HHsearch alignment of GI: 254781059 and MMDB domain: 1vh4_A_
>1vh4_A (A:) SUFD protein; structural genomics, protein binding protein; 1.75A {Escherichia coli}
Probab=100.00 E-value=0 Score=667.03 Aligned_cols=415 Identities=16% Similarity=0.139 Sum_probs=351.6
Q ss_pred ECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 20488889999999986329988999999999999996887786658766568200031005653334332101587888
Q gi|254781059|r 30 DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109 (489)
Q Consensus 30 ~~~~~gl~~~~i~~iS~~k~EP~Wl~e~R~~Al~~f~~l~~P~W~~~~l~~i~~~~i~~~~~p~~~~~~~sld~v~~ei~ 109 (489)
.++.++|++.+++.||+.++||+||+++|++||+.|+++|+|+|+.+.|+.+++. .+..+ ++...++...
T Consensus 3 ~~~~~~l~~~~~~~~s~~~~ep~wl~~~R~~a~~~~~~l~~P~~~~e~wryt~~~---~~~~~-------~~~~~~~~~~ 72 (435)
T 1vh4_A 3 MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLE---GLINS-------QFVSIAGEIS 72 (435)
T ss_dssp --------CHHHHHHHHHHC---CCCHHHHHHHHHHHHHCCCCTTSTTCTTCCCH---HHHTS-------CEECCCCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH---HHHCC-------CCCCCCCCCC
T ss_conf 4558887699999999986227747599999999999829789987081379879---97454-------7765577668
Q ss_pred HHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCEEEECCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCEECCCCCHHH
Q ss_conf 87765176511111102344443100012135022020056787479088558998777789886202211245653146
Q gi|254781059|r 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189 (489)
Q Consensus 110 ~tf~kLgip~~e~~~l~g~~~~~v~v~~~~ds~~v~~~l~~~L~~~GVi~~~l~eA~~~~p~lv~~~~~~~~~~~~~~f~ 189 (489)
..+....++..+. ...++++++++... ..+ .++...++++.+++++..+++.+++|+
T Consensus 73 ~~~~~~~~~~~~~-------~~~~~v~g~~~~~~------~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (435)
T 1vh4_A 73 PQQRDALALTLDS-------VRLVFVDGRYVPAL------SDA----------TEGSGYEVSINDDRQGLPDAIQAEVFL 129 (435)
T ss_dssp HHHHHHHCCCCCS-------EEEEEETTEECGGG------SCC----------CTTSSCEEEEESCCTTCCCCSSCCHHH
T ss_pred CHHHHHCCCCCCC-------EEEEEECCEECCCC------CCC----------CCCCCEEEECHHHHHHHHHHHHHHHHH
T ss_conf 0021000134676-------05997788881201------567----------556760762377775305444225789
Q ss_pred HHHHHHHCCCEEEEECCCCCCCCCEEEEEEEC----CCCCEECCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEE
Q ss_conf 68876423843887347741342127999965----88840022148997277249999615676544444433058998
Q gi|254781059|r 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN----EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELV 265 (489)
Q Consensus 190 aLn~A~~~~G~fi~Vp~gv~v~~PI~~~~~~~----~~~~~~f~r~lIi~ee~S~v~~iE~~~s~~~~~~~~~~~v~Ei~ 265 (489)
+||.|++++|+|||||+|+++++||+++|... .....+++|++|++|+||+++++|+|.++. ...++|++++|++
T Consensus 130 aln~a~~~~g~~i~v~~~~~~~~Pi~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~iie~~~~~~-~~~~~~~~~~ei~ 208 (435)
T 1vh4_A 130 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLN-DARHFTGARFTIN 208 (435)
T ss_dssp HHHHHHCSCEEEEEECTTCCCSSCEEEEEEECCCSSSCEEEEEEEEEEEECTTCEEEEEEEEEESS-SSCEEEEEEEEEE
T ss_pred HHHHHHCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCC-CHHHHCCCEEEEE
T ss_conf 987623023320101452475045303675036454444420157899742530345555421221-0010004216898
Q ss_pred ECCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEEEECCCCEEEEEEEEEECC
Q ss_conf 66995899999630475531144874640146786304630389988751463478853899827872799998776259
Q gi|254781059|r 266 ALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345 (489)
Q Consensus 266 vg~nA~v~~~~iQn~~~~~~~~~~~~~~~~t~r~~~~~~~a~~~~~~~~lG~~~~r~~~~~~L~G~~a~~~~~gi~l~~~ 345 (489)
+++||+|+|+.+|+|.. +.+++.+.++.+ +++|+++|+.+.+|++++|.++.+.|.|++|+++++|++++.+
T Consensus 209 ~~~~A~l~~~~i~~~~~-------~~~~~~~~~~~~-~~~a~~~~~~~~~g~~~~~~~~~~~l~g~~a~~~~~g~~~~~~ 280 (435)
T 1vh4_A 209 VAANAHLQHIKLAFENP-------LSHHFAHNDLLL-AEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVK 280 (435)
T ss_dssp ECTTCEEEEEEEECCCT-------TCEEEEEEEEEE-CTTCEEEEEEEECCCSEEEEEEEEEECSTTCEEEEEEEECCCT
T ss_pred ECCCCEEEEHHHHHCCC-------CCCCCCHHHHHH-CCCCCEEEEEECCCCCEEEEECCCCCCCCHHHEEEEECCCCCC
T ss_conf 41443343001343034-------432120222102-3565238986415651111001111440011100110245663
Q ss_pred CEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCEE
Q ss_conf 86899721899836766110100001058946899401473388658743022105884598548622368983487568
Q gi|254781059|r 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425 (489)
Q Consensus 346 ~Q~~D~~~~v~H~~p~t~S~~~~K~i~~d~s~~~f~G~i~v~~~A~~t~~~~~~~~LlLs~~a~~~s~P~LeI~~ddv~~ 425 (489)
+|++|+++.|+|.||+|+|++++|||+.|+|+++|+|+|+|.++|++|+|+|.|++||||++|+++|+|.|||++|||+|
T Consensus 281 ~q~~d~~~~v~h~~~~t~s~~~~k~vl~d~s~~vf~G~i~i~~~A~~s~a~q~~~~LlLs~~A~~~s~P~LeI~~dDV~~ 360 (435)
T 1vh4_A 281 NEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKC 360 (435)
T ss_dssp TCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEEEEEEEEEEECSTTCEEEEEEEEEECCSSEEE
T ss_pred CHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEEEECCCCEEEECCEEEEECCCEEE
T ss_conf 03645432220155532220021033336862698544033666316676765540650588416656238996397269
Q ss_pred EEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHCC
Q ss_conf 87532024799999999837889899999999998999988589689999-99999987013
Q gi|254781059|r 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLEG 486 (489)
Q Consensus 426 ~H~Atvg~id~e~LFYL~sRGi~~~~A~~liv~gF~~~v~~~ip~e~~~e-~~~li~~~~e~ 486 (489)
+||||||+||+|||||||||||++++|++|||.||+.+++++||.|..++ +...|+.+|.+
T Consensus 361 sHgAtvG~id~e~LFYL~SRGi~~~~A~~Llv~gF~~~vl~~i~~e~lr~~i~~~i~~~l~~ 422 (435)
T 1vh4_A 361 SHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPG 422 (435)
T ss_dssp EEEEEEECCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSTT
T ss_pred EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 94021467898999999876999999999999998999998698599999999999986114