 254
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ AA+ A + V D T+ +G G+T + + L K
Sbjct: 80 KQAAAKVASKIVQDDETIYVGPGTTLEFMVAKLNQK 115
>gi|192289968|ref|YP_001990573.1| DeoR family transcriptional regulator [Rhodopseudomonas palustris
TIE-1]
gi|192283717|gb|ACF00098.1| transcriptional regulator, DeoR family [Rhodopseudomonas palustris
TIE-1]
Length = 266
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K++ A ++YV DG +L +G G+T++ L +P
Sbjct: 86 EAKQSIAAAVVRYVNDGDSLSLGIGTTSQFVAEALLSHRRLKIVTNNLP 134
>gi|304312366|ref|YP_003811964.1| CoA-transferase, alpha subunit [gamma proteobacterium HdN1]
gi|301798099|emb|CBL46321.1| CoA-transferase, alpha subunit [gamma proteobacterium HdN1]
Length = 291
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 4/28 (14%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGT 28
M+ K +A+ AI+++ DGMT+G+G
Sbjct: 1 MN----KVQSAQEAIRHIRDGMTIGIGG 24
>gi|302548219|ref|ZP_07300561.1| coenzyme A transferase-related protein [Streptomyces
hygroscopicus ATCC 53653]
gi|302465837|gb|EFL28930.1| coenzyme A transferase-related protein [Streptomyces
himastatinicus ATCC 53653]
Length = 288
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGT-GS 30
KR +A A+ + GMT+G+G GS
Sbjct: 4 KRMSAEEAVGGIESGMTVGIGGWGS 28
>gi|145628049|ref|ZP_01783850.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
22.1-21]
gi|145637313|ref|ZP_01792974.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
PittHH]
gi|144979824|gb|EDJ89483.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
22.1-21]
gi|145269565|gb|EDK09507.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
PittHH]
Length = 252
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRVQVIPSS 55
K +++A++ + + T+ + G+T E +A++ IA+ V +
Sbjct: 79 KAAISKKAVELIQEHSTIYLDAGTTTLEIAKQIANRNDLLVITNDFVIAHYLMVNSQCNI 138
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY----GGALLREKIIAHA 111
+T + + I + +KG + +K I
Sbjct: 139 MHTGGLINKSNRSSVGEFAAQFLRQISVDIAFISTSSWNLKGLTTPDEQKIPVKKAIIQF 198
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
+ + I++ D SK + P+
Sbjct: 199 SQKNILVTDSSKYGKVATFLLYPL 222
>gi|145638171|ref|ZP_01793781.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
PittII]
gi|145272500|gb|EDK12407.1| glycerol-3-phosphate regulon repressor [Haemophilus influenzae
PittII]
Length = 252
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRVQVIPSS 55
K +++A++ + + T+ + G+T E +A++ IA+ V +
Sbjct: 79 KAAISKKAVELIQEHSTIYLDAGTTTLEIAKQIANRNDLLVITNDFVIAHYLMVNSQCNI 138
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY----GGALLREKIIAHA 111
+T + + I + +KG + +K I
Sbjct: 139 MHTGGLINKSNRSSVGEFAAQFLRQISVDIAFISTSSWNLKGLTTPDEQKIPVKKAIIQF 198
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
+ + I++ D SK + P+
Sbjct: 199 SQKNILVTDSSKYGKVATFLLYPL 222
>gi|325848816|ref|ZP_08170326.1| transcriptional regulator, DeoR family [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480460|gb|EGC83522.1| transcriptional regulator, DeoR family [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 253
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
K+ A +AI+Y+ D ++ + GST LA IA + ++
Sbjct: 81 KKLIASKAIKYIEDDQSIALD-GSTTCY---ELAKLIAKTKLRLTVITN 125
>gi|310641242|ref|YP_003946000.1| transcriptional regulator, deor family [Paenibacillus polymyxa SC2]
gi|309246192|gb|ADO55759.1| Transcriptional regulator, DeoR family [Paenibacillus polymyxa SC2]
Length = 248
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 24/138 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K AR A + ++DG + + G+T + + V V+ + +
Sbjct: 77 QQKNAVARMAAKEILDGECIYLDAGTTTMAMIPYI-----EAKDVTVVTNGLSHVEALVS 131
Query: 65 HHIPLHSPEDVSSVD-------LSIDGFDEIDSRLRLIKGYGGAL------------LRE 105
I + + + +++ D + G + L +
Sbjct: 132 KRIRSYLLGGMMKIHTKAVIGSIALQNLDNFRFDKCFLGTNGVDVEMGYTTPDPEEALIK 191
Query: 106 KIIAHAASRFIVIGDESK 123
+ + + V+ D SK
Sbjct: 192 RRAHQLSGKTYVLADSSK 209
>gi|34496131|ref|NP_900346.1| glucitol operon repressor [Chromobacterium violaceum ATCC 12472]
gi|34101985|gb|AAQ58352.1| glucitol operon repressor [Chromobacterium violaceum ATCC 12472]
Length = 240
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 30/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + AR A + D + + +G+T + LL +K V + S ++ +
Sbjct: 55 KLSIARAAADRIRDHNRVIIDSGTTTSAMIPLLGNK---RGLVVMTNSLNVAGQLRELEN 111
Query: 67 IPLHSPE-----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
P+ D + + DG D + G +
Sbjct: 112 EPILLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLERGTTTFNELVGLS-- 169
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A IV+ + K + LP
Sbjct: 170 --RVMAEVAREVIVMVESEKIGRRIPNLELP 198
>gi|238920229|ref|YP_002933744.1| transcriptional regulator, DeoR family [Edwardsiella ictaluri
93-146]
gi|238869798|gb|ACR69509.1| transcriptional regulator, DeoR family [Edwardsiella ictaluri
93-146]
Length = 198
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 11/135 (8%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRV 49
M +K++ A + DG T+ + +GST LA++ IA+ +
Sbjct: 27 MINFTLKQSLAADTASLLSDGETIFIESGSTNALLARYLAERKQVTRVTVSTYIAHLLKE 86
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
K + + + G+ G + +
Sbjct: 87 TGCDVILMGGLHQKRRETVVGPLTHLGIQQVYFSKASIGIDGFHPESGFTGCDMMCSAVL 146
Query: 110 HAASRFIVIGDESKR 124
I++ D SK
Sbjct: 147 AKGVENIILTDASKF 161
>gi|289433669|ref|YP_003463541.1| transcriptional regulator, DeoR family [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289169913|emb|CBH26453.1| transcriptional regulator, DeoR family [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 254
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFTRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G G+ L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGSNLIENIHA 166
>gi|323343939|ref|ZP_08084166.1| lactose PTS family porter repressor [Prevotella oralis ATCC 33269]
gi|323095758|gb|EFZ38332.1| lactose PTS family porter repressor [Prevotella oralis ATCC 33269]
Length = 263
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVI-PSSRNTENFCK 63
+ K+ R A + + ++ +G+G+T M LA +I R+ V+ S + +E +
Sbjct: 82 EEKQGIGREAAKLITRDDSIIIGSGTT----MHALAGQIRPIHRLTVVAASLQVSEILAQ 137
Query: 64 IHHIPLHSPE---DVSSVDLSIDGFDEIDSRLRLIK---GYGGALLR------------- 104
I + SS+ + D I K G G
Sbjct: 138 NDSIDIIQLGGMVRHSSLSVVGQYCDAILQDCSFTKLFLGVDGIDFDFGFTTTDIREAEL 197
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + H A + I++ D SK
Sbjct: 198 NRKMMHVAQKTIILADSSKF 217
>gi|225872513|ref|YP_002753968.1| transcriptional regulator, DeoR family [Acidobacterium capsulatum
ATCC 51196]
gi|225791500|gb|ACO31590.1| transcriptional regulator, DeoR family [Acidobacterium capsulatum
ATCC 51196]
Length = 253
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 19/137 (13%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTE 59
Q K+ A A++ V +G + + +G+T L I N + +S N E
Sbjct: 78 QEKQRIAAAAVKMVEEGQCVMLDSGTTTAAIASELKQFSQLTVITNAMNIAAELASTNME 137
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA----LLR--------EKI 107
+ +S V + + D +E+ + + + G L +
Sbjct: 138 VILIGGTLRKNSFSLVGPL--AEDVLEEMHADILFLGVDGFDVEIGLTTPNFLESRVNRA 195
Query: 108 IAHAASRFIVIGDESKR 124
+ AA R + + D +K
Sbjct: 196 MVKAARRVVTVCDSTKF 212
>gi|222153575|ref|YP_002562752.1| lactose phosphotransferase system repressor 1 [Streptococcus uberis
0140J]
gi|222114388|emb|CAR43143.1| lactose phosphotransferase system repressor 1 [Streptococcus uberis
0140J]
Length = 255
Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A A + DG T+ +G G+T + F L DK
Sbjct: 77 QTKEKKEIASFAATLINDGETIFIGPGTTLEFFAEQLIDK 116
>gi|317132441|ref|YP_004091755.1| transcriptional regulator, DeoR family [Ethanoligenens harbinense
YUAN-3]
gi|315470420|gb|ADU27024.1| transcriptional regulator, DeoR family [Ethanoligenens harbinense
YUAN-3]
Length = 260
Score = 36.4 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K++ A RA + DG +L + +G+T LA +A ++ V+ +S + I
Sbjct: 77 EEKQSIAERAAALIEDGDSLLIDSGTTTLY----LAPHLARFKQLTVVTNSIHLLQQLSI 132
Query: 65 HH 66
+
Sbjct: 133 YP 134
>gi|213026083|ref|ZP_03340530.1| DNA-bindng transcriptional repressor SrlR [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
Length = 143
Score = 36.4 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
K A A++Y+ DG ++ + GST + + LL+
Sbjct: 22 KKALIAAAAVKYIHDGDSIILDAGSTVLQMVPLLSR 57
>gi|308068387|ref|YP_003869992.1| transcriptional regulator of sugar metabolism [Paenibacillus
polymyxa E681]
gi|305857666|gb|ADM69454.1| Transcriptional regulator of sugar metabolism [Paenibacillus
polymyxa E681]
Length = 249
Score = 36.4 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 24/138 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K AR A + ++DG + + G+T + + V V+ + +
Sbjct: 78 QQKNAVARIAAKEILDGECIYLDAGTTTMAMIPYI-----EAKDVTVVTNGLSHVEALVS 132
Query: 65 HHIPLHSPEDVSSVD-------LSIDGFDEIDSRLRLIKGYGGAL------------LRE 105
I + + + +++ D + G + L +
Sbjct: 133 KRIRSYLLGGMMKIHTKAVIGSIALQNLDNFRFDKCFLGTNGVDMEMGYTTPDPEEALIK 192
Query: 106 KIIAHAASRFIVIGDESK 123
+ + + V+ D SK
Sbjct: 193 RRAHQLSGKTYVLADSSK 210
>gi|86140089|ref|ZP_01058652.1| transcriptional regulator, DeoR family protein [Roseobacter sp.
MED193]
gi|85823184|gb|EAQ43396.1| transcriptional regulator, DeoR family protein [Roseobacter sp.
MED193]
Length = 268
Score = 36.4 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A + +VDGMT+ + GST L + + V+ +S H+
Sbjct: 87 KAQIAAAVMPQIVDGMTVFLDVGSTTSFVAEALRQR----RNLTVVTNSIGVAQLLANHN 142
Query: 67 IPLHSP 72
Sbjct: 143 GNRLHL 148
>gi|293189040|ref|ZP_06607772.1| DeoR-family transcriptional regulator [Actinomyces odontolyticus
F0309]
gi|292822071|gb|EFF80998.1| DeoR-family transcriptional regulator [Actinomyces odontolyticus
F0309]
Length = 279
Score = 36.4 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 16/139 (11%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK--IANGFRVQVIPSSRNTE 59
D +++K AR A + D + + G+T + LA K + ++ ++ +
Sbjct: 101 DRVEIKERIARAAADMIHDDDRIMIEAGTTCALIVKYLAGKRGVQVLTNSVLVFANARSN 160
Query: 60 NFCKIHHIPLHSPEDVSSV--------------DLSIDGFDEIDSRLRLIKGYGGALLRE 105
I H + S+ ++ G D L
Sbjct: 161 PNLNITLTGGHFRAESESLVGPVAERAINDFNARVAFLGTDGFSVDRGLTTQLVEGGQVG 220
Query: 106 KIIAHAASRFIVIGDESKR 124
I+ A ++ D SK
Sbjct: 221 SIMRTRAQETWLLADSSKY 239
>gi|295099947|emb|CBK89036.1| Transcriptional regulators of sugar metabolism [Eubacterium
cylindroides T2-87]
Length = 255
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ + A + + DG + + +G+T + L + V PS+
Sbjct: 84 KQRICKEAAKSIRDGDCVYIDSGTTPVYLLDYL----QDKKITLVTPSTFLIRKLSANFK 139
Query: 67 IPLHSP 72
++
Sbjct: 140 GDIYLL 145
>gi|229160379|ref|ZP_04288377.1| Transcriptional regulator, DeoR [Bacillus cereus R309803]
gi|228623103|gb|EEK79931.1| Transcriptional regulator, DeoR [Bacillus cereus R309803]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|119961758|ref|YP_947244.1| DeoR family transcriptional regulator [Arthrobacter aurescens TC1]
gi|119948617|gb|ABM07528.1| putative transcriptional regulator, DeoR family [Arthrobacter
aurescens TC1]
Length = 263
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 31/151 (20%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------------- 39
D + K+ A A + G +G+ G+T LL
Sbjct: 73 DHAEAKQEIALAASALIRPGAVIGLSGGTTNTALAQLLSTREDLNAPSHTPTLTVVTNAI 132
Query: 40 --ADKIANGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSS----VDLSIDGFDEIDSRLR 93
A ++A ++++ + + + DV +D++ G + +D L
Sbjct: 133 NIASQLAVRPNIKIMVTG---GILNPRSYELVGPYTDVIMQKVALDIAFIGVNGVDPDLG 189
Query: 94 LIKGYGGALLREKIIAHAASRFIVIGDESKR 124
G + ++A A+ V+ D SK
Sbjct: 190 PTITDEGEAMVNTVMARRATESYVVADSSKV 220
>gi|75759329|ref|ZP_00739426.1| Transcriptional regulator, DeoR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896359|ref|YP_002444770.1| transcriptional regulator, DeoR family [Bacillus cereus G9842]
gi|228900008|ref|ZP_04064244.1| Transcriptional regulator, DeoR [Bacillus thuringiensis IBL 4222]
gi|228907059|ref|ZP_04070923.1| Transcriptional regulator, DeoR [Bacillus thuringiensis IBL 200]
gi|228938542|ref|ZP_04101150.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228957698|ref|ZP_04119444.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228964387|ref|ZP_04125502.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228971421|ref|ZP_04132047.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978034|ref|ZP_04138413.1| Transcriptional regulator, DeoR [Bacillus thuringiensis Bt407]
gi|229043167|ref|ZP_04190891.1| Transcriptional regulator, DeoR [Bacillus cereus AH676]
gi|229108882|ref|ZP_04238487.1| Transcriptional regulator, DeoR [Bacillus cereus Rock1-15]
gi|229144031|ref|ZP_04272447.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-ST24]
gi|296502008|ref|YP_003663708.1| DeoR family transcriptional regulator [Bacillus thuringiensis
BMB171]
gi|74493161|gb|EAO56280.1| Transcriptional regulator, DeoR family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218542711|gb|ACK95105.1| transcriptional regulator, DeoR family [Bacillus cereus G9842]
gi|228639428|gb|EEK95842.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-ST24]
gi|228674651|gb|EEL29890.1| Transcriptional regulator, DeoR [Bacillus cereus Rock1-15]
gi|228726174|gb|EEL77407.1| Transcriptional regulator, DeoR [Bacillus cereus AH676]
gi|228781695|gb|EEM29894.1| Transcriptional regulator, DeoR [Bacillus thuringiensis Bt407]
gi|228788288|gb|EEM36241.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228795327|gb|EEM42818.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228801994|gb|EEM48865.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228821140|gb|EEM67157.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228852563|gb|EEM97353.1| Transcriptional regulator, DeoR [Bacillus thuringiensis IBL 200]
gi|228859622|gb|EEN04046.1| Transcriptional regulator, DeoR [Bacillus thuringiensis IBL 4222]
gi|296323060|gb|ADH05988.1| DeoR family transcriptional regulator [Bacillus thuringiensis
BMB171]
gi|326939051|gb|AEA14947.1| DeoR family transcriptional regulator [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|309751327|gb|ADO81311.1| Probable transcriptional regulator [Haemophilus influenzae R2866]
Length = 256
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFRVQVIPSS 55
K +++A++ + + T+ + G+T E +A++ IA+ V +
Sbjct: 83 KAAISKKAVELIQEHSTIYLDAGTTTLEIAKQIANRNDLLVITNDFVIAHYLMVNSQCNI 142
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY----GGALLREKIIAHA 111
+T + + I + +KG + +K I
Sbjct: 143 MHTGGLINKSNRSSVGEFAAQFLRQISVDIAFISTSSWNLKGLTTPDEQKIPVKKAIIQF 202
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
+ + I++ D SK + P+
Sbjct: 203 SQKNILVTDSSKYGKVATFLLYPL 226
>gi|15643827|ref|NP_228875.1| DeoR family transcriptional regulator [Thermotoga maritima MSB8]
gi|4981613|gb|AAD36146.1|AE001767_2 transcriptional regulator, DeoR family [Thermotoga maritima MSB8]
Length = 252
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ 50
+ K A+ A+ +V DG + + +TA F LA + +
Sbjct: 76 EAKEKIAQLALNFVEDGDIIFLDASTTAHIFAKHLASSQKSVHVIT 121
>gi|311277894|ref|YP_003940125.1| transcriptional regulator, DeoR family [Enterobacter cloacae SCF1]
gi|308747089|gb|ADO46841.1| transcriptional regulator, DeoR family [Enterobacter cloacae SCF1]
Length = 270
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----------- 54
+KR+ AR A + ++ G + + +G+T +A + V + +
Sbjct: 92 LKRSIARVAAEMILPGHRVILDSGTTTF----EIARLMRQHNDVIAMTNGMNVANALLEA 147
Query: 55 ------------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
R +++F + L +D D R A
Sbjct: 148 EGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAID--LERGVSTHNEDEAR 205
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L K+ A R IV+ D SK
Sbjct: 206 LNRKMCE-VAERIIVVTDSSKF 226
>gi|229029097|ref|ZP_04185196.1| Transcriptional regulator, DeoR [Bacillus cereus AH1271]
gi|228732377|gb|EEL83260.1| Transcriptional regulator, DeoR [Bacillus cereus AH1271]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|229057058|ref|ZP_04196451.1| Transcriptional regulator, DeoR [Bacillus cereus AH603]
gi|228720270|gb|EEL71847.1| Transcriptional regulator, DeoR [Bacillus cereus AH603]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|229172066|ref|ZP_04299631.1| Transcriptional regulator, DeoR [Bacillus cereus MM3]
gi|228611409|gb|EEK68666.1| Transcriptional regulator, DeoR [Bacillus cereus MM3]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|42780516|ref|NP_977763.1| DeoR family transcriptional regulator [Bacillus cereus ATCC 10987]
gi|206977521|ref|ZP_03238415.1| transcriptional regulator, DeoR family [Bacillus cereus H3081.97]
gi|217958903|ref|YP_002337451.1| transcriptional regulator, DeoR family [Bacillus cereus AH187]
gi|222095061|ref|YP_002529121.1| transcriptional regulator, deor family [Bacillus cereus Q1]
gi|229138113|ref|ZP_04266711.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-ST26]
gi|229195623|ref|ZP_04322389.1| Transcriptional regulator, DeoR [Bacillus cereus m1293]
gi|42736436|gb|AAS40371.1| transcriptional regulator, DeoR family [Bacillus cereus ATCC 10987]
gi|206744239|gb|EDZ55652.1| transcriptional regulator, DeoR family [Bacillus cereus H3081.97]
gi|217064486|gb|ACJ78736.1| transcriptional regulator, DeoR family [Bacillus cereus AH187]
gi|221239119|gb|ACM11829.1| transcriptional regulator, DeoR family [Bacillus cereus Q1]
gi|228587872|gb|EEK45924.1| Transcriptional regulator, DeoR [Bacillus cereus m1293]
gi|228645458|gb|EEL01692.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-ST26]
gi|324325444|gb|ADY20704.1| transcriptional regulator, DeoR family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|329923969|ref|ZP_08279273.1| putative HTH-type transcriptional repressor GlcR [Paenibacillus sp.
HGF5]
gi|328940928|gb|EGG37235.1| putative HTH-type transcriptional repressor GlcR [Paenibacillus sp.
HGF5]
Length = 253
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 15/106 (14%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K + A V DG + + +G+T +A + + + VI + N
Sbjct: 79 KIRIGQLAASLVEDGENIIIDSGTTTLH----IATHLVHRSDITVITNDMN--------- 125
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
D + + + G E+ ++ G + + + A
Sbjct: 126 -VAVELRDAPGIKVILTGG-ELYPSSYMLNGMFTNHVLKSLHVEKA 169
>gi|224034063|gb|ACN36107.1| unknown [Zea mays]
Length = 103
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 22 MTLGMGTGSTAKEFMILLADKIANGFR--VQVIPSSRNTENFCKIHHIPLHSPED 74
M +G+G+G + + L ++ G + + SS + + I +S ++
Sbjct: 1 MVVGLGSGPASALAIQYLGTRLRRGSLAGITAVTSSVLSASEADKAGIRANSYQE 55
>gi|163802683|ref|ZP_02196574.1| pyruvate kinase [Vibrio sp. AND4]
gi|159173571|gb|EDP58391.1| pyruvate kinase [Vibrio sp. AND4]
Length = 253
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A A + D + + +GST + L K +AN ++ P+
Sbjct: 79 KLSLATAAASLIRDHNRIVIDSGSTTAALIQQLNHKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + +G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGIDLERGTTTFNELFGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESEKV 212
>gi|146284498|ref|YP_001174651.1| transcriptional regulator [Pseudomonas stutzeri A1501]
gi|145572703|gb|ABP81809.1| probable transcriptional regulator [Pseudomonas stutzeri A1501]
gi|327482887|gb|AEA86197.1| transcriptional regulator [Pseudomonas stutzeri DSM 4166]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 28/150 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS----------- 55
K+ AR A+ + + + + +G+T + L +G V +
Sbjct: 78 KQAIARAAVGCIREHARIIIDSGTTTAAMIPQLGH--KHGLVVMTNSLNVVNALRELEHE 135
Query: 56 -----------RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
++E+F + D + + DG D L
Sbjct: 136 PVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLERGTTTF----NELLGL 191
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+++A A IV+ + K + LP
Sbjct: 192 SRVMADVAREVIVLAEADKIGRRIPNLELP 221
>gi|30261429|ref|NP_843806.1| DeoR family transcriptional regulator [Bacillus anthracis str.
Ames]
gi|47526613|ref|YP_017962.1| DeoR family transcriptional regulator [Bacillus anthracis str.
'Ames Ancestor']
gi|49184259|ref|YP_027511.1| DeoR family transcriptional regulator [Bacillus anthracis str.
Sterne]
gi|49477188|ref|YP_035553.1| DeoR family transcriptional regulator [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52144009|ref|YP_082819.1| DeoR family transcriptional regulator [Bacillus cereus E33L]
gi|65318695|ref|ZP_00391654.1| COG1349: Transcriptional regulators of sugar metabolism [Bacillus
anthracis str. A2012]
gi|165870356|ref|ZP_02215011.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0488]
gi|167634407|ref|ZP_02392728.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0442]
gi|167639255|ref|ZP_02397527.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0193]
gi|170686701|ref|ZP_02877921.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0465]
gi|170706353|ref|ZP_02896814.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0389]
gi|177651572|ref|ZP_02934361.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0174]
gi|190568109|ref|ZP_03021019.1| transcriptional regulator, DeoR family [Bacillus anthracis
Tsiankovskii-I]
gi|196035371|ref|ZP_03102776.1| transcriptional regulator, DeoR family [Bacillus cereus W]
gi|196040607|ref|ZP_03107906.1| transcriptional regulator, DeoR family [Bacillus cereus NVH0597-99]
gi|196046557|ref|ZP_03113782.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB108]
gi|218902534|ref|YP_002450368.1| transcriptional regulator, DeoR family [Bacillus cereus AH820]
gi|227815829|ref|YP_002815838.1| transcriptional regulator, DeoR family [Bacillus anthracis str. CDC
684]
gi|228913998|ref|ZP_04077620.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228926457|ref|ZP_04089529.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228945025|ref|ZP_04107386.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229090380|ref|ZP_04221623.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-42]
gi|229120966|ref|ZP_04250208.1| Transcriptional regulator, DeoR [Bacillus cereus 95/8201]
gi|229183620|ref|ZP_04310843.1| Transcriptional regulator, DeoR [Bacillus cereus BGSC 6E1]
gi|229600055|ref|YP_002865842.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0248]
gi|254682513|ref|ZP_05146374.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. CNEVA-9066]
gi|254726173|ref|ZP_05187955.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. A1055]
gi|254733929|ref|ZP_05191643.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Western North America USA6153]
gi|254740381|ref|ZP_05198072.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Kruger B]
gi|254753771|ref|ZP_05205806.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Vollum]
gi|254758868|ref|ZP_05210895.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Australia 94]
gi|301052966|ref|YP_003791177.1| DeoR family transcriptional regulator [Bacillus anthracis CI]
gi|30255283|gb|AAP25292.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
Ames]
gi|47501761|gb|AAT30437.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
'Ames Ancestor']
gi|49178186|gb|AAT53562.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
Sterne]
gi|49328744|gb|AAT59390.1| transcriptional regulator, DeoR family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51977478|gb|AAU19028.1| transcriptional regulator, DeoR family [Bacillus cereus E33L]
gi|164713851|gb|EDR19373.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0488]
gi|167512694|gb|EDR88068.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0193]
gi|167530295|gb|EDR93021.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0442]
gi|170128887|gb|EDS97753.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0389]
gi|170669224|gb|EDT19967.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0465]
gi|172082850|gb|EDT67913.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0174]
gi|190560843|gb|EDV14818.1| transcriptional regulator, DeoR family [Bacillus anthracis
Tsiankovskii-I]
gi|195992048|gb|EDX56011.1| transcriptional regulator, DeoR family [Bacillus cereus W]
gi|196022741|gb|EDX61423.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB108]
gi|196028397|gb|EDX67005.1| transcriptional regulator, DeoR family [Bacillus cereus NVH0597-99]
gi|218536087|gb|ACK88485.1| transcriptional regulator, DeoR family [Bacillus cereus AH820]
gi|227006102|gb|ACP15845.1| transcriptional regulator, DeoR family [Bacillus anthracis str. CDC
684]
gi|228599863|gb|EEK57460.1| Transcriptional regulator, DeoR [Bacillus cereus BGSC 6E1]
gi|228662626|gb|EEL18224.1| Transcriptional regulator, DeoR [Bacillus cereus 95/8201]
gi|228692963|gb|EEL46681.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-42]
gi|228814694|gb|EEM60954.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228833281|gb|EEM78846.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228845603|gb|EEM90632.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229264463|gb|ACQ46100.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0248]
gi|300375135|gb|ADK04039.1| transcriptional regulator, DeoR family [Bacillus cereus biovar
anthracis str. CI]
Length = 260
Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|228951808|ref|ZP_04113906.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229068978|ref|ZP_04202271.1| Transcriptional regulator, DeoR [Bacillus cereus F65185]
gi|229078612|ref|ZP_04211169.1| Transcriptional regulator, DeoR [Bacillus cereus Rock4-2]
gi|229177834|ref|ZP_04305207.1| Transcriptional regulator, DeoR [Bacillus cereus 172560W]
gi|229189509|ref|ZP_04316525.1| Transcriptional regulator, DeoR [Bacillus cereus ATCC 10876]
gi|228593954|gb|EEK51757.1| Transcriptional regulator, DeoR [Bacillus cereus ATCC 10876]
gi|228605625|gb|EEK63073.1| Transcriptional regulator, DeoR [Bacillus cereus 172560W]
gi|228704682|gb|EEL57111.1| Transcriptional regulator, DeoR [Bacillus cereus Rock4-2]
gi|228714090|gb|EEL65972.1| Transcriptional regulator, DeoR [Bacillus cereus F65185]
gi|228807731|gb|EEM54252.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 260
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|148977481|ref|ZP_01814070.1| transcriptional regulator, DeoR family protein [Vibrionales
bacterium SWAT-3]
gi|145963276|gb|EDK28542.1| transcriptional regulator, DeoR family protein [Vibrionales
bacterium SWAT-3]
Length = 256
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + D + + +GST + L K +AN ++ P+
Sbjct: 79 KVSLAKAAADLIRDHNRIVIDSGSTTGALIQQLNSKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++++F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSDSFQGKVAESVLRAYDFDQLFIGADGIDLDRGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMVESEKV 212
>gi|212635900|ref|YP_002312425.1| ATP-NAD/AcoX kinase [Shewanella piezotolerans WP3]
gi|212557384|gb|ACJ29838.1| ATP-NAD/AcoX kinase [Shewanella piezotolerans WP3]
Length = 378
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 10 AARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
A AI+ + D + + +G+GST M L
Sbjct: 226 IAAEAIELMEDELIV-IGSGSTVAAVMEELG 255
>gi|229095913|ref|ZP_04226891.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-29]
gi|229102026|ref|ZP_04232739.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-28]
gi|229114865|ref|ZP_04244278.1| Transcriptional regulator, DeoR [Bacillus cereus Rock1-3]
gi|228668557|gb|EEL23986.1| Transcriptional regulator, DeoR [Bacillus cereus Rock1-3]
gi|228681413|gb|EEL35577.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-28]
gi|228687537|gb|EEL41437.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-29]
Length = 260
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|116494836|ref|YP_806570.1| lactose transport regulator [Lactobacillus casei ATCC 334]
gi|191638344|ref|YP_001987510.1| Transcription regulator of fructose operon [Lactobacillus casei
BL23]
gi|227535167|ref|ZP_03965216.1| DeoR family transcriptional regulator [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239631572|ref|ZP_04674603.1| lactose transport regulator [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066398|ref|YP_003788421.1| lactose transport regulator [Lactobacillus casei str. Zhang]
gi|116104986|gb|ABJ70128.1| transcriptional regulator, DeoR family [Lactobacillus casei ATCC
334]
gi|190712646|emb|CAQ66652.1| Transcription regulator of fructose operon [Lactobacillus casei
BL23]
gi|227187212|gb|EEI67279.1| DeoR family transcriptional regulator [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239526037|gb|EEQ65038.1| lactose transport regulator [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300438805|gb|ADK18571.1| lactose transport regulator [Lactobacillus casei str. Zhang]
Length = 249
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 14/133 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----KIANGFRVQVIPSSRNTENF 61
K+ A+ A++ + + + G+T + + LAD I G + +
Sbjct: 78 AKQTIAQAAVRQIEPDDLIFLDAGTTTAQLIPFLADIGVTVITTGVDNASLLADYQISTL 137
Query: 62 C----------KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ + D++ G + + L + +++ H
Sbjct: 138 MLGGMVKPTTKALIGATTAEALNHYRFDVAFIGTNGVHPEFGLTTPDPEEAVIKRLAIHQ 197
Query: 112 ASRFIVIGDESKR 124
AS+ +++ D SK
Sbjct: 198 ASKPVILADPSKF 210
>gi|295095845|emb|CBK84935.1| transcriptional regulator, DeoR family [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 252
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K+ ARR Q + G + + G+T E + L
Sbjct: 73 KMDAKKRVARRGAQLISPGQVVIIDGGTTTSELITFL 109
>gi|331657336|ref|ZP_08358298.1| regulatory protein, DeoR family [Escherichia coli TA206]
gi|331055584|gb|EGI27593.1| regulatory protein, DeoR family [Escherichia coli TA206]
Length = 149
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNATIITVSS 119
>gi|225570375|ref|ZP_03779400.1| hypothetical protein CLOHYLEM_06472 [Clostridium hylemonae DSM
15053]
gi|225160907|gb|EEG73526.1| hypothetical protein CLOHYLEM_06472 [Clostridium hylemonae DSM
15053]
Length = 249
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
K AR+A +++ G + +G G T L+ I + + V+ ++
Sbjct: 73 KEQIARKASEFISAGDIIFIGAGMTCNL----LSKYINDKENITVVTTN 117
>gi|86360128|ref|YP_472017.1| glycerol-3-phosphate transcriptional regulator protein [Rhizobium
etli CFN 42]
gi|86284230|gb|ABC93290.1| glycerol-3-phosphate transcriptional regulator protein, DeoR family
[Rhizobium etli CFN 42]
Length = 261
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 21/151 (13%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTEN 60
KR ARR + T+ +G GST + L D I N V ++ +
Sbjct: 80 AKRQIARRVAADIGPDATVFLGIGSTVQFVAEALRDHQGLRVITNNMHVALMLCESPSVE 139
Query: 61 FCKIHHIPLHSPEDV---SSVDL--------SIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+ H DV + ++ G ++ + L+ +
Sbjct: 140 VHLTGGLLRHDDRDVVGTDVIKFVEKFYATYAVVGAGALNPLIGLMDFSYAEAQITNALL 199
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIEIDQF 140
+ ++ D SK + + F
Sbjct: 200 ENSKTRLLAADVSK-----WTRHASVRVAPF 225
>gi|329298465|ref|ZP_08255801.1| DeoR family transcriptional regulator [Plautia stali symbiont]
Length = 217
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
KR A A+Q++ G TL + G+T L
Sbjct: 78 KRAIAAAAVQHLQPGQTLFLDAGTTTTLLAEEL 110
>gi|221209509|ref|ZP_03582490.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD1]
gi|221170197|gb|EEE02663.1| transcriptional regulator, DeoR family [Burkholderia multivorans
CGD1]
Length = 267
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 16/136 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL-ADKIAN-------------GFRVQ 50
K+ AR+A + G T + G+T+ + L AD A G
Sbjct: 91 DAKQRIARQAASMIAPGQTAIIDGGTTSAWLVKALPADLCATIVTHSPTVATALAGHPSV 150
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGALLREKII 108
+ I + + E +S + G + L G ++ +
Sbjct: 151 EVILIGGRLYKHSIVAVGAAAMEGISRIHADWYFMGVTGVHPTAGLSTGDFEEAAIKRAL 210
Query: 109 AHAASRFIVIGDESKR 124
A A+ +V+ SK
Sbjct: 211 AARAAETVVLASSSKL 226
>gi|37524831|ref|NP_928175.1| putative aga operon transcriptional repressor [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36784256|emb|CAE13127.1| Putative aga operon transcriptional repressor [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 257
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVI--------- 52
K A RA Q+V DG L + +GST + L ++ + N +
Sbjct: 81 KSRIAARAAQFVQDGDALILDSGSTTTQIAPFLKERRDLVVMTNALNIAYELAGFDRMEV 140
Query: 53 -----PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+N+ + ++ L +DGFD G A L ++
Sbjct: 141 MVLGGSVRQNSYSLYGPAAEQQLRQYRFDTLFLGVDGFD--LEAGITTPHPGEAHLN-RV 197
Query: 108 IAHAASRFIVIGDESKR 124
+ A I + D SK
Sbjct: 198 MCEVAHEIIAVADASKF 214
>gi|315301751|ref|ZP_07872810.1| transcriptional regulator [Listeria ivanovii FSL F6-596]
gi|313629880|gb|EFR97954.1| transcriptional regulator [Listeria ivanovii FSL F6-596]
Length = 193
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+ K A A + DG + + +GST + + DK ++ + ++ + N
Sbjct: 76 QTEQKEIIASLAASEINDGDVIYLDSGSTCTALLNKILDK-----KISIFTTNTSIFNIS 130
Query: 63 KIHHIPLHSP 72
+
Sbjct: 131 TEIRAEITIL 140
>gi|312792394|ref|YP_004025317.1| DeoR family transcriptional regulator [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179534|gb|ADQ39704.1| transcriptional regulator, DeoR family [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 266
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 42/145 (28%), Gaps = 17/145 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA----------------NGFRVQ 50
K + A ++ DG T+ + +G+T + + K + V
Sbjct: 95 KEYIGKLAASFIKDGDTIILDSGTTTQYIARNINAKNITIITNSVNIAYELSNNDNLEVI 154
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
V T+ + I VD + + + + ++ +
Sbjct: 155 VTGGVIRTKTKALVGDITQSILRQF-RVDKAFVAANGVSIEFGVTTPSHVEAAIKRAMIE 213
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A ++ D SK + P+
Sbjct: 214 NAKEVFLVADSSKFGQVTFSLICPV 238
>gi|312866201|ref|ZP_07726422.1| transcriptional regulator, DeoR family [Streptococcus downei F0415]
gi|311098605|gb|EFQ56828.1| transcriptional regulator, DeoR family [Streptococcus downei F0415]
Length = 254
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ KR A + + DG T+ +G G+T + L ++
Sbjct: 76 QVAEKRQIAAYTAKRIQDGETIFIGPGTTLEFLAQELVER 115
>gi|300172993|ref|YP_003772159.1| fructose operon transcriptional regulator [Leuconostoc
gasicomitatum LMG 18811]
gi|299887372|emb|CBL91340.1| Transcription regulator of fructose operon [Leuconostoc
gasicomitatum LMG 18811]
Length = 250
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A+RA+Q + G T+ + GST E + LADK
Sbjct: 79 KQKIAKRAVQQLQGGETIFLDAGSTTGEVIAYLADK 114
>gi|163915029|ref|NP_001106504.1| WD repeat domain 78 [Xenopus (Silurana) tropicalis]
gi|159155149|gb|AAI54708.1| LOC100127694 protein [Xenopus (Silurana) tropicalis]
Length = 795
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 172 FVSDGGNYIVDAFFGFIPDPQIISGELCNIPGV-IEHGLFINMVDCAIIGTSDGECLVLQ 230
V++ I D I DP I++ PGV + LF +C +IG SDG+ V +
Sbjct: 713 AVTENRVEIWDLGTSTI-DPLIVNEA-N--PGVKLTSILFAKNTNCVLIGDSDGQVNVYE 768
>gi|229016673|ref|ZP_04173609.1| Transcriptional regulator, DeoR [Bacillus cereus AH1273]
gi|229022887|ref|ZP_04179407.1| Transcriptional regulator, DeoR [Bacillus cereus AH1272]
gi|228738422|gb|EEL88898.1| Transcriptional regulator, DeoR [Bacillus cereus AH1272]
gi|228744623|gb|EEL94689.1| Transcriptional regulator, DeoR [Bacillus cereus AH1273]
Length = 260
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|229166261|ref|ZP_04294020.1| Transcriptional regulator, DeoR [Bacillus cereus AH621]
gi|228617206|gb|EEK74272.1| Transcriptional regulator, DeoR [Bacillus cereus AH621]
Length = 260
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|206968004|ref|ZP_03228960.1| transcriptional regulator, DeoR family [Bacillus cereus AH1134]
gi|206736924|gb|EDZ54071.1| transcriptional regulator, DeoR family [Bacillus cereus AH1134]
Length = 260
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|47566216|ref|ZP_00237244.1| transcriptional regulator, DeoR family [Bacillus cereus G9241]
gi|118476900|ref|YP_894051.1| DeoR family transcriptional regulator [Bacillus thuringiensis str.
