BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781059|ref|YP_003065472.1| cysteine desulfurase activator
complex subunit SufB [Candidatus Liberibacter asiaticus str. psy62]
(489 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|296445836|ref|ZP_06887788.1| FeS assembly protein SufB [Methylosinus trichosporium OB3b]
gi|296256664|gb|EFH03739.1| FeS assembly protein SufB [Methylosinus trichosporium OB3b]
Length = 489
Score = 605 bits (1559), Expect = e-171, Method: Composition-based stats.
Identities = 388/489 (79%), Positives = 439/489 (89%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +ETV +V +IDVD YKYGF T+I+ +KAPKGL+EDI+RFISAKKNEP+W+ EWRL
Sbjct: 1 MAARQETVARVEEIDVDAYKYGFTTDIESEKAPKGLSEDIVRFISAKKNEPEWLTEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P WAR+ YPAID+ DLYYY+APKS GP+SLD+VDPELLRTYEKLGIP+R
Sbjct: 61 AYRRWLTMEEPKWARVDYPAIDYQDLYYYSAPKSTPGPKSLDEVDPELLRTYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQE LAGV+ K+AVDAVFDSVSV TTF+EEL K+GVIF PISEA+ EHP+LV+KYL +V
Sbjct: 121 EQEALAGVEQRKIAVDAVFDSVSVATTFREELSKAGVIFCPISEAVREHPELVRKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DNFYA LNSAVF+DGSFVYIP GVRCPMELSTYFRINEK TGQFERTLIIAD GSY
Sbjct: 181 VPVTDNFYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIADAGSY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+RDENQLHAAVVELVALD+AEIKYSTVQNWYPGDS+GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPKRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDSEGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG S ISWTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIA+SNG+QQ+DSGTKM+HL K
Sbjct: 301 CRGKNSHISWTQVETGSAVTWKYPSCILRGDNSQGEFYSIAVSNGYQQVDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT SRI+SKGISAG S NTYRG+VS HR A +RNFT CDSLLIG+ CGAHT+PY+ESKN
Sbjct: 361 NTKSRIISKGISAGNSQNTYRGQVSAHRKAEGARNFTNCDSLLIGDKCGAHTVPYLESKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+S EHEATTSKIS++ LFYC+QRG+ EE A ALIVNGFVR+VLQKLPMEFAVEAQKLI
Sbjct: 421 ASAVFEHEATTSKISEDQLFYCMQRGLSEEEATALIVNGFVRDVLQKLPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
+SLEGSVG
Sbjct: 481 AVSLEGSVG 489
>gi|15965488|ref|NP_385841.1| cysteine desulfurase activator complex subunit SufB [Sinorhizobium
meliloti 1021]
gi|307302609|ref|ZP_07582365.1| FeS assembly protein SufB [Sinorhizobium meliloti BL225C]
gi|307318456|ref|ZP_07597890.1| FeS assembly protein SufB [Sinorhizobium meliloti AK83]
gi|15074669|emb|CAC46314.1| Probable ABC transporter [Sinorhizobium meliloti 1021]
gi|306895796|gb|EFN26548.1| FeS assembly protein SufB [Sinorhizobium meliloti AK83]
gi|306902973|gb|EFN33564.1| FeS assembly protein SufB [Sinorhizobium meliloti BL225C]
Length = 489
Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats.
Identities = 402/489 (82%), Positives = 452/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR+IDVDQYKYGFET I++D APKGL+EDIIR IS+KKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRQIDVDQYKYGFETTIEMDLAPKGLSEDIIRLISSKKNEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRW TM++P+WAR+RYP IDF+D++YYAAPK GP+SLD+VDPELL+ YEKLGIP++
Sbjct: 61 AYRRWQTMEEPTWARVRYPKIDFNDIHYYAAPKGTTGPKSLDEVDPELLKVYEKLGIPLK 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ SK+AVDAVFDSVSVVTTFKEELKK+GVIFM ISEA+ EHPDLV+KYL TV
Sbjct: 121 EQEILAGVEKSKIAVDAVFDSVSVVTTFKEELKKAGVIFMSISEAMREHPDLVRKYLGTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINEK TGQFERTLIIADEG+Y
Sbjct: 181 VPQSDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVEL+ALD+AEIKYSTVQNWYPGD QGKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDKQGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRI+SKGI+AG S NTYRG+VS HR A ++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIISKGIAAGVSENTYRGQVSAHRKAENARNFTQCDSLLIGDRCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIPEEAAIALIVNGFV+EV+Q+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPEEAAIALIVNGFVKEVIQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|227822091|ref|YP_002826062.1| cysteine desulfurase activator complex subunit SufB [Sinorhizobium
fredii NGR234]
gi|227341091|gb|ACP25309.1| transport protein associated with Fe-S cluster assembly SufB
[Sinorhizobium fredii NGR234]
Length = 489
Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats.
Identities = 401/489 (82%), Positives = 453/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR+IDVDQYKYGFET I++DKAPKGL+EDIIR ISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRQIDVDQYKYGFETTIEMDKAPKGLSEDIIRLISAKKNEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWLTM +PSWAR+RYP IDF++++YYAAPK GP+SLD+VDPELL+ YEKLGIP++
Sbjct: 61 AYQRWLTMDEPSWARVRYPKIDFNEIHYYAAPKGTTGPKSLDEVDPELLKVYEKLGIPLK 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ +K+AVDAVFDSVSVVTTFKEELKK+GVIFM ISEA+ EHPDLV+KYL TV
Sbjct: 121 EQEILAGVEKTKIAVDAVFDSVSVVTTFKEELKKAGVIFMSISEAMREHPDLVRKYLGTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINEK TGQFERTLIIADEG+Y
Sbjct: 181 VPQSDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVEL+ALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDKHGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL K
Sbjct: 301 CRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAVSNGHQQVDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRI+SKGI+AG S+NTYRG+VS HR A ++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIISKGIAAGVSDNTYRGQVSAHRKAENARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIPEEAAIALIVNGFV+EV+Q+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPEEAAIALIVNGFVKEVIQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|163759515|ref|ZP_02166600.1| hypothetical protein HPDFL43_09187 [Hoeflea phototrophica DFL-43]
gi|162283112|gb|EDQ33398.1| hypothetical protein HPDFL43_09187 [Hoeflea phototrophica DFL-43]
Length = 489
Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats.
Identities = 395/489 (80%), Positives = 447/489 (91%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR+IDVDQYKYGFET I+ D APKGLNED IR ISAKK+EP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRQIDVDQYKYGFETVIESDTAPKGLNEDTIRMISAKKDEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++RW TM++PSWAR+ YP IDF D++YY+APK GP+S+DDVDPELLR YEKLGIP+R
Sbjct: 61 AFKRWQTMEEPSWARVDYPKIDFQDIHYYSAPKGTAGPKSIDDVDPELLRVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGVQ SK+AVDAVFDSVSVVTTFK+EL ++GVIFM ISEA+ EHP+LV+KY+ TV
Sbjct: 121 EQEILAGVQQSKIAVDAVFDSVSVVTTFKKELAQAGVIFMSISEAMREHPELVQKYIGTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINEK TGQFERTLIIA+EG+Y
Sbjct: 181 VPVTDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVEL+A+D+AEIKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELIAMDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG+QQIDSGTKM+HL K
Sbjct: 301 CRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAVSNGYQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSLLIGN CGAHT+PYIE+KN
Sbjct: 361 NTSSRIISKGISAGHSNNTYRGQVSAHRKAENARNFTQCDSLLIGNQCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCL RGIPEE AIALIVNGFV+EV+Q+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLARGIPEEEAIALIVNGFVKEVIQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|159184936|ref|NP_354808.2| cysteine desulfurase activator complex subunit SufB [Agrobacterium
tumefaciens str. C58]
gi|325293226|ref|YP_004279090.1| FeS assembly protein SufB [Agrobacterium sp. H13-3]
gi|159140214|gb|AAK87593.2| ABC transporter subunit [Agrobacterium tumefaciens str. C58]
gi|325061079|gb|ADY64770.1| FeS assembly protein SufB [Agrobacterium sp. H13-3]
Length = 489
Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats.
Identities = 398/489 (81%), Positives = 452/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR+IDVDQYKYGFET I+VDKAPKGL+E++IRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRQIDVDQYKYGFETEIEVDKAPKGLSEEVIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWLTM++P+WAR+ YP IDF+DLYYYAAPKS GP+SLD+VDPELL+ YEKLGIP++
Sbjct: 61 AYKRWLTMEEPTWARVSYPKIDFNDLYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLK 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ +VAVDAVFDSVSVVTTFK EL K+GVIFM ISEA+ E+PDLVKKYL +V
Sbjct: 121 EQEILAGVENRRVAVDAVFDSVSVVTTFKAELAKAGVIFMSISEAVREYPDLVKKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYA LNSAVFTDGSFV++PKGVRCPMELSTYFRINEK TGQFERTLIIA+EG+Y
Sbjct: 181 VPQTDNFYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKNTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGNRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRI++KGI+AGFS N YRG+VS HR A ++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIIAKGIAAGFSENVYRGQVSAHRKATNTRNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
SS + EHEATTSKIS++ LFYCLQRGIPEE+AIALIVNGFV++V+Q+LPMEFAVEAQKLI
Sbjct: 421 SSAHFEHEATTSKISEDQLFYCLQRGIPEESAIALIVNGFVKDVIQQLPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|150396681|ref|YP_001327148.1| cysteine desulfurase activator complex subunit SufB [Sinorhizobium
medicae WSM419]
gi|150028196|gb|ABR60313.1| FeS assembly protein SufB [Sinorhizobium medicae WSM419]
Length = 489
Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats.
Identities = 405/489 (82%), Positives = 453/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR+IDVDQYKYGFET I++DKAPKGL+EDIIR IS+KKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRQIDVDQYKYGFETTIEMDKAPKGLSEDIIRLISSKKNEPEWMLEWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RW TM++PSWAR+RYP IDF+DL+YYAAPKS GP+SLD+VDPELLR YEKLGIP++
Sbjct: 61 AYSRWQTMEEPSWARVRYPKIDFNDLHYYAAPKSTSGPKSLDEVDPELLRVYEKLGIPLK 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ S++AVDAVFDSVSVVTTFKEELKK+GVIFM ISEA+ EHPDLV+KYL TV
Sbjct: 121 EQEILAGVEKSRIAVDAVFDSVSVVTTFKEELKKAGVIFMSISEAMREHPDLVRKYLGTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINEK TGQFERTLIIADEG+Y
Sbjct: 181 VPQSDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTGQFERTLIIADEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVEL+ALD+AEIKYSTVQNWYPGD QGKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDKQGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRI+SKGI+AG S NTYRG+VS HR A ++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIISKGIAAGVSENTYRGQVSAHRKAENARNFTQCDSLLIGDRCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIPEEAAIALIVNGFV+EV+Q+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPEEAAIALIVNGFVKEVIQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|323136294|ref|ZP_08071376.1| FeS assembly protein SufB [Methylocystis sp. ATCC 49242]
gi|322398368|gb|EFY00888.1| FeS assembly protein SufB [Methylocystis sp. ATCC 49242]
Length = 489
Score = 597 bits (1539), Expect = e-168, Method: Composition-based stats.
Identities = 392/489 (80%), Positives = 440/489 (89%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +ETV +V IDVD YKYGF T+I+ +KAPKGL+EDI+RFISAKKNEP+W+ EWRL
Sbjct: 1 MAARQETVARVESIDVDAYKYGFTTDIESEKAPKGLSEDIVRFISAKKNEPEWLTEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP+ID+ DLYYY+APKS GP+SLD+VDPELLRTYEKLGIP+R
Sbjct: 61 AYRRWLTMSEPNWARVHYPSIDYQDLYYYSAPKSTPGPKSLDEVDPELLRTYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+T KVAVDAVFDSVSV TTFKEEL K+GVIF PISEA+ HP+LV+KYL +V
Sbjct: 121 EQEILAGVETRKVAVDAVFDSVSVATTFKEELAKAGVIFCPISEAVQTHPELVRKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DNFYA LNSAVF+DGSFVY+PKGVRCPMELSTYFRINE+ TGQFERTLIIADEGSY
Sbjct: 181 VPVTDNFYATLNSAVFSDGSFVYVPKGVRCPMELSTYFRINEQKTGQFERTLIIADEGSY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+RDENQLHAAVVEL+ALD+AEIKYSTVQNWYPGDS+G+GGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPKRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDSEGRGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG S ISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG+QQ+DSGTKM+HL K
Sbjct: 301 CRGRNSHISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAVSNGYQQVDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT SRIVSKGISAG S NTYRG+VS HR A +RNFTQCDSLLIG++CGAHT+PYIESKN
Sbjct: 361 NTKSRIVSKGISAGKSQNTYRGQVSAHRKAEGARNFTQCDSLLIGHDCGAHTVPYIESKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S EHEATTSKISD+ LFY +QRG+ E A ALIVNGFVREVLQ+LPMEFAVEAQKLI
Sbjct: 421 PSAQFEHEATTSKISDDQLFYAMQRGLSAEEATALIVNGFVREVLQQLPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 SISLEGSVG 489
>gi|110634132|ref|YP_674340.1| cysteine desulfurase activator complex subunit SufB [Mesorhizobium
sp. BNC1]
gi|110285116|gb|ABG63175.1| Iron-regulated ABC transporter membrane component SufB
[Chelativorans sp. BNC1]
Length = 503
Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats.
Identities = 401/503 (79%), Positives = 446/503 (88%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I+ DKAPKGLNEDI+R ISAKK EP+WM EWRL
Sbjct: 1 MPAVQETIDQVRLIDVDQYKYGFETLIESDKAPKGLNEDIVRLISAKKGEPEWMTEWRLN 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRWLTM++PSWAR+ YP IDF D++YYAAPK+ GP SLD+VDPELLRTYEKLGIP++
Sbjct: 61 AFRRWLTMEEPSWARVSYPKIDFQDIHYYAAPKTQAGPTSLDEVDPELLRTYEKLGIPLK 120
Query: 121 EQEILAGV--------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV + +VAVDAVFDSVSVVTTFK+EL K+GVIF ISEAI
Sbjct: 121 EQEILAGVRKPAEGEDAGDNVYASGRVAVDAVFDSVSVVTTFKKELAKAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP+LV+KYL +VVP DNFYA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINEK TG
Sbjct: 181 REHPELVRKYLGSVVPPTDNFYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINEKNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD Q
Sbjct: 241 QFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKQ 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRGE S GEFYSIA+SNG
Sbjct: 301 GKGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCLLRGEGSRGEFYSIAVSNGH 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL KNT+SRI+SKGISAG SNNTYRG+VSVHR A ++RNFT CDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGKNTSSRIISKGISAGNSNNTYRGQVSVHRKAENARNFTNCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+CGAHT+PYIE+KNS+ +EHEATTSKISD+ FY +QRGIPEE AIALIVNGFV++V+Q
Sbjct: 421 DCGAHTVPYIEAKNSTAQIEHEATTSKISDDQKFYVMQRGIPEEEAIALIVNGFVKDVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 ELPMEFAVEAQKLIGISLEGSVG 503
>gi|222086103|ref|YP_002544635.1| FeS assembly protein SufB [Agrobacterium radiobacter K84]
gi|221723551|gb|ACM26707.1| FeS assembly protein SufB [Agrobacterium radiobacter K84]
Length = 489
Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats.
Identities = 401/489 (82%), Positives = 450/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDI+RFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETIIEMDKAPKGLSEDIVRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+ +P+WAR+ YP IDF+D+YYYAAPK+ GP SLD+VDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLDEPTWARVDYPKIDFNDIYYYAAPKTTPGPTSLDEVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ K+AVDAVFDSVSVVTTFKEELKK+GVIFM ISEA+ EHPDLV+KYL TV
Sbjct: 121 EQEILAGVERPKIAVDAVFDSVSVVTTFKEELKKAGVIFMSISEAVREHPDLVRKYLGTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+YA LNSAVFTDGSFV++PKGVRCPMELSTYFRINEK TGQFERTLIIA+EG+Y
Sbjct: 181 VPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKNTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL K
Sbjct: 301 CRGHRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQVDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRIVSKGI+AG S NTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIVSKGIAAGVSQNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIP EAAIALIVNGFV+EVLQ+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|254719029|ref|ZP_05180840.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
83/13]
gi|265984019|ref|ZP_06096754.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
83/13]
gi|306840083|ref|ZP_07472869.1| FeS assembly protein SufB [Brucella sp. NF 2653]
gi|264662611|gb|EEZ32872.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
83/13]
gi|306404811|gb|EFM61104.1| FeS assembly protein SufB [Brucella sp. NF 2653]
Length = 507
Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats.
Identities = 398/507 (78%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVEL+A++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELIAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKM+HL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMIHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|209549494|ref|YP_002281411.1| cysteine desulfurase activator complex subunit SufB [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209535250|gb|ACI55185.1| FeS assembly protein SufB [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 489
Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats.
Identities = 404/489 (82%), Positives = 453/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF+D+YYYAAPKS GP+SLD+VDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVDYPKIDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV K+AVDAVFDSVSVVTTFK ELKK+GVIFM ISEAI E+PDLV+KYL +V
Sbjct: 121 EQEILAGVDKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREYPDLVRKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+YA LNSAVFTDGSFV++PKGVRCPMELSTYFRINEKGTGQFERTLIIA+EG+Y
Sbjct: 181 VPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD +GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGDRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRIVSKGI+AG SNNTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIP EAAIALIVNGFV+EVLQ+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 SISLEGSVG 489
>gi|116252328|ref|YP_768166.1| cysteine desulfurase activator complex subunit SufB [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256976|emb|CAK08070.1| putative iron-sulfur cluster formation subunit protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 489
Score = 594 bits (1532), Expect = e-167, Method: Composition-based stats.
Identities = 403/489 (82%), Positives = 453/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF+D+YYYAAPKS GP+SLD+VDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVDYPKIDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ K+AVDAVFDSVSVVTTFK ELKK+GVIFM ISEAI E+P+LV+KYL +V
Sbjct: 121 EQEILAGVEKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREYPELVQKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+YA LNSAVFTDGSFV++PKGVRCPMELSTYFRINEKGTGQFERTLIIA+EG+Y
Sbjct: 181 VPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGDRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRIVSKGI+AG SNNTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIP EAAIALIVNGFV+EVLQ+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 SISLEGSVG 489
>gi|86357868|ref|YP_469760.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
CFN 42]
gi|86281970|gb|ABC91033.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
Length = 489
Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats.
Identities = 404/489 (82%), Positives = 454/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EPDWMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPDWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF+D++YYAAPKS GP+SLD+VDPELL+ Y+KLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVNYPKIDFNDIHYYAAPKSAPGPKSLDEVDPELLKVYDKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ K+AVDAVFDSVSVVTTFK ELKK+GVIFM ISEAI EHPDLV+KYL +V
Sbjct: 121 EQEILAGVEKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREHPDLVRKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+YA LNSAVFTDGSFV++PKGVRCPMELSTYFRINEKGTGQFERTLIIA+EG+Y
Sbjct: 181 VPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD +GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRIVSKGI+AG SNNTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIP EAAIALIVNGFV+EVLQ+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 SISLEGSVG 489
>gi|239831805|ref|ZP_04680134.1| FeS assembly protein SufB [Ochrobactrum intermedium LMG 3301]
gi|239824072|gb|EEQ95640.1| FeS assembly protein SufB [Ochrobactrum intermedium LMG 3301]
Length = 507
Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats.
Identities = 400/507 (78%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ +KAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEAEKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYYAAPK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYAAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPSDNVYASGRVAVDAVFDSVSVVTTFKEELAKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVEL+AL+NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELIALENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|62289872|ref|YP_221665.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 1 str. 9-941]
gi|82699799|ref|YP_414373.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis biovar Abortus 2308]
gi|189024114|ref|YP_001934882.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus S19]
gi|225627417|ref|ZP_03785454.1| FeS assembly protein SufB [Brucella ceti str. Cudo]
gi|237815366|ref|ZP_04594364.1| FeS assembly protein SufB [Brucella abortus str. 2308 A]
gi|254693658|ref|ZP_05155486.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 3 str. Tulya]
gi|254706863|ref|ZP_05168691.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M163/99/10]
gi|254710028|ref|ZP_05171839.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis B2/94]
gi|254714030|ref|ZP_05175841.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M644/93/1]
gi|254716912|ref|ZP_05178723.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M13/05/1]
gi|254730209|ref|ZP_05188787.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 4 str. 292]
gi|256031523|ref|ZP_05445137.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M292/94/1]
gi|256061032|ref|ZP_05451188.1| cysteine desulfurase activator complex subunit SufB [Brucella
neotomae 5K33]
gi|256254927|ref|ZP_05460463.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
B1/94]
gi|256369357|ref|YP_003106865.1| cysteine desulfurase activator complex subunit SufB [Brucella
microti CCM 4915]
gi|260168655|ref|ZP_05755466.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
F5/99]
gi|260545384|ref|ZP_05821125.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus NCTC 8038]
gi|260757898|ref|ZP_05870246.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 4 str. 292]
gi|261213925|ref|ZP_05928206.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 3 str. Tulya]
gi|261218719|ref|ZP_05933000.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M13/05/1]
gi|261222109|ref|ZP_05936390.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
B1/94]
gi|261314329|ref|ZP_05953526.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M163/99/10]
gi|261317575|ref|ZP_05956772.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis B2/94]
gi|261321783|ref|ZP_05960980.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M644/93/1]
gi|261325031|ref|ZP_05964228.1| cysteine desulfurase activator complex subunit SufB [Brucella
neotomae 5K33]
gi|261758129|ref|ZP_06001838.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
F5/99]
gi|265988609|ref|ZP_06101166.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M292/94/1]
gi|62196004|gb|AAX74304.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615900|emb|CAJ10904.1| Protein of unknown function UPF0051 [Brucella melitensis biovar
Abortus 2308]
gi|189019686|gb|ACD72408.1| hypothetical protein BAbS19_I08870 [Brucella abortus S19]
gi|225617422|gb|EEH14467.1| FeS assembly protein SufB [Brucella ceti str. Cudo]
gi|237790203|gb|EEP64413.1| FeS assembly protein SufB [Brucella abortus str. 2308 A]
gi|255999517|gb|ACU47916.1| cysteine desulfurase activator complex subunit SufB [Brucella
microti CCM 4915]
gi|260096791|gb|EEW80666.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus NCTC 8038]
gi|260668216|gb|EEX55156.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 4 str. 292]
gi|260915532|gb|EEX82393.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 3 str. Tulya]
gi|260920693|gb|EEX87346.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
B1/94]
gi|260923808|gb|EEX90376.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M13/05/1]
gi|261294473|gb|EEX97969.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M644/93/1]
gi|261296798|gb|EEY00295.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis B2/94]
gi|261301011|gb|EEY04508.1| cysteine desulfurase activator complex subunit SufB [Brucella
neotomae 5K33]
gi|261303355|gb|EEY06852.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M163/99/10]
gi|261738113|gb|EEY26109.1| cysteine desulfurase activator complex subunit SufB [Brucella sp.
F5/99]
gi|264660806|gb|EEZ31067.1| cysteine desulfurase activator complex subunit SufB [Brucella
pinnipedialis M292/94/1]
Length = 507
Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats.
Identities = 400/507 (78%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|241204827|ref|YP_002975923.1| cysteine desulfurase activator complex subunit SufB [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858717|gb|ACS56384.1| FeS assembly protein SufB [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 489
Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats.
Identities = 402/489 (82%), Positives = 453/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF+D+YYYAAPKS GP+SLD+VDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVDYPKIDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ K+AVDAVFDSVSVVTTFK ELKK+GVIFM ISEAI E+P+LV+KYL +V
Sbjct: 121 EQEILAGVERPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREYPELVQKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+YA LNSAVFTDGSFV++PKGVRCPMELSTYFRINEKGTGQFERTLIIA+EG+Y
Sbjct: 181 VPTTDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGDRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRIVSKGI+AG SNNTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIP EAAIALIVNGFV+EVLQ+LPMEFA+EAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAIEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 SISLEGSVG 489
>gi|217977771|ref|YP_002361918.1| FeS assembly protein SufB [Methylocella silvestris BL2]
gi|217503147|gb|ACK50556.1| FeS assembly protein SufB [Methylocella silvestris BL2]
Length = 490
Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats.
Identities = 381/490 (77%), Positives = 438/490 (89%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+V+ IDV +YKYGF ++I+ +KAPKGLNEDI+RFISAKKNEPDW+ +WRL
Sbjct: 1 MAAVQETVDRVKSIDVSEYKYGFFSDIESEKAPKGLNEDIVRFISAKKNEPDWLTQWRLG 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRWLTM +P+WAR+ +P ID+ DLYYY+APK+ GP+SLD+VDPELL+ Y KLGIP+
Sbjct: 61 AFRRWLTMAEPTWARVDFPKIDYQDLYYYSAPKTAAGPKSLDEVDPELLKVYAKLGIPLG 120
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQEILAGV +VAVDAVFDSVSVVTTFKEEL K+GVIF PISEA+ HP+LV+KYL +
Sbjct: 121 EQEILAGVAPERRVAVDAVFDSVSVVTTFKEELAKAGVIFCPISEAVHTHPELVQKYLGS 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 181 VVPTTDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINEQNTGQFERTLIIADKGS 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RDENQLHAAVVELV ++AEIKYSTVQNWYPGDS+GKGGI+NFVTKRG
Sbjct: 241 YVSYLEGCTAPKRDENQLHAAVVELVTHEDAEIKYSTVQNWYPGDSEGKGGIFNFVTKRG 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSKISWTQ+ETGSAITWKYPSC+LRG++S GEFYSIAISNG QQ+DSGTKM+HL
Sbjct: 301 DCRGARSKISWTQVETGSAITWKYPSCILRGDESRGEFYSIAISNGRQQVDSGTKMIHLG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTSRI+SKGISAG S NTYRG+VS HR A +RNFT CDSLLIGN+CGAHT+PYIES+
Sbjct: 361 KNTTSRIISKGISAGKSQNTYRGQVSSHRKATGARNFTNCDSLLIGNSCGAHTVPYIESR 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKISD+ LFYC+QRG+ E A ALIVNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 421 NTSTQFEHEATTSKISDDQLFYCMQRGLSAEEATALIVNGFVRDVLQQLPMEFAVEAQKL 480
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 481 IAISLEGSVG 490
>gi|306840444|ref|ZP_07473204.1| FeS assembly protein SufB [Brucella sp. BO2]
gi|306289578|gb|EFM60793.1| FeS assembly protein SufB [Brucella sp. BO2]
Length = 507
Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats.
Identities = 401/507 (79%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELLRTYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLRTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|306843826|ref|ZP_07476424.1| FeS assembly protein SufB [Brucella sp. BO1]
gi|306275904|gb|EFM57620.1| FeS assembly protein SufB [Brucella sp. BO1]
Length = 507
Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats.
Identities = 399/507 (78%), Positives = 448/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELLRTYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLRTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVEL+A++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELIAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KN +SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNASSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|153009585|ref|YP_001370800.1| cysteine desulfurase activator complex subunit SufB [Ochrobactrum
anthropi ATCC 49188]
gi|151561473|gb|ABS14971.1| FeS assembly protein SufB [Ochrobactrum anthropi ATCC 49188]
Length = 507
Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats.
Identities = 399/507 (78%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ +KAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEAEKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYYAAPK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYAAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPSDNVYASGRVAVDAVFDSVSVVTTFKEELAKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVEL+A++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELIAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|190891952|ref|YP_001978494.1| ABC transporter involved in Fe-S cluster assembly, permease
[Rhizobium etli CIAT 652]
gi|190697231|gb|ACE91316.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 652]
gi|327191058|gb|EGE58111.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
Length = 489
Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats.
Identities = 403/489 (82%), Positives = 454/489 (92%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF+D++YYAAPKS GP+SLD+VDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVNYPKIDFNDIHYYAAPKSAPGPKSLDEVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV+ K+AVDAVFDSVSVVTTFK ELKK+GVIFM ISEAI E+PDLV+KYL +V
Sbjct: 121 EQEILAGVEKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREYPDLVRKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+YA LNSAVFTDGSFV++PKGVRCPMELSTYFRINEKGTGQFERTLIIA+EG+Y
Sbjct: 181 VPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD +GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL K
Sbjct: 301 CRGDRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRIVSKGI+AG SNNTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ EHEATTSKIS++ LFYCLQRGIP EAAIALIVNGFV+EVLQ+LPMEFAVEAQKLI
Sbjct: 421 STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 SISLEGSVG 489
>gi|222148789|ref|YP_002549746.1| cysteine desulfurase activator complex subunit SufB [Agrobacterium
vitis S4]
gi|221735775|gb|ACM36738.1| ABC transporter subunit [Agrobacterium vitis S4]
Length = 489
Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats.
Identities = 409/489 (83%), Positives = 456/489 (93%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR+IDVDQYKYGFET I+VDKAPKGL+EDI+RFISAKKNEPDWML+WRL
Sbjct: 1 MAAVQETIDQVRQIDVDQYKYGFETMIEVDKAPKGLSEDIVRFISAKKNEPDWMLQWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWLTM++P WAR+ YP IDF+D+YYYAAPKS GP S+DDVDPELL+ YEKLGIP+R
Sbjct: 61 AYQRWLTMEEPDWARVHYPKIDFNDIYYYAAPKSTAGPTSIDDVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGVQTSK+AVDAVFDSVSVVTTFK EL K+GVIFM ISEA+ E+PDLVKKYL TV
Sbjct: 121 EQEILAGVQTSKIAVDAVFDSVSVVTTFKAELMKAGVIFMSISEAVREYPDLVKKYLGTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DN+YA LNSAVFTDGSFV+IPKGVRCPMELSTYFRINEK TGQFERTLIIA+EG+Y
Sbjct: 181 VPVTDNYYATLNSAVFTDGSFVFIPKGVRCPMELSTYFRINEKNTGQFERTLIIAEEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG+QQ+DSGTKM+HL K
Sbjct: 301 CRGARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGYQQVDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+SRI+SKGISAGFS+NTYRG+VS HR A ++RNFTQCDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NTSSRIISKGISAGFSSNTYRGQVSAHRKAENARNFTQCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
SS EHEATTSKIS++ LFYCLQRGIP+EAAIALIVNGFVREV+Q+LPMEFAVEAQKLI
Sbjct: 421 SSAQFEHEATTSKISEDQLFYCLQRGIPQEAAIALIVNGFVREVIQELPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|256113479|ref|ZP_05454313.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 3 str. Ether]
gi|265994860|ref|ZP_06107417.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 3 str. Ether]
gi|262765973|gb|EEZ11762.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 3 str. Ether]
Length = 507
Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats.
Identities = 398/507 (78%), Positives = 448/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
G+ GKGGIYNFVTKRGDC G SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GNKDGKGGIYNFVTKRGDCHGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|17987325|ref|NP_539959.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. 16M]
gi|225852442|ref|YP_002732675.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis ATCC 23457]
gi|256044599|ref|ZP_05447503.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. Rev.1]
gi|256264064|ref|ZP_05466596.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 2 str. 63/9]
gi|260563951|ref|ZP_05834437.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. 16M]
gi|265991023|ref|ZP_06103580.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. Rev.1]
gi|17983006|gb|AAL52223.1| abc transporter-associated protein [Brucella melitensis bv. 1 str.
16M]
gi|225640807|gb|ACO00721.1| FeS assembly protein SufB [Brucella melitensis ATCC 23457]
gi|260153967|gb|EEW89059.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. 16M]
gi|263001807|gb|EEZ14382.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 1 str. Rev.1]
gi|263094259|gb|EEZ18129.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis bv. 2 str. 63/9]
gi|326408956|gb|ADZ66021.1| cysteine desulfurase activator complex subunit SufB [Brucella
melitensis M28]
gi|326538670|gb|ADZ86885.1| FeS assembly protein SufB [Brucella melitensis M5-90]
Length = 507
Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats.
Identities = 399/507 (78%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
G+ GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GNKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|254781059|ref|YP_003065472.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040736|gb|ACT57532.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter asiaticus str. psy62]
Length = 489
Score = 592 bits (1525), Expect = e-167, Method: Composition-based stats.
Identities = 489/489 (100%), Positives = 489/489 (100%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL
Sbjct: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR
Sbjct: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV
Sbjct: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY
Sbjct: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK
Sbjct: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN
Sbjct: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI
Sbjct: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
DISLEGSVG
Sbjct: 481 DISLEGSVG 489
>gi|90417692|ref|ZP_01225604.1| conserved hypothetical protein with 2S-2Fe iron binding domain
[Aurantimonas manganoxydans SI85-9A1]
gi|90337364|gb|EAS51015.1| conserved hypothetical protein with 2S-2Fe iron binding domain
[Aurantimonas manganoxydans SI85-9A1]
Length = 507
Score = 592 bits (1525), Expect = e-167, Method: Composition-based stats.
Identities = 398/507 (78%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VRKIDVDQYKYGFET I++D APKGLNEDIIR ISAKK+EP WML+WRL
Sbjct: 1 MPAVQETIDQVRKIDVDQYKYGFETLIEMDVAPKGLNEDIIRLISAKKDEPQWMLDWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ RW TM+ PSWAR+ YP IDF D++YYAAPKS+ GP SLD+VDPE+LRTYEKLGIP+R
Sbjct: 61 AFERWKTMESPSWARLDYPEIDFQDIHYYAAPKSMSGPASLDEVDPEILRTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQE+LAGV + S+VAVDAVFDSVSV TTFK+EL+K+GVIFMPI
Sbjct: 121 EQEMLAGVVKPAAEPTYDEDGNEIAPRESRVAVDAVFDSVSVATTFKKELQKAGVIFMPI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LVKKYL +VVPV DNF+A +NSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVKKYLGSVVPVSDNFFATMNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL+ALD+AEIKYSTVQNWYP
Sbjct: 241 KNTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWYP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG S+ISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGKNSRISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS +R A ++RNFTQCDSL
Sbjct: 361 SNGRQQIDSGTKMLHLGKNTSSRIISKGISAGNSNNTYRGQVSANRKATNARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE KN++ EHEATTSKISD+ LFYC+QRGIPEE A+ALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEVKNATAQFEHEATTSKISDDQLFYCMQRGIPEEEAVALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
+V+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 DVIQQLPMEFAVEAQKLIGISLEGSVG 507
>gi|254689175|ref|ZP_05152429.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 6 str. 870]
gi|256257425|ref|ZP_05462961.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 9 str. C68]
gi|260754674|ref|ZP_05867022.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 6 str. 870]
gi|260883700|ref|ZP_05895314.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 9 str. C68]
gi|297248274|ref|ZP_06931992.1| FeS assembly protein SufB [Brucella abortus bv. 5 str. B3196]
gi|260674782|gb|EEX61603.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 6 str. 870]
gi|260873228|gb|EEX80297.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 9 str. C68]
gi|297175443|gb|EFH34790.1| FeS assembly protein SufB [Brucella abortus bv. 5 str. B3196]
Length = 507
Score = 592 bits (1525), Expect = e-167, Method: Composition-based stats.
Identities = 399/507 (78%), Positives = 449/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
G+ GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GEKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|23501815|ref|NP_697942.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
1330]
gi|161618887|ref|YP_001592774.1| cysteine desulfurase activator complex subunit SufB [Brucella canis
ATCC 23365]
gi|163843200|ref|YP_001627604.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
ATCC 23445]
gi|260566518|ref|ZP_05836988.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 4 str. 40]
gi|23347749|gb|AAN29857.1| conserved hypothetical protein [Brucella suis 1330]
gi|161335698|gb|ABX62003.1| FeS assembly protein SufB [Brucella canis ATCC 23365]
gi|163673923|gb|ABY38034.1| FeS assembly protein SufB [Brucella suis ATCC 23445]
gi|260156036|gb|EEW91116.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 4 str. 40]
Length = 507
Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats.
Identities = 399/507 (78%), Positives = 448/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVV TFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVATFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|163796149|ref|ZP_02190111.1| FeS assembly protein SufB [alpha proteobacterium BAL199]
gi|159178608|gb|EDP63148.1| FeS assembly protein SufB [alpha proteobacterium BAL199]
Length = 485
Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats.
Identities = 347/489 (70%), Positives = 412/489 (84%), Gaps = 4/489 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +TV +V + YKYGF T+I+ D APKGL+E IRFISAKK EP+W+LEWRL
Sbjct: 1 MAATADTVRQVEDVTGGAYKYGFVTDIESDVAPKGLDESTIRFISAKKEEPEWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ +W M +P WA++ Y ID+ D++YY+APK GP+SLD+VDPELL TY KLGIP++
Sbjct: 61 AFEQWKRMVEPEWAKVDYQRIDYQDIHYYSAPKQKDGPKSLDEVDPELLATYAKLGIPLK 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQE+LAGV VAVDAVFDSVSV TT+K+EL+K G++F ISEA+ E P+LVK+YL +V
Sbjct: 121 EQELLAGV----VAVDAVFDSVSVATTYKKELEKKGIVFCSISEAVRERPELVKRYLGSV 176
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DN++A LNSAVFTDGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLIIADEGSY
Sbjct: 177 VPVADNYFACLNSAVFTDGSFVYIPKGVRCPMELSTYFRINAQNTGQFERTLIIADEGSY 236
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELV LD+A+IKYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 237 VSYLEGCTAPQRDENQLHAAVVELVTLDDAQIKYSTVQNWYPGDENGKGGIYNFVTKRGA 296
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+AI+N QQ D+GTKM+HL K
Sbjct: 297 CRGKRSKISWTQVETGSAVTWKYPSCILQGDDSVGEFYSVAITNNAQQADTGTKMIHLGK 356
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG ++NTYRG V + + A +RN+TQCDSLLIG+ CGAHT+PYIESKN
Sbjct: 357 NTRSTIISKGISAGRADNTYRGLVRISKKAEGARNYTQCDSLLIGDKCGAHTVPYIESKN 416
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKIS++ LFYCL RG+ E A++LIVNGF +EV+++LPMEFAVEAQKLI
Sbjct: 417 PTARVEHEATTSKISEDQLFYCLSRGLSAEQAVSLIVNGFCKEVMKELPMEFAVEAQKLI 476
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 477 GISLEGSVG 485
>gi|254701691|ref|ZP_05163519.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 5 str. 513]
gi|261752242|ref|ZP_05995951.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 5 str. 513]
gi|261741995|gb|EEY29921.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 5 str. 513]
Length = 507
Score = 590 bits (1522), Expect = e-166, Method: Composition-based stats.
Identities = 399/507 (78%), Positives = 448/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PY E+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYFEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|154244042|ref|YP_001415000.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
gi|154158127|gb|ABS65343.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
Length = 494
Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats.
Identities = 383/494 (77%), Positives = 436/494 (88%), Gaps = 5/494 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV++TV++VR IDVDQYKYGFET I+ +KAPKGL+E++IR+ISAKK EP+WML+WRL
Sbjct: 1 MAAVQDTVEQVRSIDVDQYKYGFETLIESEKAPKGLSEEVIRYISAKKEEPEWMLQWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM +P WAR+ YP ID+ DLYYY+ PK P+SLD+VDPE+L+TY KLGIP+R
Sbjct: 61 AYARWLTMPEPEWARVDYPTIDYQDLYYYSQPKQFKAPKSLDEVDPEILKTYAKLGIPLR 120
Query: 121 EQEILAGVQ-----TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
EQEILAGV+ K+AVDAVFDSVSV TTFKEELK +GVIFMPISEA+ EHPD+VK+
Sbjct: 121 EQEILAGVEIPEGERPKIAVDAVFDSVSVATTFKEELKAAGVIFMPISEALREHPDMVKQ 180
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVP DN++A LN AVF+DGSFVYIP GVRCPMELSTYFRINEK TGQFERTLIIA
Sbjct: 181 YLGSVVPPTDNYFATLNQAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIA 240
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD+ GKGGIYNFV
Sbjct: 241 DKGSYVSYLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDADGKGGIYNFV 300
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRGE S GEFYSIAISNG QQ+DSGTKM
Sbjct: 301 TKRGDCRGKNSKISWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAISNGRQQVDSGTKM 360
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNTTSRI+SKGISAG SNNTYRG VS HR AA +RNFT CDSLLIG+NCGAHT+PY
Sbjct: 361 IHLGKNTTSRIISKGISAGRSNNTYRGLVSAHRKAAGARNFTNCDSLLIGDNCGAHTVPY 420
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE+KN + EHEATTSKIS++ LFYC+QRG+ +E A+AL+VNGFVR+VLQ+LPMEFAVE
Sbjct: 421 IEAKNPTAQFEHEATTSKISEDMLFYCMQRGLTQEDAVALVVNGFVRDVLQQLPMEFAVE 480
Query: 476 AQKLIDISLEGSVG 489
AQKLI ISLEGSVG
Sbjct: 481 AQKLISISLEGSVG 494
>gi|209963828|ref|YP_002296743.1| cysteine desulfurase activator complex subunit SufB [Rhodospirillum
centenum SW]
gi|209957294|gb|ACI97930.1| FeS assembly protein SufB [Rhodospirillum centenum SW]
Length = 493
Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats.
Identities = 359/493 (72%), Positives = 418/493 (84%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +T+++VR + +YKYGF T+I+ + APKGLNEDI+RFISAKK EP+W+LEWRL
Sbjct: 1 MAATDQTLEQVRNLTETKYKYGFFTDIESEMAPKGLNEDIVRFISAKKQEPEWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WLTM +P WA ++YP IDF D YYYAAPK P+SLD+VDPELLRTYEKLGIP+R
Sbjct: 61 AYRHWLTMTEPDWAMLKYPPIDFQDSYYYAAPKVTEKPKSLDEVDPELLRTYEKLGIPLR 120
Query: 121 EQEILAGVQTSK----VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
EQEILAGV+ + VAVDAVFDSVSV TTFK++L++ G+IF ISEAI HP+LV++Y
Sbjct: 121 EQEILAGVEGAGDVPAVAVDAVFDSVSVATTFKKKLEEKGIIFCSISEAIQTHPELVRQY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DNFYA LNSAVFTDGSFVYIPKGVRCPMELSTYFRIN K TGQFERTLIIAD
Sbjct: 181 LGSVVPYSDNFYATLNSAVFTDGSFVYIPKGVRCPMELSTYFRINAKNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EGSYVSYLEGCTAPQRDENQLHAAVVEL+ALD+A+IKYSTVQNWYPGD GKGGIYNFVT
Sbjct: 241 EGSYVSYLEGCTAPQRDENQLHAAVVELIALDDAQIKYSTVQNWYPGDENGKGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRG CRG SKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+AI+N QQ D+GTKM+
Sbjct: 301 KRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSVAITNNMQQADTGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ KNT S IVSKGISAG + NTYRG V + A +RN+TQCDSLLIG+ CGAHT+PYI
Sbjct: 361 HIGKNTRSTIVSKGISAGRAQNTYRGLVKILPKADGARNYTQCDSLLIGDRCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E++N S +EHEATT+KIS++ LFYC RG+ EE A+ LIVNGF +EVL++LPMEFAVEA
Sbjct: 421 ENRNRSARVEHEATTAKISEDQLFYCRSRGLAEEDAVGLIVNGFCKEVLKELPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKL+ ISLEGSVG
Sbjct: 481 QKLVAISLEGSVG 493
>gi|209545422|ref|YP_002277651.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533099|gb|ACI53036.1| FeS assembly protein SufB [Gluconacetobacter diazotrophicus PAl 5]
Length = 496
Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats.
Identities = 345/496 (69%), Positives = 413/496 (83%), Gaps = 7/496 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET D V + YK+GFET I++D APKGL ED IR IS +K EP+W+LEWRL
Sbjct: 1 MPAVAETRDTVEGLGQSTYKWGFETEIEMDLAPKGLTEDTIRLISHRKQEPEWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++ W M +P+WA++ +P IDF D +YYAAPK GP+SLD+VDPELLRTYEKLGIP+
Sbjct: 61 AFQAWQAMPEPTWAKVSHPPIDFQDAHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLH 120
Query: 121 EQEILAGVQTSK-------VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
EQ +LAGV+ + VAVDAVFDSVSVVTTF+E L K+GVIF PISEA+ EHPDLV
Sbjct: 121 EQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLAKAGVIFCPISEAVREHPDLV 180
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++YL +VVPV DNFYAALNSAVFTDGSFVY+P+GVRCPMELSTYFRIN + TGQFERTLI
Sbjct: 181 RRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFERTLI 240
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ ++G+ VSYLEGCTAP RDENQLHAAVVELVA+D+A IKYSTVQNWYPGD G+GGIYN
Sbjct: 241 VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGGIYN 300
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG CRG RSKISWTQ+ETGSAITWKYPSC+L+G+ + GEFYS+A++N QQ D+GT
Sbjct: 301 FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQADTGT 360
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ +NT S I++K ISAG S++TYRG V + A+ SRNFTQCDSLLIG+ CGAHT+
Sbjct: 361 KMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGSRNFTQCDSLLIGDQCGAHTV 420
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIES+N S +EHEATTSKIS++ LFYC QRG+ EE A+ LIVNGF ++VL++LPMEFA
Sbjct: 421 PYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA 480
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLEGSVG
Sbjct: 481 VEAQKLLQISLEGSVG 496
>gi|254704235|ref|ZP_05166063.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 3 str. 686]
gi|261754901|ref|ZP_05998610.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 3 str. 686]
gi|261744654|gb|EEY32580.1| cysteine desulfurase activator complex subunit SufB [Brucella suis
bv. 3 str. 686]
Length = 507
Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats.
Identities = 398/507 (78%), Positives = 448/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+++VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETINQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVV TFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVATFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|330994035|ref|ZP_08317965.1| UPF0051 protein [Gluconacetobacter sp. SXCC-1]
gi|329758981|gb|EGG75495.1| UPF0051 protein [Gluconacetobacter sp. SXCC-1]
Length = 496
Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats.
Identities = 345/496 (69%), Positives = 419/496 (84%), Gaps = 7/496 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET V + + YK+GFET+I++D APKGLNE+ IR ISA+KNEP+WMLEWRL
Sbjct: 1 MPAVAETRKTVETLGQNTYKWGFETDIEMDIAPKGLNEETIRLISARKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WL M++P+WA++ YP ID+ D++YYAAP+ GP+SLD+VDPELLRTYEKLGIP+
Sbjct: 61 AYRSWLEMREPTWAKVSYPPIDYQDVHYYAAPRKKPGPKSLDEVDPELLRTYEKLGIPLH 120
Query: 121 EQEILAGVQTSK-------VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
EQ +LAGV+ + VAVDAVFDSVSV TTF++ L+++GVIF PISEA+ EHP+LV
Sbjct: 121 EQAMLAGVEVPEGQEARPPVAVDAVFDSVSVATTFRKTLQEAGVIFCPISEAVQEHPELV 180
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
KYL +VVPV DNFYAALN+AVFTDGSFV++PKGVRCPMELSTYFRIN + TGQFERTLI
Sbjct: 181 CKYLGSVVPVTDNFYAALNAAVFTDGSFVFVPKGVRCPMELSTYFRINARNTGQFERTLI 240
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ ++G+ VSYLEGCTAP RDENQLHAAVVELVA+++A IKYSTVQNWYPGD G+GGIYN
Sbjct: 241 VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDENGRGGIYN 300
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG CRG RSKISWTQ+ETGSAITWKYPSC+L+GE S GEFYS+A++N QQ D+GT
Sbjct: 301 FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGEGSVGEFYSVAVTNNHQQADTGT 360
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ +NT S I++K ISAG S++TYRG V + A+ +RNFTQCDSLLIG+ CGAHT+
Sbjct: 361 KMIHIGRNTRSTIIAKTISAGQSDSTYRGLVRMMPRASGARNFTQCDSLLIGDRCGAHTV 420
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIES+N S +EHEATTSKIS++ LFYC QRG+ EE A+ LIVNGF ++VL++LPMEFA
Sbjct: 421 PYIESRNMSARVEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA 480
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLEGSVG
Sbjct: 481 VEAQKLLQISLEGSVG 496
>gi|254469234|ref|ZP_05082639.1| FeS assembly protein SufB [Pseudovibrio sp. JE062]
gi|211961069|gb|EEA96264.1| FeS assembly protein SufB [Pseudovibrio sp. JE062]
Length = 490
Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats.
Identities = 389/490 (79%), Positives = 438/490 (89%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+V+ IDVDQYKYGF T+I+ + APKGLNEDII FISAKK EP+WML WRL
Sbjct: 1 MAAVQETIDQVKAIDVDQYKYGFVTDIESELAPKGLNEDIIAFISAKKEEPEWMLNWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRW TM++P+WAR+ YP IDF+DL+YYAAPK+ GP+SLD+VDPELL TY+KLGIP+
Sbjct: 61 AFRRWKTMEEPTWARVEYPKIDFEDLHYYAAPKNTEGPKSLDEVDPELLETYKKLGIPLS 120
Query: 121 EQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQEILAGV VAVDAVFDSVSV TTFKEEL K+GVIF PISEA+ EHP+LV+KYL +
Sbjct: 121 EQEILAGVAPENRVAVDAVFDSVSVATTFKEELAKAGVIFCPISEAVREHPELVQKYLGS 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRINEK TGQFERTLIIAD+GS
Sbjct: 181 VVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINEKNTGQFERTLIIADKGS 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVELVAL++AEIKYSTVQNWYPGDS+GKGGIYNFVTKRG
Sbjct: 241 YVSYLEGCTAPQRDENQLHAAVVELVALEDAEIKYSTVQNWYPGDSEGKGGIYNFVTKRG 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCR SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG QQIDSGTKM+HL
Sbjct: 301 DCREKNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGHQQIDSGTKMIHLG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRI+SKGISAG S NTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIESK
Sbjct: 361 KNTASRIISKGISAGVSQNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIESK 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NSS EHEATTSKISD+ +FYC RG+ EE A+ALIVNGFVR+V+Q+LPMEFAVEAQKL
Sbjct: 421 NSSAVFEHEATTSKISDDQMFYCQARGLDEEEAVALIVNGFVRDVIQQLPMEFAVEAQKL 480
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 481 ISISLEGSVG 490
>gi|258542738|ref|YP_003188171.1| cysteine desulfurase activator complex subunit SufB [Acetobacter
pasteurianus IFO 3283-01]
gi|256633816|dbj|BAH99791.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-01]
gi|256636875|dbj|BAI02844.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-03]
gi|256639928|dbj|BAI05890.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-07]
gi|256642984|dbj|BAI08939.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-22]
gi|256646039|dbj|BAI11987.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-26]
gi|256649092|dbj|BAI15033.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-32]
gi|256652079|dbj|BAI18013.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655136|dbj|BAI21063.1| ABC transporter FeS assembly protein SufB [Acetobacter pasteurianus
IFO 3283-12]
Length = 496
Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats.
Identities = 349/496 (70%), Positives = 424/496 (85%), Gaps = 7/496 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET + V K+ YK+GFET+IQ+D APKGLNEDI+R ISA+KNEP+W+LEWRL
Sbjct: 1 MPAVTETREAVEKLGQSTYKWGFETDIQMDLAPKGLNEDIVRLISARKNEPEWLLEWRLT 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R+W +MK+P+WA++ YP ID+ D +YYAAP+ GP+SLD+VDPELL+TYEKLGIP+
Sbjct: 61 AFRKWQSMKEPTWAKVSYPPIDYQDAHYYAAPRKKEGPKSLDEVDPELLKTYEKLGIPLH 120
Query: 121 EQEILAGVQ-------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
EQ +LAGV+ VAVDAVFDSVSVVTTF++ L+++GVIF PISEA+ EHP+LV
Sbjct: 121 EQALLAGVELPEGETARPPVAVDAVFDSVSVVTTFRKTLEEAGVIFCPISEAVQEHPELV 180
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+KYL +VVPV DNFYAALNSAVFTDGSFVY+PKGVRCPMELSTYFRIN + TGQFERTLI
Sbjct: 181 RKYLGSVVPVADNFYAALNSAVFTDGSFVYVPKGVRCPMELSTYFRINARNTGQFERTLI 240
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ ++G+ VSYLEGCTAP RDENQLHAAVVELVA+++A IKYSTVQNWYPGDS+G+GGIYN
Sbjct: 241 VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDSEGRGGIYN 300
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG CRG RSKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N QQ D+GT
Sbjct: 301 FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGSVGEFYSVAVTNNCQQADTGT 360
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ +NT S I++K ISAG S++TYRG V V A+ +RNFTQCDSLLIG+ CGAHT+
Sbjct: 361 KMIHIGRNTRSTIIAKTISAGRSDSTYRGLVRVQPKASGARNFTQCDSLLIGDECGAHTV 420
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIES+N + +EHEATTSKIS++ LFYC QRG+ EE A+ LIVNGF R+VL++LPMEFA
Sbjct: 421 PYIESRNMAARIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCRDVLKELPMEFA 480
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLEGSVG
Sbjct: 481 VEAQKLLQISLEGSVG 496
>gi|294852285|ref|ZP_06792958.1| FeS assembly protein SufB [Brucella sp. NVSL 07-0026]
gi|294820874|gb|EFG37873.1| FeS assembly protein SufB [Brucella sp. NVSL 07-0026]
Length = 507
Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats.
Identities = 398/507 (78%), Positives = 447/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++V PV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVAPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGI EE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGILEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|114704652|ref|ZP_01437560.1| hypothetical protein FP2506_06946 [Fulvimarina pelagi HTCC2506]
gi|114539437|gb|EAU42557.1| hypothetical protein FP2506_06946 [Fulvimarina pelagi HTCC2506]
Length = 510
Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats.
Identities = 388/510 (76%), Positives = 445/510 (87%), Gaps = 21/510 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D VRKIDVDQYKYGFET I++D APKGL+E+II+ ISAKK EP WML+WRL
Sbjct: 1 MPAVQETIDSVRKIDVDQYKYGFETLIEMDVAPKGLDEEIIKLISAKKGEPQWMLDWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ RW TM+ P WAR+ YP IDF D++YYAAPKS+ GP SLD+VDPE+LRTYEKLGIP++
Sbjct: 61 AFERWKTMESPDWARLDYPPIDFQDIHYYAAPKSMSGPASLDEVDPEILRTYEKLGIPLK 120
Query: 121 EQEILAGVQT---------------------SKVAVDAVFDSVSVVTTFKEELKKSGVIF 159
EQE+LAGV+ ++VAVDAVFDSVSV TTFK+EL+K+GVIF
Sbjct: 121 EQEVLAGVRKMDEPSEFDEDSGTPPAGQNGQTRVAVDAVFDSVSVATTFKKELEKAGVIF 180
Query: 160 MPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
MPISEAI EHP+LV+KYL +VVP+ DNF+A +NSAVFTDGSFVY+PKGVRCPMELSTYFR
Sbjct: 181 MPISEAIREHPELVQKYLGSVVPISDNFFATMNSAVFTDGSFVYVPKGVRCPMELSTYFR 240
Query: 220 INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
INE+ TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL+ AEIKYSTVQN
Sbjct: 241 INERNTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALEGAEIKYSTVQN 300
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
WYPGD +GKGGIYNFVTKRGDCRG S+ISWTQ+ETGSAITWKYPSC+LRG+ + GEFYS
Sbjct: 301 WYPGDKEGKGGIYNFVTKRGDCRGDNSRISWTQVETGSAITWKYPSCILRGDNARGEFYS 360
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
IA+SNG QQIDSGTKM+HL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQC
Sbjct: 361 IAVSNGRQQIDSGTKMIHLGKNTSSRIISKGISAGHSNNTYRGQVSAHRKAKNARNFTQC 420
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
DSLLIG CGAHT+PYIESKN++ EHEATTSKISD+ LFYC+QRGIPEE A+ALIVNG
Sbjct: 421 DSLLIGEECGAHTVPYIESKNATAQFEHEATTSKISDDQLFYCMQRGIPEEEAVALIVNG 480
Query: 460 FVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
FV++V+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 FVKDVIQQLPMEFAVEAQKLIGISLEGSVG 510
>gi|148559230|ref|YP_001258904.1| cysteine desulfurase activator complex subunit SufB [Brucella ovis
ATCC 25840]
gi|148370487|gb|ABQ60466.1| FeS assembly protein SufB [Brucella ovis ATCC 25840]
Length = 507
Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats.
Identities = 398/507 (78%), Positives = 447/507 (88%), Gaps = 18/507 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WML WRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLGWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPEL +TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNRSGPKSLDEVDPELFKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVLDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 EVIQELPMEFAVEAQKLIGISLEGSVG 507
>gi|162148830|ref|YP_001603291.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter diazotrophicus PAl 5]
gi|161787407|emb|CAP57002.1| FeS assembly protein SufB [Gluconacetobacter diazotrophicus PAl 5]
Length = 496
Score = 588 bits (1515), Expect = e-166, Method: Composition-based stats.
Identities = 344/496 (69%), Positives = 412/496 (83%), Gaps = 7/496 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET D V + YK+GFET I++D APKGL ED IR IS +K EP+W+LEWRL
Sbjct: 1 MPAVAETRDTVEGLGQSTYKWGFETEIEMDLAPKGLTEDTIRLISHRKQEPEWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++ W M +P+WA++ +P IDF D +YYAAPK GP+SLD+VDPELLRTYEKLGIP+
Sbjct: 61 AFQAWQAMPEPTWAKVSHPPIDFQDAHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLH 120
Query: 121 EQEILAGVQTSK-------VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
EQ +LAGV+ + VAVDAVFDSVSVVTTF+E L K+GVIF PISEA+ EHPDLV
Sbjct: 121 EQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLAKAGVIFCPISEAVREHPDLV 180
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++YL +VVPV DNFYAALNSAVFTDGSFVY+P+GVRCPMELSTYFRIN + TGQFERTLI
Sbjct: 181 RRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFERTLI 240
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ ++G+ VSYLEGCTAP RDENQLHAAVVELVA+D+A IKYSTVQNWYPGD G+GGIYN
Sbjct: 241 VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGGIYN 300
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG CRG RSKISWTQ+ETGSAITWKYPSC+L+G+ + GEFYS+A++N QQ D+GT
Sbjct: 301 FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQADTGT 360
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ +NT S I++K ISAG S++TYRG V + A+ RNFTQCDSLLIG+ CGAHT+
Sbjct: 361 KMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGGRNFTQCDSLLIGDQCGAHTV 420
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIES+N S +EHEATTSKIS++ LFYC QRG+ EE A+ LIVNGF ++VL++LPMEFA
Sbjct: 421 PYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA 480
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLEGSVG
Sbjct: 481 VEAQKLLQISLEGSVG 496
>gi|328543981|ref|YP_004304090.1| ABC transporter involved in Fe-S cluster assembly, permease
[polymorphum gilvum SL003B-26A1]
gi|326413725|gb|ADZ70788.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Polymorphum gilvum SL003B-26A1]
Length = 490
Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats.
Identities = 380/490 (77%), Positives = 439/490 (89%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+V+ IDVDQYKYGF T+I+ ++ KGL+++ +RF+SAKKNEP+WM EWRL
Sbjct: 1 MPAVQETIDRVKAIDVDQYKYGFVTDIESERGAKGLSDETVRFLSAKKNEPEWMTEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A RR+ M +P+WAR+ YP IDFDDLYYYAAPKS+ GP+S+D+VDPELL TYEKLGIP+R
Sbjct: 61 ALRRFKAMDEPTWARVSYPKIDFDDLYYYAAPKSVEGPKSIDEVDPELLATYEKLGIPLR 120
Query: 121 EQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQEILAG+ VAVDAVFDSVSVVTTFKEELKK+GVIF ISEA+ E+PDLVKKYL +
Sbjct: 121 EQEILAGIAPQNRVAVDAVFDSVSVVTTFKEELKKAGVIFCSISEAVREYPDLVKKYLGS 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+YA LNSAVF+DGSFVY+P+GVRCPMELSTYFRINE+ TGQFERTLIIAD+G+
Sbjct: 181 VVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEQKTGQFERTLIIADKGA 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVEL+ALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 241 YVSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRG 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL
Sbjct: 301 DCRGRNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMIHLG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT+SRI+SKGI+AG S NTYRG VS HR A ++RNFTQCDSLLIG +CGAHT+PYIESK
Sbjct: 361 KNTSSRIISKGIAAGKSENTYRGLVSAHRKATNARNFTQCDSLLIGQDCGAHTVPYIESK 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ EHEATTSKISD+ +FYCLQRG+ EE A+ALIVNGFV++V+Q+LPMEFAVEAQKL
Sbjct: 421 NATAVFEHEATTSKISDDQMFYCLQRGLSEEEAVALIVNGFVKDVIQQLPMEFAVEAQKL 480
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 481 ISISLEGSVG 490
>gi|118589097|ref|ZP_01546504.1| component of SufBCD complex [Stappia aggregata IAM 12614]
gi|118438426|gb|EAV45060.1| component of SufBCD complex [Stappia aggregata IAM 12614]
Length = 490
Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats.
Identities = 382/490 (77%), Positives = 442/490 (90%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+DKV+ IDVDQYKYGF T+I+ D+ KGL+E+ +RF+SAKKNEP+WM EWRL
Sbjct: 1 MPAVQETIDKVKAIDVDQYKYGFVTDIESDRGAKGLSEETVRFLSAKKNEPEWMTEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A RR+ M++P+WAR+ YP ID DDLYY+A+PKS+ GP+SLD+VDPELL TYEKLGIP+R
Sbjct: 61 ALRRFRQMEEPTWARVSYPKIDLDDLYYWASPKSVEGPKSLDEVDPELLATYEKLGIPLR 120
Query: 121 EQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQEILAGV+ VAVDAVFDSVSVVTTFKEELKK+GVIF ISEA+ E+PDLVKKYL +
Sbjct: 121 EQEILAGVEPKNRVAVDAVFDSVSVVTTFKEELKKAGVIFCSISEALREYPDLVKKYLGS 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+YA LNSAVF+DGSFVY+P+GVRCPMELSTYFRINE+ TGQFERTLIIA++G+
Sbjct: 181 VVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEQNTGQFERTLIIAEKGA 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNW+PGD GKGGIYNFVTKRG
Sbjct: 241 YVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWFPGDKNGKGGIYNFVTKRG 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SKISWTQ+ETGSAITWKYPSC+LRGE S GEFYSIA+SNG+QQ+DSGTKM+HL
Sbjct: 301 DCRGKNSKISWTQVETGSAITWKYPSCILRGENSRGEFYSIAVSNGYQQVDSGTKMIHLG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KN++SRI+SKGISAG S NTYRG VS HR A+++RNFTQCDSLLIG +CGAHT+PYIESK
Sbjct: 361 KNSSSRIISKGISAGKSQNTYRGLVSAHRKASNARNFTQCDSLLIGQDCGAHTVPYIESK 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKISD+ +FYCLQRG+ EE A+ALIVNGFV++V+Q+LPMEFAVEAQKL
Sbjct: 421 NASAQFEHEATTSKISDDQMFYCLQRGLSEEEAVALIVNGFVKDVIQQLPMEFAVEAQKL 480
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 481 ISISLEGSVG 490
>gi|158422668|ref|YP_001523960.1| FeS assembly SufB protein [Azorhizobium caulinodans ORS 571]
gi|158329557|dbj|BAF87042.1| FeS assembly SufB protein [Azorhizobium caulinodans ORS 571]
Length = 493
Score = 587 bits (1512), Expect = e-165, Method: Composition-based stats.
Identities = 382/493 (77%), Positives = 440/493 (89%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR+IDV+QYKYGF T+++ +KAPKGL+ED+IRFISAKKNEP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRQIDVEQYKYGFVTDVESEKAPKGLSEDVIRFISAKKNEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P WA++ +P IDF DLYYYAAPK SLD+VDPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMREPEWAKVNFPKIDFQDLYYYAAPKKKKALSSLDEVDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
EQE+LAGV+ K+AVDAVFDSVSV TTF++ELK++GVIFMPISEA+ EHP+LV+KY
Sbjct: 121 EQELLAGVERPEGERKIAVDAVFDSVSVATTFQKELKEAGVIFMPISEALKEHPELVRKY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVPV DN+YA LNSAVF+DGSFVY+P+GVRCPMELSTYFRINEK TGQFERTLIIAD
Sbjct: 181 LGTVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+YVSYLEGCTAPQRDENQLHAAVVELV LD+AEIKYSTVQNWYPGD GKGGIYNFVT
Sbjct: 241 KGAYVSYLEGCTAPQRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGKGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG QQ+DSGTKM+
Sbjct: 301 KRGDCRGANSKISWTQVETGSAITWKYPSCVLRGDGSQGEFYSIAISNGHQQVDSGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNT+SRIVSKGISAG S NTYRG VS HR A +RNFT CDSLLIG+ CGAHT+PYI
Sbjct: 361 HLGKNTSSRIVSKGISAGQSQNTYRGLVSAHRKAKGARNFTACDSLLIGDQCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KN + EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV+EVLQ+LPMEFAVEA
Sbjct: 421 EAKNPTTVFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKEVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|329114663|ref|ZP_08243422.1| FeS assembly protein SufB [Acetobacter pomorum DM001]
gi|326696143|gb|EGE47825.1| FeS assembly protein SufB [Acetobacter pomorum DM001]
Length = 496
Score = 587 bits (1512), Expect = e-165, Method: Composition-based stats.
Identities = 349/496 (70%), Positives = 424/496 (85%), Gaps = 7/496 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET + V K+ YK+GFET+IQ+D APKGLNEDI+R ISA+KNEP+W+LEWRL
Sbjct: 1 MPAVTETREAVEKLGQSTYKWGFETDIQMDLAPKGLNEDIVRLISARKNEPEWLLEWRLT 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R+W +MK+P+WA++ YP ID+ D +YYAAP+ GP+SLD+VDPELLRTYEKLGIP+
Sbjct: 61 AFRKWQSMKEPTWAKVSYPPIDYQDAHYYAAPRKKEGPKSLDEVDPELLRTYEKLGIPLH 120
Query: 121 EQEILAGVQ-------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
EQ +LAGV+ VAVDAVFDSVSVVTTF++ L+++GVIF PISEA+ EHP+LV
Sbjct: 121 EQAMLAGVELPEGETARPPVAVDAVFDSVSVVTTFRKTLEEAGVIFCPISEAVQEHPELV 180
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+KYL +VVPV DNFYAALNSAVFTDGSFVY+PKGVRCPMELSTYFRIN + TGQFERTLI
Sbjct: 181 RKYLGSVVPVADNFYAALNSAVFTDGSFVYVPKGVRCPMELSTYFRINARNTGQFERTLI 240
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ ++G+ VSYLEGCTAP RDENQLHAAVVELVA++++ IKYSTVQNWYPGDS+G+GGIYN
Sbjct: 241 VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMEDSSIKYSTVQNWYPGDSEGRGGIYN 300
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG CRG RSKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N QQ D+GT
Sbjct: 301 FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGSVGEFYSVAVTNNCQQADTGT 360
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ +NT S I++K ISAG S++TYRG V V A+ +RNFTQCDSLLIG+ CGAHT+
Sbjct: 361 KMIHIGRNTRSTIIAKTISAGRSDSTYRGLVRVQPKASGARNFTQCDSLLIGDECGAHTV 420
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIES+N + +EHEATTSKIS++ LFYC QRG+ EE A+ LIVNGF R+VL++LPMEFA
Sbjct: 421 PYIESRNMAARIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCRDVLKELPMEFA 480
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLEGSVG
Sbjct: 481 VEAQKLLQISLEGSVG 496
>gi|58038585|ref|YP_190549.1| cysteine desulfurase activator complex subunit SufB [Gluconobacter
oxydans 621H]
gi|58000999|gb|AAW59893.1| ABC transporter subunit [Gluconobacter oxydans 621H]
Length = 493
Score = 587 bits (1512), Expect = e-165, Method: Composition-based stats.
Identities = 343/493 (69%), Positives = 414/493 (83%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET + V K+ Y++GFET+I++D APKGLNE+ +R IS +K EP WML+WRL
Sbjct: 1 MPAVTETRETVEKLAKSSYEWGFETDIEMDIAPKGLNEETVRLISERKGEPQWMLDWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R WL M++P+WA I +P ID+ D +Y+A PK GP+SLD+VDPELL+TY KLGIP+
Sbjct: 61 AFRAWLEMEEPTWAHIHHPPIDYQDAHYFAQPKKKPGPKSLDEVDPELLKTYAKLGIPLH 120
Query: 121 EQEILAGVQTSK----VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
EQ +LAGV+ ++ VAVDAVFDSVSV TTF++ L ++GVIF PIS+AI EHP+LV+KY
Sbjct: 121 EQALLAGVEGAEERLPVAVDAVFDSVSVATTFRKTLAEAGVIFCPISDAIREHPELVQKY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVPV DNF+AALNSAVFTDGSFVYIP+GVRCPMELSTYFRIN + TGQFERTLIIA+
Sbjct: 181 LGTVVPVADNFFAALNSAVFTDGSFVYIPEGVRCPMELSTYFRINARNTGQFERTLIIAE 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ + VSYLEGCTAPQRDENQLHAAVVELVA+++A IKYSTVQNWYPGD +G+GGIYNFVT
Sbjct: 241 DRATVSYLEGCTAPQRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDDEGRGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRG CRG RSKISWTQ+ETGSAITWKYPSC+L GE S GEFYS+A++N QQ D+GTKM+
Sbjct: 301 KRGICRGARSKISWTQVETGSAITWKYPSCVLAGEGSVGEFYSVAVTNNHQQADTGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HLA NT S I++K ISAG S++TYRG V + A ++RNFTQCDSLLIG+ CGAHT+PYI
Sbjct: 361 HLAPNTRSTIIAKTISAGHSDSTYRGLVRMQPKARNARNFTQCDSLLIGDQCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
ES+N + +EHEATTSKIS++ LFYC RG+ EE A+ LIVNGF REVL++LPMEFAVEA
Sbjct: 421 ESRNMTARVEHEATTSKISEDQLFYCRSRGLSEEDAVGLIVNGFCREVLKELPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKL+ ISLEGSVG
Sbjct: 481 QKLLQISLEGSVG 493
>gi|298291334|ref|YP_003693273.1| FeS assembly protein SufB [Starkeya novella DSM 506]
gi|296927845|gb|ADH88654.1| FeS assembly protein SufB [Starkeya novella DSM 506]
Length = 491
Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats.
Identities = 379/491 (77%), Positives = 438/491 (89%), Gaps = 2/491 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR IDVDQYKYGF T I+ +KAPKGL ED IRFISAKK+EP+WMLEWRL
Sbjct: 1 MPAVQETVDQVRSIDVDQYKYGFFTEIESEKAPKGLTEDTIRFISAKKDEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRW TM++P WAR+ YP I + +LYYY+APK GP+S+DD+DPE+L TYEKLGIP+R
Sbjct: 61 AFRRWQTMREPEWARVSYPPIAYQELYYYSAPKRKEGPKSIDDIDPEILATYEKLGIPLR 120
Query: 121 EQEILAGVQ--TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E++ L G++ ++VAVDAVFDSVSV TTFKEEL K+GVIFMPISEAI E+P++V+KYL
Sbjct: 121 ERDALLGIESGGARVAVDAVFDSVSVATTFKEELAKAGVIFMPISEAIREYPEVVRKYLG 180
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+VVPV DNF+A LNSAVF+DGSFVY+PKGVRCPMELSTYFRINE+ TGQFERTLIIADEG
Sbjct: 181 SVVPVTDNFFATLNSAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEG 240
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+YVSYLEGCTAP RDENQLHAAVVELVAL +AEIKYSTVQNWYPGDSQGKGGI+NFVTKR
Sbjct: 241 AYVSYLEGCTAPMRDENQLHAAVVELVALADAEIKYSTVQNWYPGDSQGKGGIFNFVTKR 300
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
GDCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG QQ+DSGTKM+HL
Sbjct: 301 GDCRGDRSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGRQQVDSGTKMIHL 360
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT+SRI+SKGI+AG S+NTYRG VS HR A ++RNFT CDSLLIG+ CGAHT+PYIES
Sbjct: 361 GKNTSSRIISKGIAAGHSDNTYRGLVSAHRKATNARNFTNCDSLLIGDKCGAHTVPYIES 420
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
KNS+ + EHEATTSKIS++ LFYC QRG+ E A ALIVNGFV++VLQ+LPMEFAVEAQK
Sbjct: 421 KNSTAHFEHEATTSKISEDQLFYCRQRGLDPEEATALIVNGFVKDVLQQLPMEFAVEAQK 480
Query: 479 LIDISLEGSVG 489
LI +SLEGSVG
Sbjct: 481 LIAVSLEGSVG 491
>gi|296116551|ref|ZP_06835161.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter hansenii ATCC 23769]
gi|295976763|gb|EFG83531.1| cysteine desulfurase activator complex subunit SufB
[Gluconacetobacter hansenii ATCC 23769]
Length = 496
Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats.
Identities = 343/496 (69%), Positives = 417/496 (84%), Gaps = 7/496 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET V + + YK+GFET+I++D APKGLNEDIIR IS +KNEP+WML+WRL
Sbjct: 1 MPAVAETRKTVETLGQNTYKWGFETDIEMDIAPKGLNEDIIRLISTRKNEPEWMLDWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY WL M +P+WA++ +P ID+ D++YYAAPK GP+SLD+VDPELLRTYEKLGIP+
Sbjct: 61 AYHAWLQMSEPTWAKVSHPPIDYQDVHYYAAPKKKPGPKSLDEVDPELLRTYEKLGIPLH 120
Query: 121 EQEILAGVQTSK-------VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
EQ +LAGV+ + +AVDAVFDSVSV TTF++ L ++GVIF PISEA+ EHPDLV
Sbjct: 121 EQALLAGVEVPEGEEARPPIAVDAVFDSVSVATTFRKTLSEAGVIFCPISEAVQEHPDLV 180
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+KYL +VVPV DNFYAALN+AVFTDGSFV++PKGVRCPMELSTYFRIN + TGQFERTLI
Sbjct: 181 RKYLGSVVPVTDNFYAALNAAVFTDGSFVFVPKGVRCPMELSTYFRINARNTGQFERTLI 240
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ ++G+ VSYLEGCTAP RDENQLHAAVVELVA+++A IKYSTVQNWYPGD G+GGIYN
Sbjct: 241 VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDENGRGGIYN 300
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG CRG RSKISWTQ+ETGSAITWKYPSC+L+GE S GEFYS+A++N QQ D+GT
Sbjct: 301 FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGEGSVGEFYSVAVTNNHQQADTGT 360
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ +NT S I++K ISAG S++TYRG V + A+ RNFTQCDSLLIG+ CGAHT+
Sbjct: 361 KMIHIGRNTRSTIIAKTISAGQSDSTYRGLVRMMPKASGGRNFTQCDSLLIGDRCGAHTV 420
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIE++N S ++EHEATTSKIS++ LFYC QRG+ EE A+ LIVNGF ++VL++LPMEFA
Sbjct: 421 PYIENRNMSASIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA 480
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLEGSVG
Sbjct: 481 VEAQKLLQISLEGSVG 496
>gi|154248389|ref|YP_001419347.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
gi|154162474|gb|ABS69690.1| FeS assembly protein SufB [Xanthobacter autotrophicus Py2]
Length = 490
Score = 585 bits (1507), Expect = e-165, Method: Composition-based stats.
Identities = 382/492 (77%), Positives = 436/492 (88%), Gaps = 5/492 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETV++VR +DVDQYKYGF T+I+ +KAPKGL+ED IR+ISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETVERVRALDVDQYKYGFVTDIESEKAPKGLSEDTIRYISAKKNEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP IDF D YYY+APK+ P+S+D++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMVEPTWARVSYPQIDFQDYYYYSAPKA--APKSIDEIDPEILKTYEKLGIPLR 118
Query: 121 EQEILAGVQ---TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E++ L G++ SKVAVDAVFDSVSV TTFK EL +GVIFMPISEAI EHP+LVK YL
Sbjct: 119 ERDALLGIESSGGSKVAVDAVFDSVSVATTFKAELASAGVIFMPISEAIREHPELVKTYL 178
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+VVPV DNFYA LNSAVF+DGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLIIADE
Sbjct: 179 GSVVPVSDNFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADE 238
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+YVSYLEGCTAPQRDENQLHAAVVELVAL AEIKYSTVQNWYPGD GKGGIYNFVTK
Sbjct: 239 GAYVSYLEGCTAPQRDENQLHAAVVELVALKGAEIKYSTVQNWYPGDKDGKGGIYNFVTK 298
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
RGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG QQ+DSGTKM+H
Sbjct: 299 RGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGHQQVDSGTKMIH 358
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L KNT+SRI+SKGI+AG S NTYRG+VS HR A +RNFT CDSLLIG+ CGAHT+PY+E
Sbjct: 359 LGKNTSSRIISKGIAAGHSENTYRGQVSAHRKATGARNFTNCDSLLIGDQCGAHTVPYME 418
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+KN+S EHEATTSKIS++ LFYCLQRG+ E A+ALIVNGFVR+VLQ+LPMEFAVEAQ
Sbjct: 419 AKNASAQFEHEATTSKISEDQLFYCLQRGLGPEEAVALIVNGFVRDVLQQLPMEFAVEAQ 478
Query: 478 KLIDISLEGSVG 489
KLI +SLEGSVG
Sbjct: 479 KLIAVSLEGSVG 490
>gi|288961954|ref|YP_003452264.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
gi|288914234|dbj|BAI75720.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
Length = 494
Score = 585 bits (1507), Expect = e-165, Method: Composition-based stats.
Identities = 355/494 (71%), Positives = 418/494 (84%), Gaps = 5/494 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A ETV++VR + +YKYGF T+I+ D APKGLNEDI+RFISAKK EP+W+LEWRL
Sbjct: 1 MAAQPETVEQVRAVTEQKYKYGFTTDIEADVAPKGLNEDIVRFISAKKEEPEWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W TM++P WA + +P ID+ D +YYAAPK GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AFRVWQTMEEPEWAAVSFPPIDYQDAHYYAAPKKKAGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGVQTSK-----VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
EQEILAGV+ S+ +AVDAVFDSVSV TTFK +L++ G+IF ISEA+ +HPDLVKK
Sbjct: 121 EQEILAGVEGSEGKSPAIAVDAVFDSVSVATTFKAKLEEMGIIFCAISEAVQKHPDLVKK 180
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVP DN+YA LN AVFTDGSFVYIPKGVRCPMELSTYFRIN+ TGQFERTLIIA
Sbjct: 181 YLGSVVPYTDNYYATLNCAVFTDGSFVYIPKGVRCPMELSTYFRINQANTGQFERTLIIA 240
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DEG+YVSYLEGCTAP+RDENQLHAAVVELVA+D+A IKYSTVQNWYPG+ +G GGIYNFV
Sbjct: 241 DEGAYVSYLEGCTAPKRDENQLHAAVVELVAMDDATIKYSTVQNWYPGNEEGVGGIYNFV 300
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKRG CRG SKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+AI+N FQQ D+GTKM
Sbjct: 301 TKRGACRGRNSKISWTQVETGSAITWKYPSCILQGDNSVGEFYSVAITNNFQQADTGTKM 360
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+H+ KNT S IVSKGISAG + TYRG V + A +RN TQCDSLLIG+ CGAHT+PY
Sbjct: 361 IHIGKNTRSTIVSKGISAGKAQQTYRGLVKILPKAEGARNHTQCDSLLIGDQCGAHTVPY 420
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IES+N S +EHEATT+KIS++ LFYC QRGI EE A++LIVNGF +EVL++LPMEFAVE
Sbjct: 421 IESRNRSARIEHEATTAKISEDQLFYCRQRGISEEDAVSLIVNGFCKEVLKELPMEFAVE 480
Query: 476 AQKLIDISLEGSVG 489
AQKL+ ISLEGSVG
Sbjct: 481 AQKLVGISLEGSVG 494
>gi|307946846|ref|ZP_07662181.1| FeS assembly protein SufB [Roseibium sp. TrichSKD4]
gi|307770510|gb|EFO29736.1| FeS assembly protein SufB [Roseibium sp. TrichSKD4]
Length = 490
Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats.
Identities = 379/490 (77%), Positives = 436/490 (88%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+V+ IDVDQYKYGF T+I+ +K KGL+E+ +RF+SAKKNEP+WM EWRL
Sbjct: 1 MPAVQETIDQVKAIDVDQYKYGFVTDIESEKGAKGLSEETVRFLSAKKNEPEWMTEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A RR+ TM +P WAR+ YP ID ++LYY+AAPKS+ GP+SLD+VDPELL TY KLGIP+
Sbjct: 61 ALRRFQTMTEPDWARVEYPPIDLNELYYWAAPKSVEGPKSLDEVDPELLETYAKLGIPLA 120
Query: 121 EQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQEILAGV+ VAVDAVFDSVSVVTTFKEEL K GVIF ISEA+ EHP+LVKKYL +
Sbjct: 121 EQEILAGVEPKNRVAVDAVFDSVSVVTTFKEELAKVGVIFCSISEALREHPELVKKYLGS 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+YA LNSAVF+DGSFVYIP+GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 181 VVPVTDNYYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQNTGQFERTLIIADKGS 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNW+PGD GKGGIYNFVTKRG
Sbjct: 241 YVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWFPGDKDGKGGIYNFVTKRG 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL
Sbjct: 301 DCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQVDSGTKMIHLG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT+SRI+SKGISAG S NTYRG VS H+ A+++RNFTQCDSLLIG +CGAHT+PYIESK
Sbjct: 361 KNTSSRIISKGISAGKSQNTYRGLVSAHKKASNARNFTQCDSLLIGQDCGAHTVPYIESK 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKISD+ +FYCLQRG+ EE A+ALIVNGFV++V+Q+LPMEFAVE+QKL
Sbjct: 421 NASAQFEHEATTSKISDDQMFYCLQRGLSEEEAVALIVNGFVKDVIQQLPMEFAVESQKL 480
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 481 ISISLEGSVG 490
>gi|90424338|ref|YP_532708.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris BisB18]
gi|90106352|gb|ABD88389.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris BisB18]
Length = 493
Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats.
Identities = 374/493 (75%), Positives = 435/493 (88%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +ETV++VR++DVDQYKYGFET+I+ DKAPKGL+ED +RFISAKKNEPDWML+WRL
Sbjct: 1 MPAEQETVERVRRVDVDQYKYGFETDIESDKAPKGLSEDTVRFISAKKNEPDWMLQWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP ID+ DLYYY+APK S+D++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVDYPKIDYQDLYYYSAPKKKPQLSSIDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E E+L GV +VAVDAVFDSVSV TTF++ELK +GVIFMPISEAI EHPDLVKKY
Sbjct: 121 EVEVLEGVVRPEGERRVAVDAVFDSVSVATTFQKELKAAGVIFMPISEAIREHPDLVKKY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVP DN++A LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERTLIIAD
Sbjct: 181 LGTVVPTTDNYFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+YVSYLEGCTAPQRDENQLHAAVVEL+ D+AEIKYSTVQNWYPG+S+G GGIYNFVT
Sbjct: 241 QGAYVSYLEGCTAPQRDENQLHAAVVELITHDDAEIKYSTVQNWYPGNSEGIGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DSGTKM+
Sbjct: 301 KRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAISNGYQQVDSGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGAHT+PY+
Sbjct: 361 HLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDSLLIGDQCGAHTVPYV 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPMEFAVEA
Sbjct: 421 EAKNSSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKDVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|296536721|ref|ZP_06898781.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Roseomonas cervicalis ATCC 49957]
gi|296262952|gb|EFH09517.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Roseomonas cervicalis ATCC 49957]
Length = 499
Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats.
Identities = 353/499 (70%), Positives = 414/499 (82%), Gaps = 10/499 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET+D V+ + YKYGFET I ++ APKGLNEDI+RFISAKKNEP W+LEWRL
Sbjct: 1 MPAVTETIDAVQSVTQGTYKYGFETEIDMEFAPKGLNEDIVRFISAKKNEPAWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ W TM++P W + YP ID+ D YYYAAPK V P+SLD+VDPELLRTYEKLGIP++
Sbjct: 61 AFALWKTMEEPRWPAVSYPPIDYQDAYYYAAPKQTVKPKSLDEVDPELLRTYEKLGIPLK 120
Query: 121 EQEILAGVQTS----------KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
EQ ILAGV+ + VAVDAVFDSVSV T++K+ L K G++F ISEA+ EHP
Sbjct: 121 EQAILAGVEGAGDTPAEGGRMPVAVDAVFDSVSVATSYKDRLAKEGIVFCAISEAVQEHP 180
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LV++YL +VVP GDNF+AALNSAVFTDGSFVYIPKGV+CPMELSTYFRIN K TGQFER
Sbjct: 181 ELVRQYLGSVVPQGDNFFAALNSAVFTDGSFVYIPKGVKCPMELSTYFRINAKSTGQFER 240
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLIIA+EGS VSYLEGCTAP RDENQLHAAVVELVALD+A IKYSTVQNWYPGD GKGG
Sbjct: 241 TLIIAEEGSSVSYLEGCTAPMRDENQLHAAVVELVALDDASIKYSTVQNWYPGDENGKGG 300
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
IYNFVTKRG CRG RSKISWTQ+ETGS+ITWKYPSC+L+G++S GEFYS+AI+N QQ D
Sbjct: 301 IYNFVTKRGACRGKRSKISWTQVETGSSITWKYPSCILQGDESVGEFYSVAITNNRQQAD 360
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+GTKM H+ KNT S I+SKGISAGF NTYRG V + A+ +RNFTQCDSLLIG+ CGA
Sbjct: 361 TGTKMFHIGKNTRSTIISKGISAGFGQNTYRGLVKISPKASGARNFTQCDSLLIGDQCGA 420
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT+PYIE++ + +EHEATTS+I+++ LFYC QRG+ EE A+ LIVNGF REVL++LPM
Sbjct: 421 HTVPYIENRCMTAKVEHEATTSRIAEDQLFYCRQRGLSEEDAVGLIVNGFCREVLKELPM 480
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFAVEAQKL+ ISLEGSVG
Sbjct: 481 EFAVEAQKLLQISLEGSVG 499
>gi|83593905|ref|YP_427657.1| cysteine desulfurase activator complex subunit SufB [Rhodospirillum
rubrum ATCC 11170]
gi|83576819|gb|ABC23370.1| Iron-regulated ABC transporter membrane component SufB
[Rhodospirillum rubrum ATCC 11170]
Length = 484
Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats.
Identities = 353/489 (72%), Positives = 416/489 (85%), Gaps = 5/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
MVA + TVD VR+ + YKYGF T+I VD APKGLNEDI+R ISAKK EP+WMLEWRL
Sbjct: 1 MVATQNTVDTVRE-ATEAYKYGFVTDIAVDIAPKGLNEDIVRLISAKKGEPEWMLEWRLK 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R WLT+ +P WA++ YP ID+ D++YYAAPK GP+SLD+VDPELL TY KLGIP++
Sbjct: 60 AFRHWLTLTEPDWAKVSYPPIDYQDVHYYAAPKLSEGPKSLDEVDPELLETYAKLGIPLK 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQE+LAGV VAVDAVFDSVSV TT+K++L + GVIF ISEAI EHP+LV+KYL +V
Sbjct: 120 EQELLAGV----VAVDAVFDSVSVATTYKKKLGQMGVIFCSISEAIREHPELVRKYLGSV 175
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN++A LN AVFTDGSFVY+PKG+RCPMELSTYFRINE+ TGQFERTLI+ D+G+Y
Sbjct: 176 VPYSDNYFATLNCAVFTDGSFVYVPKGLRCPMELSTYFRINERNTGQFERTLIVCDDGAY 235
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVALD+A+IKYSTVQNWYPGD GKGGI+NFVTKRG
Sbjct: 236 VSYLEGCTAPQRDENQLHAAVVELVALDDAQIKYSTVQNWYPGDKNGKGGIFNFVTKRGA 295
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+AI+N QQ D+GTKM+H+ +
Sbjct: 296 CRGKNSKISWTQVETGSAVTWKYPSCILQGDNSMGEFYSVAITNNAQQADTGTKMIHIGR 355
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT SRI+SKGI+AG S+ TYRG V + A +RNFTQCDSLLIG+ CGAHT+PYIES+N
Sbjct: 356 NTRSRIISKGIAAGRSDQTYRGLVRMLPKAEGARNFTQCDSLLIGDRCGAHTVPYIESRN 415
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTS+I D+ LFYCLQRGI EE A+ALIVNGF +EVLQ LPMEFAVEAQKL+
Sbjct: 416 PTAKVEHEATTSRIGDDQLFYCLQRGIAEEDAVALIVNGFCKEVLQTLPMEFAVEAQKLV 475
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 476 SISLEGSVG 484
>gi|114327989|ref|YP_745146.1| cysteine desulfurase activator complex subunit SufB [Granulibacter
bethesdensis CGDNIH1]
gi|114316163|gb|ABI62223.1| ABC transporter-associated protein sufB [Granulibacter bethesdensis
CGDNIH1]
Length = 498
Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats.
Identities = 357/498 (71%), Positives = 417/498 (83%), Gaps = 9/498 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET+D V+ + YK+G+ET I++D APKGL ED IR IS++K EP+W+LEWRL
Sbjct: 1 MPAVAETLDAVKSVTESGYKWGWETEIEMDMAPKGLTEDTIRLISSRKEEPEWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ W TM+ P WARI + IDF DL+YYAAPK GP+SLD+VDPELLRTYEKLGIP++
Sbjct: 61 AFAAWKTMEMPEWARIAHAPIDFQDLHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLK 120
Query: 121 EQEILAGVQTSK---------VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
EQ +LAGV+ ++ +AVDAVFDSVSV TTF+E L K GVIF ISEA+ EHP+
Sbjct: 121 EQALLAGVEGAEALPASASPGIAVDAVFDSVSVATTFRESLAKVGVIFCSISEAVREHPE 180
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LVK+YL +VVP DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN K TGQFERT
Sbjct: 181 LVKQYLGSVVPASDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINAKNTGQFERT 240
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIA++G+YVSYLEGCTAPQRDENQLHAAVVELVALD+A+IKYSTVQNWYPGD++G+GGI
Sbjct: 241 LIIAEDGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAQIKYSTVQNWYPGDAEGRGGI 300
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKRG CRG RSKISWTQ+ETGSAITWKYPSCLL GE S GEFYS+A++ QQ D+
Sbjct: 301 YNFVTKRGACRGARSKISWTQVETGSAITWKYPSCLLLGEGSIGEFYSVAVTTNRQQADT 360
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+H+ NTTS IVSKGISAG SNNTYRG V + A ++RNFTQCDSLLIG+ CGAH
Sbjct: 361 GTKMIHIGPNTTSTIVSKGISAGHSNNTYRGLVKMMPKAQNARNFTQCDSLLIGDLCGAH 420
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIES+N + +EHEATTSKI+D+ LFYC RG+ EE A+ LIVNGF +EVL++LPME
Sbjct: 421 TVPYIESRNPTAKIEHEATTSKIADDQLFYCRSRGLSEEDAVNLIVNGFCKEVLKELPME 480
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKL+ ISLEGSVG
Sbjct: 481 FAVEAQKLLAISLEGSVG 498
>gi|240850613|ref|YP_002972013.1| FeS assembly protein SufB [Bartonella grahamii as4aup]
gi|240267736|gb|ACS51324.1| FeS assembly protein SufB [Bartonella grahamii as4aup]
Length = 503
Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats.
Identities = 395/503 (78%), Positives = 447/503 (88%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +VR+IDVDQYKYGFETNI+ DKAPKGLNEDII+FISAKK+EP+WML WRL
Sbjct: 1 MPAVQETIRQVREIDVDQYKYGFETNIETDKAPKGLNEDIIKFISAKKHEPEWMLTWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P WAR+ YP IDF +LYYYAAPK+ GP+SLD+VDPELL TYEKLGIP++
Sbjct: 61 AYRRWLTMQEPHWARLEYPKIDFQELYYYAAPKNHTGPKSLDEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGVQ--------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV+ + +VAVDAVFDSVSVVTTFK+EL ++GVIF ISEAI
Sbjct: 121 EQEILAGVRKQSDPSTFDDSMSVSGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EH +L+K+YL TVVP+ DN+YAALN+AVFTDGSFVYIPKGVRCPMELSTYFRINE+ TG
Sbjct: 181 IEHSELIKEYLGTVVPISDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIA E SYVSYLEGCTAPQRDENQLHAAVVEL+AL NAEIKYSTVQNWYPGD
Sbjct: 241 QFERTLIIAAEDSYVSYLEGCTAPQRDENQLHAAVVELIALKNAEIKYSTVQNWYPGDKD 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG+ + GEFYSIA++NG
Sbjct: 301 GKGGIYNFVTKRGDCRGDSSKISWTQVETGSAITWKYPSCLLRGDNARGEFYSIAVANGH 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL KNT+SRI+SKGISAGFSNNTYRG+V+ HR A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGKNTSSRIISKGISAGFSNNTYRGQVTAHRKAQNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+CGAHT+PYIE+KN++ EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 DCGAHTVPYIEAKNATAQFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIGISLEGSVG 503
>gi|220925677|ref|YP_002500979.1| FeS assembly protein SufB [Methylobacterium nodulans ORS 2060]
gi|219950284|gb|ACL60676.1| FeS assembly protein SufB [Methylobacterium nodulans ORS 2060]
Length = 489
Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats.
Identities = 382/490 (77%), Positives = 438/490 (89%), Gaps = 2/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR IDVDQYKYGFET I+++K+ KGL+ED+IRFISAKK+EP+WMLEWRL
Sbjct: 1 MPAVQETVDRVRAIDVDQYKYGFETTIEMEKSEKGLSEDVIRFISAKKDEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P+WAR+ Y ID++D+YYYAAPK QSLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMREPTWARVSYEKIDYNDIYYYAAPKRKSA-QSLDEIDPEILKTYEKLGIPLR 119
Query: 121 EQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E E L G+ + VAVDAVFDSVSV TTFK EL K+GVIFMPISEA+ EHP+LV+KYL +
Sbjct: 120 EVEALEGIASENRVAVDAVFDSVSVATTFKAELAKAGVIFMPISEALREHPELVRKYLGS 179
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 180 VVPVTDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGS 239
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RD+NQLHAAVVEL+ALD+AEIKYSTVQNWYPGD+QG+GGIYNFVTKRG
Sbjct: 240 YVSYLEGCTAPRRDDNQLHAAVVELIALDDAEIKYSTVQNWYPGDAQGRGGIYNFVTKRG 299
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL
Sbjct: 300 DCRGANSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAVSNGRQQVDSGTKMIHLG 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTSRI+SKGISAG S NTYRG VS HR A ++RNFT CDSLLIG+ CGAHT+PYIESK
Sbjct: 360 KNTTSRIISKGISAGHSQNTYRGLVSAHRKATNARNFTNCDSLLIGDQCGAHTVPYIESK 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKIS++ LFYC QRG+ EE A ALIVNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 420 NASAVFEHEATTSKISEDQLFYCRQRGLSEEEARALIVNGFVRDVLQQLPMEFAVEAQKL 479
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 480 ISISLEGSVG 489
>gi|163868342|ref|YP_001609551.1| cysteine desulfurase activator complex subunit SufB [Bartonella
tribocorum CIP 105476]
gi|161017998|emb|CAK01556.1| ABC transporter subunit [Bartonella tribocorum CIP 105476]
Length = 503
Score = 582 bits (1499), Expect = e-164, Method: Composition-based stats.
Identities = 396/503 (78%), Positives = 448/503 (89%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +VR+IDVDQYKYGFET I+ DKAPKGLNEDII+FISAKKNEP+WML WRL
Sbjct: 1 MPAVQETIRQVREIDVDQYKYGFETKIKTDKAPKGLNEDIIKFISAKKNEPEWMLTWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P WAR+ YP IDF +LYYYAAPK+ GP+SLD+VDPELL TYEKLGIP++
Sbjct: 61 AYRRWLTMQEPHWARLEYPKIDFQELYYYAAPKNHTGPKSLDEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGVQ--------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV+ + +VAVDAVFDSVSVVTTFK+EL ++GVIF ISEAI
Sbjct: 121 EQEILAGVRKQSDPSTFDDSVSVSGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EH +L+K+YL TVVPVGDN+YAALN+AVFTDGSFVYIPKGVRCPMELSTYFRINE+ TG
Sbjct: 181 IEHSELIKEYLGTVVPVGDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIA E SYVSYLEGCTAPQRDENQLHAAVVEL+AL+NAEIKYSTVQNWYPGD
Sbjct: 241 QFERTLIIAAEDSYVSYLEGCTAPQRDENQLHAAVVELIALENAEIKYSTVQNWYPGDKD 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG+ + GEFYSIA++NG
Sbjct: 301 GKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCLLRGDNARGEFYSIAVANGH 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL KNT+SRI+SKGISAGFSNNTYRG+V+ +R A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGKNTSSRIISKGISAGFSNNTYRGQVTAYRKAQNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+CGAHT+PYIE+KN++ EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 DCGAHTVPYIEAKNATAQFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIGISLEGSVG 503
>gi|300023865|ref|YP_003756476.1| FeS assembly protein SufB [Hyphomicrobium denitrificans ATCC 51888]
gi|299525686|gb|ADJ24155.1| FeS assembly protein SufB [Hyphomicrobium denitrificans ATCC 51888]
Length = 489
Score = 582 bits (1499), Expect = e-164, Method: Composition-based stats.
Identities = 380/489 (77%), Positives = 437/489 (89%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+V+KIDVDQYKYGFET I+ KAPKGL+E +R+ISAKK EP+W+L WRL
Sbjct: 1 MAAVQETIDQVKKIDVDQYKYGFETKIESIKAPKGLDETTVRYISAKKGEPEWLLNWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++RW M +P+WAR+ YP IDF DLYYY+APKS GP+SL++VDPELL TY+KLGIP++
Sbjct: 61 AFQRWKAMTEPTWARVHYPKIDFQDLYYYSAPKSTEGPKSLEEVDPELLETYKKLGIPLK 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQEILAGV +S+VAVDAVFDSVS+VTTFKEEL K+GVIF PISEA+ EHP+LVKKYL +V
Sbjct: 121 EQEILAGVSSSRVAVDAVFDSVSIVTTFKEELAKAGVIFCPISEAVREHPELVKKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSFVY+P+GVRCPMELSTYFRINEK TGQFERTLIIAD+GSY
Sbjct: 181 VPQSDNFYAALNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKQTGQFERTLIIADKGSY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD+QGKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPTRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAQGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG+QQ+DSGTKM+HL K
Sbjct: 301 CRGHHSKISWTQVETGSAITWKYPSCILRGDHSRGEFYSIAVSNGYQQVDSGTKMIHLGK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
N++SRI+SKGI+AG+S NTYRG VS HR A RNFT CDSLLIG+ CGAHT+PYIE+KN
Sbjct: 361 NSSSRIISKGIAAGYSQNTYRGLVSAHRKATGVRNFTNCDSLLIGDKCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
SS + EHEATTSKISD+ LFYC QRG+ +E A+AL+VNGFVR+VLQ LPMEF E QKLI
Sbjct: 421 SSAHFEHEATTSKISDDMLFYCQQRGLSQEEAVALVVNGFVRDVLQHLPMEFMAETQKLI 480
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 481 GISLEGSVG 489
>gi|254502037|ref|ZP_05114188.1| FeS assembly protein SufB [Labrenzia alexandrii DFL-11]
gi|222438108|gb|EEE44787.1| FeS assembly protein SufB [Labrenzia alexandrii DFL-11]
Length = 490
Score = 582 bits (1499), Expect = e-164, Method: Composition-based stats.
Identities = 380/490 (77%), Positives = 439/490 (89%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+V+ IDVDQYKYGF T+I+ +K KGL+E+ +RF+SAKK+EP+WM EWRL
Sbjct: 1 MPAVQETIDQVKAIDVDQYKYGFVTDIESEKGAKGLSEETVRFLSAKKDEPEWMTEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A RR+ M +P WAR+ YP IDFD+LYY+AAPKS+ GP+SLD+VDPELL TYEKLGIP+R
Sbjct: 61 ALRRFQQMDEPDWARVSYPKIDFDELYYWAAPKSVEGPKSLDEVDPELLETYEKLGIPLR 120
Query: 121 EQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQEILAGV VAVDAVFDSVSVVTTFKEELKK+GVIF ISEA+ E+PDLVKKY+ +
Sbjct: 121 EQEILAGVAPENRVAVDAVFDSVSVVTTFKEELKKAGVIFCSISEAMREYPDLVKKYIGS 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+YA LNSAVF+DGSFVYIP+GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 181 VVPVTDNYYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQNTGQFERTLIIADKGS 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVEL+ALD+AEIKYSTVQNW+PGD GKGGIYNFVTKRG
Sbjct: 241 YVSYLEGCTAPQRDENQLHAAVVELIALDDAEIKYSTVQNWFPGDKDGKGGIYNFVTKRG 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL
Sbjct: 301 DCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAVSNGHQQIDSGTKMIHLG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT+SR++SKGISAG S NTYRG +S HR A+++RNFTQCDSLLIG +CGAHT+PYIESK
Sbjct: 361 KNTSSRVISKGISAGKSENTYRGLISAHRKASNARNFTQCDSLLIGQDCGAHTVPYIESK 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ EHEATTSKISD+ +FYCLQRG+ EE A+ALIVNGFV++V+Q+LPMEFAVEAQKL
Sbjct: 421 NATAQFEHEATTSKISDDQMFYCLQRGMNEEEAVALIVNGFVKDVIQQLPMEFAVEAQKL 480
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 481 ISISLEGSVG 490
>gi|260460859|ref|ZP_05809109.1| FeS assembly protein SufB [Mesorhizobium opportunistum WSM2075]
gi|259033436|gb|EEW34697.1| FeS assembly protein SufB [Mesorhizobium opportunistum WSM2075]
Length = 505
Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats.
Identities = 393/505 (77%), Positives = 448/505 (88%), Gaps = 16/505 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV++T+D+VRKIDVDQYKYGF+T I VDKAPKGL+EDIIRFISAKK+EP WMLEWRL
Sbjct: 1 MPAVQDTIDRVRKIDVDQYKYGFQTEIAVDKAPKGLSEDIIRFISAKKDEPSWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF D+YYYAAPKS GP SL DVDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVNYPKIDFQDIYYYAAPKSTPGPSSLSDVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQ----------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
EQEILAGVQ + +VAVDAVFDSVSVVTTFK+EL ++GVIF ISE
Sbjct: 121 EQEILAGVQKTDVSELEEASDNVYKSGRVAVDAVFDSVSVVTTFKKELAQAGVIFCSISE 180
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI EHP+LVKKYL +VVP DNFYA LNSAVFTDGSFV++PKGVRCPMELSTYFR+NEK
Sbjct: 181 AIREHPELVKKYLGSVVPTSDNFYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRMNEKN 240
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERTLIIA+EG+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD
Sbjct: 241 TGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGD 300
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++GKGGIYNFVTKRGDCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SN
Sbjct: 301 AEGKGGIYNFVTKRGDCRGNRSKISWTQVETGSAITWKYPSCILRGDDSQGEFYSIAVSN 360
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G+QQ+DSGTKM+HL KNT+SRI+SKGI+AGFS NTYRG+VS HR A ++RNFT CDSLLI
Sbjct: 361 GYQQVDSGTKMIHLGKNTSSRIISKGIAAGFSQNTYRGQVSAHRKATNARNFTNCDSLLI 420
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G+ CGAHT+PY+E+KNS+ EHEATTSKIS++ FY +QRGIPEE AIALIVNGFV++V
Sbjct: 421 GDQCGAHTVPYMEAKNSTAQFEHEATTSKISEDQKFYVMQRGIPEEEAIALIVNGFVKDV 480
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 IQQLPMEFAVEAQKLIGISLEGSVG 505
>gi|49475627|ref|YP_033668.1| cysteine desulfurase activator complex subunit SufB [Bartonella
henselae str. Houston-1]
gi|49238434|emb|CAF27662.1| ABC transporter subunit [Bartonella henselae str. Houston-1]
Length = 503
Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats.
Identities = 398/503 (79%), Positives = 446/503 (88%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +VR+IDVDQYKYGFET I+ DKAPKGLNEDIIRFISAKK EP+WML+WRL
Sbjct: 1 MPAVQETIRQVREIDVDQYKYGFETKIKTDKAPKGLNEDIIRFISAKKCEPEWMLKWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRWLTM++P WARI YP IDF +L+YYAAPK+ GP+SL++VDPELL TYEKLGIP++
Sbjct: 61 AFRRWLTMQEPDWARIEYPKIDFQELHYYAAPKNHTGPKSLEEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGV--------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV + +VAVDAVFDSVSVVTTFK+EL ++GVIF ISEAI
Sbjct: 121 EQEILAGVRKQSDPSTFDESVYASGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP L+ +YL TVVPVGDN+YAALN+AVFTDGSFVYIPKGVRCPMELSTYFRINE+ TG
Sbjct: 181 IEHPALINQYLGTVVPVGDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVELVAL NAEIKYSTVQNWYPGD +
Sbjct: 241 QFERTLIIADEDSYVSYLEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKE 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
G GGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG+ S GEFYSIA++NG
Sbjct: 301 GNGGIYNFVTKRGDCRGDNSKISWTQIETGSAITWKYPSCLLRGDNSRGEFYSIAVANGH 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL KNT+SRIVSKGISAGFSNNTYRG+V+ HR A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGKNTSSRIVSKGISAGFSNNTYRGQVTAHRKAHNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+CGAHT+PYIE+KN++ EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 DCGAHTVPYIEAKNATAQFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIGISLEGSVG 503
>gi|148261259|ref|YP_001235386.1| cysteine desulfurase activator complex subunit SufB [Acidiphilium
cryptum JF-5]
gi|326404673|ref|YP_004284755.1| FeS assembly protein SufB [Acidiphilium multivorum AIU301]
gi|146402940|gb|ABQ31467.1| Iron-regulated ABC transporter membrane component SufB
[Acidiphilium cryptum JF-5]
gi|325051535|dbj|BAJ81873.1| FeS assembly protein SufB [Acidiphilium multivorum AIU301]
Length = 483
Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats.
Identities = 354/489 (72%), Positives = 417/489 (85%), Gaps = 6/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ET++ V +I YK+GFETNI+++ APKGLNEDI+R ISAKK EP+W+LEWRL
Sbjct: 1 MPAVNETIETVDRISGGGYKFGFETNIEMEFAPKGLNEDIVRLISAKKGEPEWLLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WL+M+DP+WARIR+P ID+ DL+YYAAPK P+SLD+VDPELL YEKLGIP+
Sbjct: 61 AYRAWLSMEDPAWARIRHPKIDYQDLHYYAAPK-KPAPKSLDEVDPELLAMYEKLGIPLN 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG+ AVDAVFDSVSV TTF+E L K+GVIF ISEA+ EHPDLV+KYL +V
Sbjct: 120 ERAALAGI-----AVDAVFDSVSVATTFRESLAKAGVIFCSISEAVREHPDLVRKYLGSV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP GDN+YAALNSAVF+DGSFV++PKGVRCPMELSTYFRIN + TGQFERTLI+A+ G+
Sbjct: 175 VPAGDNYYAALNSAVFSDGSFVFVPKGVRCPMELSTYFRINARNTGQFERTLIVAEAGAS 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALD A IKYSTVQNWYPGD++G+GGIYNFVTKRG
Sbjct: 235 VSYLEGCTAPMRDENQLHAAVVELVALDEATIKYSTVQNWYPGDAEGRGGIYNFVTKRGA 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSAITWKYPSC+L+GE S GEFYS+A++N FQQ D+GTKM+HLA
Sbjct: 295 CRGRNSKISWTQVETGSAITWKYPSCILQGEGSTGEFYSVAVTNNFQQADTGTKMIHLAP 354
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTTS IVSKGISAG SNNTYRG V + A ++RNFTQCDSLLIG+ CGAHT+PYIES+N
Sbjct: 355 NTTSTIVSKGISAGRSNNTYRGLVRIMPRATNARNFTQCDSLLIGDRCGAHTVPYIESRN 414
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI+D+ LFYC RG+ EE A+ L+VNGF R+VL++LPMEFAVEAQKL+
Sbjct: 415 RTAKVEHEATTSKIADDQLFYCRSRGLSEEDAVGLLVNGFCRDVLKELPMEFAVEAQKLL 474
Query: 481 DISLEGSVG 489
+SLEGSVG
Sbjct: 475 AVSLEGSVG 483
>gi|329889572|ref|ZP_08267915.1| feS assembly protein SufB [Brevundimonas diminuta ATCC 11568]
gi|328844873|gb|EGF94437.1| feS assembly protein SufB [Brevundimonas diminuta ATCC 11568]
Length = 488
Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats.
Identities = 360/490 (73%), Positives = 425/490 (86%), Gaps = 3/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M V+ET+D V ++ ++YKYGF T+++ + APKGLN DIIRFIS KK EP+WMLEWRL
Sbjct: 1 MAIVQETIDTVAEL--ERYKYGFTTDVEQEFAPKGLNPDIIRFISEKKGEPEWMLEWRLA 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWL M++P+WA ++Y +D+ DLYYYAAP GP+SLD+VDPELL Y KLGIP++
Sbjct: 59 AYERWLAMEEPTWAAVKYDPVDYQDLYYYAAPVKKEGPKSLDEVDPELLEVYAKLGIPLK 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE+LAGVQ KVAVDAVFDSVSVVTTFKEEL K+GVIFMPISEA+ E+PDLV++YL T
Sbjct: 119 EQEVLAGVQGAPKVAVDAVFDSVSVVTTFKEELAKAGVIFMPISEALREYPDLVRQYLGT 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++AALNSAVF+DGSFVYIP GVRCPMELSTYFRIN TGQFERTLIIAD+GS
Sbjct: 179 VVPVSDNYFAALNSAVFSDGSFVYIPPGVRCPMELSTYFRINASQTGQFERTLIIADKGS 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAAVVE++ALD+AE+KYSTVQNWYPGD++GKGGIYNFVTKR
Sbjct: 239 YVSYLEGCTAPMRDENQLHAAVVEIIALDDAEVKYSTVQNWYPGDAEGKGGIYNFVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+SWTQ+ETGSA+TWKYPSC+L+GE+S GEFYSIAI+NG QQ D+GTKMLHL
Sbjct: 299 DCRGDRSKVSWTQVETGSAVTWKYPSCILKGEESSGEFYSIAITNGHQQADTGTKMLHLG 358
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KN+ SRI++K +SAG S++TYRG VS+H A RNFTQCDSLLIG CGAHTIPYIE +
Sbjct: 359 KNSRSRIIAKTVSAGKSDSTYRGLVSIHSKATGVRNFTQCDSLLIGKECGAHTIPYIEVR 418
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S LEHEATT+++S++ LFY QRG+ EE A+AL+VNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 419 NGSAQLEHEATTTRLSEDQLFYAQQRGLSEEEAVALLVNGFVRDVLQELPMEFAVEAQKL 478
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 479 VAISLEGSVG 488
>gi|86750111|ref|YP_486607.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris HaA2]
gi|86573139|gb|ABD07696.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris HaA2]
Length = 498
Score = 580 bits (1495), Expect = e-163, Method: Composition-based stats.
Identities = 383/498 (76%), Positives = 437/498 (87%), Gaps = 9/498 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ DKAPKGL+EDI+RFISAKKNEPDWML+WRL
Sbjct: 1 MAAVQETVDRVRQIDVDQYRYGFETLIESDKAPKGLSEDIVRFISAKKNEPDWMLQWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP IDF DLYYY+APK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVDYPKIDFQDLYYYSAPKPKKTIGSLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQ---------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E +L GV+ + K+AVDAVFDSVSV TTF+ ELKK+GVIFMPISEAI EHPD
Sbjct: 121 EVALLEGVEPRPGEPNTPSRKIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIKEHPD 180
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LVKKYL TVVP DN+YA LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERT
Sbjct: 181 LVKKYLGTVVPTSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERT 240
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+GSYVSYLEGCTAPQRDENQLHAAVVELV D+AEIKYSTVQNWYPG+S+GKGGI
Sbjct: 241 LIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVTHDDAEIKYSTVQNWYPGNSEGKGGI 300
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DS
Sbjct: 301 YNFVTKRGDCRGNNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDS 360
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL NTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGAH
Sbjct: 361 GTKMIHLGNNTTSRIISKGIAAGRSQNTYRGLVTAHRKAKGARNFTACDSLLIGDQCGAH 420
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPME
Sbjct: 421 TVPYIEAKNSSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKDVLQQLPME 480
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKLI ISLEGSVG
Sbjct: 481 FAVEAQKLISISLEGSVG 498
>gi|299133785|ref|ZP_07026979.1| FeS assembly protein SufB [Afipia sp. 1NLS2]
gi|298591621|gb|EFI51822.1| FeS assembly protein SufB [Afipia sp. 1NLS2]
Length = 499
Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats.
Identities = 382/499 (76%), Positives = 437/499 (87%), Gaps = 10/499 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAP+GL ED IRFISAKKNEP WMLEWRL
Sbjct: 1 MPAVQETVDRVRQIDVDQYRYGFETQIESEKAPRGLTEDTIRFISAKKNEPAWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRWLTM++P+WAR+ YP ID+ DLYYY+APK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AFRRWLTMEEPTWARVDYPKIDYQDLYYYSAPKKKKEVASLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGV----------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
E E+L GV +VAVDAVFDSVSV TTF+ ELKK+GVIFMPIS+AI EHP
Sbjct: 121 EVEVLEGVVRKDEDGNEVSERRVAVDAVFDSVSVATTFQAELKKAGVIFMPISDAIREHP 180
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
DLVKKYL +VVP DNF+A LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFER
Sbjct: 181 DLVKKYLGSVVPTSDNFFATLNSAVFSDGSFVYLPPGVRCPMELSTYFRINERNTGQFER 240
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLIIAD+G+YVSYLEGCTAPQRDENQLHAAVVELVA D+AEIKYSTVQNWYPG+S+GKGG
Sbjct: 241 TLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVAHDDAEIKYSTVQNWYPGNSEGKGG 300
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
IYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNGFQQ+D
Sbjct: 301 IYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGFQQVD 360
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
SGTKM+HL KNTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGA
Sbjct: 361 SGTKMIHLGKNTTSRIISKGIAAGVSQNTYRGLVTAHRKATGARNFTACDSLLIGDKCGA 420
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT+PYIE+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+AL+VNGFVR+VLQ+LPM
Sbjct: 421 HTVPYIEAKNSSTQFEHEATTSKISEDMLFYCVQRGLSQEEAVALVVNGFVRDVLQQLPM 480
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFAVEAQKLI ISLEGSVG
Sbjct: 481 EFAVEAQKLISISLEGSVG 499
>gi|57165208|ref|NP_101908.2| cysteine desulfurase activator complex subunit SufB [Mesorhizobium
loti MAFF303099]
gi|14021081|dbj|BAB47694.1| ABC transporter subunit [Mesorhizobium loti MAFF303099]
Length = 505
Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats.
Identities = 391/505 (77%), Positives = 447/505 (88%), Gaps = 16/505 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV++T+D+VRKIDVDQYKYGF+T I V KAPKGL+EDIIRFISAKK+EP WMLEWRL
Sbjct: 1 MPAVQDTIDRVRKIDVDQYKYGFQTEIAVAKAPKGLSEDIIRFISAKKDEPSWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF D+YYYAAPKS GP SL DVDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVHYPKIDFQDIYYYAAPKSTPGPSSLSDVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQ----------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
EQEILAGVQ + +VAVDAVFDSVSVVTTFK+EL ++GVIF ISE
Sbjct: 121 EQEILAGVQKTDASELEEPSDNVYKSGRVAVDAVFDSVSVVTTFKKELAQAGVIFCSISE 180
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI EHP+LV+KYL +VVP DNFYA LNSAVFTDGSFV++PKGVRCPMELSTYFR+NEK
Sbjct: 181 AIREHPELVQKYLGSVVPTSDNFYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRMNEKN 240
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERTLIIA+EG+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD
Sbjct: 241 TGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGD 300
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++GKGGIYNFVTKRGDCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SN
Sbjct: 301 AEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCILRGDDSSGEFYSIAVSN 360
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G+QQ+DSGTKM+HL KNT+SRI+SKGI+AGFS NTYRG+VS HR A ++RNFT CDSLLI
Sbjct: 361 GYQQVDSGTKMIHLGKNTSSRIISKGIAAGFSQNTYRGQVSAHRKATNARNFTNCDSLLI 420
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G+ CGAHT+PY+E+KNS+ EHEATTSKIS++ FY +QRGIPEE AIALIVNGFV++V
Sbjct: 421 GDQCGAHTVPYMEAKNSTAQFEHEATTSKISEDQKFYVMQRGIPEEEAIALIVNGFVKDV 480
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 IQQLPMEFAVEAQKLIGISLEGSVG 505
>gi|315122394|ref|YP_004062883.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495796|gb|ADR52395.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 489
Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats.
Identities = 437/489 (89%), Positives = 473/489 (96%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M+AV++T+D+VR I+VDQYKYGFETNI+V+++P+GLNED+IRFISAKKNEP+WMLEWRL
Sbjct: 1 MIAVQKTIDQVRDIEVDQYKYGFETNIEVERSPRGLNEDVIRFISAKKNEPEWMLEWRLS 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWL MK+PSWAR+ YP IDF+ LYYY++PKS VGP+SLD+VDPELLR Y+KLGIP+
Sbjct: 61 AYRRWLKMKEPSWARVHYPPIDFNSLYYYSSPKSFVGPRSLDEVDPELLRMYDKLGIPLH 120
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQE LAGVQTSKVAVDA+FDSVS+VTTFKEELKKSG+IFMPISEAI EH DLVKKYLS+V
Sbjct: 121 EQEALAGVQTSKVAVDAIFDSVSIVTTFKEELKKSGIIFMPISEAIHEHSDLVKKYLSSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DNFYAALNSAVFTDGSFVYIPKG+RCPMELSTYFRINE+ TGQFERTLIIADEGSY
Sbjct: 181 VPVADNFYAALNSAVFTDGSFVYIPKGIRCPMELSTYFRINERETGQFERTLIIADEGSY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+RDENQLHAAVVELVALD+AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD
Sbjct: 241 VSYLEGCTAPKRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG+RSKISWTQLETGSAITWKYPSCLLRGE SCGEFYSIAISNGFQQIDSGTKMLHLAK
Sbjct: 301 CRGIRSKISWTQLETGSAITWKYPSCLLRGEYSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTTSRIVSKGISAGFSNNTYRGKVSVHRGA HSRNFTQCDSLLIGNNCGAHT+PYIE+KN
Sbjct: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGATHSRNFTQCDSLLIGNNCGAHTVPYIEAKN 420
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
SSCNLEHEATTSKISD+HLFYCLQRGIPEEAAIALI+NGFV+EVLQKLPMEFAVEAQKLI
Sbjct: 421 SSCNLEHEATTSKISDDHLFYCLQRGIPEEAAIALIINGFVKEVLQKLPMEFAVEAQKLI 480
Query: 481 DISLEGSVG 489
DISLEGSVG
Sbjct: 481 DISLEGSVG 489
>gi|121602810|ref|YP_989100.1| cysteine desulfurase activator complex subunit SufB [Bartonella
bacilliformis KC583]
gi|120614987|gb|ABM45588.1| FeS assembly protein SufB [Bartonella bacilliformis KC583]
Length = 503
Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats.
Identities = 399/503 (79%), Positives = 447/503 (88%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +VR+IDVDQYKYGFETNI++DKAPKGLNEDIIRFISAKK EP+WML WRL
Sbjct: 1 MPAVQETIRQVREIDVDQYKYGFETNIEMDKAPKGLNEDIIRFISAKKGEPEWMLMWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A RW TM++P+WARI+YP I+F DL YYAAPK+ GP+SLD+VDPELL TYEKLGIP++
Sbjct: 61 ALHRWSTMEEPNWARIQYPKINFQDLCYYAAPKNHTGPKSLDEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGVQ--------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV+ + +VAVDAVFDSVSVVTTFKEEL ++GVIF ISEAI
Sbjct: 121 EQEILAGVKKQTENSALDDNIYGSGRVAVDAVFDSVSVVTTFKEELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP L+K+YL TVVPV DN+YAALN+AVFTDGSFVYIPK VRCPMELSTYFRINE+ TG
Sbjct: 181 TEHPTLIKEYLGTVVPVSDNYYAALNAAVFTDGSFVYIPKDVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVELVAL NAEIKYSTVQNWYPGD +
Sbjct: 241 QFERTLIIADENSYVSYLEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKE 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGG+YNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG+ S GEFYSIAI+NG+
Sbjct: 301 GKGGVYNFVTKRGDCRGNHSKISWTQIETGSAITWKYPSCLLRGDNSSGEFYSIAIANGY 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL KNT+SRI+SKGISAGFSNNTYRG+V+ HR A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGKNTSSRIISKGISAGFSNNTYRGQVTAHRKAQNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
NCGAHT+PYIE+KN++ EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 NCGAHTVPYIEAKNATVQFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIGISLEGSVG 503
>gi|146340498|ref|YP_001205546.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. ORS278]
gi|146193304|emb|CAL77320.1| transport protein associated with Fe-S cluster assembly, sufB
[Bradyrhizobium sp. ORS278]
Length = 498
Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats.
Identities = 383/498 (76%), Positives = 440/498 (88%), Gaps = 9/498 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAPKGL+ED IRFIS KKNEP WMLEWRL
Sbjct: 1 MPAVQETVDRVRRIDVDQYRYGFETVIESEKAPKGLSEDTIRFISGKKNEPAWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P+WAR+ YP IDF DLYYYAAPK S+D++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMQEPTWARVDYPKIDFQDLYYYAAPKPKKQLSSIDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQ---------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E IL GV+ T K+AVDAVFDSVSV TTFKEELKK+GVIFMPISEAI E+P+
Sbjct: 121 EVAILEGVEPAPGAGSPETRKIAVDAVFDSVSVATTFKEELKKAGVIFMPISEAIREYPE 180
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LV+KYL +VVP DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERT
Sbjct: 181 LVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERT 240
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+G+YVSYLEGCTAPQRDENQLHAAVVELVA+D+AEIKYSTVQNWYPG+S+GKGGI
Sbjct: 241 LIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGNSEGKGGI 300
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNGFQQ+DS
Sbjct: 301 YNFVTKRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGFQQVDS 360
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL KNT+SRI+SKGI+AG S NTYRG V+ HR A+ +RNFT CDSLLIG+ CGAH
Sbjct: 361 GTKMIHLGKNTSSRIISKGIAAGRSQNTYRGLVTAHRKASGARNFTACDSLLIGDKCGAH 420
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPME
Sbjct: 421 TVPYIEAKNSSATFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQLPME 480
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKLI ISLEGSVG
Sbjct: 481 FAVEAQKLISISLEGSVG 498
>gi|294083584|ref|YP_003550341.1| FeS assembly protein SufB [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663156|gb|ADE38257.1| FeS assembly protein SufB [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 483
Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats.
Identities = 349/489 (71%), Positives = 416/489 (85%), Gaps = 6/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +T++++ +YKYGF T+I+ DKAPKGLNEDIIRFISAKK+EP+WML WRL
Sbjct: 1 MAATTQTIEQMEA-ATGKYKYGFVTDIESDKAPKGLNEDIIRFISAKKDEPEWMLAWRLK 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY++WLTM+ P WA++ ID+ D+YYY+APK +SLD+VDPELL TYEKLGIP+
Sbjct: 60 AYKKWLTMESPDWAKLDIDPIDYQDVYYYSAPKDSEKLKSLDEVDPELLATYEKLGIPLN 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ++LAG VAVDAVFDSVSV TTF+ EL K GVIF PISEAI ++PDLVKKY+ +V
Sbjct: 120 EQKMLAG-----VAVDAVFDSVSVATTFRGELAKVGVIFCPISEAIRDYPDLVKKYMGSV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DN+++ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLIIA++ SY
Sbjct: 175 VPVADNYFSALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIIAEDESY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVA+ +AEIKYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 235 VSYLEGCTAPQRDENQLHAAVVELVAMQDAEIKYSTVQNWYPGDENGKGGIYNFVTKRGA 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+L+G++S GEFYS+A++N QQ D+GTKM+H+ +
Sbjct: 295 CRGDRSKISWTQVETGSAITWKYPSCILQGKESVGEFYSVALTNNMQQADTGTKMIHIGE 354
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+ S I+SKGISAG S N YRG V + GA ++RNFTQCDSLL+G+ CGAHT+PYI S+N
Sbjct: 355 GSRSTIISKGISAGKSQNCYRGLVRMQPGAENARNFTQCDSLLVGDKCGAHTVPYIVSRN 414
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTS+IS++ LFYCLQRGI EE A++LIVNGF +EV+++LPMEFAVEAQKLI
Sbjct: 415 PSAKIEHEATTSRISEDQLFYCLQRGINEEDAVSLIVNGFCKEVMKELPMEFAVEAQKLI 474
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 475 GISLEGSVG 483
>gi|83858480|ref|ZP_00952002.1| hypothetical protein OA2633_03236 [Oceanicaulis alexandrii
HTCC2633]
gi|83853303|gb|EAP91155.1| hypothetical protein OA2633_03236 [Oceanicaulis alexandrii
HTCC2633]
Length = 503
Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats.
Identities = 357/503 (70%), Positives = 423/503 (84%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET++ VR+++ D+YKYGF T I+ ++APKGL+ED +RFISAKK EP+W+LEWRL
Sbjct: 1 MPAVKETIEDVRQLESDKYKYGFTTEIEQERAPKGLSEDTVRFISAKKGEPEWLLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++RW MK+P WA++ YP ID+ + YYYAAPK +SLD+V ELL TY+KLGIP++
Sbjct: 61 AFKRWTQMKEPDWAKVGYPPIDYQEAYYYAAPKDAAKYKSLDEVPQELLDTYKKLGIPLK 120
Query: 121 EQEILAGVQT--------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
E E+L GV+ KVAVDAVFDSVSV TTFKEELKK+GVIFMPISEA+
Sbjct: 121 EAEVLLGVEGAEASAAEARNEGSQRKVAVDAVFDSVSVATTFKEELKKAGVIFMPISEAV 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP+L+KKYL +VVPV DNF+A LNSAVF+DGSFVY+PKGVRCPMELSTYFRIN +GTG
Sbjct: 181 HEHPELIKKYLGSVVPVTDNFFATLNSAVFSDGSFVYVPKGVRCPMELSTYFRINAEGTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLI+ADEG+YVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNW+PGDS
Sbjct: 241 QFERTLIVADEGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWWPGDSD 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGG+YNFVTKR DCRG SK+SWTQ+ETGSAITWKYPSC+L+G+ S GEFYSIA++NG
Sbjct: 301 GKGGVYNFVTKRADCRGRNSKVSWTQVETGSAITWKYPSCVLKGDNSQGEFYSIAVTNGR 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQ D+GTKM+HL +NT SRI+SKGISAG S+ TYRG VSVH A +RNFTQCDSLLIG+
Sbjct: 361 QQADTGTKMIHLGRNTKSRIISKGISAGKSDQTYRGLVSVHGKAEGARNFTQCDSLLIGD 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
CGAHT+PYIE K LEHEATTSK+S+E LFY QRG+ EE+A+AL+VNGF REVLQ
Sbjct: 421 TCGAHTVPYIECKTPKATLEHEATTSKLSEEQLFYARQRGLDEESAVALLVNGFCREVLQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
+LPMEFAVEAQ L+ +SLEGSVG
Sbjct: 481 ELPMEFAVEAQALLKVSLEGSVG 503
>gi|170743214|ref|YP_001771869.1| FeS assembly protein SufB [Methylobacterium sp. 4-46]
gi|168197488|gb|ACA19435.1| FeS assembly protein SufB [Methylobacterium sp. 4-46]
Length = 489
Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats.
Identities = 384/490 (78%), Positives = 436/490 (88%), Gaps = 2/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR IDVDQYKYGFET I+++K+ KGL+ED+IRFISAKK EP+WMLEWRL
Sbjct: 1 MPAVQETVDRVRAIDVDQYKYGFETTIEMEKSEKGLSEDVIRFISAKKQEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P WAR+ Y ID+D+LYYYAAPK QSLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMREPDWARVSYDRIDYDNLYYYAAPK-RKAAQSLDEIDPEILKTYEKLGIPLR 119
Query: 121 EQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E E L G+ VAVDAVFDSVSV TTFK EL K+GVIFMPISEA+ EHPDLV+KYL +
Sbjct: 120 EVEALEGIAPENRVAVDAVFDSVSVATTFKAELAKAGVIFMPISEALREHPDLVRKYLGS 179
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 180 VVPVTDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGS 239
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RD+NQLHAAVVELVALD+AEIKYSTVQNWYPG++QG+GGIYNFVTKRG
Sbjct: 240 YVSYLEGCTAPRRDDNQLHAAVVELVALDDAEIKYSTVQNWYPGNAQGRGGIYNFVTKRG 299
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL
Sbjct: 300 DCRGANSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAVSNGMQQVDSGTKMIHLG 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTSRI+SKGISAG S NTYRG VS H+ A+++RNFT CDSLLIG+ CGAHT+PYIESK
Sbjct: 360 KNTTSRIISKGISAGRSQNTYRGLVSAHKKASNARNFTNCDSLLIGDQCGAHTVPYIESK 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKIS+E LFYC QRG+ EE A ALIVNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 420 NASAVFEHEATTSKISEEQLFYCQQRGLGEEEARALIVNGFVRDVLQQLPMEFAVEAQKL 479
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 480 ISISLEGSVG 489
>gi|319408610|emb|CBI82265.1| ABC transporter subunit [Bartonella schoenbuchensis R1]
Length = 503
Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats.
Identities = 394/503 (78%), Positives = 447/503 (88%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +VR+IDVDQYKYGF+TNI+ DKAPKGLNEDIIRFISAKKNEP+WML WRL
Sbjct: 1 MPAVQETIRQVREIDVDQYKYGFKTNIKTDKAPKGLNEDIIRFISAKKNEPEWMLAWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ RW TM++P WAR+ YP I+F + YYYAAPK+ GP+SLD+VDPELL TYEKLGIP++
Sbjct: 61 AFHRWTTMEEPQWARVEYPKINFQEFYYYAAPKNHTGPKSLDEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGVQ--------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV+ + +VAVDAVFDSVS+VTTFK+EL ++GVIF ISEAI
Sbjct: 121 EQEILAGVRKQADRSPLNDNIYGSGQVAVDAVFDSVSIVTTFKKELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP +K+YL TVVP GDN+YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE+ TG
Sbjct: 181 IEHPAFIKEYLGTVVPAGDNYYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVELVAL NAEIKYSTVQNWYPGD +
Sbjct: 241 QFERTLIIADEDSYVSYLEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKE 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG+ S GEFYSIA++NG+
Sbjct: 301 GKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCLLRGDNSRGEFYSIAVANGY 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL +NT+SRI+SKGISAGFSNNTYRG+V+ H+ A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGQNTSSRIISKGISAGFSNNTYRGQVTAHKKAQNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
NCGAHT+PYIE+KN++ + EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 NCGAHTVPYIEAKNATAHFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIAISLEGSVG 503
>gi|148255357|ref|YP_001239942.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. BTAi1]
gi|146407530|gb|ABQ36036.1| Iron-regulated ABC transporter membrane component SufB
[Bradyrhizobium sp. BTAi1]
Length = 498
Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats.
Identities = 380/498 (76%), Positives = 436/498 (87%), Gaps = 9/498 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAPKGL+ED IR+IS KKNEP WMLEWRL
Sbjct: 1 MPAVQETVDRVRRIDVDQYRYGFETVIESEKAPKGLSEDTIRYISGKKNEPAWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP IDF DLYYY+APK S+D++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVDYPKIDFQDLYYYSAPKPKKQLSSIDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQ---------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E IL GV+ T K+AVDAVFDSVSV TTFKEELKK+GVIFMPISEAI EHP+
Sbjct: 121 EVAILEGVEPKPGAGSPETRKIAVDAVFDSVSVATTFKEELKKAGVIFMPISEAIREHPE 180
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LV+KYL +VVP DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERT
Sbjct: 181 LVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERT 240
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+G+YVSYLEGCTAPQRDENQLHAAVVELVA D+AEIKYSTVQNWYPG+S+G GGI
Sbjct: 241 LIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVAHDDAEIKYSTVQNWYPGNSEGVGGI 300
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DS
Sbjct: 301 YNFVTKRGDCRGNNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDS 360
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL KNT+SRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGAH
Sbjct: 361 GTKMIHLGKNTSSRIISKGIAAGRSQNTYRGLVTAHRKATGARNFTACDSLLIGDRCGAH 420
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPME
Sbjct: 421 TVPYIEAKNSSATFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQLPME 480
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKLI ISLEGSVG
Sbjct: 481 FAVEAQKLISISLEGSVG 498
>gi|114569863|ref|YP_756543.1| cysteine desulfurase activator complex subunit SufB [Maricaulis
maris MCS10]
gi|114340325|gb|ABI65605.1| Iron-regulated ABC transporter membrane component SufB [Maricaulis
maris MCS10]
Length = 491
Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats.
Identities = 347/491 (70%), Positives = 413/491 (84%), Gaps = 2/491 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET++ VR ++ D+YKYGF T+I+ D APKGLNE+I+R ISAKK EP+WML+WRL
Sbjct: 1 MAAVKETIEDVRNLEADKYKYGFTTDIEQDLAPKGLNEEIVRLISAKKGEPEWMLQWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A R+ MK+P WA++ YP ID+ D++YYA PK S+DDV E+L + KLGI ++
Sbjct: 61 ALERFKAMKEPEWAKVNYPKIDYQDIHYYAEPKDGAKYDSIDDVPEEILADFAKLGISLK 120
Query: 121 EQEILAGVQTSK--VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
EQE+L GV+ S+ VAVDAVFDSVSVVTTFK EL K+GVIF ISEA+ EHP+LV+KYL
Sbjct: 121 EQEVLLGVKGSENRVAVDAVFDSVSVVTTFKAELAKAGVIFCSISEALREHPELVRKYLG 180
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+VVP DNF+A LN+AVF+DGSFVY+P GVRCPMELSTYFR+N +GTGQFERTLIIAD+G
Sbjct: 181 SVVPASDNFFATLNTAVFSDGSFVYVPPGVRCPMELSTYFRMNAQGTGQFERTLIIADKG 240
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+YVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNW+PGD GKGG+YNFVTKR
Sbjct: 241 AYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWWPGDENGKGGVYNFVTKR 300
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
GDCRG SKISWTQ+ETGSAITWKYPSC+LRGE S GEFYSIA++NG QQ D+GTKM+HL
Sbjct: 301 GDCRGRNSKISWTQVETGSAITWKYPSCILRGENSRGEFYSIAVTNGRQQADTGTKMIHL 360
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
K +TSRI+SKGISAG S+ TYRG VSVH A +RNFTQCDSLLIG+ CGAHT+PY+E
Sbjct: 361 GKGSTSRIISKGISAGRSDQTYRGLVSVHAKAEGARNFTQCDSLLIGDQCGAHTVPYVEC 420
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
K LEHEATT+K+S++ LFY QRG+ EEAA AL+VNGFVR+VLQ+LPMEFAVEAQ
Sbjct: 421 KTPKAVLEHEATTTKLSEDQLFYARQRGLGEEAATALLVNGFVRDVLQQLPMEFAVEAQA 480
Query: 479 LIDISLEGSVG 489
L+ +SLEGSVG
Sbjct: 481 LLKVSLEGSVG 491
>gi|182677100|ref|YP_001831246.1| FeS assembly protein SufB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632983|gb|ACB93757.1| FeS assembly protein SufB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 506
Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats.
Identities = 376/506 (74%), Positives = 433/506 (85%), Gaps = 17/506 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +ETVD+V+ IDV +YKYGF + I+ DKAPKGLNEDI+RFISAKKNEP W+ EWRL
Sbjct: 1 MAAAKETVDQVKSIDVSEYKYGFFSEIEADKAPKGLNEDIVRFISAKKNEPAWLTEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P WAR+ + +D+ DLYYY+APKS GP+SLD+VDPELL+ YEKLGIP++
Sbjct: 61 AYRRWLTMREPEWARVNFAKVDYQDLYYYSAPKSAAGPKSLDEVDPELLKVYEKLGIPLK 120
Query: 121 EQEILAGVQT-----------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
EQ LAGV K+AVDAVFDSVSVVTTF+EEL K+GVIF PIS
Sbjct: 121 EQAALAGVVAGENEMIDDEGNVVPMPERKIAVDAVFDSVSVVTTFREELAKAGVIFCPIS 180
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EA+ HP+LV+KYL +VVP DNFYA LNSAVF+DGSFVYIP+GVRCPMELSTYFRINE+
Sbjct: 181 EAVHTHPELVQKYLGSVVPTTDNFYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQ 240
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERTLIIAD+GSYVSYLEGCTAP+RDENQLHAAVVEL+ALD+AEIKYSTVQNWYPG
Sbjct: 241 NTGQFERTLIIADKGSYVSYLEGCTAPKRDENQLHAAVVELIALDDAEIKYSTVQNWYPG 300
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D+ GKGGIYNFVTKRGDCRG SKISWTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAIS
Sbjct: 301 DADGKGGIYNFVTKRGDCRGANSKISWTQVETGSAVTWKYPSCVLRGDNSRGEFYSIAIS 360
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
NG QQ+DSGTKM+HL KNTTSR++SKGISAG S NTYRG++S HR A +RNFT CDSLL
Sbjct: 361 NGHQQVDSGTKMIHLGKNTTSRVISKGISAGHSQNTYRGQISSHRKATGARNFTNCDSLL 420
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IGN+CGAHT+PY+ES+N S EHEATTSKIS++ LFYC+QRG+ E A ALIVNGFVR+
Sbjct: 421 IGNSCGAHTVPYLESRNPSTQFEHEATTSKISEDQLFYCMQRGLSAEEATALIVNGFVRD 480
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
VLQ+LPMEFAVEAQKLI +SLEGSVG
Sbjct: 481 VLQQLPMEFAVEAQKLIAVSLEGSVG 506
>gi|319784073|ref|YP_004143549.1| FeS assembly protein SufB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169961|gb|ADV13499.1| FeS assembly protein SufB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 505
Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats.
Identities = 390/505 (77%), Positives = 447/505 (88%), Gaps = 16/505 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV++T+D+VRKIDVDQYKYGF+T I +DKAPKGL+EDIIRFISAKK+EP WMLEWRL
Sbjct: 1 MPAVQDTIDRVRKIDVDQYKYGFQTEIAMDKAPKGLSEDIIRFISAKKDEPSWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+ +P+WAR+ YP IDF D+Y+YAAPKS GP SL DVDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLDEPTWARVHYPKIDFQDIYFYAAPKSTPGPTSLSDVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQ----------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
EQEILAGVQ + +VAVDAVFDSVSVVTTFK+EL ++GVIF ISE
Sbjct: 121 EQEILAGVQKTDASELEEVSDNVYKSGRVAVDAVFDSVSVVTTFKKELAQAGVIFCSISE 180
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI EHP+LVKKYL +VVP DN+YA LNSAVFTDGSFV++PKGVRCPMELSTYFR+NEK
Sbjct: 181 AIREHPELVKKYLGSVVPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRMNEKN 240
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERTLIIA+EG+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD
Sbjct: 241 TGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGD 300
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++GKGGIYNFVTKRGDCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SN
Sbjct: 301 AEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCILRGDDSSGEFYSIAVSN 360
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G+QQ+DSGTKM+HL KNT+SRI+SKGI+AGFS NTYRG+VS HR A ++RNFT CDSLLI
Sbjct: 361 GYQQVDSGTKMIHLGKNTSSRIISKGIAAGFSQNTYRGQVSAHRKATNARNFTNCDSLLI 420
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G+ CGAHT+PY+E+KNS+ EHEATTSKIS++ FY +QRGIPEE AIALIVNGFV++V
Sbjct: 421 GDQCGAHTVPYMEAKNSTAQFEHEATTSKISEDQKFYVMQRGIPEEEAIALIVNGFVKDV 480
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 IQQLPMEFAVEAQKLIGISLEGSVG 505
>gi|115524974|ref|YP_781885.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris BisA53]
gi|115518921|gb|ABJ06905.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris BisA53]
Length = 508
Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats.
Identities = 372/508 (73%), Positives = 433/508 (85%), Gaps = 19/508 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +ETV++VR+IDVDQY+YGFET+I+ DKAPKGL+ED IRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAEQETVERVRRIDVDQYRYGFETDIESDKAPKGLSEDTIRFISAKKNEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WA++ YP ID+ DLYYY+APK S D++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWAKVDYPKIDYQDLYYYSAPKKKPQLSSFDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGV-------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMP 161
E +L GV +VAVDAVFDSVSV TTF+ ELK++GVIFMP
Sbjct: 121 EVAVLEGVVAPEPKPTVDADGNEIEVLPQRRVAVDAVFDSVSVATTFQAELKRAGVIFMP 180
Query: 162 ISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
ISEA+ EHPDLV+KYL TVVP DN++A LNSAVF+DGSFVY+P GVRCPMELSTYFRIN
Sbjct: 181 ISEALREHPDLVRKYLGTVVPTSDNYFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRIN 240
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
E+ TGQFERTLIIAD+G+YVSYLEGCTAPQRDENQLHAAVVELV D+AEIKYSTVQNWY
Sbjct: 241 ERNTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVTHDDAEIKYSTVQNWY 300
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
PG+S+G GGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA
Sbjct: 301 PGNSEGVGGIYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIA 360
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
ISNG+QQ+DSGTKM+HL KNTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDS
Sbjct: 361 ISNGYQQVDSGTKMIHLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDS 420
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LLIG+ CGAHT+PY+E+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV
Sbjct: 421 LLIGDQCGAHTVPYVEAKNSSALFEHEATTSKISEDVLFYCVQRGLNQEEAVGLVVNGFV 480
Query: 462 REVLQKLPMEFAVEAQKLIDISLEGSVG 489
++VLQ+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KDVLQQLPMEFAVEAQKLISISLEGSVG 508
>gi|188583646|ref|YP_001927091.1| FeS assembly protein SufB [Methylobacterium populi BJ001]
gi|179347144|gb|ACB82556.1| FeS assembly protein SufB [Methylobacterium populi BJ001]
Length = 489
Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats.
