HHsearch alignment for GI: 254781055 and conserved domain: KOG1346
>KOG1346 consensus.
Probab=99.87 E-value=2.4e-23 Score=190.36 Aligned_cols=402 Identities=18% Similarity=0.207 Sum_probs=239.9
Q ss_pred CCEEEECCCHHHHHHH--HHHHHCCCCEEEEECC-CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH
Q ss_conf 4689988986799999--9999889929999778-786146435682708899999999999841017736377544999
Q gi|254781055|r 5 YDLVVIGAGSSGVRSA--RLAAQLGKKVAICEEY-RVGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQ 81 (461)
Q Consensus 5 yDvvIIG~GpaG~~aA--~~la~~g~kV~liE~~-~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~ 81 (461)
T Consensus 179 vp~liigggtaAfaa~rai~s~da~A~vl~iseepelP---YmR-PPLSKELW~~~dpn-~~k~lrfkqwsGkeRsiffe 253 (659)
T KOG1346 179 VPYLIIGGGTAAFAAFRAIKSNDATAKVLMISEEPELP---YMR-PPLSKELWWYGDPN-SAKKLRFKQWSGKERSIFFE 253 (659)
T ss_pred CCEEEECCCCHHHHCCCCCCCCCCCCEEEEECCCCCCC---CCC-CCCCHHCEECCCCC-HHHHEEECCCCCCCCEEEEC
T ss_conf 85567737734432045665678873588603676776---568-97442113569997-15404301047864315755
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC-CC--CCCCCCCCCCCCEEEEEEEECCCCCEEEEEEC-CC-----
Q ss_conf 99999999998554668864300332001223322-22--22222223221100111232277640233203-76-----
Q gi|254781055|r 82 SLITAQNKELSRLESFYHNRLESAGVEIFASKGIL-SS--PHSVYIANLNRTITSRYIVVSTGGSPNRMDFK-GS----- 152 (461)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~-~~--~~~v~V~~~~~~i~a~~iiIATGs~p~~p~i~-g~----- 152 (461)
T Consensus 254 p-----d~Ff--vspeDLp~~~nGGvAvl~G~kvvkid~~d~~V~L-nDG~~I~YdkcLIATG~~Pk~l~~~~~A~~evk 325 (659)
T KOG1346 254 P-----DGFF--VSPEDLPKAVNGGVAVLRGRKVVKIDEEDKKVIL-NDGTTIGYDKCLIATGVRPKKLQVFEEASEEVK 325 (659)
T ss_pred C-----CCCE--ECHHHCCCCCCCCEEEEECCCEEEEECCCCEEEE-CCCCEEEHHHEEEECCCCCCCCHHHHHCCHHHH
T ss_conf 8-----8504--4857774002685689734504786100076882-278572121046532777664156564388766
Q ss_pred CC---CCCCCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHC----CCCCCCEECC----CCCCCCCCCCCCCCCCCCC
Q ss_conf 22---1123785112333---3443212345453011244210----1221000001----1112222223212222222
Q gi|254781055|r 153 DL---CITSDEIFSLKSL---PQSTLIIGGGYIAVEFAGILNS----LGSKTTLVTR----GNSILSKFDSDIRQGLTDV 218 (461)
Q Consensus 153 ~~---~~ts~~~~~l~~~---P~~i~IiGgG~ig~E~A~~~~~----lG~~Vtli~~----~~~~l~~~d~~~~~~~~~~ 218 (461)
T Consensus 326 ~kit~fr~p~DF~rlek~~aek~siTIiGnGflgSELacsl~rk~r~~g~eV~QvF~Ek~nm~kiLPe---yls~wt~ek 402 (659)
T KOG1346 326 QKITYFRYPADFKRLEKGLAEKQSITIIGNGFLGSELACSLKRKYRNEGVEVHQVFEEKYNMEKILPE---YLSQWTIEK 402 (659)
T ss_pred HHEEEEECCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH---HHHHHHHHH
T ss_conf 22566745327889987652222589975750145678788776620684899840012876665178---887888999
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCEEE
