HHsearch alignment for GI: 254781055 and conserved domain: PRK05192
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated.
Probab=98.91 E-value=1.8e-08 Score=81.04 Aligned_cols=135 Identities=17% Similarity=0.258 Sum_probs=70.0
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC--CCCEEEEEECCCCHHHHHHHHHHHHHHHHHH--------CCC
Q ss_conf 986546899889867999999999889929999778--7861464356827088999999999998410--------177
Q gi|254781055|r 1 MRYEYDLVVIGAGSSGVRSARLAAQLGKKVAICEEY--RVGGTCVIRGCIPKKLMFYASQYSEYFEDSQ--------GFG 70 (461)
Q Consensus 1 M~~~yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~--~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~--------~~g 70 (461)
T Consensus 3 ~~~~yDVIViG~GhAG~EAa~aaar~G~~t~lit~~~~~ig~----msCNPsiGGi~KG~lvrEidaLgG~mg~~aD~~~ 78 (621)
T PRK05192 3 YPEEYDVIVVGGGHAGCEAALAAARMGAKTLLLTHNLDTIGQ----MSCNPAIGGIAKGHLVREIDALGGEMGKAADKTG 78 (621)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEE----EECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 888798899897579999999999679967999658131158----6045203672165766687753689999998876
Q ss_pred EEC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEECCCCCC-C-CCCCCC--CCCCCCCCEEEEEEEEC
Q ss_conf 363------77544999999999999985546688643-0033200122332-2-222222--22232211001112322
Q gi|254781055|r 71 WSV------DHKSFDWQSLITAQNKELSRLESFYHNRL-ESAGVEIFASKGI-L-SSPHSV--YIANLNRTITSRYIVVS 139 (461)
Q Consensus 71 ~~~------~~~~~d~~~~~~~~~~~~~~l~~~~~~~l-~~~gv~vi~g~a~-~-~~~~~v--~V~~~~~~i~a~~iiIA 139 (461)
T Consensus 79 Iq~r~LN~sKGpAv-~-~~RaQ~Dr--~~Y~~~~~~~l~~~~nl~i~~~~v~~l~~~~~~v~GV~~~~g~~i~a~~vvlt 154 (621)
T PRK05192 79 IQFRMLNTSKGPAV-R-APRAQADR--KLYRAAMREILENQPNLTLFQGEVEDLIVENDRVKGVVTQDGLEFRAKAVVLT 154 (621)
T ss_pred HHHHHHCCCCCCCC-C-CHHHHHHH--HHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEEEECCCEEEEEEEEEEE
T ss_conf 16876158888300-6-73988859--99999999999649997899814579998799999999668709985269983
Q ss_pred CCCC
Q ss_conf 7764
Q gi|254781055|r 140 TGGS 143 (461)
Q Consensus 140 TGs~ 143 (461)
T Consensus 155 tGTF 158 (621)
T PRK05192 155 TGTF 158 (621)
T ss_pred CCCC
T ss_conf 1564