Identities = 381/490 (77%), Positives = 439/490 (89%), Gaps = 2/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR ID+DQYKYGFET I+++K+ KGL+ED+IRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDRVRSIDIDQYKYGFETVIEMEKSEKGLSEDVIRFISAKKNEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWLTMK+P WAR+ Y +D++D+YYYAAPK GP+SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYKRWLTMKEPEWARVDYDKVDYNDIYYYAAPK-RKGPESLDEIDPEILKTYEKLGIPLR 119
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E E L G+ +VAVDAVFDSVSV TTFK+EL+K+GVIFMPISEAI E+PDLVK YL +
Sbjct: 120 EVEALEGIAPERRVAVDAVFDSVSVATTFKKELEKAGVIFMPISEAIREYPDLVKTYLGS 179
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 180 VVPVTDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGS 239
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RD+NQLHAAVVELVAL++AEIKYSTVQNWYPGD++GKGGIYNFVTKRG
Sbjct: 240 YVSYLEGCTAPKRDDNQLHAAVVELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRG 299
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL
Sbjct: 300 DCRGARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLG 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTSRI+SKGISAG S NTYRG VS H+ A +RNFT CDSLLIG+ CGAHT+PYIESK
Sbjct: 360 KNTTSRIISKGISAGRSQNTYRGLVSAHKKAKGARNFTNCDSLLIGDQCGAHTVPYIESK 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKIS++ FYC QRG+ EE A ALIVNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 420 NASAVFEHEATTSKISEDQKFYCQQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEAQKL 479
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 480 ISISLEGSVG 489
>gi|319404266|emb|CBI77859.1| ABC transporter subunit [Bartonella rochalimae ATCC BAA-1498]
Length = 503
Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats.
Identities = 393/503 (78%), Positives = 442/503 (87%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +V +IDVDQYKYGFETNI+VDKAPKGLNEDIIRFISAKK EP+WML WRL
Sbjct: 1 MPAVQETIRQVSEIDVDQYKYGFETNIEVDKAPKGLNEDIIRFISAKKCEPEWMLTWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRW M+ P WARI+YP I+F +LYYYAAPK+ GP+SLD+VDPELL TYEKLGIP++
Sbjct: 61 AFRRWSKMEVPRWARIKYPKINFQELYYYAAPKNHTGPKSLDEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGV--------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL ++GVIF ISEAI
Sbjct: 121 EQEILAGVKKQADLSTSDDNIYASGQVAVDAVFDSVSVVTTFKEELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP +++YL VVP GDN+YAALN+AVFTDGSFVYIPKGVRCPMELSTYFRINE+ TG
Sbjct: 181 TEHPAFIQEYLGAVVPAGDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVEL+AL NAEIKYSTVQNWYPGD +
Sbjct: 241 QFERTLIIADEDSYVSYLEGCTAPQRDENQLHAAVVELIALKNAEIKYSTVQNWYPGDKE 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG S GEFYSIA++NG
Sbjct: 301 GKGGIYNFVTKRGDCRGDNSKISWTQIETGSAITWKYPSCLLRGNNSRGEFYSIAVANGH 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL +NT+SRI+SKGISAGFSNNTYRG+V+ H+ A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGENTSSRIISKGISAGFSNNTYRGQVTAHKKAKNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+CGAHT+PYIE+KN++ EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 DCGAHTVPYIEAKNATAQFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIGISLEGSVG 503
>gi|116626727|ref|YP_828883.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Solibacter usitatus Ellin6076]
gi|116229889|gb|ABJ88598.1| Iron-regulated ABC transporter membrane component SufB [Candidatus
Solibacter usitatus Ellin6076]
Length = 482
Score = 577 bits (1486), Expect = e-162, Method: Composition-based stats.
Identities = 331/487 (67%), Positives = 407/487 (83%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ + + +YK+GF T+I+ D P+GLNED++R ISAKKNEP+W+LEWRL AYR
Sbjct: 1 MSDSTNTIETFANQEYKWGFVTDIEADAIPRGLNEDVVRLISAKKNEPEWLLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQ 122
WLT+K+P WA + YP ID+ D+ YY++PK+ GP+SLD+VDPELL+TYEKLGIP++E+
Sbjct: 61 HWLTLKEPDWANVHYPKIDYQDIIYYSSPKAKADGPKSLDEVDPELLKTYEKLGIPLQER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
ILAG VAVDAVFDSVSV TTFKE+LK+ G+IF SEA+ EHP+LV++YL +VVP
Sbjct: 121 AILAG-----VAVDAVFDSVSVATTFKEKLKEQGIIFGSFSEAVQEHPELVRQYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+AALNSAVF+DGSF YIPKGV+CPMELSTYFRIN K TGQFERTLI+ADEG+ VS
Sbjct: 176 TSDNFFAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINAKDTGQFERTLIVADEGATVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RD NQLHAAVVELVALDNA+IKYSTVQNWYPGD GKGGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDTNQLHAAVVELVALDNAQIKYSTVQNWYPGDKDGKGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G+ SKISWTQ+ETGSAITWKYPSCLL G+ S GEFYS+A++N +QQ D+GTKM+H+ KNT
Sbjct: 296 GVNSKISWTQVETGSAITWKYPSCLLIGDNSVGEFYSVALTNNWQQADTGTKMIHIGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS IVSKGISAG NTYRG V + + A +RN++QCDSLL+G+ CGAHT PY+E +N+S
Sbjct: 356 TSTIVSKGISAGHGQNTYRGGVKILKSATGARNYSQCDSLLLGDKCGAHTFPYLEVRNTS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKI ++ +FYC QRGI E A+++IV+GF +EV ++LPMEFAVEAQKL+ +
Sbjct: 416 AQVEHEASTSKIGEDQIFYCRQRGISTEDAVSMIVHGFCKEVFRELPMEFAVEAQKLLGV 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|91976928|ref|YP_569587.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris BisB5]
gi|91683384|gb|ABE39686.1| Iron-regulated ABC transporter membrane component SufB
[Rhodopseudomonas palustris BisB5]
Length = 493
Score = 577 bits (1486), Expect = e-162, Method: Composition-based stats.
Identities = 378/493 (76%), Positives = 435/493 (88%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ DKAPKGL+EDI+RFISAKKNEPDWML+WRL
Sbjct: 1 MAAVQETVDRVRQIDVDQYRYGFETLIESDKAPKGLSEDIVRFISAKKNEPDWMLQWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP IDF DLYYY+APK SLD++DPE+L TY+KLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVNYPKIDFQDLYYYSAPKPKKTIGSLDEIDPEILETYKKLGIPLR 120
Query: 121 EQEILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E E+L GV ++AVDAVFDSVSV TTF+ ELKK+GVIFMPISEAI +HP+LV+KY
Sbjct: 121 EVEVLEGVVRPEGERRIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIKQHPELVQKY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVP DN+YA LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERTLIIAD
Sbjct: 181 LGTVVPTTDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+GSYVSYLEGCTAPQRDENQLHAAVVELV D+AEIKYSTVQNWYPG+S+GKGGIYNFVT
Sbjct: 241 KGSYVSYLEGCTAPQRDENQLHAAVVELVTHDDAEIKYSTVQNWYPGNSEGKGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DSGTKM+
Sbjct: 301 KRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL NTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGAHT+PYI
Sbjct: 361 HLGNNTTSRIISKGIAAGRSQNTYRGLVTAHRKAKGARNFTACDSLLIGDQCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KN+S EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPMEFAVEA
Sbjct: 421 EAKNTSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKDVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|146342292|ref|YP_001207340.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. ORS278]
gi|146195098|emb|CAL79123.1| transport protein associated with Fe-S cluster assembly
[Bradyrhizobium sp. ORS278]
Length = 505
Score = 577 bits (1486), Expect = e-162, Method: Composition-based stats.
Identities = 382/505 (75%), Positives = 438/505 (86%), Gaps = 16/505 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+V+ IDVDQY+YGFET I+ +KAPKGL+ED IRFISAKKNEP WMLEWRL
Sbjct: 1 MAAVQETIDRVKGIDVDQYRYGFETQIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP ID+ DLYYY+APK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVGYPKIDYQDLYYYSAPKPKKKVASLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVA----------------VDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
E E+L GV+ VA VDAVFDSVSV TTFKEELKK+GVIFMPISE
Sbjct: 121 EVELLEGVERPTVAAESEDGEAAAPRTKIAVDAVFDSVSVATTFKEELKKAGVIFMPISE 180
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A+ EHPDLV+KYL TVVP DN++A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+
Sbjct: 181 ALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERN 240
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERTLIIAD+G+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPG+
Sbjct: 241 TGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGN 300
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
S+G GGIYNFVTKRGDCRG+ SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISN
Sbjct: 301 SEGVGGIYNFVTKRGDCRGVNSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISN 360
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
GFQQ+DSGTKM+HL KNT+SRI+SKGI+AG S NTYRG VS HR A+ +RNFT CDSLLI
Sbjct: 361 GFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVSAHRKASGARNFTACDSLLI 420
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G+ CGAHT+PYIE+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++V
Sbjct: 421 GDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDV 480
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
LQ+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 LQQLPMEFAVEAQKLISISLEGSVG 505
>gi|316934380|ref|YP_004109362.1| FeS assembly protein SufB [Rhodopseudomonas palustris DX-1]
gi|315602094|gb|ADU44629.1| FeS assembly protein SufB [Rhodopseudomonas palustris DX-1]
Length = 498
Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats.
Identities = 381/498 (76%), Positives = 439/498 (88%), Gaps = 9/498 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAPKGL+EDI+RFISAKKNEPDWML+WR
Sbjct: 1 MAAVQETVDRVRQIDVDQYRYGFETLIESEKAPKGLSEDIVRFISAKKNEPDWMLQWRQE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP IDF DLYYYAAPK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVSYPKIDFQDLYYYAAPKPKKTIGSLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQ---------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E +L GV+ + K+AVDAVFDSVSV TTF+ ELKK+GVIFMPISEAI +HP+
Sbjct: 121 EVALLEGVEPAPGGPDTPSRKIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIRQHPE 180
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LV+KYL +VVP DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERT
Sbjct: 181 LVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERT 240
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+GSYVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPG+S+GKGGI
Sbjct: 241 LIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGKGGI 300
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DS
Sbjct: 301 YNFVTKRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDS 360
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL KNTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGAH
Sbjct: 361 GTKMIHLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDSLLIGDQCGAH 420
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE+KN+S EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPME
Sbjct: 421 TVPYIEAKNASALFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQLPME 480
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKLI ISLEGSVG
Sbjct: 481 FAVEAQKLISISLEGSVG 498
>gi|85716315|ref|ZP_01047288.1| FeS assembly protein SufB [Nitrobacter sp. Nb-311A]
gi|85696831|gb|EAQ34716.1| FeS assembly protein SufB [Nitrobacter sp. Nb-311A]
Length = 493
Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats.
Identities = 385/493 (78%), Positives = 440/493 (89%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAPKGL+ED IRFISAKKNEP+WMLEWRL
Sbjct: 1 MAAVQETVDRVRQIDVDQYRYGFETIIESEKAPKGLSEDTIRFISAKKNEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P+WAR+ YP ID+ DLYYYAAPK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMQEPTWARVDYPKIDYQDLYYYAAPKPKKEISSLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E E L GV KVAVDAVFDSVSV TTF+EELKK+GVIFMPIS AI +HP+LVK+Y
Sbjct: 121 EVEALEGVVRPEGERKVAVDAVFDSVSVATTFQEELKKAGVIFMPISHAIQQHPELVKQY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DNF+A LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERTLIIAD
Sbjct: 181 LGSVVPTSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+GSYVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPG+S+GKGGIYNFVT
Sbjct: 241 KGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGKGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DSGTKML
Sbjct: 301 KRGDCRGAHSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKML 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNTTSRI+SKGI+AG S NTYRG V+ HR AA++RNFT CDSLLIG+ CGAHT+PYI
Sbjct: 361 HLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKAANARNFTACDSLLIGDKCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KN+S EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFVR+VLQ+LPMEFAVEA
Sbjct: 421 EAKNTSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVRDVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|319407272|emb|CBI80911.1| ABC transporter subunit [Bartonella sp. 1-1C]
Length = 503
Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats.
Identities = 393/503 (78%), Positives = 441/503 (87%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +V +IDVDQYKYGFETNI+VDKAPKGLNEDIIRFISAKK EP+WML WRL
Sbjct: 1 MPAVQETIRQVSEIDVDQYKYGFETNIEVDKAPKGLNEDIIRFISAKKCEPEWMLTWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRW M+ P WARI+YP I+F +LYYYAAPK+ GP+SLD+VDPELL TYEKLGIP++
Sbjct: 61 AFRRWSKMEIPRWARIKYPKINFQELYYYAAPKNHTGPKSLDEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGV--------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL ++GVIF ISEAI
Sbjct: 121 EQEILAGVKKQTDLSTSDDNIYASGQVAVDAVFDSVSVVTTFKEELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP +++YL VVP GDN+YAALN+AVFTDGSFVYIPKGV CPMELSTYFRINE+ TG
Sbjct: 181 IEHPAFIQEYLGAVVPAGDNYYAALNAAVFTDGSFVYIPKGVHCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVEL+AL NAEIKYSTVQNWYPGD +
Sbjct: 241 QFERTLIIADEDSYVSYLEGCTAPQRDENQLHAAVVELIALKNAEIKYSTVQNWYPGDKE 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG S GEFYSIA++NG
Sbjct: 301 GKGGIYNFVTKRGDCRGDNSKISWTQIETGSAITWKYPSCLLRGNNSRGEFYSIAVANGH 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL +NT+SRI+SKGISAGFSNNTYRG+V+ H+ A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGENTSSRIISKGISAGFSNNTYRGQVTAHKKAKNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+CGAHTIPYIE+KN++ EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 DCGAHTIPYIEAKNATAQFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIGISLEGSVG 503
>gi|27379450|ref|NP_770979.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
japonicum USDA 110]
gi|27352601|dbj|BAC49604.1| blr4339 [Bradyrhizobium japonicum USDA 110]
Length = 498
Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats.
Identities = 378/498 (75%), Positives = 436/498 (87%), Gaps = 9/498 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETV++V++IDVDQY+YGFET I+ DKAPKGL+E+ ++FIS KKNEP WML+WRL
Sbjct: 1 MPAVQETVERVKRIDVDQYRYGFETLIESDKAPKGLSEETVKFISEKKNEPAWMLQWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP IDF DLYYY+APK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVDYPKIDFQDLYYYSAPKPKKSITSLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT---------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E +L GV+ K+AVDAVFDSVSV TTFK ELKK+GVIFMPISEAI EHP+
Sbjct: 121 EVAMLEGVEPKVGEEDPARRKIAVDAVFDSVSVATTFKAELKKAGVIFMPISEAIREHPE 180
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LV+KYL +VVP DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERT
Sbjct: 181 LVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERT 240
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+GSYVSYLEGCTAPQRDENQLHAAVVELVA D+AEIKYSTVQNWYPG+S+GKGGI
Sbjct: 241 LIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVAHDDAEIKYSTVQNWYPGNSEGKGGI 300
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKRGDCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNGFQQ+DS
Sbjct: 301 YNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISNGFQQVDS 360
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL KNT+SRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGAH
Sbjct: 361 GTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVTAHRKATGARNFTACDSLLIGDKCGAH 420
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPME
Sbjct: 421 TVPYIEAKNSSATFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQLPME 480
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKLI ISLEGSVG
Sbjct: 481 FAVEAQKLISISLEGSVG 498
>gi|312115584|ref|YP_004013180.1| FeS assembly protein SufB [Rhodomicrobium vannielii ATCC 17100]
gi|311220713|gb|ADP72081.1| FeS assembly protein SufB [Rhodomicrobium vannielii ATCC 17100]
Length = 493
Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats.
Identities = 373/493 (75%), Positives = 438/493 (88%), Gaps = 5/493 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+A ++T+++V +IDVD+YKYGF T+I+ +APKGL+ED +RFISAKK EP+W+LEWRL A
Sbjct: 1 MAEQDTIERVSEIDVDKYKYGFTTDIESVRAPKGLSEDTVRFISAKKGEPEWLLEWRLEA 60
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YRRW ++++P+WAR+ Y ID+DDLYYY+APKS GP+SL DVDPELLRTYEKLGIP+RE
Sbjct: 61 YRRWRSIEEPTWARVHYQKIDYDDLYYYSAPKSAEGPKSLADVDPELLRTYEKLGIPLRE 120
Query: 122 QEILAGVQT-----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
Q +LAGV+ +VAVDAVFDSVSVVTTFKEEL ++GVIF PISEA+ +HP+LV+KY
Sbjct: 121 QAVLAGVEGAEVTAPRVAVDAVFDSVSVVTTFKEELGRAGVIFCPISEAVRDHPELVRKY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DN++A LNSAV++DGSFVY+P+GVRCPMELSTYFRINEK TGQFERTLIIAD
Sbjct: 181 LGSVVPTSDNYFATLNSAVYSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+GSYVSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNWYPGD +GKGGIYNFVT
Sbjct: 241 KGSYVSYLEGCTAPMRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDKEGKGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG QQ+DSGTKM+
Sbjct: 301 KRGDCRGRNSKISWTQVETGSAITWKYPSCILRGDGSRGEFYSIAISNGRQQVDSGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNT+SRI+SKGISAG S+NTYRG VS HR A ++RNFTQCDSLLIG+ CGAHTIPYI
Sbjct: 361 HLGKNTSSRIISKGISAGRSDNTYRGLVSAHRRATNARNFTQCDSLLIGDQCGAHTIPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KN++ EHEATTSKISD+ LFYCLQRG+ +E A+ALIVNGFVR+VLQ+LPMEF E
Sbjct: 421 EAKNATAQFEHEATTSKISDDQLFYCLQRGLSQEEAVALIVNGFVRDVLQQLPMEFLAET 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|75675856|ref|YP_318277.1| cysteine desulfurase activator complex subunit SufB [Nitrobacter
winogradskyi Nb-255]
gi|74420726|gb|ABA04925.1| Iron-regulated ABC transporter membrane component SufB [Nitrobacter
winogradskyi Nb-255]
Length = 493
Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats.
Identities = 381/493 (77%), Positives = 438/493 (88%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAPKGL+ED IRFISAKKNEP WMLEWRL
Sbjct: 1 MAAVQETVDRVRQIDVDQYRYGFETIIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++P+WAR+ YP ID+ DLYYY+APK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMQEPTWARVDYPKIDYQDLYYYSAPKPKKEIASLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E E+L GV KVAVDAVFDSVSV TTF+EELKK+GVIFMPIS AI +HP+LVK+Y
Sbjct: 121 EVEVLEGVVRPEGERKVAVDAVFDSVSVATTFQEELKKAGVIFMPISHAIQQHPELVKQY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DNF+A LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERTLIIAD
Sbjct: 181 LGSVVPTSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+GSYVSYLEGCTAPQRDENQLHAAVVELV LD+AEIKYSTVQNWYPG+S+GKGGI+NFVT
Sbjct: 241 KGSYVSYLEGCTAPQRDENQLHAAVVELVTLDDAEIKYSTVQNWYPGNSEGKGGIFNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DSGTKML
Sbjct: 301 KRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKML 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNTTSRI+SKGI+AG S NTYRG V+ HR A ++RNFT CDSLLIG+ CGAHT+PYI
Sbjct: 361 HLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKATNARNFTACDSLLIGDKCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KN+S EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFVR+VLQ+LPMEFAVEA
Sbjct: 421 EAKNTSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVRDVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|154253700|ref|YP_001414524.1| FeS assembly protein SufB [Parvibaculum lavamentivorans DS-1]
gi|154157650|gb|ABS64867.1| FeS assembly protein SufB [Parvibaculum lavamentivorans DS-1]
Length = 482
Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats.
Identities = 368/489 (75%), Positives = 427/489 (87%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AVRETV+ V ++ ++YKYGF T+I+ +KAP GL ED +R+ISAKKNEP+W+LEWRL
Sbjct: 1 MAAVRETVETVGEV--EKYKYGFFTDIESEKAPLGLTEDTVRYISAKKNEPEWLLEWRLA 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRWLTM +P+WA++ YP IDF D YYY+APK + SLD VDP+LL TY KLGIP+
Sbjct: 59 AFRRWLTMTEPTWAKVTYPPIDFQDAYYYSAPKQMAKLDSLDQVDPKLLETYAKLGIPLT 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ++LAG+ AVDAVFDSVSVVTTFKE+L + GVIF P+SEA+ +HP+LVKKYL +V
Sbjct: 119 EQKMLAGI-----AVDAVFDSVSVVTTFKEKLAEVGVIFCPMSEAVQKHPELVKKYLGSV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP+ DNFYA LNSAVF++GSFVYIP+GVRCPMELSTYFRINEK TGQFERTLIIAD+GSY
Sbjct: 174 VPISDNFYATLNSAVFSEGSFVYIPEGVRCPMELSTYFRINEKQTGQFERTLIIADKGSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVELVA D+AEIKYSTVQNW+PGD +GKGG+YNFVTKRGD
Sbjct: 234 VSYLEGCTAPQRDENQLHAAVVELVAHDDAEIKYSTVQNWFPGDEEGKGGVYNFVTKRGD 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG QQ+DSGTKM+HL +
Sbjct: 294 CRGTNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGRQQVDSGTKMIHLGR 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTTSRI+SKGI+AG S+NTYRG VSVHR A RNFTQCDSLLIG+ C AHT+PYIE+KN
Sbjct: 354 NTTSRIISKGIAAGHSSNTYRGLVSVHRKAEDVRNFTQCDSLLIGDRCSAHTVPYIETKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ LEHEATTSKISD+ LFYC+QRGI EE A+ALIVNGF R+VLQ+LPMEFAVEAQKL+
Sbjct: 414 PTALLEHEATTSKISDDQLFYCMQRGIGEEEAVALIVNGFCRDVLQQLPMEFAVEAQKLV 473
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 474 GISLEGSVG 482
>gi|148257193|ref|YP_001241778.1| cysteine desulfurase activator complex subunit SufB [Bradyrhizobium
sp. BTAi1]
gi|146409366|gb|ABQ37872.1| Iron-regulated ABC transporter membrane component SufB
[Bradyrhizobium sp. BTAi1]
Length = 506
Score = 575 bits (1481), Expect = e-162, Method: Composition-based stats.
Identities = 383/506 (75%), Positives = 439/506 (86%), Gaps = 17/506 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+V+ IDVDQY+YGFET I+ +KAPKGL+ED IRFISAKKNEP WMLEWRL
Sbjct: 1 MAAVQETIDRVKGIDVDQYRYGFETVIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +P+WAR+ YP ID+ DLYYYAAPK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPTWARVGYPKIDYQDLYYYAAPKPKKKVASLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT-----------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
E E+L GV+ SK+AVDAVFDSVSV TTFKEELKK+GVIFMPIS
Sbjct: 121 EVELLEGVERPAAAAETDADGEAAAPRSKIAVDAVFDSVSVATTFKEELKKAGVIFMPIS 180
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EA+ EHPDLV+KYL TVVP DN++A LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+
Sbjct: 181 EALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYVPSGVRCPMELSTYFRINER 240
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERTLIIAD+G+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPG
Sbjct: 241 NTGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPG 300
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
+S+G GGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAIS
Sbjct: 301 NSEGVGGIYNFVTKRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAIS 360
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
NGFQQ+DSGTKM+HL KNT+SRI+SKGI+AG S NTYRG VS HR A+ +RNFT CDSLL
Sbjct: 361 NGFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVSAHRKASGARNFTACDSLL 420
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG+ CGAHT+PYIE+KNSS EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++
Sbjct: 421 IGDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKD 480
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
VLQ+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 VLQQLPMEFAVEAQKLISISLEGSVG 506
>gi|304391537|ref|ZP_07373479.1| FeS assembly protein SufB [Ahrensia sp. R2A130]
gi|303295766|gb|EFL90124.1| FeS assembly protein SufB [Ahrensia sp. R2A130]
Length = 512
Score = 575 bits (1481), Expect = e-162, Method: Composition-based stats.
Identities = 382/512 (74%), Positives = 441/512 (86%), Gaps = 23/512 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
MVAV+ET+D V+ +++DQYKYGF T+I+ DKAP GLNED IRFISAKK+EP WML+WRL
Sbjct: 1 MVAVQETIDTVKTLEIDQYKYGFSTDIESDKAPIGLNEDTIRFISAKKDEPQWMLDWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPK-SIVGPQSLDDVDPELLRTYEKLGIPI 119
A+ RW TM +P WAR+ Y ID+ D+YYYAAPK GP+SLD+VDPELLRTYEKLGIP+
Sbjct: 61 AFERWKTMTEPDWARVEYDKIDYQDIYYYAAPKNFAEGPKSLDEVDPELLRTYEKLGIPL 120
Query: 120 REQEILAGV----------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
REQE+L+GV ++ +VAVDAVFDSVSVVTTFK EL K+GV
Sbjct: 121 REQEVLSGVAATKAALAAEDDREEDLGDNIYKSGRVAVDAVFDSVSVVTTFKAELAKAGV 180
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
IF +SEAI +HP+LVKKYL+TVVPV DN++A LN AVFTDGSFVY+PKGVRCPMELSTY
Sbjct: 181 IFCSMSEAIKDHPELVKKYLATVVPVSDNYFATLNCAVFTDGSFVYVPKGVRCPMELSTY 240
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
FRINE+ TGQFERTLIIA+EGSYVSYLEGCTAPQRDENQLHAAVVEL+A+D+AEIKYSTV
Sbjct: 241 FRINEENTGQFERTLIIAEEGSYVSYLEGCTAPQRDENQLHAAVVELIAMDDAEIKYSTV 300
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
QNWYPGD GKGGIYNFVTKR DCRG SK+SWTQ+ETGSA+TWKYPSC+LRG+ S GEF
Sbjct: 301 QNWYPGDENGKGGIYNFVTKRADCRGKNSKVSWTQVETGSAVTWKYPSCILRGDGSQGEF 360
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
YSIA+SNG QQ+DSGTKMLH+ KNTTSRI+SKGISAG S+NTYRG+V+V R A+ +RNFT
Sbjct: 361 YSIAVSNGMQQVDSGTKMLHIGKNTTSRIISKGISAGRSSNTYRGQVNVGRRASDARNFT 420
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
QCDSLLIG+ CGAHT+PYIE+K++S LEHEATTSKISD+ LFYCLQRGIPEE AIALIV
Sbjct: 421 QCDSLLIGDRCGAHTVPYIETKSASAQLEHEATTSKISDDQLFYCLQRGIPEEEAIALIV 480
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
NGFV+EV+Q+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 NGFVKEVIQELPMEFAVEAQKLIGISLEGSVG 512
>gi|170747128|ref|YP_001753388.1| FeS assembly protein SufB [Methylobacterium radiotolerans JCM 2831]
gi|170653650|gb|ACB22705.1| FeS assembly protein SufB [Methylobacterium radiotolerans JCM 2831]
Length = 489
Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats.
Identities = 382/490 (77%), Positives = 439/490 (89%), Gaps = 2/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR ID+DQYKYGFET I+++K+ KG++ED++RFISAKKNEP W+LEWRL
Sbjct: 1 MPAVQETIDRVRSIDLDQYKYGFETTIEMEKSEKGISEDVVRFISAKKNEPAWLLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTMK+P WAR+ Y +D++D+YYYAAPK GP+SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMKEPEWARVSYDKVDYNDIYYYAAPK-RQGPESLDEIDPEILKTYEKLGIPLR 119
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E E+L G+ +VAVDAVFDSVSV TTFK+EL+K+GVIFMPISEA+ EHP+LVKKYL +
Sbjct: 120 EVEVLEGIAPERRVAVDAVFDSVSVATTFKKELEKAGVIFMPISEAVREHPELVKKYLGS 179
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 180 VVPVTDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGS 239
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RD+NQLHAAVVELVALD+AEIKYSTVQNWYPGD+ GKGGIYNFVTKRG
Sbjct: 240 YVSYLEGCTAPKRDDNQLHAAVVELVALDDAEIKYSTVQNWYPGDNDGKGGIYNFVTKRG 299
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL
Sbjct: 300 DCRGARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLG 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTSRI+SKGISAG S NTYRG VS HR A +RNFT CDSLLIG+ CGAHT+PYIESK
Sbjct: 360 KNTTSRIISKGISAGRSQNTYRGLVSAHRKAKGARNFTNCDSLLIGDQCGAHTVPYIESK 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKIS+E FYC QRG+ EE A ALIVNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 420 NASAVFEHEATTSKISEEQKFYCQQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEAQKL 479
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 480 ISISLEGSVG 489
>gi|39935530|ref|NP_947806.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris CGA009]
gi|192291121|ref|YP_001991726.1| cysteine desulfurase activator complex subunit SufB
[Rhodopseudomonas palustris TIE-1]
gi|39649383|emb|CAE27905.1| sufB, needed for fhuF Fe-S center stability [Rhodopseudomonas
palustris CGA009]
gi|192284870|gb|ACF01251.1| FeS assembly protein SufB [Rhodopseudomonas palustris TIE-1]
Length = 493
Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats.
Identities = 382/493 (77%), Positives = 437/493 (88%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAPKGL+EDI+RFISAKKNEPDWML+WRL
Sbjct: 1 MAAVQETVDRVRQIDVDQYRYGFETLIESEKAPKGLSEDIVRFISAKKNEPDWMLQWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM +PSWAR+ YP IDF DLYYY+APK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMTEPSWARVSYPKIDFQDLYYYSAPKPKKQVGSLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E E+L GV K+AVDAVFDSVSV TTF+ ELKK+GVIFMPISEAI HP+LV+KY
Sbjct: 121 EVEVLEGVVRPEGERKIAVDAVFDSVSVATTFQAELKKAGVIFMPISEAIKHHPELVQKY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERTLIIAD
Sbjct: 181 LGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINERNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+GSYVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPG+S+GKGGIYNFVT
Sbjct: 241 KGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGKGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DSGTKM+
Sbjct: 301 KRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL NTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGAHT+PYI
Sbjct: 361 HLGSNTTSRIISKGIAAGKSQNTYRGLVTAHRKAKGARNFTACDSLLIGDQCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KN+S EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFV++VLQ+LPMEFAVEA
Sbjct: 421 EAKNASTLFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|319898939|ref|YP_004159032.1| ABC transporter subunit [Bartonella clarridgeiae 73]
gi|319402903|emb|CBI76454.1| ABC transporter subunit [Bartonella clarridgeiae 73]
Length = 503
Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats.
Identities = 386/503 (76%), Positives = 441/503 (87%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +VR+IDVDQYKYGFETNI++DKAPKGLNEDIIRFISAKK EP+WML WRL
Sbjct: 1 MPAVQETIRQVREIDVDQYKYGFETNIEMDKAPKGLNEDIIRFISAKKCEPEWMLTWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ RW TM+ P WARI+YP I+F +LYYYAAPK+ GP+SLD+VDPELL TYEKLGIP++
Sbjct: 61 AFHRWSTMEIPHWARIKYPKINFQELYYYAAPKNHTGPKSLDEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGV--------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV + +VAVDAVFDSVS+VTTFKEEL ++GVIF ISEAI
Sbjct: 121 EQEILAGVKKQTDLSTSDDNIYASGRVAVDAVFDSVSIVTTFKEELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP +++YL VVP GDN+YAALN+AVFTDGSFVYIPKGVRCPMELS YFRINE+ TG
Sbjct: 181 IEHPAFIQEYLGAVVPAGDNYYAALNAAVFTDGSFVYIPKGVRCPMELSAYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVEL++L NAEIKYSTVQNWYPGD +
Sbjct: 241 QFERTLIIADENSYVSYLEGCTAPQRDENQLHAAVVELISLKNAEIKYSTVQNWYPGDKE 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG S GEFYSIA++NG
Sbjct: 301 GKGGIYNFVTKRGDCRGDNSKISWTQIETGSAITWKYPSCLLRGNNSRGEFYSIAVANGH 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL +NT+SRI+SKGISAGFS+NTYRG+V+ H+ A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGENTSSRIISKGISAGFSSNTYRGQVTAHKKAKNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+C AHT+PYIE+KN++ EHEATTSKISD+ +FY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 DCSAHTVPYIEAKNATAQFEHEATTSKISDDQIFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 QLPMEFAVEAQKLIGISLEGSVG 503
>gi|163853376|ref|YP_001641419.1| FeS assembly protein SufB [Methylobacterium extorquens PA1]
gi|240140791|ref|YP_002965271.1| FeS assembly protein SufB [Methylobacterium extorquens AM1]
gi|254563302|ref|YP_003070397.1| FeS assembly protein SufB [Methylobacterium extorquens DM4]
gi|163664981|gb|ABY32348.1| FeS assembly protein SufB [Methylobacterium extorquens PA1]
gi|240010768|gb|ACS41994.1| FeS assembly protein SufB [Methylobacterium extorquens AM1]
gi|254270580|emb|CAX26583.1| FeS assembly protein SufB [Methylobacterium extorquens DM4]
Length = 489
Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats.
Identities = 380/490 (77%), Positives = 442/490 (90%), Gaps = 2/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR ID+DQYKYGFET I+++K+ KGL+ED++RFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDRVRSIDLDQYKYGFETVIEMEKSEKGLSEDVVRFISAKKNEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWLTMK+P WAR+ Y +D++++YYYAAPK GP+SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYKRWLTMKEPEWARVEYDRVDYNNIYYYAAPK-RKGPESLDEIDPEILKTYEKLGIPLR 119
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E E+L G+ +VAVDAVFDSVSV TTF++EL+K+GVIFMPISEAI E+PDLVKKYL +
Sbjct: 120 EVEVLEGIAPERRVAVDAVFDSVSVATTFRKELEKAGVIFMPISEAIREYPDLVKKYLGS 179
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 180 VVPVTDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGS 239
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RD+NQLHAAVVELVAL++AEIKYSTVQNWYPGD++GKGGIYNFVTKRG
Sbjct: 240 YVSYLEGCTAPKRDDNQLHAAVVELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRG 299
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL
Sbjct: 300 DCRGARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLG 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTSRI+SKGISAG S NTYRG VS H+ A +RNFT CDSLLIG+ CGAHT+PYIESK
Sbjct: 360 KNTTSRIISKGISAGRSQNTYRGLVSAHKKAKGARNFTNCDSLLIGDQCGAHTVPYIESK 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKIS++ FYCLQRG+ EE A ALIVNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 420 NASAVFEHEATTSKISEDQKFYCLQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEAQKL 479
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 480 ISISLEGSVG 489
>gi|92117851|ref|YP_577580.1| cysteine desulfurase activator complex subunit SufB [Nitrobacter
hamburgensis X14]
gi|91800745|gb|ABE63120.1| Iron-regulated ABC transporter membrane component SufB [Nitrobacter
hamburgensis X14]
Length = 493
Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats.
Identities = 381/493 (77%), Positives = 441/493 (89%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KAPKGL+ED +RFISAKKNEP WMLEWRL
Sbjct: 1 MAAVQETVDRVRQIDVDQYRYGFETLIESEKAPKGLSEDTVRFISAKKNEPAWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLTM++PSWAR+ YP ID+ DLYYY+APK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYRRWLTMQEPSWARVNYPKIDYQDLYYYSAPKPKKEVASLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E E+L GV +VAVDAVFDSVSV TTF+EELKK+GVIFMPIS AI +HP+LVK+Y
Sbjct: 121 EVEVLEGVVRPEGERRVAVDAVFDSVSVATTFQEELKKAGVIFMPISHAIQQHPELVKQY 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DNF+A LNSAVF+DGSFVY+P GVRCPMELSTYFRINE+ TGQFERTLIIAD
Sbjct: 181 LGSVVPTSDNFFATLNSAVFSDGSFVYLPPGVRCPMELSTYFRINERNTGQFERTLIIAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPG+S+GKGGI+NFVT
Sbjct: 241 KGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGKGGIFNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRGDCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+DSGTKML
Sbjct: 301 KRGDCRGARSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVDSGTKML 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNTTSRI+SKGI+AG S NTYRG V+ HR A+++RNFT CDSLLIG+ CGAHT+PYI
Sbjct: 361 HLGKNTTSRIISKGIAAGKSQNTYRGLVTAHRKASNARNFTACDSLLIGDQCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E+KN+S EHEATTSKIS++ LFYC+QRG+ +E A+ L+VNGFVR+VLQ+LPMEFAVEA
Sbjct: 421 EAKNTSALFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVRDVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKLI ISLEGSVG
Sbjct: 481 QKLISISLEGSVG 493
>gi|329850524|ref|ZP_08265369.1| feS assembly protein SufB [Asticcacaulis biprosthecum C19]
gi|328840839|gb|EGF90410.1| feS assembly protein SufB [Asticcacaulis biprosthecum C19]
Length = 488
Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats.
Identities = 352/490 (71%), Positives = 427/490 (87%), Gaps = 3/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D V K++ Y++GF T+I+++ APKGLN DI+RFISAKKNEP+WMLE RL
Sbjct: 1 MAAVKETIDTVAKLET--YEHGFVTDIEMEFAPKGLNADIVRFISAKKNEPEWMLELRLA 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ RWLTM++P WA++ Y +++ DLYYYAAPK VGP+SLD++DPE+L+TYEKLGIP+R
Sbjct: 59 AFERWLTMEEPDWAKVNYTRVNYQDLYYYAAPKKKVGPKSLDEIDPEILKTYEKLGIPLR 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ +LAGV+ K AVDAVFDSVSV+TTFK+ELKK GVIF ISEA+ EHP+LV++YL T
Sbjct: 119 EQMVLAGVEGAPKYAVDAVFDSVSVITTFKDELKKYGVIFCSISEALREHPELVRQYLGT 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++AALN+AVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIAD+G+
Sbjct: 179 VVPVSDNYFAALNAAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGA 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVEL+ALD+A IKYSTVQNWYPGD++GKGGIYNFVTKR
Sbjct: 239 YVSYLEGCTAPQRDENQLHAAVVELIALDDANIKYSTVQNWYPGDAEGKGGIYNFVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+SWTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIA++NG QQ D+GTKM+HL
Sbjct: 299 DCRGARSKVSWTQVETGSAVTWKYPSCILRGDDSVGEFYSIAVTNGAQQADTGTKMIHLG 358
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRI+SKG+SAG S+NTYRG VS H A +RNFTQCDSLLIG C AHT+PY+ES
Sbjct: 359 KNTRSRIISKGVSAGRSSNTYRGLVSAHAKATGARNFTQCDSLLIGKTCAAHTVPYVESD 418
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ EHEATT+++S++ LFY +QRG+ +E A+AL+VNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 419 TAKAQFEHEATTTRLSEDQLFYAMQRGLSQEEAVALLVNGFVRDVLQELPMEFAVEAQKL 478
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 479 VAISLEGSVG 488
>gi|218532233|ref|YP_002423049.1| FeS assembly protein SufB [Methylobacterium chloromethanicum CM4]
gi|218524536|gb|ACK85121.1| FeS assembly protein SufB [Methylobacterium chloromethanicum CM4]
Length = 489
Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats.
Identities = 380/490 (77%), Positives = 443/490 (90%), Gaps = 2/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR ID+DQYKYGFET I+++K+ KGL+ED++RFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDRVRSIDLDQYKYGFETVIEMEKSEKGLSEDVVRFISAKKNEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWLTMK+P WAR+ Y +D++++YYYAAPK GP+SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AYKRWLTMKEPEWARVEYDRVDYNNIYYYAAPK-RKGPESLDEIDPEILKTYEKLGIPLR 119
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E E+L G+ +VAVDAVFDSVSV TTF++EL+K+GVIFMPISEAI E+PDLVKKYL +
Sbjct: 120 EVEVLEGIAPERRVAVDAVFDSVSVATTFRKELEKAGVIFMPISEAIREYPDLVKKYLGS 179
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GS
Sbjct: 180 VVPVTDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGS 239
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RD+NQLHAAVVELVAL++AEIKYSTVQNWYPGD++GKGGIYNFVTKRG
Sbjct: 240 YVSYLEGCTAPKRDDNQLHAAVVELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRG 299
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL
Sbjct: 300 DCRGARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLG 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTSRI+SKGISAG S NTYRG VS H+ A ++RNFT CDSLLIG+ CGAHT+PYIESK
Sbjct: 360 KNTTSRIISKGISAGRSQNTYRGLVSAHKKAKNARNFTNCDSLLIGDQCGAHTVPYIESK 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S EHEATTSKIS++ FYCLQRG+ EE A ALIVNGFVR+VLQ+LPMEFAVEAQKL
Sbjct: 420 NASAVFEHEATTSKISEDQKFYCLQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEAQKL 479
Query: 480 IDISLEGSVG 489
I ISLEGSVG
Sbjct: 480 ISISLEGSVG 489
>gi|209885127|ref|YP_002288984.1| FeS assembly protein SufB [Oligotropha carboxidovorans OM5]
gi|209873323|gb|ACI93119.1| FeS assembly protein SufB [Oligotropha carboxidovorans OM5]
Length = 499
Score = 572 bits (1473), Expect = e-161, Method: Composition-based stats.
Identities = 380/499 (76%), Positives = 434/499 (86%), Gaps = 10/499 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETVD+VR+IDVDQY+YGFET I+ +KA +GL ED IRFISAKK+EPDWML+WRL
Sbjct: 1 MPAVQETVDRVRQIDVDQYRYGFETQIESEKAARGLTEDTIRFISAKKDEPDWMLQWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRW TM++P+WAR+ YP ID+ LYYYAAPK SLD++DPE+L+TYEKLGIP+R
Sbjct: 61 AFRRWQTMEEPTWARVDYPKIDYQSLYYYAAPKQKKAIASLDEIDPEILKTYEKLGIPLR 120
Query: 121 EQEILAGV----------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
E EIL GV +VAVDAVFDSVSV TTF+ ELKK+GVIFMPIS AI EHP
Sbjct: 121 EVEILEGVVRKDEEGNEVAERRVAVDAVFDSVSVATTFQAELKKAGVIFMPISHAIREHP 180
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LVKKYL +VVP DN++A LNSAVF+DGSFVY+P GVRCPMELSTYFRINEK TGQFER
Sbjct: 181 ELVKKYLGSVVPTSDNYFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINEKNTGQFER 240
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLIIAD+GSYVSYLEGCTAPQRDENQLHAAVVEL+A D+AEIKYSTVQNWYPGDS+GKGG
Sbjct: 241 TLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELIAHDDAEIKYSTVQNWYPGDSEGKGG 300
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
IYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNG+QQ+D
Sbjct: 301 IYNFVTKRGDCRGKNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAISNGYQQVD 360
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
SGTKM+HL KNTTSRI+SKGI+AG S NTYRG V+ HR A +RNFT CDSLLIG+ CGA
Sbjct: 361 SGTKMIHLGKNTTSRIISKGIAAGVSQNTYRGLVTAHRKATGARNFTACDSLLIGDRCGA 420
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT+PYIESKNSS EHEATTSKIS++ LFYC+QRG+ +E A+AL+VNGFVR+VLQ+LPM
Sbjct: 421 HTVPYIESKNSSTQFEHEATTSKISEDMLFYCVQRGLSQEEAVALVVNGFVRDVLQQLPM 480
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFAVEAQKLI ISLEGSVG
Sbjct: 481 EFAVEAQKLISISLEGSVG 499
>gi|16126107|ref|NP_420671.1| cysteine desulfurase activator complex subunit SufB [Caulobacter
crescentus CB15]
gi|221234877|ref|YP_002517313.1| cysteine desulfurase activator complex subunit SufB [Caulobacter
crescentus NA1000]
gi|13423307|gb|AAK23839.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964049|gb|ACL95405.1| ABC transporter-associated protein sufB [Caulobacter crescentus
NA1000]
Length = 489
Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats.
Identities = 351/491 (71%), Positives = 419/491 (85%), Gaps = 4/491 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETV+ V + ++Y++GF T+I + APKGL+EDI+RFISAKK+EP+WMLEWRL
Sbjct: 1 MAAVKETVETVAAL--EKYEHGFTTDIDQEFAPKGLSEDIVRFISAKKDEPEWMLEWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWL M +P WA++ YP ID+ D YYYAAPK+ GP+SLD+VDPELL YEKLGIP++
Sbjct: 59 AYRRWLAMDEPDWAKVSYPPIDYQDTYYYAAPKTKEGPKSLDEVDPELLAVYEKLGIPLK 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ +LAGV+ + AVDAVFDSVSVVTTFK+EL ++GVIF +SEA+ EHP+LV++YL +
Sbjct: 119 EQAVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAQAGVIFCSMSEAVREHPELVRQYLGS 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++A LNSAVF+DGSFVY+P GVRCPMELSTYFRIN K +GQFERTLIIAD+G+
Sbjct: 179 VVPTSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAKDSGQFERTLIIADKGA 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKR 298
YVSYLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 239 YVSYLEGCTAPMRDENQLHAAVVELVLLDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKR 298
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
DCRG RSK+SWTQ+ETGSAITWKYPSC+LRGE S GEFYSIA++NG QQ D+GTKM+HL
Sbjct: 299 ADCRGDRSKVSWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAVTNGHQQADTGTKMIHL 358
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
NT SRIV+KGISAG S +TYRG VS H A +RNFTQCDSLLIG +C AHT+PYIE+
Sbjct: 359 GANTRSRIVAKGISAGKSTSTYRGLVSAHPKAKGARNFTQCDSLLIGKDCAAHTVPYIEA 418
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+N EHEATT+++SD+ LFYC QRG+ EE ++AL+VNGFV++VLQ+LPMEFAVEAQK
Sbjct: 419 RNGQSVFEHEATTTRLSDDQLFYCQQRGLSEEESVALLVNGFVKDVLQQLPMEFAVEAQK 478
Query: 479 LIDISLEGSVG 489
L+ ISLEGSVG
Sbjct: 479 LVAISLEGSVG 489
>gi|254420611|ref|ZP_05034335.1| FeS assembly protein SufB [Brevundimonas sp. BAL3]
gi|196186788|gb|EDX81764.1| FeS assembly protein SufB [Brevundimonas sp. BAL3]
Length = 488
Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats.
Identities = 351/490 (71%), Positives = 424/490 (86%), Gaps = 3/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D V + ++Y +GF ++I+ + AP+GLN DI+RFIS KK EP+WMLEWRL
Sbjct: 1 MAAVKETIDAVAAL--EKYAHGFTSDIEQEFAPRGLNADIVRFISEKKGEPEWMLEWRLA 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWL M++P+WA ++Y +D+ DL+YYAAPK GP+SLD+VDPE+L Y+KLGIP++
Sbjct: 59 AYERWLAMEEPTWAAVKYEPVDYQDLFYYAAPKQKEGPKSLDEVDPEILEIYKKLGIPLK 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE+LAGVQ +VAVDAVFDSVSVVTTFKEEL K GVIFMPISEA+ E+P+LV++YL +
Sbjct: 119 EQEVLAGVQGAPRVAVDAVFDSVSVVTTFKEELAKVGVIFMPISEALREYPELVRQYLGS 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++AALNSAVF+DGSFVYIP GVRCPMELSTYFRIN TGQFERTLIIAD+GS
Sbjct: 179 VVPVSDNYFAALNSAVFSDGSFVYIPPGVRCPMELSTYFRINASQTGQFERTLIIADKGS 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
Y SYLEGCTAP RDENQLHAAVVE+VALD+AE+KYSTVQNWYPGD++GKGGIYNFVTKR
Sbjct: 239 YCSYLEGCTAPMRDENQLHAAVVEIVALDDAEVKYSTVQNWYPGDAEGKGGIYNFVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+SWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIAI+NG QQ D+GTKM+HL
Sbjct: 299 DCRGDRSKVSWTQVETGSAVTWKYPSCILKGDDSSGEFYSIAITNGCQQADTGTKMIHLG 358
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRI++K +SAG S++TYRG VSVH A RNFTQCDSLLIG CG+HTIPYIE++
Sbjct: 359 KNTKSRIIAKAVSAGKSDSTYRGLVSVHPKATGVRNFTQCDSLLIGKECGSHTIPYIEAR 418
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S LEHEATT+++SD+ +FY QRG+ +E A+AL+VNGFVR+V+QKLPMEFAVEAQKL
Sbjct: 419 NGSAQLEHEATTTRLSDDQMFYAQQRGLSQEEAVALLVNGFVRDVMQKLPMEFAVEAQKL 478
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 479 VAISLEGSVG 488
>gi|308806552|ref|XP_003080587.1| ABC transporter subunit (ISS) [Ostreococcus tauri]
gi|116059048|emb|CAL54755.1| ABC transporter subunit (ISS) [Ostreococcus tauri]
Length = 960
Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats.
Identities = 303/488 (62%), Positives = 383/488 (78%), Gaps = 5/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
A E VD+++++ YK+GF T I+ + P GL+ED++R ISAKKNEPDWML++RL A
Sbjct: 478 SAKEEEVDRIQEMLNKPYKWGFSTTIETETIPAGLSEDVVRMISAKKNEPDWMLDFRLKA 537
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+R+WLTM++P W+ YP ID+ + YY+APKS+ +SLD+VDPELL T++KLGIP+ E
Sbjct: 538 FRKWLTMEEPDWSDNSYPQIDYQGVSYYSAPKSMEKKKSLDEVDPELLATFDKLGIPLNE 597
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q+ L + VAVDAVFDSVS+ TTFKE+L K+GVIF ISEA+ ++P+LVKK+L +VV
Sbjct: 598 QKRL-----TNVAVDAVFDSVSIGTTFKEDLLKAGVIFCSISEAVHDYPELVKKHLGSVV 652
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PV DN++ ALNSAVF+DGSFVYIPKGV PMELSTYFRIN + GQFERTLI+A++ SYV
Sbjct: 653 PVADNYFTALNSAVFSDGSFVYIPKGVVSPMELSTYFRINAESAGQFERTLIVAEDDSYV 712
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP D+NQLHAAVVE+ A NAE+KYSTVQNWY GD GKGGIYNFVTKRG C
Sbjct: 713 SYLEGCTAPAYDDNQLHAAVVEISAGKNAEVKYSTVQNWYAGDENGKGGIYNFVTKRGLC 772
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+G SKISWTQ+ETGS+ITWKYPS +L G+ S GEF+S+A++N QQ D+GTKM+H+ KN
Sbjct: 773 KGDNSKISWTQVETGSSITWKYPSVVLAGDNSIGEFFSVALTNNAQQADTGTKMIHIGKN 832
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T SRIVSKGISAG S N YRG V V A +RN++QCDS+LIG+ GA+T PYI+ K
Sbjct: 833 TRSRIVSKGISAGKSKNVYRGLVQVGPNAVGARNYSQCDSMLIGDKAGANTYPYIQVKEP 892
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEA+TSKI ++ LFY QRGI E A+ +I++GF EV +LP+EFA E +L+
Sbjct: 893 SARVEHEASTSKIGEDQLFYFQQRGIDPEEAVGVIISGFCSEVFNELPLEFAAEVNQLMS 952
Query: 482 ISLEGSVG 489
+ LEGSVG
Sbjct: 953 LKLEGSVG 960
>gi|295689540|ref|YP_003593233.1| FeS assembly protein SufB [Caulobacter segnis ATCC 21756]
gi|295431443|gb|ADG10615.1| FeS assembly protein SufB [Caulobacter segnis ATCC 21756]
Length = 489
Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats.
Identities = 351/491 (71%), Positives = 416/491 (84%), Gaps = 4/491 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETV+ V + ++Y++GF T I + APKGL+EDI+RFISAKK+EP WMLEWRL
Sbjct: 1 MAAVKETVETVAAL--EKYEHGFTTEIDQEFAPKGLSEDIVRFISAKKDEPAWMLEWRLD 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWL M +P WA++ YP ID+ D YYYAAPK+ GP+SLD+VDPELL YEKLGIP++
Sbjct: 59 AYRRWLAMDEPDWAKVSYPPIDYQDTYYYAAPKTKEGPKSLDEVDPELLAVYEKLGIPLK 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ +LAGV+ + AVDAVFDSVSVVTTFK+EL ++GVIF +SEAI EHP+LV++YL +
Sbjct: 119 EQAVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAQAGVIFCSMSEAIREHPELVRQYLGS 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++A LNSAVF+DGSFVY+P GVRCPMELSTYFRIN K +GQFERTLIIAD+ +
Sbjct: 179 VVPTSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAKDSGQFERTLIIADKAA 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKR 298
YVSYLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 239 YVSYLEGCTAPMRDENQLHAAVVELVLLDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKR 298
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
DCRG RSK+SWTQ+ETGSAITWKYPSC+LRGE S GEFYSIA++NG QQ D+GTKM+HL
Sbjct: 299 ADCRGDRSKVSWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAVTNGHQQADTGTKMIHL 358
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
NT SRIV+KGISAG S +TYRG VS H A +RNFTQCDSLLIG +C AHT+PYIE+
Sbjct: 359 GANTRSRIVAKGISAGKSTSTYRGLVSAHPKAKGARNFTQCDSLLIGKDCAAHTVPYIEA 418
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+N EHEATT+++SD+ LFYC QRG+ +E A+AL+VNGFV++VLQ+LPMEFAVEAQK
Sbjct: 419 RNGQSVFEHEATTTRLSDDQLFYCQQRGLSQEEAVALLVNGFVKDVLQQLPMEFAVEAQK 478
Query: 479 LIDISLEGSVG 489
L+ ISLEGSVG
Sbjct: 479 LVAISLEGSVG 489
>gi|126462855|ref|YP_001043969.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides ATCC 17029]
gi|332558884|ref|ZP_08413206.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides WS8N]
gi|126104519|gb|ABN77197.1| Iron-regulated ABC transporter membrane component SufB [Rhodobacter
sphaeroides ATCC 17029]
gi|332276596|gb|EGJ21911.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides WS8N]
Length = 509
Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats.
Identities = 347/493 (70%), Positives = 415/493 (84%), Gaps = 9/493 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RET++ V+ + +YKYG+ET I++D APKGLNEDI+R ISAK +EP+WM EWRL AYRR
Sbjct: 18 RETIETVQAM-AGKYKYGWETEIEMDFAPKGLNEDIVRLISAKNDEPEWMTEWRLQAYRR 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL M++P WA + YP ID+ D+YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 77 WLQMEEPRWAMLDYPEIDYQDIYYYAKPKSMDVKPKSLDEVDPKLLETYKKLGIPLKEQA 136
Query: 124 ILAGVQT-------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+LAGV+ +VAVDAVFDSVSV TTF++EL K+GVIF ISEA+ EHP+LVKKY
Sbjct: 137 LLAGVEGAEVPDAPRQVAVDAVFDSVSVGTTFQKELAKAGVIFCSISEAVREHPELVKKY 196
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DN++A LNSAVF+DGSFVYIP G RCPMELSTYFRIN + TGQFERTLIIAD
Sbjct: 197 LGSVVPQSDNYFATLNSAVFSDGSFVYIPPGTRCPMELSTYFRINAENTGQFERTLIIAD 256
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+YVSYLEGCTAP+RD NQLHAAVVE+V L++AE+KYSTVQNWYPGD +G+GGIYNFVT
Sbjct: 257 KGAYVSYLEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDEEGRGGIYNFVT 316
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR DCRG RSK+ WTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM+
Sbjct: 317 KRADCRGARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANNAQQADTGTKMI 376
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PYI
Sbjct: 377 HLGKNTRSRIVSKGISAGRAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPYI 436
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF +EVLQ LPMEFA+EA
Sbjct: 437 EVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAMEA 496
Query: 477 QKLIDISLEGSVG 489
Q L+ ISLEGSVG
Sbjct: 497 QALVAISLEGSVG 509
>gi|148555826|ref|YP_001263408.1| cysteine desulfurase activator complex subunit SufB [Sphingomonas
wittichii RW1]
gi|148501016|gb|ABQ69270.1| Iron-regulated ABC transporter membrane component SufB
[Sphingomonas wittichii RW1]
Length = 490
Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats.
Identities = 338/490 (68%), Positives = 404/490 (82%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M VR Y++GF T+I+ D APKGL+E+ +RFISAKK EP+WML+WRL
Sbjct: 1 MSDVRNKAAFDAAARASNYEWGFTTDIEQDFAPKGLSEETVRFISAKKGEPEWMLDWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WLTM P WA++ P ID+ D YYYA PK+ SLD+VDPE+L+ YEKLGIPI
Sbjct: 61 AYRHWLTMTPPDWAKLDVPPIDYQDAYYYAEPKAKKALGSLDEVDPEILKVYEKLGIPIE 120
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ++LAGV+ KVAVDAVFDSVSV TTF+ EL+K+GVIF ISEAI ++P+LV+K+L
Sbjct: 121 EQKVLAGVEGARKVAVDAVFDSVSVATTFRAELEKAGVIFRSISEAIRDYPELVRKWLGK 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+ DN++AALN AVF+DG+FVYIP+GVRCPMELSTYFRIN + TGQFERTLI+AD+GS
Sbjct: 181 VVPMHDNYFAALNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVADKGS 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+VSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD++G+GGIYNFVTKR
Sbjct: 241 HVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYNFVTKRA 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G SK+SWTQ+ETGSAITWKYPSC+L GE S GEFYS+A++N QQ D+GTKM+HL
Sbjct: 301 LCQGRNSKVSWTQVETGSAITWKYPSCVLAGENSVGEFYSVAVTNNRQQADTGTKMIHLG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
K + S IVSKGISAG S+NTYRG V V A +RNFTQCDSLL+G+ CGAHT+PYIE K
Sbjct: 361 KGSRSTIVSKGISAGRSDNTYRGLVRVAPTAEGARNFTQCDSLLLGDRCGAHTVPYIEVK 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +EHEATTSKISD+ LFY + RG+ +EA++ALIVNGF +EVLQ+LPMEFAVEAQKL
Sbjct: 421 NPSAQIEHEATTSKISDDQLFYAMSRGLDQEASVALIVNGFAKEVLQQLPMEFAVEAQKL 480
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 481 LGISLEGSVG 490
>gi|221639872|ref|YP_002526134.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides KD131]
gi|221160653|gb|ACM01633.1| Iron-regulated ABC transporter membrane component SufB [Rhodobacter
sphaeroides KD131]
Length = 509
Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats.
Identities = 347/493 (70%), Positives = 416/493 (84%), Gaps = 9/493 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RET++ V+ + +YKYG+ET I++D APKGLNEDI+R ISAK +EP+WM EWRL AYRR
Sbjct: 18 RETIETVQAM-AGKYKYGWETEIEMDFAPKGLNEDIVRLISAKNDEPEWMTEWRLQAYRR 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL M++P WA + YP ID+ D+YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 77 WLQMEEPRWAMLDYPEIDYQDIYYYAKPKSMDVKPKSLDEVDPKLLETYKKLGIPLKEQA 136
Query: 124 ILAGVQT-------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+LAGV+ +VAVDAVFDSVSV TTF++EL K+GVIF ISEA+ EHP+LVKKY
Sbjct: 137 LLAGVEGAEVPDAPRQVAVDAVFDSVSVGTTFQKELAKAGVIFCSISEAVREHPELVKKY 196
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DN++A LNSAVF+DGSFVYIP+G RCPMELSTYFRIN + TGQFERTLIIAD
Sbjct: 197 LGSVVPQSDNYFATLNSAVFSDGSFVYIPRGTRCPMELSTYFRINAENTGQFERTLIIAD 256
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+YVSYLEGCTAP+RD NQLHAAVVE+V L++AE+KYSTVQNWYPGD +G+GGIYNFVT
Sbjct: 257 KGAYVSYLEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDEEGRGGIYNFVT 316
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR DCRG RSK+ WTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM+
Sbjct: 317 KRADCRGARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANNAQQADTGTKMI 376
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PYI
Sbjct: 377 HLGKNTRSRIVSKGISAGRAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPYI 436
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF +EVLQ LPMEFA+EA
Sbjct: 437 EVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAMEA 496
Query: 477 QKLIDISLEGSVG 489
Q L+ ISLEGSVG
Sbjct: 497 QALVAISLEGSVG 509
>gi|302383290|ref|YP_003819113.1| FeS assembly protein SufB [Brevundimonas subvibrioides ATCC 15264]
gi|302193918|gb|ADL01490.1| FeS assembly protein SufB [Brevundimonas subvibrioides ATCC 15264]
Length = 488
Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats.
Identities = 350/490 (71%), Positives = 421/490 (85%), Gaps = 3/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D V + ++Y++GF ++I+ + AP+GL+ DI+RFIS KK EP+WMLEWRL
Sbjct: 1 MAAVQETIDAVAAL--EKYEHGFTSDIETEYAPRGLSADIVRFISEKKGEPEWMLEWRLA 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWL M++P+WA ++Y +D+ L+YYAAPK GP+SLD+VDPE+L Y KLGIP+
Sbjct: 59 AYERWLAMEEPTWASVKYEPVDYQSLFYYAAPKKKDGPKSLDEVDPEILAIYAKLGIPLG 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ +LAGV+ + AVDAVFDSVSVVTTFK EL K GVIFMPISEA+ E+PDLV++YL +
Sbjct: 119 EQAVLAGVEGAPRYAVDAVFDSVSVVTTFKAELAKVGVIFMPISEALREYPDLVRQYLGS 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++AALNSAVF+DGSFVYIP GVRCPMELSTYFRIN TGQFERTLIIAD+GS
Sbjct: 179 VVPVSDNYFAALNSAVFSDGSFVYIPPGVRCPMELSTYFRINASQTGQFERTLIIADKGS 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD++GKGGIYNFVTKR
Sbjct: 239 YVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+SWTQ+ETGSA+TWKYPSC+LRGE S GEFYSIAI+NG QQ D+GTKM+HL
Sbjct: 299 DCRGDRSKVSWTQVETGSAVTWKYPSCVLRGEDSSGEFYSIAITNGHQQADTGTKMIHLG 358
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KN+ SRI++K +SAG S++TYRG VSVH A RNFTQCDSLLIG +CG+HT+PYIE++
Sbjct: 359 KNSKSRIIAKAVSAGKSDSTYRGLVSVHPKATGVRNFTQCDSLLIGGDCGSHTVPYIEAR 418
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S LEHEATT+++SD+ LFY QRG+ +E A+AL+VNGFVR+V+QKLPMEFAVEAQKL
Sbjct: 419 NGSAQLEHEATTTRLSDDQLFYAQQRGLSQEEAVALLVNGFVRDVMQKLPMEFAVEAQKL 478
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 479 VAISLEGSVG 488
>gi|315499748|ref|YP_004088551.1| fes assembly protein sufb [Asticcacaulis excentricus CB 48]
gi|315417760|gb|ADU14400.1| FeS assembly protein SufB [Asticcacaulis excentricus CB 48]
Length = 488
Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats.
Identities = 350/490 (71%), Positives = 420/490 (85%), Gaps = 3/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET++ V+K++ Y +GF T+I+ + APKGLN DI+RFISAKKNEP WML++RL
Sbjct: 1 MAAVKETIETVQKLET--YAHGFVTDIETEYAPKGLNADIVRFISAKKNEPQWMLDYRLA 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ RW +M +P WA++RY +D+ DLYYYAAPK SLD+VDPELL Y KLGIP++
Sbjct: 59 AFERWQSMDEPDWAKVRYQKVDYQDLYYYAAPKPKPKLNSLDEVDPELLAVYAKLGIPLK 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE+LAGV + K AVDAVFDSVSVVTTFKEELKKSGVIF ISEA+ EHP+LVK+YL +
Sbjct: 119 EQEVLAGVASAPKYAVDAVFDSVSVVTTFKEELKKSGVIFCSISEALREHPELVKEYLGS 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++AALN+AVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIAD+G+
Sbjct: 179 VVPVSDNYFAALNAAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGA 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAAVVELVA+++A IKYSTVQNWYPGD++GKGGIYNFVTKR
Sbjct: 239 YVSYLEGCTAPMRDENQLHAAVVELVAMEDASIKYSTVQNWYPGDAEGKGGIYNFVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+SWTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIA++NG QQ D+GTKM+HL
Sbjct: 299 DCRGARSKVSWTQVETGSAVTWKYPSCILRGDDSVGEFYSIAVTNGMQQADTGTKMIHLG 358
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRI+SKG+SAG S+NTYRG VS H A +RNFTQCDSLLIG C AHT+PY+ES
Sbjct: 359 KNTRSRIISKGVSAGKSSNTYRGLVSAHAKAGGARNFTQCDSLLIGKTCAAHTVPYVESD 418
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+S EHEATT+++S++ LFY +QRG+ +E A+AL+VNGFVREVLQ+LPMEFAVEAQKL
Sbjct: 419 TASAQFEHEATTTRLSEDQLFYAMQRGLSQEEAVALLVNGFVREVLQELPMEFAVEAQKL 478
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 479 LAISLEGSVG 488
>gi|153003771|ref|YP_001378096.1| cysteine desulfurase activator complex subunit SufB
[Anaeromyxobacter sp. Fw109-5]
gi|152027344|gb|ABS25112.1| FeS assembly protein SufB [Anaeromyxobacter sp. Fw109-5]
Length = 479
Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats.
Identities = 326/483 (67%), Positives = 402/483 (83%), Gaps = 6/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T ++ ++ +Y+YGF T+I+ D+ P+GL+EDI+R ISAKKNEP +MLEWRL AYR WL
Sbjct: 3 TAQQLHELTQQKYRYGFVTDIEADQLPRGLSEDIVRLISAKKNEPQFMLEWRLKAYRHWL 62
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + YP ID+ D+ YY+APK S+D+VDPEL R +EKLGIP+ EQ+ LA
Sbjct: 63 TLEEPKWANVTYPPIDYQDIVYYSAPKQKKPLASMDEVDPELKRAFEKLGIPLAEQQRLA 122
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G VAVDAVFDSVSV TT+K++L GVIF SEA+ EHP LV+K+L +VVP DN
Sbjct: 123 G-----VAVDAVFDSVSVATTYKKKLADQGVIFCSFSEAVREHPALVEKWLGSVVPYSDN 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN K TGQFERTLI+ADEG+YVSYLEG
Sbjct: 178 YFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTLIVADEGAYVSYLEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAPQRDENQLHAAVVELVALD A+IKYSTVQNWYPGD++GKGGIYNFVTKRG ++
Sbjct: 238 CTAPQRDENQLHAAVVELVALDGAQIKYSTVQNWYPGDAEGKGGIYNFVTKRGKAM-RKA 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
KISWTQ+ETGSAITWKYPSC+L+G+ + GEFYS+A++N QQ D+GTKM+H+ +NT S I
Sbjct: 297 KISWTQVETGSAITWKYPSCILQGDDAVGEFYSVALTNHRQQADTGTKMIHVGRNTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+SKGISAG NTYRG V + +GA +RN++QCDSLLIG+ CGAHT PYIE +N S +E
Sbjct: 357 ISKGISAGRGQNTYRGLVKMMKGAEGARNYSQCDSLLIGDRCGAHTFPYIEVRNPSAKVE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEATTSKIS++ LFYC QRGIP+E A+++IVNGF ++VL++LPMEFAVEAQKL+ +SLEG
Sbjct: 417 HEATTSKISEDQLFYCKQRGIPDEDAVSMIVNGFAKQVLKELPMEFAVEAQKLLGMSLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|319405707|emb|CBI79330.1| ABC transporter subunit [Bartonella sp. AR 15-3]
Length = 503
Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats.
Identities = 387/503 (76%), Positives = 438/503 (87%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +VR+IDVDQYKYGFET I+ DKAPKGLNEDIIRFISAKK EP+WML WRL
Sbjct: 1 MSAVQETIRQVREIDVDQYKYGFETKIETDKAPKGLNEDIIRFISAKKCEPEWMLTWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRW MK+P WARI YP I+F +LYYYAAPK+ GP+SL++VDPELL TYEKLGIP++
Sbjct: 61 AFRRWSKMKEPRWARIEYPKINFQELYYYAAPKNHTGPKSLNEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGVQ--------------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV KVAVDAVFDSVSVVTTFKEEL ++G+IF ISEAI
Sbjct: 121 EQEILAGVTKQEDLSTRDDNMYAAGKVAVDAVFDSVSVVTTFKEELARAGIIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP +++YL VVP GDN+YAALN+AVFTDGSFVYIPKGVRCPMELSTYFRINE+ TG
Sbjct: 181 IEHPAFIREYLGAVVPAGDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVEL++L NAEIKYSTVQNWYPGD +
Sbjct: 241 QFERTLIIADEDSYVSYLEGCTAPQRDENQLHAAVVELISLKNAEIKYSTVQNWYPGDKE 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+E GSAITWKYPSCLLRG S GEFYSIA++NG+
Sbjct: 301 GKGGIYNFVTKRGDCRGDNSKISWTQIEAGSAITWKYPSCLLRGNNSRGEFYSIAVANGY 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL +NT+SRI+SKGISAGFS+NTYRG+V+ HR A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMIHLGENTSSRIISKGISAGFSSNTYRGQVTAHRKAKNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+C AHT+PYIE+KN++ EHEATTSKISD+ LFY +QRGI EE AIALI+NGFV+EV+Q
Sbjct: 421 DCSAHTVPYIETKNATAQFEHEATTSKISDDQLFYVMQRGISEEEAIALIINGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEFAVEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFAVEAQKLIGISLEGSVG 503
>gi|49474207|ref|YP_032249.1| cysteine desulfurase activator complex subunit SufB [Bartonella
quintana str. Toulouse]
gi|49239711|emb|CAF26087.1| ABC transporter subunit [Bartonella quintana str. Toulouse]
Length = 503
Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats.
Identities = 391/503 (77%), Positives = 439/503 (87%), Gaps = 14/503 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+ +V +I VDQYKYGFET I+ +KAPKGLNEDIIRFISAKK EP+WML WRL
Sbjct: 1 MPAVQETIRQVHEIGVDQYKYGFETKIKTEKAPKGLNEDIIRFISAKKREPEWMLTWRLQ 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ RWL M++P WARI YP IDF L+YYAAPK+ GP+SL++VDPELL TYEKLGIP++
Sbjct: 61 AFHRWLIMQEPDWARIEYPQIDFQGLHYYAAPKNHTGPKSLEEVDPELLATYEKLGIPLK 120
Query: 121 EQEILAGV--------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EQEILAGV + +VAVDAVFDSVSVVTTFK+EL ++GVIF ISEAI
Sbjct: 121 EQEILAGVRKQSDLSTFDDRIYASGQVAVDAVFDSVSVVTTFKKELARAGVIFCSISEAI 180
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
EHP L+K+YL TVVP GDN+YAALN+AVFTDGSFVYIPKGVRCPMELSTYFRINE+ TG
Sbjct: 181 IEHPTLIKEYLGTVVPAGDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINERNTG 240
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
QFERTLIIADE SYVSYLEGCTAPQRDENQLHAAVVELVAL NAEIKYSTVQNWYPGD
Sbjct: 241 QFERTLIIADENSYVSYLEGCTAPQRDENQLHAAVVELVALKNAEIKYSTVQNWYPGDKD 300
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSCLLRG+ S GEF+SIA++NG+
Sbjct: 301 GKGGIYNFVTKRGDCRGDNSKISWTQIETGSAITWKYPSCLLRGDNSRGEFHSIAVANGY 360
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
QQIDSGTKM+HL KNT+SRIVSKGISAGF+NNTYRG+V HR A ++RNFTQCDSLLIGN
Sbjct: 361 QQIDSGTKMVHLGKNTSSRIVSKGISAGFANNTYRGQVIAHRKAQNARNFTQCDSLLIGN 420
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+CGAHT+PYIE+KN++ EHEATTSKISD+ LFY +QRGIPEE AIALIVNGFV+EV+Q
Sbjct: 421 DCGAHTVPYIEAKNATAQFEHEATTSKISDDQLFYVMQRGIPEEEAIALIVNGFVKEVIQ 480
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
KLPMEF VEAQKLI ISLEGSVG
Sbjct: 481 KLPMEFVVEAQKLIGISLEGSVG 503
>gi|197105183|ref|YP_002130560.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
gi|196478603|gb|ACG78131.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
Length = 489
Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats.
Identities = 348/491 (70%), Positives = 419/491 (85%), Gaps = 4/491 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV++TV++V+ + ++YK+GF T I + APKGLNEDI+RFISAKK+EP+WMLEWRL
Sbjct: 1 MAAVKQTVEQVQSL--EKYKHGFITEIDQEFAPKGLNEDIVRFISAKKDEPEWMLEWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRW +++P+WA++ +P ID+ D +YYAAPK GP+SLD+VDPELL TY+KLGIP+R
Sbjct: 59 AFRRWQALEEPAWAKVSFPRIDYQDAHYYAAPKQKAGPKSLDEVDPELLETYKKLGIPLR 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE+LAGV+ + AVDAVFDSVSVVTTFK+EL +GVIF +SEAI +H DLV++YL +
Sbjct: 119 EQEVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAAAGVIFCSMSEAIRDHGDLVRRYLGS 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++A LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + +GQFERTLIIAD GS
Sbjct: 179 VVPVSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENSGQFERTLIIADAGS 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKR 298
YVSYLEGCTAP RDENQLHAAVVELVA+D+AEIKYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 239 YVSYLEGCTAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKR 298
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
DCRG RSK+SWTQ+ETGS+ITWKYPSC+LRG S GEFYSIAI+NG QQ D+GTKM+HL
Sbjct: 299 ADCRGDRSKVSWTQVETGSSITWKYPSCVLRGNGSVGEFYSIAITNGRQQADTGTKMIHL 358
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
NT SRI+SKGISAG S+NTYRG VS H A +RNFTQCDSLLIG C AHT+PYIE+
Sbjct: 359 GANTRSRIISKGISAGKSSNTYRGLVSAHPKAKGARNFTQCDSLLIGKRCAAHTVPYIEA 418
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+N EHEATT+++S++ LFY +QRG+ +E A+ L+VNGFVR+VLQ+LPMEFAVEAQK
Sbjct: 419 RNGQAVFEHEATTTRLSEDQLFYAMQRGLSQEEAVQLLVNGFVRDVLQELPMEFAVEAQK 478
Query: 479 LIDISLEGSVG 489
L+ ISLEGSVG
Sbjct: 479 LVAISLEGSVG 489
>gi|167646550|ref|YP_001684213.1| cysteine desulfurase activator complex subunit SufB [Caulobacter
sp. K31]
gi|167348980|gb|ABZ71715.1| FeS assembly protein SufB [Caulobacter sp. K31]
Length = 489
Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats.
Identities = 346/491 (70%), Positives = 412/491 (83%), Gaps = 4/491 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV++T+D V + ++Y++GF T+I+ + APKGL+EDI+RFISAKK+EP WML+WRL
Sbjct: 1 MAAVKQTIDTVASL--EKYEHGFTTDIEQEFAPKGLSEDIVRFISAKKDEPQWMLDWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWL +++P+WA++ +P ID+ D YYYAAP G SLD+VDP++L Y KLGIP++
Sbjct: 59 AYRRWLELEEPTWAKVDFPKIDYQDSYYYAAPTQKAGIASLDEVDPDILAVYAKLGIPLK 118
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE+LAGV + AVDAVFDSVSVVTTFK+EL GVIF +SEAI EHP+LVK+YL +
Sbjct: 119 EQEVLAGVVGAPRYAVDAVFDSVSVVTTFKKELAAVGVIFCSMSEAIGEHPELVKQYLGS 178
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN+YA LNSAVF+DGSFVYIP GVRCPMELSTYFRIN K +GQFERTLIIAD+G+
Sbjct: 179 VVPTSDNYYACLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAKDSGQFERTLIIADKGA 238
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKR 298
Y SYLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 239 YCSYLEGCTAPMRDENQLHAAVVELVLLDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKR 298
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
DCRG RSK+SWTQ+ETGSAITWKYPSC+LRGE S GEFYSIA++NG QQ D+GTKM+HL
Sbjct: 299 ADCRGDRSKVSWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAVTNGHQQADTGTKMIHL 358
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
NT SRIV+KGISAG S +TYRG VS H A +RNFTQCDSLLIG C AHT+PYIE+
Sbjct: 359 GANTKSRIVAKGISAGKSTSTYRGLVSAHPKAKGARNFTQCDSLLIGKTCAAHTVPYIEA 418
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+N EHEATT+++SD+ LFYC QRG+ +E A+AL+VNGFV++VLQ+LPMEFAVEAQK
Sbjct: 419 RNGQSVFEHEATTTRLSDDQLFYCQQRGLSQEEAVALLVNGFVKDVLQQLPMEFAVEAQK 478
Query: 479 LIDISLEGSVG 489
L+ ISLEGSVG
Sbjct: 479 LVAISLEGSVG 489
>gi|46203571|ref|ZP_00051333.2| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Magnetospirillum
magnetotacticum MS-1]
Length = 486
Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats.
Identities = 376/487 (77%), Positives = 436/487 (89%), Gaps = 2/487 (0%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++ET+D+VR ID+DQYKYGFET I+++K+ KGL+ED+IRFISAKKNEP W+LEWRL AY+
Sbjct: 1 MQETIDRVRSIDLDQYKYGFETVIEMEKSEKGLSEDVIRFISAKKNEPAWLLEWRLDAYK 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
RWLTMK+P WAR+ Y +D++D+YYYAAPK GP+SLDD+DPE+L+TYEKLGIP+RE E
Sbjct: 61 RWLTMKEPEWARVAYDKVDYNDIYYYAAPK-RQGPESLDDIDPEILKTYEKLGIPLREVE 119
Query: 124 ILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
L G+ +VAVDAVFDSVSV TTFK+EL+K+GVIFMPISEA+ E+PDLVK YL +VVP
Sbjct: 120 ALEGIAPERRVAVDAVFDSVSVATTFKKELEKAGVIFMPISEAVREYPDLVKTYLGSVVP 179
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
V DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRINE+ TGQFERTLIIAD+GSYVS
Sbjct: 180 VTDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVS 239
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP+RD+NQLHAAVVELVAL++AEIKYSTVQNWYPGD++GKGGIYNFVTKRGDCR
Sbjct: 240 YLEGCTAPKRDDNQLHAAVVELVALEDAEIKYSTVQNWYPGDNEGKGGIYNFVTKRGDCR 299
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQ+DSGTKM+HL +NT
Sbjct: 300 GARSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGMQQVDSGTKMIHLGRNT 359
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TSRI+SKGISAG S NTYRG VS H+ A +RNFT CDSLLIG+ CGAHT+PYIESKN+S
Sbjct: 360 TSRIISKGISAGRSQNTYRGLVSAHKKAKGARNFTNCDSLLIGDQCGAHTVPYIESKNAS 419
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
EHEATTSKIS++ FYC QRG+ EE A ALIVNGFVR+VLQ+LPMEFAVEAQKLI I
Sbjct: 420 AVFEHEATTSKISEDQKFYCQQRGLSEEEATALIVNGFVRDVLQQLPMEFAVEAQKLISI 479
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 480 SLEGSVG 486
>gi|103486167|ref|YP_615728.1| cysteine desulfurase activator complex subunit SufB [Sphingopyxis
alaskensis RB2256]
gi|98976244|gb|ABF52395.1| Iron-regulated ABC transporter membrane component SufB
[Sphingopyxis alaskensis RB2256]
Length = 495
Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats.
Identities = 334/473 (70%), Positives = 398/473 (84%), Gaps = 1/473 (0%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
Y++G+ +I+ D APKGL ED +RFISAKKNEP+WML+WRL A+R W TM+ P WA++
Sbjct: 23 DYEHGWSADIETDFAPKGLTEDTVRFISAKKNEPEWMLDWRLKAFRHWQTMETPDWAKLN 82
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT-SKVAVD 136
P ID+ D YYYAAPK SLD+VDPE+L Y KLGIPI EQ++LAGV+ KVAVD
Sbjct: 83 VPPIDYQDAYYYAAPKPKPKLSSLDEVDPEILEVYRKLGIPIEEQKVLAGVEGARKVAVD 142
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
AVFDSVSV TTF+EELK++GVIF+ ISEAI E+P+LVKK+L VVP+ DN++A LN AVF
Sbjct: 143 AVFDSVSVATTFREELKRAGVIFLSISEAIREYPELVKKWLGRVVPMHDNYFATLNCAVF 202
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+DG+FVY+P+GVRCPMELSTYFRIN + TGQFERTLI+AD+G+YVSYLEGCTAP RDENQ
Sbjct: 203 SDGTFVYVPEGVRCPMELSTYFRINAENTGQFERTLIVADKGAYVSYLEGCTAPMRDENQ 262
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVELVALD+AEIKYSTVQNWYPG+++G GGIYNFVTKR C+G RSK+SWTQ+ETG
Sbjct: 263 LHAAVVELVALDDAEIKYSTVQNWYPGNAEGLGGIYNFVTKRALCQGKRSKVSWTQVETG 322
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
SAITWKYPSC+L G+ S GEFYS+A++N FQQ D+GTKM+H K T S IVSKGISAG S
Sbjct: 323 SAITWKYPSCVLNGDDSVGEFYSVAVTNNFQQADTGTKMIHNGKRTRSTIVSKGISAGKS 382
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
NNTYRG V V A RNFTQCDSLL+G+ CGAHT+PYIE +N + +EHEATTSKISD
Sbjct: 383 NNTYRGLVRVAPNAEGVRNFTQCDSLLLGDRCGAHTVPYIEVRNPTATVEHEATTSKISD 442
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ LFY +QRG+ +E A+ALIVNGF +EVLQ+LPMEFAVEAQKL+ ISLEGSVG
Sbjct: 443 DQLFYAMQRGLGQEEAVALIVNGFAKEVLQQLPMEFAVEAQKLLGISLEGSVG 495
>gi|126661120|ref|ZP_01732200.1| component of SufBCD complex [Cyanothece sp. CCY0110]
gi|126617596|gb|EAZ88385.1| component of SufBCD complex [Cyanothece sp. CCY0110]
Length = 480
Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats.
Identities = 314/490 (64%), Positives = 391/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P+GLNED+IR ISAKKNEP++MLE+RL
Sbjct: 1 MSAT-----TVKNLVNQPYKYGFVTDIEADTIPRGLNEDVIRLISAKKNEPEFMLEFRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AY++WL M +P+W + YP ID+ ++ YY+APK ++LD+VDP LL T+EKLGIP+
Sbjct: 56 AYQQWLKMTEPTWPHVNYPKIDYQNIIYYSAPKQKKEKLKNLDEVDPALLETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDA+FDSVSV TT+KE+L + GVIF ISEA+ EHP+LVKKYL +
Sbjct: 116 SEQKRLS-----NVAVDAIFDSVSVGTTYKEKLAEDGVIFCSISEALEEHPELVKKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPVGDNF+AALN+AVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 171 VVPVGDNFFAALNAAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNWY GD GKGGIYNFVTKRG
Sbjct: 231 SVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDENGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V + A +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 KNTRSTIISKGISAGNSKNSYRGLVQMGPKAKGARNYSQCDSMLIGDNAEANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGI EE AI+++V+GF ++VL +LPMEFA EA KL
Sbjct: 411 NNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAISMLVSGFCQDVLSELPMEFASEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|172035601|ref|YP_001802102.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
ATCC 51142]
gi|171697055|gb|ACB50036.1| iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
Length = 494
Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats.
Identities = 315/490 (64%), Positives = 391/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P+GLNED+IR ISAKKNEPD+MLE+RL
Sbjct: 15 MSAT-----TVKNLVNQPYKYGFVTDIEADTIPRGLNEDVIRLISAKKNEPDFMLEFRLK 69
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AY++WL M +P+W + YP ID+ ++ YY+APK ++LD+VDP LL T+EKLGIP+
Sbjct: 70 AYQQWLKMTEPTWPHVNYPKIDYQNIIYYSAPKQKKEKLKNLDEVDPALLETFEKLGIPL 129
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDA+FDSVSV TT+KE+L + GVIF ISEA+ EHP+LVKKYL +
Sbjct: 130 SEQKRLS-----NVAVDAIFDSVSVGTTYKEKLAEDGVIFCSISEALEEHPELVKKYLGS 184
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPVGDNF+AALN+AVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 185 VVPVGDNFFAALNAAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTGQFERTLIVAEEGA 244
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNWY GD GKGGIYNFVTKRG
Sbjct: 245 SVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDENGKGGIYNFVTKRG 304
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 305 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIG 364
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V + A +RN++QCDS+LIG+N A+T PYI+
Sbjct: 365 KNTRSTIISKGISAGNSKNSYRGLVQMGPKAKGARNYSQCDSMLIGDNAEANTFPYIQVD 424
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGI EE AI+++V+GF ++VL +LPMEFA EA KL
Sbjct: 425 NNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAISMLVSGFCQDVLSELPMEFASEADKL 484
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 485 LSLKLEGTVG 494
>gi|296282945|ref|ZP_06860943.1| cysteine desulfurase activator complex subunit SufB [Citromicrobium
bathyomarinum JL354]
Length = 497
Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats.
Identities = 340/473 (71%), Positives = 403/473 (85%), Gaps = 1/473 (0%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
Y++G+ ++I+ D APKGL+ED +RFISAKK EP+WMLEWRL AYR+WLTM +P WA+I
Sbjct: 25 DYEFGWHSDIETDYAPKGLSEDTVRFISAKKKEPEWMLEWRLKAYRKWLTMTEPDWAKIG 84
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT-SKVAVD 136
YPAID+ D YYYAAPK +SLD++DPE+ Y+KLGIP+ EQE+LAGV+ KVAVD
Sbjct: 85 YPAIDYQDAYYYAAPKKKEELESLDELDPEIKSVYDKLGIPLAEQEVLAGVKGARKVAVD 144
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
AVFDSVSV TTF+EEL+K+GVIF+ ISEAI EHP+LVKK+L VVP DN++A LNSAVF
Sbjct: 145 AVFDSVSVATTFREELQKAGVIFLSISEAIREHPELVKKWLGRVVPQNDNYFACLNSAVF 204
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+DG+FVYIP+GVRCPMELSTYFRIN + TGQFERTLI+A++GSYVSYLEGCTAP RDENQ
Sbjct: 205 SDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQ 264
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVELVA+D+AEIKYSTVQNWYPG+S+G GGIYNFVTKRG C+G RSKISWTQ+ETG
Sbjct: 265 LHAAVVELVAMDDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGLCQGARSKISWTQVETG 324
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
SA+TWKYPSC+L GE S GEFYS+A++N QQ D+GTKM+H K + S I+SKGISAG S
Sbjct: 325 SAVTWKYPSCVLNGENSVGEFYSVAVTNNHQQADTGTKMIHNGKGSRSTIISKGISAGQS 384
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
NNTYRG V V A RN T+CDSLL+G+ CGAHT+PYIE KN + +EHEATTSKISD
Sbjct: 385 NNTYRGLVRVAANAEGVRNRTECDSLLLGDRCGAHTVPYIEVKNPTAQIEHEATTSKISD 444
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ LFY QRG+ EEAAIALIVNGF +EVL++LPMEFAVEAQKL+ ISLEGSVG
Sbjct: 445 DQLFYAQQRGLDEEAAIALIVNGFAKEVLKELPMEFAVEAQKLLAISLEGSVG 497
>gi|146278397|ref|YP_001168556.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides ATCC 17025]
gi|145556638|gb|ABP71251.1| Iron-regulated ABC transporter membrane component SufB [Rhodobacter
sphaeroides ATCC 17025]
Length = 509
Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats.
Identities = 345/493 (69%), Positives = 413/493 (83%), Gaps = 9/493 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RET++ V+ + +YKYG+ET I++D APKGLNEDI+R IS K +EP+WM EWRL AYRR
Sbjct: 18 RETIETVQAM-AGKYKYGWETEIEMDFAPKGLNEDIVRLISTKNDEPEWMTEWRLAAYRR 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W+ M++P WA + YP ID+ DLYYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 77 WVQMEEPRWAMLNYPEIDYQDLYYYAKPKSMDVKPKSLDEVDPKLLETYKKLGIPLKEQA 136
Query: 124 ILAGVQT-------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+LAGV+ +VAVDAVFDSVSV TTFK EL K+GVIF ISEA+ EHP+LVKKY
Sbjct: 137 LLAGVEGADGPDAPRQVAVDAVFDSVSVGTTFKAELAKAGVIFCSISEAVREHPELVKKY 196
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DN++A LNSAVF+DGSFVYIP G RCPMELSTYFRIN + TGQFERTLIIAD
Sbjct: 197 LGSVVPQSDNYFATLNSAVFSDGSFVYIPPGTRCPMELSTYFRINAENTGQFERTLIIAD 256
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+YVSYLEGCTAP+RD NQLHAAVVE+V L++AE+KYSTVQNWYPGD +G+GGIYNFVT
Sbjct: 257 KGAYVSYLEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDEEGRGGIYNFVT 316
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR DCRG RSK+ WTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM+
Sbjct: 317 KRADCRGARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANNAQQADTGTKMI 376
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PYI
Sbjct: 377 HLGKNTRSRIVSKGISAGKAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPYI 436
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E +N+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF +EVL+ LPMEFA+EA
Sbjct: 437 EVRNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLRALPMEFAMEA 496
Query: 477 QKLIDISLEGSVG 489
Q L+ ISLEGSVG
Sbjct: 497 QALVAISLEGSVG 509
>gi|158334403|ref|YP_001515575.1| cysteine desulfurase activator complex subunit SufB [Acaryochloris
marina MBIC11017]
gi|158304644|gb|ABW26261.1| FeS assembly protein SufB [Acaryochloris marina MBIC11017]
Length = 478
Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats.
Identities = 312/480 (65%), Positives = 385/480 (80%), Gaps = 5/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V + YKYGF T+I+V+ PKGL+ED+IR ISAKK EP +MLE+RL AYR+WL MK
Sbjct: 4 TVENLVNQPYKYGFVTDIEVETIPKGLSEDVIRLISAKKEEPAFMLEFRLKAYRQWLKMK 63
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P+W + YPAID+ D+ YY+APK +SLDDVDP LL T++KLGIP+ EQ+ L+
Sbjct: 64 EPTWPHVDYPAIDYQDITYYSAPKEQEKKKSLDDVDPALLETFDKLGIPLSEQKRLS--- 120
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TTFKE+L K GVIF ISEA+ + P+LV+KYL +VVP+ DNF++
Sbjct: 121 --NVAVDAVFDSVSVATTFKEQLAKEGVIFCSISEALKDFPELVEKYLGSVVPINDNFFS 178
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFVYIPKGV+CPMELSTYFRIN +G GQFERTLIIA+EGS VSYLEGCTA
Sbjct: 179 ALNSAVFSDGSFVYIPKGVKCPMELSTYFRINTEGAGQFERTLIIAEEGSQVSYLEGCTA 238
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D NQLHAAVVELVALD+A+IKYSTVQNWY GD GKGGIYNFVTKRG C G SKIS
Sbjct: 239 PMFDTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCAGKNSKIS 298
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SK
Sbjct: 299 WTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNKQQADTGTKMIHVGKNTRSTIISK 358
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S N+YRG V + A SRN++QCDS+LIG++ A+T PYI+ +N+ +EHEA
Sbjct: 359 GISAGRSQNSYRGLVRMGPKADGSRNYSQCDSMLIGSDAEANTFPYIQVQNNQTKVEHEA 418
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI ++ LFY QRGI E A++++++GF ++V +LPMEFAVEA +L+ + LEGSVG
Sbjct: 419 STSKIGEDQLFYFAQRGISVEDAVSMMISGFCQDVFNQLPMEFAVEADRLLSLKLEGSVG 478
>gi|94496619|ref|ZP_01303195.1| FeS assembly protein SufB [Sphingomonas sp. SKA58]
gi|94423979|gb|EAT09004.1| FeS assembly protein SufB [Sphingomonas sp. SKA58]
Length = 494
Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats.
Identities = 339/494 (68%), Positives = 401/494 (81%), Gaps = 5/494 (1%)
Query: 1 MVAVRETVDKVRKIDVDQ----YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M T+ ++ + Y++G+ + I+ D APKGLNED +RFISAKK EP W+L+
Sbjct: 1 MTDDVTTIRNQEALEAAERASTYEHGWSSAIEQDFAPKGLNEDTVRFISAKKGEPQWLLD 60
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
WRL A+ +W TM+ P WA++ P ID+ D YYYA PK SLD+VDPE+L TY+KLG
Sbjct: 61 WRLKAFAQWQTMESPDWAKLNVPPIDYQDAYYYAEPKKKAELNSLDEVDPEILATYQKLG 120
Query: 117 IPIREQEILAGVQTS-KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IPI EQE+LAGV+ S KVAVDAVFDSVSV TTF++EL+++GVIF ISEA+ E PDLVKK
Sbjct: 121 IPIAEQEMLAGVKGSRKVAVDAVFDSVSVATTFRKELEEAGVIFRSISEAVREFPDLVKK 180
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
+L VVP+ DN++A LN AVF+DG+FVYIPKGVRCPMELSTYFRIN + TGQFERTLI+A
Sbjct: 181 WLGKVVPMHDNYFATLNCAVFSDGTFVYIPKGVRCPMELSTYFRINAENTGQFERTLIVA 240
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DEGSYVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFV
Sbjct: 241 DEGSYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFV 300
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR C+G SK+SWTQ+ETGSAITWKYPSC+L GE S GEFYS+A++N QQ D+GTKM
Sbjct: 301 TKRALCQGRNSKVSWTQVETGSAITWKYPSCVLNGENSVGEFYSVALTNNRQQADTGTKM 360
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+H K T S IVSKGISAG SNNTYRG V V GA RNFTQCDSLL+G+ CGAHT+PY
Sbjct: 361 IHNGKGTRSTIVSKGISAGRSNNTYRGLVRVAPGAEGVRNFTQCDSLLLGDQCGAHTVPY 420
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE +N S +EHEATTSKISD+ LFY +QRG+ E+A++LIVNGF ++VLQ+LPMEFAVE
Sbjct: 421 IEVRNPSAQIEHEATTSKISDDQLFYAMQRGLDTESAVSLIVNGFAKDVLQQLPMEFAVE 480
Query: 476 AQKLIDISLEGSVG 489
AQKL+ ISLEGSVG
Sbjct: 481 AQKLLGISLEGSVG 494
>gi|85375384|ref|YP_459446.1| cysteine desulfurase activator complex subunit SufB [Erythrobacter
litoralis HTCC2594]
gi|84788467|gb|ABC64649.1| ABC-type transport system [Erythrobacter litoralis HTCC2594]
Length = 493
Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats.
Identities = 332/473 (70%), Positives = 398/473 (84%), Gaps = 1/473 (0%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
Y++G+ ++I+ D APKGLNED +RFIS KK EP WML+WRL A+R W TM++P WA++
Sbjct: 21 DYEHGWSSDIEQDFAPKGLNEDTVRFISEKKGEPQWMLDWRLKAFRLWQTMEEPDWAKLG 80
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT-SKVAVD 136
YP ID+ D YYYA P +SLD++DP + Y+KLGIP+ EQE+LAGV+ KVAVD
Sbjct: 81 YPKIDYQDAYYYAEPTKKPELESLDELDPAIKEVYDKLGIPLGEQEVLAGVKGARKVAVD 140
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
AVFDSVSV TTF+EELKK+GVIF+ ISEAI EHP+LVKK+L VVP DN++A LN AVF
Sbjct: 141 AVFDSVSVATTFREELKKAGVIFLSISEAIREHPELVKKWLGKVVPQRDNYFATLNCAVF 200
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+DG+FVYIP+GVRCPMELSTYFRIN + TGQFERTLI+A++GSYVSYLEGCTAP RDENQ
Sbjct: 201 SDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQ 260
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVELVA+++AEIKYSTVQNWYPGD++GKGGIYNFVTKRG C+G RSKISWTQ+ETG
Sbjct: 261 LHAAVVELVAMEDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGLCQGARSKISWTQVETG 320
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
SA+TWKYPSC+L GE S GEFYS+A++N +QQ D+GTKM+H A T S I+SKGISAG S
Sbjct: 321 SAVTWKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMIHNAPGTRSTIISKGISAGKS 380
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
NNTYRG V V A + RN T+CDSLLIG+ CGAHT+PYIE KN S +EHEATTSK+SD
Sbjct: 381 NNTYRGLVRVGPNAENVRNRTECDSLLIGDLCGAHTVPYIEVKNPSAQIEHEATTSKVSD 440
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ LFY +QRG+ EE A+ALIVNGF +EVL++LPMEFAVEAQKL+ ISLEGSVG
Sbjct: 441 DQLFYAMQRGLDEEQAMALIVNGFAKEVLKELPMEFAVEAQKLLAISLEGSVG 493
>gi|307152984|ref|YP_003888368.1| FeS assembly protein SufB [Cyanothece sp. PCC 7822]
gi|306983212|gb|ADN15093.1| FeS assembly protein SufB [Cyanothece sp. PCC 7822]
Length = 480
Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats.
Identities = 312/490 (63%), Positives = 390/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ + P+GLNEDIIR ISAKKNEP++MLE+RL
Sbjct: 1 MSAT-----TVKTLVNQPYKYGFVTDIESETVPRGLNEDIIRLISAKKNEPEFMLEFRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AYR+W M +P+W + YP ID+ ++ YY+APK +SL++VDP LL T+EKLGIP+
Sbjct: 56 AYRQWQKMTEPTWPHVDYPPIDYQNIIYYSAPKQKKAKLESLEEVDPALLETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDA+FDSVS+ TTFKE+L K GVIF ISEA+ EHP+LV+KYL +
Sbjct: 116 SEQKRLS-----NVAVDAIFDSVSIATTFKEKLAKEGVIFCSISEALQEHPELVQKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++AALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 171 VVPVNDNYFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNW+ GD+ GKGGI+NFVTKRG
Sbjct: 231 SVSYLEGCTAPMYDTNQLHAAVVELVALDNADIKYSTVQNWFAGDANGKGGIFNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHVG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V + GA +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 KNTRSTIISKGISAGNSKNSYRGLVKMGPGAKGARNYSQCDSMLIGDNAEANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGI EE AI+++V+GF ++VL LPMEFA EA KL
Sbjct: 411 NNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAISMLVSGFCKDVLSALPMEFAAEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|114768832|ref|ZP_01446458.1| FeS assembly protein SufB [alpha proteobacterium HTCC2255]
gi|114549749|gb|EAU52630.1| FeS assembly protein SufB [alpha proteobacterium HTCC2255]
Length = 501
Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats.
Identities = 345/490 (70%), Positives = 411/490 (83%), Gaps = 7/490 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
ETV+ V+ + +YKYGF T+++++ AP GL+EDI+R IS K +EP+WMLEWRL A+ RW
Sbjct: 13 ETVEAVKSL-SGKYKYGFSTDVEIEYAPLGLSEDIVRLISEKNDEPEWMLEWRLQAFERW 71
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSI--VGPQSLDDVDPELLRTYEKLGIPIREQE 123
MK+P WA + YP IDF D+YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 72 KQMKEPDWAMVDYPKIDFQDIYYYARPKSMSEDKPKSLDEVDPKLLETYEKLGIPLKEQA 131
Query: 124 ILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+LAGV+ KVAVDAVFDSVSV TTF++ELK +GVIFM ISEA+ EHPDLVKKY+ +
Sbjct: 132 LLAGVEVPDGDRKVAVDAVFDSVSVGTTFQKELKNAGVIFMSISEALKEHPDLVKKYIGS 191
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNFYA LNSAVF+DGSFVYIP+GV+CPMELSTYFRIN + TGQFERTLIIA++GS
Sbjct: 192 VVPQSDNFYATLNSAVFSDGSFVYIPEGVKCPMELSTYFRINAENTGQFERTLIIAEKGS 251
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAPQRD QLHAAVVELV ++AEIKYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 252 SVSYLEGCTAPQRDVAQLHAAVVELVIQEDAEIKYSTVQNWYPGDENGKGGIYNFVTKRA 311
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTKM+HL
Sbjct: 312 DCRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMIHLG 371
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRIVSKGISAG + NTYRG VS+H A ++RN+TQCDSLLIG+ CGAHT+PYIE K
Sbjct: 372 KNTKSRIVSKGISAGKAQNTYRGLVSMHPKAENARNYTQCDSLLIGDKCGAHTVPYIEVK 431
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF +EVLQ LPMEFA+EAQ L
Sbjct: 432 NNTARVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKEVLQALPMEFAMEAQAL 491
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 492 VAISLEGSVG 501
>gi|254413199|ref|ZP_05026970.1| FeS assembly protein SufB [Microcoleus chthonoplastes PCC 7420]
gi|196179819|gb|EDX74812.1| FeS assembly protein SufB [Microcoleus chthonoplastes PCC 7420]
Length = 479
Score = 565 bits (1455), Expect = e-159, Method: Composition-based stats.
Identities = 310/481 (64%), Positives = 390/481 (81%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V+K+ YKYGF T+I+ D P+GL+ED++R ISAKKNEP++MLE+RL AYR+WL M+
Sbjct: 4 TVKKLVNQPYKYGFVTDIEADTIPRGLSEDVVRLISAKKNEPEFMLEFRLKAYRQWLKME 63
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+P+W + YP I++ D+ YY+APK SL++VDP LL T+EKLGIP+ EQ+ L+
Sbjct: 64 EPTWPHVNYPPINYQDIIYYSAPKKKTEKLNSLEEVDPALLETFEKLGIPLSEQKRLS-- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDA+FDSVSV TTFK++L ++GVIF ISEA+ EHP+LV+KYL +VVPVGDN++
Sbjct: 122 ---NVAVDAIFDSVSVATTFKDKLAEAGVIFCSISEALQEHPELVQKYLGSVVPVGDNYF 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLI+A+EGS VSYLEGCT
Sbjct: 179 AALNSAVFSDGSFVFIPKGVKCPMELSTYFRINTGDTGQFERTLIVAEEGSSVSYLEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D NQLHAAVVELV LDNAEIKYSTVQNW+ GD +GKGGIYNFVTKRG C+G+ SKI
Sbjct: 239 APMYDTNQLHAAVVELVTLDNAEIKYSTVQNWFAGDEKGKGGIYNFVTKRGLCKGVNSKI 298
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+S
Sbjct: 299 SWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNMQQADTGTKMVHIGKNTRSTIIS 358
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG V V A SRN++QCDS+LIG+ A+T PYI+ +N++ +EHE
Sbjct: 359 KGISAGNSKNSYRGLVKVSPKAKRSRNYSQCDSMLIGDTAEANTFPYIQVENNTAKVEHE 418
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI ++ LFY QRGI EE A+++IV+GF ++V +LPMEFA EA KL+ + LEG+V
Sbjct: 419 ASTSKIGEDQLFYFTQRGISEEDAVSMIVSGFCQDVFNELPMEFAAEADKLLSLKLEGAV 478
Query: 489 G 489
G
Sbjct: 479 G 479
>gi|220916007|ref|YP_002491311.1| FeS assembly protein SufB [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953861|gb|ACL64245.1| FeS assembly protein SufB [Anaeromyxobacter dehalogenans 2CP-1]
Length = 479
Score = 565 bits (1455), Expect = e-159, Method: Composition-based stats.
Identities = 320/484 (66%), Positives = 400/484 (82%), Gaps = 6/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T ++++++ +Y+YGF T+I+ DK PKGL+ED+IR ISAKK EP +MLEWRL AYRRW
Sbjct: 2 STAEQLKELTEQKYRYGFVTDIEEDKVPKGLSEDVIRLISAKKGEPRFMLEWRLEAYRRW 61
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L M++P+WA + YP ID+ D+ YY+APK S+D+VDPEL R + KLGIP+ EQ L
Sbjct: 62 LAMEEPTWANVHYPKIDYQDIVYYSAPKQKKALGSMDEVDPELKRAFAKLGIPLEEQMRL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG VAVDAVFDSVSV TT+K++L G++F SEA+ EHP+LV++YL +VVP D
Sbjct: 122 AG-----VAVDAVFDSVSVATTYKKKLADLGIVFCSFSEAVREHPELVERYLGSVVPSTD 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N++AALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN K TGQFERTLI+ADEG YVSYLE
Sbjct: 177 NYFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTLIVADEGGYVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP RDENQLHAAVVELVALD A +KYSTVQNWYPGD++G+GGI+NFVTKRG +
Sbjct: 237 GCTAPMRDENQLHAAVVELVALDGAHVKYSTVQNWYPGDAEGRGGIFNFVTKRGKAM-RK 295
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+KISWTQ+ETGSAITWKYPSC+L+G++S GEFYS+A++N QQ D+GTKM+H+ ++T S
Sbjct: 296 AKISWTQVETGSAITWKYPSCILQGDESVGEFYSVALTNHRQQADTGTKMIHIGRDTRST 355
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I+SKGISAG NTYRG V + +GA +RN++QCDSLLIG+ CGAHT PYIE +N + +
Sbjct: 356 IISKGISAGRGQNTYRGLVKMMKGATGARNYSQCDSLLIGDRCGAHTFPYIEVRNPTAKV 415
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEATTSKISD+ LFYC QRGI +E A+++IVNGF ++VL++LPMEFAVEAQKL+ +SLE
Sbjct: 416 EHEATTSKISDDQLFYCRQRGISDEDAVSMIVNGFAKQVLKELPMEFAVEAQKLLGMSLE 475
Query: 486 GSVG 489
GSVG
Sbjct: 476 GSVG 479
>gi|86157270|ref|YP_464055.1| cysteine desulfurase activator complex subunit SufB
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85773781|gb|ABC80618.1| Iron-regulated ABC transporter membrane component SufB
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 479
Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats.
Identities = 321/484 (66%), Positives = 401/484 (82%), Gaps = 6/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T ++++++ +Y+YGF T+I+ DK PKGL+ED+IR ISAKK EP +MLEWRL AYRRW
Sbjct: 2 STAEQLKELTEQKYRYGFVTDIEEDKVPKGLSEDVIRLISAKKGEPRFMLEWRLEAYRRW 61
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L M++P+WA + YP ID+ ++ YY+APK S+D+VDPEL R + KLGIP+ EQ L
Sbjct: 62 LAMEEPTWANVHYPKIDYQEIVYYSAPKQKKALGSMDEVDPELKRAFAKLGIPLEEQMRL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG VAVDAVFDSVSV TT+K++L G++F SEA+ EHP+LV+KYL +VVP D
Sbjct: 122 AG-----VAVDAVFDSVSVATTYKKKLADLGIVFCSFSEAVREHPELVEKYLGSVVPATD 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N++AALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN K TGQFERTLI+ADEG+YVSYLE
Sbjct: 177 NYFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTLIVADEGAYVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP RDENQLHAAVVELVALD A +KYSTVQNWYPGD++G+GGIYNFVTKRG +
Sbjct: 237 GCTAPMRDENQLHAAVVELVALDGAHVKYSTVQNWYPGDAEGRGGIYNFVTKRGKAM-RK 295
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+KISWTQ+ETGSAITWKYPSC+L+G++S GEFYS+A++N QQ D+GTKM+H+ ++T S
Sbjct: 296 AKISWTQVETGSAITWKYPSCILQGDESVGEFYSVALTNHRQQADTGTKMIHIGRDTRST 355
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I+SKGISAG NTYRG V + +GA +RN++QCDSLLIG+ CGAHT PYIE +N + +
Sbjct: 356 IISKGISAGRGQNTYRGLVKMMKGATGARNYSQCDSLLIGDRCGAHTFPYIEVRNPTAKV 415
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEATTSKISD+ LFYC QRGI +E A+++IVNGF ++VL++LPMEFAVEAQKL+ +SLE
Sbjct: 416 EHEATTSKISDDQLFYCRQRGISDEDAVSMIVNGFAKQVLKELPMEFAVEAQKLLGMSLE 475
Query: 486 GSVG 489
GSVG
Sbjct: 476 GSVG 479
>gi|332186195|ref|ZP_08387940.1| feS assembly protein SufB [Sphingomonas sp. S17]
gi|332013563|gb|EGI55623.1| feS assembly protein SufB [Sphingomonas sp. S17]
Length = 487
Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats.
Identities = 335/475 (70%), Positives = 397/475 (83%), Gaps = 1/475 (0%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+Y++GF T I+ D APKGL+ED +R+ISAKK EP+WML+WRL A+R W T++ P WA+
Sbjct: 13 NKKYEWGFATEIEQDFAPKGLSEDTVRYISAKKGEPEWMLDWRLKAFRLWQTLETPDWAK 72
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT-SKVA 134
+ P ID+ D YYYA PK SLD++DPE+ RTYEKLGIPI EQE+LAGV+ KVA
Sbjct: 73 LNIPPIDYQDAYYYAEPKQKKTIASLDELDPEIRRTYEKLGIPIAEQEVLAGVEGARKVA 132
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
VDAVFDSVSV TTF++EL+ +GVIF ISEAI E+PDLV+K+L VVP DN++A LNSA
Sbjct: 133 VDAVFDSVSVATTFRKELEAAGVIFRSISEAIKEYPDLVRKWLGKVVPQRDNYFATLNSA 192
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
VF+DG+FVYIP+GVRCPMELSTYFRIN + TGQFERTLI+AD+G+YVSYLEGCTAP RDE
Sbjct: 193 VFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVADKGAYVSYLEGCTAPMRDE 252
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
NQLHAAVVELVALD+AEIKYSTVQNWYPGD G GGIYNFVTKR C+G SK+SWTQ+E
Sbjct: 253 NQLHAAVVELVALDDAEIKYSTVQNWYPGDENGVGGIYNFVTKRALCQGKNSKVSWTQVE 312
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
TGSA+TWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+HL KNT S IVSKGISAG
Sbjct: 313 TGSAVTWKYPSCVLAGDGSVGEFYSVAVTNNRQQADTGTKMIHLGKNTRSTIVSKGISAG 372
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
S+NTYRG V V A + RNFTQCDSLL+G+ CGAHT+PYIE KN S +EHEATTSKI
Sbjct: 373 RSDNTYRGLVRVAATAENVRNFTQCDSLLLGDQCGAHTVPYIEVKNPSAQIEHEATTSKI 432
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ +EAA+ALIVNGF REVLQ+LPMEFAVEAQKL+ ISLEGSVG
Sbjct: 433 SEDQLFYAMSRGLDQEAAVALIVNGFAREVLQQLPMEFAVEAQKLLGISLEGSVG 487
>gi|303276547|ref|XP_003057567.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226460224|gb|EEH57518.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 561
Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats.
Identities = 302/487 (62%), Positives = 386/487 (79%), Gaps = 5/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A +E VDK++++ YK GF+T+I+ D PKGL+ED +R ISAKKNEP+WMLE+RL A+
Sbjct: 80 AKQEEVDKIQQMLSKPYKPGFKTDIETDTIPKGLSEDTVRIISAKKNEPEWMLEFRLKAF 139
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R+WLTM++P W+ RYP ID+ + YY+APK + +SLD+VDPELL+T++KLGIP+ EQ
Sbjct: 140 RKWLTMEEPDWSDNRYPDIDYQAVSYYSAPKVMEKKKSLDEVDPELLKTFDKLGIPLSEQ 199
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ + + VAVDAVFDSVS+ TTF+E+L K GVIF ISEAI E+P+L+K++L +VVP
Sbjct: 200 KRM-----TNVAVDAVFDSVSIATTFREDLAKVGVIFCSISEAIREYPELIKQHLGSVVP 254
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN+++ALN+AVF+DGSF YIPKGV+ PMELSTYFRIN + +GQFERTLI+A+EGSYVS
Sbjct: 255 VGDNYFSALNAAVFSDGSFCYIPKGVKSPMELSTYFRINAESSGQFERTLIVAEEGSYVS 314
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP DENQLHAAVVE+ A +AE+KYSTVQNWY G+ G GGIYNFVTKRG C+
Sbjct: 315 YLEGCTAPAYDENQLHAAVVEISAAKDAEVKYSTVQNWYAGNEDGVGGIYNFVTKRGLCK 374
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGS+ITWKYPS +L G+ S GEF+S+A++N QQ D+GTKM+H+ KNT
Sbjct: 375 GDNSKISWTQVETGSSITWKYPSVVLAGDNSVGEFFSVALTNNKQQADTGTKMIHVGKNT 434
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
SRIVSKGISAG S N YRG V V A +RN++QCDS+LIG+ GA+T PYI + S
Sbjct: 435 RSRIVSKGISAGKSRNCYRGLVQVSPSAVGARNYSQCDSMLIGDKAGANTYPYISVREPS 494
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKI ++ LFY QRGI E A+ +I++GF EV +LP+EFA E L+ +
Sbjct: 495 ARVEHEASTSKIGEDQLFYFQQRGIDPETAVGIIISGFCNEVFNELPLEFAAEVNALMSL 554
Query: 483 SLEGSVG 489
LEGSVG
Sbjct: 555 KLEGSVG 561
>gi|67924846|ref|ZP_00518242.1| FeS assembly protein SufB [Crocosphaera watsonii WH 8501]
gi|67853305|gb|EAM48668.1| FeS assembly protein SufB [Crocosphaera watsonii WH 8501]
Length = 480
Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats.
Identities = 312/490 (63%), Positives = 391/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ + P+GL+ED+IR ISAKKNEP++MLE+RL
Sbjct: 1 MSAT-----TVKNLVNQPYKYGFVTDIETETIPRGLSEDVIRLISAKKNEPEFMLEFRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AY++WL M +P+W + YP ID+ ++ YY+APK +SLDDVDP L+ T+EKLGIP+
Sbjct: 56 AYKQWLKMTEPTWPHVHYPKIDYQNIIYYSAPKQKKEKLKSLDDVDPTLIETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDA+FDSVSV TTFKE+L + GVIF ISEA+ EHP+LV+KYL +
Sbjct: 116 SEQKRLS-----NVAVDAIFDSVSVATTFKEKLAEDGVIFCSISEALEEHPELVRKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+AALNSAVF+DGSF++IPKGV+CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 171 VVPVADNFFAALNSAVFSDGSFIFIPKGVKCPMELSTYFRINTGDTGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNWY GD +GKGGIYNFVTKRG
Sbjct: 231 SVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDEKGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+HL
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLAGDNSVGEFYSIALTNNMQQADTGTKMIHLG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V + A +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 KNTRSTIISKGISAGNSKNSYRGLVQMGPRAKGARNYSQCDSMLIGDNAEANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGI EE A++++V+GF ++VL +LPMEFA EA KL
Sbjct: 411 NNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLSELPMEFASEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|254491515|ref|ZP_05104694.1| FeS assembly protein SufB [Methylophaga thiooxidans DMS010]
gi|224462993|gb|EEF79263.1| FeS assembly protein SufB [Methylophaga thiooxydans DMS010]
Length = 482
Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats.
Identities = 330/487 (67%), Positives = 397/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + ++ I +YK GF T+I+VD P GL+ED++R IS KNEP+WMLEWRL AYR
Sbjct: 1 MTDQSQQLESITQKEYKAGFVTDIEVDSLPPGLSEDVVRQISMIKNEPEWMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM P WA + YP ID+ ++ YY+APK GP+SLD+VDPELL+TYEKLG+P+ E+
Sbjct: 61 HWLTMDTPEWAHVHYPEIDYQEVSYYSAPKKKTDGPKSLDEVDPELLKTYEKLGVPLDER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TFK++L + G++FMPISEAI EHP+LVKKY+ +VVP
Sbjct: 121 ARLAG-----VAVDAVFDSVSVSNTFKDKLAEEGILFMPISEAIQEHPELVKKYIGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIAD+ +YVS
Sbjct: 176 HKDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIADDDAYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVA+D AEIKYSTVQNWYPGD GKGGIYNFVTKR CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVAMDRAEIKYSTVQNWYPGDENGKGGIYNFVTKRAACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SK+SWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N QQ D+GTKM+HL KNT
Sbjct: 296 GESSKVSWTQVETGSAITWKYPSVVLQGDNSIGEFYSVAVTNNMQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I+SKGISAG S N YRG V V A ++RN+T+CDSLL+G+ CGAHT PYIE KN +
Sbjct: 356 SSTIISKGISAGRSQNAYRGLVRVGPNADNARNYTECDSLLMGDTCGAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKIS++ LFYC QRG+ E A+++IVNGF ++V+++LPMEFAVEAQ L+ +
Sbjct: 416 AKVEHEASTSKISEDQLFYCKQRGLDTEDAVSMIVNGFCKQVIRELPMEFAVEAQNLLGL 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|197121303|ref|YP_002133254.1| cysteine desulfurase activator complex subunit SufB
[Anaeromyxobacter sp. K]
gi|196171152|gb|ACG72125.1| FeS assembly protein SufB [Anaeromyxobacter sp. K]
Length = 479
Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats.
Identities = 319/484 (65%), Positives = 401/484 (82%), Gaps = 6/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T ++++++ +Y+YGF T+I+ DK PKGL+ED+IR ISAKK EP +MLEWRL AYRRW
Sbjct: 2 STAEQLKELTEQKYRYGFVTDIEEDKVPKGLSEDVIRLISAKKAEPRFMLEWRLEAYRRW 61
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L M++P+WA + YP ID+ D+ YY+APK S+D+VDPEL R + KLGIP+ EQ L
Sbjct: 62 LAMEEPTWANVHYPKIDYQDIVYYSAPKQKKALGSMDEVDPELKRAFAKLGIPLEEQMRL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG VAVDAVFDSVSV TT+K++L G++F SEA+ EHP+LV++YL +VVP D
Sbjct: 122 AG-----VAVDAVFDSVSVATTYKKKLADLGIVFCSFSEAVREHPELVERYLGSVVPSTD 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N++AALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN K TGQFERTLI+ADEG+YVSYLE
Sbjct: 177 NYFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAKDTGQFERTLIVADEGAYVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP RDENQLHAAVVELVALD A +KYSTVQNWYPGD++G+GGI+NFVTKRG +
Sbjct: 237 GCTAPMRDENQLHAAVVELVALDGAHVKYSTVQNWYPGDAEGRGGIFNFVTKRGKAM-RK 295
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+KISWTQ+ETGSAITWKYPSC+L+G++S GEFYS+A++N QQ D+GTKM+H+ ++T S
Sbjct: 296 AKISWTQVETGSAITWKYPSCILQGDESVGEFYSVALTNHRQQADTGTKMIHIGRDTRST 355
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I+SKGISAG NTYRG V + +GA +RN++QCDSLLIG+ CGAHT PYIE +N + +
Sbjct: 356 IISKGISAGRGQNTYRGLVKMMKGATGARNYSQCDSLLIGDRCGAHTFPYIEVRNPTAKV 415
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEATTSKIS++ LFYC QRGI +E A+++IVNGF ++VL++LPMEFAVEAQKL+ +SLE
Sbjct: 416 EHEATTSKISEDQLFYCRQRGISDEDAVSMIVNGFAKQVLKELPMEFAVEAQKLLGMSLE 475
Query: 486 GSVG 489
GSVG
Sbjct: 476 GSVG 479
>gi|119493191|ref|ZP_01624066.1| ABC transporter subunit [Lyngbya sp. PCC 8106]
gi|119452756|gb|EAW33933.1| ABC transporter subunit [Lyngbya sp. PCC 8106]
Length = 478
Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats.
Identities = 309/479 (64%), Positives = 386/479 (80%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + + YKYGF T+I+ D P GLNED++R ISAKKNEP++ML +RL AYR+WL M +
Sbjct: 5 VKTLVNEPYKYGFVTDIESDSIPAGLNEDVVRLISAKKNEPEFMLNFRLKAYRQWLKMSE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+W + YPAI++ ++ YY+APK SLD+VDP LL T+EKLGI + EQ+ LA
Sbjct: 65 PTWPHVNYPAINYQNIVYYSAPKVNEKKGSLDEVDPTLLETFEKLGISLSEQKRLA---- 120
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVS+ TTFKE+L + GVIF ISEA+ EHP+L++KYL +VVPVGDNF+AA
Sbjct: 121 -NVAVDAVFDSVSIGTTFKEKLAEDGVIFCSISEAVKEHPELIEKYLGSVVPVGDNFFAA 179
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV+CPM+LSTYFRIN +GQFERTLI+A+EGS V+YLEGCTAP
Sbjct: 180 LNSAVFSDGSFVYIPKGVKCPMDLSTYFRINNGDSGQFERTLIVAEEGSSVTYLEGCTAP 239
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVELV LDNAEIKYSTVQNW+ GD GKGGIYNFVTKRG C+G+ SKISW
Sbjct: 240 MFDTNQLHAAVVELVTLDNAEIKYSTVQNWFAGDENGKGGIYNFVTKRGLCKGVNSKISW 299
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SKG
Sbjct: 300 TQVETGSAITWKYPSCILIGDNSVGEFYSVALTNNMQQADTGTKMVHIGKNTRSTIISKG 359
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI+ N++ +EHEA+
Sbjct: 360 ISAGNSSNSYRGLVKIGPKAKGARNYSQCDSMLIGDRGQANTFPYIQVDNNTAKVEHEAS 419
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFY QRGI EE A++LI++GF ++V +LPMEFAVEA KL+ + LEGSVG
Sbjct: 420 TSKIGEDQLFYLTQRGISEEDAVSLIISGFCKDVFNELPMEFAVEADKLLSLKLEGSVG 478
>gi|86608874|ref|YP_477636.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86557416|gb|ABD02373.1| FeS assembly protein SufB [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 478
Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats.
Identities = 314/479 (65%), Positives = 384/479 (80%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
VR + YKYGF T+I + KGLNE++IR I AKK EPD+MLE+RL AYR+WL M +
Sbjct: 5 VRALVNQPYKYGFVTDIPSESIGKGLNEEVIRQIWAKKGEPDFMLEFRLRAYRQWLKMSE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+W + YP ID+ ++ YY+APK +SLD+VDP LL T+EKLGIP+ EQ+ LA
Sbjct: 65 PTWPNVSYPPIDYQNIVYYSAPKVQPKKKSLDEVDPVLLETFEKLGIPLSEQKRLA---- 120
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDA+FDSVSV TTF+E+L K GVIF +SEA+ E+P+LV+KYL +VVP+ DN+YAA
Sbjct: 121 -NVAVDAIFDSVSVATTFREKLAKEGVIFCSMSEALREYPELVRKYLGSVVPIADNYYAA 179
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVY+PKGVRCPMELSTYFRIN +GQFERTLIIADEGSYVSYLEGCTAP
Sbjct: 180 LNSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTLIIADEGSYVSYLEGCTAP 239
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVEL+ LDNAEIKYSTVQNWY GD GKGGIYNFVTKRG C+G SKISW
Sbjct: 240 MFDTNQLHAAVVELIVLDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGANSKISW 299
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L GE S GEFYS+A++N +QQ D+GTKM+H+ +NT S+I+SKG
Sbjct: 300 TQVETGSAITWKYPSCVLVGENSVGEFYSVALTNNYQQADTGTKMIHVGRNTRSKIISKG 359
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A +RNF+QCDS+LIG+ C A+T PYIE +N++ +EHEA+
Sbjct: 360 ISAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSANTFPYIEVQNNTAKVEHEAS 419
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI +E LFY RGI E A+++I++GF REV +LPMEFAVEA +L+ + LEGSVG
Sbjct: 420 TSKIGEEQLFYFQSRGISAEDAVSMIISGFCREVFNQLPMEFAVEADRLLSLKLEGSVG 478
>gi|292490816|ref|YP_003526255.1| FeS assembly protein SufB [Nitrosococcus halophilus Nc4]
gi|291579411|gb|ADE13868.1| FeS assembly protein SufB [Nitrosococcus halophilus Nc4]
Length = 482
Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats.
Identities = 328/487 (67%), Positives = 399/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ KV + +Y+ GF T+I+ D P GLNED+IR IS+KKNEP++MLEWRL AYR
Sbjct: 1 MSKSPLKVENLVHQEYRAGFITDIEADAIPPGLNEDVIRLISSKKNEPEFMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WL MK+P WA + YP +D+ + YY+APKS GP+SLD+VDP+LL TYEKLG+P+ E+
Sbjct: 61 HWLEMKEPKWAHVHYPPVDYQSIVYYSAPKSKKDGPKSLDEVDPKLLETYEKLGVPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTFKE+L ++GVIF SEA+ ++P+LV+KYL TVVP
Sbjct: 121 ARLAG-----VAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKYPELVEKYLGTVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+PKGVRCP+ELSTYFRIN TGQFERTLI+ADEG++VS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYVPKGVRCPLELSTYFRINAAQTGQFERTLIVADEGAHVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVALDNAEIKYSTVQNWYPGD +G+GGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDEEGRGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ +NT
Sbjct: 296 GANSKISWTQVETGSAITWKYPSVILQGDHSVGEFYSVALTNNFQQADTGTKMIHMGRNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG N YRG V + A +RN+TQCDSLL+G+ CGAHT PYIE K+ S
Sbjct: 356 RSTIISKGISAGRGQNAYRGLVRMMPTAVGARNYTQCDSLLLGDRCGAHTFPYIEVKHPS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKIS++ LFYC QRGI E A+++IVNGF +EV ++LPMEFAVEAQ L+ +
Sbjct: 416 AQVEHEASTSKISEDQLFYCKQRGISAEDAVSMIVNGFCKEVFKELPMEFAVEAQNLLGV 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|22298033|ref|NP_681280.1| cysteine desulfurase activator complex subunit SufB
[Thermosynechococcus elongatus BP-1]
gi|22294211|dbj|BAC08042.1| ABC transporter subunit [Thermosynechococcus elongatus BP-1]
Length = 478
Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats.
Identities = 317/489 (64%), Positives = 386/489 (78%), Gaps = 11/489 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T I+ + PKGLNEDIIR ISAKKNEP++MLE+RL
Sbjct: 1 MSAT------VQSLVNQPYKYGFVTPIETETIPKGLNEDIIRLISAKKNEPEFMLEFRLR 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR+WL M +P W R+ YP I++ D+ YY+APK +SLD+VDP LL T+EKLGIP+
Sbjct: 55 AYRQWLKMSEPQWPRVSYPPINYQDIVYYSAPKQKEKLKSLDEVDPVLLETFEKLGIPLS 114
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ L + VAVDA+FDSVSV TTF+EEL K G+IF ISEA+ ++P+LV+KYL +V
Sbjct: 115 EQKRL-----TNVAVDAIFDSVSVATTFREELAKQGIIFCSISEALQDYPELVQKYLGSV 169
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP+GDNFYAALNSAVF+DGSFVY+PK RCPMELSTYFRIN +GQFERTLIIAD GSY
Sbjct: 170 VPIGDNFYAALNSAVFSDGSFVYVPKNTRCPMELSTYFRINNGESGQFERTLIIADAGSY 229
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP D NQLHAAVVELVALDNAEIKYSTVQNWY GD GKGGIYNFVTKRG
Sbjct: 230 VSYLEGCTAPMFDTNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGL 289
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C G SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+ K
Sbjct: 290 CLGRNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNHYQQADTGTKMIHIGK 349
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT SRIVSKGISAG S N+YRG V + A +RN++QCDS+LIG+ A+T PYI+ +N
Sbjct: 350 NTRSRIVSKGISAGHSQNSYRGLVKIGPKATGARNYSQCDSMLIGDTAAANTFPYIQVQN 409
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEA+TSKI ++ LFY QRGI E A++++++GF R+V +LPMEFAVEA +L+
Sbjct: 410 PTAQVEHEASTSKIGEDQLFYFAQRGISAEDAVSMMISGFCRDVFNQLPMEFAVEADRLL 469
Query: 481 DISLEGSVG 489
+ LEGSVG
Sbjct: 470 SLKLEGSVG 478
>gi|294013385|ref|YP_003546845.1| Fe-S cluster assembly protein SufB [Sphingobium japonicum UT26S]
gi|292676715|dbj|BAI98233.1| Fe-S cluster assembly protein SufB [Sphingobium japonicum UT26S]
Length = 494
Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats.
Identities = 341/494 (69%), Positives = 403/494 (81%), Gaps = 8/494 (1%)
Query: 4 VRETVDKVRKIDVDQ-------YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
+ E VR ++ + Y++G+ + I+ D APKGLNED +RFISAKK EP+W+LE
Sbjct: 1 MTEEATTVRNLEAHEAAERASAYEHGWSSAIEQDFAPKGLNEDTVRFISAKKKEPEWLLE 60
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
WRL A+ W M+ P WA++ P ID+ D YYYA PK +SLD++DPE+ TYEKLG
Sbjct: 61 WRLKAFAMWQQMESPDWAKLNIPPIDYQDAYYYAEPKKKAELESLDELDPEIRATYEKLG 120
Query: 117 IPIREQEILAGVQTS-KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IPI EQE+LAGV+ S KVAVDAVFDSVSV TTF++EL+++GVIF ISEA+ E+PDLVKK
Sbjct: 121 IPIAEQEVLAGVKNSRKVAVDAVFDSVSVATTFRKELEEAGVIFRSISEAVREYPDLVKK 180
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
+L VVP+ DN++A LN AVF+DG+FVYIPKGVRCPMELSTYFRIN + TGQFERTLI+A
Sbjct: 181 WLGKVVPMHDNYFATLNCAVFSDGTFVYIPKGVRCPMELSTYFRINAENTGQFERTLIVA 240
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DEGSYVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFV
Sbjct: 241 DEGSYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFV 300
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR C+G SK+SWTQ+ETGSAITWKYPSC+L GE S GEFYS+A++N QQ D+GTKM
Sbjct: 301 TKRALCQGRNSKVSWTQVETGSAITWKYPSCVLNGENSVGEFYSVALTNNLQQADTGTKM 360
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+H K + S IVSKGISAG SNNTYRG V V GA RNFTQCDSLL+G+ CGAHT+PY
Sbjct: 361 IHNGKGSRSTIVSKGISAGRSNNTYRGLVRVAPGAEGVRNFTQCDSLLLGDQCGAHTVPY 420
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE +N S +EHEATTSKISD+ LFY +QRG+ +EAA++LIVNGF REVLQ+LPMEFAVE
Sbjct: 421 IEVRNPSAQIEHEATTSKISDDQLFYAMQRGLDQEAAVSLIVNGFAREVLQQLPMEFAVE 480
Query: 476 AQKLIDISLEGSVG 489
AQKL+ ISLEGSVG
Sbjct: 481 AQKLLGISLEGSVG 494
>gi|326801402|ref|YP_004319221.1| FeS assembly protein SufB [Sphingobacterium sp. 21]
gi|326552166|gb|ADZ80551.1| FeS assembly protein SufB [Sphingobacterium sp. 21]
Length = 483
Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats.
Identities = 329/489 (67%), Positives = 394/489 (80%), Gaps = 6/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + ++++ V++YKYGF TNI++D A KGL+E+ +RFISAKK EP W+L+WRL
Sbjct: 1 MSTKDDNI--LQELAVEEYKYGFTTNIEMDIAKKGLSEETVRFISAKKGEPAWLLDWRLK 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A R + M P W +P +DF D+ YYAAPK S+D+VDPELL T+ KLGIP+
Sbjct: 59 ALRHFEKMTMPKWQNFEHPKVDFQDISYYAAPKEKPKVNSMDEVDPELLDTFAKLGIPLD 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ++LAGV VAVDAVFDSVSV TTF+E+LK+ GVIF EA+ EHPDLVK+YL TV
Sbjct: 119 EQKVLAGV----VAVDAVFDSVSVKTTFREKLKEYGVIFCSFGEAVKEHPDLVKQYLGTV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN YAALN+AVF+DGSFVYIPKGV CPMELSTYFRIN + TGQFERTLIIADEGSY
Sbjct: 175 VPQTDNIYAALNAAVFSDGSFVYIPKGVNCPMELSTYFRINAQNTGQFERTLIIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+AL+NAEIKYSTVQNWYPGD +G+GGIYNFVTKRG
Sbjct: 235 VSYLEGCTAPMRDENQLHAAVVELIALENAEIKYSTVQNWYPGDKEGRGGIYNFVTKRGI 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C+G SKISWTQ+ETGS+ITWKYPS +L+G+ S GEFYS+A++ Q D+G+KM H+ K
Sbjct: 295 CKGDNSKISWTQVETGSSITWKYPSVILKGDNSVGEFYSVALTRNHQIADTGSKMYHIGK 354
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S+IVSKGISAG S N+YRG V + +GA +RNFTQCDSLLIG+ CGAHT PYIE+KN
Sbjct: 355 NTRSKIVSKGISAGVSQNSYRGLVQIGKGAEKARNFTQCDSLLIGDKCGAHTFPYIEAKN 414
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ LEHEATTSKI ++ +FY QRGI E A+ LIVNG+ +EVL +LPMEFAVEAQKL+
Sbjct: 415 KTAKLEHEATTSKIGEDQIFYLTQRGIDPEKAVGLIVNGYAKEVLNQLPMEFAVEAQKLL 474
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 475 AISLEGSVG 483
>gi|312130463|ref|YP_003997803.1| iroN-regulated abc transporter membrane component sufb
[Leadbetterella byssophila DSM 17132]
gi|311907009|gb|ADQ17450.1| Iron-regulated ABC transporter membrane component SufB
[Leadbetterella byssophila DSM 17132]
Length = 481
Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats.
Identities = 330/486 (67%), Positives = 398/486 (81%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + D + +I +YKYGF T+I+ D+AP GL+EDI+RFISAKKNEP+WMLEWRL AYR
Sbjct: 1 MSKDTDILEEITSSEYKYGFYTDIEADEAPPGLSEDIVRFISAKKNEPEWMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W M +P+WA + Y DF + YY+APK SLD+VDPEL +T+EKLGI + EQ+
Sbjct: 61 EWEKMTEPNWANVTYEKPDFQAIKYYSAPKQQKKLNSLDEVDPELRKTFEKLGISLSEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
++G VAVDAV DSVSV TTF+ EL + G+IF ISEAI E+PDLVKKYL +VVPV
Sbjct: 121 RISG-----VAVDAVIDSVSVATTFRAELAEKGIIFCSISEAIKEYPDLVKKYLGSVVPV 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNFY+ALNSAVF+DGSF YIPKGVRCPMELSTYFRIN GTGQFERTLIIADEG+YVSY
Sbjct: 176 KDNFYSALNSAVFSDGSFCYIPKGVRCPMELSTYFRINAAGTGQFERTLIIADEGAYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVE+ A +NAE+KYSTVQNWYPGD +GKGG++NFVTKRG C G
Sbjct: 236 LEGCTAPMRDENQLHAAVVEIFAHENAEVKYSTVQNWYPGDKEGKGGVFNFVTKRGLCFG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
RSKISWTQ+ETGSA+TWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ KNT
Sbjct: 296 DRSKISWTQVETGSAVTWKYPSVILKGDNSIGEFYSVAVTNNFQQADTGTKMIHIGKNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S N+YRG V + + A ++RNF+QCDS+L+G+ CGAHT PYIE N +
Sbjct: 356 SRIVSKGISAGRSQNSYRGLVEISKRADNARNFSQCDSMLLGDRCGAHTFPYIECNNPTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
N+EHEATTSKI ++ LFYC QRGI E A+ALI+NG+ +EVL +LPMEFAVEAQKL+ +S
Sbjct: 416 NVEHEATTSKIGEDQLFYCNQRGIDTETAVALIINGYAKEVLNQLPMEFAVEAQKLLAVS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|85709851|ref|ZP_01040916.1| ABC-type transport system [Erythrobacter sp. NAP1]
gi|85688561|gb|EAQ28565.1| ABC-type transport system [Erythrobacter sp. NAP1]
Length = 495
Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats.
Identities = 330/470 (70%), Positives = 397/470 (84%), Gaps = 1/470 (0%)
Query: 21 YGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPA 80
+G+ ++I+ + A KGL+E+ +RFISAKK EP+WML+WRL A+R W MK+P WA++ YPA
Sbjct: 26 HGWSSDIETEYAEKGLSEETVRFISAKKGEPEWMLDWRLKAFRLWQEMKEPDWAKVGYPA 85
Query: 81 IDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT-SKVAVDAVF 139
ID+ D YYYAAPK +SLD++DPE+ Y+KLGIP+ EQE+LAGV+ KVAVDAVF
Sbjct: 86 IDYQDAYYYAAPKKKPTLKSLDELDPEIKAVYDKLGIPVAEQEVLAGVEGARKVAVDAVF 145
Query: 140 DSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG 199
DSVSV TTF+EELKK+GVIF+ ISEAI E+PDLVKK+L VVP DN++A LNSAVF+DG
Sbjct: 146 DSVSVATTFREELKKAGVIFLSISEAIKEYPDLVKKWLGRVVPQRDNYFACLNSAVFSDG 205
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+FVY+P+GVRCPMELSTYFRIN + TGQFERTLI+A++GSYVSYLEGCTAP RDENQLHA
Sbjct: 206 TFVYVPEGVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQLHA 265
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
AVVELVA+++AEIKYSTVQNWYPG+S+G GGIYNFVTKRG C+G RSKISWTQ+ETGSA+
Sbjct: 266 AVVELVAMEDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGLCQGDRSKISWTQVETGSAV 325
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
TWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H + S I+SKGISAG SNNT
Sbjct: 326 TWKYPSCVLNGKDSVGEFYSVAVTNNHQQADTGTKMIHNGAGSRSTIISKGISAGKSNNT 385
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
YRG V V A RNFTQCDSLL+GN CGAHT+PYIE KN +EHEATTSKISDE L
Sbjct: 386 YRGLVRVGPKAEGVRNFTQCDSLLLGNECGAHTVPYIEVKNPGAQIEHEATTSKISDEQL 445
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
FY +QRG+ EE A+ALIVNGF ++VL++LPMEFAVEAQKL+ ISLEGSVG
Sbjct: 446 FYAMQRGLDEEDAVALIVNGFAKDVLKELPMEFAVEAQKLLAISLEGSVG 495
>gi|218245297|ref|YP_002370668.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 8801]
gi|218165775|gb|ACK64512.1| FeS assembly protein SufB [Cyanothece sp. PCC 8801]
Length = 480
Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats.
Identities = 316/490 (64%), Positives = 387/490 (78%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P+GLNEDIIR ISAKKNEPD+ML +RL
Sbjct: 1 MSATS-----VKTLVNQPYKYGFVTDIETDTIPRGLNEDIIRLISAKKNEPDFMLAFRLR 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AY++W M +P+W + YP ID+ ++ YY+APK SLD+VDP LL T+EKLGIP+
Sbjct: 56 AYQQWQKMTEPTWPHVTYPPIDYQNIIYYSAPKQKKEKLGSLDEVDPTLLETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L VAVDA+FDSVS+ TTFKE+L +SGVIF ISEA+ EHP+LVKKYL T
Sbjct: 116 SEQKRL-----GNVAVDAIFDSVSIATTFKEKLAESGVIFCSISEALQEHPELVKKYLGT 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+AALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 171 VVPVADNFFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAA+VELVALDNAEIKYSTVQNWY GD GKGGIYNFVTKRG
Sbjct: 231 SVSYLEGCTAPMYDSNQLHAAIVELVALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V + A +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 KNTRSTIISKGISAGGSKNSYRGLVKIGPKADGARNYSQCDSMLIGDNAQANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGI EE A++++V+GF ++VL +LPMEFA EA KL
Sbjct: 411 NNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPMEFAAEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|255532928|ref|YP_003093300.1| cysteine desulfurase activator complex subunit SufB [Pedobacter
heparinus DSM 2366]
gi|255345912|gb|ACU05238.1| FeS assembly protein SufB [Pedobacter heparinus DSM 2366]
Length = 481
Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats.
Identities = 327/486 (67%), Positives = 396/486 (81%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++E D + +++YKYGF T I D PKGLNED+IR IS KKNEP+WMLEWRL AY+
Sbjct: 1 MKEQQDAIDHAVLNEYKYGFVTEIDTDAIPKGLNEDVIRLISNKKNEPEWMLEWRLKAYK 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WL+M++P+W ++YP I++ D+ YYAAPK SLD+VDPELL T+EKLGI I EQ+
Sbjct: 61 YWLSMEEPTWPNVKYPPINYQDIIYYAAPKPKKQLNSLDEVDPELLSTFEKLGISISEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G VA+D V DSVS+ T+FKE+L + GVIF ISEAI HP+LVKKYL +VVP+
Sbjct: 121 RLSG-----VAIDVVMDSVSIATSFKEQLSEIGVIFCSISEAIQLHPELVKKYLGSVVPM 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN++AALNSAVFTDGSF +IPKGVRCPMELSTYFRIN + +GQFERTLI+A++ SYVSY
Sbjct: 176 TDNYFAALNSAVFTDGSFCFIPKGVRCPMELSTYFRINTENSGQFERTLIVAEDESYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVEL+A++ AEIKYSTVQNWYPGD GKGGIYNFVTKRG C+G
Sbjct: 236 LEGCTAPMRDENQLHAAVVELIAMEKAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGICKG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A +N QQ D+GTKM+HL KNT
Sbjct: 296 NHSKISWTQVETGSAITWKYPSVILKGDNSIGEFYSVAFTNNHQQADTGTKMIHLGKNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIV+KGISAG S N+YRG V + A ++RN++QCDSLL+G+ CGAHT PYIE KN S
Sbjct: 356 SRIVAKGISAGHSQNSYRGLVRTSKQALNARNYSQCDSLLLGDKCGAHTFPYIEVKNKSA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ LFYC QRGI EAA+ALIVNGF +EV+ +LPMEFA+EAQKL+ IS
Sbjct: 416 IVEHEATTSKIGEDQLFYCRQRGIDPEAAVALIVNGFAKEVMNQLPMEFAIEAQKLLAIS 475
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 476 MEGSVG 481
>gi|218441628|ref|YP_002379957.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 7424]
gi|218174356|gb|ACK73089.1| FeS assembly protein SufB [Cyanothece sp. PCC 7424]
Length = 480
Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats.
Identities = 314/490 (64%), Positives = 389/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ + P+GLNEDIIR ISAKKNEP++ML++RL
Sbjct: 1 MSATS-----VKTLVNQPYKYGFITDIESETVPRGLNEDIIRLISAKKNEPEFMLDFRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AYR+W M +P+W + YP ID+ ++ YY+APK+ SLD+VDP LL T+EKLGIP+
Sbjct: 56 AYRQWQKMTEPTWPHVSYPPIDYQNIIYYSAPKTKKVKLDSLDEVDPALLETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDA+FDSVS+ TTFKE+L + GVIF ISEA+ EHPDLV+KYL +
Sbjct: 116 SEQKRLS-----NVAVDAIFDSVSIATTFKEKLAEEGVIFCSISEALQEHPDLVQKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN++AALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLIIA+EG+
Sbjct: 171 VVPVNDNYFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINNGETGQFERTLIIAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP D NQLHAAVVELV LDNAEIKYSTVQNW+ GD GKGGIYNFVTKRG
Sbjct: 231 YVSYLEGCTAPMYDTNQLHAAVVELVTLDNAEIKYSTVQNWFAGDENGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V + GA +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 KNTRSTIISKGISAGNSKNSYRGLVKMSPGAKGARNYSQCDSMLIGDNAEANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRG+ EE AI+++V+GF ++VL LPMEFA EA KL
Sbjct: 411 NNTAKVEHEASTSKIGEDQLFYFAQRGVSEEDAISMLVSGFCKDVLSALPMEFAAEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|254464031|ref|ZP_05077442.1| FeS assembly protein SufB [Rhodobacterales bacterium Y4I]
gi|206684939|gb|EDZ45421.1| FeS assembly protein SufB [Rhodobacterales bacterium Y4I]
Length = 507
Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats.
