HHsearch alignment for GI: 254781055 and conserved domain: TIGR02733
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD; InterPro: IPR014104 Members of this family are encoded by slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. (strain PCC 6803), and close homologues (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyses the first step that is committed to myxoxanthophyll..
Probab=97.97 E-value=8.9e-06 Score=61.30 Aligned_cols=281 Identities=20% Similarity=0.347 Sum_probs=145.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC-CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHH
Q ss_conf 4689988986799999999988992999977878-614643568270889999999999984101773637754499999
Q gi|254781055|r 5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYRV-GGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQSL 83 (461)
Q Consensus 5 yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~~-GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (461)
T Consensus 2 ~~VvVIGaGIaGLTaAALLA~~G~~Vtl~E~h~q~GG------CAg------------TFr---Rr~ftF-----DVGA- 54 (499)
T TIGR02733 2 TSVVVIGAGIAGLTAAALLAKRGYRVTLLEQHAQLGG------CAG------------TFR---RRGFTF-----DVGA- 54 (499)
T ss_pred CEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCC------CCC------------CCC---CCCEEE-----ECCC-
T ss_conf 7069981872678999999853996799974012787------544------------343---687454-----0455-
Q ss_pred HHHHHHHHHHHH-HHHH-HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCE-------------EEEE
Q ss_conf 999999998554-6688-643003320012233222222222223221100111232277640-------------2332
Q gi|254781055|r 84 ITAQNKELSRLE-SFYH-NRLESAGVEIFASKGILSSPHSVYIANLNRTITSRYIVVSTGGSP-------------NRMD 148 (461)
Q Consensus 84 ~~~~~~~~~~l~-~~~~-~~l~~~gv~vi~g~a~~~~~~~v~V~~~~~~i~a~~iiIATGs~p-------------~~p~ 148 (461)
T Consensus 55 -----TQVAGLEpGGiH~riF~~L~~pLP--~A~~lDPAC~-V~------------L~dg~~PI~lWhDp~rW~~ER~~q 114 (499)
T TIGR02733 55 -----TQVAGLEPGGIHARIFRELGLPLP--EAKILDPACA-VY------------LPDGSEPINLWHDPERWQKERERQ 114 (499)
T ss_pred -----EEECCCCCCCHHHHHHHHCCCCCC--CCCCCCCCCE-EE------------CCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf -----221367898579999985488789--8840688336-77------------787951100235807889998640
Q ss_pred ECCCCCCCC--------------------CCCCCCCCCC-----CCCCCCCCCCCCCCHHHHHHHCCCC--C--------
Q ss_conf 037622112--------------------3785112333-----3443212345453011244210122--1--------
Q gi|254781055|r 149 FKGSDLCIT--------------------SDEIFSLKSL-----PQSTLIIGGGYIAVEFAGILNSLGS--K-------- 193 (461)
Q Consensus 149 i~g~~~~~t--------------------s~~~~~l~~~-----P~~i~IiGgG~ig~E~A~~~~~lG~--~-------- 193 (461)
T Consensus 115 FPGSe~FW~l~~~lf~~nW~F~~RdPvLPprn~WDL~QL~~AlRP~tLl--T~~~~~~Tv~DlL~l~gl~~D~RLr~FLD 192 (499)
T TIGR02733 115 FPGSERFWSLCEQLFQSNWRFAQRDPVLPPRNLWDLLQLVSALRPDTLL--TGPLSLLTVADLLRLCGLGDDRRLRRFLD 192 (499)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 8885778999999986053011678635677778999999874630455--68777533999999833688835888755
Q ss_pred -------------------CCEECCCCCCCCCC--C---CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE--EE
Q ss_conf -------------------00000111122222--2---3212222222222233233220001102445761024--31
Q gi|254781055|r 194 -------------------TTLVTRGNSILSKF--D---SDIRQGLTDVMISRGMQVFHNDTIESVVSESGQLKSI--LK 247 (461)
Q Consensus 194 -------------------Vtli~~~~~~l~~~--d---~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~--~~ 247 (461)
T Consensus 193 LQLKLYSQ~~Ad~TAaLYgATvL~~~Q~P~GLwHL~GSMQ~LSD~L~~al~~~GG~l~~gqrV~~I~~~~~~~~~~~v~~ 272 (499)
T TIGR02733 193 LQLKLYSQEDADETAALYGATVLQMAQAPRGLWHLHGSMQVLSDRLVEALKRDGGRLLTGQRVTAIETKGGRAGWVVVVD 272 (499)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEEEEE
T ss_conf 54223322203678999999999984378755001320235789999999867987986002323443168415688741
Q ss_pred C--C--CCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC--CCEEE------EEEEC-------CCCCCC
Q ss_conf 2--7--5322221000015222001268411232112354334457430--00035------58712-------543264
Q gi|254781055|r 248 S--G--KIVKTDQVILAVGRTPRTTGIGLEKVGVKMDENGFIITDCYSR--TNVQS------IFSLG-------DISGHI 308 (461)
Q Consensus 248 ~--g--~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~~G~i~vd~~~~--Ts~~~------IyA~G-------Dv~g~~ 308 (461)
T Consensus 273 ~r~~~~~~~~A~d~V~~lPp----q~L-L~l~~~~~~----~-~~~Yr~Rl~~LP~pSGA~V~Y~gvk~~alP~~cp~Hl 342 (499)
T TIGR02733 273 SRKQEDEQVKADDVVANLPP----QSL-LELLGSELA----L-PPGYRKRLKKLPEPSGAFVLYLGVKRAALPVDCPPHL 342 (499)
T ss_pred CCCHHHHHHHHHCCEEECCH----HHH-HHHCCCCCC----C-CHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCC
T ss_conf 64114677442031200774----116-876687666----6-6147999972778897288600013333777787860
Q ss_pred CCCCHHHCCCCCCHHHHCC-------CCCCCCCCCCCCCCEEEHH
Q ss_conf 3100000011110122058-------8754332333333123068
Q gi|254781055|r 309 QLTPVAIHAAACFVETVFK-------DNPTIPDYDLVPTAVFSKP 346 (461)
Q Consensus 309 ~l~~~A~~~g~~aa~~i~~-------~~~~~~~~~~ip~~ift~p 346 (461)
T Consensus 343 Qf~~--D~~GP~gENNSLFVSiS~egDGRAP~G~~TlIAS~FTd~ 385 (499)
T TIGR02733 343 QFLS--DHQGPIGENNSLFVSISQEGDGRAPAGEATLIASSFTDV 385 (499)
T ss_pred EEEC--CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCC
T ss_conf 4500--788882003640278657868887757536787421371