HHsearch alignment for GI: 254781055 and conserved domain: KOG0399

>KOG0399 consensus.
Probab=96.74  E-value=0.0004  Score=49.18  Aligned_cols=86  Identities=26%  Similarity=0.349  Sum_probs=63.6

Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf             4432123454530112442101221000001111222-------2--223212222222222233233220001102445
Q gi|254781055|r  169 QSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILS-------K--FDSDIRQGLTDVMISRGMQVFHNDTIESVVSES  239 (461)
Q Consensus       169 ~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~-------~--~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~  239 (461)
T Consensus      1786 ~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~ygipnmkldk~vv~rrv~ll~~egi~f~tn~eigk~vs-- 1863 (2142)
T KOG0399        1786 KRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMYGIPNMKLDKFVVQRRVDLLEQEGIRFVTNTEIGKHVS-- 1863 (2142)
T ss_pred             CEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC--
T ss_conf             479997468414668999864476799997157767456616875213279999999998861854885032256556--


Q ss_pred             CCCEEEEECCCCCCCCCCEECCCC
Q ss_conf             761024312753222210000152
Q gi|254781055|r  240 GQLKSILKSGKIVKTDQVILAVGR  263 (461)
Q Consensus       240 ~~~~~~~~~g~~~~~D~vl~a~Gr  263 (461)
T Consensus      1864 -------~d~l~~~~daiv~a~gs 1880 (2142)
T KOG0399        1864 -------LDELKKENDAIVLATGS 1880 (2142)
T ss_pred             -------HHHHHHCCCEEEEEECC
T ss_conf             -------78875305759998278