Identities = 349/494 (70%), Positives = 411/494 (83%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ET+I+++ APKGL DI+R IS K EP+WML WRL AY R
Sbjct: 15 QETVDAVREVG-GAYKYGWETDIEMEYAPKGLTTDIVRLISEKNEEPEWMLNWRLEAYDR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL ++P+WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WLQKEEPTWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF++ELK++GVIF ISEAI EHP+LVKK
Sbjct: 134 ILAGVEGAGQTPEEGRKVAVDAVFDSVSVGTTFQKELKEAGVIFCSISEAIREHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TVVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGTVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTKM
Sbjct: 314 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 IHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|220908824|ref|YP_002484135.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 7425]
gi|219865435|gb|ACL45774.1| FeS assembly protein SufB [Cyanothece sp. PCC 7425]
Length = 479
Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats.
Identities = 310/480 (64%), Positives = 385/480 (80%), Gaps = 6/480 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + YKYGF T+I+ + P+GLNED+IR ISAKKNEP +ML++RL AYR+WL M +
Sbjct: 5 VKSLVNQPYKYGFVTDIESETIPRGLNEDVIRLISAKKNEPQFMLDFRLKAYRQWLKMTE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P W ++YP I++ D+ YY+APK SL++VDP LL T+EKLGIP+ EQ+ L
Sbjct: 65 PDWPNVKYPPINYQDIVYYSAPKQPKKKLNSLEEVDPVLLETFEKLGIPLSEQKRL---- 120
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDA+FDSVSV TTF+E+L K GVIF ISEA+ E+P+LV+KY+ +VVPVGDN+YA
Sbjct: 121 -GNVAVDAIFDSVSVATTFREKLAKEGVIFCSISEALQEYPELVEKYIGSVVPVGDNYYA 179
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFVYIPK CPMELSTYFRIN +GQFERTLI+A+EGSYVSYLEGCTA
Sbjct: 180 ALNSAVFSDGSFVYIPKNTHCPMELSTYFRINNGESGQFERTLIVAEEGSYVSYLEGCTA 239
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D NQLHAAVVELVALDNAEIKYSTVQNWY GD GKGGIYNFVTKRG C+G SKIS
Sbjct: 240 PMFDTNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGKNSKIS 299
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SK
Sbjct: 300 WTQVETGSAITWKYPSCVLIGDNSVGEFYSVALTNNCQQADTGTKMIHIGKNTRSTIISK 359
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG SNN+YRG V + A +RN++QCDS+LIG+N GA+T PYI+ +N++ +EHEA
Sbjct: 360 GISAGRSNNSYRGLVKMGPKAEGARNYSQCDSMLIGDNAGANTFPYIQVQNNTAKVEHEA 419
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI ++ LFY QRGI E AI+++++GF ++V +LPMEFAVEA +L+ + LEGSVG
Sbjct: 420 STSKIGEDQLFYFAQRGISAEDAISMMISGFCKDVFNQLPMEFAVEADRLLSLKLEGSVG 479
>gi|258593120|emb|CBE69431.1| transport protein associated with Fe-S cluster assembly [NC10
bacterium 'Dutch sediment']
Length = 491
Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats.
Identities = 322/492 (65%), Positives = 393/492 (79%), Gaps = 10/492 (2%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A+ + + +YKYGF T I+ + P GLNE+I+R ISAKK+EPDWML+WRL AY
Sbjct: 5 AMNSRSKAIEALTNQEYKYGFVTEIEEEAVPHGLNEEIVRLISAKKHEPDWMLQWRLKAY 64
Query: 63 RRWLTMK----DPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGI 117
R W ++ +P WA ++YP ID+ + YYAAPK GP+SLD+VDP+LL T+EKLGI
Sbjct: 65 RHWAKLEKSEAEPKWANVKYPPIDYQGIRYYAAPKQKTEGPKSLDEVDPKLLETFEKLGI 124
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P+ E++ L+G+ AVDAVFDSVSV TTFK +L + G+IF SEA+ HPDL++KYL
Sbjct: 125 PLAERKRLSGI-----AVDAVFDSVSVATTFKGKLGELGIIFCSFSEAVQNHPDLIRKYL 179
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+VVP DNF+A LNSAVF+DGSF YIPKGVRCPMELSTYFRIN TGQFERTLIIADE
Sbjct: 180 GSVVPYTDNFFATLNSAVFSDGSFCYIPKGVRCPMELSTYFRINAAETGQFERTLIIADE 239
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+YVSYLEGCTAP RDENQLHAAVVEL+A D+A+IKYSTVQNWYPGD +GKGGIYNFVTK
Sbjct: 240 GAYVSYLEGCTAPMRDENQLHAAVVELIAHDDAQIKYSTVQNWYPGDKEGKGGIYNFVTK 299
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
RG C G R+KISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+H
Sbjct: 300 RGKCLGRRAKISWTQVETGSAITWKYPSCILQGDDSTGEFYSVALTNHYQQADTGTKMIH 359
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L K+T S I+SKGISAG N+YRG V + +GA +RN++QCDSLL+G+ CGAHT PY+E
Sbjct: 360 LGKHTRSTIISKGISAGHGQNSYRGLVKIMKGATGARNYSQCDSLLLGDQCGAHTFPYLE 419
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
N S LEHEA+TSKI ++ LFYC QRGI E A+ LIVNGF + VL++LPMEFAVEAQ
Sbjct: 420 VNNDSSQLEHEASTSKIGEDQLFYCKQRGISAEDAVNLIVNGFCKTVLRELPMEFAVEAQ 479
Query: 478 KLIDISLEGSVG 489
KL+ +SLEGSVG
Sbjct: 480 KLLGVSLEGSVG 491
>gi|302841908|ref|XP_002952498.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
gi|300262137|gb|EFJ46345.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
Length = 535
Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats.
Identities = 312/485 (64%), Positives = 382/485 (78%), Gaps = 5/485 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ ++KI YKYGF+T I+ D PKGLNED++R ISAKK EP+WMLE+RL AYR+
Sbjct: 56 SDEKRDIQKILDRPYKYGFKTIIESDTFPKGLNEDVVRAISAKKGEPEWMLEFRLKAYRK 115
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
WLTM++P W+ YP ID+ D+ YY+ PK +SL++VDPELL+T+EKLGIP+ EQ+
Sbjct: 116 WLTMEEPKWSDNAYPEIDYQDVSYYSEPKVKEKLKSLEEVDPELLKTFEKLGIPLNEQKR 175
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LA VAVDAVFDSVS+ TTFKE+LKK GVIF ISEA+ E+PDLVKKY+ +VVPVG
Sbjct: 176 LA-----NVAVDAVFDSVSIATTFKEDLKKHGVIFCSISEALKEYPDLVKKYMGSVVPVG 230
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN++AALNSAVF+DGSFV++PKGV+CPMELSTYFRIN TGQFERTLI+A+EGSYVSYL
Sbjct: 231 DNYFAALNSAVFSDGSFVFVPKGVKCPMELSTYFRINASETGQFERTLIVAEEGSYVSYL 290
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP D NQLHAAVVEL +AEIKYSTVQNWY GD+ GKGGIYNFVTKRG C G
Sbjct: 291 EGCTAPAYDSNQLHAAVVELYCEKDAEIKYSTVQNWYAGDANGKGGIYNFVTKRGMCAGP 350
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SKISWTQ+ETGS+ITWKYPS +L G+ S GEFYS+A++N QQ D+GTKM+H+ +NT S
Sbjct: 351 NSKISWTQVETGSSITWKYPSVVLAGDNSVGEFYSVALTNNCQQADTGTKMIHVGRNTRS 410
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
RIVSKGISAG S N YRG V V A +RNF+QCDS+LIG+ GA+T PYI+ + S
Sbjct: 411 RIVSKGISAGTSRNCYRGLVQVMPSAKGARNFSQCDSMLIGDRAGANTYPYIQVREPSAV 470
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+EHEA+TSKI ++ LFY QRGI E A+ I++GF REV +LP+EFA E +L+ + L
Sbjct: 471 VEHEASTSKIGEDQLFYFQQRGIDPEKAVGAIISGFCREVFNELPLEFAAEVNELMSLKL 530
Query: 485 EGSVG 489
EG+VG
Sbjct: 531 EGTVG 535
>gi|149185218|ref|ZP_01863535.1| component of SufBCD complex [Erythrobacter sp. SD-21]
gi|148831329|gb|EDL49763.1| component of SufBCD complex [Erythrobacter sp. SD-21]
Length = 493
Score = 562 bits (1447), Expect = e-158, Method: Composition-based stats.
Identities = 332/472 (70%), Positives = 396/472 (83%), Gaps = 1/472 (0%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
Y++G+ ++I+ + A KGL ED +RFISAKKNEP+WML+WRL A+R W M++P WA++ Y
Sbjct: 22 YEHGWSSDIETEFAEKGLTEDTVRFISAKKNEPEWMLDWRLKAFRMWQEMEEPDWAKLGY 81
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT-SKVAVDA 137
P ID+ D YYYAAPK +SLD++DP + TYEKLGIPI EQE+LAGV+ KVAVDA
Sbjct: 82 PEIDYQDAYYYAAPKKKPELESLDELDPAIRETYEKLGIPIAEQEVLAGVKGARKVAVDA 141
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
VFDSVSV TTF+EELKK+GVIF+ ISEAI E+P+LVKK+L VVP DNF+A LN AVF+
Sbjct: 142 VFDSVSVATTFREELKKAGVIFLSISEAIREYPELVKKWLGKVVPQKDNFFATLNCAVFS 201
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
DG+FVY+P+GVRCPMELSTYFRIN + TGQFERTLI+A++GSYVSYLEGCTAP RDENQL
Sbjct: 202 DGTFVYVPEGVRCPMELSTYFRINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQL 261
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKR C+G RSK+SWTQ+ETGS
Sbjct: 262 HAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRALCQGARSKVSWTQVETGS 321
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
A+TWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H K + S I+SKGISAG SN
Sbjct: 322 AVTWKYPSCVLNGQDSVGEFYSVAVTNNYQQADTGTKMVHNGKGSRSTIISKGISAGKSN 381
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
NTYRG V V A RN T+CDSLLIG+ CGAHT+PYIE KN +EHEATTSKISD+
Sbjct: 382 NTYRGLVRVAANADGVRNRTECDSLLIGDECGAHTVPYIEVKNPGAQIEHEATTSKISDD 441
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ +E AIALIVNGF +EVL++LPMEFAVEAQKL+ ISLEGSVG
Sbjct: 442 QLFYAMQRGLDDEEAIALIVNGFAKEVLKELPMEFAVEAQKLLAISLEGSVG 493
>gi|254461529|ref|ZP_05074945.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2083]
gi|206678118|gb|EDZ42605.1| FeS assembly protein SufB [Rhodobacteraceae bacterium HTCC2083]
Length = 511
Score = 562 bits (1447), Expect = e-158, Method: Composition-based stats.
Identities = 357/495 (72%), Positives = 416/495 (84%), Gaps = 11/495 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ T+I+++ APKGLNEDI+R IS+K +EP WMLEWRL AYRR
Sbjct: 18 QETVDAVREVG-GAYKYGWSTDIEMEYAPKGLNEDIVRLISSKNDEPKWMLEWRLEAYRR 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT +P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY KLGIP++EQ
Sbjct: 77 WLTKVEPDWAMVDYPEIDFQDQYYYARPKSMAVKPKSLDEVDPKLLATYAKLGIPLKEQM 136
Query: 124 ILAGVQT---------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
ILAGV+ KVAVDAVFDSVSV TTF++ELKK+GVIF ISEAI +HP+LVK
Sbjct: 137 ILAGVEGAEDIDAKAPRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIKDHPELVK 196
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
KYL TVVPV DN+YA LNSAVF+DGSFVYIP GVRCPMELSTYFRIN + TGQFERTLII
Sbjct: 197 KYLGTVVPVSDNYYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLII 256
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
AD+GSYVSYLEGCTAPQRDE+QLHAAVVE++ ++AE+KYSTVQNWYPGD +GKGGIYNF
Sbjct: 257 ADKGSYVSYLEGCTAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEEGKGGIYNF 316
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VTKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTK
Sbjct: 317 VTKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTK 376
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+HL KNT SRIVSKGISAG + NTYRG VS+H A +RNFTQCDSLLIG+ CGAHT+P
Sbjct: 377 MIHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDARNFTQCDSLLIGDQCGAHTVP 436
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
YIE KN+S +EHEATTSK+ DE LFYC QRGI EE A+AL+VNGF +EVLQ LPMEFA+
Sbjct: 437 YIEVKNNSARVEHEATTSKVDDEQLFYCRQRGIGEEDAVALVVNGFCKEVLQALPMEFAM 496
Query: 475 EAQKLIDISLEGSVG 489
EAQ+L+ ISLEGSVG
Sbjct: 497 EAQQLVAISLEGSVG 511
>gi|260574651|ref|ZP_05842654.1| FeS assembly protein SufB [Rhodobacter sp. SW2]
gi|259023068|gb|EEW26361.1| FeS assembly protein SufB [Rhodobacter sp. SW2]
Length = 502
Score = 562 bits (1447), Expect = e-158, Method: Composition-based stats.
Identities = 346/490 (70%), Positives = 410/490 (83%), Gaps = 6/490 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RET++ V + +YKYG+ET I++D APKG++EDI+R ISAK EP+WML+WRL AYRR
Sbjct: 14 RETIEAVHAM-SGKYKYGWETEIEMDFAPKGVSEDIVRLISAKNGEPEWMLDWRLAAYRR 72
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W+TM +P WA + YP ID+ D+YYYA PKS+ P+SLD+VDP+LL TY KLGIP++EQ
Sbjct: 73 WVTMTEPRWAMLHYPEIDYQDIYYYAKPKSMAGKPKSLDEVDPKLLATYAKLGIPLKEQA 132
Query: 124 ILAGVQ----TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
LAGVQ +VAVDAVFDSVSV TTFK EL K+GVIF ISEA+ +HPDLV+KY+ +
Sbjct: 133 FLAGVQDEAAPRRVAVDAVFDSVSVGTTFKAELAKAGVIFCSISEALRDHPDLVRKYIGS 192
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++A LNSAVF+DGSFVYIP+GVRCPMELSTYFRIN + TGQFERTLIIA++GS
Sbjct: 193 VVPQTDNYFATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINAENTGQFERTLIIAEKGS 252
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+VSYLEGCTAP+RD NQLHAAVVE+V L++AE+KYSTVQNWYPGD G GGIYNFVTKR
Sbjct: 253 HVSYLEGCTAPKRDTNQLHAAVVEIVILEDAEVKYSTVQNWYPGDENGVGGIYNFVTKRA 312
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG R+K+ WTQ+ETGSAITWKYPSC+LRGE S GEFYSIAI+N QQ D+GTKM+HL
Sbjct: 313 DCRGARAKVMWTQVETGSAITWKYPSCILRGEASQGEFYSIAIANNAQQADTGTKMIHLG 372
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PYIE K
Sbjct: 373 KNTRSRIVSKGISAGRAQNTYRGLVSMHPKATGSRNYTQCDSLLIGDKCGAHTVPYIEVK 432
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S +EHEATTSK+ DE LFYC RG+ EE A+AL+VNGF +EVLQ LPMEFA+EAQ L
Sbjct: 433 NNSSRVEHEATTSKVDDEQLFYCRSRGMDEEEAVALVVNGFCKEVLQSLPMEFALEAQAL 492
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 493 VAISLEGSVG 502
>gi|288940479|ref|YP_003442719.1| FeS assembly protein SufB [Allochromatium vinosum DSM 180]
gi|288895851|gb|ADC61687.1| FeS assembly protein SufB [Allochromatium vinosum DSM 180]
Length = 481
Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats.
Identities = 323/481 (67%), Positives = 392/481 (81%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V I +Y++GF T I+ D P GL+E+++R IS +K EP++M E RL AYR WLTM+
Sbjct: 6 AVEDIVKSEYEHGFTTEIESDTLPPGLDEEVVRAISKRKGEPEFMTEQRLKAYRHWLTMR 65
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+P WA + YP IDF + YY+APK P+SLD++DP LL TY KLGIPI EQ+ LAG+
Sbjct: 66 EPEWAAVDYPRIDFQAISYYSAPKRPEDMPKSLDEIDPALLETYNKLGIPIEEQKALAGI 125
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
AVDAVFDSVSV TTF+ L ++GVIF ISEA+ E+P+LVK YL TVVP DNFY
Sbjct: 126 -----AVDAVFDSVSVATTFRATLAEAGVIFCSISEALHEYPELVKPYLGTVVPYTDNFY 180
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A LN+AVF+DG+FVY+PKGVRCPMELSTYFRIN + TGQFERTLI+A+ GSYVSYLEGCT
Sbjct: 181 ACLNAAVFSDGTFVYVPKGVRCPMELSTYFRINARNTGQFERTLIVAEAGSYVSYLEGCT 240
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAAVVEL+A+++AEIKYSTVQNWYPGD++G+GGIYNFVTKRGDCRG RSKI
Sbjct: 241 APQRDENQLHAAVVELIAMEDAEIKYSTVQNWYPGDAEGRGGIYNFVTKRGDCRGARSKI 300
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++ G QQ D+GTKM+H+ +NT+S IVS
Sbjct: 301 SWTQVETGSAITWKYPSCILRGDGSIGEFYSVAVTKGRQQADTGTKMIHIGRNTSSTIVS 360
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG + TYRG V + + A +RN TQCDSLLIG+ C A+T+PYIE KN S +EHE
Sbjct: 361 KGISAGEGSQTYRGLVRIGQRAEGARNHTQCDSLLIGDRCAANTVPYIEVKNPSAKMEHE 420
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKISD+ LFYC RG+ EE A+++IVNGF +EV +LPMEFAVEAQKL+ ISLEG+V
Sbjct: 421 ATTSKISDDQLFYCRSRGLTEEDAVSMIVNGFCKEVFNELPMEFAVEAQKLLSISLEGAV 480
Query: 489 G 489
G
Sbjct: 481 G 481
>gi|87198221|ref|YP_495478.1| cysteine desulfurase activator complex subunit SufB
[Novosphingobium aromaticivorans DSM 12444]
gi|87133902|gb|ABD24644.1| Iron-regulated ABC transporter membrane component SufB
[Novosphingobium aromaticivorans DSM 12444]
Length = 493
Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats.
Identities = 339/493 (68%), Positives = 409/493 (82%), Gaps = 4/493 (0%)
Query: 1 MVAVRETVDKVRKIDVDQ---YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
M E D+ + + Y++G+ ++I+ + PKGL+ED +RFISAKK+EP+WMLEW
Sbjct: 1 MTDNTEVKDQAAREAAARVAEYEHGWVSDIEQEYGPKGLSEDTVRFISAKKDEPEWMLEW 60
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL AYR WLTM P WA++ P ID+ + YY+AAPK+ SLD+VDPE+LR YEKLGI
Sbjct: 61 RLKAYRHWLTMPTPEWAKLNIPPIDYQEAYYWAAPKAKPKLGSLDEVDPEILRVYEKLGI 120
Query: 118 PIREQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ EQ++LAGV+ KVAVDAVFDSVSV TTF++EL+ +GVIF ISEAI E+PDLV+K+
Sbjct: 121 PLEEQKVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAGVIFRSISEAIREYPDLVRKW 180
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L VVP+ DN++A LN AVF+DG+FVYIP+GVRCPMELSTYFRIN + TGQFERTLI+AD
Sbjct: 181 LGKVVPMHDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAD 240
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+GSYVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD++G+GGIYNFVT
Sbjct: 241 KGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYNFVT 300
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR C+G RSK+SWTQ+ETGSAITWKYPSC+L GE S GEFYS+A++N QQ D+GTKM+
Sbjct: 301 KRALCQGARSKVSWTQVETGSAITWKYPSCVLNGEDSVGEFYSVAVTNNHQQADTGTKMI 360
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H K + S IVSKGISAG SNNTYRG V V A RNFTQCDSLL+G++CGAHT+PYI
Sbjct: 361 HNGKGSRSTIVSKGISAGKSNNTYRGLVRVAPQAEGVRNFTQCDSLLLGSDCGAHTVPYI 420
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E +N S +EHEATTSKISD+ LFY +QRG+ +E+A+ALIVNGF REVLQ+LPMEFAVEA
Sbjct: 421 EVRNPSATIEHEATTSKISDDQLFYAMQRGLDQESAVALIVNGFAREVLQQLPMEFAVEA 480
Query: 477 QKLIDISLEGSVG 489
QKL+ ISLEGSVG
Sbjct: 481 QKLLGISLEGSVG 493
>gi|307294772|ref|ZP_07574614.1| FeS assembly protein SufB [Sphingobium chlorophenolicum L-1]
gi|306879246|gb|EFN10464.1| FeS assembly protein SufB [Sphingobium chlorophenolicum L-1]
Length = 494
Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats.
Identities = 342/494 (69%), Positives = 403/494 (81%), Gaps = 8/494 (1%)
Query: 4 VRETVDKVRKIDVDQ-------YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
+ E VR ++ + Y++G+ + I+ D APKGLNED +RFISAKK EP+W+LE
Sbjct: 1 MTEEATTVRNLEAHEAAERASAYEHGWSSAIEQDFAPKGLNEDTVRFISAKKKEPEWLLE 60
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
WRL A+ W M+ P WA++ P ID+ D YYYA PK +SLD++DPE+ TYEKLG
Sbjct: 61 WRLKAFAMWQKMESPDWAKLNIPPIDYQDAYYYAEPKKKAELESLDELDPEIRATYEKLG 120
Query: 117 IPIREQEILAGVQTS-KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IPI EQE+LAGV+ S KVAVDAVFDSVSV TTF++EL+++GVIF ISEA+ E+PDLVKK
Sbjct: 121 IPIAEQEVLAGVKNSRKVAVDAVFDSVSVATTFRKELEEAGVIFRSISEAVREYPDLVKK 180
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
+L VVP+ DN++A LN AVF+DG+FVYIPKGVRCPMELSTYFRIN + TGQFERTLI+A
Sbjct: 181 WLGKVVPMHDNYFATLNCAVFSDGTFVYIPKGVRCPMELSTYFRINAENTGQFERTLIVA 240
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DEGSYVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFV
Sbjct: 241 DEGSYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFV 300
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR C+G SK+SWTQ+ETGSAITWKYPSC+L GE S GEFYS+A++N QQ D+GTKM
Sbjct: 301 TKRALCQGRNSKVSWTQVETGSAITWKYPSCVLNGENSVGEFYSVALTNNLQQADTGTKM 360
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+H K + S IVSKGISAG SNNTYRG V V GA RNFTQCDSLL+G+ CGAHT+PY
Sbjct: 361 IHNGKGSRSTIVSKGISAGRSNNTYRGLVRVAPGAEGVRNFTQCDSLLLGDQCGAHTVPY 420
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE +N S +EHEATTSKISD+ LFY LQRG+ +EAA++LIVNGF REVLQ+LPMEFAVE
Sbjct: 421 IEVRNPSAQIEHEATTSKISDDQLFYALQRGLDQEAAVSLIVNGFAREVLQQLPMEFAVE 480
Query: 476 AQKLIDISLEGSVG 489
AQKL+ ISLEGSVG
Sbjct: 481 AQKLLGISLEGSVG 494
>gi|99081083|ref|YP_613237.1| cysteine desulfurase activator complex subunit SufB [Ruegeria sp.
TM1040]
gi|99037363|gb|ABF63975.1| Iron-regulated ABC transporter membrane component SufB [Ruegeria
sp. TM1040]
Length = 506
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 347/494 (70%), Positives = 413/494 (83%), Gaps = 11/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG++T+I+++ APKG+N+DI+R IS K EP+WM EWRL A+ R
Sbjct: 15 QETVDAVREV--STYKYGWDTDIEMEYAPKGVNQDIVRLISEKNEEPEWMTEWRLQAFER 72
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W MK+P+WA + YP IDF + YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 73 WEGMKEPNWAMVNYPEIDFQNQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 132
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF++ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 133 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIREHPELVKK 192
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 193 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 252
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNW+PGD GKGGIYNFV
Sbjct: 253 DKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPGDENGKGGIYNFV 312
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTKM
Sbjct: 313 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKM 372
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K+T SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 373 IHLGKDTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPY 432
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 433 IEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 492
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 493 AQQLVAISLEGSVG 506
>gi|254476697|ref|ZP_05090083.1| FeS assembly protein SufB [Ruegeria sp. R11]
gi|214030940|gb|EEB71775.1| FeS assembly protein SufB [Ruegeria sp. R11]
Length = 507
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 351/494 (71%), Positives = 411/494 (83%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ET+I+++ APKG+N DI+R IS K EP+WM EWRL A+ R
Sbjct: 15 QETVDAVREVG-GAYKYGWETDIEMEYAPKGVNPDIVRLISDKNEEPEWMTEWRLQAFER 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W M +P+WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WEKMDEPNWAMVNYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 134 ILAGVEGAEDMPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGSVVPVTDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRGE+S GEFYSIAI+N QQ D+GTKM
Sbjct: 314 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGEESQGEFYSIAIANNMQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 VHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|84516299|ref|ZP_01003659.1| FeS assembly protein SufB [Loktanella vestfoldensis SKA53]
gi|84509995|gb|EAQ06452.1| FeS assembly protein SufB [Loktanella vestfoldensis SKA53]
Length = 507
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 345/494 (69%), Positives = 406/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD V + YKYG+ET I++D APKG+N DI+R IS+K EP+WM EWRL A+ R
Sbjct: 15 QDTVDAVTAL-SGNYKYGWETEIEMDYAPKGVNPDIVRLISSKNEEPEWMTEWRLQAFTR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W M +P+WA + YP IDF D+YYYA PKS+ P+SLDDVDP+LL TY KLGIP++EQ
Sbjct: 74 WEKMNEPTWAMVSYPPIDFQDIYYYARPKSMAVKPKSLDDVDPKLLATYAKLGIPLKEQA 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI +HP+LVKK
Sbjct: 134 ILAGVEGAEDMPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIRDHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVP DN+YA LNSAVF+DGSFVYIP GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGSVVPQSDNYYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP+RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPKRDVAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 314 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 VHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDQCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF +EVLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 494 AQALVAISLEGSVG 507
>gi|326386611|ref|ZP_08208233.1| cysteine desulfurase activator complex subunit SufB
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208926|gb|EGD59721.1| cysteine desulfurase activator complex subunit SufB
[Novosphingobium nitrogenifigens DSM 19370]
Length = 512
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 334/469 (71%), Positives = 402/469 (85%), Gaps = 1/469 (0%)
Query: 22 GFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI 81
G+ ++I+ + PKGL+ED +RFIS++KNEP+WMLEWRL AYR WLTM P WA+++ P I
Sbjct: 44 GWVSDIEQEFGPKGLSEDTVRFISSRKNEPEWMLEWRLKAYRHWLTMPMPDWAKLKIPPI 103
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT-SKVAVDAVFD 140
D+ YY+AAPKS GP+SLD+VDPE+LR YEKLGIP+ EQ++LAGV+ KVAVDAVFD
Sbjct: 104 DYQAAYYWAAPKSKDGPKSLDEVDPEILRVYEKLGIPLEEQKVLAGVEGARKVAVDAVFD 163
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
SVSV TTF++EL+ +GVIF ISEAI E PDLV+++L VVP+ DN+++ALN AVF+DG+
Sbjct: 164 SVSVATTFRKELEAAGVIFRSISEAIREFPDLVRRWLGKVVPMHDNYFSALNCAVFSDGT 223
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
FVYIP+GVRCPMELSTYFRIN + TGQFERTLI+AD+G+YVSYLEGCTAPQRDENQLHAA
Sbjct: 224 FVYIPEGVRCPMELSTYFRINAENTGQFERTLIVADKGAYVSYLEGCTAPQRDENQLHAA 283
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
VVELVALD+AEIKYSTVQNWYPGD+QG+GGIYNFVTKR C+G RSK+SWTQ+ETGSAIT
Sbjct: 284 VVELVALDDAEIKYSTVQNWYPGDAQGRGGIYNFVTKRALCQGARSKVSWTQVETGSAIT 343
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
WKYPSC+L GE S GEFYS+A++N +QQ D+GTKM+H K + S IVSKGISAG SNNTY
Sbjct: 344 WKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMIHNGKRSRSTIVSKGISAGHSNNTY 403
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG V V A RNFTQCDSLL+G +CGAHT+PYIE +N + +EHEATTSKISD+ +F
Sbjct: 404 RGLVRVAPQAEGVRNFTQCDSLLLGADCGAHTVPYIEVRNPTATVEHEATTSKISDDQMF 463
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
Y +QRG+ +E A+ALIVNGF REVLQ+LPMEFAVEAQKL+ ISLEGSVG
Sbjct: 464 YAMQRGLSQEDAVALIVNGFAREVLQQLPMEFAVEAQKLLGISLEGSVG 512
>gi|224823960|ref|ZP_03697068.1| FeS assembly protein SufB [Lutiella nitroferrum 2002]
gi|224603379|gb|EEG09554.1| FeS assembly protein SufB [Lutiella nitroferrum 2002]
Length = 482
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 314/487 (64%), Positives = 399/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + K+ ++ +Y++GF T+++ D P+GL+E++IR ISAKK EPD++LEWRL AYR
Sbjct: 1 MASSTVKLDELISQEYRHGFFTSVETDTVPRGLSEEVIRLISAKKGEPDFLLEWRLRAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM +P W+ + +P ID+ D+ YY+APKS GP+SLD++DPEL RTYEKLG+P+ E+
Sbjct: 61 HWLTMAEPHWSTVHHPPIDYQDIAYYSAPKSRQDGPKSLDEIDPELRRTYEKLGVPLEER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+LAG VAVDAVFDSVSV TTFK++L G+IF SEA+ EHP+LV++YL +VVP
Sbjct: 121 ALLAG-----VAVDAVFDSVSVATTFKDKLAGLGIIFCSFSEAVREHPELVQQYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+A+LNSAVF+DGSF YIP GVRCPMELSTYFRIN + TGQFERTLIIAD+G+YVS
Sbjct: 176 YTDNFFASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINARNTGQFERTLIIADKGAYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+AL++A+IKY+TVQNWYPGD +G GGIYNFVTKRGDCR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKEGHGGIYNFVTKRGDCR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSAITWKYPS +L+G+ + GEFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 296 GDNSKISWTQVETGSAITWKYPSVILQGDNAVGEFYSVALTNHYQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG +N YRG V V + A +RN+TQCDSLL+G+ C AHT PYIE KN +
Sbjct: 356 RSTILSKGISAGHGSNAYRGLVKVAKSAVGARNYTQCDSLLLGDRCAAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TS+I ++ LFYC RGI E A+++IV+GF +EV ++LPMEFAVEAQKL+ +
Sbjct: 416 ARVEHEASTSRIGEDQLFYCQSRGIAPEDAVSMIVSGFCKEVFKELPMEFAVEAQKLLGV 475
Query: 483 SLEGSVG 489
SLEGS+G
Sbjct: 476 SLEGSIG 482
>gi|300113346|ref|YP_003759921.1| FeS assembly protein SufB [Nitrosococcus watsonii C-113]
gi|299539283|gb|ADJ27600.1| FeS assembly protein SufB [Nitrosococcus watsonii C-113]
Length = 482
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 329/487 (67%), Positives = 397/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + KV + +Y+ GF T+I+ D P GLNE++IR IS+KKNEP++MLEWRL AYR
Sbjct: 1 MTNSTLKVENLVQKEYRAGFITDIEADSIPPGLNENVIRLISSKKNEPEFMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WL MK P WA + YP +D+ + YY+APKS GP+SLD+VDP+LL TYEKLG+P+ E+
Sbjct: 61 HWLEMKTPEWAHVHYPPVDYQSIIYYSAPKSKKDGPKSLDEVDPKLLETYEKLGVPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTFKE+L ++GVIF P SEA+ +HP+LV+KYL TVVP
Sbjct: 121 ARLAG-----VAVDAVFDSVSVATTFKEKLSEAGVIFCPFSEAVRDHPELVEKYLGTVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+PKGVRCP+ELSTYFRIN TGQFERTLIIADEG++VS
Sbjct: 176 CRDNFYAALNSAVFSDGSFVYVPKGVRCPLELSTYFRINAAQTGQFERTLIIADEGAHVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVAL NAEIKYSTVQNWYPGD +G+GGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALGNAEIKYSTVQNWYPGDEEGRGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +KISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ +NT
Sbjct: 296 GANAKISWTQVETGSAITWKYPSVILQGDNSVGEFYSVALTNNFQQADTGTKMIHMGRNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG N YRG V V A +RN+TQCDSLL+G+ CGAHT PYIE K+ S
Sbjct: 356 RSTIISKGISAGRGQNAYRGLVRVTPTAVGARNYTQCDSLLLGDRCGAHTFPYIEVKHPS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKIS++ LFYC QRGI E AI++IVNGF +EV ++LPMEFAVEA+ L+ +
Sbjct: 416 AQVEHEASTSKISEDQLFYCKQRGISAEDAISMIVNGFCKEVFKELPMEFAVEARNLLSV 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|16331744|ref|NP_442472.1| cysteine desulfurase activator complex subunit SufB [Synechocystis
sp. PCC 6803]
gi|3024872|sp|Q55790|Y074_SYNY3 RecName: Full=UPF0051 protein slr0074
gi|1001705|dbj|BAA10542.1| ABC transporter subunit [Synechocystis sp. PCC 6803]
Length = 480
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 313/481 (65%), Positives = 387/481 (80%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V+ + YKYGF TNI+ D P+GL+ED++R ISAKKNEP++ML++RL AYR WLTM
Sbjct: 5 TVKNLVNQPYKYGFVTNIEADAIPRGLSEDVVRLISAKKNEPEFMLDFRLRAYRHWLTMA 64
Query: 70 DPSWARIRYPAIDFDDLYYYAAPK-SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+P+W + YP ID+ D+ YY+APK S +SLD+VDP LL T+EKLGIP+ EQ+ L+
Sbjct: 65 EPTWPAVHYPPIDYQDIIYYSAPKQSKKKLESLDEVDPALLETFEKLGIPLSEQKRLS-- 122
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDA+FDSVS+ TTFKE+L + GVIF ISEA+ EHPDLV+KYL +VVP DNF+
Sbjct: 123 ---NVAVDAIFDSVSIGTTFKEKLAEDGVIFCSISEALQEHPDLVQKYLGSVVPTADNFF 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLIIA+EG+ VSYLEGCT
Sbjct: 180 AALNSAVFSDGSFVFIPKGVKCPMELSTYFRINNGDTGQFERTLIIAEEGASVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D NQLHAAVVELVALDNA+IKYSTVQNWY GD GKGGIYNFVTKRG C+G+ SKI
Sbjct: 240 APMYDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGKGGIYNFVTKRGLCKGVNSKI 299
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+ KNT S I+S
Sbjct: 300 SWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIGKNTRSIIIS 359
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG V + A +RN++QCDS+LIG+ A+T PYI+ N++ +EHE
Sbjct: 360 KGISAGNSANSYRGLVKMGPKAQGARNYSQCDSMLIGDRAAANTFPYIQVDNNTAKVEHE 419
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI ++ LFY QRGI EE A++++V+GF ++VL +LPMEFA EA KL+ + LEG+V
Sbjct: 420 ASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPMEFAAEADKLLSLKLEGTV 479
Query: 489 G 489
G
Sbjct: 480 G 480
>gi|257058332|ref|YP_003136220.1| cysteine desulfurase activator complex subunit SufB [Cyanothece sp.
PCC 8802]
gi|256588498|gb|ACU99384.1| FeS assembly protein SufB [Cyanothece sp. PCC 8802]
Length = 480
Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats.
Identities = 316/490 (64%), Positives = 387/490 (78%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P+GLNEDIIR ISAKKNEPD+ML +RL
Sbjct: 1 MSATS-----VKTLVNQPYKYGFVTDIETDTIPRGLNEDIIRLISAKKNEPDFMLAFRLR 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AY++W M +P+W + YP ID+ ++ YY+APK SLD+VDP LL T+EKLGIP+
Sbjct: 56 AYQQWQKMTEPTWPHVTYPPIDYQNMIYYSAPKQKKEKLGSLDEVDPTLLETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L VAVDA+FDSVS+ TTFKE+L +SGVIF ISEA+ EHP+LVKKYL T
Sbjct: 116 SEQKRL-----GNVAVDAIFDSVSIATTFKEKLAESGVIFCSISEALQEHPELVKKYLGT 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNF+AALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 171 VVPVADNFFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAA+VELVALDNAEIKYSTVQNWY GD GKGGIYNFVTKRG
Sbjct: 231 SVSYLEGCTAPMYDSNQLHAAIVELVALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V + A +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 KNTRSTIISKGISAGGSKNSYRGLVKIGPKADGARNYSQCDSMLIGDNAQANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGI EE A++++V+GF ++VL +LPMEFA EA KL
Sbjct: 411 NNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLNELPMEFAAEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|255264718|ref|ZP_05344060.1| FeS assembly protein SufB [Thalassiobium sp. R2A62]
gi|255107053|gb|EET49727.1| FeS assembly protein SufB [Thalassiobium sp. R2A62]
Length = 503
Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats.
Identities = 350/490 (71%), Positives = 412/490 (84%), Gaps = 6/490 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD V+++ YKYG+ET I+++ APKGL+EDI+R IS+K +EP+WMLEWRL AYRR
Sbjct: 15 QDTVDAVKEL-SGTYKYGWETEIEMEYAPKGLSEDIVRLISSKNDEPEWMLEWRLAAYRR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL + +P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 74 WLELTEPDWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLETYKKLGIPLKEQA 133
Query: 124 ILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+LAGV+ KVAVDAVFDSVSV TTF+ EL K+GVIF ISEAI EHP+LV+KYL +
Sbjct: 134 LLAGVEAPEEERKVAVDAVFDSVSVGTTFQAELAKAGVIFCSISEAIKEHPELVQKYLGS 193
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+YA LNSAVF+DGSFVYIP GVRCPMELSTYFRIN + TGQFERTLIIAD+ S
Sbjct: 194 VVPVSDNYYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIADKES 253
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRD QLHAAVVELV +D+AEIKYSTVQNW+PGD GKGGIYNFVTKR
Sbjct: 254 YVSYLEGCTAPQRDVAQLHAAVVELVLMDDAEIKYSTVQNWFPGDENGKGGIYNFVTKRA 313
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM+HL
Sbjct: 314 DCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHLG 373
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PYIE K
Sbjct: 374 KNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVK 433
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+EAQ L
Sbjct: 434 NNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEAQAL 493
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 494 VAISLEGSVG 503
>gi|91790107|ref|YP_551059.1| cysteine desulfurase activator complex subunit SufB [Polaromonas
sp. JS666]
gi|91699332|gb|ABE46161.1| Iron-regulated ABC transporter membrane component SufB [Polaromonas
sp. JS666]
Length = 482
Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats.
Identities = 323/487 (66%), Positives = 399/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + ++ K+ Y++GF T ++ D P+GL+ED++R ISAKK EPD+ML+WRL AYR
Sbjct: 1 MANSTVQLDKLISQGYQHGFYTTVETDTVPRGLSEDVVRLISAKKGEPDFMLDWRLQAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM +P WA +R+P I + D+ YY+APKS GPQSLDDVDPELLRTYEKLG+P+ E+
Sbjct: 61 HWLTMTEPRWATVRHPPITYQDIAYYSAPKSRKDGPQSLDDVDPELLRTYEKLGVPLEER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+LAG VAVDAVFDSVSV TTFKE+L + G++F SEA+ +HPDLV+KYL +VVP
Sbjct: 121 ALLAG-----VAVDAVFDSVSVATTFKEKLGELGIVFCSFSEAVQQHPDLVRKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+A LNSAVF+DGSF YIP GVRCPMELSTYFRIN + TGQFERTLIIAD+G+YVS
Sbjct: 176 YTDNFFATLNSAVFSDGSFCYIPPGVRCPMELSTYFRINAQNTGQFERTLIIADKGAYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+AL+ A+IKY+TVQNWYPGD +GKGGIYNFVTKRGDCR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELIALEGAQIKYATVQNWYPGDKEGKGGIYNFVTKRGDCR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSAITWKYPS +L+G+ + GEFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 296 GANSKISWTQVETGSAITWKYPSVILQGDNAVGEFYSVALTNHYQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG N YRG V V +GAA +RN+TQCDSLL+G+ C AHT PYIE KN +
Sbjct: 356 RSTILSKGISAGHGQNAYRGLVKVAKGAAGARNYTQCDSLLLGDRCAAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TS+I ++ LFYC RG+ E A+++IVNGF +EV ++LPMEFAVEAQKL+ +
Sbjct: 416 ARVEHEASTSRIGEDQLFYCQSRGLAPEDAVSMIVNGFCKEVFKELPMEFAVEAQKLLGV 475
Query: 483 SLEGSVG 489
SLEGS+G
Sbjct: 476 SLEGSIG 482
>gi|77165948|ref|YP_344473.1| cysteine desulfurase activator complex subunit SufB [Nitrosococcus
oceani ATCC 19707]
gi|254434462|ref|ZP_05047970.1| FeS assembly protein SufB [Nitrosococcus oceani AFC27]
gi|76884262|gb|ABA58943.1| Iron-regulated ABC transporter membrane component SufB
[Nitrosococcus oceani ATCC 19707]
gi|207090795|gb|EDZ68066.1| FeS assembly protein SufB [Nitrosococcus oceani AFC27]
Length = 482
Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats.
Identities = 327/487 (67%), Positives = 397/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + KV + +Y+ GF T+I+ D P GLNE++IR IS+KKNEP++MLEWRL AYR
Sbjct: 1 MTNSTLKVENLVQKEYRAGFVTDIEADSIPPGLNENVIRLISSKKNEPEFMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WL MK P WA + YP +D+ + YY+APKS GP+SLD+VDP+LL TYEKLG+P+ E+
Sbjct: 61 HWLEMKTPEWAHVHYPPVDYQSIIYYSAPKSKKDGPKSLDEVDPKLLETYEKLGVPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTFKE+L ++GVIF P SEA+ ++P+LV+KYL TVVP
Sbjct: 121 ARLAG-----VAVDAVFDSVSVATTFKEKLSEAGVIFCPFSEAVRDYPELVEKYLGTVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+PKGVRCP+ELSTYFRIN TGQFERTLIIADEG++VS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYVPKGVRCPLELSTYFRINAAQTGQFERTLIIADEGAHVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVAL +AEIKYSTVQNWYPGD +G+GGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALGDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +KISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ +NT
Sbjct: 296 GANAKISWTQVETGSAITWKYPSVILQGDNSVGEFYSVALTNNFQQADTGTKMIHMGRNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG N YRG V V A +RN+TQCDSLL+G+ CGAHT PYIE K+ S
Sbjct: 356 RSTIISKGISAGQGQNAYRGLVRVTPTAVGARNYTQCDSLLLGDRCGAHTFPYIEVKHPS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKIS++ LFYC QRGI E AI++IVNGF +EV ++LPMEFAVEA+ L+ +
Sbjct: 416 AQVEHEASTSKISEDQLFYCKQRGISAEDAISMIVNGFCKEVFKELPMEFAVEARNLLSV 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|126736368|ref|ZP_01752110.1| FeS assembly protein SufB [Roseobacter sp. CCS2]
gi|126714189|gb|EBA11058.1| FeS assembly protein SufB [Roseobacter sp. CCS2]
Length = 507
Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats.
Identities = 345/494 (69%), Positives = 407/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD V+++ YKYG+ET I+++ APKG+N DI+R IS+K EP+WM EWRL A+ R
Sbjct: 15 QDTVDAVKEL-SGNYKYGWETEIEMEYAPKGVNPDIVRLISSKNKEPEWMTEWRLSAFER 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W +++P+WA + YP IDF D+YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WEKIEEPTWAMVNYPDIDFQDIYYYARPKSMEEKPKSLDEVDPKLLATYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI HP+LVKK
Sbjct: 134 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIENHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TVVP DNFYA LNSAVF+DGSFVYIP GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGTVVPPSDNFYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP+RD QLHAAVVE++ ++AE+KYSTVQNWYPGD G GGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPKRDTAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEDGNGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 314 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 VHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAQASRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF +EVLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 494 AQALVAISLEGSVG 507
>gi|227539031|ref|ZP_03969080.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227241087|gb|EEI91102.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 499
Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats.
Identities = 334/485 (68%), Positives = 395/485 (81%), Gaps = 4/485 (0%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ D +++++ ++YKYGF T+I++D AP GL ED +R IS KKNEP+W+LEWRL A+R
Sbjct: 19 TKDDDILKELEQEEYKYGFTTDIEMDIAPTGLTEDTVRLISEKKNEPEWLLEWRLKAFRH 78
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+LT+K P+W R P +DF + YYAAPK+ SLD+VDPELL T+ KLGIP+ EQ+I
Sbjct: 79 FLTLKMPTWQNFRNPDVDFQAISYYAAPKAKPQLNSLDEVDPELLATFAKLGIPLDEQKI 138
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAGV VAVDAVFDSVSV TTF+E+LK+ GVIF EA+ E+P+LVK+YL TVVP
Sbjct: 139 LAGV----VAVDAVFDSVSVKTTFREKLKEQGVIFCSFGEAVQEYPELVKEYLGTVVPQT 194
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN YAALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLIIADEGSYVSYL
Sbjct: 195 DNIYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAQNTGQFERTLIIADEGSYVSYL 254
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP RDENQLHAAVVELVA +AEIKYSTVQNWYPGD GKGGIYNFVTKRG C+G
Sbjct: 255 EGCTAPTRDENQLHAAVVELVAQRDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGICKGD 314
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SKISWTQ+ETGSAITWKYP +L+G+ S GEFYS+A++ Q D+GTKM+HL KNT S
Sbjct: 315 NSKISWTQVETGSAITWKYPGVILKGDNSVGEFYSVALTRNMQVADTGTKMIHLGKNTRS 374
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+IVSKGISAG S+N+YRG V + A +SRNFTQCDSLLIG+ CGAHT PYIE+KN +
Sbjct: 375 KIVSKGISAGKSHNSYRGLVKIGPNADNSRNFTQCDSLLIGDKCGAHTFPYIENKNRTAV 434
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
LEHEATTSKI ++ +FY QRGI E A+ LIVNG+ +EVL +LPMEFAVEAQKL+ ISL
Sbjct: 435 LEHEATTSKIGEDQVFYLNQRGIDSEKAVGLIVNGYAKEVLNQLPMEFAVEAQKLLAISL 494
Query: 485 EGSVG 489
EGSVG
Sbjct: 495 EGSVG 499
>gi|300770539|ref|ZP_07080418.1| FeS assembly ABC superfamily ATP binding cassette transporter,
membrane protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300763015|gb|EFK59832.1| FeS assembly ABC superfamily ATP binding cassette transporter,
membrane protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 499
Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats.
Identities = 334/485 (68%), Positives = 395/485 (81%), Gaps = 4/485 (0%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ D +++++ ++YKYGF T+I++D AP GL ED +R IS KKNEP+W+LEWRL A+R
Sbjct: 19 TKDDDILKELEQEEYKYGFTTDIEMDIAPTGLTEDTVRLISEKKNEPEWLLEWRLKAFRH 78
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+LT+K P+W R P +DF + YYAAPK+ SLD+VDPELL T+ KLGIP+ EQ+I
Sbjct: 79 FLTLKMPTWQNFRNPDVDFQAISYYAAPKAKPQLNSLDEVDPELLSTFAKLGIPLDEQKI 138
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAGV VAVDAVFDSVSV TTF+E+LK+ GVIF EA+ E+P+LVK+YL TVVP
Sbjct: 139 LAGV----VAVDAVFDSVSVKTTFREKLKEQGVIFCSFGEAVQEYPELVKEYLGTVVPQT 194
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN YAALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLIIADEGSYVSYL
Sbjct: 195 DNIYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAQNTGQFERTLIIADEGSYVSYL 254
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP RDENQLHAAVVELVA +AEIKYSTVQNWYPGD GKGGIYNFVTKRG C+G
Sbjct: 255 EGCTAPTRDENQLHAAVVELVAQRDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGICKGD 314
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SKISWTQ+ETGSAITWKYP +L+G+ S GEFYS+A++ Q D+GTKM+HL KNT S
Sbjct: 315 NSKISWTQVETGSAITWKYPGVILKGDNSVGEFYSVALTRNMQVADTGTKMIHLGKNTRS 374
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+IVSKGISAG S+N+YRG V + A +SRNFTQCDSLLIG+ CGAHT PYIE+KN +
Sbjct: 375 KIVSKGISAGKSHNSYRGLVKIGPNADNSRNFTQCDSLLIGDKCGAHTFPYIENKNRTAV 434
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
LEHEATTSKI ++ +FY QRGI E A+ LIVNG+ +EVL +LPMEFAVEAQKL+ ISL
Sbjct: 435 LEHEATTSKIGEDQVFYLNQRGIDSEKAVGLIVNGYAKEVLNQLPMEFAVEAQKLLAISL 494
Query: 485 EGSVG 489
EGSVG
Sbjct: 495 EGSVG 499
>gi|56752365|ref|YP_173066.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
elongatus PCC 6301]
gi|81300544|ref|YP_400752.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
elongatus PCC 7942]
gi|56687324|dbj|BAD80546.1| ABC transporter subunit [Synechococcus elongatus PCC 6301]
gi|81169425|gb|ABB57765.1| Iron-regulated ABC transporter membrane component SufB
[Synechococcus elongatus PCC 7942]
Length = 479
Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats.
Identities = 315/490 (64%), Positives = 391/490 (79%), Gaps = 12/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ +K KGL+E+++R ISAKK EP+WMLE+RL
Sbjct: 1 MSAT------VQALVNQPYKYGFVTDIETEKIAKGLSEEVVRLISAKKEEPEWMLEFRLK 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPI 119
AYRRWLTM++P WA + YPAID+ ++ YYAAPK QSLD+VDP LL T+EKLGIP+
Sbjct: 55 AYRRWLTMEEPDWAAVGYPAIDYQNIVYYAAPKQKAEKKQSLDEVDPTLLETFEKLGIPL 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LA VAVDAVFDSVS+ TTF+E+L + GVIF ISEA+ E+P++VK+YL +
Sbjct: 115 SEQKRLA-----NVAVDAVFDSVSIATTFREKLAEEGVIFCSISEAVREYPEMVKQYLGS 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+GDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+A+EGS
Sbjct: 170 VVPIGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINSGDTGQFERTLIVAEEGS 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+VSYLEGCTAP D NQLHAAVVELVALD+AEIKYSTVQNWY GD GKGGIYNFVTKRG
Sbjct: 230 HVSYLEGCTAPMFDTNQLHAAVVELVALDDAEIKYSTVQNWYAGDENGKGGIYNFVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+
Sbjct: 290 LCKGRNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNCQQADTGTKMVHIG 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGISAG S N+YRG V V A +RN++QCDS+LIG+ A+T PYI+ +
Sbjct: 350 KNTRSTIVSKGISAGRSQNSYRGLVKVGPQATGARNYSQCDSMLIGDRAAANTFPYIQVQ 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+ +EHEA+TSKI ++ LFY QRGI E A++++++GF ++V +LPMEFAVEA +L
Sbjct: 410 NAGAQVEHEASTSKIGEDQLFYFQQRGISLEDAVSMLISGFCKDVFNQLPMEFAVEADRL 469
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 470 LSLKLEGSVG 479
>gi|126726561|ref|ZP_01742402.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2150]
gi|126704424|gb|EBA03516.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2150]
Length = 503
Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats.
Identities = 342/491 (69%), Positives = 409/491 (83%), Gaps = 6/491 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
ETV+ V+ + YKYG+ T+I+++ APKGL+ DI+R IS+K +EP+WMLEWRL AY
Sbjct: 14 EEETVEAVKSL-AGAYKYGWNTDIEMEYAPKGLSTDIVRLISSKNDEPEWMLEWRLAAYE 72
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
RWL + +P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 73 RWLKLTEPDWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLETYKKLGIPLKEQ 132
Query: 123 EILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+LAGV+ KVAVDAVFDSVSV TTFK+EL K+GVIF ISEAI EHP+LV+KYL
Sbjct: 133 ALLAGVEAPEEERKVAVDAVFDSVSVGTTFKDELAKAGVIFCSISEAIKEHPELVRKYLG 192
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
TVVPV DN+YA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLII D+
Sbjct: 193 TVVPVSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIICDKE 252
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+YVSYLEGCTAPQRD QLHAAVVE+V +++AE+KYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 253 AYVSYLEGCTAPQRDIAQLHAAVVEIVIMEDAEVKYSTVQNWYPGDEDGKGGIYNFVTKR 312
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM+HL
Sbjct: 313 ADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHL 372
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PYIE
Sbjct: 373 GKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEV 432
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+N+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+EAQ
Sbjct: 433 RNNSSRVEHEATTSKVDDDQLFYCRQRGMGEEEAVALVVNGFCKDVLQALPMEFAMEAQA 492
Query: 479 LIDISLEGSVG 489
L+ ISLEGSVG
Sbjct: 493 LVAISLEGSVG 503
>gi|54293584|ref|YP_125999.1| cysteine desulfurase activator complex subunit SufB [Legionella
pneumophila str. Lens]
gi|53753416|emb|CAH14869.1| hypothetical protein lpl0636 [Legionella pneumophila str. Lens]
Length = 482
Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats.
Identities = 327/487 (67%), Positives = 402/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ +++ + +Y++GF T+I+V+ P GL+ED+IR +SA K EP+++LEWRL A+R
Sbjct: 1 MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM P W+ + Y ID+ + YY+APKS P+SLD+VDPELL+TYEKLGIP+REQ
Sbjct: 61 HWLTMPHPEWSSVHYSPIDYQSISYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E+LAG VAVDAVFDSVSV TTFK +L + GVIF P+SEA+ ++PDLVKKYL +VVP
Sbjct: 121 EMLAG-----VAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDLVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN TGQFERTLI+AD SYVS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIVADVDSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+ALD A+IKYSTVQNWYPGD +GKGGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 GKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG ++N YRG V + A ++RN+TQCDS+L+G+ C AHT PYIE KN +
Sbjct: 356 RSTIISKGISAGRAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS+E LFYC QRGI E A+++IVNGF ++VL++LPMEFAVEA KL+ I
Sbjct: 416 AQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGI 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|56696893|ref|YP_167255.1| cysteine desulfurase activator complex subunit SufB [Ruegeria
pomeroyi DSS-3]
gi|56678630|gb|AAV95296.1| FeS assembly protein SufB [Ruegeria pomeroyi DSS-3]
Length = 506
Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats.
Identities = 348/494 (70%), Positives = 406/494 (82%), Gaps = 11/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR+ YKYG+ET I+++ APKG+N DI+R IS K EP+WM EWRL A+ R
Sbjct: 15 QETVDAVRE--AGTYKYGWETEIEMEYAPKGVNPDIVRLISDKNEEPEWMTEWRLAAFER 72
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQE 123
W M +P WA + YP IDF D YYYA PKS+ P+SLDDVDP+LL TYEKLGIP++EQ
Sbjct: 73 WTGMSEPKWAMVSYPEIDFQDQYYYARPKSMSEKPKSLDDVDPKLLATYEKLGIPLKEQM 132
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 133 ILAGVEGAENAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKK 192
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 193 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 252
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP+RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 253 DKGSYVSYLEGCTAPKRDVAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 312
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 313 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 372
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 373 IHLGKNTKSRIVSKGISAGRAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPY 432
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S EHEATTSK+ ++ LFYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 433 IEVKNNSSRCEHEATTSKVDEDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAME 492
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 493 AQQLVAISLEGSVG 506
>gi|113477759|ref|YP_723820.1| cysteine desulfurase activator complex subunit SufB [Trichodesmium
erythraeum IMS101]
gi|110168807|gb|ABG53347.1| Iron-regulated ABC transporter membrane component SufB
[Trichodesmium erythraeum IMS101]
Length = 478
Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats.
Identities = 309/480 (64%), Positives = 385/480 (80%), Gaps = 5/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
KV + YKYGF T+I+ D P+GL+EDI+R ISAKKNEP++ML +RL AY++WL MK
Sbjct: 4 KVTSLVNQPYKYGFVTDIESDTIPRGLSEDIVRLISAKKNEPEFMLNFRLKAYKKWLQMK 63
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P WA + YP ID+ ++ YY+APK +SL++VDP LL T+EKLGIP+ EQ+ L+
Sbjct: 64 EPLWAHVDYPKIDYQNIIYYSAPKLQDKKKSLEEVDPTLLETFEKLGIPLSEQKRLS--- 120
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TTFKE+L + GVIF ISEA+ EHP+LV+KYL +VVPVGDNF+A
Sbjct: 121 --NVAVDAVFDSVSVATTFKEKLAEEGVIFGSISEAVQEHPELVEKYLGSVVPVGDNFFA 178
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IPKGV+CPM+LSTYFRIN +GQFERTLI+A+EGS V+YLEGCTA
Sbjct: 179 ALNSAVFSDGSFVFIPKGVKCPMDLSTYFRINNGESGQFERTLIVAEEGSSVTYLEGCTA 238
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D NQLHAAVVELV LDNAEIKYSTVQNW+ GD GKGGIYNFVTKRG C+G+ SKIS
Sbjct: 239 PMFDTNQLHAAVVELVTLDNAEIKYSTVQNWFAGDENGKGGIYNFVTKRGLCKGVNSKIS 298
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SK
Sbjct: 299 WTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNKQQADTGTKMVHVGKNTRSTIISK 358
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S N+YRG V + GA SRN++QCDS+LIG+ A+T PYI+ N++ +EHEA
Sbjct: 359 GISAGNSANSYRGLVKMGPGAKGSRNYSQCDSMLIGDRAQANTFPYIQVDNNTAKVEHEA 418
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI + LFY QRGI E A+++I++GF ++V +LPMEFA EA KL+ + LEG+VG
Sbjct: 419 STSKIGVDQLFYFAQRGISPEDAVSMIISGFCKDVFNELPMEFAAEADKLLSLKLEGTVG 478
>gi|186684916|ref|YP_001868112.1| cysteine desulfurase activator complex subunit SufB [Nostoc
punctiforme PCC 73102]
gi|186467368|gb|ACC83169.1| FeS assembly protein SufB [Nostoc punctiforme PCC 73102]
Length = 479
Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats.
Identities = 310/490 (63%), Positives = 389/490 (79%), Gaps = 12/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P+GL+ED+IR IS+KKNEP +ML++RL
Sbjct: 1 MSAT------VKTLVNQPYKYGFVTDIEADTIPRGLDEDVIRLISSKKNEPQFMLDFRLR 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPK-SIVGPQSLDDVDPELLRTYEKLGIPI 119
AYR+W M +P+W ++YP I++ D+ YY+APK SLD+VDP LL T+EKLGI +
Sbjct: 55 AYRQWQKMTEPTWPNVKYPPINYQDIIYYSAPKRKKEKLNSLDEVDPTLLETFEKLGISL 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LA VAVDA+FDSVSV TTFKE+L + GVIF SEA+ EHP+L+KKYL +
Sbjct: 115 SEQKRLA-----NVAVDAIFDSVSVATTFKEKLAEDGVIFCSFSEALQEHPELIKKYLGS 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+ DN++AALN+AVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLI+A+EGS
Sbjct: 170 VVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGS 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP D NQLHAAVVELVALDNAEIKYSTVQNWY GD+ GKGGIYNFVTKRG
Sbjct: 230 YVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+G+KM+H+
Sbjct: 290 LCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNHQQQADTGSKMIHVG 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S+N+YRG V V+ A +RN++QCDS+LIG+N A+T PYI+ +
Sbjct: 350 KNTRSTIISKGISAGNSSNSYRGLVKVNPTANGARNYSQCDSMLIGDNAHANTFPYIQVQ 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+ +EHEA+TSKI ++ LFY QRGI E AI+++++GF ++V +LPMEFAVEA KL
Sbjct: 410 NNGAKVEHEASTSKIGEDQLFYFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKL 469
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 470 LSLKLEGSVG 479
>gi|84503549|ref|ZP_01001600.1| FeS assembly protein SufB [Oceanicola batsensis HTCC2597]
gi|84388039|gb|EAQ01087.1| FeS assembly protein SufB [Oceanicola batsensis HTCC2597]
Length = 510
Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats.
Identities = 355/498 (71%), Positives = 409/498 (82%), Gaps = 15/498 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR + YKYG+ET I+ D AP GLNEDI+R IS K EPDWMLEWRL A+ R
Sbjct: 15 QETVDAVRAV--GTYKYGWETEIETDYAPMGLNEDIVRLISEKNGEPDWMLEWRLQAFER 72
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W ++P WA + YP IDF YYYA PKS+ P+SLD+VDP+LL TYEKLGIP+REQ
Sbjct: 73 WKGKEEPDWAMVDYPEIDFQKQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLREQM 132
Query: 124 ILAGVQT------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+
Sbjct: 133 ILAGVEGAEEVPAQGRDTGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPE 192
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LVKKYL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERT
Sbjct: 193 LVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERT 252
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+GSYVSYLEGCTAPQRD +QLHAAVVE++A ++AE+KYSTVQNWYPGD GKGGI
Sbjct: 253 LIIADKGSYVSYLEGCTAPQRDTSQLHAAVVEIIAEEDAEVKYSTVQNWYPGDENGKGGI 312
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG S GEFYSIAI+N +QQ D+
Sbjct: 313 YNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGNDSQGEFYSIAITNNWQQADT 372
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAH
Sbjct: 373 GTKMVHLGKNTKSRIVSKGISAGQAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAH 432
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF R+VLQ LPME
Sbjct: 433 TVPYIEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCRDVLQALPME 492
Query: 472 FAVEAQKLIDISLEGSVG 489
FA+EAQ+L+ ISLEGSVG
Sbjct: 493 FAMEAQQLVAISLEGSVG 510
>gi|86606830|ref|YP_475593.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. JA-3-3Ab]
gi|86555372|gb|ABD00330.1| FeS assembly protein SufB [Synechococcus sp. JA-3-3Ab]
Length = 478
Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats.
Identities = 316/479 (65%), Positives = 385/479 (80%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
VR + YKYGF T+I + KGLNEDIIR I AKK EPD+MLE+RL AYR+WL M +
Sbjct: 5 VRTLISQPYKYGFVTDIPSESIGKGLNEDIIRQIWAKKGEPDFMLEFRLRAYRQWLKMSE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+W + YP ID+ ++ YY+APK +SLD+VDP LL T+EKLGIP+ EQ+ LA
Sbjct: 65 PTWPNVSYPPIDYQNIVYYSAPKVQPKKKSLDEVDPVLLETFEKLGIPLSEQKRLA---- 120
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDA+FDSVSV TTF+E+L K G+IF +SEA+ E+P+LV+KYL +VVP+ DN+YAA
Sbjct: 121 -NVAVDAIFDSVSVATTFREKLAKEGIIFCSMSEALREYPELVRKYLGSVVPIADNYYAA 179
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVY+PKGVRCPMELSTYFRIN +GQFERTLIIADEGSYVSYLEGCTAP
Sbjct: 180 LNSAVFSDGSFVYVPKGVRCPMELSTYFRINNGESGQFERTLIIADEGSYVSYLEGCTAP 239
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVEL+ALDNAEIKYSTVQNWY GD GKGGIYNFVTKRG C+G SKISW
Sbjct: 240 MFDTNQLHAAVVELIALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGANSKISW 299
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L GE S GEFYS+A++N +QQ D+GTKM+H+ +NT S+I+SKG
Sbjct: 300 TQVETGSAITWKYPSCVLVGENSVGEFYSVALTNNYQQADTGTKMIHVGRNTRSKIISKG 359
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A +RNF+QCDS+LIG+ C A+T PYIE +N++ +EHEA+
Sbjct: 360 ISAGHSKNSYRGLVKIGPKAEGARNFSQCDSMLIGDQCSANTFPYIEVQNNTAKVEHEAS 419
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI +E LFY RGI E A+++I++GF REV +LPMEFAVEA +L+ + LEGSVG
Sbjct: 420 TSKIGEEQLFYFQSRGIGMEDAVSMIISGFCREVFNQLPMEFAVEADRLLSLKLEGSVG 478
>gi|163736411|ref|ZP_02143830.1| FeS assembly protein SufB [Phaeobacter gallaeciensis BS107]
gi|161390281|gb|EDQ14631.1| FeS assembly protein SufB [Phaeobacter gallaeciensis BS107]
Length = 507
Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats.
Identities = 351/494 (71%), Positives = 409/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ET+I+++ APKGL DI+R IS K EP+WML WRL AY R
Sbjct: 15 QETVDAVREVG-GAYKYGWETDIEMEYAPKGLTTDIVRLISEKNEEPEWMLNWRLEAYDR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL ++P+WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WLQKEEPTWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 134 ILAGVEGAENMPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TVVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGTVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTKM
Sbjct: 314 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 VHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|313675020|ref|YP_004053016.1| iron-regulated ABC transporter membrane component sufb [Marivirga
tractuosa DSM 4126]
gi|312941718|gb|ADR20908.1| Iron-regulated ABC transporter membrane component SufB [Marivirga
tractuosa DSM 4126]
Length = 481
Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats.
Identities = 316/486 (65%), Positives = 390/486 (80%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + + + +Y++G+ + + D AP GLNEDI+RFISAKK EP+W+LEWRL AYR
Sbjct: 1 MSKDDQILEEFASKEYEHGWTVDFEADSAPPGLNEDIVRFISAKKEEPEWLLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W M +P WA + YP +F+D+ YY+APK P+SLD+VDPE+ +T+E+LGI + EQ+
Sbjct: 61 NWRKMAEPKWANVHYPKPEFEDIIYYSAPKPKDKPKSLDEVDPEMRKTFERLGISLTEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L G VAVDAV DSVSV TTFK++L + G+IF SEA+ EHP+LVKKY+ +VVP
Sbjct: 121 RLTG-----VAVDAVMDSVSVGTTFKKQLGELGIIFCSFSEAVKEHPELVKKYIGSVVPS 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNFYAALNSAVF+DGSF YIPKGVRCP+ELSTYFRIN TGQFERTLI+A++ SYVSY
Sbjct: 176 NDNFYAALNSAVFSDGSFCYIPKGVRCPVELSTYFRINAANTGQFERTLIVAEDDSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVE+ A NAE+KYSTVQNWYPGD GKGGIYNFVTKRG C G
Sbjct: 236 LEGCTAPMRDENQLHAAVVEIYAAKNAEVKYSTVQNWYPGDKNGKGGIYNFVTKRGICAG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+KI+WTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++N QQ D+GTKM+H+ KNT
Sbjct: 296 DYAKIAWTQVETGSAVTWKYPSCILKGDYSQGEFYSVAVTNNMQQADTGTKMIHIGKNTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKG+S G S N+YRG V +H+ A +SRNF+QCDSLL+G+ CGAHT PYIE KN S
Sbjct: 356 SRIVSKGVSGGKSQNSYRGLVEIHKRAENSRNFSQCDSLLMGDKCGAHTFPYIEIKNKSA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ +FYC QRGI EE+A+ALIVNG+ +EVL LPMEFAVEAQKL+ ++
Sbjct: 416 QVEHEATTSKIGEDQIFYCQQRGIDEESAVALIVNGYCKEVLNNLPMEFAVEAQKLLALT 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|163741054|ref|ZP_02148446.1| FeS assembly protein SufB [Phaeobacter gallaeciensis 2.10]
gi|161385407|gb|EDQ09784.1| FeS assembly protein SufB [Phaeobacter gallaeciensis 2.10]
Length = 512
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 352/494 (71%), Positives = 410/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ET+I+++ APKGL DI+R IS K EP+WML WRL AY R
Sbjct: 20 QETVDAVREVG-GAYKYGWETDIEMEYAPKGLTTDIVRLISEKNEEPEWMLNWRLEAYDR 78
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL ++P+WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 79 WLQKEEPTWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 138
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 139 ILAGVEGAENMPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKK 198
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TVVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 199 YLGTVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 258
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 259 DKGSYVSYLEGCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 318
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRGE+S GEFYSIAI+N QQ D+GTKM
Sbjct: 319 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGEESQGEFYSIAIANNMQQADTGTKM 378
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 379 VHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPY 438
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 439 IEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 498
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 499 AQQLVAISLEGSVG 512
>gi|110637388|ref|YP_677595.1| cysteine desulfurase activator complex subunit SufB [Cytophaga
hutchinsonii ATCC 33406]
gi|110280069|gb|ABG58255.1| Iron-regulated ABC transporter membrane component SufB [Cytophaga
hutchinsonii ATCC 33406]
Length = 481
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 324/486 (66%), Positives = 399/486 (82%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ + +I +YK+GF T+I D PKGLNED +R+ISAKKNEP+W+LEWRL A+R
Sbjct: 1 MSDSNKILEEITSSEYKWGFVTDIDNDSLPKGLNEDTVRYISAKKNEPEWLLEWRLDAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+WL M++P+W ++YP IDF D+ YY+APK V SLD++DPEL T+EKLGI + EQ+
Sbjct: 61 KWLKMEEPTWPNVKYPKIDFQDIIYYSAPKPKVTLNSLDEIDPELRATFEKLGISLDEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
+ G VAVDAV DSVS+ TTFK +L + G+IF +SEA+ EHP+LV+KYL +VVPV
Sbjct: 121 RMTG-----VAVDAVIDSVSITTTFKGKLSELGIIFCSMSEAVQEHPELVRKYLGSVVPV 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN+YAALNSAVF+DGSF YIPKGVR PMELSTYFRIN TGQFERTL+IADEG+YVSY
Sbjct: 176 TDNYYAALNSAVFSDGSFCYIPKGVRSPMELSTYFRINAANTGQFERTLLIADEGAYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVELVA++ AEIKYSTVQNWYPGD GKGGIYNFVTKRG C G
Sbjct: 236 LEGCTAPVRDENQLHAAVVELVAMEKAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGICAG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+H+ KNT
Sbjct: 296 DYAKISWTQVETGSAVTWKYPSCILKGDHSIGEFYSVAVTNNYQQADTGTKMIHIGKNTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S+N+YRG V V + A +RN++QCDSLL+G+ CGAHT PYIE +N++
Sbjct: 356 SRIVSKGISAGHSHNSYRGLVKVMKRAEGARNYSQCDSLLMGDQCGAHTFPYIEVENNTS 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ +FYC QRGI E A+ALIVNG+ +EVL +LPMEFAVEAQKL+ IS
Sbjct: 416 TVEHEATTSKIGEDQIFYCNQRGIDTEKAVALIVNGYCKEVLNQLPMEFAVEAQKLLAIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|159044180|ref|YP_001532974.1| cysteine desulfurase activator complex subunit SufB
[Dinoroseobacter shibae DFL 12]
gi|157911940|gb|ABV93373.1| sufB [Dinoroseobacter shibae DFL 12]
Length = 503
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 340/490 (69%), Positives = 412/490 (84%), Gaps = 6/490 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RETV+ V+ + ++YK+G+ T+I+++ APKG++EDI+R IS K EP+WM EWRL A+ R
Sbjct: 15 RETVEAVQSVG-ERYKHGWATDIEMEYAPKGIDEDIVRLISEKNEEPEWMTEWRLEAFAR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W +K+P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 74 WKKLKEPKWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLETYKKLGIPLKEQA 133
Query: 124 ILAGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+LAGV+ +VAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKKYL +
Sbjct: 134 LLAGVEAPEEDRRVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIKEHPELVKKYLGS 193
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+YA LNSAVF+DGSFVY+P GV+CPMELSTYFRIN + TGQFERTLIIAD+GS
Sbjct: 194 VVPVSDNYYATLNSAVFSDGSFVYVPPGVKCPMELSTYFRINAENTGQFERTLIIADKGS 253
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRD QLHAAVVE+V L++AE+KYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 254 YVSYLEGCTAPQRDIAQLHAAVVEIVLLEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRA 313
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ + GEFYSIAI+N QQ D+GTKM+HL
Sbjct: 314 DCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDTQGEFYSIAIANNMQQADTGTKMVHLG 373
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRIVSKGISAG + NTYRG VS+H A + RN+TQCDSLLIG+ CGAHT+PYIE +
Sbjct: 374 KNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNGRNYTQCDSLLIGDKCGAHTVPYIEVR 433
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S +EHEATTSK+ ++ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+EAQ+L
Sbjct: 434 NNSSRVEHEATTSKVDEDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEAQQL 493
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 494 VAISLEGSVG 503
>gi|77464010|ref|YP_353514.1| cysteine desulfurase activator complex subunit SufB [Rhodobacter
sphaeroides 2.4.1]
gi|77388428|gb|ABA79613.1| putative SufB [Rhodobacter sphaeroides 2.4.1]
Length = 513
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 343/497 (69%), Positives = 410/497 (82%), Gaps = 13/497 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RET++ + + +YKYG+ET I++D APKGLNEDI+R ISAK +EP+WM EWRL AYRR
Sbjct: 18 RETIETAQAM-AGKYKYGWETEIEMDFAPKGLNEDIVRLISAKNDEPEWMTEWRLQAYRR 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL M++P WA + YP ID+ D+YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 77 WLQMEEPRWAMLDYPEIDYQDIYYYAKPKSMDVKPKSLDEVDPKLLETYKKLGIPLKEQA 136
Query: 124 ILAGVQT-------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
ILAGV+ +VAVDAVFDSVSV TTF++EL K+GVIF ISEA+ EHP+LVKKY
Sbjct: 137 ILAGVEGAEVPDAPRQVAVDAVFDSVSVGTTFQKELAKAGVIFCSISEAVREHPELVKKY 196
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L +VVP DN++A LNSAVF+DGSFVYIP G RCPMELSTYFRIN + TGQFERTLIIAD
Sbjct: 197 LGSVVPQSDNYFATLNSAVFSDGSFVYIPPGTRCPMELSTYFRINAENTGQFERTLIIAD 256
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+YVSYLEGCTAP+RD NQLHAAVVE+V L++AE+KYSTVQNWYPGD +G+GGIYNF
Sbjct: 257 KGAYVSYLEGCTAPKRDTNQLHAAVVEIVVLEDAEVKYSTVQNWYPGDEEGRGGIYNFRW 316
Query: 297 KRGD----CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
R CRG RSK+ WTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAI+N QQ D+G
Sbjct: 317 TRKMPGPDCRGARSKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANNAQQADTG 376
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
TKM+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT
Sbjct: 377 TKMIHLGKNTRSRIVSKGISAGRAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHT 436
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
+PYIE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF +EVLQ LPMEF
Sbjct: 437 VPYIEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEF 496
Query: 473 AVEAQKLIDISLEGSVG 489
A+EAQ L+ ISLEGSVG
Sbjct: 497 AMEAQALVAISLEGSVG 513
>gi|154491952|ref|ZP_02031578.1| hypothetical protein PARMER_01582 [Parabacteroides merdae ATCC
43184]
gi|154088193|gb|EDN87238.1| hypothetical protein PARMER_01582 [Parabacteroides merdae ATCC
43184]
Length = 481
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 316/486 (65%), Positives = 387/486 (79%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ D + ++ YKYGF T+I + +GL+E+ +R ISAKKNEP+W+LE+RL A+R
Sbjct: 1 MEDSNDILNEVTTGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W T++ P+W + P ID+ D+ YYAAPK GP+SLD+VDPEL++T++KLGIP+ E+
Sbjct: 61 HWQTLEMPTWPHLNIPPIDYQDIIYYAAPKKKEGPKSLDEVDPELMKTFDKLGIPLHERA 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ HPDLV+KYL +VV
Sbjct: 121 QLSG-----MAVDAVMDSVSVKTTFKETLAEKGIIFCSFSEAVQHHPDLVQKYLGSVVSY 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ +YVSY
Sbjct: 176 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+VA + AE+KYSTVQNWYPGD GKGGIYNFVTKRG C+G
Sbjct: 236 LEGCTAPMRDENQLHAAIVEIVAHERAEVKYSTVQNWYPGDKDGKGGIYNFVTKRGLCKG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+HL +NT
Sbjct: 296 EGSKISWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTNNYQQADTGTKMIHLGRNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A +RN +QCDSLL+ + CGAHT PY + +N +
Sbjct: 356 STIVSKGISAGHSQNSYRGLVKVSPRAEGARNHSQCDSLLLSSTCGAHTFPYADIQNETA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS+E LFYC QRGI E A+ LIVNG+ REV+ KLPMEFAVEAQKL+ IS
Sbjct: 416 VVEHEATTSKISEEQLFYCRQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|84686884|ref|ZP_01014768.1| FeS assembly protein SufB [Maritimibacter alkaliphilus HTCC2654]
gi|84665081|gb|EAQ11561.1| FeS assembly protein SufB [Rhodobacterales bacterium HTCC2654]
Length = 510
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 354/499 (70%), Positives = 416/499 (83%), Gaps = 14/499 (2%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ETVD V+ + D+YKYG+ET+I+++ APKGL EDI+R IS K +EP+WM EWRL AYR
Sbjct: 13 EQETVDAVKSLG-DKYKYGWETDIEMEYAPKGLTEDIVRLISQKNDEPEWMTEWRLSAYR 71
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
RWL M++P WA + YP I+F D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 72 RWLQMEEPDWAMVEYPEINFQDQYYYARPKSMETKPKSLDEVDPKLLATYEKLGIPLKEQ 131
Query: 123 EILAGVQT------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
ILAGV+ KVAVDAVFDSVSV TTFK+EL+++GVIF ISEAI EHP
Sbjct: 132 MILAGVEGAGEVPADGDNSERKVAVDAVFDSVSVGTTFKKELEQAGVIFCSISEAIREHP 191
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LVKKYL +VVP DNFYA LNSAVF+DGSFVYIP GVRCPMELSTYFRIN + TGQFER
Sbjct: 192 ELVKKYLGSVVPPTDNFYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFER 251
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLIIAD+ +YVSYLEGCTAPQRD QLHAAVVE+V LD+AE+KYSTVQNW+PGD +GKGG
Sbjct: 252 TLIIADKEAYVSYLEGCTAPQRDTAQLHAAVVEIVILDDAEVKYSTVQNWFPGDEEGKGG 311
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
I+NFVTKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG++S GEFYSIAI+N QQ D
Sbjct: 312 IFNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCVLRGDESQGEFYSIAITNNMQQAD 371
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+GTKM HL KNT SRIVSKGISAG SNNTYRG VS+H A +SRN+TQCDSLLIG+ CGA
Sbjct: 372 TGTKMTHLGKNTRSRIVSKGISAGKSNNTYRGLVSMHPKATNSRNYTQCDSLLIGDQCGA 431
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT+PYIE KN S +EHEATTSK+ D+ +FYC QRG+ EE A+ALIVNGF +EVLQ LPM
Sbjct: 432 HTVPYIEVKNPSSRVEHEATTSKVDDDQMFYCRQRGMDEEEAVALIVNGFAKEVLQALPM 491
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFA+EAQ+L+ ISLEGSVG
Sbjct: 492 EFAMEAQQLVAISLEGSVG 510
>gi|75906649|ref|YP_320945.1| cysteine desulfurase activator complex subunit SufB [Anabaena
variabilis ATCC 29413]
gi|75700374|gb|ABA20050.1| Iron-regulated ABC transporter membrane component SufB [Anabaena
variabilis ATCC 29413]
Length = 479
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 310/490 (63%), Positives = 393/490 (80%), Gaps = 12/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P+GL+ED++R ISAKKNEP++MLE+RL
Sbjct: 1 MSAT------VKTLVNQPYKYGFVTDIEADTIPRGLSEDVVRLISAKKNEPEFMLEYRLK 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
A+R+W M +P+W ++YP ID+ ++ YY+APK SLD+VDP L+ T+EKLGIP+
Sbjct: 55 AFRQWQKMTEPTWPSVKYPPIDYQNIIYYSAPKQKKAKLNSLDEVDPTLIETFEKLGIPL 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LA VAVDA+FDSVSV TTFKE+L K GVIF ISEA+ EHP+L+KKYL +
Sbjct: 115 SEQKRLA-----NVAVDAIFDSVSVATTFKEKLAKDGVIFCSISEALQEHPELIKKYLGS 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+ DN++AALN+AVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLI+A+EGS
Sbjct: 170 VVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGS 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP D NQLHAAVVEL+ALDNAEIKYSTVQNWY GD+ GKGGIYNFVTKRG
Sbjct: 230 YVSYLEGCTAPMYDSNQLHAAVVELIALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+
Sbjct: 290 LCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNMQQADTGTKMIHVG 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S+N+YRG V ++ A +RN++QCDS+LIG+N A+T PYI+ +
Sbjct: 350 KNTRSTIISKGISAGQSSNSYRGLVKINPTATGARNYSQCDSMLIGDNAHANTFPYIQVQ 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LF+ QRGI E AI+++++GF ++V +LPMEFAVEA KL
Sbjct: 410 NNTGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKL 469
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 470 LSLKLEGSVG 479
>gi|54296621|ref|YP_122990.1| cysteine desulfurase activator complex subunit SufB [Legionella
pneumophila str. Paris]
gi|53750406|emb|CAH11800.1| hypothetical protein lpp0652 [Legionella pneumophila str. Paris]
Length = 482
Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats.
Identities = 328/487 (67%), Positives = 402/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ +++ + +Y++GF T+I+V+ P GL+ED+IR +SA K EP+++LEWRL A+R
Sbjct: 1 MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM P W+ + YP ID+ + YY+APKS P+SLD+VDPELL+TYEKLGIP+REQ
Sbjct: 61 HWLTMPHPEWSSVHYPPIDYQSVSYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E+LAG VAVDAVFDSVSV TTFK +L + GVIF P+SEA+ ++PDLVKKYL +VVP
Sbjct: 121 EMLAG-----VAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDLVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+P GVRCPMELSTYFRIN TGQFERTLIIAD SYVS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYVPNGVRCPMELSTYFRINAASTGQFERTLIIADVDSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+ALD A+IKYSTVQNWYPGD +GKGGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 GKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG ++N YRG V + A ++RN+TQCDS+L+G+ C AHT PYIE KN +
Sbjct: 356 RSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS+E LFYC QRGI E A+++IVNGF ++VL++LPMEFAVEA KL+ I
Sbjct: 416 AQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGI 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|148360749|ref|YP_001251956.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296106186|ref|YP_003617886.1| ycf24 ABC transporter, permease [Legionella pneumophila 2300/99
Alcoy]
gi|148282522|gb|ABQ56610.1| ABC transporter, permease [Legionella pneumophila str. Corby]
gi|295648087|gb|ADG23934.1| ycf24 ABC transporter, permease [Legionella pneumophila 2300/99
Alcoy]
Length = 482
Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats.
Identities = 329/487 (67%), Positives = 403/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ +++ + +Y++GF T+I+V+ P GL+ED+IR +SA K EP+++LEWRL A+R
Sbjct: 1 MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM P W+ + YP ID+ + YY+APKS P+SLD+VDPELL+TYEKLGIP+REQ
Sbjct: 61 HWLTMPHPEWSSVHYPPIDYQSVSYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E+LAG VAVDAVFDSVSV TTFK +L + GVIF P+SEA+ ++PDLVKKYL +VVP
Sbjct: 121 EMLAG-----VAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDLVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN TGQFERTLIIAD SYVS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIIADVDSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+ALD A+IKYSTVQNWYPGD +GKGGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 GKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG ++N YRG V + A ++RN+TQCDS+L+G+ C AHT PYIE KN +
Sbjct: 356 RSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS+E LFYC QRGI E A+++IVNGF ++VL++LPMEFAVEA KL+ I
Sbjct: 416 AQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGI 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|259417024|ref|ZP_05740944.1| FeS assembly protein SufB [Silicibacter sp. TrichCH4B]
gi|259348463|gb|EEW60240.1| FeS assembly protein SufB [Silicibacter sp. TrichCH4B]
Length = 506
Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats.
Identities = 349/493 (70%), Positives = 410/493 (83%), Gaps = 11/493 (2%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
ETVD VR++ YKYG++T+I+++ APKG+N DI+R IS K EP+WM EWRL A+ RW
Sbjct: 16 ETVDAVREV--STYKYGWDTDIEMEYAPKGVNPDIVRLISEKNEEPEWMTEWRLQAFERW 73
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEI 124
MK+P+WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ I
Sbjct: 74 QGMKEPNWAMVNYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQMI 133
Query: 125 LAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
LAGV+ KVAVDAVFDSVSV TTF+EELKK+GVIF ISEAI EHP+LVKKY
Sbjct: 134 LAGVEGAEDAPSEGRKVAVDAVFDSVSVGTTFQEELKKAGVIFCSISEAIREHPELVKKY 193
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIAD
Sbjct: 194 LGTVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIAD 253
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNW+PGD GKGGIYNFVT
Sbjct: 254 KGSYVSYLEGCTAPQRDTAQLHAAVVEIIVEEDAEVKYSTVQNWFPGDENGKGGIYNFVT 313
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTKM+
Sbjct: 314 KRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKMI 373
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HL K+T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PYI
Sbjct: 374 HLGKDTKSRIVSKGISAGKAQNTYRGLVSMHPKAKSSRNYTQCDSLLIGDKCGAHTVPYI 433
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E KN+S EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+EA
Sbjct: 434 EVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAMEA 493
Query: 477 QKLIDISLEGSVG 489
Q+L+ ISLEGSVG
Sbjct: 494 QQLVAISLEGSVG 506
>gi|254293807|ref|YP_003059830.1| cysteine desulfurase activator complex subunit SufB [Hirschia
baltica ATCC 49814]
gi|254042338|gb|ACT59133.1| FeS assembly protein SufB [Hirschia baltica ATCC 49814]
Length = 512
Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats.
Identities = 352/496 (70%), Positives = 418/496 (84%), Gaps = 11/496 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ TVD R ++ D Y GF T+I+ + APKGL+E+ +RFISAKKNEP+WMLEWRL AY R
Sbjct: 17 QATVDAARALESDNYNAGFTTDIEQEFAPKGLSEETVRFISAKKNEPEWMLEWRLQAYER 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
WLTM++P WA + YP ID+ D YYYAAPK +S+DDV E+L TY+KLGIP+RE E+
Sbjct: 77 WLTMEEPDWAMVNYPKIDYQDAYYYAAPKGQTKYESIDDVPEEILETYKKLGIPLREAEV 136
Query: 125 LAGVQT-----------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
L GV+ ++AVDAVFDSVSVVTTF++ELKK+GVIFM ISEAI E+P+LV
Sbjct: 137 LLGVEGAAESAAEAREKPRIAVDAVFDSVSVVTTFQKELKKAGVIFMSISEAIVEYPELV 196
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
KKYL TVVP DNF+A LN AVF+DG+FVYIPKGVRCPMELSTYFR+N +GTGQFERTLI
Sbjct: 197 KKYLGTVVPQSDNFFATLNCAVFSDGTFVYIPKGVRCPMELSTYFRMNAQGTGQFERTLI 256
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IADEG+YVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNW+PGD+ GKGG+YN
Sbjct: 257 IADEGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWWPGDADGKGGVYN 316
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRGDCRG RSKISWTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIA++NG QQ D+GT
Sbjct: 317 FVTKRGDCRGKRSKISWTQVETGSAVTWKYPSCILRGDDSVGEFYSIAVTNGHQQADTGT 376
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+HL + T SRI+SKG+SAG SN+TYRG VSV A SRNFTQCDSLLIG CGAHT+
Sbjct: 377 KMIHLGERTKSRIISKGVSAGKSNSTYRGLVSVGGKAKGSRNFTQCDSLLIGQTCGAHTV 436
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIE+K + LEHEATT+++S++ LFYC QRG+ EE A+AL+VNGFVR+V+QKLPMEFA
Sbjct: 437 PYIENKRADAQLEHEATTTRLSEDQLFYCRQRGLGEEEAVALLVNGFVRDVIQKLPMEFA 496
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+++SLEGSVG
Sbjct: 497 VEAQKLLEVSLEGSVG 512
>gi|37520939|ref|NP_924316.1| cysteine desulfurase activator complex subunit SufB [Gloeobacter
violaceus PCC 7421]
gi|35211934|dbj|BAC89311.1| ycf24 [Gloeobacter violaceus PCC 7421]
Length = 482
Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats.
Identities = 331/490 (67%), Positives = 400/490 (81%), Gaps = 9/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M +T++++ +Y+YGF T+I+ + P GL+E++IR ISAKK EP++MLEWRL
Sbjct: 1 MTTSTQTIEQLAG---KEYQYGFVTDIEQETVPPGLSEEVIRLISAKKQEPEFMLEWRLK 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPI 119
AYR WL+M P WA + YP ID+ ++ YYAA K GP+SLD+VDPELLRTYEKLGIP+
Sbjct: 58 AYRHWLSMTTPEWANVHYPPIDYQNIVYYAALKPKTDGPKSLDEVDPELLRTYEKLGIPL 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+E+ LAG VAVDAVFDSVSV TTFK++L G+IF SEA+ EHP+LV+KYL +
Sbjct: 118 QERAALAG-----VAVDAVFDSVSVATTFKDKLGAMGIIFCSFSEAVREHPELVRKYLGS 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP GDNFYAALNSAVFTDGSFVY+PKGVRCPMELSTYFRIN K TGQFERTLIIAD GS
Sbjct: 173 VVPTGDNFYAALNSAVFTDGSFVYVPKGVRCPMELSTYFRINAKNTGQFERTLIIADAGS 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAAVVEL+A D+A IKYSTVQNWYPGD +GKGGIYNFVTKRG
Sbjct: 233 YVSYLEGCTAPMRDENQLHAAVVELIAHDDATIKYSTVQNWYPGDKEGKGGIYNFVTKRG 292
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G SKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 293 RCEGRNSKISWTQVETGSAITWKYPSCILKGDNSVGEFYSVALTNNYQQADTGTKMIHIG 352
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGISAG NTYRG V + GA +RN++QCDSLLIG +CGAHT PYI+ +
Sbjct: 353 KNTKSTIVSKGISAGHGQNTYRGAVKILSGADGARNYSQCDSLLIGEDCGAHTFPYIDVQ 412
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEA+TSKI ++ +FYC QRGI E A+++IVNGF +EV ++LPMEFAVEAQKL
Sbjct: 413 NPTARMEHEASTSKIGEDQIFYCNQRGIATEDAVSMIVNGFCKEVFRELPMEFAVEAQKL 472
Query: 480 IDISLEGSVG 489
+++SLEGSVG
Sbjct: 473 LEVSLEGSVG 482
>gi|83952082|ref|ZP_00960814.1| FeS assembly protein SufB [Roseovarius nubinhibens ISM]
gi|83837088|gb|EAP76385.1| FeS assembly protein SufB [Roseovarius nubinhibens ISM]
Length = 507
Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats.
Identities = 349/494 (70%), Positives = 409/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ T+I+++ APKGL DI+R IS K EP WM EWRL AY R
Sbjct: 15 QETVDAVREVG-GAYKYGWNTDIEMEYAPKGLTPDIVRLISEKNEEPAWMTEWRLEAYER 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT ++P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WLTKEEPDWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 134 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRD +QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPQRDTSQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+KI WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 314 TKRADCRGDRAKIMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG++CGAHT+PY
Sbjct: 374 IHLGKRTKSRIVSKGISAGRAQNTYRGLVSMHPKAKESRNYTQCDSLLIGSDCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ +FYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQMFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|313204298|ref|YP_004042955.1| iroN-regulated ABC transporter membrane component sufb
[Paludibacter propionicigenes WB4]
gi|312443614|gb|ADQ79970.1| Iron-regulated ABC transporter membrane component SufB
[Paludibacter propionicigenes WB4]
Length = 478
Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats.
Identities = 321/481 (66%), Positives = 390/481 (81%), Gaps = 6/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D + ++ YKYGF T+I+ D P GL+E+++R ISAKKNEP+WMLE+RL AYR WLTM
Sbjct: 4 DILDQVTQGDYKYGFTTDIETDIIPIGLSEEVVRLISAKKNEPEWMLEFRLKAYRHWLTM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+ P+WA + P ID+ + YYAAP+ P+SLD+VDPELL+T+EKLGIP+ E+ L+G+
Sbjct: 64 EMPTWAHLTVPEIDYQSISYYAAPR-KNAPKSLDEVDPELLKTFEKLGIPLHERMALSGI 122
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
AVDAV DSVSV TTFKE L + G+IF SEA+ HPDLV+KY+S+VVP DNF+
Sbjct: 123 -----AVDAVMDSVSVKTTFKESLSELGIIFCSFSEAVEHHPDLVQKYMSSVVPYTDNFF 177
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A LN AVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADE SYVSYLEGCT
Sbjct: 178 ATLNCAVFSDGSFVYIPKGVRCPMELSTYFRINAMNTGQFERTLIVADEDSYVSYLEGCT 237
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDENQLHAA+VE+VA+ NAE+KYSTVQNWYPGD GKGGIYNFVTKRG C+G SKI
Sbjct: 238 APMRDENQLHAAIVEIVAMKNAEVKYSTVQNWYPGDKDGKGGIYNFVTKRGICKGDNSKI 297
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSA+TWKYPSC+L G+ S EFYS+A++N QQ D+GTKMLH+ KNT+S I+S
Sbjct: 298 SWTQVETGSAVTWKYPSCILLGDNSSAEFYSVAVTNHHQQADTGTKMLHIGKNTSSHILS 357
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG V V+ A ++RNF+QCDSLL+G+ CGAHT PY+E N + +EHE
Sbjct: 358 KGISAGKSQNSYRGLVKVNPAAENARNFSQCDSLLLGDKCGAHTFPYMEVNNDTAIVEHE 417
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKI+++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ I+LEGSV
Sbjct: 418 ATTSKINEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLQITLEGSV 477
Query: 489 G 489
G
Sbjct: 478 G 478
>gi|255036336|ref|YP_003086957.1| cysteine desulfurase activator complex subunit SufB [Dyadobacter
fermentans DSM 18053]
gi|254949092|gb|ACT93792.1| FeS assembly protein SufB [Dyadobacter fermentans DSM 18053]
Length = 481
Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats.
Identities = 329/486 (67%), Positives = 393/486 (80%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + + + +I +YKYGF T+I+ D+AP GL++DI+RFISAKKNEP+WML+WRL AY
Sbjct: 1 MSKEEELLEEITSSEYKYGFVTDIEADEAPAGLSDDIVRFISAKKNEPEWMLQWRLKAYH 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLTM +P W + YP I+F + YY+APK +S+DD+DPEL T+E+LGI + EQ+
Sbjct: 61 LWLTMDEPKWPNVHYPPIEFQAIKYYSAPKKKKAVESIDDIDPELRNTFERLGISLNEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
++G+ AVDAV DS SV TTFK+ LK+ G+IF ISEAI EHP+LVKKYL +VVP
Sbjct: 121 RISGI-----AVDAVMDSESVFTTFKDTLKEKGIIFCSISEAIREHPELVKKYLGSVVPP 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN+YAALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN GTGQFERTLII DE S+VSY
Sbjct: 176 KDNYYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAGTGQFERTLIIGDEDSHVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVE+ A DNA +KYSTVQNWYPGD GKGGIYNFVTKRG C G
Sbjct: 236 LEGCTAPMRDENQLHAAVVEIFAHDNANVKYSTVQNWYPGDKDGKGGIYNFVTKRGLCDG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N QQ D+GTKM+H+ KNT
Sbjct: 296 PNSKISWTQVETGSAITWKYPSVILKGDNSIGEFYSVAVTNNMQQADTGTKMIHIGKNTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S N+YRG V V + A +RNF+QCDSLL+G+ CGAHT PYIE N S
Sbjct: 356 SRIVSKGISAGKSQNSYRGLVQVFKKAEKARNFSQCDSLLLGDKCGAHTFPYIEVNNPSA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ LFYC QRGIP E A+ALIVNG+ +EVL +LPMEFAVEAQKL++IS
Sbjct: 416 TVEHEATTSKIGEDILFYCNQRGIPTEQAVALIVNGYAKEVLNQLPMEFAVEAQKLLEIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|254510950|ref|ZP_05123017.1| FeS assembly protein SufB [Rhodobacteraceae bacterium KLH11]
gi|221534661|gb|EEE37649.1| FeS assembly protein SufB [Rhodobacteraceae bacterium KLH11]
Length = 507
Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats.
Identities = 345/494 (69%), Positives = 413/494 (83%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ET I+++ APKG+N DI+R IS K +EP+WM EWRL A+ R
Sbjct: 15 QETVDAVREVG-GAYKYGWETEIEMEYAPKGVNPDIVRLISDKNDEPEWMTEWRLAAFER 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W M++P+WA + YP IDF + YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WTKMEEPNWAMVNYPEIDFQNQYYYARPKSMEEKPKSLDEVDPKLLATYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF++ELK++GVIF ISEAI EHP+LVKK
Sbjct: 134 ILAGVEGAENAPAEGRKVAVDAVFDSVSVGTTFQKELKEAGVIFCSISEAIKEHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNW+PGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPQRDTAQLHAAVVEIIIEEDAEVKYSTVQNWFPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N +QQ D+GTKM
Sbjct: 314 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNYQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG V++H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 VHLGKNTKSRIVSKGISAGKAQNTYRGLVAMHPKAKDSRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE +N+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 434 IEVRNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|307609397|emb|CBW98886.1| hypothetical protein LPW_06731 [Legionella pneumophila 130b]
Length = 482
Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats.
Identities = 328/487 (67%), Positives = 404/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ +++ + +Y++GF T+I+V+ P GL+ED+IR +SA K EP+++LEWRL A+R
Sbjct: 1 MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM+ P W+ + YP ID+ + YY+APKS P+SLD+VDPELL+TYEKLGIP+REQ
Sbjct: 61 HWLTMQHPEWSSVHYPPIDYQSISYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E+LAG VAVDAVFDSVSV TTFK +L + GVIF P+SEA+ ++PDLVKKYL +VVP
Sbjct: 121 EMLAG-----VAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDLVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN TGQFERTLI+AD SYVS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIVADVDSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+ALD A+IKYSTVQNWYPGD +GKGGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 GKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG ++N YRG V + A ++RN+TQCDS+L+G+ C AHT PYIE KN +
Sbjct: 356 RSTIISKGISAGRAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS+E LFYC QRGI E A+++IVNGF ++VL++LPMEFAVEA KL+ I
Sbjct: 416 AQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGI 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|294677418|ref|YP_003578033.1| FeS assembly protein SufB [Rhodobacter capsulatus SB 1003]
gi|294476238|gb|ADE85626.1| FeS assembly protein SufB [Rhodobacter capsulatus SB 1003]
Length = 504
Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats.
Identities = 345/494 (69%), Positives = 413/494 (83%), Gaps = 11/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RETV+ V+ + YKYG+ET I+++ APKG++EDI+R ISAK NEPDWMLEWRL AYRR
Sbjct: 13 RETVETVQNM--GSYKYGWETEIEMEYAPKGISEDIVRLISAKNNEPDWMLEWRLEAYRR 70
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQE 123
W+ M+ P WA ++ P ID+ DLYYYA PKS+ P+SL++VDP+LL TYEKLGIP++EQ
Sbjct: 71 WVEMEMPDWALLKLPEIDYQDLYYYARPKSMVEKPKSLEEVDPKLLATYEKLGIPLKEQM 130
Query: 124 ILAGVQ--------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ +VAVDAVFDSVSV TTFKE+L ++GVIF ISEAI EHP+LVK+
Sbjct: 131 ILAGVEGAENIDLSNRQVAVDAVFDSVSVGTTFKEKLAEAGVIFCSISEAIKEHPELVKQ 190
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TVVP DNF+A LN AVF+DGSFVY+P G RCPMELSTYFRIN + TGQFERTLII
Sbjct: 191 YLGTVVPQTDNFFATLNCAVFSDGSFVYVPPGTRCPMELSTYFRINAENTGQFERTLIIC 250
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+G+YVSYLEGCTAP+RD QLHAAVVE+V L+++E+KYSTVQNW+PGD +GKGGIYNFV
Sbjct: 251 DKGAYVSYLEGCTAPKRDTAQLHAAVVEIVVLEDSEVKYSTVQNWFPGDEEGKGGIYNFV 310
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSAITWKYPSC+LRG++S GEFYSIAI+N +QQ D+GTKM
Sbjct: 311 TKRADCRGARAKVMWTQVETGSAITWKYPSCILRGDESQGEFYSIAIANNYQQADTGTKM 370
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 371 VHLGKNTRSRIVSKGISAGQAQNTYRGLVSMHPRAKNSRNYTQCDSLLIGDKCGAHTVPY 430
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF REVLQ LPMEFA+E
Sbjct: 431 IEVKNNSSRVEHEATTSKVDDDQLFYCRARGVGEEEAVALVVNGFCREVLQALPMEFAME 490
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 491 AQSLVAISLEGSVG 504
>gi|284038484|ref|YP_003388414.1| FeS assembly protein SufB [Spirosoma linguale DSM 74]
gi|283817777|gb|ADB39615.1| FeS assembly protein SufB [Spirosoma linguale DSM 74]
Length = 497
Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats.
Identities = 329/497 (66%), Positives = 393/497 (79%), Gaps = 11/497 (2%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + D + I +YKYGFET I+ D+AP GL+E IRFISAKKNEPDW+LE RL A+R
Sbjct: 1 MSKDADILESITNSEYKYGFETLIEADEAPVGLDESTIRFISAKKNEPDWLLENRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W M +P W + YP ID+ + YY+APK SLD++DPELL T+ +LGI + EQ+
Sbjct: 61 MWQEMTEPKWPNVSYPKIDYQAIKYYSAPKQKKTVNSLDEIDPELLDTFNRLGISLVEQK 120
Query: 124 ILAGV-----------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
LAGV +VAVDAV DSVSV TTFK++L + G+IF ISEA+ EHP+L
Sbjct: 121 RLAGVVDSSPLDTAPGDRPRVAVDAVMDSVSVATTFKKDLAERGIIFCSISEAVHEHPEL 180
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
VKKY+ +VVP DN++AALN+AVFTDGSF YIPKGVRCPMELSTYFRIN GTGQFERTL
Sbjct: 181 VKKYMGSVVPAKDNYFAALNAAVFTDGSFCYIPKGVRCPMELSTYFRINAAGTGQFERTL 240
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+ADEGSYVSYLEGCTAP RDENQLHAAVVELVA+ NAEIKYSTVQNWYPGD GKGGIY
Sbjct: 241 IVADEGSYVSYLEGCTAPMRDENQLHAAVVELVAMGNAEIKYSTVQNWYPGDKDGKGGIY 300
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
NFVTKRG C G +KISWTQ+ETGS+ITWKYPS +L+G+ S GEFYS+A++N QQ D+G
Sbjct: 301 NFVTKRGICDGPNAKISWTQVETGSSITWKYPSVILKGDNSIGEFYSVAVTNNMQQADTG 360
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
TKM+H+ KNT SRIVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT
Sbjct: 361 TKMIHIGKNTKSRIVSKGISAGKSQNSYRGLVQVMKRAENARNYSQCDSLLLGDKCGAHT 420
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY+E N S +EHEATTSKI ++ LFYC QRGIP E A+ALI+NG+ +EVL +LPMEF
Sbjct: 421 FPYLEVSNPSATVEHEATTSKIGEDQLFYCNQRGIPTEQAVALIINGYAKEVLNQLPMEF 480
Query: 473 AVEAQKLIDISLEGSVG 489
AVEAQKL+ ISLEGSVG
Sbjct: 481 AVEAQKLLAISLEGSVG 497
>gi|83942221|ref|ZP_00954682.1| FeS assembly protein SufB [Sulfitobacter sp. EE-36]
gi|83846314|gb|EAP84190.1| FeS assembly protein SufB [Sulfitobacter sp. EE-36]
Length = 512
Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats.
Identities = 349/494 (70%), Positives = 410/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ T+I++D AP GLN DI++ IS K EP+WMLEWRL AY R
Sbjct: 20 QETVDAVREVG-GAYKYGWSTDIEMDYAPLGLNADIVKLISEKNEEPEWMLEWRLAAYER 78
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT K+P+WA + YP IDF YYYA PKS+ P+SLDDVDP+LL TY+KLGIP++EQ
Sbjct: 79 WLTKKEPNWAMVDYPEIDFQQQYYYARPKSMAEKPKSLDDVDPKLLETYKKLGIPLKEQA 138
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF++ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 139 ILAGVEGAEKIGDEPRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIREHPELVKK 198
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 199 YLGSVVPVNDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 258
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRDE+QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 259 DKGSYVSYLEGCTAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEDGKGGIYNFV 318
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 319 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 378
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG V++H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 379 IHLGKRTKSRIVSKGISAGKAQNTYRGLVTMHPKAKESRNYTQCDSLLIGDKCGAHTVPY 438
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 439 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAME 498
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 499 AQALVAISLEGSVG 512
>gi|149202629|ref|ZP_01879601.1| component of SufBCD complex [Roseovarius sp. TM1035]
gi|149143911|gb|EDM31945.1| component of SufBCD complex [Roseovarius sp. TM1035]
Length = 507
Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats.
Identities = 348/494 (70%), Positives = 414/494 (83%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ + YKYG+ T+I++D AP GLNEDI+R IS+K EP+WM EWRL AYRR
Sbjct: 15 QETVDAVRQVG-EAYKYGWNTDIEMDYAPLGLNEDIVRLISSKNEEPEWMTEWRLEAYRR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT +P WA + YP IDF YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WLTKTEPEWAMVDYPKIDFQAQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQL 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF++EL+++GVIF ISEAI EHP+LVKK
Sbjct: 134 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQKELRQAGVIFCSISEAIREHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP+RD +QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPKRDTSQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N +QQ D+GTKM
Sbjct: 314 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNYQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 IHLGKNTRSRIVSKGISAGHAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ +FYC RG+ EE A+AL+VNGF R+VLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQMFYCRARGMDEEEAVALVVNGFCRDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|53804894|ref|YP_113470.1| cysteine desulfurase activator complex subunit SufB [Methylococcus
capsulatus str. Bath]
gi|53758655|gb|AAU92946.1| FeS assembly protein SufB [Methylococcus capsulatus str. Bath]
Length = 481
Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats.
Identities = 336/489 (68%), Positives = 402/489 (82%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A ET+D+ + YK GF T ++ D P GLNED+IR IS KKNEP++MLEWRL
Sbjct: 1 MSATAETLDR---LIKQDYKPGFVTELETDTLPPGLNEDVIRAISKKKNEPEFMLEWRLS 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WLTM +P WA + Y +D+ + YY+APK+ P+SLD+VDP+LL TY KLGIP+
Sbjct: 58 AYRHWLTMMEPHWAFVEYAPVDYQAISYYSAPKTTDHPKSLDEVDPKLLETYNKLGIPLY 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQE LAG VAVDAVFDSVSV TTFK++L ++GVIF +SEAI +HPDLV++YL +V
Sbjct: 118 EQEKLAG-----VAVDAVFDSVSVATTFKDKLAQAGVIFCSMSEAIEKHPDLVRQYLGSV 172
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP GDNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADEGSY
Sbjct: 173 VPAGDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAKTGQFERTLIVADEGSY 232
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVAL+ A+IKYSTVQNWYPGD +G+GGIYNFVTKRGD
Sbjct: 233 VSYLEGCTAPMRDENQLHAAVVELVALEGAQIKYSTVQNWYPGDEEGRGGIYNFVTKRGD 292
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++N QQ D+GTKM+H+ K
Sbjct: 293 CRGARSKISWTQVETGSAITWKYPSCILRGDDSVGEFYSVAVTNHRQQADTGTKMIHIGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG + N+YRG V + + A ++RN+TQCDSLLIG+ CGAHT PYIE K
Sbjct: 353 NTKSTIISKGISAGRAQNSYRGLVKILKSAENARNYTQCDSLLIGDRCGAHTFPYIEVKQ 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTSKIS++ LF+C QRG+ E A+++IVNGF ++V ++LPMEFAVEAQ L+
Sbjct: 413 PSAQVEHEATTSKISEDQLFFCQQRGLSAEDAVSMIVNGFCKQVFKELPMEFAVEAQALL 472
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 473 GISLEGSVG 481
>gi|159027406|emb|CAO86890.1| sufB [Microcystis aeruginosa PCC 7806]
Length = 480
Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats.
Identities = 311/490 (63%), Positives = 388/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ + P+GLNE+IIR ISAKK EP++ML++RL
Sbjct: 1 MSAT-----TVKNLVNQPYKYGFITDIESETIPRGLNEEIIRLISAKKKEPEFMLDFRLR 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AY +W M +PSW + YPAID+ ++ YY+APK SL++VDP L+ T+EKLGIP+
Sbjct: 56 AYHQWQKMTEPSWPHVSYPAIDYQNIIYYSAPKQKKAKLNSLEEVDPTLIETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDA+FDSVS+ TTFKE+L + GVIF ISEA+ EHPDLV+KYL +
Sbjct: 116 SEQKRLS-----NVAVDAIFDSVSIATTFKEKLAEQGVIFCSISEALQEHPDLVQKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPVGDN++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 171 VVPVGDNYFAALNSAVFSDGSFVFIPKGVVCPMELSTYFRINNGETGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNWY GD+ GKGGIYNFVTKRG
Sbjct: 231 SVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDANGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+NT S I+SKGISAG S N+YRG V + A +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 RNTKSTIISKGISAGNSQNSYRGLVKMGPKAKGARNYSQCDSMLIGDNAEANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S +EHEA+TSKI ++ LFY QRGI EE A++++V+GF ++VL KLPMEFA EA KL
Sbjct: 411 NNSAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLSKLPMEFAAEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|17229984|ref|NP_486532.1| cysteine desulfurase activator complex subunit SufB [Nostoc sp. PCC
7120]
gi|17131584|dbj|BAB74191.1| alr2492 [Nostoc sp. PCC 7120]
Length = 479
Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats.
Identities = 310/490 (63%), Positives = 392/490 (80%), Gaps = 12/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P+GL+ED++R IS KKNEP++MLE+RL
Sbjct: 1 MSAT------VKTLVNQPYKYGFVTDIEADTIPRGLDEDVVRLISTKKNEPEFMLEFRLR 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
A+R+W M +P+W ++YP ID+ ++ YY+APK SLD+VDP L+ T+EKLGIP+
Sbjct: 55 AFRQWQKMTEPTWPSVKYPPIDYQNIIYYSAPKQKKAKLNSLDEVDPTLIETFEKLGIPL 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LA VAVDA+FDSVSV TTFKE+L K GVIF ISEA+ EHP+L+KKYL +
Sbjct: 115 SEQKRLA-----NVAVDAIFDSVSVATTFKEKLAKDGVIFCSISEALQEHPELIKKYLGS 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+ DN++AALN+AVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLI+A+EGS
Sbjct: 170 VVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGS 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP D NQLHAAVVELVALDNAEIKYSTVQNWY GD+ GKGGIYNFVTKRG
Sbjct: 230 YVSYLEGCTAPMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+
Sbjct: 290 LCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNMQQADTGTKMIHIG 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S+N+YRG V ++ A +RN++QCDS+LIG+N A+T PYI+ +
Sbjct: 350 KNTRSTIISKGISAGQSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAHANTFPYIQVQ 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LF+ QRGI E AI+++++GF ++V +LPMEFAVEA KL
Sbjct: 410 NNTGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKL 469
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 470 LSLKLEGSVG 479
>gi|110679916|ref|YP_682923.1| cysteine desulfurase activator complex subunit SufB [Roseobacter
denitrificans OCh 114]
gi|109456032|gb|ABG32237.1| FeS assembly protein SufB [Roseobacter denitrificans OCh 114]
Length = 512
Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats.
Identities = 341/494 (69%), Positives = 409/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD VR++ +YK+G+ T+I+++ APKGL+ +I+R IS K EP+WMLEWRL AY R
Sbjct: 20 QDTVDAVREVG-GKYKHGWSTDIEMEYAPKGLSPEIVRLISEKNEEPEWMLEWRLAAYER 78
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL +P WA + YP IDF D YYYA PKS+ P+SLDDVDP+LL TY+KLGIP++EQ
Sbjct: 79 WLQKSEPKWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDDVDPKLLETYQKLGIPLKEQM 138
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVS+ TTF++EL K+GVIF ISEAI +HP+LVKK
Sbjct: 139 ILAGVEGAEELTDEPRKVAVDAVFDSVSLGTTFRDELMKAGVIFCSISEAIKDHPELVKK 198
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DN+YA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 199 YLGSVVPVSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 258
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNWYPGD +GKGGIYNFV
Sbjct: 259 DKGSYVSYLEGCTAPQRDIAQLHAAVVEIIVEEDAEVKYSTVQNWYPGDEEGKGGIYNFV 318
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 319 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 378
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 379 IHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPY 438
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 439 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAME 498
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 499 AQQLVAISLEGSVG 512
>gi|260428090|ref|ZP_05782069.1| FeS assembly protein SufB [Citreicella sp. SE45]
gi|260422582|gb|EEX15833.1| FeS assembly protein SufB [Citreicella sp. SE45]
Length = 517
Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats.
Identities = 347/506 (68%), Positives = 409/506 (80%), Gaps = 22/506 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ETVD V I YKYG+ET+I+++ APKG+N DI+R IS K EP+WM EWRL A+
Sbjct: 14 EQETVDAVEAI--STYKYGWETDIEMEYAPKGVNPDIVRLISEKNEEPEWMTEWRLKAFE 71
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQ 122
RW MK+P+WA + YP IDF + YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 72 RWTQMKEPTWAMVDYPEIDFQEQYYYARPKSMATKPKSLDEVDPKLLATYEKLGIPLKEQ 131
Query: 123 EILAGVQT-------------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
ILAGV+ +VAVDAVFDSVSV TTFK+EL+K+GVIF IS
Sbjct: 132 MILAGVEGADDAPADAAGALSATAGSDRRVAVDAVFDSVSVGTTFKKELEKAGVIFCSIS 191
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI EHP+LVKKYL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN +
Sbjct: 192 EAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAE 251
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERTLIIAD+GSYVSYLEGCTAP+RD QLHAAVVE++ ++AE+KYSTVQNW+PG
Sbjct: 252 NTGQFERTLIIADKGSYVSYLEGCTAPKRDTAQLHAAVVEIIVEEDAEVKYSTVQNWFPG 311
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D GKGGIYNFVTKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+
Sbjct: 312 DENGKGGIYNFVTKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIA 371
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
N QQ D+GTKM+HL K+T SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLL
Sbjct: 372 NNHQQADTGTKMIHLGKDTRSRIVSKGISAGVAQNTYRGLVSMHPKAKNSRNYTQCDSLL 431
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG+ CGAHT+PYIE KN+S EHEATTSK+ DE LFYC QRG+ EE A+AL+VNGF +E
Sbjct: 432 IGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDDEQLFYCRQRGMDEEEAVALVVNGFCKE 491
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
VLQ LPMEFA+EAQ L+ ISLEGSVG
Sbjct: 492 VLQALPMEFAMEAQALVAISLEGSVG 517
>gi|262277360|ref|ZP_06055153.1| FeS assembly protein SufB [alpha proteobacterium HIMB114]
gi|262224463|gb|EEY74922.1| FeS assembly protein SufB [alpha proteobacterium HIMB114]
Length = 483
Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats.
Identities = 346/490 (70%), Positives = 409/490 (83%), Gaps = 8/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A E + + + D +Y +GF T+I + PKGL+E+ IRFIS +K EP WML+WRL
Sbjct: 1 MSASDEIIQQYQ--DRSEYDHGFVTDIDTIEVPKGLSEETIRFISKQKKEPQWMLDWRLN 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPI 119
AY R M++P W + +YP I++ DLYYY+APKS GP+SLD++DPE+ +TY+KLGIP+
Sbjct: 59 AYNRLQKMEEPDWQKPKYPKINYQDLYYYSAPKSFKDGPKSLDEIDPEIKKTYDKLGIPL 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+G VAVDAVFDSVSV TTFK++LK+ GVIF ISEA EHP+LVKKYL +
Sbjct: 119 EEQKRLSG-----VAVDAVFDSVSVATTFKDKLKEIGVIFCSISEATREHPELVKKYLGS 173
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PV D+F+A LNSAVFTDGSFVYIP GVRCPMELSTYFRIN + TGQFERTLIIAD+ S
Sbjct: 174 VIPVTDHFFATLNSAVFTDGSFVYIPPGVRCPMELSTYFRINAQNTGQFERTLIIADKDS 233
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA VELVALD AEIKYSTVQNWYPGD +GKGGIYNFVTKRG
Sbjct: 234 YVSYLEGCTAPMRDENQLHAANVELVALDGAEIKYSTVQNWYPGDKEGKGGIYNFVTKRG 293
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+AI+N FQ+ D+GTKM+HL
Sbjct: 294 DCRGKNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSVAITNNFQKADTGTKMIHLG 353
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S+I+SKGISAG ++NTYRG VSVH A S+NFTQCDSLL+GN CGAHT+PYIE+K
Sbjct: 354 KNTKSKIISKGISAGQADNTYRGLVSVHPKATGSKNFTQCDSLLVGNKCGAHTVPYIENK 413
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NSS +EHEATTSKISD+ LFYC QRG+ +E A++LIVNGF +EVLQ+LPMEFAVEAQKL
Sbjct: 414 NSSSEVEHEATTSKISDDQLFYCRQRGLNQEEAVSLIVNGFCKEVLQQLPMEFAVEAQKL 473
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 474 VGISLEGSVG 483
>gi|52840838|ref|YP_094637.1| cysteine desulfurase activator complex subunit SufB [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52627949|gb|AAU26690.1| ABC transporter, permease [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 482
Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats.
Identities = 326/487 (66%), Positives = 401/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ +++ + +Y++GF T+I+V+ P GL+ED+IR +SA K EP+++LEWRL A+R
Sbjct: 1 MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM P W+ + Y ID+ + YY+APKS P+SLD+VDPELL+TYEKLGIP+REQ
Sbjct: 61 HWLTMPHPEWSSVHYLPIDYQSISYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E+LAG VAVDAVFDSVSV TTFK +L + GVIF P+SEA+ ++PDLVKKYL +VVP
Sbjct: 121 EMLAG-----VAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDLVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVY+P GVRCPMELSTYFRIN TGQFERTLI+AD SYVS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYVPNGVRCPMELSTYFRINAASTGQFERTLIVADVDSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+ALD A+IKYSTVQNWYPGD +GKGGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 GKKSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG ++N YRG V + A ++RN+TQCDS+L+G+ C AHT PYIE KN +
Sbjct: 356 RSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS+E LFYC QRGI E A+++IVNGF ++VL++LPMEFAVEA KL+ I
Sbjct: 416 AQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGI 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|83955456|ref|ZP_00964087.1| FeS assembly protein SufB [Sulfitobacter sp. NAS-14.1]
gi|83840100|gb|EAP79275.1| FeS assembly protein SufB [Sulfitobacter sp. NAS-14.1]
Length = 515
Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats.
Identities = 348/494 (70%), Positives = 410/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG+ T+I++D AP GLN DI++ IS K EP+WMLEWRL AY R
Sbjct: 23 QETVDAVREVG-GAYKYGWSTDIEMDYAPLGLNADIVKLISEKNEEPEWMLEWRLAAYER 81
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT K+P+WA + YP IDF YYYA PKS+ P+SLDDVDP+LL TY+KLGIP++EQ
Sbjct: 82 WLTKKEPNWAMVDYPEIDFQQQYYYARPKSMAEKPKSLDDVDPKLLETYKKLGIPLKEQA 141
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF++ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 142 ILAGVEGAEKMGDEPRKVAVDAVFDSVSVGTTFQDELKKAGVIFCSISEAIREHPELVKK 201
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 202 YLGSVVPVNDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 261
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRDE+QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 262 DKGSYVSYLEGCTAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEDGKGGIYNFV 321
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ ++GTKM
Sbjct: 322 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQAETGTKM 381
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG V++H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 382 IHLGKRTKSRIVSKGISAGKAQNTYRGLVTMHPKAKESRNYTQCDSLLIGDKCGAHTVPY 441
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 442 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAME 501
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 502 AQALVAISLEGSVG 515
>gi|166365050|ref|YP_001657323.1| cysteine desulfurase activator complex subunit SufB [Microcystis
aeruginosa NIES-843]
gi|166087423|dbj|BAG02131.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
Length = 480
Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats.
Identities = 311/490 (63%), Positives = 388/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ + P+GLNE+IIR ISAKK EP++ML++RL
Sbjct: 1 MSAT-----TVKNLVNQPYKYGFITDIESETIPRGLNEEIIRLISAKKKEPEFMLDFRLR 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AY +W M +PSW + YPAID+ ++ YY+APK SL++VDP L+ T+EKLGIP+
Sbjct: 56 AYHQWQKMTEPSWPHVSYPAIDYQNIIYYSAPKQKKEKLNSLEEVDPTLIETFEKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDA+FDSVS+ TTFKE+L + GVIF ISEA+ EHPDLV+KYL +
Sbjct: 116 SEQKRLS-----NVAVDAIFDSVSIATTFKEKLAEQGVIFCSISEALQEHPDLVQKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPVGDN++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 171 VVPVGDNYFAALNSAVFSDGSFVFIPKGVVCPMELSTYFRINNGETGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNWY GD+ GKGGIYNFVTKRG
Sbjct: 231 SVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDANGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+NT S I+SKGISAG S N+YRG V + A +RN++QCDS+LIG+N A+T PYI+
Sbjct: 351 RNTKSTIISKGISAGNSQNSYRGLVKMGPKAKGARNYSQCDSMLIGDNAEANTFPYIQVD 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S +EHEA+TSKI ++ LFY QRGI EE A++++V+GF ++VL KLPMEFA EA KL
Sbjct: 411 NNSAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLSKLPMEFAAEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 471 LSLKLEGTVG 480
>gi|89068823|ref|ZP_01156206.1| FeS assembly protein SufB [Oceanicola granulosus HTCC2516]
gi|89045593|gb|EAR51656.1| FeS assembly protein SufB [Oceanicola granulosus HTCC2516]
Length = 514
Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats.
Identities = 352/498 (70%), Positives = 413/498 (82%), Gaps = 14/498 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
ETV+ VRK+ +YKYG+ET+I++D APKGL+EDI+R IS K +EP+WM EWRL AY R
Sbjct: 18 EETVEAVRKL-SGKYKYGWETDIEMDYAPKGLSEDIVRLISGKNDEPEWMTEWRLGAYAR 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL M +P WA + YP IDF D YYYA PKS P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 77 WLKMDEPDWAMVEYPEIDFQDQYYYARPKSFETKPKSLDEVDPKLLETYQKLGIPLKEQM 136
Query: 124 ILAGVQT------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
ILAGV+ KVAVDAVFDSVSV TTF++EL+K+GVIF ISEAI EHP+
Sbjct: 137 ILAGVEGADEVATPEDNSERKVAVDAVFDSVSVGTTFQKELQKAGVIFCSISEAIREHPE 196
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LVKKYL +VVP GDNFYAALNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERT
Sbjct: 197 LVKKYLGSVVPQGDNFYAALNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERT 256
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNWYPGD +G+GGI
Sbjct: 257 LIIADKGSYVSYLEGCTAPQRDTAQLHAAVVEIIVEEDAEVKYSTVQNWYPGDEEGRGGI 316
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+
Sbjct: 317 YNFVTKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAITNNHQQADT 376
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAH
Sbjct: 377 GTKMVHLGKRTKSRIVSKGISAGQAQNTYRGLVSMHPKALESRNYTQCDSLLIGDQCGAH 436
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE KN+S +EHEATTSK+ DE +FYC QRG+ EE A+ALIVNGF +EVLQ LPME
Sbjct: 437 TVPYIEVKNNSSRVEHEATTSKVDDEQMFYCRQRGMDEEEAVALIVNGFAKEVLQALPME 496
Query: 472 FAVEAQKLIDISLEGSVG 489
FA+EAQ+L+ ISLEGSVG
Sbjct: 497 FAMEAQQLVAISLEGSVG 514
>gi|108762986|ref|YP_629413.1| cysteine desulfurase activator complex subunit SufB [Myxococcus
xanthus DK 1622]
gi|108466866|gb|ABF92051.1| FeS assembly protein SufB [Myxococcus xanthus DK 1622]
Length = 478
Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats.
Identities = 319/481 (66%), Positives = 391/481 (81%), Gaps = 6/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ ++++ Y GF T ++ D P GL+ED+IR ISAKK EP+++L+WRL A+R W TM
Sbjct: 4 ETLQELTRRPYAAGFVTQLESDTFPPGLDEDVIRQISAKKGEPEFLLDWRLKAFRHWKTM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K+P+W + Y ID+ + YY+APK SLD+VDPE+LRTYEKLGIP+ EQ++L
Sbjct: 64 KEPTWQAVTYAPIDYQAIRYYSAPKQKPVKASLDEVDPEILRTYEKLGIPLHEQKLLQ-- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTFK++L K+GVIF SEA+ EHP+LVKKYL TVVP DN++
Sbjct: 122 ---NVAVDAVFDSVSVATTFKDKLAKAGVIFCSFSEAVREHPELVKKYLGTVVPYSDNYF 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+A+EGS+VSYLEGCT
Sbjct: 179 AALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAADTGQFERTLIVAEEGSHVSYLEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RD NQLHAAVVELVALDNA IKYSTVQNWYPGD++G+GGIYNFVTKRG +KI
Sbjct: 239 APMRDTNQLHAAVVELVALDNATIKYSTVQNWYPGDAEGRGGIYNFVTKRGIAH-RAAKI 297
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N QQ D+GTKM+H+ KN+ S IVS
Sbjct: 298 SWTQVETGSAITWKYPSVILKGDDSVGEFYSVALTNHMQQADTGTKMVHIGKNSRSTIVS 357
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG NTYRG V V + A ++RN+TQCDSLL+G+ CGAHT+PYIE KN+S +EHE
Sbjct: 358 KGISAGRGQNTYRGLVKVLKSAENARNYTQCDSLLLGDKCGAHTVPYIEVKNASAQVEHE 417
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI ++ LFYC QRGI +E A+++IVNGF R+V ++LPMEFAVEAQKL+ +SLEGSV
Sbjct: 418 ASTSKIGEDQLFYCRQRGISQEDAVSMIVNGFCRQVFKELPMEFAVEAQKLLGVSLEGSV 477
Query: 489 G 489
G
Sbjct: 478 G 478
>gi|254697310|ref|ZP_05159138.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 2 str. 86/8/59]
gi|256159653|ref|ZP_05457410.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M490/95/1]
gi|260761720|ref|ZP_05874063.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 2 str. 86/8/59]
gi|265998074|ref|ZP_06110631.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M490/95/1]
gi|260672152|gb|EEX58973.1| cysteine desulfurase activator complex subunit SufB [Brucella
abortus bv. 2 str. 86/8/59]
gi|262552542|gb|EEZ08532.1| cysteine desulfurase activator complex subunit SufB [Brucella ceti
M490/95/1]
Length = 487
Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats.
Identities = 381/487 (78%), Positives = 430/487 (88%), Gaps = 18/487 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR +DVDQYKYGFET I+ DKAPKGLNEDIIRFISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETIDQVRGLDVDQYKYGFETTIEADKAPKGLNEDIIRFISAKKNEPEWMLEWRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY RWLTM++P+WAR+ YP IDF D YYY+APK+ GP+SLD+VDPELL+TYEKLGIP+R
Sbjct: 61 AYERWLTMEEPTWARVDYPKIDFQDAYYYSAPKNQSGPKSLDEVDPELLKTYEKLGIPLR 120
Query: 121 EQEILAGV------------------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
EQEILAGV + +VAVDAVFDSVSVVTTFKEEL K+GVIF I
Sbjct: 121 EQEILAGVRKQGEPSEIDGNPADNVYASGRVAVDAVFDSVSVVTTFKEELSKAGVIFCSI 180
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SEAI EHP+LV+KYL++VVPV DN+YA LNSAVFTDGSFVY+PKGVRCPMELSTYFRINE
Sbjct: 181 SEAIREHPELVQKYLASVVPVSDNYYATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINE 240
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K TGQFERTLIIADEG+YVSYLEGCTAPQRDENQLHAAVVELVA++NAEIKYSTVQNW+P
Sbjct: 241 KNTGQFERTLIIADEGAYVSYLEGCTAPQRDENQLHAAVVELVAMENAEIKYSTVQNWFP 300
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
GD GKGGIYNFVTKRGDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+
Sbjct: 301 GDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSRGEFYSIAV 360
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
SNG QQIDSGTKMLHL KNT+SRI+SKGISAG SNNTYRG+VS HR A ++RNFTQCDSL
Sbjct: 361 SNGHQQIDSGTKMLHLGKNTSSRIISKGISAGKSNNTYRGQVSAHRKAENARNFTQCDSL 420
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIGN+CGAHT+PYIE+KN++ EHEATTSKIS++ LFY +QRGIPEE AIALIVNGFV+
Sbjct: 421 LIGNDCGAHTVPYIEAKNATAQFEHEATTSKISEDQLFYVMQRGIPEEEAIALIVNGFVK 480
Query: 463 EVLQKLP 469
EV+Q+LP
Sbjct: 481 EVIQELP 487
>gi|218264754|ref|ZP_03478466.1| hypothetical protein PRABACTJOHN_04175 [Parabacteroides johnsonii
DSM 18315]
gi|218221803|gb|EEC94453.1| hypothetical protein PRABACTJOHN_04175 [Parabacteroides johnsonii
DSM 18315]
Length = 481
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 316/486 (65%), Positives = 388/486 (79%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ D + ++ YKYGF T+I + +GL+E+ +R ISAKKNEP+W+LE+RL A+R
Sbjct: 1 MEDSNDILNEVTTGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W T++ P+W + P ID+ D+ YYAAPK GP+SLD+VDPEL++T++KLGIP+ E+
Sbjct: 61 HWQTLEMPAWPHLNIPPIDYQDIIYYAAPKKKEGPKSLDEVDPELMKTFDKLGIPLHERA 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ HPDLV+KYL +VV
Sbjct: 121 QLSG-----MAVDAVMDSVSVKTTFKETLAEKGIIFSSFSEAVQHHPDLVQKYLGSVVSY 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ +YVSY
Sbjct: 176 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+VA + AE+KYSTVQNWYPGD +GKGGIYNFVTKRG C+G
Sbjct: 236 LEGCTAPMRDENQLHAAIVEIVAHERAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGLCKG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+HL +NT
Sbjct: 296 EGSKISWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTNNYQQADTGTKMIHLGRNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A +RN +QCDSLL+ + CGAHT PY + +N +
Sbjct: 356 STIVSKGISAGHSQNSYRGLVKVSPRAEGARNHSQCDSLLLSSTCGAHTFPYTDIQNETA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS+E LFYC QRGI E A+ LIVNG+ REV+ KLPMEFAVEAQKL+ IS
Sbjct: 416 VVEHEATTSKISEEQLFYCRQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|150010116|ref|YP_001304859.1| cysteine desulfurase activator complex subunit SufB
[Parabacteroides distasonis ATCC 8503]
gi|255012624|ref|ZP_05284750.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 2_1_7]
gi|256838939|ref|ZP_05544449.1| FeS assembly protein SufB [Parabacteroides sp. D13]
gi|262382597|ref|ZP_06075734.1| FeS assembly protein SufB [Bacteroides sp. 2_1_33B]
gi|298374486|ref|ZP_06984444.1| FeS assembly protein SufB [Bacteroides sp. 3_1_19]
gi|301308166|ref|ZP_07214120.1| FeS assembly protein SufB [Bacteroides sp. 20_3]
gi|149938540|gb|ABR45237.1| ABC transporter, permease [Parabacteroides distasonis ATCC 8503]
gi|256739858|gb|EEU53182.1| FeS assembly protein SufB [Parabacteroides sp. D13]
gi|262295475|gb|EEY83406.1| FeS assembly protein SufB [Bacteroides sp. 2_1_33B]
gi|298268854|gb|EFI10509.1| FeS assembly protein SufB [Bacteroides sp. 3_1_19]
gi|300833636|gb|EFK64252.1| FeS assembly protein SufB [Bacteroides sp. 20_3]
Length = 481
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 318/486 (65%), Positives = 389/486 (80%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++++ + ++ YKYGF T+I + +GL+E+ +R ISAKKNEP+W+LE+RL A+R
Sbjct: 1 MQDSNHIINEVTSGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W T++ P+W + P ID+ D+ YYAAPK GP+SLD+VDPELL+T++KLGIP+ EQ+
Sbjct: 61 HWQTLEMPTWPHLNIPPIDYQDIIYYAAPKKKEGPKSLDEVDPELLKTFDKLGIPLEEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ HPDLV+KYL +VV
Sbjct: 121 HLSG-----MAVDAVMDSVSVKTTFKENLAEKGIIFCSFSEAVQHHPDLVQKYLGSVVGY 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ +YVSY
Sbjct: 176 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+VA + AE+KYSTVQNWYPGD +GKGGIYNFVTKRG C+G
Sbjct: 236 LEGCTAPMRDENQLHAAIVEIVANERAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGLCKG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 296 EGSKISWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTNNYQQADTGTKMIHLGKNTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A +RN +QCDSLL+ + CGAHT PY + +N +
Sbjct: 356 STIVSKGISAGHSQNSYRGLVKVSARAEGARNHSQCDSLLLSSTCGAHTFPYADIQNETA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS+E LFYC QRGI E A+ LIVNG+ REV+ KLPMEFAVEAQKL+ IS
Sbjct: 416 IVEHEATTSKISEEQLFYCQQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|160887873|ref|ZP_02068876.1| hypothetical protein BACUNI_00276 [Bacteroides uniformis ATCC 8492]
gi|270294864|ref|ZP_06201065.1| FeS assembly protein SufB [Bacteroides sp. D20]
gi|156862559|gb|EDO55990.1| hypothetical protein BACUNI_00276 [Bacteroides uniformis ATCC 8492]
gi|270274111|gb|EFA19972.1| FeS assembly protein SufB [Bacteroides sp. D20]
Length = 484
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 318/486 (65%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T++ D +GLNED++R IS KK EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTDVHTDIIERGLNEDVVRLISEKKGEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV+KYL +VVP
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVQKYLGSVVPY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++G+GG+YNFVTKRG C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGRGGVYNFVTKRGHCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N QQ D+GTKM+HL KNT
Sbjct: 299 VDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNHQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGKSENSYRGLVRVAQKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 IVEHEATTSKISEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLAIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|114776742|ref|ZP_01451785.1| FeS assembly protein SufB [Mariprofundus ferrooxydans PV-1]
gi|114552828|gb|EAU55259.1| FeS assembly protein SufB [Mariprofundus ferrooxydans PV-1]
Length = 484
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 332/490 (67%), Positives = 394/490 (80%), Gaps = 7/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M V++ K + Y+ GF T+I D P GLNED+IR ISAKK+EP+W+L WRL
Sbjct: 1 MSEVKQER-KPEEFTNRDYQAGFITDIDTDTLPPGLNEDVIRHISAKKDEPEWLLNWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPI 119
A+R W TM +P W + Y D+ + YY+APKS GP+SLD+VDP+LL TY KLGIP+
Sbjct: 60 AFRHWQTMTEPHWPNVTYTPTDYQSISYYSAPKSQADGPKSLDEVDPKLLETYAKLGIPL 119
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
REQE LAG VAVDAVFDSVSV TTFK +LK GVIF PISEA+ ++P+LV++YL T
Sbjct: 120 REQEFLAG-----VAVDAVFDSVSVATTFKGKLKDVGVIFCPISEAVRDYPELVQQYLGT 174
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP GDNF+AALNSAVFTDGSFV+IPKGVRCPMELSTYFRIN TGQFERTLIIA+EGS
Sbjct: 175 VVPTGDNFFAALNSAVFTDGSFVFIPKGVRCPMELSTYFRINALNTGQFERTLIIAEEGS 234
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVELVALD+A+IKYSTVQNWYPGD G GGIYNFVTKR
Sbjct: 235 YVSYLEGCTAPQRDENQLHAAVVELVALDDAQIKYSTVQNWYPGDENGLGGIYNFVTKRA 294
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG RSK+SWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++ QQ D+GTKM+H+
Sbjct: 295 DCRGARSKVSWTQVETGSAITWKYPSCVLRGDDSVGEFYSVALTKMRQQADTGTKMIHIG 354
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGI+AGF N +YRG V + + A +RN+TQCDSLLIG+ CGAHT PY+E K
Sbjct: 355 KNTRSTIVSKGIAAGFGNQSYRGLVRIAKSAEGARNYTQCDSLLIGDKCGAHTFPYVEVK 414
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +EHEATTSKI ++ LFYC RGI EE A+ +IVNGF ++V +LPMEFAVEA +L
Sbjct: 415 NPSATMEHEATTSKIGEDQLFYCQSRGISEEDAVNMIVNGFCKDVFNELPMEFAVEANRL 474
Query: 480 IDISLEGSVG 489
+++SLEG+VG
Sbjct: 475 MEVSLEGAVG 484
>gi|262196470|ref|YP_003267679.1| FeS assembly protein SufB [Haliangium ochraceum DSM 14365]
gi|262079817|gb|ACY15786.1| FeS assembly protein SufB [Haliangium ochraceum DSM 14365]
Length = 479
Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats.
Identities = 325/486 (66%), Positives = 389/486 (80%), Gaps = 7/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ T D + ++ +Y GF T+I+ D AP GL+E II FISAKK EP W+LE RL A++
Sbjct: 1 MSTTTDHIDQLLQQKYAAGFVTDIEQDYAPPGLDESIIAFISAKKEEPAWLLERRLEAFQ 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W +M P WA + YP ID+ + YYAAPK +SLD+VDPE+L TY+KLGIP+ E+
Sbjct: 61 YWKSMPTPEWANVEYPPIDYQAISYYAAPK--KKLESLDEVDPEILATYDKLGIPLHERA 118
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG VAVDAVFDSVSV TTFK++L GVIF ISEA+ EHP+L+KKY+ +VVP
Sbjct: 119 ALAG-----VAVDAVFDSVSVATTFKDKLAAEGVIFCSISEAVREHPELIKKYMGSVVPY 173
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN+YAALN+AVFTDGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIA+EGSYVSY
Sbjct: 174 TDNYYAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIAEEGSYVSY 233
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVELVA D+A IKYSTVQNWYPGD+ GKGGIYNFVTKRG C G
Sbjct: 234 LEGCTAPMRDENQLHAAVVELVAHDDASIKYSTVQNWYPGDADGKGGIYNFVTKRGLCAG 293
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
RSKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N QQ D+GTKM+HL + T
Sbjct: 294 KRSKISWTQVETGSAITWKYPSCVLKGDHSVGEFYSVALTNNRQQADTGTKMIHLGEGTR 353
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG TYRG V + + A +RN+TQCDSLLIG+ CGAHT+PY+E +N+S
Sbjct: 354 STIISKGISAGRGQQTYRGLVRIGKKAKSARNYTQCDSLLIGDRCGAHTVPYVEVRNASA 413
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
LEHEATT++I ++ LFYC QRGI EE A+ LIVNGF +EV ++LPMEFAVEAQKL+ +S
Sbjct: 414 KLEHEATTTRIGEDQLFYCRQRGIAEEDAVNLIVNGFCKEVFKELPMEFAVEAQKLLAVS 473
Query: 484 LEGSVG 489
LEG+VG
Sbjct: 474 LEGAVG 479
>gi|189502516|ref|YP_001958233.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Amoebophilus asiaticus 5a2]
gi|189497957|gb|ACE06504.1| hypothetical protein Aasi_1170 [Candidatus Amoebophilus asiaticus
5a2]
Length = 481
Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats.
Identities = 324/486 (66%), Positives = 387/486 (79%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++++ Y YGFE+NI V++APKGLNED I FISAKKNEP W+LEWRL AY
Sbjct: 1 MSTEKQLLQQLTTADYPYGFESNIAVEQAPKGLNEDTIHFISAKKNEPQWLLEWRLKAYH 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT+K+P+W + YP I++ D+ YYAAPK+ SLD+VDPEL T ++LGI I EQ+
Sbjct: 61 HWLTLKEPTWPNVTYPPINYQDISYYAAPKNSKKLNSLDEVDPELKNTLDRLGISIEEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L G VA+D VFDSVSV TTF+ +L + G+IF +EA+ HP+LV+KYL TVVP
Sbjct: 121 RLTG-----VAMDIVFDSVSVATTFQAKLHELGIIFCSFTEAVQNHPELVQKYLGTVVPP 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN++AALNSAVF+DGSF YIPKGV CPMELSTYFRIN TGQFERTLIIA+EGSYVSY
Sbjct: 176 QDNYFAALNSAVFSDGSFCYIPKGVHCPMELSTYFRINAANTGQFERTLIIAEEGSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVE+ A AE+KYSTVQNWYPGD +GKGGI+NFVTKRG C G
Sbjct: 236 LEGCTAPMRDENQLHAAVVEIYAASRAEVKYSTVQNWYPGDKEGKGGIFNFVTKRGICAG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++ QQ D+GTKM+H+ KNT
Sbjct: 296 ESSKISWTQVETGSAITWKYPSCILMGDNSIGEFYSVAVTKNKQQADTGTKMIHIGKNTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S N+YRG V + R A +RNF+QCDSLL+GN CGAHT PYI+ KNS+
Sbjct: 356 SRIVSKGISAGQSQNSYRGLVKITRNATKARNFSQCDSLLLGNQCGAHTFPYIDVKNSTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI +E LFYC QRGI E A+ALIVNG+ +EVL KLPMEFAVEAQKL++++
Sbjct: 416 QVEHEATTSKIGEEQLFYCNQRGIDNEQAVALIVNGYCKEVLNKLPMEFAVEAQKLLELT 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|332826941|gb|EGJ99738.1| hypothetical protein HMPREF9455_03870 [Dysgonomonas gadei ATCC
BAA-286]
Length = 485
Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats.
