HHsearch results for GI: 254781059 and protein with PDBid: 1vh4_A
>1vh4_A SUFD protein; structural genomics, protein binding protein; 1.75A {Escherichia coli} SCOP: b.80.6.1 PDB: 2zu0_A*
Probab=100.00 E-value=0 Score=602.81 Aligned_cols=402 Identities=17% Similarity=0.175 Sum_probs=329.2
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH
Q ss_conf 99986329988999999999999996887786658766568200031005653334332101587888877651765111
Q gi|254781059|r 42 RFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121 (489)
Q Consensus 42 ~~iS~~k~EP~Wl~e~R~~Al~~f~~l~~P~W~~~~l~~i~~~~i~~~~~p~~~~~~~sld~v~~ei~~tf~kLgip~~e 121 (489)
+.+...+++|. ...|++||+.|.++|+|+ .+.+.|+|+++.........+... +..+.....+. .
T Consensus 17 ~~~~~~~~~~~--~~~~~~~~~~f~~~GlPt---~K~E~WKyT~l~~l~~~~~~~~~~---~~~~~~~~~~~---~---- 81 (435)
T 1vh4_A 17 HHLFEAEGTKR--SPQAQQHLQQLLRTGLPT---RKHENWKYTPLEGLINSQFVSIAG---EISPQQRDALA---L---- 81 (435)
T ss_dssp HHHHHC---CC--CHHHHHHHHHHHHHCCCC---TTSTTCTTCCCHHHHTSCEECCCC---CCCHHHHHHHC---C----
T ss_pred HHHHHHCCCCC--CHHHHHHHHHHHHHCCCC---CCCCCEECCCHHHHHCCCCCCCCC---CCCHHHHCCCC---C----
T ss_conf 99998528745--099999999999838889---986272059779974457765577---67801201122---3----
Q ss_pred HHHHCCCCCCCCEEEEEECCEEEECCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCEE
Q ss_conf 11102344443100012135022020056787479088558998777789886202211245653146688764238438
Q gi|254781059|r 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201 (489)
Q Consensus 122 ~~~l~g~~~~~v~v~~~~ds~~v~~~l~~~L~~~GVi~~~l~eA~~~~p~lv~~~~~~~~~~~~~~f~aLn~A~~~~G~f 201 (489)
.......++++++++.. +.+.....|+.++.++++.. .++ ....++|++||.|++++|.+
T Consensus 82 ----~~~~~~ivfvnG~~~~~-----lS~~~e~~~i~i~~~~~~~~-~~~----------~~~~~~~~~Ln~a~~~~g~~ 141 (435)
T 1vh4_A 82 ----TLDSVRLVFVDGRYVPA-----LSDATEGSGYEVSINDDRQG-LPD----------AIQAEVFLHLTESLAQSVTH 141 (435)
T ss_dssp ----CCCSEEEEEETTEECGG-----GSCCCTTSSCEEEEESCCTT-CCC----------CSSCCHHHHHHHHHCSCEEE
T ss_pred ----CCCCEEEEEECCEECHH-----HCCCCCCCCEEEECHHHHHH-HHH----------HHCCCHHHHHHHHHHCCEEE
T ss_conf ----47853899999998132-----26775568729952677654-044----------43010779998865346479
Q ss_pred EEECCCCCCCCCEEEEEEECCCC----CEECCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEE
Q ss_conf 87347741342127999965888----40022148997277249999615676544444433058998669958999996
Q gi|254781059|r 202 VYIPKGVRCPMELSTYFRINEKG----TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277 (489)
Q Consensus 202 i~Vp~gv~v~~PI~~~~~~~~~~----~~~f~r~lIi~ee~S~v~~iE~~~s~~~~~~~~~~~v~Ei~vg~nA~v~~~~i 277 (489)
|+||+|++++.||++++..+... ...+||++|++++||+++++|.|.+.. ...++++.++|+++++||+|+|+.+
T Consensus 142 I~V~~n~~~~~PI~I~~~~~~~~~~~~~~~~~r~~I~v~~ns~vtIie~~~~~~-~~~~~~n~v~ei~l~enA~L~~~~i 220 (435)
T 1vh4_A 142 IAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLN-DARHFTGARFTINVAANAHLQHIKL 220 (435)