Al Hakam]
gi|225863290|ref|YP_002748668.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB102]
gi|228984502|ref|ZP_04144679.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229154994|ref|ZP_04283108.1| Transcriptional regulator, DeoR [Bacillus cereus ATCC 4342]
gi|47556769|gb|EAL15100.1| transcriptional regulator, DeoR family [Bacillus cereus G9241]
gi|118416125|gb|ABK84544.1| transcriptional regulator, DeoR family [Bacillus thuringiensis str.
Al Hakam]
gi|225785939|gb|ACO26156.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB102]
gi|228628552|gb|EEK85265.1| Transcriptional regulator, DeoR [Bacillus cereus ATCC 4342]
gi|228775205|gb|EEM23594.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 260
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|291521944|emb|CBK80237.1| Transcriptional regulators of sugar metabolism [Coprococcus catus
GD/7]
Length = 253
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 17/135 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K+ A++A++ + + M +GST E + D+ +N + + N K
Sbjct: 80 QAKQEIAKKALKLIQPDTAIFMDSGSTTTELAKIFPDQ-SNLIYTTGLSCATELANLTKP 138
Query: 65 HHIPLHSPEDVSSVDLS----------------IDGFDEIDSRLRLIKGYGGALLREKII 108
+ + S+ + G + G + ++
Sbjct: 139 VIMLPGGQLNRYSISVYGISAIRELEQVNFHQTFLGVTGYSMKAGFTCGNNEEAMLKRTA 198
Query: 109 AHAASRFIVIGDESK 123
A + +V+ D SK
Sbjct: 199 IEQAEQVVVLMDASK 213
>gi|255522329|ref|ZP_05389566.1| transcription repressor of myo-inositol catabolism operon IolR
[Listeria monocytogenes FSL J1-175]
Length = 116
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|260881337|ref|ZP_05404152.2| lactose phosphotransferase system repressor [Mitsuokella multacida
DSM 20544]
gi|260849136|gb|EEX69143.1| lactose phosphotransferase system repressor [Mitsuokella multacida
DSM 20544]
Length = 266
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ K ARRA V + + GST + L ++ A
Sbjct: 97 EEKIAIARRAASLVTRKDFVYIDAGSTTLHMVDFLQERQA 136
>gi|182416699|ref|ZP_02948099.1| lactose phosphotransferase system repressor [Clostridium butyricum
5521]
gi|237667227|ref|ZP_04527211.1| lactose phosphotransferase system repressor [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182379424|gb|EDT76918.1| lactose phosphotransferase system repressor [Clostridium butyricum
5521]
gi|237655575|gb|EEP53131.1| lactose phosphotransferase system repressor [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 247
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 5/35 (14%), Positives = 15/35 (42%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K A+ A + + + + G+T + + +
Sbjct: 79 EEKHQLAKYAASLIENDDVIYLDAGTTTEAMIDYI 113
>gi|30019480|ref|NP_831111.1| DeoR family transcriptional regulator [Bacillus cereus ATCC 14579]
gi|218231009|ref|YP_002366110.1| transcriptional regulator, DeoR family [Bacillus cereus B4264]
gi|228920139|ref|ZP_04083488.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229126742|ref|ZP_04255754.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-Cer4]
gi|229149628|ref|ZP_04277859.1| Transcriptional regulator, DeoR [Bacillus cereus m1550]
gi|29895024|gb|AAP08312.1| Transcriptional regulator, DeoR family [Bacillus cereus ATCC 14579]
gi|218158966|gb|ACK58958.1| transcriptional regulator, DeoR family [Bacillus cereus B4264]
gi|228633838|gb|EEK90436.1| Transcriptional regulator, DeoR [Bacillus cereus m1550]
gi|228656682|gb|EEL12508.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-Cer4]
gi|228839595|gb|EEM84887.1| Transcriptional regulator, DeoR [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 260
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|309808923|ref|ZP_07702800.1| transcriptional regulator, DeoR family [Lactobacillus iners
LactinV 01V1-a]
gi|309810119|ref|ZP_07703965.1| transcriptional regulator, DeoR family [Lactobacillus iners SPIN
2503V10-D]
gi|308167819|gb|EFO69960.1| transcriptional regulator, DeoR family [Lactobacillus iners
LactinV 01V1-a]
gi|308169618|gb|EFO71665.1| transcriptional regulator, DeoR family [Lactobacillus iners SPIN
2503V10-D]
Length = 170
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 12 RRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
++A + + DG T+ +G G+T + + L K
Sbjct: 3 KKAAKLIKDGETVYVGPGTTLEFMVAELKQK 33
>gi|222102616|ref|YP_002539655.1| transcriptional regulator DeoR family [Agrobacterium vitis S4]
gi|221739217|gb|ACM39950.1| transcriptional regulator DeoR family [Agrobacterium vitis S4]
Length = 253
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
K A V +GM + + TG+T + L + V ++ +S
Sbjct: 79 KARIGEAAASMVENGMKIFIDTGTTTLACLKHL----ESRKDVTIVSNSIA 125
>gi|329947007|ref|ZP_08294419.1| transcriptional regulator, DeoR family [Actinomyces sp. oral taxon
170 str. F0386]
gi|328526818|gb|EGF53831.1| transcriptional regulator, DeoR family [Actinomyces sp. oral taxon
170 str. F0386]
Length = 244
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 30/154 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL----------------------LADKIA 44
K A+ A V G ++G+ G+T E +A ++
Sbjct: 64 KTRIAKAAAAMVHPGDSIGLNGGTTTTEVAREIVLLPELTDPDVPVTLVTNAVNIASEMT 123
Query: 45 NGFRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGG 100
V+V+ + + + + ++ L ++G DE + G
Sbjct: 124 VRQCVRVVVTGGIARARSFELTGPLAELILPSISMGTLFLGVEGLDE----RGAYAQHDG 179
Query: 101 ALLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ AA R +V+ D SK + P
Sbjct: 180 EAAVNAALVEAAQRVVVVCDSSKLGTTAFTLICP 213
>gi|163939234|ref|YP_001644118.1| DeoR family transcriptional regulator [Bacillus weihenstephanensis
KBAB4]
gi|229010723|ref|ZP_04167920.1| Transcriptional regulator, DeoR [Bacillus mycoides DSM 2048]
gi|229132222|ref|ZP_04261079.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-ST196]
gi|163861431|gb|ABY42490.1| transcriptional regulator, DeoR family [Bacillus weihenstephanensis
KBAB4]
gi|228651270|gb|EEL07248.1| Transcriptional regulator, DeoR [Bacillus cereus BDRD-ST196]
gi|228750397|gb|EEM00226.1| Transcriptional regulator, DeoR [Bacillus mycoides DSM 2048]
Length = 260
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M ++ K+ +A +V DG + + GST + + L + + T+
Sbjct: 75 MLHIEEKKRIGYKAATFVEDGDVIAIDDGSTPLQMVPYLVHR--KNLTIVTSSFPVATQ 131
>gi|269140630|ref|YP_003297331.1| putative DEOR-type transcriptional regulator [Edwardsiella tarda
EIB202]
gi|267986291|gb|ACY86120.1| putative DEOR-type transcriptional regulator [Edwardsiella tarda
EIB202]
gi|304560416|gb|ADM43080.1| Putative DeoR-type transcriptional regulator [Edwardsiella tarda
FL6-60]
Length = 251
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR A + V G ++ + GSTA L + + ++ +
Sbjct: 80 KVRIARAASRLVQPGESVVINCGSTAFLLGRELCGRDVQVITNYLPLANYLIDQEHDSVV 139
Query: 67 IPLHSPEDVSSVDLSIDGFDE--IDSRLRLIKGYG------------GALLREKIIAHAA 112
I ++ L+ D G G A+ +K++ + A
Sbjct: 140 IMGGQYNRTQAITLAPADGDASLYAGHWMFTSGKGLTPEGLYKTDMLTAMAEQKMLKY-A 198
Query: 113 SRFIVIGDESKR 124
+ + + D SK
Sbjct: 199 GKLVALVDSSKV 210
>gi|157370931|ref|YP_001478920.1| DeoR family transcriptional regulator [Serratia proteamaculans 568]
gi|157322695|gb|ABV41792.1| transcriptional regulator, DeoR family [Serratia proteamaculans
568]
Length = 254
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 16/138 (11%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA-----DKIANGFRVQVIPSSRN 57
A K+ A +A + + G +L + G+T EF +A I N + +
Sbjct: 77 AEDDKKAIAVKAAELIKPGDSLFIDFGTTTLEFAKQIAGINQLTVITNSPVIANLFHENT 136
Query: 58 TENFCKIHHIPLHSPEDVSSV-----------DLSIDGFDEIDSRLRLIKGYGGALLREK 106
T + I S + D ++ G + + ++ +
Sbjct: 137 TIDLILIGGQFGLSKMECIGPVALQGISAFYADYAVIGAGAVSPKAGVMDQDLNEAAIAR 196
Query: 107 IIAHAASRFIVIGDESKR 124
+ +++ IV+ D K
Sbjct: 197 QMIKNSNKTIVLADGHKL 214
>gi|325104570|ref|YP_004274224.1| transcriptional regulator, DeoR family [Pedobacter saltans DSM
12145]
gi|324973418|gb|ADY52402.1| transcriptional regulator, DeoR family [Pedobacter saltans DSM
12145]
Length = 247
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCKIH 65
K+ AR+A++ + + M L + G+T MI LA + + + + S +
Sbjct: 76 KKEIARKALRLIKNDMILLVSGGTT----MIELARMLPDTLKCTIFTISPLVALELAEKP 131
Query: 66 HIPLHSPE-------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
I + VDL I G + I L + +K
Sbjct: 132 SINVILLGGQLSKSAHINTGSLTISQLSDIKVDLCIQGANSISIEDGLTDSDWEVVQIKK 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ +A + ++I K
Sbjct: 192 AMLKSAVKTVIICIAEKL 209
>gi|258621769|ref|ZP_05716800.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM573]
gi|262171897|ref|ZP_06039575.1| transcriptional repressor of aga operon [Vibrio mimicus MB-451]
gi|258586000|gb|EEW10718.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM573]
gi|261892973|gb|EEY38959.1| transcriptional repressor of aga operon [Vibrio mimicus MB-451]
Length = 256
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGST----AKEFMIL-----------LADKIANG 46
+ +K A V DG TL + +GST A +A +AN
Sbjct: 75 NQD-IKSQLGAYAASLVDDGDTLILDSGSTTEQIAFHLTDKKQLKVMTNAINIAYHLANR 133
Query: 47 FRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++VI + +N+ + L + + L +DGFD++ G A
Sbjct: 134 DNIEVIVTGGLMRKNSYSLHGDSGEALLGQFRFNKLFLGVDGFDKLTG--ITTPHSGEAN 191
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ K++ AA I + D SK
Sbjct: 192 INRKMVE-AAQMVIAVTDSSKF 212
>gi|168334123|ref|ZP_02692336.1| transcriptional regulator, DeoR family protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 229
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 52/141 (36%), Gaps = 23/141 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGST----AKEF------------MILLADKIANGFRV 49
+K+ A RA + + +G T+ +G+G T AK + L + + G +
Sbjct: 47 LKKI-ALRACEEIEEGDTIFLGSGRTCCELAKLLYKFNSISVVTNNIGCLDNLLRAGAEI 105
Query: 50 -----QVIPSSRNTENFC-KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
+V + T K +H + + VD + ++ + L +L
Sbjct: 106 YLLGGKVTSTDGLTLFSSPKNNHQNSANFLENIRVDKAFTSASAVNLKQGLAVSSVISLP 165
Query: 104 REKIIAHAASRFIVIGDESKR 124
++ + ++ ++ D K
Sbjct: 166 VYDYVSRMSQKWYLMIDSDKF 186
>gi|148270796|ref|YP_001245256.1| DeoR family transcriptional regulator [Thermotoga petrophila RKU-1]
gi|147736340|gb|ABQ47680.1| transcriptional regulator, DeoR family [Thermotoga petrophila
RKU-1]
Length = 266
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQ 50
+ K A+ A+ +V DG + + +TA F LA + +
Sbjct: 90 EAKEKIAQLALNFVEDGDIIFLDASTTAHIFAKHLASSQKSVHVIT 135
>gi|311277895|ref|YP_003940126.1| transcriptional regulator, DeoR family [Enterobacter cloacae SCF1]
gi|308747090|gb|ADO46842.1| transcriptional regulator, DeoR family [Enterobacter cloacae SCF1]
Length = 256
Score = 36.4 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTA 32
K A +A +V DG TL + +GST
Sbjct: 80 KSQIAEKAASFVKDGDTLILDSGSTT 105
>gi|290892462|ref|ZP_06555456.1| transcriptional regulator [Listeria monocytogenes FSL J2-071]
gi|290558028|gb|EFD91548.1| transcriptional regulator [Listeria monocytogenes FSL J2-071]
Length = 253
Score = 36.0 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 15/33 (45%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T + L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAVAL 111
>gi|255533388|ref|YP_003093760.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
gi|255346372|gb|ACU05698.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
Length = 254
Score = 36.0 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 42/139 (30%), Gaps = 22/139 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A+ A+ + ++ +G+G+T E L + + P+ +
Sbjct: 78 EEKQKIAKAALSIIGQNDSISIGSGTTVFELARCL---YPSKHLTVITPALKVGLELSNR 134
Query: 65 HHIPLHSPEDVSSVD-------------------LSIDGFDEIDSRLRLIKGYGGALLRE 105
++ + + + + G D ID
Sbjct: 135 PNVEVLQLGGLIRPNSSSVAGAHAEKILAEISCGVLFLGVDGIDLDFGFSITNIAEATLN 194
Query: 106 KIIAHAASRFIVIGDESKR 124
+ + A +++ D +K
Sbjct: 195 QKMIETAQTLVIMADSTKF 213
>gi|293401838|ref|ZP_06645979.1| transcriptional regulator, DeoR family [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304790|gb|EFE46038.1| transcriptional regulator, DeoR family [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 254
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 1 MDALQM----KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
M+ + K + A + V +G + + +G+T + L DK
Sbjct: 74 MNKENIHLAEKELIGKAAAEIVKNGECIYLDSGTTPVAMLPYLKDK 119
>gi|284800669|ref|YP_003412534.1| hypothetical protein LM5578_0416 [Listeria monocytogenes 08-5578]
gi|284993855|ref|YP_003415623.1| hypothetical protein LM5923_0415 [Listeria monocytogenes 08-5923]
gi|284056231|gb|ADB67172.1| hypothetical protein LM5578_0416 [Listeria monocytogenes 08-5578]
gi|284059322|gb|ADB70261.1| hypothetical protein LM5923_0415 [Listeria monocytogenes 08-5923]
Length = 253
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 15/33 (45%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T + L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAVAL 111
>gi|257865961|ref|ZP_05645614.1| regulatory protein [Enterococcus casseliflavus EC30]
gi|257872294|ref|ZP_05651947.1| regulatory protein [Enterococcus casseliflavus EC10]
gi|257875588|ref|ZP_05655241.1| regulatory protein [Enterococcus casseliflavus EC20]
gi|257799895|gb|EEV28947.1| regulatory protein [Enterococcus casseliflavus EC30]
gi|257806458|gb|EEV35280.1| regulatory protein [Enterococcus casseliflavus EC10]
gi|257809754|gb|EEV38574.1| regulatory protein [Enterococcus casseliflavus EC20]
Length = 251
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT 58
K+ AR A Q + +G + + G+T E + L+ G +V +
Sbjct: 79 KQKIARAAAQTIKNGEVIYLDAGTTTLEMIPFLSA--ITGLKVVTNSVKHAS 128
>gi|238921504|ref|YP_002935019.1| transcriptional repressor UlaR [Edwardsiella ictaluri 93-146]
gi|238871073|gb|ACR70784.1| HTH-type transcriptional regulator UlaR [Edwardsiella ictaluri
93-146]
Length = 251
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K AR A + V G ++ + GSTA L + + ++ +
Sbjct: 80 KVRIARAASRLVQPGESVVINCGSTAFLLGRELCGRDVQVITNYLPLANYLIDQEHDSVV 139
Query: 67 IPLHSPEDVSSVDLSIDGFDE--IDSRLRLIKGYG------------GALLREKIIAHAA 112
I ++ L+ D G G A+ +K++ + A
Sbjct: 140 IMGGQYNRTQAITLAPADGDASLYAGHWMFTSGKGLTPEGLYKTDMLTAMAEQKMLRY-A 198
Query: 113 SRFIVIGDESKR 124
+ + + D SK
Sbjct: 199 GKLVALVDSSKV 210
>gi|227890443|ref|ZP_04008248.1| DeoR family transcriptional regulator [Lactobacillus johnsonii ATCC
33200]
gi|227849012|gb|EEJ59098.1| DeoR family transcriptional regulator [Lactobacillus johnsonii ATCC
33200]
Length = 254
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ AA A + V D T+ +G G+T + + L K
Sbjct: 80 KQAAAEVASKIVQDDETIYVGPGTTLEFMVAKLNQK 115
>gi|212710318|ref|ZP_03318446.1| hypothetical protein PROVALCAL_01377 [Providencia alcalifaciens DSM
30120]
gi|212687125|gb|EEB46653.1| hypothetical protein PROVALCAL_01377 [Providencia alcalifaciens DSM
30120]
Length = 255
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 14/99 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q KR + A V DG + + G+T E +L ++ F + ++ + + +
Sbjct: 77 QTKREIGQFASSLVEDGQVVYLDAGTTTFEIARVLGER----FNLTIVTNDFSIMQYLMN 132
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALL 103
S ++L G + A+L
Sbjct: 133 K----------SQLNLYHTGGQVDKRNHSCVGNTAAAML 161
>gi|325970462|ref|YP_004246653.1| DeoR family transcriptional regulator [Spirochaeta sp. Buddy]
gi|324025700|gb|ADY12459.1| transcriptional regulator, DeoR family [Spirochaeta sp. Buddy]
Length = 259
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K + + Q + +G TL + +GST E + +A +V ++ ++ + CK
Sbjct: 81 KESIGQAVAQMIEEGDTLYINSGSTTFEVIRSVAALQK---KVTIVTNNIDAIWLCKE 135
>gi|323358500|ref|YP_004224896.1| transcriptional regulator of sugar metabolism [Microbacterium
testaceum StLB037]
gi|323274871|dbj|BAJ75016.1| transcriptional regulator of sugar metabolism [Microbacterium
testaceum StLB037]
Length = 266
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K ARRA V GM++G+ GS+ LA ++ + ++
Sbjct: 80 KTAIARRAATLVEPGMSVGLSGGSSTW----ALARELRGVADLTIVT 122
>gi|23097953|ref|NP_691419.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
gi|22776177|dbj|BAC12454.1| transcriptional regulator (DeoR family) [Oceanobacillus iheyensis
HTE831]
Length = 257
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 54/152 (35%), Gaps = 16/152 (10%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANG 46
M+ + K+ A AI++V +G + + +TA L A +++N
Sbjct: 75 MNVRE-KQKIAMEAIKHVFEGDKIILDASTTAWYMAKALPDLPLTVMTNSIKVAMELSNK 133
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVS-SVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
++ VI + + + PL S +D + + + + +
Sbjct: 134 HQINVISTGGTLLSKSLSYAGPLAEASFHSYHLDKAFISCKGLHLERGISESDEQQSRIK 193
Query: 106 KIIAHAASRFIVIGDESKRVDFLGRGMLPIEI 137
K + +A ++ D SK + IE+
Sbjct: 194 KKMIESADSTYLMIDYSKFGKTAFSKIDQIEV 225
>gi|196230379|ref|ZP_03129241.1| transcriptional regulator, DeoR family [Chthoniobacter flavus
Ellin428]
gi|196225309|gb|EDY19817.1| transcriptional regulator, DeoR family [Chthoniobacter flavus
Ellin428]
Length = 255
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
++ KR AR A V G T+ M G+T E LA
Sbjct: 77 QMEEKRRVARCAAALVSPGDTIIMDAGTTVVEMAPFLA 114
>gi|156973151|ref|YP_001444058.1| transcriptional regulator [Vibrio harveyi ATCC BAA-1116]
gi|156524745|gb|ABU69831.1| hypothetical protein VIBHAR_00830 [Vibrio harveyi ATCC BAA-1116]
Length = 253
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + + + + +GST + L DK +AN ++ P+
Sbjct: 79 KLSLAKAAASLIREHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESEKV 212
>gi|255534013|ref|YP_003094385.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
gi|255346997|gb|ACU06323.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
Length = 248
Score = 36.0 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 24/142 (16%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENF 61
A K A++ I + DGM + G G++ +I L ++ S
Sbjct: 72 AKDAKILIAKKTIPLIKDGMVILTGGGTS----IIELVKQLPENLNATFFTISPFVAIEL 127
Query: 62 CK-----------------IHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGAL 102
K H +S ++ L + G I L
Sbjct: 128 AKYPRVEVILIGGLFSKNSQITYGGHVINQLSEINADLCLLGTSAIHPLDGLTDTDWEIN 187
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+K + ++ R ++ K
Sbjct: 188 QLKKAMFSSSKRAAILCISEKL 209
>gi|47096572|ref|ZP_00234161.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
1/2a F6854]
gi|254900671|ref|ZP_05260595.1| transcription repressor of myo-inositol catabolism operon IolR
[Listeria monocytogenes J0161]
gi|254913628|ref|ZP_05263640.1| transcriptional regulator [Listeria monocytogenes J2818]
gi|254938041|ref|ZP_05269738.1| transcriptional regulator [Listeria monocytogenes F6900]
gi|47015032|gb|EAL05976.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
1/2a F6854]
gi|258610654|gb|EEW23262.1| transcriptional regulator [Listeria monocytogenes F6900]
gi|293591640|gb|EFF99974.1| transcriptional regulator [Listeria monocytogenes J2818]
Length = 253
Score = 36.0 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 15/33 (45%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T + L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAVAL 111
>gi|329668127|gb|AEB94075.1| Lactose phosphotransferase system repressor [Lactobacillus
johnsonii DPC 6026]
Length = 253
Score = 36.0 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+K+ ++ + DG T+ +G G+T + L+ K
Sbjct: 83 DLKKQIGQKLANLIEDGSTVFIGAGTTLLYSVPFLSKK 120
>gi|312198041|ref|YP_004018102.1| DeoR family transcriptional regulator [Frankia sp. EuI1c]
gi|311229377|gb|ADP82232.1| transcriptional regulator, DeoR family [Frankia sp. EuI1c]
Length = 249
Score = 36.0 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ A A + G T + G+TA + L
Sbjct: 77 KQRVAVAAAALIEPGSTAILDGGTTALAVVRAL 109
>gi|224367617|ref|YP_002601780.1| putative 4-hydroxybutyrate CoA-transferase [Desulfobacterium
autotrophicum HRM2]
gi|223690333|gb|ACN13616.1| putative 4-hydroxybutyrate CoA-transferase [Desulfobacterium
autotrophicum HRM2]
Length = 620
Score = 36.0 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1 MDAL-QMKRNAARRAIQYVVDGMTLGMGTG 29
M + KR + RA+ + GM + +GTG
Sbjct: 1 MSQPWEKKRVSPERALSKIEPGMNVFLGTG 30
>gi|257878674|ref|ZP_05658327.1| regulatory protein DeoR [Enterococcus faecium 1,230,933]
gi|257812902|gb|EEV41660.1| regulatory protein DeoR [Enterococcus faecium 1,230,933]
Length = 192
Score = 36.0 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+Q K+ A A + +G T+ +G G+T + LLA + N ++++I ++ +
Sbjct: 7 QIQEKKEIAATAASLIHEGETIFLGPGTT----IELLATHLLNK-KIRIITNNYPVFDIL 61
Query: 63 KIHHIPLHSP 72
P
Sbjct: 62 AQADGPEILL 71
>gi|269122606|ref|YP_003310783.1| DeoR family transcriptional regulator [Sebaldella termitidis ATCC
33386]
gi|268616484|gb|ACZ10852.1| transcriptional regulator, DeoR family [Sebaldella termitidis ATCC
33386]
Length = 255
Score = 36.0 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 39/136 (28%), Gaps = 17/136 (12%)
Query: 17 YVVDGMTLGMGTGSTAKEFMILLADKIAN----------------GFRVQVIPSSRNTEN 60
Y+ DG + + +G+T + L +K + + + +
Sbjct: 86 YINDGDIIFIDSGTTTMWLIDFLKNKSITILTNNLSAIVSALPYPNLNIISLGGTLKRKT 145
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIVIGD 120
+ + +D + + + I +K+I + +I D
Sbjct: 146 NSFVGNSTSLVLKDYN-ISKAFMAATGISIARGATNSSVEEYELKKLIVEKSDEIFLIVD 204
Query: 121 ESKRVDFLGRGMLPIE 136
SK P+E
Sbjct: 205 SSKFDSISLMTYSPLE 220
>gi|199597928|ref|ZP_03211353.1| transcriptional regulator, DeoR family protein [Lactobacillus
rhamnosus HN001]
gi|258507255|ref|YP_003170006.1| DeoR family transcriptional regulator [Lactobacillus rhamnosus GG]
gi|199591185|gb|EDY99266.1| transcriptional regulator, DeoR family protein [Lactobacillus
rhamnosus HN001]
gi|257147182|emb|CAR86155.1| Transcriptional regulator, DeoR family [Lactobacillus rhamnosus GG]
gi|259648621|dbj|BAI40783.1| putative transcriptional regulator [Lactobacillus rhamnosus GG]
Length = 264
Score = 36.0 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL------------------ADKIAN-GF 47
KR R A Q + + + +G+T E L A +AN
Sbjct: 82 KRQIGRAAAQLIEPEDLIFIDSGTTTAEMGEFLPTDFPFTLVTNNLQIINQAAPLANIKL 141
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ + R T++F I ++ + S + + + I L L +
Sbjct: 142 VIIGMNFDRRTQSFTGIDNMNIFSRFN---IGKAFMAATGISLTRGLSNSEYNEYLIKSE 198
Query: 108 IAHAASRFIVIGDESKR 124
I A R I++ D+SK
Sbjct: 199 IFKKAHRKILLIDQSKF 215
>gi|254469202|ref|ZP_05082607.1| transcriptional regulator [Pseudovibrio sp. JE062]
gi|211961037|gb|EEA96232.1| transcriptional regulator [Pseudovibrio sp. JE062]
Length = 257
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 32/135 (23%), Gaps = 16/135 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
KR A + D +L + GST L D + + +
Sbjct: 81 AKRKIAAAVANMIEDESSLFLDVGSTTAFIADALKDHKRLMVVTNSVAVAYKLATRNENR 140
Query: 66 HI----------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
S + D +I I ++ + +
Sbjct: 141 VFMAGGELRAHDGGAFGATAASFFENFQTDYAILSAAAISPSKGIMLFDLEEAQISRTVM 200
Query: 110 HAASRFIVIGDESKR 124
A+ IV D K
Sbjct: 201 QHANCKIVAADSRKF 215
>gi|254384397|ref|ZP_04999739.1| transcriptional regulatory protein [Streptomyces sp. Mg1]
gi|194343284|gb|EDX24250.1| transcriptional regulatory protein [Streptomyces sp. Mg1]
Length = 268
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 12/34 (35%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A V G + + GST+ L
Sbjct: 84 AKSAVAEAASALVKPGSVVAVSGGSTSYAVAARL 117
>gi|322833300|ref|YP_004213327.1| DeoR family transcriptional regulator [Rahnella sp. Y9602]
gi|321168501|gb|ADW74200.1| transcriptional regulator, DeoR family [Rahnella sp. Y9602]
Length = 247
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M K+ A+ A + DG T+ +GS+ LAD V +
Sbjct: 67 MSNFAQKQKLAKFAASLIQDGETVFFESGSSIALLAQYLAD--KKNLTVITVS 117
>gi|312142425|ref|YP_003993871.1| transcriptional regulator, DeoR family [Halanaerobium sp.