Identities = 326/487 (66%), Positives = 391/487 (80%), Gaps = 3/487 (0%)
Query: 4 VRETVDKV-RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
++ET DK+ + YKYGF T+I+ + P GLNED++R ISAKKNEP+W+LE+RL AY
Sbjct: 1 MQETQDKILEDVTSGDYKYGFVTDIETEVIPVGLNEDVVRLISAKKNEPEWLLEFRLKAY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WLTM P WA ++ P ID+ + Y+AAPK GP+SLD+VDPELL+T++KLG+P+ E+
Sbjct: 61 RHWLTMDMPDWAMLKIPPIDYQSISYFAAPKKKDGPKSLDEVDPELLKTFDKLGVPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
EILAGV V SVSV TTFKE L + G+IF SEA+ EHP+LVKKYL +VVP
Sbjct: 121 EILAGVTGMAVDAVVD--SVSVKTTFKEVLAEKGIIFSSFSEAVQEHPELVKKYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+A LNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ SYVS
Sbjct: 179 YRDNFFATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDNSYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAA+VE+VALD+AE+KYSTVQNWYPGD +GKGGIYNFVTKRG C+
Sbjct: 239 YLEGCTAPMRDENQLHAAIVEIVALDHAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGVCK 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSA+TWKYPSC+L G+ S GEFYS+A++N FQQ D+GTKM+H+ KNT
Sbjct: 299 GCGSKISWTQVETGSAVTWKYPSCILAGDDSIGEFYSVAVTNNFQQADTGTKMIHIGKNT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
SRIVSKGISAG S N+YRG V V A +RN +QCDSLL+G+ CGAHT PY + N S
Sbjct: 359 RSRIVSKGISAGQSQNSYRGLVKVSPKAEGARNHSQCDSLLLGDKCGAHTFPYSDIANPS 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS++ + YC QRGI E A+ LIVNG+ +EV+Q LPMEFAVEAQKL+ I
Sbjct: 419 AIIEHEATTSKISEDQILYCNQRGIGTEEAVGLIVNGYAKEVMQNLPMEFAVEAQKLLQI 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|317477852|ref|ZP_07937038.1| FeS assembly protein SufB [Bacteroides sp. 4_1_36]
gi|316905988|gb|EFV27756.1| FeS assembly protein SufB [Bacteroides sp. 4_1_36]
Length = 484
Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats.
Identities = 318/486 (65%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T++ D +GLNED++R IS KK EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTDVHTDIIERGLNEDVVRLISEKKGEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV+KYL +VVP
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVHEHPDLVQKYLGSVVPY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++G+GG+YNFVTKRG C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGRGGVYNFVTKRGHCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N QQ D+GTKM+HL KNT
Sbjct: 299 VDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNHQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGKSENSYRGLVRVAQKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 IVEHEATTSKISEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLAIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|163746293|ref|ZP_02153651.1| component of SufBCD complex [Oceanibulbus indolifex HEL-45]
gi|161380178|gb|EDQ04589.1| component of SufBCD complex [Oceanibulbus indolifex HEL-45]
Length = 510
Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats.
Identities = 348/494 (70%), Positives = 409/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ +YKYG+ T+I++D AP GLN DI+R IS K EP+WM EWRL AY R
Sbjct: 18 QETVDAVREVG-GKYKYGWSTDIEMDYAPMGLNPDIVRLISEKNEEPEWMTEWRLAAYDR 76
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT K+P WA + YP IDF YYYA PKS+ P+SLDDVDP+LL TY+KLGIP++EQ
Sbjct: 77 WLTKKEPDWAMVDYPEIDFQKQYYYARPKSMATKPKSLDDVDPKLLDTYKKLGIPLKEQM 136
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+EELKK+GVIF ISEAI EHP+LV++
Sbjct: 137 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQEELKKAGVIFCSISEAIREHPELVRR 196
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 197 YLGSVVPVNDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 256
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRDE+QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 257 DKGSYVSYLEGCTAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 316
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 317 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 376
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 377 IHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGSECGAHTVPY 436
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ +FYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 437 IEVKNNSSRVEHEATTSKVDDDQMFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAME 496
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 497 AQALVAISLEGSVG 510
>gi|149914907|ref|ZP_01903436.1| FeS assembly protein SufB [Roseobacter sp. AzwK-3b]
gi|149811095|gb|EDM70932.1| FeS assembly protein SufB [Roseobacter sp. AzwK-3b]
Length = 507
Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats.
Identities = 346/494 (70%), Positives = 414/494 (83%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YK+G+ T+I++D APKGL EDI++ IS K EP+WM EWRL AY R
Sbjct: 15 KETVDAVREM-AGTYKHGWNTDIEMDYAPKGLTEDIVKLISEKNGEPEWMTEWRLQAYER 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL MK+P WA + YP +DF + YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WLQMKEPEWAMLDYPEVDFQNQYYYARPKSMAVKPKSLDEVDPKLLETYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAG++ KVAVDAVFDSVSV TTF++EL+K+GVIF ISEAI +HP+L+KK
Sbjct: 134 ILAGIEGAEDAPAEGRKVAVDAVFDSVSVGTTFQKELEKAGVIFCSISEAIEKHPELIKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRDE+QLHAAVVE+V ++AE+KYSTVQNW+PG+ G GGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPQRDESQLHAAVVEIVVEEDAEVKYSTVQNWFPGNEDGTGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N FQQ D+GTKM
Sbjct: 314 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAITNNFQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 IHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF R+VLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCRDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|126728566|ref|ZP_01744381.1| FeS assembly protein SufB [Sagittula stellata E-37]
gi|126710496|gb|EBA09547.1| FeS assembly protein SufB [Sagittula stellata E-37]
Length = 510
Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats.
Identities = 344/498 (69%), Positives = 408/498 (81%), Gaps = 15/498 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD VR DV YK+G+ T+I+++ APKGL+ DI+R IS K EP+WM +WRL AY R
Sbjct: 15 QQTVDAVR--DVSTYKHGWNTDIEMEYAPKGLSPDIVRLISEKNEEPEWMTDWRLQAYER 72
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQE 123
WL +P+WA + YP IDF + YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 73 WLQKTEPTWAMVDYPEIDFQEQYYYARPKSMTEKPKSLDEVDPKLLETYEKLGIPLKEQM 132
Query: 124 ILAGVQT------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
ILAGV+ +VAVDAVFDSVSV TTF++ELK +GVIF ISEAI EHP+
Sbjct: 133 ILAGVEGAGDAPAEAKEGERRVAVDAVFDSVSVGTTFQKELKAAGVIFCSISEAIREHPE 192
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LVKKYL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERT
Sbjct: 193 LVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERT 252
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LIIAD+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNW+PGD GKGGI
Sbjct: 253 LIIADKGSYVSYLEGCTAPQRDTAQLHAAVVEIIVEEDAEVKYSTVQNWFPGDENGKGGI 312
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+
Sbjct: 313 YNFVTKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNHQQADT 372
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL ++T SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG CGAH
Sbjct: 373 GTKMIHLGRDTKSRIVSKGISAGVAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGGKCGAH 432
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T+PYIE KN+S EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF REVLQ LPME
Sbjct: 433 TVPYIEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCREVLQALPME 492
Query: 472 FAVEAQKLIDISLEGSVG 489
FA+EAQ+L+ ISLEGSVG
Sbjct: 493 FAMEAQQLVAISLEGSVG 510
>gi|115372525|ref|ZP_01459833.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
gi|310819042|ref|YP_003951400.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
gi|115370487|gb|EAU69414.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
gi|309392114|gb|ADO69573.1| FeS assembly protein SufB [Stigmatella aurantiaca DW4/3-1]
Length = 478
Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats.
Identities = 318/481 (66%), Positives = 388/481 (80%), Gaps = 6/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ ++++ Y+ GF T ++ D P GLNE++IR ISAKK EP+++LEWRL AYR WLT+
Sbjct: 4 ETLQELTRRPYEAGFVTAVEADTLPPGLNEEVIRLISAKKGEPEFLLEWRLKAYRHWLTL 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K+PSW +RY ID+ + YY+AP+ SLD VDPE+LRTY KLGIP+ EQ++L
Sbjct: 64 KEPSWQSVRYHPIDYQAIRYYSAPRQKPKLDSLDQVDPEILRTYAKLGIPLEEQKMLQ-- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTFK++L K+GVIF SEA+ EHP+L+++YL TVVP DN++
Sbjct: 122 ---NVAVDAVFDSVSVATTFKDKLAKAGVIFCSFSEAVREHPELIRRYLGTVVPYSDNYF 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSF Y+PKGVRCPMELSTYFRIN TGQFERTLI+ADEGS VSYLEGCT
Sbjct: 179 AALNSAVFSDGSFCYVPKGVRCPMELSTYFRINAAETGQFERTLIVADEGSTVSYLEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RD NQLHAAVVELVALD A IKYSTVQNWYPGD++G+GGIYNFVTKRG RSKI
Sbjct: 239 APMRDTNQLHAAVVELVALDGASIKYSTVQNWYPGDAEGRGGIYNFVTKRGIAH-RRSKI 297
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +LRG+ + GEFYS+A++N QQ D+GTKM+H+ +NT S IVS
Sbjct: 298 SWTQVETGSAITWKYPSVILRGDDAVGEFYSVALTNHRQQADTGTKMVHIGRNTRSTIVS 357
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG NTYRG V V + A +RN+TQCDSLL+G+ CGAHT+PYIE KN+S +EHE
Sbjct: 358 KGISAGHGQNTYRGLVRVLKNAEGARNYTQCDSLLLGSQCGAHTLPYIEVKNASAQVEHE 417
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI ++ LFYC QRGI E A+++IVNGF R+V ++LPMEFAVEAQKL+ +SLEGSV
Sbjct: 418 ASTSKIGEDQLFYCQQRGISREDAVSMIVNGFCRQVFKELPMEFAVEAQKLLGLSLEGSV 477
Query: 489 G 489
G
Sbjct: 478 G 478
>gi|163731799|ref|ZP_02139246.1| component of SufBCD complex [Roseobacter litoralis Och 149]
gi|161395253|gb|EDQ19575.1| component of SufBCD complex [Roseobacter litoralis Och 149]
Length = 512
Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats.
Identities = 341/494 (69%), Positives = 407/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD VR++ +YK+G+ T+I+++ APKGL+ DI+R IS K EP+WMLEWRL AY R
Sbjct: 20 QDTVDAVREVG-GKYKHGWSTDIEMEYAPKGLSPDIVRLISEKNEEPEWMLEWRLAAYDR 78
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL +P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 79 WLQKTEPKWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLETYKKLGIPLKEQM 138
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVS+ TTF++EL K+GVIF ISEAI +HP+LVKK
Sbjct: 139 ILAGVEGAEELGDEPRKVAVDAVFDSVSLGTTFRDELMKAGVIFCSISEAIKDHPELVKK 198
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DN+YA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 199 YLGSVVPVSDNYYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 258
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNWYPGD G GGIYNFV
Sbjct: 259 DKGSYVSYLEGCTAPQRDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGVGGIYNFV 318
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 319 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 378
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG NCGAHT+PY
Sbjct: 379 IHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGGNCGAHTVPY 438
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 439 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAME 498
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 499 AQQLVAISLEGSVG 512
>gi|82701829|ref|YP_411395.1| cysteine desulfurase activator complex subunit SufB [Nitrosospira
multiformis ATCC 25196]
gi|82409894|gb|ABB74003.1| Iron-regulated ABC transporter membrane component SufB
[Nitrosospira multiformis ATCC 25196]
Length = 478
Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats.
Identities = 313/489 (64%), Positives = 392/489 (80%), Gaps = 11/489 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ++ + YK+GF T I+ D APKGLNEDIIR IS KKNEP W+L++RL
Sbjct: 1 MSAV------LQNLVNQPYKHGFVTEIESDVAPKGLNEDIIRLISTKKNEPAWLLDFRLK 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY++WL M++P W ++YP IDF + YYAAPK S+D+VDPELLRT+EKLG+P+
Sbjct: 55 AYQQWLKMEEPKWPNVKYPRIDFQAISYYAAPKPKKKLSSMDEVDPELLRTFEKLGVPMH 114
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG VAVD +FDSVSV TT+K++L + G+IF ISEA+ +P+LVK+YL TV
Sbjct: 115 ERAALAG-----VAVDVIFDSVSVATTYKQKLAEVGIIFCSISEAVHAYPELVKQYLGTV 169
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPVGDN+YAALNSAVFTDG+F +IPKGV+CPM+LSTYFRIN + +GQFERTLI+A+EGS
Sbjct: 170 VPVGDNYYAALNSAVFTDGTFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIVAEEGSS 229
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+ D NQLHAAVVEL+ALDNA+IKYSTVQNWY GD +G GGIYNFVTKRG
Sbjct: 230 VSYLEGCTAPRFDTNQLHAAVVELIALDNADIKYSTVQNWYAGDEKGVGGIYNFVTKRGL 289
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+G S+ISWTQ+ETGSAITWKYPSC+L+GE S GEFYS+A++N +QQ D+GTKM+H+ K
Sbjct: 290 AKGANSRISWTQVETGSAITWKYPSCILQGENSVGEFYSVAVTNNYQQADTGTKMIHIGK 349
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S IVSKGISAG SNN+YRG V + A+ +RN++QCDS+LIG+ CGAHT PYI+ +N
Sbjct: 350 NTRSTIVSKGISAGHSNNSYRGLVRIAPTASGARNYSQCDSMLIGDQCGAHTFPYIQVRN 409
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEA+TSKI ++ LFY QRGI E A+++I+NGF ++V Q+LPMEFAVEA KL+
Sbjct: 410 QNAKVEHEASTSKIGEDQLFYFAQRGIGNEEAVSMIINGFCKDVFQQLPMEFAVEATKLL 469
Query: 481 DISLEGSVG 489
LEGSVG
Sbjct: 470 GFKLEGSVG 478
>gi|126737792|ref|ZP_01753522.1| FeS assembly protein SufB [Roseobacter sp. SK209-2-6]
gi|126721185|gb|EBA17889.1| FeS assembly protein SufB [Roseobacter sp. SK209-2-6]
Length = 506
Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats.
Identities = 348/494 (70%), Positives = 408/494 (82%), Gaps = 11/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD V ++ YKYG+ET+I+++ APKGL DI++ IS K EP+WML WRL AY R
Sbjct: 15 QETVDAVAEV--GTYKYGWETDIEMEYAPKGLTTDIVKLISEKNEEPEWMLNWRLEAYER 72
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL ++P+WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 73 WLQKEEPTWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLETYKKLGIPLKEQM 132
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 133 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIKEHPELVKK 192
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TVVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 193 YLGTVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 252
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 253 DKGSYVSYLEGCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDEDGKGGIYNFV 312
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+KI WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTKM
Sbjct: 313 TKRADCRGDRAKIMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKM 372
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 373 VHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGDKCGAHTVPY 432
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 433 IEVKNNSSRVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKDVLQALPMEFAME 492
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 493 AQQLVAISLEGSVG 506
>gi|89054855|ref|YP_510306.1| cysteine desulfurase activator complex subunit SufB [Jannaschia sp.
CCS1]
gi|88864404|gb|ABD55281.1| Iron-regulated ABC transporter membrane component SufB [Jannaschia
sp. CCS1]
Length = 508
Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats.
Identities = 350/494 (70%), Positives = 406/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD V+ + YKYG+ T I++D AP G+NEDI+R IS K EP+WML+WRL A++R
Sbjct: 16 QETVDAVKGLG-GAYKYGWNTEIEMDYAPMGVNEDIVRLISEKNEEPEWMLDWRLQAFKR 74
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W MK+P WA + YPAID+ YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 75 WQKMKEPEWAMVDYPAIDYQSQYYYARPKSMETKPKSLDEVDPKLLETYKKLGIPLKEQM 134
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHPDLVKK
Sbjct: 135 ILAGVEGAEDMPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIKEHPDLVKK 194
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVP+ DNF+A LNSAVF+DGSFVYIP GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 195 YLGSVVPITDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIA 254
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D SYVSYLEGCTAP RD +QLHAAVVELV LD+AEIKYSTVQNWYPGD GKGGIYNFV
Sbjct: 255 DRESYVSYLEGCTAPMRDTHQLHAAVVELVLLDDAEIKYSTVQNWYPGDENGKGGIYNFV 314
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 315 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 374
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 375 MHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPY 434
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ +FYC RG+ EE A+ALIVNGF +EVLQ LPMEFA+E
Sbjct: 435 IEVKNNSSRVEHEATTSKVDDDQMFYCQSRGMDEEEAVALIVNGFAKEVLQALPMEFAME 494
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 495 AQQLVAISLEGSVG 508
>gi|119386671|ref|YP_917726.1| cysteine desulfurase activator complex subunit SufB [Paracoccus
denitrificans PD1222]
gi|119377266|gb|ABL72030.1| Iron-regulated ABC transporter membrane component SufB [Paracoccus
denitrificans PD1222]
Length = 508
Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats.
Identities = 347/494 (70%), Positives = 411/494 (83%), Gaps = 11/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RETV+ V+ + YKYG++T I+++ AP+G+NEDI+R IS K EP+WM EWRL A+RR
Sbjct: 17 RETVETVQNM--GSYKYGWDTEIEMEYAPRGINEDIVRLISKKNEEPEWMTEWRLQAFRR 74
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W TM +P WA + YP ID+ D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 75 WQTMTEPKWAMLNYPEIDYQDQYYYARPKSMQVKPKSLDEVDPKLLATYEKLGIPLKEQM 134
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAG++ KVAVDAVFDSVSV TTFK+EL K+GVIF ISEAI EHP+LVKK
Sbjct: 135 ILAGIEGAEGAPAEGRKVAVDAVFDSVSVGTTFKDELAKAGVIFCSISEAIREHPELVKK 194
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVP DNF+A LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 195 YLGSVVPQSDNFFATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 254
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP+RD QLHAAVVE+V L++AE+KYSTVQNW+PGD +GKGGIYNFV
Sbjct: 255 DKGSYVSYLEGCTAPKRDVAQLHAAVVEIVVLEDAEVKYSTVQNWFPGDEEGKGGIYNFV 314
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCR R+K+ WTQ+ETGSAITWKYPSC+LRG++S GEFYSIAI+N QQ D+GTKM
Sbjct: 315 TKRADCREARAKVMWTQVETGSAITWKYPSCILRGDESQGEFYSIAIANNHQQADTGTKM 374
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 375 IHLGKNTRSRIVSKGISAGQAQNTYRGLVSMHPRAKNSRNYTQCDSLLIGDKCGAHTVPY 434
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF REVLQ LPMEFA+E
Sbjct: 435 IEVKNTSSCVEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCREVLQALPMEFAME 494
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 495 AQSLVAISLEGSVG 508
>gi|114331237|ref|YP_747459.1| cysteine desulfurase activator complex subunit SufB [Nitrosomonas
eutropha C91]
gi|114308251|gb|ABI59494.1| Iron-regulated ABC transporter membrane component SufB
[Nitrosomonas eutropha C91]
Length = 478
Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats.
Identities = 310/480 (64%), Positives = 389/480 (81%), Gaps = 5/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ + YK+GF TNI+ D APKGLNEDIIR IS+KKNEP+W+L +RL AYRRWL M
Sbjct: 4 ALQNLVNQPYKHGFVTNIESDIAPKGLNEDIIRLISSKKNEPEWLLTFRLEAYRRWLNMI 63
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P+W ++YP I+F ++ YY+APK S+D+VDPELLRT+EKLGIP+ E+ LAG
Sbjct: 64 EPTWQNVKYPKINFQNISYYSAPKPKKKLASMDEVDPELLRTFEKLGIPMHERAALAG-- 121
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVD +FDSVSV TT+KE+L + G+IF ISEA+ +P+L+++YL TVVP GDN+YA
Sbjct: 122 ---VAVDVIFDSVSVATTYKEKLAEVGIIFCSISEAVQRYPELIRQYLGTVVPPGDNYYA 178
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVFTDGSF +IPKGV+CPM+LSTYFRIN + +GQFERTLIIA+EG+ VSYLEGCTA
Sbjct: 179 ALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIIAEEGASVSYLEGCTA 238
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P+ D NQLHAAVVEL+ALD+A+IKYSTVQNWY GD G GGIYNFVTKRG +G S+IS
Sbjct: 239 PRFDTNQLHAAVVELIALDDADIKYSTVQNWYAGDENGVGGIYNFVTKRGLAKGRNSRIS 298
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+LRGE S GEFYS+A++N QQ D+GTKM+H+ NT S IVSK
Sbjct: 299 WTQVETGSAITWKYPSCILRGENSVGEFYSVAVTNHHQQADTGTKMIHIGPNTRSTIVSK 358
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG SN++YRG V + A ++RN++QCDS+LIG+ CGAHT PYI+ +N+S +EHEA
Sbjct: 359 GISAGQSNSSYRGLVRITPTARNARNYSQCDSMLIGSQCGAHTFPYIQVQNNSAQVEHEA 418
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI ++ LFY QRGI E A+++I+NGF +EV Q+LP+EFAVEA KL+ LEGSVG
Sbjct: 419 STSKIGEDQLFYFAQRGIDAEEAVSMIINGFCKEVFQQLPLEFAVEATKLLSFKLEGSVG 478
>gi|56551319|ref|YP_162158.1| cysteine desulfurase activator complex subunit SufB [Zymomonas
mobilis subsp. mobilis ZM4]
gi|260753061|ref|YP_003225954.1| cysteine desulfurase activator complex subunit SufB [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|56542893|gb|AAV89047.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552424|gb|ACV75370.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 490
Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats.
Identities = 331/490 (67%), Positives = 405/490 (82%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + D+Y++GF + + + APKGLNEDI+RFISAKK EP+WMLEWRL
Sbjct: 1 MSETKNEAALEALARNDRYEWGFSSAVDQEFAPKGLNEDIVRFISAKKGEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWL M+ P WA+++ P ID+ D YYYAAPK+ +SLD++DPE+ +TYEKLGIPI
Sbjct: 61 AYKRWLEMEMPHWAKLKLPEIDYQDAYYYAAPKAKPKIESLDEIDPEIRKTYEKLGIPIE 120
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ++LAGV +VAVDAVFDSVSV TTF+E+L++ GVIF+ ISEAI +P+LVK+YL
Sbjct: 121 EQKVLAGVSGAREVAVDAVFDSVSVATTFREKLQEVGVIFLSISEAIKTYPELVKRYLGR 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+++ALNSAVF+DG+FVYIP+GVRCPMELSTYFRIN TGQFERTLI+AD+G+
Sbjct: 181 VVPVRDNYFSALNSAVFSDGTFVYIPEGVRCPMELSTYFRINAANTGQFERTLIVADKGA 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVE+ + AE++YSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 241 YVSYLEGCTAPQRDENQLHAAVVEIFVHEEAEVRYSTVQNWYPGDENGKGGIYNFVTKRA 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G RSK+SWTQ+ETGSAITWKYPSC+L+GE+S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 301 LCDGARSKVSWTQVETGSAITWKYPSCILKGEESVGEFYSVALTNNYQQADTGTKMIHIG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KN+ S I+SKGISAG S+NTYRG V V A + RNFT+CDSLLIG+ CGAHT+PYIE +
Sbjct: 361 KNSRSTIISKGISAGHSDNTYRGLVKVGGAAENVRNFTRCDSLLIGDKCGAHTVPYIEVR 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +EHEATTSKISD+ LFY QRG+ E+ A+ALIVNGF R+VLQKLPMEFA+EAQKL
Sbjct: 421 NPSAKVEHEATTSKISDDELFYARQRGLNEDEAVALIVNGFARDVLQKLPMEFAIEAQKL 480
Query: 480 IDISLEGSVG 489
+ ISLEG+VG
Sbjct: 481 LGISLEGAVG 490
>gi|255010116|ref|ZP_05282242.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis 3_1_12]
Length = 485
Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats.
Identities = 324/490 (66%), Positives = 395/490 (80%), Gaps = 6/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M+ E V+++ ++YKYGF T + D KGLNED++R IS+KKNEPDW+LE+RL
Sbjct: 1 MMQQEEPNKYVKELTQEKYKYGFTTEVHTDIIEKGLNEDVVRLISSKKNEPDWLLEFRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPI 119
AYR WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+
Sbjct: 61 AYRHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPL 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKYL +
Sbjct: 121 EEQMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYLGS 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VV DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ S
Sbjct: 176 VVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDS 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG
Sbjct: 236 YVSYLEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+C+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL
Sbjct: 296 NCKGVDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++
Sbjct: 356 KNTRSTIVSKGISAGKSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIH 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEATTSKIS++ +FYC QRGI E AI LIVNG+ +EVL KLPMEFAVEAQKL
Sbjct: 416 NETAVVEHEATTSKISEDQIFYCNQRGISTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKL 475
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 476 LTISLEGSVG 485
>gi|119509158|ref|ZP_01628309.1| hypothetical protein N9414_05135 [Nodularia spumigena CCY9414]
gi|119466324|gb|EAW47210.1| hypothetical protein N9414_05135 [Nodularia spumigena CCY9414]
Length = 479
Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats.
Identities = 312/490 (63%), Positives = 389/490 (79%), Gaps = 12/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M +T + YKYGF T+I+ D P+GLNED++R ISAKKNEP +ML++RL
Sbjct: 1 MSVTAKT------LVNQPYKYGFITDIEADTIPRGLNEDVVRLISAKKNEPQFMLDFRLR 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
YR+WL M +P+W ++YPAID+ ++ YY+APK SLD+VDP LL T+EKLGI +
Sbjct: 55 CYRQWLKMTEPTWPSVKYPAIDYQNIIYYSAPKKKKAKLNSLDEVDPTLLETFEKLGISL 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LA VAVDA+FDSVSV TTFK++L + GVIF ISEA+ EHP+LV+KYL +
Sbjct: 115 SEQKRLA-----NVAVDAIFDSVSVATTFKDKLAEDGVIFCSISEALQEHPELVRKYLGS 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++AALN AVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLI+A+EGS
Sbjct: 170 VVPAADNYFAALNGAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGS 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP D NQLHAAVVELVALDNAEIKYSTVQNWY GD +GKGGIYNFVTKRG
Sbjct: 230 YVSYLEGCTAPMYDTNQLHAAVVELVALDNAEIKYSTVQNWYAGDEKGKGGIYNFVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+
Sbjct: 290 LCQGVNSKISWTQVETGSAITWKYPSCVLLGDNSVGEFYSVALTNNMQQADTGTKMIHVG 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S+N+YRG V V+ A +RN++QCDS+LIG+N A+T PYI+ +
Sbjct: 350 KNTRSTIISKGISAGNSSNSYRGLVKVNPTAKGARNYSQCDSMLIGDNAHANTFPYIQVQ 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGI E AI+++++GF ++V +LPMEFAVEA KL
Sbjct: 410 NNASKVEHEASTSKIGEDQLFYFAQRGISPEDAISMMISGFCKDVFNQLPMEFAVEADKL 469
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 470 LSMKLEGSVG 479
>gi|291514464|emb|CBK63674.1| Iron-regulated ABC transporter membrane component SufB [Alistipes
shahii WAL 8301]
Length = 481
Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats.
Identities = 321/489 (65%), Positives = 390/489 (79%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + I +YKYGF T+I+ + KGL+E+++R ISAKK EP+WM E R+
Sbjct: 1 MA--ENEKNILENIGEQEYKYGFTTDIETETIGKGLSEEVVRLISAKKGEPEWMTERRVA 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WLT++ P+WA + P IDF D+ YYAAPK S+D+VDPEL RT++KLGIP+
Sbjct: 59 AYRHWLTLEPPTWAHLTIPPIDFQDIIYYAAPKPKKQLGSMDEVDPELKRTFDKLGIPLE 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ LAG VAVDAV DSVSV TTF+E L + G++F ISEA+ + P+LVKKYL +V
Sbjct: 119 EQMALAG-----VAVDAVMDSVSVKTTFREVLAEKGILFCSISEALRDFPELVKKYLGSV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALN+AVF+DGSF YIPKGVRCPMELSTYFRIN GTGQFERTLI+ADEG+Y
Sbjct: 174 VPYTDNFYAALNAAVFSDGSFCYIPKGVRCPMELSTYFRINAAGTGQFERTLIVADEGAY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVE+V +AE+KYSTVQNWYPGD QG+GGIYNFVTKRG
Sbjct: 234 VSYLEGCTAPQRDENQLHAAVVEIVVERDAEVKYSTVQNWYPGDKQGRGGIYNFVTKRGI 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CR +++SWTQ+ETGSAITWKYPSC+L G+ + GEFYS+A++N FQQ D+GTKM+H+ +
Sbjct: 294 CR-ENARLSWTQVETGSAITWKYPSCILAGDNAVGEFYSVAMTNNFQQADTGTKMIHIGR 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT SRIVSKGISAG S N+YRG V V +GA ++RN++QCDSLLIG+ CGAHT P I+ +N
Sbjct: 353 NTRSRIVSKGISAGRSENSYRGMVRVAKGAENARNYSQCDSLLIGDKCGAHTFPVIDVRN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKISD+ LFYC QRG+ E A+ LIVNG+ REVL KLPMEFAVEAQKL+
Sbjct: 413 PTGVVEHEATTSKISDDQLFYCNQRGLSTEDAVGLIVNGYAREVLAKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ LEGSVG
Sbjct: 473 ALQLEGSVG 481
>gi|241760973|ref|ZP_04759062.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241374592|gb|EER64053.1| FeS assembly protein SufB [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 490
Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats.
Identities = 332/490 (67%), Positives = 405/490 (82%), Gaps = 1/490 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + D+Y++GF + + + APKGLNEDI+RFISAKK EP+WMLEWRL
Sbjct: 1 MSETKNEAALEALARNDRYEWGFSSAVDQEFAPKGLNEDIVRFISAKKGEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+RWL M+ P WA+++ P ID+ D YYYAAPK+ +SLD++DPE+ +TYEKLGIPI
Sbjct: 61 AYKRWLEMEMPHWAKLKLPEIDYQDAYYYAAPKAKPKIESLDEIDPEIRKTYEKLGIPIE 120
Query: 121 EQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ++LAGV +VAVDAVFDSVSV TTF+E+L++ GVIF+ ISEAI +P+LVK+YL
Sbjct: 121 EQKVLAGVSGAREVAVDAVFDSVSVATTFREKLQEVGVIFLSISEAIKTYPELVKRYLGR 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DN+++ALNSAVF+DG+FVYIP+GVRCPMELSTYFRIN TGQFERTLI+AD+G+
Sbjct: 181 VVPVRDNYFSALNSAVFSDGTFVYIPEGVRCPMELSTYFRINAANTGQFERTLIVADKGA 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRDENQLHAAVVE+ + AE++YSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 241 YVSYLEGCTAPQRDENQLHAAVVEIFVHEEAEVRYSTVQNWYPGDENGKGGIYNFVTKRA 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G RSK+SWTQ+ETGSAITWKYPSC+L+GE+S GEFYSIA++N +QQ D+GTKM+H+
Sbjct: 301 LCDGARSKVSWTQVETGSAITWKYPSCILKGEESVGEFYSIALTNNYQQADTGTKMIHIG 360
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KN+ S I+SKGISAG S+NTYRG V V A + RNFT+CDSLLIG+ CGAHT+PYIE +
Sbjct: 361 KNSRSTIISKGISAGHSDNTYRGLVKVGGAAENVRNFTRCDSLLIGDKCGAHTVPYIEVR 420
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +EHEATTSKISD+ LFY QRG+ E+ A+ALIVNGF R+VLQKLPMEFA+EAQKL
Sbjct: 421 NPSAKVEHEATTSKISDDELFYARQRGLNEDEAVALIVNGFARDVLQKLPMEFAIEAQKL 480
Query: 480 IDISLEGSVG 489
+ ISLEG+VG
Sbjct: 481 LGISLEGAVG 490
>gi|53711556|ref|YP_097548.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis YCH46]
gi|60679815|ref|YP_209959.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis NCTC 9343]
gi|253564383|ref|ZP_04841840.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 3_2_5]
gi|265764948|ref|ZP_06093223.1| FeS assembly protein SufB [Bacteroides sp. 2_1_16]
gi|52214421|dbj|BAD47014.1| ABC transporter permease [Bacteroides fragilis YCH46]
gi|60491249|emb|CAH05997.1| putative ABC transporter membrane protein [Bacteroides fragilis
NCTC 9343]
gi|251948159|gb|EES88441.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 3_2_5]
gi|263254332|gb|EEZ25766.1| FeS assembly protein SufB [Bacteroides sp. 2_1_16]
gi|301161338|emb|CBW20878.1| putative ABC transporter SufB protein [Bacteroides fragilis 638R]
Length = 485
Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats.
Identities = 322/490 (65%), Positives = 395/490 (80%), Gaps = 6/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M+ E V+++ ++YKYGF T + D KGLNED++R IS+KKNEP+W+LE+RL
Sbjct: 1 MMQQEEPNKYVKELTQEKYKYGFTTEVHTDIIEKGLNEDVVRLISSKKNEPEWLLEFRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPI 119
AYR WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+
Sbjct: 61 AYRHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPL 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKYL +
Sbjct: 121 EEQMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYLGS 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VV DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ S
Sbjct: 176 VVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDS 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG
Sbjct: 236 YVSYLEGCTAPMRDENQLHAAIVEIMVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+C+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL
Sbjct: 296 NCKGVDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++
Sbjct: 356 KNTRSTIVSKGISAGKSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIH 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEATTSKIS++ +FYC QRGI E AI LIVNG+ +EVL KLPMEFAVEAQKL
Sbjct: 416 NETAVVEHEATTSKISEDQIFYCNQRGISTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKL 475
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 476 LTISLEGSVG 485
>gi|224025204|ref|ZP_03643570.1| hypothetical protein BACCOPRO_01938 [Bacteroides coprophilus DSM
18228]
gi|224018440|gb|EEF76438.1| hypothetical protein BACCOPRO_01938 [Bacteroides coprophilus DSM
18228]
Length = 483
Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats.
Identities = 324/486 (66%), Positives = 394/486 (81%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+E V+++ ++YKYGF T++ D KGLNED++R ISAKK EP+W+LE+RL AYR
Sbjct: 3 QEPNKYVKELTQEKYKYGFTTDVHTDIIEKGLNEDVVRLISAKKGEPEWLLEFRLKAYRH 62
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLTM+ P+WA + P ID+ + YYA P GP+SLD+VDPELL+T+ KLGIP+ EQ
Sbjct: 63 WLTMEMPTWAHLNIPEIDYQAISYYADPTQKKEGPKSLDEVDPELLKTFNKLGIPLEEQM 122
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF +SEA+ EHPDLV+KYL +VV
Sbjct: 123 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSMSEAVREHPDLVRKYLGSVVGY 177
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ SYVSY
Sbjct: 178 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDSYVSY 237
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V LD AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C+G
Sbjct: 238 LEGCTAPMRDENQLHAAIVEIVVLDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKG 297
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 298 VDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNFQQADTGTKMIHLGKNTR 357
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 358 STIVSKGISAGKSQNSYRGLVRVSERADNARNYSQCDSLLLGSQCGAHTFPYMDIHNETA 417
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ LFYC QRGI E AI LIVNG+ +EVL KLPMEFAVEAQKL+ +S
Sbjct: 418 IVEHEATTSKISEDQLFYCNQRGINTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLSVS 477
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 478 LEGSVG 483
>gi|254436785|ref|ZP_05050279.1| FeS assembly protein SufB [Octadecabacter antarcticus 307]
gi|198252231|gb|EDY76545.1| FeS assembly protein SufB [Octadecabacter antarcticus 307]
Length = 520
Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats.
Identities = 341/494 (69%), Positives = 404/494 (81%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD V+ + YK+G+ T+I+++ AP GL+EDI+R IS K EP WML+WRL AY R
Sbjct: 28 QDTVDAVQAL-SGTYKHGWNTDIEMEYAPLGLSEDIVRLISEKNEEPQWMLDWRLAAYAR 86
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLTM++P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 87 WLTMQEPDWAMVDYPKIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 146
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVS+ TTFK+EL K+GVIF ISEAI +HP+LV+K
Sbjct: 147 ILAGVEGAEDLTDAPRKVAVDAVFDSVSLGTTFKDELAKAGVIFCSISEAIKDHPELVRK 206
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TV+P DN+YA LN+AVF+DGSFVYIPKG +CPMELSTYFRIN + TGQFERTLIIA
Sbjct: 207 YLGTVIPATDNYYACLNAAVFSDGSFVYIPKGTKCPMELSTYFRINAENTGQFERTLIIA 266
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DEGS VSYLEGCTAP+RD QLHAA VEL+ +D+AEIKYSTVQNW+PGD G GGIYNFV
Sbjct: 267 DEGSSVSYLEGCTAPKRDIAQLHAACVELILMDDAEIKYSTVQNWFPGDENGVGGIYNFV 326
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 327 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 386
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 387 VHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGDKCGAHTVPY 446
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF +EVLQ LPMEFA+E
Sbjct: 447 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAME 506
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 507 AQALVAISLEGSVG 520
>gi|209527510|ref|ZP_03276013.1| FeS assembly protein SufB [Arthrospira maxima CS-328]
gi|209492059|gb|EDZ92411.1| FeS assembly protein SufB [Arthrospira maxima CS-328]
Length = 478
Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats.
Identities = 302/479 (63%), Positives = 382/479 (79%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + YKYGF T+I+ D PKGL+ED++R ISAKKNEP++ML +RL AY++W M +
Sbjct: 5 VKTLVNQPYKYGFVTDIESDTIPKGLSEDVVRLISAKKNEPEFMLNFRLRAYQQWQKMAE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+W + YP ID+ D+ YY+APK SL++VDP L+ T+EKLGIP+ EQ+ LA
Sbjct: 65 PTWPHVHYPPIDYQDIIYYSAPKVEKKKGSLEEVDPTLIETFEKLGIPLSEQKRLA---- 120
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVS+ TTFKE+L + GVIF ISEA+ HP+L++KYL +VVPVGDN++AA
Sbjct: 121 -NVAVDAVFDSVSIATTFKEKLAEEGVIFCSISEAVESHPELIEKYLGSVVPVGDNYFAA 179
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV+CPM+LSTYFRIN +GQFERTLI+A+ GS V+YLEGCTAP
Sbjct: 180 LNSAVFSDGSFVYIPKGVKCPMDLSTYFRINNGESGQFERTLIVAESGSSVTYLEGCTAP 239
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVELVALDNA I+YSTVQNW+ GD GKGGIYNFVTKRG C+G+ SKISW
Sbjct: 240 MFDTNQLHAAVVELVALDNATIEYSTVQNWFAGDENGKGGIYNFVTKRGLCKGVNSKISW 299
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SKG
Sbjct: 300 TQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNCQQADTGTKMVHIGKNTRSTIISKG 359
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A +RN++QCDS+LIG+ A+T PYI+ +NS+ +EHEA+
Sbjct: 360 ISAGRSANSYRGLVKMGPKAVGARNYSQCDSMLIGDCGQANTFPYIQVENSTAKVEHEAS 419
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFY QRGI EE A+++I++GF ++V KLPMEFA EA KL+ + LEG+VG
Sbjct: 420 TSKIGEDQLFYFTQRGISEEDAVSMIISGFCKDVFNKLPMEFAAEADKLLSLKLEGAVG 478
>gi|332284500|ref|YP_004416411.1| hypothetical protein PT7_1247 [Pusillimonas sp. T7-7]
gi|330428453|gb|AEC19787.1| hypothetical protein PT7_1247 [Pusillimonas sp. T7-7]
Length = 495
Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats.
Identities = 327/489 (66%), Positives = 395/489 (80%), Gaps = 6/489 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
V+ D + +Y GF T I+ PKGL+ED IR +SAKK EP++MLEWRL A
Sbjct: 12 TVVKPAADPIESFLDREYSAGFVTEIESVTIPKGLSEDTIRLLSAKKGEPEFMLEWRLAA 71
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIR 120
YR WLTM P WA++ +PAIDF D+ YY+APKS GP+SLD+VDPELLRTYEKLG+P+
Sbjct: 72 YRHWLTMDLPEWAKVSFPAIDFQDISYYSAPKSKKDGPKSLDEVDPELLRTYEKLGVPLH 131
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG VAVDAVFDSVSV TTF+++L + GVIF SEA+ E+P+LV+KYL +V
Sbjct: 132 ERARLAG-----VAVDAVFDSVSVATTFRKQLAEVGVIFCSFSEAVKEYPELVRKYLGSV 186
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP GDNFYAALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN + TGQFERTLIIA+EG+
Sbjct: 187 VPPGDNFYAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAQDTGQFERTLIIAEEGAS 246
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALD+A+IKYSTVQNWYPGD GKGGIYNFVTKRGD
Sbjct: 247 VSYLEGCTAPMRDENQLHAAVVELVALDDAKIKYSTVQNWYPGDKDGKGGIYNFVTKRGD 306
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RS+ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A+SN QQ D+GTKM+H+ +
Sbjct: 307 CRGARSRISWTQVETGSAITWKYPSVILRGDDSIGEFYSVALSNHRQQADTGTKMIHIGR 366
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG +N YRG V + A ++RN+TQCDSLLIG+ C AHT P +E +N
Sbjct: 367 NTRSTIISKGISAGHGSNAYRGLVRITPKAENARNYTQCDSLLIGSKCAAHTFPTMEVQN 426
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S ++EHEAT S+I ++ LFY +QRG+ E A+++IVNGF +EV ++LPMEFAVEAQ L+
Sbjct: 427 PSASVEHEATASRIGEDQLFYAMQRGLSAEDAVSMIVNGFCKEVFKELPMEFAVEAQNLL 486
Query: 481 DISLEGSVG 489
+SLEGSVG
Sbjct: 487 GVSLEGSVG 495
>gi|124005860|ref|ZP_01690698.1| FeS assembly protein SufB [Microscilla marina ATCC 23134]
gi|123988543|gb|EAY28184.1| FeS assembly protein SufB [Microscilla marina ATCC 23134]
Length = 481
Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats.
Identities = 325/486 (66%), Positives = 393/486 (80%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + D + + YKYGFET I+ + APKGL+E+ IRFISAKKNEP+WMLEWRL A+
Sbjct: 1 MSKETDILEEHINSDYKYGFETKIETESAPKGLDENTIRFISAKKNEPEWMLEWRLAAFA 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+W TM +P+W + +P ID+ D+ YYAAPK +LD+VDPELL+T+EKLGI + EQ+
Sbjct: 61 QWKTMTEPNWQNVDFPKIDYQDIIYYAAPKKKAKLNNLDEVDPELLKTFEKLGISLEEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L GV V + TTFKE+L + G+IF +SEA+ EHP+LV+KYL VVP
Sbjct: 121 RLTGVAVDAVVDSVS-----ITTTFKEKLGELGIIFCSMSEALQEHPELVRKYLGKVVPT 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN++AALNSAVF+DGSF YIPKGVRCPMELSTYFRIN GTGQFERTLI+ADEGSYVSY
Sbjct: 176 NDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINTAGTGQFERTLIVADEGSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVEL+A+DNAEIKYSTVQNWYPGD GKGGIYNFVTKRG C G
Sbjct: 236 LEGCTAPMRDENQLHAAVVELIAMDNAEIKYSTVQNWYPGDKNGKGGIYNFVTKRGICDG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+H+ KNT
Sbjct: 296 VNSKISWTQVETGSAITWKYPSCILKGDNSIGEFYSVAVTNNYQQADTGTKMIHIGKNTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S N YRG+V V + A ++RN++QCDSLL+G+ CGAHT PYIE+ N +
Sbjct: 356 SRIVSKGISAGHSQNAYRGQVKVMKRAHNARNYSQCDSLLMGDLCGAHTFPYIEADNPTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ LFYC QRGI EAA+ALIVNG+ +EVL++LPMEFAVEAQKL+ IS
Sbjct: 416 VIEHEATTSKIGEDQLFYCTQRGIDPEAAVALIVNGYAKEVLKQLPMEFAVEAQKLLAIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|86138296|ref|ZP_01056870.1| FeS assembly protein SufB [Roseobacter sp. MED193]
gi|85824821|gb|EAQ45022.1| FeS assembly protein SufB [Roseobacter sp. MED193]
Length = 511
Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats.
Identities = 348/494 (70%), Positives = 408/494 (82%), Gaps = 11/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD V ++ YKYG+ET+I+++ APKGL DI+R IS K EP+WML WRL AY R
Sbjct: 20 QETVDAVAEV--STYKYGWETDIEMEYAPKGLTTDIVRLISEKNEEPEWMLNWRLEAYDR 77
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WL ++PSWA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY+KLGIP++EQ
Sbjct: 78 WLQKEEPSWAMVDYPEIDFQDQYYYARPKSMEVKPKSLDEVDPKLLETYKKLGIPLKEQM 137
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 138 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKK 197
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVYIP GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 198 YLGSVVPVSDNFYATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINAENTGQFERTLIIA 257
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 258 DKGSYVSYLEGCTAPARDIAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 317
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D+GTKM
Sbjct: 318 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNMQQADTGTKM 377
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL ++T SRIVSKGISAG + NTYRG VS+H A + RNFTQCDSLLIG+ CGAHT+PY
Sbjct: 378 VHLGRDTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNGRNFTQCDSLLIGDKCGAHTVPY 437
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC QRGI EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 438 IEVKNNSSRVEHEATTSKVDDDQLFYCRQRGIGEEDAVALVVNGFCKDVLQALPMEFAME 497
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 498 AQQLVAISLEGSVG 511
>gi|149376032|ref|ZP_01893798.1| component of SufBCD complex [Marinobacter algicola DG893]
gi|149359669|gb|EDM48127.1| component of SufBCD complex [Marinobacter algicola DG893]
Length = 482
Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats.
Identities = 335/487 (68%), Positives = 398/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ T +V ++ +Y++GF T+I+ D GLNED+I +SA K EP+WMLEWRL AYR
Sbjct: 1 MATTDKEVNELIKREYEHGFVTDIEADTFEPGLNEDVIARLSAIKKEPEWMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQ 122
RWL M +P WA + YP ID++ + YY+APK PQSLD+VDPELL+TYEKLGIP+ E+
Sbjct: 61 RWLEMDEPDWAHVGYPKIDYNSISYYSAPKRKEDMPQSLDEVDPELLKTYEKLGIPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAG VAVDAVFDSVSV TTFKE L K+GVIF ISEAI ++P+LVKKYL +VVP
Sbjct: 121 EKLAG-----VAVDAVFDSVSVATTFKEPLAKAGVIFCSISEAIQDYPELVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNF+A LNSAVF+DG+FVY+PKGVRCPMELSTYFRIN TGQFERTLIIA++ SYVS
Sbjct: 176 AGDNFFAGLNSAVFSDGTFVYVPKGVRCPMELSTYFRINAANTGQFERTLIIAEDSSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVALD+A+IKYSTVQNWYPGD GKGGI+NFVTKRG
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALDDAQIKYSTVQNWYPGDENGKGGIFNFVTKRGAAI 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSA+TWKYPSC+LRG+ S GEFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 GKNSKISWTQVETGSAVTWKYPSCVLRGDNSVGEFYSVALTNNFQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I+SKGISAG S+N YRG V GA +RN+TQCDSLLIG+ CGAHT PYIESKN S
Sbjct: 356 SSTIISKGISAGKSSNAYRGLVKFGPGAEGARNYTQCDSLLIGDRCGAHTFPYIESKNKS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSK+SDE +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++
Sbjct: 416 AIVEHEATTSKVSDEQMFLCRQRGIDPEQAVSMIVNGFCKEVFKELPMEFAVEAGKLLEV 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|189465084|ref|ZP_03013869.1| hypothetical protein BACINT_01428 [Bacteroides intestinalis DSM
17393]
gi|224536661|ref|ZP_03677200.1| hypothetical protein BACCELL_01537 [Bacteroides cellulosilyticus
DSM 14838]
gi|189437358|gb|EDV06343.1| hypothetical protein BACINT_01428 [Bacteroides intestinalis DSM
17393]
gi|224521752|gb|EEF90857.1| hypothetical protein BACCELL_01537 [Bacteroides cellulosilyticus
DSM 14838]
Length = 485
Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats.
Identities = 318/487 (65%), Positives = 396/487 (81%), Gaps = 7/487 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T++ + +GLNED++R ISAKKNEP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTDVHTEVIERGLNEDVVRLISAKKNEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP--KSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM+ P+WA +R P ID+ + YYA P K P+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTMEMPTWAHLRIPEIDYQAISYYADPLAKKKDAPKSMDEVDPELIKTFNKLGIPLEEQ 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
L+G +AVDAV DSVSV TTFKE L + G+IF ISEA+ EHPDLV+KYL +VV
Sbjct: 124 MALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSISEAVREHPDLVQKYLGSVVG 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVS
Sbjct: 179 YRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAA+VE+V + AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C+
Sbjct: 239 YLEGCTAPMRDENQLHAAIVEIVVHERAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCK 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 GANSKLSWTQVETGSAITWKYPSCILTGDNSSAEFYSVAVTNNYQQADTGTKMIHLGKNT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 SSTIVSKGISAGHSENSYRGLVRVAQKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNET 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKI+++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ I
Sbjct: 419 AVVEHEATTSKINEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLAI 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|120556061|ref|YP_960412.1| cysteine desulfurase activator complex subunit SufB [Marinobacter
aquaeolei VT8]
gi|120325910|gb|ABM20225.1| Iron-regulated ABC transporter membrane component SufB
[Marinobacter aquaeolei VT8]
Length = 482
Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats.
Identities = 338/487 (69%), Positives = 402/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ T ++V+++ +Y++GF T I+ D GLNED+I +SA K EP+WMLEWRL AYR
Sbjct: 1 MATTDNEVKELIKREYEHGFVTEIEADTFEPGLNEDVIARLSAIKKEPEWMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQ 122
RWL M++P+WA + YP +D++ + YY+APK PQSLD+VDPELL+TYEKLGIP+ E+
Sbjct: 61 RWLEMEEPNWAHVGYPKVDYNSISYYSAPKRKEDMPQSLDEVDPELLKTYEKLGIPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAG VAVDAVFDSVSV TTFKE L K+GVIF ISEA+ ++P+LV+KYL TVVP
Sbjct: 121 EKLAG-----VAVDAVFDSVSVATTFKEPLAKAGVIFCSISEAVRDYPELVQKYLGTVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNF+A LNSAVF+DG+FVY+PKGVRCPMELSTYFRIN TGQFERTLIIADEGSYVS
Sbjct: 176 HGDNFFAGLNSAVFSDGTFVYVPKGVRCPMELSTYFRINAANTGQFERTLIIADEGSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVALD+A+IKYSTVQNWYPGD GKGGIYNFVTKRG C
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALDDAQIKYSTVQNWYPGDENGKGGIYNFVTKRGACI 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSA+TWKYPSC+LRGE S GEFYS+A+++ +QQ D+GTKM+HL KNT
Sbjct: 296 GKNSKISWTQVETGSAVTWKYPSCVLRGENSVGEFYSVALTHNYQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG S+N YRG V GA +RNFTQCDSLLIG+ CGAHT PYIESKN S
Sbjct: 356 RSTIISKGISAGKSSNAYRGLVKFGPGAEGARNFTQCDSLLIGDRCGAHTFPYIESKNKS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSK+SDE +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++
Sbjct: 416 AIVEHEATTSKVSDEQMFLCRQRGIDPEQAVSMIVNGFCKEVFKELPMEFAVEAGKLLEV 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|298490170|ref|YP_003720347.1| FeS assembly protein SufB ['Nostoc azollae' 0708]
gi|298232088|gb|ADI63224.1| FeS assembly protein SufB ['Nostoc azollae' 0708]
Length = 479
Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats.
Identities = 314/480 (65%), Positives = 389/480 (81%), Gaps = 6/480 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + YKYGF T+I+ D P+GLNED+IR ISAKKNEP++MLE+RL AY +WL M +
Sbjct: 5 VKTLVNQPYKYGFVTDIEADTIPRGLNEDVIRLISAKKNEPEFMLEYRLRAYHQWLKMIE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
PSW + YP I++ D+ YY+APK SLD+VDP LL T+EKLGIP+ EQ+ L+
Sbjct: 65 PSWPHVTYPPINYQDIIYYSAPKQKKAKLNSLDEVDPTLLETFEKLGIPLNEQKRLS--- 121
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDA+FDSVSV TTFKE L K GVIF ISEA+ EHP+L+KKYL +VVP+ DN++A
Sbjct: 122 --NVAVDAIFDSVSVATTFKENLAKDGVIFCSISEALQEHPELIKKYLGSVVPIADNYFA 179
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALN+AVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLIIA+EGSYVSYLEGCTA
Sbjct: 180 ALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIIAEEGSYVSYLEGCTA 239
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D NQLHAAVVELVALDNAEIKYSTVQNWY GD+ GKGGIYNFVTKRG C+G+ SKIS
Sbjct: 240 PMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRGLCQGVNSKIS 299
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SK
Sbjct: 300 WTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNMQQADTGTKMIHIGKNTRSTIISK 359
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S+N+YRG V ++ A +RN++QCDS+LIG+N A+T PYI+ +N++ +EHEA
Sbjct: 360 GISAGKSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAQANTFPYIQVQNNNGKVEHEA 419
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI ++ LF+ QRGI E AI+++++GF ++V +LPMEFAVEA KL+ + LEGSVG
Sbjct: 420 STSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEANKLLSLKLEGSVG 479
>gi|307544374|ref|YP_003896853.1| Fe-S cluster assembly protein SufB [Halomonas elongata DSM 2581]
gi|307216398|emb|CBV41668.1| K09014 Fe-S cluster assembly protein SufB [Halomonas elongata DSM
2581]
Length = 480
Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats.
Identities = 321/482 (66%), Positives = 391/482 (81%), Gaps = 6/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++ ++ +YK GF T+I+ + P GL+ED I FIS KK EP+WMLEWRL AY +WL M
Sbjct: 4 QEMEELVRREYKEGFVTDIESETVPPGLDEDTIAFISKKKGEPEWMLEWRLKAYHQWLKM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPK-SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
PSWA + YP ID+ + YY+APK PQSLD+VDP+LL TYEKLGIP+ E+ LAG
Sbjct: 64 TPPSWAHLNYPPIDYQAISYYSAPKRPEDRPQSLDEVDPKLLETYEKLGIPLHERAALAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTFKE+L+++GVIF ISEAI ++P+LV++YL +VVP GDN+
Sbjct: 124 -----VAVDAVFDSVSVTTTFKEKLQEAGVIFCSISEAIRDYPELVQQYLGSVVPQGDNY 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFV++P+GV CPMELSTYFRIN TGQFERTLI+ + + VSYLEGC
Sbjct: 179 FAALNSAVFTDGSFVFVPEGVTCPMELSTYFRINAANTGQFERTLIVCESRAEVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVAL++A+IKYSTVQNWYPGD GKGGIYNFVTKRGDCRG RS
Sbjct: 239 TAPQRDENQLHAAVVELVALEDAKIKYSTVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSH 298
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++NG QQ D+GTKM+H+ + T S IV
Sbjct: 299 ISWTQVETGSAITWKYPSCVLRGKDSVGEFYSVAVTNGRQQADTGTKMIHIGEGTRSTIV 358
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGI+AG S+ +YRG V V A ++RNFTQCDSLLIG+ CGAHT PY E NSS +EH
Sbjct: 359 SKGIAAGRSDQSYRGLVKVGPRAKNARNFTQCDSLLIGDTCGAHTFPYQEIGNSSAKVEH 418
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKI ++ LFYC RGI EE A+ +IVNGF ++V Q+LPMEFAVEA+ L++++LEG+
Sbjct: 419 EATTSKIGEDQLFYCQSRGIGEEDAVNMIVNGFCKDVFQELPMEFAVEAEALLNVTLEGA 478
Query: 488 VG 489
VG
Sbjct: 479 VG 480
>gi|254430711|ref|ZP_05044414.1| FeS assembly protein SufB [Cyanobium sp. PCC 7001]
gi|197625164|gb|EDY37723.1| FeS assembly protein SufB [Cyanobium sp. PCC 7001]
Length = 479
Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats.
Identities = 304/480 (63%), Positives = 375/480 (78%), Gaps = 5/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V + YKYGF T+I+ DK KGL+ED++R ISAKKNEP+++L++RL A+R WLTM
Sbjct: 5 TVGDLVSQPYKYGFVTDIETDKIAKGLSEDVVRLISAKKNEPEFLLDFRLRAFRHWLTMV 64
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P WA + YP ID+ D+ YYAAP+ SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 65 EPDWAALGYPRIDYQDIIYYAAPRQQDKKSSLDEVDPKLLETFDKLGIPLSEQKRLS--- 121
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVS+ TTFKE+L + GVIF ISEA+ +HPDL++ YL TVVP DNF+A
Sbjct: 122 --NVAVDAVFDSVSIATTFKEQLAEHGVIFCSISEAVKDHPDLIEAYLGTVVPTNDNFFA 179
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEGCTA
Sbjct: 180 ALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEGCTA 239
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RSKIS
Sbjct: 240 PMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGDRSKIS 299
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S IVSK
Sbjct: 300 WTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNHQQADTGTKMIHVGPRTRSTIVSK 359
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ +EHEA
Sbjct: 360 GISAGHSSNSYRGLVQIGPKAVGARNYSQCDSMLIGDQAAANTYPYIRSQQPDAAVEHEA 419
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 420 STCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG 479
>gi|254485515|ref|ZP_05098720.1| FeS assembly protein SufB [Roseobacter sp. GAI101]
gi|214042384|gb|EEB83022.1| FeS assembly protein SufB [Roseobacter sp. GAI101]
Length = 504
Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats.
Identities = 345/494 (69%), Positives = 409/494 (82%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YK+G+ T+I++D AP GLNEDI++ IS K EP+WMLEWRL AY+R
Sbjct: 12 QETVDAVREVG-GAYKHGWSTDIEMDYAPLGLNEDIVKLISGKNEEPEWMLEWRLAAYQR 70
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT +P WA + YP IDF + YYYA PKS+ P+SLD+VDP+LL TY KLGIP++EQ
Sbjct: 71 WLTKNEPDWAMVDYPKIDFQEQYYYARPKSMAVKPKSLDEVDPKLLATYAKLGIPLKEQM 130
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+LAGV+ KVAVDAVFDSVSV TTF++ELK +GVIF ISEAI +HP+LVKK
Sbjct: 131 LLAGVEGAEELTDAPRKVAVDAVFDSVSVGTTFQKELKAAGVIFCSISEAIRDHPELVKK 190
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 191 YLGSVVPVNDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 250
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRDE+QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 251 DKGSYVSYLEGCTAPQRDESQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 310
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 311 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 370
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 371 IHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKESRNYTQCDSLLIGSECGAHTVPY 430
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ LFYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 431 IEVKNNSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFAME 490
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 491 AQALVAISLEGSVG 504
>gi|325919609|ref|ZP_08181621.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
gardneri ATCC 19865]
gi|325549945|gb|EGD20787.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
gardneri ATCC 19865]
Length = 485
Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats.
Identities = 317/487 (65%), Positives = 386/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++ +Y GF T+I+ D P GL+ED+IR +SAKK EP WM +WRL AY
Sbjct: 6 APPQNAEIIERLGR-RYDAGFITDIESDSLPPGLDEDVIRALSAKKEEPQWMTDWRLEAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA+++ IDF L YY+APK SLDDV ELL TY+KLG+P+ E+
Sbjct: 65 RHWLKMPMPEWAKLQISPIDFQALSYYSAPKG-PKYASLDDVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++VK+YL +VVP
Sbjct: 124 ARLAG-----VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVKQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVS
Sbjct: 179 VGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV L++AEIKYSTVQNWYPGD G GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDENGVGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T
Sbjct: 299 GDRSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN
Sbjct: 359 KSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPG 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEV 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|85703166|ref|ZP_01034270.1| FeS assembly protein SufB [Roseovarius sp. 217]
gi|85672094|gb|EAQ26951.1| FeS assembly protein SufB [Roseovarius sp. 217]
Length = 507
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 346/494 (70%), Positives = 412/494 (83%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
RETVD VR++ + YK+G+ T+I+++ AP GLNEDI+R IS+K EP+WM EWRL AYRR
Sbjct: 15 RETVDAVRQVG-EAYKHGWNTDIEMEYAPLGLNEDIVRLISSKNEEPEWMTEWRLEAYRR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT +P WA + YP IDF YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 74 WLTKTEPEWAMVDYPKIDFQAQYYYARPKSMEVKPKSLDEVDPKLLATYEKLGIPLKEQM 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVSV TTF+ EL+++GVIF ISEAI EHP+LVKK
Sbjct: 134 ILAGVEGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELRRAGVIFCSISEAIREHPELVKK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAP+RD QLHAAVVE++ ++AE+KYSTVQNWYPGD GKGGIYNFV
Sbjct: 254 DKGSYVSYLEGCTAPKRDVAQLHAAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG R+K+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N +QQ D+GTKM
Sbjct: 314 TKRADCRGDRAKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNYQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 IHLGKNTRSRIVSKGISAGHAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDQCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSK+ D+ +FYC RG+ EE A+AL+VNGF ++VLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKVDDDQMFYCRARGMDEEEAVALVVNGFCKDVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ+L+ ISLEGSVG
Sbjct: 494 AQQLVAISLEGSVG 507
>gi|325982999|ref|YP_004295401.1| FeS assembly protein SufB [Nitrosomonas sp. AL212]
gi|325532518|gb|ADZ27239.1| FeS assembly protein SufB [Nitrosomonas sp. AL212]
Length = 478
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 316/489 (64%), Positives = 391/489 (79%), Gaps = 11/489 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ++ + YK+GF T I+ D APKGLNEDIIR ISAKKNEP+W+L +RL
Sbjct: 1 MSAV------LQSLVNQPYKHGFVTKIESDVAPKGLNEDIIRLISAKKNEPEWLLSFRLE 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY++WLTMK+P W + YP IDF + YY+APK S+D+VDPELLRT+EKLG+P+
Sbjct: 55 AYQKWLTMKEPEWQNVHYPKIDFQAISYYSAPKPKKKLASMDEVDPELLRTFEKLGVPMH 114
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG VAVD +FDSVSV TT+K++L + G+IF ISEA+ HP+L+++YL TV
Sbjct: 115 ERAALAG-----VAVDVIFDSVSVATTYKQKLAEVGIIFCSISEAVHNHPELIQRYLGTV 169
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPVGDN++AALNSAVFTDGSF +IPKGV+CPM+LSTYFRIN +G+GQFERTLIIA+E +
Sbjct: 170 VPVGDNYFAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEGSGQFERTLIIAEEDAT 229
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+ D NQLHAAVVELVALDNA+IKYSTVQNWY GD G GGIYNFVTKRG
Sbjct: 230 VSYLEGCTAPRFDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGIGGIYNFVTKRGL 289
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+G S+ISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++N +QQ D+GTKM+HL K
Sbjct: 290 AKGKNSRISWTQVETGSAITWKYPSCILRGDNSVGEFYSVAVTNNYQQADTGTKMIHLGK 349
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S IVSKGISAG SN++YRG V + A +RN++QCDS+LIG+ CGAHT PYI+ N
Sbjct: 350 NTRSTIVSKGISAGHSNSSYRGLVRISPTAEGARNYSQCDSMLIGDQCGAHTFPYIQVHN 409
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+S +EHEA+TSKI ++ LFY QRGI E A+++I+NGF ++V Q+LPMEFAVEA KL+
Sbjct: 410 NSAIVEHEASTSKIGEDQLFYFSQRGIDAEEAVSMIINGFCKDVFQQLPMEFAVEATKLL 469
Query: 481 DISLEGSVG 489
LEGSVG
Sbjct: 470 SFKLEGSVG 478
>gi|311695875|gb|ADP98748.1| cysteine desulfurase activator complex subunit SufB [marine
bacterium HP15]
Length = 490
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 336/487 (68%), Positives = 398/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ T +V ++ +Y+YGF T+I+ D GLNED+I +S K EP+WMLEWRL AYR
Sbjct: 9 MATTDTEVNELIKREYEYGFVTDIESDTFEPGLNEDVIARLSGLKKEPEWMLEWRLKAYR 68
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQ 122
RWL M +P WA + YP ID++ + YY+APK PQSLD+VDPELL+TYEKLGIP+ E+
Sbjct: 69 RWLEMDEPDWAHVGYPKIDYNSISYYSAPKRPEDMPQSLDEVDPELLKTYEKLGIPLHER 128
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAG VAVDAVFDSVSV TTFKE L K+GVIF ISEAI ++P+LVKKYL +VVP
Sbjct: 129 EKLAG-----VAVDAVFDSVSVATTFKEPLAKAGVIFCSISEAIQDYPELVKKYLGSVVP 183
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNF+A LNSAVF+DG+FVY+PKGVRCPMELSTYFRIN TGQFERTLIIA++ SYVS
Sbjct: 184 AGDNFFAGLNSAVFSDGTFVYVPKGVRCPMELSTYFRINAANTGQFERTLIIAEDSSYVS 243
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVALD+A+IKYSTVQNWYPGD +GKGGI+NFVTKRG
Sbjct: 244 YLEGCTAPMRDENQLHAAVVELVALDDAQIKYSTVQNWYPGDEEGKGGIFNFVTKRGAAI 303
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSA+TWKYPSC+LRGE S GEFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 304 GKNSKISWTQVETGSAVTWKYPSCVLRGENSVGEFYSVALTNNYQQADTGTKMIHLGKNT 363
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I+SKGISAG S+N YRG V GA +RNFTQCDSLLIG+ CGAHT PYIESKN S
Sbjct: 364 SSTIISKGISAGKSSNAYRGLVKFGPGAEGARNFTQCDSLLIGDRCGAHTFPYIESKNKS 423
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSK+SDE +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++
Sbjct: 424 AIVEHEATTSKVSDEQMFLCRQRGIDPEQAVSMIVNGFCKEVFKELPMEFAVEAGKLLEV 483
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 484 SLEGSVG 490
>gi|209516299|ref|ZP_03265156.1| FeS assembly protein SufB [Burkholderia sp. H160]
gi|209503235|gb|EEA03234.1| FeS assembly protein SufB [Burkholderia sp. H160]
Length = 482
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 319/487 (65%), Positives = 398/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ +V ++ ++ +Y++GF TN++ D P+G++ED+IR ISAKKNEPD+MLEWRL AYR
Sbjct: 1 MSSSVSRIDELIQREYQHGFVTNVKSDTLPRGVSEDVIRLISAKKNEPDFMLEWRLAAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM +P WA + +P ID+ D+ YY+AP P+SL++VDPELLRTYEKLG+P++E+
Sbjct: 61 HWLTMNEPHWATVEHPPIDYQDIAYYSAPMAQKNRPRSLEEVDPELLRTYEKLGVPLKER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
EILAG VAVDAVFDSVSV TTF E+L G++F SEA+ HPDLV++YL +VVP
Sbjct: 121 EILAG-----VAVDAVFDSVSVATTFGEKLGALGIVFCSFSEAVQTHPDLVRRYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+AALNSAVF+DGSF YIP GVRCP+ELSTYFRIN + TGQFERTLIIAD+G+YVS
Sbjct: 176 HTDNFFAALNSAVFSDGSFCYIPPGVRCPVELSTYFRINAQNTGQFERTLIIADKGAYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVAL+ A+I+YSTVQNWYPGD+ G+GGIYNFVTKRGDCR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALEGAQIRYSTVQNWYPGDAHGRGGIYNFVTKRGDCR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
SKISWTQ+ETGSAITWKYPS +L+G+ + GEFYS+A++N +QQ D+GTKM HL +NT
Sbjct: 296 EANSKISWTQVETGSAITWKYPSVILQGDNAVGEFYSVALTNNYQQADTGTKMTHLGRNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG +N YRG V + R A +RN+TQCDSLL+G+ C A T PYIE KN +
Sbjct: 356 RSTILSKGISAGHGSNAYRGLVKIARAAEDARNYTQCDSLLLGDRCSALTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TS+I ++ LFYC QRG+ EE A+++IVNGF REVL++LPMEFAVEAQKL+ +
Sbjct: 416 AKVEHEASTSRIGEDQLFYCRQRGVSEEDAVSMIVNGFCREVLKELPMEFAVEAQKLLGV 475
Query: 483 SLEGSVG 489
SLEGS G
Sbjct: 476 SLEGSTG 482
>gi|325299863|ref|YP_004259780.1| FeS assembly protein SufB [Bacteroides salanitronis DSM 18170]
gi|324319416|gb|ADY37307.1| FeS assembly protein SufB [Bacteroides salanitronis DSM 18170]
Length = 483
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 322/485 (66%), Positives = 395/485 (81%), Gaps = 6/485 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
E V+++ ++YKYGF T++Q D KGLNED++R ISAKK EPDW+L++RL A+R W
Sbjct: 4 EPNKYVKELTQEKYKYGFTTDVQTDIIEKGLNEDVVRLISAKKQEPDWLLDFRLKAFRYW 63
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
T++ P+WA + P ID+ + YYA P K GP+SL+DVDPELL+T+ KLGIP+ EQ
Sbjct: 64 QTLEMPTWAHLTIPEIDYQAISYYADPTKKKDGPKSLEDVDPELLKTFNKLGIPLEEQLA 123
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
L+G +AVDAV DSVSV TTFKE L + G+IF +SEA+ EHPDLVKKYL +VV
Sbjct: 124 LSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSMSEAVREHPDLVKKYLGSVVGYR 178
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ SYVSYL
Sbjct: 179 DNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDSYVSYL 238
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP RDENQLHAA+VE+V ++ AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C+G
Sbjct: 239 EGCTAPMRDENQLHAAIVEIVVMNRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGR 298
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N FQQ D+GTKM+HL KNT S
Sbjct: 299 DSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNFQQADTGTKMIHLGKNTRS 358
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G++CGAHT PY++ N +
Sbjct: 359 TIVSKGISAGRSQNSYRGLVRVSEKADNARNYSQCDSLLLGSHCGAHTFPYMDIHNETAV 418
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ +SL
Sbjct: 419 VEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLSVSL 478
Query: 485 EGSVG 489
EGSVG
Sbjct: 479 EGSVG 483
>gi|217970312|ref|YP_002355546.1| FeS assembly protein SufB [Thauera sp. MZ1T]
gi|217507639|gb|ACK54650.1| FeS assembly protein SufB [Thauera sp. MZ1T]
Length = 502
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 326/482 (67%), Positives = 395/482 (81%), Gaps = 6/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D + Y GFET + D PKGL+ED+IR ISA+K EP+W+L+WRL AYR WLTM
Sbjct: 26 DAIGAFLEQDYAAGFETTLDTDTVPKGLSEDVIRMISARKGEPEWLLDWRLEAYRHWLTM 85
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+WA +++PA+DF D+ YY+APKS GP+SLD+VDPELLRT+EKLG+P+ E+ LAG
Sbjct: 86 SPPTWAAVQFPAVDFQDIVYYSAPKSKKDGPKSLDEVDPELLRTFEKLGVPLHERARLAG 145
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTFK+EL GVIF SEA+ EHP+LV+KYL TVVP GDNF
Sbjct: 146 -----VAVDAVFDSVSVATTFKKELGAHGVIFCSFSEAVKEHPELVRKYLGTVVPPGDNF 200
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN + TGQFERTLIIA+EG+ VSYLEGC
Sbjct: 201 YAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINARDTGQFERTLIIAEEGASVSYLEGC 260
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVEL+ALD+A+IKYSTVQNWYPGD GKGGIYNFVTKRGDCRG RS
Sbjct: 261 TAPMRDENQLHAAVVELIALDDAKIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGARSH 320
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S G+F+S+A++N QQ D+GTKM+H+ +NT S I+
Sbjct: 321 ISWTQVETGSAITWKYPSVILRGDDSVGDFHSVALTNNLQQADTGTKMIHMGRNTRSTIL 380
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG +NT+RG V + A +RN+TQCDSLLIG+ C AHT P IE ++ + ++EH
Sbjct: 381 SKGISAGRGSNTFRGLVKITPKAEGARNYTQCDSLLIGDRCAAHTFPTIEVRHPTAHVEH 440
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTS+I ++ LFY +QRGI E A+++IVNGF REV ++LPMEFAVEAQKL+ +SLEGS
Sbjct: 441 EATTSRIGEDQLFYAMQRGISAEDAVSMIVNGFCREVFKELPMEFAVEAQKLLGVSLEGS 500
Query: 488 VG 489
VG
Sbjct: 501 VG 502
>gi|304321530|ref|YP_003855173.1| hypothetical protein PB2503_09894 [Parvularcula bermudensis
HTCC2503]
gi|303300432|gb|ADM10031.1| hypothetical protein PB2503_09894 [Parvularcula bermudensis
HTCC2503]
Length = 507
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 344/496 (69%), Positives = 410/496 (82%), Gaps = 15/496 (3%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
TVD VR ++ YKYGF T+I+ +APKGL+E+ +R+ISAKK EP+WML+WRL A+RRW
Sbjct: 14 TVDAVRSLET--YKYGFTTDIESVRAPKGLSEETVRYISAKKEEPEWMLDWRLQAFRRWQ 71
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
M +P+W ++ YP ID+ D YYYA PK+ +S+DDV E+L +EKLGIP++E E+L
Sbjct: 72 KMTEPNWQKVTYPPIDYQDQYYYAEPKAGAKYESIDDVPAEILADFEKLGIPLKEAEVLL 131
Query: 127 GVQT-------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
GV+ VAVDAVFDSVSV TTFK+EL+K+GV+FM ISEAI EHPDLV
Sbjct: 132 GVKGAAETAAGARGDARPGVAVDAVFDSVSVATTFKKELEKAGVLFMSISEAIREHPDLV 191
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K+Y+ TVVP DN++A LNSAVF+DG+FVY+P GVRCPMELSTYFRINE TGQFERTLI
Sbjct: 192 KRYIGTVVPPTDNYFATLNSAVFSDGTFVYVPAGVRCPMELSTYFRINEANTGQFERTLI 251
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+AD+G+YVSYLEGCTAP RDENQLHAAVVELVAL++AEIKYSTVQNWYPGD GKGGIYN
Sbjct: 252 VADKGAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQNWYPGDKDGKGGIYN 311
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKR DCRG RSK+SWTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GT
Sbjct: 312 FVTKRADCRGDRSKVSWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAITNNHQQADTGT 371
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KMLHL + T SRI+SKGISAG S+ TYRG VS+ R A +RNFTQCDSLLIG+ CGAHTI
Sbjct: 372 KMLHLGQRTKSRIISKGISAGQSDQTYRGLVSIGRKARGARNFTQCDSLLIGDRCGAHTI 431
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIE K++S LEHEATTSK+S++ LFY QRG+ EEAA+AL+VNGF REVLQ+LPMEFA
Sbjct: 432 PYIEDKSASALLEHEATTSKLSEDQLFYTQQRGLDEEAAVALLVNGFCREVLQELPMEFA 491
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ +SLEGSVG
Sbjct: 492 VEAQKLVAVSLEGSVG 507
>gi|253996499|ref|YP_003048563.1| cysteine desulfurase activator complex subunit SufB [Methylotenera
mobilis JLW8]
gi|253983178|gb|ACT48036.1| FeS assembly protein SufB [Methylotenera mobilis JLW8]
Length = 481
Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats.
Identities = 316/484 (65%), Positives = 391/484 (80%), Gaps = 6/484 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T ++ + +Y++GF T ++ D P GLNE+ +R ISAKKNEP +MLEWRL AY+ WL
Sbjct: 3 TTKQLDALINREYQHGFYTQLEADTIPLGLNENTVRLISAKKNEPAFMLEWRLKAYQHWL 62
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
T+ +P+W + YP ID+ YYY+APKS GP+ L ++DPELLRTYEKLGIP+REQ++L
Sbjct: 63 TLSEPTWPNLHYPPIDYQHAYYYSAPKSEKAGPRDLSEIDPELLRTYEKLGIPLREQQVL 122
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG VAVDAVFDSVSV TTFK++L G+IF P SEA+ +HP+LV++YL +VVP D
Sbjct: 123 AG-----VAVDAVFDSVSVATTFKQKLSTLGIIFCPFSEAVQQHPELVQQYLGSVVPYTD 177
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
NF+A+LN+AVF+DG+F YIP GV+CPMELSTYFRIN K TGQFERTLIIAD+ +YVSYLE
Sbjct: 178 NFFASLNAAVFSDGTFCYIPPGVKCPMELSTYFRINAKNTGQFERTLIIADKDAYVSYLE 237
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP RDENQLHAAVVEL+AL+ A IKY+TVQNWYPGD GKGGIYNFVTKRGDCRG R
Sbjct: 238 GCTAPMRDENQLHAAVVELIALEGARIKYATVQNWYPGDKDGKGGIYNFVTKRGDCRGDR 297
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
S ISWTQ+ETGSAITWKYPS +LRG + GEFYS+A++N QQ D+GTKM+H+ ++T S
Sbjct: 298 SHISWTQVETGSAITWKYPSVILRGNGAIGEFYSVALTNHHQQADTGTKMIHIGRDTKST 357
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
++SKGISAG NTYRG + V GA ++RN+TQCDSLL+GN CGAHT PYIE KN S +
Sbjct: 358 VLSKGISAGHGQNTYRGLIKVLAGAENARNYTQCDSLLLGNQCGAHTFPYIEVKNPSAKV 417
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+TS+I ++ LFYC QRGI E A+++IV+GF + V Q+LPMEFAVEAQKL+ +SLE
Sbjct: 418 EHEASTSRIGEDQLFYCTQRGISPEDAVSMIVSGFCKVVFQELPMEFAVEAQKLLGVSLE 477
Query: 486 GSVG 489
GS G
Sbjct: 478 GSTG 481
>gi|319786705|ref|YP_004146180.1| FeS assembly protein SufB [Pseudoxanthomonas suwonensis 11-1]
gi|317465217|gb|ADV26949.1| FeS assembly protein SufB [Pseudoxanthomonas suwonensis 11-1]
Length = 491
Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats.
Identities = 320/487 (65%), Positives = 392/487 (80%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++ +Y GF T+I+ D P GL+ED+IR +SAKK EP+WM +WRL AY
Sbjct: 12 ATPQNAEILERLGR-RYDAGFVTDIESDSLPPGLDEDVIRALSAKKEEPEWMTQWRLDAY 70
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
RRWL M P WA+++ IDF + YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 71 RRWLGMPVPHWAKLQIAPIDFQSISYYSAPKG-PKYNSLDEVPKELLDTYDKLGVPLHER 129
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTF++EL + G+IF +SEAI EHP+LV+KYL +VVP
Sbjct: 130 AKLAG-----VAVDAVFDSVSVGTTFRKELAEKGIIFCSMSEAIREHPELVQKYLGSVVP 184
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+A+EG+YVS
Sbjct: 185 HGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVAEEGAYVS 244
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CR
Sbjct: 245 YLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECR 304
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T
Sbjct: 305 GARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQADTGTKMIHVGKRT 364
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V V RGA +RN+TQCDSLLIG CGAHT PYIE KN
Sbjct: 365 KSKIVSKGISAGRGQNTYRGLVKVDRGAEGARNYTQCDSLLIGKQCGAHTFPYIEVKNPG 424
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS++ LFYC RGI EE A++LIV+GF ++V ++LPMEFAVEA+KL+++
Sbjct: 425 ATVEHEATTSKISEDQLFYCRSRGISEEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEV 484
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 485 SLEGSVG 491
>gi|170078420|ref|YP_001735058.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. PCC 7002]
gi|34765743|gb|AAQ82447.1| SufB [Synechococcus sp. PCC 7002]
gi|169886089|gb|ACA99802.1| FeS assembly protein SufB [Synechococcus sp. PCC 7002]
Length = 479
Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats.
Identities = 315/490 (64%), Positives = 391/490 (79%), Gaps = 12/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ +K P+GL+ED++R ISAKKNEPD+MLE+RL
Sbjct: 1 MSAT------VKTLVNQPYKYGFVTDIETEKIPRGLSEDVVRLISAKKNEPDFMLEFRLK 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP-QSLDDVDPELLRTYEKLGIPI 119
AY +WL M +P WA ++YP ID+ D+ YYAAPK +SLD++DP LL T+EKLGIP+
Sbjct: 55 AYHQWLKMAEPEWAHVKYPPIDYQDIVYYAAPKKETKKIESLDEIDPALLETFEKLGIPL 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDAVFDSVS+ TTFK++L K GVIF ISEA+ E+PDLVKKYL T
Sbjct: 115 SEQKRLS-----NVAVDAVFDSVSIATTFKKDLAKHGVIFCSISEALQEYPDLVKKYLGT 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++AALNSAVF+DGSFV+IPKGV+CPMELSTYFRIN+ TGQFERTLIIA+EG+
Sbjct: 170 VVPTSDNYFAALNSAVFSDGSFVFIPKGVKCPMELSTYFRINDGETGQFERTLIIAEEGA 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNW+ GD +GKGGIYNFVTKRG
Sbjct: 230 SVSYLEGCTAPMFDTNQLHAAVVELVALDNADIKYSTVQNWFAGDEEGKGGIYNFVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 290 LCKGINSKISWTQVETGSAITWKYPSCVLLGDNSVGEFYSIALTNNHQQADTGTKMIHIG 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KN+ S I+SKGISAG S N+YRG V +H A +RN++QCDS+LIG+ A+T PYI+
Sbjct: 350 KNSRSTIISKGISAGKSKNSYRGLVKMHPKADGARNYSQCDSMLIGDTAEANTFPYIQVD 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEA+T+KI +E LFY QRGI EE AI+++V+GF ++VL +LPMEFA EA KL
Sbjct: 410 NQNAKVEHEASTAKIGEEQLFYFAQRGIAEEDAISMLVSGFCKDVLSELPMEFAAEADKL 469
Query: 480 IDISLEGSVG 489
+ + LEG+VG
Sbjct: 470 LSLKLEGTVG 479
>gi|282900435|ref|ZP_06308385.1| FeS assembly protein SufB [Cylindrospermopsis raciborskii CS-505]
gi|281194748|gb|EFA69695.1| FeS assembly protein SufB [Cylindrospermopsis raciborskii CS-505]
Length = 479
Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats.
Identities = 311/480 (64%), Positives = 387/480 (80%), Gaps = 6/480 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ I YKYGF T+I+ D P+GLNE++IR ISAKK EP++MLE+RL AYR+WL M +
Sbjct: 5 VKTIVNQPYKYGFVTDIETDTIPRGLNEEVIRLISAKKQEPEFMLEFRLRAYRQWLKMTE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGP-QSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA + YP I++ D+ YY+APK SL++VDP LL T+EKLGI + EQ+ LA
Sbjct: 65 PIWAHVNYPPINYQDIVYYSAPKQKKAKLNSLEEVDPTLLETFEKLGISLSEQKRLA--- 121
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDA+FDSVSV TTFKE+L + GVIF ISEA+ EHP+LVKKYL +VVP+ DN++A
Sbjct: 122 --NVAVDAIFDSVSVATTFKEKLAEDGVIFCSISEALREHPELVKKYLGSVVPIADNYFA 179
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLI+A+E SYVSYLEGCTA
Sbjct: 180 ALNSAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEESSYVSYLEGCTA 239
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D NQLHAAVVELVALDNAEIKYSTVQNWY GD GKGGIYNFVTKRG C+G+ SKIS
Sbjct: 240 PMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGVNSKIS 299
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SK
Sbjct: 300 WTQVETGSAITWKYPSCVLVGDNSIGEFYSVALTNNRQQADTGTKMIHIGKNTRSTIISK 359
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S+N+YRG V ++ A +RN++QCDS+LIG+N A+T PYI+ +N++ +EHEA
Sbjct: 360 GISAGKSSNSYRGLVKINPSAKGARNYSQCDSMLIGDNAQANTFPYIQVQNNTGKVEHEA 419
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI ++ LF+ QRGI E A++++++GF ++V +LPMEFAVEA KL+ + LEGSVG
Sbjct: 420 STSKIGEDQLFFFAQRGISAEDAVSMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG 479
>gi|188990791|ref|YP_001902801.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. campestris str. B100]
gi|167732551|emb|CAP50745.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. campestris]
Length = 485
Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats.
Identities = 316/480 (65%), Positives = 384/480 (80%), Gaps = 6/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ + +Y GF T I+ D P GL+EDIIR +SAKK EP WM +WRL AYR WL M
Sbjct: 12 QILERLGRRYDAGFITEIESDSLPPGLDEDIIRALSAKKEEPQWMTDWRLEAYRHWLKMP 71
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA+++ IDF L YY+APK SLDDV ELL TY+KLG+P+ E+ LAG
Sbjct: 72 MPEWAKLKIAPIDFQALSYYSAPKG-PKYASLDDVPKELLDTYDKLGVPLHERARLAG-- 128
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++VK++L +VVPVGDN++A
Sbjct: 129 ---VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVKQHLGSVVPVGDNYFA 185
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVSYLEGCTA
Sbjct: 186 ALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVSYLEGCTA 245
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P RDENQLHAAVVELV L++AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CRG RSK++
Sbjct: 246 PMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECRGDRSKVT 305
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T S+IVSK
Sbjct: 306 WTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRTKSKIVSK 365
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN +EHEA
Sbjct: 366 GISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEA 425
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++SLEGSVG
Sbjct: 426 TTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEVSLEGSVG 485
>gi|317474557|ref|ZP_07933831.1| FeS assembly protein SufB [Bacteroides eggerthii 1_2_48FAA]
gi|316909238|gb|EFV30918.1| FeS assembly protein SufB [Bacteroides eggerthii 1_2_48FAA]
Length = 484
Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats.
Identities = 319/486 (65%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T++ D +GLNED++R IS KK EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTDVHTDIIERGLNEDVVRLISRKKEEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV+KYL +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVQKYLGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 INSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGRSENSYRGLVRVAQKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGI E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 IVEHEATTSKISEDQIFYCNQRGISTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLAIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|329964515|ref|ZP_08301569.1| FeS assembly protein SufB [Bacteroides fluxus YIT 12057]
gi|328524915|gb|EGF51967.1| FeS assembly protein SufB [Bacteroides fluxus YIT 12057]
Length = 503
Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats.
Identities = 320/480 (66%), Positives = 393/480 (81%), Gaps = 6/480 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
VRKI ++YKYGF T++ D +GLNE+++R IS KK EP+W+LE+RL AYR WLT++
Sbjct: 29 VRKIAEEKYKYGFTTDVHTDIIERGLNEEVVRLISEKKGEPEWLLEFRLKAYRHWLTLEM 88
Query: 71 PSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ L+G
Sbjct: 89 PTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELVKTFNKLGIPLEEQMALSG-- 146
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
+AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV+KYL +VVP DNF+A
Sbjct: 147 ---MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVQKYLGSVVPYRDNFFA 203
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSYLEGCTA
Sbjct: 204 ALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSYLEGCTA 263
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG C+G+ SK+S
Sbjct: 264 PMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKGVGSKLS 323
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT S IVSK
Sbjct: 324 WTQVETGSAITWKYPSCILSGDDSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRSTIVSK 383
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N + +EHEA
Sbjct: 384 GISAGRSENSYRGLVRVAQKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETAIVEHEA 443
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TTSKIS++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ ISLEGSVG
Sbjct: 444 TTSKISEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLAISLEGSVG 503
>gi|313147914|ref|ZP_07810107.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis 3_1_12]
gi|313136681|gb|EFR54041.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
fragilis 3_1_12]
Length = 484
Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats.
Identities = 323/486 (66%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T + D KGLNED++R IS+KKNEPDW+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTEVHTDIIEKGLNEDVVRLISSKKNEPDWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKYL +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYLGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 VDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGKSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGI E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 VVEHEATTSKISEDQIFYCNQRGISTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLTIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|85710906|ref|ZP_01041967.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
gi|85695310|gb|EAQ33247.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
Length = 478
Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats.
Identities = 340/482 (70%), Positives = 404/482 (83%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y GF + I+ + PKGL+ED+IR +SA K EP+WMLEWRL AYR WL
Sbjct: 3 EQIDQALARKYDAGFVSEIESETFPKGLDEDVIRRLSAIKGEPEWMLEWRLKAYRTWLKQ 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+P WA + YP ID+ D+ YY+APKS P+SLD+VDPELLRTYEKLGIP+ EQE+LAG
Sbjct: 63 TEPEWAHVDYPKIDYQDISYYSAPKSMKDKPKSLDEVDPELLRTYEKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSVVTTF+E+L+++GVIF PISEA+ ++PDLVKKYL TVVP GDN+
Sbjct: 123 -----VAVDAVFDSVSVVTTFREKLEEAGVIFCPISEALHKYPDLVKKYLGTVVPRGDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLI+A+EGSYVSYLEGC
Sbjct: 178 FAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIVAEEGSYVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRGLC-EKNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+HL KNT S I+
Sbjct: 297 ISWTQVETGSAVTWKYPSCILKGDNSVGEFYSVALTRGKQQADTGTKMIHLGKNTKSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG+SNN YRG V + GA +RNFT+CDSLLIG+ CGAHT PYIES N S +EH
Sbjct: 357 SKGISAGYSNNAYRGLVRMGPGAEGARNFTECDSLLIGDKCGAHTFPYIESSNPSAIVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ LF C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDDQLFLCQQRGLDPEKAVSMIVNGFCKEVFRELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|325915079|ref|ZP_08177407.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
vesicatoria ATCC 35937]
gi|325538691|gb|EGD10359.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
vesicatoria ATCC 35937]
Length = 485
Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats.
Identities = 316/487 (64%), Positives = 387/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++ +Y GF T I+ D P GL+ED IR +SAKK+EP WM +WRL AY
Sbjct: 6 APPQNAEIIERLGR-RYDAGFITEIESDSLPPGLDEDTIRALSAKKDEPQWMTDWRLEAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA+++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 65 RHWLKMPMPEWAKLKIAPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++VK+YL +VVP
Sbjct: 124 ARLAG-----VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVKQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVS
Sbjct: 179 VGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV L++AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T
Sbjct: 299 GDRSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN
Sbjct: 359 KSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPG 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEV 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|21232197|ref|NP_638114.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66767674|ref|YP_242436.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. campestris str. 8004]
gi|21113953|gb|AAM42038.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573006|gb|AAY48416.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
Length = 485
Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats.
Identities = 317/480 (66%), Positives = 384/480 (80%), Gaps = 6/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ + +Y GF T I+ D P GL+EDIIR +SAKK EP WM +WRL AYR WL M
Sbjct: 12 QILERLGRRYDAGFITEIESDSLPPGLDEDIIRALSAKKEEPQWMTDWRLEAYRHWLKMP 71
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA+++ IDF L YY+APK SLDDV ELL TY+KLG+P+ E+ LAG
Sbjct: 72 MPEWAKLKIAPIDFQALSYYSAPKG-PKYASLDDVPKELLDTYDKLGVPLHERARLAG-- 128
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++VK+YL +VVPVGDN++A
Sbjct: 129 ---VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVKQYLGSVVPVGDNYFA 185
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVSYLEGCTA
Sbjct: 186 ALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVSYLEGCTA 245
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P RDENQLHAAVVELV L++AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CRG RSK++
Sbjct: 246 PMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECRGDRSKVT 305
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T S+IVSK
Sbjct: 306 WTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRTKSKIVSK 365
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN +EHEA
Sbjct: 366 GISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEA 425
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++SLEGSVG
Sbjct: 426 TTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEVSLEGSVG 485
>gi|114764571|ref|ZP_01443775.1| FeS assembly protein SufB [Pelagibaca bermudensis HTCC2601]
gi|114542947|gb|EAU45967.1| FeS assembly protein SufB [Roseovarius sp. HTCC2601]
Length = 510
Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats.
Identities = 347/499 (69%), Positives = 410/499 (82%), Gaps = 15/499 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ETVD V + YKYG+ET I+++ AP GL+EDI+R IS+K EP+WM EWRL AYR
Sbjct: 14 EKETVDAVEAV--STYKYGWETEIEMEYAPMGLDEDIVRLISSKNGEPEWMTEWRLEAYR 71
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
RWLT K+P WA + YP IDF YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 72 RWLTKKEPDWAMVEYPEIDFQKQYYYARPKSMETKPKSLDEVDPKLLATYEKLGIPLKEQ 131
Query: 123 EILAGVQT------------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+LAGV+ KVAVDAVFDSVSV TTF++EL+K+GVIF ISEAI +HP
Sbjct: 132 MVLAGVEGAEDAPADANAPERKVAVDAVFDSVSVGTTFQKELEKAGVIFCSISEAIEKHP 191
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LVKKYL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFER
Sbjct: 192 ELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFER 251
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLIIAD+GSYVSYLEGCTAP+RD QLHAAVVE++ ++AE+KYSTVQNW+PGD +GKGG
Sbjct: 252 TLIIADKGSYVSYLEGCTAPKRDTAQLHAAVVEIIVEEDAEVKYSTVQNWFPGDEEGKGG 311
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
IYNFVTKR DCRG R+KI WTQ+ETGSA+TWKYPSC+LRG +S GEFYSIAI+N QQ D
Sbjct: 312 IYNFVTKRADCRGDRAKIMWTQVETGSAVTWKYPSCILRGNESQGEFYSIAIANNHQQAD 371
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+GTKM+HL K+T SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGA
Sbjct: 372 TGTKMIHLGKDTKSRIVSKGISAGVAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGA 431
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT+PYIE KN+S EHEATTSK+ D+ LFYC QRG+ EE A+AL+VNGF +EVLQ LPM
Sbjct: 432 HTVPYIEVKNNSSRCEHEATTSKVDDDQLFYCRQRGMDEEEAVALVVNGFCKEVLQALPM 491
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFA+EAQ L+ ISLEGSVG
Sbjct: 492 EFAMEAQALVAISLEGSVG 510
>gi|310815932|ref|YP_003963896.1| FeS assembly protein SufB [Ketogulonicigenium vulgare Y25]
gi|308754667|gb|ADO42596.1| FeS assembly protein SufB [Ketogulonicigenium vulgare Y25]
Length = 501
Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats.
Identities = 342/488 (70%), Positives = 406/488 (83%), Gaps = 6/488 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
TV V+++ YK+G+ET+I+ D APKGLNEDI+R IS EP WML+WRL A+ RW
Sbjct: 15 TVAAVQQL-SGTYKHGWETDIETDYAPKGLNEDIVRLISDNNGEPQWMLDWRLQAFARWQ 73
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEIL 125
++ P+W + P IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ +L
Sbjct: 74 KLESPTWPMLTLPVIDFQDQYYYARPKSMAVKPKSLDEVDPKLLATYEKLGIPLKEQMLL 133
Query: 126 AGVQT----SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
AGV+ KVA+DAVFDSVSV TTFK+EL K+GVIF ISEAI EHP+LVKKYL TVV
Sbjct: 134 AGVEGAAEERKVAMDAVFDSVSVGTTFKDELAKAGVIFCSISEAIREHPELVKKYLGTVV 193
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIAD+GSYV
Sbjct: 194 PVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYV 253
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNWYPGD++GKGGIYNFVTKR DC
Sbjct: 254 SYLEGCTAPQRDIAQLHAAVVEIIVEEDAEVKYSTVQNWYPGDAEGKGGIYNFVTKRADC 313
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG R+K+ WTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM+HL KN
Sbjct: 314 RGDRAKVMWTQVETGSAITWKYPSCILRGDDSQGEFYSIAIANNAQQADTGTKMIHLGKN 373
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDSLLIG+ CGAHT+PYIE +N+
Sbjct: 374 TKSRIVSKGISAGRAQNTYRGLVSMHPKAQNSRNYTQCDSLLIGDQCGAHTVPYIEVRNN 433
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEATTSK+ D+ +FYC RG+ EE A+A+IVNGFV++VLQ LPMEFA+EAQ L+
Sbjct: 434 SSRVEHEATTSKVDDDQMFYCRSRGMDEEQAVAVIVNGFVKDVLQALPMEFAMEAQALVA 493
Query: 482 ISLEGSVG 489
ISLEGSVG
Sbjct: 494 ISLEGSVG 501
>gi|92113359|ref|YP_573287.1| cysteine desulfurase activator complex subunit SufB
[Chromohalobacter salexigens DSM 3043]
gi|91796449|gb|ABE58588.1| Iron-regulated ABC transporter membrane component SufB
[Chromohalobacter salexigens DSM 3043]
Length = 480
Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats.
Identities = 325/482 (67%), Positives = 390/482 (80%), Gaps = 6/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++ ++ +Y GF T+I+ D P GL+ED I FIS KK EP+WMLEWRL AY +WL M
Sbjct: 4 QEMEQLVRREYTQGFVTDIESDTVPPGLDEDTIAFISNKKGEPEWMLEWRLDAYHQWLKM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K+PSWA + YP ID+ + YY+APK PQSLD+VDP+LL TYEKLGIP+ E+ LAG
Sbjct: 64 KEPSWAHLDYPPIDYQAISYYSAPKKPEDRPQSLDEVDPKLLETYEKLGIPLHERAALAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTFKE+L ++GVIF ISEAI ++P+LV++YL +VVP GDN+
Sbjct: 124 -----VAVDAVFDSVSVTTTFKEKLAEAGVIFCSISEAIRDYPELVRQYLGSVVPKGDNY 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFVY+P+GV CPMELSTYFRIN TGQFERTLI+ D+ + VSYLEGC
Sbjct: 179 FAALNSAVFTDGSFVYVPEGVECPMELSTYFRINAANTGQFERTLIVCDKQAQVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVAL++A IKYSTVQNWYPGD GKGGIYNFVTKRGDCRG RSK
Sbjct: 239 TAPQRDENQLHAAVVELVALEDAYIKYSTVQNWYPGDEDGKGGIYNFVTKRGDCRGDRSK 298
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++NG QQ D+GTKM+H+ + T S IV
Sbjct: 299 ISWTQVETGSAITWKYPSCVLRGKDSVGEFYSVAVTNGRQQADTGTKMIHVGEGTRSTIV 358
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGI+AG S+ YRG V V A +RNFTQCDSLLIG+ CGAHT PY E NSS +EH
Sbjct: 359 SKGIAAGNSDQAYRGLVKVGPRAKGARNFTQCDSLLIGDRCGAHTFPYQEIGNSSATVEH 418
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKI ++ LFYC RGI EE A+ +IVNGF ++V Q+LPMEFAVEA+ L++++LEG+
Sbjct: 419 EATTSKIGEDQLFYCQARGISEEDAVNMIVNGFCKDVFQELPMEFAVEAEALLNVTLEGA 478
Query: 488 VG 489
VG
Sbjct: 479 VG 480
>gi|329954146|ref|ZP_08295241.1| FeS assembly protein SufB [Bacteroides clarus YIT 12056]
gi|328528123|gb|EGF55103.1| FeS assembly protein SufB [Bacteroides clarus YIT 12056]
Length = 484
Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats.
Identities = 318/486 (65%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T++ D +GLNED++R IS KK EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTDVHTDIIERGLNEDVVRLISEKKEEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV+KYL +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVQKYLGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 INSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGRSENSYRGLVRVAQKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 IVEHEATTSKISEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLAIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|313158041|gb|EFR57447.1| FeS assembly protein SufB [Alistipes sp. HGB5]
Length = 488
Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats.
Identities = 326/489 (66%), Positives = 392/489 (80%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + D + I +YKYGF ++I+ + KGL+ED++R ISAKK EP WM E R+
Sbjct: 8 MA--EKDKDILENIGEQEYKYGFTSDIETETIGKGLSEDVVRLISAKKGEPAWMTERRVA 65
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WLTM P+WA + P IDF D+ YYAAPK S+D+VDPEL RT++KLGIP+
Sbjct: 66 AYRHWLTMGPPTWAHLTIPEIDFQDIIYYAAPKQQKKLDSMDEVDPELKRTFDKLGIPLE 125
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ LAG VAVDAV DSVSV TTFKE L + G+IF ISEA+ ++PDLVKKYL +V
Sbjct: 126 EQMALAG-----VAVDAVMDSVSVKTTFKEVLAEKGIIFCSISEALRDYPDLVKKYLGSV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALN+AVF+DGSF YIPKGVRCPMELSTYFRIN GTGQFERTLI+ADEG+Y
Sbjct: 181 VPYTDNFYAALNAAVFSDGSFCYIPKGVRCPMELSTYFRINAAGTGQFERTLIVADEGAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+RDENQLHAAVVE++ +AE+KYSTVQNWYPGD +G+GGIYNFVTKRG
Sbjct: 241 VSYLEGCTAPRRDENQLHAAVVEIIVEKDAEVKYSTVQNWYPGDREGRGGIYNFVTKRGI 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CR +++SWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N FQQ D+GTKM+H+ +
Sbjct: 301 CR-ENARLSWTQVETGSAITWKYPSCILAGDNSVGEFYSVAMTNNFQQADTGTKMIHIGR 359
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT SRIVSKGISAG S N+YRG V + +GA ++RN++QCDSLLIG+ CGAHT P I+S+N
Sbjct: 360 NTRSRIVSKGISAGRSENSYRGLVRMAKGAENARNYSQCDSLLIGDKCGAHTFPVIDSRN 419
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKISD+ LFYC QRG+ E A+ LIVNG+ REVL KLPMEFAVEAQKL+
Sbjct: 420 RTAVVEHEATTSKISDDQLFYCNQRGLSTEDAVGLIVNGYAREVLAKLPMEFAVEAQKLL 479
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 480 SISLEGSVG 488
>gi|261855792|ref|YP_003263075.1| FeS assembly protein SufB [Halothiobacillus neapolitanus c2]
gi|261836261|gb|ACX96028.1| FeS assembly protein SufB [Halothiobacillus neapolitanus c2]
Length = 499
Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats.
Identities = 346/498 (69%), Positives = 401/498 (80%), Gaps = 13/498 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M +E + + +YKYGF T+I+ D P GLNED+IR ISAKKNEP+++LEWRL
Sbjct: 6 MTEQQE----IESLMQREYKYGFTTDIEQDIIPPGLNEDVIRLISAKKNEPEFLLEWRLK 61
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV--------GPQSLDDVDPELLRTY 112
AYR WLTM P+WA + YP ID+ L YYAAPKS PQSLDDVDP+LL TY
Sbjct: 62 AYRHWLTMTPPTWAHVHYPPIDYQALSYYAAPKSAAELAEIEASKPQSLDDVDPKLLETY 121
Query: 113 EKLGIPIREQEILAGV-QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
EKLGIP+ E+ ILAGV Q S VAVDAVFDSVSV TTFK +L ++GVIF SEA+ HPD
Sbjct: 122 EKLGIPLHERAILAGVAQPSNVAVDAVFDSVSVTTTFKAKLAEAGVIFCSFSEAVHNHPD 181
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L+KKYL TVVP GDN+YAALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN K TGQFERT
Sbjct: 182 LIKKYLGTVVPAGDNYYAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAKNTGQFERT 241
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+A+EG++VSYLEGCTAPQRDENQLHAAVVELVALD+A IKYSTVQNWYPGD QGKGGI
Sbjct: 242 LIVAEEGAHVSYLEGCTAPQRDENQLHAAVVELVALDDATIKYSTVQNWYPGDEQGKGGI 301
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YNFVTKRGD RG RSKI+WTQ+E GSAITWKYPSC+LRG+ S GEFYS+A+SN +QQ+DS
Sbjct: 302 YNFVTKRGDARGNRSKITWTQVEAGSAITWKYPSCILRGDDSVGEFYSVAVSNNYQQVDS 361
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+HL K T S IVSK ISAG S N YRG V + + A +RN+TQCD+LLIG+ GAH
Sbjct: 362 GTKMIHLGKRTRSTIVSKSISAGRSQNAYRGLVHIAKSADDARNYTQCDALLIGDRNGAH 421
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T PYIE+KN++ +EHEATTSKISD+ +FY RGI EE A +IVNGF +EV +LPME
Sbjct: 422 TFPYIEAKNATAQIEHEATTSKISDDQIFYLQSRGISEENATNMIVNGFCKEVFNELPME 481
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQ L+ +SLEGSVG
Sbjct: 482 FAVEAQALLAVSLEGSVG 499
>gi|167764126|ref|ZP_02436253.1| hypothetical protein BACSTE_02509 [Bacteroides stercoris ATCC
43183]
gi|167698242|gb|EDS14821.1| hypothetical protein BACSTE_02509 [Bacteroides stercoris ATCC
43183]
Length = 484
Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats.
Identities = 318/486 (65%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T++ D +GLNED++R IS KK EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTDVHTDIIERGLNEDVVRLISEKKGEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPAWAHLRIPEIDYQAISYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV+KYL +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVQKYLGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 VNSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGRSENSYRGLVRVAQKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 IVEHEATTSKISEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLAIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|332709643|ref|ZP_08429602.1| Iron-regulated ABC transporter membrane component SufB [Lyngbya
majuscula 3L]
gi|332351470|gb|EGJ31051.1| Iron-regulated ABC transporter membrane component SufB [Lyngbya
majuscula 3L]
Length = 479
Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats.
Identities = 310/481 (64%), Positives = 384/481 (79%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V+ + YKYGF T+I+ D P+GLNEDIIR ISAKKNEP++MLE+RL AYR+W M
Sbjct: 4 TVKTLVNQPYKYGFVTDIEADTIPRGLNEDIIRLISAKKNEPEFMLEFRLKAYRQWQKMT 63
Query: 70 DPSWARIRYPAIDFDDLYYYAAPK-SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+P+W + YP ID+ + YY+APK + SLD+VDP LL T++KLGI + EQ+ LA
Sbjct: 64 EPTWPHVTYPPIDYQKIIYYSAPKQTKEKLNSLDEVDPALLETFDKLGISLSEQKRLA-- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDA+FDSVS+ TTFKE+L +SGVIF ISEA+ EHP+LV+KYL +VVPV DN++
Sbjct: 122 ---NVAVDAIFDSVSIATTFKEKLAESGVIFCSISEALQEHPELVRKYLGSVVPVADNYF 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLI+A+EGS VSYLEGCT
Sbjct: 179 AALNSAVFSDGSFVYIPKGVKCPMELSTYFRINNGDTGQFERTLIVAEEGSNVSYLEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D NQLHAAVVELVALDNAEIKYSTVQNW+ GD GKGGIYNFVTKRG C+G+ SKI
Sbjct: 239 APMYDSNQLHAAVVELVALDNAEIKYSTVQNWFAGDKNGKGGIYNFVTKRGLCKGVNSKI 298
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+S
Sbjct: 299 SWTQVETGSAITWKYPSCVLVGDNSIGEFYSVALTNNLQQADTGTKMVHIGKNTRSTIIS 358
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG V + A +RN++QCDS+LIG+ A+T PYI+ +N+ +EHE
Sbjct: 359 KGISAGKSKNSYRGLVKIGPKAKGARNYSQCDSMLIGDTAEANTFPYIQVQNNMGKVEHE 418
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI ++ LF+ QRGI EE AI+++V+GF ++V +LPMEFA EA KL+ + LEG+V
Sbjct: 419 ASTSKIGEDQLFFFAQRGISEEDAISMMVSGFCKDVFNELPMEFAAEADKLLSLKLEGTV 478
Query: 489 G 489
G
Sbjct: 479 G 479
>gi|218131827|ref|ZP_03460631.1| hypothetical protein BACEGG_03448 [Bacteroides eggerthii DSM 20697]
gi|217986130|gb|EEC52469.1| hypothetical protein BACEGG_03448 [Bacteroides eggerthii DSM 20697]
Length = 484
Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats.
Identities = 318/486 (65%), Positives = 392/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T++ D +GLNED++R IS KK EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTDVHTDIIERGLNEDVVRLISRKKEEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKDGPKSMDEVDPELVKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EH DLV+KYL +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHSDLVQKYLGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 INSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGRSENSYRGLVRVAQRADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGI E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 IVEHEATTSKISEDQIFYCNQRGISTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLAIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|284050865|ref|ZP_06381075.1| cysteine desulfurase activator complex subunit SufB [Arthrospira
platensis str. Paraca]
gi|291567132|dbj|BAI89404.1| FeS assembly protein SufB [Arthrospira platensis NIES-39]
Length = 478
Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats.
Identities = 299/479 (62%), Positives = 382/479 (79%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + YKYGF T+I+ D PKGL+ED++R IS+KKNEP++ML +RL AY++W M +
Sbjct: 5 VKTLVNQPYKYGFVTDIESDTIPKGLSEDVVRLISSKKNEPEFMLNFRLRAYQQWQKMAE 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+W + YP ID+ ++ YY+APK SL++VDP L+ T+EKLGIP+ EQ+ LA
Sbjct: 65 PTWPHVHYPPIDYQNIIYYSAPKVEKKKGSLEEVDPTLIETFEKLGIPLSEQKRLA---- 120
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVS+ TTFKE+L + GVIF ISEA+ HP+L++KYL +VVPVGDN++AA
Sbjct: 121 -NVAVDAVFDSVSIATTFKEKLAEEGVIFCSISEAVESHPELIEKYLGSVVPVGDNYFAA 179
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV+CPM+LSTYFRIN +GQFERTLI+A+ GS V+YLEGCTAP
Sbjct: 180 LNSAVFSDGSFVYIPKGVKCPMDLSTYFRINNGESGQFERTLIVAESGSSVTYLEGCTAP 239
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVELVALDNA I+YSTVQNW+ GD GKGGIYNFVTKRG C+G+ SKISW
Sbjct: 240 MFDTNQLHAAVVELVALDNATIEYSTVQNWFAGDEDGKGGIYNFVTKRGLCKGVNSKISW 299
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SKG
Sbjct: 300 TQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNCQQADTGTKMVHIGKNTRSTIISKG 359
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A +RN++QCDS+LIG+ A+T PYI+ +N++ +EHEA+
Sbjct: 360 ISAGRSANSYRGLVKMGPKAIGARNYSQCDSMLIGDCGQANTFPYIQVENNTAKVEHEAS 419
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFY QRGI EE A+++I++GF ++V KLPMEFA EA KL+ + LEG+VG
Sbjct: 420 TSKIGEDQLFYFTQRGIAEEDAVSMIISGFCKDVFNKLPMEFAAEADKLLSLKLEGAVG 478
>gi|150003924|ref|YP_001298668.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
vulgatus ATCC 8482]
gi|212692750|ref|ZP_03300878.1| hypothetical protein BACDOR_02248 [Bacteroides dorei DSM 17855]
gi|237709446|ref|ZP_04539927.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 9_1_42FAA]
gi|237724954|ref|ZP_04555435.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D4]
gi|254880835|ref|ZP_05253545.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 4_3_47FAA]
gi|265754645|ref|ZP_06089697.1| FeS assembly protein SufB [Bacteroides sp. 3_1_33FAA]
gi|294775080|ref|ZP_06740609.1| FeS assembly protein SufB [Bacteroides vulgatus PC510]
gi|319639845|ref|ZP_07994574.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
gi|149932348|gb|ABR39046.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|212664686|gb|EEB25258.1| hypothetical protein BACDOR_02248 [Bacteroides dorei DSM 17855]
gi|229436692|gb|EEO46769.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
dorei 5_1_36/D4]
gi|229456502|gb|EEO62223.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 9_1_42FAA]
gi|254833628|gb|EET13937.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 4_3_47FAA]
gi|263234759|gb|EEZ20327.1| FeS assembly protein SufB [Bacteroides sp. 3_1_33FAA]
gi|294451124|gb|EFG19595.1| FeS assembly protein SufB [Bacteroides vulgatus PC510]
gi|317388509|gb|EFV69359.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
Length = 483
Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats.
Identities = 324/486 (66%), Positives = 393/486 (80%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T + D +GLNED+IR ISAKKNEP+W+LE+RL AYR
Sbjct: 3 EEPNKYVKELTQEKYKYGFTTEVHTDIIERGLNEDVIRLISAKKNEPEWLLEFRLKAYRY 62
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLTM+ P+WA + P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 63 WLTMEMPAWAHLTIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQM 122
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKYL +VV
Sbjct: 123 ALSG-----MAVDAVMDSVSVKTTFKETLLEKGIIFCSFSEAVREHPDLVKKYLGSVVGP 177
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ SYVSY
Sbjct: 178 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDSYVSY 237
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG C+G
Sbjct: 238 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGHCKG 297
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL +NT
Sbjct: 298 VDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGRNTR 357
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V + A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 358 STIVSKGISAGKSQNSYRGLVRVAQKADNARNYSQCDSLLLGSQCGAHTFPYMDIHNETA 417
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ LFYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 418 VVEHEATTSKISEDQLFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLAIS 477
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 478 LEGSVG 483
>gi|325281866|ref|YP_004254408.1| FeS assembly protein SufB [Odoribacter splanchnicus DSM 20712]
gi|324313675|gb|ADY34228.1| FeS assembly protein SufB [Odoribacter splanchnicus DSM 20712]
Length = 477
Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats.
Identities = 314/481 (65%), Positives = 387/481 (80%), Gaps = 6/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + ++ +YKYGF TN++ D KGLNE++IR ISAKK EPDWMLE+RL AYR WLTM
Sbjct: 3 NIIEEVTGSEYKYGFVTNVETDTIGKGLNEEVIRIISAKKEEPDWMLEFRLKAYRHWLTM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K P WA++ P I++ D+ YYAAPK +S ++VDPEL T++KLGIP+ EQ L+G
Sbjct: 63 KMPRWAQLDIPEINYQDIVYYAAPKQKET-KSWEEVDPELKATFDKLGIPLSEQMALSG- 120
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAV DSVSV TTFK+ L + GVIF SEA+ HPDLV+KYL TVVP DN++
Sbjct: 121 ----VAVDAVMDSVSVKTTFKDTLAERGVIFCSFSEAVKNHPDLVRKYLGTVVPYHDNYF 176
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+A++ +YVSYLEGCT
Sbjct: 177 AALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVAEDEAYVSYLEGCT 236
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAA+VE+V NAE+KYSTVQNWYPGD GKGGIYNFVTKRG CRG +++
Sbjct: 237 APQRDENQLHAAIVEIVVEKNAEVKYSTVQNWYPGDKDGKGGIYNFVTKRGICRGENARL 296
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W Q+ETGSAITWKYPS +L+G+ S EFYS+A++N +QQ D+GTKM+H+ NT SRIVS
Sbjct: 297 IWAQVETGSAITWKYPSTILKGDGSVSEFYSVAVTNNYQQADTGTKMIHIGNNTRSRIVS 356
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAGFS+N+YRGKV V + ++RN++QCDSLL+G+ CGAHT PY+E +NS+ +EHE
Sbjct: 357 KGISAGFSSNSYRGKVKVVKSCQNARNYSQCDSLLLGDKCGAHTFPYLEIENSTAQVEHE 416
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKI ++ +FYC QRGI E A+ LI+ G+ +VL K+PMEFAVEAQKL+ ISLEGSV
Sbjct: 417 ATTSKIGEDQIFYCNQRGISTEDAVGLIIKGYAGDVLNKMPMEFAVEAQKLLQISLEGSV 476
Query: 489 G 489
G
Sbjct: 477 G 477
>gi|121997340|ref|YP_001002127.1| cysteine desulfurase activator complex subunit SufB [Halorhodospira
halophila SL1]
gi|121588745|gb|ABM61325.1| Iron-regulated ABC transporter membrane component SufB
[Halorhodospira halophila SL1]
Length = 491
Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats.
Identities = 325/496 (65%), Positives = 396/496 (79%), Gaps = 12/496 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + ET+++ Y+ GF T+I+ + AP GLNE+ IRFIS KK EP+WML+WRL
Sbjct: 1 MASSNETIER---FTSRGYEAGFFTDIEQEFAPPGLNEETIRFISEKKGEPEWMLQWRLE 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WL M P W +++P IDF + YYAAPK GP+SLD+VDP+LL TYEKLGIP+
Sbjct: 58 AYRGWLEMAVPEWQNVQFPPIDFQAISYYAAPKE--GPKSLDEVDPKLLETYEKLGIPLH 115
Query: 121 EQEILAGVQ-------TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
EQ++LAGVQ VAVDAVFDSVSV TTFKEEL K GVIF ISEA+ E+P+LV
Sbjct: 116 EQKMLAGVQEAEEGTERPNVAVDAVFDSVSVATTFKEELAKHGVIFCSISEALHEYPELV 175
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++Y+ +VVP DNF+AALNSAVF+DGSFVYIP+GV CPMELSTYFRIN TGQFERTLI
Sbjct: 176 RQYIGSVVPRKDNFFAALNSAVFSDGSFVYIPEGVECPMELSTYFRINAGHTGQFERTLI 235
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA++GS VSYLEGCTAPQRDENQLHAAVVEL A D+A+IKYSTVQNWYPGD+ G GG+YN
Sbjct: 236 IAEKGSSVSYLEGCTAPQRDENQLHAAVVELYAHDDAQIKYSTVQNWYPGDANGVGGVYN 295
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG C G RSKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++ G QQ D+GT
Sbjct: 296 FVTKRGLCAGKRSKISWTQVETGSAITWKYPSCVLKGDDSIGEFYSVAVTRGRQQADTGT 355
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ NT S I+SKGISA + +YRG V V A ++RN++QCDS+L+ ++CGAHT
Sbjct: 356 KMIHIGNNTRSHIISKGISADYGQQSYRGLVKVLPTAGNARNYSQCDSMLMSSHCGAHTF 415
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYI+ +N + LEHEATTSKI D+ +FYC QRGI EE A+++IVNGF +EV QKLPMEFA
Sbjct: 416 PYIDIQNPTAQLEHEATTSKIGDDQIFYCKQRGISEEDAVSMIVNGFCKEVFQKLPMEFA 475
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL++++LE SVG
Sbjct: 476 VEAQKLLEVTLEDSVG 491
>gi|188994221|ref|YP_001928473.1| cysteine desulfurase activator complex subunit SufB [Porphyromonas
gingivalis ATCC 33277]
gi|188593901|dbj|BAG32876.1| ABC transporter membrane protein [Porphyromonas gingivalis ATCC
33277]
Length = 481
Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats.
Identities = 327/486 (67%), Positives = 399/486 (82%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++E + + ++ +YKYGF T+I+ + +GL+ED +R ISAKK EP+W+LE+RL AYR
Sbjct: 1 MQENNNILDEVTGSEYKYGFVTDIETETIGRGLSEDTVRLISAKKEEPEWLLEFRLNAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WL+MK+P WA + P ID+ D+ YYAAPK GP+SLD+VDPELL+T++KLGIP+ EQ+
Sbjct: 61 HWLSMKEPDWAHLNIPPIDYQDIIYYAAPKKKKGPKSLDEVDPELLKTFDKLGIPLEEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
IL+G +AVDAV DSVSV TTFKE+L + G+IF SEA+ + PDLVKKYL TVV
Sbjct: 121 ILSG-----MAVDAVMDSVSVKTTFKEKLAEKGIIFCSFSEAVKDFPDLVKKYLGTVVSS 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADE SYVSY
Sbjct: 176 KDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADEDSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQRDENQLHAA+VE++A NAE+KYSTVQNWYPGD +GKGGIYNFVTKRG C+G
Sbjct: 236 LEGCTAPQRDENQLHAAIVEIIAETNAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGVCKG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 DNSKISWTQVETGSAITWKYPSCVLRGDNSIAEFYSVAVTNNFQQADTGTKMIHLGKNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S N+YRG V + + A ++RN +QCDSLL+ ++CGAHT PY + +N +
Sbjct: 356 SRIVSKGISAGSSQNSYRGLVKISKNAVNARNHSQCDSLLLSDHCGAHTYPYADVQNDTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS+E +FYC QRGI E A+ LIVNG+ +EV+ KLPMEFAVEAQKL+ IS
Sbjct: 416 IIEHEATTSKISEEQIFYCNQRGIGTEEAVGLIVNGYAKEVMNKLPMEFAVEAQKLLSIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|289664562|ref|ZP_06486143.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289671187|ref|ZP_06492262.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 485
Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats.
Identities = 317/487 (65%), Positives = 388/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++ +Y GF T I+ D P GL+EDIIR +SAKK+EP WM +WRL AY
Sbjct: 6 APPQNAEILERLGR-RYDAGFITEIESDSLPPGLDEDIIRALSAKKDEPQWMTDWRLEAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA+++ I+F L YY+APK SLDDV ELL TY+KLG+P+ E+
Sbjct: 65 RHWLKMPMPEWAKLQISPINFQALSYYSAPKG-PKYASLDDVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++VK+YL +VVP
Sbjct: 124 AKLAG-----VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVKQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVS
Sbjct: 179 VGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDQAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV L++AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T
Sbjct: 299 GARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN
Sbjct: 359 KSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPG 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEV 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|294341075|emb|CAZ89472.1| Protein sufB [Thiomonas sp. 3As]
Length = 481
Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats.
Identities = 331/486 (68%), Positives = 399/486 (82%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ + + Y GF + I D APKGL EDIIR ISAKKNEP+++L+WRL AYR
Sbjct: 1 MSQSNPSLVEFLERDYAAGFISPIDSDLAPKGLGEDIIRLISAKKNEPEFLLQWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT+ +P+WA+I +P ID+ ++YYAAPK P+SLD+VDPELLR YEKLGIP+ E+
Sbjct: 61 HWLTLAEPTWAKIHHPPIDYQAIHYYAAPKRDKAPKSLDEVDPELLRVYEKLGIPLHERA 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG VAVDAVFDSVSV TTFK++L + G+IF S+A+ HP+LV++YL TVVP
Sbjct: 121 ALAG-----VAVDAVFDSVSVATTFKDKLAQHGIIFCSFSDAVQNHPELVQQYLGTVVPP 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDNF+AALN+AVFTDGSFVYIPKGVRCPMELSTYFRIN K +GQFERTLIIADEG+ VSY
Sbjct: 176 GDNFFAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINAKDSGQFERTLIIADEGAQVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP+RDENQLHAAVVE++ALD+A +KYSTVQNWYPGD GKGGIYNFVTKRG+CRG
Sbjct: 236 LEGCTAPRRDENQLHAAVVEIIALDDARVKYSTVQNWYPGDKDGKGGIYNFVTKRGECRG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
RS+ISWTQ+ETGSAITWKYPS LLRG+ S GEFYS+A++N FQQ D+GTKM+H+ +NT
Sbjct: 296 ARSRISWTQVETGSAITWKYPSVLLRGDDSVGEFYSVALTNHFQQADTGTKMIHIGRNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG +NTYRG V V A +RN+TQCDSLLIG+ CGAHT PYIE +N S
Sbjct: 356 STIVSKGISAGRGSNTYRGLVKVLPKAEGARNYTQCDSLLIGDRCGAHTFPYIEVRNPSA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTS++ ++ LFYC+QRGI E A+ALIV GF REV+++LPMEFAVEAQKL+ +S
Sbjct: 416 QVEHEATTSRVGEDQLFYCMQRGISAEDAVALIVGGFAREVVKQLPMEFAVEAQKLLGVS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|229496653|ref|ZP_04390367.1| FeS assembly protein SufB [Porphyromonas endodontalis ATCC 35406]
gi|229316550|gb|EEN82469.1| FeS assembly protein SufB [Porphyromonas endodontalis ATCC 35406]
Length = 494
Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats.
Identities = 309/481 (64%), Positives = 383/481 (79%), Gaps = 4/481 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D ++++ YKYGFET I + +GL+E+++R IS KK EP+W+L++RL AY+ WLT+
Sbjct: 18 DILQEVTQGDYKYGFETKISTETIERGLSEEVVRLISKKKEEPEWLLDFRLKAYQHWLTL 77
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K P WA + P ID+ D+ YYAAPK V + ++DPEL+ T++KLGIP+ E++ILAG
Sbjct: 78 KQPKWAHLHIPPIDYQDIIYYAAPKQKVSNGTPGEIDPELMETFDKLGIPLHERQILAG- 136
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
AVDAV DSVSV TTF+++L G++F SEA+ EHP+LVKKYL VV DN++
Sbjct: 137 ---NTAVDAVMDSVSVKTTFRDKLSALGIVFCSFSEAVKEHPELVKKYLGKVVNYRDNYF 193
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSF YIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ +YVSYLEGCT
Sbjct: 194 AALNSAVFSDGSFAYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDAYVSYLEGCT 253
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDENQLHAA+VE++A +NAE+KYSTVQNWYPGD GKGGIYNFVTKRG CRG SKI
Sbjct: 254 APMRDENQLHAAIVEIIAEENAEVKYSTVQNWYPGDKNGKGGIYNFVTKRGLCRGNNSKI 313
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSCLL G+ S GEFYS+A++N +QQ D+GTKM+H+ KNT S IVS
Sbjct: 314 SWTQVETGSAITWKYPSCLLVGDNSVGEFYSVAVTNNYQQADTGTKMIHIGKNTRSTIVS 373
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S+N+YRG V + A SRN +QCDSLL+ ++CGAHT PY E N + +EHE
Sbjct: 374 KGISAGSSHNSYRGLVKISASAEGSRNHSQCDSLLLSDHCGAHTFPYAEVLNDTAIIEHE 433
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKI+++ LFYC QRGI E A+ LIVNG+ REV+ KLPMEFAVEAQKL+ ++LEGSV
Sbjct: 434 ATTSKINEDQLFYCQQRGITTEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLSVTLEGSV 493
Query: 489 G 489
G
Sbjct: 494 G 494
>gi|326794499|ref|YP_004312319.1| FeS assembly protein SufB [Marinomonas mediterranea MMB-1]
gi|326545263|gb|ADZ90483.1| FeS assembly protein SufB [Marinomonas mediterranea MMB-1]
Length = 478
Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats.
Identities = 331/482 (68%), Positives = 402/482 (83%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ K +Y+ GF + I+ D GLNED+IR +S K EP+WML+WRL A+R W M
Sbjct: 3 EQIDKALAREYEAGFVSEIESDTFEPGLNEDVIRRLSQIKGEPEWMLDWRLKAFRVWQEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP IDF + YY+APKS+ P+SLD+VDPELLRTYEKLGIP+ EQ++LAG
Sbjct: 63 EEPDWAHVDYPKIDFQAIAYYSAPKSMQDKPKSLDEVDPELLRTYEKLGIPLVEQQMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+AVDAVFDSVSVVTTF+E+L+++GVIF PISEA+ ++P+LV+KYL +VVP DN+
Sbjct: 123 -----IAVDAVFDSVSVVTTFREKLEEAGVIFCPISEALHKYPELVQKYLGSVVPTKDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALN AVFTDGSFVYIPKG RCPMELSTYFRINE+ TGQFERTLI+ADEGSYVSYLEGC
Sbjct: 178 YAALNCAVFTDGSFVYIPKGTRCPMELSTYFRINEQNTGQFERTLIVADEGSYVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVA+D+AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDEDGKGGIYNFVTKRGICH-TNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+HL KNT S I+
Sbjct: 297 ISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGRQQADTGTKMIHLGKNTKSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN+YRG V ++ GA +RNFTQCDSLLIG+ CGAHT PY+ES+N S +EH
Sbjct: 357 SKGISAGKSNNSYRGLVRMNPGAKGARNFTQCDSLLIGDQCGAHTFPYVESRNPSAIIEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SDE +F C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDEQMFLCQQRGLDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|198277420|ref|ZP_03209951.1| hypothetical protein BACPLE_03634 [Bacteroides plebeius DSM 17135]
gi|198269918|gb|EDY94188.1| hypothetical protein BACPLE_03634 [Bacteroides plebeius DSM 17135]
Length = 483
Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats.
Identities = 320/485 (65%), Positives = 394/485 (81%), Gaps = 6/485 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
E V+++ +YKYGF T++ D KGLNED++R IS+KK EPDW+LE+RL A+R W
Sbjct: 4 EPNKYVKELTQAKYKYGFTTDVHTDIIEKGLNEDVVRLISSKKGEPDWLLEFRLKAFRYW 63
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
T++ P+WA + P ID+ + YYA P K GP+SLD+VDPELL+T++KLGIP+ E+
Sbjct: 64 QTLEMPTWAHLNIPEIDYQAISYYADPTKKKEGPKSLDEVDPELLKTFDKLGIPLEERMA 123
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
L+G +AVDAV DSVSV TTFKE L + G+IF ISEA+ EHPDLVKKYL +VV
Sbjct: 124 LSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSISEAVREHPDLVKKYLGSVVGYR 178
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ SYVSYL
Sbjct: 179 DNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDSYVSYL 238
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP RDENQLHAA+VE+V LD AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C+G+
Sbjct: 239 EGCTAPMRDENQLHAAIVEIVVLDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKGV 298
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT S
Sbjct: 299 DSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTRS 358
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G++CGAHT PY++ N +
Sbjct: 359 TIVSKGISAGKSQNSYRGLVRVAEKADNARNYSQCDSLLLGSHCGAHTFPYMDIHNETAV 418
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+EHEATTSKIS++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ +SL
Sbjct: 419 VEHEATTSKISEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLSVSL 478
Query: 485 EGSVG 489
EGSVG
Sbjct: 479 EGSVG 483
>gi|333029425|ref|ZP_08457486.1| FeS assembly protein SufB [Bacteroides coprosuis DSM 18011]
gi|332740022|gb|EGJ70504.1| FeS assembly protein SufB [Bacteroides coprosuis DSM 18011]
Length = 482
Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats.
Identities = 313/487 (64%), Positives = 392/487 (80%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ E V+++ ++YKYGF T++ + KGLNED++R IS KK EPDW+L++RL AYR
Sbjct: 1 MEEANKYVKELTKEKYKYGFTTDVHTEIIEKGLNEDVVRLISEKKGEPDWLLDFRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
WLT++ P WA +R P ID+ + YYA P K GP+SLD+VDPE+L+T+ KLGIP+ EQ
Sbjct: 61 HWLTLEMPKWAHLRIPEIDYQAISYYADPTKKKEGPKSLDEVDPEVLKTFNKLGIPLEEQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
L+G+ AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV++Y+ +VV
Sbjct: 121 MALSGI-----AVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVRQYMGSVVG 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ +YVS
Sbjct: 176 YRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAMNTGQFERTLIVADDDAYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD+QGKGG+YNFVTKRG C+
Sbjct: 236 YLEGCTAPMRDENQLHAAIVEIIVNDRAEVKYSTVQNWYPGDAQGKGGVYNFVTKRGHCK 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 296 GINSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I+SKGISAG S N+YRG V V A ++RN+++CDSLL+G+ CGAHT PY++ N +
Sbjct: 356 SSTIISKGISAGHSENSYRGLVRVAEKAENARNYSECDSLLLGDKCGAHTFPYMDIHNET 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKI+++ +FYC QRGI E AI LIVNG+ +EV+ KLPMEFAVEAQKL+ I
Sbjct: 416 AVIEHEATTSKINEDQIFYCNQRGISTEDAIGLIVNGYAKEVINKLPMEFAVEAQKLLSI 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|166711248|ref|ZP_02242455.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 485
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 317/487 (65%), Positives = 388/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++ +Y GF T I+ D P GL+ED+IR +SAKK+EP WM +WRL AY
Sbjct: 6 APPQNAEILERLGR-RYDAGFITEIESDSLPPGLDEDVIRALSAKKDEPQWMTDWRLEAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA+++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 65 RHWLKMPMPEWAKLQISPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++VK+YL +VVP
Sbjct: 124 AKLAG-----VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVKQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVS
Sbjct: 179 VGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPMRDENQLHAAVVELVTLDDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T
Sbjct: 299 GARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN
Sbjct: 359 KSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPG 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++
Sbjct: 419 ATVEHEATTSKISDDQLFYCCARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEV 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|84622945|ref|YP_450317.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|84366885|dbj|BAE68043.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 485
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 315/487 (64%), Positives = 388/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++ +Y GF T I+ D P GL+ED+IR +SAKK+EP WM +WRL AY
Sbjct: 6 APPQNAEILERLGR-RYDAGFITEIESDSLPPGLDEDVIRALSAKKDEPQWMTDWRLEAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA+++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 65 RHWLKMPMPEWAKLQISPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++VK+YL +VVP
Sbjct: 124 AKLAG-----VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVKQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVS
Sbjct: 179 VGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD +G+GGI+NFVTKR +CR
Sbjct: 239 YLEGCTAPMRDENQLHAAVVELVTLDDAEIKYSTVQNWYPGDEEGRGGIHNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K +
Sbjct: 299 GARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRS 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN
Sbjct: 359 KSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPG 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEV 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|58581028|ref|YP_200044.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|188577996|ref|YP_001914925.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|58425622|gb|AAW74659.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
gi|188522448|gb|ACD60393.1| FeS assembly protein SufB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 485
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 316/487 (64%), Positives = 387/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++ +Y GF T I+ D P GL+ED+IR +SAKK+EP WM +WRL AY
Sbjct: 6 APPQNAEILERLGR-RYDAGFITEIESDSLPPGLDEDVIRALSAKKDEPQWMTDWRLEAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA+++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 65 RHWLKMPMPEWAKLQISPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTF+ EL + GVIF +SEAI EHP++VK+YL +VVP
Sbjct: 124 AKLAG-----VAVDAVFDSVSVGTTFRNELAEKGVIFCSMSEAIKEHPEIVKQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVS
Sbjct: 179 VGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV LD+AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPMRDENQLHAAVVELVTLDDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K +
Sbjct: 299 GARSKVTWTQVETGSAITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRS 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE KN
Sbjct: 359 KSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPG 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEV 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|21243662|ref|NP_643244.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
axonopodis pv. citri str. 306]
gi|21109240|gb|AAM37780.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
Length = 485
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 314/480 (65%), Positives = 386/480 (80%), Gaps = 6/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ + +Y GF T I+ D P GL+ED+IR +SAKK+EP WM +WRL AYR WL M
Sbjct: 12 QILERLGRRYDAGFITEIESDSLPPGLDEDVIRALSAKKDEPQWMTDWRLEAYRHWLKMP 71
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA+++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+ LAG
Sbjct: 72 MPEWAKLQISPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHERAKLAG-- 128
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++V++YL +VVPVGDN++A
Sbjct: 129 ---VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVRQYLGSVVPVGDNYFA 185
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVSYLEGCTA
Sbjct: 186 ALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVSYLEGCTA 245
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P RDENQLHAAVVELV L++AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CRG RSK++
Sbjct: 246 PMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECRGARSKVT 305
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T S+IVSK
Sbjct: 306 WTQVETGSAITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRTKSKIVSK 365
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG NTYRG+V V R A +RN+TQCDSLLIG CGAHT PYIE KN +EHEA
Sbjct: 366 GISAGRGQNTYRGQVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEA 425
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++SLEGSVG
Sbjct: 426 TTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEVSLEGSVG 485
>gi|145349243|ref|XP_001419047.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
gi|144579278|gb|ABO97340.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
Length = 471
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 301/474 (63%), Positives = 376/474 (79%), Gaps = 5/474 (1%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
YK+GF T++ + P GLNE+++R ISAKK EP+WML++RL A+R+WLTM++P W+
Sbjct: 3 NKPYKWGFSTDVDTETIPAGLNEEVVRMISAKKEEPEWMLDFRLKAFRKWLTMEEPDWSD 62
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
RYP ID+ YY+APKS+ +SLD+VDPELL T++KLGIP+ EQ+ L + VAV
Sbjct: 63 NRYPQIDYQASSYYSAPKSMEKKKSLDEVDPELLATFDKLGIPLNEQKRL-----TNVAV 117
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVS+ TTFKE+L K+GVIF ISEA+ E+P+LVK+YL +VVPV DN++ ALNSAV
Sbjct: 118 DAVFDSVSIGTTFKEDLLKAGVIFCSISEAVHEYPELVKQYLGSVVPVADNYFTALNSAV 177
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVYIPKGV PMELSTYFRIN + +GQFERTLI+A++ SYVSYLEGCTAP DEN
Sbjct: 178 FSDGSFVYIPKGVVSPMELSTYFRINAESSGQFERTLIVAEDDSYVSYLEGCTAPAYDEN 237
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVE+ A NAE+KYSTVQNWY GD GKGGIYNFVTKRG C+G SKISWTQ+ET
Sbjct: 238 QLHAAVVEISAGKNAEVKYSTVQNWYAGDEDGKGGIYNFVTKRGLCKGDNSKISWTQVET 297
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS+ITWKYPS +L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT SRIVSKGISAG
Sbjct: 298 GSSITWKYPSVVLAGDNSIGEFYSVALTNNAQQADTGTKMIHIGKNTRSRIVSKGISAGK 357
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S N YRG V V A+ +RN++QCDS+LIG+ GA+T PYI+ K S +EHEA+TSKI
Sbjct: 358 SKNVYRGLVQVGPNASGARNYSQCDSMLIGDKAGANTYPYIQVKEPSSRVEHEASTSKIG 417
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFY QRGI E A+ +I++GF REV +LP+EFA E +L+ + LEGSVG
Sbjct: 418 EDQLFYFQQRGISPEEAVGVIISGFCREVFNELPLEFAAEVNQLMSLKLEGSVG 471
>gi|167753459|ref|ZP_02425586.1| hypothetical protein ALIPUT_01733 [Alistipes putredinis DSM 17216]
gi|167658084|gb|EDS02214.1| hypothetical protein ALIPUT_01733 [Alistipes putredinis DSM 17216]
Length = 481
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 324/489 (66%), Positives = 391/489 (79%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + + I+ +YKYGF ++I+ + P+GLNE+++R IS KK EP+WM E RL
Sbjct: 1 MA--EKDKELIENIEKQEYKYGFTSDIETETIPRGLNEEVVRLISTKKGEPEWMTERRLK 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WL M PSWA + P IDF D+ YYAAPK S+D+VDPEL RT++KLGIP+
Sbjct: 59 AYRHWLNMVSPSWAHLTIPPIDFQDVIYYAAPKPSKKLASMDEVDPELKRTFDKLGIPLE 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ LAG VAVDAV DSVSV TTFKE L + G+IF +SEAI ++P+L++KYL +V
Sbjct: 119 EQMALAG-----VAVDAVMDSVSVKTTFKETLAEKGIIFCSMSEAIRDYPELIQKYLGSV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALN+AVF+DGSF YIPKGVRCPMELSTYFRIN GTGQFERTLI+ADEG+Y
Sbjct: 174 VPYTDNFYAALNAAVFSDGSFCYIPKGVRCPMELSTYFRINAAGTGQFERTLIVADEGAY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+RDENQLHAAVVE+V +AE+KYSTVQNWYPGD +GKGG+YNFVTKRG
Sbjct: 234 VSYLEGCTAPRRDENQLHAAVVEIVVEKDAEVKYSTVQNWYPGDKEGKGGVYNFVTKRGI 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CR +++SWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N FQQ D+GTKM+H+ +
Sbjct: 294 CR-ENARLSWTQVETGSAITWKYPSCILAGDNSVGEFYSVAMTNHFQQADTGTKMIHVGR 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT SRIVSKGISAG S N+YRG V V + A ++RN++QCDSLLIG+ CGAHT P IES N
Sbjct: 353 NTRSRIVSKGISAGRSENSYRGLVRVAKAAENARNYSQCDSLLIGDKCGAHTFPVIESGN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKIS+E LFYC QRG+ E A+ LIVNG+ REVL KLPMEFAVEAQKL+
Sbjct: 413 PTAVVEHEATTSKISEEQLFYCNQRGLTTEDAVGLIVNGYAREVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
ISLEGSVG
Sbjct: 473 AISLEGSVG 481
>gi|298207473|ref|YP_003715652.1| hypothetical protein CA2559_04440 [Croceibacter atlanticus
HTCC2559]
gi|83850109|gb|EAP87977.1| hypothetical protein CA2559_04440 [Croceibacter atlanticus
HTCC2559]
Length = 481
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 326/489 (66%), Positives = 397/489 (81%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + ++++ +YKYGF T+I+ D P GLNEDI+R IS KK EP+WM EWRL
Sbjct: 1 MAYTEDDLQ--KELETKEYKYGFYTDIESDTFPVGLNEDIVRAISLKKEEPEWMTEWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W M++P WA + YP DF ++ YY+AP +SLD+VDPELL T++KLGI I
Sbjct: 59 AFREWEKMEEPDWANVNYPKPDFQNISYYSAPNKKPKYESLDEVDPELLDTFKKLGISID 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAG VAVD V DSVSV TTFK+ L + G+IF ISEAI EHP+LV+K++ +V
Sbjct: 119 EQKKLAG-----VAVDIVMDSVSVATTFKKTLAEKGIIFCSISEAIKEHPELVRKHIGSV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++ADEGSY
Sbjct: 174 VPQKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVVADEGSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNWYPG+++GKGG++NFVTKRG
Sbjct: 234 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWYPGNAEGKGGVFNFVTKRGI 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+HL K
Sbjct: 294 C-EKNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFYSIAVTNNYQQADTGTKMIHLGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ A ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 353 NTKSTIISKGISAGHSQNSYRGLVQINSRATNARNFSQCDSLLMGNKCGAHTFPYIETKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI ++ +FYC QRGI E AIALIVNGF ++VL KLPMEFAVEAQKL+
Sbjct: 413 KTAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKDVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 473 EISLEGSVG 481
>gi|89900646|ref|YP_523117.1| cysteine desulfurase activator complex subunit SufB [Rhodoferax
ferrireducens T118]
gi|89345383|gb|ABD69586.1| Iron-regulated ABC transporter membrane component SufB [Rhodoferax
ferrireducens T118]
Length = 478
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 312/489 (63%), Positives = 387/489 (79%), Gaps = 11/489 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ++ + YK+GF T+I D A KGL+ED IR IS KKNEP+W+LE+RL
Sbjct: 1 MSAV------LQNLVNQPYKHGFVTDIASDVAAKGLSEDTIRLISNKKNEPEWLLEFRLK 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R WLTM DP WA +++P IDF + YYAAPK +S+D+VDPELLRT+EKLG+P+
Sbjct: 55 AFRHWLTMTDPGWANVKHPKIDFQAISYYAAPKPKAKLKSMDEVDPELLRTFEKLGVPMH 114
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG VAVD +FDSVSV TT+K +L + G+IF ISEA+ HP+LVK+YL +V
Sbjct: 115 ERAALAG-----VAVDVIFDSVSVTTTYKAKLAEVGIIFGSISEAVQNHPELVKQYLGSV 169
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+YAALNSAVFTDGSF +IPKGV+CPM+LSTYFRIN + TGQFERTLI+A+EG+
Sbjct: 170 VPAADNYYAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTQDTGQFERTLIVAEEGAS 229
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQ D NQLHAAVVELVALDNA+IKYSTVQNWY GD G GGIYNFVTKRG
Sbjct: 230 VSYLEGCTAPQFDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGVGGIYNFVTKRGL 289
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG+ S+ISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ K
Sbjct: 290 CRGVNSRISWTQVETGSAITWKYPSCILMGDNSVGEFYSVAVTNHHQQADTGTKMIHIGK 349
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S IVSKGISAG S+N+YRG V V GA +RN++QCDS+L+G+ C A+T PYI+ +N
Sbjct: 350 NTRSTIVSKGISAGQSSNSYRGLVKVMPGADGARNYSQCDSMLVGDKCSANTFPYIQVRN 409
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEA+TSKI ++ +FY QRGI E A+++I+NGF ++V ++LPMEFAVEA KL+
Sbjct: 410 QSAQVEHEASTSKIGEDQMFYFAQRGIGAEEAVSMIINGFCKDVFRQLPMEFAVEATKLL 469
Query: 481 DISLEGSVG 489
LEGSVG
Sbjct: 470 GFKLEGSVG 478
>gi|78048635|ref|YP_364810.1| cysteine desulfurase activator complex subunit SufB [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325925547|ref|ZP_08186935.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
perforans 91-118]
gi|78037065|emb|CAJ24810.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325544051|gb|EGD15446.1| Iron-regulated ABC transporter membrane component SufB [Xanthomonas
perforans 91-118]
Length = 485
Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats.
