RPSBLAST alignment for GI: 254781055 and conserved domain: TIGR03143
>gnl|CDD|132187 TIGR03143, AhpF_homolog, putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140). Length = 555
Score = 55.6 bits (134), Expect = 3e-08
Identities = 74/335 (22%), Positives = 125/335 (37%), Gaps = 92/335 (27%)
Query: 5 YDLVVIGAGSSGVRSARLAAQLGKKVAICEEYRVGGTCV----------IRGCIPKKLMF 54
YDL++IG G +G+ + A + I E+ GG I +LM
Sbjct: 5 YDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKDDFGGQITITSEVVNYPGILNTTGPELM- 63
Query: 55 YASQYSEYFEDSQGFGWSVDHKSFDWQSLITAQNKELSRLESFYHNRLESAGVEIFASKG 114
E + +Q FG + E+ ++ + I ++G
Sbjct: 64 -----QEMRQQAQDFG-------------VKFLQAEVLDVD------FDGDIKTIKTARG 99
Query: 115 ILSSPHSVYIANLNRTITSRYIVVSTGGSPNRMDFKGSD--------LCITSD-EIFSLK 165
+ +V IA TG SP ++ F G + C T D E F+
Sbjct: 100 DYKT-LAVLIA--------------TGASPRKLGFPGEEEFTGRGVAYCATCDGEFFTGM 144
Query: 166 SLPQSTLIIGGGYIAVEFAGILNSLGSKTTLVTRGN----------------SILSKFDS 209
+ +IGGG+ A E A L SK T++ R I KF++
Sbjct: 145 DV----FVIGGGFAAAEEAVFLTRYASKVTVIVREPDFTCAKLIAEKVKNHPKIEVKFNT 200
Query: 210 DIRQGLTDVMISRGMQVFHNDTIESVVSESGQLKSILKSGKIVKTDQVILAVGRTPRTTG 269
++++ D + F N+ +G+ + K+ K T V + VG P +
Sbjct: 201 ELKEATGDDGLRYA--KFVNN-------VTGE-ITEYKAPKDAGTFGVFVFVGYAPSSE- 249
Query: 270 IGLEKVGVKMDENGFIITDCYSRTNVQSIFSLGDI 304
L K V++D+ G+I T+ TNV +++ GD+
Sbjct: 250 --LFKGVVELDKRGYIPTNEDMETNVPGVYAAGDL 282