HHsearch alignment for GI: 254781055 and conserved domain: PRK05335
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed.
Probab=94.97 E-value=0.0077 Score=39.73 Aligned_cols=61 Identities=20% Similarity=0.238 Sum_probs=37.0
Q ss_pred CCCCCCCC-C---CCCCCCC----CCCCCCC-CEEEEEEECCCCCCCCCCCHHHCCCCCCHHHH----CCCCCCC
Q ss_conf 84112321-1---2354334----4574300-00355871254326431000000111101220----5887543
Q gi|254781055|r 271 GLEKVGVK-M---DENGFII----TDCYSRT-NVQSIFSLGDISGHIQLTPVAIHAAACFVETV----FKDNPTI 332 (461)
Q Consensus 271 ~L~~~gi~-~---~~~G~i~----vd~~~~T-s~~~IyA~GDv~g~~~l~~~A~~~g~~aa~~i----~~~~~~~ 332 (461)
T Consensus 299 GLEnaei~RyG~~~~ndyi~sP~~L~~tLe~K~~~~Lf~AGQInGt~GYeE-AAAqGliAGiNAa~~~~Gk~p~~ 372 (434)
T PRK05335 299 GLENAEFVRYGVMHRNTFINSPKLLDPTLQLKSRPNLFFAGQITGVEGYVE-SAASGLLAGINAARLALGKEPVV 372 (434)
T ss_pred CCCCCEEEECCEEEECCCCCCHHHCCCCEEECCCCCCEECCCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 734233543223330110478655484416348798277113367418899-99988999999999966999989