'sapolanicus']
gi|311903076|gb|ADQ13517.1| transcriptional regulator, DeoR family [Halanaerobium sp.
'sapolanicus']
Length = 253
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K ++A + + DG T+ + G+T + + L + ++ ++ + K
Sbjct: 79 KAAIGKKAAEIIKDGDTIYIDAGTTTRNIIDHL----KGKNNLTIVSNAHHIIKRVKDSE 134
Query: 67 IPL 69
I
Sbjct: 135 IDC 137
>gi|218283917|ref|ZP_03489785.1| hypothetical protein EUBIFOR_02381 [Eubacterium biforme DSM 3989]
gi|218215496|gb|EEC89034.1| hypothetical protein EUBIFOR_02381 [Eubacterium biforme DSM 3989]
Length = 252
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 18/140 (12%)
Query: 2 DAL--QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIA 44
+ + K+ ++A ++ +GM + + GST + L A K A
Sbjct: 73 NQEYIEEKKQIMKKACTFIKEGMVVYLDAGSTCLAGIPFLQSIHNITIVTNSIFVAYKCA 132
Query: 45 NGFRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
++ + N + + D +D++I G L
Sbjct: 133 KLNMHVILIGGNISNNAYRSYGNFASETIDYIHIDVAILGTKGFKDNNGFTTYENEYEL- 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
++ I + + IV+ D++K
Sbjct: 192 KRHILQQSEKIIVVTDKNKF 211
>gi|94971660|ref|YP_593708.1| helicase c2 [Candidatus Koribacter versatilis Ellin345]
gi|94553710|gb|ABF43634.1| Helicase c2 [Candidatus Koribacter versatilis Ellin345]
Length = 674
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 16/117 (13%)
Query: 3 ALQMKRNAARRAIQYVVDGMTL--GMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
LQM + +A+ + + G GTG T + I +G RV + ++N +
Sbjct: 43 QLQMAQAV-EQALTE-KRHLIVEAGTGTGKTLAYLV----PVIRSGLRVIISTGTKNLQE 96
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRFIV 117
+DV ++ +I G + L K + + R ++
Sbjct: 97 QLF--------YKDVPFLERAIFGAESDQKLKVCYMKGRNNYLCRKKLYDLSDRPVL 145
>gi|88855799|ref|ZP_01130462.1| glucosamine-6-phosphate deaminase [marine actinobacterium
PHSC20C1]
gi|88815123|gb|EAR24982.1| glucosamine-6-phosphate deaminase [marine actinobacterium
PHSC20C1]
Length = 257
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 6/33 (18%)
Query: 5 QMKRNAARRAIQYVV------DGMTLGMGTGST 31
+ K+ A A + LG+ TGST
Sbjct: 8 ESKQAAGEVAADLIEALIRRTPDAVLGLATGST 40
>gi|325478850|gb|EGC81960.1| transcriptional regulator, DeoR family [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 264
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQV-IPSSRNTENFCKIH 65
K RRA + DG + + TG+T L+ I+N + SS N N
Sbjct: 88 KDLIGRRASSLINDGDIVIIDTGTTT----DKLSKYISNDISSTCLVFSSNNFLNLMYKD 143
Query: 66 HIPLH-------------------SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+I L + + + + + L + L +K
Sbjct: 144 NIDLILAGGFFHRNTGMFESQASLNVIENTRANKVFLSAAGVHKNLGITCSNSYELATKK 203
Query: 107 IIAHAASRFIVIGDESKR 124
+I + I++ D SK
Sbjct: 204 LIIKNSLEVILLVDSSKF 221
>gi|325003234|ref|ZP_08124346.1| DeoR family transcriptional regulator [Pseudonocardia sp. P1]
Length = 262
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS 54
KR AR A V G T+ + GST LA ++ + V+ +
Sbjct: 80 AKRAIARSAAALVRPGETVLLDAGSTVG----ALAHELRAVPGITVVTT 124
>gi|302387940|ref|YP_003823762.1| transcriptional regulator, DeoR family [Clostridium saccharolyticum
WM1]
gi|302198568|gb|ADL06139.1| transcriptional regulator, DeoR family [Clostridium saccharolyticum
WM1]
Length = 255
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K A ++++++ +G T+ + G+T +A +I + + VI + K
Sbjct: 75 KERIAEKSVEFIREGTTVYLDAGTTTY----EIAKRIMDMENMTVITNDLEIALLMKN 128
>gi|229550846|ref|ZP_04439571.1| DeoR family transcriptional regulator [Lactobacillus rhamnosus
LMS2-1]
gi|258538442|ref|YP_003172941.1| transcriptional regulator DeoR family [Lactobacillus rhamnosus Lc
705]
gi|229315796|gb|EEN81769.1| DeoR family transcriptional regulator [Lactobacillus rhamnosus
LMS2-1]
gi|257150118|emb|CAR89090.1| Transcriptional regulator, DeoR family [Lactobacillus rhamnosus Lc
705]
Length = 264
Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL------------------ADKIAN-GF 47
KR R A Q + + + +G+T E L A +AN
Sbjct: 82 KRQIGRAAAQLIEPEDLIFIDSGTTTAEMGEFLPTDFPFTLVTNNLQIINQAAPLANIKL 141
Query: 48 RVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+ + R T++F I ++ + S + + + I L L +
Sbjct: 142 VIIGMNFDRRTQSFTGIDNMNIFSRFN---IGKAFMAATGISLTRGLSNSEYNEYLIKSE 198
Query: 108 IAHAASRFIVIGDESKR 124
I A R I++ D+SK
Sbjct: 199 IFKKAHRKILLIDQSKF 215
>gi|296111833|ref|YP_003622215.1| fructose repressor [Leuconostoc kimchii IMSNU 11154]
gi|295833365|gb|ADG41246.1| fructose repressor [Leuconostoc kimchii IMSNU 11154]
Length = 235
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
KR A+RA+Q +V G + + GST E + LADK
Sbjct: 60 KRKIAQRAVQQLVGGEIIFLDAGSTTGEMIAYLADK 95
>gi|254489098|ref|ZP_05102302.1| transcriptional regulator, DeoR family [Roseobacter sp. GAI101]
gi|214042106|gb|EEB82745.1| transcriptional regulator, DeoR family [Roseobacter sp. GAI101]
Length = 280
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
KR A Q V DGM+L + GST L D+
Sbjct: 97 KRAIATTVAQQVRDGMSLFLDVGSTTAFVAEKLRDRCR 134
>gi|196232997|ref|ZP_03131846.1| glucosamine-6-phosphate isomerase [Chthoniobacter flavus
Ellin428]
gi|196222975|gb|EDY17496.1| glucosamine-6-phosphate isomerase [Chthoniobacter flavus
Ellin428]
Length = 260
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Query: 2 DALQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPS 54
+A + AAR + V LG+ TGST L G + +
Sbjct: 8 NADEASMIAARHVARLVRDKPNAVLGLATGSTPLMMYRELVRMHKEQGLDFSEVTT 63
>gi|153834217|ref|ZP_01986884.1| glucitol operon repressor [Vibrio harveyi HY01]
gi|148869405|gb|EDL68411.1| glucitol operon repressor [Vibrio harveyi HY01]
Length = 253
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + + + + +GST + L DK +AN ++ P+
Sbjct: 79 KLSLAKAAASLIREHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESEKV 212
>gi|223932982|ref|ZP_03624976.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
gi|223898299|gb|EEF64666.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
Length = 253
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A++A + DG T+ +G G+T + + L +
Sbjct: 77 QTKEKKLIAQKANSIIKDGETVFIGPGTTLEHLAVELKTR 116
>gi|325262914|ref|ZP_08129650.1| transcriptional regulator, DeoR family [Clostridium sp. D5]
gi|324032008|gb|EGB93287.1| transcriptional regulator, DeoR family [Clostridium sp. D5]
Length = 268
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 16/134 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------------IANGFRVQ 50
K+ + A Y+ DG T+ + +G+T+ + + LADK I +
Sbjct: 88 KKAIGKFAASYIEDGDTIFLDSGTTSLQVGLNLADKKNLTIITYDLFIATSVILDDSSTL 147
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
++ +F + + V+ D +D + + +K
Sbjct: 148 IVTGGIRRNDFGVLTGPMVQDFLRDIRVNKVFLTADSVDINFGISNAGFHEIDAKKQSIR 207
Query: 111 AASRFIVIGDESKR 124
A +I D SK
Sbjct: 208 AGRYIYLIVDHSKF 221
>gi|317497109|ref|ZP_07955436.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895654|gb|EFV17809.1| deoR family Bacterial regulatory protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 257
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K +A++++ + + +GST LLA +
Sbjct: 81 KTKLCEKALEFIPQTGVIYLDSGSTIVHMAQLLAQR 116
>gi|297160420|gb|ADI10132.1| DeoR-family protein transcriptional regulator [Streptomyces
bingchenggensis BCW-1]
Length = 243
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
MK+ A A V D + + G+T L+A ++ + S +
Sbjct: 69 MKQRIAEHAAALVQDDSVVVLDIGTTT----PLIARRLRGRPVTVITSSLAVLDELRDDD 124
Query: 66 HIPLHSP 72
+ L
Sbjct: 125 AVRLVLL 131
>gi|253755133|ref|YP_003028273.1| lactose phosphotransferase system repressor 2 [Streptococcus suis
BM407]
gi|251817597|emb|CAZ55344.1| lactose phosphotransferase system repressor 2 [Streptococcus suis
BM407]
Length = 253
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A++A + DG T+ +G G+T + + L +
Sbjct: 77 QTKEKKLIAQKANSIIKDGETVFIGPGTTLEHLAVELKTR 116
>gi|332522797|ref|ZP_08399049.1| transcriptional regulator, DeoR family [Streptococcus porcinus str.
Jelinkova 176]
gi|332314061|gb|EGJ27046.1| transcriptional regulator, DeoR family [Streptococcus porcinus str.
Jelinkova 176]
Length = 253
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ A++A + DG T+ +G G+T + + L +
Sbjct: 77 QTKEKKLIAQKANSIIKDGETVFIGPGTTLEHLAVELKTR 116
>gi|291085903|ref|ZP_06354380.2| hypothetical protein CIT292_08844 [Citrobacter youngae ATCC 29220]
gi|291069552|gb|EFE07661.1| glycerol-3-phosphate regulon repressor [Citrobacter youngae ATCC
29220]
Length = 274
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A Y+ DG T+ + G+T ++ L + + + S R
Sbjct: 88 EEKKAIAEAVADYIPDGSTVFITIGTTVEQVARAL---LNHNHLRIITNSLRVAHILYNN 144
Query: 65 HHIPLHSPEDVSSVD------------LSIDGFDEIDSRLRLIKGYGGALLR-------- 104
+ P ++ D + + + I+ GALL
Sbjct: 145 PRFEVMVPGGTLRPHNSGIIGPSATAFVADFRADYLVTSVGAIES-DGALLEFDVNEASV 203
Query: 105 EKIIAHAASRFIVIGDESKR 124
K + + ++ D +K
Sbjct: 204 VKTMMAHSRHILLAADHTKY 223
>gi|332364334|gb|EGJ42108.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK355]
Length = 247
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 17/135 (12%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH- 65
KR A+ A + V D T+ + +GST + N + +
Sbjct: 72 KRRIAQEAAKIVQDNETIMIESGSTCALLAEEICLTKKNVKIITNSYFIADYIKQTDSCK 131
Query: 66 ------HIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL-LREK---------IIA 109
S V + + F ++ GY L K ++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLKEMIRFFHVEHAFVGTDGYDENLGFTGKDLMRSEVVQYMS 191
Query: 110 HAASRFIVIGDESKR 124
A+ + IV+ D SK
Sbjct: 192 DASDQMIVLTDSSKF 206
>gi|26247618|ref|NP_753658.1| putative transcriptional regulator YciT [Escherichia coli CFT073]
gi|227886281|ref|ZP_04004086.1| transcriptional regulator YciT [Escherichia coli 83972]
gi|300971704|ref|ZP_07171577.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|301046129|ref|ZP_07193304.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|26108020|gb|AAN80220.1|AE016760_79 Hypothetical transcriptional regulator yciT [Escherichia coli
CFT073]
gi|227836485|gb|EEJ46951.1| transcriptional regulator YciT [Escherichia coli 83972]
gi|300301862|gb|EFJ58247.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 185-1]
gi|300411190|gb|EFJ94728.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 45-1]
gi|307553347|gb|ADN46122.1| transcriptional regulator [Escherichia coli ABU 83972]
gi|315295307|gb|EFU54637.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 153-1]
gi|315297201|gb|EFU56481.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 16-3]
Length = 249
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNATIITVSS 119
>gi|319938890|ref|ZP_08013254.1| phosphotransferase system repressor [Streptococcus anginosus
1_2_62CV]
gi|319811940|gb|EFW08206.1| phosphotransferase system repressor [Streptococcus anginosus
1_2_62CV]
Length = 239
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 46/143 (32%), Gaps = 15/143 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
K A++A + + + + + G+T + + L+ K A + IP+
Sbjct: 71 KLRIAQKAAELIQEQDVIFIDAGTTNELLINELSSKHMTVVTNSIHHATKLVEKNIPTVI 130
Query: 57 NTENFCKIHHIPL--HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAHAA 112
+ + + ++ + G + ID ++ I A
Sbjct: 131 IGGVVKSSTDASIGGVALNQIGQLNFNKAFIGMNGIDENFYTTPDMEEG-AVKRAILENA 189
Query: 113 SRFIVIGDESKRVDFLGRGMLPI 135
+ ++ D SK + PI
Sbjct: 190 KQTYILADASKIGQTSFVKVAPI 212
>gi|317492328|ref|ZP_07950757.1| deoR family bacterial regulatory protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316919667|gb|EFV40997.1| deoR family bacterial regulatory protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 253
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
M +K+ A A V DG T+ + GST LA++
Sbjct: 67 MINFTLKQKLAAYAASLVNDGETIFIENGSTNALLARYLAERKR 110
>gi|256750663|ref|ZP_05491549.1| transcriptional regulator, DeoR family [Thermoanaerobacter
ethanolicus CCSD1]
gi|256750503|gb|EEU63521.1| transcriptional regulator, DeoR family [Thermoanaerobacter
ethanolicus CCSD1]
Length = 251
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K+ A RA+ + +G + + GST +A I N + V+
Sbjct: 76 EEKQKIAARAVAEIQEGNVIFLDAGSTTYH----IARAIRNFKGITVVT 120
>gi|206900504|ref|YP_002249996.1| transcription regulator, putative [Dictyoglomus thermophilum
H-6-12]
gi|206739607|gb|ACI18665.1| transcription regulator, putative [Dictyoglomus thermophilum
H-6-12]
Length = 252
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 22/132 (16%)
Query: 14 AIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRV--QVIPSSRNTENFCKIHHIPLHS 71
AI + D + M G+T + L + I ++ N K +
Sbjct: 84 AISLLKDNSVIAMSGGTTIYYMVQALDQSPITDLTILTNSITTAWAVINLRKNFRLIHSG 143
Query: 72 ------------------PEDVSSVDLSIDGFDEID-SRLRLIKGYGGALLREKIIAHAA 112
+++ +D G + +D A + K I A
Sbjct: 144 GTAKERSFECIGGHVIKFFQEIGKIDYYFFGANGVDIKNGITFFDMEEAEV-AKTIISKA 202
Query: 113 SRFIVIGDESKR 124
+ ++I D SK
Sbjct: 203 EKKVLIVDSSKF 214
>gi|116248878|ref|YP_764719.1| deoR family transcriptional regulator [Rhizobium leguminosarum bv.
viciae 3841]
gi|115253528|emb|CAK11920.1| DeoR family regulator, represses eryR promoter [Rhizobium
leguminosarum bv. viciae 3841]
Length = 258
Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K A A++ V GMT+ + GS A +L + + + +I ++ K
Sbjct: 76 NEAKLAMAETALELVEPGMTVMVNDGSMAA----VLGEMLLQKRPLTLITNNAAIMERLK 131
>gi|325571786|ref|ZP_08147167.1| lactose PTS family porter repressor [Enterococcus casseliflavus
ATCC 12755]
gi|325155682|gb|EGC67883.1| lactose PTS family porter repressor [Enterococcus casseliflavus
ATCC 12755]
Length = 255
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T ++ + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLEQLALEL--KGRKGYKIRVIT 124
>gi|296876418|ref|ZP_06900470.1| lactose PTS family porter repressor [Streptococcus parasanguinis
ATCC 15912]
gi|296432708|gb|EFH18503.1| lactose PTS family porter repressor [Streptococcus parasanguinis
ATCC 15912]
Length = 247
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----------KIANGFRVQVIPS 54
Q+K A +A + + D + + G+T + + + + A + +P+
Sbjct: 77 QVKSKIAVKAAELIKDHDVVFIDAGTTNELLVQEIVNPTVTVVTNSIHHATKLVERNVPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
I + + ++ + G + ID ++ I
Sbjct: 137 VIIGGMVKSSTDASIGGIALNQIGQLNFDKAFLGMNGIDDEFYSTPDLEEG-SVKRAIIE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + ++ D+SK + PI
Sbjct: 196 NAKKTYILADDSKIGVTSFVKVAPI 220
>gi|227550246|ref|ZP_03980295.1| DeoR family transcriptional regulator [Enterococcus faecium TX1330]
gi|257880714|ref|ZP_05660367.1| lactose phosphotransferase system repressor [Enterococcus faecium
1,230,933]
gi|257883669|ref|ZP_05663322.1| lactose phosphotransferase system repressor [Enterococcus faecium
1,231,502]
gi|257886441|ref|ZP_05666094.1| lactose phosphotransferase system repressor [Enterococcus faecium
1,231,501]
gi|257889153|ref|ZP_05668806.1| lactose transport regulator [Enterococcus faecium 1,141,733]
gi|257897569|ref|ZP_05677222.1| lactose transport regulator [Enterococcus faecium Com12]
gi|257900250|ref|ZP_05679903.1| lactose transport regulator [Enterococcus faecium Com15]
gi|293570802|ref|ZP_06681850.1| lactose phosphotransferase system repressor [Enterococcus faecium
E980]
gi|294622404|ref|ZP_06701429.1| lactose phosphotransferase system repressor [Enterococcus faecium
U0317]
gi|227180611|gb|EEI61583.1| DeoR family transcriptional regulator [Enterococcus faecium TX1330]
gi|257814942|gb|EEV43700.1| lactose phosphotransferase system repressor [Enterococcus faecium
1,230,933]
gi|257819327|gb|EEV46655.1| lactose phosphotransferase system repressor [Enterococcus faecium
1,231,502]
gi|257822297|gb|EEV49427.1| lactose phosphotransferase system repressor [Enterococcus faecium
1,231,501]
gi|257825225|gb|EEV52139.1| lactose transport regulator [Enterococcus faecium 1,141,733]
gi|257834134|gb|EEV60555.1| lactose transport regulator [Enterococcus faecium Com12]
gi|257838162|gb|EEV63236.1| lactose transport regulator [Enterococcus faecium Com15]
gi|291598105|gb|EFF29212.1| lactose phosphotransferase system repressor [Enterococcus faecium
U0317]
gi|291609133|gb|EFF38407.1| lactose phosphotransferase system repressor [Enterococcus faecium
E980]
Length = 255
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T ++ + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLEQLALEL--KGRKGYKIRVIT 124
>gi|69247092|ref|ZP_00604224.1| regulatory protein, DeoR [Enterococcus faecium DO]
gi|257881339|ref|ZP_05660992.1| regulatory protein [Enterococcus faecium 1,231,502]
gi|257890557|ref|ZP_05670210.1| regulatory protein [Enterococcus faecium 1,231,410]
gi|258615240|ref|ZP_05713010.1| LacR [Enterococcus faecium DO]
gi|260558257|ref|ZP_05830453.1| regulatory protein [Enterococcus faecium C68]
gi|261206941|ref|ZP_05921630.1| regulatory protein [Enterococcus faecium TC 6]
gi|293562917|ref|ZP_06677384.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1162]
gi|293567960|ref|ZP_06679301.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1071]
gi|294613873|ref|ZP_06693814.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1636]
gi|294623788|ref|ZP_06702616.1| lactose phosphotransferase system repressor [Enterococcus faecium
U0317]
gi|314937382|ref|ZP_07844719.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a04]
gi|314942943|ref|ZP_07849756.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133C]
gi|314947943|ref|ZP_07851347.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0082]
gi|314951878|ref|ZP_07854915.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133A]
gi|314991514|ref|ZP_07856991.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133B]
gi|314994965|ref|ZP_07860085.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a01]
gi|68194976|gb|EAN09443.1| regulatory protein, DeoR [Enterococcus faecium DO]
gi|257816997|gb|EEV44325.1| regulatory protein [Enterococcus faecium 1,231,502]
gi|257826917|gb|EEV53543.1| regulatory protein [Enterococcus faecium 1,231,410]
gi|260075431|gb|EEW63737.1| regulatory protein [Enterococcus faecium C68]
gi|260078569|gb|EEW66271.1| regulatory protein [Enterococcus faecium TC 6]
gi|291589545|gb|EFF21352.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1071]
gi|291593265|gb|EFF24833.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1636]
gi|291596742|gb|EFF27965.1| lactose phosphotransferase system repressor [Enterococcus faecium
U0317]
gi|291605043|gb|EFF34510.1| lactose phosphotransferase system repressor [Enterococcus faecium
E1162]
gi|313590691|gb|EFR69536.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a01]
gi|313593994|gb|EFR72839.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133B]
gi|313595990|gb|EFR74835.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133A]
gi|313598415|gb|EFR77260.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133C]
gi|313643251|gb|EFS07831.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0133a04]
gi|313645541|gb|EFS10121.1| DeoR-like helix-turn-helix protein [Enterococcus faecium TX0082]
Length = 261
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFC 62
+Q K+ A A + +G T+ +G G+T + LLA + N ++++I ++ +
Sbjct: 76 QIQEKKEIAATAASLIHEGETIFLGPGTT----IELLATHLLNK-KIRIITNNYPVFDIL 130
Query: 63 KIHHIPLHSP 72
P
Sbjct: 131 AQADGPEILL 140
>gi|255036886|ref|YP_003087507.1| transcriptional regulator, DeoR family [Dyadobacter fermentans DSM
18053]
gi|254949642|gb|ACT94342.1| transcriptional regulator, DeoR family [Dyadobacter fermentans DSM
18053]
Length = 255
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 25/142 (17%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
++ + K++ AR AI + + ++ +G+G+T E L + P+ + T
Sbjct: 75 NSDE-KQSIAREAIGLIRETDSIMIGSGTTVFELARCLHPT---KQITVITPAVKVTLEL 130
Query: 62 CKIHHIPLHSPE-------------------DVSSVDLSIDGFDEIDSRLRL-IKGYGGA 101
++ + D S + G D ID L I A
Sbjct: 131 SNRPNVEVLQLGGLIRQNSSSVAGSYAEYILDHISCGVLFIGVDGIDFDFGLSISNLTEA 190
Query: 102 LLREKIIAHAASRFIVIGDESK 123
L +K+I A +V+ D +K
Sbjct: 191 GLNQKMIET-AQNVVVLADHTK 211
>gi|154685652|ref|YP_001420813.1| LacR [Bacillus amyloliquefaciens FZB42]
gi|154351503|gb|ABS73582.1| LacR [Bacillus amyloliquefaciens FZB42]
Length = 253
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG 46
+ K A A YV DG T+ +G G+T + LLA + +
Sbjct: 76 QMDEKGKIAELAASYVNDGDTVFLGPGTT----IELLAKHLLHK 115
>gi|47569243|ref|ZP_00239929.1| transcriptional regulator, DeoR family [Bacillus cereus G9241]
gi|47554117|gb|EAL12482.1| transcriptional regulator, DeoR family [Bacillus cereus G9241]
Length = 250
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 49/147 (33%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N
Sbjct: 77 QIKQQIAKYAANIVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENHIHA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 196 TLANEGYFLIDESKFSEVAFAKIANVE 222
>gi|302390369|ref|YP_003826190.1| succinate CoA transferase [Thermosediminibacter oceani DSM 16646]
gi|302200997|gb|ADL08567.1| succinate CoA transferase [Thermosediminibacter oceani DSM 16646]
Length = 520
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLG 25
+ K A A + DGM +G
Sbjct: 35 EAKIMTAEEAASLIKDGMIVG 55
>gi|269960941|ref|ZP_06175311.1| transcriptional regulator, DeoR family [Vibrio harveyi 1DA3]
gi|269834381|gb|EEZ88470.1| transcriptional regulator, DeoR family [Vibrio harveyi 1DA3]
Length = 253
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR-VQVIPS 54
K + A+ A + + + + +GST + L DK +AN ++ P+
Sbjct: 79 KLSLAKAAASLIREHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSLHVANALNELESEPT 138
Query: 55 --------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++E+F + D + + DG D + G + K
Sbjct: 139 LLMTGGTWDTHSESFQGKVAESVLRAYDFDQLFIGADGIDLERGTTTFNELVGLS----K 194
Query: 107 IIAHAASRFIVIGDESKR 124
++A + IV+ + K
Sbjct: 195 VMAEVSREVIVMIESEKV 212
>gi|307265758|ref|ZP_07547310.1| transcriptional regulator, DeoR family [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919272|gb|EFN49494.1| transcriptional regulator, DeoR family [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 251
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K+ A RA+ + +G + + GST +A I N + V+
Sbjct: 76 EEKQKIAARAVAEIQEGNVIFLDAGSTTYH----IARAIRNFKGITVVT 120
>gi|229546335|ref|ZP_04435060.1| DeoR family transcriptional regulator [Enterococcus faecalis
TX1322]
gi|256854615|ref|ZP_05559979.1| lactose transport regulator [Enterococcus faecalis T8]
gi|307289705|ref|ZP_07569647.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0411]
gi|229308522|gb|EEN74509.1| DeoR family transcriptional regulator [Enterococcus faecalis
TX1322]
gi|256710175|gb|EEU25219.1| lactose transport regulator [Enterococcus faecalis T8]
gi|306499255|gb|EFM68728.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0411]
gi|315029222|gb|EFT41154.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX4000]
Length = 255
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T ++ + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLEQLALEL--KGRKGYKIRVIT 124
>gi|229915892|ref|YP_002884538.1| DeoR family transcriptional regulator [Exiguobacterium sp. AT1b]
gi|229467321|gb|ACQ69093.1| transcriptional regulator, DeoR family [Exiguobacterium sp. AT1b]
Length = 247
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K ARRA ++ DGM++ + G+T + + L G ++ V+
Sbjct: 79 KVAIARRAATFIEDGMSIYLDAGTTTQAMVPFL-----QGKKIVVVT 120
>gi|315280883|ref|ZP_07869656.1| DNA-binding protein IolR [Listeria marthii FSL S4-120]
gi|313615474|gb|EFR88846.1| DNA-binding protein IolR [Listeria marthii FSL S4-120]
Length = 253
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|313610857|gb|EFR85830.1| DNA-binding protein IolR [Listeria monocytogenes FSL F2-208]
Length = 253
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|262165345|ref|ZP_06033082.1| transcriptional repressor of aga operon [Vibrio mimicus VM223]
gi|262025061|gb|EEY43729.1| transcriptional repressor of aga operon [Vibrio mimicus VM223]
Length = 256
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGST----AKEFMIL-----------LADKIANG 46
+ +K A V DG TL + +GST A +A +AN
Sbjct: 75 NQD-IKSLLGAYAASLVDDGDTLILDSGSTTEQIAFHLTDKKQLKVMTNAINIAYHLANR 133
Query: 47 FRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++VI + +N+ + L + + L +DGFD++ G A
Sbjct: 134 DNIEVIVTGGLMRKNSYSLHGDSGEALLGQFRFNKLFLGVDGFDKLTG--ITTPHSGEAN 191
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ K++ AA I + D SK
Sbjct: 192 INRKMVE-AAQMVIAVTDSSKF 212
>gi|254854100|ref|ZP_05243448.1| transcriptional regulator [Listeria monocytogenes FSL R2-503]
gi|300765637|ref|ZP_07075615.1| DeoR family transcriptional regulator [Listeria monocytogenes FSL
N1-017]
gi|258607493|gb|EEW20101.1| transcriptional regulator [Listeria monocytogenes FSL R2-503]
gi|300513625|gb|EFK40694.1| DeoR family transcriptional regulator [Listeria monocytogenes FSL
N1-017]
Length = 253
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|313625161|gb|EFR95015.1| DNA-binding protein IolR [Listeria innocua FSL J1-023]
Length = 253
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|268611088|ref|ZP_06144815.1| transcription repressor of fructose operon FruR [Ruminococcus
flavefaciens FD-1]
Length = 248
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K A+ A + DG + + G+T ++ + ++ K
Sbjct: 81 KTAIAKYAASLIEDGDFVFIDAGTTTEKIIDYISAK 116
>gi|229548443|ref|ZP_04437168.1| DeoR family transcriptional regulator [Enterococcus faecalis ATCC
29200]
gi|255971065|ref|ZP_05421651.1| lactose transport regulator [Enterococcus faecalis T1]
gi|256617432|ref|ZP_05474278.1| lactose transport regulator [Enterococcus faecalis ATCC 4200]
gi|256957610|ref|ZP_05561781.1| lactose transport regulator [Enterococcus faecalis DS5]
gi|257080150|ref|ZP_05574511.1| lactose transport regulator [Enterococcus faecalis JH1]
gi|257088981|ref|ZP_05583342.1| lactose transport regulator [Enterococcus faecalis CH188]
gi|257420790|ref|ZP_05597780.1| lactose transport regulator [Enterococcus faecalis X98]
gi|300861703|ref|ZP_07107785.1| transcriptional regulator, DeoR family [Enterococcus faecalis TUSoD
Ef11]
gi|307268362|ref|ZP_07549742.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX4248]
gi|312903054|ref|ZP_07762237.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0635]
gi|312952125|ref|ZP_07771006.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0102]
gi|229306408|gb|EEN72404.1| DeoR family transcriptional regulator [Enterococcus faecalis ATCC
29200]
gi|255962083|gb|EET94559.1| lactose transport regulator [Enterococcus faecalis T1]
gi|256596959|gb|EEU16135.1| lactose transport regulator [Enterococcus faecalis ATCC 4200]
gi|256948106|gb|EEU64738.1| lactose transport regulator [Enterococcus faecalis DS5]
gi|256988180|gb|EEU75482.1| lactose transport regulator [Enterococcus faecalis JH1]
gi|256997793|gb|EEU84313.1| lactose transport regulator [Enterococcus faecalis CH188]
gi|257162614|gb|EEU92574.1| lactose transport regulator [Enterococcus faecalis X98]
gi|300848860|gb|EFK76615.1| transcriptional regulator, DeoR family [Enterococcus faecalis TUSoD
Ef11]
gi|306515305|gb|EFM83840.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX4248]
gi|310629907|gb|EFQ13190.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0102]
gi|310633606|gb|EFQ16889.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0635]
gi|315035512|gb|EFT47444.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0027]
gi|315156792|gb|EFU00809.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0043]
gi|315159778|gb|EFU03795.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0312]
gi|315163187|gb|EFU07204.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0645]
gi|315578251|gb|EFU90442.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0630]
gi|323479674|gb|ADX79113.1| Lactose phosphotransferase system repressor [Enterococcus faecalis
62]
gi|329578003|gb|EGG59420.1| transcriptional regulator, DeoR family [Enterococcus faecalis
TX1467]
Length = 255
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T ++ + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLEQLALEL--KGRKGYKIRVIT 124
>gi|228986856|ref|ZP_04146983.1| Fructose repressor [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229157296|ref|ZP_04285374.1| Fructose repressor [Bacillus cereus ATCC 4342]
gi|228626023|gb|EEK82772.1| Fructose repressor [Bacillus cereus ATCC 4342]
gi|228772805|gb|EEM21244.1| Fructose repressor [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 269
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 96 QIKQQIAKYAANIVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENHIRA 155
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 156 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 214
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 215 TLANEGYFLIDESKFSEVAFAKIANVE 241
>gi|283796616|ref|ZP_06345769.1| glucosamine-6-phosphate deaminase [Clostridium sp. M62/1]
gi|291076040|gb|EFE13404.1| glucosamine-6-phosphate deaminase [Clostridium sp. M62/1]
Length = 247
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 2 DALQMKRNAA--RRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF 47
+ ++ R AA A V LG+ TGST + L D+ G
Sbjct: 8 NYEELSRRAADLIAAQILVKPDCVLGLATGSTPEGTYKELVDRYEKGI 55
>gi|295115327|emb|CBL36174.1| glucosamine-6-phosphate isomerase [butyrate-producing bacterium
SM4/1]
Length = 247
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 2 DALQMKRNAA--RRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF 47
+ ++ R AA A V LG+ TGST + L D+ G
Sbjct: 8 NYEELSRRAADLIAAQILVKPDCVLGLATGSTPEGTYKELVDRYEKGI 55
>gi|254828985|ref|ZP_05233672.1| transcriptional regulator [Listeria monocytogenes FSL N3-165]
gi|258601396|gb|EEW14721.1| transcriptional regulator [Listeria monocytogenes FSL N3-165]
Length = 253
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|16802427|ref|NP_463912.1| hypothetical protein lmo0382 [Listeria monocytogenes EGD-e]
gi|16409760|emb|CAC98461.1| lmo0382 [Listeria monocytogenes EGD-e]
Length = 253
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|313620693|gb|EFR91983.1| DeoR family transcriptional regulator [Listeria innocua FSL S4-378]
Length = 254
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKEAIAKEAATLVKNNQTIILXXXSTAL----ALAKELHGFSRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G GA L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGANLIENIHA 166
>gi|226223007|ref|YP_002757114.1| transcription repressor of myo-inositol catabolism operon IolR
[Listeria monocytogenes Clip81459]
gi|254825811|ref|ZP_05230812.1| transcriptional regulator [Listeria monocytogenes FSL J1-194]
gi|254932676|ref|ZP_05266035.1| transcriptional regulator [Listeria monocytogenes HPB2262]
gi|254993420|ref|ZP_05275610.1| transcription repressor of myo-inositol catabolism operon IolR
[Listeria monocytogenes FSL J2-064]
gi|225875469|emb|CAS04168.1| Putative transcription repressor of myo-inositol catabolism operon
IolR [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|293584235|gb|EFF96267.1| transcriptional regulator [Listeria monocytogenes HPB2262]
gi|293595052|gb|EFG02813.1| transcriptional regulator [Listeria monocytogenes FSL J1-194]
gi|332310791|gb|EGJ23886.1| DNA-binding protein IolR [Listeria monocytogenes str. Scott A]
Length = 253
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|217965528|ref|YP_002351206.1| DNA-binding protein IolR [Listeria monocytogenes HCC23]
gi|217334798|gb|ACK40592.1| DNA-binding protein IolR [Listeria monocytogenes HCC23]
gi|307569918|emb|CAR83097.1| transcriptional regulator, DeoR family [Listeria monocytogenes L99]
Length = 253
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|46906613|ref|YP_013002.1| DeoR family transcriptional regulator [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091517|ref|ZP_00229314.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
4b H7858]
gi|46879878|gb|AAT03179.1| transcriptional regulator, DeoR family [Listeria monocytogenes
serotype 4b str. F2365]
gi|47020194|gb|EAL10930.1| transcriptional regulator, DeoR family [Listeria monocytogenes str.