Identities = 313/480 (65%), Positives = 385/480 (80%), Gaps = 6/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ + +Y GF T I+ D P GL+ED+IR +SAKK+EP WM +WRL AYR WL M
Sbjct: 12 QILERLGRRYDAGFITEIESDSLPPGLDEDVIRALSAKKDEPQWMTDWRLEAYRHWLKMP 71
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA+++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+ LAG
Sbjct: 72 MPEWAKLQISPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHERAKLAG-- 128
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++V++YL +VVPVGDN++A
Sbjct: 129 ---VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVRQYLGSVVPVGDNYFA 185
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IP GVRCPMELSTYFRIN TGQFERTLI+ ++ +YVSYLEGCTA
Sbjct: 186 ALNSAVFSDGSFVFIPAGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVSYLEGCTA 245
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P RDENQLHAAVVELV L++AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CRG RSK++
Sbjct: 246 PMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECRGARSKVT 305
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T S+IVSK
Sbjct: 306 WTQVETGSAITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRTKSKIVSK 365
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG NTYRG+V V R A +RN+TQCDSLLIG CGAHT PYIE KN +EHEA
Sbjct: 366 GISAGRGQNTYRGQVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEA 425
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++SLEGSVG
Sbjct: 426 TTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEVSLEGSVG 485
>gi|282897161|ref|ZP_06305163.1| FeS assembly protein SufB [Raphidiopsis brookii D9]
gi|281197813|gb|EFA72707.1| FeS assembly protein SufB [Raphidiopsis brookii D9]
Length = 479
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 310/480 (64%), Positives = 387/480 (80%), Gaps = 6/480 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + YKYGF T+I+ D P+GLNE++IR ISAKK EP++MLE+RL AYR+WL M +
Sbjct: 5 VKTLVNQPYKYGFVTDIETDTIPRGLNEEVIRLISAKKQEPEFMLEFRLRAYRQWLKMME 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGP-QSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA + Y I++ D+ YY+APK SL++VDP LL T+EKLGI + EQ+ LA
Sbjct: 65 PIWAHVNYTPINYQDIVYYSAPKQKKAKLNSLEEVDPTLLETFEKLGISLSEQKRLA--- 121
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDA+FDSVSV TTFKE+L + GVIF ISEA+ EHP+LVKKYL +VVP+GDN++A
Sbjct: 122 --NVAVDAIFDSVSVATTFKEKLAEDGVIFCSISEALREHPELVKKYLGSVVPIGDNYFA 179
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFVYIPKGV+CPMELSTYFRIN TGQFERTLI+A+E SYVSYLEGCTA
Sbjct: 180 ALNSAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEESSYVSYLEGCTA 239
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D NQLHAAVVELVALDNAEIKYSTVQNWY GD GKGGIYNFVTKRG C+G+ SKIS
Sbjct: 240 PMYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKRGLCQGVNSKIS 299
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+ KNT S I+SK
Sbjct: 300 WTQVETGSAITWKYPSCVLVGDNSIGEFYSVALTNNRQQADTGTKMIHIGKNTRSTIISK 359
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S+N+YRG V ++ A +RN++QCDS+LIG+N A+T PYI+ +N++ +EHEA
Sbjct: 360 GISAGKSSNSYRGLVKINPSAKGARNYSQCDSMLIGDNAQANTFPYIQVQNNTGKVEHEA 419
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI ++ LF+ QRGI E A++++++GF ++V +LPMEFAVEA KL+ + LEGSVG
Sbjct: 420 STSKIGEDQLFFFAQRGISAEDAVSMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG 479
>gi|296136904|ref|YP_003644146.1| FeS assembly protein SufB [Thiomonas intermedia K12]
gi|295797026|gb|ADG31816.1| FeS assembly protein SufB [Thiomonas intermedia K12]
Length = 481
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 329/486 (67%), Positives = 399/486 (82%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ + + Y GF + I+ D APKGL EDIIR ISAKKNEP+++L+WRL AYR
Sbjct: 1 MSQSNPSLVEFLERDYAAGFISPIESDLAPKGLGEDIIRLISAKKNEPEFLLQWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT+ +P+WA+I +P ID+ ++YYAAPK P+SLD+VDPELLR YEKLGIP+ E+
Sbjct: 61 HWLTLAEPTWAKIHHPPIDYQAIHYYAAPKRDKAPKSLDEVDPELLRVYEKLGIPLHERA 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG VAVDAVFDSVSV TTFK++L + G+IF S+A+ HP+LV++YL TVVP
Sbjct: 121 ALAG-----VAVDAVFDSVSVATTFKDKLAQHGIIFCSFSDAVQNHPELVQQYLGTVVPP 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDNF+AALN+AVFTDGSFVYIPKGVRCPMELSTYFRIN K +GQFERTLII+DEG+ VSY
Sbjct: 176 GDNFFAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINAKDSGQFERTLIISDEGAQVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP+RDENQLHAAVVE++ALD+A +KYSTVQNWYPGD GKGGIYN VTKRG+CRG
Sbjct: 236 LEGCTAPRRDENQLHAAVVEIIALDDARVKYSTVQNWYPGDKDGKGGIYNIVTKRGECRG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
RS+ISWTQ+ETGSAITWKYPS LLRG+ S GEFYS+A++N FQQ D+GTKM+H+ +NT
Sbjct: 296 ARSRISWTQVETGSAITWKYPSVLLRGDDSVGEFYSVALTNHFQQADTGTKMIHIGRNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG +NTYRG V V A +RN+TQCDSLLIG+ CGAHT PYIE +N S
Sbjct: 356 STIVSKGISAGRGSNTYRGLVKVLPKAEGARNYTQCDSLLIGDRCGAHTFPYIEVRNPSA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTS++ ++ LFYC+QRGI E A+ALIV GF REV+++LPMEFAVEAQKL+ +S
Sbjct: 416 QVEHEATTSRVGEDQLFYCMQRGISAEDAVALIVGGFAREVVKQLPMEFAVEAQKLLGVS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|298387895|ref|ZP_06997444.1| FeS assembly protein SufB [Bacteroides sp. 1_1_14]
gi|298259302|gb|EFI02177.1| FeS assembly protein SufB [Bacteroides sp. 1_1_14]
Length = 484
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 320/486 (65%), Positives = 394/486 (81%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T + D +GLNED++R IS+KK+EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTEVHTDVIERGLNEDVVRLISSKKDEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD+ GKGG+YNFVTKRG+C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAAGKGGVYNFVTKRGNCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 VDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 VVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLTIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|29348815|ref|NP_812318.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
thetaiotaomicron VPI-5482]
gi|253568840|ref|ZP_04846250.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 1_1_6]
gi|29340721|gb|AAO78512.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|251840859|gb|EES68940.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 1_1_6]
Length = 484
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 320/486 (65%), Positives = 395/486 (81%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T + D +GLNED++R IS+KK+EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTEVHTDVIERGLNEDVVRLISSKKDEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 VDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 VVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLTIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|114319886|ref|YP_741569.1| cysteine desulfurase activator complex subunit SufB
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226280|gb|ABI56079.1| Iron-regulated ABC transporter membrane component SufB
[Alkalilimnicola ehrlichii MLHE-1]
Length = 482
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 315/487 (64%), Positives = 386/487 (79%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + D + + Y+ GF T+I+ + P GL+ED +RFISAKK EP+WMLEWRL AYR
Sbjct: 1 MSASKDIIEQHTKKGYEAGFTTDIEQEHLPPGLSEDTVRFISAKKGEPEWMLEWRLEAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQ 122
WL M P WA + YP IDF + Y+AAPKS P+SL+DVDP+LL TYEKLG+P+ E+
Sbjct: 61 NWLKMPHPRWAHVDYPQIDFQAISYFAAPKSDDDRPKSLEDVDPKLLETYEKLGVPMHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAG VAVDAVFDSVS+ TT++E+L + G+IF +SEA+ EHPDLVKKY+ +VVP
Sbjct: 121 EQLAG-----VAVDAVFDSVSIGTTYREKLAEQGIIFCSMSEAVREHPDLVKKYIGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFR+N TGQFERTLIIA+EG+ VS
Sbjct: 176 KGDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRMNASNTGQFERTLIIAEEGAEVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RD+NQLHAAVVELVA +A IKYSTVQNWYPGD GKGGIYNFVTKRG C
Sbjct: 236 YLEGCTAPMRDDNQLHAAVVELVAHQDASIKYSTVQNWYPGDENGKGGIYNFVTKRGLCE 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+HL KNT
Sbjct: 296 GARSKISWTQVETGSAITWKYPSCVLKGDDSTGEFYSVAVTRGRQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISA +YRG V + A+ +RN++QCDS+L+ + CGAHT PYI+ ++
Sbjct: 356 KSTIISKGISADHGQQSYRGLVRIAPTASGARNYSQCDSMLMSDTCGAHTFPYIDVQHPG 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEATTSKIS++ +FY QRG+ EE A+ L+VNGF +EV ++LPMEFAVEAQ L+ +
Sbjct: 416 AQLEHEATTSKISEDQIFYLRQRGLSEEDAVNLVVNGFCKEVFKELPMEFAVEAQALLAV 475
Query: 483 SLEGSVG 489
+LE SVG
Sbjct: 476 TLEDSVG 482
>gi|120437459|ref|YP_863145.1| cysteine desulfurase activator complex subunit SufB [Gramella
forsetii KT0803]
gi|117579609|emb|CAL68078.1| FeS assembly protein SufB [Gramella forsetii KT0803]
Length = 481
Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats.
Identities = 330/489 (67%), Positives = 392/489 (80%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + ++++ +Y+YGF T+I+ D P GLNEDI+R IS KK EP+WM EWRL
Sbjct: 1 MAYTEDDLK--KELETKEYEYGFYTDIESDTFPVGLNEDIVRAISKKKEEPEWMTEWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR W M +P WA ++YP DF ++ YY+AP SLD+VDPELL T++KLGI I
Sbjct: 59 AYRAWEDMIEPEWANVKYPKPDFQNISYYSAPNKKPKYDSLDEVDPELLDTFKKLGISID 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAG VAVD V DSVSV TTFK+ L + G+IF ISEAI EHP+LVKKYL TV
Sbjct: 119 EQKKLAG-----VAVDIVMDSVSVTTTFKKTLAEKGIIFCSISEAIKEHPELVKKYLGTV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++ADE SY
Sbjct: 174 VPKKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVVADEDSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALD +EIKYSTVQNW+PG+ +GKGG++NFVTKRG
Sbjct: 234 VSYLEGCTAPSRDENQLHAAVVELVALDGSEIKYSTVQNWFPGNKEGKGGVFNFVTKRGL 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+HL K
Sbjct: 294 C-EDNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFYSIAVTNNWQQADTGTKMIHLGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ A ++RNF+QCDSLL+GN CGAHT PYIE KN
Sbjct: 353 NTKSTIISKGISAGQSQNSYRGLVQINGRAHNARNFSQCDSLLMGNKCGAHTFPYIEVKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 413 KSAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 473 EISLEGSVG 481
>gi|153809153|ref|ZP_01961821.1| hypothetical protein BACCAC_03463 [Bacteroides caccae ATCC 43185]
gi|149128129|gb|EDM19349.1| hypothetical protein BACCAC_03463 [Bacteroides caccae ATCC 43185]
Length = 484
Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats.
Identities = 321/486 (66%), Positives = 395/486 (81%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T + D +GLNED+IR IS+KK+EP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDEVDPELIKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKYL +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYLGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 VDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 VVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLTIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|148240486|ref|YP_001225873.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. WH 7803]
gi|147849025|emb|CAK24576.1| SufB protein, Fe-Scluster assembly [Synechococcus sp. WH 7803]
Length = 479
Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats.
Identities = 301/483 (62%), Positives = 376/483 (77%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+ED++R IS KK EPD++L++RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIAKGLSEDVVRLISEKKAEPDFLLQFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + YP ID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYPPIDYQDIVYYAAPKQQEKKASLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F SEA+ EHPDL+++YL TVV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPDLIERYLGTVVASNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGARS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNRQQADTGTKMVHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + GA+ +RN++QCDS+LIG+ GA+T PYI S+ +E
Sbjct: 357 VSKGISAGHSSNSYRGLVQIGPGASGARNYSQCDSMLIGDQAGANTYPYIRSQQPDSAVE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|189459829|ref|ZP_03008614.1| hypothetical protein BACCOP_00459 [Bacteroides coprocola DSM 17136]
gi|189433439|gb|EDV02424.1| hypothetical protein BACCOP_00459 [Bacteroides coprocola DSM 17136]
Length = 491
Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats.
Identities = 323/488 (66%), Positives = 396/488 (81%), Gaps = 6/488 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + V+++ ++YKYGF T + D KGLNED++R ISAKK EP+W+LE+RL AY
Sbjct: 9 EESQKNEFVKQLTQEKYKYGFTTEVHTDIIEKGLNEDVVRLISAKKGEPEWLLEFRLKAY 68
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
R WLTM+ P+WA + P ID+ + YYA P K GP+S+D+VDPEL++T+ KLGIP+ E
Sbjct: 69 RYWLTMEMPTWAHLNIPEIDYQAISYYADPTKKKEGPKSMDEVDPELVKTFNKLGIPLEE 128
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q L+G +AVDAV DSVSV TTFKE L + G+IF +SEA+ EHPDLVKKYL +VV
Sbjct: 129 QMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSMSEAVREHPDLVKKYLGSVV 183
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD+ SYV
Sbjct: 184 GYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDDSYV 243
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE+V LD AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C
Sbjct: 244 SYLEGCTAPMRDENQLHAAIVEIVVLDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNC 303
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KN
Sbjct: 304 KGVDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKN 363
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G++CGAHT PY++ N
Sbjct: 364 TRSTIVSKGISAGKSQNSYRGLVRVSERADNARNYSQCDSLLLGSHCGAHTFPYMDIHNE 423
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 424 TAIVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLS 483
Query: 482 ISLEGSVG 489
ISLEGSVG
Sbjct: 484 ISLEGSVG 491
>gi|30249421|ref|NP_841491.1| cysteine desulfurase activator complex subunit SufB [Nitrosomonas
europaea ATCC 19718]
gi|30138784|emb|CAD85361.1| Uncharacterized protein family UPF0051 [Nitrosomonas europaea ATCC
19718]
Length = 478
Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats.
Identities = 313/489 (64%), Positives = 392/489 (80%), Gaps = 11/489 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV ++ + YK+GF T+I+ D APKGLNEDIIR IS+KKNEP+W+L +RL
Sbjct: 1 MSAV------LQHLVNQPYKHGFVTDIEADIAPKGLNEDIIRLISSKKNEPEWLLAFRLE 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR+WL M +P+W ++YP IDF D+ YY+APK S+D+VDPELLRT+EKLG+P+
Sbjct: 55 AYRKWLDMVEPAWQNVKYPKIDFQDISYYSAPKPKKKLASMDEVDPELLRTFEKLGVPMH 114
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG VAVD +FDSVSV TT+KE+L + G+IF ISEA+ ++P+L+++YL TV
Sbjct: 115 ERAALAG-----VAVDVIFDSVSVATTYKEKLAEVGIIFCSISEAVQKYPELIRQYLGTV 169
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP GDN+YAALNSAVFTDGSF +IPKGV+CPM+LSTYFRIN + +GQFERTLIIA+EG+
Sbjct: 170 VPPGDNYYAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIIAEEGAS 229
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP+ D NQLHAAVVELVALD+A+IKYSTVQNWY GD G GGIYNFVTKRG
Sbjct: 230 VSYLEGCTAPRFDTNQLHAAVVELVALDDADIKYSTVQNWYAGDENGVGGIYNFVTKRGL 289
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+G S+ISWTQ+ETGSAITWKYPSC+LRGE S GEFYS+A++N QQ D+GTKM+H+
Sbjct: 290 AKGRNSRISWTQVETGSAITWKYPSCILRGENSVGEFYSVAVTNHHQQADTGTKMIHIGA 349
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S IVSKGISAG SN++YRG V + A ++RN++QCDS+LIG+ CGAHT PYI+ +N
Sbjct: 350 NTRSTIVSKGISAGQSNSSYRGLVRIAPTARNARNYSQCDSMLIGSQCGAHTFPYIQVQN 409
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEA+TSKI ++ LFY QRGI E A+++I+NGF +EV Q+LP+EFAVEA KL+
Sbjct: 410 DSAQVEHEASTSKIGEDQLFYFAQRGIGAEEAVSMIINGFCKEVFQQLPLEFAVEATKLL 469
Query: 481 DISLEGSVG 489
LEGSVG
Sbjct: 470 SFKLEGSVG 478
>gi|294626271|ref|ZP_06704874.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664776|ref|ZP_06730102.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292599417|gb|EFF43551.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605463|gb|EFF48788.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 485
Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats.
Identities = 315/480 (65%), Positives = 387/480 (80%), Gaps = 6/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ + +Y GF T I+ D P GL+ED+IR +SAKK+EP WM +WRL AYR WL M
Sbjct: 12 QILERLGRRYDAGFITEIESDSLPPGLDEDVIRALSAKKDEPQWMTDWRLEAYRHWLKMP 71
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA+++ AIDF L YY+APK SLD+V ELL TY+KLG+P+ E+ LAG
Sbjct: 72 MPEWAKLQISAIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHERAKLAG-- 128
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP++V++YL +VVPVGDN++A
Sbjct: 129 ---VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPEIVRQYLGSVVPVGDNYFA 185
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +YVSYLEGCTA
Sbjct: 186 ALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAYVSYLEGCTA 245
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P RDENQLHAAVVELV L++AEIKYSTVQNWYPGD +G+GGIYNFVTKR +CRG RSK++
Sbjct: 246 PMRDENQLHAAVVELVTLEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRAECRGARSKVT 305
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K T S+IVSK
Sbjct: 306 WTQVETGSAITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRTKSKIVSK 365
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG NTYRG+V V R A +RN+TQCDSLLIG CGAHT PYIE KN +EHEA
Sbjct: 366 GISAGRGQNTYRGQVKVDRNADGARNYTQCDSLLIGKQCGAHTFPYIEVKNPGATVEHEA 425
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TTSKISD+ LFYC RGI +E A++LIV+GF ++V ++LPMEFAVEA+KL+++SLEGSVG
Sbjct: 426 TTSKISDDQLFYCRARGISQEDAVSLIVDGFCKQVFRELPMEFAVEAKKLLEVSLEGSVG 485
>gi|254498598|ref|ZP_05111318.1| cysteine desulfurase activator complex subunit SufB [Legionella
drancourtii LLAP12]
gi|254352189|gb|EET11004.1| cysteine desulfurase activator complex subunit SufB [Legionella
drancourtii LLAP12]
Length = 486
Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats.
Identities = 326/489 (66%), Positives = 401/489 (82%), Gaps = 6/489 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
V ++ +++ + +Y++GF T+I+V+ GLNED+IR +SA K EP+++LEWRL A
Sbjct: 3 SIVAKSSEQINSLLDREYQHGFITDIEVETFEPGLNEDVIRRLSAIKGEPEFLLEWRLKA 62
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIR 120
YR WLTM P W+ + YP +D++ + YY+APKS P+SLD+VDPELLRTYEKLGIP+R
Sbjct: 63 YRHWLTMPHPEWSSVYYPPVDYNAISYYSAPKSKTNAPKSLDEVDPELLRTYEKLGIPLR 122
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQE+LAG VAVDAVFDSVSV TTFK +L + GVIF P SEA+ ++P+L+ +YL +V
Sbjct: 123 EQEMLAG-----VAVDAVFDSVSVATTFKAKLAEKGVIFCPFSEAVHKYPELLMQYLGSV 177
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD SY
Sbjct: 178 VPYRDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAASTGQFERTLIVADVDSY 237
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALD A+IKYSTVQNWYPGD +GKGGIYNFVTKRG
Sbjct: 238 VSYLEGCTAPMRDENQLHAAVVELVALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGA 297
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N +QQ D+GTKM+H+ K
Sbjct: 298 CRGKRSKISWTQIETGSAITWKYPSVVLQGDDSVGEFYSVALTNNYQQADTGTKMIHIGK 357
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG ++N YRG V + A ++RN+TQCDS+L+G+ C AHT PYIE KN
Sbjct: 358 NTRSTIISKGISAGCAHNAYRGLVRIAPTATNARNYTQCDSMLMGSECSAHTFPYIEVKN 417
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKIS+E LFYC QRGI E A+++IVNGF ++VL++LPMEFAVEA KL+
Sbjct: 418 PTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLL 477
Query: 481 DISLEGSVG 489
+SLEG+VG
Sbjct: 478 GLSLEGAVG 486
>gi|255692956|ref|ZP_05416631.1| FeS assembly protein SufB [Bacteroides finegoldii DSM 17565]
gi|260621267|gb|EEX44138.1| FeS assembly protein SufB [Bacteroides finegoldii DSM 17565]
Length = 484
Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats.
Identities = 323/486 (66%), Positives = 395/486 (81%), Gaps = 6/486 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E V+++ ++YKYGF T + D +GLNED+IR IS+KKNEP+W+LE+RL AYR
Sbjct: 4 EEPNKYVKELTQEKYKYGFTTEVHTDVIERGLNEDVIRLISSKKNEPEWLLEFRLKAYRH 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT++ P+WA +R P ID+ + YYA P K GP+S+++VDPEL++T+ KLGIP+ EQ
Sbjct: 64 WLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEEQM 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 124 ALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVVGY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGDS+GKGG+YNFVTKRG+C+G
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDSEGKGGVYNFVTKRGNCKG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 299 VDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNFQQADTGTKMIHLGKNTR 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 359 STIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNETA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+ IS
Sbjct: 419 VVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLTIS 478
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 479 LEGSVG 484
>gi|300863815|ref|ZP_07108740.1| cysteine desulfurase activator complex subunit SufB [Oscillatoria
sp. PCC 6506]
gi|300338163|emb|CBN53886.1| cysteine desulfurase activator complex subunit SufB [Oscillatoria
sp. PCC 6506]
Length = 479
Score = 548 bits (1411), Expect = e-154, Method: Composition-based stats.
Identities = 305/490 (62%), Positives = 386/490 (78%), Gaps = 12/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +T + YKYGF T I+ D P+GL+ED++R IS+KKNEP +MLE+RL
Sbjct: 1 MSATVQT------LVNQPYKYGFVTEIESDTIPRGLSEDVVRLISSKKNEPAFMLEFRLK 54
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP-QSLDDVDPELLRTYEKLGIPI 119
AYR+WL M +P+W + YP I++ ++ YY+AP+ SL++VDP LL T+EKLGI +
Sbjct: 55 AYRQWLKMTEPTWPHVSYPPINYQEIIYYSAPRQKPKKLNSLEEVDPVLLETFEKLGISL 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDAVFDSVSV TTF+E+L K GVIF ISEA+ ++P+L++KYL +
Sbjct: 115 SEQKRLS-----NVAVDAVFDSVSVATTFREKLAKDGVIFCSISEAVKDYPELIEKYLGS 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPVGDN++AALNSAVF+DGSFVYIPKGV+CPMELSTYFRIN +GQFERTLIIA+ GS
Sbjct: 170 VVPVGDNYFAALNSAVFSDGSFVYIPKGVKCPMELSTYFRINNGDSGQFERTLIIAEAGS 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA+IKYSTVQNWY GD GKGGIYNFVTKRG
Sbjct: 230 SVSYLEGCTAPMFDTNQLHAAVVELVALDNADIKYSTVQNWYAGDENGKGGIYNFVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N QQ D+GTKM+H+
Sbjct: 290 LCQGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNHKQQADTGTKMVHIG 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S+N+YRG V + + SRN++QCDS+LIG+N A+T PYI+ +
Sbjct: 350 KNTRSTIISKGISAGKSSNSYRGLVKMGPNSKGSRNYSQCDSMLIGDNAQANTFPYIQVQ 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEA+TSKI ++ LF+ QRGI E AI+++++GF ++V +LPMEFAVEA KL
Sbjct: 410 NHTAKVEHEASTSKIGEDQLFFFAQRGISPEDAISMMISGFCKDVFNQLPMEFAVEADKL 469
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 470 LSLKLEGSVG 479
>gi|254454078|ref|ZP_05067515.1| FeS assembly protein SufB [Octadecabacter antarcticus 238]
gi|198268484|gb|EDY92754.1| FeS assembly protein SufB [Octadecabacter antarcticus 238]
Length = 507
Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats.
Identities = 342/494 (69%), Positives = 403/494 (81%), Gaps = 10/494 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
++TVD V+ + YK+G+ T+++++ AP GL+EDI+R IS K EP WML+WRL AY R
Sbjct: 15 QDTVDAVQAL-SGTYKHGWNTDVEMEYAPLGLSEDIVRLISEKNEEPQWMLDWRLEAYAR 73
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
WLTM +P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TY KLGIP++EQ
Sbjct: 74 WLTMLEPDWAMVDYPKIDFQDQYYYARPKSMEVKPKSLDEVDPKLLATYAKLGIPLKEQA 133
Query: 124 ILAGVQT--------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV+ KVAVDAVFDSVS+ TTFK+EL K+GVIF ISEAI +HP+LV+K
Sbjct: 134 ILAGVEGAEDMSEAPRKVAVDAVFDSVSLGTTFKDELAKAGVIFCSISEAIKDHPELVRK 193
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL TV+P DN+YA LN+AVF+DGSFVYIPKG +CPMELSTYFRIN + TGQFERTLIIA
Sbjct: 194 YLGTVIPAADNYYACLNAAVFSDGSFVYIPKGTKCPMELSTYFRINAENTGQFERTLIIA 253
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DEGSYVSYLEGCTAP+RD QLHAA VEL+ +D+AEIKYSTVQNW+PGD G GGIYNFV
Sbjct: 254 DEGSYVSYLEGCTAPKRDIAQLHAACVELILMDDAEIKYSTVQNWFPGDENGVGGIYNFV 313
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 314 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKM 373
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRIVSKGISAG + NTYRG VS+H A SRN+TQCDSLLIG+ CGAHT+PY
Sbjct: 374 VHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPY 433
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE KN+S +EHEATTSKI DE +FYC RG+ EE A+ALIVNGF +EVLQ LPMEFA+E
Sbjct: 434 IEVKNNSSRVEHEATTSKIDDEQMFYCRSRGMGEEEAVALIVNGFAKEVLQALPMEFAME 493
Query: 476 AQKLIDISLEGSVG 489
AQ L+ ISLEGSVG
Sbjct: 494 AQALVAISLEGSVG 507
>gi|270158823|ref|ZP_06187480.1| FeS assembly protein SufB [Legionella longbeachae D-4968]
gi|289166384|ref|YP_003456522.1| component of SufBCD complex [Legionella longbeachae NSW150]
gi|269990848|gb|EEZ97102.1| FeS assembly protein SufB [Legionella longbeachae D-4968]
gi|288859557|emb|CBJ13522.1| component of SufBCD complex [Legionella longbeachae NSW150]
Length = 482
Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats.
Identities = 323/487 (66%), Positives = 399/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ +++ + +Y++GF T+I+VD GL+E++IR +SA K EP+++LEWRL AY+
Sbjct: 1 MAKSSEQINSLLDREYQHGFTTDIEVDTFAPGLDEEVIRRLSAVKGEPEFLLEWRLKAYQ 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQ 122
WLTM P W+ + YP +DF + YY+APK P+SLD+VDPELLRTYEKLGIP+REQ
Sbjct: 61 HWLTMSPPQWSSVHYPPVDFQSISYYSAPKMKKDAPKSLDEVDPELLRTYEKLGIPLREQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E+LAG VAVDAVFDSVSV TTFK +L + GVIF PISEA+ ++P+L+ +YL +VV
Sbjct: 121 EMLAG-----VAVDAVFDSVSVATTFKAKLAEKGVIFCPISEAVHQYPELLMQYLGSVVS 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNFYAALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+AD SYVS
Sbjct: 176 YRDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAASTGQFERTLIVADVDSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVALD A+IKYSTVQNWYPGD +GKGGIYNFVTKRG CR
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACR 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N +QQ D+GTKM+H+ KNT
Sbjct: 296 GKRSKISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNYQQADTGTKMIHIGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG ++N YRG V + A ++RN+TQCDS+L+G+ C AHT PYIE KN +
Sbjct: 356 RSTIISKGISAGKAHNAYRGLVRIAPTAINARNYTQCDSMLMGSECSAHTFPYIEVKNPT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS+E LFYC QRGI E A+++IVNGF ++VL++LPMEFAVEA KL+ +
Sbjct: 416 AQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGL 475
Query: 483 SLEGSVG 489
SLEG+VG
Sbjct: 476 SLEGAVG 482
>gi|88811719|ref|ZP_01126973.1| hypothetical protein NB231_04920 [Nitrococcus mobilis Nb-231]
gi|88791110|gb|EAR22223.1| hypothetical protein NB231_04920 [Nitrococcus mobilis Nb-231]
Length = 482
Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats.
Identities = 326/490 (66%), Positives = 395/490 (80%), Gaps = 9/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A +T + ++ +Y+ GF T+I+ D P GL+EDIIRFIS KK EP+WMLEWRL
Sbjct: 1 MSATTKT---LEELTNRKYEAGFITDIEQDTVPPGLDEDIIRFISEKKAEPEWMLEWRLK 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPI 119
AYR WL M P WA + YP IDF + YY+APK PQSLD++DP+L TY++LGIP+
Sbjct: 58 AYRNWLQMPVPEWANVYYPPIDFQAISYYSAPKRKEDMPQSLDEIDPKLKETYDRLGIPL 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE+LAG VAVDAVFDSVSV T++K +LK+ G+IF +SEAI EHP+LV+KYL +
Sbjct: 118 HEQEMLAG-----VAVDAVFDSVSVATSYKAKLKEKGIIFCSMSEAIREHPELVRKYLGS 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN+YA LNSAVFTDGSFV+IPKGVRCPMELSTYFRIN TGQFERTLIIA+EGS
Sbjct: 173 VVPYTDNYYAGLNSAVFTDGSFVFIPKGVRCPMELSTYFRINAANTGQFERTLIIAEEGS 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+VSYLEGCTAP RDENQLHAAVVEL+ALD+A+IKYSTVQNWYPGD +G+GG+YNFVTKRG
Sbjct: 233 HVSYLEGCTAPVRDENQLHAAVVELIALDDAQIKYSTVQNWYPGDEEGRGGVYNFVTKRG 292
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++ G QQ D+GTKM+H+
Sbjct: 293 LCAGNNSKISWTQVETGSAITWKYPSCVLRGDNSVGEFYSVAVTRGRQQADTGTKMIHMG 352
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGISAG+ +YRG V V A ++RN++QCDS+L+ + CGAHT PYI+ +
Sbjct: 353 KNTRSTIVSKGISAGYGQQSYRGLVRVTPKAENARNYSQCDSMLMSSTCGAHTFPYIDIQ 412
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS+ LEHEATTSKI +E + YC QRGI E A++LIVNGF +EV + LPMEFAVEAQKL
Sbjct: 413 NSTAQLEHEATTSKIGEEQILYCNQRGIATEDAVSLIVNGFCKEVFRTLPMEFAVEAQKL 472
Query: 480 IDISLEGSVG 489
++I+LEGSVG
Sbjct: 473 MEITLEGSVG 482
>gi|90021061|ref|YP_526888.1| cysteine desulfurase activator complex subunit SufB [Saccharophagus
degradans 2-40]
gi|89950661|gb|ABD80676.1| Iron-regulated ABC transporter membrane component SufB
[Saccharophagus degradans 2-40]
Length = 479
Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats.
Identities = 332/482 (68%), Positives = 400/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + Y GF T+++ D P GLNE++I FIS KKNEP+W+LEWRL AYR W M
Sbjct: 4 EQLDHLIRKDYAAGFITDVESDTLPPGLNEEVIAFISNKKNEPEWLLEWRLKAYRAWREM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+P WA + YP IDFD++ YY+APKS+ P+SLD+VDPELLRTYEKLGIP+ EQE+LAG
Sbjct: 64 DEPDWAHVSYPKIDFDEISYYSAPKSMADKPKSLDEVDPELLRTYEKLGIPLHEQEMLAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTF+++L ++GVIF PISEA+ E+P+LVKKYL +VVP DN+
Sbjct: 124 -----VAVDAVFDSVSVGTTFRKKLFEAGVIFCPISEAVHEYPELVKKYLGSVVPQKDNY 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALN AVF+DGSFVYIPKGVRCPMELSTYFRINE TGQFERTLIIADEGS+VSYLEGC
Sbjct: 179 YAALNCAVFSDGSFVYIPKGVRCPMELSTYFRINESKTGQFERTLIIADEGSHVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALDNA+IKYSTVQNWYPGD++GKGGIYNFVTKRG +
Sbjct: 239 TAPMRDENQLHAAVVELVALDNAKIKYSTVQNWYPGDAEGKGGIYNFVTKRGIAH-TNAH 297
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++N QQ D+GTKM+HL KNT S I+
Sbjct: 298 ISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTNNHQQADTGTKMIHLGKNTRSTII 357
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S+N YRG V ++ GA +RN+TQCDSLLIG+ C AHT PYIESKN S +EH
Sbjct: 358 SKGISAGKSSNAYRGLVRMNPGATGARNYTQCDSLLIGDKCAAHTFPYIESKNPSAVVEH 417
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+S++ L+ C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEGS
Sbjct: 418 EATTSKVSEDQLYLCQQRGIDAEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGS 477
Query: 488 VG 489
VG
Sbjct: 478 VG 479
>gi|88807203|ref|ZP_01122715.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
gi|88788417|gb|EAR19572.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
Length = 479
Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats.
Identities = 300/483 (62%), Positives = 376/483 (77%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+ED++R IS KK+EPD++L++RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIAKGLSEDVVRLISGKKDEPDFLLQFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + YP ID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYPPIDYQDIIYYAAPKQQDKKASLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F SEA+ EHP L+++YL TVV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPALIERYLGTVVASNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGARS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNRQQADTGTKMVHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + GA+ +RN++QCDS+LIG+ GA+T PYI S+ +E
Sbjct: 357 VSKGISAGHSSNSYRGLVQIGPGASGARNYSQCDSMLIGDQAGANTYPYIRSQQPDSAVE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|86134640|ref|ZP_01053222.1| FeS assembly protein SufB [Polaribacter sp. MED152]
gi|85821503|gb|EAQ42650.1| FeS assembly protein SufB [Polaribacter sp. MED152]
Length = 482
Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats.
Identities = 334/489 (68%), Positives = 396/489 (80%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E D +++ +Y+YGF T+I+ + KGLNED++R IS KKNEP+WM EWRL
Sbjct: 1 MSKYTEE-DLEQELKTKEYEYGFYTDIESETFAKGLNEDVVRAISKKKNEPEWMTEWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W M +P WA ++YP DF ++ YY+APK SLD+VDP+LL T++KLGI I
Sbjct: 60 AFRVWEKMTEPDWANVKYPKPDFQEIAYYSAPKKKPKLNSLDEVDPDLLETFKKLGISID 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LA VAVD V DSVSV TTFK+ L + G+IFMPISEAI EHP+LVKKYL TV
Sbjct: 120 EQKKLA-----NVAVDIVMDSVSVATTFKKTLGEKGIIFMPISEAIQEHPELVKKYLGTV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGV+CPMELSTYFRINE GTGQFERTL++AD+GSY
Sbjct: 175 VPTSDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINEGGTGQFERTLVVADKGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQRDENQLHAAVVEL+A+D+AEIKYSTVQNW+PGD GKGG++NFVTKRG
Sbjct: 235 VSYLEGCTAPQRDENQLHAAVVELIAMDDAEIKYSTVQNWFPGDENGKGGVFNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G S GEFYSIA++N FQQ D+GTKM+HL K
Sbjct: 295 C-ETNAKISWTQVETGSAVTWKYPSCILKGNNSVGEFYSIAVTNHFQQADTGTKMVHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ A ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 354 NTKSTIISKGISAGQSQNSYRGLVQINSRAENARNFSQCDSLLMGNACGAHTFPYIEAKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTSKI ++ LFYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 414 KSAQIEHEATTSKIGEDQLFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|254424683|ref|ZP_05038401.1| FeS assembly protein SufB [Synechococcus sp. PCC 7335]
gi|196192172|gb|EDX87136.1| FeS assembly protein SufB [Synechococcus sp. PCC 7335]
Length = 479
Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats.
Identities = 304/472 (64%), Positives = 381/472 (80%), Gaps = 6/472 (1%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
YKYGF T+I+ D P+GL+ED++R ISAKK EP +ML++RL AYRRWL +++P+W ++Y
Sbjct: 13 YKYGFVTDIESDSLPRGLSEDVVRAISAKKEEPQFMLDFRLKAYRRWLELEEPTWPNVKY 72
Query: 79 PAIDFDDLYYYAAPK-SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P ID++++ YY+APK S SLD+VDP LL T++KLGI I EQ+ LA VAVD
Sbjct: 73 PPIDYNEIVYYSAPKQSEKKLGSLDEVDPALLDTFDKLGISINEQKRLA-----NVAVDV 127
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
VFDSVS+ TTFK++L K GVIF ISEA+ EHP+LVK+YL TVVPVGDN++ ALNSAVF+
Sbjct: 128 VFDSVSIATTFKKDLAKHGVIFCSISEAVKEHPELVKEYLGTVVPVGDNYFTALNSAVFS 187
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
DGSFVYIPKGV+CPM+LSTYFRIN +GQFERTLI+A+E S V+YLEGCTAP D NQL
Sbjct: 188 DGSFVYIPKGVKCPMDLSTYFRINNGDSGQFERTLIVAEESSSVTYLEGCTAPMYDSNQL 247
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVELVALD+AEIKYSTVQNW+ GD GKGGIYNFVTKRG C+G SKISWTQ+ETGS
Sbjct: 248 HAAVVELVALDSAEIKYSTVQNWFAGDENGKGGIYNFVTKRGLCKGDNSKISWTQVETGS 307
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
AITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+ KNT S I+SKGISAG S
Sbjct: 308 AITWKYPSCVLAGDNSVGEFYSVALTNNYQQADTGTKMVHVGKNTRSTIISKGISAGKSK 367
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
N+YRG V V+ A +RN++QCDS+L+G+ A+T PYI+ +NSS +EHEA+TSKI ++
Sbjct: 368 NSYRGLVKVNPKAEGARNYSQCDSMLLGDASNANTFPYIQVQNSSAQVEHEASTSKIGED 427
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY QRGI E A+++I++GF R+V +LPMEFA EA KL+ + LE SVG
Sbjct: 428 QLFYFAQRGISPEDAVSMIISGFCRDVFNELPMEFAAEADKLLSLKLENSVG 479
>gi|153209325|ref|ZP_01947344.1| FeS assembly SUF system regulator [Coxiella burnetii 'MSU Goat
Q177']
gi|212218766|ref|YP_002305553.1| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii CbuK_Q154]
gi|120575396|gb|EAX32020.1| FeS assembly SUF system regulator [Coxiella burnetii 'MSU Goat
Q177']
gi|212013028|gb|ACJ20408.1| ABC transporter-associated protein [Coxiella burnetii CbuK_Q154]
Length = 631
Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats.
Identities = 329/479 (68%), Positives = 399/479 (83%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ I Y++GF T+I+ D GLNE++IR ISAKK+EP++ML+WRL AYR W+T++
Sbjct: 158 LETIVNKTYEHGFITDIETDVIAPGLNEEVIRLISAKKDEPNFMLDWRLKAYRHWVTLEA 217
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA +R+ ID+ + YYAAPKS P+SL++VDP+LL TY KLGIP+ EQ+ LAG
Sbjct: 218 PQWAHVRFNPIDYQAISYYAAPKSKKKPKSLEEVDPKLLETYTKLGIPLYEQQRLAG--- 274
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVSV TTFKE+L ++GVIF SEA+ +HP+LV+KYL +VVP GDNF+A
Sbjct: 275 --VAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPELVEKYLGSVVPYGDNFFAT 332
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGCTAP
Sbjct: 333 LNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIADEGSYVSYLEGCTAP 392
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
QRDENQLHAAVVELVALDNA+I+Y+TVQNWYPGD +GKGGIYNFVTKRG CRG+ SKISW
Sbjct: 393 QRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGIYNFVTKRGACRGVNSKISW 452
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ KNT S I+SKG
Sbjct: 453 TQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADTGTKMIHIGKNTRSTIISKG 512
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG N+YRG V V A ++RN++QCDSLL+GN CGAHT PY+E KN + +EHEAT
Sbjct: 513 ISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAHTFPYMEIKNKTARVEHEAT 572
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFYC QRGI EE A+++IVNGF ++V QKLPMEFAVEAQKL+++SLEG+VG
Sbjct: 573 TSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPMEFAVEAQKLMEVSLEGAVG 631
>gi|83644268|ref|YP_432703.1| cysteine desulfurase activator complex subunit SufB [Hahella
chejuensis KCTC 2396]
gi|83632311|gb|ABC28278.1| FeS assembly protein SufB [Hahella chejuensis KCTC 2396]
Length = 482
Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats.
Identities = 337/487 (69%), Positives = 401/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + V + +Y+ GF T+I+ + GLNED+IRFISAKKNEP++ML WRL AYR
Sbjct: 1 MSTPENSVDQYIKREYQAGFITDIESEALEPGLNEDVIRFISAKKNEPEFMLNWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQ 122
WL M +P WA + YP IDF+D+ YY+APKS GP+SLD+VDPELL+TYEKLGIP+ E+
Sbjct: 61 EWLNMVEPQWAHVHYPKIDFNDIIYYSAPKSQKDGPKSLDEVDPELLKTYEKLGIPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSV TTFKE+L ++GVIF ISEA+ HP+LV+KYL +VVP
Sbjct: 121 AALAG-----VAVDAVFDSVSVATTFKEKLSEAGVIFCSISEAVRNHPELVEKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ DN++AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIADEGSYVS
Sbjct: 176 IRDNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAAKTGQFERTLIIADEGSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVAL+ AEIKYSTVQNWYPGD +GKGGIYNFVTKRG C
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALEGAEIKYSTVQNWYPGDEEGKGGIYNFVTKRGLCA 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N QQ D+GTKM+H+ KNT
Sbjct: 296 GAHSKISWTQVETGSAITWKYPSVVLKGDHSVGEFYSVALTNNLQQADTGTKMIHMGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG S+++YRG V + A ++RN+TQCDSLLIG CGAHT PYIESKN+S
Sbjct: 356 RSTIISKGISAGRSDSSYRGLVRIGPNADNARNYTQCDSLLIGAKCGAHTFPYIESKNNS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSK+SDE LF C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++
Sbjct: 416 AVVEHEATTSKVSDEQLFLCRQRGIDAERAVSMIVNGFCKEVFKELPMEFAVEAGKLLEV 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|126665742|ref|ZP_01736723.1| component of SufBCD complex [Marinobacter sp. ELB17]
gi|126629676|gb|EBA00293.1| component of SufBCD complex [Marinobacter sp. ELB17]
Length = 482
Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats.
Identities = 334/487 (68%), Positives = 400/487 (82%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ T +VR++ Y++GF T I+ D GLNED+IR +S K EP++MLEWRL AYR
Sbjct: 1 MATTDKEVRELIKRDYEHGFVTEIESDTFEPGLNEDVIRRLSELKQEPEFMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQ 122
RWL M++P WA + YP + ++++ YY+APK PQSLD+VDPELLRTYEKLGIP+ E+
Sbjct: 61 RWLEMEEPDWAHVNYPKVKYNEISYYSAPKRPEDMPQSLDEVDPELLRTYEKLGIPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVSVVTTFKE L+K+GVIF PISEA+ ++P+LVKKYL +VVP
Sbjct: 121 AKLAG-----VAVDAVFDSVSVVTTFKEPLEKAGVIFCPISEAVQKYPELVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN++AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIADEGSYVS
Sbjct: 176 AADNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIADEGSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELV L +A+IKYSTVQNWYPGD GKGGIYNFVTKR C
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVLLKDAQIKYSTVQNWYPGDENGKGGIYNFVTKRAACI 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SK+SWTQ+ETGSA+TWKYPSC+LRG+ S GEFYS+A+++ +QQ D+GTKM+HL KNT
Sbjct: 296 GDNSKVSWTQVETGSAVTWKYPSCILRGDNSVGEFYSVALTHNYQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S ++SKGISAG S+NTYRG + + GA +RNFTQCDSLLIG+ CGAHT PYIESKN S
Sbjct: 356 RSTVISKGISAGRSSNTYRGLIKFNPGAEGARNFTQCDSLLIGDRCGAHTFPYIESKNKS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSK+SDE +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++
Sbjct: 416 AIVEHEATTSKVSDEQMFLCRQRGINAEQAVSMIVNGFCKEVFKELPMEFAVEAGKLLEV 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|225467712|ref|XP_002272917.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 554
Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats.
Identities = 296/487 (60%), Positives = 367/487 (75%), Gaps = 5/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A T DK++KI YK+G+ NI D PKGL+E IR IS +KNEPDWMLE+RL +Y
Sbjct: 73 ATSSTDDKLQKILNRDYKWGWFENIDSDAIPKGLSEKTIRMISERKNEPDWMLEFRLKSY 132
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
++L MK+P W+ RYP IDF D+ YY+ PK SLD+ DPELLR ++KLG+P+ EQ
Sbjct: 133 EKFLKMKEPKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLDEADPELLRYFDKLGVPLNEQ 192
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LA VAVDAV DSVS+ TT ++ L+K+GVIF ISEAI E+PDLV+KYL VVP
Sbjct: 193 NRLA-----NVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVRKYLGRVVP 247
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN+YAALNSAVF+DGSF Y+PK +CPM++STYFRIN TGQFERTLI+AD+ S+V
Sbjct: 248 SDDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINALETGQFERTLIVADDRSFVE 307
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP D NQLHAAVVEL + AEIKYSTVQNWY GD +G+GGIYNFVTKRG C
Sbjct: 308 YLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGRGGIYNFVTKRGLCS 367
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSKISWTQ+ETGSAITWKYPS +L G+ + GEFYS+A++N +QQ D+GTKM+H KNT
Sbjct: 368 GARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHKGKNT 427
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
SRI+SKGISAG S N YRG V V A ++RN +QCDS+LIG+N A+T PYI+ KN +
Sbjct: 428 RSRIISKGISAGNSRNCYRGLVQVQSKAKNARNSSQCDSMLIGDNAAANTYPYIQVKNPT 487
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKI ++ LFY QRGI E A+A +++GF ++V +LP EF E +L+ +
Sbjct: 488 ARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCKDVFNELPDEFGAEVNQLMSL 547
Query: 483 SLEGSVG 489
LEGSVG
Sbjct: 548 KLEGSVG 554
>gi|285017823|ref|YP_003375534.1| ABC transporter-associated protein involved in fe-s cluster
assembly [Xanthomonas albilineans GPE PC73]
gi|283473041|emb|CBA15546.1| probable abc transporter-associated protein involved in fe-s
cluster assembly [Xanthomonas albilineans]
Length = 480
Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats.
Identities = 320/489 (65%), Positives = 390/489 (79%), Gaps = 9/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E + + ++ +Y GF T+I+ D GLNED++R +SAKK+EP WM EWRL
Sbjct: 1 MA--TENAEILERLGR-RYDAGFVTDIESDAFLPGLNEDVVRALSAKKDEPAWMTEWRLA 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WL M P WA++ IDF L YY+APK SLD+V ELL TY+KLG+P+
Sbjct: 58 AYRHWLKMPMPHWAKLDIAPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLH 116
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG VAVDAVFDSVSV TTF++EL + GVIF +SEAI EHP+LVK+YL +V
Sbjct: 117 ERARLAG-----VAVDAVFDSVSVGTTFRKELAEKGVIFCSMSEAIKEHPELVKQYLGSV 171
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPVGDNF+AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ ++ +Y
Sbjct: 172 VPVGDNFFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEDKAY 231
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVAL++AEIKYSTVQNWYPGD +G+GGIYNFVTKRG+
Sbjct: 232 VSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQNWYPGDEEGRGGIYNFVTKRGE 291
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RSKI+WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D+GTKM+H+ K
Sbjct: 292 CRGARSKIAWTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQADTGTKMIHVGK 351
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
T S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGAHT PYIE K+
Sbjct: 352 RTKSKIVSKGISAGHGQNTYRGLVKVERSAEGARNYTQCDSLLIGKRCGAHTFPYIEVKH 411
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKISD+ LFYC RGI +E A+++IV+GF ++V ++LPMEFAVEA+KL+
Sbjct: 412 PTATVEHEATTSKISDDQLFYCRARGIDQENAVSMIVDGFCKQVFRELPMEFAVEAKKLL 471
Query: 481 DISLEGSVG 489
++SLEGSVG
Sbjct: 472 EVSLEGSVG 480
>gi|124022013|ref|YP_001016320.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9303]
gi|123962299|gb|ABM77055.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9303]
Length = 480
Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats.
Identities = 295/480 (61%), Positives = 375/480 (78%), Gaps = 5/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V ++ + YKYGF T+I+ +K PKGL+ED++R IS KKNEP ++L++R+ AYR WL ++
Sbjct: 6 HVGQLVSEPYKYGFVTDIETEKIPKGLDEDVVRLISEKKNEPQFLLDFRIRAYRHWLKLQ 65
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA + YP ID+ D+ YYAAPK SLD+VDP LL T++KLGIP+ EQ+ L+
Sbjct: 66 TPDWAGLGYPPIDYQDIVYYAAPKQKEKKNSLDEVDPALLETFDKLGIPLSEQKRLS--- 122
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVS+ TT+KE+L + GV+F I++A+ E+P+LV++YL TVVP DN++A
Sbjct: 123 --NVAVDAVFDSVSIATTYKEKLAEHGVVFCSITDAVNEYPELVRRYLGTVVPSNDNYFA 180
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IP+GV CPMELS+YFRIN GQFERTLI+A+EG+ VSYLEGCTA
Sbjct: 181 ALNSAVFSDGSFVFIPRGVECPMELSSYFRINSGDIGQFERTLIVAEEGASVSYLEGCTA 240
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D N LHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG C G RSKIS
Sbjct: 241 PMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGHCCGERSKIS 300
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W+Q+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+HL T S IVSK
Sbjct: 301 WSQVETGSAITWKYPSCILQGADSVGEFYSVALTNHRQQADTGTKMIHLGPRTRSTIVSK 360
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S N+YRG V + A +++N++QCDS+LIG+ GA+T PYI S+ ++EHEA
Sbjct: 361 GISAGHSANSYRGLVQMGPKAVNAKNYSQCDSMLIGDQAGANTYPYIRSQQPDASIEHEA 420
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+T +IS++ LFY RGI EAAI++IV+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 421 STCRISEDQLFYLQSRGIDFEAAISMIVSGFCRDVFSQLPMEFAAEADKLLALKLEGSVG 480
>gi|167997033|ref|XP_001751223.1| ATP-binding cassette transporter, subfamily I, member 15, ABC
component protein PpABCI15 [Physcomitrella patens subsp.
patens]
gi|162697204|gb|EDQ83540.1| ATP-binding cassette transporter, subfamily I, member 15, ABC
component protein PpABCI15 [Physcomitrella patens subsp.
patens]
Length = 480
Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats.
Identities = 303/481 (62%), Positives = 369/481 (76%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D +++ YKYGF ++I+ PKGL+E+ +R ISAKKNEP+WML +RL A+++W M
Sbjct: 5 DTIQQFLKRDYKYGFVSDIESVSIPKGLSEETVRLISAKKNEPEWMLNFRLNAFKQWQKM 64
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K+P+W+ +YP IDF D+ YY PK QSLD+VDP+LL T+ KLGIP+ EQ+ LA
Sbjct: 65 KEPTWSDNKYPQIDFQDVCYYTEPKKKETKQSLDEVDPDLLETFAKLGIPLSEQKRLA-- 122
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVS+ TT ++ L +GVIF ISEAI E+PDLVKKYL VVPV DN+Y
Sbjct: 123 ---NVAVDAVFDSVSIATTHRKTLMAAGVIFCSISEAIREYPDLVKKYLGKVVPVADNYY 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSF Y+PK PME+STYFRIN TGQFERTLI+ DE +YVSYLEGCT
Sbjct: 180 AALNSAVFSDGSFCYVPKDTVSPMEISTYFRINAMETGQFERTLIVCDENAYVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D+NQLHAAVVEL AEIKYSTVQNWY GDS+GKGGIYNFVTKRG C G RSKI
Sbjct: 240 APAYDKNQLHAAVVELYCASGAEIKYSTVQNWYAGDSEGKGGIYNFVTKRGLCDGARSKI 299
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N QQ D+GTKM+H+ KNT SRIVS
Sbjct: 300 SWTQVETGSAITWKYPSVVLKGDNSIGEFYSVALTNNKQQADTGTKMIHVGKNTRSRIVS 359
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N YRG V V A ++RNF+QCDS+LIG+ GA+T PYI K+ S +EHE
Sbjct: 360 KGISAGNSVNCYRGLVQVQPSAHNARNFSQCDSMLIGDQAGANTYPYITVKDPSARVEHE 419
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI ++ LFY QRGI E A+A I+ GF REV ++LP+EFA E +L+ + LEGSV
Sbjct: 420 ASTSKIGEDQLFYFQQRGIDAEKAVAAIIGGFCREVFKELPLEFAAEVNQLMSLKLEGSV 479
Query: 489 G 489
G
Sbjct: 480 G 480
>gi|168014025|ref|XP_001759559.1| ATP-binding cassette transporter, subfamily I, member 11, ABC
component protein PpABCI11 [Physcomitrella patens subsp.
patens]
gi|162689098|gb|EDQ75471.1| ATP-binding cassette transporter, subfamily I, member 11, ABC
component protein PpABCI11 [Physcomitrella patens subsp.
patens]
Length = 480
Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats.
Identities = 301/481 (62%), Positives = 369/481 (76%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D +++ YKYGF ++I+ PKGL+E+ +R ISAKKNEP+WML +RL A+++W M
Sbjct: 5 DTIQQFLKRDYKYGFVSDIESVSIPKGLSENTVRLISAKKNEPEWMLNFRLNAFKQWQKM 64
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K+P+W+ +YP IDF D+ YY PK QSLD+VDP+LL T+ KLGIP+ EQ+ LA
Sbjct: 65 KEPTWSDNKYPQIDFQDVCYYTEPKKKETKQSLDEVDPDLLETFAKLGIPLSEQKRLA-- 122
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVS+ TT ++ L +GVIF ISEAI E+PDLVKK+L VVPV DN+Y
Sbjct: 123 ---NVAVDAVFDSVSIATTHRKTLMAAGVIFCSISEAIREYPDLVKKHLGKVVPVADNYY 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSF Y+PK PME+STYFRIN TGQFERTLI+ DE +YVSYLEGCT
Sbjct: 180 AALNSAVFSDGSFCYVPKDTVSPMEISTYFRINAMETGQFERTLIVCDENAYVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D+NQLHAAVVEL AEIKYSTVQNWY GDS+GKGGIYNFVTKRG C G +SKI
Sbjct: 240 APAYDKNQLHAAVVELYCASGAEIKYSTVQNWYAGDSEGKGGIYNFVTKRGLCDGAKSKI 299
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N QQ D+GTKM+H+ KNT SRIVS
Sbjct: 300 SWTQVETGSAITWKYPSVVLKGDGSIGEFYSVALTNNKQQADTGTKMIHVGKNTRSRIVS 359
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N YRG V V A ++RNF+QCDS+LIG+ GA+T PYI K+ S +EHE
Sbjct: 360 KGISAGNSVNCYRGLVQVQPSAHNARNFSQCDSMLIGDQAGANTYPYITVKDPSARVEHE 419
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI ++ LFY QRGI E A+A I+ GF REV ++LP+EFA E +L+ + LEGSV
Sbjct: 420 ASTSKIGEDQLFYFQQRGIDAEKAVAAIIGGFCREVFKELPLEFAAEVNQLMSLKLEGSV 479
Query: 489 G 489
G
Sbjct: 480 G 480
>gi|330814303|ref|YP_004358542.1| iron-sulfur cluster assembly protein SufB [Candidatus Pelagibacter
sp. IMCC9063]
gi|327487398|gb|AEA81803.1| iron-sulfur cluster assembly protein SufB [Candidatus Pelagibacter
sp. IMCC9063]
Length = 483
Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats.
Identities = 334/490 (68%), Positives = 406/490 (82%), Gaps = 8/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M +E ++ + +Y GF T+++ PKGL+E++++FIS +K EP WML+WRL
Sbjct: 1 MSNGQEFINNYNQ--GTEYAQGFVTDVETIDVPKGLSEEVVKFISKQKKEPKWMLDWRLK 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPI 119
A+ R +MK+P W + +YP ID+ DLYYY+APKS P+SLD++DPE+ +TY+KLGIP+
Sbjct: 59 AFERLQSMKEPDWQKPKYPKIDYQDLYYYSAPKSLQDQPKSLDEIDPEIRKTYDKLGIPL 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+G +AVDAVFDSVSV TTFKE+L + GVIF ISEA EHP+LVKKYL +
Sbjct: 119 LEQKKLSG-----IAVDAVFDSVSVATTFKEKLGEIGVIFCSISEATREHPELVKKYLGS 173
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P+ D+F+A LNSAVFTDGSFVYIP GVRCPMELSTYFRIN TGQFERTLIIAD+GS
Sbjct: 174 VIPMSDHFFATLNSAVFTDGSFVYIPPGVRCPMELSTYFRINASNTGQFERTLIIADKGS 233
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA VELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 234 YVSYLEGCTAPMRDENQLHAANVELVALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRG 293
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
CRG SKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+AI+N +Q+ D+GTKM+HL
Sbjct: 294 ACRGKNSKISWTQVETGSAITWKYPSCILQGDNSQGEFYSVAITNNYQKADTGTKMIHLG 353
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S+I+SKGISAG ++NTYRG VS+H A ++NFTQCDSLL+GN CGAHTIPYIE+K
Sbjct: 354 KNTRSKIISKGISAGHADNTYRGMVSIHPKATGAKNFTQCDSLLVGNKCGAHTIPYIENK 413
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S +EHEATTSKIS++ LFYC QRG+ +E A++LIVNGF +EVLQ+LPMEFAVEAQKL
Sbjct: 414 NASSEIEHEATTSKISEDQLFYCRQRGLNQEEAVSLIVNGFCKEVLQQLPMEFAVEAQKL 473
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 474 VGISLEGSVG 483
>gi|126668345|ref|ZP_01739303.1| component of SufBCD complex [Marinobacter sp. ELB17]
gi|126627161|gb|EAZ97800.1| component of SufBCD complex [Marinobacter sp. ELB17]
Length = 482
Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats.
Identities = 336/487 (68%), Positives = 395/487 (81%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ T +V ++ +Y++GF T I+ D GLNED+I +S K EP+WMLEWRL AYR
Sbjct: 1 MATTDKEVNELVKREYEHGFVTEIESDTFEPGLNEDVIARLSGLKKEPEWMLEWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQ 122
RWL M +P+WA + YP ID++ + YY+APK QSLD+VDPELLRTYEKLGIP+ E+
Sbjct: 61 RWLEMDEPNWAHVGYPKIDYNSISYYSAPKRKEDMLQSLDEVDPELLRTYEKLGIPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAG VAVDAVFDSVSV TTFKE L K+GVIF +SEAI EHP+LVKKYL +VVP
Sbjct: 121 EQLAG-----VAVDAVFDSVSVATTFKEPLAKAGVIFCSMSEAIQEHPELVKKYLGSVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNF+A LNSAVF+DG+FVYIPKGVRCPMELSTYFRIN TGQFERTLIIA++ SYVS
Sbjct: 176 AGDNFFAGLNSAVFSDGTFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIAEDSSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVALD+A+IKYSTVQNWYPGD GKGGI+NFVTKRG
Sbjct: 236 YLEGCTAPMRDENQLHAAVVELVALDDAQIKYSTVQNWYPGDENGKGGIFNFVTKRGAAI 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSA+TWKYPSC+LRGE S GEFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 296 GKNSKISWTQVETGSAVTWKYPSCILRGENSVGEFYSVALTNNYQQADTGTKMIHLGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I++KGISA S+N YRG V GA +RNFTQCDSLLIG+ CGAHT PYIESKN S
Sbjct: 356 SSTIIAKGISASNSSNAYRGLVKFGPGAEGARNFTQCDSLLIGDRCGAHTFPYIESKNKS 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISDE +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++
Sbjct: 416 GIIEHEATTSKISDEQMFLCRQRGINPEQAVSMIVNGFCKEVFKELPMEFAVEAGKLLEV 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|254456451|ref|ZP_05069880.1| FeS assembly protein SufB [Candidatus Pelagibacter sp. HTCC7211]
gi|207083453|gb|EDZ60879.1| FeS assembly protein SufB [Candidatus Pelagibacter sp. HTCC7211]
Length = 480
Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats.
Identities = 335/490 (68%), Positives = 403/490 (82%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M ++ ++ ++ YKYGF T+I+ +APKGLNED+I+FIS K EP WMLE+RL
Sbjct: 1 MDNRQKEIENLKD-----YKYGFSTDIENTRAPKGLNEDVIKFISNIKKEPSWMLEFRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
A+ R+ +K+P W + +YP ID+ DLYYY+APKS+ P+SLD++DP+LL TY+KLGIP+
Sbjct: 56 AFERFKQLKEPDWQKPKYPKIDYQDLYYYSAPKSMDDKPKSLDELDPKLLETYKKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+EQ L G+ AVDAVFDSVSV TTF+EEL K G+IF PISEAI HP+LVKKYL +
Sbjct: 116 QEQARLNGI-----AVDAVFDSVSVATTFREELSKLGIIFCPISEAIQNHPELVKKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P D+F+A LNSAVFTDGSF YIP+GV+CPMELSTYFRIN TGQFERTLI+AD+GS
Sbjct: 171 VIPTTDHFFATLNSAVFTDGSFAYIPEGVKCPMELSTYFRINASNTGQFERTLIVADKGS 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA VEL+ALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 231 YVSYLEGCTAPMRDENQLHAANVELIALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G SKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYSIAI+N Q+ D+GTKM+HL
Sbjct: 291 LCKGRNSKISWTQVETGSAITWKYPSCILKGDNSVGEFYSIAITNNHQKADTGTKMIHLG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S+I+SKGISAGFS+ TYRG V + AA+S N+TQCDSLL+GN CGAHT+PYI++K
Sbjct: 351 KNTKSKIISKGISAGFSDMTYRGLVDISPKAANSNNYTQCDSLLMGNKCGAHTVPYIKNK 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS N+ HEATTSKIS+E L YC QRG+ E A+ LIVNGF +EVLQ+LPMEFAVEAQKL
Sbjct: 411 NSESNIAHEATTSKISEEQLHYCQQRGLNAEEAVGLIVNGFCKEVLQQLPMEFAVEAQKL 470
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 471 VGISLEGSVG 480
>gi|56459265|ref|YP_154546.1| cysteine desulfurase activator complex subunit SufB [Idiomarina
loihiensis L2TR]
gi|56178275|gb|AAV80997.1| Cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
Length = 478
Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats.
Identities = 336/482 (69%), Positives = 402/482 (83%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y GF + I+ + P GL+ED+I +SA K EP+WMLEWRL AYR WL M
Sbjct: 3 EQIDQALARKYDAGFISEIESETFPIGLDEDVIARLSAIKGEPEWMLEWRLKAYRTWLKM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP +D+ + YY+APKS P+SLD+VDPELLRTYEKLGIP+ EQE+LAG
Sbjct: 63 EEPDWAHVDYPKVDYQSISYYSAPKSMKDKPKSLDEVDPELLRTYEKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSVVTTF+E+L+++GVIF PISEA+ ++PDLVKKYL TVVP GDNF
Sbjct: 123 -----VAVDAVFDSVSVVTTFREKLEEAGVIFCPISEALHKYPDLVKKYLGTVVPRGDNF 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLI+A+EGS+VSYLEGC
Sbjct: 178 FAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIVAEEGSHVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRGLC-EKNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+HL KNT S I+
Sbjct: 297 ISWTQVETGSAVTWKYPSCILKGDNSVGEFYSVALTRGRQQADTGTKMIHLGKNTKSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN YRG V + GA +RNFT+CDSLLIG+ CGAHT PYIES N + +EH
Sbjct: 357 SKGISAGRSNNAYRGLVRMGPGAEGARNFTECDSLLIGDQCGAHTFPYIESSNPTAIVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ LF C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDDQLFLCRQRGLDPEKAVSMIVNGFCKEVFRELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|317967992|ref|ZP_07969382.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CB0205]
Length = 480
Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats.
Identities = 296/484 (61%), Positives = 375/484 (77%), Gaps = 5/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
V + YKYGF T+I+ +K KGL+ED++R IS+KK+EP ++L++RL AYR+W
Sbjct: 2 SNAQAVGDLVSQPYKYGFVTDIETEKIAKGLSEDVVRLISSKKDEPSFLLDFRLRAYRQW 61
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L M++P WA + YP ID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 62 LQMEEPDWAALGYPPIDYQDVVYYAAPKQQEKKTSLDEVDPKLLETFDKLGIPLSEQKRL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ VAVDAVFDSVS+ TT+KE+L + GV+F ISEA+ E+P+L+++YL TVVP D
Sbjct: 122 S-----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSISEAVKEYPELIERYLGTVVPSND 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLE
Sbjct: 177 NYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP D NQLHAAVVELV LD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG R
Sbjct: 237 GCTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGAR 296
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
SKISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S
Sbjct: 297 SKISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNMQQADTGTKMIHVGPRTRST 356
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSKGISAG S+N+YRG V + A ++N++QCDS+LIG+ A+T PYI S+ +
Sbjct: 357 IVSKGISAGRSSNSYRGLVQIGPKATGAKNYSQCDSMLIGDQAAANTYPYIRSQQPQAAV 416
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LE
Sbjct: 417 EHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLE 476
Query: 486 GSVG 489
GSVG
Sbjct: 477 GSVG 480
>gi|147774138|emb|CAN76788.1| hypothetical protein VITISV_038836 [Vitis vinifera]
Length = 554
Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats.
Identities = 295/487 (60%), Positives = 366/487 (75%), Gaps = 5/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A T DK++KI YK+G+ NI D PKGL+E IR IS +KNEP WMLE+RL +Y
Sbjct: 73 ATSSTDDKLQKILNRDYKWGWFENIDSDAIPKGLSEKTIRMISERKNEPXWMLEFRLKSY 132
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
++L MK+P W+ RYP IDF D+ YY+ PK SLD+ DPELLR ++KLG+P+ EQ
Sbjct: 133 EKFLKMKEPKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLDEADPELLRYFDKLGVPLNEQ 192
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LA VAVDAV DSVS+ TT ++ L+K+GVIF ISEAI E+PDLV+KYL VVP
Sbjct: 193 NRLA-----NVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVRKYLGRVVP 247
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN+YAALNSAVF+DGSF Y+PK +CPM++STYFRIN TGQFERTLI+AD+ S+V
Sbjct: 248 SDDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINALETGQFERTLIVADDRSFVE 307
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP D NQLHAAVVEL + AEIKYSTVQNWY GD +G+GGIYNFVTKRG C
Sbjct: 308 YLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGRGGIYNFVTKRGLCS 367
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSKISWTQ+ETGSAITWKYPS +L G+ + GEFYS+A++N +QQ D+GTKM+H KNT
Sbjct: 368 GARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHKGKNT 427
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
SRI+SKGISAG S N YRG V V A ++RN +QCDS+LIG+N A+T PYI+ KN +
Sbjct: 428 RSRIISKGISAGNSRNCYRGLVQVQSKAXNARNSSQCDSMLIGDNAAANTYPYIQVKNPT 487
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKI ++ LFY QRGI E A+A +++GF ++V +LP EF E +L+ +
Sbjct: 488 ARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCKDVFNELPDEFGAEVNQLMSL 547
Query: 483 SLEGSVG 489
LEGSVG
Sbjct: 548 KLEGSVG 554
>gi|319900398|ref|YP_004160126.1| Iron-regulated ABC transporter membrane component SufB [Bacteroides
helcogenes P 36-108]
gi|319415429|gb|ADV42540.1| Iron-regulated ABC transporter membrane component SufB [Bacteroides
helcogenes P 36-108]
Length = 506
Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats.
Identities = 316/487 (64%), Positives = 389/487 (79%), Gaps = 7/487 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ + + VRKI ++YKYGF T++ + GLNEDI+R IS KK EP+W+LE+RL AYR
Sbjct: 25 KPSNELVRKIAEEKYKYGFSTDVHTEVIECGLNEDIVRLISEKKGEPEWLLEFRLKAYRY 84
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG--PQSLDDVDPELLRTYEKLGIPIREQ 122
WLT++ P WA + P ID+ + YYA P PQS+D+VDPEL++T+ KLGIP+ EQ
Sbjct: 85 WLTLEMPVWAHLHIPEIDYQAISYYADPTKKKKDTPQSMDEVDPELVKTFNKLGIPLEEQ 144
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLV+KYL +VVP
Sbjct: 145 MALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVQKYLGSVVP 199
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+A++ SYVS
Sbjct: 200 YRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVAEDDSYVS 259
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAA+VE+V D AE+KYSTVQNWYPGD++G+GG+YNFVTKRG C+
Sbjct: 260 YLEGCTAPMRDENQLHAAIVEIVVHDRAEVKYSTVQNWYPGDAEGRGGVYNFVTKRGHCK 319
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N QQ D+GTKM+HL +NT
Sbjct: 320 GVDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTNNHQQADTGTKMIHLGRNT 379
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N +
Sbjct: 380 RSTIVSKGISAGQSENSYRGLVRVSAKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNET 439
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS++ +FYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ I
Sbjct: 440 AIVEHEATTSKISEDQIFYCNQRGISTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLAI 499
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 500 SLEGSVG 506
>gi|223936062|ref|ZP_03627976.1| FeS assembly protein SufB [bacterium Ellin514]
gi|223895284|gb|EEF61731.1| FeS assembly protein SufB [bacterium Ellin514]
Length = 482
Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats.
Identities = 306/487 (62%), Positives = 378/487 (77%), Gaps = 6/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ D + + +YKYGF ++I + P GLNED++R IS KKNEP +ML+WRL AYR
Sbjct: 1 MSTATDTIEEFVNKEYKYGFVSDIDTETIPPGLNEDVVRLISKKKNEPQFMLDWRLKAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WLT+K+P+W + YP ID+ YYAAPK SLD+VDPEL +T++KLGI + EQ+
Sbjct: 61 HWLTLKEPNWQKAEYPPIDYQASIYYAAPKPKKTLNSLDEVDPELRKTFDKLGISLDEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
++GV V V TTF+++L K GVIF SEA+ +HPDLV+KY+ +VVP
Sbjct: 121 RISGVAVDAVVDSVS-----VATTFQKDLAKVGVIFCSFSEAVQKHPDLVEKYIGSVVPY 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSF YIPKGVRCPMELSTYFRIN TGQFERTLIIA+EG+YVSY
Sbjct: 176 TDNFFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINTANTGQFERTLIIAEEGAYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVA-LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
LEGCTAP RDENQLHAAVVEL+A +EIKYSTVQNWYPGD +GKGGIYNFVTKRG C+
Sbjct: 236 LEGCTAPMRDENQLHAAVVELIALGKKSEIKYSTVQNWYPGDKEGKGGIYNFVTKRGKCQ 295
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A+ N QQ D+GTKM+H+ KNT
Sbjct: 296 GEGSKISWTQVETGSAITWKYPSVILQGDNSVGEFYSVALVNNRQQADTGTKMIHVGKNT 355
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG N+YRG V + + A ++RNF+QCDSLLIG+ CGAHT PYIE KN++
Sbjct: 356 KSTIISKGISAGKGQNSYRGLVKIMKNAENARNFSQCDSLLIGDKCGAHTFPYIEVKNTT 415
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKI ++ +FYC QRGI + A+ +IVNGF +EV ++LPMEFAVEAQKL+ +
Sbjct: 416 GRIEHEASTSKIGEDQIFYCNQRGISTQDAVNMIVNGFCKEVFRELPMEFAVEAQKLLGV 475
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 476 SLEGSVG 482
>gi|113954469|ref|YP_731677.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CC9311]
gi|113881820|gb|ABI46778.1| FeS assembly protein SufB [Synechococcus sp. CC9311]
Length = 479
Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats.
Identities = 297/483 (61%), Positives = 376/483 (77%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R++ YKYGF T+I+ +K KGL+E+++R ISAKKNEP+++L++RL AYR WL
Sbjct: 2 TSTSTRELVSQPYKYGFVTDIETEKIAKGLSEEVVRLISAKKNEPEFLLDFRLKAYRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
+++P WA + Y ID+ ++ YYAAPK QSLD+VDP+LL T+EKLGIP+ EQ+ L+
Sbjct: 62 KLQEPDWAALGYKEIDYQEIVYYAAPKQQEKKQSLDEVDPKLLDTFEKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F SEA+ EHP+L++KYL +VVP DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVVEHPELIEKYLGSVVPSSDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELV LD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGDRS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNLQQADTGTKMIHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V V A +RN++QCDS+LIG+ A+T PYI S+ +E
Sbjct: 357 VSKGISAGRSSNSYRGLVQVGPNATGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAIE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T ++S++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRMSEDQLFYLQSRGIDFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|116695453|ref|YP_841029.1| cysteine desulfurase activator complex subunit SufB [Ralstonia
eutropha H16]
gi|113529952|emb|CAJ96299.1| iron sulfur cluster assembly protein (SufB) [Ralstonia eutropha
H16]
Length = 482
Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats.
Identities = 316/481 (65%), Positives = 392/481 (81%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
K+ ++ YK+GF T ++ D P GL+ED+IR ISA K EP++MLEWRL A+R WLTM
Sbjct: 7 KLDELISHGYKHGFYTAVETDTVPCGLDEDVIRMISAIKGEPEFMLEWRLKAFRHWLTMS 66
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+P WA + +P ID+ + YYAAP+S GP++L +VDPELLRTYEKLG+P+ E+E+LAG
Sbjct: 67 EPHWATVTHPPIDYQAIAYYAAPRSQKAGPKTLAEVDPELLRTYEKLGVPLHERELLAG- 125
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTFK++L + G+IF SEA+ EHP LV++YL +VVP DNF+
Sbjct: 126 ----VAVDAVFDSVSVATTFKQKLGELGIIFCSFSEAVREHPALVQQYLGSVVPYTDNFF 181
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A+LNSAVF+DGSF YIP GVRCPMELSTYFRIN TGQFERTLIIAD+G+YVSYLEGCT
Sbjct: 182 ASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINASNTGQFERTLIIADQGAYVSYLEGCT 241
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDENQLHAAVVEL+AL++A+IKY+TVQNWYPGD GKGGIYNFVTKRGDCRG RSKI
Sbjct: 242 APMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKDGKGGIYNFVTKRGDCRGARSKI 301
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N +QQ D+GTKM HL +NT S I+S
Sbjct: 302 SWTQVETGSAITWKYPSVILQGDDSVGEFYSVALTNHYQQADTGTKMTHLGRNTRSTILS 361
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG N YRG V + R A +RN++QCDSLL+G+ C AHT PYIE KN++ +EHE
Sbjct: 362 KGISAGHGQNAYRGLVKMARSAVGARNYSQCDSLLLGDKCAAHTFPYIEVKNATGQVEHE 421
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TS+I ++ LFYC RG+ E A+++IVNGF +EV ++LPMEFAVEAQKL+ +SLEGS+
Sbjct: 422 ASTSRIGEDQLFYCQSRGVSAEDAVSMIVNGFCKEVFKELPMEFAVEAQKLLGVSLEGSI 481
Query: 489 G 489
G
Sbjct: 482 G 482
>gi|33863873|ref|NP_895433.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9313]
gi|33635456|emb|CAE21781.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
Length = 480
Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats.
Identities = 295/480 (61%), Positives = 375/480 (78%), Gaps = 5/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
V ++ + YKYGF T+I+ +K PKGL+ED++R IS KKNEP ++L++R+ AYR WL ++
Sbjct: 6 HVGQLVSEPYKYGFVTDIETEKIPKGLDEDVVRLISEKKNEPQFLLDFRIRAYRHWLKLQ 65
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P WA + YP ID+ D+ YYAAPK SL++VDP LL T++KLGIP+ EQ+ L+
Sbjct: 66 TPDWAGLGYPPIDYQDIVYYAAPKQKEKKNSLEEVDPTLLETFDKLGIPLSEQKRLS--- 122
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVS+ TT+KE+L + GV+F I++A+ EHP+LV++YL TVVP DN++A
Sbjct: 123 --NVAVDAVFDSVSIATTYKEKLAEHGVVFCSITDAVNEHPELVRRYLGTVVPSNDNYFA 180
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSFV+IP+GV CPMELS+YFRIN GQFERTLI+A+EG+ VSYLEGCTA
Sbjct: 181 ALNSAVFSDGSFVFIPRGVECPMELSSYFRINSGDIGQFERTLIVAEEGASVSYLEGCTA 240
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P D N LHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG C G RSKIS
Sbjct: 241 PMFDTNTLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGHCCGARSKIS 300
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W+Q+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+HL T S IVSK
Sbjct: 301 WSQVETGSAITWKYPSCILQGADSVGEFYSVALTNHRQQADTGTKMIHLGPRTRSTIVSK 360
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S N+YRG V + A +++N++QCDS+LIG+ GA+T PYI S+ ++EHEA
Sbjct: 361 GISAGHSANSYRGLVQMGPKAVNAKNYSQCDSMLIGDQAGANTYPYIRSQQPDASIEHEA 420
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+T +IS++ LFY RGI EAAI++IV+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 421 STCRISEDQLFYLQSRGIDFEAAISMIVSGFCRDVFSQLPMEFAAEADKLLALKLEGSVG 480
>gi|71897639|ref|ZP_00679884.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
gi|71732542|gb|EAO34595.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
Length = 555
Score = 545 bits (1403), Expect = e-153, Method: Composition-based stats.
Identities = 319/487 (65%), Positives = 385/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++D +Y+ GF T I+ D P GLNE IIR +SAKK+EP+WM EWRL AY
Sbjct: 76 ATPQNAEILERLDR-RYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWRLAAY 134
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 135 RHWLNMPMPEWAKLHIAPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 193
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVS+ TTF++EL + G+IF ISEAI EHPDL+++YL +VVP
Sbjct: 194 ARLAG-----VAVDAVFDSVSLGTTFRKELAEKGIIFCSISEAIQEHPDLIRQYLGSVVP 248
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
V DN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ +E +YVS
Sbjct: 249 VRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVS 308
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVA ++AEIKYSTVQNWYPGD G+GGIYNFVTKR +CR
Sbjct: 309 YLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECR 368
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK+ WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A++ QQ D+GTKM+H+ K T
Sbjct: 369 GARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRT 428
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V + R A +RN TQCDSLLIG CGAHT PYIE K+ +
Sbjct: 429 KSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIGKQCGAHTFPYIEVKHPN 488
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI EE A+++IV+GF ++V ++LPMEFAVEA+KLIDI
Sbjct: 489 ATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLIDI 548
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 549 SLEGSVG 555
>gi|332886377|gb|EGK06621.1| hypothetical protein HMPREF9456_00495 [Dysgonomonas mossii DSM
22836]
Length = 485
Score = 545 bits (1403), Expect = e-153, Method: Composition-based stats.
Identities = 330/487 (67%), Positives = 391/487 (80%), Gaps = 3/487 (0%)
Query: 4 VRETVDKV-RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
++ET DK+ + YKYGF T+I+ + P GLNED++R ISAKKNEPDW+LE+RL AY
Sbjct: 1 MQETQDKILEDVTTADYKYGFVTDIETEVIPIGLNEDVVRLISAKKNEPDWLLEYRLKAY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WLTMK P WA + P ID+ + YYAAPK GP+SLD+VDPELL+T++KLG+P+ E+
Sbjct: 61 RHWLTMKTPEWAHLEIPEIDYQSISYYAAPKKKDGPKSLDEVDPELLKTFDKLGVPLHER 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
EILAGVQT V VSV TTFKE L + G+IF SEA+ EHP+LVKKYL +VVP
Sbjct: 121 EILAGVQTMAVDAVVDS--VSVKTTFKEVLAEKGIIFCAFSEAVQEHPELVKKYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+A++ SYVS
Sbjct: 179 YRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVAEDNSYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAA+VE++ALD AE+KYSTVQNWYPGD +GKGGIYNFVTKRG C+
Sbjct: 239 YLEGCTAPMRDENQLHAAIVEIIALDYAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGICK 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+HL KNT
Sbjct: 299 GKGSKISWTQVETGSAITWKYPSCILAGDDSIGEFYSVALTNHYQQADTGTKMIHLGKNT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
SRIVSKGISAGFS N YRG V V A +RN +QCDSLL+G+ CGAHT PY + N
Sbjct: 359 KSRIVSKGISAGFSQNIYRGLVKVSPKAEGARNHSQCDSLLLGDKCGAHTFPYSDIANPG 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS++ + YC QRGI E A+ LIVNG+ +EV+Q LPMEFAVEAQKL+ I
Sbjct: 419 AIIEHEATTSKISEDQILYCNQRGIGTEEAVGLIVNGYAKEVMQNLPMEFAVEAQKLLQI 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|78213792|ref|YP_382571.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CC9605]
gi|78198251|gb|ABB36016.1| FeS assembly protein SufB [Synechococcus sp. CC9605]
Length = 479
Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats.
Identities = 297/483 (61%), Positives = 373/483 (77%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+E+++R ISAKK EPD++L++RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIAKGLSEEVVRLISAKKEEPDFLLQFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + YP ID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYPKIDYQDIIYYAAPKQQEKKASLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F SEA+ EHP+L+++YL TVV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPELIERYLGTVVSSNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPK V CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKSVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGDRS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADTGTKMVHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ +E
Sbjct: 357 VSKGISAGRSSNSYRGLVQMGPNAKGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAIE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|34540102|ref|NP_904581.1| cysteine desulfurase activator complex subunit SufB [Porphyromonas
gingivalis W83]
gi|34396413|gb|AAQ65480.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 481
Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats.
Identities = 326/486 (67%), Positives = 398/486 (81%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++E + + ++ +YKYGF T+I+ + +GL+ED +R ISAKK EP+W+LE+RL AYR
Sbjct: 1 MQENNNILDEVTGSEYKYGFVTDIETETIGRGLSEDTVRLISAKKEEPEWLLEFRLNAYR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
WL+MK+P WA + P ID+ D+ YYAAPK GP+SLD+VDPELL+T++KLGIP+ EQ+
Sbjct: 61 HWLSMKEPDWAHLNIPPIDYQDIIYYAAPKKKKGPKSLDEVDPELLKTFDKLGIPLEEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
IL+G +AVDAV DSVSV TTFKE+L + G+IF SEA+ + PDLVKKYL TVV
Sbjct: 121 ILSG-----MAVDAVMDSVSVKTTFKEKLAEKGIIFCSFSEAVKDFPDLVKKYLGTVVSS 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADE SYVSY
Sbjct: 176 KDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADEDSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQRDENQLHAA+VE++A NAE+KYSTVQNWYPGD +GKGGIYNFVTKRG C+G
Sbjct: 236 LEGCTAPQRDENQLHAAIVEIIAETNAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGVCKG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N FQQ D+GTKM+HL KNT
Sbjct: 296 DNSKISWTQVETGSAITWKYPSCVLRGDNSIAEFYSVAVTNNFQQADTGTKMIHLGKNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S N+YRG V + + A ++RN +QCDSLL+ ++CGAHT PY + +N +
Sbjct: 356 SRIVSKGISAGSSQNSYRGLVKISKNAVNARNHSQCDSLLLSDHCGAHTYPYADVQNDTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS+E +FYC QRGI E A+ LIVNG+ +EV+ KL MEFAVEAQKL+ IS
Sbjct: 416 IIEHEATTSKISEEQIFYCNQRGIGTEEAVGLIVNGYAKEVMNKLLMEFAVEAQKLLSIS 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|307824108|ref|ZP_07654335.1| FeS assembly protein SufB [Methylobacter tundripaludum SV96]
gi|307734892|gb|EFO05742.1| FeS assembly protein SufB [Methylobacter tundripaludum SV96]
Length = 482
Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats.
Identities = 318/490 (64%), Positives = 394/490 (80%), Gaps = 9/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A + ++ + +YK GF T ++ D P GL+E++I +S KNEP++MLE+RL
Sbjct: 1 MSASEQE---IKNLIGKEYKQGFVTELETDTFPPGLDEEVIHRLSKVKNEPEFMLEYRLK 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
A+R W TMK P WA +++ ID+ + YY+APK GP+SLD++DP++L Y+KLGIP+
Sbjct: 58 AFRHWQTMKTPKWAFVKFDPIDYQAISYYSAPKRKEDGPKSLDEIDPQVLEAYKKLGIPL 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE LAG VAVDAVFDSVSV TTFK +L ++GVIF PISEA+ EHP+L+K+YL +
Sbjct: 118 DEQERLAG-----VAVDAVFDSVSVATTFKGKLHEAGVIFCPISEALREHPELIKQYLGS 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++AALN+AVFTDGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIADEGS
Sbjct: 173 VVPHTDNYFAALNAAVFTDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIADEGS 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+VSYLEGCTAP RDENQLHAAVVEL+A+ +A IKYSTVQNWYPGD G GGIYNFVTKR
Sbjct: 233 HVSYLEGCTAPMRDENQLHAAVVELIAMKDAVIKYSTVQNWYPGDKNGLGGIYNFVTKRA 292
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG SK+SWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 293 DCRGENSKVSWTQVETGSAITWKYPSCILTGDNSTGEFYSVALTNNYQQADTGTKMIHIG 352
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT+S I+SKGISAG + NTYRG V V + A ++RN+TQCDSLLIG+ CGAHT PY+E K
Sbjct: 353 KNTSSTIISKGISAGRAQNTYRGLVKVLKSAENARNYTQCDSLLIGDKCGAHTFPYVEVK 412
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
S +EHEATTSKIS++ LF+C QRG+ E A+++IVNGF +EV ++LPMEFAVEAQ L
Sbjct: 413 QPSAQVEHEATTSKISEDQLFFCQQRGLSAEDAVSMIVNGFCKEVFRELPMEFAVEAQAL 472
Query: 480 IDISLEGSVG 489
+ +SLEGSVG
Sbjct: 473 LGLSLEGSVG 482
>gi|255534219|ref|YP_003094590.1| cysteine desulfurase activator complex subunit SufB
[Flavobacteriaceae bacterium 3519-10]
gi|255340415|gb|ACU06528.1| Iron-sulfur cluster assembly protein SufB [Flavobacteriaceae
bacterium 3519-10]
Length = 482
Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats.
Identities = 331/489 (67%), Positives = 399/489 (81%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E +V ++ +Y+YG+ET+I+ D+ P GLNE I+R ISAKKNEP+WM EWRL
Sbjct: 1 MSKYTEDDLRV-DLENQKYEYGWETDIEYDEFPIGLNEGIVRMISAKKNEPEWMTEWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R WL M++P+WA ++Y DF + YYAAPK SLD+VDPELL+T+EKLGI I
Sbjct: 60 AFRIWLKMEEPTWANVKYEKPDFQGITYYAAPKKKPELASLDEVDPELLKTFEKLGINIE 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ L+G VAVD V DSVSV TTF+E LK+ G+IF ISEAI ++PDLV+KY+ V
Sbjct: 120 EQKRLSG-----VAVDIVIDSVSVKTTFQETLKEKGIIFCAISEAIRDYPDLVRKYIGKV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP GDNFYAALNSAVF+DGSF YIPKGV+CPMELSTYFRIN+ G+GQFERTL+IADEGSY
Sbjct: 175 VPRGDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQSGSGQFERTLLIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+A+D+AEIKYSTVQNW+PGD+ GKGG++NFVTKRG
Sbjct: 235 VSYLEGCTAPARDENQLHAAVVELIAMDDAEIKYSTVQNWFPGDASGKGGVFNFVTKRGI 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C R+KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N Q D+GTKM+H+ K
Sbjct: 295 C-ETRAKISWTQVETGSAVTWKYPSCILKGDHSIGEFYSIAVTNNHQYADTGTKMIHIGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG SNN+YRG V V A +RNF+QCDSLL+GN+CGAHT PYIE K+
Sbjct: 354 NTRSTIISKGISAGKSNNSYRGLVKVMPSAKGARNFSQCDSLLMGNDCGAHTFPYIEIKD 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ LEHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFA+EAQKL+
Sbjct: 414 PTAQLEHEATTSKIGEDQIFYCNQRGINTEKAIALIVNGFGKEVLNKLPMEFAIEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|71083442|ref|YP_266161.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062555|gb|AAZ21558.1| FeS assembly protein SufB [Candidatus Pelagibacter ubique HTCC1062]
Length = 480
Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats.
Identities = 341/490 (69%), Positives = 410/490 (83%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A + ++K++ YKYGF T+I+ +APKGLNE++I+FIS K EP WML+WRL
Sbjct: 1 MDAREKEIEKLKD-----YKYGFSTDIENTRAPKGLNEEVIKFISNIKKEPQWMLDWRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
A+ R +K+P+W + +YP ID+ DLYYY+APKS+ P+SLD++DP+LL TY KLGIP+
Sbjct: 56 AFERLKQLKEPNWQKPKYPKIDYQDLYYYSAPKSMDDKPKSLDELDPKLLETYNKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+EQ L G+ AVDAVFDSVSV TTFK EL K G+IF +SEAI +HP+LVKKYL +
Sbjct: 116 QEQARLNGI-----AVDAVFDSVSVATTFKGELNKKGIIFCSMSEAIQDHPELVKKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P+ D+++A LNSAVFTDGSFVYIP+GVRCPMELSTYFRIN TGQFERTLIIAD+GS
Sbjct: 171 VIPISDHYFATLNSAVFTDGSFVYIPEGVRCPMELSTYFRINATETGQFERTLIIADKGS 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA VELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 231 YVSYLEGCTAPMRDENQLHAANVELVALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIAI+N Q+ D+GTKM+HL
Sbjct: 291 LCKGKNSKISWTQVETGSAITWKYPSCILMGDNSVGEFYSIAITNNHQKADTGTKMIHLG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S+I+SKGISAGF++NTYRG V + + A ++RNFTQCDSLL+GN CGAHT+PYI++K
Sbjct: 351 KNTKSKIISKGISAGFADNTYRGLVDISKNADNARNFTQCDSLLMGNKCGAHTVPYIKNK 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NSS N+EHEATTSKISDE LFYC QRG+ +E A++LIVNGF +EVLQ+LPMEFAVEAQKL
Sbjct: 411 NSSSNIEHEATTSKISDEQLFYCNQRGLNQEEAVSLIVNGFCKEVLQQLPMEFAVEAQKL 470
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 471 VGISLEGSVG 480
>gi|91762135|ref|ZP_01264100.1| FeS assembly protein SufB [Candidatus Pelagibacter ubique HTCC1002]
gi|91717937|gb|EAS84587.1| FeS assembly protein SufB [Candidatus Pelagibacter ubique HTCC1002]
Length = 480
Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats.
Identities = 341/490 (69%), Positives = 410/490 (83%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A + ++K++ YKYGF T+I+ +APKGLNE++I+FIS K EP WML+WRL
Sbjct: 1 MDAREKEIEKLKD-----YKYGFSTDIENTRAPKGLNEEVIKFISNIKKEPQWMLDWRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
A+ R +K+P+W + +YP ID+ DLYYY+APKS+ P+SLD++DP+LL TY KLGIP+
Sbjct: 56 AFERLKQLKEPNWQKPKYPKIDYQDLYYYSAPKSMDDKPKSLDELDPKLLETYNKLGIPL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+EQ L G+ AVDAVFDSVSV TTFK EL K G+IF +SEAI +HP+LVKKYL +
Sbjct: 116 QEQARLNGI-----AVDAVFDSVSVATTFKGELNKKGIIFCSMSEAIQDHPELVKKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P+ D+++A LNSAVFTDGSFVYIP+GVRCPMELSTYFRIN TGQFERTLIIAD+GS
Sbjct: 171 VIPISDHYFATLNSAVFTDGSFVYIPEGVRCPMELSTYFRINATETGQFERTLIIADKGS 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA VELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 231 YVSYLEGCTAPMRDENQLHAANVELVALDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIAI+N Q+ D+GTKM+HL
Sbjct: 291 LCKGKNSKISWTQVETGSAITWKYPSCILMGDNSVGEFYSIAITNNHQKADTGTKMIHLG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S+I+SKGISAGF++NTYRG V + + A ++RNFTQCDSLL+GN CGAHT+PYI++K
Sbjct: 351 KNTKSKIISKGISAGFADNTYRGLVDIAKNADNARNFTQCDSLLMGNKCGAHTVPYIKNK 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NSS N+EHEATTSKISDE LFYC QRG+ +E A++LIVNGF +EVLQ+LPMEFAVEAQKL
Sbjct: 411 NSSSNIEHEATTSKISDEQLFYCNQRGLNQEEAVSLIVNGFCKEVLQQLPMEFAVEAQKL 470
Query: 480 IDISLEGSVG 489
+ ISLEGSVG
Sbjct: 471 VGISLEGSVG 480
>gi|268317572|ref|YP_003291291.1| FeS assembly protein SufB [Rhodothermus marinus DSM 4252]
gi|262335106|gb|ACY48903.1| FeS assembly protein SufB [Rhodothermus marinus DSM 4252]
Length = 486
Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats.
Identities = 324/485 (66%), Positives = 395/485 (81%), Gaps = 11/485 (2%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM-- 68
+ +I +YKYGFET+I+V+KAP GL+E++I +IS ++ EPDWM EWRL A+R ++++
Sbjct: 7 LHQIAQSEYKYGFETDIEVEKAPPGLSEEVIHYISDRRGEPDWMREWRLRAFRYFMSLLE 66
Query: 69 ----KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
P WA ++YP IDF + YYAAP+ +SLD+VDP++L T+ KLGIP+ EQ
Sbjct: 67 RYEETYPRWAHLKYPDIDFQAISYYAAPQRKPRYKSLDEVDPKILETFRKLGIPLDEQMR 126
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG VAVDAV DSVSV TTFKEEL K G+IF + EAI +P+LVKKYL +VVP
Sbjct: 127 LAG-----VAVDAVMDSVSVATTFKEELAKHGIIFCSMGEAIENYPELVKKYLGSVVPYT 181
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DNF+AALNSAVF+DGSFVY+PKGVRCPMELSTYFRIN GTGQFERTLIIADEGSYVSYL
Sbjct: 182 DNFFAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINTAGTGQFERTLIIADEGSYVSYL 241
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP RDE+QLHAAVVEL+AL +AEIKYSTVQNWYPGD++GKGG+YNFVTKRG C G
Sbjct: 242 EGCTAPMRDEHQLHAAVVELIALKDAEIKYSTVQNWYPGDAEGKGGVYNFVTKRGICLGE 301
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SKISWTQLETGSAITWKYPS +L+G+ S GEFYS+A + G+QQ D+GTKM+HL +NT S
Sbjct: 302 NSKISWTQLETGSAITWKYPSVILKGDNSVGEFYSVAFTKGYQQADTGTKMIHLGRNTRS 361
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I+SKGI+AG+SNN+YRG V V R A ++RNF+QCDS+L+G+ CGAHT PYIE +N +
Sbjct: 362 TIISKGIAAGYSNNSYRGLVKVARTAENARNFSQCDSMLLGDKCGAHTFPYIEIENPTAR 421
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+EHEATTSKI ++ +FYC QRG+ EE AI LIVNGF +EVL +LPMEFA+EAQKL+ I L
Sbjct: 422 VEHEATTSKIGEDQIFYCQQRGLSEETAIKLIVNGFCKEVLAQLPMEFAMEAQKLLAIEL 481
Query: 485 EGSVG 489
EGSVG
Sbjct: 482 EGSVG 486
>gi|298373683|ref|ZP_06983672.1| FeS assembly protein SufB [Bacteroidetes oral taxon 274 str. F0058]
gi|298274735|gb|EFI16287.1| FeS assembly protein SufB [Bacteroidetes oral taxon 274 str. F0058]
Length = 478
Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats.
Identities = 313/482 (64%), Positives = 386/482 (80%), Gaps = 6/482 (1%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ ++YKYGF T+++ + P GLNED++R IS KKNEP+W+L++RL A+ W
Sbjct: 3 KQTIEDFTSNEYKYGFSTDVETEVIPIGLNEDVVRLISKKKNEPEWLLDFRLKAFAHWQK 62
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+WA++ P ID+ + YYAAP+ P+SLD+VD ELL+T++KLG+P+ EQ++L G
Sbjct: 63 STMPTWAKLNIPPIDYQAISYYAAPR-KNSPKSLDEVDEELLKTFDKLGVPLHEQKMLTG 121
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+AVDAV DSVSV TT+K+ L + G+IF ISEA+ +PDL+K+YL TVVP DN+
Sbjct: 122 -----MAVDAVMDSVSVKTTYKDTLAEKGIIFCSISEAVENYPDLIKQYLGTVVPYTDNY 176
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+A+LNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADE SYVSYLEGC
Sbjct: 177 FASLNSAVFSDGSFVYIPKGVRCPMELSTYFRINAINTGQFERTLIVADEDSYVSYLEGC 236
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAA+VE+V LDNAE+KYSTVQNWYPGD G GGIYNFVTKR CRG +K
Sbjct: 237 TAPIRDENQLHAAIVEIVILDNAEVKYSTVQNWYPGDKNGNGGIYNFVTKRAICRGDNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPSC+L+G S GEF+SIA++N +QQ D+GTKM+HL KNT SRIV
Sbjct: 297 ISWTQVETGSAITWKYPSCILKGNNSSGEFFSIAVTNNYQQADTGTKMIHLGKNTKSRIV 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S N+YRG V + + +RNF+QCDSLL+ + CGAHT PY+ S+N S +EH
Sbjct: 357 SKGISAGKSQNSYRGLVHIAKDTGSARNFSQCDSLLLSSECGAHTFPYMNSQNPSAVIEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKI++E LFYC QRGIP E A+ALI+NG+ +EVL KLPMEFAVEAQKL+ ISLEGS
Sbjct: 417 EATTSKINEEQLFYCNQRGIPTEDAVALIINGYAKEVLNKLPMEFAVEAQKLLSISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|194364779|ref|YP_002027389.1| cysteine desulfurase activator complex subunit SufB
[Stenotrophomonas maltophilia R551-3]
gi|194347583|gb|ACF50706.1| FeS assembly protein SufB [Stenotrophomonas maltophilia R551-3]
Length = 491
Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats.
Identities = 320/499 (64%), Positives = 389/499 (77%), Gaps = 18/499 (3%)
Query: 1 MVAVRETVDKVRKIDV----------DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNE 50
M ET++ V D +Y GF T+I+ D P GL+ED IR +SAKK E
Sbjct: 1 MA--TETIENVASDDTPNREIHEQLGRKYSAGFITDIESDSLPAGLDEDTIRALSAKKEE 58
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+WM +WRL AYR +LTM P+WA+++ ID L YY+APK SLDDV ELL
Sbjct: 59 PEWMTQWRLDAYRHFLTMPMPNWAKLQISPIDLQALSYYSAPKG-PKYASLDDVPKELLD 117
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
TY+KLG+P+ E+ LAG VAVDAVFDSVSV TTF++EL + G++F +SEAI EHP
Sbjct: 118 TYDKLGVPLHERAKLAG-----VAVDAVFDSVSVGTTFRKELAEKGIVFCSMSEAIKEHP 172
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LVK+YL TVVPVGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFER
Sbjct: 173 ELVKQYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFER 232
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLII ++ +YVSYLEGCTAP RDENQLHAAVVELVAL++AEIKYSTVQNWYPGD G GG
Sbjct: 233 TLIICEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQNWYPGDENGVGG 292
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
IYNFVTKR +CRG RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D
Sbjct: 293 IYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQAD 352
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+GTKM+H+ K T S+I+SKGISAG NTYRG V V R A +RN+TQCDSLLIG CGA
Sbjct: 353 TGTKMIHVGKRTKSKIISKGISAGRGQNTYRGLVRVDRNADGARNYTQCDSLLIGKQCGA 412
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT PYIE KN +EHEATTSKISD+ LFYC RGI +E A+++IV+GF ++V ++LPM
Sbjct: 413 HTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSMIVDGFCKQVFRELPM 472
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFAVEA+KL+++SLEGSVG
Sbjct: 473 EFAVEAKKLLEVSLEGSVG 491
>gi|119476388|ref|ZP_01616739.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
gi|119450252|gb|EAW31487.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
Length = 478
Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats.
Identities = 327/482 (67%), Positives = 399/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y+ GF ++I+ + GL+ED+IR ISA K+EPDWMLEWRL A++ W M
Sbjct: 3 EQIDQALEREYEAGFVSDIESETFAPGLDEDVIRRISAMKSEPDWMLEWRLKAFKTWQQM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + Y IDF + YY+APKS+ P+SLD+VDPELL TYEKLGIP+ EQ++LAG
Sbjct: 63 EEPEWAHVDYQKIDFQAISYYSAPKSMADKPKSLDEVDPELLATYEKLGIPLLEQQMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSVVTTF+E+L ++GVIF PISEA+ E+P+LVKKYL +VVP DN+
Sbjct: 123 -----VAVDAVFDSVSVVTTFREKLWEAGVIFCPISEAVQEYPELVKKYLGSVVPQRDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALN AVFTDGSFVYIPKG RCPMELSTYFRINE+ TGQFERTLIIADEGS+VSYLEGC
Sbjct: 178 FAALNCAVFTDGSFVYIPKGTRCPMELSTYFRINEQNTGQFERTLIIADEGSHVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKR C +K
Sbjct: 238 TAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRAVCH-TNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+SWTQ+ETGSA+TWKYPSC+LRG+ S GEFYS+A++ G QQ D+GTKM+H+ KNT S I+
Sbjct: 297 VSWTQVETGSAVTWKYPSCILRGDNSIGEFYSVALTRGMQQADTGTKMIHMGKNTRSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN+YRG V + A +RNFTQCDSLLIG+ CGAHT PY+E+KN + +EH
Sbjct: 357 SKGISAGRSNNSYRGLVRMGPRADGARNFTQCDSLLIGDQCGAHTFPYVETKNPTAIVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ +F C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDDQMFLCQQRGLDAEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|161830538|ref|YP_001597202.1| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii RSA 331]
gi|165924047|ref|ZP_02219879.1| FeS assembly protein SufB [Coxiella burnetii RSA 334]
gi|161762405|gb|ABX78047.1| FeS assembly protein SufB [Coxiella burnetii RSA 331]
gi|165916506|gb|EDR35110.1| FeS assembly protein SufB [Coxiella burnetii RSA 334]
Length = 480
Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats.
Identities = 330/479 (68%), Positives = 399/479 (83%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ I Y++GF T+I+ D GLNE++IR ISAKKNEP++ML+WRL AYR W+T++
Sbjct: 7 LETIVNKTYEHGFITDIETDVIAPGLNEEVIRLISAKKNEPNFMLDWRLKAYRHWVTLEA 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA +R+ ID+ + YYAAPKS P+SL++VDP+LL TY KLGIP+ EQ+ LAG
Sbjct: 67 PQWAHVRFNPIDYQAISYYAAPKSKKKPKSLEEVDPKLLETYTKLGIPLYEQQRLAG--- 123
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVSV TTFKE+L ++GVIF SEA+ +HP+LV+KYL +VVP GDNF+A
Sbjct: 124 --VAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPELVEKYLGSVVPYGDNFFAT 181
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGCTAP
Sbjct: 182 LNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIADEGSYVSYLEGCTAP 241
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
QRDENQLHAAVVELVALDNA+I+Y+TVQNWYPGD +GKGGIYNFVTKRG CRG+ SKISW
Sbjct: 242 QRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGIYNFVTKRGACRGVNSKISW 301
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ KNT S I+SKG
Sbjct: 302 TQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADTGTKMIHIGKNTRSTIISKG 361
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG N+YRG V V A ++RN++QCDSLL+GN CGAHT PY+E KN + +EHEAT
Sbjct: 362 ISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAHTFPYMEIKNKTARVEHEAT 421
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFYC QRGI EE A+++IVNGF ++V QKLPMEFAVEAQKL+++SLEG+VG
Sbjct: 422 TSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPMEFAVEAQKLMEVSLEGAVG 480
>gi|87118504|ref|ZP_01074403.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
gi|86166138|gb|EAQ67404.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
Length = 478
Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats.
Identities = 331/482 (68%), Positives = 399/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D++ K +Y+ GF ++++ D GL+E++IR IS KNEP+WMLE RL A++ W M
Sbjct: 3 DQIDKALEREYEAGFVSDVESDTFEPGLDENVIRRISTMKNEPEWMLEARLKAFKVWQEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + Y IDF + Y++APKS P+SLD+VDPEL+RTYEKLGIP+ EQ++LAG
Sbjct: 63 EEPDWAHVDYEKIDFQAISYFSAPKSMKDKPKSLDEVDPELIRTYEKLGIPLIEQQMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSVVTTF+E+L ++GVIF PISEAI HP+LVKKYL +VVP DN+
Sbjct: 123 -----VAVDAVFDSVSVVTTFREKLSEAGVIFCPISEAIQNHPELVKKYLGSVVPTKDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALN AVFTDGSFVYIPKG RCPMELSTYFRINE+ TGQFERTLIIADEGS+VSYLEGC
Sbjct: 178 YAALNCAVFTDGSFVYIPKGTRCPMELSTYFRINEQNTGQFERTLIIADEGSHVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRGICH-TNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+HL KNT S I+
Sbjct: 297 ISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGAQQADTGTKMIHLGKNTKSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN+YRG V ++ GA +RNFTQCDSLLIG+ CGAHT PY+ES+N S +EH
Sbjct: 357 SKGISAGRSNNSYRGLVRMNPGADGARNFTQCDSLLIGDQCGAHTFPYVESRNPSAIVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ +F C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDDQMFLCQQRGLDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|318040529|ref|ZP_07972485.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CB0101]
Length = 480
Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats.
Identities = 298/484 (61%), Positives = 374/484 (77%), Gaps = 5/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
V + YKYGF T+I+ +K KGL+ED++R IS+KK EP ++LE+RL AY++W
Sbjct: 2 SNAQAVGDLVSQPYKYGFVTDIETEKIAKGLSEDVVRLISSKKEEPAFLLEFRLRAYKQW 61
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L M +P WA + YP ID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 62 LQMSEPDWAALGYPPIDYQDVVYYAAPKHQQKKASLDEVDPKLLETFDKLGIPLSEQKRL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ VAVDAVFDSVS+ TT+KE+L + GVIF ISEA+ EHP+L+++Y+ TVVP D
Sbjct: 122 S-----NVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAVKEHPELIERYIGTVVPSND 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLE
Sbjct: 177 NYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG R
Sbjct: 237 GCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGDR 296
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
SKISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ + S
Sbjct: 297 SKISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNKQQADTGTKMIHVGPRSRST 356
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSKGISAG S N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ ++
Sbjct: 357 IVSKGISAGRSANSYRGLVQIGPKAVGARNYSQCDSMLIGDQAAANTYPYIRSQQPQASV 416
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LE
Sbjct: 417 EHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLE 476
Query: 486 GSVG 489
GSVG
Sbjct: 477 GSVG 480
>gi|209364077|ref|YP_001424795.2| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii Dugway 5J108-111]
gi|215919169|ref|NP_820349.2| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii RSA 493]
gi|206584053|gb|AAO90863.2| ABC transporter-associated protein [Coxiella burnetii RSA 493]
gi|207082010|gb|ABS78228.2| ABC transporter-associated protein [Coxiella burnetii Dugway
5J108-111]
Length = 484
Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats.
Identities = 330/479 (68%), Positives = 399/479 (83%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ I Y++GF T+I+ D GLNE++IR ISAKKNEP++ML+WRL AYR W+T++
Sbjct: 11 LETIVNKTYEHGFITDIETDVIAPGLNEEVIRLISAKKNEPNFMLDWRLKAYRHWVTLEA 70
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA +R+ ID+ + YYAAPKS P+SL++VDP+LL TY KLGIP+ EQ+ LAG
Sbjct: 71 PQWAHVRFNPIDYQAISYYAAPKSKKKPKSLEEVDPKLLETYTKLGIPLYEQQRLAG--- 127
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVSV TTFKE+L ++GVIF SEA+ +HP+LV+KYL +VVP GDNF+A
Sbjct: 128 --VAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPELVEKYLGSVVPYGDNFFAT 185
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGCTAP
Sbjct: 186 LNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIADEGSYVSYLEGCTAP 245
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
QRDENQLHAAVVELVALDNA+I+Y+TVQNWYPGD +GKGGIYNFVTKRG CRG+ SKISW
Sbjct: 246 QRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGIYNFVTKRGACRGVNSKISW 305
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ KNT S I+SKG
Sbjct: 306 TQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADTGTKMIHIGKNTRSTIISKG 365
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG N+YRG V V A ++RN++QCDSLL+GN CGAHT PY+E KN + +EHEAT
Sbjct: 366 ISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAHTFPYMEIKNKTARVEHEAT 425
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFYC QRGI EE A+++IVNGF ++V QKLPMEFAVEAQKL+++SLEG+VG
Sbjct: 426 TSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPMEFAVEAQKLMEVSLEGAVG 484
>gi|254786628|ref|YP_003074057.1| cysteine desulfurase activator complex subunit SufB [Teredinibacter
turnerae T7901]
gi|237684992|gb|ACR12256.1| FeS assembly protein SufB [Teredinibacter turnerae T7901]
Length = 479
Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats.
Identities = 331/482 (68%), Positives = 399/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y GF T+I+ D P GL+ED+IRFIS+KKNEP WML+WRL AY WL M
Sbjct: 4 EQIDHLIKKEYAAGFVTDIESDTLPPGLDEDVIRFISSKKNEPQWMLDWRLKAYHAWLDM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP IDF+++ Y++APKS+ P+SLD+VDP+LL TY KLGIP+ EQ LAG
Sbjct: 64 QEPEWAHVHYPKIDFNEVSYFSAPKSMADKPKSLDEVDPQLLETYNKLGIPLHEQAALAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTF+E LK++GVIF ISEA+ E+P+LV+KYL +VVP DNF
Sbjct: 124 -----VAVDAVFDSVSVGTTFRENLKEAGVIFCSISEAVHEYPELVQKYLGSVVPQKDNF 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALN AVF+DGSFVYIPKGVRCPMELSTYFRINE TGQFERTLIIADEGS VSYLEGC
Sbjct: 179 YAALNCAVFSDGSFVYIPKGVRCPMELSTYFRINESKTGQFERTLIIADEGSQVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALDNA IKYSTVQNWYPGD QG+GGIYNFVTKRG S+
Sbjct: 239 TAPMRDENQLHAAVVELVALDNAYIKYSTVQNWYPGDEQGRGGIYNFVTKRGVAH-TNSR 297
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGS++TWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+HL KNT S I+
Sbjct: 298 ISWTQVETGSSVTWKYPSCVLKGDNSVGEFYSVALTNNYQQADTGTKMIHLGKNTRSTII 357
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S+N YRG V ++ GA+ +RN+TQCDSLLIG+ C AHT PYIESKN S +EH
Sbjct: 358 SKGISAGKSSNAYRGLVRMNPGASGARNYTQCDSLLIGDKCAAHTFPYIESKNPSAVVEH 417
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ L+ C QRGI EE A+++IVNGF +EV ++LPMEFAVEA KL+++SLEGS
Sbjct: 418 EATTSKVSDDQLYLCKQRGIDEEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGS 477
Query: 488 VG 489
VG
Sbjct: 478 VG 479
>gi|78183983|ref|YP_376418.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. CC9902]
gi|78168277|gb|ABB25374.1| Iron-regulated ABC transporter membrane component SufB
[Synechococcus sp. CC9902]
Length = 479
Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats.
Identities = 293/483 (60%), Positives = 373/483 (77%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+E+++R IS+KK+EP+++L +RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIDKGLSEEVVRLISSKKDEPEFLLNFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + Y ID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYEPIDYQDIIYYAAPKQQAKKSSLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F +EA+ +HP+L++KYL +VV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFTEAVKDHPELIEKYLGSVVASNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELV LD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGARS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADTGTKMIHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + GA +RN++QCDS+LIG+ A+T PYI S+ +E
Sbjct: 357 VSKGISAGRSSNSYRGLVQMSPGAKGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAIE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|284929293|ref|YP_003421815.1| Iron-regulated ABC transporter membrane component SufB
[cyanobacterium UCYN-A]
gi|284809737|gb|ADB95434.1| Iron-regulated ABC transporter membrane component SufB
[cyanobacterium UCYN-A]
Length = 480
Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats.
Identities = 304/490 (62%), Positives = 388/490 (79%), Gaps = 11/490 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A V+ + YKYGF T+I+ D P GLNE+++R ISAKK+EPD+ML++RL
Sbjct: 1 MNAT-----TVKNLVNQPYKYGFVTDIESDTIPCGLNEEVVRLISAKKDEPDFMLDFRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
A+++W M +PSWA + YP ID+ ++ YYAAPK +LD+VDP L+ T+ KLGI +
Sbjct: 56 AFKQWQKMVEPSWAHVTYPKIDYQNIIYYAAPKQKKEKLNNLDEVDPALIETFNKLGISL 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVD +FDSVS+VTTFKE+L +SGVIF ISEA+ +P+LVKKYL +
Sbjct: 116 SEQKRLS-----NVAVDVIFDSVSIVTTFKEKLSESGVIFCSISEALKLYPELVKKYLGS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P+ DNF++ALNSAVF+DGSF +IPKGV+CPMELSTYFRIN +GQFERTLI+A+EG+
Sbjct: 171 VIPITDNFFSALNSAVFSDGSFAFIPKGVKCPMELSTYFRINNGSSGQFERTLIVAEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAP D NQLHAAVVELVALDNA IKYSTVQNWY GD +GKGGIYNFVTKRG
Sbjct: 231 SVSYLEGCTAPMFDTNQLHAAVVELVALDNASIKYSTVQNWYAGDEKGKGGIYNFVTKRG 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G+ SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYSIA++N QQ D+GTKM+H+
Sbjct: 291 LCKGVNSKISWTQVETGSAITWKYPSCVLLGDNSIGEFYSIALTNNKQQADTGTKMIHIG 350
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+NT S I+SKGISAG S N+YRG V ++ A +RN++QCDS+LIG+N A+T PYI++
Sbjct: 351 ENTRSTIISKGISAGNSKNSYRGLVKMNPKAKGARNYSQCDSMLIGDNAEANTFPYIQAN 410
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N++ +EHEA+TSKI ++ LFY QRGIPEE A+++IV+GF ++VL +LPMEFA EA KL
Sbjct: 411 NNTTKVEHEASTSKIGEDQLFYFAQRGIPEEDAVSIIVSGFCKDVLNELPMEFASEADKL 470
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 471 LSLKLEGSVG 480
>gi|212212265|ref|YP_002303201.1| cysteine desulfurase activator complex subunit SufB [Coxiella
burnetii CbuG_Q212]
gi|212010675|gb|ACJ18056.1| ABC transporter-associated protein [Coxiella burnetii CbuG_Q212]
Length = 484
Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats.
Identities = 330/479 (68%), Positives = 399/479 (83%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ I Y++GF T+I+ D GLNE++IR ISAKKNEP++ML+WRL AYR W+T++
Sbjct: 11 LETIVNKTYEHGFITDIETDVVAPGLNEEVIRLISAKKNEPNFMLDWRLKAYRHWVTLEA 70
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA +R+ ID+ + YYAAPKS P+SL++VDP+LL TY KLGIP+ EQ+ LAG
Sbjct: 71 PQWAHVRFNPIDYQAISYYAAPKSKKKPKSLEEVDPKLLETYTKLGIPLYEQQRLAG--- 127
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVSV TTFKE+L ++GVIF SEA+ +HP+LV+KYL +VVP GDNF+A
Sbjct: 128 --VAVDAVFDSVSVATTFKEKLAEAGVIFCSFSEAVQKHPELVEKYLGSVVPYGDNFFAT 185
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGCTAP
Sbjct: 186 LNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIIADEGSYVSYLEGCTAP 245
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
QRDENQLHAAVVELVALDNA+I+Y+TVQNWYPGD +GKGGIYNFVTKRG CRG+ SKISW
Sbjct: 246 QRDENQLHAAVVELVALDNAQIRYATVQNWYPGDEEGKGGIYNFVTKRGACRGVNSKISW 305
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N FQQ D+GTKM+H+ KNT S I+SKG
Sbjct: 306 TQIETGSAITWKYPSVILKGDNSVGEFYSVALTNNFQQADTGTKMIHIGKNTRSTIISKG 365
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG N+YRG V V A ++RN++QCDSLL+GN CGAHT PY+E KN + +EHEAT
Sbjct: 366 ISAGRGQNSYRGLVRVLPTAENARNYSQCDSLLLGNRCGAHTFPYMEIKNKTARVEHEAT 425
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFYC QRGI EE A+++IVNGF ++V QKLPMEFAVEAQKL+++SLEG+VG
Sbjct: 426 TSKIGEDQLFYCRQRGITEEDAVSMIVNGFCKQVFQKLPMEFAVEAQKLMEVSLEGAVG 484
>gi|226228433|ref|YP_002762539.1| putative iron-sulfur cluster assembly protein SufB [Gemmatimonas
aurantiaca T-27]
gi|226091624|dbj|BAH40069.1| putative iron-sulfur cluster assembly protein SufB [Gemmatimonas
aurantiaca T-27]
Length = 477
Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats.
Identities = 311/480 (64%), Positives = 378/480 (78%), Gaps = 6/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ + +Y+YGF T+I+ D P GL ED +RFISAKK EP+W+LEWRL A+RRW TM
Sbjct: 4 TIESLVNREYQYGFTTDIEADTLPPGLTEDTVRFISAKKQEPEWLLEWRLKAFRRWQTMA 63
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P WA + YP ID+ YY+APK+ SLD+VDP+LL TY KLGI + EQ+ L+G
Sbjct: 64 EPHWANLHYPPIDYQAASYYSAPKNSKPLASLDEVDPKLLETYSKLGISLTEQKRLSG-- 121
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
VAVDAVFDSVSV TT+KEEL K GVIFM EA+ EHP+LVKKYL +VVP DNF+A
Sbjct: 122 ---VAVDAVFDSVSVGTTYKEELGKHGVIFMSFGEAVREHPELVKKYLGSVVPYSDNFFA 178
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSF YIPKGVRCPMELSTYFRIN TGQFERTLI+ADEGSYVSYLEGCTA
Sbjct: 179 ALNSAVFSDGSFCYIPKGVRCPMELSTYFRINAAETGQFERTLIVADEGSYVSYLEGCTA 238
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P+RD NQLHAAVVE+VALDNA +KYSTVQNWY GD G GGIYNFVTKRG +KIS
Sbjct: 239 PKRDTNQLHAAVVEIVALDNATVKYSTVQNWYAGDENGVGGIYNFVTKRGKAL-TNAKIS 297
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPS +L+G+ S GEFYS+A+++ QQ D+GTKM+H+ +NT S IVSK
Sbjct: 298 WTQVETGSAITWKYPSVILQGDNSVGEFYSVAVASKMQQADTGTKMIHIGRNTKSTIVSK 357
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISA N+YRGKV + A +RN+TQCDS+L+GN CGAHT PY+E N+S LEHEA
Sbjct: 358 GISAMKGQNSYRGKVQILPKAEGARNYTQCDSMLVGNACGAHTFPYVEVGNNSATLEHEA 417
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+TSKI ++ +FY RG+ E A+++IV+GF +EV ++LPMEFA+EAQ+L+ I+LEGSVG
Sbjct: 418 STSKIGEDQIFYLKARGLDAEQAVSMIVSGFCKEVFKELPMEFALEAQQLLGITLEGSVG 477
>gi|114797351|ref|YP_761308.1| cysteine desulfurase activator complex subunit SufB [Hyphomonas
neptunium ATCC 15444]
gi|114737525|gb|ABI75650.1| FeS assembly protein SufB [Hyphomonas neptunium ATCC 15444]
Length = 504
Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats.
Identities = 356/494 (72%), Positives = 419/494 (84%), Gaps = 11/494 (2%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
TV+ ++++ + Y GF T+I++D APKGL+ED +RFISAKKNEP+W+LEWRL AYRRWL
Sbjct: 11 TVEAAKRLESENYSAGFITDIEMDMAPKGLSEDTVRFISAKKNEPEWLLEWRLEAYRRWL 70
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
TM++PSWAR+ YP IDF YYYAAPK+ +S+DDV E+L YEKLGIP+RE E+L
Sbjct: 71 TMEEPSWARVHYPKIDFQAYYYYAAPKAGAKYKSIDDVPKEILEAYEKLGIPLREAEVLL 130
Query: 127 GVQT-----------SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
GV+ +VAVDAVFDSVSV TTF+EELKK GVIFM ISEA+ EHP+LVKK
Sbjct: 131 GVEGAADTAAAAREKPRVAVDAVFDSVSVATTFREELKKVGVIFMSISEAVHEHPELVKK 190
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVP DNFYA LNSAVF+DGSFVYIPKGVRCPMELSTYFR+N + TGQFERTLIIA
Sbjct: 191 YLGSVVPTSDNFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRMNAENTGQFERTLIIA 250
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DE +YVSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNW+PGD GKGGI+NFV
Sbjct: 251 DEAAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWWPGDEDGKGGIFNFV 310
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKRGDCRG RSKISWTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIA++NG QQ D+GTKM
Sbjct: 311 TKRGDCRGARSKISWTQVETGSAVTWKYPSCILRGDDSVGEFYSIAVTNGRQQADTGTKM 370
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+HL K T SRI+SKGISAG S+NTYRG VS+H+ A +RNFTQCDSLLIG+ CGAHT+PY
Sbjct: 371 IHLGKRTKSRIISKGISAGKSDNTYRGLVSIHKKAEGARNFTQCDSLLIGDRCGAHTVPY 430
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IE++ + LEHEATT+K+S++ LFY QRGI EE A+AL+VNGFVREVLQ+LPMEFAVE
Sbjct: 431 IENRRADAQLEHEATTTKLSEDQLFYVRQRGIAEEQAVALLVNGFVREVLQELPMEFAVE 490
Query: 476 AQKLIDISLEGSVG 489
AQKL+++SLEGSVG
Sbjct: 491 AQKLLEVSLEGSVG 504
>gi|152995373|ref|YP_001340208.1| cysteine desulfurase activator complex subunit SufB [Marinomonas
sp. MWYL1]
gi|150836297|gb|ABR70273.1| FeS assembly protein SufB [Marinomonas sp. MWYL1]
Length = 478
Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats.
Identities = 330/482 (68%), Positives = 403/482 (83%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ K +Y+ GF ++++ + GL+E++IR IS K EP+WMLEWRL A+R WL M
Sbjct: 3 EQIDKALAREYEAGFVSDVESETFEPGLDENVIRRISEMKGEPEWMLEWRLSAFREWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP IDF + YY+APKS P+SLD+VDPELLRTYEKLGIP+ EQ++LAG
Sbjct: 63 EEPEWALVDYPKIDFQSISYYSAPKSMKDKPKSLDEVDPELLRTYEKLGIPLIEQQMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+ AVDAVFDSVSVVTTF+E+L+++GVIF PISEA+ ++PDLVKKY+ +VVP DN+
Sbjct: 123 I-----AVDAVFDSVSVVTTFREKLEEAGVIFCPISEAVHKYPDLVKKYIGSVVPKKDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALN AVFTDGSFVYIPKG RCPMELSTYFRINE+ TGQFERTLIIADEGS+VSYLEGC
Sbjct: 178 YAALNCAVFTDGSFVYIPKGTRCPMELSTYFRINEQNTGQFERTLIIADEGSHVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVA+DNAEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVAMDNAEIKYSTVQNWYPGDENGKGGIYNFVTKRGICH-TNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGS++TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+H+ KNT S I+
Sbjct: 297 ISWTQVETGSSVTWKYPSCILKGDNSVGEFYSVALTRGRQQADTGTKMIHIGKNTKSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN+YRG V ++ GA +RNFTQCDSLLIG+ CGAHT PY+ES+N S +EH
Sbjct: 357 SKGISAGRSNNSYRGLVRMNPGAEGARNFTQCDSLLIGDQCGAHTFPYVESRNPSAIIEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SDE +F C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDEQMFLCRQRGLDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|190573182|ref|YP_001971027.1| cysteine desulfurase activator complex subunit SufB
[Stenotrophomonas maltophilia K279a]
gi|190011104|emb|CAQ44713.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 491
Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats.
Identities = 320/499 (64%), Positives = 387/499 (77%), Gaps = 18/499 (3%)
Query: 1 MVAVRETVDKVRKIDV----------DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNE 50
M ET++ V D +Y GF T I+ D P GL+ED IR +SAKK+E
Sbjct: 1 MA--TETIENVAHDDTPNREIHEQLGRKYSAGFITEIESDSLPPGLDEDTIRALSAKKDE 58
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+WM +WRL AYR +LTM P WA++ ID L YY+APK SLDDV ELL
Sbjct: 59 PEWMTQWRLDAYRHFLTMPMPDWAKLEIAPIDLQALSYYSAPKG-PKYASLDDVPKELLD 117
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
TY+KLG+P+ E+ LAG VAVDAVFDSVSV TTF++EL + G+IF +SEAI EHP
Sbjct: 118 TYDKLGVPLHERAKLAG-----VAVDAVFDSVSVGTTFRKELAEKGIIFCSMSEAIKEHP 172
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LV++YL TVVPVGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFER
Sbjct: 173 ELVRQYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFER 232
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLI+ ++ +YVSYLEGCTAP RDENQLHAAVVELVAL++AEIKYSTVQNWYPGD G GG
Sbjct: 233 TLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQNWYPGDENGVGG 292
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
IYNFVTKR +CRG RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D
Sbjct: 293 IYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQAD 352
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+GTKM+H+ K T S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGA
Sbjct: 353 TGTKMIHVGKRTKSKIVSKGISAGRGQNTYRGLVRVDRNADGARNYTQCDSLLIGKQCGA 412
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT PYIE KN +EHEATTSKISD+ LFYC RGI +E A+++IV+GF ++V ++LPM
Sbjct: 413 HTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSMIVDGFCKQVFRELPM 472
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFAVEA+KL+++SLEGSVG
Sbjct: 473 EFAVEAKKLLEVSLEGSVG 491
>gi|237716682|ref|ZP_04547163.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D1]
gi|262405458|ref|ZP_06082008.1| FeS assembly protein SufB [Bacteroides sp. 2_1_22]
gi|315920744|ref|ZP_07916984.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D2]
gi|229442665|gb|EEO48456.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D1]
gi|262356333|gb|EEZ05423.1| FeS assembly protein SufB [Bacteroides sp. 2_1_22]
gi|313694619|gb|EFS31454.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D2]
Length = 492
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 320/488 (65%), Positives = 395/488 (80%), Gaps = 6/488 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + VRK ++YKYGF T + D +GLNED+IR IS+KK+EP+W+LE+RL AY
Sbjct: 10 EKKTDNEFVRKFAEEKYKYGFTTEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAY 69
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
R WLT++ P+WA +R P ID+ + YYA P K GP+S+++VDPEL++T+ KLGIP+ E
Sbjct: 70 RHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEE 129
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 130 QMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVV 184
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYV
Sbjct: 185 GYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYV 244
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C
Sbjct: 245 SYLEGCTAPMRDENQLHAAIVEIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNC 304
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KN
Sbjct: 305 KGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKN 364
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N
Sbjct: 365 TRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNE 424
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 425 TAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLT 484
Query: 482 ISLEGSVG 489
ISLEGSVG
Sbjct: 485 ISLEGSVG 492
>gi|311746540|ref|ZP_07720325.1| FeS assembly protein SufB [Algoriphagus sp. PR1]
gi|126575440|gb|EAZ79772.1| FeS assembly protein SufB [Algoriphagus sp. PR1]
Length = 481
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 317/486 (65%), Positives = 392/486 (80%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + + + +Y++G+ N + D+AP GLNE+II++IS KK EP W+LEWRL A++
Sbjct: 1 MSKDNQILEEFTSKEYEHGWSVNYEADEAPVGLNEEIIKWISTKKEEPQWLLEWRLKAFK 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W +M +P+WA + YP ID L YY+APK P+SLD+VDPELL+ YE+LGI + EQ+
Sbjct: 61 TWESMVEPAWANVTYPKIDLQSLRYYSAPKQDKKPKSLDEVDPELLQIYERLGINLNEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L G+ AVDAV DSVSV TTFK+ L K G++F SEA+ EHP+LVKKYL +VVP+
Sbjct: 121 KLQGI-----AVDAVLDSVSVGTTFKKTLSKLGIVFCSFSEAVKEHPELVKKYLGSVVPM 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN+YAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN TGQFERTLI+A++ SYVSY
Sbjct: 176 TDNYYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINAANTGQFERTLIVAEDESYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQRDENQLHAAVVE+ A NAE+KYSTVQNW+PGD GKGGIYNFVTKRG C G
Sbjct: 236 LEGCTAPQRDENQLHAAVVEIYAAKNAEVKYSTVQNWFPGDKDGKGGIYNFVTKRGICAG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+H+ KNT
Sbjct: 296 DNSKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSVAVTNNYQQADTGTKMIHIGKNTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRIVSKGISAG S N+YRG+V V + A++SRNF+QCDSLL+G+ CGAHT PYI+ NS+
Sbjct: 356 SRIVSKGISAGKSQNSYRGQVQVMKRASNSRNFSQCDSLLMGDQCGAHTFPYIDIHNSTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ LFYC QRGI E A+ALIVNG+ +EVL +LPMEFAVEAQKL+ ++
Sbjct: 416 KVEHEATTSKIGEDQLFYCNQRGISTEDAVALIVNGYAKEVLNQLPMEFAVEAQKLLALT 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|299147099|ref|ZP_07040166.1| FeS assembly protein SufB [Bacteroides sp. 3_1_23]
gi|298514984|gb|EFI38866.1| FeS assembly protein SufB [Bacteroides sp. 3_1_23]
Length = 492
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 321/488 (65%), Positives = 395/488 (80%), Gaps = 6/488 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + VRK ++YKYGF T + D +GLNED+IR IS+KK+EP+W+LE+RL AY
Sbjct: 10 EKKTDNEFVRKFAEEKYKYGFTTEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAY 69
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
R WLT++ P+WA +R P ID+ + YYA P K GP+S+++VDPEL++T+ KLGIP+ E
Sbjct: 70 RHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEE 129
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 130 QMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVV 184
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLIIAD+ SYV
Sbjct: 185 GYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIIADDDSYV 244
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C
Sbjct: 245 SYLEGCTAPMRDENQLHAAIVEIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNC 304
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KN
Sbjct: 305 KGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKN 364
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N
Sbjct: 365 TRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNE 424
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 425 TAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLT 484
Query: 482 ISLEGSVG 489
ISLEGSVG
Sbjct: 485 ISLEGSVG 492
>gi|237720414|ref|ZP_04550895.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 2_2_4]
gi|229450165|gb|EEO55956.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. 2_2_4]
Length = 492
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 320/488 (65%), Positives = 395/488 (80%), Gaps = 6/488 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + VRK ++YKYGF T + D +GLNED+IR IS+KK+EP+W+LE+RL AY
Sbjct: 10 EKKTDNEFVRKFAEEKYKYGFTTEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAY 69
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
R WLT++ P+WA +R P ID+ + YYA P K GP+S+++VDPEL++T+ KLGIP+ E
Sbjct: 70 RHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSIEEVDPELIKTFNKLGIPLEE 129
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 130 QMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVV 184
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYV
Sbjct: 185 GYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYV 244
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C
Sbjct: 245 SYLEGCTAPMRDENQLHAAIVEIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNC 304
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KN
Sbjct: 305 KGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKN 364
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N
Sbjct: 365 TRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNE 424
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 425 TAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLT 484
Query: 482 ISLEGSVG 489
ISLEGSVG
Sbjct: 485 ISLEGSVG 492
>gi|71274754|ref|ZP_00651042.1| FeS assembly protein SufB [Xylella fastidiosa Dixon]
gi|71901190|ref|ZP_00683293.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
gi|71164486|gb|EAO14200.1| FeS assembly protein SufB [Xylella fastidiosa Dixon]
gi|71729034|gb|EAO31162.1| FeS assembly protein SufB [Xylella fastidiosa Ann-1]
Length = 555
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 317/487 (65%), Positives = 383/487 (78%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++D Y+ GF T I+ D P GLNE IIR +SAKK+EP+WM EWRL AY
Sbjct: 76 ATPQNAEILERLDR-HYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWRLAAY 134
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 135 RHWLNMPMPEWAKLHIAPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 193
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVS+ TTF++EL + G+IF ISEAI EHPDL+++YL +VVP
Sbjct: 194 ARLAG-----VAVDAVFDSVSLGTTFRKELAEKGIIFCSISEAIQEHPDLIRQYLGSVVP 248
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
V DN++AALNSAVF+DGSFV+IPK VRCPMELSTYFRIN TGQFERTLI+ +E +YVS
Sbjct: 249 VRDNYFAALNSAVFSDGSFVFIPKSVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVS 308
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVA ++AEIKYSTVQNWYPGD G+GGIYNFVTKR +CR
Sbjct: 309 YLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECR 368
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK+ WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A++ QQ D+GTKM+H+ K T
Sbjct: 369 GARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRT 428
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V + R A +RN TQCDSLLIG CGAHT PYIE K+ +
Sbjct: 429 KSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIGKQCGAHTFPYIEVKHPN 488
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI EE A+++IV+GF ++V ++LPMEFAVEA+KL+DI
Sbjct: 489 ATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDI 548
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 549 SLEGSVG 555
>gi|327404074|ref|YP_004344912.1| Iron-regulated ABC transporter membrane component SufB [Fluviicola
taffensis DSM 16823]
gi|327319582|gb|AEA44074.1| Iron-regulated ABC transporter membrane component SufB [Fluviicola
taffensis DSM 16823]
Length = 481
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 325/483 (67%), Positives = 390/483 (80%), Gaps = 6/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
D + ++ +YK+GF T+I+ D+AP GLNEDIIRFISAKK EP W+LE+RL + W
Sbjct: 5 ENDLAKDLENSEYKFGFTTDIESDRAPIGLNEDIIRFISAKKEEPSWLLEYRLKCFHIWS 64
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
M +P+WA I YP +F + YYAAPK +S DDVDPE+ T KLGI + EQ+ L
Sbjct: 65 EMTEPTWAHISYPKPNFQGISYYAAPKQTKKYESWDDVDPEMKATMAKLGISMEEQQRLT 124
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G VAVD V DSVSV T+FK +LK+ G+IF SEA+ EHP+LVK+Y+ +VVP DN
Sbjct: 125 G-----VAVDFVMDSVSVATSFKAKLKELGIIFCSFSEAVQEHPELVKQYMGSVVPATDN 179
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
FYAALNSAVFTDGSF YIPKGVRCPMELSTYFRINE TGQFERTL+IADEGSYVSYLEG
Sbjct: 180 FYAALNSAVFTDGSFCYIPKGVRCPMELSTYFRINEANTGQFERTLVIADEGSYVSYLEG 239
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAPQRDENQLHAAVVELVAL++AEIKYSTVQNWYPGD G+GGI+NFVTKRG C +
Sbjct: 240 CTAPQRDENQLHAAVVELVALNDAEIKYSTVQNWYPGDKNGQGGIFNFVTKRGIC-ETNA 298
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+HL KNT S I
Sbjct: 299 KISWTQVETGSAVTWKYPSCILKGDNSIGEFYSVAVTNNYQQADTGTKMIHLGKNTKSTI 358
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+SKGISAG S+N+YRG V +H+ A ++RNF+QCDSLL+ + CGAHT PYIE KN + +E
Sbjct: 359 ISKGISAGKSHNSYRGLVQIHKNAHNARNFSQCDSLLMTDECGAHTFPYIECKNPTAKIE 418
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEATTSKI ++ +FYCLQRGI EE AI+LIVNG+ +EVL +LPMEFAVEAQKL+ ISLEG
Sbjct: 419 HEATTSKIGEDQIFYCLQRGISEEKAISLIVNGYCKEVLNQLPMEFAVEAQKLLTISLEG 478
Query: 487 SVG 489
SVG
Sbjct: 479 SVG 481
>gi|254447014|ref|ZP_05060481.1| FeS assembly protein SufB [gamma proteobacterium HTCC5015]
gi|198263153|gb|EDY87431.1| FeS assembly protein SufB [gamma proteobacterium HTCC5015]
Length = 481
Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats.
Identities = 332/481 (69%), Positives = 396/481 (82%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
K ++ +Y++GF T I+ D GLNED+IR +S K EP++MLEWRL AYR+WL M+
Sbjct: 6 KPEELIKREYEHGFVTEIEADTFEPGLNEDVIRRLSKIKQEPEFMLEWRLNAYRQWLEME 65
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+P WA + YP ID++ + YY+APK PQSLDDVDPELL+TYEKLGIP+ E+E LAG
Sbjct: 66 EPEWAHVNYPKIDYNAVSYYSAPKKKEDMPQSLDDVDPELLKTYEKLGIPLHEREKLAG- 124
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTFK++L +GVIF PISEA+ HP+LV+KYL +VVP GDNFY
Sbjct: 125 ----VAVDAVFDSVSVATTFKDKLADAGVIFCPISEAVQTHPELVEKYLGSVVPAGDNFY 180
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A LNSAVF+DGSFVYIPKGVRCP+ELSTYFRIN TGQFERTLIIADEGSYVSYLEGCT
Sbjct: 181 ACLNSAVFSDGSFVYIPKGVRCPLELSTYFRINAANTGQFERTLIIADEGSYVSYLEGCT 240
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDENQLHAAVVELVAL +A+IKYSTVQNWYPGD GKGGIYNFVTKRG C G SKI
Sbjct: 241 APMRDENQLHAAVVELVALGDAQIKYSTVQNWYPGDENGKGGIYNFVTKRGACLGDYSKI 300
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSA+TWKYPSC+LRG+ S GEFYS+A++N +QQ D+GTKM+H+ KNT+S I++
Sbjct: 301 SWTQVETGSAVTWKYPSCVLRGDHSVGEFYSVALTNNYQQADTGTKMIHIGKNTSSTIIA 360
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S+ +YRG V A ++RNFTQCDSLLIG+ CGAHT PYIESK+ + LEHE
Sbjct: 361 KGISAGRSDQSYRGLVRFAPTADNARNFTQCDSLLIGDQCGAHTFPYIESKHQNATLEHE 420
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSK+SDE LF C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEG+V
Sbjct: 421 ATTSKVSDEQLFLCQQRGIDPEQAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAV 480
Query: 489 G 489
G
Sbjct: 481 G 481
>gi|160883926|ref|ZP_02064929.1| hypothetical protein BACOVA_01900 [Bacteroides ovatus ATCC 8483]
gi|260172450|ref|ZP_05758862.1| cysteine desulfurase activator complex subunit SufB [Bacteroides
sp. D2]
gi|156110656|gb|EDO12401.1| hypothetical protein BACOVA_01900 [Bacteroides ovatus ATCC 8483]
Length = 499
Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats.
Identities = 320/488 (65%), Positives = 395/488 (80%), Gaps = 6/488 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + VRK ++YKYGF T + D +GLNED+IR IS+KK+EP+W+LE+RL AY
Sbjct: 17 EKKTDNEFVRKFAEEKYKYGFTTEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAY 76
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
R WLT++ P+WA +R P ID+ + YYA P K GP+S+++VDPEL++T+ KLGIP+ E
Sbjct: 77 RHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEE 136
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 137 QMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVV 191
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYV
Sbjct: 192 GYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYV 251
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C
Sbjct: 252 SYLEGCTAPMRDENQLHAAIVEIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNC 311
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KN
Sbjct: 312 KGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKN 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N
Sbjct: 372 TRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNE 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 432 TAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLT 491
Query: 482 ISLEGSVG 489
ISLEGSVG
Sbjct: 492 ISLEGSVG 499
>gi|116071400|ref|ZP_01468669.1| FeS assembly protein SufB [Synechococcus sp. BL107]
gi|116066805|gb|EAU72562.1| FeS assembly protein SufB [Synechococcus sp. BL107]
Length = 479
Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats.
Identities = 294/483 (60%), Positives = 374/483 (77%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+E+++R IS+KK+EP+++L +RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIDKGLSEEVVRLISSKKDEPEFLLNFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + Y AID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYEAIDYQDIIYYAAPKQQAKKASLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F +EA+ +HP+L++KYL +VV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFTEAVKDHPELIEKYLGSVVASNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELV LD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVVLDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGARS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADTGTKMIHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + GA +RN++QCDS+LIG+ A+T PYI S+ +E
Sbjct: 357 VSKGISAGRSSNSYRGLVQMGPGAKGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAIE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|332299229|ref|YP_004441150.1| FeS assembly protein SufB [Porphyromonas asaccharolytica DSM 20707]
gi|332176292|gb|AEE11982.1| FeS assembly protein SufB [Porphyromonas asaccharolytica DSM 20707]
Length = 502
Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats.
Identities = 310/488 (63%), Positives = 384/488 (78%), Gaps = 6/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
D + I YKYGF T++ + PKGLNE+++R ISAKK EP+W+LE+RL A
Sbjct: 21 AVTPTGEDILDDITQGDYKYGFVTDVHTETIPKGLNEEVVRLISAKKEEPEWLLEFRLKA 80
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y WLT++ P WA + P ID+ D+ YYAAP+ +DPE+ +T++KLGIP+ E
Sbjct: 81 YHHWLTLERPDWAHLSIPEIDYQDIIYYAAPRHKTPGDG--TIDPEIEKTFDKLGIPLHE 138
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ +L+G +AVDAV DSVSV TTF+ +LK+ G+IF +EA+ EHPDLV+KYL VV
Sbjct: 139 RAMLSG----NMAVDAVMDSVSVKTTFRTKLKELGIIFCSFNEAVREHPDLVRKYLGKVV 194
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DN++AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADEG+YV
Sbjct: 195 SSHDNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADEGAYV 254
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++A +AE+KYSTVQNWYPGD G+GGIYNFVTKRG C
Sbjct: 255 SYLEGCTAPMRDENQLHAAIVEIIAETDAEVKYSTVQNWYPGDKDGRGGIYNFVTKRGLC 314
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++N +QQ D+GTKM+HL +N
Sbjct: 315 RGDRSKISWTQVETGSAITWKYPSCILRGDDSVGEFYSVAVTNNYQQADTGTKMIHLGRN 374
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG VS+ A ++RN +QCDSLL+ ++CGAHT PY + +N
Sbjct: 375 TRSTIVSKGISAGSSQNSYRGLVSIAASAENARNHSQCDSLLLSDHCGAHTYPYADIRND 434
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEATTSKI+++ LFYC QRGI E A+ LIVNG+ REV+ KLPMEFAVEAQKL+
Sbjct: 435 SAVVEHEATTSKINEDQLFYCNQRGITTEEAVGLIVNGYAREVMSKLPMEFAVEAQKLLS 494
Query: 482 ISLEGSVG 489
++LEGSVG
Sbjct: 495 VTLEGSVG 502
>gi|148243117|ref|YP_001228274.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. RCC307]
gi|147851427|emb|CAK28921.1| SufB protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
Length = 492
Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats.
