HHsearch alignment for GI: 254781055 and conserved domain: TIGR02733

>TIGR02733 desat_CrtD C-3',4' desaturase CrtD; InterPro: IPR014104 Members of this family are encoded by slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. (strain PCC 6803), and close homologues (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyses the first step that is committed to myxoxanthophyll..
Probab=97.97  E-value=8.9e-06  Score=61.30  Aligned_cols=281  Identities=20%  Similarity=0.347  Sum_probs=145.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC-CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHH
Q ss_conf             4689988986799999999988992999977878-614643568270889999999999984101773637754499999
Q gi|254781055|r    5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYRV-GGTCVIRGCIPKKLMFYASQYSEYFEDSQGFGWSVDHKSFDWQSL   83 (461)
Q Consensus         5 yDvvIIG~GpaG~~aA~~la~~g~kV~liE~~~~-GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~d~~~~   83 (461)
T Consensus         2 ~~VvVIGaGIaGLTaAALLA~~G~~Vtl~E~h~q~GG------CAg------------TFr---Rr~ftF-----DVGA-   54 (499)
T TIGR02733         2 TSVVVIGAGIAGLTAAALLAKRGYRVTLLEQHAQLGG------CAG------------TFR---RRGFTF-----DVGA-   54 (499)
T ss_pred             CEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCC------CCC------------CCC---CCCEEE-----ECCC-
T ss_conf             7069981872678999999853996799974012787------544------------343---687454-----0455-


Q ss_pred             HHHHHHHHHHHH-HHHH-HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCE-------------EEEE
Q ss_conf             999999998554-6688-643003320012233222222222223221100111232277640-------------2332
Q gi|254781055|r   84 ITAQNKELSRLE-SFYH-NRLESAGVEIFASKGILSSPHSVYIANLNRTITSRYIVVSTGGSP-------------NRMD  148 (461)
Q Consensus        84 ~~~~~~~~~~l~-~~~~-~~l~~~gv~vi~g~a~~~~~~~v~V~~~~~~i~a~~iiIATGs~p-------------~~p~  148 (461)
T Consensus        55 -----TQVAGLEpGGiH~riF~~L~~pLP--~A~~lDPAC~-V~------------L~dg~~PI~lWhDp~rW~~ER~~q  114 (499)
T TIGR02733        55 -----TQVAGLEPGGIHARIFRELGLPLP--EAKILDPACA-VY------------LPDGSEPINLWHDPERWQKERERQ  114 (499)
T ss_pred             -----EEECCCCCCCHHHHHHHHCCCCCC--CCCCCCCCCE-EE------------CCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             -----221367898579999985488789--8840688336-77------------787951100235807889998640


Q ss_pred             ECCCCCCCC--------------------CCCCCCCCCC-----CCCCCCCCCCCCCCHHHHHHHCCCC--C--------
Q ss_conf             037622112--------------------3785112333-----3443212345453011244210122--1--------
Q gi|254781055|r  149 FKGSDLCIT--------------------SDEIFSLKSL-----PQSTLIIGGGYIAVEFAGILNSLGS--K--------  193 (461)
Q Consensus       149 i~g~~~~~t--------------------s~~~~~l~~~-----P~~i~IiGgG~ig~E~A~~~~~lG~--~--------  193 (461)
T Consensus       115 FPGSe~FW~l~~~lf~~nW~F~~RdPvLPprn~WDL~QL~~AlRP~tLl--T~~~~~~Tv~DlL~l~gl~~D~RLr~FLD  192 (499)
T TIGR02733       115 FPGSERFWSLCEQLFQSNWRFAQRDPVLPPRNLWDLLQLVSALRPDTLL--TGPLSLLTVADLLRLCGLGDDRRLRRFLD  192 (499)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             8885778999999986053011678635677778999999874630455--68777533999999833688835888755


Q ss_pred             -------------------CCEECCCCCCCCCC--C---CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE--EE
Q ss_conf             -------------------00000111122222--2---3212222222222233233220001102445761024--31
Q gi|254781055|r  194 -------------------TTLVTRGNSILSKF--D---SDIRQGLTDVMISRGMQVFHNDTIESVVSESGQLKSI--LK  247 (461)
Q Consensus       194 -------------------Vtli~~~~~~l~~~--d---~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~--~~  247 (461)
T Consensus       193 LQLKLYSQ~~Ad~TAaLYgATvL~~~Q~P~GLwHL~GSMQ~LSD~L~~al~~~GG~l~~gqrV~~I~~~~~~~~~~~v~~  272 (499)
T TIGR02733       193 LQLKLYSQEDADETAALYGATVLQMAQAPRGLWHLHGSMQVLSDRLVEALKRDGGRLLTGQRVTAIETKGGRAGWVVVVD  272 (499)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEEEEE
T ss_conf             54223322203678999999999984378755001320235789999999867987986002323443168415688741


Q ss_pred             C--C--CCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC--CCEEE------EEEEC-------CCCCCC
Q ss_conf             2--7--5322221000015222001268411232112354334457430--00035------58712-------543264
Q gi|254781055|r  248 S--G--KIVKTDQVILAVGRTPRTTGIGLEKVGVKMDENGFIITDCYSR--TNVQS------IFSLG-------DISGHI  308 (461)
Q Consensus       248 ~--g--~~~~~D~vl~a~Gr~Pn~~~l~L~~~gi~~~~~G~i~vd~~~~--Ts~~~------IyA~G-------Dv~g~~  308 (461)
T Consensus       273 ~r~~~~~~~~A~d~V~~lPp----q~L-L~l~~~~~~----~-~~~Yr~Rl~~LP~pSGA~V~Y~gvk~~alP~~cp~Hl  342 (499)
T TIGR02733       273 SRKQEDEQVKADDVVANLPP----QSL-LELLGSELA----L-PPGYRKRLKKLPEPSGAFVLYLGVKRAALPVDCPPHL  342 (499)
T ss_pred             CCCHHHHHHHHHCCEEECCH----HHH-HHHCCCCCC----C-CHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCC
T ss_conf             64114677442031200774----116-876687666----6-6147999972778897288600013333777787860


Q ss_pred             CCCCHHHCCCCCCHHHHCC-------CCCCCCCCCCCCCCEEEHH
Q ss_conf             3100000011110122058-------8754332333333123068
Q gi|254781055|r  309 QLTPVAIHAAACFVETVFK-------DNPTIPDYDLVPTAVFSKP  346 (461)
Q Consensus       309 ~l~~~A~~~g~~aa~~i~~-------~~~~~~~~~~ip~~ift~p  346 (461)
T Consensus       343 Qf~~--D~~GP~gENNSLFVSiS~egDGRAP~G~~TlIAS~FTd~  385 (499)
T TIGR02733       343 QFLS--DHQGPIGENNSLFVSISQEGDGRAPAGEATLIASSFTDV  385 (499)
T ss_pred             EEEC--CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCC
T ss_conf             4500--788882003640278657868887757536787421371