4b H7858]
gi|328467667|gb|EGF38719.1| DeoR family transcriptional regulator [Listeria monocytogenes 1816]
Length = 253
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|313620639|gb|EFR91952.1| DNA-binding protein IolR [Listeria innocua FSL S4-378]
Length = 253
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|258626288|ref|ZP_05721135.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM603]
gi|258581340|gb|EEW06242.1| Putative aga operon transcriptional repressor [Vibrio mimicus
VM603]
Length = 224
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 23/142 (16%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGST----AKEFMIL-----------LADKIANG 46
+ +K A V DG TL + +GST A +A +AN
Sbjct: 45 NQD-IKSQLGAYAASLVDDGDTLILDSGSTTEQIAFHLTDKKQLKVMTNAINIAYHLANR 103
Query: 47 FRVQVIPS----SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
++VI + +N+ + L + + L +DGFD++ G
Sbjct: 104 DNIEVIVTGGLMRKNSYSLHGDSGEALLGQFRFNKLFLGVDGFDKLTGITTPHSGEANI- 162
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + AA I + D SK
Sbjct: 163 --NRKMVEAAQMVIAVTDSSKF 182
>gi|254831785|ref|ZP_05236440.1| transcription repressor of myo-inositol catabolism operon IolR
[Listeria monocytogenes 10403S]
Length = 253
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|16799477|ref|NP_469745.1| hypothetical protein lin0400 [Listeria innocua Clip11262]
gi|16412829|emb|CAC95633.1| lin0400 [Listeria innocua Clip11262]
Length = 253
Score = 36.0 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|315145905|gb|EFT89921.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX2141]
Length = 255
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T ++ + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLEQLALEL--KGRKGYKIRVIT 124
>gi|255659832|ref|ZP_05405241.1| deoxyribonucleoside regulator [Mitsuokella multacida DSM 20544]
gi|260847907|gb|EEX67914.1| deoxyribonucleoside regulator [Mitsuokella multacida DSM 20544]
Length = 314
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 2 DALQMKRNAARRAIQY----VVDGMTLGMGTGS 30
D ++K+ +A +Y V D +G+G GS
Sbjct: 86 DNREIKKAIGLKAAEYLYDIVKDHDIIGVGWGS 118
>gi|241113658|ref|YP_002973493.1| transcriptional regulator, DeoR family [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861866|gb|ACS59532.1| transcriptional regulator, DeoR family [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 258
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCK 63
+ K A+ A++ V GMT+ + GS A +L + + + +I ++ K
Sbjct: 76 NEAKLAMAQTALELVEPGMTVMVNDGSMAA----VLGEMLLQKRPLTLITNNAAIMERLK 131
>gi|312866723|ref|ZP_07726937.1| transcriptional regulator, DeoR family [Streptococcus parasanguinis
F0405]
gi|311097804|gb|EFQ56034.1| transcriptional regulator, DeoR family [Streptococcus parasanguinis
F0405]
Length = 247
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----------KIANGFRVQVIPS 54
Q+K A +A + + D + + G+T + + + + A + +P+
Sbjct: 77 QVKSKIAVKAAELIKDHDVIFIDAGTTNELLVQEIVNPTVTVVTNSIHHATKLVERNVPT 136
Query: 55 SRNTENFCKIHHIPL--HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + + ++ + G + ID ++ I
Sbjct: 137 VIIGGKVKSSTDASIGGIALNQIGQLNFDKAFLGMNGIDDEFYSTPDLEEG-SVKRAIIE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + ++ D+SK + PI
Sbjct: 196 NAKKTYILADDSKIGVTSFVKVAPI 220
>gi|302557788|ref|ZP_07310130.1| LOW QUALITY PROTEIN: DeoR family transcriptional regulator
[Streptomyces griseoflavus Tu4000]
gi|302475406|gb|EFL38499.1| LOW QUALITY PROTEIN: DeoR family transcriptional regulator
[Streptomyces griseoflavus Tu4000]
Length = 259
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS 54
KR AR A V G T+ + GST LA ++ + V +
Sbjct: 81 KRAIARWAAAQVQPGETVLLDAGSTVG----ALAHELRTAKDLTVATT 124
>gi|229097522|ref|ZP_04228482.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-29]
gi|228685926|gb|EEL39844.1| Transcriptional regulator, DeoR [Bacillus cereus Rock3-29]
Length = 239
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 22/142 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A + + D + + G+T + + + DK IP+
Sbjct: 57 EEKRKIAMEASKIIEDNDIIAIEIGTTTMQILDFIYDKKNLTILTNSIPAVNKIIELKDQ 116
Query: 65 HHIPLHSPE----------------------DVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ D +V+ D I L Y
Sbjct: 117 YDSFDCRLIVIGGILNTNSLALSGEMTLNYLDHFTVNKLFASCDGISLEKELTCSYIEDA 176
Query: 103 LREKIIAHAASRFIVIGDESKR 124
K + + A + +++ DESK
Sbjct: 177 QIFKQLKNNAKQVVMMADESKF 198
>gi|261822171|ref|YP_003260277.1| DeoR family transcriptional regulator [Pectobacterium wasabiae
WPP163]
gi|261606184|gb|ACX88670.1| transcriptional regulator, DeoR family [Pectobacterium wasabiae
WPP163]
Length = 256
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ AR A+Q + G TL + GST L
Sbjct: 78 KQAIARAAVQQLKAGQTLFIDAGSTTSLLADEL 110
>gi|145294250|ref|YP_001137071.1| hypothetical protein cgR_0206 [Corynebacterium glutamicum R]
gi|140844170|dbj|BAF53169.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 225
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K AR A V DGMT+ + G+T + + L +
Sbjct: 48 KEAIAREAADRVTDGMTIFLDAGTTLQALVPYLEPR 83
>gi|126650339|ref|ZP_01722567.1| transcriptional regulator, deoR family protein [Bacillus sp.
B14905]
gi|126592989|gb|EAZ86971.1| transcriptional regulator, deoR family protein [Bacillus sp.
B14905]
Length = 257
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 24/164 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF----RVQVIPSSRNTEN 60
+ K+ A A + + +G + + G+T E +L +K ++++ +N
Sbjct: 79 EKKQEVASVAAELIEEGQAIALNGGTTTIEIAKVLVEKFHRLTIITNDIRILSILGANKN 138
Query: 61 FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGY--------GGALLR-------- 104
F I ++P++ L +EI S + + L
Sbjct: 139 FKVILSGGFYNPDEY---TLYGKQCEEILSNFNIDTAFITVNGLSLKNGLTDFRIHEVDV 195
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPI-EIDQFGVNKTLS 147
K I ++ IV+ D +K + P+ EID + ++S
Sbjct: 196 IKAILSRSNHKIVVADSTKFETSSYINICPLNEIDLIVSDSSIS 239
>gi|114567636|ref|YP_754790.1| hypothetical protein Swol_2128 [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114338571|gb|ABI69419.1| conserved hypothetical protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 448
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 3 ALQMKRNAARR-AIQYVVDGMTLG--MGTGSTAKEFMILLADKIANGFRVQVIPS 54
K+ + A + V G + +GTGS + + + D+ V + S
Sbjct: 8 QDYNKKLVSYEEAAKLVKSGDVVASPLGTGSCSGQMFDAILDRHEELQDVIISDS 62
>gi|315642135|ref|ZP_07896964.1| lactose PTS family porter repressor [Enterococcus italicus DSM
15952]
gi|315482329|gb|EFU72877.1| lactose PTS family porter repressor [Enterococcus italicus DSM
15952]
Length = 255
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T ++ + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTVFIGPGTTLEQLALEL--KGRKGYKIRVIT 124
>gi|261408833|ref|YP_003245074.1| DeoR family transcriptional regulator [Paenibacillus sp. Y412MC10]
gi|261285296|gb|ACX67267.1| transcriptional regulator, DeoR family [Paenibacillus sp. Y412MC10]
Length = 249
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 33/174 (18%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K AR A V DG ++ + G+T + + + V V+ + +
Sbjct: 77 QQKNAVARLAAAQVEDGESIYLDAGTTTLAMIPFI-----DAKDVTVVTNGLSHIEALVS 131
Query: 65 HHIPLHSPEDVSSVD-------LSIDGFDEIDSRLRLIKGYG-------------GALLR 104
I + + + +++ D + G AL++
Sbjct: 132 KRIKSYLLGGMMKIHTKAVIGSIALQNMDNFRFDRCFLGTNGVDAEMGYTTPDPEEALIK 191
Query: 105 EKIIAHAASRFIVIGDESKRVDFL-------GRGMLPIEIDQFGVNKTLSALKE 151
+ +AS ++ + D SK + L E K +S +
Sbjct: 192 RRAHQLSASSYV-LADSSKIGEVSFAKLLDLSEATLITESLPESWKKVISQKTK 244
>gi|260583226|ref|ZP_05851004.1| L-fuculose phosphate aldolase [Haemophilus influenzae NT127]
gi|260093728|gb|EEW77638.1| L-fuculose phosphate aldolase [Haemophilus influenzae NT127]
Length = 249
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEF------------------MILLADKIANGF 47
KR+ A++A+ + + +G+ ST+ F + L N
Sbjct: 76 AKRHIAQKALDLLYENAVIGLDASSTSWYFAYLMPDIPCTVVTNSMFNINAL----VNKS 131
Query: 48 RVQVIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ I + + + PL ++ S+ ID + + ++
Sbjct: 132 NVKTIVTGGVYSAKYEAFYGPLSEYLLQRLHINFSVFSCSGIDKNGNIWESNELNASLKR 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R ++ D SK
Sbjct: 192 KMMEASERAYLLIDSSKF 209
>gi|238918716|ref|YP_002932230.1| glucitol operon repressor [Edwardsiella ictaluri 93-146]
gi|238868284|gb|ACR67995.1| glucitol operon repressor [Edwardsiella ictaluri 93-146]
Length = 257
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 44/137 (32%), Gaps = 22/137 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSR----- 56
K A RA V DG TL + +GST + L + + N + +
Sbjct: 81 KSRIAARAAALVQDGDTLIIDSGSTTAQIAPFLKVRRHLVVVTNALNIACELAGYEQIDV 140
Query: 57 ---------NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
N + + L +DGFD I G A L ++
Sbjct: 141 LVLGGNVRQNAYSLYGQTAEQQLRQYHFDRLFLGVDGFDLI--CGITTPHAGEAQLN-RV 197
Query: 108 IAHAASRFIVIGDESKR 124
+ AS I + D SK
Sbjct: 198 MCDVASEIIAVVDASKF 214
>gi|145637750|ref|ZP_01793401.1| L-fucose operon activator [Haemophilus influenzae PittHH]
gi|145269048|gb|EDK09000.1| L-fucose operon activator [Haemophilus influenzae PittHH]
Length = 249
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEF------------------MILLADKIANGF 47
KR+ A++A+ + + +G+ ST+ F + L N
Sbjct: 76 AKRHIAQKALDLLYENAVIGLDASSTSWYFAYLMPDIPCTVVTNSMFNINAL----VNKS 131
Query: 48 RVQVIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ I + + + PL ++ S+ ID + + ++
Sbjct: 132 NVKTIVTGGVYSAKYEAFYGPLSEYLLQRLHINFSVFSCSGIDKNGNIWESNELNASLKR 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R ++ D SK
Sbjct: 192 KMMEASERAYLLIDSSKF 209
>gi|145628407|ref|ZP_01784208.1| L-fucose operon activator [Haemophilus influenzae 22.1-21]
gi|144980182|gb|EDJ89841.1| L-fucose operon activator [Haemophilus influenzae 22.1-21]
Length = 249
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEF------------------MILLADKIANGF 47
KR+ A++A+ + + +G+ ST+ F + L N
Sbjct: 76 AKRHIAQKALDLLYENAVIGLDASSTSWYFAYLMPNIPCTVVTNSMFNINAL----VNKS 131
Query: 48 RVQVIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ I + + + PL ++ S+ ID + + ++
Sbjct: 132 NVKTIVTGGVYSAKYEAFYGPLSEYLLQRLHINFSVFSCSGIDKNGNIWESNELNASLKR 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R ++ D SK
Sbjct: 192 KMMEASERAYLLIDSSKF 209
>gi|148825510|ref|YP_001290263.1| L-fucose isomerase [Haemophilus influenzae PittEE]
gi|229847515|ref|ZP_04467610.1| L-fucose isomerase [Haemophilus influenzae 7P49H1]
gi|148715670|gb|ABQ97880.1| L-fucose isomerase [Haemophilus influenzae PittEE]
gi|229809578|gb|EEP45306.1| L-fucose isomerase [Haemophilus influenzae 7P49H1]
gi|309972647|gb|ADO95848.1| L-fucose operon regulator [Haemophilus influenzae R2846]
Length = 249
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEF------------------MILLADKIANGF 47
KR+ A++A+ + + +G+ ST+ F + L N
Sbjct: 76 AKRHIAQKALDLLYENAVIGLDASSTSWYFAYLMPDIPCTVVTNSMFNINAL----VNKS 131
Query: 48 RVQVIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ I + + + PL ++ S+ ID + + ++
Sbjct: 132 NVKTIVTGGVYSAKYEAFYGPLSEYLLQRLHINFSVFSCSGIDKNGNIWESNELNASLKR 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R ++ D SK
Sbjct: 192 KMMEASERAYLLIDSSKF 209
>gi|16272557|ref|NP_438773.1| L-fucose operon activator [Haemophilus influenzae Rd KW20]
gi|145635744|ref|ZP_01791438.1| L-fuculose phosphate aldolase [Haemophilus influenzae PittAA]
gi|145640055|ref|ZP_01795651.1| L-fuculose phosphate aldolase [Haemophilus influenzae PittII]
gi|148827904|ref|YP_001292657.1| L-fucose isomerase [Haemophilus influenzae PittGG]
gi|229845570|ref|ZP_04465697.1| L-fucose isomerase [Haemophilus influenzae 6P18H1]
gi|260581429|ref|ZP_05849242.1| L-fucose operon activator [Haemophilus influenzae RdAW]
gi|319775343|ref|YP_004137831.1| DNA-binding transcriptional activator [Haemophilus influenzae
F3047]
gi|319897784|ref|YP_004135981.1| DNA-binding transcriptional activator [Haemophilus influenzae
F3031]
gi|329122660|ref|ZP_08251239.1| L-fucose operon activator [Haemophilus aegyptius ATCC 11116]
gi|1169778|sp|P44780|FUCR_HAEIN RecName: Full=L-fucose operon activator
gi|1573609|gb|AAC22274.1| L-fucose operon activator (fucR) [Haemophilus influenzae Rd KW20]
gi|145267008|gb|EDK07018.1| L-fuculose phosphate aldolase [Haemophilus influenzae PittAA]
gi|145270839|gb|EDK10760.1| L-fuculose phosphate aldolase [Haemophilus influenzae PittII]
gi|148719146|gb|ABR00274.1| L-fucose isomerase [Haemophilus influenzae PittGG]
gi|229811505|gb|EEP47207.1| L-fucose isomerase [Haemophilus influenzae 6P18H1]
gi|260091923|gb|EEW75873.1| L-fucose operon activator [Haemophilus influenzae RdAW]
gi|301169331|emb|CBW28930.1| DNA-binding transcriptional activator [Haemophilus influenzae
10810]
gi|309751621|gb|ADO81605.1| L-fucose operon regulator [Haemophilus influenzae R2866]
gi|317433290|emb|CBY81665.1| DNA-binding transcriptional activator [Haemophilus influenzae
F3031]
gi|317449934|emb|CBY86146.1| DNA-binding transcriptional activator [Haemophilus influenzae
F3047]
gi|325560038|gb|ADZ31163.1| L-fucose operon activator [Haemophilus influenzae]
gi|325560049|gb|ADZ31171.1| L-fucose operon activator [Haemophilus influenzae]
gi|327472674|gb|EGF18103.1| L-fucose operon activator [Haemophilus aegyptius ATCC 11116]
Length = 249
Score = 35.6 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEF------------------MILLADKIANGF 47
KR+ A++A+ + + +G+ ST+ F + L N
Sbjct: 76 AKRHIAQKALDLLYENAVIGLDASSTSWYFAYLMPDIPCTVVTNSMFNINAL----VNKS 131
Query: 48 RVQVIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ I + + + PL ++ S+ ID + + ++
Sbjct: 132 NVKTIVTGGVYSAKYEAFYGPLSEYLLQRLHINFSVFSCSGIDKNGNIWESNELNASLKR 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R ++ D SK
Sbjct: 192 KMMEASERAYLLIDSSKF 209
>gi|330830321|ref|YP_004393273.1| putative HTH-type transcriptional regulator YciT [Aeromonas veronii
B565]
gi|328805457|gb|AEB50656.1| Putative HTH-type transcriptional regulator YciT [Aeromonas veronii
B565]
Length = 248
Score = 35.6 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 1 MDALQM-KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M+ + K A RA Q V DG T+ + GS A LA +A RV +I S
Sbjct: 66 MNINYLLKERLAERAAQLVEDGETVFIEGGS-ANAM---LARHLALHKRVTIITISSYIA 121
Query: 60 NFCKIHHIPLHSP 72
+ K +
Sbjct: 122 HLLKDTPAQVVLL 134
>gi|325570042|ref|ZP_08145967.1| lactose PTS family porter repressor [Enterococcus casseliflavus
ATCC 12755]
gi|325156870|gb|EGC69041.1| lactose PTS family porter repressor [Enterococcus casseliflavus
ATCC 12755]
Length = 251
Score = 35.6 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ AR A Q + +G + + G+T E + L
Sbjct: 79 KQKIARAAAQTIKNGEVIYLDAGTTTLEMIPFL 111
>gi|255022374|ref|ZP_05294360.1| DNA-binding protein IolR [Listeria monocytogenes FSL J1-208]
Length = 202
Score = 35.6 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKAAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|253574689|ref|ZP_04852029.1| regulatory protein DeoR [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845735|gb|EES73743.1| regulatory protein DeoR [Paenibacillus sp. oral taxon 786 str. D14]
Length = 257
Score = 35.6 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR+ AR A+ ++ +G L + GST +A ++ N V
Sbjct: 82 EEKRDIARLALNHIQEGDILALDGGSTTL----EIARRLENRPLTVVTNDVYIISELAAK 137
Query: 65 HHIPLHSP 72
I L P
Sbjct: 138 DQIRLVVP 145
>gi|300854759|ref|YP_003779743.1| putative DeoR family transcriptional regulator [Clostridium
ljungdahlii DSM 13528]
gi|300434874|gb|ADK14641.1| predicted transcriptional regulator, DeoR family [Clostridium
ljungdahlii DSM 13528]
Length = 253
Score = 35.6 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 26/139 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A+ A ++V DG + + +G+T L DK I ++ T + +
Sbjct: 76 KGLIAKAASRFVKDGDIIFIDSGTTTLNMGDFLKDK-----NNLTIVTNNLTFIMNCLKY 130
Query: 67 IPLHSPEDVSSVDL---SIDGFDE------IDSRLRLIKGYGGALLRE------------ 105
L+ +++ S G D + + G +L
Sbjct: 131 TNLNIISTGGTLNRETNSFSGIDSLNLLKNYNINKAFMNATGISLTNGVTNSSPLESEIK 190
Query: 106 KIIAHAASRFIVIGDESKR 124
KI +S ++ D SK
Sbjct: 191 KIAVKKSSEVFILADYSKF 209
>gi|255016697|ref|ZP_05288823.1| hypothetical protein LmonF_00471 [Listeria monocytogenes FSL
F2-515]
Length = 229
Score = 35.6 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 55 KQLIGKEAADFIEENDLIFIDSGTTTSCLAAAL 87
>gi|308189283|ref|YP_003933413.1| sorbitol utilization operon repressor [Pantoea vagans C9-1]
gi|308055898|gb|ADO08067.1| Sorbitol utilization operon repressor [Pantoea vagans C9-1]
Length = 255
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD---------------KIANGFRV 49
+ K+ A RA + +G +L GST + + LA ++
Sbjct: 76 EKKKRIAARAASLISEGDSLIFDAGSTVLQMVPHLARFNNITVMTNSLSIVNELVELDND 135
Query: 50 QVIPSSRNTEN-----FCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
QVI T F S + + DG D + +
Sbjct: 136 QVILMPGGTYRGTSASFHGSLAESAFSQFSFDMLFIGADGVDMTAG----VTTFNEVFAV 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + AA + +++ D SK
Sbjct: 192 SQAMCRAAKKIVLLVDSSKF 211
>gi|239617092|ref|YP_002940414.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
gi|239505923|gb|ACR79410.1| transcriptional regulator, DeoR family [Kosmotoga olearia TBF
19.5.1]
Length = 252
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 24/63 (38%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ A++A+ ++ + + + G+T+ L + G ++ + T
Sbjct: 76 EEKKLIAKKAMAFINNDEFIALSGGTTSYMLATELINSELQGLKIITNSINIATLILESK 135
Query: 65 HHI 67
Sbjct: 136 KDF 138
>gi|223932441|ref|ZP_03624443.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
gi|302023650|ref|ZP_07248861.1| DeoR family regulatory protein [Streptococcus suis 05HAS68]
gi|330832669|ref|YP_004401494.1| DeoR family transcriptional regulator [Streptococcus suis ST3]
gi|223898895|gb|EEF65254.1| transcriptional regulator, DeoR family [Streptococcus suis 89/1591]
gi|329306892|gb|AEB81308.1| transcriptional regulator, DeoR family [Streptococcus suis ST3]
Length = 247
Score = 35.6 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 30/165 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + D T+ + +GST + N + N
Sbjct: 72 KKRIAKEAANLIADNETIMIESGSTCALLAEEICKTKRNVTIITNSYFIANYVRQYDSCQ 131
Query: 67 I-----------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I LH VD + G D DS G L+R +++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLHKMIQFFHVDKAFVGTDGYDSEHGFT---GKNLMRSEVVQ 188
Query: 110 HAAS---RFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKE 151
+ + IV+ D SK + +FG+++ + +
Sbjct: 189 YMSDVAENMIVLTDSSKFTKRGT-------VRRFGLSQVAQVITD 226
>gi|317504074|ref|ZP_07962077.1| lactose PTS family porter repressor [Prevotella salivae DSM 15606]
gi|315664816|gb|EFV04480.1| lactose PTS family porter repressor [Prevotella salivae DSM 15606]
Length = 261
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCK 63
+ K+ A + V ++ + +G+T + LA + ++ V+ S + TE +
Sbjct: 77 EEKQQIGLEAAKLVSSNDSILLASGTT----IHALARNLHTTDKLTVVSASLQATELLAQ 132
Query: 64 IHHIPLHSPEDV---SSVDLSIDGFDEIDSRLRL---IKGYGGALLR------------- 104
++ + V SS+ + D I + G G L
Sbjct: 133 NDNVDIIQLGGVVRHSSLSVVGQYADMILNGCSFSKLYLGVDGIDLDFGISTTDMNEAEL 192
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ + A + IV+ D SK
Sbjct: 193 NRSMIRTAQKTIVLADSSKF 212
>gi|238853305|ref|ZP_04643689.1| lactose transport regulator [Lactobacillus gasseri 202-4]
gi|238834099|gb|EEQ26352.1| lactose transport regulator [Lactobacillus gasseri 202-4]
Length = 262
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+K+ ++ + + D T+ +G G+T + L K
Sbjct: 92 DLKKQIGQKLAEIIDDNSTIFLGAGTTLLYAVPYLVKK 129
>gi|197295438|ref|YP_002153979.1| DeoR family regulatory protein [Burkholderia cenocepacia J2315]
gi|195944917|emb|CAR57529.1| DeoR family regulatory protein [Burkholderia cenocepacia J2315]
Length = 256
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+ KR + A Q+V G T+ + GST + +AD
Sbjct: 79 QTEEKRRIGKLAAQFVTTGDTIFVDCGSTTPFIVDFIAD 117
>gi|183597375|ref|ZP_02958868.1| hypothetical protein PROSTU_00632 [Providencia stuartii ATCC 25827]
gi|188023402|gb|EDU61442.1| hypothetical protein PROSTU_00632 [Providencia stuartii ATCC 25827]
Length = 255
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR + A V DG + + G+T E +L ++ F + ++ + + +
Sbjct: 79 KREIGKFASSLVEDGQVVYLDAGTTTFEIARVLGER----FNLTIVTNDFSIMQYLMNKS 134
Query: 67 I 67
Sbjct: 135 Q 135
>gi|251798325|ref|YP_003013056.1| DeoR family transcriptional regulator [Paenibacillus sp. JDR-2]
gi|247545951|gb|ACT02970.1| transcriptional regulator, DeoR family [Paenibacillus sp. JDR-2]
Length = 260
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 40/142 (28%), Gaps = 23/142 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K+ R A V D + + GST + + L K N + S N +
Sbjct: 79 EEKQRVGRAAAALVEDYDVIVIDDGSTTLQMIPYLLYK-KNLTIITNSISGLNMILDYQN 137
Query: 65 HHIPLHS----------------------PEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ + V+ + D I +
Sbjct: 138 KEMFSGDVFFIGGKIDPRHYRISGSLAEKFMENFFVNKAFISIDGISPEQGITSFDSSRA 197
Query: 103 LREKIIAHAASRFIVIGDESKR 124
L + + + + I++ D SK
Sbjct: 198 LLVQTMMQKSEQSIILTDSSKF 219
>gi|172058747|ref|YP_001815207.1| DeoR family transcriptional regulator [Exiguobacterium sibiricum
255-15]
gi|171991268|gb|ACB62190.1| transcriptional regulator, DeoR family [Exiguobacterium sibiricum
255-15]
Length = 251
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 43/145 (29%), Gaps = 22/145 (15%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAK------------------EFMILLADKIANGFR 48
K A+ A++YV T+ + ST + L +
Sbjct: 76 KNRIAKHAVRYVQPDQTIILDAASTVARMTVHLPAQPIQIITNALAVVEQLEARPEIDLY 135
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKII 108
V R+ + I V V G + + + A++ +K +
Sbjct: 136 VTGGKWDRHARSLVGIKTADDILNYQVDRV---FLGACGLTEQGVFAENLEEAIV-KKAM 191
Query: 109 AHAASRFIVIGDESKRVDFLGRGML 133
+++ IV+ D +K +
Sbjct: 192 IRSSAEVIVLADHTKFEKRFLHKVC 216
>gi|257866471|ref|ZP_05646124.1| transcriptional regulator [Enterococcus casseliflavus EC30]
gi|257873014|ref|ZP_05652667.1| transcriptional regulator [Enterococcus casseliflavus EC10]
gi|257800429|gb|EEV29457.1| transcriptional regulator [Enterococcus casseliflavus EC30]
gi|257807178|gb|EEV36000.1| transcriptional regulator [Enterococcus casseliflavus EC10]
Length = 250
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGST 31
Q K A A + V DG + + +GST
Sbjct: 82 QEKEAIATLAAELVHDGDVIYLDSGST 108
>gi|157377612|ref|YP_001476212.1| DeoR family transcriptional regulator [Shewanella sediminis
HAW-EB3]
gi|157319986|gb|ABV39084.1| transcriptional regulator, DeoR family [Shewanella sediminis
HAW-EB3]
Length = 256
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 28/140 (20%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN--------- 57
K + A+ A + + D + + +GST + L NG V
Sbjct: 78 KLSIAQAAAKLINDHNRIIIDSGSTTSGLVREL--NGKNGLVVMTNSLQLANAIHELENE 135
Query: 58 -------------TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+E+F + + + + DG D + G +
Sbjct: 136 PTLLMTGGTWDPHSESFQGQIAEQVLRSYNFDQLFIGADGIDLERGTTTFNELTGLS--- 192
Query: 105 EKIIAHAASRFIVIGDESKR 124
K++A + +V+ + K
Sbjct: 193 -KVMAEVSREVVVMLESEKL 211
>gi|270291438|ref|ZP_06197660.1| lactose transport regulator [Pediococcus acidilactici 7_4]
gi|270280284|gb|EFA26120.1| lactose transport regulator [Pediococcus acidilactici 7_4]
Length = 176
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
M+ L+ K +RA + V D + + G++ + LA+
Sbjct: 1 MNLLE-KNEIGKRAAELVQDNEVIFLDAGTSTASMIAYLAEL 41
>gi|226328423|ref|ZP_03803941.1| hypothetical protein PROPEN_02317 [Proteus penneri ATCC 35198]
gi|225203156|gb|EEG85510.1| hypothetical protein PROPEN_02317 [Proteus penneri ATCC 35198]
Length = 259
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A + DG T+ + +G+T +A + + V V+
Sbjct: 80 KTLIGKAAATLIKDGDTVILDSGTTT----REIATHLKSRENVVVMT 122
>gi|113461589|ref|YP_719658.1| L-fucose operon activator [Haemophilus somnus 129PT]
gi|112823632|gb|ABI25721.1| L-fucose operon activator [Haemophilus somnus 129PT]
Length = 250
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD--------------KIANGFRVQ 50
KR A AI+Y+ +G+ LG+ ST+ F ++ D + N ++
Sbjct: 75 DKKRAIAASAIEYMFEGIVLGLDASSTSWHFAQMIPDIPCTVVTNSMHNITALVNKPNIK 134
Query: 51 VIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I + + PL +D+ I IDS +++ ++ +
Sbjct: 135 TIATGGVYSVKYDAFYGPLSEQLLQRLHIDIGIFSCTGIDSSGGVLESNELNASIKRKLM 194
Query: 110 HAASRFIVIGDESKR 124
A + ++ D SK
Sbjct: 195 DACEQKFLLLDSSKF 209
>gi|10957464|ref|NP_051611.1| glycerol-3-phosphate regulon repressor [Deinococcus radiodurans R1]
gi|6460893|gb|AAF12597.1|AE001826_66 glycerol-3-phosphate regulon repressor [Deinococcus radiodurans R1]
Length = 272
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------IANGFRVQVIPSSR- 56
K+ A RA++ + G TL + G+TA L + +G V + +
Sbjct: 87 KQRLAGRALELIAPGQTLYLDAGTTALALAEALQRTPQLTRTLRVVTHGIDVAYVLNGEC 146
Query: 57 -----------NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+T + + S + L ID RL ++
Sbjct: 147 ALYVVGGEVYGSTYSLTGPDALSTVSRYNYD---LFFVSCTSIDPAGRLTNSNSVEAQQK 203
Query: 106 KIIAHAASRFIVIGDESKR 124
I + R ++I D+SK
Sbjct: 204 ASILRQSRRSVLIADQSKW 222
>gi|257065592|ref|YP_003151848.1| transcriptional regulator, DeoR family [Anaerococcus prevotii DSM
20548]
gi|256797472|gb|ACV28127.1| transcriptional regulator, DeoR family [Anaerococcus prevotii DSM
20548]
Length = 249
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A++ + DG T+ +G GST + L
Sbjct: 80 KLIIAKKVADLIEDGDTVFIGPGSTLELVANYL 112
>gi|329930434|ref|ZP_08283974.1| transcriptional regulator, DeoR family [Paenibacillus sp. HGF5]
gi|328934812|gb|EGG31302.1| transcriptional regulator, DeoR family [Paenibacillus sp. HGF5]
Length = 249
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 26/139 (18%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
Q K AR A V DG ++ + G+T + + + V V+ + +
Sbjct: 77 QQKNAVARLAAAQVEDGESIYLDAGTTTLAMIPFI-----DAKDVTVVTNGLSHIEALVS 131
Query: 65 HHIPLHSPEDVSSVD-------LSIDGFDEIDSRLRLIKGYG-------------GALLR 104
I + + + +++ D + G AL++
Sbjct: 132 KRIKSYLLGGMMKIHTKAVIGSIALQNMDNFRFDRCFLGTNGVDAEMGYTTPDPEEALIK 191
Query: 105 EKIIAHAASRFIVIGDESK 123
+ +AS ++ + D SK
Sbjct: 192 RRAHQLSASSYV-LADSSK 209
>gi|323695062|ref|ZP_08109205.1| hypothetical protein HMPREF9475_04069 [Clostridium symbiosum
WAL-14673]
gi|323500864|gb|EGB16783.1| hypothetical protein HMPREF9475_04069 [Clostridium symbiosum
WAL-14673]
Length = 262
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
D + KR AR A + + DG ++ + G+T + + DK
Sbjct: 77 DNMAEKRAIARLAAEQIEDGDSIFVDAGTTTGNLVEFIKDK 117
>gi|299138710|ref|ZP_07031888.1| transcriptional regulator, DeoR family [Acidobacterium sp.