Identities = 290/479 (60%), Positives = 370/479 (77%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V + Y+YGF T+I+ +K KGL+E+++R ISAKK EP ++L++RL A+R+W M +
Sbjct: 19 VSDLVSQPYRYGFVTDIETEKIAKGLSEEVVRLISAKKKEPQFLLDFRLRAFRQWQRMAE 78
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA + YP ID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 79 PDWAALGYPPIDYQDIVYYAAPKQEQKKASLDEVDPKLLETFDKLGIPLSEQKRLS---- 134
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVS+ TT+KE+L + GVIF SEA+ EHP+L+++YL +VVP+ DN++AA
Sbjct: 135 -NVAVDAVFDSVSIATTYKEQLAEHGVIFCSFSEAVEEHPELIERYLGSVVPIADNYFAA 193
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFV+IPKGV CPM+LSTYFRIN TGQFERTLI+A+EG+ VSYLEGCTAP
Sbjct: 194 LNSAVFSDGSFVFIPKGVTCPMDLSTYFRINSGDTGQFERTLIVAEEGASVSYLEGCTAP 253
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVELVA D+A IKYSTVQNWY GD GKGGIYNFVTKRG C+G RS ISW
Sbjct: 254 MFDTNQLHAAVVELVAFDDASIKYSTVQNWYAGDENGKGGIYNFVTKRGICKGARSHISW 313
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L G S GEFYS+A++N QQ D+GTKM+H+ + S IVSKG
Sbjct: 314 TQVETGSAITWKYPSCVLAGADSVGEFYSVALTNNCQQADTGTKMVHVGPRSRSTIVSKG 373
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ +EHEA+
Sbjct: 374 ISAGRSANSYRGLVQMGAKAIGARNYSQCDSMLIGDQAAANTYPYIRSQQPQATVEHEAS 433
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T +IS++ LFY RGI E A++++V+GF R+V +LP+EFA EA KL+ + LEGSVG
Sbjct: 434 TCRISEDQLFYLQSRGIAFEEAVSMMVSGFCRDVFNQLPLEFAAEADKLLALKLEGSVG 492
>gi|116073826|ref|ZP_01471088.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
gi|116069131|gb|EAU74883.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
Length = 479
Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats.
Identities = 296/483 (61%), Positives = 377/483 (78%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T+I+ +K KGL+ED++R IS+KK EP ++L++RL AYR WL
Sbjct: 2 TSVSTRDLVSQPYKYGFVTDIETEKIAKGLSEDVVRLISSKKEEPQFLLDFRLRAYRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA++ Y AID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAQLGYTAIDYQDIVYYAAPKQQEKKASLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT++E+L + GV+F ISEAI ++P+L+++YL +VVP DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYREKLAEHGVVFCSISEAIKDYPELIERYLGSVVPSNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGARS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNRQQADTGTKMIHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ +E
Sbjct: 357 VSKGISAGHSSNSYRGLVQIGPAAKGARNYSQCDSMLIGDEAAANTYPYIRSQQPQAAIE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|313887333|ref|ZP_07821024.1| FeS assembly protein SufB [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923252|gb|EFR34070.1| FeS assembly protein SufB [Porphyromonas asaccharolytica
PR426713P-I]
Length = 502
Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats.
Identities = 310/488 (63%), Positives = 384/488 (78%), Gaps = 6/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
D + I YKYGF T++ + PKGLNE+++R ISAKK EP+W+LE+RL A
Sbjct: 21 AVTPTGEDILDDITQGDYKYGFVTDVHTETIPKGLNEEVVRLISAKKEEPEWLLEFRLKA 80
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y WLT++ P WA + P ID+ D+ YYAAP+ +DPE+ +T++KLGIP+ E
Sbjct: 81 YHHWLTLERPDWAHLSIPEIDYQDIIYYAAPRHKTSGDGP--IDPEIEKTFDKLGIPLHE 138
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ +L+G +AVDAV DSVSV TTF+ +LK+ G+IF +EA+ EHPDLV+KYL VV
Sbjct: 139 RAMLSG----NMAVDAVMDSVSVKTTFRTKLKELGIIFCSFNEAVREHPDLVRKYLGKVV 194
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DN++AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADEG+YV
Sbjct: 195 SSHDNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADEGAYV 254
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++A +AE+KYSTVQNWYPGD G+GGIYNFVTKRG C
Sbjct: 255 SYLEGCTAPMRDENQLHAAIVEIIAETDAEVKYSTVQNWYPGDKDGRGGIYNFVTKRGLC 314
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++N +QQ D+GTKM+HL +N
Sbjct: 315 RGDRSKISWTQVETGSAITWKYPSCILRGDDSVGEFYSVAVTNNYQQADTGTKMIHLGRN 374
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG VS+ A ++RN +QCDSLL+ ++CGAHT PY + +N
Sbjct: 375 TRSTIVSKGISAGSSQNSYRGLVSIAASAENARNHSQCDSLLLSDHCGAHTYPYADIRND 434
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEATTSKI+++ LFYC QRGI E A+ LIVNG+ REV+ KLPMEFAVEAQKL+
Sbjct: 435 SAVVEHEATTSKINEDQLFYCNQRGITTEEAVGLIVNGYAREVMSKLPMEFAVEAQKLLS 494
Query: 482 ISLEGSVG 489
++LEGSVG
Sbjct: 495 VTLEGSVG 502
>gi|149196443|ref|ZP_01873498.1| component of SufBCD complex [Lentisphaera araneosa HTCC2155]
gi|149140704|gb|EDM29102.1| component of SufBCD complex [Lentisphaera araneosa HTCC2155]
Length = 479
Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats.
Identities = 305/470 (64%), Positives = 377/470 (80%), Gaps = 5/470 (1%)
Query: 20 KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYP 79
K+GF T+I+ D PKGLNED+++ IS +K EP+WMLE+RL A+ RW M +P WA + YP
Sbjct: 15 KFGFVTDIETDSIPKGLNEDVVKLISERKEEPEWMLEFRLKAFARWKKMVEPVWADLDYP 74
Query: 80 AIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVF 139
IDF D+ YY+APK +SLD+VDPELL+T+EKLGIP+ EQ+ L G VAVDAVF
Sbjct: 75 KIDFQDIVYYSAPKQAETHESLDEVDPELLKTFEKLGIPLSEQKRLTG-----VAVDAVF 129
Query: 140 DSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG 199
DSVSV TT +EEL + GVIF ISEAI +HP+LVKK++++VVPVGDNFYAALN+AVFTDG
Sbjct: 130 DSVSVGTTHQEELAEHGVIFCSISEAIKDHPELVKKHMASVVPVGDNFYAALNAAVFTDG 189
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
SF YIPKGV CPM+LSTYFRIN TGQFERTLIIA+EGSYV+YLEGCTAPQRDENQLHA
Sbjct: 190 SFCYIPKGVTCPMDLSTYFRINAAETGQFERTLIIAEEGSYVNYLEGCTAPQRDENQLHA 249
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
AVVE++A +NA +KYSTVQNWY GD GKGGIYNFVTKRG C+G S ISWTQ+E GSAI
Sbjct: 250 AVVEIIAEENATVKYSTVQNWYAGDEDGKGGIYNFVTKRGICKGDNSFISWTQVEAGSAI 309
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
TWKYPS +L+G+ S GEFYS+A++N Q D+GTKM+H+ KNT S I+SKGISA S N
Sbjct: 310 TWKYPSVILKGDNSTGEFYSVALTNNKMQADTGTKMIHIGKNTKSTIISKGISADDSRNC 369
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
YRG V + GA +RN++QCDS+L+G+ C A T PY+E +N++ LEHEA+TSKIS + +
Sbjct: 370 YRGLVKIMPGAEGARNYSQCDSMLVGDKCSASTFPYLEVQNNTAVLEHEASTSKISADQI 429
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
FY L RGI E AI L+VNGF +EV ++LP+EF+VEA KL+++ LE S+G
Sbjct: 430 FYLLSRGIDMEEAIHLLVNGFCKEVFKELPLEFSVEAVKLLEMKLENSIG 479
>gi|293370443|ref|ZP_06616996.1| FeS assembly protein SufB [Bacteroides ovatus SD CMC 3f]
gi|294646237|ref|ZP_06723891.1| FeS assembly protein SufB [Bacteroides ovatus SD CC 2a]
gi|294809095|ref|ZP_06767813.1| FeS assembly protein SufB [Bacteroides xylanisolvens SD CC 1b]
gi|298480550|ref|ZP_06998747.1| FeS assembly protein SufB [Bacteroides sp. D22]
gi|292634435|gb|EFF52971.1| FeS assembly protein SufB [Bacteroides ovatus SD CMC 3f]
gi|292638455|gb|EFF56819.1| FeS assembly protein SufB [Bacteroides ovatus SD CC 2a]
gi|294443649|gb|EFG12398.1| FeS assembly protein SufB [Bacteroides xylanisolvens SD CC 1b]
gi|295086247|emb|CBK67770.1| Iron-regulated ABC transporter membrane component SufB [Bacteroides
xylanisolvens XB1A]
gi|298273371|gb|EFI14935.1| FeS assembly protein SufB [Bacteroides sp. D22]
Length = 500
Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats.
Identities = 320/488 (65%), Positives = 395/488 (80%), Gaps = 6/488 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + VRK ++YKYGF T + D +GLNED+IR IS+KK+EP+W+LE+RL AY
Sbjct: 18 EKKTDNEFVRKFAEEKYKYGFTTEVHTDIIERGLNEDVIRLISSKKDEPEWLLEFRLKAY 77
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAP-KSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
R WLT++ P+WA +R P ID+ + YYA P K GP+S+++VDPEL++T+ KLGIP+ E
Sbjct: 78 RHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMEEVDPELIKTFNKLGIPLEE 137
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q L+G +AVDAV DSVSV TTFKE L + G+IF SEA+ EHPDLVKKY+ +VV
Sbjct: 138 QMALSG-----MAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVREHPDLVKKYMGSVV 192
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DNF+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+AD+ SYV
Sbjct: 193 GYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVADDDSYV 252
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD++GKGG+YNFVTKRG+C
Sbjct: 253 SYLEGCTAPMRDENQLHAAIVEIIVHDRAEVKYSTVQNWYPGDAEGKGGVYNFVTKRGNC 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+G+ SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL KN
Sbjct: 313 KGVDSKLSWTQVETGSAITWKYPSCILTGDNSTAEFYSVAVTNNYQQADTGTKMIHLGKN 372
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG V V A ++RN++QCDSLL+G+ CGAHT PY++ N
Sbjct: 373 TRSTIVSKGISAGHSENSYRGLVRVAEKADNARNYSQCDSLLLGDKCGAHTFPYMDIHNE 432
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS++ +FYC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 433 TAVVEHEATTSKISEDQIFYCNQRGIPTEDAIGLIVNGYAKEVLNKLPMEFAVEAQKLLT 492
Query: 482 ISLEGSVG 489
ISLEGSVG
Sbjct: 493 ISLEGSVG 500
>gi|254523553|ref|ZP_05135608.1| FeS assembly protein SufB [Stenotrophomonas sp. SKA14]
gi|219721144|gb|EED39669.1| FeS assembly protein SufB [Stenotrophomonas sp. SKA14]
Length = 491
Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats.
Identities = 320/499 (64%), Positives = 386/499 (77%), Gaps = 18/499 (3%)
Query: 1 MVAVRETVDKVRKIDV----------DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNE 50
M ET++ V D +Y GF T I+ D P GL+ED IR +SAKK E
Sbjct: 1 MA--TETIENVAHDDTPNREIHEQLGRKYSAGFITEIESDSLPPGLDEDTIRALSAKKEE 58
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+WM +WRL AYR +LTM P WA++ ID L YY+APK SLDDV ELL
Sbjct: 59 PEWMTQWRLDAYRHFLTMPMPDWAKLEIAPIDLQALSYYSAPKG-PKYASLDDVPKELLD 117
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
TY+KLG+P+ E+ LAG VAVDAVFDSVSV TTF++EL + G+IF +SEAI EHP
Sbjct: 118 TYDKLGVPLHERAKLAG-----VAVDAVFDSVSVGTTFRKELAEKGIIFCSMSEAIKEHP 172
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LV++YL TVVPVGDN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFER
Sbjct: 173 ELVRQYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFER 232
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLI+ ++ +YVSYLEGCTAP RDENQLHAAVVELVAL++AEIKYSTVQNWYPGD G GG
Sbjct: 233 TLIVCEDKAYVSYLEGCTAPMRDENQLHAAVVELVALEDAEIKYSTVQNWYPGDENGVGG 292
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
IYNFVTKR +CRG RSK++WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A+++ QQ D
Sbjct: 293 IYNFVTKRAECRGARSKVTWTQVETGSAITWKYPSCVLLGDDSVGEFHSVALTHHRQQAD 352
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+GTKM+H+ K T S+IVSKGISAG NTYRG V V R A +RN+TQCDSLLIG CGA
Sbjct: 353 TGTKMIHVGKRTKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGA 412
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT PYIE KN +EHEATTSKISD+ LFYC RGI +E A+++IV+GF ++V ++LPM
Sbjct: 413 HTFPYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSMIVDGFCKQVFRELPM 472
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFAVEA+KL+++SLEGSVG
Sbjct: 473 EFAVEAKKLLEVSLEGSVG 491
>gi|228470979|ref|ZP_04055824.1| FeS assembly protein SufB [Porphyromonas uenonis 60-3]
gi|228307376|gb|EEK16390.1| FeS assembly protein SufB [Porphyromonas uenonis 60-3]
Length = 502
Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats.
Identities = 311/488 (63%), Positives = 386/488 (79%), Gaps = 6/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
D + I YKYGF T++ + PKGLNE+++R ISAKK EP+W+LE+RL A
Sbjct: 21 AVTPTGEDILDDITQGDYKYGFVTDVHTETIPKGLNEEVVRLISAKKEEPEWLLEFRLKA 80
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR WLT++ P WA + P ID+ D+ YYAAP+ D +DPE+ +T++KLGIP+ E
Sbjct: 81 YRHWLTLERPDWAHLSIPEIDYQDIIYYAAPRHKNEGD--DTIDPEIEKTFDKLGIPLHE 138
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ +L+G +AVDAV DSVSV TTF+ +L++ G++F +EA+ EHPDLV+KYL VV
Sbjct: 139 RAMLSG----NMAVDAVMDSVSVKTTFRTKLQELGIVFCSFNEAVREHPDLVRKYLGKVV 194
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DN++AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADEG+YV
Sbjct: 195 SSHDNYFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADEGAYV 254
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++A +AE+KYSTVQNWYPGD G+GGIYNFVTKRG C
Sbjct: 255 SYLEGCTAPMRDENQLHAAIVEIIAETDAEVKYSTVQNWYPGDKDGRGGIYNFVTKRGLC 314
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++N +QQ D+GTKM+HL +N
Sbjct: 315 RGDRSKISWTQVETGSAITWKYPSCILRGDDSVGEFYSVAVTNNYQQADTGTKMIHLGRN 374
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSKGISAG S N+YRG VS+ A ++RN +QCDSLL+ N+CGAHT PY + +N
Sbjct: 375 TRSTIVSKGISAGSSQNSYRGLVSIAASAENARNHSQCDSLLLSNHCGAHTYPYADIRND 434
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEATTSKI+++ LFYC QRGI E A+ LIVNG+ REV+ KLPMEFAVEAQKL+
Sbjct: 435 SAVVEHEATTSKINEDQLFYCNQRGITTEEAVGLIVNGYAREVMSKLPMEFAVEAQKLLS 494
Query: 482 ISLEGSVG 489
++LEGSVG
Sbjct: 495 VTLEGSVG 502
>gi|33864855|ref|NP_896414.1| cysteine desulfurase activator complex subunit SufB [Synechococcus
sp. WH 8102]
gi|33632378|emb|CAE06834.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
Length = 479
Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats.
Identities = 297/483 (61%), Positives = 371/483 (76%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+ED++R ISAKK EP ++LE+RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIAKGLSEDVVRLISAKKEEPAFLLEFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + YP ID+ D+ YY+APK SLD+VDP LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYPLIDYQDIVYYSAPKQQDKKSSLDEVDPRLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F SEA+ EHP+L+++YL +VV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPELIERYLGSVVASNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 CFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDEDGVGGIYNFVTKRGQCRGARS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNRQQADTGTKMVHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ +E
Sbjct: 357 VSKGISAGHSSNSYRGLVQMGPAAKGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAIE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|332141975|ref|YP_004427713.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551997|gb|AEA98715.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
macleodii str. 'Deep ecotype']
Length = 478
Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats.
Identities = 332/482 (68%), Positives = 397/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y GF + I+ + GL+E +IR ISA KNEP+WMLEWRL +YR WL M
Sbjct: 3 EQIEQALERKYDAGFYSEIESETFESGLDESVIRRISAMKNEPEWMLEWRLKSYRAWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP ID+ + YY+APKS PQSLD+VDPELLRTYEKLGIP+ EQE+LAG
Sbjct: 63 EEPDWAHVDYPKIDYQSISYYSAPKSMKDKPQSLDEVDPELLRTYEKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSVVTTF+E+L+ +GVIF PISEA+ ++PDLVKKY+ +VVP DN+
Sbjct: 123 -----VAVDAVFDSVSVVTTFREKLEDAGVIFCPISEAVQKYPDLVKKYIGSVVPRTDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFVYIPKG RCPMELSTYFRINE TGQFERTLI+ADEGSYVSYLEGC
Sbjct: 178 FAALNSAVFTDGSFVYIPKGTRCPMELSTYFRINEMNTGQFERTLIVADEGSYVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVA+D+A+IKYSTVQNWYPGD GKGGIYNFVTKRG +K
Sbjct: 238 TAPQRDENQLHAAVVELVAMDDAQIKYSTVQNWYPGDENGKGGIYNFVTKRGVAH-TNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+H+ KNT S I+
Sbjct: 297 ISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGRQQADTGTKMIHVGKNTKSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN YRG V + A +RNFT+CDSLLIG+ CGAHT PYIES+N S +EH
Sbjct: 357 SKGISAGNSNNAYRGLVQMGPRADGARNFTECDSLLIGDKCGAHTFPYIESRNPSAIVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SDE LF C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDEQLFLCQQRGLDTEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|260435424|ref|ZP_05789394.1| FeS assembly protein SufB [Synechococcus sp. WH 8109]
gi|260413298|gb|EEX06594.1| FeS assembly protein SufB [Synechococcus sp. WH 8109]
Length = 479
Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats.
Identities = 296/483 (61%), Positives = 374/483 (77%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+E+++R ISAKK EPD++L++RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIAKGLSEEVVRLISAKKEEPDFLLQFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + Y ID+ D+ YYAAPK + SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYTEIDYQDIVYYAAPKQLEKKASLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F SEA+ EHP+L+++YL TVV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFSEAVKEHPELIERYLGTVVSSNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLEG
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLEG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D +QLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG RS
Sbjct: 237 CTAPMFDTSQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGHRS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADTGTKMVHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSKGISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ +E
Sbjct: 357 VSKGISAGRSSNSYRGLVQMGPNAKGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAIE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEG
Sbjct: 417 HEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEG 476
Query: 487 SVG 489
SVG
Sbjct: 477 SVG 479
>gi|28198601|ref|NP_778915.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa Temecula1]
gi|182681284|ref|YP_001829444.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa M23]
gi|28056685|gb|AAO28564.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182631394|gb|ACB92170.1| FeS assembly protein SufB [Xylella fastidiosa M23]
gi|307579735|gb|ADN63704.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 485
Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats.
Identities = 318/487 (65%), Positives = 385/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++D +Y+ GF T I+ D P GLNE IIR +SAKK+EP+WM EWRL AY
Sbjct: 6 ATPQNAEILERLDR-RYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWRLAAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 65 RHWLNMPMPEWAKLHIAPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVS+ TTF++EL + G+IF ISEAI EHPDL+++YL +VVP
Sbjct: 124 ARLAG-----VAVDAVFDSVSLGTTFRKELAEKGIIFCSISEAIQEHPDLIRQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
V DN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ +E +YVS
Sbjct: 179 VRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVA ++AEIKYSTVQNWYPGD G+GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK+ WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A++ QQ D+GTKM+H+ K T
Sbjct: 299 GARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V + R A +RN TQCDSLLIG CGAHT PYIE K+ +
Sbjct: 359 KSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIGKQCGAHTFPYIEVKHPN 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI EE A+++IV+GF ++V ++LPMEFAVEA+KL+DI
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDI 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|118497443|ref|YP_898493.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. novicida U112]
gi|195536134|ref|ZP_03079141.1| FeS assembly protein SufB [Francisella tularensis subsp. novicida
FTE]
gi|254372804|ref|ZP_04988293.1| sufS activator complex [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374264|ref|ZP_04989746.1| protein ycf24 [Francisella novicida GA99-3548]
gi|118423349|gb|ABK89739.1| sufS activator complex, sufB subunit [Francisella novicida U112]
gi|151570531|gb|EDN36185.1| sufS activator complex [Francisella novicida GA99-3549]
gi|151571984|gb|EDN37638.1| protein ycf24 [Francisella novicida GA99-3548]
gi|194372611|gb|EDX27322.1| FeS assembly protein SufB [Francisella tularensis subsp. novicida
FTE]
gi|328676939|gb|AEB27809.1| Iron-sulfur cluster assembly protein SufB [Francisella cf. novicida
Fx1]
Length = 481
Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats.
Identities = 337/482 (69%), Positives = 402/482 (83%), Gaps = 4/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF TNI+ + GLNED+IR ISA+KNEP+++LEWRL AY +WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNEPEFLLEWRLKAYHKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + YP IDF + YY++PKS P+SLD+VDPE++ TY KLGIP+ EQE+LAG
Sbjct: 63 KSPKWADLNYPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--RNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGC
Sbjct: 181 FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCH-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + AA++RNF+QCDSLLIG+NCGAHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEAQKL+++SLEG+
Sbjct: 420 EATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGA 479
Query: 488 VG 489
VG
Sbjct: 480 VG 481
>gi|88801812|ref|ZP_01117340.1| hypothetical protein PI23P_04097 [Polaribacter irgensii 23-P]
gi|88782470|gb|EAR13647.1| hypothetical protein PI23P_04097 [Polaribacter irgensii 23-P]
Length = 482
Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats.
Identities = 328/489 (67%), Positives = 390/489 (79%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E D +++ +YKYGF T I+ + KGL+E+++ IS KKNEPDWM +WRL
Sbjct: 1 MSKYTE-DDLEQELKTKEYKYGFYTEIESETFAKGLSEEVVIAISKKKNEPDWMTDWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR W TMK+P WA + Y F ++ YY+APK+ SLD+VDPELL T+++LGI +
Sbjct: 60 AYRVWKTMKEPEWANVHYEKPKFQEIAYYSAPKAKPKLNSLDEVDPELLDTFKRLGISLD 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LA VAVD V DSVSV TTFK+ L + G+IFMPISEAI EHP+LV+KYL TV
Sbjct: 120 EQKKLA-----NVAVDIVIDSVSVATTFKKSLGEKGIIFMPISEAIQEHPELVRKYLGTV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRINE GTGQFERTL++AD+GSY
Sbjct: 175 IPTTDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINEGGTGQFERTLVVADKGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+A+D+AEIKYSTVQNWYPG+ +GKGG+YNFVTKR
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIAMDDAEIKYSTVQNWYPGNKEGKGGVYNFVTKRAL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +K+SWTQ+ETGSAITWKYPSC+L+G S GEFYSIA++N QQ D+GTKM+HL K
Sbjct: 295 C-ETNAKVSWTQVETGSAITWKYPSCILKGNNSVGEFYSIAVTNNHQQADTGTKMIHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V + A ++RNF+QCDSLL+GN+CGAHT PYIE KN
Sbjct: 354 NTRSTIISKGISAGKSQNSYRGLVQISPRAENARNFSQCDSLLMGNDCGAHTFPYIEVKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI +E LFYC QRGI E AIALIVNGF +EVL LPMEFAVEAQKL+
Sbjct: 414 KTAQIEHEATTSKIGEEQLFYCNQRGIDTEKAIALIVNGFSKEVLNNLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|332183984|gb|AEE26238.1| Iron-sulfur cluster assembly protein SufB [Francisella cf. novicida
3523]
Length = 481
Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats.
Identities = 337/482 (69%), Positives = 402/482 (83%), Gaps = 4/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF TNI+ + GLNED+IR ISA+KNEP+++LEWRL AY +WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNEPEFLLEWRLKAYHKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + YP IDF + YY++PKS P+SLD+VDPE++ TY KLGIP+ EQE+LAG
Sbjct: 63 KSPKWADLNYPPIDFQAISYYSSPKSLKDHPKSLDEVDPEIIETYNKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--RNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGC
Sbjct: 181 FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCY-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + AA++RNF+QCDSLLIG+NCGAHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEAQKL+++SLEG+
Sbjct: 420 EATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGA 479
Query: 488 VG 489
VG
Sbjct: 480 VG 481
>gi|239994260|ref|ZP_04714784.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
macleodii ATCC 27126]
Length = 478
Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats.
Identities = 329/482 (68%), Positives = 397/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y GF + I+ + GL+E +IR ISA KNEP+WMLEWRL +Y WL M
Sbjct: 3 EQIEQALERKYDAGFYSEIESETFESGLDESVIRRISAMKNEPEWMLEWRLKSYHAWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP ID+ + YY+APKS P+SLD+VDPELLRTYEKLGIP+ EQE+LAG
Sbjct: 63 EEPDWAHVDYPKIDYQAISYYSAPKSMKDKPKSLDEVDPELLRTYEKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSVVTTF+++L+++GVIF PISEA+ ++PDLVKKY+ +VVP DN+
Sbjct: 123 -----VAVDAVFDSVSVVTTFRDKLEEAGVIFCPISEAVQKYPDLVKKYIGSVVPRTDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFVYIPKG RCPMELSTYFRINE TGQFERTLI+ADEGSYVSYLEGC
Sbjct: 178 FAALNSAVFTDGSFVYIPKGTRCPMELSTYFRINEMNTGQFERTLIVADEGSYVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVA+D+A+IKYSTVQNWYPGD GKGGIYNFVTKRG +K
Sbjct: 238 TAPQRDENQLHAAVVELVAMDDAQIKYSTVQNWYPGDENGKGGIYNFVTKRGVAH-TNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+H+ KNT S I+
Sbjct: 297 ISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGRQQADTGTKMIHVGKNTKSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN YRG V + A +RNFT+CDSLLIG+ CGAHT PYIES+N S +EH
Sbjct: 357 SKGISAGNSNNAYRGLVQMGPRADGARNFTECDSLLIGDKCGAHTFPYIESRNPSAIVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SDE LF C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDEQLFLCQQRGLDTEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|295132096|ref|YP_003582772.1| cysteine desulfurase activator complex subunit SufB [Zunongwangia
profunda SM-A87]
gi|294980111|gb|ADF50576.1| cysteine desulfurase activator complex subunit SufB [Zunongwangia
profunda SM-A87]
Length = 481
Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats.
Identities = 321/489 (65%), Positives = 385/489 (78%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + ++++ +Y+YGF T+I+ D P GLNEDI+R IS KK EP+WM EWRL
Sbjct: 1 MAYTEDDLK--KELETKEYEYGFYTDIESDTFPVGLNEDIVRAISKKKEEPEWMTEWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W M++P WA + Y DF ++ YY+AP SLD+VDPELL T++KLGI I
Sbjct: 59 AFRAWEQMEEPEWANVHYKKPDFQNISYYSAPNKKPKYDSLDEVDPELLDTFKKLGISID 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAGV V V TTFK+ L + G+IF ISEAI EHP+LVKKY+ +V
Sbjct: 119 EQKKLAGVAVDVVMDSVS-----VTTTFKKTLAEKGIIFCSISEAIKEHPELVKKYIGSV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL+IADEGSY
Sbjct: 174 VPKKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVIADEGSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNW+PG GKGG++NFVTKRG
Sbjct: 234 VSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWFPGGKDGKGGVFNFVTKRGL 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+HL K
Sbjct: 294 C-EKNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFYSIAVTNNYQQADTGTKMVHLGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ A ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 353 NTRSTIISKGISAGKSQNSYRGLVQINPRADNARNFSQCDSLLMGNACGAHTFPYIEAKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 413 KTAKVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 473 EISLEGSVG 481
>gi|303235565|ref|ZP_07322172.1| FeS assembly protein SufB [Prevotella disiens FB035-09AN]
gi|302484012|gb|EFL47000.1| FeS assembly protein SufB [Prevotella disiens FB035-09AN]
Length = 481
Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats.
Identities = 304/488 (62%), Positives = 380/488 (77%), Gaps = 7/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
++ + VRK+ +Y++GF T++ D PKGLNED++R IS KK EP+W+L++RL A
Sbjct: 1 MSENNNNEYVRKVAEQKYEFGFTTDVHTDIIPKGLNEDVVRLISEKKGEPEWLLDFRLKA 60
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+R W TM+ P W + P ID+ + YYA P + ++DPEL +T++KLGIP+ E
Sbjct: 61 FRHWETMEMPKWPHLNLPEIDYQAISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLEE 118
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L+G VAVDA+ DSVSV TTFK++L + G+IF I EA+ EHP+LV++YL TVV
Sbjct: 119 RLALSG-----VAVDAIMDSVSVKTTFKKQLAEKGIIFCSIGEAVKEHPELVRQYLGTVV 173
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DNF AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLIIAD+ SYV
Sbjct: 174 PYKDNFTAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAMNTGQFERTLIIADDDSYV 233
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE+V L NAE+KYSTVQNWYPGD GKGG+ N VTKRGD
Sbjct: 234 SYLEGCTAPMRDENQLHAAIVEIVVLANAEVKYSTVQNWYPGDENGKGGVLNLVTKRGDL 293
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N Q+ D+GTKM+H+ KN
Sbjct: 294 RGKNSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNHQEADTGTKMIHMGKN 353
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S I+SKGISAG S N+YRG V V A ++RN++ CDSLL+G+ CGAHT PY++ N
Sbjct: 354 TKSTIISKGISAGKSQNSYRGLVRVTPNADNARNYSSCDSLLLGSTCGAHTFPYMDVHND 413
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEATTSKIS++ LFYC QRGIP E AI LIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 414 SAIVEHEATTSKISEDQLFYCNQRGIPMEDAIGLIVNGYAKDVLNKLPMEFAVEAQKLLS 473
Query: 482 ISLEGSVG 489
++LEG+VG
Sbjct: 474 VTLEGTVG 481
>gi|72383272|ref|YP_292627.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. NATL2A]
gi|72003122|gb|AAZ58924.1| Iron-regulated ABC transporter membrane component SufB
[Prochlorococcus marinus str. NATL2A]
Length = 480
Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats.
Identities = 307/481 (63%), Positives = 385/481 (80%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ V +I YKYGF T I+ +K PKGLNED+IR ISAKKNEP+++L++RL AY +WL M
Sbjct: 5 NTVEEIVSQPYKYGFITEIETEKIPKGLNEDVIRLISAKKNEPEFLLKFRLRAYEQWLKM 64
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K+P W+ + Y +D+ DL YY+APK + +SLD+VDP+LL T+EKLGIP+ EQ+ L+
Sbjct: 65 KEPDWSGLTYSKVDYQDLVYYSAPKQDIKKKSLDEVDPKLLETFEKLGIPLSEQKRLS-- 122
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVS+ TT+KE+L + GVIF ISEAI E+PDL++KY+ TVVP+ DNF+
Sbjct: 123 ---NVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAISEYPDLIEKYMGTVVPINDNFF 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGV CPMELS+YFRIN TGQFERTLIIA+E S VSYLEGCT
Sbjct: 180 AALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGDTGQFERTLIIAEESSSVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D N LHAAVVELVALDNA IKYSTVQNWY G+ +G GGIYNFVTKRG+CRG +SKI
Sbjct: 240 APMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGNEEGVGGIYNFVTKRGECRGKKSKI 299
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SW+Q+ETGSAITWKYPSC+L+G+ S GEFYSIA++N Q+ D+GTKM+H+ KNT S+IVS
Sbjct: 300 SWSQVETGSAITWKYPSCVLQGDNSIGEFYSIALTNNCQKADTGTKMIHIGKNTKSKIVS 359
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG VS+ A +RN++QCDS+LIG+ A+T PYI+SK N+EHE
Sbjct: 360 KGISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLIGDKASANTYPYIQSKQPQSNIEHE 419
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+T +IS++ LFY RGI E +++++V+GF +V +LPMEFA EA KL+ + LEGSV
Sbjct: 420 ASTCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDVFNELPMEFASEADKLLALKLEGSV 479
Query: 489 G 489
G
Sbjct: 480 G 480
>gi|260061110|ref|YP_003194190.1| cysteine desulfurase activator complex subunit SufB [Robiginitalea
biformata HTCC2501]
gi|88785242|gb|EAR16411.1| hypothetical protein RB2501_05915 [Robiginitalea biformata
HTCC2501]
Length = 481
Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats.
Identities = 329/471 (69%), Positives = 385/471 (81%), Gaps = 6/471 (1%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
Y+YGF T+I+ D PKGL+E+I+ IS KK EPDWM EWRL A+R W M +P WA I Y
Sbjct: 17 YEYGFYTDIESDTLPKGLSEEIVIAISKKKEEPDWMTEWRLEAFRHWKEMVEPEWANIHY 76
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
DF ++ YY+AP +SLD+VDPELL T++KLGIPI EQ+ LAG VAVD V
Sbjct: 77 KKPDFQNISYYSAPNKKPKYESLDEVDPELLDTFKKLGIPIEEQKKLAG-----VAVDFV 131
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
DSVSV TTFK+ L + G+IF ISEAI EHP+LV+KYL TVVP DNFYAALNSAVF+D
Sbjct: 132 MDSVSVATTFKKTLAEKGIIFCSISEAIKEHPELVRKYLGTVVPRKDNFYAALNSAVFSD 191
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++AD+GSYVSYLEGCTAP RDENQLH
Sbjct: 192 GSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVVADKGSYVSYLEGCTAPSRDENQLH 251
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVEL+ALD+AEIKYSTVQNW+PGD +GKGG+YNFVTKRG C +KISWTQ+ETGSA
Sbjct: 252 AAVVELIALDDAEIKYSTVQNWFPGDKEGKGGVYNFVTKRGLC-EKNAKISWTQVETGSA 310
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
ITWKYPSC+L+G+ S GEFYSIA++N QQ D+GTKM+HL NT S I+SKGISAG S N
Sbjct: 311 ITWKYPSCVLKGDNSIGEFYSIAVTNNHQQADTGTKMIHLGNNTRSTIISKGISAGRSQN 370
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+YRG V + R A ++RNF+QCDSLL+GN CGAHT PYIE+ NS+ +EHEATTSKI ++
Sbjct: 371 SYRGLVQIGRRAKNARNFSQCDSLLMGNECGAHTFPYIEANNSTAQIEHEATTSKIGEDQ 430
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 431 IFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLLEISLEGSVG 481
>gi|94501137|ref|ZP_01307660.1| Cysteine desulfurase activator SufB [Oceanobacter sp. RED65]
gi|94426713|gb|EAT11698.1| Cysteine desulfurase activator SufB [Oceanobacter sp. RED65]
Length = 482
Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats.
Identities = 335/482 (69%), Positives = 404/482 (83%), Gaps = 3/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y+ GF T+I+ D P GLNED+IRFIS KKNEP+W+LEWRL A+ W M
Sbjct: 3 EEINQYIKSEYEAGFVTDIESDTLPPGLNEDVIRFISGKKNEPEWLLEWRLKAFAAWQEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P+WA + YP DF L YY++PKS+ GP+SLD+VDPELLRTYEKLGIP+ EQE+LAG
Sbjct: 63 QEPNWAHVTYPKPDFQALSYYSSPKSMDDGPKSLDEVDPELLRTYEKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V+ VA+D VFDSVSV TTFKE+LK++GVIFM ISEA+ HP++VKKYL +VVP DNF
Sbjct: 123 VKN-NVAMDVVFDSVSVATTFKEKLKEAGVIFMSISEAVHHHPEIVKKYLGSVVPQKDNF 181
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAVF+DGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLI+ADEGS+VSYLEGC
Sbjct: 182 YAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIVADEGSHVSYLEGC 241
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS+GKGGIYNFVTKR +K
Sbjct: 242 TAPMRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSEGKGGIYNFVTKRAVAH-TNAK 300
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+SWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++N +QQ D+GTKM+HL KNT S I+
Sbjct: 301 VSWTQVETGSAVTWKYPSCVLKGDNSIGEFYSVALTNNYQQADTGTKMIHLGKNTKSTII 360
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S N YRG V ++ A +RNFTQCDSLLIG+ CGAHT PYIESK+ S +EH
Sbjct: 361 SKGISAGKSQNAYRGLVRMNPTAEGARNFTQCDSLLIGDKCGAHTFPYIESKHPSAVIEH 420
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTS +SD+ +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEGS
Sbjct: 421 EATTSTVSDDQMFLCQQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGS 480
Query: 488 VG 489
VG
Sbjct: 481 VG 482
>gi|304311761|ref|YP_003811359.1| FeS assembly protein [gamma proteobacterium HdN1]
gi|301797494|emb|CBL45714.1| FeS assembly protein [gamma proteobacterium HdN1]
Length = 482
Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats.
Identities = 328/490 (66%), Positives = 386/490 (78%), Gaps = 9/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E + + +Y GF TNI+ + P GLNED+I ISAKKNEP WML+WRL
Sbjct: 1 MANASEP---IADLIGREYAAGFVTNIESETIPPGLNEDVIATISAKKNEPQWMLDWRLE 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPI 119
AYR W M P WA +++P +DFD + YY+APKS P+SLD+VDPELL TYEKLGIP+
Sbjct: 58 AYRTWRAMTPPEWAHLKHPPVDFDAISYYSAPKSQKNRPKSLDEVDPELLATYEKLGIPL 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAGV V V TTF+EEL K GVIF PISEAI E+P+LVK+YL +
Sbjct: 118 HERAALAGVAVDVVFDSVS-----VATTFREELGKVGVIFCPISEAIREYPELVKEYLGS 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVPV DNFYAALNSAVF+DGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLII D+ +
Sbjct: 173 VVPVRDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIICDDDA 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP+RDENQLHAAVVELVA +NA+IKYSTVQNWYPGD G GGIYNFVTKRG
Sbjct: 233 YVSYLEGCTAPKRDENQLHAAVVELVARNNAQIKYSTVQNWYPGDENGDGGIYNFVTKRG 292
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G+ SKISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A+++ FQQ D+GTKM+H+
Sbjct: 293 LCAGVNSKISWTQVETGSAITWKYPSVVLRGDNSVGEFYSVALTHHFQQADTGTKMIHMG 352
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGISAG S NTYRG V V A +RN+TQCDSLLIG+ CGAHT PYIE++
Sbjct: 353 KNTRSTIVSKGISAGRSQNTYRGLVRVSPNAVGARNYTQCDSLLIGDKCGAHTFPYIENR 412
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS +EHEATTSK+SD+ LF C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL
Sbjct: 413 NSDSIVEHEATTSKVSDDQLFLCQQRGIDAEKAVSMIVNGFCKEVFRELPMEFAVEAGKL 472
Query: 480 IDISLEGSVG 489
+++SLEG+VG
Sbjct: 473 LEVSLEGAVG 482
>gi|159902622|ref|YP_001549966.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9211]
gi|159887798|gb|ABX08012.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
Length = 482
Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats.
Identities = 307/489 (62%), Positives = 379/489 (77%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + + YKYGF TNI+ +K KGLNED+IR IS KKNEPD++L++RL
Sbjct: 1 MSNTNSIAEVIA--TSNSYKYGFLTNIETEKIAKGLNEDVIRLISMKKNEPDFLLKFRLD 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR+WLTMK+P WA + YP ID+ ++ YYAAPK I +SLD+VDPE+L T+EKLGIP+
Sbjct: 59 AYRKWLTMKEPEWANLGYPKIDYQNIRYYAAPKDIEKKKSLDEVDPEILETFEKLGIPLS 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ L+ VAVDAVFDSVS+ TTFKE+L + GVIF ISEA+ E+P+L+++YL TV
Sbjct: 119 EQKRLS-----NVAVDAVFDSVSIATTFKEKLAEDGVIFCSISEAVQEYPELIERYLGTV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNF+AALNSAVF+DGSFV+IPKG+ CPMELS+YFRIN +GQFERTLI+A+ GS
Sbjct: 174 VPKNDNFFAALNSAVFSDGSFVFIPKGITCPMELSSYFRINSGDSGQFERTLIVAESGSS 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP D N LHAAVVEL+ALD+A IKYSTVQNWY GD G GGIYNFVTKRG
Sbjct: 234 VSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYSGDKNGVGGIYNFVTKRGQ 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG SKISW+Q+ETGSAITWKYPSC+L G S GEFYS+A++N Q D+GTKM+H+
Sbjct: 294 CRGKNSKISWSQVETGSAITWKYPSCVLLGANSTGEFYSVALTNNKQIADTGTKMIHIGP 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
T S+I+SKGIS G S N+YRG V + AA ++NF+QCDSLLIG+ A+T PYI+SK
Sbjct: 354 KTRSKIISKGISVGKSKNSYRGLVEIGTRAAGAKNFSQCDSLLIGDEAEANTYPYIQSKQ 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S N+EHEA+TSKIS++ LFY RGI E A++++VNGF R+V KLPMEFA EA L+
Sbjct: 414 SKSNIEHEASTSKISEDQLFYLQSRGISNEEAVSMMVNGFCRDVFNKLPMEFASEANNLL 473
Query: 481 DISLEGSVG 489
+ LEGSVG
Sbjct: 474 ALKLEGSVG 482
>gi|124024850|ref|YP_001013966.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. NATL1A]
gi|123959918|gb|ABM74701.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
Length = 480
Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats.
Identities = 307/481 (63%), Positives = 385/481 (80%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ V +I YKYGF T I+ +K PKGLNED+IR IS+KKNEP+++L++RL AY +WL M
Sbjct: 5 NTVEEIVSQPYKYGFITEIETEKIPKGLNEDVIRLISSKKNEPEFLLKFRLRAYEQWLKM 64
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K+P W+ + Y +D+ DL YYAAPK + +SLD+VDP+LL T+EKLGIP+ EQ+ L+
Sbjct: 65 KEPDWSGLTYSKVDYQDLVYYAAPKQDIKKKSLDEVDPKLLETFEKLGIPLSEQKRLS-- 122
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVS+ TT+KE+L + GVIF ISEAI E+PDL++KY+ TVVP+ DNF+
Sbjct: 123 ---NVAVDAVFDSVSIATTYKEKLAEHGVIFCSISEAISEYPDLIEKYMGTVVPLNDNFF 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGV CPMELS+YFRIN TGQFERTLIIA+E S VSYLEGCT
Sbjct: 180 AALNSAVFSDGSFVYIPKGVECPMELSSYFRINSGDTGQFERTLIIAEESSSVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D N LHAAVVELVALDNA IKYSTVQNWY G+ +G GGIYNFVTKRG+CRG +SKI
Sbjct: 240 APMFDTNTLHAAVVELVALDNASIKYSTVQNWYAGNEEGVGGIYNFVTKRGECRGKKSKI 299
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SW+Q+ETGSAITWKYPSC+L+G+ S GEFYSIA++N Q+ D+GTKM+H+ KNT S+IVS
Sbjct: 300 SWSQVETGSAITWKYPSCVLQGDNSIGEFYSIALTNNCQKADTGTKMIHIGKNTKSKIVS 359
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG VS+ A +RN++QCDS+LIG+ A+T PYI+SK N+EHE
Sbjct: 360 KGISAGKSKNSYRGLVSISPNAEGARNYSQCDSMLIGDKASANTYPYIQSKQPQSNIEHE 419
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+T +IS++ LFY RGI E +++++V+GF +V +LPMEFA EA KL+ + LEGSV
Sbjct: 420 ASTCRISEDQLFYLQSRGIDFEESVSMLVSGFCSDVFNELPMEFASEADKLLALKLEGSV 479
Query: 489 G 489
G
Sbjct: 480 G 480
>gi|15838077|ref|NP_298765.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa 9a5c]
gi|9106500|gb|AAF84285.1|AE003977_8 ABC transporter membrane protein [Xylella fastidiosa 9a5c]
Length = 485
Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats.
Identities = 318/487 (65%), Positives = 385/487 (79%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++D +Y+ GF T I+ D P GLNE IIR +SAKK+EP+WM EWRL AY
Sbjct: 6 ATPQNAEILERLDR-RYEAGFVTEIESDSLPPGLNEIIIRALSAKKHEPEWMTEWRLAAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 65 RHWLNMPMPEWAKLHIAPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVS+ TTF++EL + G+IF ISEAI EHPDL+++YL +VVP
Sbjct: 124 ARLAG-----VAVDAVFDSVSLGTTFRKELAEKGIIFCSISEAIQEHPDLIRQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
V DN++AALNSAVF+DGSFV+IPKGVRCPMELSTYFRIN TGQFERTLI+ +E +YVS
Sbjct: 179 VRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVA ++AEIKYSTVQNWYPGD G+GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK+ WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A++ QQ D+GTKM+H+ K T
Sbjct: 299 GARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V + R A +RN TQCDSLLIG CGAHT PYIE K+ +
Sbjct: 359 KSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIGKQCGAHTFPYIEVKHPN 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI EE A+++IV+GF ++V ++LPMEFAVEA+KL+DI
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDI 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|325953988|ref|YP_004237648.1| FeS assembly protein SufB [Weeksella virosa DSM 16922]
gi|323436606|gb|ADX67070.1| FeS assembly protein SufB [Weeksella virosa DSM 16922]
Length = 485
Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats.
Identities = 328/491 (66%), Positives = 390/491 (79%), Gaps = 8/491 (1%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + T D +R+ +Y++G+ET ++ + P GLNEDI+R IS KK EP+WM EWR
Sbjct: 1 MSNTKYTEDDLREDLAKPREYEFGWETEMEYEDFPIGLNEDIVRAISKKKEEPEWMTEWR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A+R W M +P WA I Y DF + YYAAPK SLD+VDPELLRT+E+LGI
Sbjct: 61 LEAFRAWQKMTEPEWANIHYEKPDFQAIRYYAAPKVKKELASLDEVDPELLRTFERLGIS 120
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ EQ+ L G VA+DAV DSVSV TTF+E L + G+IFM ISEAI EHP+LV+KY+
Sbjct: 121 LDEQKRLTG-----VAIDAVIDSVSVKTTFQETLAEKGIIFMSISEAIKEHPELVRKYIG 175
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
VVP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN GTGQFERTL+IADEG
Sbjct: 176 KVVPPTDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSAGTGQFERTLLIADEG 235
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
SYVSYLEGCTAP RDENQLHAAVVEL+ +++AEIKYSTVQNWYPGD GKGG++NFVTKR
Sbjct: 236 SYVSYLEGCTAPMRDENQLHAAVVELIVMEDAEIKYSTVQNWYPGDEHGKGGVFNFVTKR 295
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C +K+SWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM H+
Sbjct: 296 AVC-EKNAKVSWTQVETGSAVTWKYPSCILKGDNSVGEFYSIAVTNNYQQADTGTKMYHI 354
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT S I+SKGISAG S N+YRG V +++ A+ +RNFTQCDSLL+GN CGAHT PYIE
Sbjct: 355 GKNTRSTIISKGISAGRSQNSYRGLVKINKNASGARNFTQCDSLLMGNECGAHTFPYIEM 414
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+NS+ LEHEATTSKI ++ LFYC QRGI E AIALIVNGF REVL KLPMEFAVEA+K
Sbjct: 415 ENSTAKLEHEATTSKIGEDQLFYCNQRGIDTEKAIALIVNGFSREVLDKLPMEFAVEAKK 474
Query: 479 LIDISLEGSVG 489
L++ISLEGSVG
Sbjct: 475 LLEISLEGSVG 485
>gi|301166542|emb|CBW26118.1| putative ABC transportsystem, membrane protein [Bacteriovorax
marinus SJ]
Length = 475
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 309/478 (64%), Positives = 389/478 (81%), Gaps = 5/478 (1%)
Query: 12 RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+I ++YKYGF T+I+ ++ PKGLNE+I+R IS KK EP W+LE+RL A++ W TMK+P
Sbjct: 3 EEILQEEYKYGFYTDIETEEFPKGLNEEIVRLISKKKEEPQWLLEYRLKAFKLWKTMKEP 62
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
+WA++ PAIDF+DLYYYAAPK SLD+VDPELL T+EKLGIP+ EQ+ ++G
Sbjct: 63 NWAKLDIPAIDFEDLYYYAAPKKKEALSSLDEVDPELLATFEKLGIPLSEQKRISG---- 118
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
VAVDAVFDSVSV TT+KE+L+K GVIF ISEA+ ++P+LVKKYL TVVP DNFYAAL
Sbjct: 119 -VAVDAVFDSVSVATTYKEDLEKVGVIFCSISEAVKDYPELVKKYLGTVVPPADNFYAAL 177
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
NSAVF+DGSFVYIP+GV CPM+LSTYFRIN K TGQFERTLI+A++GS+V+YLEGCTAPQ
Sbjct: 178 NSAVFSDGSFVYIPEGVTCPMDLSTYFRINAKETGQFERTLIVAEKGSFVNYLEGCTAPQ 237
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
RDENQLHAA+VE+VALD+AE+KYSTVQNWY G+ +G GGIYNFVTKRG+C G SKISWT
Sbjct: 238 RDENQLHAAIVEIVALDDAEVKYSTVQNWYAGNKEGIGGIYNFVTKRGNCLGRNSKISWT 297
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q+E GSAITWKYPSC L G+ S G FYS+A++N Q D+GTKM+H+ KNT S I+SKGI
Sbjct: 298 QVEAGSAITWKYPSCNLIGDNSQGAFYSVALTNNKMQADTGTKMVHIGKNTKSTIISKGI 357
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
SA S N YRG V V A +RN++QCDS+L+G+ C A+T PYI+ KN++ +EHEA+T
Sbjct: 358 SAEQSENNYRGLVKVMPSATGARNYSQCDSMLVGDKCAANTFPYIDVKNNTATVEHEAST 417
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SKIS++ LFY QRG+ E I++IVNGF +V ++LP+EF+VEA KLI++ LE S+G
Sbjct: 418 SKISEDQLFYLQQRGMDMEKCISMIVNGFCSDVFKELPLEFSVEAVKLIEMKLENSIG 475
>gi|288928617|ref|ZP_06422463.1| FeS assembly protein SufB [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329601|gb|EFC68186.1| FeS assembly protein SufB [Prevotella sp. oral taxon 317 str.
F0108]
Length = 483
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 304/490 (62%), Positives = 386/490 (78%), Gaps = 8/490 (1%)
Query: 1 MVAVRETVDK-VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V+ + VR + +Y++GF T+++ D KGLNED++R IS+KKNEP+W+L +RL
Sbjct: 1 MEEVKNEKNAYVRSVAEQKYEFGFTTDVETDIIEKGLNEDVVRLISSKKNEPEWLLAFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A+ W T+K P+WA + P ID+ D+ YYA P + ++DPEL +T++KLGIP+
Sbjct: 61 KAFNHWKTLKQPNWAHVNLPEIDYQDISYYADPMAKKPAN--KELDPELEKTFDKLGIPL 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ +L G VAVDA+ DSVSV TTFKE+L + GVIF I EA+ EHPDLV++YL +
Sbjct: 119 EERLVLGG-----VAVDAIMDSVSVKTTFKEKLAEKGVIFCSIGEAVQEHPDLVQQYLGS 173
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNF+AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +
Sbjct: 174 VVPYSDNFFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDT 233
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG++N VTKRG
Sbjct: 234 YVSYLEGCTAPMRDENQLHAAIVEIIVKDNAEVKYSTVQNWYPGDEHGKGGVFNLVTKRG 293
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
D RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +QQ D+GTKM+H+
Sbjct: 294 DLRGVNSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNYQQADTGTKMIHMG 353
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++
Sbjct: 354 KNTKSTIISKGISAGRSQNSYRGLVRATANADNARNYSSCDSLLLGDKCGAHTFPYMDIH 413
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEATTSKIS+ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL
Sbjct: 414 NDTAIIEHEATTSKISEAQLFYCNQRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEAQKL 473
Query: 480 IDISLEGSVG 489
+ +SLEG+VG
Sbjct: 474 LSVSLEGTVG 483
>gi|119945240|ref|YP_942920.1| cysteine desulfurase activator complex subunit SufB [Psychromonas
ingrahamii 37]
gi|119863844|gb|ABM03321.1| FeS assembly protein SufB [Psychromonas ingrahamii 37]
Length = 483
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 314/490 (64%), Positives = 397/490 (81%), Gaps = 9/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M R+ +D+ +Y +GF T+++ D P GL+E +IR ISA+K+EPD+ML+WRL
Sbjct: 2 MAKSRQNLDR---FVGSEYPHGFVTDLETDSLPAGLSETVIRQISARKHEPDFMLQWRLK 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPI 119
AY+ WLT+K P W+++ YP I+FD++ +Y+APK+ GP+SLD + PE+L+TYEKLGIP+
Sbjct: 59 AYQHWLTLKVPKWSKLHYPPINFDEIVFYSAPKTAADGPKSLDQIAPEILQTYEKLGIPL 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG VAVDAVFDSVSV TTFK++L GVIF S+A+ EHP+LVK+YL T
Sbjct: 119 HERPQLAG-----VAVDAVFDSVSVATTFKKKLAAVGVIFCSFSDAVQEHPELVKRYLGT 173
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN+YAALN+AVF+DGSF Y+PKGVRCPMELSTYFRIN TGQFERTLI+ +EG+
Sbjct: 174 VVPYTDNYYAALNAAVFSDGSFCYVPKGVRCPMELSTYFRINSLNTGQFERTLIVVEEGA 233
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDE+QLHAAVVEL+ALD+ EIKY+TVQNWYPGD +GKGGIYNFVTKRG
Sbjct: 234 YVSYLEGCTAPIRDEHQLHAAVVELIALDDGEIKYATVQNWYPGDKKGKGGIYNFVTKRG 293
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
CRG SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 294 LCRGHHSKISWTQVETGSAITWKYPSVILQGDNSRGEFYSVALTNNYQQADTGTKMIHIG 353
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT+S I+SKGISAG +N YRG V + A ++RN++QCDSLL+G NC AHT PYIE K
Sbjct: 354 KNTSSTIISKGISAGHGSNAYRGLVKIGPKAVNARNYSQCDSLLLGENCAAHTFPYIEVK 413
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS+ +EHEA+TSKISD+ LFYC+QRGI +E +A+I+NGF + V +KLPMEFAVEAQ L
Sbjct: 414 NSTAKVEHEASTSKISDQQLFYCMQRGISQEDTVAMIINGFCKTVFRKLPMEFAVEAQAL 473
Query: 480 IDISLEGSVG 489
+++SLEG G
Sbjct: 474 MEVSLEGCTG 483
>gi|170730003|ref|YP_001775436.1| cysteine desulfurase activator complex subunit SufB [Xylella
fastidiosa M12]
gi|167964796|gb|ACA11806.1| ABC transporter membrane protein [Xylella fastidiosa M12]
Length = 485
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 317/487 (65%), Positives = 383/487 (78%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A + + + ++D Y+ GF T I+ D P GLNE IIR +SAKK+EP+WM EWRL AY
Sbjct: 6 ATPQNAEILERLDR-HYEAGFVTQIESDSLPPGLNETIIRALSAKKHEPEWMTEWRLAAY 64
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R WL M P WA++ IDF L YY+APK SLD+V ELL TY+KLG+P+ E+
Sbjct: 65 RHWLNMPMPEWAKLHIAPIDFQALSYYSAPKG-PKYASLDEVPKELLDTYDKLGVPLHER 123
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG VAVDAVFDSVS+ TTF++EL + G+IF ISEAI EHPDL+++YL +VVP
Sbjct: 124 ARLAG-----VAVDAVFDSVSLGTTFRKELAEKGIIFCSISEAIQEHPDLIRQYLGSVVP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
V DN++AALNSAVF+DGSFV+IPK VRCPMELSTYFRIN TGQFERTLI+ +E +YVS
Sbjct: 179 VRDNYFAALNSAVFSDGSFVFIPKSVRCPMELSTYFRINAGHTGQFERTLIVCEEQAYVS 238
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVELVA ++AEIKYSTVQNWYPGD G+GGIYNFVTKR +CR
Sbjct: 239 YLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNWYPGDEAGRGGIYNFVTKRAECR 298
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSK+ WTQ+ETGSAITWKYPSC+L G+ S GEF+S+A++ QQ D+GTKM+H+ K T
Sbjct: 299 GARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEFHSVALTRHHQQADTGTKMIHIGKRT 358
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+IVSKGISAG NTYRG V + R A +RN TQCDSLLIG CGAHT PYIE K+ +
Sbjct: 359 KSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHTQCDSLLIGKQCGAHTFPYIEVKHPN 418
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKISD+ LFYC RGI EE A+++IV+GF ++V ++LPMEFAVEA+KL+DI
Sbjct: 419 ATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIVDGFCKQVFRELPMEFAVEAKKLLDI 478
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 479 SLEGSVG 485
>gi|87301373|ref|ZP_01084214.1| FeS assembly protein SufB [Synechococcus sp. WH 5701]
gi|87284341|gb|EAQ76294.1| FeS assembly protein SufB [Synechococcus sp. WH 5701]
Length = 480
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 298/489 (60%), Positives = 379/489 (77%), Gaps = 9/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + V + YKYGF T+I+ DK KGL+ED++R IS+KK+EP ++L++RL
Sbjct: 1 MSSTTS----VGDLVSQPYKYGFVTDIETDKIDKGLSEDVVRLISSKKDEPQFLLDFRLR 56
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR+WL M++P WA + +PAID+ ++ YYAAP+ SLD+VDP+LL T++KLGIP+
Sbjct: 57 AYRQWLRMEEPDWAALGHPAIDYQEMIYYAAPRQQEKKASLDEVDPKLLETFDKLGIPLS 116
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ L+ VAVDAVFDSVS+ TT++E+L + GVIF ISEA+ +HP+L+++YL TV
Sbjct: 117 EQKRLS-----NVAVDAVFDSVSIATTYREKLAEHGVIFCSISEAVKDHPELIERYLGTV 171
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNF+AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+
Sbjct: 172 VPSNDNFFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGAS 231
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG
Sbjct: 232 VSYLEGCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGH 291
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG RS ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+
Sbjct: 292 CRGDRSHISWTQVETGSAITWKYPSCVLQGAHSVGEFYSVALTNNLQQADTGTKMVHVGP 351
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T S IVSKGISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+
Sbjct: 352 HTRSTIVSKGISAGHSSNSYRGLVQIGPKARGARNYSQCDSMLIGDQAAANTYPYIRSQQ 411
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++EHEA+T +IS + LFY RGI E A++++V+GF R+V +LPMEFA EA KL+
Sbjct: 412 PEASVEHEASTCRISADQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLL 471
Query: 481 DISLEGSVG 489
+ LEGSVG
Sbjct: 472 ALKLEGSVG 480
>gi|110834726|ref|YP_693585.1| cysteine desulfurase activator complex subunit SufB [Alcanivorax
borkumensis SK2]
gi|110647837|emb|CAL17313.1| permease component of ABC transporter for Fe-S cluster assmb
[Alcanivorax borkumensis SK2]
Length = 479
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 330/481 (68%), Positives = 393/481 (81%), Gaps = 7/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ K+ Y+ GF T + + P GL+E++IRF+SAKK EP+WMLEWRL +YR+W M
Sbjct: 5 ELDKLIRSNYEAGFTTTVDTETLPPGLSEEVIRFLSAKKGEPEWMLEWRLDSYRKWQEMP 64
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P WA + +P IDF+++ YY+ PKS P+SLD+VDPELL TYEKLGIP+ EQE+LAG
Sbjct: 65 TPGWAHLHHPPIDFNEVSYYSKPKSLDDAPKSLDEVDPELLATYEKLGIPLHEQEMLAG- 123
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVD VFDS SV TTFKE+L ++GVIF ISEAI E+P+LV+KY+ +VVP GDNFY
Sbjct: 124 ----VAVDVVFDSSSVFTTFKEKLWEAGVIFCSISEAIQEYPELVQKYMGSVVPKGDNFY 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGVRCPMELSTYFRINE TGQFERTLIIADEGSYVSYLEGCT
Sbjct: 180 AALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLIIADEGSYVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAAVVELVAL AEIKYSTVQNWYPGD GKGGIYNFVTKRG SKI
Sbjct: 240 APQRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDENGKGGIYNFVTKRGIAH-DNSKI 298
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+S
Sbjct: 299 SWTQVETGSAITWKYPSVILRGDNSIGEFYSVALTRHMQQADTGTKMIHLGKNTKSTIIS 358
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S+N+YRG V + A ++RNFTQCDSLL+G+ CGAHT PYIESKN + +EHE
Sbjct: 359 KGISAGRSSNSYRGLVRISPRAENARNFTQCDSLLLGDTCGAHTFPYIESKNPTATIEHE 418
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSK+SD+ +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEG+V
Sbjct: 419 ATTSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAV 478
Query: 489 G 489
G
Sbjct: 479 G 479
>gi|208779237|ref|ZP_03246583.1| FeS assembly protein SufB [Francisella novicida FTG]
gi|208745037|gb|EDZ91335.1| FeS assembly protein SufB [Francisella novicida FTG]
Length = 481
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 336/482 (69%), Positives = 402/482 (83%), Gaps = 4/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF TNI+ + GLNED+IR ISA+KNEP+++LEWRL AY +WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNEPEFLLEWRLKAYHKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + +P IDF + YY++PKS P+SLD+VDPE++ TY KLGIP+ EQE+LAG
Sbjct: 63 KSPKWADLNHPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--RNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGC
Sbjct: 181 FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCH-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + AA++RNF+QCDSLLIG+NCGAHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEAQKL+++SLEG+
Sbjct: 420 EATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGA 479
Query: 488 VG 489
VG
Sbjct: 480 VG 481
>gi|11467362|ref|NP_043219.1| putative ABC transporter [Cyanophora paradoxa]
gi|1351747|sp|P48260|YCF24_CYAPA RecName: Full=UPF0051 protein ycf24
gi|1016163|gb|AAA81250.1| ABC transporter subunit [Cyanophora paradoxa]
Length = 486
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 313/491 (63%), Positives = 380/491 (77%), Gaps = 7/491 (1%)
Query: 1 MVAVRETVDK-VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
MV + + + + YKYG +++ KGL E+ IR IS KKNEP +MLE+RL
Sbjct: 1 MVNTQSPKNSGLENLVNQPYKYGLPLIFEIETISKGLTEETIRLISEKKNEPQFMLEFRL 60
Query: 60 LAYRRWLTMK-DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
AYR+WL M +P WA + YP I++ D+ YY+APK QSLD+VDP LL T+EKLGIP
Sbjct: 61 QAYRKWLEMSNEPEWAHLNYPKINYQDMVYYSAPKQKKKLQSLDEVDPTLLETFEKLGIP 120
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ EQ+ LA VAVDA+FDSVSV TTFKEEL K GVIF PISEA+ ++PDL+KKYL
Sbjct: 121 LTEQKRLA-----NVAVDAIFDSVSVATTFKEELAKEGVIFCPISEAVQKYPDLIKKYLG 175
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+VV DN+++ LN+AVF+DGSF YIPK VRCP+ELSTYFRIN +GQFERTLI+ADEG
Sbjct: 176 SVVSTSDNYFSCLNAAVFSDGSFCYIPKNVRCPLELSTYFRINNGESGQFERTLIVADEG 235
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
SYVSYLEGCTAPQ D NQLHAAVVELVALDNAEIKYSTVQNWY GD GKGGIYNFVTKR
Sbjct: 236 SYVSYLEGCTAPQFDTNQLHAAVVELVALDNAEIKYSTVQNWYAGDENGKGGIYNFVTKR 295
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G C G SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 296 GLCAGKNSKISWTQVETGSAITWKYPSCVLLGDNSIGEFYSVALTNRYQQADTGTKMIHI 355
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT SRI+SKGISAG S N+YRG V + A +RN++QCDSLLIG+N A+T P+++
Sbjct: 356 GKNTRSRIISKGISAGHSQNSYRGLVKIGPKAVGARNYSQCDSLLIGDNSQANTFPHLQI 415
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
KN + +EHEA+TSKI +E +FY LQRGI E AI+LI++GF REV LPMEFA+EA K
Sbjct: 416 KNPTAKVEHEASTSKIGEEQIFYFLQRGINAEEAISLIISGFCREVFNNLPMEFALEADK 475
Query: 479 LIDISLEGSVG 489
L+ + LEGSVG
Sbjct: 476 LLGLKLEGSVG 486
>gi|87125292|ref|ZP_01081138.1| FeS assembly protein SufB [Synechococcus sp. RS9917]
gi|86167061|gb|EAQ68322.1| FeS assembly protein SufB [Synechococcus sp. RS9917]
Length = 480
Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats.
Identities = 298/484 (61%), Positives = 374/484 (77%), Gaps = 6/484 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T+I DK KGL+ED++R ISAKK EP+++L +RL AYR WL
Sbjct: 2 TSVSTRDLVSQPYKYGFVTDIATDKIAKGLSEDVVRLISAKKGEPEFLLNFRLKAYRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS-LDDVDPELLRTYEKLGIPIREQEIL 125
T+++P WA + YP I++ D+ YYAAPK +S LD+VDP+LL T+EKLGIP+ EQ+ L
Sbjct: 62 TLEEPDWAALGYPPINYQDIIYYAAPKQPQEKKSSLDEVDPKLLETFEKLGIPLNEQKRL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ VAVDAVFDSVS+ TT+KE+L + GV+F +EA+ EHP+L+++YL TVV D
Sbjct: 122 S-----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFAEAVKEHPELIERYLGTVVSSND 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYLE
Sbjct: 177 NYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD G GGIYNFVTKRG CRG R
Sbjct: 237 GCTAPMFDTNQLHAAVVELVALDDASIKYSTVQNWYAGDENGVGGIYNFVTKRGQCRGAR 296
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
S+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S
Sbjct: 297 SRISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADTGTKMVHVGPRTRST 356
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSKGISAG S+N+YRG V + A +RN++QCDS+LIG+ A+T PYI S+ +
Sbjct: 357 IVSKGISAGRSSNSYRGLVQMAPSAKGARNYSQCDSMLIGDQAAANTYPYIRSQQPQAAI 416
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LE
Sbjct: 417 EHEASTCRISEDQLFYLQSRGIGFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLE 476
Query: 486 GSVG 489
GSVG
Sbjct: 477 GSVG 480
>gi|88799894|ref|ZP_01115466.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
gi|88777325|gb|EAR08528.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
Length = 479
Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats.
Identities = 334/483 (69%), Positives = 400/483 (82%), Gaps = 8/483 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++V++ +Y+ GF TN++ P GLNED+IR ISAKK EP+W+LEWRL AYR W M
Sbjct: 3 EEVKQYIKSEYEAGFTTNVESATIPPGLNEDVIRLISAKKQEPEWLLEWRLKAYRAWEQM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVG--PQSLDDVDPELLRTYEKLGIPIREQEILA 126
++P WA + YP DF L YY++PKS+ P+SLD+VDPELL TYEKLGIP+ EQE+LA
Sbjct: 63 EEPDWAHVTYPKPDFQALSYYSSPKSMEENRPKSLDEVDPELLATYEKLGIPVHEQEVLA 122
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G VAVD VFDSVSV TTF+++LK +GVIF PISEA+ E+P+LVKKYL +VVP DN
Sbjct: 123 G-----VAVDMVFDSVSVGTTFRQKLKDAGVIFCPISEAVHEYPELVKKYLGSVVPQRDN 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+YAALNSAVF+DGSFVYIPKGVRCPMELSTYFRINE TGQFERTLIIADE S+VSYLEG
Sbjct: 178 YYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEAKTGQFERTLIIADESSHVSYLEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD++GKGGIYNFVTKRG RS
Sbjct: 238 CTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGIAH-TRS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A+++ QQ D+GTKM+HL KNT S I
Sbjct: 297 KISWTQVETGSAVTWKYPSCILKGDDSIGEFYSVALTSNHQQADTGTKMIHLGKNTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+SKGISA S NTYRG V ++ GA+ +RNFTQCDSLLIG+ GAHT PYIESKN S +E
Sbjct: 357 ISKGISAMKSENTYRGLVRMNPGASGARNFTQCDSLLIGDQSGAHTFPYIESKNPSAVVE 416
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEATTSK+SD+ +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEG
Sbjct: 417 HEATTSKVSDDQMFLCQQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEG 476
Query: 487 SVG 489
+VG
Sbjct: 477 AVG 479
>gi|315636033|ref|ZP_07891292.1| FeS assembly protein SufB [Arcobacter butzleri JV22]
gi|315479689|gb|EFU70363.1| FeS assembly protein SufB [Arcobacter butzleri JV22]
Length = 478
Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats.
Identities = 319/481 (66%), Positives = 386/481 (80%), Gaps = 7/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++ + +YK GFET +Q D KGLNED+IR ISAKK+EP W+L++RL AY +WL M
Sbjct: 5 QQIHDVINKEYKLGFETLVQSDTFEKGLNEDVIRAISAKKDEPSWLLDFRLKAYEKWLKM 64
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++P+WA ++YP ID+ D+ YY+APK SLD+VDPE+L+TYEKLGIP+ EQ+ LAG
Sbjct: 65 EEPTWANLKYPKIDYQDIAYYSAPK--KALNSLDEVDPEILKTYEKLGIPLEEQKQLAG- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TT++EEL+K G+IF ISEA ++P+LVK YL++VVP DN++
Sbjct: 122 ----VAVDAVFDSVSVKTTYQEELEKLGIIFCSISEAAHKYPELVKNYLASVVPTVDNYF 177
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
+ LNSAVFTDGSFVYIP RCPMELSTYFRIN TGQFERTLII DE SYVSY EGC+
Sbjct: 178 SCLNSAVFTDGSFVYIPPNTRCPMELSTYFRINALNTGQFERTLIICDENSYVSYNEGCS 237
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDE QLHAAVVEL AL NA IKYST+QNW+PGD +GKGGI NFVTKRG C+G SKI
Sbjct: 238 APTRDERQLHAAVVELCALKNAHIKYSTIQNWFPGDDKGKGGILNFVTKRGLCKGDNSKI 297
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+AI++ QQ D+GTKM+HL KNT S I+S
Sbjct: 298 SWTQVETGSAITWKYPSCVLQGDNSVGEFYSVAIASKSQQADTGTKMIHLGKNTKSTIIS 357
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISA N YRG V V + A ++RN ++CDSLLIG+ C AHT PY E +NSS N+EHE
Sbjct: 358 KGISAMHGVNAYRGLVKVGKNAQNARNISECDSLLIGHKCQAHTYPYHEIRNSSANIEHE 417
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKISDE LFY QRGI EE AIA+IVNGF +EVL++LPMEFA EA++L++ISLEGSV
Sbjct: 418 ATTSKISDEQLFYLNQRGIDEENAIAMIVNGFCKEVLKELPMEFAAEAKELLNISLEGSV 477
Query: 489 G 489
G
Sbjct: 478 G 478
>gi|157736862|ref|YP_001489545.1| Fe-S assembly ABC transporter, permease protein [Arcobacter
butzleri RM4018]
gi|157698716|gb|ABV66876.1| Fe-S assembly ABC transporter, permease protein [Arcobacter
butzleri RM4018]
Length = 489
Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats.
Identities = 319/481 (66%), Positives = 386/481 (80%), Gaps = 7/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++ + +YK GFET +Q D KGLNED+IR ISAKK+EP W+L++RL AY +WL M
Sbjct: 16 QQIHDVINKEYKLGFETLVQSDTFEKGLNEDVIRAISAKKDEPSWLLDFRLKAYEKWLKM 75
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++P+WA ++YP ID+ D+ YY+APK SLD+VDPE+L+TYEKLGIP+ EQ+ LAG
Sbjct: 76 EEPTWANLKYPKIDYQDIAYYSAPK--KALNSLDEVDPEILKTYEKLGIPLEEQKQLAG- 132
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TT++EEL+K G+IF ISEA ++P+LVK YL++VVP DN++
Sbjct: 133 ----VAVDAVFDSVSVKTTYQEELEKLGIIFCSISEAAHKYPELVKNYLASVVPTVDNYF 188
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
+ LNSAVFTDGSFVYIP RCPMELSTYFRIN TGQFERTLII DE SYVSY EGC+
Sbjct: 189 SCLNSAVFTDGSFVYIPPNTRCPMELSTYFRINALNTGQFERTLIICDENSYVSYNEGCS 248
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDE QLHAAVVEL AL NA IKYST+QNW+PGD +GKGGI NFVTKRG C+G SKI
Sbjct: 249 APTRDERQLHAAVVELCALKNAHIKYSTIQNWFPGDDKGKGGILNFVTKRGLCKGDNSKI 308
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+AI++ QQ D+GTKM+HL KNT S I+S
Sbjct: 309 SWTQVETGSAITWKYPSCVLQGDNSVGEFYSVAIASKSQQADTGTKMIHLGKNTKSTIIS 368
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISA N YRG V V + A ++RN ++CDSLLIG+ C AHT PY E +NSS N+EHE
Sbjct: 369 KGISAMHGVNAYRGLVKVGKNAQNARNISECDSLLIGHKCQAHTYPYHEIRNSSANIEHE 428
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKISDE LFY QRGI EE AIA+IVNGF +EVL++LPMEFA EA++L++ISLEGSV
Sbjct: 429 ATTSKISDEQLFYLNQRGIDEENAIAMIVNGFCKEVLKELPMEFAAEAKELLNISLEGSV 488
Query: 489 G 489
G
Sbjct: 489 G 489
>gi|89256549|ref|YP_513911.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica LVS]
gi|115314980|ref|YP_763703.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica OSU18]
gi|156502668|ref|YP_001428733.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167010974|ref|ZP_02275905.1| FeS assembly protein SufB [Francisella tularensis subsp. holarctica
FSC200]
gi|254367873|ref|ZP_04983893.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
gi|254369465|ref|ZP_04985477.1| ABC transporter [Francisella tularensis subsp. holarctica FSC022]
gi|290953095|ref|ZP_06557716.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica URFT1]
gi|295313701|ref|ZP_06804283.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. holarctica URFT1]
gi|89144380|emb|CAJ79669.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica LVS]
gi|115129879|gb|ABI83066.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Francisella tularensis subsp. holarctica OSU18]
gi|134253683|gb|EBA52777.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
gi|156253271|gb|ABU61777.1| FeS assembly protein SufB [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157122415|gb|EDO66555.1| ABC transporter [Francisella tularensis subsp. holarctica FSC022]
Length = 481
Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats.
Identities = 335/482 (69%), Positives = 400/482 (82%), Gaps = 4/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF TNI+ + GLNED+IR ISA+KNEP+++LEWRL AY +WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNEPEFLLEWRLKAYHKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + YP IDF + YY++PKS P+SLD+VDPE++ TY KLGIP+ EQE+L G
Sbjct: 63 KSPKWADLNYPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEMLVG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--RNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGC
Sbjct: 181 FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCH-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + AA++RNF+QCDSLLIG+NCGAHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEA KL+++SLEG+
Sbjct: 420 EATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAHKLMEVSLEGA 479
Query: 488 VG 489
VG
Sbjct: 480 VG 481
>gi|86140878|ref|ZP_01059437.1| hypothetical protein MED217_17040 [Leeuwenhoekiella blandensis
MED217]
gi|85832820|gb|EAQ51269.1| hypothetical protein MED217_17040 [Leeuwenhoekiella blandensis
MED217]
Length = 481
Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats.
Identities = 320/489 (65%), Positives = 388/489 (79%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + ++ +++ +YKYGF T+I+ + P GLNEDI+R IS KK EP+WM EWR+
Sbjct: 1 MAYTEDDLE--KELATKEYKYGFYTDIESETFPVGLNEDIVRAISKKKEEPEWMTEWRIE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W T+++P WA + Y +F ++ YY+AP SLD+VDPELL T+++LGI +
Sbjct: 59 AFRHWQTLEEPEWANVHYEKPNFQNISYYSAPSKKPKYDSLDEVDPELLDTFKRLGISLD 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAGV V V TTFK+ L + G+IF ISEAI EHP+LVKKY+ TV
Sbjct: 119 EQKKLAGVAVDVVMDSVS-----VTTTFKKTLAEKGIIFCSISEAIKEHPELVKKYIGTV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++ADEGSY
Sbjct: 174 VPKTDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVVADEGSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNWYPG+ +GKGG+YNFVTKRG
Sbjct: 234 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWYPGNDEGKGGVYNFVTKRGL 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N FQQ D+GTKM+HL K
Sbjct: 294 C-EKNAKISWTQVETGSAVTWKYPSCVLKGDNSIGEFYSIAVTNNFQQADTGTKMIHLGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ A ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 353 NTKSTIISKGISAGQSQNSYRGLVQINGRAENARNFSQCDSLLMGNKCGAHTFPYIEAKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 413 KSAKVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 473 EISLEGSVG 481
>gi|228471850|ref|ZP_04056621.1| FeS assembly protein SufB [Capnocytophaga gingivalis ATCC 33624]
gi|228276780|gb|EEK15483.1| FeS assembly protein SufB [Capnocytophaga gingivalis ATCC 33624]
Length = 489
Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats.
Identities = 318/476 (66%), Positives = 383/476 (80%), Gaps = 3/476 (0%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP-SWA 74
+YKYGF T+I+ D PKGLNE+++ +S KKNEP WM +WR+ A+R W M +P WA
Sbjct: 15 NSEYKYGFYTDIESDTFPKGLNEEVVIALSKKKNEPQWMTDWRVEAFRIWQAMPEPPHWA 74
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK-V 133
I++ DF D+ YY+APK SLD+VDP+LL T++KLGI + EQ+ L GV+ V
Sbjct: 75 NIKFETPDFQDIAYYSAPKKKPKLNSLDEVDPQLLETFQKLGISLEEQKRLTGVEDKPAV 134
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D V DSVSV TTF++ L + G+IF ISEAI +HPDLV+KYL TVVP DNFYAALNS
Sbjct: 135 AMDVVMDSVSVATTFQKTLAEKGIIFCAISEAIQKHPDLVRKYLGTVVPKTDNFYAALNS 194
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVFTDGSF Y+PKGVRCPMELSTYFRIN+ GTGQFERTL+I DEG+YVSYLEGCTAP+RD
Sbjct: 195 AVFTDGSFCYVPKGVRCPMELSTYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKRD 254
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
ENQLHAAVVEL+A++ EIKYSTVQNW+PGD +GKGG+YNFVTKR +KISWTQ+
Sbjct: 255 ENQLHAAVVELIAMEGGEIKYSTVQNWFPGDKEGKGGVYNFVTKRALA-EKNAKISWTQV 313
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
ETGSAITWKYPS +L+G+ S GEFYSIA++N FQQ D+GTKM+HL NT S I+SKGISA
Sbjct: 314 ETGSAITWKYPSVVLKGDNSIGEFYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISA 373
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G S N+YRG V V A ++RNF+QCDSLL+GNNCGAHT PYIE+KN + +EHEATTSK
Sbjct: 374 GRSQNSYRGLVKVVPNAKNARNFSQCDSLLMGNNCGAHTFPYIEAKNPTAQIEHEATTSK 433
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
I ++ +FYC QRGI E AI+LIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 434 IGEDQIFYCNQRGIDTEKAISLIVNGFGKEVLNKLPMEFAVEAQKLLEISLEGSVG 489
>gi|300774698|ref|ZP_07084561.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Chryseobacterium gleum ATCC 35910]
gi|300506513|gb|EFK37648.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Chryseobacterium gleum ATCC 35910]
Length = 482
Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats.
Identities = 329/489 (67%), Positives = 389/489 (79%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E +V ++ +Y++G+ET I + P GLNEDIIR ISAKK EP+WM EWRL
Sbjct: 1 MSKYTEDDLRV-DLENKKYEFGWETKIDYEDFPIGLNEDIIRAISAKKEEPEWMTEWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+++ W M +P+WA I+Y DF + YYAAPK SLD+VDPELL+T+EKLGI I
Sbjct: 60 SFKIWQKMVEPTWANIKYEKPDFQAIRYYAAPKVKPELASLDEVDPELLKTFEKLGINIE 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ L+G VAVD V DSVSV TTF++ L + G+IF ISEAI HPDLV+KYL V
Sbjct: 120 EQKRLSG-----VAVDIVMDSVSVKTTFQDTLAEKGIIFCSISEAIKNHPDLVRKYLGKV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP GDNFYAALNSAVF+DGSF YIPKGV+CPMELSTYFRIN+ GTGQFERTL+IADEGSY
Sbjct: 175 VPRGDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQAGTGQFERTLVIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALDNAEIKYSTVQNWYPG+ +GKGG++NFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIALDNAEIKYSTVQNWYPGNEEGKGGVFNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ + GEFYSIA++N Q D+GTKM+H+ K
Sbjct: 295 C-ERNAKISWTQVETGSAVTWKYPSCILKGDNAIGEFYSIAVTNNHQYADTGTKMIHIGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V V A +RNF+QCDSLL+GN CGAHT PYIE K+
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVKVMPSAKGARNFSQCDSLLMGNECGAHTFPYIEIKD 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S LEHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFA+EAQKL+
Sbjct: 414 PSAQLEHEATTSKIGEDQIFYCNQRGIDTERAIALIVNGFSKEVLNKLPMEFAIEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|89889827|ref|ZP_01201338.1| FeS assembly permease SufB [Flavobacteria bacterium BBFL7]
gi|89518100|gb|EAS20756.1| FeS assembly permease SufB [Flavobacteria bacterium BBFL7]
Length = 482
Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats.
Identities = 329/489 (67%), Positives = 396/489 (80%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E + +++ +Y+YGF T+I+ D P GL+ED+IR ISAKKNEP WML+WRL
Sbjct: 1 MSKYTEE-ELEKELQNKEYEYGFYTDIKSDTIPIGLSEDVIRIISAKKNEPQWMLDWRLQ 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR ++ M++P WA + Y D + YY+AP S SLD+VDPELL T++KLGI I
Sbjct: 60 AYRVFIEMEEPDWANVNYEKPDLQAISYYSAPNSKPKYDSLDEVDPELLETFKKLGISID 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAG VA+D V DSVSV TTFK+ L + G+IF PISEAI EHP+LVKKYL T+
Sbjct: 120 EQKKLAG-----VAMDIVVDSVSVATTFKKTLAEKGIIFCPISEAIQEHPELVKKYLGTI 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P DN+YAALNSAVF+DGSF YIPKGV+CPMELSTYFRINE GTGQFERTL+IADEGSY
Sbjct: 175 IPQSDNYYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINEGGTGQFERTLVIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAA VEL+ALD+AEIKYSTVQNWYPG+++GKGG++NFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAACVELIALDDAEIKYSTVQNWYPGNAEGKGGVFNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N FQQ D+GTKM+HL K
Sbjct: 295 C-ENNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSIAVTNNFQQADTGTKMVHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ A ++RNF+QCDSLL+GN CGAHT PYIE+ N
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVKINSRATNARNFSQCDSLLMGNECGAHTFPYIENSN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S+ +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 414 STSKVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|313206623|ref|YP_004045800.1| iron-regulated ABC transporter membrane component sufb [Riemerella
anatipestifer DSM 15868]
gi|312445939|gb|ADQ82294.1| Iron-regulated ABC transporter membrane component SufB [Riemerella
anatipestifer DSM 15868]
gi|325335936|gb|ADZ12210.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Riemerella anatipestifer RA-GD]
Length = 481
Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats.
Identities = 321/487 (65%), Positives = 383/487 (78%), Gaps = 7/487 (1%)
Query: 4 VRETVDKV-RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
++ T D + + +Y+ GF T+I+ + P GLNEDIIR ISAKKNEP+WM EWRL ++
Sbjct: 1 MKYTEDDLREDLKNKEYEAGFYTDIEYEDFPTGLNEDIIRQISAKKNEPEWMTEWRLESF 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R W M++P WA ++Y DF + YYAAPK SLD+VDPELL+T+EKLGI + EQ
Sbjct: 61 RIWQKMEEPDWANVKYEKPDFQAIKYYAAPKKKPELASLDEVDPELLKTFEKLGISLDEQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ L GV V V TTF+E LK+ G+IF ISEAI E+PDLVKKY+ VVP
Sbjct: 121 KRLTGVAVDVVMDSVS-----VKTTFQETLKEKGIIFCSISEAIQEYPDLVKKYIGKVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNFYAALNSAVF+DGSF YIPKGV+CPMELSTYFRIN+ GTGQFERTL++ADEGSYVS
Sbjct: 176 RGDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQAGTGQFERTLVVADEGSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+A++ AEIKYSTVQNWYPGD GKGG++NFVTKRG C
Sbjct: 236 YLEGCTAPSRDENQLHAAVVELIAMEGAEIKYSTVQNWYPGDESGKGGVFNFVTKRGLC- 294
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N Q D+GTKM+H+ KNT
Sbjct: 295 EKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNHQWADTGTKMIHIGKNT 354
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG SNN+YRG V V A +RNF+QCDSLL+GN CGAHT PYIE K+ S
Sbjct: 355 KSTIISKGISAGKSNNSYRGLVKVMPSAKGARNFSQCDSLLMGNECGAHTFPYIEIKDPS 414
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEATTSKI ++ +FYC QRG+ E AIALIVNGF +EVL KLPMEFA+EAQKL++I
Sbjct: 415 AQLEHEATTSKIGEDQIFYCNQRGLDTEKAIALIVNGFSKEVLNKLPMEFAIEAQKLLEI 474
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 475 SLEGSVG 481
>gi|163753696|ref|ZP_02160819.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
gi|161325910|gb|EDP97236.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
Length = 482
Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats.
Identities = 329/489 (67%), Positives = 394/489 (80%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E + ++++ +Y+YGF T+I+ D P GLNEDI+R IS KKNEP+WM EWR+
Sbjct: 1 MSKYTEEELQ-KELETKEYEYGFYTDIESDTFPSGLNEDIVRAISKKKNEPEWMTEWRID 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W M++P WA +RY DF + YY+APK ++LDDVDPELL Y+KLGI I
Sbjct: 60 AFRIWSEMEEPEWANVRYDKPDFQAISYYSAPKKADPNKTLDDVDPELLEMYKKLGISID 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ L G VA+D V DSVSV TTFK+ L + G+IF PISEAI ++P+LV+KYL T+
Sbjct: 120 EQKKLQG-----VAIDIVVDSVSVATTFKKTLAEKGIIFCPISEAIQDYPELVQKYLGTI 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVFTDGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL+IADEGSY
Sbjct: 175 VPKKDNFYAALNSAVFTDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNW+PG ++GKGG+YNFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWFPGTAEGKGGVYNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C SKISWTQ+ETGSA+TWKYPSC+L+G S GEFYSIA++N +QQ D+GTKM+HL K
Sbjct: 295 C-ETNSKISWTQVETGSAVTWKYPSCVLKGNNSVGEFYSIAVTNNYQQADTGTKMIHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V + A ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVQIAAKAENARNFSQCDSLLMGNKCGAHTFPYIEAKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI ++ +FYC QRGI E AIALIVNGF ++VL KLPMEFAVEAQKL+
Sbjct: 414 KTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKDVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|167627990|ref|YP_001678490.1| cysteine desulfurase activator complex subunit SufB [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|241668544|ref|ZP_04756122.1| cysteine desulfurase activator complex subunit SufB [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254877079|ref|ZP_05249789.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|167597991|gb|ABZ87989.1| SufS activator complex, SufB subunit [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|254843100|gb|EET21514.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 481
Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats.
Identities = 335/482 (69%), Positives = 403/482 (83%), Gaps = 4/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF T I+ + GLNED+IR ISA+K EP+++LEWRL AY++WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTEIEAETIDAGLNEDVIRLISARKKEPEFLLEWRLKAYKKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + YPAIDF + YY++PKS P+SLD+VDPE++ TY KLGIP+ EQE+LAG
Sbjct: 63 KSPEWADLSYPAIDFQAISYYSSPKSLKDHPKSLDEVDPEIIETYNKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--KNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLI+ADEGSYVSYLEGC
Sbjct: 181 YAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIVADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD +GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGVCH-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + A+++RNF+QCDSLLIG+NCGAHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNASNARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEAQKL+++SLEG+
Sbjct: 420 EATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGA 479
Query: 488 VG 489
VG
Sbjct: 480 VG 481
>gi|315022117|gb|EFT35146.1| cysteine desulfurase activator complex subunit SufB [Riemerella
anatipestifer RA-YM]
Length = 481
Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats.
Identities = 321/487 (65%), Positives = 383/487 (78%), Gaps = 7/487 (1%)
Query: 4 VRETVDKV-RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
++ T D + + +Y+ GF T+I+ + P GLNEDIIR ISAKKNEP+WM EWRL ++
Sbjct: 1 MKYTEDDLREDLKNKEYEAGFYTDIEYEDFPTGLNEDIIRQISAKKNEPEWMTEWRLESF 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R W M++P WA ++Y DF + YYAAPK SLD+VDPELL+T+EKLGI + EQ
Sbjct: 61 RIWQKMEEPDWANVKYEKPDFQAIKYYAAPKKKPELASLDEVDPELLKTFEKLGISLDEQ 120
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ L GV V V TTF+E LK+ G+IF ISEAI E+PDLVKKY+ VVP
Sbjct: 121 KRLTGVAVDVVMDSVS-----VKTTFQETLKEKGIIFCSISEAIQEYPDLVKKYIGKVVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNFYAALNSAVF+DGSF YIPKGV+CPMELSTYFRIN+ GTGQFERTL++ADEGSYVS
Sbjct: 176 RGDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQAGTGQFERTLVVADEGSYVS 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP RDENQLHAAVVEL+A++ AEIKYSTVQNWYPGD GKGG++NFVTKRG C
Sbjct: 236 YLEGCTAPSRDENQLHAAVVELIAMEGAEIKYSTVQNWYPGDESGKGGVFNFVTKRGLC- 294
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N Q D+GTKM+H+ KNT
Sbjct: 295 EKDAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNHQWADTGTKMIHIGKNT 354
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG SNN+YRG V V A +RNF+QCDSLL+GN CGAHT PYIE K+ S
Sbjct: 355 KSTIISKGISAGKSNNSYRGLVKVMPSAKGARNFSQCDSLLMGNECGAHTFPYIEIKDPS 414
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEATTSKI ++ +FYC QRG+ E AIALIVNGF +EVL KLPMEFA+EAQKL++I
Sbjct: 415 AQLEHEATTSKIGEDQIFYCNQRGLDTEKAIALIVNGFSKEVLNKLPMEFAIEAQKLLEI 474
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 475 SLEGSVG 481
>gi|332878133|ref|ZP_08445862.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683871|gb|EGJ56739.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 489
Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats.
Identities = 318/476 (66%), Positives = 384/476 (80%), Gaps = 3/476 (0%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP-SWA 74
+YKYGF T+I+ D PKGLNE+++ +S KKNEP+WM EWRL A+R W M +P WA
Sbjct: 15 NSEYKYGFYTDIESDTFPKGLNEEVVIALSKKKNEPEWMTEWRLEAFRAWQAMAEPPHWA 74
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK-V 133
+++ +F D+ YY+APK SLD+VDP+LL T+EKLGI + EQ+ LAGV+ V
Sbjct: 75 NVQFETPNFQDIAYYSAPKQKPKLNSLDEVDPQLLETFEKLGISLEEQKRLAGVEDKPAV 134
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D V DSVSV TTF++ L + G+IF +SEAI +HPDLV+KYL TVVP DNFYAALNS
Sbjct: 135 AMDVVMDSVSVATTFQKTLAERGIIFCSMSEAIQKHPDLVRKYLGTVVPKTDNFYAALNS 194
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSF Y+PKGVRCPMELSTYFRIN+ GTGQFERTL+I DEG+YVSYLEGCTAP+RD
Sbjct: 195 AVFSDGSFCYVPKGVRCPMELSTYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPRRD 254
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
ENQLHAAVVEL+A++ EIKYSTVQNW+PGD GKGG+YNFVTKR +KISWTQ+
Sbjct: 255 ENQLHAAVVELIAMEGGEIKYSTVQNWFPGDKDGKGGVYNFVTKRALA-EKNAKISWTQV 313
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
ETGSAITWKYPS +L+G+ S GEFYSIA++N FQQ D+GTKM+HL NT S I+SKGISA
Sbjct: 314 ETGSAITWKYPSVVLKGDNSIGEFYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISA 373
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G S N+YRG V V A ++RNF+QCDSLL+GNNCGAHT PYIE+KN + +EHEATTSK
Sbjct: 374 GKSQNSYRGLVKVVPKAKNARNFSQCDSLLMGNNCGAHTFPYIEAKNPTAQIEHEATTSK 433
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
I ++ +FYC QRGI E AI+LIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 434 IGEDQIFYCNQRGIDTEKAISLIVNGFGKEVLNKLPMEFAVEAQKLLEISLEGSVG 489
>gi|288800578|ref|ZP_06406036.1| FeS assembly protein SufB [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332791|gb|EFC71271.1| FeS assembly protein SufB [Prevotella sp. oral taxon 299 str.
F0039]
Length = 484
Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats.
Identities = 307/486 (63%), Positives = 383/486 (78%), Gaps = 6/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++ + VR + +Y++GF T++ D PKGLNE+++R IS KKNEP+W+LE+RL A+
Sbjct: 5 EQQKNEYVRSVAERKYEFGFTTDVHTDIIPKGLNEEVVRLISHKKNEPEWLLEFRLKAFE 64
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W TMK P+WA I P ID+ + YYA P P +DPEL +T++KLGIP+ E+
Sbjct: 65 HWKTMKQPTWAHIDLPEIDYQAISYYADP-MAKKPAGDGKIDPELEKTFDKLGIPLEERL 123
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
IL+G VAVDA+ DSVSV TTFKE+L + GVIF I EA+ EHP+L+K+YL TVVP
Sbjct: 124 ILSG-----VAVDAIMDSVSVKTTFKEKLAEKGVIFSSIGEAVQEHPELIKEYLGTVVPY 178
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ SYVSY
Sbjct: 179 RDNFFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDSYVSY 238
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG++N VTKRGD RG
Sbjct: 239 LEGCTAPMRDENQLHAAIVEIIIKDNAEVKYSTVQNWYPGDENGKGGVFNLVTKRGDLRG 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +QQ D+GTKM+H+ KNT
Sbjct: 299 VNSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNYQQADTGTKMIHMGKNTK 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++ N S
Sbjct: 359 STIISKGISAGHSQNSYRGLVRATPNADNARNYSSCDSLLLGDKCGAHTFPYMDIHNDSA 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ L YC QRGIP E AI LIVNG+ +EVL KLPMEFAVEAQKL+ +S
Sbjct: 419 VIEHEATTSKIGEDQLLYCNQRGIPTEQAIGLIVNGYAKEVLNKLPMEFAVEAQKLLSVS 478
Query: 484 LEGSVG 489
LEG+VG
Sbjct: 479 LEGTVG 484
>gi|123967622|ref|YP_001008480.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. AS9601]
gi|123197732|gb|ABM69373.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
Length = 480
Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats.
Identities = 297/479 (62%), Positives = 372/479 (77%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + + YKYGF T+I+ +K KGLNEDII+ IS KK EP ++L++RL A++RW MK+
Sbjct: 7 VKDVVKEPYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPKFLLDFRLKAFKRWQKMKE 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA + Y ID+ D+ YY+APK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 67 PDWAALGYKKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKL----- 121
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+ VAVDAVFDSVS+ TTF+EEL + GVIF ISEA+ H DL++KYL TVVP DN++AA
Sbjct: 122 TNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFAA 181
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV CPM+LS+YFRIN +GQFERTLIIA+E S VSYLEGCTAP
Sbjct: 182 LNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAP 241
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D N LHAAVVEL+ALD+A IKYSTVQNWY GD +G GGI+NFVTKRG C G RSKISW
Sbjct: 242 MFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISW 301
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+Q+ETGSAITWKYPSCLL GE+S GEFYS+A++N QQ D+GTKM+H+ T S IVSKG
Sbjct: 302 SQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKG 361
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A SRN++QCDS+LIG+ A+T PYI+S+ + +EHEA+
Sbjct: 362 ISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEAS 421
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 422 TCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG 480
>gi|326334703|ref|ZP_08200910.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693153|gb|EGD35085.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 489
Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats.
Identities = 313/476 (65%), Positives = 379/476 (79%), Gaps = 3/476 (0%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP-SWA 74
+YKYGF T+I+ D PKGLNE+++ +S KKNEP WM +WR+ A+R W M +P WA
Sbjct: 15 NSEYKYGFYTDIESDTFPKGLNEEVVVALSKKKNEPQWMTDWRVEAFRIWKAMPEPPHWA 74
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS-KV 133
+++ DF D+ YY+APK SL++VDP+LL T+ KLGI + EQ+ L+GV+ V
Sbjct: 75 NLKFETPDFQDIAYYSAPKQKPKLNSLNEVDPKLLETFNKLGISLEEQKRLSGVEEKPTV 134
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D V DSVSV TTF+ L + GVIF ISEAI +HPDLV+KYL TVVP DNFYAALNS
Sbjct: 135 AMDVVMDSVSVATTFQRTLAEKGVIFCSISEAIQKHPDLVRKYLGTVVPKTDNFYAALNS 194
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVFTDGSF Y+PKGVRCPMELSTYFRIN+ GTGQFERTL+I DEG+YVSYLEGCTAP+RD
Sbjct: 195 AVFTDGSFCYVPKGVRCPMELSTYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKRD 254
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
ENQLHAAVVEL+A++ EIKYSTVQNW+PGD G GG+YNFVTKR +KISWTQ+
Sbjct: 255 ENQLHAAVVELIAMEGGEIKYSTVQNWFPGDKDGSGGVYNFVTKRALA-EKNAKISWTQV 313
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
ETGSAITWKYPS +L+G+ + GEFYSIA++N FQQ D+GTKM+H+ NT S I+SKGISA
Sbjct: 314 ETGSAITWKYPSVVLKGDNAIGEFYSIAVTNHFQQADTGTKMIHIGNNTKSTIISKGISA 373
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G S N+YRG V V A ++RNF+QCDSLL+GN CGAHT PYIE+KN + +EHEATTSK
Sbjct: 374 GKSQNSYRGLVKVVPSAKNARNFSQCDSLLMGNKCGAHTFPYIEAKNPTAQIEHEATTSK 433
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
I ++ +FYC QRGI E AI+LIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 434 IGEDQIFYCNQRGIDTEKAISLIVNGFGKEVLNKLPMEFAVEAQKLLEISLEGSVG 489
>gi|315224611|ref|ZP_07866436.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga ochracea F0287]
gi|314945396|gb|EFS97420.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga ochracea F0287]
Length = 490
Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats.
Identities = 316/477 (66%), Positives = 383/477 (80%), Gaps = 4/477 (0%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP-SWA 74
+YKYGF T+I+ + PKGLNE+++ +S KKNEP WM +WRL A+R W M++P WA
Sbjct: 15 NSEYKYGFYTDIESETFPKGLNEEVVIALSKKKNEPQWMTDWRLEAFRAWQAMEEPPHWA 74
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK-- 132
+++ DF D+ YY+APK SLD+VDP+LL T++KLGI + EQ+ L GV+ K
Sbjct: 75 NLKFETPDFQDIAYYSAPKQKPKLNSLDEVDPQLLETFQKLGISLEEQKRLVGVEDEKPA 134
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
VA+D V DSVSV TTF++ L + G+IF ISEAI +HPDLV+KYL TVVP DNFYAALN
Sbjct: 135 VAMDVVMDSVSVATTFQKTLAERGIIFCSISEAIQKHPDLVRKYLGTVVPKTDNFYAALN 194
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
SAVF+DGSF Y+PKGVRCPMELSTYFRIN+ GTGQFERTL+I DEG+YVSYLEGCTAP+R
Sbjct: 195 SAVFSDGSFCYVPKGVRCPMELSTYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKR 254
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
DENQLHAAVVEL+A++ EIKYSTVQNW+PGD GKGG+YNFVTKR +KISWTQ
Sbjct: 255 DENQLHAAVVELIAMEGGEIKYSTVQNWFPGDKDGKGGVYNFVTKRALA-EKNAKISWTQ 313
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+ETGSAITWKYPS +L+G+ S GEFYSIA++N FQQ D+GTKM+HL NT S I+SKGIS
Sbjct: 314 VETGSAITWKYPSVVLKGDNSIGEFYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGIS 373
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
AG S N+YRG V V A ++RNF+QCDSLL+GN CGAHT PYIE+KN + +EHEATTS
Sbjct: 374 AGKSQNSYRGLVKVVPNAKNARNFSQCDSLLMGNLCGAHTFPYIEAKNPTAQIEHEATTS 433
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
KI ++ +FYC QRGI E AI+LIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 434 KIGEDQIFYCNQRGIDTEKAISLIVNGFGKEVLNKLPMEFAVEAQKLLEISLEGSVG 490
>gi|157412424|ref|YP_001483290.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9215]
gi|254526853|ref|ZP_05138905.1| FeS assembly protein SufB [Prochlorococcus marinus str. MIT 9202]
gi|157386999|gb|ABV49704.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9215]
gi|221538277|gb|EEE40730.1| FeS assembly protein SufB [Prochlorococcus marinus str. MIT 9202]
Length = 480
Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats.
Identities = 295/479 (61%), Positives = 371/479 (77%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + + YKYGF T+I+ +K KGLNEDIIR IS KK EP ++L++RL A+++W M +
Sbjct: 7 VKDVVKEPYKYGFVTDIETEKIAKGLNEDIIRLISQKKEEPKYLLDFRLKAFKKWQKMDE 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA + Y ID+ D+ YY+APK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 67 PDWAGLGYKQIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKL----- 121
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+ VAVDAVFDSVS+ TTF+EEL + GVIF ISEA+ H DL+++YL TVVP DN++AA
Sbjct: 122 TNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHSDLIEQYLGTVVPASDNYFAA 181
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV CPM+LS+YFRIN +GQFERTLIIA+E S VSYLEGCTAP
Sbjct: 182 LNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAP 241
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D N LHAAVVEL+ALD+A IKYSTVQNWY GD +G GGI+NFVTKRG C G RSKISW
Sbjct: 242 MFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISW 301
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+Q+ETGSAITWKYPSCLL GE+S GEFYS+A++N QQ D+GTKM+H+ T S IVSKG
Sbjct: 302 SQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKG 361
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A SRN++QCDS+LIG+ A+T PYI+S+ + +EHEA+
Sbjct: 362 ISAGNSINSYRGLVKMGTKATGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEAS 421
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 422 TCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG 480
>gi|194477107|ref|YP_002049286.1| FeS assembly protein SufB [Paulinella chromatophora]
gi|171192114|gb|ACB43076.1| FeS assembly protein SufB [Paulinella chromatophora]
Length = 480
Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats.
Identities = 305/484 (63%), Positives = 378/484 (78%), Gaps = 5/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T V + Y+YGF T+I+ +K KGL+ED++R IS+KK EPD++L++RL AYR W
Sbjct: 2 STSTNVADLVSQPYRYGFVTDIETEKIAKGLSEDVVRLISSKKEEPDFLLQFRLRAYRNW 61
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L MK+P WA + YP ID+ +L YYAAPK+ SLD++DP+LL T+ KLGIP+ EQ+ L
Sbjct: 62 LQMKEPHWATLGYPPIDYQELIYYAAPKNQGKKASLDEIDPKLLETFNKLGIPLSEQKRL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ VAVDAVFDSVS+ TT+KE+L K GVIF ISEA+ EHP+LV++YL T+VP D
Sbjct: 122 S-----NVAVDAVFDSVSIATTYKEKLSKHGVIFYSISEAVKEHPELVERYLGTIVPSND 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLIIA+EGS VSYLE
Sbjct: 177 NYFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIIAEEGSSVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP D NQLHAAVVELVALD+A IKYSTVQNWY GD GKGGIYNFVTKRG CRG R
Sbjct: 237 GCTAPMFDTNQLHAAVVELVALDDATIKYSTVQNWYAGDENGKGGIYNFVTKRGHCRGER 296
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
S+ISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N QQ D+GTKM+H+ T S
Sbjct: 297 SRISWTQVETGSAITWKYPSCVLQGKDSVGEFYSVALTNNRQQADTGTKMIHIGCGTRSV 356
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSKGISAG S+N+YRG V V A ++N++QCDSLLIG+ A+T PYI S+ ++
Sbjct: 357 IVSKGISAGQSSNSYRGLVQVLPKAIGAKNYSQCDSLLIGDQAAANTYPYIRSQQPQASI 416
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+T +IS + LFY RG+ E A++++VNGF R+V +LPMEFA EA KL+ + LE
Sbjct: 417 EHEASTCRISADQLFYLQSRGVGFEEAVSMMVNGFCRDVFNQLPMEFAAEADKLLALKLE 476
Query: 486 GSVG 489
GSVG
Sbjct: 477 GSVG 480
>gi|126695422|ref|YP_001090308.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9301]
gi|126542465|gb|ABO16707.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
Length = 500
Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats.
Identities = 297/479 (62%), Positives = 372/479 (77%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + + YKYGF T+I+ +K KGLNEDII+ IS KK EP ++L++RL A+++W MK+
Sbjct: 27 VKDVVNETYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPRFLLDFRLKAFKKWQKMKE 86
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA + Y ID+ D+ YY+APK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 87 PDWAALGYEKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKL----- 141
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+ VAVDAVFDSVS+ TTF+EEL + GVIF ISEA+ H DL++KYL TVVP DN++AA
Sbjct: 142 TNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFAA 201
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV CPM+LS+YFRIN +GQFERTLIIA+E S VSYLEGCTAP
Sbjct: 202 LNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAP 261
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D N LHAAVVEL+ALD+A IKYSTVQNWY GD +G GGI+NFVTKRG C G RSKISW
Sbjct: 262 MFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISW 321
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+Q+ETGSAITWKYPSCLL GE+S GEFYS+A++N QQ D+GTKM+H+ T S IVSKG
Sbjct: 322 SQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKG 381
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A SRN++QCDS+LIG+ A+T PYI+S+ + +EHEA+
Sbjct: 382 ISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEAS 441
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T +IS+E LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 442 TCRISEEQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG 500
>gi|225010412|ref|ZP_03700884.1| FeS assembly protein SufB [Flavobacteria bacterium MS024-3C]
gi|225005891|gb|EEG43841.1| FeS assembly protein SufB [Flavobacteria bacterium MS024-3C]
Length = 481
Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats.
Identities = 326/471 (69%), Positives = 385/471 (81%), Gaps = 6/471 (1%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
Y+YGF T+I+ D P GL+E+I+ IS KK EP+WM +WRL AYR WL M++P WA + Y
Sbjct: 17 YEYGFYTDIESDTFPIGLSEEIVVAISKKKEEPEWMTQWRLDAYRSWLEMEEPEWANVHY 76
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
DF + YY+AP S+D+VDPELL T+++LGI + EQ++LAG VAVD V
Sbjct: 77 TKPDFQAISYYSAPNKKPKYDSIDEVDPELLDTFKRLGISLDEQKMLAG-----VAVDIV 131
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
DSVSV TTFK+ L + G+IF ISEAI EHP+LVKKY+ +VVP DN+YAALNSAVF+D
Sbjct: 132 MDSVSVATTFKKTLGEKGIIFCSISEAIREHPELVKKYIGSVVPQKDNYYAALNSAVFSD 191
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL+IADEGSYVSYLEGCTAP RDENQLH
Sbjct: 192 GSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVIADEGSYVSYLEGCTAPSRDENQLH 251
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVELVALD+AEIKYSTVQNW+PGD QGKGG+YNFVTKRG C +KISWTQ+ETGSA
Sbjct: 252 AAVVELVALDHAEIKYSTVQNWFPGDKQGKGGVYNFVTKRGIC-ENHAKISWTQVETGSA 310
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+TWKYPSC+L+G+ S GEFYSIA++N FQQ D+GTKM+HL KNT S I+SKGISAG S N
Sbjct: 311 VTWKYPSCVLKGDHSIGEFYSIAVTNNFQQADTGTKMIHLGKNTRSTIISKGISAGKSQN 370
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+YRG V V A ++RNF+QCDSLL+G+ CGAHT PYIE KN + +EHEATTSKI ++
Sbjct: 371 SYRGLVQVGARAENARNFSQCDSLLMGDQCGAHTFPYIEVKNKTAQIEHEATTSKIGEDQ 430
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+FYC QRGIP E AIALIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 431 IFYCNQRGIPTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLLEISLEGSVG 481
>gi|317504202|ref|ZP_07962196.1| FeS assembly protein SufB [Prevotella salivae DSM 15606]
gi|315664691|gb|EFV04364.1| FeS assembly protein SufB [Prevotella salivae DSM 15606]
Length = 507
Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats.
Identities = 299/488 (61%), Positives = 383/488 (78%), Gaps = 7/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+A +E V+++ +Y++GF T++Q D KGLNED++R IS KK EP+W+L++RL A
Sbjct: 27 MAEKEKNKFVKQVAEKKYEFGFTTDVQTDIIEKGLNEDVVRLISKKKGEPEWLLDFRLKA 86
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y W +K P+W + P ID+ + YYA P + ++DPEL +T++KLGIP+ E
Sbjct: 87 YEYWKDLKQPTWGHVHLPEIDYQAISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLEE 144
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L+G AVDA+ DSVSV TTFKE+L++ G+IF I EA+ EH DLVK+YL +VV
Sbjct: 145 RLALSGT-----AVDAIMDSVSVKTTFKEKLREKGIIFCSIGEAVKEHADLVKEYLGSVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN++AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +YV
Sbjct: 200 PYRDNYFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDNAYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG+ N VTKRGD
Sbjct: 260 SYLEGCTAPMRDENQLHAAIVEIIVKDNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRGDL 319
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ + EFYS+A++N FQ+ D+GTKM+H+ KN
Sbjct: 320 RGVNSKLSWTQVETGSAITWKYPSCILRGDNAVAEFYSVAVTNNFQEADTGTKMIHMGKN 379
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+NCGAHT PY++ N
Sbjct: 380 TKSTIISKGISAGHSQNSYRGLVRATANADNARNYSSCDSLLLGSNCGAHTFPYMDIHND 439
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS+E LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 440 TAVIEHEATTSKISEEQLFYCNQRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEAQKLLS 499
Query: 482 ISLEGSVG 489
+SLEG+VG
Sbjct: 500 VSLEGTVG 507
>gi|332992278|gb|AEF02333.1| cysteine desulfurase activator complex subunit SufB [Alteromonas
sp. SN2]
Length = 478
Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats.
Identities = 330/482 (68%), Positives = 396/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y GF + I+ + GL+E +IR ISA KNEP+WMLEWRL AY WL M
Sbjct: 3 EQIEQALERKYDAGFYSEIESETFESGLDESVIRRISAMKNEPEWMLEWRLKAYHSWLVM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP +D+ + YY+APKS PQSLD+VDPELLRTYEKLGIP+ EQE+LAG
Sbjct: 63 EEPDWAHVDYPKVDYQAISYYSAPKSMKDKPQSLDEVDPELLRTYEKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSVVTTF+ +L+++GVIF PISEA+ ++PDLVKKY+ +VVP DN+
Sbjct: 123 -----VAVDAVFDSVSVVTTFRSKLEEAGVIFCPISEALVKYPDLVKKYIGSVVPRTDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFVYIPKG RCPMELSTYFRINE TGQFERTLI+A+EGSYVSYLEGC
Sbjct: 178 FAALNSAVFTDGSFVYIPKGTRCPMELSTYFRINEMNTGQFERTLIVAEEGSYVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVA+D+A IKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVAMDDATIKYSTVQNWYPGDENGKGGIYNFVTKRGICH-KNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++ G QQ D+GTKM+HL KNT S I+
Sbjct: 297 ISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSVALTRGRQQADTGTKMIHLGKNTRSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNN YRG V + A +RNFT+CDSLLIG+ CGAHT PYIES+N S +EH
Sbjct: 357 SKGISAGNSNNAYRGLVQMGPRADGARNFTECDSLLIGDKCGAHTFPYIESRNPSAIVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SDE LF C QRG+ E ++++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDEQLFLCQQRGLDTEKSVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|297620329|ref|YP_003708466.1| FeS assembly protein SufB [Waddlia chondrophila WSU 86-1044]
gi|297375630|gb|ADI37460.1| FeS assembly protein SufB [Waddlia chondrophila WSU 86-1044]
Length = 483
Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats.
Identities = 304/476 (63%), Positives = 389/476 (81%), Gaps = 6/476 (1%)
Query: 15 DVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ ++YKYGF TN++ ++ P GLNE+IIR IS K+ EP+++L +R+ A+++WLTM +P+W
Sbjct: 13 ENNEYKYGFVTNVETERLPPGLNEEIIREISRKRGEPEFLLNFRVKAFQKWLTMAEPTWP 72
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+ YP ID+ + YY+APK+ SLD+VDPE+LRT+EKLGIP+ EQ+ LA VA
Sbjct: 73 NVAYPPIDYQAISYYSAPKTKSSLSSLDEVDPEILRTFEKLGIPLDEQKRLA-----NVA 127
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
VD VFDSVS+ TTFK++L+++GV+ ISEAI E+P+LV+KYL +VVPVGDNF+AALNSA
Sbjct: 128 VDMVFDSVSIGTTFKKKLEEAGVVLCSISEAIHEYPELVEKYLGSVVPVGDNFFAALNSA 187
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
VF+DGSFVY+PKGV+CPMELSTYFRIN+K +GQFERTLIIA+E S VSYLEGCTAP D
Sbjct: 188 VFSDGSFVYVPKGVKCPMELSTYFRINDKESGQFERTLIIAEERSSVSYLEGCTAPAYDT 247
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
NQLHAAVVELVALD+AEIKYSTVQNWY GD G GG+YNFVTKRG C G RSKISWTQ+
Sbjct: 248 NQLHAAVVELVALDDAEIKYSTVQNWYAGDPKTGSGGVYNFVTKRGRCAGKRSKISWTQV 307
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
E G+AITWKYPSCLL+G+ S GEFYS+A++NG Q D+GTKM+H+ KNT S I+SKGISA
Sbjct: 308 EVGAAITWKYPSCLLQGDDSVGEFYSVALTNGKMQADTGTKMIHMGKNTRSTIISKGISA 367
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S+NTYRG V + AA +RN+TQCDS+L+G+ C A+T PYI+ NSS +EHEA+TSK
Sbjct: 368 DQSHNTYRGLVKMTPKAAGARNYTQCDSMLVGDQCSANTFPYIDVGNSSSEVEHEASTSK 427
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+++E +FY L RGI +E AI +IVNGF +EV+Q+LP+EFA EA++L+ + LE SVG
Sbjct: 428 MNEEQIFYFLSRGISQEDAINMIVNGFCKEVIQELPLEFATEAKQLLALKLENSVG 483
>gi|192359328|ref|YP_001981954.1| cysteine desulfurase activator complex subunit SufB [Cellvibrio
japonicus Ueda107]
gi|190685493|gb|ACE83171.1| FeS assembly protein SufB [Cellvibrio japonicus Ueda107]
Length = 478
Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats.
Identities = 330/482 (68%), Positives = 400/482 (82%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++V ++ +Y GF T I + GLNE++IRFISAKKNEP W+L+WRL A+ W M
Sbjct: 3 EEVERLIKKEYAAGFTTQIDSETLSPGLNEEVIRFISAKKNEPQWLLDWRLKAFNAWREM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA ++Y IDF L YY+APKS+ P+SLD+VDP+LL TYEKLGIP+ EQ LAG
Sbjct: 63 EEPEWAHVKYDDIDFQALSYYSAPKSMANRPKSLDEVDPKLLETYEKLGIPLHEQAALAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VA+D VFDSVSVVTTF+E+L ++GVIF ISEA+ ++P+LVK+YL +VVP DN+
Sbjct: 123 -----VAMDVVFDSVSVVTTFREKLAEAGVIFCSISEAVEKYPELVKQYLGSVVPQKDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAVF+DGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLI+ADEGSYVSYLEGC
Sbjct: 178 YAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIVADEGSYVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD QGKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDEQGKGGIYNFVTKRGVCF-THAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGS++TWKYPSC+LRG+ S GEFYS+A++N +QQ D+GTKM+H+ KNT S I+
Sbjct: 297 ISWTQVETGSSVTWKYPSCILRGDNSVGEFYSVALTNNYQQADTGTKMIHIGKNTRSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S+N YRG V ++ GA +RN+TQCDSLLIG+ CGAHT PYIESKN + +EH
Sbjct: 357 SKGISAGRSSNAYRGLVRMNPGAEGARNYTQCDSLLIGDKCGAHTFPYIESKNPTAVIEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+S++ LF C QRG+ E A+++IVNGF REV ++LPMEFAVEA KL+++SLEGS
Sbjct: 417 EATTSKVSEDQLFLCQQRGLDAEKAVSMIVNGFCREVFKELPMEFAVEAGKLLEVSLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|160872331|ref|ZP_02062463.1| FeS assembly protein SufB [Rickettsiella grylli]
gi|159121130|gb|EDP46468.1| FeS assembly protein SufB [Rickettsiella grylli]
Length = 480
Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats.
Identities = 321/484 (66%), Positives = 388/484 (80%), Gaps = 6/484 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T + + Y +GF ++I D GLNED+IR ISAKKNEP+++L WRL AYR WL
Sbjct: 2 TQATLETLLQQDYPHGFVSDIPADTLACGLNEDVIRHISAKKNEPEFLLAWRLKAYRHWL 61
Query: 67 TMKDPSWA-RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
++ +P WA + YPAID+ + YY+APK +SLD+VDPELLR Y KLGI ++EQE L
Sbjct: 62 SLTEPHWADYMDYPAIDYQAISYYSAPKLKKQLKSLDEVDPELLRIYTKLGISLKEQERL 121
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG VAVDAVFDS+SV TTFKE+LK G++F SEA+ E+P+L+K+YL TVVP D
Sbjct: 122 AG-----VAVDAVFDSISVATTFKEKLKAMGILFCSFSEAVQEYPELIKRYLGTVVPYAD 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
NFYA LN+AVFTDGSF YIPKG+RCPMELSTYFR+N TGQFERTLIIADEGSYVSYLE
Sbjct: 177 NFYACLNAAVFTDGSFCYIPKGIRCPMELSTYFRMNAANTGQFERTLIIADEGSYVSYLE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAPQRDENQLHAAVVEL+ALD+AEIKYSTVQNWYPGD +GKGGIYNFVTKRG CRG +
Sbjct: 237 GCTAPQRDENQLHAAVVELIALDHAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGHCRGKQ 296
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
SKISWTQ+ETGSAITWKYPS +L+G+ S GEFYS+A+++ QQ D+GTKM+H+ K+T S
Sbjct: 297 SKISWTQVETGSAITWKYPSVILQGDASVGEFYSVALTHHKQQADTGTKMIHIGKHTKST 356
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I+SKGISAG N+YRG V + A H+RN+TQCDSLLIG +C AHT P IE KN + +
Sbjct: 357 ILSKGISAGHGQNSYRGLVKIAETADHARNYTQCDSLLIGQHCKAHTFPSIEVKNQTAQI 416
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+ SKIS++ LFYCLQRGI E A++LIVNGF + V ++LPMEFAVEAQKL+ +SLE
Sbjct: 417 EHEASASKISEDQLFYCLQRGITREDALSLIVNGFCKAVFKELPMEFAVEAQKLLSLSLE 476
Query: 486 GSVG 489
GS+G
Sbjct: 477 GSIG 480
>gi|261881037|ref|ZP_06007464.1| FeS assembly protein SufB [Prevotella bergensis DSM 17361]
gi|270332219|gb|EFA43005.1| FeS assembly protein SufB [Prevotella bergensis DSM 17361]
Length = 485
Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats.
Identities = 302/486 (62%), Positives = 386/486 (79%), Gaps = 7/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+E V+++ +Y++GF T+I+ + P GL+ED++R IS KK EPDW+L++RL A+R
Sbjct: 7 EQEKNKFVKQVAEQKYEFGFTTDIETEIIPVGLDEDVVRLISRKKQEPDWLLDFRLEAFR 66
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W T++ P+W + P IDF + YYA P + ++DPEL +T++KLGIP+ E+
Sbjct: 67 YWKTLEVPTWGHLHLPEIDFQGISYYADPLAKKPAN--KEIDPELEKTFDKLGIPLEERL 124
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G AVDAV DSVSV TTFK++L + GVIF ISEA+ E+PDLV++YL +VVP+
Sbjct: 125 ALSGT-----AVDAVMDSVSVKTTFKKQLAEKGVIFCSISEAVREYPDLVRQYLGSVVPI 179
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF +ALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+AD+ SYVSY
Sbjct: 180 RDNFTSALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVADDDSYVSY 239
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAA+VE+V ++NAE+KYSTVQNWYPGD GKGG+ N VTKRGDCRG
Sbjct: 240 LEGCTAPMRDENQLHAAIVEIVVMNNAEVKYSTVQNWYPGDKDGKGGVLNLVTKRGDCRG 299
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S GEFYS+A++N Q+ D+GTKM+H+ KNT
Sbjct: 300 VNSKLSWTQVETGSAITWKYPSCILRGDNSQGEFYSVAVTNNHQEADTGTKMIHMGKNTK 359
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG S N+YRG V V A ++RN++ CDSLL+G++CGAHT PY++ N +
Sbjct: 360 STIISKGISAGNSQNSYRGLVRVTANAENARNYSSCDSLLLGSHCGAHTFPYLDIHNETA 419
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ LFYC QRGI E A+ LIVNG+ +EVL KLPMEFAVEAQKL+ +S
Sbjct: 420 IVEHEATTSKISEDQLFYCNQRGIGMEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLSVS 479
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 480 LEGSVG 485
>gi|256819177|ref|YP_003140456.1| cysteine desulfurase activator complex subunit SufB [Capnocytophaga
ochracea DSM 7271]
gi|256580760|gb|ACU91895.1| FeS assembly protein SufB [Capnocytophaga ochracea DSM 7271]
Length = 490
Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats.
Identities = 315/477 (66%), Positives = 382/477 (80%), Gaps = 4/477 (0%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP-SWA 74
+YKYGF T+I+ + PKGLNE+++ +S KKNEP WM +WRL A+R W M++P WA
Sbjct: 15 NSEYKYGFYTDIESETFPKGLNEEVVIALSKKKNEPQWMTDWRLEAFRAWQAMEEPPHWA 74
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK-- 132
+++ DF D+ YY+APK SLD+VDP+LL T++KLGI + EQ+ LAGV+ K
Sbjct: 75 NLKFETPDFQDIAYYSAPKQKPKLNSLDEVDPQLLETFQKLGISLEEQKRLAGVEDEKPA 134
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
VA+D V DSVSV TTF++ L + G+IF ISEAI +HPDLV+KYL VVP DNFYAALN
Sbjct: 135 VAMDVVMDSVSVATTFQKTLAERGIIFCSISEAIQKHPDLVRKYLGIVVPKTDNFYAALN 194
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
SAVF+DGSF Y+PKGVRCPMELSTYFRIN+ GTGQFERTL+I DEG+YVSYLEGCTAP+R
Sbjct: 195 SAVFSDGSFCYVPKGVRCPMELSTYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPKR 254
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
DENQLHA VVEL+A++ EIKYSTVQNW+PGD GKGG+YNFVTKR +KISWTQ
Sbjct: 255 DENQLHATVVELIAMEGGEIKYSTVQNWFPGDKDGKGGVYNFVTKRALA-EKNAKISWTQ 313
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+ETGSAITWKYPS +L+G+ S GEFYSIA++N FQQ D+GTKM+HL NT S I+SKGIS
Sbjct: 314 VETGSAITWKYPSVVLKGDNSIGEFYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGIS 373
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
AG S N+YRG V V A ++RNF+QCDSLL+GN CGAHT PYIE+KN + +EHEATTS
Sbjct: 374 AGKSQNSYRGLVKVVPNAKNARNFSQCDSLLMGNLCGAHTFPYIEAKNPTAQIEHEATTS 433
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
KI ++ +FYC QRGI E AI+LIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 434 KIGEDQIFYCNQRGIDTEKAISLIVNGFGKEVLNKLPMEFAVEAQKLLEISLEGSVG 490
>gi|86132485|ref|ZP_01051079.1| FeS assembly protein SufB [Dokdonia donghaensis MED134]
gi|85817046|gb|EAQ38230.1| FeS assembly protein SufB [Dokdonia donghaensis MED134]
Length = 481
Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats.
Identities = 326/489 (66%), Positives = 396/489 (80%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + D ++ +Y+YGF T+I+ + P GLNEDIIR IS KK EP WM +WRL
Sbjct: 1 MAYTED--DLREELKTKEYEYGFFTDIETETFPVGLNEDIIRAISKKKEEPQWMTDWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+ W +M++P WA + Y DF + YY+APKS+ ++LDDVDP+LL Y+KLGI I
Sbjct: 59 AYKVWQSMEEPDWANVNYEKPDFQSIAYYSAPKSVDPNKTLDDVDPDLLAMYKKLGISID 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ + + VA+D V DSVSV TTFK+ L + G+IFM ISEAI EHP+LV+K+L T+
Sbjct: 119 EQKRM-----NNVAMDIVVDSVSVATTFKKTLAEKGIIFMSISEAIKEHPELVRKHLGTI 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DN+YAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++ADEGSY
Sbjct: 174 VPVKDNYYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQGGTGQFERTLLVADEGSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNWYPG+++GKGG+YNFVTKRG
Sbjct: 234 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWYPGNAEGKGGVYNFVTKRGL 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N QQ D+GTKM+HL K
Sbjct: 294 C-EKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNHQQADTGTKMIHLGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ GA ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 353 NTKSTIISKGISAGKSQNSYRGLVKINSGATNARNFSQCDSLLMGNECGAHTFPYIETKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 413 KTAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 473 EISLEGSVG 481
>gi|260910871|ref|ZP_05917515.1| FeS assembly protein SufB [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635022|gb|EEX53068.1| FeS assembly protein SufB [Prevotella sp. oral taxon 472 str.
F0295]
Length = 483
Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats.
Identities = 300/490 (61%), Positives = 385/490 (78%), Gaps = 8/490 (1%)
Query: 1 MVAVRETVDK-VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V+ + VR + +Y++GF T+++ D KGLNED++R IS+KKNEP+W+L +RL
Sbjct: 1 MEEVKNEKNAYVRSVAEQKYEFGFTTDVETDIIEKGLNEDVVRLISSKKNEPEWLLAFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A+ W T++ P+WA + P ID+ + YYA P + ++DPEL +T++KLGIP+
Sbjct: 61 KAFNHWKTLEQPNWAHVNLPEIDYQGISYYADPMAKKPAN--KELDPELEKTFDKLGIPL 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ +L G VAVDA+ DSVSV TTFKE+L + GVIF I EA+ EHP+LV++YL +
Sbjct: 119 EERLVLGG-----VAVDAIMDSVSVKTTFKEKLAEKGVIFSSIGEAVQEHPELVRQYLGS 173
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN++AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +
Sbjct: 174 VVPYSDNYFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDT 233
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG++N VTKRG
Sbjct: 234 YVSYLEGCTAPMRDENQLHAAIVEIIVKDNAEVKYSTVQNWYPGDEHGKGGVFNLVTKRG 293
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
D RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +QQ D+GTKM+H+
Sbjct: 294 DLRGVNSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNYQQADTGTKMIHMG 353
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++
Sbjct: 354 KNTKSTIISKGISAGRSQNSYRGLVRATANADNARNYSSCDSLLLGDKCGAHTFPYMDIH 413
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEATTSKIS+ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL
Sbjct: 414 NDTAIIEHEATTSKISEAQLFYCNQRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEAQKL 473
Query: 480 IDISLEGSVG 489
+ +SLEG+VG
Sbjct: 474 LSVSLEGTVG 483
>gi|302344945|ref|YP_003813298.1| FeS assembly protein SufB [Prevotella melaninogenica ATCC 25845]
gi|302150098|gb|ADK96360.1| FeS assembly protein SufB [Prevotella melaninogenica ATCC 25845]
Length = 481
Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats.
Identities = 295/489 (60%), Positives = 381/489 (77%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + V+K+ +Y++GF T++ + PKGLNED++R IS KK EP+W+L++RL
Sbjct: 1 MSENKNN-EFVKKVAEQKYEFGFTTDVHTEVIPKGLNEDVVRLISQKKGEPEWLLDFRLK 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W T+ P+W + P + D+ YYA P + ++DPEL +T++KLGIP+
Sbjct: 60 AFRYWQTLPIPTWGHLHLPELHLQDISYYADPLAKKPKN--KEIDPELAKTFDKLGIPLE 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDA+ DSVSV TTFK++L + G+IF I EA+ EHPDL++KYL +V
Sbjct: 118 ERLALSGT-----AVDAIMDSVSVKTTFKKQLAEKGIIFCSIGEAVQEHPDLIRKYLGSV 172
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+ AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLI+AD+ SY
Sbjct: 173 VPYRDNYSAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAVNTGQFERTLIVADDDSY 232
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVE+V LDNAE+KYSTVQNWYPGD GKGG+ N VTKRG+
Sbjct: 233 VSYLEGCTAPMRDENQLHAAVVEIVVLDNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGE 292
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
RG+ SK+SWTQ+ETGSAITWKYPSC+L+G+ S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 293 LRGVNSKLSWTQVETGSAITWKYPSCVLKGDNSQAEFYSVAVTNNYQEADTGTKMIHMGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N
Sbjct: 353 NTKSTIISKGISAGHSQNSYRGLVRATANAENARNYSSCDSLLLGSDCGAHTFPYMDIHN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 413 DTAIVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
++LEG+VG
Sbjct: 473 SVTLEGTVG 481
>gi|288801644|ref|ZP_06407086.1| FeS assembly protein SufB [Prevotella melaninogenica D18]
gi|288335686|gb|EFC74119.1| FeS assembly protein SufB [Prevotella melaninogenica D18]
Length = 493
Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats.
Identities = 296/489 (60%), Positives = 381/489 (77%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + V+K+ +Y++GF T++ + PKGLNED++R IS KK EP+W+L++RL
Sbjct: 13 MSENKNN-EFVKKVAEQKYEFGFTTDVHTEVIPKGLNEDVVRLISQKKGEPEWLLDFRLK 71
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W T+ P+W + P + D+ YYA P + ++DPEL +T++KLGIP+
Sbjct: 72 AFRYWQTLPIPTWGHLHLPELHLQDISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLE 129
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDA+ DSVSV TTFK++L + G+IF I EA+ EHPDLV+KYL +V
Sbjct: 130 ERLALSGT-----AVDAIMDSVSVKTTFKKQLAEKGIIFCSIGEAVQEHPDLVRKYLGSV 184
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+ AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLI+AD+ SY
Sbjct: 185 VPYRDNYSAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAVNTGQFERTLIVADDDSY 244
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVE+V LDNAE+KYSTVQNWYPGD GKGG+ N VTKRG+
Sbjct: 245 VSYLEGCTAPMRDENQLHAAVVEIVVLDNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGE 304
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
RG+ SK+SWTQ+ETGSAITWKYPSC+L+G+ S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 305 LRGVNSKLSWTQVETGSAITWKYPSCVLKGDNSQAEFYSVAVTNNYQEADTGTKMIHMGK 364
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N
Sbjct: 365 NTKSTIISKGISAGHSQNSYRGLVRATANAENARNYSSCDSLLLGSDCGAHTFPYMDIHN 424
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 425 DTAIVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLL 484
Query: 481 DISLEGSVG 489
++LEG+VG
Sbjct: 485 SVTLEGTVG 493
>gi|134301878|ref|YP_001121847.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis WY96-3418]
gi|134049655|gb|ABO46726.1| FeS assembly protein SufB [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 481
Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats.
Identities = 335/482 (69%), Positives = 400/482 (82%), Gaps = 4/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF TNI+ + GLNED+IR ISA+KNE +++LEWRL AY +WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + YP IDF + YY++PKS P+SLD+VDPE++ TY KLGIP+ EQE+LAG
Sbjct: 63 KSPKWADLNYPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--RNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGC
Sbjct: 181 FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCH-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + AA++RNF+QCDSLLIG+NCGAHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT SKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEAQKL+++SLEG+
Sbjct: 420 EATISKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGA 479
Query: 488 VG 489
VG
Sbjct: 480 VG 481
>gi|312282597|dbj|BAJ34164.1| unnamed protein product [Thellungiella halophila]
Length = 566
Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats.
Identities = 295/490 (60%), Positives = 360/490 (73%), Gaps = 7/490 (1%)
Query: 2 VAVRETVDKVRKIDVDQY--KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
V T + Y KYGF I PKGL+E+ IR IS KNEPDWMLE+R
Sbjct: 82 PTVSSTDKLKQYFQNQDYDKKYGFVEEIDSFTIPKGLSEETIRSISKLKNEPDWMLEFRF 141
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY ++L +++P W+ RYP+I+F D+ YY+APK SLD+ +P+LL ++KLG+P+
Sbjct: 142 KAYAKFLKLEEPKWSDNRYPSINFQDMCYYSAPKKKPTLNSLDEANPQLLEYFDKLGVPL 201
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LA VAVDAV DSVS+ TT ++ L+KSGVIF PISEAI E+PDL+KKYL
Sbjct: 202 TEQKRLA-----NVAVDAVLDSVSIATTHRKTLEKSGVIFCPISEAIREYPDLIKKYLGR 256
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN+YAALNSAVF+DGSF YIPK RCPM +STYFRIN TGQFERTLI+A+EGS
Sbjct: 257 VVPSDDNYYAALNSAVFSDGSFCYIPKNTRCPMPISTYFRINAMETGQFERTLIVAEEGS 316
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+V YLEGCTAP D NQLHAAVVEL + AEIKYSTVQNWY GD +GKGGIYNFVTKRG
Sbjct: 317 FVEYLEGCTAPSYDTNQLHAAVVELYCGEGAEIKYSTVQNWYAGDEEGKGGIYNFVTKRG 376
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G RSKISWTQ+ETGSAITWKYPS +L G+ S GEFYS+A++N +QQ D+GTKM+H
Sbjct: 377 LCAGDRSKISWTQVETGSAITWKYPSVVLEGDDSVGEFYSVALTNNYQQADTGTKMIHKG 436
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRI+SKGISAG S N YRG V V A +++N + CDS+LIG+ A+T PYI+ K
Sbjct: 437 KNTKSRIISKGISAGHSRNCYRGLVQVQSKAENAKNTSTCDSMLIGDKAAANTYPYIQVK 496
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +EHEA+TSKI ++ LFY QRGI E A+A +++GF R+V KLP EF E +L
Sbjct: 497 NPSAKVEHEASTSKIGEDQLFYFQQRGIDHERALAAMISGFCRDVFNKLPDEFGAEVNQL 556
Query: 480 IDISLEGSVG 489
+ I LEGSVG
Sbjct: 557 MSIKLEGSVG 566
>gi|282879390|ref|ZP_06288133.1| FeS assembly protein SufB [Prevotella buccalis ATCC 35310]
gi|281298503|gb|EFA90929.1| FeS assembly protein SufB [Prevotella buccalis ATCC 35310]
Length = 494
Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats.
Identities = 307/490 (62%), Positives = 385/490 (78%), Gaps = 8/490 (1%)
Query: 1 MVAVRETV-DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V T + VRK+ +Y++GF T++ + KGLNED+IR IS KK EP+WMLE+RL
Sbjct: 12 MEEVNNTNNEYVRKLTEQKYEFGFTTDVHTEIIEKGLNEDVIRLISDKKGEPEWMLEFRL 71
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AYR WLTM PSW + P I++ ++ YYA P + ++DPEL +T++KLGIP+
Sbjct: 72 KAYRHWLTMTQPSWGHVTLPDINYQEISYYADPMAKKPAN--KELDPELEKTFDKLGIPL 129
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L+G AVDA+ DSVSV TTFKE+LK+ GVIF + EAI EH LV++YL T
Sbjct: 130 EERLALSGT-----AVDAIMDSVSVKTTFKEKLKEKGVIFCSMGEAIKEHSALVRQYLGT 184
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNF+AALNSAVF+DGSFV+IPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +
Sbjct: 185 VVPYHDNFFAALNSAVFSDGSFVFIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDA 244
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA+VE++ ++NAE+KYSTVQNWYPGD GKGG+ N VTKRG
Sbjct: 245 YVSYLEGCTAPMRDENQLHAAIVEIIVMNNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRG 304
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
DCRG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N Q+ D+GTKM+H+
Sbjct: 305 DCRGVNSKLSWTQVETGSAITWKYPSCILRGDGSQAEFYSVAVTNHHQEADTGTKMIHMG 364
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNTTS I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++
Sbjct: 365 KNTTSTIISKGISAGHSQNSYRGLVRATANADNARNYSSCDSLLLGSECGAHTFPYMDIH 424
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL
Sbjct: 425 NDSAIVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKEVLNKLPMEFAVEAQKL 484
Query: 480 IDISLEGSVG 489
+ +SLEG+VG
Sbjct: 485 LSVSLEGTVG 494
>gi|256422370|ref|YP_003123023.1| FeS assembly protein SufB [Chitinophaga pinensis DSM 2588]
gi|256037278|gb|ACU60822.1| FeS assembly protein SufB [Chitinophaga pinensis DSM 2588]
Length = 481
Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats.
Identities = 316/486 (65%), Positives = 380/486 (78%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+R + + + I +Y++GF T+I+++ AP GLNED IRFISAKK EP+WMLEWRL ++
Sbjct: 1 MRNSNEIIDDIANREYEFGFTTDIEMEMAPVGLNEDTIRFISAKKEEPEWMLEWRLKGFQ 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ M+ P W P +D L YYAAPK SLD+VDPELL T+EKLGIPI EQ+
Sbjct: 61 AFKKMQFPKWQHFEMPELDLQKLSYYAAPKKKKQLGSLDEVDPELLATFEKLGIPINEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAGV V V TTFK +L++ G+IF EA+ HPDLVKKYL TVVP
Sbjct: 121 ALAGVAVDVVFDSVS-----VATTFKAKLQELGIIFCSFGEAVRNHPDLVKKYLGTVVPH 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN +AALN+AVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLIIAD+ SYVSY
Sbjct: 176 SDNIFAALNAAVFSDGSFVYIPKGVRCPMELSTYFRINAENTGQFERTLIIADDNSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP+RDENQLHAAVVEL+A+D+AEIKYSTVQNWYPGD G GGIYNFVTKRG C+G
Sbjct: 236 LEGCTAPRRDENQLHAAVVELIAMDHAEIKYSTVQNWYPGDKDGNGGIYNFVTKRGICKG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPS +L+G+ + GEFYS+A++ Q D+GTK+ HL +NT
Sbjct: 296 KSSKISWTQVETGSAITWKYPSVILQGDDAEGEFYSVAVTRNKQIADTGTKIYHLGRNTR 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRI+SKGISAG S+NTYRG V V AA++RNFTQCDSLLIG+ CGAHT PYIES+NS+
Sbjct: 356 SRIISKGISAGLSDNTYRGLVQVGPRAANARNFTQCDSLLIGDRCGAHTFPYIESRNSTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ +FY QRGI E A+ALIVNG+ +EVL +LPMEFAVEA+KL+ I+
Sbjct: 416 TVEHEATTSKIGEDQIFYLNQRGIETEKAVALIVNGYAQEVLNQLPMEFAVEARKLLSIT 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|332881712|ref|ZP_08449360.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680351|gb|EGJ53300.1| FeS assembly protein SufB [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 507
Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats.
Identities = 305/482 (63%), Positives = 389/482 (80%), Gaps = 8/482 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
VR++ +Y+YGF T++Q + +GLNED++R IS+KK EP+W+LE+RL A+R W T K
Sbjct: 31 VREVAHKKYEYGFSTDVQTEIIERGLNEDVVRLISSKKEEPEWLLEFRLQAFRYWQTQKQ 90
Query: 71 PSWARIRYPAIDFDDLYYYAAPKS---IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
PSWA ++ P ID+ + YYA P GP+SLD++DPEL++T++KLGIP+ E+ L+G
Sbjct: 91 PSWAHLKMPEIDYQAISYYADPTKGMKKDGPKSLDEIDPELMKTFDKLGIPLEERLALSG 150
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
AVDAV DSVSV TTFKE+L + G+IF ISEA+ E+PDLVK+YL +VVP DN+
Sbjct: 151 T-----AVDAVMDSVSVKTTFKEKLSERGIIFCSISEAVREYPDLVKQYLGSVVPYRDNY 205
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+ D+G YVSYLEGC
Sbjct: 206 FAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVCDDGGYVSYLEGC 265
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAA+VE+V +NAE+KYSTVQNWYPGD++G+GG+ N VTKRG RG SK
Sbjct: 266 TAPMRDENQLHAAIVEIVVNENAEVKYSTVQNWYPGDAEGRGGVLNLVTKRGHLRGANSK 325
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL ++T S I+
Sbjct: 326 LSWTQVETGSAITWKYPSCILSGDHSQAEFYSVAVTNNYQQADTGTKMIHLGRDTKSTII 385
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S N+YRG V V A +RN++ CDSLL+G+ CGAHT PY++ +N + +EH
Sbjct: 386 SKGISAGKSQNSYRGLVRVAPKANGARNYSSCDSLLLGSECGAHTFPYMDVRNETAIVEH 445
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKIS+E LFYC QRGIP E A+ LIVNG+ ++V+ KLPMEFAVEAQKL+++SLEG+
Sbjct: 446 EATTSKISEEQLFYCNQRGIPTEEAVGLIVNGYAKDVINKLPMEFAVEAQKLLNVSLEGT 505
Query: 488 VG 489
VG
Sbjct: 506 VG 507
>gi|78778460|ref|YP_396572.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9312]
gi|78711959|gb|ABB49136.1| Iron-regulated ABC transporter membrane component SufB
[Prochlorococcus marinus str. MIT 9312]
Length = 480
Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats.
