HHsearch alignment for GI: 254781055 and conserved domain: KOG0399
>KOG0399 consensus.
Probab=96.74 E-value=0.0004 Score=49.18 Aligned_cols=86 Identities=26% Similarity=0.349 Sum_probs=63.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 4432123454530112442101221000001111222-------2--223212222222222233233220001102445
Q gi|254781055|r 169 QSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILS-------K--FDSDIRQGLTDVMISRGMQVFHNDTIESVVSES 239 (461)
Q Consensus 169 ~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~-------~--~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~ 239 (461)
T Consensus 1786 ~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~ygipnmkldk~vv~rrv~ll~~egi~f~tn~eigk~vs-- 1863 (2142)
T KOG0399 1786 KRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMYGIPNMKLDKFVVQRRVDLLEQEGIRFVTNTEIGKHVS-- 1863 (2142)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC--
T ss_conf 479997468414668999864476799997157767456616875213279999999998861854885032256556--
Q ss_pred CCCEEEEECCCCCCCCCCEECCCC
Q ss_conf 761024312753222210000152
Q gi|254781055|r 240 GQLKSILKSGKIVKTDQVILAVGR 263 (461)
Q Consensus 240 ~~~~~~~~~g~~~~~D~vl~a~Gr 263 (461)
T Consensus 1864 -------~d~l~~~~daiv~a~gs 1880 (2142)
T KOG0399 1864 -------LDELKKENDAIVLATGS 1880 (2142)
T ss_pred -------HHHHHHCCCEEEEEECC
T ss_conf -------78875305759998278