MP5ACTX8]
gi|298599346|gb|EFI55506.1| transcriptional regulator, DeoR family [Acidobacterium sp.
MP5ACTX8]
Length = 266
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
L+ K+ A A++ V +G + + +G+T L
Sbjct: 89 QLKEKQRIAEAAVKLVEEGHCVLLDSGTTTTAIARAL 125
>gi|251793492|ref|YP_003008221.1| glucitol operon repressor [Aggregatibacter aphrophilus NJ8700]
gi|247534888|gb|ACS98134.1| glucitol operon repressor [Aggregatibacter aphrophilus NJ8700]
Length = 258
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K A+RA + ++D + + +G+T + L K
Sbjct: 82 ERKLAIAKRAAERILDHNRIIIDSGTTTAALIKQLNHK 119
>gi|160936553|ref|ZP_02083920.1| hypothetical protein CLOBOL_01443 [Clostridium bolteae ATCC
BAA-613]
gi|158440344|gb|EDP18089.1| hypothetical protein CLOBOL_01443 [Clostridium bolteae ATCC
BAA-613]
Length = 249
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 24/152 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++K+ A +A+ ++ + + GS+ A I NG ++ V+ +S + + C +
Sbjct: 75 ELKQRLALKALDFLEKDQLVAID-GSSTNL---QFAKNIPNGLKLTVLTNSYSIAHACSM 130
Query: 65 HHIPLH----------SPEDVS----------SVDLSIDGFDEIDSRLRLIKGYGGALLR 104
S +V DL G I + Y +
Sbjct: 131 KDQVDVIVLGGRLLKESMTNVGETAASQAALYHPDLCFMGVYAIHPEYGMTIPYPDEVSI 190
Query: 105 EKIIAHAASRFIVIGDESKRVDFLGRGMLPIE 136
++ + ++ R I + + K + IE
Sbjct: 191 KRQLIQSSRRVIALVNPIKLNTVSRYHVCGIE 222
>gi|290580672|ref|YP_003485064.1| putative transcriptional regulator [Streptococcus mutans NN2025]
gi|254997571|dbj|BAH88172.1| putative transcriptional regulator [Streptococcus mutans NN2025]
Length = 250
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
Q K+ +RA + + +G + + G+T + L
Sbjct: 80 QAKKAIVKRAAELIDNGDVIFVDAGTTTALLLDQL 114
>gi|333006641|gb|EGK26140.1| deoR-like helix-turn-helix domain protein [Shigella flexneri VA-6]
Length = 252
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 35/139 (25%), Gaps = 22/139 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI---------------ANGFRV 49
+ KR AA+ A V TL G+T + + ++I
Sbjct: 77 EEKRRAAKLAATLVEPDQTLFFDCGTTTPWLIEAIDNEIPFTAVCYSLNTFLALKEKPHC 136
Query: 50 QVIPSS---RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + K + + + L K
Sbjct: 137 RAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSKGATC---FNLEELPVK 193
Query: 107 IIA-HAASRFIVIGDESKR 124
A A + +++ D SK
Sbjct: 194 HWAMSMAQKHVLVVDHSKF 212
>gi|299535299|ref|ZP_07048622.1| putative HTH-type transcriptional regulator [Lysinibacillus
fusiformis ZC1]
gi|298729281|gb|EFI69833.1| putative HTH-type transcriptional regulator [Lysinibacillus
fusiformis ZC1]
Length = 261
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
M KR AR A + + DG T+ + TG+T L
Sbjct: 76 MHKD-AKRQIARIAAKRICDGDTIAVDTGTTTVHIADFL 113
>gi|146320555|ref|YP_001200266.1| sugar metabolism transcriptional regulator [Streptococcus suis
98HAH33]
gi|145691361|gb|ABP91866.1| Transcriptional regulator of sugar metabolism [Streptococcus suis
98HAH33]
Length = 247
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 30/165 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + D T+ + +GST + N + N
Sbjct: 72 KKRIAKEAANLIADNETIMIESGSTCALLAEEICKTKRNVTIITNSYFIANYVRQYDSCQ 131
Query: 67 I-----------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I LH VD + G D DS G L+R +++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLHKMIQFFHVDKAFVGTDGYDSEHGFT---GKNLMRSEVVQ 188
Query: 110 HAAS---RFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKE 151
+ + IV+ D SK + +FG+++ + +
Sbjct: 189 YMSDVAENMIVLTDSSKFTKRGT-------VRRFGLSQVAQVITD 226
>gi|21666492|gb|AAM73725.1|AF395874_2 putative protein [Streptococcus mutans]
Length = 250
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
Q K+ +RA + + +G + + G+T + L
Sbjct: 80 QAKKAIVKRAAELIDNGDVIFVDAGTTTALLLDQL 114
>gi|297162322|gb|ADI12034.1| DeoR family transcriptional regulator [Streptomyces bingchenggensis
BCW-1]
Length = 258
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS 54
+ K+ AR A + + G T+ + GST LA ++ + V +
Sbjct: 79 EAKQAIARWAAERIRTGETVLLDAGSTVG----ALAHELRAAEDLTVATT 124
>gi|255028705|ref|ZP_05300656.1| DeoR family transcriptional regulator [Listeria monocytogenes
LO28]
Length = 229
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 55 KQLIGKEAADFIEENDLIFIDSGTTTSCLAAAL 87
>gi|228989726|ref|ZP_04149708.1| Transcriptional regulator, DeoR [Bacillus pseudomycoides DSM 12442]
gi|228770060|gb|EEM18642.1| Transcriptional regulator, DeoR [Bacillus pseudomycoides DSM 12442]
Length = 239
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 44/142 (30%), Gaps = 22/142 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A + V + + + G+T + + + DK IP+ +
Sbjct: 57 EEKRKIAMEASKLVENNDIIAIEIGTTTMQVLDFIHDKKNLTILTNSIPAVNKVIELKEQ 116
Query: 65 HH----------------------IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL 102
+ + + D +V+ D + L Y
Sbjct: 117 YDSFDCKLIVFGGMLNSNSLALSGDMMLNYLDHFTVNKLFASCDGVSLEKELTCSYIEDA 176
Query: 103 LREKIIAHAASRFIVIGDESKR 124
+ + A + +++ DESK
Sbjct: 177 QVFQQLKKNAKQVVMMIDESKF 198
>gi|169350094|ref|ZP_02867032.1| hypothetical protein CLOSPI_00836 [Clostridium spiroforme DSM 1552]
gi|169293307|gb|EDS75440.1| hypothetical protein CLOSPI_00836 [Clostridium spiroforme DSM 1552]
Length = 253
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
KR A++A++ + G + +G ST + L + +I + +
Sbjct: 79 KRIIAKKAVELIEPGTMVFLGI-STINLEIAKLI--YQKNLNITLITNMIDIMKLFTN 133
>gi|254362613|ref|ZP_04978705.1| DeoR family transcriptional regulator [Mannheimia haemolytica
PHL213]
gi|153094225|gb|EDN75101.1| DeoR family transcriptional regulator [Mannheimia haemolytica
PHL213]
Length = 178
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 23/136 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI-----------ANGFRVQVIPS- 54
K+ A+ A + D + + +GST + L ++ P+
Sbjct: 4 KKMIAQAARDCIRDHNRIIIDSGSTTGALVKALNQTGLVVMTNSLNLATELTSLECEPTV 63
Query: 55 -------SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
+E+F + D + + DG D + G + +
Sbjct: 64 LMTGGTWDSRSESFQGKVAEQVLRSYDFDQLFIGADGLDLARGTTTFNELVGLSQV---- 119
Query: 108 IAHAASRFIVIGDESK 123
+A + IV+ + K
Sbjct: 120 MAEVSREVIVLIESQK 135
>gi|149926415|ref|ZP_01914676.1| Alcohol dehydrogenase [Limnobacter sp. MED105]
gi|149824778|gb|EDM83992.1| Alcohol dehydrogenase [Limnobacter sp. MED105]
Length = 369
Score = 35.6 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 14 AIQYVVDGMTLGMGTGST--AKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHIPLHS 71
A+ + + + +G GST + + +LA + + + + + +
Sbjct: 69 AVDF-KADVVVAIGGGSTLDVAKLIAVLARGKQELKTMYGVGNVSSDRLPLVLVPTTAGT 127
Query: 72 PEDVSSVDLSIDGFD 86
+V+ + + G D
Sbjct: 128 GSEVTPISIVTTGVD 142
>gi|260583853|ref|ZP_05851601.1| transcriptional regulator, DeoR family [Granulicatella elegans ATCC
700633]
gi|260158479|gb|EEW93547.1| transcriptional regulator, DeoR family [Granulicatella elegans ATCC
700633]
Length = 255
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
K+N ARRA V + + + +GSTA + LAD
Sbjct: 82 KKNIARRASGLVREHDMVFINSGSTAFLLLNYLAD 116
>gi|197285988|ref|YP_002151860.1| aga operon transcriptional repressor [Proteus mirabilis HI4320]
gi|227356497|ref|ZP_03840884.1| aga operon transcriptional repressor (DeoR-family transcriptional
regulator) [Proteus mirabilis ATCC 29906]
gi|194683475|emb|CAR44271.1| putative aga operon transcriptional repressor (DeoR-family
transcriptional regulator) [Proteus mirabilis HI4320]
gi|227163253|gb|EEI48180.1| aga operon transcriptional repressor (DeoR-family transcriptional
regulator) [Proteus mirabilis ATCC 29906]
Length = 259
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A + DG T+ + +G+T +A + + V V+
Sbjct: 80 KTLIGKAAATLIKDGDTVILDSGTTT----REIATHLKSRENVVVMT 122
>gi|15889977|ref|NP_355658.1| DeoR family transcriptional regulator [Agrobacterium tumefaciens
str. C58]
gi|15157940|gb|AAK88443.1| transcriptional regulator, DeoR family [Agrobacterium tumefaciens
str. C58]
Length = 266
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
K AR + + GM + + GST + A I G + V+ ++
Sbjct: 80 KATLARAVVPLIEPGMVVFIDAGST-NLAI---ARAIPAGLNLTVVTNTPA 126
>gi|289566772|ref|ZP_06447185.1| LOW QUALITY PROTEIN: regulatory protein [Enterococcus faecium
D344SRF]
gi|289161449|gb|EFD09336.1| LOW QUALITY PROTEIN: regulatory protein [Enterococcus faecium
D344SRF]
Length = 190
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENF 61
A K+ A A + +G T+ +G G+T + LLA + N ++++I ++ +
Sbjct: 4 SADSRKKEIAATAASLIHEGETIFLGPGTT----IELLATHLLNK-KIRIITNNYPVFDI 58
Query: 62 CKIHHIPLHSP 72
P
Sbjct: 59 LAQADGPEILL 69
>gi|227893096|ref|ZP_04010901.1| DeoR family transcriptional regulator [Lactobacillus ultunensis DSM
16047]
gi|227865074|gb|EEJ72495.1| DeoR family transcriptional regulator [Lactobacillus ultunensis DSM
16047]
Length = 248
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A+ A + V DG T+ + +GS F L +G RV +I
Sbjct: 73 KVKIAQEAAKLVNDGDTIMIESGSACALFAEELG---KSGKRVTIIT 116
>gi|89055084|ref|YP_510535.1| DeoR family transcriptional regulator [Jannaschia sp. CCS1]
gi|88864633|gb|ABD55510.1| transcriptional regulator, DeoR family [Jannaschia sp. CCS1]
Length = 278
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ AR A++ DG + + G+T + + LA + F + ++
Sbjct: 95 KQAIARAAVELCDDGDAIIINGGTTTFQMVHPLAMRRMQIFTNSFPIAEHLLKHSKNTIM 154
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA---------------LLREKIIAHA 111
+ ++ LS D + + + GA + E+ +
Sbjct: 155 LSGGVIYREQNIILSPFDND-VTRNFAATRMFMGAQGLGPLGLMEADPMLIQAEQKLIGQ 213
Query: 112 ASRFIVIGDESKRVDFLGRGMLPI 135
A +V+ D SK + + P+
Sbjct: 214 ADELVVLVDSSKFENRSSLVLCPL 237
>gi|325294098|ref|YP_004279962.1| DeoR family transcriptional regulator [Agrobacterium sp. H13-3]
gi|325061951|gb|ADY65642.1| transcriptional regulator, DeoR family [Agrobacterium sp. H13-3]
Length = 266
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 40/138 (28%), Gaps = 24/138 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFC--- 62
K + AR AI + GM + + GST + A I G + V+ +
Sbjct: 80 KASLARAAIPLLEPGMVVFIDAGST-NLAI---ARAIPAGLTLTVVTNTPAIAAELTGRA 135
Query: 63 ----------------KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
++ +L I G + + L + ++
Sbjct: 136 DIALIVIGGKVDPAVGAAIDAMALRQLELMRPELCILGVCGVAAENGLSADIFEDAVFKR 195
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R + K
Sbjct: 196 LACSASQRIVAAITTEKL 213
>gi|270339878|ref|ZP_06006323.2| DeoR family transcriptional regulator [Prevotella bergensis DSM
17361]
gi|270333406|gb|EFA44192.1| DeoR family transcriptional regulator [Prevotella bergensis DSM
17361]
Length = 182
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 42/138 (30%), Gaps = 18/138 (13%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA-----------------NG 46
++ K A + + ++ + +G+T F + K +G
Sbjct: 1 MEEKHRIGMEAAKLIEYNDSIIIASGTTIHAFSKCIKPKHRLMVVSAALPASIDLSQIDG 60
Query: 47 FRVQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V + + + + D S G D ID + L +
Sbjct: 61 IDVVQLGGNLRQSSLSVVGQYSESLLYDT-SFSKLFLGVDGIDFDYGISTTDLNEALLNR 119
Query: 107 IIAHAASRFIVIGDESKR 124
+ AA R IV+ D SK
Sbjct: 120 QMIEAAQRTIVLADSSKF 137
>gi|229162651|ref|ZP_04290610.1| Fructose repressor [Bacillus cereus R309803]
gi|228620823|gb|EEK77690.1| Fructose repressor [Bacillus cereus R309803]
Length = 269
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 96 QIKQQIAKYAASIVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 155
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 156 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 214
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 215 TLANEGYFLIDESKFSEVAFAKIANVE 241
>gi|119776772|ref|YP_929512.1| DeoR family transcriptional regulator [Shewanella amazonensis SB2B]
gi|119769272|gb|ABM01843.1| transcriptional regulator, DeoR family [Shewanella amazonensis
SB2B]
Length = 254
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K A+ A + + D + + GST + LA + +AN
Sbjct: 77 KLAIAKEAAKLIRDHNRIIIDYGSTTLGLIPELAHRRGLVVMTNSLQLANAIHELEQEPT 136
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + + D + + DG D + G + +
Sbjct: 137 LLMTGGTWDPHSESFQGLVAEQVLRSYDFDQLFIGADGIDLSRGTTTFNELVGLS----R 192
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A + IV+ + K + LP
Sbjct: 193 VMAEVSREVIVMLESDKIGRRIPNLELP 220
>gi|227486267|ref|ZP_03916583.1| DeoR family transcriptional regulator [Anaerococcus lactolyticus
ATCC 51172]
gi|227235678|gb|EEI85693.1| DeoR family transcriptional regulator [Anaerococcus lactolyticus
ATCC 51172]
Length = 231
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 27/144 (18%)
Query: 2 DALQM---KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNT 58
+ M K ++A + + D + + GST E + L+ + + V+ +
Sbjct: 71 NQKTMLQEKSLIGQKAARLIKDAKFIYLDAGSTCNELIDYLS----SDQDITVVTNGLMH 126
Query: 59 ENFCKIHHIPLHSPE-DVSS------------------VDLSIDGFDEIDSRLRLIKGYG 99
+ +IP E +V DL+ G + D R
Sbjct: 127 LDKLINKNIPTILLEGEVKPATKVTTGSKTLEAIARYNFDLAFIGANGFDKRGFYTADVN 186
Query: 100 GALLREKIIAHAASRFIVIGDESK 123
A+++ K I ++R V+ D SK
Sbjct: 187 EAVVKSKAIE-NSTRAYVLADSSK 209
>gi|76574900|gb|ABA47370.1| lactose phosphotransferase system repressor [Lactococcus lactis]
Length = 255
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T + + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLVQLALEL--KGRKGYKIRVIT 124
>gi|24379324|ref|NP_721279.1| putative transcriptional regulator of sugar metabolism
[Streptococcus mutans UA159]
gi|24377247|gb|AAN58585.1|AE014928_6 putative transcriptional regulator of sugar metabolism
[Streptococcus mutans UA159]
gi|93277285|tpg|DAA01812.1| TPA_exp: FruR [Streptococcus mutans UA159]
Length = 265
Score = 35.6 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
Q K+ +RA + + +G + + G+T + L
Sbjct: 95 QAKKAIVKRAAELIDNGDVIFVDAGTTTALLLDQL 129
>gi|261867381|ref|YP_003255303.1| glucitol operon repressor [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293390875|ref|ZP_06635209.1| glucitol operon repressor [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|261412713|gb|ACX82084.1| glucitol operon repressor [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|290951409|gb|EFE01528.1| glucitol operon repressor [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 265
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K A+ A + + D + + +G+T + L K
Sbjct: 89 ERKLAIAKVAAERIRDHNRIIIDSGTTTAALIKQLNHK 126
>gi|126649805|ref|ZP_01722041.1| transcription repressor of myo-inositol catabolism operon [Bacillus
sp. B14905]
gi|126593524|gb|EAZ87469.1| transcription repressor of myo-inositol catabolism operon [Bacillus
sp. B14905]
Length = 255
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 15/149 (10%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN--------------GFR 48
L K A+ + V DG + + +G+T + L DK G
Sbjct: 71 QLTEKIAIAKASASLVQDGECIFIDSGTTTYQMTPFLLDKEKLTVVTNSLPVAFNLIGSN 130
Query: 49 VQVIPSSRNTENFCKIHHIPLHSPE-DVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
++VI + K + +++ + + + + K
Sbjct: 131 IEVILLGGKVRHSEKSVTSNEFLFHFEHLNINKAFICASGVSLEKGISDFNLEEAITRKK 190
Query: 108 IAHAASRFIVIGDESKRVDFLGRGMLPIE 136
I + V+ D SK + + P+E
Sbjct: 191 IISISQTVYVVTDSSKFNKDVAIQVCPLE 219
>gi|170747898|ref|YP_001754158.1| malonyl-CoA synthase [Methylobacterium radiotolerans JCM 2831]
gi|170654420|gb|ACB23475.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
Length = 509
Score = 35.2 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Query: 191 PQIISGELCNIPGVIEH---GL----FINMVDCAIIGTS 222
P+ + E+ +PGV+E GL F V ++G +
Sbjct: 417 PKEVETEIDALPGVVESAVIGLAHPDFGEAVTAVVVGGA 455
>gi|258507403|ref|YP_003170154.1| lactose phosphotransferase system repressor [Lactobacillus
rhamnosus GG]
gi|257147330|emb|CAR86303.1| Lactose phosphotransferase system repressor [Lactobacillus
rhamnosus GG]
gi|259648759|dbj|BAI40921.1| transcriptional regulator [Lactobacillus rhamnosus GG]
Length = 252
Score = 35.2 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ K R+ ++ T+ +G G+T + L
Sbjct: 72 QREAKLEIGRQIAAFITPKATVYLGAGTTVNAAISFL 108
>gi|146318360|ref|YP_001198072.1| sugar metabolism transcriptional regulator [Streptococcus suis
05ZYH33]
gi|253751510|ref|YP_003024651.1| DeoR family regulatory protein [Streptococcus suis SC84]
gi|253753411|ref|YP_003026552.1| DeoR family transcriptional regulator [Streptococcus suis P1/7]
gi|145689166|gb|ABP89672.1| Transcriptional regulator of sugar metabolism [Streptococcus suis
05ZYH33]
gi|251815799|emb|CAZ51406.1| DeoR family regulatory protein [Streptococcus suis SC84]
gi|251819657|emb|CAR45424.1| DeoR family regulatory protein [Streptococcus suis P1/7]
gi|292558153|gb|ADE31154.1| regulatory protein, DeoR [Streptococcus suis GZ1]
gi|319757939|gb|ADV69881.1| sugar metabolism transcriptional regulator [Streptococcus suis
JS14]
Length = 247
Score = 35.2 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 30/165 (18%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+ A + D T+ + +GST + N + N
Sbjct: 72 KKRIAKEAANLIADNETIMIESGSTCALLAEEICKTKRNVTIITNSYFIANYVRQYDSCQ 131
Query: 67 I-----------------PLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I LH VD + G D DS G L+R +++
Sbjct: 132 IILLGGEFQKDSQVTVGPLLHKMIQFFHVDKAFVGTDGYDSEHGFT---GKNLMRSEVVQ 188
Query: 110 HAAS---RFIVIGDESKRVDFLGRGMLPIEIDQFGVNKTLSALKE 151
+ + IV+ D SK + +FG+++ + +
Sbjct: 189 YMSDVAENMIVLTDSSKFTKRGT-------VRRFGLSQVAQVITD 226
>gi|28212200|ref|NP_783144.1| glucosamine-6-phosphate deaminase [Clostridium tetani E88]
gi|31076802|sp|Q890L6|NAGB_CLOTE RecName: Full=Glucosamine-6-phosphate deaminase; AltName:
Full=GlcN6P deaminase; Short=GNPDA; AltName:
Full=Glucosamine-6-phosphate isomerase
gi|28204644|gb|AAO37081.1| glucosamine-6-phosphate isomerase [Clostridium tetani E88]
Length = 241
Score = 35.2 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 2 DALQMKRNAARRAIQYV--VDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
+ ++ AA ++ + LG+ TGST L + G +S N +
Sbjct: 8 NYDELSEVAALEILELIDKKPDCVLGLATGSTPVGTYQKLIEYYKKGKVDFSKVTSFNLD 67
Query: 60 NFCKIHHIPLHSPE 73
+ ++ S +
Sbjct: 68 EYRGLNGEHPQSYK 81
>gi|157155465|ref|YP_001462036.1| DNA-binding transcriptional repressor DeoR [Escherichia coli
E24377A]
gi|191166147|ref|ZP_03027981.1| deoxyribose operon repressor [Escherichia coli B7A]
gi|193064472|ref|ZP_03045553.1| deoxyribose operon repressor [Escherichia coli E22]
gi|194428170|ref|ZP_03060713.1| deoxyribose operon repressor [Escherichia coli B171]
gi|218694314|ref|YP_002401981.1| DNA-binding transcriptional repressor DeoR [Escherichia coli 55989]
gi|256021089|ref|ZP_05434954.1| DNA-binding transcriptional repressor DeoR [Shigella sp. D9]
gi|260843091|ref|YP_003220869.1| DNA-binding transcriptional repressor DeoR [Escherichia coli
O103:H2 str. 12009]
gi|260854132|ref|YP_003228023.1| DNA-binding transcriptional repressor DeoR [Escherichia coli
O26:H11 str. 11368]
gi|260867014|ref|YP_003233416.1| DNA-binding transcriptional repressor DeoR [Escherichia coli
O111:H- str. 11128]
gi|300823981|ref|ZP_07104103.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300924448|ref|ZP_07140418.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|301325848|ref|ZP_07219281.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|307314523|ref|ZP_07594126.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|309795412|ref|ZP_07689830.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|331676579|ref|ZP_08377275.1| deoxyribose operon repressor [Escherichia coli H591]
gi|332282313|ref|ZP_08394726.1| deoxyribose operon repressor [Shigella sp. D9]
gi|157077495|gb|ABV17203.1| deoxyribose operon repressor [Escherichia coli E24377A]
gi|190903756|gb|EDV63471.1| deoxyribose operon repressor [Escherichia coli B7A]
gi|192928934|gb|EDV82547.1| deoxyribose operon repressor [Escherichia coli E22]
gi|194413730|gb|EDX30009.1| deoxyribose operon repressor [Escherichia coli B171]
gi|218351046|emb|CAU96750.1| DNA-binding transcriptional repressor [Escherichia coli 55989]
gi|257752781|dbj|BAI24283.1| DNA-binding transcriptional repressor DeoR [Escherichia coli
O26:H11 str. 11368]
gi|257758238|dbj|BAI29735.1| DNA-binding transcriptional repressor DeoR [Escherichia coli
O103:H2 str. 12009]
gi|257763370|dbj|BAI34865.1| DNA-binding transcriptional repressor DeoR [Escherichia coli
O111:H- str. 11128]
gi|300419333|gb|EFK02644.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300523492|gb|EFK44561.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300847362|gb|EFK75122.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|306905946|gb|EFN36468.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|308121062|gb|EFO58324.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|315060078|gb|ADT74405.1| DNA-binding transcriptional repressor [Escherichia coli W]
gi|320199031|gb|EFW73628.1| Deoxyribose operon repressor, DeoR family [Escherichia coli
EC4100B]
gi|323155788|gb|EFZ41957.1| deoR-like helix-turn-helix domain protein [Escherichia coli
EPECa14]
gi|323159662|gb|EFZ45641.1| deoR-like helix-turn-helix domain protein [Escherichia coli
E128010]
gi|323175539|gb|EFZ61134.1| deoR-like helix-turn-helix domain protein [Escherichia coli 1180]
gi|323379364|gb|ADX51632.1| transcriptional regulator, DeoR family [Escherichia coli KO11]
gi|323947136|gb|EGB43147.1| deoR family protein Bacterial regulatory protein [Escherichia coli
H120]
gi|324116153|gb|EGC10076.1| deoR family protein regulatory protein [Escherichia coli E1167]
gi|331075268|gb|EGI46566.1| deoxyribose operon repressor [Escherichia coli H591]
gi|332104665|gb|EGJ08011.1| deoxyribose operon repressor [Shigella sp. D9]
Length = 252
Score = 35.2 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 35/139 (25%), Gaps = 22/139 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI---------------ANGFRV 49
+ KR AA+ A V TL G+T + + ++I
Sbjct: 77 EEKRRAAKMAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHC 136
Query: 50 QVIPSS---RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ + K + + + L K
Sbjct: 137 RAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSKGATC---FNLEELPVK 193
Query: 107 IIA-HAASRFIVIGDESKR 124
A A + +++ D SK
Sbjct: 194 HWAMSMAQKHVLVVDHSKF 212
>gi|323485450|ref|ZP_08090798.1| hypothetical protein HMPREF9474_02549 [Clostridium symbiosum
WAL-14163]
gi|323401313|gb|EGA93663.1| hypothetical protein HMPREF9474_02549 [Clostridium symbiosum
WAL-14163]
Length = 262
Score = 35.2 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
D + KR AR A + + DG ++ + G+T + + DK
Sbjct: 77 DNMAEKRAIARLAAEQIEDGDSIFVDAGTTTGSLVEFIKDK 117
>gi|255025364|ref|ZP_05297350.1| hypothetical protein LmonocytFSL_01844 [Listeria monocytogenes
FSL J2-003]
Length = 229
Score = 35.2 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 55 KQLIGKEAADFIEENDLIFIDSGTTTSCLAAAL 87
>gi|146310989|ref|YP_001176063.1| DNA-binding transcriptional repressor DeoR [Enterobacter sp. 638]
gi|145317865|gb|ABP60012.1| transcriptional regulator, DeoR family [Enterobacter sp. 638]
Length = 252
Score = 35.2 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR AAR+A V TL G+T + +
Sbjct: 77 EEKRKAARQAASLVQPHQTLFFDCGTTTPWIIEAI 111
>gi|229031343|ref|ZP_04187347.1| Fructose repressor [Bacillus cereus AH1271]
gi|228729973|gb|EEL80949.1| Fructose repressor [Bacillus cereus AH1271]
Length = 271
Score = 35.2 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 98 QIKQQIAKYAASIVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 157
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 158 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 216
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 217 TLANEGYFLIDESKFSEVAFAKIANVE 243
>gi|77465737|ref|YP_355240.1| DeoR family transcriptional regulator [Rhodobacter sphaeroides
2.4.1]
gi|77390155|gb|ABA81339.1| transcriptional regulator, DeoR family [Rhodobacter sphaeroides
2.4.1]
Length = 254
Score = 35.2 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A RA + G T+ + G+T LA ++ RV V+
Sbjct: 95 AKEALAVRAAALIEPGDTVFLDCGTTTPY----LAARVPQNARVTVVT 138
>gi|125936|sp|P18816|LACR_LACLA RecName: Full=Lactose phosphotransferase system repressor
gi|149403|gb|AAA25175.1| lactose repressor (lacR; alt.) [Lactococcus lactis]
Length = 255
Score = 35.2 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T + + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLVQLALEL--KGRKGYKIRVIT 124
>gi|127513342|ref|YP_001094539.1| ATP-NAD/AcoX kinase [Shewanella loihica PV-4]
gi|126638637|gb|ABO24280.1| ATP-NAD/AcoX kinase [Shewanella loihica PV-4]
Length = 388
Score = 35.2 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 10 AARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
A AI+ + DG+ + MG+GST M L
Sbjct: 222 IAAEAIEQIDDGLAI-MGSGSTVAAVMEELG 251
>gi|293401843|ref|ZP_06645984.1| lactose phosphotransferase system repressor [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304795|gb|EFE46043.1| lactose phosphotransferase system repressor [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 249
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
+ KR A+ A + + + GST + +K A
Sbjct: 79 EEKRRLAQYAATLIEPHDFIYLDAGSTILHMAEFIEEKDA 118
>gi|254721143|ref|ZP_05182934.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. A1055]
Length = 248
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 75 QIKQQIAKYAASVVEQGDFIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 134
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 135 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 193
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 194 TLANEGYFLIDESKFSEVAFAKIANVE 220
>gi|224502324|ref|ZP_03670631.1| DeoR family transcriptional regulator [Listeria monocytogenes FSL
R2-561]
Length = 253
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKEAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|149402|gb|AAA25174.1| lactose repressor (lacR; alt.) [Lactococcus lactis]
gi|149405|gb|AAA25176.1| repressor protein [Lactococcus lactis]
gi|149416|gb|AAA25186.1| lacR [Lactococcus lactis]
Length = 261
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T + + L K G++++VI
Sbjct: 86 KIDIAKKACSLIKDGDTIFIGPGTTLVQLALEL--KGRKGYKIRVIT 130
>gi|116326616|ref|YP_796536.1| lactose transport regulator [Lactococcus lactis subsp. cremoris
SK11]
gi|116108984|gb|ABJ74105.1| lactose transport regulator [Lactococcus lactis subsp. cremoris
SK11]
Length = 255
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K + A++A + DG T+ +G G+T + + L K G++++VI
Sbjct: 80 KIDIAKKACSLIKDGDTIFIGPGTTLVQLALEL--KGRKGYKIRVIT 124
>gi|332560489|ref|ZP_08414807.1| DeoR family transcriptional regulator [Rhodobacter sphaeroides
WS8N]
gi|332274287|gb|EGJ19603.1| DeoR family transcriptional regulator [Rhodobacter sphaeroides
WS8N]
Length = 239
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A RA + G T+ + G+T LA ++ RV V+
Sbjct: 80 AKEALAVRAAALIEPGDTVFLDCGTTTPY----LAARVPQNARVTVVT 123
>gi|316935445|ref|YP_004110427.1| DeoR family transcriptional regulator [Rhodopseudomonas palustris
DX-1]
gi|315603159|gb|ADU45694.1| transcriptional regulator, DeoR family [Rhodopseudomonas palustris
DX-1]
Length = 266
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 5 QMKRNAARRAIQYVVDG--MTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
+ K++ A +YV DG M+LG+GT T++ L +P
Sbjct: 86 EAKQSIAAAVARYVNDGDSMSLGIGT--TSQFVAEALLSHRRLKIVTNNLP 134
>gi|300811958|ref|ZP_07092418.1| transcriptional regulator, DeoR family [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300497075|gb|EFK32137.1| transcriptional regulator, DeoR family [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 255
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
Q K+ A+ A V D T+ +G G+T + + L
Sbjct: 78 QEKQEIAKVAASLVNDNETIYVGPGTTLEFMVARL 112
>gi|182419299|ref|ZP_02950552.1| putative transcriptional regulator, DeoR family [Clostridium
butyricum 5521]
gi|237668313|ref|ZP_04528297.1| transcriptional regulator, DeoR family [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182376939|gb|EDT74510.1| putative transcriptional regulator, DeoR family [Clostridium
butyricum 5521]
gi|237656661|gb|EEP54217.1| transcriptional regulator, DeoR family [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 261
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 44/139 (31%), Gaps = 17/139 (12%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKE---FMI------------LLADKIANG 46
+ + K + A + + + + TG+T ++ F+ + ++
Sbjct: 81 NEDE-KIKIGKAAANLIQEDDVIIIDTGTTTEKLAQFIDPNLNISALIFNTNILMALSKK 139
Query: 47 FRVQVIPSSRNTENFCKIHHIPL-HSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLRE 105
+ +I S + P S + + I L + +L +
Sbjct: 140 KNINLIFSGGYFHQNTMMFESPEGISLIEKTRATKVFVSASGIHETLGVTCSNNYEVLTK 199
Query: 106 KIIAHAASRFIVIGDESKR 124
+ I ++ I++ D K
Sbjct: 200 QAIIKSSVEKILLVDSKKF 218
>gi|317473039|ref|ZP_07932339.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
gi|316899468|gb|EFV21482.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
Length = 254
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
++ K+ A+ A + DG + + +G+T LA + + + V+ +
Sbjct: 77 MEEKQKIAKTARAMIEDGDMILLDSGTTTL----ELAKLLKDANNLTVVTNDLQ 126
>gi|221369804|ref|YP_002520900.1| Transcriptional regulator, DeoR family [Rhodobacter sphaeroides
KD131]
gi|221162856|gb|ACM03827.1| Transcriptional regulator, DeoR family [Rhodobacter sphaeroides
KD131]
Length = 239
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A RA + G T+ + G+T LA ++ RV V+
Sbjct: 80 AKEALAVRAAALIEPGDTVFLDCGTTTPY----LAARVPQNARVTVVT 123
>gi|165977068|ref|YP_001652661.1| glucitol operon repressor [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165877169|gb|ABY70217.1| glucitol operon repressor [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 252
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A++ + D + + +GST + +L
Sbjct: 78 KLAIANEAVKQIRDHNRIIIDSGSTTGAMVKML 110
>gi|15672939|ref|NP_267113.1| lactose transport regulator [Lactococcus lactis subsp. lactis
Il1403]
gi|281491460|ref|YP_003353440.1| DeoR family fructose/lactose transport transcriptional regulator
[Lactococcus lactis subsp. lactis KF147]
gi|12723895|gb|AAK05055.1|AE006330_3 lactose transport regulator [Lactococcus lactis subsp. lactis
Il1403]
gi|281375178|gb|ADA64691.1| Fructose/lactose transport transcriptional regulator, DeoR family
[Lactococcus lactis subsp. lactis KF147]
gi|326406502|gb|ADZ63573.1| DeoR family transcriptional regulator, fructose operon
transcriptional repressor [Lactococcus lactis subsp.
lactis CV56]
Length = 233
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
Q K A++A+ + DG + + G+T LA+ I I ++ +
Sbjct: 77 QEKEEIAQKALSKIKDGDIIFLDAGTTTGI----LAELINQSHLYLTIVTNSVSH 127
>gi|126464216|ref|YP_001045329.1| DeoR family transcriptional regulator [Rhodobacter sphaeroides ATCC
17029]
gi|126106027|gb|ABN78557.1| transcriptional regulator, DeoR family [Rhodobacter sphaeroides
ATCC 17029]
Length = 254
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
K A RA + G T+ + G+T LA ++ RV V+
Sbjct: 95 AKEALAVRAAALIEPGDTVFLDCGTTTPY----LAARVPQNARVTVVT 138
>gi|325526562|gb|EGD04115.1| DeoR family transcriptional regulator [Burkholderia sp. TJI49]
Length = 256
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
+ KR + A Q+V G T+ + GST + + D
Sbjct: 79 QTEEKRRIGKLAAQFVKTGDTIFVDCGSTTPFIVDFIPD 117
>gi|170017570|ref|YP_001728489.1| lactose phosphotransferase system repressor [Leuconostoc citreum
KM20]
gi|169804427|gb|ACA83045.1| Lactose phosphotransferase system repressor [Leuconostoc citreum
KM20]
Length = 254
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K+ A+RA Q + G + + G+T E + LAD V S + +
Sbjct: 79 KQKIAQRAAQQLQGGEIIFLDAGTTTGELIPYLAD--KKPAVTVVTNSVHHAAQLSDLMI 136
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLI 95
+ V ++ G ++ ++
Sbjct: 137 PVMIIGGQVKQTTDAVIGAAAVNQINHMV 165
>gi|30263722|ref|NP_846099.1| DeoR family transcriptional regulator [Bacillus anthracis str.
