HHsearch alignment for GI: 254781055 and conserved domain: PRK12770

>PRK12770 putative glutamate synthase subunit beta; Provisional.
Probab=97.58  E-value=4.7e-05  Score=55.99  Aligned_cols=100  Identities=17%  Similarity=0.177  Sum_probs=61.7

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCC----CC-----CCCCCCCCCCCCCCCCCCCCCCCEEEECCC-
Q ss_conf             34432123454530112442101221000001111222----22-----232122222222222332332200011024-
Q gi|254781055|r  168 PQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSILS----KF-----DSDIRQGLTDVMISRGMQVFHNDTIESVVS-  237 (461)
Q Consensus       168 P~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l~----~~-----d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~-  237 (461)
T Consensus        17 gkkV~IIGaGPaGlsAA~~aa~~G~~v~viEk~~~~GG~~~~gip~~~~p~~~~~~~~~~l~~~g~~~~~~~~v~~~~~~   96 (350)
T PRK12770         17 GKKVAIIGAGPAGLAAAGYLACLGHEVHVYDKLPEPGGLMVFGIPEFRIPIERVREGVRELEELGVVFHTRTKVYCDEPP   96 (350)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCEEEEEECCE
T ss_conf             79899999558899999999978998599953696982899834797666889999999999709769732099850201


Q ss_pred             ---CCCCCEEEEECCC--CCCCCCCEECCCC-EEEE
Q ss_conf             ---4576102431275--3222210000152-2200
Q gi|254781055|r  238 ---ESGQLKSILKSGK--IVKTDQVILAVGR-TPRT  267 (461)
Q Consensus       238 ---~~~~~~~~~~~g~--~~~~D~vl~a~Gr-~Pn~  267 (461)
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~daviiAtG~~~~r~  132 (350)
T PRK12770         97 HEEEGDEFVEDFVSLEELVEEYDAVLIATGTWKSRK  132 (350)
T ss_pred             EEEECCEEEEEEEEHHHHHHHCCEEEEECCCCCCCC
T ss_conf             133032035776018987741899999658997735