HHsearch alignment for GI: 254781055 and conserved domain: TIGR02023
>TIGR02023 BchP-ChlP geranylgeranyl reductase; InterPro: IPR010253 This entry represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll . It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).; GO: 0045550 geranylgeranyl reductase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process.
Probab=90.74 E-value=0.096 Score=31.68 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=40.5
Q ss_pred CCCCCEECCCCEEEEC------------CCC--CCCCCCCCCCCCCCCCCCCC-CCCEEEEEEECCCCCCCCCC-----C
Q ss_conf 2221000015222001------------268--41123211235433445743-00003558712543264310-----0
Q gi|254781055|r 253 KTDQVILAVGRTPRTT------------GIG--LEKVGVKMDENGFIITDCYS-RTNVQSIFSLGDISGHIQLT-----P 312 (461)
Q Consensus 253 ~~D~vl~a~Gr~Pn~~------------~l~--L~~~gi~~~~~G~i~vd~~~-~Ts~~~IyA~GDv~g~~~l~-----~ 312 (461)
T Consensus 222 k~dH~avG~Gt~P~h~~d~K~~~~~lr~~~GD~L~~~~tir~EaapIPm~Pr~~~~~~r~~~L~GDAAG~V~~~SGEGIY 301 (408)
T TIGR02023 222 KGDHIAVGTGTEPTHGFDIKQLQAALRRRAGDKLDGGKTIRREAAPIPMKPRPRWDSGRDVVLVGDAAGLVTPASGEGIY 301 (408)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCHHH
T ss_conf 87778883278856427899999999987302656183010026767755441000588669981346633443761688
Q ss_pred HHHCCCCCCHHHHCC
Q ss_conf 000011110122058
Q gi|254781055|r 313 VAIHAAACFVETVFK 327 (461)
Q Consensus 313 ~A~~~g~~aa~~i~~ 327 (461)
T Consensus 302 ~Am~sG~~aA~a~~E 316 (408)
T TIGR02023 302 FAMKSGKMAAEAIVE 316 (408)
T ss_pred HHHHCCHHHHHHHHH
T ss_conf 876310789999999