HHsearch alignment for GI: 254781055 and conserved domain: COG1148

Probab=99.36  E-value=1.3e-12  Score=111.60  Aligned_cols=189  Identities=21%  Similarity=0.264  Sum_probs=104.1

Q ss_pred             CEEEEEEEECCCCCEEEEEEC---C---CCCCCCCCC--------------CCC--CCCCCCCCCCC---CCCC--CCCH
Q ss_conf             100111232277640233203---7---622112378--------------511--23333443212---3454--5301
Q gi|254781055|r  130 TITSRYIVVSTGGSPNRMDFK---G---SDLCITSDE--------------IFS--LKSLPQSTLII---GGGY--IAVE  182 (461)
Q Consensus       130 ~i~a~~iiIATGs~p~~p~i~---g---~~~~~ts~~--------------~~~--l~~~P~~i~Ii---GgG~--ig~E  182 (461)
T Consensus       298 e~~vGaIIvAtGy~~~Da~~k~EyGYG~~~nVIT~lElErml~~~GPT~GkvlrpSdg~~PkrVaFIqCVGSRD~~~~n~  377 (622)
T COG1148         298 ELEVGAIIVATGYKPFDATRKEEYGYGKYPNVITNLELERMLNPNGPTGGKVLRPSDGKPPKRVAFIQCVGSRDFQVGNP  377 (622)
T ss_pred             EEEECEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf             99715299972465557100433388877444447899987355799886177137999874689999614656666882


Q ss_pred             H------------HHHHHC-C-CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC-CCCCCCEEEEE
Q ss_conf             1------------244210-1-2210000011112222223212222222222233233220001102-44576102431
Q gi|254781055|r  183 F------------AGILNS-L-GSKTTLVTRGNSILSKFDSDIRQGLTDVMISRGMQVFHNDTIESVV-SESGQLKSILK  247 (461)
Q Consensus       183 ~------------A~~~~~-l-G~~Vtli~~~~~~l~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~-~~~~~~~~~~~  247 (461)
T Consensus       378 YCSrvCCm~slKqA~~Iker~Pd~~v~I~YmDiRafG~~yEe---fY~~~Q~~~GV~fIRGr-vaeI~e~p~~~liV~~E  453 (622)
T COG1148         378 YCSRVCCMVSLKQAQLIKERYPDTDVTIYYMDIRAFGKDYEE---FYVRSQEDYGVRFIRGR-VAEIAEFPKKKLIVRVE  453 (622)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH---HHHHHHHHHCCEEECCC-EEEEEECCCCCEEEEEE
T ss_conf             244899999987789988758985389999971246642699---99987886085366464-10168879983699986


Q ss_pred             C---C--CCCCCCCCEECCCCEEE--ECCCCCCCCCCCCCCCCCCCCC-CCC---CCCEEEEEEECCCCCCCCCCCHHHC
Q ss_conf             2---7--53222210000152220--0126841123211235433445-743---0000355871254326431000000
Q gi|254781055|r  248 S---G--KIVKTDQVILAVGRTPR--TTGIGLEKVGVKMDENGFIITD-CYS---RTNVQSIFSLGDISGHIQLTPVAIH  316 (461)
Q Consensus       248 ~---g--~~~~~D~vl~a~Gr~Pn--~~~l~L~~~gi~~~~~G~i~vd-~~~---~Ts~~~IyA~GDv~g~~~l~~~A~~  316 (461)
T Consensus       454 dTl~g~~~e~~~DLVVLa~Gmep~~g~~ki-a~iLgL~~~~~gF~k~~hPkl~pv~s~~~GIflAG~aqg-PkdI~~sia  531 (622)
T COG1148         454 DTLTGEVKEIEADLVVLATGMEPSEGAKKI-AKILGLSQDEDGFLKEAHPKLRPVDSNRDGIFLAGAAQG-PKDIADSIA  531 (622)
T ss_pred             ECCCCCEECCCCCEEEEEECCCCCCCHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC-CCCHHHHHH
T ss_conf             034673111233379995044457656888-875486517877603478776645556785798100369-842778887


Q ss_pred             CCCCCHHH
Q ss_conf             11110122
Q gi|254781055|r  317 AAACFVET  324 (461)
Q Consensus       317 ~g~~aa~~  324 (461)
T Consensus       532 qa~aAA~k  539 (622)
T COG1148         532 QAKAAAAK  539 (622)
T ss_pred             HHHHHHHH
T ss_conf             76788998