>TIGR01373 soxB sarcosine oxidase, beta subunit family; InterPro: IPR006278 These sequences represent the beta subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members share the same function. The model is designated as subfamily rather than equivalog for this reason. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate . Bacterial sarcosine oxidases have been isolated from over a dozen different organisms and fall into two major classes (1) monomeric form that contains only covalent flavin and (2) heterotetrameric (alpha, beta, gamma, delta) forms that contain a covalent and noncovalent flavin, this entry represents the heterotetrameric form.; GO: 0008115 sarcosine oxidase activity, 0046653 tetrahydrofolate metabolic process.

Probab=97.70  E-value=5.5e-05  Score=55.49  Aligned_cols=49  Identities=29%  Similarity=0.479  Sum_probs=38.1

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHH-CCC-CEEEEECCCCCEE--EEEECCCCH
Q ss_conf             865468998898679999999998-899-2999977878614--643568270
Q gi|254781055|r    2 RYEYDLVVIGAGSSGVRSARLAAQ-LGK-KVAICEEYRVGGT--CVIRGCIPK   50 (461)
Q Consensus         2 ~~~yDvvIIG~GpaG~~aA~~la~-~g~-kV~liE~~~~GGt--C~~~GCiPs   50 (461)
T Consensus        28 K~~YDviIvGgGGHGLATAYYLA~~hGItnVAVlEKgwlGgGN~gRNTTivRS   80 (407)
T TIGR01373        28 KPEYDVIIVGGGGHGLATAYYLAKEHGITNVAVLEKGWLGGGNTGRNTTIVRS   80 (407)
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEE
T ss_conf             88546788868860689999988646940689985062168866434214654