HHsearch alignment for GI: 254781059 and conserved domain: pfam01458

Probab=98.70  E-value=4.7e-05  Score=56.77  Aligned_cols=177  Identities=11%  Similarity=0.073  Sum_probs=120.5

Q ss_pred             CEEEEECCCCCCCCCEEEEEEECCCCCEE-CCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEE
Q ss_conf             43887347741342127999965888400-22148997277249999615676544444433058998669958999996
Q gi|254781059|r  199 GSFVYIPKGVRCPMELSTYFRINEKGTGQ-FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV  277 (489)
Q Consensus       199 G~fi~Vp~gv~v~~PI~~~~~~~~~~~~~-f~r~lIi~ee~S~v~~iE~~~s~~~~~~~~~~~v~Ei~vg~nA~v~~~~i  277 (489)
T Consensus         9 r~~I~v~~~s~~~i--ie~~~~~~~~~~~~n~v~ei~l~~nA~l~~~~iq~~---~~~~~~~~~~~~~~~~~s~~~~~~~   83 (230)
T pfam01458         9 RNLIIVEEGAEVTI--IEGCASPGAGDGLHNGVTEIIVGEGARLKYTKIQNE---GKGSIHFATTRVRLEEDATLESTSV   83 (230)
T ss_pred             CEEEEECCCCEEEE--EEEECCCCCCCEEEEEEEEEEECCCCEEEEEEEECC---CCCEEEEEEEEEEECCCCEEEEEEE
T ss_conf             38999899999999--999617998763888999999889989999999728---9972999568999999989999999


Q ss_pred             EECCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEECCCEEE--EEEEEEEECCCCEEEEEEEEEECCC--EEEEEEE
Q ss_conf             30475531144874640146786304630389988751463478--8538998278727999987762598--6899721
Q gi|254781059|r  278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW--KYPSCLLRGEQSCGEFYSIAISNGF--QQIDSGT  353 (489)
Q Consensus       278 Qn~~~~~~~~~~~~~~~~t~r~~~~~~~a~~~~~~~~lG~~~~r--~~~~~~L~G~~a~~~~~gi~l~~~~--Q~~D~~~  353 (489)
T Consensus        84 ~~-G~------~--~~r~~~~~~l~G~~a~~~~~~~~l~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i  154 (230)
T pfam01458        84 SL-GG------K--LSRNDPDVDLNGEGAEAELNGVYLAKGDQHVDTHTKVRHNGPNTRSRILYKGVLKDRSRGVFRGKI  154 (230)
T ss_pred             EE-CC------C--EEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEE
T ss_conf             97-88------1--299931799967998999999996369799950269999889809961051365687269996214


Q ss_pred             EEEEECCCCCCEEEEEEEEC-CCCEEEEEEEEEECCC
Q ss_conf             89983676611010000105-8946899401473388
Q gi|254781059|r  354 KMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRG  389 (489)
Q Consensus       354 ~v~H~~p~t~S~~~~K~i~~-d~s~~~f~G~i~v~~~  389 (489)
T Consensus       155 ~V~~~A~~t~~~q~~~~llLs~~a~~~s~P~Lei~~d  191 (230)
T pfam01458       155 KVEKGAQKTDGHQECRNLLLSDKARVDTKPELEIYAD  191 (230)
T ss_pred             EECCCCCEECCEEEEEEEEECCCCEEEECCEEEEECC
T ss_conf             6727774300056787797058830885854999759