HHsearch alignment for GI: 254781055 and conserved domain: PRK12769
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=99.96 E-value=2.6e-29 Score=234.08 Aligned_cols=272 Identities=22% Similarity=0.332 Sum_probs=190.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHH
Q ss_conf 468998898679999999998899299997787-8614643568270889999999999984101773637754499999
Q gi|254781055|r 5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYR-VGGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQSL 83 (461)
Q Consensus 5 yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~-~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (461)
T Consensus 328 KkVAIIGsGPAGLsaA~~Lar~G~~VTVFE~~~~~GGl-L~yG-IP~------------------f-------RLp-k~v 379 (654)
T PRK12769 328 KRVAIIGAGPAGLACADVLTRNGVAVTVYDRHPEIGGL-LTFG-IPA------------------F-------KLD-KSL 379 (654)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCE-EEEC-CCC------------------C-------CCC-HHH
T ss_conf 98999897789999999999769757995257778866-7524-862------------------2-------277-899
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC-EEEEEECCCCC--CCCCCC
Q ss_conf 999999998554668864300332001223322222222222322110011123227764-02332037622--112378
Q gi|254781055|r 84 ITAQNKELSRLESFYHNRLESAGVEIFASKGILSSPHSVYIANLNRTITSRYIVVSTGGS-PNRMDFKGSDL--CITSDE 160 (461)
Q Consensus 84 ~~~~~~~~~~l~~~~~~~l~~~gv~vi~g~a~~~~~~~v~V~~~~~~i~a~~iiIATGs~-p~~p~i~g~~~--~~ts~~ 160 (461)
T Consensus 380 v~~e---i--------~~l~~lGV~f~~n~~--VG-kDitl~eL~~--~yDAVfla~Ga~~~r~l~IpGedl~GV~~Ale 443 (654)
T PRK12769 380 LARR---R--------EIFSAMGIHFELNCE--VG-KDISLESLLE--DYDAVFVGVGTYRSMKAGLPNEDAPGVYDALP 443 (654)
T ss_pred HHHH---H--------HHHHHCCCEEECCCE--EC-CCCCHHHHHH--CCCEEEEECCCCCCCCCCCCCCCCCCCEEHHH
T ss_conf 9999---9--------999826988983717--68-7658999973--69989995178878669989977888387888
Q ss_pred CC--------CCC---C------CCCCCCCCCCCCCCCHHHHHHHCCCC-CCCEECCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 51--------123---3------33443212345453011244210122-10000011112-222223212222222222
Q gi|254781055|r 161 IF--------SLK---S------LPQSTLIIGGGYIAVEFAGILNSLGS-KTTLVTRGNSI-LSKFDSDIRQGLTDVMIS 221 (461)
Q Consensus 161 ~~--------~l~---~------~P~~i~IiGgG~ig~E~A~~~~~lG~-~Vtli~~~~~~-l~~~d~~~~~~~~~~l~~ 221 (461)
T Consensus 444 FL~~~~~~~~g~~~~~~~~~i~~~GK~VvVIGGGntAmDcaRtA~RlGA~~Vt~vYRR~~~eMPA~~~Ev~-----~A~E 518 (654)
T PRK12769 444 FLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVK-----NARE 518 (654)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHH-----HHHH
T ss_conf 89998886517755566676555575589988872469999999975998366045467234998756655-----7885
Q ss_pred CCCCCCCCCEEEECC-CCCCCCEE------EE----ECC-----------CCCCCCCCEECCCCEEEECCCCCCCCCCCC
Q ss_conf 233233220001102-44576102------43----127-----------532222100001522200126841123211
Q gi|254781055|r 222 RGMQVFHNDTIESVV-SESGQLKS------IL----KSG-----------KIVKTDQVILAVGRTPRTTGIGLEKVGVKM 279 (461)
Q Consensus 222 ~Gv~i~~~~~v~~i~-~~~~~~~~------~~----~~g-----------~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~ 279 (461)
T Consensus 519 EGV~f~~~~~P~ei~~de~G~V~gv~~~r~~lgepD~sGRr~p~~v~gse~~i~aD~VI~AiG~~p~~~~~-~~~~gl~~ 597 (654)
T PRK12769 519 EGANFEFNVQPVALVLDEQGHVCGIRFLRTRLGEPDAQGRRRPVPIEGSEFVMPADAVIMAFGFNPHGMPW-LESHGVTV 597 (654)
T ss_pred CCCEEEECCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEECCEEEECCCCCCCCCCC-CCCCCEEE
T ss_conf 68789944685799977997299999999885562777876205648966999899999998899988753-22568137
Q ss_pred CCCCCCCCCCC----CCCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHC
Q ss_conf 23543344574----300003558712543264310000001111012205
Q gi|254781055|r 280 DENGFIITDCY----SRTNVQSIFSLGDISGHIQLTPVAIHAAACFVETVF 326 (461)
Q Consensus 280 ~~~G~i~vd~~----~~Ts~~~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~ 326 (461)
T Consensus 598 ~~~G~I~~d~~~~~~~~Ts~pgVFAgGD~v~G~stVV~Ai~~Gr~AA~aId 648 (654)
T PRK12769 598 DKWGRIIADVESQYRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGII 648 (654)
T ss_pred CCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 699988736777765448999989807856682899999999999999999