Ames]
gi|47529135|ref|YP_020484.1| DeoR family transcriptional regulator [Bacillus anthracis str.
'Ames Ancestor']
gi|49186566|ref|YP_029818.1| DeoR family transcriptional regulator [Bacillus anthracis str.
Sterne]
gi|165872795|ref|ZP_02217422.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0488]
gi|167636081|ref|ZP_02394387.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0442]
gi|167639745|ref|ZP_02398014.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0193]
gi|170689269|ref|ZP_02880464.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0465]
gi|170706866|ref|ZP_02897324.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0389]
gi|177652067|ref|ZP_02934613.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0174]
gi|190568464|ref|ZP_03021371.1| transcriptional regulator, DeoR family [Bacillus anthracis
Tsiankovskii-I]
gi|227813382|ref|YP_002813391.1| transcriptional regulator, DeoR family [Bacillus anthracis str. CDC
684]
gi|229604191|ref|YP_002867958.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0248]
gi|254683575|ref|ZP_05147435.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. CNEVA-9066]
gi|254735753|ref|ZP_05193459.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Western North America USA6153]
gi|254739548|ref|ZP_05197243.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Kruger B]
gi|254751117|ref|ZP_05203156.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Vollum]
gi|254759434|ref|ZP_05211459.1| transcriptional regulator, DeoR family protein [Bacillus anthracis
str. Australia 94]
gi|30258366|gb|AAP27585.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
Ames]
gi|47504283|gb|AAT32959.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
'Ames Ancestor']
gi|49180493|gb|AAT55869.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
Sterne]
gi|164711473|gb|EDR17023.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0488]
gi|167512146|gb|EDR87523.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0193]
gi|167528593|gb|EDR91355.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0442]
gi|170128284|gb|EDS97153.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0389]
gi|170666727|gb|EDT17495.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0465]
gi|172082436|gb|EDT67501.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0174]
gi|190560468|gb|EDV14446.1| transcriptional regulator, DeoR family [Bacillus anthracis
Tsiankovskii-I]
gi|227003497|gb|ACP13240.1| transcriptional regulator, DeoR family [Bacillus anthracis str. CDC
684]
gi|229268599|gb|ACQ50236.1| transcriptional regulator, DeoR family [Bacillus anthracis str.
A0248]
Length = 250
Score = 35.2 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 77 QIKQQIAKYAASVVEQGDFIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 196 TLANEGYFLIDESKFSEVAFAKIANVE 222
>gi|224500557|ref|ZP_03668906.1| DeoR family transcriptional regulator [Listeria monocytogenes
Finland 1988]
Length = 253
Score = 35.2 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K+ + A ++ + + + +G+T L
Sbjct: 79 KQLIGKEAADFIEENDLIFIDSGTTTSCLAAAL 111
>gi|153801786|ref|ZP_01956372.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
gi|153802086|ref|ZP_01956672.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
gi|153802447|ref|ZP_01957033.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
gi|124122015|gb|EAY40758.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
gi|124122385|gb|EAY41128.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
gi|124122686|gb|EAY41429.1| transcriptional regulator, DeoR family [Vibrio cholerae MZO-3]
Length = 251
Score = 35.2 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 23/148 (15%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS--SRNTENFC 62
+ K A +A + G ++ + GSTA L ++ G VQ++ + +
Sbjct: 78 EEKSLIALKAAELCQPGDSVVINCGSTAFL----LGQQLC-GENVQIVTNYFPLASYLIN 132
Query: 63 KIHHIPLHSPEDVSS-----VDLSIDGFDEIDSRLRLIKGYG---GALLREKIIAHAA-- 112
+ H + + ++ + D D G G L + ++ A
Sbjct: 133 EDHDDVIIIGGQYNRAQSIFLNPAPDSLDGYAGNWMFTSGKGLTEAGLYKTDMLTAVAEQ 192
Query: 113 ------SRFIVIGDESKRVDFLGRGMLP 134
+ +V+ D SK G P
Sbjct: 193 QMLEQIDKLVVVVDSSKVGQRTGMLFCP 220
>gi|319781219|ref|YP_004140695.1| DeoR family transcription regulator [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167107|gb|ADV10645.1| regulatory protein DeoR [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 258
Score = 35.2 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 11/142 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ KR A A V DG + + GST + LA++ + + ++ +++
Sbjct: 82 EAKRQIAALAATMVRDGDAVIVHGGSTCFHLGVKLAERNIRLYTNSMPLAAYLSDHGHCS 141
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLI--KGYGGALLREKI---------IAHAAS 113
+ + S+ + + +G G + E ++ A
Sbjct: 142 LTVAGGDLHREPGIIHSLSQAVPFYASKFFLGAQGLGQEGVMESHPLLVRSIVDLSLCAD 201
Query: 114 RFIVIGDESKRVDFLGRGMLPI 135
+ +V+ D K LP+
Sbjct: 202 QIVVLADSRKLSIHARNVALPL 223
>gi|190150963|ref|YP_001969488.1| transcriptional regulator of sugar metabolism [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|189916094|gb|ACE62346.1| predicted transcriptional regulator of sugar metabolism
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
Length = 252
Score = 35.2 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A++ + D + + +GST + +L
Sbjct: 78 KLAIANEAVKQIRDHNRIIIDSGSTTGAMVKML 110
>gi|126209096|ref|YP_001054321.1| sugar metabolism transcriptional regulator [Actinobacillus
pleuropneumoniae L20]
gi|303250802|ref|ZP_07336996.1| glucitol operon repressor [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303253423|ref|ZP_07339565.1| glucitol operon repressor [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|126097888|gb|ABN74716.1| predicted transcriptional regulator of sugar metabolism
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
gi|302647667|gb|EFL77881.1| glucitol operon repressor [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302650315|gb|EFL80477.1| glucitol operon repressor [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 252
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A++ + D + + +GST + +L
Sbjct: 78 KLAIANEAVKQIRDHNRIIIDSGSTTGAMVKML 110
>gi|146309616|ref|YP_001190081.1| DeoR family transcriptional regulator [Pseudomonas mendocina ymp]
gi|145577817|gb|ABP87349.1| transcriptional regulator, DeoR family [Pseudomonas mendocina ymp]
Length = 256
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 24/148 (16%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----------IANGFR------- 48
K+ AR + + + + + +G+T + L K +AN R
Sbjct: 78 KQAIARAGVTRIREHARIIIDSGTTTAAMIPQLGYKPGLVVMTNSLNVANALRDIEHEPV 137
Query: 49 --VQVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
+ ++E+F + D + + DG D R + L +
Sbjct: 138 LLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDL----ERGTTTFNELLGLSR 193
Query: 107 IIAHAASRFIVIGDESKRVDFLGRGMLP 134
++A A IV+ + K + LP
Sbjct: 194 VMAEVAREVIVMVESDKIGRRIPNLELP 221
>gi|117621325|ref|YP_857361.1| putative HTH-type transcriptional regulator YciT [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117562732|gb|ABK39680.1| putative HTH-type transcriptional regulator YciT [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 248
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 1 MDALQM-KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTE 59
M+ + K A RA Q V DG T+ + GS A LA +A RV +I S
Sbjct: 66 MNINYLLKERLAERAAQLVEDGETVFIEGGS-ANAL---LARHLALHKRVTIITISSYIA 121
Query: 60 NFCKIHHIPLHSP 72
+ + +
Sbjct: 122 HLLRDTQAQVVLL 134
>gi|326800800|ref|YP_004318619.1| DeoR family transcriptional regulator [Sphingobacterium sp. 21]
gi|326551564|gb|ADZ79949.1| transcriptional regulator, DeoR family [Sphingobacterium sp. 21]
Length = 249
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGS 30
L+ KR A +A+ ++ DG + G+
Sbjct: 73 QLEQKRLIAEKALNFIEDGQVVFFDGGT 100
>gi|255534008|ref|YP_003094380.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
gi|255346992|gb|ACU06318.1| regulatory protein DeoR [Pedobacter heparinus DSM 2366]
Length = 248
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 41/140 (29%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCK 63
+ K A++ I + DGM + G G++ +I L ++ S K
Sbjct: 74 EAKILIAKKNIPLIKDGMVILTGGGTS----IIELVKQLPENLNATFFTISPFVAIELAK 129
Query: 64 -----------------IHHIPLHSPEDVSSVD--LSIDGFDEIDSRLRLIKGYGGALLR 104
+ + ++ L + G I + L
Sbjct: 130 YPQVEVILIGGLFSKNSQVTYGGYVINQLLEINADLCLLGTSAIHPQDGLTDTDWEINQL 189
Query: 105 EKIIAHAASRFIVIGDESKR 124
+K + ++ + ++ K
Sbjct: 190 KKAMFSSSKKAAILCISEKL 209
>gi|315304510|ref|ZP_07874773.1| DeoR family transcriptional regulator [Listeria ivanovii FSL
F6-596]
gi|313627119|gb|EFR95989.1| DeoR family transcriptional regulator [Listeria ivanovii FSL
F6-596]
Length = 278
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTE 59
+ K+ A A V DG T+ + G+T L ++ I N V I ++
Sbjct: 103 EEKQRIATLAATMVKDGDTIILDAGTTTGHIATALKERSKLTVITNDINVASIMRFSPSK 162
Query: 60 NFCKIHHIPLHSPEDVSSVD------LSIDGFDEIDSRLRLIKG---YGGALLREK-IIA 109
I + + + + L + KG Y L+ K +
Sbjct: 163 VIVTGGVIYPETFILNGMITSGTLQSIHVHKAFVTTPALDIDKGLMHYDEYLIPAKQQML 222
Query: 110 HAASRFIVIGDESKR 124
H+A I++ D +K
Sbjct: 223 HSADEVILVTDHTKF 237
>gi|307257711|ref|ZP_07539469.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863776|gb|EFM95701.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 237
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A++ + D + + +GST + +L
Sbjct: 63 KLAIANEAVKQIRDHNRIIIDSGSTTGAMVKML 95
>gi|315230614|ref|YP_004071050.1| hypothetical protein TERMP_00850 [Thermococcus barophilus MP]
gi|315183642|gb|ADT83827.1| hypothetical protein TERMP_00850 [Thermococcus barophilus MP]
Length = 271
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
Query: 5 QMKRNAARR--AIQYVV---DGMTLGMGTGSTAKEFMIL-LADKIANGFRVQVIPSSRNT 58
+ KR A+ A+ V + + TG+TA L KI + S T
Sbjct: 12 ESKRLIAKAVVALDEVQYALKHGFVYIATGTTAAYIAEEILGKKIEKEKWTVGVISKGRT 71
>gi|163941401|ref|YP_001646285.1| DeoR family transcriptional regulator [Bacillus weihenstephanensis
KBAB4]
gi|163863598|gb|ABY44657.1| transcriptional regulator, DeoR family [Bacillus weihenstephanensis
KBAB4]
Length = 250
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 77 QIKQQIAKYAASIVEQGDCVYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 196 TFANEGYFLIDESKFSEVAFAKIANVE 222
>gi|307262120|ref|ZP_07543772.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307264319|ref|ZP_07545908.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306868188|gb|EFN00013.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870383|gb|EFN02138.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 237
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A++ + D + + +GST + +L
Sbjct: 63 KLAIANEAVKQIRDHNRIIIDSGSTTGAMVKML 95
>gi|222081184|ref|YP_002540547.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium radiobacter K84]
gi|221725863|gb|ACM28952.1| glycerol-3-phosphate transcriptional regulator protein
[Agrobacterium radiobacter K84]
Length = 254
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K AR A++ V GMT+ + GS A +L K
Sbjct: 77 EEKLAMARAALELVEPGMTVMVNDGSMAAVLGEMLLQK 114
>gi|163732709|ref|ZP_02140154.1| transcriptional regulator [Roseobacter litoralis Och 149]
gi|161394069|gb|EDQ18393.1| transcriptional regulator [Roseobacter litoralis Och 149]
Length = 263
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
A A V DG T+ + +GST E LA +
Sbjct: 84 ERIALAAASQVRDGETIMIDSGSTTIELAKALAYR 118
>gi|291520608|emb|CBK75829.1| Transcriptional regulators of sugar metabolism [Butyrivibrio
fibrisolvens 16/4]
Length = 239
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQV--------IP 53
K A +A + DG + + G+T + + L ++ + N + +
Sbjct: 77 KNAIAEKAASLINDGDCVFLDAGTTTFKMLKYLENRQQLTIVTNDLEIGYQAYKMNFDVI 136
Query: 54 SSRNTENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ + + + + + G ID RL ++ + ++++
Sbjct: 137 MCGGKIQKSTACMFGMMTNDAIRQIKFDYAFLGAASIDERLDVLTPTEAKAVYKRLVVEN 196
Query: 112 ASRFIVIGDESKR 124
++ ++ D SK
Sbjct: 197 SNYSYLLVDSSKF 209
>gi|53729275|ref|ZP_00348360.1| COG1349: Transcriptional regulators of sugar metabolism
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307246556|ref|ZP_07528628.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307248680|ref|ZP_07530694.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307250926|ref|ZP_07532853.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307253296|ref|ZP_07535170.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307255541|ref|ZP_07537347.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259992|ref|ZP_07541705.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852619|gb|EFM84852.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306854891|gb|EFM87080.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306857058|gb|EFM89187.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859283|gb|EFM91322.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306861583|gb|EFM93571.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866020|gb|EFM97895.1| DeoR family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 237
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
K A A++ + D + + +GST + +L
Sbjct: 63 KLAIANEAVKQIRDHNRIIIDSGSTTGAMVKML 95
>gi|253578171|ref|ZP_04855443.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850489|gb|EES78447.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 247
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
+ K+ A+ A + + + G+T + LA
Sbjct: 79 EEKQKIAKYAASLITPDDFVYLDAGTTTGLMLEYLA 114
>gi|227112043|ref|ZP_03825699.1| DNA-binding transcriptional repressor DeoR [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 257
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 41/144 (28%), Gaps = 16/144 (11%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPS----SRNTENFC 62
K+ A V + T+ G+T + ++D++ + +
Sbjct: 81 KQAIGTAAAYLVEENDTVFFDCGTTIPFIIDAISDELPFTAICYSLNTFLALQEKKACRV 140
Query: 63 KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIK-----------GYGGALLREKIIAHA 111
+ H + + D + I + A L K A A
Sbjct: 141 ILCGGEYHPDNAIFTPLSQRSELDNVCPNKAFISAAGIELSAGATCFNFAELGMKQRAMA 200
Query: 112 -ASRFIVIGDESKRVDFLGRGMLP 134
A R I++ D SK + P
Sbjct: 201 TAQRIILVADSSKFGQIKRACIGP 224
>gi|295395196|ref|ZP_06805404.1| glycerol-3-phosphate regulon repressor [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971958|gb|EFG47825.1| glycerol-3-phosphate regulon repressor [Brevibacterium mcbrellneri
ATCC 49030]
Length = 268
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF 47
+K+ A + + G ++ + G+TA L+ K +G
Sbjct: 76 DLKQALAMATAELIEPGESVFIDNGTTALAIAKELSGKGQSGM 118
>gi|268591403|ref|ZP_06125624.1| transcriptional regulator, DeoR family [Providencia rettgeri DSM
1131]
gi|291313054|gb|EFE53507.1| transcriptional regulator, DeoR family [Providencia rettgeri DSM
1131]
Length = 255
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR + A V DG + + G+T E +L ++ F + ++ + + +
Sbjct: 79 KREIGQFASSLVEDGQVVYLDAGTTTFEIARVLGER----FNLTIVTNDFSIMQYLMNKS 134
Query: 67 I 67
Sbjct: 135 Q 135
>gi|86144797|ref|ZP_01063129.1| hypothetical GlpR, transcriptional regulator of sugar metabolism
[Vibrio sp. MED222]
gi|85837696|gb|EAQ55808.1| hypothetical GlpR, transcriptional regulator of sugar metabolism
[Vibrio sp. MED222]
Length = 258
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 24/144 (16%)
Query: 2 DALQ--MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA--------------- 44
D L K++ A+ A + DG + + +G+T L +K
Sbjct: 72 DQLNRSAKQSIAQVAANLIHDGEAVILDSGTTIGLMPQYLMNKQQLVVMTNALNTAYQLS 131
Query: 45 --NGFRVQVI--PSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGG 100
+ V+ R + + H + L +DGFD
Sbjct: 132 KFENIDLHVVGGSLRRASCSLIGNHGEQQIRSYLFDKLFLGVDGFD--LQAGVTTPDSQE 189
Query: 101 ALLREKIIAHAASRFIVIGDESKR 124
A + + A + I + D SK
Sbjct: 190 AQVNRSMCE-VARQIIAVTDSSKF 212
>gi|331091605|ref|ZP_08340439.1| hypothetical protein HMPREF9477_01082 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330403362|gb|EGG82921.1| hypothetical protein HMPREF9477_01082 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 250
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 1 MDAL----QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR 56
MD + K A + +YVV G T+ + G+T +A KI + + V+ +
Sbjct: 65 MDKQTSHCEEKAAIAEKCAEYVVSGNTVFLDAGTTTY----EIARKIMDIPDILVVTNDL 120
Query: 57 NTENFCKIHHIPLHSP 72
K + L
Sbjct: 121 EIAQLLKNSPVELFVC 136
>gi|293395967|ref|ZP_06640248.1| DeoR family transcriptional regulator [Serratia odorifera DSM 4582]
gi|291421465|gb|EFE94713.1| DeoR family transcriptional regulator [Serratia odorifera DSM 4582]
Length = 248
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M +K+ A+ A + DG T+ + +GS A LA +A V +I S N
Sbjct: 67 MSNFILKQKLAQYAATQINDGETVFIESGS-ANAL---LARYLAERKHVTLITVSHYIAN 122
Query: 61 FCKIHHIPLHSP 72
K +
Sbjct: 123 LLKETECEVIVL 134
>gi|116805198|gb|ABK27646.1| putative transcriptional regulator [Lactobacillus paracasei]
Length = 166
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
K+ A+ A++ + + + G+T + + LAD
Sbjct: 45 AKQTIAQAAVRQIEPDDLIFLDAGTTTAQLIPFLAD 80
>gi|15902271|ref|NP_357821.1| DEOR-type transcriptional regulator [Streptococcus pneumoniae R6]
gi|15457773|gb|AAK99031.1| DEOR-type transcriptional regulator [Streptococcus pneumoniae R6]
Length = 264
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 23/140 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR + A++ V D T+ + +GST + V ++ +S NF +
Sbjct: 86 EIKRKIVQEAVKLVSDNETIMIESGSTCALLAEEI---CKQKRNVTIVTNSFFIANFVRA 142
Query: 65 HHIP--------------------LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ L V + G D D +
Sbjct: 143 YDSCRIIVLGGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYDKEMGFTGKDLMRSEV 202
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ I+ A+ + IV+ D SK
Sbjct: 203 VQYISAASDKVIVLTDSSKF 222
>gi|313895898|ref|ZP_07829452.1| transcriptional regulator, DeoR family [Selenomonas sp. oral taxon
137 str. F0430]
gi|312975323|gb|EFR40784.1| transcriptional regulator, DeoR family [Selenomonas sp. oral taxon
137 str. F0430]
Length = 262
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSS 55
Q KR A V G + + GST +A + + + V SS
Sbjct: 78 QQKRMIGITAANLVEKGDIVALDIGSTTM----EIAKALRSHENITVFTSS 124
>gi|65321044|ref|ZP_00394003.1| COG1349: Transcriptional regulators of sugar metabolism [Bacillus
anthracis str. A2012]
Length = 269
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 96 QIKQQIAKYAASVVEQGDFIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 155
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 156 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 214
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 215 TLANEGYFLIDESKFSEVAFAKIANVE 241
>gi|323467306|gb|ADX70993.1| DeoR family transcriptional regulator [Lactobacillus helveticus
H10]
Length = 269
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 7 KRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K A+ A +V G + + G+T E + LAD + ++ + N
Sbjct: 97 KIAIAKYAARNFVQPGDNVFIDAGTTTYELVPFLADIPKVKIITNGVETALCSLNHGIKT 156
Query: 66 HIPLHSPED 74
+ +D
Sbjct: 157 ILIGGEVKD 165
>gi|42782796|ref|NP_980043.1| DeoR family transcriptional regulator [Bacillus cereus ATCC 10987]
gi|42738723|gb|AAS42651.1| transcriptional regulator, DeoR family [Bacillus cereus ATCC 10987]
Length = 250
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 77 QIKQQIAKYAANVVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 196 TLANEGYFLIDESKFSEVAFAKIANVE 222
>gi|331667213|ref|ZP_08368078.1| deoxyribose operon repressor [Escherichia coli TA271]
gi|331065569|gb|EGI37462.1| deoxyribose operon repressor [Escherichia coli TA271]
Length = 143
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ KR AA+ A V TL G+T + +
Sbjct: 77 EEKRRAAKMAATLVEPDQTLFFDCGTTTPWIIEAI 111
>gi|254442675|ref|ZP_05056151.1| transcriptional regulator, DeoR family [Verrucomicrobiae bacterium
DG1235]
gi|198256983|gb|EDY81291.1| transcriptional regulator, DeoR family [Verrucomicrobiae bacterium
DG1235]
Length = 256
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 36/135 (26%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A++ V G T + +TA + LAD +
Sbjct: 77 EKKAAIAQAALELVQPGRTYAFDSSTTAFALVSALADLPFRVVTNSFAVLEHFSHMQEVE 136
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLR---------------LIKGYGGALLREKIIA 109
+ + D D + +G+ + +
Sbjct: 137 LISVGGRYHPKTHTFVGGDTIDALKRHNIHTAFISCIGFDTERGASEGFEQQATFKTRLV 196
Query: 110 HAASRFIVIGDESKR 124
A +++ D SK
Sbjct: 197 EHAENVVLLVDSSKF 211
>gi|167746166|ref|ZP_02418293.1| hypothetical protein ANACAC_00862 [Anaerostipes caccae DSM 14662]
gi|317473285|ref|ZP_07932580.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
gi|167654681|gb|EDR98810.1| hypothetical protein ANACAC_00862 [Anaerostipes caccae DSM 14662]
gi|316899121|gb|EFV21140.1| deoR family bacterial regulatory protein [Anaerostipes sp.
