HHsearch alignment for GI: 254781055 and conserved domain: pfam02852

>pfam02852 Pyr_redox_dim Pyridine nucleotide-disulphide oxidoreductase, dimerization domain. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases.
Probab=99.93  E-value=8e-26  Score=208.48  Aligned_cols=109  Identities=39%  Similarity=0.551  Sum_probs=106.5

Q ss_pred             CCCCEEEHHHHHHHCCCHHHHHHCCCCEEEEEEEECCCHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH
Q ss_conf             33312306887551689889985499479999830313668747998407999997899869999998199889999999
Q gi|254781055|r  338 VPTAVFSKPEIASVGLTEEEAVQKFCRLEIYKTKFFPMKCFLSKRFEHTIMKIIVHADNHKVLGVHILGHEASEIIQVLG  417 (461)
Q Consensus       338 ip~~ift~peiA~VG~te~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~kli~~~~~~~iLG~~~vg~~A~elI~~~~  417 (461)
T Consensus         1 iP~~vft~PeiA~VGlte~~a~~~g~~~~v~~~~~~~~~ra~~~~~~~g~~Kli~d~~~~~ilGa~ivg~~A~elI~~~~   80 (110)
T pfam02852         1 VPSVVFTDPEIASVGLTEEEAKKKGGEVKVGKFPFKANGRALAYGETKGFVKLVADAETGRILGAHIVGPNAGELIQEAA   80 (110)
T ss_pred             CCEEEECCCCEEEEECCHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCHHHHHHHHH
T ss_conf             99488276802688688999997289861788667751888866898610799984478966899999098878999999


Q ss_pred             HHHHCCCCHHHHHCCCCCCCCHHHHHHHH
Q ss_conf             99986798789963785477477899875
Q gi|254781055|r  418 VCLKAGCVKKDFDRCMAVHPTSSEELVTM  446 (461)
Q Consensus       418 ~ai~~~~t~~~l~~~~~~hPT~sE~l~~~  446 (461)
T Consensus        81 ~ai~~~~t~~~l~~~i~~hPT~sE~~~~a  109 (110)
T pfam02852        81 LAIKMGATVEDLANTIHAHPTLSEALVEA  109 (110)
T ss_pred             HHHHCCCCHHHHHHCCCCCCCHHHHHHHH
T ss_conf             99986998999952766798778999975