Identities = 297/479 (62%), Positives = 374/479 (78%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + + YKYGF T+I+ +K KGLNEDIIR IS KK EP ++L++RL A+++W M++
Sbjct: 7 VKDVVKEPYKYGFVTDIETEKIAKGLNEDIIRLISEKKEEPKYLLDFRLKAFKKWQKMEE 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+WA + Y I++ D+ YY+APK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 67 PNWAELGYKEINYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKL----- 121
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+ VAVDAVFDSVS+ TTF+EEL + GVIF ISEA+ H DL++KYL TVVP GDN++AA
Sbjct: 122 TNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHSDLIEKYLGTVVPAGDNYFAA 181
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV CPM+LS+YFRIN +GQFERTLIIA+E S VSYLEGCTAP
Sbjct: 182 LNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAP 241
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D N LHAAVVEL+ALD+A IKYSTVQNWY GD +G GGI+NFVTKRG C G RSKISW
Sbjct: 242 MFDTNTLHAAVVELIALDDAAIKYSTVQNWYAGDEKGVGGIFNFVTKRGKCLGKRSKISW 301
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+Q+ETGSAITWKYPSCLL GE+S GEFYS+A++N QQ D+GTKM+H+ T S IVSKG
Sbjct: 302 SQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKG 361
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A SRN++QCDS+LIG+ A+T PYI+S+ + +EHEA+
Sbjct: 362 ISAGNSINSYRGLVKMGTKAIGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEAS 421
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T +IS++ LFY RGI E AI+++V+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 422 TCRISEDQLFYLQSRGIEFEEAISMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG 480
>gi|330997784|ref|ZP_08321619.1| FeS assembly protein SufB [Paraprevotella xylaniphila YIT 11841]
gi|329569672|gb|EGG51437.1| FeS assembly protein SufB [Paraprevotella xylaniphila YIT 11841]
Length = 507
Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats.
Identities = 302/482 (62%), Positives = 387/482 (80%), Gaps = 8/482 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
VR++ +Y+YGF T++Q + +GLNED++R IS+KK EP+W+LE+RL A+R W +
Sbjct: 31 VREVAHKKYEYGFSTDVQTEIIERGLNEDVVRLISSKKEEPEWLLEFRLQAFRYWQAQEQ 90
Query: 71 PSWARIRYPAIDFDDLYYYAAPKS---IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
PSWA ++ P ID+ + YYA P GP+SLD++DPEL++T++KLGIP+ E+ L+G
Sbjct: 91 PSWAHLKIPEIDYQAISYYADPTKGMKKDGPKSLDEIDPELMKTFDKLGIPLEERLALSG 150
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
AVDAV DSVSV TTFKE+L + G+IF ISEA+ E+PDLV++YL +VVP DN+
Sbjct: 151 T-----AVDAVMDSVSVKTTFKEKLSERGIIFCSISEAVREYPDLVRQYLGSVVPYRDNY 205
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGVRCPMELSTYFRIN + TGQFERTLI+ D+G YVSYLEGC
Sbjct: 206 FAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINARNTGQFERTLIVCDDGGYVSYLEGC 265
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAA+VE+V +NAE+KYSTVQNWYPGD++G+GG+ N VTKRG RG SK
Sbjct: 266 TAPMRDENQLHAAIVEIVVNENAEVKYSTVQNWYPGDAEGRGGVLNLVTKRGHLRGANSK 325
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N +QQ D+GTKM+HL +T S I+
Sbjct: 326 LSWTQVETGSAITWKYPSCILSGDHSQAEFYSVAVTNNYQQADTGTKMIHLGCDTKSTII 385
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S N+YRG V V A +RN++ CDSLL+G+ CGAHT PY++ +N + +EH
Sbjct: 386 SKGISAGKSQNSYRGLVRVAPKADGARNYSSCDSLLLGSECGAHTFPYMDVRNETAIVEH 445
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKIS+E LFYC QRGIP E A+ LIVNG+ ++V+ KLPMEFAVEAQKL+++SLEG+
Sbjct: 446 EATTSKISEEQLFYCNQRGIPTEEAVGLIVNGYAKDVINKLPMEFAVEAQKLLNVSLEGT 505
Query: 488 VG 489
VG
Sbjct: 506 VG 507
>gi|260885287|ref|ZP_05896841.1| FeS assembly protein SufB [Prevotella tannerae ATCC 51259]
gi|260852984|gb|EEX72853.1| FeS assembly protein SufB [Prevotella tannerae ATCC 51259]
Length = 491
Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats.
Identities = 299/487 (61%), Positives = 382/487 (78%), Gaps = 7/487 (1%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + D +R+ +Y+YGF T+++ + P GLNED+IR IS KK EP+W+LE+RL A+
Sbjct: 12 TMADEKDIIRETFDKKYEYGFTTDVETEIIPTGLNEDVIRLISHKKEEPEWLLEFRLRAF 71
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
W T+ P W + PAID+ + YYA P + ++DPEL++T++KLGIP+ E+
Sbjct: 72 HYWQTLAQPEWGHVNLPAIDYQAISYYADPLKKKSGK--KEIDPELMKTFDKLGIPLEER 129
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
L+G VAVDAV DSVSV TTFK++L++ G+IF +SEA+ E+PDLV+KYL +VVP
Sbjct: 130 LALSG-----VAVDAVMDSVSVKTTFKDKLQEKGIIFCSMSEAVRENPDLVRKYLGSVVP 184
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN++AALNSAVF+DGSFVYIPKG+RCPMELS+YFRIN + TGQFERTLI+ ++G YVS
Sbjct: 185 YRDNYFAALNSAVFSDGSFVYIPKGIRCPMELSSYFRINARNTGQFERTLIVCEDGGYVS 244
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAPQRDENQLHAA+VE++ AE+KYSTVQNWYPGDS+G+GG+YN VTKRG R
Sbjct: 245 YLEGCTAPQRDENQLHAAIVEIIVEKEAEVKYSTVQNWYPGDSEGRGGVYNLVTKRGQLR 304
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SK+SWTQ+ETGSAITWKYPSC+L G+ S EFYS+A++N Q+ D+GTKM+HL KNT
Sbjct: 305 GANSKLSWTQVETGSAITWKYPSCVLMGDNSQAEFYSVAVTNHHQEADTGTKMIHLGKNT 364
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S IVSKGISAG S N+YRG V A +RN++ CDSLL+G+ CGAHT PYI+ N++
Sbjct: 365 RSTIVSKGISAGKSQNSYRGLVKCSSRADGARNYSSCDSLLLGSECGAHTFPYIDVNNNN 424
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKIS++ LFYC QRGIP EAA+ LIVNG+ +EV+ KLPMEFAVEAQKL+ +
Sbjct: 425 AIVEHEATTSKISEDQLFYCNQRGIPPEAAVDLIVNGYAKEVINKLPMEFAVEAQKLLSL 484
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 485 SLEGSVG 491
>gi|152990761|ref|YP_001356483.1| Fe-S cluster assembly protein SufB [Nitratiruptor sp. SB155-2]
gi|151422622|dbj|BAF70126.1| Fe-S cluster assembly protein SufB [Nitratiruptor sp. SB155-2]
Length = 477
Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats.
Identities = 315/482 (65%), Positives = 391/482 (81%), Gaps = 7/482 (1%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
++KV KI Y+ GFE +++ +KAP GL ED I+FIS+KKNEP+WMLE RL A+ W
Sbjct: 3 MEKVDKIINSDYELGFEIDVEEEKAPPGLTEDTIKFISSKKNEPEWMLELRLKAFHAWQK 62
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
M++P WA++ YP ID+ + Y+AAPK +SLD+VDPE+LR YEKLGIP+ EQ+ LAG
Sbjct: 63 MEEPRWAKVTYPPIDYQSISYWAAPK--KALESLDEVDPEILRAYEKLGIPLEEQKALAG 120
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAV DSVSV TTF EEL K G+IF ISEAI ++PDLVKKY+ +VVP+ DN+
Sbjct: 121 -----VAVDAVLDSVSVKTTFVEELNKLGIIFCSISEAIRDYPDLVKKYMFSVVPMTDNY 175
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DG+FVYIPKGV+CPMELSTYFRIN + TGQFERTLIIADEGSYVSY EGC
Sbjct: 176 FAALNSAVFSDGTFVYIPKGVKCPMELSTYFRINAQNTGQFERTLIIADEGSYVSYNEGC 235
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
+AP RDENQLHAAVVEL+A +A I YST+QNWYPGD +G+GGIYNFVTKRG C G SK
Sbjct: 236 SAPSRDENQLHAAVVELIAHKDAHINYSTIQNWYPGDIEGRGGIYNFVTKRGLCEGENSK 295
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
I+WTQ+ETGS ITWKYPSC+L+G+ S GEFYS+AI+ QQ D+GTKM+H+ KNT S I+
Sbjct: 296 ITWTQVETGSVITWKYPSCILKGDNSVGEFYSVAITRLAQQADTGTKMIHMGKNTKSVII 355
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISA N+YRG V +H A ++NF++CDSLLIG++CGAHT PY+ESK ++ +EH
Sbjct: 356 SKGISAQKGQNSYRGLVKIHENAKGAKNFSECDSLLIGDSCGAHTFPYLESKCANAEVEH 415
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKIS+E LFY QRG+ EE A+++IV+GF ++VL KLPMEFAVEA+ L+D++LEGS
Sbjct: 416 EATTSKISEEQLFYLRQRGVSEEDAVSMIVHGFCKDVLSKLPMEFAVEAKALLDLTLEGS 475
Query: 488 VG 489
VG
Sbjct: 476 VG 477
>gi|91216153|ref|ZP_01253121.1| hypothetical protein P700755_05729 [Psychroflexus torquis ATCC
700755]
gi|91185670|gb|EAS72045.1| hypothetical protein P700755_05729 [Psychroflexus torquis ATCC
700755]
Length = 481
Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats.
Identities = 317/489 (64%), Positives = 392/489 (80%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + ++ +++ +Y+YGF T ++ D P GLNED++ IS KK EPDWM +WRL
Sbjct: 1 MAYTEQELE--KELQNKEYEYGFYTEMESDTFPPGLNEDVVIGISKKKEEPDWMTQWRLD 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYR WLTMK+P WA I Y D+ + YY+AP + SLD+VDPE+L T++KLGI I
Sbjct: 59 AYRHWLTMKEPDWANIGYEKPDYQAISYYSAPGTKPKYDSLDEVDPEMLETFKKLGISID 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAG VA+D V DS+SV TTFK+ L + G+IF ISEAI E+P+L+KKY+ +V
Sbjct: 119 EQKKLAG-----VAMDVVIDSISVTTTFKKTLAEKGIIFCSISEAIQEYPELIKKYMGSV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN++AALNSAVF DGSF YIPKGVRCPMELSTYFRIN+ TGQFERTL+IA++ SY
Sbjct: 174 VPTSDNYFAALNSAVFGDGSFCYIPKGVRCPMELSTYFRINQANTGQFERTLVIAEDSSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALDNAEIKYSTVQNWYPG+ +G GG++NFVTKRG
Sbjct: 234 VSYLEGCTAPMRDENQLHAAVVELVALDNAEIKYSTVQNWYPGNKEGIGGVFNFVTKRGI 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSAITWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+H+ K
Sbjct: 294 C-EKNAKISWTQVETGSAITWKYPSCILKGDNSIGEFYSIAVTNNYQQADTGTKMIHIGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V +++GA ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 353 NTKSTIISKGISAGNSQNSYRGLVQINKGAVNARNFSQCDSLLMGNRCGAHTFPYIEAKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATT+KI ++ +FYC QRGI E AIALIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 413 KTAQVEHEATTTKIGEDQIFYCNQRGIDTEKAIALIVNGYSKDVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 473 EISLEGSVG 481
>gi|281422604|ref|ZP_06253603.1| FeS assembly protein SufB [Prevotella copri DSM 18205]
gi|281403274|gb|EFB33954.1| FeS assembly protein SufB [Prevotella copri DSM 18205]
Length = 483
Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats.
Identities = 304/490 (62%), Positives = 382/490 (77%), Gaps = 8/490 (1%)
Query: 1 MVA-VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M +E V+ + +Y+YGF T++ + KGLNED++R IS KK EPDWMLE+RL
Sbjct: 1 MAEKEKEQNQVVKDVIDQKYEYGFTTDVHTEIIEKGLNEDVVRLISQKKGEPDWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY W T+K+P W + P ID+ ++ YYA P + ++DPEL +T++KLGIP+
Sbjct: 61 KAYNYWKTLKEPKWGHVHVPPIDYQEISYYADPLAKKPKN--KEIDPELEKTFDKLGIPL 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L+G AVDA+ DSVSV TTFKE+L++ GVIF I EA+ EHPDLV++YL T
Sbjct: 119 EERLALSGT-----AVDAIMDSVSVKTTFKEKLREKGVIFCSIGEAVKEHPDLVREYLGT 173
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNFYAALNS VF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLIIAD+ +
Sbjct: 174 VVPYRDNFYAALNSCVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIIADDDA 233
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG+ N VTKRG
Sbjct: 234 YVSYLEGCTAPMRDENQLHAAIVEIIVKDNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRG 293
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
D RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+
Sbjct: 294 DLRGVNSKLSWTQVETGSAITWKYPSCILRGDNSVAEFYSVAVTNNYQEADTGTKMIHMG 353
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY+++
Sbjct: 354 KNTKSTIISKGISAGHSQNSYRGLVRATSNADNARNYSSCDSLLLGSDCGAHTFPYMDAH 413
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL
Sbjct: 414 NDTAVFEHEATTSKISEDQLFYCNQRGIPTEEAVGLIVNGYAKDVLNKLPMEFAVEAQKL 473
Query: 480 IDISLEGSVG 489
+ +SLEG+VG
Sbjct: 474 LSVSLEGTVG 483
>gi|15234447|ref|NP_192386.1| ATABC1 (ATP BINDING CASSETTE PROTEIN 1); ATPase, coupled to
transmembrane movement of substances / protein binding /
transporter [Arabidopsis thaliana]
gi|75216473|sp|Q9ZS97|AB8I_ARATH RecName: Full=UPF0051 protein ABCI8, chloroplastic; AltName:
Full=ABC transporter I family member 8; Short=ABC
transporter ABCI.8; Short=AtABCI8; AltName:
Full=Non-intrinsic ABC protein 1; Short=Protein ABC1;
AltName: Full=Plastid sufB-like protein; AltName:
Full=Protein LONG AFTER FAR-RED 6; Flags: Precursor
gi|4115931|gb|AAD03441.1| contains similarity to Guillardia theta ABC transporter
(GB:AF041468) [Arabidopsis thaliana]
gi|7267235|emb|CAB80842.1| putative ABC transporter [Arabidopsis thaliana]
gi|15529143|gb|AAK97666.1| AT4g04770/T4B21_16 [Arabidopsis thaliana]
gi|15912265|gb|AAL08266.1| AT4g04770/T4B21_16 [Arabidopsis thaliana]
gi|22655482|gb|AAM98333.1| At4g04770/T4B21_16 [Arabidopsis thaliana]
gi|38175819|tpg|DAA01952.1| TPA_exp: putative ABC transporter 1 [Arabidopsis thaliana]
gi|332657023|gb|AEE82423.1| UPF0051 protein ABCI8 [Arabidopsis thaliana]
Length = 557
Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats.
Identities = 295/478 (61%), Positives = 359/478 (75%), Gaps = 6/478 (1%)
Query: 12 RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+ +D D+ KYGF +I PKGL+E+ IR IS K EPDWMLE+R AY ++L +++P
Sbjct: 86 QNLDYDK-KYGFVEDIDSFTIPKGLSEETIRLISKLKEEPDWMLEFRFKAYAKFLKLEEP 144
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
W+ RYP+I+F D+ YY+APK SLD+VDP+LL ++KLG+P+ EQ+ LA
Sbjct: 145 KWSDNRYPSINFQDMCYYSAPKKKPTLNSLDEVDPQLLEYFDKLGVPLTEQKRLA----- 199
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
VAVDAV DSVS+ TT ++ L+KSGVIF ISEAI E+PDL+KKYL VVP DN+YAAL
Sbjct: 200 NVAVDAVIDSVSIATTHRKTLEKSGVIFCSISEAIREYPDLIKKYLGRVVPSDDNYYAAL 259
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
NSAVF+DGSF YIPK RCPM +STYFRIN TGQFERTLI+A+EGS+V YLEGCTAP
Sbjct: 260 NSAVFSDGSFCYIPKNTRCPMPISTYFRINAMETGQFERTLIVAEEGSFVEYLEGCTAPS 319
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
D NQLHAAVVEL AEIKYSTVQNWY GD QGKGGIYNFVTKRG C G RSKISWT
Sbjct: 320 YDTNQLHAAVVELYCGKGAEIKYSTVQNWYAGDEQGKGGIYNFVTKRGLCAGDRSKISWT 379
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q+ETGSAITWKYPS +L G+ S GEFYS+A++N +QQ D+GTKM+H KNT SRI+SKGI
Sbjct: 380 QVETGSAITWKYPSVVLEGDDSVGEFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGI 439
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
SAG S N YRG V V A ++N + CDS+LIG+ A+T PYI+ KN S +EHEA+T
Sbjct: 440 SAGHSRNCYRGLVQVQSKAEGAKNTSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEAST 499
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SKI ++ LFY QRGI E A+A +++GF R+V KLP EF E +L+ I LEGSVG
Sbjct: 500 SKIGEDQLFYFQQRGIDHERALAAMISGFCRDVFNKLPDEFGAEVNQLMSIKLEGSVG 557
>gi|11465706|ref|NP_053850.1| putative ABC transporter [Porphyra purpurea]
gi|1723328|sp|P51240|YCF24_PORPU RecName: Full=UPF0051 protein ycf24; AltName: Full=ORF487
gi|1276706|gb|AAC08126.1| hypothetical chloroplast ORF 24 [Porphyra purpurea]
Length = 487
Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats.
Identities = 289/492 (58%), Positives = 382/492 (77%), Gaps = 8/492 (1%)
Query: 1 MVAVRETVDKVRKID---VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
MV + + + +D YKYGF T+++ ++ P+G++ ++++ IS KKNEP+++L +
Sbjct: 1 MVNTQNQISQTSDLDYIVNQPYKYGFTTSVESEQFPRGISREVVKLISKKKNEPEYLLNF 60
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL AY +W MK+P WA +++P IDF+ + YYA PK SLD+VDPE+L T+ KLGI
Sbjct: 61 RLKAYEKWTKMKNPKWAHLKHPNIDFNSIIYYAVPKLKKELNSLDEVDPEILDTFNKLGI 120
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ EQ+ L+ VAVDAVFDSVS+ TTFK+EL ++GVIF ISEAI +PDL++KYL
Sbjct: 121 SLNEQKRLS-----NVAVDAVFDSVSIATTFKKELAEAGVIFCSISEAIRNYPDLIQKYL 175
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TVVP GDN++AALNSAVF+DGSF YIP CP+ELSTYFRIN + +GQFERTLI+AD
Sbjct: 176 GTVVPSGDNYFAALNSAVFSDGSFCYIPPDTVCPLELSTYFRINNEESGQFERTLIVADR 235
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS VSYLEGCTAPQ D NQLHAA+VEL+ALD+AEIKYSTVQNWY G+ GKGGIYNFVTK
Sbjct: 236 GSKVSYLEGCTAPQYDTNQLHAAIVELIALDDAEIKYSTVQNWYAGNKDGKGGIYNFVTK 295
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
RG C G SKISWTQ+ETGSAITWKYP C+L G+ S GEFYS+A++N +Q+ D+GTKM+H
Sbjct: 296 RGLCSGKNSKISWTQVETGSAITWKYPGCILAGDNSQGEFYSVALTNNYQEADTGTKMIH 355
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ NT S+I+SKGISAG S N+YRG V + + +SRN++QCDSLLIG + A+T PYI+
Sbjct: 356 IGNNTKSKIISKGISAGKSKNSYRGLVKIGPQSFNSRNYSQCDSLLIGQSSQANTFPYIQ 415
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N + +EHEA+TSKIS++ +FY LQRGI E +++L+++GF ++V +LPMEFAVEA
Sbjct: 416 VQNPTAKVEHEASTSKISEDQIFYFLQRGINLEESVSLMISGFCKDVFNELPMEFAVEAD 475
Query: 478 KLIDISLEGSVG 489
+L+ + LEG+VG
Sbjct: 476 RLLSLKLEGTVG 487
>gi|282892128|ref|ZP_06300603.1| hypothetical protein pah_c207o067 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498023|gb|EFB40367.1| hypothetical protein pah_c207o067 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 489
Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats.
Identities = 298/478 (62%), Positives = 385/478 (80%), Gaps = 6/478 (1%)
Query: 13 KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
YKYGF TN++ D KGLNED+IR +S KKNEP +ML++RL AY++WL M++P
Sbjct: 17 NFQDSDYKYGFVTNVETDSFAKGLNEDVIRALSEKKNEPAFMLDFRLKAYQKWLEMEEPH 76
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W YP ID+ ++ YY+APK +SL+DVDPE+L+T+++LGIP+ EQ LA
Sbjct: 77 WLNANYPPIDYQNIRYYSAPKMKPQHESLEDVDPEVLKTFQRLGIPLDEQMRLA-----N 131
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
VAVD VFDSVS+ TTFK++L ++GV+ ISEAI ++P+LV+KY+ +VVP+GDNF+AALN
Sbjct: 132 VAVDMVFDSVSIGTTFKKKLDEAGVVLCSISEAIQKYPELVEKYMGSVVPIGDNFFAALN 191
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
SAVFTDGSFVY+PKGV PMELSTYFRIN+K +GQFERTLIIA++ S+VSYLEGCTAP
Sbjct: 192 SAVFTDGSFVYVPKGVISPMELSTYFRINDKESGQFERTLIIAEDDSFVSYLEGCTAPAY 251
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWT 311
D NQLHAAVVELVALD A+IKY+TVQNWY G+ G+GG+YNFVTKRG C G+ SKISWT
Sbjct: 252 DNNQLHAAVVELVALDRAQIKYATVQNWYAGNPKTGEGGVYNFVTKRGRCAGVHSKISWT 311
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q+E G+AITWKYPSC+L+G+ S GEFYS+A++NG Q D+GTKM+HL KNT+S I+SKGI
Sbjct: 312 QVEVGAAITWKYPSCILQGDNSIGEFYSVALTNGKMQADTGTKMIHLGKNTSSTIISKGI 371
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
SA S+N+YRG V V A +RN+TQCDS+L+G+ C A+T PYIE NS+ ++EHEA+T
Sbjct: 372 SADSSHNSYRGLVKVAPRAEGARNYTQCDSMLVGDQCTANTFPYIEVGNSTGSVEHEAST 431
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SK+++E LFY QRGI +E AI++IVNGF ++V+++LP+EFAVEAQKL+ + LE SVG
Sbjct: 432 SKLNEEQLFYFRQRGISQEDAISMIVNGFCKDVIRELPLEFAVEAQKLLTLKLENSVG 489
>gi|297813861|ref|XP_002874814.1| ATABC1 [Arabidopsis lyrata subsp. lyrata]
gi|297320651|gb|EFH51073.1| ATABC1 [Arabidopsis lyrata subsp. lyrata]
Length = 556
Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats.
Identities = 293/478 (61%), Positives = 359/478 (75%), Gaps = 6/478 (1%)
Query: 12 RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+ +D D+ KYGF +I PKGL+E+ IR IS K EPDWMLE+R AY ++L +++P
Sbjct: 85 QNLDYDK-KYGFVEDIDSFTIPKGLSEETIRLISKLKEEPDWMLEFRFKAYAKFLKLEEP 143
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
W+ RYP+I+F D+ YY+APK SLD+ DP+LL ++KLG+P+ EQ+ LA
Sbjct: 144 KWSDNRYPSINFQDMCYYSAPKKKPTLNSLDEADPQLLEYFDKLGVPLTEQKRLA----- 198
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
VAVDAV DSVS+ TT ++ L+KSGVIF ISEAI E+PDL+KKYL VVP DN+YA+L
Sbjct: 199 NVAVDAVLDSVSIATTHRKTLEKSGVIFCSISEAIREYPDLIKKYLGRVVPSDDNYYASL 258
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
NSAVF+DGSF YIPK RCPM +STYFRIN TGQFERTLI+A+EGS+V YLEGCTAP
Sbjct: 259 NSAVFSDGSFCYIPKNTRCPMPISTYFRINAMETGQFERTLIVAEEGSFVEYLEGCTAPS 318
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
D NQLHAAVVEL AEIKYSTVQNWY GD QGKGGIYNFVTKRG C G RSKISWT
Sbjct: 319 YDTNQLHAAVVELYCGKGAEIKYSTVQNWYAGDEQGKGGIYNFVTKRGLCAGDRSKISWT 378
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q+ETGSAITWKYPS +L G+ S GEFYS+A++N +QQ D+GTKM+H KNT SRI+SKGI
Sbjct: 379 QVETGSAITWKYPSVVLEGDDSVGEFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGI 438
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
SAG S N YRG V V A +++N + CDS+LIG+ A+T PYI+ KN S +EHEA+T
Sbjct: 439 SAGHSRNCYRGLVQVQSKAENAKNTSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEAST 498
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SKI ++ LFY QRGI E A+A +++GF R+V KLP EF E +L+ I LEGSVG
Sbjct: 499 SKIGEDQLFYFQQRGIDHERALAAMISGFCRDVFNKLPDEFGAEVNQLMSIKLEGSVG 556
>gi|332292137|ref|YP_004430746.1| FeS assembly protein SufB [Krokinobacter diaphorus 4H-3-7-5]
gi|332170223|gb|AEE19478.1| FeS assembly protein SufB [Krokinobacter diaphorus 4H-3-7-5]
Length = 481
Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats.
Identities = 322/489 (65%), Positives = 397/489 (81%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + D ++ +Y+YGF T+I+ + P GLNEDIIR IS KK+EP WM EWRL
Sbjct: 1 MAYTED--DLREELKTKEYEYGFFTDIESETFPVGLNEDIIRAISKKKDEPQWMTEWRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY+ WL+M++P WA + Y DF + YY+AP ++ ++LDDVDP+LL Y+KLGI +
Sbjct: 59 AYKVWLSMEEPDWANVNYEKPDFQAIAYYSAPVAVDPNKTLDDVDPDLLAMYKKLGISVD 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ + + +A+D V DSVSV TTFK+ L + G+IFM ISEAI EHP+LV+K+L T+
Sbjct: 119 EQKKM-----NNIAMDIVVDSVSVATTFKKTLAEKGIIFMSISEAIKEHPELVRKHLGTI 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VPV DN+YAALNSAVF+DGSF YIPKGV+CPMELSTYFRIN+ GTGQFERTL++ADEGSY
Sbjct: 174 VPVKDNYYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQGGTGQFERTLLVADEGSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+A+D+AEIKYSTVQNWYPG+++GKGG+YNFVTKRG
Sbjct: 234 VSYLEGCTAPSRDENQLHAAVVELIAMDDAEIKYSTVQNWYPGNAEGKGGVYNFVTKRGL 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N QQ D+GTKM+HL K
Sbjct: 294 C-EKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNHQQADTGTKMIHLGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ GA ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 353 NTKSTIISKGISAGKSQNSYRGLVKINAGATNARNFSQCDSLLMGNECGAHTFPYIETKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 413 KTAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 473 EISLEGSVG 481
>gi|187931696|ref|YP_001891680.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712605|gb|ACD30902.1| sufS activator complex, sufB subunit [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 480
Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats.
Identities = 334/481 (69%), Positives = 400/481 (83%), Gaps = 4/481 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF TNI+ + GLNED+IR ISA+KNE +++LEWRL AY +WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + YP IDF + YY++PKS P+SLD+VDPE++ TY KLGIP+ EQ++LAG
Sbjct: 63 KSPKWADLNYPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIPLHEQKMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--RNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGC
Sbjct: 181 FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCH-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + AA++RNF+QCDSLLIG+NCGAHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCGAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEAQKL+++SLEG+
Sbjct: 420 EATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGA 479
Query: 488 V 488
V
Sbjct: 480 V 480
>gi|149369536|ref|ZP_01889388.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
gi|149356963|gb|EDM45518.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
Length = 482
Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats.
Identities = 325/489 (66%), Positives = 390/489 (79%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E D ++++ +Y+YGF T+I+ + P GLNEDI+R IS KK EP WM +WRL
Sbjct: 1 MSKYTE-DDLKKELETKEYEYGFYTDIESETFPIGLNEDIVRAISKKKEEPQWMTDWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
++R W TM++P WA + Y DF + YY+AP S+DDVDPELL T+ KLGI +
Sbjct: 60 SFRYWKTMEEPEWANVHYDKPDFQAISYYSAPNGKPKYDSIDDVDPELLETFNKLGISLD 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAG VA+D V DSVSV TTFK L + G+IF ISEAI EHP+LV+KY+ +V
Sbjct: 120 EQKKLAG-----VAMDVVVDSVSVATTFKSTLAEKGIIFCSISEAIKEHPELVRKYIGSV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ TGQFERTL++ADEGSY
Sbjct: 175 VPQKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQANTGQFERTLVVADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVELVALD+AEIKYSTVQNW+PG+ +GKGG+YNFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELVALDDAEIKYSTVQNWFPGNKEGKGGVYNFVTKRGI 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N FQQ D+GTKM+H+ K
Sbjct: 295 C-EKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNFQQADTGTKMIHIGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++R A ++RNF+QCDSLL+GN CGAHT PYIE+ N
Sbjct: 354 NTRSTIISKGISAGKSQNSYRGLVKINRNADNARNFSQCDSLLMGNACGAHTFPYIEADN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 414 KSAQVEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|260591776|ref|ZP_05857234.1| FeS assembly protein SufB [Prevotella veroralis F0319]
gi|260536060|gb|EEX18677.1| FeS assembly protein SufB [Prevotella veroralis F0319]
Length = 481
Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats.
Identities = 295/489 (60%), Positives = 379/489 (77%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + V+K+ +Y++GF T++ + PKGLNEDI+R IS KK EP+W+L++RL
Sbjct: 1 MSENKNN-EFVKKVAEQKYEFGFTTDVHTEVIPKGLNEDIVRLISQKKGEPEWLLDFRLK 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ W + P+W + P + D+ YYA P + ++DPEL +T++KLGIP+
Sbjct: 60 AFHYWEALPIPTWGHLHLPDLHLQDISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLE 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDA+ DSVSV TTFK++L + G+IF I EA+ EHPDLV+KYL +V
Sbjct: 118 ERLALSGT-----AVDAIMDSVSVKTTFKKQLAEKGIIFCSIGEAVKEHPDLVRKYLGSV 172
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+ AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLI+AD+ SY
Sbjct: 173 VPYRDNYSAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAINTGQFERTLIVADDDSY 232
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVE+V LDNAE+KYSTVQNWYPGD GKGG+ N VTKRG+
Sbjct: 233 VSYLEGCTAPMRDENQLHAAVVEIVVLDNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGE 292
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
RG+ SK+SWTQ+ETGSAITWKYPSC+L+G+ S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 293 LRGVNSKLSWTQVETGSAITWKYPSCVLKGDNSQAEFYSVAVTNNYQEADTGTKMIHMGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N
Sbjct: 353 NTKSTIISKGISAGHSQNSYRGLVRATANAENARNYSSCDSLLLGSDCGAHTFPYMDIHN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 413 DTAIVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
++LEG+VG
Sbjct: 473 SVTLEGTVG 481
>gi|300727481|ref|ZP_07060872.1| FeS assembly protein SufB [Prevotella bryantii B14]
gi|299775184|gb|EFI71785.1| FeS assembly protein SufB [Prevotella bryantii B14]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats.
Identities = 300/489 (61%), Positives = 383/489 (78%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M ++ + VR++ +Y+YGF T++ + P GLNEDI+R IS KK EP+WML++RL
Sbjct: 1 MAETQQN-EFVREVAEKKYEYGFTTDVHTEIIPNGLNEDIVRLISQKKGEPEWMLDFRLK 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AY W T++ PSW + P ID+ + YYA P + ++DPEL +T++KLGIP+
Sbjct: 60 AYNYWKTLEQPSWGHVHVPEIDYQAISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLE 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDA+ DSVSV TTFKE+L + GVIF I EA+ HPDLV+KYL TV
Sbjct: 118 ERLALSGT-----AVDAIMDSVSVKTTFKEKLAEKGVIFCSIGEAVKSHPDLVQKYLGTV 172
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN++AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +Y
Sbjct: 173 VPYRDNYFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDAY 232
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAA+VE++ ++NAE+KYSTVQNWYPGD GKGG+ N VTKRGD
Sbjct: 233 VSYLEGCTAPMRDENQLHAAIVEIIVMNNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGD 292
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
RG SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 293 LRGTNSKLSWTQVETGSAITWKYPSCILRGDYSQAEFYSVAVTNNYQEADTGTKMIHMGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+NCGAHT PY++ N
Sbjct: 353 NTKSTIISKGISAGHSQNSYRGLVRATSTADNARNYSSCDSLLLGSNCGAHTFPYMDIHN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 413 NTAVVEHEATTSKISEDQLFYCNQRGIPTEEAVGLIVNGYAKDVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
+SLEG+VG
Sbjct: 473 SVSLEGTVG 481
>gi|282859026|ref|ZP_06268162.1| FeS assembly protein SufB [Prevotella bivia JCVIHMP010]
gi|282588194|gb|EFB93363.1| FeS assembly protein SufB [Prevotella bivia JCVIHMP010]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats.
Identities = 293/489 (59%), Positives = 381/489 (77%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + V+K+ +Y++GF T++ + PKGLNED++R ISAKK EP+W+LE+RL
Sbjct: 1 MSDNKNN-EYVKKVAEQKYEFGFTTDVHTEVIPKGLNEDVVRLISAKKGEPEWLLEFRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W T+ P+W + P + ++ YYA P + ++DPEL +T++KLGIP+
Sbjct: 60 AFRYWQTLPIPTWGHLTLPELHLQEISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLE 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDAV DSVSV TTFK++L + G+IF EA+ EHPDLV++YL +V
Sbjct: 118 ERLALSGT-----AVDAVMDSVSVKTTFKKQLAEKGIIFCSFGEAVKEHPDLVRQYLGSV 172
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+ +ALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLI+AD+ +Y
Sbjct: 173 VPYRDNWTSALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAVNTGQFERTLIVADDDAY 232
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVE++ ++NAE+KYSTVQNWYPGD GKGG+ N VTKRG+
Sbjct: 233 VSYLEGCTAPMRDENQLHAAVVEIIVMNNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGE 292
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 293 CRGINSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNYQEADTGTKMIHMGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++ N
Sbjct: 353 NTKSTIISKGISAGHSQNSYRGLVRATANADNARNYSSCDSLLLGSQCGAHTFPYMDIHN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI++E LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 413 DTAIVEHEATTSKINEEQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
++LEG+VG
Sbjct: 473 AVTLEGTVG 481
>gi|255554919|ref|XP_002518497.1| Protein sufB, putative [Ricinus communis]
gi|223542342|gb|EEF43884.1| Protein sufB, putative [Ricinus communis]
Length = 553
Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats.
Identities = 288/491 (58%), Positives = 368/491 (74%), Gaps = 8/491 (1%)
Query: 2 VAVRETVDKVRKIDVDQ-Y--KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
+ + DK+R+I ++ Y K+GF +I PKGL+E+ IR IS+ K EPDWMLE+R
Sbjct: 68 TSTTSSDDKIREILRNRDYDKKFGFTMDIDSYSIPKGLSEETIRLISSLKEEPDWMLEFR 127
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A+ ++L +K+P W+ RYP+IDF D+ YY+APK SLD+ DPELL +++LG+P
Sbjct: 128 LNAFEKFLKLKEPKWSDNRYPSIDFQDICYYSAPKKKPTLNSLDEADPELLMYFDRLGVP 187
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ E+ LA VAVDAV DSVS+ TT ++ L+K+GVIF ISEAI E+PDLV+KYL
Sbjct: 188 LNERNRLA-----NVAVDAVLDSVSIATTHRQTLEKAGVIFCSISEAIKEYPDLVRKYLG 242
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
VVP DN+YAALNSAVF+DGSF YIPK +CPM++STYFRIN TGQFERTLI+AD+
Sbjct: 243 RVVPSEDNYYAALNSAVFSDGSFCYIPKDTKCPMQISTYFRINAMETGQFERTLIVADDR 302
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S+V YLEGCTAP D NQLHAAVVEL + AEIKYSTVQNWY GD +G+GGIYNFVTKR
Sbjct: 303 SFVEYLEGCTAPSYDTNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGRGGIYNFVTKR 362
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G C G RSKISWTQ+ETGSAITWKYPS +L G+ + GEFYS+A++N +QQ D+GTKM+H
Sbjct: 363 GLCSGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHK 422
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT SRI+SKGISAG S N YRG V + A ++RN +QCDS+LIG+ A+T PYI+
Sbjct: 423 GKNTRSRIISKGISAGNSRNCYRGLVQIQSKAENARNLSQCDSMLIGDTAAANTYPYIQV 482
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
KN + +EHEA+TSKI ++ LFY QRGI E A+A +++GF ++V +LP EF E +
Sbjct: 483 KNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCQDVFNELPDEFGAEVNQ 542
Query: 479 LIDISLEGSVG 489
L+ + LEGSVG
Sbjct: 543 LMSLKLEGSVG 553
>gi|123965317|ref|YP_001010398.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus str. MIT 9515]
gi|123199683|gb|ABM71291.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
Length = 480
Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats.
Identities = 292/479 (60%), Positives = 373/479 (77%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + + YKYGF T+I+ +K KGLNEDIIR IS KK EP+++L +RL A+++W M +
Sbjct: 7 VKDVVSEPYKYGFVTDIETEKISKGLNEDIIRLISVKKEEPEYLLNFRLNAFKKWQKMVE 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+WA + Y ID+ D+ YY+APK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 67 PNWAELGYKKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKL----- 121
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+ VAVDAVFDSVS+ TTF++EL + GVIF ISEA+ +H DL++KYL +VVP DN++AA
Sbjct: 122 TNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDHSDLIEKYLGSVVPANDNYFAA 181
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKG++CPM+LS+YFRIN +GQFERTLIIA+E S VSYLEGCTAP
Sbjct: 182 LNSAVFSDGSFVYIPKGIKCPMDLSSYFRINSGDSGQFERTLIIAEEASSVSYLEGCTAP 241
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D N LHAAVVELVALD+A IKYSTVQNWY G+ G GGI+NFVTKRG C G RSKISW
Sbjct: 242 MFDTNTLHAAVVELVALDDASIKYSTVQNWYAGNEDGVGGIFNFVTKRGKCLGKRSKISW 301
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+Q+ETGSAITWKYPSCLL GE+S GEFYS+A++N Q+ D+GTKM+H+ T S IVSKG
Sbjct: 302 SQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQKADTGTKMIHIGPKTKSTIVSKG 361
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A SRN++QCDS+LIG+ A+T PYI+S+ + +EHEA+
Sbjct: 362 ISAGKSANSYRGLVKMGSKAVGSRNYSQCDSMLIGDQAAANTFPYIQSQQPNSEIEHEAS 421
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T +IS++ LFY RGI E A++++V+GF R+V +LPMEFA EA KL+ + LEGSVG
Sbjct: 422 TCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG 480
>gi|307565746|ref|ZP_07628215.1| FeS assembly protein SufB [Prevotella amnii CRIS 21A-A]
gi|307345572|gb|EFN90940.1| FeS assembly protein SufB [Prevotella amnii CRIS 21A-A]
Length = 481
Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats.
Identities = 297/489 (60%), Positives = 376/489 (76%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + V+KI +Y++GF T++ D PKGLNEDI+R ISAKK EPDW+L++RL
Sbjct: 1 MSDNKNN-EYVKKIAEQKYEFGFTTDVHTDIIPKGLNEDIVRLISAKKGEPDWLLDFRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W T+ P W + P + D+ YYA P + ++DPEL +T++KLGIP+
Sbjct: 60 AFRYWQTLPIPQWGHLTLPELHLQDISYYADPLAKKPKD--KEIDPELEKTFDKLGIPLE 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDAV DSVSV TTFK++L + G+IF EA+ EHP LV++YL +V
Sbjct: 118 ERLALSGT-----AVDAVMDSVSVKTTFKKQLAEKGIIFCSFGEAVKEHPALVRQYLGSV 172
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN+ +ALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLIIAD+ +Y
Sbjct: 173 VPYKDNWSSALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAVNTGQFERTLIIADDNAY 232
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVE++ ++NAE+KYSTVQNWYPGD GKGG+ N VTKRG+
Sbjct: 233 VSYLEGCTAPMRDENQLHAAVVEIIVMNNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRGE 292
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
CRG S +SWTQ+ETGSAITWKYPSC+LRG S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 293 CRGANSVLSWTQVETGSAITWKYPSCILRGNNSQAEFYSVAVTNNYQEADTGTKMIHIGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++ N
Sbjct: 353 NTKSTIISKGISAGHSQNSYRGLVRATANADNARNYSSCDSLLLGSKCGAHTFPYMDIHN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTSKI++E LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+
Sbjct: 413 DSAIVEHEATTSKINEEQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLL 472
Query: 481 DISLEGSVG 489
++LEG+VG
Sbjct: 473 SVTLEGTVG 481
>gi|60752251|gb|AAX36074.1| non-intrinsic ABC protein [Nicotiana benthamiana]
Length = 546
Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats.
Identities = 295/485 (60%), Positives = 368/485 (75%), Gaps = 5/485 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
D+++K YK+GF I+ PKGL+E+ ++ ISAKK+EP WMLE+RL +Y +
Sbjct: 67 TNENDQLQKFLKRDYKWGFNEKIESFALPKGLSEETVKLISAKKSEPSWMLEFRLKSYEK 126
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
++ MK+P+W+ RYP IDF D+ YY+ PK SLD+ DPEL++ ++KLG+P+ E+
Sbjct: 127 FIKMKEPNWSDNRYPDIDFQDIVYYSEPKKKPTLNSLDEADPELIKYFDKLGVPLNERNR 186
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LA VAVDAV DSVS+ TT ++ L+KSGVIF ISEAI E+PDLVKKYL VVP
Sbjct: 187 LA-----NVAVDAVLDSVSIATTHRKTLEKSGVIFCSISEAIREYPDLVKKYLGRVVPPE 241
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DNFYAALNSAVF+DGSFVYIPK RCPM++STYFRIN TGQFERT+IIA+EGS+V YL
Sbjct: 242 DNFYAALNSAVFSDGSFVYIPKNTRCPMQISTYFRINAMETGQFERTVIIAEEGSFVEYL 301
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP D NQLHAAVVEL + AEIKYSTVQNWY GD +GKGGIYNFVTKRG C G
Sbjct: 302 EGCTAPAYDTNQLHAAVVELYCDEGAEIKYSTVQNWYAGDEEGKGGIYNFVTKRGLCAGA 361
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
RSKISWTQ+ETGSAITWKYPS +L G++S GEFYS+A++N +QQ D+GTKM+H KNT S
Sbjct: 362 RSKISWTQVETGSAITWKYPSVVLEGDESVGEFYSVALTNNYQQADTGTKMIHKGKNTRS 421
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
RI+SKGISAG S N YRG V V A +++N +QCDS+LIG+ A+T PYI+SKN +
Sbjct: 422 RIISKGISAGHSRNCYRGLVQVLSNAENAKNSSQCDSMLIGDTAAANTYPYIQSKNPTAR 481
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+EHEATTSKI ++ LFY QRGI E A+A +++GF R+V +LP EF E +L+ + L
Sbjct: 482 IEHEATTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKL 541
Query: 485 EGSVG 489
EGSVG
Sbjct: 542 EGSVG 546
>gi|332520186|ref|ZP_08396650.1| FeS assembly protein SufB [Lacinutrix algicola 5H-3-7-4]
gi|332044745|gb|EGI80939.1| FeS assembly protein SufB [Lacinutrix algicola 5H-3-7-4]
Length = 482
Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats.
Identities = 330/489 (67%), Positives = 392/489 (80%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E D ++ +Y+YGF T+I+ + P GLNEDI+R IS KK EP+WM EWRL
Sbjct: 1 MSKYTE-DDLREELKTKEYEYGFYTDIESETFPVGLNEDIVRAISKKKEEPEWMTEWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++ W M++P WA + Y DF + YY+AP S SLD+VDPELL T+EKLGI I
Sbjct: 60 AFKVWKEMEEPDWANVNYQKPDFQAISYYSAPNSKPKYDSLDEVDPELLATFEKLGISID 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LA VA+D V DSVSV TTFK+ L + G+IFM ISEAI EHP+LV+K+L TV
Sbjct: 120 EQKKLA-----NVAMDVVVDSVSVATTFKKTLGEKGIIFMSISEAIKEHPELVRKHLGTV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++ADEGSY
Sbjct: 175 VPTKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVVADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNWYPG+++GKGG++NFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWYPGNAEGKGGVFNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+HL K
Sbjct: 295 C-EKNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSIAVTNNYQQADTGTKMIHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V V A ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVQVSSRAENARNFSQCDSLLMGNECGAHTFPYIEAKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 414 KSAMIEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|242620039|ref|YP_003002043.1| ABC transporter [Aureococcus anophagefferens]
gi|239997284|gb|ACS36807.1| ABC transporter [Aureococcus anophagefferens]
Length = 485
Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats.
Identities = 296/490 (60%), Positives = 383/490 (78%), Gaps = 6/490 (1%)
Query: 1 MVAVRET-VDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V+ V + +I YKYGFET I+ ++ P GL+E+ +R +S+KK EP++M + RL
Sbjct: 1 MSDVKNKGVSTIDQIVSQPYKYGFETEIEKERIPVGLDENTVRLLSSKKGEPEFMCQSRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + W + +P+WA + +P I++ D+ YY+APK +L +VDPELL+T++KLGI +
Sbjct: 61 QALKIWKNLDEPNWAELHHPEINYQDITYYSAPKKKKKLDNLSEVDPELLKTFDKLGISL 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VAVDAVFDSVS+ TTFK+EL K+GVIF P+SEA+ ++P+L+K YL
Sbjct: 121 NEQKRLS-----NVAVDAVFDSVSIATTFKKELAKAGVIFCPLSEAVQQYPELIKAYLGK 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP GDN++AALN AVF+DGSF Y+PK V+CPMELSTYFRIN++ +GQFERTLIIA++ S
Sbjct: 176 VVPAGDNYFAALNCAVFSDGSFCYVPKNVKCPMELSTYFRINDEESGQFERTLIIAEQNS 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRD+NQLHAA+VELVAL+NAEIKYSTVQNWY G+ +G+GGIYNFVTKRG
Sbjct: 236 YVSYLEGCTAPQRDKNQLHAAIVELVALENAEIKYSTVQNWYAGNEKGQGGIYNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G SKISWTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 296 LCSGKNSKISWTQIETGSAITWKYPSCILVGDSSVGEFYSVALTNNYQQADTGTKMVHIG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT S I+SKGISAG S N+YRG V + A +RNF+QCDSLLIG+ A+T PYIE K
Sbjct: 356 NNTKSTIISKGISAGNSKNSYRGLVKISPKAKGARNFSQCDSLLIGDKSNANTFPYIEVK 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS+ +EHEA+ SKI +E LFY QRGI E AI+L+++GF +V KLPMEF+VEA KL
Sbjct: 416 NSTTKVEHEASVSKIGEEQLFYFSQRGIEVEQAISLMISGFCHDVFLKLPMEFSVEADKL 475
Query: 480 IDISLEGSVG 489
+ + LEGS+G
Sbjct: 476 LSLKLEGSIG 485
>gi|254426955|ref|ZP_05040662.1| FeS assembly protein SufB [Alcanivorax sp. DG881]
gi|196193124|gb|EDX88083.1| FeS assembly protein SufB [Alcanivorax sp. DG881]
Length = 479
Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats.
Identities = 328/481 (68%), Positives = 392/481 (81%), Gaps = 7/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
++ K+ Y+ GF T + + P GL+E++IRF+SAKK EP+WMLEWRL +Y +WL M
Sbjct: 5 ELDKLIRSNYEAGFTTTVDTETLPPGLSEEVIRFLSAKKGEPEWMLEWRLDSYHKWLEMT 64
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P WA + +P ID +++ +Y+ PKS P+SLD+VDPELL TYEKLGIP+ EQE+LAG
Sbjct: 65 PPDWAHLHHPPIDVNEVSFYSKPKSLDDAPKSLDEVDPELLATYEKLGIPLHEQEMLAG- 123
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVD VFDS SV TTFKE+L ++GVIF ISEAI E+P+L++KY+ +VVP GDNFY
Sbjct: 124 ----VAVDVVFDSSSVFTTFKEKLWEAGVIFCSISEAIQEYPELIQKYMGSVVPKGDNFY 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGVRCPMELSTYFRINE TGQFERTLIIADEGSYVSYLEGCT
Sbjct: 180 AALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLIIADEGSYVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAAVVELVA+ AEIKYSTVQNWYPGD GKGGIYNFVTKRG SKI
Sbjct: 240 APQRDENQLHAAVVELVAMPGAEIKYSTVQNWYPGDENGKGGIYNFVTKRGVAH-DNSKI 298
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+S
Sbjct: 299 SWTQVETGSAITWKYPSVILRGDNSIGEFYSVALTRHMQQADTGTKMIHLGKNTKSTIIS 358
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S+NTYRG V + A ++RNFTQCDSLL+G+ CGAHT PYIESKN S +EHE
Sbjct: 359 KGISAGRSSNTYRGLVRISPRAENARNFTQCDSLLLGDTCGAHTFPYIESKNPSATIEHE 418
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSK+SD+ +F C QRGI E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEG+V
Sbjct: 419 ATTSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAV 478
Query: 489 G 489
G
Sbjct: 479 G 479
>gi|222111516|ref|YP_002553780.1| cysteine desulfurase activator complex subunit sufb [Acidovorax
ebreus TPSY]
gi|221730960|gb|ACM33780.1| FeS assembly protein SufB [Acidovorax ebreus TPSY]
Length = 497
Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats.
Identities = 318/481 (66%), Positives = 385/481 (80%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ + Y++GF T+++ D P GL+ED IR IS KK EP ++L+WRL A+ RW M+
Sbjct: 22 ALEQALQRPYQHGFVTDVESDSLPPGLDEDTIRAISRKKREPQFLLDWRLAAFERWRAME 81
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P WA ++ IDF L YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG
Sbjct: 82 LPDWAHLKIEPIDFQALSYYSAPKSLKNAPKSLDEVDPKLLETYEKLNVPLHERARLAG- 140
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTF+E+L + GVIF S A+ HP+LV+KYL TVVP GDNFY
Sbjct: 141 ----VAVDAVFDSVSVGTTFREQLAEVGVIFCSFSHAVQNHPELVEKYLGTVVPQGDNFY 196
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGV+CPMELS+YFRIN + TGQFERTLIIA+EGS VSYLEGCT
Sbjct: 197 AALNSAVFSDGSFVYIPKGVKCPMELSSYFRINAQNTGQFERTLIIAEEGSSVSYLEGCT 256
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAAVVEL+A D+A IKYSTVQNWYPGD G GGIYNFVTKRG G RS+I
Sbjct: 257 APQRDENQLHAAVVELIAHDDAFIKYSTVQNWYPGDENGVGGIYNFVTKRGLAAGRRSRI 316
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
+WTQ+ETGSAITWKYPS +LRG++S GEF+SIA+SN FQQ D+GTKM+HL KNTTSRIVS
Sbjct: 317 AWTQIETGSAITWKYPSVVLRGDESNGEFHSIAVSNHFQQADTGTKMIHLGKNTTSRIVS 376
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG ++N+YRG V V+ GAA +RN TQCDSLLIG +CGAHT PY+++ S +EHE
Sbjct: 377 KGISAGHAHNSYRGLVRVNPGAAGARNHTQCDSLLIGPDCGAHTFPYVDTARSDAVVEHE 436
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATT++IS+E LFYC QRGI + A ALIV GF + VL++LPMEFA+EA+ L+ +SLEG+V
Sbjct: 437 ATTTRISEERLFYCQQRGIDPQEATALIVGGFCQAVLEELPMEFALEAKALLAVSLEGAV 496
Query: 489 G 489
G
Sbjct: 497 G 497
>gi|302771495|ref|XP_002969166.1| ATP-binding cassette transporter, subfamily I, member 12, SmABCI12
[Selaginella moellendorffii]
gi|300163671|gb|EFJ30282.1| ATP-binding cassette transporter, subfamily I, member 12, SmABCI12
[Selaginella moellendorffii]
Length = 532
Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats.
Identities = 304/481 (63%), Positives = 369/481 (76%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ +R+ YK+GF +N+ + PKGL+E +R IS+KK EPDW+L++RL AYR+WL M
Sbjct: 57 ETIRQFLDRDYKWGFVSNVASESIPKGLDESTVRLISSKKKEPDWLLQFRLNAYRQWLKM 116
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++PSW+ YP IDF D YY APK QSLD+VDPELL T+ KLGIP+ EQ+ LA
Sbjct: 117 EEPSWSDNTYPKIDFQDFCYYTAPKQKEVKQSLDEVDPELLETFRKLGIPLTEQKRLA-- 174
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVS+ TT ++ L+ +GVIF ISEA+ P+LVKKYL +VVPV DN+Y
Sbjct: 175 ---NVAVDAVFDSVSIATTHRKTLEAAGVIFCSISEAVHRFPELVKKYLGSVVPVADNYY 231
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSF YIPK PME+STYFRIN TGQFERTLIIADE S+VSYLEGCT
Sbjct: 232 AALNSAVFSDGSFCYIPKNTVSPMEISTYFRINALETGQFERTLIIADEKSFVSYLEGCT 291
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D+NQLHAAVVEL + AEIKYSTVQNWY GD+QG+GGIYNFVTKRG C G +SKI
Sbjct: 292 APSYDKNQLHAAVVELYCAEGAEIKYSTVQNWYAGDAQGRGGIYNFVTKRGLCAGKKSKI 351
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++N QQ D+GTKM+H+ KN+ SRIVS
Sbjct: 352 SWTQVETGSAITWKYPSVILRGDDSVGEFYSVAVTNNRQQADTGTKMIHVGKNSRSRIVS 411
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N YRG V + A +SR+F+QCDS+LIGNNC A+T PY + KN S +EHE
Sbjct: 412 KGISAGESRNCYRGLVQIQPTADNSRSFSQCDSMLIGNNCVANTYPYTQDKNPSARVEHE 471
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKI ++ LFY QRGI E A+A I+ GF REV +LP+EFA E +L+ + LE SV
Sbjct: 472 ATTSKIGEDQLFYFQQRGIEPEKAVATIIGGFCREVFNELPLEFAAEVNQLMSLKLENSV 531
Query: 489 G 489
G
Sbjct: 532 G 532
>gi|302784246|ref|XP_002973895.1| hypothetical protein SELMODRAFT_173820 [Selaginella moellendorffii]
gi|300158227|gb|EFJ24850.1| hypothetical protein SELMODRAFT_173820 [Selaginella moellendorffii]
Length = 532
Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats.
Identities = 304/481 (63%), Positives = 369/481 (76%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ +R+ YK+GF +N+ + PKGL+E +R IS+KK EPDW+L++RL AYR+WL M
Sbjct: 57 ETIRQFLDRDYKWGFVSNVASESIPKGLDESTVRLISSKKKEPDWLLQFRLNAYRQWLKM 116
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++PSW+ YP IDF D YY APK QSLD+VDPELL T+ KLGIP+ EQ+ LA
Sbjct: 117 EEPSWSDNTYPKIDFQDFCYYTAPKQKEVKQSLDEVDPELLETFRKLGIPLTEQKRLA-- 174
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVS+ TT ++ L+ +GVIF ISEA+ P+LVKKYL +VVPV DN+Y
Sbjct: 175 ---NVAVDAVFDSVSIATTHRKTLEAAGVIFCSISEAVHRFPELVKKYLGSVVPVADNYY 231
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSF YIPK PME+STYFRIN TGQFERTLIIADE S+VSYLEGCT
Sbjct: 232 AALNSAVFSDGSFCYIPKNTVSPMEISTYFRINALETGQFERTLIIADEKSFVSYLEGCT 291
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D+NQLHAAVVEL + AEIKYSTVQNWY GD+QG+GGIYNFVTKRG C G +SKI
Sbjct: 292 APSYDKNQLHAAVVELYCAEGAEIKYSTVQNWYAGDAQGRGGIYNFVTKRGLCAGKKSKI 351
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++N QQ D+GTKM+H+ KN+ SRIVS
Sbjct: 352 SWTQVETGSAITWKYPSVILRGDDSVGEFYSVAVTNNRQQADTGTKMIHVGKNSRSRIVS 411
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N YRG V + A +SR+F+QCDS+LIGNNC A+T PY + KN S +EHE
Sbjct: 412 KGISAGESRNCYRGLVQIQPTADNSRSFSQCDSMLIGNNCVANTYPYTQDKNPSARVEHE 471
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKI ++ LFY QRGI E A+A I+ GF REV +LP+EFA E +L+ + LE SV
Sbjct: 472 ATTSKIGEDQLFYFQQRGIEPEKAVATIIGGFCREVFNELPLEFAAEVNQLMSLKLENSV 531
Query: 489 G 489
G
Sbjct: 532 G 532
>gi|307111836|gb|EFN60070.1| hypothetical protein CHLNCDRAFT_29265 [Chlorella variabilis]
Length = 480
Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats.
Identities = 312/482 (64%), Positives = 381/482 (79%), Gaps = 14/482 (2%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
YKYGF+T I+ ++ PKGL+ED++R ISAKK EP+WML++RL AYR+WLTM++P+W+
Sbjct: 4 KPYKYGFKTIIETEQFPKGLSEDVVRAISAKKEEPEWMLDFRLKAYRKWLTMEEPNWSDN 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
RYP ID+ DL YY+APK + SLD+VDPELL T++KLGIP+ EQ+ LA VAVD
Sbjct: 64 RYPRIDYQDLSYYSAPKVVDKKTSLDEVDPELLATFDKLGIPLNEQKRLA-----NVAVD 118
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
AVFDSVS+ TTFKEEL K+GVIF ISEA+ E+PDLV+KYL +VVPV DN++AALN+AVF
Sbjct: 119 AVFDSVSIATTFKEELGKAGVIFCSISEAVKEYPDLVRKYLGSVVPVADNYFAALNAAVF 178
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+DGSFVYIPKGVR PMELSTYFRIN TGQFERTLI+A+EG+YVSYLEGCTAP DENQ
Sbjct: 179 SDGSFVYIPKGVRSPMELSTYFRINASETGQFERTLIVAEEGAYVSYLEGCTAPAYDENQ 238
Query: 257 LHAAVVELVALDNAEIKYSTVQNW--YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
LHAAVVEL A +AEIKYSTVQNW Y GD++G+GGIYNFVTKRG C G RSKISWTQ+E
Sbjct: 239 LHAAVVELSAAKDAEIKYSTVQNWWGYAGDAEGRGGIYNFVTKRGICLGERSKISWTQVE 298
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
TGSAITWKYPS +L+G+ S GEFYS+A++N QQ D+GTKM+H+ K T SRIVSKGISAG
Sbjct: 299 TGSAITWKYPSVVLKGDHSVGEFYSVALTNNRQQADTGTKMIHVGKGTRSRIVSKGISAG 358
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI-------ESKNSSCNLEH 427
S N YRG V V AA +RN++QCDS+LIG+ GA+T PYI +EH
Sbjct: 359 HSVNAYRGLVQVQPTAAGARNYSQCDSMLIGDQAGANTYPYIQAGGGAAAGSGQGARVEH 418
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA+TSKI ++ LFY LQRGI E A+ +I++GF R+V +LP+EFA E L+ + LEGS
Sbjct: 419 EASTSKIGEDQLFYFLQRGIDAEDAVGMIISGFCRDVFNELPLEFAAEVNALMSLKLEGS 478
Query: 488 VG 489
VG
Sbjct: 479 VG 480
>gi|121595175|ref|YP_987071.1| cysteine desulfurase activator complex subunit SufB [Acidovorax sp.
JS42]
gi|120607255|gb|ABM42995.1| Iron-regulated ABC transporter membrane component SufB [Acidovorax
sp. JS42]
Length = 497
Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats.
Identities = 319/481 (66%), Positives = 385/481 (80%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ + Y++GF T+++ D P GL+ED IR IS KK EP ++L+WRL A+ RW M+
Sbjct: 22 ALEQALQRPYQHGFVTDVESDSLPPGLDEDTIRAISRKKREPQFLLDWRLAAFERWRAME 81
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P WA ++ IDF L YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG
Sbjct: 82 LPDWAHLKIEPIDFQALSYYSAPKSLKNAPKSLDEVDPKLLETYEKLNVPLHERARLAG- 140
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTF+E+L + GVIF S A+ HP+LV+KYL TVVP GDNFY
Sbjct: 141 ----VAVDAVFDSVSVGTTFREQLAEVGVIFCSFSHAVQNHPELVEKYLGTVVPQGDNFY 196
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGV+CPMELS+YFRIN + TGQFERTLIIA+EGS VSYLEGCT
Sbjct: 197 AALNSAVFSDGSFVYIPKGVKCPMELSSYFRINAQNTGQFERTLIIAEEGSSVSYLEGCT 256
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAAVVEL+A D+A IKYSTVQNWYPGD G GGIYNFVTKRG G RS+I
Sbjct: 257 APQRDENQLHAAVVELIAHDDAFIKYSTVQNWYPGDENGVGGIYNFVTKRGLAAGRRSRI 316
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
+WTQ+ETGSAITWKYPS +LRG++S GEF+SIA+SN FQQ D+GTKM+HL KNTTSRIVS
Sbjct: 317 AWTQIETGSAITWKYPSVVLRGDESNGEFHSIAVSNHFQQADTGTKMIHLGKNTTSRIVS 376
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG ++N+YRG V V+ GAA +RN TQCDSLLIG +CGAHT PY+++ S LEHE
Sbjct: 377 KGISAGHAHNSYRGLVRVNPGAAGARNHTQCDSLLIGPDCGAHTFPYVDTARSDAVLEHE 436
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATT++IS+E LFYC QRGI + A ALIV GF + VL++LPMEFA+EA+ L+ +SLEG+V
Sbjct: 437 ATTTRISEERLFYCQQRGIDPQEATALIVGGFCQAVLEELPMEFALEAKALLAVSLEGAV 496
Query: 489 G 489
G
Sbjct: 497 G 497
>gi|56708064|ref|YP_169960.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670535|ref|YP_667092.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis FSC198]
gi|224457152|ref|ZP_03665625.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254370551|ref|ZP_04986556.1| ABC superfamily ATP binding cassette transporter [Francisella
tularensis subsp. tularensis FSC033]
gi|254874867|ref|ZP_05247577.1| cysteine desulfurase activator complex subunit sufB [Francisella
tularensis subsp. tularensis MA00-2987]
gi|56604556|emb|CAG45604.1| ABC transporter, membrane protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320868|emb|CAL08987.1| ABC transporter, membrane protein [Francisella tularensis subsp.
tularensis FSC198]
gi|151568794|gb|EDN34448.1| ABC superfamily ATP binding cassette transporter [Francisella
tularensis subsp. tularensis FSC033]
gi|254840866|gb|EET19302.1| cysteine desulfurase activator complex subunit sufB [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282159260|gb|ADA78651.1| cysteine desulfurase activator complex subunit SufB [Francisella
tularensis subsp. tularensis NE061598]
Length = 481
Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats.
Identities = 334/482 (69%), Positives = 399/482 (82%), Gaps = 4/482 (0%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + KI Y++GF TNI+ + GLNED+IR ISA+KNE +++LEWRL AY +WL M
Sbjct: 3 ENLDKIIEQDYEHGFVTNIEAETIEAGLNEDVIRLISARKNELEFLLEWRLKAYHKWLEM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P WA + YP IDF + YY++PKS P+SLD+VDPE++ TY KLGI + EQE+LAG
Sbjct: 63 KSPKWADLNYPPIDFQAISYYSSPKSLKNHPKSLDEVDPEIIETYNKLGIHLHEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V +AVDAVFDSVSVVTTFKE+L ++GVIF PISEA+ ++P+LV+KYL +VVP GDNF
Sbjct: 123 V--RNIAVDAVFDSVSVVTTFKEKLAEAGVIFCPISEAVQKYPELVQKYLGSVVPQGDNF 180
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVF+DGSFVYIPKGV CPMELSTYFRIN TGQFERTLIIADEGSYVSYLEGC
Sbjct: 181 FAALNSAVFSDGSFVYIPKGVTCPMELSTYFRINAMNTGQFERTLIIADEGSYVSYLEGC 240
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD AEIKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 241 TAPMRDENQLHAAVVELVALDGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGVCH-KNAK 299
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 300 ISWTQVETGSAITWKYPSVVLRGDNSIGEFYSVALTRHAQQADTGTKMIHLGKNTKSTII 359
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG ++ YRG V + AA++RNF+QCDSLLIG+NC AHT PYIE+K++S +EH
Sbjct: 360 SKGISAGKASQAYRGLVRISPNAANARNFSQCDSLLIGHNCEAHTYPYIENKSNSSQIEH 419
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSKISD+ LFYC QRG+ EE AIA+IVNGF +EV +KLP+EFAVEAQKL+++SLEG+
Sbjct: 420 EATTSKISDDQLFYCKQRGLSEEDAIAMIVNGFCKEVFKKLPLEFAVEAQKLMEVSLEGA 479
Query: 488 VG 489
VG
Sbjct: 480 VG 481
>gi|33239538|ref|NP_874480.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237063|gb|AAP99132.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 480
Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats.
Identities = 297/481 (61%), Positives = 377/481 (78%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
V ++ Y+YGF T+++ +K PKG+NE IIR IS KK+EPD++LE+RL A+R+W M
Sbjct: 5 KTVSQVLEKSYEYGFLTDVESEKIPKGINESIIRLISEKKSEPDFLLEFRLKAFRKWEKM 64
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++P WA + YP I++ DL YY+APK I SLDDVDPE+L T++KLGIP+ EQ+ L
Sbjct: 65 EEPKWADLNYPPINYQDLVYYSAPKDIEKKTSLDDVDPEILATFDKLGIPLNEQKRL--- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
+ VAVDAVFDSVS+ TTFKE+L + GVIF ISEAI ++P+LV KYL T+VP+ DNF+
Sbjct: 122 --TNVAVDAVFDSVSIATTFKEKLAEDGVIFCSISEAIQKYPELVDKYLGTIVPMSDNFF 179
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSA+F+DGSFVYIPKGV CPMELS+YFRIN TGQFERTLIIA+E S VSYLEGCT
Sbjct: 180 AALNSAIFSDGSFVYIPKGVNCPMELSSYFRINSGDTGQFERTLIIAEEKSSVSYLEGCT 239
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D N LHAAVVEL+ALD+A IKYSTVQNWY GD G GGIYNFVTKRG C+G RSKI
Sbjct: 240 APMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDKNGIGGIYNFVTKRGRCKGKRSKI 299
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SW+Q+ETGS+ITWKYPSC+L G+ + GEFYS+A++N Q D+GTKM+H+ KNT S I+S
Sbjct: 300 SWSQVETGSSITWKYPSCILEGDGAVGEFYSVALTNNKQIADTGTKMIHIGKNTKSTIIS 359
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG V + A ++N++QCDSLLIG+ A+T PYI SK + ++EHE
Sbjct: 360 KGISAGKSKNSYRGLVHMGSKAFGAKNYSQCDSLLIGDQASANTYPYIHSKQMNSSIEHE 419
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKIS++ LFY RGI E A++++V+GF ++V KLPMEFA EA L+ + LEG++
Sbjct: 420 ASTSKISEDQLFYLKSRGINSEEAVSMMVSGFCQDVFNKLPMEFASEADSLLGLKLEGTI 479
Query: 489 G 489
G
Sbjct: 480 G 480
>gi|323343777|ref|ZP_08084004.1| FeS assembly protein SufB [Prevotella oralis ATCC 33269]
gi|323095596|gb|EFZ38170.1| FeS assembly protein SufB [Prevotella oralis ATCC 33269]
Length = 481
Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats.
Identities = 302/488 (61%), Positives = 378/488 (77%), Gaps = 7/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + V+++ +Y++GF TNI D PKGLNE++IR IS KK EP+W+L++RL A
Sbjct: 1 MEENNKNEFVKQVAERKYEFGFTTNIHTDIIPKGLNENVIRLISQKKEEPEWLLDFRLKA 60
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y W TM P+W + P IDF D+ YYA P + + +DPEL +T++KLGIP+ E
Sbjct: 61 YEYWKTMSIPTWGHLHLPEIDFQDISYYADPLAKKPKN--NKIDPELEKTFDKLGIPLEE 118
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L+G AVDA+ DSVSV TTFKE+L + G+IF I EA+ HP+LV++YL TVV
Sbjct: 119 RLALSGT-----AVDAIMDSVSVKTTFKEKLAEKGIIFCSIGEAVKNHPELVREYLGTVV 173
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DNF AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLIIAD+ SYV
Sbjct: 174 PYRDNFTAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIIADDDSYV 233
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ D AE+KYSTVQNWYPGD QGKGG+ N VTKR D
Sbjct: 234 SYLEGCTAPMRDENQLHAAIVEIIVKDRAEVKYSTVQNWYPGDEQGKGGVLNLVTKRSDL 293
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ KN
Sbjct: 294 RGESSKLSWTQVETGSAITWKYPSCVLRGDNSQAEFYSVAVTNNYQEADTGTKMIHMGKN 353
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N
Sbjct: 354 TKSTIISKGISAGHSQNSYRGLVRATPNADNARNYSSCDSLLLGSDCGAHTFPYMDIHND 413
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 414 TAIIEHEATTSKISEDQLFYCNQRGIPMEDAVGLIVNGYAKEVLNKLPMEFAVEAQKLLS 473
Query: 482 ISLEGSVG 489
+SLEG+VG
Sbjct: 474 VSLEGTVG 481
>gi|33860633|ref|NP_892194.1| cysteine desulfurase activator complex subunit SufB
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633575|emb|CAE18532.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 480
Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats.
Identities = 290/479 (60%), Positives = 373/479 (77%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + + YKYGF T+I+ +K KGLNED IR IS KK EP ++L +RL A+R+W M++
Sbjct: 7 VKDVVSEPYKYGFVTDIETEKISKGLNEDTIRLISEKKEEPKYLLNFRLNAFRKWQRMEE 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+WA + Y ID+ D+ YY+APK SLD+VDP+LL T++KLGIP+ EQ+ L
Sbjct: 67 PNWADLGYKKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKL----- 121
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+ VAVDAVFDSVS+ TTF++EL + GVIF ISEA+ +H +L++KYL +VVP DN++AA
Sbjct: 122 TNVAVDAVFDSVSIATTFRKELAEHGVIFCSISEAVKDHSNLIEKYLGSVVPANDNYFAA 181
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSFVYIPKGV+CPM+LS+YFRIN +GQFERTLIIA+E S VSYLEGCTAP
Sbjct: 182 LNSAVFSDGSFVYIPKGVKCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTAP 241
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D N LHAAVVEL+ALD+A IKYSTVQNWY G+ +G GGI+NFVTKRG C G RSKISW
Sbjct: 242 MFDTNTLHAAVVELIALDDASIKYSTVQNWYAGNEEGVGGIFNFVTKRGKCLGKRSKISW 301
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+Q+ETGSAITWKYPSC+L GE+S GEFYS+A++N QQ D+GTKM+H+ T S IVSKG
Sbjct: 302 SQVETGSAITWKYPSCILLGEESVGEFYSVALTNNLQQADTGTKMIHIGPRTKSTIVSKG 361
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V + A+ SRN++QCDS+LIG+ A+T PYI S+ + +EHEA+
Sbjct: 362 ISAGNSINSYRGLVKMGSKASGSRNYSQCDSMLIGDQAAANTFPYIHSQQPNSEIEHEAS 421
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T +IS++ LFY RGI E A++++V+GF R+V +LP+EFA EA KL+ + LEGSVG
Sbjct: 422 TCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPLEFAAEADKLLALKLEGSVG 480
>gi|88706199|ref|ZP_01103906.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
gi|88699593|gb|EAQ96705.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
Length = 479
Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats.
Identities = 334/482 (69%), Positives = 393/482 (81%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + +Y GF ++I+ D GL+ED+IRFISAKK EPDW+LEWRL A+R W M
Sbjct: 4 EVIDSRIEKEYSAGFVSDIESDTLAPGLDEDVIRFISAKKGEPDWLLEWRLEAFRGWQEM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+ P WA + YP ID+ L YY+APKS+ GPQSLD+VDPELL Y KLGIP+ EQE+LAG
Sbjct: 64 ETPEWAHVHYPQIDYQALSYYSAPKSMEDGPQSLDEVDPELLEIYNKLGIPLHEQEMLAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTF+ +L ++GVIF PISEA+ E+P+LVKKYL TVVP DNF
Sbjct: 124 -----VAVDAVFDSVSVATTFRSKLAEAGVIFCPISEAVHEYPELVKKYLGTVVPRRDNF 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE TGQFERTLIIADE S+VSYLEGC
Sbjct: 179 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEAKTGQFERTLIIADEASHVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGDS+GKGGIYNFVTKRG SK
Sbjct: 239 TAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDSEGKGGIYNFVTKRGVAH-RNSK 297
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+LRG+ S GEFYS+A++N QQ D+GTKM+HL KNT S I+
Sbjct: 298 ISWTQVETGSAVTWKYPSCILRGDNSVGEFYSVALTNNMQQADTGTKMIHLGKNTRSTII 357
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S+N YRG V + A +RN+TQCDSLLIG+ C AHT PYIES+N S +EH
Sbjct: 358 SKGISAGKSSNAYRGLVRMSPRAEGARNYTQCDSLLIGDRCAAHTFPYIESRNPSAVVEH 417
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ ++ C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEGS
Sbjct: 418 EATTSKVSDDQMYLCQQRGLDAEKAVSMIVNGFCKEVFRELPMEFAVEAGKLLEVSLEGS 477
Query: 488 VG 489
VG
Sbjct: 478 VG 479
>gi|299142248|ref|ZP_07035381.1| FeS assembly protein SufB [Prevotella oris C735]
gi|298576337|gb|EFI48210.1| FeS assembly protein SufB [Prevotella oris C735]
Length = 488
Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats.
Identities = 301/488 (61%), Positives = 383/488 (78%), Gaps = 7/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+A RE + V+++ +Y++GF T++Q D KGLN DI+R IS KK EPDW+LE+RL A
Sbjct: 8 MAEREKNEFVKQVAEKKYEFGFTTDVQTDIIEKGLNRDIVRLISKKKEEPDWLLEFRLKA 67
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y W +K P+W + P ID+ + YYA P + ++DPEL +T++KLGIP+ E
Sbjct: 68 YEYWKDLKQPAWGHVHLPEIDYQGISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLEE 125
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L+G AVDA+ DSVSV TTFKE+L++ G+IF I EA+ EH DLVK+YL +VV
Sbjct: 126 RLALSGT-----AVDAIMDSVSVKTTFKEKLREKGIIFCSIGEAVKEHSDLVKEYLGSVV 180
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN++AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +YV
Sbjct: 181 PYRDNYFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDNAYV 240
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG+ N VTKRGD
Sbjct: 241 SYLEGCTAPMRDENQLHAAIVEIIVKDNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRGDL 300
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ KN
Sbjct: 301 RGVNSKLSWTQVETGSAITWKYPSCILRGDNSTAEFYSVAVTNHYQEADTGTKMIHMGKN 360
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N
Sbjct: 361 TKSTIISKGISAGHSQNSYRGLVRATANADNARNYSSCDSLLLGSDCGAHTFPYMDIHND 420
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 421 SAVVEHEATTSKISEDQLFYCNQRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEAQKLLS 480
Query: 482 ISLEGSVG 489
+SLEG+VG
Sbjct: 481 VSLEGTVG 488
>gi|282881113|ref|ZP_06289800.1| FeS assembly protein SufB [Prevotella timonensis CRIS 5C-B1]
gi|281304917|gb|EFA96990.1| FeS assembly protein SufB [Prevotella timonensis CRIS 5C-B1]
Length = 483
Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats.
Identities = 301/490 (61%), Positives = 388/490 (79%), Gaps = 8/490 (1%)
Query: 1 MVAVRE-TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V + VR++ +Y++GF T++ + KGLNED+IR IS+KK EPDW+L++RL
Sbjct: 1 MEEVNNRNNEYVRQVAEQKYEFGFTTDVHTEIIEKGLNEDVIRLISSKKGEPDWLLDFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AYR WLTMK PSW + P ID+ + YYA P + ++DPEL +T++KLGIP+
Sbjct: 61 KAYRYWLTMKQPSWGHVTLPEIDYQGISYYADPMAKKPQN--KEIDPELEKTFDKLGIPL 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ IL+G AVDA+ DSVSV TTFKE+L++ G+IF + EA+ EHPDLVK+Y+ +
Sbjct: 119 EERLILSGT-----AVDAIMDSVSVKTTFKEKLREKGIIFCSMGEAVKEHPDLVKQYIGS 173
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNF+AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +
Sbjct: 174 VVPYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDA 233
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RDENQLHAA+VE++ ++NAE+KYSTVQNWYPGD G+GG+ N VTKRG
Sbjct: 234 YVSYLEGCTAPMRDENQLHAAIVEIIVMNNAEVKYSTVQNWYPGDKHGQGGVLNLVTKRG 293
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+CRG+ SK+SWTQ+ETGSAITWKYPSC+L+G+ S EFYS+A++N +Q+ D+GTKM+H+
Sbjct: 294 ECRGVNSKLSWTQVETGSAITWKYPSCILKGDGSQAEFYSVAVTNNYQEADTGTKMIHMG 353
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++
Sbjct: 354 KNTKSTIISKGISAGHSQNSYRGLVRATANADNARNYSSCDSLLLGSQCGAHTFPYMDIH 413
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL
Sbjct: 414 NDSAIVEHEATTSKISEDQLFYCNQRGIPTEQAVGLIVNGYAKQVLNKLPMEFAVEAQKL 473
Query: 480 IDISLEGSVG 489
+ +SLEG+VG
Sbjct: 474 LSVSLEGTVG 483
>gi|319763108|ref|YP_004127045.1| fes assembly protein sufb [Alicycliphilus denitrificans BC]
gi|330825171|ref|YP_004388474.1| FeS assembly protein SufB [Alicycliphilus denitrificans K601]
gi|317117669|gb|ADV00158.1| FeS assembly protein SufB [Alicycliphilus denitrificans BC]
gi|329310543|gb|AEB84958.1| FeS assembly protein SufB [Alicycliphilus denitrificans K601]
Length = 500
Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats.
Identities = 318/481 (66%), Positives = 385/481 (80%), Gaps = 6/481 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ + Y++GF T+I+ D P GL+ED+IR IS KK EP+++L WRL A+ RW M+
Sbjct: 25 ALEQALARPYQHGFVTDIESDSLPPGLDEDVIRAISRKKKEPEFLLNWRLAAFERWRAME 84
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P WA +R IDF L YY+APKS P+SLD+VDP+LL TYEKLG+P+ E+ LAG
Sbjct: 85 LPDWAHLRIEPIDFQALSYYSAPKSLKNAPKSLDEVDPKLLETYEKLGVPLHERARLAG- 143
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTF+++L GVIF S A+ HP+LV++YL +VVP GDNFY
Sbjct: 144 ----VAVDAVFDSVSVGTTFRKQLADVGVIFCSFSHAVQNHPELVERYLGSVVPQGDNFY 199
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVF+DGSFVYIPKGV+CPMELS+YFRIN + TGQFERTLIIA+EGS VSYLEGCT
Sbjct: 200 AALNSAVFSDGSFVYIPKGVKCPMELSSYFRINAQNTGQFERTLIIAEEGSSVSYLEGCT 259
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAAVVEL+A D+A IKYSTVQNWYPGD G GGIYNFVTKRG G RS+I
Sbjct: 260 APQRDENQLHAAVVELIAHDDAFIKYSTVQNWYPGDENGVGGIYNFVTKRGLAAGRRSRI 319
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
+WTQ+ETGSAITWKYPS +LRGE+S GEF+SIA+SN FQQ D+GTKM+HL KNTTSRIVS
Sbjct: 320 AWTQIETGSAITWKYPSVVLRGEESNGEFHSIAVSNHFQQADTGTKMIHLGKNTTSRIVS 379
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG + N+YRG V V+ GAA +RN TQCDSLLIG++CGAHT PY+++ +EHE
Sbjct: 380 KGISAGHAQNSYRGLVRVNAGAAGARNHTQCDSLLIGSDCGAHTFPYVDTARGDAVVEHE 439
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATT++IS+E LFYC QRGI + A ALIV GF + VL++LPMEFA+EA+ L+ +SLEG+V
Sbjct: 440 ATTTRISEERLFYCQQRGIDPQEATALIVGGFCQAVLEELPMEFALEAKALLAVSLEGAV 499
Query: 489 G 489
G
Sbjct: 500 G 500
>gi|325269681|ref|ZP_08136294.1| FeS assembly protein SufB [Prevotella multiformis DSM 16608]
gi|324988049|gb|EGC20019.1| FeS assembly protein SufB [Prevotella multiformis DSM 16608]
Length = 498
Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats.
Identities = 290/486 (59%), Positives = 378/486 (77%), Gaps = 7/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + V+K+ +Y++GF T++ + PKGLNE+I+R IS KK EP+W+L++RL A+
Sbjct: 20 ENKNNEFVKKVAEQKYEFGFTTDVHTEVIPKGLNEEIVRLISQKKGEPEWLLDFRLKAFH 79
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W T+ P+W + P + D+ YYA P + ++DPEL +T++KLGIP+ E+
Sbjct: 80 YWETLPVPTWGHLHLPELHLQDISYYADPLAKKPKN--KEMDPELAKTFDKLGIPLEERL 137
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G AVDA+ DSVSV TTFK++L + G+IF I EA+ EHPDLV++YL +VVP
Sbjct: 138 ALSGT-----AVDAIMDSVSVKTTFKKQLAEKGIIFCSIGEAVKEHPDLVRQYLGSVVPY 192
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN+ AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLI+AD+ +YVSY
Sbjct: 193 RDNYSAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAINTGQFERTLIVADDDAYVSY 252
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVE+V +NAE+KYSTVQNWYPGD GKGG+ N VTKRG+ RG
Sbjct: 253 LEGCTAPMRDENQLHAAVVEIVVNNNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGELRG 312
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L+G+ S EFYS+A++N +Q+ D+GTKM+H+ KNT
Sbjct: 313 VNSKLSWTQVETGSAITWKYPSCVLKGDNSQAEFYSVAVTNNYQEADTGTKMIHIGKNTK 372
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N +
Sbjct: 373 STIISKGISAGHSQNSYRGLVRATANAENARNYSSCDSLLLGSDCGAHTFPYMDIHNDTA 432
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+ ++
Sbjct: 433 IVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLLSVT 492
Query: 484 LEGSVG 489
LEG+VG
Sbjct: 493 LEGTVG 498
>gi|325856501|ref|ZP_08172190.1| FeS assembly protein SufB [Prevotella denticola CRIS 18C-A]
gi|325483470|gb|EGC86443.1| FeS assembly protein SufB [Prevotella denticola CRIS 18C-A]
Length = 507
Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats.
Identities = 290/486 (59%), Positives = 378/486 (77%), Gaps = 7/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + V+K+ +Y++GF T++ + PKGLNE+I+R IS KK EP+W+L++RL A+
Sbjct: 29 ENKNNEFVKKVAEQKYEFGFTTDVHTEVIPKGLNEEIVRLISQKKGEPEWLLDFRLKAFH 88
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W T+ P+W + P + D+ YYA P + ++DPEL +T++KLGIP+ E+
Sbjct: 89 YWETLPIPTWGHLHLPELHLQDISYYADPLAKKPKN--KEMDPELAKTFDKLGIPLEERL 146
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G AVDA+ DSVSV TTFK++L + G+IF I EA+ EHPDLV++YL +VVP
Sbjct: 147 ALSGT-----AVDAIMDSVSVKTTFKKQLAEKGIIFCSIGEAVKEHPDLVRQYLGSVVPY 201
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN+ AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLI+AD+ +YVSY
Sbjct: 202 RDNYSAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAINTGQFERTLIVADDDAYVSY 261
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVE+V +NAE+KYSTVQNWYPGD GKGG+ N VTKRG+ RG
Sbjct: 262 LEGCTAPMRDENQLHAAVVEIVVNNNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGELRG 321
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L+G+ S EFYS+A++N +Q+ D+GTKM+H+ KNT
Sbjct: 322 VNSKLSWTQVETGSAITWKYPSCVLKGDNSQAEFYSVAVTNNYQEADTGTKMIHIGKNTK 381
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N +
Sbjct: 382 STIISKGISAGHSQNSYRGLVRATANAENARNYSSCDSLLLGSDCGAHTFPYMDVHNDTA 441
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+ ++
Sbjct: 442 IVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLLSVT 501
Query: 484 LEGSVG 489
LEG+VG
Sbjct: 502 LEGTVG 507
>gi|163786781|ref|ZP_02181229.1| hypothetical protein FBALC1_16387 [Flavobacteriales bacterium
ALC-1]
gi|159878641|gb|EDP72697.1| hypothetical protein FBALC1_16387 [Flavobacteriales bacterium
ALC-1]
Length = 482
Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats.
Identities = 323/489 (66%), Positives = 395/489 (80%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E D ++ +Y+YGF T+I+ + P GLNEDI+R IS KK+EP+WM EWRL
Sbjct: 1 MSKYTE-DDLREELKTKEYEYGFYTDIESETFPVGLNEDIVRAISKKKDEPEWMTEWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++ W M +P WA + Y DF + YY+AP ++ ++LDDVDP+LL Y+KLGI +
Sbjct: 60 AFKVWKDMVEPEWANVNYEKPDFQSIAYYSAPVAVDPNKTLDDVDPDLLAMYKKLGISVD 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ + + +A+D V DSVSV TTFK+ L + G+IFMPISEAI EHP+LVKKY+ T+
Sbjct: 120 EQKKM-----NNIAMDIVVDSVSVATTFKKTLAEKGIIFMPISEAIQEHPELVKKYIGTI 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL+IADEGSY
Sbjct: 175 VPTKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNW+PG+++GKGG+YNFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWFPGNAEGKGGVYNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+HL K
Sbjct: 295 C-EKNAKISWTQVETGSAVTWKYPSCILKGDNSVGEFYSIAVTNNYQQADTGTKMIHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V ++ A ++RNF+QCDSLL+GN CGAHT PYIE+KN
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVQINSRADNARNFSQCDSLLMGNECGAHTFPYIEAKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI ++ +FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 414 KTAQIEHEATTSKIGEDQIFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|90994431|ref|YP_536921.1| putative ABC transporter [Porphyra yezoensis]
gi|122194716|sp|Q1XDP7|YCF24_PORYE RecName: Full=UPF0051 protein ycf24
gi|90818995|dbj|BAE92364.1| unnamed protein product [Porphyra yezoensis]
Length = 487
Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats.
Identities = 298/492 (60%), Positives = 387/492 (78%), Gaps = 8/492 (1%)
Query: 1 MVAVRETVDKVRKID---VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
MV + + + ++D YKYGF+T+++ ++ P+G++EDI+R IS KK+EP+++L +
Sbjct: 1 MVNTQNQISQTSELDYIVNQPYKYGFKTSVESEQFPRGISEDIVRLISKKKDEPEYLLNF 60
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL AY++W M PSWA I++P IDF+ + YYA PK +SLD+VDPE+L T+ KLGI
Sbjct: 61 RLKAYKKWKKMSSPSWAHIKHPNIDFNTIIYYAVPKLKKELKSLDEVDPEILDTFNKLGI 120
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ EQ+ ++ VAVDAVFDSVS+ TTFK+EL ++GVIF ISEAI ++P+L+KKYL
Sbjct: 121 SLNEQKRIS-----NVAVDAVFDSVSIATTFKKELSEAGVIFCSISEAIRDYPELIKKYL 175
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TVVP GDN++AALNSAVF+DGSF YIP CP+ELSTYFRIN + +GQFERTLIIAD
Sbjct: 176 GTVVPAGDNYFAALNSAVFSDGSFCYIPPNTVCPLELSTYFRINNEESGQFERTLIIADR 235
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS VSYLEGCTAPQ D NQLHAA+VELVAL+ AEIKYSTVQNWY G+ +GKGGIYNFVTK
Sbjct: 236 GSKVSYLEGCTAPQFDTNQLHAAIVELVALEGAEIKYSTVQNWYAGNKEGKGGIYNFVTK 295
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
RG C G SKISWTQ+ETGSAITWKYPSC+L GE S GEFYS+A++N +Q+ D+GTKM+H
Sbjct: 296 RGLCSGNNSKISWTQVETGSAITWKYPSCILAGENSQGEFYSVALTNNYQEADTGTKMIH 355
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ NT SRI+SKGISAG S N+YRG V V + +SRN++QCDSLLIG + A+T PYI+
Sbjct: 356 IGNNTKSRIISKGISAGRSKNSYRGLVKVGPQSFNSRNYSQCDSLLIGQSSQANTFPYIQ 415
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N + +EHEA+TSKIS++ +FY LQRGI E +IAL+++GF ++V +LPMEFA EA
Sbjct: 416 VQNPTSKVEHEASTSKISEDQIFYFLQRGINLEESIALMISGFCKDVFNELPMEFATEAD 475
Query: 478 KLIDISLEGSVG 489
+L+ + LEG+VG
Sbjct: 476 RLLSLKLEGTVG 487
>gi|288925324|ref|ZP_06419258.1| FeS assembly protein SufB [Prevotella buccae D17]
gi|315606719|ref|ZP_07881729.1| FeS assembly protein SufB [Prevotella buccae ATCC 33574]
gi|288337795|gb|EFC76147.1| FeS assembly protein SufB [Prevotella buccae D17]
gi|315251574|gb|EFU31553.1| FeS assembly protein SufB [Prevotella buccae ATCC 33574]
Length = 482
Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats.
Identities = 297/489 (60%), Positives = 379/489 (77%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M +E V+++ +Y +GF T++ + KGLNE+++R IS KK EP WML++RL
Sbjct: 1 MEENKEKNAFVKQVAEQKYAFGFTTDVDTEIIEKGLNEEVVRLISQKKGEPQWMLDFRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+ W T++ P WA + P ID+ + YYA P + ++DPEL +T++KLGIP+
Sbjct: 61 AFNHWKTLRQPDWAHLHIPEIDYQAISYYADPLAKKPAN--KEIDPELEKTFDKLGIPLE 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDA+ DSVSV TTFKE+L+ GVIF I EA+ EHP+LV++YL +V
Sbjct: 119 ERLALSGT-----AVDAIMDSVSVKTTFKEQLRAKGVIFCSIGEAVKEHPELVQEYLGSV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNF+A+LNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLIIAD+ +Y
Sbjct: 174 VPYRDNFFASLNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIIADDDAY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVE++ DNAE+KYSTVQNWYPGD GKGG+ N VTKRG+
Sbjct: 234 VSYLEGCTAPMRDENQLHAAVVEIIVKDNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGE 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 294 LRGVNSKLSWTQVETGSAITWKYPSCILRGDNSVAEFYSVAVTNNYQEADTGTKMIHMGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY+++ N
Sbjct: 354 NTKSTIISKGISAGHSQNSYRGLVRATPNAENARNYSSCDSLLLGSQCGAHTFPYMDAHN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 414 ETAVFEHEATTSKISEDQLFYCNQRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+SLEG+VG
Sbjct: 474 SVSLEGTVG 482
>gi|46445823|ref|YP_007188.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399464|emb|CAF22913.1| probable ABC transporter protein sufB [Candidatus Protochlamydia
amoebophila UWE25]
Length = 481
Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats.
Identities = 296/476 (62%), Positives = 379/476 (79%), Gaps = 6/476 (1%)
Query: 15 DVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ YKYGF T I+ + PKGLNE+ I ISAKKNEP ++LE+RL AY+RWL ++P WA
Sbjct: 11 ESSDYKYGFVTEIETESLPKGLNEETILAISAKKNEPAFLLEFRLKAYQRWLESEEPIWA 70
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+ YP ID+ D+ YY+APK L +VDPE+++T+E+LGIP+ EQ+ L+ VA
Sbjct: 71 NVNYPKIDYQDITYYSAPKKKPVLNDLSEVDPEIIKTFERLGIPLEEQKRLS-----NVA 125
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
VD VFDSVS+ TTFK++L+ +GV+ ISEA+ HP+L++KYL +VVP+GDN++A LNSA
Sbjct: 126 VDMVFDSVSIGTTFKKKLEDAGVVLCSISEAMHTHPELIQKYLGSVVPIGDNYFATLNSA 185
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
VF+DGSFVYIPKGV CPMELSTYFRIN+K +GQFERTLIIA+E SYVSYLEGCTAP
Sbjct: 186 VFSDGSFVYIPKGVHCPMELSTYFRINDKESGQFERTLIIAEENSYVSYLEGCTAPAFTN 245
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
NQLHAAVVEL+ALDNA+IKY+TVQNWY G+ G+GG++NFVTKRG C G+ SKISWTQ+
Sbjct: 246 NQLHAAVVELIALDNAQIKYATVQNWYSGNPKTGEGGVFNFVTKRGRCAGVNSKISWTQV 305
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
E G+AITWKYPSC+L+G+ S GEFYS+A++NG Q D+GTKM+HL KNT S IVSKGISA
Sbjct: 306 EVGAAITWKYPSCILQGDHSVGEFYSVALTNGQMQADTGTKMIHLGKNTKSTIVSKGISA 365
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S+N+YRG V V A ++RN+TQCDS+L+G+ C A+T PYIE N+S +EHEA+TSK
Sbjct: 366 DLSHNSYRGLVKVAPRATNARNYTQCDSMLVGDKCSANTFPYIEVGNASSQVEHEASTSK 425
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+++E LFY RGI +E A+ +IVNGF ++V+Q+LP+EFA EAQKL+ I LE SVG
Sbjct: 426 MNEEQLFYFQSRGISKENAVNMIVNGFCKDVIQELPLEFATEAQKLLAIKLENSVG 481
>gi|260772562|ref|ZP_05881478.1| iron-sulfur cluster assembly protein SufB [Vibrio metschnikovii CIP
69.14]
gi|260611701|gb|EEX36904.1| iron-sulfur cluster assembly protein SufB [Vibrio metschnikovii CIP
69.14]
Length = 478
Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats.
Identities = 325/482 (67%), Positives = 392/482 (81%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ + +Y+ GF ++I+ + GL+E +IR ISA KNEP+WMLEWRL AY WL M
Sbjct: 3 EQIHEALSRKYEAGFVSDIESETFATGLDESVIRRISAMKNEPEWMLEWRLKAYHNWLAM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P WA + YP +D+ + YY+APKS P+SLD+VDPELLR YEKLGIP+ EQE+LAG
Sbjct: 63 EEPEWAHVHYPKMDYQAISYYSAPKSMKDKPKSLDEVDPELLRVYEKLGIPLYEQEMLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V V VVTTF+E+LK++GVIF PISEA+ E+P+LVKKYL +VVP DN+
Sbjct: 123 VAVDVVFDSVS-----VVTTFREKLKEAGVIFCPISEAVQEYPELVKKYLGSVVPRSDNY 177
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLIIADEGSYVSYLEGC
Sbjct: 178 FAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIIADEGSYVSYLEGC 237
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAPQRDENQLHAAVVELVA+D+A+IKYSTVQNWYPGD GKGGIYNFVTKRG C +K
Sbjct: 238 TAPQRDENQLHAAVVELVAMDDAQIKYSTVQNWYPGDEDGKGGIYNFVTKRGICH-TNAK 296
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGS++TWKYPSC+L+G+ S GEFYS+A++ QQ D+GTKM+HL KNT S I+
Sbjct: 297 ISWTQVETGSSVTWKYPSCILKGDNSVGEFYSVALTRNRQQADTGTKMIHLGKNTRSTII 356
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG SNNTYRG V + A +RNFT+CDSLLIG+ CGAHT PYIES+N S +EH
Sbjct: 357 SKGISAGESNNTYRGLVHMGPKADGARNFTECDSLLIGDRCGAHTFPYIESRNPSAKVEH 416
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SDE LF C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL++ISLEGS
Sbjct: 417 EATTSKVSDEQLFLCQQRGLDTEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEISLEGS 476
Query: 488 VG 489
VG
Sbjct: 477 VG 478
>gi|146298944|ref|YP_001193535.1| cysteine desulfurase activator complex subunit SufB [Flavobacterium
johnsoniae UW101]
gi|146153362|gb|ABQ04216.1| FeS assembly protein SufB [Flavobacterium johnsoniae UW101]
Length = 482
Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats.
Identities = 329/489 (67%), Positives = 396/489 (80%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E K+ +++ +Y+YGF TNI+ + P GLNE+I+R IS KK EP+WM EWR+
Sbjct: 1 MSKYTEDDLKI-ELETKEYEYGFYTNIESETFPIGLNEEIVRAISLKKEEPEWMTEWRIE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W M +P WA ++Y DF + YY+APK + ++LDDVDPELL Y+KLGI +
Sbjct: 60 AFRAWKEMIEPEWANVQYEKPDFQAISYYSAPKQVDPNKTLDDVDPELLEMYKKLGISVD 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ + + VA+D V DSVSV TTFK+ L + G+IF PISEAI EHP+LVKKYL TV
Sbjct: 120 EQKKM-----NNVAMDIVVDSVSVATTFKKTLAEKGIIFCPISEAIKEHPELVKKYLGTV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGV+CPMELSTYFRIN+ GTGQFERTL+IADEGSY
Sbjct: 175 VPQKDNFYAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINQAGTGQFERTLVIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNW+PG+ +GKGG+YNFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWFPGNKEGKGGVYNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N FQQ D+GTKM+HL K
Sbjct: 295 C-ETNAKISWTQVETGSAVTWKYPSCVLKGDNSVGEFYSIAVTNNFQQADTGTKMIHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V + A ++RNF+QCDSLL+GNNCGAHT PYIESKN
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVQISPRAENARNFSQCDSLLMGNNCGAHTFPYIESKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ +EHEATTSKI ++ +FYC QRGIP E AIALIVNGF ++VL KLPMEFAVEAQKL+
Sbjct: 414 PTAKIEHEATTSKIGEDQVFYCNQRGIPTEKAIALIVNGFSKDVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|296272414|ref|YP_003655045.1| FeS assembly protein SufB [Arcobacter nitrofigilis DSM 7299]
gi|296096588|gb|ADG92538.1| FeS assembly protein SufB [Arcobacter nitrofigilis DSM 7299]
Length = 477
Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats.
Identities = 310/481 (64%), Positives = 387/481 (80%), Gaps = 7/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+K++ + + YK GFET I D P GLNE++I+ IS KKNEP W+ ++RL AY++WLTM
Sbjct: 4 NKIKNVIKNDYKLGFETIINSDTFPNGLNENVIKAISKKKNEPQWLCDFRLKAYKKWLTM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++P W+ ++ ID+ ++ YY+APK SLD+VDP +L+TYEKLGIP+ EQ++LAG
Sbjct: 64 EEPKWSSLQIDKIDYQNISYYSAPK--KELNSLDEVDPSILKTYEKLGIPLEEQKMLAG- 120
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVSV TTF +EL++ G+IF IS+A +HP+L++KYL++VVP+ DN++
Sbjct: 121 ----VAVDAVFDSVSVKTTFHKELEELGIIFCSISDAANKHPELLQKYLASVVPIADNYF 176
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A LNSAVFTDGSFVYIP RCPMELSTYFRIN TGQFERTLII D+ SYVSY EGC+
Sbjct: 177 ACLNSAVFTDGSFVYIPPKTRCPMELSTYFRINALNTGQFERTLIICDDDSYVSYNEGCS 236
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RD+ QLHAAVVELVAL N++IKYST+QNWYPGD GKGGI NFVTKRG C+G SKI
Sbjct: 237 APMRDKQQLHAAVVELVALKNSQIKYSTIQNWYPGDKDGKGGILNFVTKRGICKGDNSKI 296
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A+++ QQ D+GTKM+H+ KNT S I+S
Sbjct: 297 SWTQVETGSAITWKYPSCVLKGDNSVGEFYSVALTSLAQQADTGTKMMHIGKNTKSTIIS 356
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISA +N YRG V V + A +SRNF+QCDSLLIGN C AHT PY E +N+S +EHE
Sbjct: 357 KGISAMQGSNAYRGLVRVAKDAKNSRNFSQCDSLLIGNTCSAHTYPYQEVRNASSKIEHE 416
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKISDE LFY QRG+ EE A++LIVNGF +EVL +LPMEFAVEA++L++ISLEGSV
Sbjct: 417 ATTSKISDEQLFYIRQRGLSEENAVSLIVNGFCKEVLDELPMEFAVEARELLNISLEGSV 476
Query: 489 G 489
G
Sbjct: 477 G 477
>gi|327313031|ref|YP_004328468.1| FeS assembly protein SufB [Prevotella denticola F0289]
gi|326944917|gb|AEA20802.1| FeS assembly protein SufB [Prevotella denticola F0289]
Length = 507
Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats.
Identities = 290/486 (59%), Positives = 378/486 (77%), Gaps = 7/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + V+K+ +Y++GF T+I + PKGLNE+I+R IS KK EP+W+L++RL A+
Sbjct: 29 ENKNNEFVKKVAEQKYEFGFTTDIHTEVIPKGLNEEIVRLISQKKGEPEWLLDFRLKAFH 88
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W T+ P+W + P + D+ YYA P + ++DPEL +T++KLGIP+ E+
Sbjct: 89 YWETLPIPTWGHLHLPELHLQDISYYADPLAKKPKN--KEMDPELAKTFDKLGIPLEERL 146
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G AVDA+ DSVSV TTFK++L + G+IF I EA+ EHP+LV++YL +VVP
Sbjct: 147 ALSGT-----AVDAIMDSVSVKTTFKKQLAEKGIIFCSIGEAVKEHPNLVRQYLGSVVPY 201
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN+ AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN TGQFERTLI+AD+ +YVSY
Sbjct: 202 RDNYSAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINAINTGQFERTLIVADDDAYVSY 261
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAP RDENQLHAAVVE+V +NAE+KYSTVQNWYPGD GKGG+ N VTKRG+ RG
Sbjct: 262 LEGCTAPMRDENQLHAAVVEIVVNNNAEVKYSTVQNWYPGDENGKGGVLNLVTKRGELRG 321
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ SK+SWTQ+ETGSAITWKYPSC+L+G+ S EFYS+A++N +Q+ D+GTKM+H+ KNT
Sbjct: 322 VNSKLSWTQVETGSAITWKYPSCVLKGDNSQAEFYSVAVTNNYQEADTGTKMIHIGKNTK 381
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N +
Sbjct: 382 STIISKGISAGHSQNSYRGLVRATANAENARNYSSCDSLLLGSDCGAHTFPYMDVHNDTA 441
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ ++VL KLPMEFAVEAQKL+ ++
Sbjct: 442 IVEHEATTSKISEDQLFYCNQRGIPTEDAVGLIVNGYAKDVLNKLPMEFAVEAQKLLSVT 501
Query: 484 LEGSVG 489
LEG+VG
Sbjct: 502 LEGTVG 507
>gi|212550991|ref|YP_002309308.1| Fe-S cluster assembly protein SufB [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549229|dbj|BAG83897.1| Fe-S cluster assembly protein SufB [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 485
Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats.
Identities = 303/490 (61%), Positives = 387/490 (78%), Gaps = 6/490 (1%)
Query: 1 MVAVRETVDK-VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M D ++ Y+YGF +N+ + P GL++D+I ISAKKNEP W+L++RL
Sbjct: 1 MPDKENPNDTMLQTFADKDYEYGFTSNVSTELIPYGLSKDVICLISAKKNEPKWLLDFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+Y WL + P+W ++ P ID+ ++ YYAAPK Q D++DPEL++T+ KLG+P+
Sbjct: 61 KSYYYWLRQQMPTWTHLKIPPIDYQNIIYYAAPKPKGKLQYPDEIDPELIKTFNKLGVPL 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+EQ+I +G AVDAV DS+S+ TTFKE+L + G+IF SEA+ E+ DLVKKYL +
Sbjct: 121 QEQKIFSGT-----AVDAVMDSISIKTTFKEKLAEKGIIFCSFSEAVQEYSDLVKKYLGS 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNF++ALNSAVF+DGSFV+IPKG+RCPMELSTYFRIN TGQFERTLIIA+EGS
Sbjct: 176 VVPYRDNFFSALNSAVFSDGSFVFIPKGIRCPMELSTYFRINAMNTGQFERTLIIAEEGS 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAP RD+NQLHAA+VE++ALD+AE+KYSTVQNWYPGD GKGGIYNFVTKRG
Sbjct: 236 YVSYLEGCTAPMRDKNQLHAAIVEIIALDHAEVKYSTVQNWYPGDKNGKGGIYNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+G SKISWTQ+ETGS+ITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+HL
Sbjct: 296 ICKGAFSKISWTQVETGSSITWKYPSCILAGDNSIGEFYSVAVTNNYQQADTGTKMIHLG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRIVSKGIS G S N+YRG + + + A ++RN +QCDSLL+ + CGAHT PY++ K
Sbjct: 356 KNTRSRIVSKGISTGKSQNSYRGLIHISKEAKNARNHSQCDSLLLSDTCGAHTFPYMDIK 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S +EHEATTSKIS++ LFYC QRGI +E AI LI+NG+V E+L KLPMEFA+EA KL
Sbjct: 416 NNSAVVEHEATTSKISEDQLFYCNQRGISKENAINLIINGYVEEILNKLPMEFAMEAHKL 475
Query: 480 IDISLEGSVG 489
+ I+LEG+VG
Sbjct: 476 LQITLEGNVG 485
>gi|281424959|ref|ZP_06255872.1| FeS assembly protein SufB [Prevotella oris F0302]
gi|281400803|gb|EFB31634.1| FeS assembly protein SufB [Prevotella oris F0302]
Length = 488
Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats.
Identities = 301/488 (61%), Positives = 383/488 (78%), Gaps = 7/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+A RE + V+++ +Y++GF T++Q D KGLNEDI+ IS KK EPDW+LE+RL A
Sbjct: 8 MAEREKNEFVKQVAEKKYEFGFTTDVQTDIIEKGLNEDIVCLISKKKEEPDWLLEFRLKA 67
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y W +K P+W + P ID+ + YYA P + ++DPEL +T++KLGIP+ E
Sbjct: 68 YEYWKDLKQPAWGHVHLPEIDYQGISYYADPLAKKPKN--KEIDPELEKTFDKLGIPLEE 125
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L+G AVDA+ DSVSV TTFKE+L++ G+IF I EA+ EH DLVK+YL +VV
Sbjct: 126 RLALSGT-----AVDAIMDSVSVKTTFKEKLREKGIIFCSIGEAVKEHSDLVKEYLGSVV 180
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN++AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +YV
Sbjct: 181 PYRDNYFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDNAYV 240
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG+ N VTKRGD
Sbjct: 241 SYLEGCTAPMRDENQLHAAIVEIIVKDNAEVKYSTVQNWYPGDEHGKGGVLNLVTKRGDL 300
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ KN
Sbjct: 301 RGVNSKLSWTQVETGSAITWKYPSCILRGDNSTAEFYSVAVTNHYQEADTGTKMIHMGKN 360
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N
Sbjct: 361 TKSTIISKGISAGHSQNSYRGLVRATANADNARNYSSCDSLLLGSDCGAHTFPYMDIHND 420
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 421 SAVVEHEATTSKISEDQLFYCNQRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEAQKLLS 480
Query: 482 ISLEGSVG 489
+SLEG+VG
Sbjct: 481 VSLEGTVG 488
>gi|213963444|ref|ZP_03391699.1| FeS assembly protein SufB [Capnocytophaga sputigena Capno]
gi|213953964|gb|EEB65291.1| FeS assembly protein SufB [Capnocytophaga sputigena Capno]
Length = 489
Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats.
Identities = 318/476 (66%), Positives = 382/476 (80%), Gaps = 3/476 (0%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP-SWA 74
+YKYGF T+I+ + PKGLNE+++ +S KKNEP WM +WRL A+R W M+ P WA
Sbjct: 15 NSEYKYGFYTDIESETFPKGLNEEVVIALSKKKNEPQWMTDWRLDAFRAWQAMEVPPHWA 74
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK-V 133
+++ DF D+ YY+APK SLD+VDP+LL T++KLGI + EQ+ L GV+ V
Sbjct: 75 NLKFETPDFQDIAYYSAPKQKPKLNSLDEVDPQLLETFQKLGISLEEQKRLTGVEDKPAV 134
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
AVD V DSVSV TTF++ L + G+IF ISEAI +HP+LV+KYL TVVP DNFYAALNS
Sbjct: 135 AVDVVMDSVSVATTFQKTLAERGIIFCSISEAIQKHPELVRKYLGTVVPKTDNFYAALNS 194
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSF Y+PKGVRCPMELSTYFRIN+ GTGQFERTL+I DEG+YVSYLEGCTAPQRD
Sbjct: 195 AVFSDGSFCYVPKGVRCPMELSTYFRINQAGTGQFERTLLIVDEGAYVSYLEGCTAPQRD 254
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
ENQLHAAVVEL+A+DN EIKYSTVQNW+PGD GKGG+YNFVTKR +KISWTQ+
Sbjct: 255 ENQLHAAVVELIAMDNGEIKYSTVQNWFPGDKDGKGGVYNFVTKRALA-EKNAKISWTQV 313
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
ETGSAITWKYPS +L+G+ S GEFYSIA++N FQQ D+GTKM+HL NT S I+SKGISA
Sbjct: 314 ETGSAITWKYPSVVLKGDNSIGEFYSIAVTNHFQQADTGTKMIHLGNNTKSTIISKGISA 373
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G S N+YRG V V A ++RNF+QCDSLL+GN CGAHT PYIE+KN + +EHEATTSK
Sbjct: 374 GKSQNSYRGLVKVVPNAKNARNFSQCDSLLMGNLCGAHTFPYIEAKNPTAQIEHEATTSK 433
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
I ++ +FYC QRGI E AI+LIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 434 IGEDQIFYCNQRGIDTEKAISLIVNGFGKEVLNKLPMEFAVEAQKLLEISLEGSVG 489
>gi|71842236|ref|YP_277324.1| putative ABC transporter [Emiliania huxleyi]
gi|60101479|gb|AAX13823.1| ABC transporter [Emiliania huxleyi]
Length = 485
Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats.
Identities = 279/486 (57%), Positives = 369/486 (75%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++ + +I V YKYGF+T I+ + PKGLN++I+ IS KK+EP +M ++R A+
Sbjct: 5 TNDSEKVLEEIVVTPYKYGFKTEIENENFPKGLNQEIVDQISRKKDEPLFMSQFRAQAFS 64
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+W M P WA + P ID+ ++ YY+ PK+ SLD+VDPELL+T++KLG+ + EQ+
Sbjct: 65 QWQKMPSPDWAYLGIPPIDYQNIQYYSVPKTKKKLGSLDEVDPELLKTFDKLGVSLNEQK 124
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L + VAVDAVFDSVS+ +TFK EL+++GVIF +EA+ +P+L+KKYL +VVP+
Sbjct: 125 RL-----TNVAVDAVFDSVSIGSTFKVELQRAGVIFCSFAEAVERYPELIKKYLGSVVPI 179
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDNF+AALNSAVF+DGSF Y+PK V+CPMELSTYFRIN + GQFERTLI+ ++ V Y
Sbjct: 180 GDNFFAALNSAVFSDGSFCYVPKDVKCPMELSTYFRINNEEAGQFERTLIVVEDRGEVGY 239
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQ NQLHAAVVEL+A + A IKYSTVQNWY GD G GG+YNFVTKRG C G
Sbjct: 240 LEGCTAPQFSTNQLHAAVVELIAFEEAVIKYSTVQNWYAGDENGIGGVYNFVTKRGLCSG 299
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+++I+WTQ+ETGSAITWKYPSC+L G+ S GEFYS+A++ Q+ D+GTKM+HL N+
Sbjct: 300 RKARIAWTQVETGSAITWKYPSCILAGDSSIGEFYSVALTTNKQEADTGTKMIHLGSNSK 359
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRI+SKGIS G S N+YRG V V A +++N++QCDSLLIG + A+T PY+E +NS
Sbjct: 360 SRIISKGISTGNSKNSYRGLVKVSPRAINTQNYSQCDSLLIGKDSSANTFPYLEIQNSET 419
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEA+TSKI++E LFY LQRGI E A+AL+VNGF +EV +LP EFA EA +L+++
Sbjct: 420 KIEHEASTSKIAEEQLFYLLQRGISMEEAVALMVNGFCKEVFNELPFEFASEADRLLNLK 479
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 480 LEGSVG 485
>gi|305665684|ref|YP_003861971.1| hypothetical protein FB2170_05285 [Maribacter sp. HTCC2170]
gi|88710442|gb|EAR02674.1| hypothetical protein FB2170_05285 [Maribacter sp. HTCC2170]
Length = 481
Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats.
Identities = 324/471 (68%), Positives = 382/471 (81%), Gaps = 6/471 (1%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
Y+YGF T+I+ D PKGLNE+I+R IS KKNEP+WM +WRL A+R W M++P WA + Y
Sbjct: 17 YEYGFYTDIESDTFPKGLNENIVRAISKKKNEPEWMTDWRLEAFRIWEEMEEPEWANVHY 76
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
DF + YY+AP + ++LDDVDP+LL Y KLGI + EQ+ L V V
Sbjct: 77 EKPDFQAISYYSAPIAADPNKTLDDVDPDLLEMYRKLGISVDEQKKLQNVAVDIVVDSVS 136
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
V TTFK+ L + G+IFMPISEAI EHP+LVKKY+ TVVP DNFYAALNSAVFTD
Sbjct: 137 -----VATTFKKTLAEKGIIFMPISEAIQEHPELVKKYIGTVVPKTDNFYAALNSAVFTD 191
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSF YIPKGV+CPMELSTYFRINE GTGQFERTL+IAD+GSYVSYLEGCTAP RDENQLH
Sbjct: 192 GSFCYIPKGVKCPMELSTYFRINEGGTGQFERTLVIADKGSYVSYLEGCTAPSRDENQLH 251
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVEL+ALD+AEIKYSTVQNWYPG+S+GKGG+YNFVTKRG C SKISWTQ+ETGSA
Sbjct: 252 AAVVELIALDDAEIKYSTVQNWYPGNSEGKGGVYNFVTKRGIC-EKNSKISWTQVETGSA 310
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+TWKYPSC+L+G+ S GEFYSIA++N FQQ D+GTKM+H+ KNT S I+SKGISAG S N
Sbjct: 311 VTWKYPSCILKGDNSIGEFYSIAVTNNFQQADTGTKMVHIGKNTRSTIISKGISAGKSQN 370
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+YRG V V+R A ++RNF+QCDSLL+GN CGAHT PYIE+KN + +EHEATTSKI ++
Sbjct: 371 SYRGLVQVNRRAKNARNFSQCDSLLMGNECGAHTFPYIEAKNKTAQIEHEATTSKIGEDQ 430
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 431 IFYCNQRGIETEKAIALIVNGFSKEVLNKLPMEFAVEAQKLLEISLEGSVG 481
>gi|150026423|ref|YP_001297249.1| cysteine desulfurase activator complex subunit SufB [Flavobacterium
psychrophilum JIP02/86]
gi|149772964|emb|CAL44448.1| Fe-S assembly protein, SufB [Flavobacterium psychrophilum JIP02/86]
Length = 482
Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats.
Identities = 329/489 (67%), Positives = 397/489 (81%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E K+ +++ +Y+YGF T+I+ + P GLNEDI+R IS KK EP WM +WR+
Sbjct: 1 MSKYTEDDLKI-ELETKEYEYGFYTDIESETFPIGLNEDIVRAISLKKEEPQWMTDWRIE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W M +P WA + Y DF + YY+APK++ ++LDDVDP+LL Y+KLGI I
Sbjct: 60 AFRAWQDMVEPEWANVHYAKPDFQAISYYSAPKAVDPNKTLDDVDPDLLEMYKKLGISID 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+++ + VA+D V DSVSV TTFK+ L + G+IF PISEAI E P+LV+KYL TV
Sbjct: 120 EQKMM-----NNVAMDIVVDSVSVATTFKKTLSEKGIIFCPISEAIREFPELVQKYLGTV 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL+IADEGSY
Sbjct: 175 VPQKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLLIADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+ALD+AEIKYSTVQNW+PG+ +GKGG+YNFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIALDDAEIKYSTVQNWFPGNKEGKGGVYNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYSIA++N FQQ D+GTKM+H+ K
Sbjct: 295 C-EKNAKISWTQVETGSAVTWKYPSCILKGDNSIGEFYSIAVTNNFQQADTGTKMIHIGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V + GA ++RNF+QCDSLL+GNNCGAHT PYIESKN
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVRISAGADNARNFSQCDSLLMGNNCGAHTFPYIESKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+S +EHEATTSKI ++ +FYC QRGIP E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 414 TSAKIEHEATTSKIGEDQVFYCNQRGIPTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|149071991|ref|YP_001293541.1| iron-sulfur cluster formation ABC transporter [Rhodomonas salina]
gi|134302942|gb|ABO70746.1| iron-sulfur cluster formation ABC transporter [Rhodomonas salina]
Length = 492
Score = 525 bits (1351), Expect = e-147, Method: Composition-based stats.
Identities = 301/488 (61%), Positives = 387/488 (79%), Gaps = 6/488 (1%)
Query: 3 AVRETVD-KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+E D V+K+ YKYGF TN++ ++ P+GLNED+I+ IS KK EP +ML++RL A
Sbjct: 10 KEQEQSDFNVKKLISQPYKYGFTTNVENEEFPRGLNEDVIKLISEKKKEPGFMLDFRLRA 69
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y +W M P WA +++ +ID+ D+ YY+APKS SL++VD ++L T+EKLGIP+ E
Sbjct: 70 YSQWCKMVAPEWACVQHTSIDYQDIIYYSAPKSKKKLDSLEEVDSDILDTFEKLGIPLTE 129
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q+ LA VAVDA+FDSVS+ TTF+EEL K GVIF PISEA+ ++P+LVKKYL +VV
Sbjct: 130 QKRLA-----NVAVDAIFDSVSIGTTFREELSKVGVIFCPISEALAKYPELVKKYLGSVV 184
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P+GDN++AALNSAVF++GSF Y+PK CP+ELSTYFRIN + +GQFERTLIIAD S V
Sbjct: 185 PIGDNYFAALNSAVFSEGSFCYVPKDTICPLELSTYFRINNEESGQFERTLIIADINSKV 244
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAPQ D+NQLHAAVVEL+ALDNAEIKYSTVQNWY GDS G GGIYNFVTKRG C
Sbjct: 245 SYLEGCTAPQFDKNQLHAAVVELIALDNAEIKYSTVQNWYSGDSNGLGGIYNFVTKRGLC 304
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G +KISWTQ+ETGS+ITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+ +N
Sbjct: 305 AGKNAKISWTQVETGSSITWKYPSCVLVGDNSTGEFYSVALTNNYQQADTGTKMIHVGQN 364
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S+I+SKGI AG S NTYRG+V + A HS N++QCDS+LIG+ A+T PYI+ NS
Sbjct: 365 TKSKIISKGICAGNSRNTYRGQVKISGKAKHSINYSQCDSMLIGDKSQANTFPYIQVSNS 424
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEA+TSKI +E LFY LQRGI E+AI+L+++GF ++V +LPMEFA+EA +L+
Sbjct: 425 NSRVEHEASTSKIEEEQLFYFLQRGIDLESAISLLISGFCKDVFSELPMEFALEADRLLS 484
Query: 482 ISLEGSVG 489
+ LEGSVG
Sbjct: 485 LKLEGSVG 492
>gi|294675010|ref|YP_003575626.1| FeS assembly protein SufB [Prevotella ruminicola 23]
gi|294471698|gb|ADE81087.1| FeS assembly protein SufB [Prevotella ruminicola 23]
Length = 482
Score = 525 bits (1351), Expect = e-147, Method: Composition-based stats.
Identities = 303/489 (61%), Positives = 383/489 (78%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + + VR++ +Y++GF T++ + KGLNEDI+R ISAKK EP+WMLE+RL
Sbjct: 1 MSDNKN--EFVRQVAEQKYEFGFTTDVHTEIIEKGLNEDIVRLISAKKGEPEWMLEFRLK 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+R W ++P W + P ID+ + YYA P + P+ +DPEL +T++KLGIP+
Sbjct: 59 AFRYWKEQQEPKWGHVHVPEIDYQAISYYADPLAK-KPEGDGKIDPELEKTFDKLGIPLE 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ L+G AVDA+ DSVSV TTFKE+L++ GVIF I EAI EH DLV++YL TV
Sbjct: 118 ERLALSG----NTAVDAIMDSVSVKTTFKEKLREKGVIFCSIGEAIKEHGDLVRQYLGTV 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNF+AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLIIAD+ +Y
Sbjct: 174 VPYKDNFFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIIADDDAY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAA+VE++ ++ AE+KYSTVQNWYPGD GKGG+ N VTKRGD
Sbjct: 234 VSYLEGCTAPMRDENQLHAAIVEIIVMNRAEVKYSTVQNWYPGDENGKGGVLNLVTKRGD 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ K
Sbjct: 294 LRGVDSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNYQEADTGTKMIHIGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G++CGAHT PY++ N
Sbjct: 354 NTKSTIISKGISAGHSQNSYRGLVRAASTADNARNYSSCDSLLLGSDCGAHTFPYMDVHN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ EHEATTSKIS++ LFYC QRGIP E A+ LIVNG+ +EVLQKLPMEFAVEAQKL+
Sbjct: 414 DTAVFEHEATTSKISEDQLFYCNQRGIPTEQAVGLIVNGYAKEVLQKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+SLEG+VG
Sbjct: 474 SVSLEGTVG 482
>gi|224078630|ref|XP_002305582.1| predicted protein [Populus trichocarpa]
gi|222848546|gb|EEE86093.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats.
Identities = 286/491 (58%), Positives = 367/491 (74%), Gaps = 8/491 (1%)
Query: 2 VAVRETVDKVRKIDVDQ-Y--KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
+ + DK+R+I ++ Y K+GF +I PKGL+++ IR IS+ K EPDWML++R
Sbjct: 69 TSSTSSDDKIREILRNRDYNEKFGFNMDIDSFTIPKGLSKETIRLISSLKEEPDWMLDFR 128
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A+ R+L +K+P W+ YP IDF D+ YY+APK SL++ DPEL++ +++LGIP
Sbjct: 129 LNAFERFLKLKEPKWSDNEYPIIDFQDMCYYSAPKKKPTVNSLEEADPELIKYFDRLGIP 188
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ E+ LA VAVDAV DSVS+ TT ++ L+K+GVIF ISEAI ++PDLV+KYL
Sbjct: 189 LTERNRLA-----NVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIQKYPDLVRKYLG 243
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
VVP DN+YAALNSAVF+DGSF Y+PK +CPM++STYFRIN TGQFERTLI+AD+
Sbjct: 244 RVVPSEDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINAMETGQFERTLIVADDR 303
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S+V YLEGCTAP D+NQLHAAVVEL + AEIKYSTVQNWY GD QGKGGIYNFVTKR
Sbjct: 304 SFVEYLEGCTAPSYDKNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEQGKGGIYNFVTKR 363
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G C G RSKISWTQ+ETGSAITWKYPS +L G+ + GEFYS+A++N +QQ D+GTKM+H
Sbjct: 364 GLCAGDRSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHK 423
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT SRI+SKGIS G S N YRG V V A ++RN +QCDS+LIG+ A+T PYI+
Sbjct: 424 GKNTRSRIISKGISVGHSRNCYRGLVQVQSKADNARNSSQCDSMLIGDTAAANTYPYIQV 483
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
KN + +EHEA+TSKI ++ LFY QRGI E A+A +++GF R+V +LP EF E +
Sbjct: 484 KNPTARVEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGSEVNQ 543
Query: 479 LIDISLEGSVG 489
L+ + LEGSVG
Sbjct: 544 LMSLKLEGSVG 554
>gi|254515563|ref|ZP_05127623.1| FeS assembly protein SufB [gamma proteobacterium NOR5-3]
gi|219675285|gb|EED31651.1| FeS assembly protein SufB [gamma proteobacterium NOR5-3]
Length = 479
Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats.
Identities = 333/482 (69%), Positives = 394/482 (81%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + +Y GF ++I+ + GL+ED+IRFISAKKNEP W+LEWRL AYR WL M
Sbjct: 4 EVIDSRIDKEYSAGFVSDIESNTLAAGLDEDVIRFISAKKNEPQWLLEWRLEAYRDWLEM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+ P WA + YP IDF L YY+APKS+ GPQSLD+VDPELL Y KLGIP+ EQE+LAG
Sbjct: 64 ETPEWAHVHYPQIDFKALSYYSAPKSMEDGPQSLDEVDPELLEIYNKLGIPLHEQEMLAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTF+ +L ++GVIF PISEA+ EHP+LV+KYL +VVP DNF
Sbjct: 124 -----VAVDAVFDSVSVATTFRSKLAEAGVIFCPISEAVHEHPELVRKYLGSVVPRRDNF 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAVF+DGSFVYIPKGVRCPMELSTYFRINE TGQFERTLIIADE S+VSYLEGC
Sbjct: 179 YAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEAKTGQFERTLIIADEASHVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD++GKGGIYNFVTKRG SK
Sbjct: 239 TAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGVAH-TNSK 297
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSA+TWKYPSC+LRG+ S GEFYS+A++N QQ D+GTKM+HL KNT S I+
Sbjct: 298 ISWTQVETGSAVTWKYPSCILRGDNSVGEFYSVALTNNMQQADTGTKMIHLGKNTRSTII 357
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S+N YRG V + A +RN+TQCDSLLIG+ C AHT PYIES+N S +EH
Sbjct: 358 SKGISAGKSSNAYRGLVRMSPRAEGARNYTQCDSLLIGDRCAAHTFPYIESRNPSAVIEH 417
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ ++ C QRG+ E A+++IVNGF +EV ++LPMEFAVEA KL+++SLEGS
Sbjct: 418 EATTSKVSDDQMYLCQQRGLDAEKAVSMIVNGFCKEVFRELPMEFAVEAGKLLEVSLEGS 477
Query: 488 VG 489
VG
Sbjct: 478 VG 479
>gi|319953153|ref|YP_004164420.1| iron-regulated abc transporter membrane component sufb
[Cellulophaga algicola DSM 14237]
gi|319421813|gb|ADV48922.1| Iron-regulated ABC transporter membrane component SufB
[Cellulophaga algicola DSM 14237]
Length = 481
Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats.
Identities = 321/471 (68%), Positives = 376/471 (79%), Gaps = 6/471 (1%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
Y+YGF T+I+ D P GL+EDI+R IS KKNEP WM +WR+ AYR W M++P WA + Y
Sbjct: 17 YEYGFYTDIESDTFPIGLSEDIVRAISKKKNEPQWMTDWRIEAYRVWEKMEEPEWANVHY 76
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
DF + YY+APK +SLDDVDPELL Y+KLGI + EQ+ L V V
Sbjct: 77 TKPDFQAISYYSAPKKADPNKSLDDVDPELLEMYKKLGISVDEQKKLQNVAVDIVVDSVS 136
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
V TTFK+ L + G+IFMPISEAI EHP+LVKKY+ ++VP DNFYAALNSAVFTD
Sbjct: 137 -----VATTFKKTLGEKGIIFMPISEAIIEHPELVKKYMGSIVPTTDNFYAALNSAVFTD 191
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL+IADE SYVSYLEGCTAP RDENQLH
Sbjct: 192 GSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVIADESSYVSYLEGCTAPSRDENQLH 251
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVEL+ALDNAEIKYSTVQNW+PG+ +GKGG+YNFVTKR C +K+SWTQ+ETGSA
Sbjct: 252 AAVVELIALDNAEIKYSTVQNWFPGNKEGKGGVYNFVTKRALC-EKNAKVSWTQVETGSA 310
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+HL KNT S I+SKGISAG S N
Sbjct: 311 VTWKYPSCILKGDNSIGEFYSIAVTNNYQQADTGTKMIHLGKNTRSTIISKGISAGKSQN 370
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+YRG V V A ++RNF+QCDSLL+GN CGAHT PYIE KN + +EHEATTSKI ++
Sbjct: 371 SYRGLVQVSSRADNARNFSQCDSLLMGNECGAHTFPYIEVKNKTAQIEHEATTSKIGEDQ 430
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFYC QRGIP E AIALIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 431 LFYCNQRGIPTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLLEISLEGSVG 481
>gi|296269945|ref|YP_003652577.1| FeS assembly protein SufB [Thermobispora bispora DSM 43833]
gi|296092732|gb|ADG88684.1| FeS assembly protein SufB [Thermobispora bispora DSM 43833]
Length = 470
Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats.
Identities = 204/475 (42%), Positives = 294/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y++G+ +T++ AP+GL+E+++R ISA KNEP+WMLE RL R + P+W
Sbjct: 12 LGTYRFGWADTDLAGATAPRGLSEEVVRNISAIKNEPEWMLELRLKGLRLFERKPLPTWG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ YY P D++ PE+ RTY+KLGIP E++ L
Sbjct: 72 -ADLSDIDFDNIKYYVRPTEKQATS-WDELPPEIKRTYDKLGIPEAEKKRLI------AG 123
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ + EH DL K+Y TV+PVGDN +AALN+A
Sbjct: 124 VAAQYESEVVYHKIREDLERKGVIFVDTDTGLKEHEDLFKEYFGTVIPVGDNKFAALNTA 183
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P V + L YFRIN + GQFERTLII DE SYV Y+EGCTAP
Sbjct: 184 VWSGGSFIYVPPNVHVEIPLQAYFRINTENMGQFERTLIIVDENSYVHYVEGCTAPIYST 243
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE++ NA +Y+T+QNW +YN VTKR + + W
Sbjct: 244 DSLHAAVVEIIVKKNARCRYTTIQNW-------STNVYNLVTKRAVAY-EGATMEWVDGN 295
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A + Q D+G KM+HLA T+S IVSK ++ G
Sbjct: 296 IGSKVTMKYPAVYLMGEHAKGETLSVAFAGPGQHQDAGAKMVHLAPKTSSTIVSKSVARG 355
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V GAA S + +CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 356 GGRTSYRGLVQVAEGAAGSASTVKCDALLVDQISRSDTYPYVDVREDDVSMGHEATVSKV 415
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 416 SEDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 470
>gi|115440827|ref|NP_001044693.1| Os01g0830000 [Oryza sativa Japonica Group]
gi|15624065|dbj|BAB68118.1| ABC transporter subunit-like [Oryza sativa Japonica Group]
gi|20160641|dbj|BAB89586.1| ABC transporter subunit-like [Oryza sativa Japonica Group]
gi|113534224|dbj|BAF06607.1| Os01g0830000 [Oryza sativa Japonica Group]
gi|125528250|gb|EAY76364.1| hypothetical protein OsI_04296 [Oryza sativa Indica Group]
gi|125572511|gb|EAZ14026.1| hypothetical protein OsJ_03952 [Oryza sativa Japonica Group]
gi|215768088|dbj|BAH00317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 544
Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats.
Identities = 289/483 (59%), Positives = 358/483 (74%), Gaps = 5/483 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+ ++ + +YKYGF ++ + PKGL+E +R IS K EP WML++RL AYRR+L
Sbjct: 67 ESETLQNLLKREYKYGFVSDFESFSIPKGLSEATVRRISELKAEPAWMLDFRLAAYRRFL 126
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
TM P+W+ Y +D + YY+APK+ SLD+VDPELL T+++LGIP+ EQ+ LA
Sbjct: 127 TMVQPTWSDNVYEPVDLQSICYYSAPKTKPKLNSLDEVDPELLNTFDRLGIPLSEQKRLA 186
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAV DS S+ TT +EEL K GVIF ISEAI E+PDLVK+YL +VVP DN
Sbjct: 187 -----NVAVDAVIDSTSIATTHREELMKKGVIFCSISEAIREYPDLVKRYLGSVVPPADN 241
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+YAALNSAVF+DGSF Y+PK CPME+STYFRIN+K TGQFERTLI+ADE S VSYLEG
Sbjct: 242 YYAALNSAVFSDGSFCYVPKDTVCPMEISTYFRINDKETGQFERTLIVADERSTVSYLEG 301
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP D NQLHAAVVELV + AEIKYSTVQNWY GD +GKGGIYNFVTKRG C+G S
Sbjct: 302 CTAPAYDSNQLHAAVVELVCEEQAEIKYSTVQNWYSGDEEGKGGIYNFVTKRGRCKGRGS 361
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
KISWTQ+ETGSAITWKYPS L G+ + GEFYS+A++ +QQ D+GTKM+H KN+ SRI
Sbjct: 362 KISWTQVETGSAITWKYPSVELLGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRI 421
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+SKGISAG S N YRG V ++ GA ++ N +QCDSLLIG+N A+T P I+ S +E
Sbjct: 422 ISKGISAGKSRNCYRGLVQINSGAENAYNSSQCDSLLIGDNAAANTYPTIQVGCISSRVE 481
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+TSKI ++ LFY QRGI E A+A ++ GF R V + LP EFA E L+++ LEG
Sbjct: 482 HEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFENLPYEFAHEMDALMNLKLEG 541
Query: 487 SVG 489
SVG
Sbjct: 542 SVG 544
>gi|304383859|ref|ZP_07366316.1| FeS assembly protein SufB [Prevotella marshii DSM 16973]
gi|304334937|gb|EFM01210.1| FeS assembly protein SufB [Prevotella marshii DSM 16973]
Length = 481
Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats.
Identities = 297/488 (60%), Positives = 381/488 (78%), Gaps = 7/488 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ E V+K+ +Y++GF TN+ D GLNED++R IS+KK EP+W+L++RL A
Sbjct: 1 MESNEKNAYVKKVAEQKYEFGFTTNVHTDIIDTGLNEDVVRLISSKKGEPEWLLDFRLKA 60
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ W T+K PSWA + P ID+ + YYA P + ++DPE+ +T+EKLGIP+ E
Sbjct: 61 FHYWKTLKQPSWAHVHLPEIDYQAISYYADPLAKKPKN--KEIDPEMEKTFEKLGIPLEE 118
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L+G AVDA+ DSVSV TTFKE+L + GVIF I EA+ +HP+LV+KY+ TVV
Sbjct: 119 RLALSGT-----AVDAIMDSVSVKTTFKEKLAEKGVIFCSIGEAVKDHPELVRKYIGTVV 173
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DNF+AALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLI+A++ +YV
Sbjct: 174 PYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIVAEDDAYV 233
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SYLEGCTAP RDENQLHAA+VE++ DNAE+KYSTVQNWYPGD GKGG++N VTKRG+
Sbjct: 234 SYLEGCTAPMRDENQLHAAIVEIIVNDNAEVKYSTVQNWYPGDENGKGGVFNLVTKRGEL 293
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
RG+ SK+SWTQ+ETGSAITWKYPSC+LRG+ S EFYS+A++N +Q+ D+GTKM+H+ KN
Sbjct: 294 RGVNSKLSWTQVETGSAITWKYPSCILRGDNSQAEFYSVAVTNNYQEADTGTKMIHIGKN 353
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S I+SKGISAG S N+YRG V A ++RN++ CDSLL+G+ CGAHT PY++ N
Sbjct: 354 TKSTIISKGISAGHSQNSYRGLVRATVNADNARNYSSCDSLLLGSECGAHTFPYMDIHND 413
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ +EHEATTSKI ++ LFYC QRGIP E A+ LIVNG+ +EVL KLPMEFAVEAQKL+
Sbjct: 414 TAVIEHEATTSKIGEDQLFYCNQRGIPTEQAVGLIVNGYAKEVLNKLPMEFAVEAQKLLS 473
Query: 482 ISLEGSVG 489
+SLEG+VG
Sbjct: 474 VSLEGTVG 481
>gi|218289785|ref|ZP_03493985.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius LAA1]
gi|258510983|ref|YP_003184417.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|218240076|gb|EED07261.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius LAA1]
gi|257477709|gb|ACV58028.1| FeS assembly protein SufB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 465
Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats.
Identities = 214/476 (44%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+++Y+YGF +I V K KGL+ + IS KNEP WM ++RL A + P+W
Sbjct: 7 DMEEYQYGFHDPDIAVAKLDKGLSRKTVEQISMMKNEPGWMTDFRLRALEIFEQKPMPTW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P G +S D+V E+ RT+++LGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDIRYYVKPTEKKG-RSWDEVPEEIKRTFDRLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +++L+K GVIFM A+ E+P+L K+Y TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMRQDLEKMGVIFMDTDSALREYPELFKEYFGTVVPPEDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGVRC + L YFRIN + GQFERTLII DE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVRCEIPLQAYFRINSENMGQFERTLIICDEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIIVKSGARCRYTTIQNWAP-------NIYNLVTKRAVAY-RNATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYPS + E + SIA++ Q D+G K++HLA NTTS IVSK IS
Sbjct: 290 NIGSKLTMKYPSVYMMEEGAKAMVLSIAVAGRGQHQDAGAKVVHLAPNTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S A ++ +CD+L++ +N + TIPY E N LEHEA+ SK
Sbjct: 350 HGGKTTYRGLASFGPNAKGAKANIKCDTLILDDNSTSDTIPYNEIMNDDVTLEHEASVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGIPEE A +IV GF+ ++LPME+AVE +LI + +EGS+G
Sbjct: 410 VSEEQLFYLMSRGIPEEEATRMIVMGFIEPFTRELPMEYAVEMNRLIKLEMEGSIG 465
>gi|242624264|ref|YP_003002182.1| ABC transporter [Aureoumbra lagunensis]
gi|239997372|gb|ACS36894.1| ABC transporter [Aureoumbra lagunensis]
Length = 480
Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats.
Identities = 299/479 (62%), Positives = 377/479 (78%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V +I YKYGF T+I+ ++ P GLNE I +S KK EP++M + RL A++ W +++
Sbjct: 7 VEQIVNKSYKYGFSTDIENERLPIGLNEQTIFLLSQKKEEPEFMYDMRLKAFQVWKKLEE 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+WA + +P+ID+ + YY+APK SLD+VDPEL++T+EKLGI + EQ+ LA
Sbjct: 67 PNWAALEFPSIDYQQITYYSAPKKKKKYDSLDEVDPELIKTFEKLGISLNEQKRLA---- 122
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVS+ TTFK+EL K GVIF ISEAI ++P LVK+YL VVP GDN++AA
Sbjct: 123 -NVAVDAVFDSVSIATTFKKELSKYGVIFCSISEAIEKYPKLVKEYLGKVVPPGDNYFAA 181
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSF Y+PK V+CP+ELSTYFRIN+ +GQFERTL+IA++ SYVSYLEGCTAP
Sbjct: 182 LNSAVFSDGSFCYVPKNVKCPIELSTYFRINDMESGQFERTLLIAEKNSYVSYLEGCTAP 241
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
QRD NQLHAA+VELVALDNAEIKYSTVQNWY GD G GGIYNFVTKRG C G SKISW
Sbjct: 242 QRDVNQLHAAIVELVALDNAEIKYSTVQNWYAGDEDGLGGIYNFVTKRGLCAGKNSKISW 301
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L G+ S GEFYS+A+++ +QQ D+GTKM+H+ NT S I+SKG
Sbjct: 302 TQIETGSAITWKYPSCILAGDNSSGEFYSVALTSNYQQADTGTKMIHIGNNTRSTIISKG 361
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS GFS N+YRG+V V A ++RNF+QCDSLLIG+ A+T PYI+ KNS+ +EHEA+
Sbjct: 362 ISTGFSKNSYRGQVKVQSKAQNARNFSQCDSLLIGDKSNANTFPYIDVKNSTSKVEHEAS 421
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SKI +E LFY QRGI E AI+++++GF ++V KLPMEF+VEA KL+ + LEGSVG
Sbjct: 422 VSKIGEEQLFYFAQRGIDNEDAISMLISGFCKDVFLKLPMEFSVEADKLLSLKLEGSVG 480
>gi|167570618|ref|ZP_02363492.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
oklahomensis C6786]
Length = 484
Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats.
Identities = 310/474 (65%), Positives = 380/474 (80%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E+++R IS +K EP+++L+WRL A+ WLTM P W ++
Sbjct: 16 QSYRHGFVTDIESDSLPPGLDENVVREISRRKREPEFLLKWRLAAFEHWLTMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+ LDDVDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDRPKRLDDVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPTDNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPEGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD++G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDARGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V RGAA +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARGAAGARNHTQCDSLLIGPQCGAHTFPYVESARRDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCRQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|126662699|ref|ZP_01733698.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
gi|126626078|gb|EAZ96767.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
Length = 482
Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats.
Identities = 325/489 (66%), Positives = 390/489 (79%), Gaps = 7/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E KV +++ +Y+YGF T + + P GLNEDI+R IS KK EP+WM EWRL
Sbjct: 1 MSKYTEDDLKV-ELENKEYEYGFYTELDSETFPIGLNEDIVRAISKKKEEPEWMTEWRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A++ W M +P WA I Y DF + YY+APK + L+DVDPELL Y+KLGI +
Sbjct: 60 AFKAWQEMIEPEWANIHYEKPDFQAISYYSAPKKADPNKKLEDVDPELLAMYKKLGISVD 119
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ + + VA+D V DSVSV TTFK+ L + G+IF ISEAI EHP+LV+KYL T+
Sbjct: 120 EQKKM-----NNVAIDIVVDSVSVATTFKKTLNEKGIIFCSISEAIKEHPELVRKYLGTI 174
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++ADEGSY
Sbjct: 175 VPQKDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINQGGTGQFERTLLVADEGSY 234
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAP RDENQLHAAVVEL+A+++AEIKYSTVQNWYPG+ +GKGG+YNFVTKRG
Sbjct: 235 VSYLEGCTAPSRDENQLHAAVVELIAMEDAEIKYSTVQNWYPGNKEGKGGVYNFVTKRGL 294
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +KISWTQ+ETGSA+TWKYPS +L+G+ S GEFYSIA++N FQQ D+GTKM+HL K
Sbjct: 295 C-EKNAKISWTQVETGSAVTWKYPSVVLKGDNSIGEFYSIAVTNNFQQADTGTKMIHLGK 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V + A ++RNF+QCDSLL+GN+CGAHT PYIESKN
Sbjct: 354 NTKSTIISKGISAGKSQNSYRGLVQIGARAENARNFSQCDSLLMGNDCGAHTFPYIESKN 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+S +EHEATTSKI ++ +FYC QRGIP E AIALIVNGF +EVL KLPMEFAVEAQKL+
Sbjct: 414 ASAKIEHEATTSKIGEDQVFYCNQRGIPTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLL 473
Query: 481 DISLEGSVG 489
+ISLEGSVG
Sbjct: 474 EISLEGSVG 482
>gi|152992592|ref|YP_001358313.1| Fe-S cluster assembly protein SufB [Sulfurovum sp. NBC37-1]
gi|151424453|dbj|BAF71956.1| Fe-S cluster assembly protein SufB [Sulfurovum sp. NBC37-1]
Length = 478
Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats.
