HHsearch alignment for GI: 254781055 and conserved domain: PRK12809

Probab=97.92  E-value=1.2e-06  Score=67.64  Aligned_cols=89  Identities=20%  Similarity=0.272  Sum_probs=66.2

Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf             443212345453011244210122100000111122-------2--2223212222222222233233220001102445
Q gi|254781055|r  169 QSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGNSIL-------S--KFDSDIRQGLTDVMISRGMQVFHNDTIESVVSES  239 (461)
Q Consensus       169 ~~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~~~~l-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~  239 (461)
T Consensus       311 kKVAVIGsGPAGLaaA~~Lar~G~~VTVfE~~~~~GGlL~yGIP~fRLPK~vv~rei~~l~~lGV~f~~n~~VGkD----  386 (639)
T PRK12809        311 EKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD----  386 (639)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCEECCC----
T ss_conf             9899989758999999999975990699936888898685358745277789999999998649889919677986----


Q ss_pred             CCCEEEEECCCCCCCCCCEECCCC-EEE
Q ss_conf             761024312753222210000152-220
Q gi|254781055|r  240 GQLKSILKSGKIVKTDQVILAVGR-TPR  266 (461)
Q Consensus       240 ~~~~~~~~~g~~~~~D~vl~a~Gr-~Pn  266 (461)
T Consensus       387 ----it~~eL~-~~yDAVflg~Ga~~~~  409 (639)
T PRK12809        387 ----ITFSDLT-SEYDAVFIGVGTYGMM  409 (639)
T ss_pred             ----CCHHHHH-HHCCEEEEEECCCCCC
T ss_conf             ----8899997-3179899973678885