3_2_56FAA]
Length = 260
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
KR A+ A ++V +G + + +GST EF +L
Sbjct: 78 DKKRIIAQGAKEFVREGDIILIDSGSTMLEFAKVL 112
>gi|146318476|ref|YP_001198188.1| sugar metabolism transcriptional regulator [Streptococcus suis
05ZYH33]
gi|145689282|gb|ABP89788.1| Transcriptional regulator of sugar metabolism [Streptococcus suis
05ZYH33]
gi|292558259|gb|ADE31260.1| regulatory protein DeoR [Streptococcus suis GZ1]
Length = 261
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPSSRNT 58
Q KR A A + +V+G + + G+T + L + V+++ T
Sbjct: 91 QEKREIAESAARQIVNGDVIFLDAGTTTGVLIDYLQQENLTVVTNSIHHAVRLVERKIKT 150
Query: 59 E------NFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + E + ++ + G + ID A + I
Sbjct: 151 IIIGGFVKQSTDASVGAVALEQIRQLNFDKAFLGMNGIDKNYFTTPDIEEA-TIKCTIID 209
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
A V+ D SK F + IE
Sbjct: 210 NAKESYVLADASKIGQFSFVKVAAIE 235
>gi|88196108|ref|YP_500923.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|161510403|ref|YP_001576062.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|258450819|ref|ZP_05698878.1| lactose phosphotransferase system repressor [Staphylococcus aureus
A5948]
gi|282926227|ref|ZP_06333860.1| lactose phosphotransferase system repressor [Staphylococcus aureus
A9765]
gi|294848734|ref|ZP_06789479.1| lactose phosphotransferase system repressor [Staphylococcus aureus
A9754]
gi|297209983|ref|ZP_06926379.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300910994|ref|ZP_07128444.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus TCH70]
gi|304379382|ref|ZP_07362117.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|87203666|gb|ABD31476.1| lactose phosphotransferase system repressor, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|160369212|gb|ABX30183.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257861602|gb|EEV84404.1| lactose phosphotransferase system repressor [Staphylococcus aureus
A5948]
gi|282592227|gb|EFB97246.1| lactose phosphotransferase system repressor [Staphylococcus aureus
A9765]
gi|294824113|gb|EFG40537.1| lactose phosphotransferase system repressor [Staphylococcus aureus
A9754]
gi|296885656|gb|EFH24593.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887974|gb|EFK83169.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus TCH70]
gi|304341914|gb|EFM07818.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|320140264|gb|EFW32123.1| DeoR-like helix-turn-helix protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320143535|gb|EFW35316.1| DeoR-like helix-turn-helix protein [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 263
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL 38
+ KR A++A + DG TL G G+T +
Sbjct: 88 QIAEKRFIAKKAASLIEDGDTLFFGPGTTVELLAEE 123
>gi|295681426|ref|YP_003610000.1| DeoR family transcriptional regulator [Burkholderia sp. CCGE1002]
gi|295441321|gb|ADG20489.1| transcriptional regulator, DeoR family [Burkholderia sp. CCGE1002]
Length = 306
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
K A++ + V DG +L + +G+T +A + + R+ VI +S + H+
Sbjct: 78 KEIVAQQICELVQDGDSLILDSGTTCTH----IAQALRSRSRLTVITNSAAIASLLAQHN 133
Query: 67 IP 68
Sbjct: 134 GN 135
>gi|229012892|ref|ZP_04170058.1| Fructose repressor [Bacillus mycoides DSM 2048]
gi|228748379|gb|EEL98238.1| Fructose repressor [Bacillus mycoides DSM 2048]
Length = 269
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 96 QIKQQIAKYAASIVEQGDCVYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 155
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 156 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 214
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 215 TFANEGYFLIDESKFSEVAFAKIANVE 241
>gi|229190865|ref|ZP_04317856.1| Transcriptional regulator, DeoR [Bacillus cereus ATCC 10876]
gi|228592533|gb|EEK50361.1| Transcriptional regulator, DeoR [Bacillus cereus ATCC 10876]
Length = 254
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 10 AARRAIQYVVDGMTLGMGTGSTAKEFMILL--------------ADKIANGFRVQVIPSS 55
AR A+ Y+ +G ++ +G ST + L A + +
Sbjct: 83 IARVAVSYIQEGDSIFIGGASTHNAMLKYLPEVSFTVITNSIEIAGYLREYKNIDTYLIG 142
Query: 56 RNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASRF 115
+ I S+DL I + A K ++ A R
Sbjct: 143 GKVKPSGNITDTLASELISRFSIDLYFSTGGGISLQGISTATPEVAYF-SKRVSEIARRN 201
Query: 116 IVIGDESKR 124
I + +K
Sbjct: 202 ICLAPHNKL 210
>gi|241204998|ref|YP_002976094.1| DeoR family transcriptional regulator [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858888|gb|ACS56555.1| transcriptional regulator, DeoR family [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 240
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 44/142 (30%), Gaps = 16/142 (11%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKI--------ANGFRVQVIPSSRN 57
KR +AI Y+ T+ G+T + LL D+I N +
Sbjct: 79 AKRQVCIQAIDYIHHDDTVFFDCGTTLPYLVDLLPDQIHITAICYAMNVADRLTRKPNVR 138
Query: 58 TENFCKIHHIPLHSPEDVSSV----DLSIDGFDEIDSRLRLIKGYGGALLRE----KIIA 109
++H S S + L I+ + + +G A E K
Sbjct: 139 LVMLGGLYHPASASFSGASGLEMLDQLVINVAFLSAAGVDARRGATCAHFHEAEIKKKAM 198
Query: 110 HAASRFIVIGDESKRVDFLGRG 131
A + I++ D SK
Sbjct: 199 SRARKNILLADSSKIGKLKPAF 220
>gi|301065312|ref|YP_003787335.1| regulatory protein DeoR [Lactobacillus casei str. Zhang]
gi|300437719|gb|ADK17485.1| regulatory protein, DeoR [Lactobacillus casei str. Zhang]
Length = 250
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
KR A RA + + +GM+L + + +TA + L D
Sbjct: 76 DAKRMVASRAGRLIKNGMSLFIDSSTTALVLIRELKD 112
>gi|323172356|gb|EFZ57993.1| deoR-like helix-turn-helix domain protein [Escherichia coli LT-68]
Length = 149
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|319947382|ref|ZP_08021614.1| lactose PTS family porter repressor [Streptococcus australis ATCC
700641]
gi|319746322|gb|EFV98583.1| lactose PTS family porter repressor [Streptococcus australis ATCC
700641]
Length = 248
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
M ++ KR A++ + +G T+ +G G+T L +G V ++ +S
Sbjct: 73 MLNVEEKREIAQKCAALIDEGDTIFIGAGTTTDFIGDYL-----DGKHVSIVTNSLPIFE 127
Query: 61 FCKIHHIPLHSP 72
K
Sbjct: 128 KLKDQPNCDIIL 139
>gi|239630991|ref|ZP_04674022.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239527274|gb|EEQ66275.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 250
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD 41
KR A RA + + +GM+L + + +TA + L D
Sbjct: 76 DAKRMVASRAGRLIKNGMSLFIDSSTTALVLIRELKD 112
>gi|258512285|ref|YP_003185719.1| transcriptional regulator, DeoR family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479011|gb|ACV59330.1| transcriptional regulator, DeoR family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 266
Score = 35.2 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP-SSRNTENFCKIH 65
K A+ A++ + GMT+ + G+T LA IA + + S K
Sbjct: 78 KIAIAKAALRQIESGMTIAIAAGTTT-WV---LAQHIAGFQNLTFLTNSVNVATELSKNG 133
Query: 66 HIPLH 70
+ +
Sbjct: 134 YRDIF 138
>gi|237807215|ref|YP_002891655.1| transcriptional regulator, DeoR family [Tolumonas auensis DSM 9187]
gi|237499476|gb|ACQ92069.1| transcriptional regulator, DeoR family [Tolumonas auensis DSM 9187]
Length = 258
Score = 35.2 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRN 57
K+ A A++ + + + + + ST LAD + + V+ +S N
Sbjct: 80 KKALAIAALRLIKNNQVIFLDS-STTHLL---LADLLPQDKNLTVVTNSIN 126
>gi|126732773|ref|ZP_01748568.1| transcriptional regulator [Sagittula stellata E-37]
gi|126706769|gb|EBA05840.1| transcriptional regulator [Sagittula stellata E-37]
Length = 279
Score = 35.2 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHHI 67
RRA + V +G TL + +GST +F LA + + S +
Sbjct: 106 ERIGRRAAELVQEGETLMVDSGSTTIQFARALA--LRGTTCTVITNSIPVAMTLAQGPQQ 163
Query: 68 PLHSPEDVSSVDLSIDGFDEID 89
L P + + ++ G D +D
Sbjct: 164 VLLCPGEYLPAESAVVGTDTLD 185
>gi|229197826|ref|ZP_04324542.1| Fructose repressor [Bacillus cereus m1293]
gi|228585544|gb|EEK43646.1| Fructose repressor [Bacillus cereus m1293]
Length = 271
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 98 QIKQQIAKYAANVVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENHIRA 157
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 158 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 216
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 217 TLANEGYFLIDESKFSEVAFAKIANVE 243
>gi|227820825|ref|YP_002824795.1| transcriptional regulator, DeoR family [Sinorhizobium fredii
NGR234]
gi|227339824|gb|ACP24042.1| transcriptional regulator, DeoR family [Sinorhizobium fredii
NGR234]
Length = 270
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 14/134 (10%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPSSR 56
K+ AR A+ DG + + G+T + + LA++ IA +
Sbjct: 83 KQAIAREAVALCQDGEPIIINGGTTTFQMVHFLANRRMQVFTNSFPIAEHLLKHSKNTVM 142
Query: 57 NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA----LLREKIIAHAA 112
+ + SP D + ++ G A + E+ + A
Sbjct: 143 LSGGTIYREQNIILSPFDNDVTRNFYARRMFMGAQGLGPLGLMEADPLLIQAEQKLIDQA 202
Query: 113 SRFIVIGDESKRVD 126
+V+ D SK
Sbjct: 203 DELVVLVDSSKFHK 216
>gi|327382371|gb|AEA53847.1| Fructose repressor [Lactobacillus casei LC2W]
gi|327385572|gb|AEA57046.1| Fructose repressor [Lactobacillus casei BD-II]
Length = 249
Score = 35.2 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 14/133 (10%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----KIANGFRVQVIPSSRNTENF 61
K+ A+ A++ + + + G+T + + LAD I G + +
Sbjct: 78 AKQTIAQAAVRQIEPDDLIFLDDGTTTAQLIPFLADIGVTVITTGVDNASLLADYQISTL 137
Query: 62 C----------KIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHA 111
+ + D++ G + + L + +++ H
Sbjct: 138 MLGGMVKPTTKALIGATTAEALNHYRFDVAFIGTNGVHPEFGLTTPDPEEAVIKRLAIHQ 197
Query: 112 ASRFIVIGDESKR 124
AS+ +++ D SK
Sbjct: 198 ASKPVILADPSKF 210
>gi|253729867|ref|ZP_04864032.1| sugar metabolism transcriptional repressor [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253726314|gb|EES95043.1| sugar metabolism transcriptional repressor [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 263
Score = 35.2 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 26/143 (18%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANG---FRVQVIPSSRNTE 59
+ KR AR+A + DG TL G G+T LLA+++ + +P +
Sbjct: 88 QIAEKRFIARKAASLIEDGDTLFFGPGTTV----ELLAEEVNHHTLTIITNCLPVYKILL 143
Query: 60 NFCKIHHIPLHSPEDVSSVDLSIDG------------------FDEIDSRLRLIKGYGGA 101
H ++ + + G + ++ + A
Sbjct: 144 EKQTAHFRVYLIGGEMRHITEAFVGEMANAMLEKLRFSKMFFSSNAVNKGTVMTSTLDEA 203
Query: 102 LLREKIIAHAASRFIVIGDESKR 124
++ + + ++ D +K
Sbjct: 204 YTQQ-LALSNSIEKYLLIDHTKV 225
>gi|313115971|ref|ZP_07801398.1| DeoR-like helix-turn-helix protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310621735|gb|EFQ05263.1| DeoR-like helix-turn-helix protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 253
Score = 34.9 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLA 40
+ K + A+ A + + + + GST E + LA
Sbjct: 81 EQKHSIAQAAAKLINADDFVFIDAGSTTLELVRALA 116
>gi|229167411|ref|ZP_04295149.1| Transcriptional regulator, DeoR [Bacillus cereus AH621]
gi|228615973|gb|EEK73060.1| Transcriptional regulator, DeoR [Bacillus cereus AH621]
Length = 256
Score = 34.9 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 16/144 (11%)
Query: 9 NAARRAIQYVVDGMTLGMGTGS--------------TAKEFMILLADKIANGFRVQVIPS 54
A+ A+ Y+ +G ++ +G S T + +A K+ +
Sbjct: 82 AIAKVAVSYIQEGDSVFIGGASIHYAMLKYLPETSFTVITNALEIASKLREYKNIDTYLI 141
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
+ + S+DL I A K ++ A R
Sbjct: 142 GGKVKPSGNMTDTLASELISRFSIDLYFSTGGGISLNGISTATPEVAYF-GKTVSKIARR 200
Query: 115 FIVIGDESKR-VDFLGRGMLPIEI 137
I + +K +D +G IEI
Sbjct: 201 NICLAPHTKLGIDCFIKGESLIEI 224
>gi|82751794|ref|YP_417535.1| lactose phosphotransferase system repressor [Staphylococcus aureus
RF122]
gi|82657325|emb|CAI81766.1| lactose phosphotransferase system repressor [Staphylococcus aureus
RF122]
Length = 251
Score = 34.9 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL 38
+ KR A++A + DG TL G G+T +
Sbjct: 76 QIAEKRFIAKKAASLIEDGDTLFFGPGTTVELLAEE 111
>gi|91795089|ref|YP_564740.1| regulatory protein, DeoR [Shewanella denitrificans OS217]
gi|91717091|gb|ABE57017.1| transcriptional regulator, DeoR family [Shewanella denitrificans
OS217]
Length = 256
Score = 34.9 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 34/153 (22%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSR---------- 56
K+ A A + + D + + +GST + L NG R V+ ++
Sbjct: 78 KQAIATEAAKLIRDHNRIIIDSGSTTSGIVQQL-----NGKRGLVVMTNSLQLANAIHEL 132
Query: 57 ---------------NTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGA 101
++E+F + + + + DG D + G +
Sbjct: 133 EHEPTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLARGTTTFNELTGLS 192
Query: 102 LLREKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
K++A + +V+ + +K + LP
Sbjct: 193 ----KVMAEMSREVVVLLESTKIGRKIPNLELP 221
>gi|229495295|ref|ZP_04389030.1| succinyl-CoA:coenzyme A transferase [Porphyromonas endodontalis
ATCC 35406]
gi|229317738|gb|EEN83636.1| succinyl-CoA:coenzyme A transferase [Porphyromonas endodontalis
ATCC 35406]
Length = 495
Score = 34.9 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 4 LQMKRNAARRAIQYVVDGMTLGMGT 28
++ K+ A+ A +V DG +G G
Sbjct: 1 MEKKKMTAQEAAAFVQDGFNVGFGG 25
>gi|21283851|ref|NP_646939.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus MW2]
gi|49486985|ref|YP_044206.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57650784|ref|YP_186999.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus COL]
gi|87160275|ref|YP_494792.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|151222312|ref|YP_001333134.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus str. Newman]
gi|262048476|ref|ZP_06021360.1| lactose phosphotransferase system repressor [Staphylococcus aureus
D30]
gi|262052400|ref|ZP_06024601.1| lactose phosphotransferase system repressor [Staphylococcus aureus
930918-3]
gi|284025226|ref|ZP_06379624.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus 132]
gi|59798267|sp|Q6G7B8|LACR_STAAS RecName: Full=Lactose phosphotransferase system repressor
gi|59799787|sp|P0A0P9|LACR_STAAW RecName: Full=Lactose phosphotransferase system repressor
gi|59799788|sp|P0A0Q0|LACR_STAA8 RecName: Full=Lactose phosphotransferase system repressor
gi|81693993|sp|Q5HE08|LACR_STAAC RecName: Full=Lactose phosphotransferase system repressor
gi|153035|gb|AAA67854.1| lacR repressor [Staphylococcus aureus]
gi|21205293|dbj|BAB95987.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus MW2]
gi|49245428|emb|CAG43905.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57284970|gb|AAW37064.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus COL]
gi|87126249|gb|ABD20763.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|150375112|dbj|BAF68372.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus str. Newman]
gi|259159705|gb|EEW44748.1| lactose phosphotransferase system repressor [Staphylococcus aureus
930918-3]
gi|259163334|gb|EEW47892.1| lactose phosphotransferase system repressor [Staphylococcus aureus
D30]
gi|269941791|emb|CBI50200.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus TW20]
gi|315198274|gb|EFU28605.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus CGS01]
gi|329314882|gb|AEB89295.1| Lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus T0131]
gi|329724133|gb|EGG60653.1| transcriptional regulator, DeoR family [Staphylococcus aureus
subsp. aureus 21189]
Length = 251
Score = 34.9 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL 38
+ KR A++A + DG TL G G+T +
Sbjct: 76 QIAEKRFIAKKAASLIEDGDTLFFGPGTTVELLAEE 111
>gi|332685884|ref|YP_004455658.1| lactose phosphotransferase system repressor [Melissococcus
plutonius ATCC 35311]
gi|332369893|dbj|BAK20849.1| lactose phosphotransferase system repressor [Melissococcus
plutonius ATCC 35311]
Length = 254
Score = 34.9 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 19/36 (52%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ A++A++ + + + +G G+T + + K
Sbjct: 80 KKAIAQKAVELINEDEAIFLGPGTTIELVAKAINKK 115
>gi|322389627|ref|ZP_08063175.1| lactose PTS family porter repressor [Streptococcus parasanguinis
ATCC 903]
gi|321143626|gb|EFX39056.1| lactose PTS family porter repressor [Streptococcus parasanguinis
ATCC 903]
Length = 247
Score = 34.9 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 44/133 (33%), Gaps = 15/133 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD----------KIANGFRVQVIPS 54
Q+K A +A + + D + + G+T + + + + A + +P+
Sbjct: 77 QVKSKIAVKAAELIKDHDVIFIDAGTTNELLVQEIVNPTVTVVTNSIHHATKLVERNVPT 136
Query: 55 SRNTENFCKIHHIPL--HSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + + ++ + G + ID ++ I
Sbjct: 137 VIIGGKVKSSTDASIGGIALNQIGQLNFDKAFLGMNGIDDEFYSTPDLEEG-SVKRAIIE 195
Query: 111 AASRFIVIGDESK 123
A + ++ D+SK
Sbjct: 196 NAKKTYILADDSK 208
>gi|260913314|ref|ZP_05919795.1| L-fucose operon activator [Pasteurella dagmatis ATCC 43325]
gi|260632545|gb|EEX50715.1| L-fucose operon activator [Pasteurella dagmatis ATCC 43325]
Length = 261
Score = 34.9 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD--------------KIANGFRVQ 50
KR A+ A++YV +G +G+ ST+ F + D + N ++
Sbjct: 87 DAKRLIAQNAVEYVFEGAVIGLDASSTSWHFSQQIPDIPCTVVTNSMHNITALVNKPNIK 146
Query: 51 VIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
I + + + PL +D+ I ID+ + + ++ +
Sbjct: 147 TIATGGVYSSKYDAFYGPLSEQLLLRLHIDIGIFSCIGIDNSGGIWESNELNASIKRKMM 206
Query: 110 HAASRFIVIGDESKR 124
A+ + ++ D SK
Sbjct: 207 DASGQRFLLVDSSKF 221
>gi|212697192|ref|ZP_03305320.1| hypothetical protein ANHYDRO_01759 [Anaerococcus hydrogenalis DSM
7454]
gi|212675967|gb|EEB35574.1| hypothetical protein ANHYDRO_01759 [Anaerococcus hydrogenalis DSM
7454]
Length = 229
Score = 34.9 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 16/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLAD--------------KIANGFRVQ 50
+ K A++A + + D + + G+T + + L N +
Sbjct: 77 ESKIRIAKKASKEIFDSKYIYLDGGTTINQLIDYLPQCCTVITNGIMHLEKLGKNNIKTI 136
Query: 51 VIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + T I L + + DL G + + A+ +
Sbjct: 137 FLGGNFKTRTNVVIGEQTLDNLLKYN-FDLCFIGANGYCNGEFTTHDPNEAI-IKNTAIK 194
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
+ R I++ D SK + IE
Sbjct: 195 RSKRSIILLDRSKFGKVYFSKICNIE 220
>gi|19703573|ref|NP_603135.1| DeoR family transcriptional regulator [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|19713673|gb|AAL94434.1| Transcriptional regulator, DeoR family [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 258
Score = 34.9 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN-GFRVQVIPSSRNTENFCK 63
++KR A++ Q + MT+ + G+T LA ++N + + ++
Sbjct: 80 EIKRKIAKKIFQKIQSNMTIILDAGTTTY----ELATLLSNSSLKKICVITNDLYIALEL 135
Query: 64 IHHIPLHSPEDVSSV---------------------DLSIDGFDEIDSRLRLIKGYGGAL 102
+ V D++ G I L
Sbjct: 136 YQKKDIKVLLLGGEVSSETGSTATVFSLQQIEGYNADIAFLGVSSISEFFDLTVPTEIKA 195
Query: 103 LREKIIAHAASRFIVIGDESKRVD 126
++ + + +++ D SK
Sbjct: 196 FLKRTMMKISKETVLLVDSSKFQK 219
>gi|145633819|ref|ZP_01789542.1| L-fucose operon activator [Haemophilus influenzae 3655]
gi|144985322|gb|EDJ92157.1| L-fucose operon activator [Haemophilus influenzae 3655]
Length = 249
Score = 34.9 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEF------------------MILLADKIANGF 47
KR+ A++A+ + + +G+ ST+ F + L N
Sbjct: 76 AKRHIAQKALDLLYENAVIGLDASSTSWYFAYLMPDIPCTVVTNSMFNINAL----VNKS 131
Query: 48 RVQVIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ I + + + PL ++ S+ ID + + ++
Sbjct: 132 NVKTIVTGGVYSAKYEAFYGPLSEYLLQRLHINFSVFSCSGIDQNGNIWESNELNASLKR 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R ++ D SK
Sbjct: 192 KMIEASERAYLLIDSSKF 209
>gi|68249314|ref|YP_248426.1| L-fucose operon activator [Haemophilus influenzae 86-028NP]
gi|145631649|ref|ZP_01787413.1| L-fucose operon activator [Haemophilus influenzae R3021]
gi|145642184|ref|ZP_01797752.1| ATP-dependent helicase HepA [Haemophilus influenzae R3021]
gi|68057513|gb|AAX87766.1| L-fucose operon activator [Haemophilus influenzae 86-028NP]
gi|144982728|gb|EDJ90260.1| L-fucose operon activator [Haemophilus influenzae R3021]
gi|145273108|gb|EDK12986.1| ATP-dependent helicase HepA [Haemophilus influenzae 22.4-21]
Length = 249
Score = 34.9 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 23/138 (16%)
Query: 6 MKRNAARRAIQYVVDGMTLGMGTGSTAKEF------------------MILLADKIANGF 47
KR+ A++A+ + + +G+ ST+ F + L N
Sbjct: 76 AKRHIAQKALDLLYENAVIGLDASSTSWYFAYLMPDIPCTVVTNSMFNINAL----VNKS 131
Query: 48 RVQVIPSSRNTENFCKIHHIPLH-SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREK 106
V+ I + + + PL ++ S+ ID + + ++
Sbjct: 132 NVKTIVTGGVYSAKYEAFYGPLSEYLLQRLHINFSVFSCSGIDQNGNIWESNELNASLKR 191
Query: 107 IIAHAASRFIVIGDESKR 124
+ A+ R ++ D SK
Sbjct: 192 KMIEASERAYLLIDSSKF 209
>gi|323168264|gb|EFZ53949.1| deoR-like helix-turn-helix domain protein [Shigella sonnei 53G]
Length = 139
Score = 34.9 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 57 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 109
>gi|310826681|ref|YP_003959038.1| hypothetical protein ELI_1087 [Eubacterium limosum KIST612]
gi|308738415|gb|ADO36075.1| hypothetical protein ELI_1087 [Eubacterium limosum KIST612]
Length = 256
Score = 34.9 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 5/38 (13%), Positives = 17/38 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K+ + A + + + G+T + + +++K
Sbjct: 79 EEKKRIGKYAASLIKKSDFVFIDAGTTTEALIDYISEK 116
>gi|295092500|emb|CBK78607.1| glucosamine-6-phosphate isomerase [Clostridium cf.
saccharolyticum K10]
Length = 247
Score = 34.9 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 2 DALQMKRNAA--RRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGF 47
+ ++ R AA A V LG+ TGST + L D+ G
Sbjct: 8 NYEELSRRAADQIAAQILVKPDCVLGLATGSTPEGTYRELVDRYETGI 55
>gi|190895551|ref|YP_001985843.1| transcriptional regulator DeoR family [Rhizobium etli CIAT 652]
gi|190699496|gb|ACE93580.1| probable transcriptional regulator protein, DeoR family [Rhizobium
etli CIAT 652]
gi|327189505|gb|EGE56660.1| putative transcriptional regulator protein, DeoR family [Rhizobium
etli CNPAF512]
Length = 270
Score = 34.9 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 46/145 (31%), Gaps = 14/145 (9%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
KR AR A+ G + + G+T + + +A + ++
Sbjct: 81 DKKRAIARAAVDLCEAGDAIIINGGTTTFQMVHYMAGHRMQVMTNSFAIAEHLVKHSKNT 140
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEI-----DSRLRLIKGYGG---------ALLREKIIAH 110
+P + S+ LS D I +G G + E+ + H
Sbjct: 141 VTVPGGAIYREQSLILSPFDNDAIRNFYARRMFIGAQGVGPLGIMEADALIIQSEQKLMH 200
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A +V+ D SK + P+
Sbjct: 201 QADELVVMVDSSKFNRRSSLILCPL 225
>gi|323179760|gb|EFZ65321.1| deoR-like helix-turn-helix domain protein [Escherichia coli 1180]
gi|323185553|gb|EFZ70914.1| deoR-like helix-turn-helix domain protein [Escherichia coli 1357]
gi|333019146|gb|EGK38436.1| deoR-like helix-turn-helix domain protein [Shigella flexneri K-304]
gi|333019560|gb|EGK38840.1| deoR-like helix-turn-helix domain protein [Shigella flexneri K-227]
Length = 139
Score = 34.9 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 57 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 109
>gi|153815024|ref|ZP_01967692.1| hypothetical protein RUMTOR_01241 [Ruminococcus torques ATCC 27756]
gi|317501538|ref|ZP_07959734.1| DeoR family transcriptional regulator [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088600|ref|ZP_08337511.1| hypothetical protein HMPREF1025_01094 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847592|gb|EDK24510.1| hypothetical protein RUMTOR_01241 [Ruminococcus torques ATCC 27756]
gi|316897049|gb|EFV19124.1| DeoR family transcriptional regulator [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407557|gb|EGG87057.1| hypothetical protein HMPREF1025_01094 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 247
Score = 34.9 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
+ K A+ A + D + + G++ + LA+K
Sbjct: 79 EEKIKIAQYAADMIGDNDFVYLDAGTSVGYMVEFLAEK 116
>gi|315033166|gb|EFT45098.1| DeoR-like helix-turn-helix protein [Enterococcus faecalis TX0017]
gi|329575403|gb|EGG56946.1| transcriptional regulator, DeoR family [Enterococcus faecalis
TX1467]
Length = 249
Score = 34.9 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 19/66 (28%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR A V +G + + G++ + L +I +P +
Sbjct: 76 KRRLGEYAASLVEEGDIIFLDGGTSMMYLIDALPKEIHLRIITASLPIADKCSQLINADI 135
Query: 67 IPLHSP 72
L
Sbjct: 136 YCLGGM 141
>gi|289435633|ref|YP_003465505.1| transcriptional regulator, DeoR family [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289171877|emb|CBH28423.1| transcriptional regulator, DeoR family [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|313636538|gb|EFS02265.1| DeoR family transcriptional regulator [Listeria seeligeri FSL
S4-171]
Length = 252
Score = 34.9 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK-----IANGFRVQVIPSSRNTE 59
+ K+ A A V DG T+ + G+T L ++ I N V I ++
Sbjct: 77 EEKQRIATLAATMVKDGDTIILDAGTTTGHIATALKERSKLTVITNDINVASIMRFSPSK 136
Query: 60 NFCKIHHIPLHSPEDVSSVD------LSIDGFDEIDSRLRLIKG---YGGALLREK-IIA 109
I + + + + L + KG Y L+ K +
Sbjct: 137 VIVTGGVIYPETFILNGMITSGTLQSIHVHKAFVTTPALDIDKGLMHYDEYLIPAKQQML 196
Query: 110 HAASRFIVIGDESKR 124
H+A I++ D +K
Sbjct: 197 HSADEVILVTDHTKF 211
>gi|313124378|ref|YP_004034637.1| lactose phosphotransferase system repressor [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280941|gb|ADQ61660.1| Lactose phosphotransferase system repressor [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|325685576|gb|EGD27663.1| lactose PTS family porter repressor [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 255
Score = 34.9 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
Q K+ A+ A V D T+ +G G+T + + L
Sbjct: 78 QEKQEIAKVAASLVNDNETIYVGPGTTLEFMVACL 112
>gi|303269379|ref|ZP_07355150.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae BS458]
gi|302641097|gb|EFL71473.1| lactose phosphotransferase system repressor [Streptococcus
pneumoniae BS458]
Length = 246
Score = 34.9 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 46/145 (31%), Gaps = 15/145 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK----------IANGFRVQVIPS 54
Q K+ A++A + + + + G+ + L +K A + IP+
Sbjct: 77 QEKKLLAQKAASLIKEQDVIFIDAGTPTAFLIHELVNKNVTVVTNSIHHAAQLVEKQIPT 136
Query: 55 SRN--TENFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ I + ++ + + G + +D ++ I
Sbjct: 137 VMVGGSVKTATDASIGGVALNQINQLHFDRAFIGMNGVDDGYYTTPDMEEG-AVKRAILE 195
Query: 111 AASRFIVIGDESKRVDFLGRGMLPI 135
A + V+ D SK + P+
Sbjct: 196 NAKQTYVLVDSSKIGQTCFAKVAPL 220
>gi|149017940|ref|ZP_01834399.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae SP23-BS72]
gi|147931504|gb|EDK82482.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae SP23-BS72]
gi|332077548|gb|EGI88009.1| DNA-binding transcriptional regulator [Streptococcus pneumoniae
GA41301]
Length = 248
Score = 34.9 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 17/137 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR + A++ V D T+ + +GST + + N V N
Sbjct: 70 EIKRKIVQEAVKLVSDNETIMIESGSTCALLAEEICKQKRNVTIVTNSFFIANFVRAYDS 129
Query: 65 HHIPLH-----------------SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
I + V + G D D + +
Sbjct: 130 CRIIVLGGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYDKEMGFTGKDLMRSEVVQY 189
Query: 108 IAHAASRFIVIGDESKR 124
I+ A+ + IV+ D SK
Sbjct: 190 ISAASDKVIVLTDSSKF 206
>gi|328544725|ref|YP_004304834.1| transcriptional regulator, DeoR family [polymorphum gilvum
SL003B-26A1]
gi|326414467|gb|ADZ71530.1| Transcriptional regulator, DeoR family [Polymorphum gilvum
SL003B-26A1]
Length = 253
Score = 34.9 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 8 RNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN 45
AR A+Q + L +G+GST +A ++ N
Sbjct: 80 ERIARAAVQILKGAQVLMIGSGSTTVHTARRIAVEMKN 117
>gi|322378230|ref|ZP_08052714.1| phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP
cyclohydrolase [Streptococcus sp. M334]
gi|321280860|gb|EFX57876.1| phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP
cyclohydrolase [Streptococcus sp. M334]
Length = 515
Score = 34.9 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 13/46 (28%)
Query: 11 ARRAIQYVV--------DGMTLGMGTGST-----AKEFMILLADKI 43
A +AI+YV D MTLG+G+G T + + D++
Sbjct: 409 AWKAIKYVKSNGIIVTNDHMTLGVGSGQTNRVASVRIAIDQAKDRL 454
>gi|256847615|ref|ZP_05553060.1| transcriptional regulator [Lactobacillus coleohominis 101-4-CHN]
gi|256715304|gb|EEU30280.1| transcriptional regulator [Lactobacillus coleohominis 101-4-CHN]
Length = 254
Score = 34.9 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 24/137 (17%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIHH 66
KR+ A + + D + + + STA + L +K +V +I ++ N H+
Sbjct: 79 KRSLGTEAAKNISDHDIVFVNSSSTAFYAVKALLNK-----KVSIITNNGNVAKLLSDHN 133
Query: 67 IPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGAL------------LRE-------KI 107
I + + I D + ++ G + +
Sbjct: 134 IASIILSGGNVNNRDIMSGDVANRTFLSMRSDWGIIGCAGLSLEQGISTPGIEEANVNRN 193
Query: 108 IAHAASRFIVIGDESKR 124
I + R IV+ D SK
Sbjct: 194 IIKNSRRLIVVADYSKF 210
>gi|238799071|ref|ZP_04642529.1| Uncharacterized HTH-type transcriptional regulator yciT [Yersinia
mollaretii ATCC 43969]
gi|238717084|gb|EEQ08942.1| Uncharacterized HTH-type transcriptional regulator yciT [Yersinia
mollaretii ATCC 43969]
Length = 248
Score = 34.9 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
M MK+ A A V DG T+ + +GS+ LA +
Sbjct: 67 MTHFAMKQKLAHYAASLVNDGETVFIESGSSNALLAHHLAQR 108
>gi|319652293|ref|ZP_08006410.1| hypothetical protein HMPREF1013_03023 [Bacillus sp. 2_A_57_CT2]
gi|317395954|gb|EFV76675.1| hypothetical protein HMPREF1013_03023 [Bacillus sp. 2_A_57_CT2]
Length = 263
Score = 34.9 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTEN 60
K+ A ++ DG T+ + GST +A I N V ++ +S
Sbjct: 82 KKKIGEAAASFISDGETIVLDVGSTTLH----IAGSIENVENVTIVTNSLAAAE 131
>gi|304395050|ref|ZP_07376934.1| transcriptional regulator, DeoR family [Pantoea sp. aB]
gi|304357303|gb|EFM21666.1| transcriptional regulator, DeoR family [Pantoea sp. aB]
Length = 249
Score = 34.9 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK 42
K+ AR A V G ++ + GST LAD+
Sbjct: 73 KQALARHAASLVQAGESVFIEGGSTNALLARALADR 108
>gi|238023882|ref|YP_002908114.1| DeoR family transcriptional regulator [Burkholderia glumae BGR1]
gi|237878547|gb|ACR30879.1| Transcriptional regulator, DeoR family protein [Burkholderia glumae
BGR1]
Length = 253
Score = 34.9 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
K++ RRA V DG +L + +GST + L D+
Sbjct: 75 DAKQSIGRRAADLVPDGASLLLDSGSTTHAVALALTDRHR 114
>gi|313639610|gb|EFS04417.1| DeoR family transcriptional regulator [Listeria seeligeri FSL
S4-171]
Length = 254
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKETIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFTRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G G+ L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGSNLIENIHA 166
>gi|293433645|ref|ZP_06662073.1| HTH-type transcriptional regulator yciT [Escherichia coli B088]
gi|300819002|ref|ZP_07099206.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
gi|291324464|gb|EFE63886.1| HTH-type transcriptional regulator yciT [Escherichia coli B088]
gi|300528463|gb|EFK49525.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 107-1]
Length = 249
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|260867733|ref|YP_003234135.1| putative DNA-binding transcriptional regulator [Escherichia coli
O111:H- str. 11128]
gi|257764089|dbj|BAI35584.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O111:H- str. 11128]
Length = 249
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|253751604|ref|YP_003024745.1| DeoR family regulatory protein [Streptococcus suis SC84]
gi|253753506|ref|YP_003026647.1| DeoR family transcriptional regulator [Streptococcus suis P1/7]
gi|253755669|ref|YP_003028809.1| DeoR family transcriptional regulator [Streptococcus suis BM407]
gi|251815893|emb|CAZ51507.1| DeoR family regulatory protein [Streptococcus suis SC84]
gi|251818133|emb|CAZ55927.1| DeoR family regulatory protein [Streptococcus suis BM407]
gi|251819752|emb|CAR45633.1| DeoR family regulatory protein [Streptococcus suis P1/7]
gi|319758043|gb|ADV69985.1| DeoR family regulatory protein [Streptococcus suis JS14]
Length = 249
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIAN------GFRVQVIPSSRNT 58
Q KR A A + +V+G + + G+T + L + V+++ T
Sbjct: 79 QEKREIAESAARQIVNGDVIFLDAGTTTGVLIDYLQQENLTVVTNSIHHAVRLVERKIKT 138
Query: 59 E------NFCKIHHIPLHSPEDVSSVDL--SIDGFDEIDSRLRLIKGYGGALLREKIIAH 110
+ + E + ++ + G + ID A + I
Sbjct: 139 IIIGGFVKQSTDASVGAVALEQIRQLNFDKAFLGMNGIDKNYFTTPDIEEA-TIKCTIID 197
Query: 111 AASRFIVIGDESKRVDFLGRGMLPIE 136
A V+ D SK F + IE
Sbjct: 198 NAKESYVLADASKIGQFSFVKVAAIE 223
>gi|116516292|ref|YP_815748.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae D39]
gi|148987987|ref|ZP_01819450.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae SP6-BS73]
gi|168484629|ref|ZP_02709581.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae CDC1873-00]
gi|168485985|ref|ZP_02710493.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae CDC1087-00]
gi|169832974|ref|YP_001693775.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae Hungary19A-6]
gi|194398744|ref|YP_002036948.1| transcriptional regulator [Streptococcus pneumoniae G54]
gi|221231149|ref|YP_002510301.1| DeoR family regulatory protein [Streptococcus pneumoniae ATCC
700669]
gi|225860285|ref|YP_002741794.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae Taiwan19F-14]
gi|298230505|ref|ZP_06964186.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298256027|ref|ZP_06979613.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298502064|ref|YP_003724004.1| DeoR family transcriptional regulator [Streptococcus pneumoniae
TCH8431/19A]
gi|116076868|gb|ABJ54588.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae D39]
gi|147926451|gb|EDK77524.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae SP6-BS73]
gi|168995476|gb|ACA36088.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae Hungary19A-6]
gi|172042175|gb|EDT50221.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae CDC1873-00]
gi|183570861|gb|EDT91389.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae CDC1087-00]
gi|194358411|gb|ACF56859.1| transcriptional regulator [Streptococcus pneumoniae G54]
gi|220673609|emb|CAR68096.1| DeoR family regulatory protein [Streptococcus pneumoniae ATCC
700669]
gi|225727035|gb|ACO22886.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae Taiwan19F-14]
gi|298237659|gb|ADI68790.1| DeoR family transcriptional regulator [Streptococcus pneumoniae
TCH8431/19A]
gi|332076695|gb|EGI87157.1| DNA-binding transcriptional regulator [Streptococcus pneumoniae
GA17545]
gi|332202161|gb|EGJ16230.1| DNA-binding transcriptional regulator [Streptococcus pneumoniae
GA41317]
gi|332203413|gb|EGJ17480.1| DNA-binding transcriptional regulator [Streptococcus pneumoniae
GA47368]
gi|332204255|gb|EGJ18320.1| DNA-binding transcriptional regulator [Streptococcus pneumoniae
GA47901]
Length = 248
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 17/137 (12%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR + A++ V D T+ + +GST + + N V N
Sbjct: 70 EIKRKIVQEAVKLVSDNETIMIESGSTCALLAEEICKQKRNVTIVTNSFFIANFVRAYDS 129
Query: 65 HHIPLH-----------------SPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKI 107
I + V + G D D + +
Sbjct: 130 CRIIVLGGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYDKEMGFTGKDLMRSEVVQY 189
Query: 108 IAHAASRFIVIGDESKR 124
I+ A+ + IV+ D SK
Sbjct: 190 ISAASDKVIVLTDSSKF 206
>gi|91210579|ref|YP_540565.1| putative DEOR-type transcriptional regulator [Escherichia coli
UTI89]
gi|91072153|gb|ABE07034.1| putative DEOR-type transcriptional regulator [Escherichia coli
UTI89]
Length = 249
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|24112683|ref|NP_707193.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 301]
gi|24051599|gb|AAN42900.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 301]
Length = 249
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|150016715|ref|YP_001308969.1| DeoR family transcriptional regulator [Clostridium beijerinckii
NCIMB 8052]
gi|149903180|gb|ABR34013.1| transcriptional regulator, DeoR family [Clostridium beijerinckii
NCIMB 8052]
Length = 250
Score = 34.9 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 2 DALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILL 39
+ + K A+ A + DG L + G+T + + +
Sbjct: 77 NVDE-KSEIAKHAAALIEDGDILYLDAGTTTEILIDFI 113
>gi|313634954|gb|EFS01344.1| DeoR family transcriptional regulator [Listeria seeligeri FSL
N1-067]
Length = 254
Score = 34.9 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
+ K A+ A V + T+ + STA LA ++ R+ VI S T
Sbjct: 77 EEKETIAKEAATLVKNNQTIILDASSTAL----ALAKELHGFTRLTVITSGLYT------ 126
Query: 65 HHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
+D ++ + + G + + ++G G+ L E I A
Sbjct: 127 ----AIELKDNPNISVILTGG-IVTTNSFTLEGILGSNLIENIHA 166
>gi|300919469|ref|ZP_07135969.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300413455|gb|EFJ96765.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 115-1]
Length = 249
Score = 34.9 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|111610126|gb|ABH11548.1| transcription regulator [Lactobacillus helveticus CNRZ32]
gi|328464383|gb|EGF35792.1| repressor of fructose operon [Lactobacillus helveticus MTCC 5463]
Length = 251
Score = 34.9 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 7 KRNAARRAI-QYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKIH 65
K A+ A +V G + + G+T + + LAD + ++ + N
Sbjct: 79 KIAIAKYAARNFVQPGDNVFIDAGTTTYKLVPFLADIPKVKIITNGVETALCSLNHGIKT 138
Query: 66 HIPLHSPED 74
+ +D
Sbjct: 139 ILIGGEVKD 147
>gi|110641519|ref|YP_669249.1| regulatory protein YciT [Escherichia coli 536]
gi|117623543|ref|YP_852456.1| putative DEOR-type transcriptional regulator [Escherichia coli APEC
O1]
gi|191170914|ref|ZP_03032465.1| transcriptional regulator, DeoR family [Escherichia coli F11]
gi|218558274|ref|YP_002391187.1| DNA-binding transcriptional repressor, DeoR family [Escherichia
coli S88]
gi|218689276|ref|YP_002397488.1| DeoR family DNA-binding transcriptional repressor [Escherichia coli
ED1a]
gi|237705312|ref|ZP_04535793.1| regulatory protein YciT [Escherichia sp. 3_2_53FAA]
gi|300971814|ref|ZP_07171648.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|331646611|ref|ZP_08347714.1| regulatory protein, DeoR family [Escherichia coli M605]
gi|110343111|gb|ABG69348.1| putative regulatory protein YciT, DeoR family [Escherichia coli
536]
gi|115512667|gb|ABJ00742.1| putative DEOR-type transcriptional regulator [Escherichia coli APEC
O1]
gi|190908646|gb|EDV68234.1| transcriptional regulator, DeoR family [Escherichia coli F11]
gi|218365043|emb|CAR02746.1| DNA-binding transcriptional repressor, DeoR family [Escherichia
coli S88]
gi|218426840|emb|CAR07692.2| DNA-binding transcriptional repressor, DeoR family [Escherichia
coli ED1a]
gi|222033090|emb|CAP75830.1| Uncharacterized HTH-type transcriptional regulator [Escherichia
coli LF82]
gi|226900069|gb|EEH86328.1| regulatory protein YciT [Escherichia sp. 3_2_53FAA]
gi|281178477|dbj|BAI54807.1| putative transcriptional regulator [Escherichia coli SE15]
gi|294491535|gb|ADE90291.1| transcriptional regulator, DeoR family [Escherichia coli IHE3034]
gi|300309320|gb|EFJ63840.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 200-1]
gi|312945921|gb|ADR26748.1| DNA-binding transcriptional repressor, DeoR family protein
[Escherichia coli O83:H1 str. NRG 857C]
gi|315289126|gb|EFU48524.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 110-3]
gi|323949111|gb|EGB45003.1| deoR family protein regulatory protein [Escherichia coli H252]
gi|323953842|gb|EGB49643.1| deoR family protein regulatory protein [Escherichia coli H263]
gi|324011298|gb|EGB80517.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 60-1]
gi|330911153|gb|EGH39663.1| transcriptional regulatory protein YciT [Escherichia coli AA86]
gi|331045363|gb|EGI17490.1| regulatory protein, DeoR family [Escherichia coli M605]
Length = 249
Score = 34.9 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|310829546|ref|YP_003961903.1| hypothetical protein ELI_3996 [Eubacterium limosum KIST612]
gi|308741280|gb|ADO38940.1| hypothetical protein ELI_3996 [Eubacterium limosum KIST612]
Length = 256
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 29/151 (19%)
Query: 7 KRNAARRAIQYVVDGMTLGMGTGS--TAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
K + A A++ + +G T+ + +GS T LLA++I + I ++
Sbjct: 73 KLSIAEEAVKEIKNGETVMIESGSCCT------LLAEEIVKASKDVTIITNSIYIADHIR 126
Query: 65 H-----------HIPLHSPEDVSSVDL------SID----GFDEIDSRLRLIKGYGGALL 103
I + V + + +D G D +
Sbjct: 127 PALGNHVILLGGEIQMEPMVTVGPIMVQAAKNFYVDKFYTGVDGFTPDGYFTASDIMRVE 186
Query: 104 REKIIAHAASRFIVIGDESKRVDFLGRGMLP 134
+ +A A + IV+ + K V+ +LP
Sbjct: 187 SIRTMAGQAKKTIVLTESEKFVNHGVMALLP 217
>gi|293409678|ref|ZP_06653254.1| transcriptional regulator [Escherichia coli B354]
gi|291470146|gb|EFF12630.1| transcriptional regulator [Escherichia coli B354]
Length = 249
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|149001641|ref|ZP_01826614.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae SP14-BS69]
gi|237649685|ref|ZP_04523937.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae CCRI 1974]
gi|237821383|ref|ZP_04597228.1| putative HTH-type transcriptional regulator YciT [Streptococcus
pneumoniae CCRI 1974M2]
gi|147760099|gb|EDK67088.1| transcriptional regulator, DeoR family protein [Streptococcus
pneumoniae SP14-BS69]
Length = 248
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 23/140 (16%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIPSSRNTENFCKI 64
++KR + A++ V D T+ + +GST + V ++ +S NF +
Sbjct: 70 EIKRKIVQEAVKLVSDNETIMIESGSTCALLAEEI---CKQKRNVTIVTNSFFIANFVRA 126
Query: 65 HHIP--------------------LHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ L V + G D D +
Sbjct: 127 YDSCRVIVLGGEFQKDSQVTVGPLLKEMIQTFHVHQAFVGTDGYDKEMGFTGKDLMRSEV 186
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ I+ A+ + IV+ D SK
Sbjct: 187 VQYISAASDKVIVLTDSSKF 206
>gi|323438654|gb|EGA96397.1| lactose phosphotransferase system repressor [Staphylococcus aureus
O11]
gi|323441765|gb|EGA99408.1| lactose phosphotransferase system repressor [Staphylococcus aureus
O46]
Length = 263
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL 38
+ KR AR+A + DG TL G G+T +
Sbjct: 88 QIAEKRFIARKAASLIEDGDTLFFGPGTTVELLAEE 123
>gi|253681840|ref|ZP_04862637.1| transcriptional regulator, DeoR family [Clostridium botulinum D
str. 1873]
gi|253561552|gb|EES91004.1| transcriptional regulator, DeoR family [Clostridium botulinum D
str. 1873]
Length = 256
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 15/130 (11%)
Query: 10 AARRAIQYVVDGMTLGMGTGSTAKEFMILL---------------ADKIANGFRVQVIPS 54
A+ A +Y+ +G T+ +G S + L A K+ + ++
Sbjct: 83 VAKMAAKYIDNGDTIFIGGASIHYVLLKYLPMDKNYTVVTNSLTIAQKLKSLSNIETYIV 142
Query: 55 SRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIAHAASR 114
N +N + +D++ I ++ L + +K +A + R
Sbjct: 143 CGNIKNDEGVVDALATEFIRTLRIDVAFLTGGGISAKHGLSSATPEGAIFQKTVAEVSRR 202
Query: 115 FIVIGDESKR 124
I + + K
Sbjct: 203 KICLANFDKV 212
>gi|218133490|ref|ZP_03462294.1| hypothetical protein BACPEC_01357 [Bacteroides pectinophilus ATCC
43243]
gi|217990865|gb|EEC56871.1| hypothetical protein BACPEC_01357 [Bacteroides pectinophilus ATCC
43243]
Length = 248
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIA 44
K AR A + + G + + G+T + + K A
Sbjct: 79 DKKTAIARYAAKLITPGDFVYIDAGTTTGCMLDYITQKDA 118
>gi|215486581|ref|YP_002329012.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O127:H6 str. E2348/69]
gi|312966784|ref|ZP_07781002.1| deoR-like helix-turn-helix domain protein [Escherichia coli
2362-75]
gi|215264653|emb|CAS09024.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O127:H6 str. E2348/69]
gi|312288248|gb|EFR16150.1| deoR-like helix-turn-helix domain protein [Escherichia coli
2362-75]
Length = 249
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|157157058|ref|YP_001462584.1| DeoR family transcriptional regulator [Escherichia coli E24377A]
gi|157079088|gb|ABV18796.1| transcriptional regulator, DeoR family [Escherichia coli E24377A]
Length = 249
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|15801893|ref|NP_287913.1| putative DEOR-type transcriptional regulator [Escherichia coli
O157:H7 EDL933]
gi|15831111|ref|NP_309884.1| DEOR-type transcriptional regulator [Escherichia coli O157:H7 str.