Q ss_conf 2222332332200011024457610243127532222100001522200126841123211235-433445743000035
Q gi|254781055|r 219 MISRGMQVFHNDTIESVVSESGQLKSILKSGKIVKTDQVILAVGRTPRTTGIGLEKVGVKMDEN-GFIITDCYSRTNVQS 297 (461)
Q Consensus 219 l~~~Gv~i~~~~~v~~i~~~~~~~~~~~~~g~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~~-G~i~vd~~~~Ts~~~ 297 (461)
T Consensus 403 ir~~GV~V~pna~v~sv~~~~~nl~lkL~dG~~l~tD~vVvavG~ePN~el--a~~sgLeiD~~lGGfrvnaeL~a-r~N 479 (659)
T KOG1346 403 IRKGGVDVRPNAKVESVRKCCKNLVLKLSDGSELRTDLVVVAVGEEPNSEL--AEASGLEIDEKLGGFRVNAELKA-REN 479 (659)
T ss_pred HHHCCCEECCCHHHHHHHHCCCCEEEEECCCCEEEECEEEEEECCCCCHHH--CCCCCCEECCCCCCEEEEHEEEC-CCC
T ss_conf 985694125410246665202126899258876451359998357886433--04567155000376774120001-543
Q ss_pred EEEECCCCCC-------CCCCC--HHHCCCCCCHHHHCCCCCCC-----C--------CCC-------CCCCC-EEEHHH
Q ss_conf 5871254326-------43100--00001111012205887543-----3--------233-------33331-230688
Q gi|254781055|r 298 IFSLGDISGH-------IQLTP--VAIHAAACFVETVFKDNPTI-----P--------DYD-------LVPTA-VFSKPE 347 (461)
Q Consensus 298 IyA~GDv~g~-------~~l~~--~A~~~g~~aa~~i~~~~~~~-----~--------~~~-------~ip~~-ift~pe 347 (461)
T Consensus 480 vwvAGdaacF~D~~LGrRRVehhdhavvSGRLAGENMtgAakpy~hqsmFWsdlgP~igyeaIGlvDSSLpTVgVfA~p~ 559 (659)
T KOG1346 480 VWVAGDAACFEDGVLGRRRVEHHDHAVVSGRLAGENMTGAAKPYKHQSMFWSDLGPEIGYEAIGLVDSSLPTVGVFALPS 559 (659)
T ss_pred EEEECCHHHHHCCCCCCEECCCCCCCEEECEECCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCEEEECCC
T ss_conf 36504244540531110000324432450200265444456876444502536886346112200036787414553365
Q ss_pred HHHHCCCHHHHHHC-CCCEEEEEEEECCCHHHH------------HCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHH
Q ss_conf 75516898899854-994799998303136687------------47998407999997899869999998199889999
Q gi|254781055|r 348 IASVGLTEEEAVQK-FCRLEIYKTKFFPMKCFL------------SKRFEHTIMKIIVHADNHKVLGVHILGHEASEIIQ 414 (461)
Q Consensus 348 iA~VG~te~~a~~~-~~~~~v~~~~~~~~~~~~------------~~~~~~g~~kli~~~~~~~iLG~~~vg~~A~elI~ 414 (461)
T Consensus 560 s---~~~~~~~se~sdt~v~~~s~s~s~ss~~~~~~s~~~v~~~P~e~~~ygK-gViFYl~d~~iVGilLwN~F--nr~~ 633 (659)
T KOG1346 560 S---ATRVDQLSESSDTDVPETSTSSSQSSKSDAGASQDGVTCDPDEAGNYGK-GVIFYLKDDKIVGILLWNLF--NRIG 633 (659)
T ss_pred C---CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCCCEEEEEEHHHH--CCCH
T ss_conf 3---4460232221588886654543322234577678887668421245673-48999628948999854531--5530
Q ss_pred HHHHHHHCCCCHHHHHC
Q ss_conf 99999986798789963
Q gi|254781055|r 415 VLGVCLKAGCVKKDFDR 431 (461)
Q Consensus 415 ~~~~ai~~~~t~~~l~~ 431 (461)
T Consensus 634 ~AR~II~d~kk~ddlnE 650 (659)
T KOG1346 634 LARTIINDNKKYDDLNE 650 (659)
T ss_pred HHHHHHCCCCCHHHHHH
T ss_conf 66887505521256899