T ss_dssp EEECTTCCCSSCEEEEEEECCCSSSCEEEEEEEEEEEECTTCEEEEEEEEEESS-SSCEEEEEEEEEEECTTCEEEEEEE
T ss_pred EEEECCEECCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEEECCC-CCCCEEEEEEEEEEECCEEEEEEEE
T ss_conf 997034001564599996124466555303467899974898527999750378-6410231369999807808999998
Q ss_pred EECCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEEEE
Q ss_conf 30475531144874640146786304630389988751463478853899827872799998776259868997218998
Q gi|254781059|r 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357 (489)
Q Consensus 278 Qn~~~~~~~~~~~~~~~~t~r~~~~~~~a~~~~~~~~lG~~~~r~~~~~~L~G~~a~~~~~gi~l~~~~Q~~D~~~~v~H 357 (489)
|+|.. +.+++.+.++.+ +++|.++|+++.+|+..+|.++.+.|.|+||.++++|++++.++|++|+++.++|
T Consensus 221 q~~~~-------~~~~~~~~~~~~-~~~S~~~~~~~~~g~~~~r~~~~~~L~G~ga~~~~~g~~~~~~~q~~D~~~~i~H 292 (435)
T 1vh4_A 221 AFENP-------LSHHFAHNDLLL-AEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEH 292 (435)
T ss_dssp ECCCT-------TCEEEEEEEEEE-CTTCEEEEEEEECCCSEEEEEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEE
T ss_pred ECCCC-------CCCEEEEEEEEE-CCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEE
T ss_conf 50577-------541000236886-4787369988851774147620111456643045666772589868852100042
Q ss_pred ECCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEECCCCHH
Q ss_conf 36766110100001058946899401473388658743022105884598548622368983487568875320247999
Q gi|254781059|r 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437 (489)
Q Consensus 358 ~~p~t~S~~~~K~i~~d~s~~~f~G~i~v~~~A~~t~~~~~~~~LlLs~~a~~~s~P~LeI~~ddv~~~H~Atvg~id~e 437 (489)
.+|+|+|+|++|||+.|+|+++|+|+|.|.++|++|+|+|.|++||||++|+++|+|.|||++|||+|+||||||+||+|
T Consensus 293 ~~~~t~S~~~~k~Vl~d~s~~vf~G~i~I~~~A~~t~a~q~~~~llls~~a~~~s~P~LeI~~ddV~~sHgatvg~id~e 372 (435)
T 1vh4_A 293 NKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDE 372 (435)
T ss_dssp CSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEEEEEEEEEEECSTTCEEEEEEEEEECCSSEEEEEEEEEECCCHH
T ss_pred CCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHEECEEEECCCCEEEECEEEEEECCCEEEEEEEECCCCCHH
T ss_conf 37980688721023226870499630200555126666320043981488348765048995397379951324678989
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHCCC
Q ss_conf 999998378898999999999989999885896899-99999999870135
Q gi|254781059|r 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA-VEAQKLIDISLEGS 487 (489)
Q Consensus 438 ~LFYL~sRGi~~~~A~~liv~gF~~~v~~~ip~e~~-~e~~~li~~~~e~~ 487 (489)
||||||||||++++|++|||.||+.||+++||.|.. ..+..+|+.+|+|.
T Consensus 373 ~lfYL~SRGi~~~~A~~llv~gF~~~v~~~i~~~~l~~~v~~~i~~~l~~~ 423 (435)
T 1vh4_A 373 QIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPGG 423 (435)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSTTC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCH
T ss_conf 999998769999999999999979999986996999999999999874130