HHsearch alignment for GI: 254781055 and conserved domain: COG1252

Probab=97.72  E-value=2e-05  Score=58.66  Aligned_cols=100  Identities=23%  Similarity=0.342  Sum_probs=71.4

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCC--CCCCCEECCCCCCC--CCC---------CCCCCCCCCCCCCCCC-CCCCCCCEEE
Q ss_conf             34432123454530112442101--22100000111122--222---------2321222222222223-3233220001
Q gi|254781055|r  168 PQSTLIIGGGYIAVEFAGILNSL--GSKTTLVTRGNSIL--SKF---------DSDIRQGLTDVMISRG-MQVFHNDTIE  233 (461)
Q Consensus       168 P~~i~IiGgG~ig~E~A~~~~~l--G~~Vtli~~~~~~l--~~~---------d~~~~~~~~~~l~~~G-v~i~~~~~v~  233 (461)
T Consensus         3 ~~~iVIlGgGfgGl~~a~~l~~~~~~~~itLVd~~~~hl~~plL~eva~g~l~~~~i~~p~~~~~~~~~~v~~~~~-~V~   81 (405)
T COG1252           3 KKRIVILGGGFGGLSAAKRLARKLPDVEITLVDRRDYHLFTPLLYEVATGTLSESEIAIPLRALLRKSGNVQFVQG-EVT   81 (405)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHEECCHHHHHCCCCCEEEEEE-EEE
T ss_conf             7569998986799999997641678871899918876666303355632877756521308998423574489997-899


Q ss_pred             ECCCCCCCCEEEEECCCCCCCCCCEECCCCEEEECCC
Q ss_conf             1024457610243127532222100001522200126
Q gi|254781055|r  234 SVVSESGQLKSILKSGKIVKTDQVILAVGRTPRTTGI  270 (461)
Q Consensus       234 ~i~~~~~~~~~~~~~g~~~~~D~vl~a~Gr~Pn~~~l  270 (461)
T Consensus        82 ~ID~~~--k~V~~~~~~~i~YD~LVvalGs~~~~fgi  116 (405)
T COG1252          82 DIDRDA--KKVTLADLGEISYDYLVVALGSETNYFGI  116 (405)
T ss_pred             EECCCC--CEEEECCCCCCCCCEEEEECCCCCCCCCC
T ss_conf             971567--98995788702363899945876676899