HHsearch alignment for GI: 254781055 and conserved domain: TIGR01292

>TIGR01292 TRX_reduct thioredoxin-disulfide reductase; InterPro: IPR005982 Reactive oxygen species (ROS) are known mediators of intracellular signaling cascades. Excessive production of ROS may, however, lead to oxidative stress, loss of cell function, and ultimately apoptosis or necrosis. A balance between oxidant and antioxidant intracellular systems is hence vital for cell function, regulation, and adaptation to diverse growth conditions. Thioredoxin reductase in conjunction with thioredoxin is a ubiquitous oxidoreductase system with antioxidant and redox regulatory roles. Thioredoxin reductase (1.8.1.9 from EC) reduces oxidised thioredoxin in the presence of NADPH. Reduced thioredoxin serves as an electron donor for thioredoxin peroxidase which consequently reduces H_2O_2 to H_2O. In mammals, extracellular forms of Trx also have cytokine-like effects. Mammalian TrxR has a highly reactive active site selenocysteine residue resulting in a profound reductive capacity, reducing several substrates in addition to Trx .; GO: 0004791 thioredoxin-disulfide reductase activity, 0019430 removal of superoxide radicals, 0005737 cytoplasm.
Probab=96.69  E-value=0.00065  Score=47.62  Aligned_cols=127  Identities=19%  Similarity=0.252  Sum_probs=80.6

Q ss_pred             CCCCCCCCCCCCHHHHHHHCCCCCCCEECCC------CCCC--------CCCC-----CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             4321234545301124421012210000011------1122--------2222-----3212222222222233233220
Q gi|254781055|r  170 STLIIGGGYIAVEFAGILNSLGSKTTLVTRG------NSIL--------SKFD-----SDIRQGLTDVMISRGMQVFHND  230 (461)
Q Consensus       170 ~i~IiGgG~ig~E~A~~~~~lG~~Vtli~~~------~~~l--------~~~d-----~~~~~~~~~~l~~~Gv~i~~~~  230 (461)
T Consensus         2 DviIIGaGPAGlTAAIYa~Ra~l~~l~~eg~~~G~aGGql~~T~~vENYPGf~e~i~G~~L~~~M~~Qa~~fG~~~~~G~   81 (321)
T TIGR01292         2 DVIIIGAGPAGLTAAIYAARANLKTLLIEGMEPGIAGGQLTTTTEVENYPGFPEGISGPELMEKMKEQAKKFGAEIIYGE   81 (321)
T ss_pred             CEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECC
T ss_conf             28998478678889999887467278983577774555333220651368688876628899999999987067366267


Q ss_pred             EEEECCCCCC-----CCEEEEECCCCCCCCCCEECCCCEEEECCCCCCCCC-CCCCCCCC---CCCCC--C-CCCCEEEE
Q ss_conf             0011024457-----610243127532222100001522200126841123-21123543---34457--4-30000355
Q gi|254781055|r  231 TIESVVSESG-----QLKSILKSGKIVKTDQVILAVGRTPRTTGIGLEKVG-VKMDENGF---IITDC--Y-SRTNVQSI  298 (461)
Q Consensus       231 ~v~~i~~~~~-----~~~~~~~~g~~~~~D~vl~a~Gr~Pn~~~l~L~~~g-i~~~~~G~---i~vd~--~-~~Ts~~~I  298 (461)
T Consensus        82 ~v~~v~~~~~~yE~~~F~~~~~--~~y~a~avIiAtGa~~r--~lg~~k-GE~ef~GrGVSyCA~CDGA~~ffk--~K~V  154 (321)
T TIGR01292        82 EVIRVDKSDRAYESDPFKVKTG--KEYTAKAVIIATGAEAR--KLGIPK-GEDEFLGRGVSYCATCDGASPFFK--NKEV  154 (321)
T ss_pred             EEEEEECCCCCCCCCEEEEEEC--CEEEEEEEEEECCCHHH--HCCCCC-CHHHHCCCCEEEEEHHCCCCHHHC--CCEE
T ss_conf             0568633788436610389717--56886589991387154--237886-645532686667223105401205--9889


Q ss_pred             EEECC
Q ss_conf             87125
Q gi|254781055|r  299 FSLGD  303 (461)
Q Consensus       299 yA~GD  303 (461)
T Consensus       155 ~VvGG  159 (321)
T TIGR01292       155 AVVGG  159 (321)
T ss_pred             EEECC
T ss_conf             99879