HHsearch alignment for GI: 254781055 and conserved domain: PRK05335

>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed.
Probab=94.97  E-value=0.0077  Score=39.73  Aligned_cols=61  Identities=20%  Similarity=0.238  Sum_probs=37.0

Q ss_pred             CCCCCCCC-C---CCCCCCC----CCCCCCC-CEEEEEEECCCCCCCCCCCHHHCCCCCCHHHH----CCCCCCC
Q ss_conf             84112321-1---2354334----4574300-00355871254326431000000111101220----5887543
Q gi|254781055|r  271 GLEKVGVK-M---DENGFII----TDCYSRT-NVQSIFSLGDISGHIQLTPVAIHAAACFVETV----FKDNPTI  332 (461)
Q Consensus       271 ~L~~~gi~-~---~~~G~i~----vd~~~~T-s~~~IyA~GDv~g~~~l~~~A~~~g~~aa~~i----~~~~~~~  332 (461)
T Consensus       299 GLEnaei~RyG~~~~ndyi~sP~~L~~tLe~K~~~~Lf~AGQInGt~GYeE-AAAqGliAGiNAa~~~~Gk~p~~  372 (434)
T PRK05335        299 GLENAEFVRYGVMHRNTFINSPKLLDPTLQLKSRPNLFFAGQITGVEGYVE-SAASGLLAGINAARLALGKEPVV  372 (434)
T ss_pred             CCCCCEEEECCEEEECCCCCCHHHCCCCEEECCCCCCEECCCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             734233543223330110478655484416348798277113367418899-99988999999999966999989