Sakai]
gi|30062806|ref|NP_836977.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 2457T]
gi|74312344|ref|YP_310763.1| putative DeoR-type transcriptional regulator [Shigella sonnei
Ss046]
gi|82776649|ref|YP_402998.1| putative DEOR-type transcriptional regulator [Shigella dysenteriae
Sd197]
gi|110805287|ref|YP_688807.1| putative DeoR-type transcriptional regulator [Shigella flexneri 5
str. 8401]
gi|157160792|ref|YP_001458110.1| DeoR family transcriptional regulator [Escherichia coli HS]
gi|168749085|ref|ZP_02774107.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4113]
gi|168755956|ref|ZP_02780963.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4401]
gi|168762712|ref|ZP_02787719.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4501]
gi|168769357|ref|ZP_02794364.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4486]
gi|168775100|ref|ZP_02800107.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4196]
gi|168784033|ref|ZP_02809040.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4076]
gi|168788398|ref|ZP_02813405.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC869]
gi|168799585|ref|ZP_02824592.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC508]
gi|170020350|ref|YP_001725304.1| DeoR family transcriptional regulator [Escherichia coli ATCC 8739]
gi|170683876|ref|YP_001743898.1| DeoR family transcriptional regulator [Escherichia coli SMS-3-5]
gi|188495923|ref|ZP_03003193.1| transcriptional regulator, DeoR family [Escherichia coli 53638]
gi|191165049|ref|ZP_03026893.1| transcriptional regulator, DeoR family [Escherichia coli B7A]
gi|193062692|ref|ZP_03043786.1| transcriptional regulator, DeoR family [Escherichia coli E22]
gi|193067183|ref|ZP_03048152.1| transcriptional regulator, DeoR family [Escherichia coli E110019]
gi|194425986|ref|ZP_03058542.1| transcriptional regulator, DeoR family [Escherichia coli B171]
gi|194437135|ref|ZP_03069234.1| transcriptional regulator, DeoR family [Escherichia coli 101-1]
gi|195939720|ref|ZP_03085102.1| DeoR family transcriptional regulator [Escherichia coli O157:H7
str. EC4024]
gi|208811044|ref|ZP_03252877.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4206]
gi|208815491|ref|ZP_03256670.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4045]
gi|208821135|ref|ZP_03261455.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4042]
gi|209399633|ref|YP_002270341.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4115]
gi|217329323|ref|ZP_03445403.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. TW14588]
gi|218694859|ref|YP_002402526.1| DNA-binding transcriptional repressor, DeoR family [Escherichia
coli 55989]
gi|218699996|ref|YP_002407625.1| DeoR family DNA-binding transcriptional repressor [Escherichia coli
IAI39]
gi|218704811|ref|YP_002412330.1| DNA-binding transcriptional repressor [Escherichia coli UMN026]
gi|253773716|ref|YP_003036547.1| DeoR family transcriptional regulator [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161364|ref|YP_003044472.1| putative DNA-binding transcriptional regulator [Escherichia coli B
str. REL606]
gi|254792874|ref|YP_003077711.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. TW14359]
gi|256018467|ref|ZP_05432332.1| predicted DNA-binding transcriptional regulator [Shigella sp. D9]
gi|256023005|ref|ZP_05436870.1| predicted DNA-binding transcriptional regulator [Escherichia sp.
4_1_40B]
gi|260843632|ref|YP_003221410.1| putative DNA-binding transcriptional regulator [Escherichia coli
O103:H2 str. 12009]
gi|260854982|ref|YP_003228873.1| putative DNA-binding transcriptional regulator [Escherichia coli
O26:H11 str. 11368]
gi|261224269|ref|ZP_05938550.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. FRIK2000]
gi|261257475|ref|ZP_05950008.1| putative DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. FRIK966]
gi|291282373|ref|YP_003499191.1| putative DEOR-type transcriptional regulator [Escherichia coli
O55:H7 str. CB9615]
gi|293404826|ref|ZP_06648818.1| HTH-type transcriptional regulator yciT [Escherichia coli FVEC1412]
gi|293414616|ref|ZP_06657265.1| HTH-type transcriptional regulator yciT [Escherichia coli B185]
gi|297516109|ref|ZP_06934495.1| putative DEOR-type transcriptional regulator [Escherichia coli
OP50]
gi|298380468|ref|ZP_06990067.1| HTH-type transcriptional regulator yciT [Escherichia coli FVEC1302]
gi|300822550|ref|ZP_07102689.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300897344|ref|ZP_07115774.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|300904933|ref|ZP_07122751.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300926670|ref|ZP_07142446.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300927794|ref|ZP_07143358.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300935384|ref|ZP_07150383.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|300948362|ref|ZP_07162468.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|300954533|ref|ZP_07166979.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|301017632|ref|ZP_07182306.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|301022762|ref|ZP_07186606.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|301304372|ref|ZP_07210485.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|301326987|ref|ZP_07220276.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|301647219|ref|ZP_07247038.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|306813690|ref|ZP_07447871.1| putative DEOR-type transcriptional regulator [Escherichia coli
NC101]
gi|307137925|ref|ZP_07497281.1| putative DEOR-type transcriptional regulator [Escherichia coli
H736]
gi|307309961|ref|ZP_07589611.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|309793241|ref|ZP_07687668.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|331641847|ref|ZP_08342982.1| regulatory protein, DeoR family [Escherichia coli H736]
gi|331652328|ref|ZP_08353347.1| regulatory protein, DeoR family [Escherichia coli M718]
gi|331662699|ref|ZP_08363622.1| regulatory protein, DeoR family [Escherichia coli TA143]
gi|331667672|ref|ZP_08368536.1| regulatory protein, DeoR family [Escherichia coli TA271]
gi|331672813|ref|ZP_08373599.1| regulatory protein, DeoR family [Escherichia coli TA280]
gi|331677066|ref|ZP_08377762.1| regulatory protein, DeoR family [Escherichia coli H591]
gi|331682773|ref|ZP_08383392.1| regulatory protein, DeoR family [Escherichia coli H299]
gi|332279520|ref|ZP_08391933.1| conserved hypothetical protein [Shigella sp. D9]
gi|12515505|gb|AAG56529.1|AE005378_8 putative DEOR-type transcriptional regulator [Escherichia coli
O157:H7 str. EDL933]
gi|13361322|dbj|BAB35280.1| putative DEOR-type transcriptional regulator [Escherichia coli
O157:H7 str. Sakai]
gi|30041054|gb|AAP16784.1| putative DEOR-type transcriptional regulator [Shigella flexneri 2a
str. 2457T]
gi|73855821|gb|AAZ88528.1| putative DEOR-type transcriptional regulator [Shigella sonnei
Ss046]
gi|81240797|gb|ABB61507.1| putative DEOR-type transcriptional regulator [Shigella dysenteriae
Sd197]
gi|110614835|gb|ABF03502.1| putative DEOR-type transcriptional regulator [Shigella flexneri 5
str. 8401]
gi|157066472|gb|ABV05727.1| transcriptional regulator, DeoR family [Escherichia coli HS]
gi|169755278|gb|ACA77977.1| transcriptional regulator, DeoR family [Escherichia coli ATCC 8739]
gi|170521594|gb|ACB19772.1| transcriptional regulator, DeoR family [Escherichia coli SMS-3-5]
gi|187769234|gb|EDU33078.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4196]
gi|188016581|gb|EDU54703.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4113]
gi|188491122|gb|EDU66225.1| transcriptional regulator, DeoR family [Escherichia coli 53638]
gi|188998724|gb|EDU67710.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4076]
gi|189356758|gb|EDU75177.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4401]
gi|189361527|gb|EDU79946.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4486]
gi|189367037|gb|EDU85453.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4501]
gi|189371852|gb|EDU90268.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC869]
gi|189377992|gb|EDU96408.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC508]
gi|190904821|gb|EDV64526.1| transcriptional regulator, DeoR family [Escherichia coli B7A]
gi|192931814|gb|EDV84414.1| transcriptional regulator, DeoR family [Escherichia coli E22]
gi|192959773|gb|EDV90207.1| transcriptional regulator, DeoR family [Escherichia coli E110019]
gi|194416041|gb|EDX32307.1| transcriptional regulator, DeoR family [Escherichia coli B171]
gi|194424118|gb|EDX40106.1| transcriptional regulator, DeoR family [Escherichia coli 101-1]
gi|208724550|gb|EDZ74258.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4206]
gi|208732139|gb|EDZ80827.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4045]
gi|208741258|gb|EDZ88940.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4042]
gi|209161033|gb|ACI38466.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. EC4115]
gi|209771858|gb|ACI84241.1| putative DEOR-type transcriptional regulator [Escherichia coli]
gi|209771860|gb|ACI84242.1| putative DEOR-type transcriptional regulator [Escherichia coli]
gi|209771862|gb|ACI84243.1| putative DEOR-type transcriptional regulator [Escherichia coli]
gi|209771864|gb|ACI84244.1| putative DEOR-type transcriptional regulator [Escherichia coli]
gi|209771866|gb|ACI84245.1| putative DEOR-type transcriptional regulator [Escherichia coli]
gi|217317762|gb|EEC26190.1| transcriptional regulator, DeoR family [Escherichia coli O157:H7
str. TW14588]
gi|218351591|emb|CAU97303.1| DNA-binding transcriptional repressor, DeoR family [Escherichia
coli 55989]
gi|218369982|emb|CAR17756.1| DNA-binding transcriptional repressor, DeoR family [Escherichia
coli IAI39]
gi|218431908|emb|CAR12793.1| DNA-binding transcriptional repressor, DeoR family [Escherichia
coli UMN026]
gi|253324760|gb|ACT29362.1| transcriptional regulator, DeoR family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973265|gb|ACT38936.1| predicted DNA-binding transcriptional regulator [Escherichia coli B
str. REL606]
gi|253977479|gb|ACT43149.1| predicted DNA-binding transcriptional regulator [Escherichia coli
BL21(DE3)]
gi|254592274|gb|ACT71635.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O157:H7 str. TW14359]
gi|257753631|dbj|BAI25133.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O26:H11 str. 11368]
gi|257758779|dbj|BAI30276.1| predicted DNA-binding transcriptional regulator [Escherichia coli
O103:H2 str. 12009]
gi|281600708|gb|ADA73692.1| putative Transcriptional regulator [Shigella flexneri 2002017]
gi|284921166|emb|CBG34232.1| DeoR-family transcriptional regulator [Escherichia coli 042]
gi|290762246|gb|ADD56207.1| putative DEOR-type transcriptional regulator [Escherichia coli
O55:H7 str. CB9615]
gi|291427034|gb|EFF00061.1| HTH-type transcriptional regulator yciT [Escherichia coli FVEC1412]
gi|291434674|gb|EFF07647.1| HTH-type transcriptional regulator yciT [Escherichia coli B185]
gi|298277910|gb|EFI19424.1| HTH-type transcriptional regulator yciT [Escherichia coli FVEC1302]
gi|299881111|gb|EFI89322.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 196-1]
gi|300318443|gb|EFJ68227.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 175-1]
gi|300358894|gb|EFJ74764.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 198-1]
gi|300400126|gb|EFJ83664.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 69-1]
gi|300403082|gb|EFJ86620.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 84-1]
gi|300417336|gb|EFK00647.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 182-1]
gi|300452123|gb|EFK15743.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 116-1]
gi|300459414|gb|EFK22907.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 21-1]
gi|300464187|gb|EFK27680.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 187-1]
gi|300524966|gb|EFK46035.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 119-7]
gi|300840359|gb|EFK68119.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 124-1]
gi|300846370|gb|EFK74130.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 78-1]
gi|301074581|gb|EFK89387.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 146-1]
gi|305852964|gb|EFM53409.1| putative DEOR-type transcriptional regulator [Escherichia coli
NC101]
gi|306909679|gb|EFN40173.1| transcriptional regulator, DeoR family [Escherichia coli W]
gi|308122828|gb|EFO60090.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 145-7]
gi|309701584|emb|CBJ00891.1| DeoR-family transcriptional regulator [Escherichia coli ETEC
H10407]
gi|313848616|emb|CAQ31789.2| DNA-binding transcriptional regulator [Escherichia coli BL21(DE3)]
gi|315254324|gb|EFU34292.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 85-1]
gi|320189962|gb|EFW64614.1| Transcriptional regulatory protein YciT [Escherichia coli O157:H7
str. EC1212]
gi|320199321|gb|EFW73912.1| Transcriptional regulatory protein YciT [Escherichia coli EC4100B]
gi|320637181|gb|EFX07007.1| putative DEOR-type transcriptional regulator [Escherichia coli
O157:H7 str. G5101]
gi|320642547|gb|EFX11795.1| putative DEOR-type transcriptional regulator [Escherichia coli
O157:H- str. 493-89]
gi|320647900|gb|EFX16608.1| putative DEOR-type transcriptional regulator [Escherichia coli
O157:H- str. H 2687]
gi|320653502|gb|EFX21607.1| putative DEOR-type transcriptional regulator [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320659202|gb|EFX26791.1| putative DEOR-type transcriptional regulator [Escherichia coli
O55:H7 str. USDA 5905]
gi|320663995|gb|EFX31182.1| putative DEOR-type transcriptional regulator [Escherichia coli
O157:H7 str. LSU-61]
gi|323153282|gb|EFZ39540.1| deoR-like helix-turn-helix domain protein [Escherichia coli
EPECa14]
gi|323378901|gb|ADX51169.1| transcriptional regulator, DeoR family [Escherichia coli KO11]
gi|323947433|gb|EGB43437.1| deoR family protein Bacterial regulatory protein [Escherichia coli
H120]
gi|323962586|gb|EGB58166.1| deoR family protein regulatory protein [Escherichia coli H489]
gi|323973474|gb|EGB68660.1| deoR family protein regulatory protein [Escherichia coli TA007]
gi|324006101|gb|EGB75320.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 57-2]
gi|324018895|gb|EGB88114.1| DeoR-like helix-turn-helix protein [Escherichia coli MS 117-3]
gi|324117522|gb|EGC11428.1| deoR family protein regulatory protein [Escherichia coli E1167]
gi|326341053|gb|EGD64846.1| Transcriptional regulatory protein YciT [Escherichia coli O157:H7
str. 1125]
gi|326343293|gb|EGD67060.1| Transcriptional regulatory protein YciT [Escherichia coli O157:H7
str. 1044]
gi|331038645|gb|EGI10865.1| regulatory protein, DeoR family [Escherichia coli H736]
gi|331050606|gb|EGI22664.1| regulatory protein, DeoR family [Escherichia coli M718]
gi|331061121|gb|EGI33085.1| regulatory protein, DeoR family [Escherichia coli TA143]
gi|331065257|gb|EGI37152.1| regulatory protein, DeoR family [Escherichia coli TA271]
gi|331070034|gb|EGI41403.1| regulatory protein, DeoR family [Escherichia coli TA280]
gi|331075755|gb|EGI47053.1| regulatory protein, DeoR family [Escherichia coli H591]
gi|331080404|gb|EGI51583.1| regulatory protein, DeoR family [Escherichia coli H299]
gi|332101872|gb|EGJ05218.1| conserved hypothetical protein [Shigella sp. D9]
gi|332342879|gb|AEE56213.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332759292|gb|EGJ89600.1| deoR-like helix-turn-helix domain protein [Shigella flexneri
2747-71]
gi|332767521|gb|EGJ97715.1| DNA-binding transcriptional regulator [Shigella flexneri 2930-71]
Length = 249
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|16129245|ref|NP_415800.1| global regulator of transcription; DeoR family [Escherichia coli
str. K-12 substr. MG1655]
gi|89108130|ref|AP_001910.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. W3110]
gi|170080963|ref|YP_001730283.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
substr. DH10B]
gi|238900519|ref|YP_002926315.1| putative DNA-binding transcriptional regulator [Escherichia coli
BW2952]
gi|3183243|sp|P76034|YCIT_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator
yciT
gi|1787540|gb|AAC74366.1| global regulator of transcription; DeoR family [Escherichia coli
str. K-12 substr. MG1655]
gi|85674892|dbj|BAA14838.2| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K12 substr. W3110]
gi|169888798|gb|ACB02505.1| predicted DNA-binding transcriptional regulator [Escherichia coli
str. K-12 substr. DH10B]
gi|238862264|gb|ACR64262.1| predicted DNA-binding transcriptional regulator [Escherichia coli
BW2952]
gi|260449584|gb|ACX40006.1| transcriptional regulator, DeoR family [Escherichia coli DH1]
gi|315135922|dbj|BAJ43081.1| putative DNA-binding transcriptional regulator [Escherichia coli
DH1]
Length = 249
Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|49478950|ref|YP_037784.1| DeoR family transcriptional regulator [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|196034189|ref|ZP_03101599.1| transcriptional regulator, DeoR family [Bacillus cereus W]
gi|196038366|ref|ZP_03105675.1| transcriptional regulator, DeoR family [Bacillus cereus NVH0597-99]
gi|218904844|ref|YP_002452678.1| transcriptional regulator, DeoR family [Bacillus cereus AH820]
gi|49330506|gb|AAT61152.1| transcriptional regulator, DeoR family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|195993263|gb|EDX57221.1| transcriptional regulator, DeoR family [Bacillus cereus W]
gi|196030774|gb|EDX69372.1| transcriptional regulator, DeoR family [Bacillus cereus NVH0597-99]
gi|218540035|gb|ACK92433.1| transcriptional regulator, DeoR family [Bacillus cereus AH820]
Length = 250
Score = 34.9 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 77 QIKQQIAKYAASVVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 196 TLANEGYFLIDESKFSEVAFAKIANVE 222
>gi|52141770|ref|YP_085060.1| DeoR family transcriptional regulator [Bacillus cereus E33L]
gi|196044691|ref|ZP_03111926.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB108]
gi|222097174|ref|YP_002531231.1| transcriptional regulator, deor family [Bacillus cereus Q1]
gi|225865693|ref|YP_002751071.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB102]
gi|51975239|gb|AAU16789.1| transcriptional regulator, DeoR family [Bacillus cereus E33L]
gi|196024726|gb|EDX63398.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB108]
gi|221241232|gb|ACM13942.1| transcriptional regulator, DeoR family [Bacillus cereus Q1]
gi|225786423|gb|ACO26640.1| transcriptional regulator, DeoR family [Bacillus cereus 03BB102]
Length = 250
Score = 34.9 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 16/147 (10%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADK---------------IANGFRV 49
Q+K+ A+ A V G + + GST E + L +K + N R
Sbjct: 77 QIKQQIAKYAASVVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRA 136
Query: 50 QVIPSSRNTENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLREKIIA 109
++ + I + S + D G + + +L L +++
Sbjct: 137 YLLGGMMKSRTKALIGAMAQESMQKY-RFDKCFLGANGVHEQLGFTTPDPEEALLKQMAL 195
Query: 110 HAASRFIVIGDESKRVDFLGRGMLPIE 136
A+ + DESK + + +E
Sbjct: 196 TLANEGYFLIDESKFSEVAFAKIANVE 222
>gi|253734387|ref|ZP_04868552.1| sugar metabolism transcriptional repressor [Staphylococcus aureus
subsp. aureus TCH130]
gi|257423687|ref|ZP_05600116.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426364|ref|ZP_05602766.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429006|ref|ZP_05605393.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
68-397]
gi|257431652|ref|ZP_05608015.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
E1410]
gi|257434611|ref|ZP_05610662.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
M876]
gi|258422649|ref|ZP_05685554.1| regulatory protein DeoR [Staphylococcus aureus A9635]
gi|282902102|ref|ZP_06309995.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus C160]
gi|282906544|ref|ZP_06314392.1| DeoR family transcriptional regulator lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909511|ref|ZP_06317324.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911763|ref|ZP_06319559.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915049|ref|ZP_06322826.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus M899]
gi|282917544|ref|ZP_06325296.1| DeoR family transcriptional regulator [Staphylococcus aureus subsp.
aureus D139]
gi|282920776|ref|ZP_06328494.1| DeoR family transcriptional regulator, lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
C427]
gi|282925681|ref|ZP_06333329.1| DeoR family transcriptional regulator, lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
C101]
gi|283767294|ref|ZP_06340209.1| DeoR family transcriptional regulator lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
H19]
gi|283958974|ref|ZP_06376417.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293497458|ref|ZP_06665312.1| DeoR family transcriptional regulator, lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
58-424]
gi|293511029|ref|ZP_06669726.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus M809]
gi|293549635|ref|ZP_06672307.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus M1015]
gi|297589731|ref|ZP_06948372.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus MN8]
gi|253727617|gb|EES96346.1| sugar metabolism transcriptional repressor [Staphylococcus aureus
subsp. aureus TCH130]
gi|257272705|gb|EEV04807.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275995|gb|EEV07446.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279487|gb|EEV10074.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
68-397]
gi|257282531|gb|EEV12663.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
E1410]
gi|257285207|gb|EEV15323.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
M876]
gi|257847060|gb|EEV71069.1| regulatory protein DeoR [Staphylococcus aureus A9635]
gi|282312510|gb|EFB42914.1| DeoR family transcriptional regulator, lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
C101]
gi|282315191|gb|EFB45575.1| DeoR family transcriptional regulator, lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
C427]
gi|282318506|gb|EFB48864.1| DeoR family transcriptional regulator [Staphylococcus aureus subsp.
aureus D139]
gi|282320770|gb|EFB51104.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus M899]
gi|282323459|gb|EFB53775.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326621|gb|EFB56921.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329443|gb|EFB58964.1| DeoR family transcriptional regulator lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596561|gb|EFC01520.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus C160]
gi|283461173|gb|EFC08257.1| DeoR family transcriptional regulator lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
H19]
gi|283789533|gb|EFC28358.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290918682|gb|EFD95758.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus M1015]
gi|291096389|gb|EFE26647.1| DeoR family transcriptional regulator, lactose phosphotransferase
system repressor [Staphylococcus aureus subsp. aureus
58-424]
gi|291466016|gb|EFF08545.1| lactose phosphotransferase system repressor [Staphylococcus aureus
subsp. aureus M809]
gi|297578242|gb|EFH96955.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus MN8]
gi|312437386|gb|ADQ76457.1| lactose PTS family porter repressor [Staphylococcus aureus subsp.
aureus TCH60]
Length = 263
Score = 34.9 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 3 ALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMIL 38
+ KR AR+A + DG TL G G+T +
Sbjct: 88 QIAEKRFIARKAASLIEDGDTLFFGPGTTVELLAEE 123
>gi|323964625|gb|EGB60098.1| deoR family protein regulatory protein [Escherichia coli M863]
Length = 249
Score = 34.9 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 1 MDALQMKRNAARRAIQYVVDGMTLGMGTGSTAKEFMILLADKIANGFRVQVIP 53
M +KR A A V G T+ + GS+ L ++ N + V
Sbjct: 67 MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSS 119
>gi|238763570|ref|ZP_04624531.1| Glucitol operon repressor [Yersinia kristensenii ATCC 33638]
gi|238698202|gb|EEP90958.1| Glucitol operon repressor [Yersinia kristensenii ATCC 33638]
Length = 256
Score = 34.9 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 24/140 (17%)
Query: 5 QMKRNAARRAIQYVVDGMTLGMGTGSTA-------------------KEFMILLADKIAN 45
+ K+ A+ A + + DG +L GST + L + +
Sbjct: 76 EKKKQIAKAASKLIKDGDSLVFDAGSTVLQMVPHLTKFNNITVMTNSLHIVNELVELDND 135
Query: 46 GFRVQVIPSSRN-TENFCKIHHIPLHSPEDVSSVDLSIDGFDEIDSRLRLIKGYGGALLR 104
+ + R + +F + + DG D + +
Sbjct: 136 QTILMPGGTYRKGSASFHGSLAESAFDNFSFDKLFIGADGVDI----KAGVTTFNEVYHV 191
Query: 105 EKIIAHAASRFIVIGDESKR 124
+ HAASR I++ D SK
Sbjct: 192 STAMCHAASRIILLVDSSKF 211
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.152 0.459
Lambda K H
0.267 0.0465 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,284,916,102
Number of Sequences: 14124377
Number of extensions: 111411627
Number of successful extensions: 336916
Number of sequences better than 10.0: 3609
Number of HSP's better than 10.0 without gapping: 2992
Number of HSP's successfully gapped in prelim test: 617
Number of HSP's that attempted gapping in prelim test: 328962
Number of HSP's gapped (non-prelim): 3760
length of query: 231
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 97
effective length of database: 2,950,127,112
effective search space: 286162329864
effective search space used: 286162329864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 79 (34.9 bits)