Identities = 309/481 (64%), Positives = 383/481 (79%), Gaps = 6/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ K +Y GFE +I+ D P GLNED IRFIS KK EP+WMLE RL A R+WLTM
Sbjct: 4 EELNKAVSGEYNLGFEIDIETDVVPPGLNEDTIRFISKKKEEPEWMLELRLKALRKWLTM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++P WA + Y ID+ + YYAAPK+ GP+SLD+VDP++L YEKLGIP+ EQ+ L G+
Sbjct: 64 EEPHWAHLEYEPIDYQSISYYAAPKTG-GPESLDEVDPKILEAYEKLGIPLEEQKQLQGI 122
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V V TT+ EEL+K GVIF IS+AI ++P+L++KY+ +VVP+ DN++
Sbjct: 123 AVDAVVDSVS-----VKTTYSEELQKHGVIFCSISDAIRDYPELIQKYMFSVVPMADNYF 177
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVFTDG+FVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADEGSYVSY EGC+
Sbjct: 178 AALNSAVFTDGTFVYIPKGVRCPMELSTYFRINALNTGQFERTLIVADEGSYVSYNEGCS 237
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDENQLHAAVVELV + +AEIKYST+QNWYPGD GKGGIYNFVTKRG C+G SKI
Sbjct: 238 APTRDENQLHAAVVELVTMKDAEIKYSTIQNWYPGDENGKGGIYNFVTKRGLCKGDNSKI 297
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++ QQ D+GTKM+HL KNT+S I+S
Sbjct: 298 SWTQVETGSAITWKYPSCILKGDNSVGEFYSVAVTTLAQQADTGTKMIHLGKNTSSTIIS 357
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISA NTYRG V + AA+SRN+++CDSLLIG+ CGAHT PY+ESK++ +EHE
Sbjct: 358 KGISAMKGQNTYRGLVKIGSDAANSRNYSECDSLLIGDRCGAHTFPYLESKDTQGQIEHE 417
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATTSKISDE LFY QRGI EE A+++IV+GF +EV +LPME+AVEA+ L++++LEGSV
Sbjct: 418 ATTSKISDEQLFYLRQRGINEEDAVSMIVHGFCKEVFSQLPMEYAVEAKALLELTLEGSV 477
Query: 489 G 489
G
Sbjct: 478 G 478
>gi|167619311|ref|ZP_02387942.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis Bt4]
gi|257138527|ref|ZP_05586789.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis E264]
Length = 484
Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 377/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E+++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QSYRHGFVTDIESDSLPPGLDENVVREISRRKREPAFLLKWRLAAFERWLAMAPPDWGQL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLDDVDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDRPKSLDDVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVEL+A D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELIAHDDAHIKYSTVQNWYPGDANGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARDDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|83719110|ref|YP_442329.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis E264]
gi|83652935|gb|ABC36998.1| ABC transporter [Burkholderia thailandensis E264]
Length = 630
Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 377/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E+++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 162 QSYRHGFVTDIESDSLPPGLDENVVREISRRKREPAFLLKWRLAAFERWLAMAPPDWGQL 221
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLDDVDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 222 RIAPIDFQAQSYYSAPKSLKDRPKSLDDVDPKLLETYEKLNVPLHERARLAG-----VAV 276
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 277 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 336
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 337 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 396
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVEL+A D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 397 QLHAAVVELIAHDDAHIKYSTVQNWYPGDANGVGGIYNFVTKRGLCAGARSRIAWTQIET 456
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 457 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 516
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 517 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARDDAVVEHEATTTRIS 576
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 577 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 630
>gi|329895577|ref|ZP_08271073.1| Iron-sulfur cluster assembly protein SufB [gamma proteobacterium
IMCC3088]
gi|328922256|gb|EGG29606.1| Iron-sulfur cluster assembly protein SufB [gamma proteobacterium
IMCC3088]
Length = 479
Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats.
Identities = 323/482 (67%), Positives = 393/482 (81%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + ++ +Y GF TNI+ D P GL+E +IR ISA+K EP+W+LEWRL AYRRWL M
Sbjct: 4 EHINEVIEREYTPGFTTNIESDTLPPGLDESVIRTISARKEEPEWLLEWRLDAYRRWLEM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P WA+++YP ID + + Y++ PKS+ P+SLD+VDPELL TYEKLGIP+ EQ +LAG
Sbjct: 64 TPPEWAQVQYPPIDHNSISYFSMPKSMADKPKSLDEVDPELLATYEKLGIPLHEQAMLAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
VAVDAVFDSVSV TTF+E L ++GVIF ISEA E+PDLV++YL +VVP DN+
Sbjct: 124 -----VAVDAVFDSVSVATTFRENLAEAGVIFCSISEAAREYPDLVRQYLGSVVPKTDNY 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAV++DGSFVYIPKGVRCPMELSTYFRINE TGQFERTLI+A EGS+VSYLEGC
Sbjct: 179 YAALNSAVYSDGSFVYIPKGVRCPMELSTYFRINESNTGQFERTLIVAAEGSHVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD++GKGGIYNFVTKRG +K
Sbjct: 239 TAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGVAHNR-AK 297
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A+++ QQ D+GTKM+HL +NT S I+
Sbjct: 298 ISWTQVETGSAITWKYPSCVLKGDDSVGEFYSVALTHNHQQADTGTKMIHLGRNTKSTII 357
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S+N YRG V + A +RN+TQCDSLLIG+ C AHT PYIESK S +EH
Sbjct: 358 SKGISAGQSSNAYRGLVRMSPRAVGARNYTQCDSLLIGDRCAAHTFPYIESKQPSAVIEH 417
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ L+ C QRGI E A+++IVNGF +EV ++LPMEFA+EA KL+++SLEGS
Sbjct: 418 EATTSKVSDDQLYLCQQRGIDPEKAVSMIVNGFCKEVFKELPMEFAMEAGKLLEVSLEGS 477
Query: 488 VG 489
VG
Sbjct: 478 VG 479
>gi|167581225|ref|ZP_02374099.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis TXDOH]
Length = 484
Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 377/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E+++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDENVVREISRRKREPAFLLKWRLAAFERWLAMAPPDWGQL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLDDVDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDRPKSLDDVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVEL+A D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELIAHDDAHIKYSTVQNWYPGDANGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARDDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|284990569|ref|YP_003409123.1| FeS assembly protein SufB [Geodermatophilus obscurus DSM 43160]
gi|284063814|gb|ADB74752.1| FeS assembly protein SufB [Geodermatophilus obscurus DSM 43160]
Length = 480
Score = 520 bits (1338), Expect = e-145, Method: Composition-based stats.
Identities = 193/498 (38%), Positives = 300/498 (60%), Gaps = 27/498 (5%)
Query: 1 MVAVRETV--------DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEP 51
M + ++ V +++ ++ +Y+YG+ ++ A +GL+ED++R ISA+K+EP
Sbjct: 1 MTSTQQPVTGTPLTQDEQIEQL--GRYQYGWADADVAGSAARRGLSEDVVRDISARKDEP 58
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
+WMLE RL A + + P W IDF ++ Y+ +D+ ++ T
Sbjct: 59 EWMLERRLKALKLFGRKPMPDWGS-DLSGIDFQNIKYFVRSTEAQAAS-WEDLPDDIKNT 116
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
Y++LGIP E++ L V A ++S V ++EL+ GV+F+ A+ EHP+
Sbjct: 117 YDRLGIPEAEKQRLV------SGVAAQYESEVVYHQIQKELEDQGVVFLDTDSALKEHPE 170
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+ ++Y +V+P GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERT
Sbjct: 171 IFREYFGSVIPSGDNKFAALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERT 230
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LII DEG+YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +
Sbjct: 231 LIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNV 283
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
YN VTKR + + W GS +T KYP+ + GE + GE SIA + Q D+
Sbjct: 284 YNLVTKRAIAH-EGATMEWVDGNLGSKVTMKYPAVWMTGEHAKGEVLSIAFAGEGQHQDA 342
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
G KM+H A NT+S IVSK ++ G +YRG V V GA S++ +CD+LL+ +
Sbjct: 343 GAKMVHAAPNTSSTIVSKSVARGGGRTSYRGLVQVDEGAHGSKSTVKCDALLVDTISRSD 402
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T PY++ + + HEAT S++SD+ LFY + RG+ E+ A+A++V GFV + ++LPME
Sbjct: 403 TYPYVDVREDDVAMGHEATVSRVSDDQLFYLMSRGLSEDEAMAMVVRGFVEPIARELPME 462
Query: 472 FAVEAQKLIDISLEGSVG 489
+A+E +LI++ +EG+VG
Sbjct: 463 YALELNRLIELQMEGAVG 480
>gi|146329698|ref|YP_001209736.1| FeS assembly protein SufB [Dichelobacter nodosus VCS1703A]
gi|146233168|gb|ABQ14146.1| FeS assembly protein SufB [Dichelobacter nodosus VCS1703A]
Length = 484
Score = 520 bits (1338), Expect = e-145, Method: Composition-based stats.
Identities = 299/490 (61%), Positives = 383/490 (78%), Gaps = 7/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M +E ++ + +Y++GF T+I+ P GLNE +IR IS+ K EPDW+L WRL
Sbjct: 1 MSEEKEKNAALKDMAQSEYRFGFTTDIEQLTLPAGLNESVIRHISSMKKEPDWLLNWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPI 119
AYR WLT++ P W + I++ ++ Y++APKS P+SL +V+PE+L TY+KLG+PI
Sbjct: 61 AYRIWLTLEQPDWGHLTIAPINYQEISYFSAPKSQTNAPKSLAEVEPEILETYKKLGVPI 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQE+LAG VAVDAVFDSVSV T+++E L K G+IF SEA+ +PDLV++YL T
Sbjct: 121 EEQELLAG-----VAVDAVFDSVSVATSYRERLAKDGIIFCSFSEAVQNYPDLVRRYLGT 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VV DN++AALN+AVFTDGSF YIP+ VRCPMELSTYFRIN TGQFERTLI+A++G+
Sbjct: 176 VVGADDNYFAALNAAVFTDGSFCYIPERVRCPMELSTYFRINAANTGQFERTLIVAEKGA 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSYLEGCTAPQRD NQLHAAVVE+VA + AE+KYSTVQNWYPGD +GKGGIYNFVTKRG
Sbjct: 236 YVSYLEGCTAPQRDRNQLHAAVVEIVAQEEAEVKYSTVQNWYPGDKEGKGGIYNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+KISWTQ+ETGSAITWKYPS +L+G+ S GEF+S+A++ +QQ D+G KM+H+
Sbjct: 296 LA-ARAAKISWTQVETGSAITWKYPSVILQGDDSVGEFFSVALTRDYQQADTGAKMIHIG 354
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S IVSKGIS G++ N YRG V + A ++RNF+QCDSLLIG+ CGAHT PY+ ++
Sbjct: 355 KNTKSTIVSKGISLGYAQNAYRGLVKILPSADNARNFSQCDSLLIGSQCGAHTFPYLITQ 414
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S ++EHEATT+KI + +FYCLQRG+ E+ A+ LIVNGF +EV +LPMEFAVEAQ+L
Sbjct: 415 NASAHVEHEATTAKIGADQIFYCLQRGLSEQDAVNLIVNGFCKEVYNQLPMEFAVEAQRL 474
Query: 480 IDISLEGSVG 489
ID+ LEGSVG
Sbjct: 475 IDLKLEGSVG 484
>gi|42521818|ref|NP_967198.1| cysteine desulfurase activator complex subunit SufB [Bdellovibrio
bacteriovorus HD100]
gi|39574348|emb|CAE77852.1| ABC transporter permease [Bdellovibrio bacteriovorus HD100]
Length = 485
Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats.
Identities = 301/490 (61%), Positives = 376/490 (76%), Gaps = 9/490 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ +YKYGF T+I+ D+ GLNEDIIR ISAKKNEP+WMLE+RL A+R
Sbjct: 1 MDNNKSSSNPLESYEYKYGFTTDIETDQVQLGLNEDIIRLISAKKNEPEWMLEYRLKAFR 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPK----SIVGPQSLDDVDPELLRTYEKLGIPI 119
WLTM +P WA + YP IDF + YY+APK P+SLDD+DPEL++T+EKLGIP+
Sbjct: 61 HWLTMVEPEWAHVSYPKIDFQAIRYYSAPKKATDEADKPKSLDDLDPELIKTFEKLGIPL 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ ++G+ V V TT E L K+GVIF ISEAI +HPDLVKKYL +
Sbjct: 121 TEQKRISGIAVDVVFDSVS-----VGTTHTEVLDKAGVIFCSISEAIHKHPDLVKKYLGS 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN+YAALN+AVFTDGSF YIPKGVRCP++LSTYFRIN K TGQFERTL++ DEG
Sbjct: 176 VVPHTDNYYAALNAAVFTDGSFCYIPKGVRCPIDLSTYFRINAKDTGQFERTLLVCDEGG 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV+YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY GD +G+GGIYNFVTKRG
Sbjct: 236 YVNYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYTGDKEGRGGIYNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
G SKISWTQ+E+GSAITWKYPSC+L+GE S G FYS+A+++ Q D+GTKM+H+
Sbjct: 296 KALGKYSKISWTQVESGSAITWKYPSCILQGEGSEGAFYSVALTHDLMQADTGTKMIHIG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I+SKGIS S+N YRG+V + A ++RN++QCDS+L+G+ AHT PYIE K
Sbjct: 356 KNTKSTIISKGISTDKSSNAYRGQVKILPSAENARNYSQCDSMLVGDQSSAHTYPYIEVK 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEATTS+IS++ +FY RG+ E I+++VNGF +EV ++LP+EF+VEA KL
Sbjct: 416 NKTATIEHEATTSRISEDQIFYLQSRGLDMEKTISMLVNGFCKEVFKELPLEFSVEAVKL 475
Query: 480 IDISLEGSVG 489
I++ LE SVG
Sbjct: 476 IEMKLENSVG 485
>gi|215400779|ref|YP_002327540.1| hypothetical protein YCF24 [Vaucheria litorea]
gi|194441229|gb|ACF70957.1| hypothetical protein YCF24 [Vaucheria litorea]
Length = 481
Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats.
Identities = 289/486 (59%), Positives = 373/486 (76%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + K++ + YKYGF T I+ + GL+E+II+ IS KK+EP +ML +R+ AY+
Sbjct: 1 MNNSEKKIQNLVHQPYKYGFSTTIETETFLPGLSEEIIQLISQKKDEPQFMLNFRIKAYK 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
RW + P W+++ P +++ ++ YY+APK +L+++DPEL RT++KLGI I EQ+
Sbjct: 61 RWKQLIFPEWSQLSIPKLNYQNISYYSAPKIKKELSNLNELDPELKRTFDKLGISISEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LA VAVD VFDSVS+ TTFKEEL K GVIF ISEAI +P+++KK+L +VVP+
Sbjct: 121 KLA-----NVAVDVVFDSVSITTTFKEELAKFGVIFCSISEAILNYPNIIKKFLGSVVPI 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN++AALNS VFTDGSF YIPK + CP+ELSTYFRIN + +GQFERTLIIA+EGSYVSY
Sbjct: 176 SDNYFAALNSCVFTDGSFCYIPKNIHCPLELSTYFRINNQESGQFERTLIIAEEGSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQ D NQLHAA+VEL+A NAEIKYSTVQNWY GD+ GKGGI NFVTKRG C
Sbjct: 236 LEGCTAPQYDTNQLHAAIVELIAFKNAEIKYSTVQNWYAGDTNGKGGILNFVTKRGLCVE 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+KISWTQ+ETGS+ITWKYPSC+L G + GEFYSIA++ +QQ D+GTKM+H+ NT
Sbjct: 296 ENAKISWTQVETGSSITWKYPSCILLGNNTKGEFYSIALTKNYQQADTGTKMIHIGANTK 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S+I+SKGISA FS N+YRG V + A +SRNF+QCDSLL+GN A+T PYI+ NS+
Sbjct: 356 SQIISKGISADFSKNSYRGLVRIGLKAFNSRNFSQCDSLLLGNQSQANTFPYIQVTNSTA 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEA+TSKI +E +FY LQRGI E AI+LI++GF ++V +LPMEFA+EA KL+ +
Sbjct: 416 KIEHEASTSKIGEEQIFYFLQRGINLEEAISLIISGFCKDVFTELPMEFAMEADKLLSLK 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|258623334|ref|ZP_05718339.1| Protein sufB [Vibrio mimicus VM573]
gi|258584394|gb|EEW09138.1| Protein sufB [Vibrio mimicus VM573]
Length = 498
Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats.
Identities = 286/496 (57%), Positives = 368/496 (74%), Gaps = 16/496 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV E ++ ++YK GF T ++ D +G+NE ++R ISAK+NEP+WMLE+RL
Sbjct: 12 MSAV-EIQPDIQAAMGNKYKAGFFTQLENDTLQQGINEQVVRAISAKRNEPEWMLEFRLE 70
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD-------PELLRTYE 113
AYR W M++P W + YP++D+ YY+AP D D E+ +E
Sbjct: 71 AYRIWQQMEEPHWLKADYPSLDYQSYSYYSAPACAKCGDDSDFCDGSTPFLTQEVEHAFE 130
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+LG+P+RE ++VAVDA+FDSVSV TT++EELK+ G+IF SEAI ++PDLV
Sbjct: 131 QLGVPVRE--------GAEVAVDAIFDSVSVSTTYREELKQHGIIFCSFSEAIRDYPDLV 182
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++YL +VVP DNF+AALN+AV +DGSFVYIP GV CP ELSTYFRIN+ TGQFERT++
Sbjct: 183 RRYLGSVVPPKDNFFAALNAAVASDGSFVYIPPGVHCPRELSTYFRINQAKTGQFERTIL 242
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IADEG++VSY+EGC+AP RD QLHAAVVE++ NA++KYSTVQNW+ G +GGI N
Sbjct: 243 IADEGAFVSYIEGCSAPVRDSYQLHAAVVEVIVHKNAQVKYSTVQNWFSGAEGSQGGILN 302
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKR C G SK+SWTQ ETGSAITWKYPS +L G+ S GEFYS+A++NG Q+ D+GT
Sbjct: 303 FVTKRALCEGENSKMSWTQSETGSAITWKYPSVILLGDNSVGEFYSVALTNGEQRADTGT 362
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ KNT S I+SKGISAG S N+YRG V + A+ +RNFTQCDS+LIG CGAHT
Sbjct: 363 KMIHIGKNTRSTIISKGISAGRSENSYRGLVKILPSASGARNFTQCDSMLIGAECGAHTF 422
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PY+E +N + +EHEATTS+I ++ LFYCLQRGI EE AI++IVNGF +EV +LP+EFA
Sbjct: 423 PYVEVRNPTAQVEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKEVFSELPLEFA 482
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLE SVG
Sbjct: 483 VEAQKLLSISLEHSVG 498
>gi|167563448|ref|ZP_02356364.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
oklahomensis EO147]
Length = 484
Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats.
Identities = 311/474 (65%), Positives = 380/474 (80%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E+++R IS K EP+++L+WRL A+ RWLTM P W ++
Sbjct: 16 QSYRHGFVTDIESDSLPPGLDENVVREISLSKREPEFLLKWRLAAFERWLTMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+ LDDVDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDRPKRLDDVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPTDNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPEGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD++G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDARGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V RGAA +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARGAAGARNHTQCDSLLIGPQCGAHTFPYVESARRDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCRQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|326490958|dbj|BAJ90146.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493946|dbj|BAJ85435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 536
Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats.
Identities = 283/484 (58%), Positives = 360/484 (74%), Gaps = 5/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ + ++ + +YKYGF ++ + PKGL+E +R IS K EP WML++RL AYRR+
Sbjct: 58 DEAEALQNLLKREYKYGFVSDFESFSIPKGLSEATVRRISELKAEPAWMLDFRLAAYRRF 117
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
LTM +P+W+ Y +D L +Y+APK+ SLD+VDPELL+T+++LGIP+ EQ+ L
Sbjct: 118 LTMAEPTWSDNVYSPVDLQSLCFYSAPKTKPKLNSLDEVDPELLKTFDRLGIPLGEQKRL 177
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ VAVDAV DS S+ TT +E L GVIF ISEAI E+PDL+K+Y+ ++VP GD
Sbjct: 178 S-----NVAVDAVIDSTSIATTHREALMAKGVIFCSISEAIREYPDLIKRYIGSIVPPGD 232
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N+YAALNSAVF+DGSF Y+PK CPME+STYFRIN+K TGQFERTLI+ADE S VSYLE
Sbjct: 233 NYYAALNSAVFSDGSFCYVPKDTVCPMEISTYFRINDKETGQFERTLIVADERSTVSYLE 292
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP D NQLHAAVVELV + AEIKYSTVQNWY GD +GKGGIYNFVTKRG C+G
Sbjct: 293 GCTAPAYDSNQLHAAVVELVCEEGAEIKYSTVQNWYAGDEKGKGGIYNFVTKRGRCKGRG 352
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
SKISWTQ+ETGSAITWKYPS L G+ + GEFYS+A++ +QQ D+GTKM+H KN+ SR
Sbjct: 353 SKISWTQVETGSAITWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSR 412
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I+SKGISAG S N YRG V ++ GA ++ N +QCDSLLIG+ A+T P I+ +S +
Sbjct: 413 IISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRV 472
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+TSKI ++ LFY QRGI E A+A ++ GF R V + LP EFA E L+++ LE
Sbjct: 473 EHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLE 532
Query: 486 GSVG 489
GSVG
Sbjct: 533 GSVG 536
>gi|326525753|dbj|BAJ88923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 536
Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats.
Identities = 284/484 (58%), Positives = 360/484 (74%), Gaps = 5/484 (1%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ + ++ + +YKYGF ++ + PKGL+E +R IS K EP WML++RL AYRR+
Sbjct: 58 DEAEALQNLLKREYKYGFVSDFESFSIPKGLSEATVRRISELKAEPAWMLDFRLAAYRRF 117
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
LTM +P+W+ Y +D L +YAAPK+ SLD+VDPELL+T+++LGIP+ EQ+ L
Sbjct: 118 LTMAEPTWSDNVYSPVDLQSLCFYAAPKTKPKLNSLDEVDPELLKTFDRLGIPLGEQKRL 177
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ VAVDAV DS S+ TT +E L GVIF ISEAI E+PDL+K+Y+ ++VP GD
Sbjct: 178 S-----NVAVDAVIDSTSIATTHREALMAKGVIFCSISEAIREYPDLIKRYIGSIVPPGD 232
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N+YAALNSAVF+DGSF Y+PK CPME+STYFRIN+K TGQFERTLI+ADE S VSYLE
Sbjct: 233 NYYAALNSAVFSDGSFCYVPKDTVCPMEISTYFRINDKETGQFERTLIVADERSTVSYLE 292
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP D NQLHAAVVELV + AEIKYSTVQNWY GD +GKGGIYNFVTKRG C+G
Sbjct: 293 GCTAPAYDSNQLHAAVVELVCEEGAEIKYSTVQNWYAGDEKGKGGIYNFVTKRGRCKGRG 352
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
SKISWTQ+ETGSAITWKYPS L G+ + GEFYS+A++ +QQ D+GTKM+H KN+ SR
Sbjct: 353 SKISWTQVETGSAITWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSR 412
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I+SKGISAG S N YRG V ++ GA ++ N +QCDSLLIG+ A+T P I+ +S +
Sbjct: 413 IISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRV 472
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA+TSKI ++ LFY QRGI E A+A ++ GF R V + LP EFA E L+++ LE
Sbjct: 473 EHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLE 532
Query: 486 GSVG 489
GSVG
Sbjct: 533 GSVG 536
>gi|269926803|ref|YP_003323426.1| FeS assembly protein SufB [Thermobaculum terrenum ATCC BAA-798]
gi|269790463|gb|ACZ42604.1| FeS assembly protein SufB [Thermobaculum terrenum ATCC BAA-798]
Length = 469
Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats.
Identities = 202/490 (41%), Positives = 292/490 (59%), Gaps = 22/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E + D+Y+YGF+ K+ KGL+ ++++ IS K EP+WM ++RL
Sbjct: 1 MAITEEELRHSE----DRYEYGFKDPENYVFKSRKGLSPEVVKEISWMKGEPEWMTKFRL 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A +L P+W I+FDD+YYY P G +S D+V + +T+++LGIP
Sbjct: 57 KALDHFLKRPMPTWGG-DLSEINFDDIYYYVKPVERQG-RSWDEVPDYIKQTFDRLGIPE 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG V A ++S V ++EL+ GVIF+ + E+P+L K+Y T
Sbjct: 115 AERKFLAG-------VGAQYESEVVYHNLRKELESQGVIFLDTDTGLKEYPELFKEYFGT 167
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN +AALNSAV++ GSF+Y+P+GV+ + L YFRIN + GQFERTLIIAD+GS
Sbjct: 168 VVPPNDNKFAALNSAVWSGGSFIYVPEGVKVELPLQAYFRINAENMGQFERTLIIADKGS 227
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ + A ++Y+T+QNW +YN VTKR
Sbjct: 228 YVHYVEGCTAPVYSTDSLHSAVVEIIVKEGARVRYTTIQNW-------SKNVYNLVTKRA 280
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYPS L + GE S+A + Q D+G K++H+A
Sbjct: 281 VAY-KDATMEWVDGNLGSKLTMKYPSIYLMEPGAKGEILSVAFAGHGQHQDAGGKVIHVA 339
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
TTS I SK IS +YRG + V+ A H ++ +CD+LL+ T PYIE +
Sbjct: 340 PYTTSTITSKSISKNDGRASYRGLLKVYPDAHHCKSNVRCDALLLHEESRTDTYPYIEIE 399
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + HEAT SK+ +E LFY + RGI E A ++IV GF+ + ++LPME+AVE +L
Sbjct: 400 NDQVEIGHEATVSKVGEEQLFYLMSRGISEAEAYSMIVTGFIEPIAKELPMEYAVELNRL 459
Query: 480 IDISLEGSVG 489
I + +EGSVG
Sbjct: 460 IQLEMEGSVG 469
>gi|117928342|ref|YP_872893.1| FeS assembly protein SufB [Acidothermus cellulolyticus 11B]
gi|117648805|gb|ABK52907.1| Iron-regulated ABC transporter membrane component SufB
[Acidothermus cellulolyticus 11B]
Length = 470
Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats.
Identities = 197/484 (40%), Positives = 289/484 (59%), Gaps = 17/484 (3%)
Query: 7 TVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T+ + + +YK+G+ +I A +GL+E+++R ISAKK EP WMLE RL A R +
Sbjct: 3 TLQRPELDQLGRYKFGWADPDIAGASARRGLSEEVVRDISAKKGEPAWMLERRLKALRIF 62
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
P+W IDF+ + YY S D++ ++ RTY++LGIP E++ L
Sbjct: 63 EKKPLPTWG-ADLSGIDFNTIKYYVRASEKQA-NSWDELPEDIRRTYDRLGIPEAEKQRL 120
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
V A ++S V +E+L + GVIF+ + EH DL K+Y +V+P GD
Sbjct: 121 I------AGVAAQYESEVVYHKIREDLARQGVIFLDTDTGLREHEDLFKEYFGSVIPAGD 174
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N +AALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+YV Y+E
Sbjct: 175 NKFAALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVE 234
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP + LHAAVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 235 GCTAPIYSSDSLHAAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVAH-EG 286
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W GS +T KYP+ L G + GE S+A + Q D+G KM+H A T+S
Sbjct: 287 ATMEWVDGNIGSKVTMKYPAVWLVGPHAKGETLSVAFAGEGQHQDAGAKMVHAAPYTSST 346
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK ++ G +YRG V V GA S++ +CD+LL+ + T PY++ + +
Sbjct: 347 IVSKSVARGGGRTSYRGLVQVMEGAYGSKSTVKCDALLVDTISRSDTYPYVDVREDDVAM 406
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEAT SK+++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +E
Sbjct: 407 GHEATVSKVNENQLFYLMSRGLTEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQME 466
Query: 486 GSVG 489
G+VG
Sbjct: 467 GAVG 470
>gi|258627396|ref|ZP_05722178.1| Protein sufB [Vibrio mimicus VM603]
gi|262165768|ref|ZP_06033505.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus VM223]
gi|258580319|gb|EEW05286.1| Protein sufB [Vibrio mimicus VM603]
gi|262025484|gb|EEY44152.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus VM223]
Length = 487
Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats.
Identities = 286/496 (57%), Positives = 368/496 (74%), Gaps = 16/496 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV E ++ ++YK GF T ++ D +G+NE ++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSAV-EIQPDIQAAMGNKYKAGFFTQLENDTLQQGINEQVVRAISAKRNEPEWMLEFRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD-------PELLRTYE 113
AYR W M++P W + YP++D+ YY+AP D D E+ +E
Sbjct: 60 AYRIWQQMEEPHWLKADYPSLDYQSYSYYSAPACAKCGDDSDFCDGSTPFLTQEVEHAFE 119
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+LG+P+RE ++VAVDA+FDSVSV TT++EELK+ G+IF SEAI ++PDLV
Sbjct: 120 QLGVPVRE--------GAEVAVDAIFDSVSVSTTYREELKQHGIIFCSFSEAIRDYPDLV 171
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++YL +VVP DNF+AALN+AV +DGSFVYIP GV CP ELSTYFRIN+ TGQFERT++
Sbjct: 172 RRYLGSVVPPKDNFFAALNAAVASDGSFVYIPPGVHCPRELSTYFRINQAKTGQFERTIL 231
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IADEG++VSY+EGC+AP RD QLHAAVVE++ NA++KYSTVQNW+ G +GGI N
Sbjct: 232 IADEGAFVSYIEGCSAPVRDSYQLHAAVVEVIVHKNAQVKYSTVQNWFSGAEGSQGGILN 291
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKR C G SK+SWTQ ETGSAITWKYPS +L G+ S GEFYS+A++NG Q+ D+GT
Sbjct: 292 FVTKRALCEGENSKMSWTQSETGSAITWKYPSVILLGDNSVGEFYSVALTNGEQRADTGT 351
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ KNT S I+SKGISAG S N+YRG V + A+ +RNFTQCDS+LIG CGAHT
Sbjct: 352 KMIHIGKNTRSTIISKGISAGRSENSYRGLVKILPSASGARNFTQCDSMLIGAECGAHTF 411
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PY+E +N + +EHEATTS+I ++ LFYCLQRGI EE AI++IVNGF +EV +LP+EFA
Sbjct: 412 PYVEVRNPTAQVEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKEVFSELPLEFA 471
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLE SVG
Sbjct: 472 VEAQKLLSISLEHSVG 487
>gi|299830359|ref|YP_003734574.1| iron-sulfur cluster formation ABC transporter [Kryptoperidinium
foliaceum]
gi|297385061|gb|ADI40359.1| iron-sulfur cluster formation ABC transporter [Kryptoperidinium
foliaceum]
Length = 486
Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats.
Identities = 291/479 (60%), Positives = 376/479 (78%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ K+ Y+YGF TNI+ D KGLNE ++R IS KK EP ++L +RL AY++W M +
Sbjct: 13 ITKLVNKTYQYGFSTNIEKDIIEKGLNEAVVRLISEKKQEPAFLLNFRLKAYKKWQQMSE 72
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P W +++P I++ D+ YY+APKS ++LD+VDPELL T+EKLGI + EQ+ LA
Sbjct: 73 PEWPYLKFPQINYQDVTYYSAPKSQKKLKNLDEVDPELLETFEKLGISLTEQKRLA---- 128
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAVFDSVS+ TTF+EEL K GVIF ISEAI ++ L++KYL +VVP+GDN+++A
Sbjct: 129 -NVAVDAVFDSVSIGTTFQEELSKHGVIFASISEAIHDYSQLIEKYLGSVVPIGDNYFSA 187
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVFTDGSF YIP+ +CP++LSTYFRIN++ GQFERTLIIA++ SYV+YLEGCTAP
Sbjct: 188 LNSAVFTDGSFCYIPQDTKCPLDLSTYFRINDQNAGQFERTLIIAEKNSYVNYLEGCTAP 247
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
Q D NQLHAA+VEL+A +NA IKYSTVQNWY GD G GGIYNFVTKRG C G+ S ISW
Sbjct: 248 QYDTNQLHAAIVELIAFENATIKYSTVQNWYAGDEFGSGGIYNFVTKRGLCAGINSTISW 307
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGS+ITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+ +N+ SRI+SKG
Sbjct: 308 TQVETGSSITWKYPSCILMGDNSQGEFYSVALTNNYQQADTGTKMIHIGQNSRSRIISKG 367
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V+V A +RN++QCDSLLIGN+ A+T PYI +NS+ +EHEA+
Sbjct: 368 ISAGKSKNSYRGFVNVTNKAIGARNYSQCDSLLIGNSSNANTFPYISVQNSTTKIEHEAS 427
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI +E +FY LQRGI E A+ L+++GF +E+ KLP+EFA EA KL+ + LEGSVG
Sbjct: 428 TSKIGEEQIFYFLQRGIELEKAVELMISGFCQEIFTKLPLEFAAEADKLLTLKLEGSVG 486
>gi|329901921|ref|ZP_08272989.1| Iron-sulfur cluster assembly protein SufB [Oxalobacteraceae
bacterium IMCC9480]
gi|327548920|gb|EGF33542.1| Iron-sulfur cluster assembly protein SufB [Oxalobacteraceae
bacterium IMCC9480]
Length = 454
Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats.
Identities = 296/458 (64%), Positives = 369/458 (80%), Gaps = 5/458 (1%)
Query: 32 APKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAA 91
AP+GL+ED IR ISAKK EP+W+L +RL AY++WLTM +P W +P IDF + YY+A
Sbjct: 2 APRGLSEDTIRLISAKKKEPEWLLAFRLEAYQKWLTMTEPHWQNAHHPKIDFQAISYYSA 61
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
PKS S+D+VDPELLRT+EKLG+P+ E+ LAG VAVD +FDSVSV TT+K +
Sbjct: 62 PKSKPKLNSMDEVDPELLRTFEKLGVPLHERMALAG-----VAVDVIFDSVSVATTYKAK 116
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
L ++GVIF +SEA+ EHP+LVKKYL +VVP GDNFYAALNSAVFTDGSF YIPKGV+CP
Sbjct: 117 LAEAGVIFCSMSEAVLEHPELVKKYLGSVVPSGDNFYAALNSAVFTDGSFCYIPKGVKCP 176
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
M+LSTYFRIN + +GQFERTLI+A+EG+ V YLEGCTAP NQLHAAVVELVALDNA+
Sbjct: 177 MDLSTYFRINTEESGQFERTLIVAEEGASVVYLEGCTAPAFSSNQLHAAVVELVALDNAD 236
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
IKYSTVQNWY GD G GGIYNFVTKRG +G+ S+ISWTQ+ETG+AITWKYPS +L+G+
Sbjct: 237 IKYSTVQNWYAGDENGVGGIYNFVTKRGLAKGINSRISWTQVETGAAITWKYPSVILQGD 296
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ GEFYS+A++N FQQ D+GTKM+H+ KNT S IVSKGISAG S+N+YRG V + GA
Sbjct: 297 NAIGEFYSVAVTNHFQQADTGTKMVHIGKNTRSTIVSKGISAGKSSNSYRGLVRIAPGAT 356
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+RN++QCDS+LIG C A+T PYI+ +N S +EHEA+TSKI ++ LFY QRGI EA
Sbjct: 357 GARNYSQCDSMLIGEQCSANTFPYIQVRNPSAQVEHEASTSKIGEDQLFYFAQRGIDAEA 416
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
A+++I+NGF ++V Q+LP+EFAVEA L+ LEGS+G
Sbjct: 417 AVSMIINGFCKDVFQQLPLEFAVEATNLLSFKLEGSIG 454
>gi|269126458|ref|YP_003299828.1| FeS assembly protein SufB [Thermomonospora curvata DSM 43183]
gi|268311416|gb|ACY97790.1| FeS assembly protein SufB [Thermomonospora curvata DSM 43183]
Length = 470
Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats.
Identities = 201/485 (41%), Positives = 296/485 (61%), Gaps = 18/485 (3%)
Query: 7 TVDKVRKID-VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
TV+ +++ D+Y++G+ +I A +GLNE+++R ISAKKNEP WMLE RL R
Sbjct: 2 TVETHPELEGFDRYRFGWADPDIAGATARRGLNEEVVRDISAKKNEPQWMLELRLKGLRL 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ P+W IDFD++ Y+ + DD+ ++ TY+KLGIP E++
Sbjct: 62 FEKKPLPTWG-ADLTDIDFDNIKYFVRSTEKQA-TTWDDLPADIKNTYDKLGIPEAEKQR 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
L V A ++S V +++L++ GVIF+ + E+P+ K+Y TV+P G
Sbjct: 120 LV------AGVAAQYESEVVYHKIRDDLERKGVIFVDTDTGLREYPEFFKEYFGTVIPAG 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN +AALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+YV Y+
Sbjct: 174 DNKFAALNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYV 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 234 EGCTAPIYSSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVAY-E 285
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A NT+S
Sbjct: 286 GATMEWIDGNIGSKVTMKYPAVYLLGEHAKGETLSIAFAGEGQHQDAGAKMVHAAPNTSS 345
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
IVSK ++ G +YRG V V GA S++ +CD+LL+ + T PY++ +
Sbjct: 346 TIVSKSVARGGGRTSYRGLVQVQEGAVRSKSTVKCDALLVDTISRSDTYPYVDVREDDVE 405
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT SK+S++ LFY + RG+ EE A+A+IV GFV + ++LPME+A+E +LI++ +
Sbjct: 406 MGHEATVSKVSEDQLFYLMSRGLSEEEAMAMIVRGFVEPIARELPMEYALELNRLIELQM 465
Query: 485 EGSVG 489
EG+VG
Sbjct: 466 EGAVG 470
>gi|167837266|ref|ZP_02464149.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
thailandensis MSMB43]
Length = 484
Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats.
Identities = 309/474 (65%), Positives = 377/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+ED++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEDVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLDD+DP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDRPKSLDDLDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPEGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDANGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPRCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEAAALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|262171407|ref|ZP_06039085.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus MB-451]
gi|261892483|gb|EEY38469.1| iron-sulfur cluster assembly protein SufB [Vibrio mimicus MB-451]
Length = 487
Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats.
Identities = 286/496 (57%), Positives = 368/496 (74%), Gaps = 16/496 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV E ++ ++YK GF T ++ D +G+NE ++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSAV-EIQPDIQAAMGNKYKAGFFTQLENDTLQQGINEQVVRAISAKRNEPEWMLEFRLE 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD-------PELLRTYE 113
AYR W M++P W + YP++D+ YY+AP D D E+ +E
Sbjct: 60 AYRIWQQMEEPHWLKADYPSLDYQSYSYYSAPACAKCGDDSDFCDGSTPFLTQEVEHAFE 119
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+LG+P+RE ++VAVDA+FDSVSV TT++EELK+ G+IF SEAI ++PDLV
Sbjct: 120 QLGVPVRE--------GAEVAVDAIFDSVSVSTTYREELKQHGIIFCSFSEAIRDYPDLV 171
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++YL +VVP DNF+AALN+AV +DGSFVYIP GV CP ELSTYFRIN+ TGQFERT++
Sbjct: 172 RRYLGSVVPPKDNFFAALNAAVASDGSFVYIPPGVHCPRELSTYFRINQAKTGQFERTIL 231
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IADEG++VSY+EGC+AP RD QLHAAVVE++ NA++KYSTVQNW+ G +GGI N
Sbjct: 232 IADEGAFVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAQVKYSTVQNWFSGAEGSQGGILN 291
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKR C G SK+SWTQ ETGSAITWKYPS +L G+ S GEFYS+A++NG Q+ D+GT
Sbjct: 292 FVTKRALCEGENSKMSWTQSETGSAITWKYPSVILLGDNSVGEFYSVALTNGEQRADTGT 351
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ KNT S I+SKGISAG S N+YRG V + A+ +RNFTQCDS+LIG CGAHT
Sbjct: 352 KMIHIGKNTRSTIISKGISAGRSENSYRGLVKILPSASGARNFTQCDSMLIGAECGAHTF 411
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PY+E +N + +EHEATTS+I ++ LFYCLQRGI EE AI++IVNGF +EV +LP+EFA
Sbjct: 412 PYVEVRNPTAQVEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKEVFSELPLEFA 471
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLE SVG
Sbjct: 472 VEAQKLLSISLEHSVG 487
>gi|118472504|ref|YP_887437.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
gi|118173791|gb|ABK74687.1| FeS assembly protein SufB [Mycobacterium smegmatis str. MC2 155]
Length = 477
Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats.
Identities = 198/493 (40%), Positives = 298/493 (60%), Gaps = 20/493 (4%)
Query: 1 MVAVRETVDKVRK---IDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M ET ++ + +Y YG+ ++++ A +GLNE ++R ISAKKNEP+WML+
Sbjct: 1 MTTTPETAPLTQEETIASLGKYGYGWADSDVAGASAQRGLNEAVVRDISAKKNEPEWMLD 60
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
RL A R + P+W IDFD++ Y+ +++ ++ TY+KLG
Sbjct: 61 IRLKALRTFDKKPMPTWGS-DLDGIDFDNIKYFVRSTEKQAAS-WEELPEDIRNTYDKLG 118
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
IP E++ L V A ++S V +E+L+ GVIF+ A+ EHP++ K+Y
Sbjct: 119 IPEAEKQRLV------SGVAAQYESEVVYHQIREDLEAQGVIFLDTDSALREHPEIFKQY 172
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
TV+P GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII D
Sbjct: 173 FGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVD 232
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VT
Sbjct: 233 EGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKAGGRCRYTTIQNW-------SNNVYNLVT 285
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR + + W GS +T KYP+ + GE + GE S+A + Q D+G KML
Sbjct: 286 KRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKML 344
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ + T PY+
Sbjct: 345 HLAPNTSSNIVSKSVARGGGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYV 404
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ + + HEAT SK+S++ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E
Sbjct: 405 DIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALEL 464
Query: 477 QKLIDISLEGSVG 489
+LI++ +EG+VG
Sbjct: 465 NRLIELQMEGAVG 477
>gi|310641152|ref|YP_003945910.1| abc-type transport system involved in fe-s cluster assembly,
permease component [Paenibacillus polymyxa SC2]
gi|309246102|gb|ADO55669.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Paenibacillus polymyxa SC2]
Length = 465
Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats.
Identities = 213/476 (44%), Positives = 300/476 (63%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF + + KGL +I++ IS K EPDWMLE+RL A +++ M P W
Sbjct: 7 EMEEYKYGFRDEHKSIFQTGKGLTPEIVKEISKIKGEPDWMLEFRLKALKQFEKMPMPKW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DMDELDFDDIQYYVRPSEKQG-KTWEEVPTEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +++L++ GVIFM A+ EHP+++K+Y +TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMQKDLEEQGVIFMDTDTALREHPEILKEYFATVVPPADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEVPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA ++Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIICKKNARVRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KM+HLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGRGAKGMVLSIAVAGKGQHQDAGAKMIHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R A +++ +CD+L++ N + TIPY E N LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRQAQGAKSNIKCDTLILDNQSTSDTIPYNEIMNDDITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGLTEAEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|295839570|ref|ZP_06826503.1| FeS assembly protein SufB [Streptomyces sp. SPB74]
gi|197696847|gb|EDY43780.1| FeS assembly protein SufB [Streptomyces sp. SPB74]
Length = 473
Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats.
Identities = 201/490 (41%), Positives = 297/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ ++++ A +GLNED++R ISAKKNEP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADSDVAGASARRGLNEDVVRDISAKKNEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLKLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYFEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + V GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEVGEGAQGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSDDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|11467509|ref|NP_043655.1| putative ABC transporter [Odontella sinensis]
gi|1351748|sp|P49530|YCF24_ODOSI RecName: Full=UPF0051 protein ycf24; AltName: Full=ORF486
gi|1185204|emb|CAA91687.1| ORF486 [Odontella sinensis]
Length = 486
Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats.
Identities = 301/491 (61%), Positives = 382/491 (77%), Gaps = 7/491 (1%)
Query: 1 MVAVRETV--DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + + K+ YKYGF T I+ D KGLNED+I IS KKNEP ++LE+R
Sbjct: 1 MTNKSNKILNTNITKLVNQPYKYGFSTVIEKDIIEKGLNEDVICLISKKKNEPKFLLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A+++W MK P WA+I++ ID+ D+ YY+APK SLD+VDPELL+T+EKLGI
Sbjct: 61 LKAFKKWKEMKCPDWAQIKFSEIDYQDIIYYSAPKVKKKLNSLDEVDPELLKTFEKLGIS 120
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ EQ+ LA VA+DAVFDSVS+ TTFKEEL + GVIF ISEAI E+P+L++KYL
Sbjct: 121 LTEQKRLA-----NVAIDAVFDSVSIATTFKEELAECGVIFSSISEAIQEYPELIEKYLG 175
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+VVP+GDN+++ALNSAVFTDGSF YIPK CP+ELSTYFRIN++ +GQFERTLI+A++
Sbjct: 176 SVVPIGDNYFSALNSAVFTDGSFCYIPKDTICPLELSTYFRINDQKSGQFERTLIVAEKN 235
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S VSYLEGCTAPQ D NQLHAAVVELVAL+NA+IKYSTVQNWY G++ G+GGIYNFVTKR
Sbjct: 236 SQVSYLEGCTAPQYDSNQLHAAVVELVALENADIKYSTVQNWYAGNNYGEGGIYNFVTKR 295
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G C G SKISWTQ+ETGS ITWKYPSCLL G+++ GEFYS+A++N +QQ D+G+KM+H+
Sbjct: 296 GLCAGSNSKISWTQVETGSNITWKYPSCLLVGDKAKGEFYSVALTNNYQQADTGSKMIHV 355
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT SRIVSKGISAG S NTYRG V++ A +RN++QCDSLLIGN A+T P+I
Sbjct: 356 GKNTRSRIVSKGISAGNSKNTYRGLVNISNKAIGARNYSQCDSLLIGNLSNANTFPFISV 415
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+N + +EHEA+TSKI +E +FY LQRGIP E + L+++GF +EV +LP+EFA EA +
Sbjct: 416 QNPTAKIEHEASTSKIGEEQIFYFLQRGIPIEKGVELMISGFCQEVFTELPLEFAAEADR 475
Query: 479 LIDISLEGSVG 489
L+ + LEGSVG
Sbjct: 476 LLTLKLEGSVG 486
>gi|302550613|ref|ZP_07302955.1| FeS assembly protein SufB [Streptomyces viridochromogenes DSM
40736]
gi|302468231|gb|EFL31324.1| FeS assembly protein SufB [Streptomyces viridochromogenes DSM
40736]
Length = 473
Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats.
Identities = 198/490 (40%), Positives = 296/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ +++ A +G+NED++R IS KK+EP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADSDTAGASAKRGINEDVVRDISDKKSEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKATYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|302561291|ref|ZP_07313633.1| FeS assembly protein SufB [Streptomyces griseoflavus Tu4000]
gi|302478909|gb|EFL42002.1| FeS assembly protein SufB [Streptomyces griseoflavus Tu4000]
Length = 473
Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats.
Identities = 200/490 (40%), Positives = 295/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y+YG+ + A +GLNED++R ISAKK+EP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGNYEYGWADRDEAGASARRGLNEDVVRDISAKKDEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKKRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|302518372|ref|ZP_07270714.1| FeS assembly protein SufB [Streptomyces sp. SPB78]
gi|318056383|ref|ZP_07975106.1| hypothetical protein SSA3_00465 [Streptomyces sp. SA3_actG]
gi|318075716|ref|ZP_07983048.1| hypothetical protein SSA3_03137 [Streptomyces sp. SA3_actF]
gi|302427267|gb|EFK99082.1| FeS assembly protein SufB [Streptomyces sp. SPB78]
Length = 473
Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats.
Identities = 202/490 (41%), Positives = 299/490 (61%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ ++++ A +GLNED++R ISAKKNEP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADSDVAGASARRGLNEDVVRDISAKKNEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDF+++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLKLFEKKPMPNWGS-DLSGIDFENIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHPDL K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPDLFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + V GA+ S++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEVGEGASGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSDDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|21220411|ref|NP_626190.1| hypothetical protein SCO1925 [Streptomyces coelicolor A3(2)]
gi|256788463|ref|ZP_05526894.1| hypothetical protein SlivT_28576 [Streptomyces lividans TK24]
gi|289772354|ref|ZP_06531732.1| FeS assembly protein SufB [Streptomyces lividans TK24]
gi|5459392|emb|CAB50750.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289702553|gb|EFD69982.1| FeS assembly protein SufB [Streptomyces lividans TK24]
Length = 473
Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats.
Identities = 203/490 (41%), Positives = 300/490 (61%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ +++ A +G+NED++R ISAKKNEP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADSDTAGASAKRGINEDVVRDISAKKNEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 285 VAY-EGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG V + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLVEIGEGAHGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|72162386|ref|YP_290043.1| Iron-regulated ABC transporter membrane component SufB
[Thermobifida fusca YX]
gi|71916118|gb|AAZ56020.1| Iron-regulated ABC transporter membrane component SufB
[Thermobifida fusca YX]
Length = 470
Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats.
Identities = 198/475 (41%), Positives = 293/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ ++ A +GL+E+++R ISAKKNEP+WML+ RL A R + P+W
Sbjct: 12 LGTYEYGWADPDVAGASARRGLDEEVVRDISAKKNEPEWMLDLRLKALRLFTKKPLPTWG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
I+FD++ Y+ +S +++ ++ RTY++LGIP E++ L
Sbjct: 72 -ADLSRINFDNIKYFVRSTEKQA-RSWEELPEDIRRTYDRLGIPEAEKQRLV------AG 123
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ A+ EHPDL K+Y TV+P GDN +AALN+A
Sbjct: 124 VAAQYESEVVYHQIREDLEAQGVIFLDTDTALKEHPDLFKEYFGTVIPPGDNKFAALNTA 183
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PK V + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 184 VWSGGSFIYVPKNVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKS 243
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
LH+AVVE++ NA +Y+T+QNW +YN VTKR + + W
Sbjct: 244 ESLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVAY-EGATMEWIDGN 295
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A + Q D+G+KM+H A NT+S IVSK ++
Sbjct: 296 IGSQVTMKYPAVYLMGEHAKGETLSLAFAGEGQHQDTGSKMVHCAPNTSSTIVSKSVARS 355
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V GA S++ +CD+LLI + T PY++ + + HEAT SK+
Sbjct: 356 GGRASYRGLVQVQEGAERSKSTVKCDALLIDTISRSDTYPYVDVREDDVEMGHEATVSKV 415
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 416 SEDQLFYLMSRGLDEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 470
>gi|315320530|ref|YP_004072586.1| FeS cluster assembly protein SufB [Thalassiosira oceanica CCMP1005]
gi|283569003|gb|ADB27540.1| FeS cluster assembly protein SufB [Thalassiosira oceanica CCMP1005]
Length = 485
Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats.
Identities = 299/490 (61%), Positives = 384/490 (78%), Gaps = 6/490 (1%)
Query: 1 MVAVRETVDK-VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M +T++ + K+ YKYGF T I+ D KGLNE IIR +S KKNEP ++LE+RL
Sbjct: 1 MNQSNKTLNNNITKLVNQPYKYGFSTTIEKDIIEKGLNEKIIRLLSKKKNEPQFLLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY++W M P WA++++ ID+ D+ YY+APK+ SLD+VDPELL T++KLGI +
Sbjct: 61 KAYKKWKQMTCPEWAQLKFSEIDYQDIIYYSAPKTKKKLNSLDEVDPELLETFDKLGITL 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L + VAVD VFDSVS+ TTFK+EL + GVIF ISEAI ++ +LV+KYL T
Sbjct: 121 SEQKRL-----TNVAVDVVFDSVSIATTFKQELAEYGVIFSSISEAIHDYEELVEKYLGT 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+GDN+++ALNSAVFTDGSF YIPK + CP++LSTYFRIN++ +GQFERTLI+A+E S
Sbjct: 176 VVPIGDNYFSALNSAVFTDGSFCYIPKDIICPLDLSTYFRINDENSGQFERTLIVAEENS 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAPQ D NQLHAA+VEL+AL+NA IKYSTVQNWY GD +G+GG+YNFVTKRG
Sbjct: 236 QVSYLEGCTAPQYDNNQLHAAIVELIALNNASIKYSTVQNWYSGDEKGQGGVYNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G SKISWTQ+ETGS+ITWKYPSCLL GE + GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 296 LCSGTASKISWTQVETGSSITWKYPSCLLVGENTQGEFYSVALTNNYQQADTGTKMIHIG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KN+ SRIVSKGISAG S NTYRG V++++ A +RN++QCDSLLIGN ++T P+I +
Sbjct: 356 KNSRSRIVSKGISAGNSKNTYRGFVNINKKAIGARNYSQCDSLLIGNLSNSNTFPFISVQ 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NSS +EHEA+TSKI +E +FY LQRGI E I L+++GF REV +LP+EFA EA +L
Sbjct: 416 NSSTKIEHEASTSKIGEEQIFYFLQRGISIEKGIELMISGFCREVFTELPLEFASEADRL 475
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 476 LSLKLEGSVG 485
>gi|126438990|ref|YP_001059727.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 668]
gi|134277425|ref|ZP_01764140.1| FeS assembly protein SufB [Burkholderia pseudomallei 305]
gi|167739466|ref|ZP_02412240.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 14]
gi|217421092|ref|ZP_03452597.1| FeS assembly protein SufB [Burkholderia pseudomallei 576]
gi|254184278|ref|ZP_04890868.1| FeS assembly protein SufB [Burkholderia pseudomallei 1655]
gi|254191312|ref|ZP_04897816.1| FeS assembly protein SufB [Burkholderia pseudomallei Pasteur 52237]
gi|126218483|gb|ABN81989.1| FeS assembly protein SufB [Burkholderia pseudomallei 668]
gi|134251075|gb|EBA51154.1| FeS assembly protein SufB [Burkholderia pseudomallei 305]
gi|157938984|gb|EDO94654.1| FeS assembly protein SufB [Burkholderia pseudomallei Pasteur 52237]
gi|184214809|gb|EDU11852.1| FeS assembly protein SufB [Burkholderia pseudomallei 1655]
gi|217396504|gb|EEC36521.1| FeS assembly protein SufB [Burkholderia pseudomallei 576]
Length = 484
Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 376/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|242059125|ref|XP_002458708.1| hypothetical protein SORBIDRAFT_03g038740 [Sorghum bicolor]
gi|241930683|gb|EES03828.1| hypothetical protein SORBIDRAFT_03g038740 [Sorghum bicolor]
Length = 542
Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats.
Identities = 286/479 (59%), Positives = 358/479 (74%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
++K+ +YKYGF ++ + PKGL+E +R IS K EP WML++RL AYRR+LTM +
Sbjct: 69 LQKLLKREYKYGFVSDFESFSIPKGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMVE 128
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+W+ Y +D + YY+APK+ SLD+VDPELL+T+++LGIP+ EQ+ L
Sbjct: 129 PTWSDNEYAPVDLQSICYYSAPKTKPKLNSLDEVDPELLKTFDRLGIPLTEQKRL----- 183
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+ VAVDAV DS S+ TT +E L GVIF ISEAI E+PDLV++YL +VVP GDN+YAA
Sbjct: 184 TNVAVDAVIDSTSIATTHREALMAKGVIFCSISEAIREYPDLVRRYLGSVVPPGDNYYAA 243
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSF Y+PK CPME+STYFRIN+K TGQFERTLI+ADE S VSYLEGCTAP
Sbjct: 244 LNSAVFSDGSFCYVPKDTVCPMEISTYFRINDKETGQFERTLIVADERSTVSYLEGCTAP 303
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVELV + AEIKYSTVQNWY GD +GKGGIYNFVTKRG C+G SKISW
Sbjct: 304 AYDSNQLHAAVVELVCEEGAEIKYSTVQNWYSGDEEGKGGIYNFVTKRGRCKGRGSKISW 363
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPS L G+ S GEFYS+A++ QQ D+GTKM+H KN+ SRI+SKG
Sbjct: 364 TQVETGSAITWKYPSVELVGDDSVGEFYSVALTKDCQQADTGTKMIHKGKNSRSRIISKG 423
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N YRG V ++ A ++ N +QCDSLLIG+N A+T P I+ +S +EHEA+
Sbjct: 424 ISAGKSRNCYRGLVLMNSSAENAYNSSQCDSLLIGDNAAANTYPTIQVGCTSGRVEHEAS 483
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFY QRG+ E A+A ++ GF R V + LP EFA E L+++ LEGSVG
Sbjct: 484 TSKIGEDQLFYFQQRGVDHEKAVAAMIGGFCRSVFEHLPYEFAQEVDALMNLKLEGSVG 542
>gi|108799403|ref|YP_639600.1| FeS assembly protein SufB [Mycobacterium sp. MCS]
gi|119868516|ref|YP_938468.1| FeS assembly protein SufB [Mycobacterium sp. KMS]
gi|126435056|ref|YP_001070747.1| FeS assembly protein SufB [Mycobacterium sp. JLS]
gi|108769822|gb|ABG08544.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. MCS]
gi|119694605|gb|ABL91678.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. KMS]
gi|126234856|gb|ABN98256.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. JLS]
Length = 487
Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats.
Identities = 197/475 (41%), Positives = 293/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEP+WML+ RL A R + P+W
Sbjct: 29 LGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEPEWMLDIRLRALRTFDKKPMPNWG 88
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY+KLGIP E++ L
Sbjct: 89 S-NLEGIDFDNIKYFVRSSEKQAAT-WDDLPADIKNTYDKLGIPEAEKQRLV------SG 140
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V + +E+L+ GVIF+ A+ EHPDL K+Y TV+P GDN ++ALN+A
Sbjct: 141 VAAQYESEVVYHSIREDLEAQGVIFLDTDTALKEHPDLFKQYFGTVIPAGDNKFSALNTA 200
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 201 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKS 260
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 261 DSLHSAVVEIIVKPGGRCRYTTIQNW-------SNNVYNLVTKRARAEA-GATMEWVDGN 312
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA T+S IVSK ++ G
Sbjct: 313 IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPQTSSNIVSKSVARG 372
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 373 GGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 432
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 433 SEDQLFYLMSRGMTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 487
>gi|296129517|ref|YP_003636767.1| FeS assembly protein SufB [Cellulomonas flavigena DSM 20109]
gi|296021332|gb|ADG74568.1| FeS assembly protein SufB [Cellulomonas flavigena DSM 20109]
Length = 485
Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats.
Identities = 196/490 (40%), Positives = 294/490 (60%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
A E + + I + Y +G+ ++ A +GL+ED++R IS KNEP+WML+ RL
Sbjct: 12 PAATEPLSQDEAIASIGNYTFGWHDPDVAGASARRGLSEDVVRDISRLKNEPEWMLKMRL 71
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A R + P W IDFD++ Y+ +D+ ++ TY++LGIP
Sbjct: 72 KALRLFDKKPMPWWG-ADLSGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDRLGIPE 129
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E L++ GVIF+ A+ EHP++ ++Y +
Sbjct: 130 AEKQRLV------AGVAAQYESEVVYHQIQESLEEQGVIFLDTDTALREHPEIFEQYFGS 183
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN +A+LN+AV++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGS
Sbjct: 184 VIPPGDNKFASLNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGS 243
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR
Sbjct: 244 YVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKR- 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H A
Sbjct: 296 ATAAEGATMEWVDGNIGSKVTMKYPAIYLMGEHARGETLSIAFAGEGQHQDAGSKMVHAA 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK ++ G +YRG V + GA HS + CD+LL+ + T PY++ +
Sbjct: 356 PHTSSSIVSKSVARGGGRTSYRGLVQILEGAEHSASNVLCDALLVDQISRSDTYPYVDVR 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT S++S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 416 EDDVSMGHEATVSRVSEDQLFYLMSRGMTETEAMAMIVRGFVEPIARELPMEYALELNRL 475
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 476 IELQMEGAVG 485
>gi|261408749|ref|YP_003244990.1| FeS assembly protein SufB [Paenibacillus sp. Y412MC10]
gi|261285212|gb|ACX67183.1| FeS assembly protein SufB [Paenibacillus sp. Y412MC10]
Length = 465
Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats.
Identities = 213/476 (44%), Positives = 300/476 (63%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF + + + KGL +++ IS KNEP+WMLE+RL A ++ M P W
Sbjct: 7 EMEEYKYGFRDEHKAIFQTGKGLTREVVTEISKIKNEPEWMLEFRLKALEQFEKMPMPRW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLDELDFNDIQYYVRPSEKQG-KTWEEVPAEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +++L+ GVIFM A+ EHP+++K+Y +TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMQKDLEDQGVIFMDTDTALREHPEILKEYFATVVPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVQCEIPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA ++Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIICKKNARVRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KMLHLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVLKGRGAKGMVLSIAVAGKGQHQDAGAKMLHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R A ++ +CD+L++ N + TIPY E KN + LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRNAEGAKANIKCDTLILDNESTSDTIPYNEIKNDNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGLTEDEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|329930488|ref|ZP_08284028.1| FeS assembly protein SufB [Paenibacillus sp. HGF5]
gi|328934866|gb|EGG31356.1| FeS assembly protein SufB [Paenibacillus sp. HGF5]
Length = 465
Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats.
Identities = 214/476 (44%), Positives = 299/476 (62%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF + + + KGL +++ IS KNEP+WMLE+RL + ++ M P W
Sbjct: 7 EMEEYKYGFRDEHKAIFQTGKGLTREVVTEISKIKNEPEWMLEFRLKSLEQFEKMPMPRW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLDELDFNDIQYYVRPSEKQG-KTWEEVPAEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +++L+ GVIFM A+ EHP+++K+Y +TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMQKDLEDQGVIFMDTDTALREHPEILKEYFATVVPPADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEIPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA ++Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIICKKNARVRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KMLHLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVLKGRGAKGSVLSIAVAGKGQHQDAGAKMLHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R A ++ QCD+L++ N + TIPY E KN + LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRNAEGAKANIQCDTLILDNESTSDTIPYNEIKNDNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGLSESEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|308068316|ref|YP_003869921.1| hypothetical protein PPE_01544 [Paenibacillus polymyxa E681]
gi|305857595|gb|ADM69383.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 465
Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats.
Identities = 212/476 (44%), Positives = 301/476 (63%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF + + KGL +I++ IS K+EP+WMLE+RL A +++ M P+W
Sbjct: 7 EMEEYKYGFRDEHKSIFQTGKGLTPEIVKEISKIKDEPEWMLEFRLKALKQFEKMPMPNW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DMDELDFNDIQYYVRPSEKQG-KTWEEVPTEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + ++EL+ GVIFM A+ EHP+++K+Y +TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMQKELEDQGVIFMDTDTALREHPEILKEYFATVVPPADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEVPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA ++Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIICKKNARVRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KM+HLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVLKGRGAKGMVLSIAVAGKGQHQDAGAKMIHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R A +++ +CD+L++ N + TIPY E N LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRQAQGAKSNIKCDTLILDNQSTSDTIPYNEIMNDDITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGLTEAEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|11467678|ref|NP_050730.1| putative ABC transporter [Guillardia theta]
gi|6136610|sp|O78473|YCF24_GUITH RecName: Full=UPF0051 protein ycf24
gi|3603003|gb|AAC35664.1| ABC transporter [Guillardia theta]
Length = 483
Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats.
Identities = 295/479 (61%), Positives = 375/479 (78%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+R++ YKYGF T+I+ ++ PKGL+EDII+ IS K EP +ML++RL +Y W M
Sbjct: 10 LRELVSQPYKYGFHTDIENEEFPKGLDEDIIKEISKLKCEPSYMLDFRLKSYILWKKMSL 69
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA + Y I++ D+ YY+APK+ SL+DVD ++L T++KLGIP+ EQ+ LA
Sbjct: 70 PEWACLTYLNINYQDIVYYSAPKNSTKLDSLEDVDKKILETFDKLGIPLNEQKKLA---- 125
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDA+FDSVSV TTFK+EL GV+F P+SEA ++ LV+KYL +VVP+GDN++AA
Sbjct: 126 -NVAVDAIFDSVSVGTTFKQELSNVGVLFCPLSEATNKYSTLVEKYLGSVVPIGDNYFAA 184
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF++GSF YIP V+CP+ELSTYFRIN + +GQFERTLIIAD SYVSYLEGCTAP
Sbjct: 185 LNSAVFSEGSFCYIPPNVKCPLELSTYFRINNENSGQFERTLIIADFNSYVSYLEGCTAP 244
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D+NQLHAAVVEL+AL+NAEI+YSTVQNWY GD+ GKGGIYNFVTKRG C G SKISW
Sbjct: 245 MYDKNQLHAAVVELIALENAEIRYSTVQNWYSGDTNGKGGIYNFVTKRGLCAGKSSKISW 304
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L GE S GEFYS+A++N +QQ D+GTKM+H+ + + SRI+SKG
Sbjct: 305 TQVETGSAITWKYPSCILVGEDSVGEFYSVALTNNYQQADTGTKMIHVGRGSKSRIISKG 364
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG+S NTYRG+V ++ A S N +QCDS+LIG A+T PYI+ N+ +EHEA+
Sbjct: 365 ISAGYSKNTYRGQVKININALGSINNSQCDSMLIGPYSQANTYPYIQVSNAMSRVEHEAS 424
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI +E LFY LQRGI E AI+L+++GF R+V KLPMEFAVEA KL+ + LEG+VG
Sbjct: 425 TSKIEEEQLFYFLQRGISVEQAISLLISGFCRDVFVKLPMEFAVEADKLLSVKLEGTVG 483
>gi|254506027|ref|ZP_05118172.1| FeS assembly protein SufB [Vibrio parahaemolyticus 16]
gi|219551250|gb|EED28230.1| FeS assembly protein SufB [Vibrio parahaemolyticus 16]
Length = 487
Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats.
Identities = 286/495 (57%), Positives = 366/495 (73%), Gaps = 14/495 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV + YK GF T + D KG+NED++R ISAK++EP+WML++RL
Sbjct: 1 MCAVETQPEVEELFQTSHYKEGFYTQLSSDTLSKGINEDVVRAISAKRSEPEWMLQFRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD------VDPELLRTYEK 114
A+R+W M++P W + YP +D+ D YY+AP D + E+ +E+
Sbjct: 61 AFRKWQQMEEPHWLKAEYPELDYQDYSYYSAPSCASCDTGCSDDGSNEYLTKEVETAFEQ 120
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P+RE ++VAVDA+FDSVSV TT+K EL++ G+IF SEAI EHP+LV+
Sbjct: 121 LGVPVRE--------GAEVAVDAIFDSVSVTTTYKNELQELGIIFCSFSEAIQEHPELVQ 172
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+YL TVVP DNF+AALN+AV +DG+FVYIPKGVRCP ELSTYFRIN+ TGQFERT++I
Sbjct: 173 QYLGTVVPPEDNFFAALNAAVASDGTFVYIPKGVRCPRELSTYFRINQAKTGQFERTILI 232
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
ADE SYVSY+EGC+AP RD QLHAAVVE++ D AE+KYSTVQNW+ G+ +GGI NF
Sbjct: 233 ADEESYVSYIEGCSAPMRDSYQLHAAVVEVIIHDRAEVKYSTVQNWFSGEEDSQGGILNF 292
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ D+GTK
Sbjct: 293 VTKRAVCEGDHSKMSWTQSETGSAITWKYPSVILKGDYSVGEFFSVALTNGVQQADTGTK 352
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H+ K+T S I+SKGISAG S N+YRG V + A +RNFTQCDS+LIG CGAHT P
Sbjct: 353 MIHIGKHTRSTIISKGISAGKSENSYRGLVKILPNAEGARNFTQCDSMLIGTQCGAHTFP 412
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
YIE KN + +EHEATTS+I ++ LFYC+QRGI E+ AI++IVNGF ++V +LP+EFAV
Sbjct: 413 YIEVKNPTAQVEHEATTSRIGEDQLFYCVQRGISEDDAISMIVNGFCKDVFSELPLEFAV 472
Query: 475 EAQKLIDISLEGSVG 489
EAQKL+ ISLE SVG
Sbjct: 473 EAQKLLSISLEHSVG 487
>gi|167720476|ref|ZP_02403712.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei DM98]
gi|237813120|ref|YP_002897571.1| FeS assembly protein SufB [Burkholderia pseudomallei MSHR346]
gi|237505698|gb|ACQ98016.1| FeS assembly protein SufB [Burkholderia pseudomallei MSHR346]
Length = 484
Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats.
Identities = 307/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L +GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSF+Y+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFIYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|167895160|ref|ZP_02482562.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 7894]
gi|167919797|ref|ZP_02506888.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei BCC215]
gi|254195693|ref|ZP_04902119.1| FeS assembly protein SufB [Burkholderia pseudomallei S13]
gi|169652438|gb|EDS85131.1| FeS assembly protein SufB [Burkholderia pseudomallei S13]
Length = 484
Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L +GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|56421526|ref|YP_148844.1| hypothetical protein GK2991 [Geobacillus kaustophilus HTA426]
gi|261420429|ref|YP_003254111.1| FeS assembly protein SufB [Geobacillus sp. Y412MC61]
gi|297528870|ref|YP_003670145.1| FeS assembly protein SufB [Geobacillus sp. C56-T3]
gi|319768096|ref|YP_004133597.1| FeS assembly protein SufB [Geobacillus sp. Y412MC52]
gi|56381368|dbj|BAD77276.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|261376886|gb|ACX79629.1| FeS assembly protein SufB [Geobacillus sp. Y412MC61]
gi|297252122|gb|ADI25568.1| FeS assembly protein SufB [Geobacillus sp. C56-T3]
gi|317112962|gb|ADU95454.1| FeS assembly protein SufB [Geobacillus sp. Y412MC52]
Length = 465
Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats.
Identities = 213/476 (44%), Positives = 295/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ V +A +GL +++ IS KNEP WMLE+RL A + + P W
Sbjct: 7 EIGEYKYGFVDKDVSVFRAQRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++DFD++ YY P G +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSSLDFDEITYYVKPTEKSG-RSWDEVPAEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+K GVIF A+ E+ DL ++Y + VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEKLGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGAYCRYTTIQNWA-------NNVFNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A+ SR+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGMVHFGRKASGSRSNIECDTLILDNQSTSDTIPYNEILNDNVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|290961353|ref|YP_003492535.1| hypothetical protein SCAB_70031 [Streptomyces scabiei 87.22]
gi|260650879|emb|CBG73996.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 474
Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats.
Identities = 200/490 (40%), Positives = 297/490 (60%), Gaps = 17/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E + Y+YG+ ++++ A +G+NED++R ISAKKNEP+WM + RL
Sbjct: 1 MTLPIEETAHPELEGLGNYEYGWADSDVAGASAKRGINEDVVRDISAKKNEPEWMTKLRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 61 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 119 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 173 VIPVGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR
Sbjct: 233 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRA 285
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 286 VAY-EGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHMA 344
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG V + GA S++ CD+LL+ + T PY++ +
Sbjct: 345 PNTSSNIVSKSVARGGGRTSYRGLVEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDVR 404
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 405 EDDVSMGHEATVSKVSDDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 464
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 465 IELQMEGAVG 474
>gi|167903546|ref|ZP_02490751.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei NCTC 13177]
Length = 484
Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L +GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLATAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|294628715|ref|ZP_06707275.1| FeS assembly protein SufB [Streptomyces sp. e14]
gi|292832048|gb|EFF90397.1| FeS assembly protein SufB [Streptomyces sp. e14]
Length = 473
Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats.
Identities = 202/490 (41%), Positives = 300/490 (61%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ +++ A +GLNE+++R ISAKK+EP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADSDEAGASAKRGLNEEVVRDISAKKSEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHPDL K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPDLFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 172 VIPVGDNKFASLNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 285 VAY-EGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG V + GAA S++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLVEIGEGAAGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|213965595|ref|ZP_03393789.1| FeS assembly protein SufB [Corynebacterium amycolatum SK46]
gi|213951754|gb|EEB63142.1| FeS assembly protein SufB [Corynebacterium amycolatum SK46]
Length = 488
Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats.
Identities = 199/489 (40%), Positives = 297/489 (60%), Gaps = 18/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
A +T +++ + + Y++G+ + A +GL+E ++R ISAKKNEP+WMLE RL
Sbjct: 17 AATPQTDEEIIE-SIGAYQFGWHDPDTAGASAKRGLSEAVVRDISAKKNEPEWMLERRLK 75
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + P+W IDFD++ Y+ Q+ +D+ ++ TY+KLGIP
Sbjct: 76 ALEIFDRKPLPTWG-ADLSGIDFDNIKYFVRSTEKQA-QTWEDLPEDIKNTYDKLGIPEA 133
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V +E+L+ GVIF+ A+ EHP+L K+Y TV
Sbjct: 134 EKQRLV------AGVAAQYESEVVYHQIREDLESQGVIFLDTDTALKEHPELFKEYFGTV 187
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +Y
Sbjct: 188 IPSGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY 247
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 248 VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRTK 300
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C + + W GS +T KYP+ + G + GE S+A++ Q D+G KM+H+A
Sbjct: 301 C-EEGATMEWIDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAMAGEGQFQDTGAKMVHMAP 359
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T+S IVSK ++ YRG V V++GA HS + +CD+LL+ + T PY++ +
Sbjct: 360 HTSSNIVSKSVARNGGRAAYRGLVQVNKGAKHSHSNVECDALLVDTISRSDTYPYVDVRE 419
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
L HEAT SK+SD+ LFY + RGI EE A+A++V GFV + ++LPME+A+E +LI
Sbjct: 420 DDVTLGHEATVSKVSDDQLFYLMSRGIEEEDAMAMVVRGFVEPIAKELPMEYALELNRLI 479
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 480 ELQMEGSVG 488
>gi|226507050|ref|NP_001143087.1| hypothetical protein LOC100275561 [Zea mays]
gi|195614064|gb|ACG28862.1| hypothetical protein [Zea mays]
Length = 540
Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats.
Identities = 284/479 (59%), Positives = 358/479 (74%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
++K+ +YKYGF ++ + PKGL+E +R IS K EP WML++RL AYRR+LTM +
Sbjct: 67 LQKLLKREYKYGFVSDFESFSIPKGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMVE 126
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P+W+ Y +D + YY+APK+ SLD+VDPELL+T+++LGIP+ EQ+ L+
Sbjct: 127 PTWSDNEYAPVDLQSICYYSAPKTKPKLNSLDEVDPELLKTFDRLGIPLTEQKRLS---- 182
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDAV DS S+ TT +E L GVIF ISEAI E+PDL+++YL +VVP GDN+YAA
Sbjct: 183 -NVAVDAVIDSTSIATTHREALMAKGVIFCSISEAIREYPDLIRRYLGSVVPPGDNYYAA 241
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSF ++PK CPME+STYFRIN+K TGQFERTLI+ADE S VSYLEGCTAP
Sbjct: 242 LNSAVFSDGSFCFVPKDTVCPMEISTYFRINDKETGQFERTLIVADERSTVSYLEGCTAP 301
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D NQLHAAVVELV + AEIKYSTVQNWY GD +GKGGIYNFVTKRG C+G SKISW
Sbjct: 302 AYDSNQLHAAVVELVCEEGAEIKYSTVQNWYSGDEEGKGGIYNFVTKRGRCKGHGSKISW 361
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPS L G+ S GEFYS+A++ QQ D+GTKM+H KN+ SRI+SKG
Sbjct: 362 TQVETGSAITWKYPSVELIGDDSVGEFYSVALTKDCQQADTGTKMIHKGKNSRSRIISKG 421
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N YRG V ++ A ++ N +QCDSLLIG+N A+T P I+ +S +EHEA+
Sbjct: 422 ISAGKSRNCYRGLVLMNPSAENAYNSSQCDSLLIGDNAAANTYPTIQVGCTSGRVEHEAS 481
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI ++ LFY QRG+ E A+A ++ GF R V + LP EFA E L+++ LEGSVG
Sbjct: 482 TSKIGEDQLFYFQQRGVDHEKAVAAMIGGFCRSVFEHLPYEFAQEVDALMNLKLEGSVG 540
>gi|256379161|ref|YP_003102821.1| FeS assembly protein SufB [Actinosynnema mirum DSM 43827]
gi|255923464|gb|ACU38975.1| FeS assembly protein SufB [Actinosynnema mirum DSM 43827]
Length = 481
Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats.
Identities = 199/497 (40%), Positives = 298/497 (59%), Gaps = 24/497 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ-------YKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPD 52
M A E + ++ Y++G+ ++++ A +GLNED++R IS KKNEP+
Sbjct: 1 MTAAAEQRTTTVPLTQEETLASIGNYEFGWADSDVAGASARRGLNEDVVRDISGKKNEPE 60
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
WMLE+RL A R + PSW IDFD++ Y+ +D+ E+ TY
Sbjct: 61 WMLEYRLKALRLFDRKPMPSWGS-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEEIKNTY 118
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++LGIP E++ L V A ++S V +E+L++ GVIF+ + EHP+L
Sbjct: 119 DRLGIPEAEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTGLKEHPEL 172
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
K+Y +V+P GDN ++ALNSA ++ GSF+Y+PKGV + L YFRIN + GQFERTL
Sbjct: 173 FKEYFGSVIPAGDNKFSALNSATWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTL 232
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II DE +YV Y+EGCTAP + LH+AVVE+V +Y+T+QNW +Y
Sbjct: 233 IIVDEDAYVHYVEGCTAPIYSSDSLHSAVVEIVVKKGGRCRYTTIQNW-------SNNVY 285
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N VTKR + + W GS +T KYP+ L GE + GE SIA + Q D+G
Sbjct: 286 NLVTKRAKAEA-GATMEWVDGNIGSKVTMKYPAVYLMGEHAKGEVLSIAFAGEGQHQDTG 344
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
KM+H+A +T+S IVSK ++ G +YRG V V++ A HS++ +CD+LL+ + T
Sbjct: 345 AKMVHMAPHTSSTIVSKSVARGGGRASYRGLVQVNKRAHHSKSTVKCDALLVDTISRSDT 404
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY++ + + HEAT SK+S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+
Sbjct: 405 YPYVDVREDDVAMGHEATVSKVSEDQLFYLMSRGLNEDEAMAMIVRGFVEPIARELPMEY 464
Query: 473 AVEAQKLIDISLEGSVG 489
A+E +LI++ +EG+VG
Sbjct: 465 ALELNRLIELQMEGAVG 481
>gi|329940798|ref|ZP_08290078.1| Iron-sulfur assembly protein SufB [Streptomyces griseoaurantiacus
M045]
gi|329300092|gb|EGG43990.1| Iron-sulfur assembly protein SufB [Streptomyces griseoaurantiacus
M045]
Length = 473
Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats.
Identities = 201/490 (41%), Positives = 299/490 (61%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ +++ A +G+NED++R ISAKK+EP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADSDTAGASAKRGINEDVVRDISAKKSEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|167816670|ref|ZP_02448350.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 91]
Length = 484
Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E I+R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGIVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+V YLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|289705316|ref|ZP_06501713.1| FeS assembly protein SufB [Micrococcus luteus SK58]
gi|289705463|ref|ZP_06501855.1| FeS assembly protein SufB [Micrococcus luteus SK58]
gi|289557692|gb|EFD50991.1| FeS assembly protein SufB [Micrococcus luteus SK58]
gi|289557951|gb|EFD51245.1| FeS assembly protein SufB [Micrococcus luteus SK58]
Length = 490
Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats.
Identities = 204/488 (41%), Positives = 303/488 (62%), Gaps = 18/488 (3%)
Query: 4 VRETVDKVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
++E +DK +++ + Y+YG+ +++ +KA +GLNED++R IS KK+EP+WM + RL A
Sbjct: 19 IQEILDKNPELNAIGAYQYGWADSDAAGEKAVRGLNEDVVRDISGKKDEPEWMRDLRLKA 78
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+W IDFD++ Y+ ++ +D+ ++ TYE+LGIP E
Sbjct: 79 LKYFERKPMPAWGP-DLSGIDFDNIKYFVRSTEGQA-KTWEDLPEDIRNTYERLGIPEAE 136
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L V A ++S V +E+L++ GV+F+ A+ EHP++ ++Y TV+
Sbjct: 137 RERLV------AGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALKEHPEIFEEYFGTVI 190
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PVGDN +A+LN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE SYV
Sbjct: 191 PVGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYV 250
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+AVVE+V NA ++Y+T+QNW +YN VTKR
Sbjct: 251 HYIEGCTAPIYQSDSLHSAVVEIVVKKNARVRYTTIQNW-------STNVYNLVTKRAVV 303
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ W GS +T KYP+ L GE + GE S+A + Q D+G+KM+H+A +
Sbjct: 304 EA-GGTMEWIDGNIGSKVTMKYPAVYLTGEHATGETLSVAFAGKDQHQDTGSKMVHMAPH 362
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSK ++ YRG V + GA S N CD+LL+ + T PYI+ +
Sbjct: 363 TNSSIVSKSVARSGGRAAYRGLVQIAEGANGSANSVVCDALLVDTVSRSDTYPYIDIRED 422
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
L HEAT SK+S+E LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E KLI+
Sbjct: 423 DVTLGHEATVSKVSEEQLFYLMSRGMSEDEAMAMIVRGFIEPIARELPMEYALELNKLIE 482
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 483 LQMEGSVG 490
>gi|257055643|ref|YP_003133475.1| Iron-regulated ABC transporter membrane component SufB
[Saccharomonospora viridis DSM 43017]
gi|256585515|gb|ACU96648.1| Iron-regulated ABC transporter membrane component SufB
[Saccharomonospora viridis DSM 43017]
Length = 482
Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats.
Identities = 201/486 (41%), Positives = 297/486 (61%), Gaps = 22/486 (4%)
Query: 5 RETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
ET++ + +Y +G+ + A +GLNE+++R ISAKK+EPDWMLE RL A +
Sbjct: 18 EETIESL-----GKYAFGWADPDPAGASARRGLNEEVVRDISAKKSEPDWMLETRLKALK 72
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W IDFD++ Y+ D++ P++ TY+KLGIP E++
Sbjct: 73 LFERKPMPNWG-ADLSGIDFDNIKYFVRSTEKQATS-WDELPPDIKNTYDKLGIPEAEKQ 130
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V +E+L+K GVIF+ + EHP+L K+Y +V+P
Sbjct: 131 RLI------AGVAAQYESEVVYHQIREDLEKQGVIFLDTDTGLKEHPELFKEYFGSVIPA 184
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+YV Y
Sbjct: 185 GDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYVHY 244
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR
Sbjct: 245 VEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRAKA-E 296
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + W GS +T KYPS L GE + GE S+A + Q D+G KM HLA NT+
Sbjct: 297 EGATMEWIDGNIGSKVTMKYPSVFLMGEHAKGEVLSVAFAGEGQHQDAGAKMEHLAPNTS 356
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSK ++ G +YRG V V + A +S++ +CD+LL+ + T PY++ +N
Sbjct: 357 STIVSKSVARGGGRTSYRGLVRVAKRAHNSKSNVECDALLVDTISRSDTYPYVDIRNDEV 416
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEAT SK+S++ LFY + RG+ EE A+A++V GFV + ++LPME+A+E +LI++
Sbjct: 417 SMGHEATVSKVSEDQLFYLMSRGLSEEEAMAMVVRGFVEPIARELPMEYALELNRLIELQ 476
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 477 MEGSVG 482
>gi|167825073|ref|ZP_02456544.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 9]
gi|226199894|ref|ZP_03795444.1| FeS assembly protein SufB [Burkholderia pseudomallei Pakistan 9]
gi|225927950|gb|EEH23987.1| FeS assembly protein SufB [Burkholderia pseudomallei Pakistan 9]
Length = 484
Score = 515 bits (1325), Expect = e-143, Method: Composition-based stats.
Identities = 308/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDRPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L +GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+VSYLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVSYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|162210054|ref|YP_334206.2| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 1710b]
gi|167911795|ref|ZP_02498886.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 112]
gi|254259106|ref|ZP_04950160.1| FeS assembly protein SufB [Burkholderia pseudomallei 1710a]
gi|254217795|gb|EET07179.1| FeS assembly protein SufB [Burkholderia pseudomallei 1710a]
Length = 484
Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats.
Identities = 307/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+V YLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|76580141|gb|ABA49616.1| FeS assembly protein SufB [Burkholderia pseudomallei 1710b]
Length = 675
Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats.
Identities = 307/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 207 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 266
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 267 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 321
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 322 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 381
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+V YLEGCTAPQRDE+
Sbjct: 382 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLEGCTAPQRDEH 441
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 442 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 501
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 502 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 561
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 562 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 621
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 622 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 675
>gi|289642756|ref|ZP_06474894.1| FeS assembly protein SufB [Frankia symbiont of Datisca glomerata]
gi|289507409|gb|EFD28370.1| FeS assembly protein SufB [Frankia symbiont of Datisca glomerata]
Length = 474
Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats.
Identities = 198/490 (40%), Positives = 296/490 (60%), Gaps = 17/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET R + YK+G+ +T+ A +GL+E ++ ISAKK+EP+WM + RL
Sbjct: 1 MTTTPETEIDSRLEGLGSYKFGWSDTDAYAATAERGLSEAVVLGISAKKSEPEWMTQLRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +S DD+ ++ TY+KLGIP
Sbjct: 61 KGLKLFGRKPMPTWG-ADLSGIDFDNIKYFVRSTEKQA-ESWDDLPADIRNTYDKLGIPE 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ + EHP++ ++Y +
Sbjct: 119 AEKQRLV------SGVAAQYESEVVYHKIREDLEEQGVIFLDTDTGLREHPEIFQEYFGS 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 173 VIPVGDNKFAALNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V NA +Y+T+QNW +YN VTKR
Sbjct: 233 YVHYVEGCTAPIYSSDSLHSAVVEIVVKKNARCRYTTIQNW-------SNNVYNLVTKRA 285
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+ + W GS +T KYP+ L GEQ+ GE SIA + Q D+G KM+H A
Sbjct: 286 ACQA-GGTMEWIDGNIGSKVTMKYPAVWLLGEQAKGEVLSIAFAGAGQHQDAGAKMVHAA 344
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S IVSK ++ G +YRG V + GA +SR +CD+LL+ + T PY++ +
Sbjct: 345 PRTSSTIVSKSVARGGGRTSYRGLVQIQEGAHNSRATVKCDALLVDTVSRSDTYPYVDVR 404
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+ ++ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +L
Sbjct: 405 EDDASIGHEATVSKVGEDQLFYLMSRGLSEDEAMAMVVRGFVEPIARELPMEYALELNRL 464
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 465 IELQMEGAVG 474
>gi|239931982|ref|ZP_04688935.1| hypothetical protein SghaA1_27419 [Streptomyces ghanaensis ATCC
14672]
gi|291440352|ref|ZP_06579742.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
gi|291343247|gb|EFE70203.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
Length = 473
Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats.
Identities = 199/490 (40%), Positives = 297/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ + A +G++ED++R ISAKK+EP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADRDDAGASARRGVDEDVVRDISAKKDEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+
Sbjct: 172 VIPAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLSEDEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|53719976|ref|YP_108962.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei K96243]
gi|52210390|emb|CAH36371.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
Length = 484
Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats.
Identities = 307/474 (64%), Positives = 375/474 (79%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+V YLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDLLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|317505957|ref|ZP_07963789.1| FeS assembly protein SufB [Segniliparus rugosus ATCC BAA-974]
gi|316255733|gb|EFV14971.1| FeS assembly protein SufB [Segniliparus rugosus ATCC BAA-974]
Length = 523
Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats.
Identities = 190/475 (40%), Positives = 290/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ ++ A +GL+E+++ ISAKK EP+WML+ RL A + PSW
Sbjct: 65 LGNYDYGWADADVAGASARRGLSEEVVADISAKKGEPEWMLQARLKALAIFNRKPMPSWG 124
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY+KLGIP E++ L
Sbjct: 125 G-DLSGIDFDNIKYFVRSTEKQAAT-WDDLPADIKSTYDKLGIPEAEKKRLV------AG 176
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GV+F+ A+ EHPD+ +++ TV+P GDN ++ALN+A
Sbjct: 177 VAAQYESEVVYHQIREDLEQQGVVFLDTDTALREHPDVFREHFGTVIPAGDNKFSALNTA 236
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GS++Y+PKGV+ + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 237 VWSGGSYIYVPKGVQVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKS 296
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 297 DSLHSAVVEIIVKPGGRCRYTTIQNW-------SNNVYNLVTKRARA-ESGATMEWIDGN 348
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A + Q D+G+KMLHLA T+S IVSK ++ G
Sbjct: 349 IGSKVTMKYPAVWLTGEHAKGEVLSLAFAGPDQHQDTGSKMLHLAPRTSSNIVSKSVARG 408
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V VH+GA S+ +CD+LL+ + + T PY++ + + HEAT SK+
Sbjct: 409 GGRTSYRGLVGVHKGAVGSKATVRCDALLVDDVSRSDTYPYVDIREDDVTMGHEATVSKV 468
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A++V GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 469 SEDQLFYLMSRGMTEDEAMAMVVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 523
>gi|261749667|ref|YP_003257353.1| cysteine desulfurase activator complex subunit SufB
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
gi|261497760|gb|ACX84210.1| cysteine desulfurase activator complex subunit SufB
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
Length = 480
Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats.
Identities = 305/486 (62%), Positives = 379/486 (77%), Gaps = 6/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++E + +YKYGF T I+ DK P GL+E++I+ IS KK EP WML+WRL AY
Sbjct: 1 MKENNKILESFTSSEYKYGFYTPIESDKIPVGLSENVIQKISEKKEEPTWMLDWRLEAYS 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W MK+P+WA I+Y ++ ++ YY+APK + LD VDPELL T+ KLGIP++E++
Sbjct: 61 IWKKMKEPTWANIKYDQPNYQEISYYSAPKKKINLNDLDQVDPELLDTFNKLGIPLKEKK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
S++A D V DSVS+ TTF+E+LK G++F IS+A+ ++PD+VKKYL +VV
Sbjct: 121 -----HVSEIATDIVLDSVSLATTFQEKLKGQGILFCSISDALKKYPDIVKKYLGSVVSR 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNFYAALNSAVF+DGSF YIPKG+RCPMELSTYFRINE TGQFERTLIIAD+GS+VSY
Sbjct: 176 KDNFYAALNSAVFSDGSFCYIPKGIRCPMELSTYFRINENKTGQFERTLIIADKGSFVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQR ENQLHAAVVE+VAL+ +EIKYSTVQNW+PGD +G+GG++NFVTKRG C
Sbjct: 236 LEGCTAPQRSENQLHAAVVEIVALEKSEIKYSTVQNWFPGDKKGQGGVFNFVTKRGLCEE 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+KISW Q+ETGS+ITWKYPSC+L+G+ S GEFYS+A++ FQQ D+GTKM+HL K T
Sbjct: 296 R-AKISWIQVETGSSITWKYPSCVLKGDFSIGEFYSLALTKDFQQADTGTKMIHLGKKTK 354
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG + N YRG V + A SRNF+QCDSLLIGN CGAHT PYI NS+
Sbjct: 355 SVIISKGISAGKAQNNYRGLVKISPKAVKSRNFSQCDSLLIGNECGAHTFPYINVYNSTS 414
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI + LFYC QRGI E AI LIV+GF E+L+KLPMEFAVEAQ+L+++S
Sbjct: 415 QVEHEATTSKIGKDQLFYCNQRGIDTEKAIFLIVHGFSSEILKKLPMEFAVEAQQLLEVS 474
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 475 LEGSVG 480
>gi|258652486|ref|YP_003201642.1| FeS assembly protein SufB [Nakamurella multipartita DSM 44233]
gi|258555711|gb|ACV78653.1| FeS assembly protein SufB [Nakamurella multipartita DSM 44233]
Length = 481
Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats.
Identities = 199/497 (40%), Positives = 296/497 (59%), Gaps = 24/497 (4%)
Query: 1 MVAVRET------VDKVRKID-VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPD 52
M +E +++ ID + +Y +G+ + A +GLNED++R ISAKK+EP+
Sbjct: 1 MTTTQEPELSQARIEQAATIDQLGRYAFGWSDSDSAGATARRGLNEDVVRDISAKKSEPE 60
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
WML+ RL A + P+W IDFD++ Y+ +D+ ++ TY
Sbjct: 61 WMLQRRLKALELFGRQPMPTWG-ADLSGIDFDNIKYFVRSTEKQAAS-WEDLPDDIKNTY 118
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++LGIP E++ L V A ++S V +E+L++ GVIF+ + EHP++
Sbjct: 119 DRLGIPEAEKQRLV------SGVAAQYESEVVYHQIQEDLERQGVIFLDTDSGLREHPEI 172
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
+KY +V+P GDN ++ALN+AV++ GSFVY+P GV + L YFRIN + GQFERTL
Sbjct: 173 FEKYFGSVIPSGDNKFSALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTL 232
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II DE +YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +Y
Sbjct: 233 IIVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVY 285
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N VTKR + + W GS +T KYPS L GE + GE SIA + Q D+G
Sbjct: 286 NLVTKRAKAEA-GATMEWVDGNIGSKVTMKYPSVWLMGEHAKGEVLSIAFAGEGQHQDTG 344
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
KMLHLA +T+S I+SK +S G +YRG V V+ G HSR+ +CD+LL+ T
Sbjct: 345 AKMLHLAPHTSSTIISKSVSRGGGRTSYRGLVQVNPGNHHSRSTVKCDALLVDTLSRTDT 404
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY++ + ++ HEAT SKIS++ LFY + RG+ E+ A+A+IV GFV + ++LPME+
Sbjct: 405 YPYVDVREDDVSMGHEATVSKISEDQLFYLMSRGLTEDEAMAMIVRGFVEPIARELPMEY 464
Query: 473 AVEAQKLIDISLEGSVG 489
A+E +LI++ +EG+VG
Sbjct: 465 ALELNRLIELQMEGAVG 481
>gi|225021395|ref|ZP_03710587.1| hypothetical protein CORMATOL_01414 [Corynebacterium matruchotii
ATCC 33806]
gi|305681437|ref|ZP_07404244.1| FeS assembly protein SufB [Corynebacterium matruchotii ATCC 14266]
gi|224945777|gb|EEG26986.1| hypothetical protein CORMATOL_01414 [Corynebacterium matruchotii
ATCC 33806]
gi|305659642|gb|EFM49142.1| FeS assembly protein SufB [Corynebacterium matruchotii ATCC 14266]
Length = 472
Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats.
Identities = 199/490 (40%), Positives = 295/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + + I Y YG+ + KA +GL+E+++R ISAKKNEP+WMLE RL
Sbjct: 1 MTQPATDDEIIESI--GPYNYGWHDSDEAGQKARRGLSEEVVRDISAKKNEPEWMLEHRL 58
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + P+W IDFD++ Y+ +S +++ ++ TY++LGIP
Sbjct: 59 KALSLFEKKPLPTWG-ADLSEIDFDNIKYFVRSTEKQA-ESWEELPEDIKHTYDRLGIPE 116
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHPDLV++Y T
Sbjct: 117 AEKQRLV------AGVAAQYESEVVYHQIREDLERQGVIFLDTDTALKEHPDLVQEYFGT 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++P GDN +AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 171 IIPPGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 231 YVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRT 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS ++ KYP+ + G + GE S+A + Q D+G KM+H+A
Sbjct: 284 KC-EEGATMEWVDGNIGSKVSMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK ++ G YRG V ++ A HS + +CD+LL+ + T PY + +
Sbjct: 343 PHTSSNIVSKSVARGGGRAAYRGLVRINANAHHSTSNVECDALLVDSISRTDTYPYNDIR 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N +L HEAT S++S+E LFY + RGI E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 403 NDHVSLGHEATVSQVSEEQLFYLMSRGIKEDEAMAMIVRGFVEPIAKELPMEYALELNRL 462
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 463 IELQMEGSVG 472
>gi|297198865|ref|ZP_06916262.1| FeS assembly protein SufB [Streptomyces sviceus ATCC 29083]
gi|197711214|gb|EDY55248.1| FeS assembly protein SufB [Streptomyces sviceus ATCC 29083]
Length = 473
Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats.
Identities = 200/490 (40%), Positives = 299/490 (61%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y+YG+ +++ A +G+NED++R ISAKK+EP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEYGWADSDTAGASAKRGINEDVVRDISAKKSEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFDKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 172 VIPVGDNKFASLNTAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 285 VAY-EGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG V + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLVEIGEGAHGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|325286418|ref|YP_004262208.1| FeS assembly protein SufB [Cellulophaga lytica DSM 7489]
gi|324321872|gb|ADY29337.1| FeS assembly protein SufB [Cellulophaga lytica DSM 7489]
Length = 481
Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats.
Identities = 315/471 (66%), Positives = 375/471 (79%), Gaps = 6/471 (1%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
Y+YGF T+I+ D P GL+E+I+ IS KKNEP WM +WR+ AYR W M++P WA + Y
Sbjct: 17 YEYGFYTDIESDTFPIGLSEEIVVAISKKKNEPKWMTDWRVEAYRVWEKMEEPDWANVNY 76
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
DF + YY+APK ++LDDVDPELL Y+KLGI I EQ+ L V V
Sbjct: 77 EKPDFQAISYYSAPKKADPNKTLDDVDPELLEMYKKLGISIDEQKKLQNVAVDIVVDSVS 136
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
V TTF++ L + G+IFMPISEAI EHP+LV+KYL TVVP DNFYAALNSAVFTD
Sbjct: 137 -----VATTFQKTLAEKGIIFMPISEAIQEHPELVRKYLGTVVPTTDNFYAALNSAVFTD 191
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSF YIPKGVRCPMELSTYFRIN+ GTGQFERTL++AD+ SYVSYLEGCTAP RDENQLH
Sbjct: 192 GSFCYIPKGVRCPMELSTYFRINQAGTGQFERTLVVADQESYVSYLEGCTAPSRDENQLH 251
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVEL+A+D+AEIKYSTVQNW+PG+ +GKGG+YNFVTKR C +K+SWTQ+ETGSA
Sbjct: 252 AAVVELIAMDDAEIKYSTVQNWFPGNKEGKGGVYNFVTKRALC-EKNAKVSWTQVETGSA 310
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+TWKYPSC+L+G+ S GEFYSIA++N +QQ D+GTKM+HL KNT S I+SKGISAG S N
Sbjct: 311 VTWKYPSCILKGDNSIGEFYSIAVTNNYQQADTGTKMVHLGKNTKSTIISKGISAGKSQN 370
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+YRG V V A ++RNF+QCDSLL+GN CGAHT PYIE+KN S +EHEATTSKI ++
Sbjct: 371 SYRGLVQVSSRAENARNFSQCDSLLMGNECGAHTFPYIETKNKSAMIEHEATTSKIGEDQ 430
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+FYC QRGI E AIALIVNGF +EVL KLPMEFAVEAQKL++ISLEGSVG
Sbjct: 431 IFYCNQRGIDTEKAIALIVNGFSKEVLNKLPMEFAVEAQKLLEISLEGSVG 481
>gi|268592596|ref|ZP_06126817.1| FeS assembly protein SufB [Providencia rettgeri DSM 1131]
gi|291312010|gb|EFE52463.1| FeS assembly protein SufB [Providencia rettgeri DSM 1131]
Length = 499
Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats.
Identities = 285/501 (56%), Positives = 366/501 (73%), Gaps = 25/501 (4%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D V+ +D +YK GF T + D+ KG+NED+IR ISAK+NEP+WML++RL A+
Sbjct: 7 EVGDDVQSWLDDQRYKEGFFTEVATDEMAKGINEDVIRAISAKRNEPEWMLQFRLDAFNH 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DDVDPEL 108
W M++P W + YP +D+ D YY+AP + + + E+
Sbjct: 67 WKGMEEPHWLKANYPNLDYQDYSYYSAPSCGSCDDTCGSQSGATQGTGVAETNNYLTAEV 126
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +LG+P+RE + VAVDA+FDSVSV TT++++L K GVIF SEAI E
Sbjct: 127 EEAFNQLGVPVREGKA--------VAVDAIFDSVSVSTTYRDDLAKHGVIFCSFSEAIQE 178
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+P+LV+KYL +VV DNF+AALN+AV +DG+FVY+PKGV CPMELSTYFRIN TGQF
Sbjct: 179 YPELVQKYLGSVVSSHDNFFAALNAAVASDGTFVYVPKGVHCPMELSTYFRINAAKTGQF 238
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
ERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 239 ERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSEA 298
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ
Sbjct: 299 GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILKGDNSVGEFFSVALTNGNQQ 358
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG C
Sbjct: 359 ADTGTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKILPSAHNARNFTQCDSMLIGTQC 418
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
GAHT PY+E KN++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +L
Sbjct: 419 GAHTFPYVEVKNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSEL 478
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
P+EFAVEAQKL+ ISLE SVG
Sbjct: 479 PLEFAVEAQKLLAISLEHSVG 499
>gi|108803023|ref|YP_642960.1| Iron-regulated ABC transporter membrane component SufB [Rubrobacter
xylanophilus DSM 9941]
gi|108764266|gb|ABG03148.1| Iron-regulated ABC transporter membrane component SufB [Rubrobacter
xylanophilus DSM 9941]
Length = 470
Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats.
Identities = 222/491 (45%), Positives = 307/491 (62%), Gaps = 23/491 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVD--KAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M A + ++++ +++YKYGF+ + KGL+E+I+ IS K EP+WMLE+R
Sbjct: 1 MPADK----TIQELGLEEYKYGFKDPEEYFFKTPRKGLDEEIVTMISLHKKEPEWMLEFR 56
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A + + P+W +DFDD+YYY P G +S D+V + +T+++LGIP
Sbjct: 57 LNALKAFQEKPVPTWG-ADLSELDFDDIYYYIKPVENQG-RSWDEVPESIKKTFDRLGIP 114
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+EILAG V A ++S V KEE +K GV+F+ + + EH DLV++Y
Sbjct: 115 QAEREILAG-------VGAQYESEVVYHNLKEEWEKQGVVFLDMDGGLREHEDLVREYFG 167
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
TV+P DN +AALNSAV++ GSFVY+P GV + L YFRIN + GQFERTLIIADEG
Sbjct: 168 TVIPPDDNKFAALNSAVWSGGSFVYVPPGVHVDIPLQAYFRINAENMGQFERTLIIADEG 227
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
SYV Y+EGCTAP N LH+AVVEL+A NA I+YST+QNW YN VTKR
Sbjct: 228 SYVHYIEGCTAPTYTTNSLHSAVVELIAKPNARIRYSTIQNW-------SHNTYNLVTKR 280
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G + I W GS +T KYP+ L GE + GE S+A + Q D+G K++H+
Sbjct: 281 GVAY-ENATIEWVDGNLGSKVTMKYPAVYLMGEGARGEILSVAYAGDGQHQDAGGKVVHV 339
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A NT+S I SK IS G TYRG + VH GA +S++ +CD+LL+ T PYIE
Sbjct: 340 APNTSSLITSKSISKGTGRATYRGLLKVHEGAVNSKSRVECDALLLDEKARTDTYPYIEI 399
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ N EHEAT SK+ +E LFY + RG+ EE A+A++VNGF+ + ++LP+E+A+E +
Sbjct: 400 EEKKVNTEHEATVSKVGEEQLFYLMSRGLSEEEAMAMVVNGFIEPIAKELPLEYAIELNR 459
Query: 479 LIDISLEGSVG 489
LI + +EGSVG
Sbjct: 460 LIQLEMEGSVG 470
>gi|269991310|emb|CAX12494.1| iron-sulfur cluster formation ABC transporter [Fucus vesiculosus]
Length = 481
Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats.
Identities = 299/486 (61%), Positives = 374/486 (76%), Gaps = 5/486 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ E +++ YKYGF T+I+ + P GLNE IIR I K NEPD+M ++R+ A +
Sbjct: 1 MNEKNATLQQFVNQPYKYGFFTDIETETLPPGLNEKIIRNIIRKNNEPDYMFQFRIGALK 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+W MK P+WA++ + ID+ + YY+APK +L++VDPE+ +T++KLGI + EQ+
Sbjct: 61 KWRKMKSPTWAKLEFSDIDYQKIIYYSAPKKKKTLSNLNEVDPEIKKTFDKLGISLNEQK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LA VAVDAVFDSVS+VTTFK+EL+K GVIF PISEAI +P LVK +L TVVPV
Sbjct: 121 RLA-----NVAVDAVFDSVSIVTTFKQELEKYGVIFCPISEAIKNYPHLVKHFLGTVVPV 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDNF+AALNSAVFTDGSF YIPK +RCP+ELSTYFRIN K GQFERTLIIA+EGS+VSY
Sbjct: 176 GDNFFAALNSAVFTDGSFCYIPKNLRCPLELSTYFRINNKEAGQFERTLIIAEEGSFVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQ D NQLHAA+VEL+AL NAEIKYSTVQNWY GD GKGGI+NFVTKRG G
Sbjct: 236 LEGCTAPQYDNNQLHAAIVELIALKNAEIKYSTVQNWYAGDINGKGGIFNFVTKRGLAIG 295
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
S+ISWTQ+ETGS+ITWKYPSC+L G+ S GEFYS+A++ QQ D+GTKM+H+ NTT
Sbjct: 296 ENSQISWTQVETGSSITWKYPSCVLIGDYSKGEFYSVALTTNRQQADTGTKMIHIGSNTT 355
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S+I+SKG+S G+S N+YRG V + A +SRNF+QCDSLL G + A+T PYI+ +NS+
Sbjct: 356 SQIISKGVSGGYSKNSYRGLVKIGAKALNSRNFSQCDSLLFGVDAQANTFPYIQVQNSTS 415
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEA+TSK+ +E LFY LQRGI EAAI LI+ GF + V KLP+EFA E + L+ I
Sbjct: 416 KIEHEASTSKVGEEQLFYLLQRGIDTEAAITLILTGFCKVVFNKLPIEFASEVEHLLRIK 475
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 476 LEGSVG 481
>gi|68536061|ref|YP_250766.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
gi|68263660|emb|CAI37148.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
Length = 480
Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats.
Identities = 199/492 (40%), Positives = 293/492 (59%), Gaps = 20/492 (4%)
Query: 2 VAVRETVDKVRKIDVDQ---YKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
ET + + +D Y YG+ + A +GLNED++R ISAKKNEP+WML+
Sbjct: 5 AQTPETKPQTDEEIIDSIGAYGYGWHDSDAAGASARRGLNEDVVRDISAKKNEPEWMLKR 64
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL A + P+W IDFD++ Y+ Q+ +D+ ++ TY+KLGI
Sbjct: 65 RLKALDIFDKKPLPTWG-ADLSDIDFDNIKYFVRSTEKQA-QTWEDLPEDIKNTYDKLGI 122
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P E++ L V A ++S V +E+L+K GVIF+ + E+P+L ++Y
Sbjct: 123 PEAEKQRLV------AGVAAQYESEVVYHQIREDLEKQGVIFVDTDTGLREYPELFEEYF 176
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TV+P GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE
Sbjct: 177 GTVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDE 236
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTK
Sbjct: 237 DAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTK 289
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C + W GS +T KYP+ + G + GE S+A + Q D+G KM+H
Sbjct: 290 RTKC-EEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVH 348
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+A +T+S IVSK ++ YRG V V++ A HS + +CD+LL+ + + T PY +
Sbjct: 349 MAPHTSSNIVSKSVARAGGRAAYRGLVQVNKDAHHSASNVECDALLVDSISRSDTYPYND 408
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N L HEAT S++S++ LFY + RGI EE A+A+IV GFV + ++LPME+A+E
Sbjct: 409 IRNDHVTLGHEATVSQVSEDQLFYLMSRGIEEEEAMAMIVRGFVEPIAKELPMEYALELN 468
Query: 478 KLIDISLEGSVG 489
+LI++ +EGSVG
Sbjct: 469 RLIELQMEGSVG 480
>gi|29832867|ref|NP_827501.1| iron-regulated ABC-type transporter [Streptomyces avermitilis
MA-4680]
gi|29609988|dbj|BAC74036.1| putative FeS assembly protein SufB [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats.
Identities = 201/490 (41%), Positives = 298/490 (60%), Gaps = 17/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E + Y+YG+ ++++ A +G+NED++R ISAKKNEP+WM + RL
Sbjct: 1 MTLPIEETAHPELEGLGTYEYGWADSDVAGASAKRGINEDVVRDISAKKNEPEWMTKLRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 61 KGLRLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 119 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 173 VIPVGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR
Sbjct: 233 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRA 285
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 286 VAY-EGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHMA 344
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG V + GAA S++ CD+LL+ + T PY++ +
Sbjct: 345 PNTSSNIVSKSVARGGGRTSYRGLVEIGEGAAGSKSNVLCDALLVDTISRSDTYPYVDVR 404
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 405 EDDVSMGHEATVSKVSDDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 464
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 465 IELQMEGAVG 474
>gi|126452794|ref|YP_001067011.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei 1106a]
gi|167846578|ref|ZP_02472086.1| cysteine desulfurase activator complex subunit SufB [Burkholderia
pseudomallei B7210]
gi|242317836|ref|ZP_04816852.1| FeS assembly protein SufB [Burkholderia pseudomallei 1106b]
gi|254296940|ref|ZP_04964393.1| FeS assembly protein SufB [Burkholderia pseudomallei 406e]
gi|126226436|gb|ABN89976.1| FeS assembly protein SufB [Burkholderia pseudomallei 1106a]
gi|157807547|gb|EDO84717.1| FeS assembly protein SufB [Burkholderia pseudomallei 406e]
gi|242141075|gb|EES27477.1| FeS assembly protein SufB [Burkholderia pseudomallei 1106b]
Length = 484
Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats.
Identities = 307/474 (64%), Positives = 374/474 (78%), Gaps = 6/474 (1%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVSV TTF+E+L +GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDSVSVGTTFREQLAAAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+V YLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ N+YRG V V R A +RN TQCDSLLIG CGAHT PY+ES +EHEATT++IS
Sbjct: 371 AQNSYRGLVRVARTAEGARNHTQCDSLLIGPQCGAHTFPYVESARGDAVVEHEATTTRIS 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYC QRGI + A ALIV GF + VL+ LPMEFA+EA+ L+ +SLEG+VG
Sbjct: 431 EDRLFYCQQRGIDPQEATALIVGGFCQAVLEALPMEFALEAKALLAVSLEGAVG 484
>gi|51209990|ref|YP_063654.1| putative ABC transporter [Gracilaria tenuistipitata var. liui]
gi|50657744|gb|AAT79729.1| ABC transporter subunit [Gracilaria tenuistipitata var. liui]
Length = 476
Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats.
Identities = 285/480 (59%), Positives = 373/480 (77%), Gaps = 5/480 (1%)
Query: 10 KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ YKYGF TNIQ D P GLN+ I+ IS KKNEP ++ ++R+ AY++W M
Sbjct: 2 TINNFINQPYKYGFHTNIQSDSLPPGLNQKIVETISIKKNEPKYLKQFRINAYKKWQKMN 61
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P W +++Y I++D + YY++PK Q+LD+VDPE+L T+ KLGIP+ EQ+ L
Sbjct: 62 EPQWGKLKYKQIEYDQITYYSSPKYKKSLQNLDEVDPEILDTFNKLGIPLNEQKKL---- 117
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
+ VAVDA+FDS S+ TTF++EL + G+IF I+EA+ ++PDLVKKYL +VVP+GDN++A
Sbjct: 118 -TNVAVDAIFDSTSIATTFQKELGEVGIIFCSITEAVNKYPDLVKKYLGSVVPIGDNYFA 176
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAVF+DGSF YIP CP+ELSTYFRIN K GQFERTLIIADE SYVSYLEGCTA
Sbjct: 177 ALNSAVFSDGSFCYIPPNTHCPLELSTYFRINNKEAGQFERTLIIADENSYVSYLEGCTA 236
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
PQ NQLHAAVVEL+AL NA IKYSTVQNWY G+S+G+GGIYNFVTKRG C G SKI
Sbjct: 237 PQFSNNQLHAAVVELIALKNATIKYSTVQNWYSGNSEGEGGIYNFVTKRGLCAGDDSKIL 296
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
WTQ+ETGSAITWKYPSC+L G + GEF S+A++N +QQ D+G+KM+H+ NT S+I+SK
Sbjct: 297 WTQIETGSAITWKYPSCILTGSNTIGEFSSVALTNNYQQADTGSKMIHIGVNTKSKIISK 356
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GISAG S NTYRG V + A ++RN++QCDSL++G +C A+T PYI+ +N S +EHEA
Sbjct: 357 GISAGHSINTYRGLVKIGPKATYARNYSQCDSLILGKSCQANTFPYIQVRNPSARIEHEA 416
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ S+I +E +FY LQRGI E AI+L+++GF ++VLQ+LPMEFA+EA +L+++ LEG+VG
Sbjct: 417 SASRIGEEQIFYFLQRGIDIEEAISLMISGFCKDVLQELPMEFAMEADRLLNLKLEGTVG 476
>gi|134098744|ref|YP_001104405.1| putative iron-regulated ABC-type transporter [Saccharopolyspora
erythraea NRRL 2338]
gi|291003571|ref|ZP_06561544.1| putative iron-regulated ABC-type transporter [Saccharopolyspora
erythraea NRRL 2338]
gi|133911367|emb|CAM01480.1| putative iron-regulated ABC-type transporter [Saccharopolyspora
erythraea NRRL 2338]
Length = 487
Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats.
Identities = 199/475 (41%), Positives = 290/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ + A +GLNED++R ISAKK EP+WMLE RL A + + P+W
Sbjct: 29 LGNYEYGWADPDTAGASARRGLNEDVVREISAKKGEPEWMLETRLKALKLFERKPMPNWG 88
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ Q+ +D+ ++ TY+KLGIP E++ L
Sbjct: 89 -ADLSGIDFDNIKYFVRSTEKQA-QTWEDLPEDIKNTYDKLGIPEAEKQRLV------AG 140
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GV F+ A+ EHP+ K+Y +V+P GDN ++ALN+A
Sbjct: 141 VAAQYESEVVYHKIREDLEAQGVQFLDTDTALREHPETFKEYFGSVIPAGDNKFSALNTA 200
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLI+ DE +YV Y+EGCTAP
Sbjct: 201 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIVVDEDAYVHYVEGCTAPIYSS 260
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE+V A +Y+T+QNW +YN VTKR + + W
Sbjct: 261 DSLHSAVVEIVVKKGARCRYTTIQNW-------SNNVYNLVTKRAKA-EEGATMEWVDGN 312
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYPS L GE + GE S+A + Q D+G KM HLA +T+S IVSK I+ G
Sbjct: 313 LGSKVTMKYPSVFLMGEHAKGEVLSVAFAGEGQHQDAGAKMEHLAPHTSSTIVSKSIARG 372
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V + A HS + +CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 373 GGRTSYRGLVKVAKRANHSASTVKCDALLVDTISRSDTYPYVDVRVDDVSMGHEATVSKV 432
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY +QRG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 433 SDDQLFYLMQRGLTEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 487
>gi|302868770|ref|YP_003837407.1| FeS assembly protein SufB [Micromonospora aurantiaca ATCC 27029]
gi|315504760|ref|YP_004083647.1| fes assembly protein sufb [Micromonospora sp. L5]
gi|302571629|gb|ADL47831.1| FeS assembly protein SufB [Micromonospora aurantiaca ATCC 27029]
gi|315411379|gb|ADU09496.1| FeS assembly protein SufB [Micromonospora sp. L5]
Length = 476
Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 294/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y+YG+ ++ A +GL+E ++R ISAKKNEP WML+ RL R + P+W
Sbjct: 18 LGRYEYGWADPDVAGASAQRGLSEAVVRDISAKKNEPAWMLDLRLKGLRLFGRKPMPNWG 77
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 78 -ADLTGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGIPEAEKQRLV------AG 129
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GV+F+ A+ EH DL K+Y TV+PVGDN +AALN++
Sbjct: 130 VAAQYESEVVYHQIREDLEEQGVVFLDTDTALKEHEDLFKEYFGTVIPVGDNKFAALNTS 189
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 190 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYSS 249
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 250 DSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVCH-EGATMEWVDGN 301
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A++ Q D+G KM+H A +T+S IVSK I+ G
Sbjct: 302 IGSKVTMKYPAVYMTGEHAKGEVLSVAMAGEGQHQDAGAKMVHAAPHTSSTIVSKSIARG 361
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V G+ S++ +CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 362 GGRTSYRGLVQVLEGSTSSKSTVKCDALLVDTISRSDTYPYVDIREDDVSMGHEATVSKV 421
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 422 SEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 476
>gi|260578755|ref|ZP_05846662.1| FeS assembly protein SufB [Corynebacterium jeikeium ATCC 43734]
gi|258603053|gb|EEW16323.1| FeS assembly protein SufB [Corynebacterium jeikeium ATCC 43734]
Length = 480
Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats.
Identities = 199/492 (40%), Positives = 292/492 (59%), Gaps = 20/492 (4%)
Query: 2 VAVRETVDKVRKIDVDQ---YKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
ET + + +D Y YG+ + A +GLNED++R ISAKKNEP+WML+
Sbjct: 5 AQTPETKPQTDEEIIDSIGAYGYGWHDSDAAGASARRGLNEDVVRDISAKKNEPEWMLKR 64
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL A + P+W IDFD++ Y+ Q+ +D+ ++ TY+KLGI
Sbjct: 65 RLKALDIFDKKPLPTWG-ADLSDIDFDNIKYFVRSTEKQA-QTWEDLPEDIKNTYDKLGI 122
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P E++ L V A ++S V +E+L+K GVIF+ + E+P+L ++Y
Sbjct: 123 PEAEKQRLV------AGVAAQYESEVVYHQIREDLEKQGVIFVDTDTGLREYPELFEEYF 176
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TV+P GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE
Sbjct: 177 GTVIPAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDE 236
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTK
Sbjct: 237 DAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTK 289
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C + W GS +T KYP+ + G + GE S+A + Q D+G KM+H
Sbjct: 290 RTKC-EEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVH 348
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+A T+S IVSK ++ YRG V V++ A HS + +CD+LL+ + + T PY +
Sbjct: 349 MAPYTSSNIVSKSVARAGGRAAYRGLVQVNKDAHHSASNVECDALLVDSISRSDTYPYND 408
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N L HEAT S++S++ LFY + RGI EE A+A+IV GFV + ++LPME+A+E
Sbjct: 409 IRNDHVTLGHEATVSQVSEDQLFYLMSRGIEEEEAMAMIVRGFVEPIAKELPMEYALELN 468
Query: 478 KLIDISLEGSVG 489
+LI++ +EGSVG
Sbjct: 469 RLIELQMEGSVG 480
>gi|241764803|ref|ZP_04762810.1| FeS assembly protein SufB [Acidovorax delafieldii 2AN]
gi|241365680|gb|EER60392.1| FeS assembly protein SufB [Acidovorax delafieldii 2AN]
Length = 484
Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats.
Identities = 314/490 (64%), Positives = 384/490 (78%), Gaps = 7/490 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + E + + Y +GF T+I+ D P GL+E IR IS +K EP ++L+WRL
Sbjct: 1 MPPI-EQAAPLAQALERPYLHGFVTDIESDSLPPGLDEGTIRAISRRKREPAFLLDWRLA 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPI 119
A+ RW M PSWA++ +DF L YY+APKS GP+SL +VDP+LL TYEKL +P+
Sbjct: 60 AFERWQAMPPPSWAKLNMEPVDFQALSYYSAPKSLKDGPKSLAEVDPKLLETYEKLNVPL 119
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG VAVDAVFDSVSV TTF+E+L K GVIF S A+ HP+L+++YL T
Sbjct: 120 HERARLAG-----VAVDAVFDSVSVGTTFREQLAKVGVIFCSFSHAVEHHPELIERYLGT 174
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP GDNFYAALNSAVF+DGSFVYIPKGVRCPMELS+YFRIN + TGQFERTLIIA+EGS
Sbjct: 175 VVPRGDNFYAALNSAVFSDGSFVYIPKGVRCPMELSSYFRINARNTGQFERTLIIAEEGS 234
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+VSYLEGCTAPQRDE+QLHAAVVELVA ++A IKYSTVQNWYPGD G+GGIYNFVTKRG
Sbjct: 235 HVSYLEGCTAPQRDEHQLHAAVVELVAHEDAHIKYSTVQNWYPGDENGRGGIYNFVTKRG 294
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G R+ I+WTQ+ETGSAITWKYPS +LRG++S GEF+SIA+SN FQQ D+GTKM+HL
Sbjct: 295 LCAGKRAHIAWTQIETGSAITWKYPSVVLRGDESSGEFHSIAVSNHFQQADTGTKMIHLG 354
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+NT SRIVSKGISAG + N+YRG V V AA + N TQCDSLLIG++CGAHT PYI++
Sbjct: 355 RNTKSRIVSKGISAGHAQNSYRGLVRVAPTAAGAANHTQCDSLLIGHDCGAHTYPYIDTA 414
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
S +EHEATT++IS+E LFYC QRG+ + A ALIV GF + VL++LPMEFA+EA+ L
Sbjct: 415 CSDAVVEHEATTTRISEERLFYCQQRGMDPQDATALIVGGFCQAVLEELPMEFALEAKAL 474
Query: 480 IDISLEGSVG 489
+ +SLEG+VG
Sbjct: 475 LAVSLEGAVG 484
>gi|118411105|ref|YP_874499.1| iron-sulfur cluster formation ABC transporter [Thalassiosira
pseudonana]
gi|224015810|ref|XP_002297553.1| plastid protein [Thalassiosira pseudonana CCMP1335]
gi|116739852|gb|ABK20722.1| iron-sulfur cluster formation ABC transporter [Thalassiosira
pseudonana]
gi|220967817|gb|EED86193.1| plastid protein [Thalassiosira pseudonana CCMP1335]
Length = 485
Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats.
Identities = 299/490 (61%), Positives = 383/490 (78%), Gaps = 6/490 (1%)
Query: 1 MVAVRETVDK-VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M +T++ + K+ YKYGF T I+ D KGLNE++IR +S KKNEP ++L++RL
Sbjct: 1 MNQSNKTLNNNITKLVNQPYKYGFSTTIEKDIIEKGLNENVIRLLSKKKNEPKFLLDFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY++W MK P WA++++ ID+ D+ YY+APK SLD+VDPELL T+ KLGI +
Sbjct: 61 KAYKKWKEMKCPEWAQLKFAEIDYQDIVYYSAPKVKKRLNSLDEVDPELLETFNKLGISL 120
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+ VA+DAVFDSVS+ TTFKEEL + GVIF ISEA+ ++ L++KYL T
Sbjct: 121 NEQKRLS-----NVAIDAVFDSVSIATTFKEELAEYGVIFSSISEAVHDYTKLIEKYLGT 175
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+GDN+++ALNSAVFTDGSF YIPK V CP++LSTYFRIN+K +GQFERTLI+A+E S
Sbjct: 176 VVPIGDNYFSALNSAVFTDGSFCYIPKDVICPLDLSTYFRINDKNSGQFERTLIVAEENS 235
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
VSYLEGCTAPQ D NQLHAA+VEL+ALDNA IKYSTVQNWY GD +G+GG++NFVTKRG
Sbjct: 236 QVSYLEGCTAPQYDNNQLHAAIVELIALDNANIKYSTVQNWYSGDQKGQGGVFNFVTKRG 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G SKISWTQ+ETGS+ITWKYPSC+L GE + GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 296 LCAGSSSKISWTQVETGSSITWKYPSCILVGENAQGEFYSVALTNNYQQADTGTKMIHVG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT SRIVSKGISAG S N+YRG VSV++ A +RN++QCDSLLIGN A+T P+I +
Sbjct: 356 KNTRSRIVSKGISAGNSKNSYRGFVSVNKKAIGARNYSQCDSLLIGNLSNANTFPFISVQ 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEA+TSKI +E +FY LQRGI E I L+++GF REV +LP+EFA EA +L
Sbjct: 416 NCTTKIEHEASTSKIGEEQIFYFLQRGISIEKGIELMISGFCREVFTELPLEFASEADRL 475
Query: 480 IDISLEGSVG 489
+ + LEGSVG
Sbjct: 476 LSLKLEGSVG 485
>gi|295401406|ref|ZP_06811377.1| FeS assembly protein SufB [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109637|ref|YP_003987953.1| FeS assembly protein SufB [Geobacillus sp. Y4.1MC1]
gi|294976621|gb|EFG52228.1| FeS assembly protein SufB [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214738|gb|ADP73342.1| FeS assembly protein SufB [Geobacillus sp. Y4.1MC1]
Length = 465
Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats.
Identities = 213/476 (44%), Positives = 296/476 (62%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ V +A +GL +++ IS KNEP WMLE+RL A + + P W
Sbjct: 7 EIGEYKYGFVDKDVSVFRAKRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++DFD++ YY P G +S D+V PE+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSSLDFDEITYYVKPTEKSG-RSWDEVPPEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+K GVIF A+ E+ DL ++Y + VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEKLGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LH+AVVE++ +A +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TASLHSAVVEIIVKKDAYCRYTTIQNW-------SNNVFNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A+ SR+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGMVHFGRKASGSRSNIECDTLIMDNQSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|291617268|ref|YP_003520010.1| SufB [Pantoea ananatis LMG 20103]
gi|291152298|gb|ADD76882.1| SufB [Pantoea ananatis LMG 20103]
gi|327393720|dbj|BAK11142.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufB [Pantoea ananatis AJ13355]
Length = 497
Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats.
Identities = 294/506 (58%), Positives = 373/506 (73%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET D V+ + YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSRHSETSDDVQMWEGKLNYKEGFFTQLQTEEFANGINEDVVRAISAKRNEPEWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DD 103
A+R WL M++P W + Y +D+ D YY+AP + D
Sbjct: 61 KAFRAWLEMEEPHWLKAHYEKLDYQDYSYYSAPSCGNCDDTCASEPGATQASGSAPASDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + +LG+P+RE + +VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 121 LTQEVENAFNQLGVPVREGK--------EVAVDAIFDSVSVSTTYRSKLAEQGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI +HP+LVKKYL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIHDHPELVKKYLGTVVPPNDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PG
Sbjct: 233 KTGQFERTILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
G+GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A++
Sbjct: 293 GE-GEGGILNFVTKRALCEGDYSKMSWTQSETGSAITWKYPSCILRGDHSVGEFYSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG +CGAHT PY+E++N++ LEHEATTS+I ++ +FYCLQRGI EE AI++IVNGF ++
Sbjct: 412 IGPDCGAHTFPYVETRNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|239917651|ref|YP_002957209.1| Iron-regulated ABC transporter membrane component SufB [Micrococcus
luteus NCTC 2665]
gi|239838858|gb|ACS30655.1| Iron-regulated ABC transporter membrane component SufB [Micrococcus
luteus NCTC 2665]
Length = 490
Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats.
Identities = 204/488 (41%), Positives = 303/488 (62%), Gaps = 18/488 (3%)
Query: 4 VRETVDKVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
++E +DK +++ + Y+YG+ +++ +KA +GLNED++R IS KK+EP+WM RL A
Sbjct: 19 IQEILDKNPELNAIGAYQYGWADSDAAGEKAVRGLNEDVVRDISGKKDEPEWMRNLRLKA 78
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+W IDFD++ Y+ ++ +D+ ++ TYE+LGIP E
Sbjct: 79 LKYFERKPMPAWGP-DLSGIDFDNIKYFVRSTEGQA-KTWEDLPEDIRNTYERLGIPEAE 136
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L V A ++S V +E+L++ GV+F+ A+ EHP++ ++Y TV+
Sbjct: 137 RERLV------AGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALKEHPEIFEEYFGTVI 190
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PVGDN +A+LN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE SYV
Sbjct: 191 PVGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYV 250
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + + LH+AVVE+V NA ++Y+T+QNW +YN VTKR
Sbjct: 251 HYIEGCTAPIYNSDSLHSAVVEIVVKKNARVRYTTIQNW-------STNVYNLVTKRAVV 303
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ W GS +T KYP+ L GE + GE S+A + Q D+G+KM+H+A +
Sbjct: 304 EA-GGTMEWIDGNIGSKVTMKYPAVYLTGEHATGETLSVAFAGKDQHQDTGSKMVHMAPH 362
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S IVSK ++ YRG V + GA S N CD+LL+ + T PYI+ +
Sbjct: 363 TNSSIVSKSVARSGGRAAYRGLVQIAEGANGSANSVVCDALLVDTVSRSDTYPYIDIRED 422
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
L HEAT SK+S+E LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E KLI+
Sbjct: 423 DVTLGHEATVSKVSEEQLFYLMSRGMSEDEAMAMIVRGFIEPIARELPMEYALELNKLIE 482
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 483 LQMEGSVG 490
>gi|254281660|ref|ZP_04956628.1| FeS assembly protein SufB [gamma proteobacterium NOR51-B]
gi|219677863|gb|EED34212.1| FeS assembly protein SufB [gamma proteobacterium NOR51-B]
Length = 479
Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats.
Identities = 312/482 (64%), Positives = 385/482 (79%), Gaps = 7/482 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++ + +Y GF T+I+ D P GLNE+++RFIS +KNEP+W+LEWRL AYR WL M
Sbjct: 4 QQIDRAISREYAAGFTTDIESDTLPPGLNEEVVRFISQRKNEPEWLLEWRLEAYRGWLNM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
++P+WA + YP + +D+ +Y++PK P+SLD+VDPEL+ TY KLGIP+ EQE LAG
Sbjct: 64 QEPNWAHVEYPPVQVEDISFYSSPKDHKDRPKSLDEVDPELIETYNKLGIPLHEQEALAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V V V TTF+E+L ++GV+F ISEA+ E+P+L++KYL +VVP DN+
Sbjct: 124 VAVDVVFDSVS-----VATTFREKLAEAGVLFCSISEAVHEYPELIRKYLGSVVPRNDNY 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
YAALNSAV++DGSFVYIPKGVRCPMELSTYFRINE+ TGQFERTLIIADEGS+VSYLEGC
Sbjct: 179 YAALNSAVYSDGSFVYIPKGVRCPMELSTYFRINEQNTGQFERTLIIADEGSHVSYLEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP RDENQLHAAVVELVAL AEIKYSTVQNWYPGD+ GKGGIYNFVTKRG SK
Sbjct: 239 TAPMRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDANGKGGIYNFVTKRGVAH-TDSK 297
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
ISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++N QQ D+GTKM+HL KNT S I+
Sbjct: 298 ISWTQVETGSAITWKYPSCILQGDNSVGEFYSVALTNNAQQADTGTKMIHLGKNTRSTII 357
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S+N YRG V + A SRN+TQCDSLLIG+ C AHT PYIES+N S +EH
Sbjct: 358 SKGISAGKSSNAYRGLVRMSARADGSRNYTQCDSLLIGDRCAAHTFPYIESRNPSAVVEH 417
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTSK+SD+ ++ C QRG+ E A+++IVNGF REV ++LPMEFA+EA KL+++SLEGS
Sbjct: 418 EATTSKVSDDQMYVCQQRGLDAEKAVSMIVNGFCREVFKELPMEFAMEAGKLLEVSLEGS 477
Query: 488 VG 489
VG
Sbjct: 478 VG 479
>gi|319947900|ref|ZP_08022085.1| FeS assembly protein SufB [Dietzia cinnamea P4]
gi|319438443|gb|EFV93378.1| FeS assembly protein SufB [Dietzia cinnamea P4]
Length = 483
Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats.
Identities = 200/487 (41%), Positives = 291/487 (59%), Gaps = 17/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
T D+ R + QY YG+ + A +GL+E ++R ISAKKNE +WML+ RL A
Sbjct: 13 TEPTTDEERIASIGQYNYGWHDSDDAGAAAQRGLSEAVVRDISAKKNESEWMLDKRLKAL 72
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + P W IDFD++ Y+ +D+ ++ TY+KLGIP E+
Sbjct: 73 KIFDKKPMPKWGS-DLSGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGIPEAEK 130
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ L V A ++S V +E+L+ GVIFM A+ EHP+ ++Y +V+P
Sbjct: 131 QRLV------AGVAAQYESEVVYHQIREDLESQGVIFMDTDTALKEHPEFFEEYFGSVIP 184
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV
Sbjct: 185 SGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVH 244
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 245 YVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRARA- 296
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W GS +T KYP+ L GE + GE S+A + Q D+G+KMLHLA NT
Sbjct: 297 EEGATMEWIDGNIGSKVTMKYPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMLHLAPNT 356
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK ++ G + YRG + ++ GA S++ +CD+LL+ N + T PYI+ +
Sbjct: 357 SSNIVSKSVARGGGRSAYRGLIQINPGAKGSKSNVECDALLVDNISRSDTYPYIDIREDD 416
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
L HEAT SK+S + LFY + RG+ EE A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 417 VTLGHEATVSKVSQDQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIEL 476
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 477 QMEGSVG 483
>gi|332969526|gb|EGK08545.1| FeS assembly protein SufB [Desmospora sp. 8437]
Length = 474
Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats.
Identities = 207/483 (42%), Positives = 294/483 (60%), Gaps = 25/483 (5%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP--- 71
+Y+YGF ++ V ++ +GL +I+ IS K+EP WML++RL + ++ M P
Sbjct: 8 SSEYQYGFHDKDVSVFRSKRGLTREIVEEISRMKDEPQWMLDFRLKSLEQFYKMPMPSSE 67
Query: 72 --SW---ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
W + +DF+D+ YY P G +S D+V E+ RT+++LGIP EQ+ LA
Sbjct: 68 NSKWFSLLPGKLDDLDFNDITYYVKPSERQG-RSWDEVPEEIKRTFDRLGIPEAEQKFLA 126
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G V A ++S V ++EL+ GVIF A+ E+P+LV+KY T+VP DN
Sbjct: 127 G-------VSAQYESEVVYHNMQKELEDQGVIFCDTDTAVKEYPELVQKYFGTIVPPTDN 179
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALNSAV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EG
Sbjct: 180 KFAALNSAVWSGGSFIYVPKGVKCEVPLQAYFRINSQNMGQFERTLIIADEESFVHYVEG 239
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP + LH+AVVE++ D+A +Y+T+QNW P +YN VTKR +
Sbjct: 240 CTAPIYSTDSLHSAVVEIIVKDHARCRYTTIQNWAP-------NVYNLVTKRAVA-EKGA 291
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYP+ +++GE + + SIA++ Q D+G K+ LA N TS I
Sbjct: 292 HMEWVDGNIGSKLTMKYPAVIMKGEGAKADVLSIAVAGKGQHQDAGAKVTALAPNCTSTI 351
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSK IS TYRG S + A S+ +CD+L++ N + TIPY E K LE
Sbjct: 352 VSKSISKQGGKVTYRGLSSFGKNAHGSKAKVECDTLILDNQSTSDTIPYNEIKTDDITLE 411
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEAT SK+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EG
Sbjct: 412 HEATVSKVSEEQLFYLMSRGLSEEEATQMIVMGFIEPFTKELPMEYAVEMNRLIKYEMEG 471
Query: 487 SVG 489
S+G
Sbjct: 472 SIG 474
>gi|197285274|ref|YP_002151146.1| cysteine desulfurase activator complex subunit SufB [Proteus
mirabilis HI4320]
gi|227355704|ref|ZP_03840097.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Proteus mirabilis ATCC 29906]
gi|194682761|emb|CAR42984.1| putative component of cysteine desulfurase activator complex
[Proteus mirabilis HI4320]
gi|227164023|gb|EEI48920.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Proteus mirabilis ATCC 29906]
Length = 498
Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats.
Identities = 284/487 (58%), Positives = 360/487 (73%), Gaps = 25/487 (5%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
YK GF T+I D KGLNE ++R ISAK+NEP+WMLE+RL AYR WL M++P W + Y
Sbjct: 21 YKEGFYTDISTDTLDKGLNEAVVRAISAKRNEPEWMLEFRLDAYRHWLEMEEPHWLKADY 80
Query: 79 PAIDFDDLYYYAAPKS----------------IVGPQSLDDVDPELLRTYEKLGIPIREQ 122
P++++ D YY+AP + ++ D + E+ + +LG+P+RE
Sbjct: 81 PSLNYQDYSYYSAPSCGACCANGSCASGNNEAVSTQETQDYLTKEVEDAFNQLGVPVRE- 139
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
VAVDA+FDSVSV TT++EEL K GVIF EAI E+P+LV++YL TVV
Sbjct: 140 -------GQSVAVDAIFDSVSVSTTYREELAKHGVIFCSFGEAIQEYPELVRQYLGTVVS 192
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN++AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQFERT++IADEGSYVS
Sbjct: 193 SHDNYFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAQTGQFERTILIADEGSYVS 252
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G GGI NFVTKR C
Sbjct: 253 YIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSE-GGILNFVTKRALCE 311
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +K+SWTQ ETGSAITWKYPS +L+G+ S EF+S+A++NG QQ D+GTKM+H+ KNT
Sbjct: 312 GENAKMSWTQSETGSAITWKYPSVILKGDNSTAEFFSVALTNGNQQADTGTKMIHIGKNT 371
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SKGISAG S N+YRG V V GA ++RN+TQCDS+LIG CGAHT PY+E N+S
Sbjct: 372 KSTIISKGISAGKSQNSYRGLVKVLPGAQNARNYTQCDSMLIGTECGAHTFPYVEVMNNS 431
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEATTS+I ++ LFYC QRG+ E+ AI++IVNGF ++V +LP+EFAVEAQKL+ I
Sbjct: 432 AQLEHEATTSRIGEDQLFYCRQRGLSEDDAISMIVNGFCKDVFSELPLEFAVEAQKLLAI 491
Query: 483 SLEGSVG 489
SLE SVG
Sbjct: 492 SLEHSVG 498
>gi|238060119|ref|ZP_04604828.1| FeS assembly protein sufB [Micromonospora sp. ATCC 39149]
gi|237881930|gb|EEP70758.1| FeS assembly protein sufB [Micromonospora sp. ATCC 39149]
Length = 476
Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 296/475 (62%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y+YG+ ++++ A +GL+E ++R ISAKKNEP WML+ RL R + P+W
Sbjct: 18 LGRYEYGWADSDVAGAAAQRGLSEAVVRDISAKKNEPAWMLDLRLKGLRLFGRKPMPAWG 77
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY++LGIP E++ L
Sbjct: 78 -ADLTGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDRLGIPEAEKQRLV------AG 129
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GV+F+ A+ EH D+ K+Y TV+PVGDN +AALN++
Sbjct: 130 VAAQYESEVVYHKIREDLEEQGVVFLDTDTALREHEDVFKEYFGTVIPVGDNKFAALNTS 189
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 190 VWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPLYSS 249
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 250 DSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVCH-EGATMEWVDGN 301
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A++ Q D+G KM+H A +T+S I+SK I+ G
Sbjct: 302 IGSKVTMKYPAVYMTGEHAKGEVLSVAMAGEGQHQDAGAKMVHAAPHTSSTIISKSIARG 361
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V G+ SR+ +CD+LL+ + T PY++ + ++ HEAT SKI
Sbjct: 362 GGRTSYRGLVQVLEGSHSSRSTVKCDALLVDTISRSDTYPYVDIREDDVSMGHEATVSKI 421
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A+IV GF+ V ++LPME+A+E +LI++ +EG+VG
Sbjct: 422 SDDQLFYLMSRGLSEDEAMAMIVRGFIEPVAKELPMEYALELNRLIELQMEGAVG 476
>gi|296170679|ref|ZP_06852254.1| FeS assembly protein SufB [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894668|gb|EFG74402.1| FeS assembly protein SufB [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 482
Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 290/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ +T++ A +GL+E ++R ISAKKNEPDWML+ RL A R + P+W
Sbjct: 24 LGRYGYGWADTDVAGASAQRGLSEAVVRDISAKKNEPDWMLQTRLKALRIFDRKPMPTWG 83
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY+KLGIP E++ L
Sbjct: 84 S-NLGGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTYDKLGIPEAEKQRLV------AG 135
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHP+L +++ TV+P GDN ++ALN+A
Sbjct: 136 VAAQYESEVVYHQIREDLEAQGVIFLDTDTGLREHPELFQQHFGTVIPAGDNKFSALNTA 195
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 196 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYTS 255
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 256 DSLHSAVVEIIVKPGGRCRYTTIQNW-------SNNVYNLVTKRARAEA-GATMEWVDGN 307
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S IVSK ++ G
Sbjct: 308 IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDAGAKMLHLAPNTSSNIVSKSVARG 367
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 368 GGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 427
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 428 SDNQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|220912601|ref|YP_002487910.1| FeS assembly protein SufB [Arthrobacter chlorophenolicus A6]
gi|219859479|gb|ACL39821.1| FeS assembly protein SufB [Arthrobacter chlorophenolicus A6]
Length = 487
Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats.
Identities = 204/490 (41%), Positives = 300/490 (61%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ E ++K ++ + Y+YG+ V A +GL+E+++R ISAKK+EP+WML+ RL
Sbjct: 14 TVISEILEKNPELHGIGNYEYGWADKNDVGANARRGLDEEVVRDISAKKSEPEWMLDLRL 73
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +++ ++ TY+KLGIP
Sbjct: 74 KGLKYFDRKPMPTWG-ADLSGIDFDNIKYFVRSTEKQATS-WEELPEDIKNTYDKLGIPE 131
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L+K GVIF+ A+ EHP++ ++Y T
Sbjct: 132 AEKQRLV------SGVAAQYESEVVYHQLREDLEKQGVIFLDTDTALKEHPEIFQEYFGT 185
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++PVGDN +A+LN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE S
Sbjct: 186 IIPVGDNKFASLNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEDS 245
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V A ++Y+T+QNW +YN VTKR
Sbjct: 246 YVHYIEGCTAPIYTSDSLHSAVVEIVVKKGARVRYTTIQNW-------SNNVYNLVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 299 VCEA-GGTMEWVDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKMVHIA 357
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT S I+SK ++ G YRG V V GA HS N +CD+LL+ + T PYI+ +
Sbjct: 358 PNTKSSIISKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPYIDIR 417
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
L HEAT S++S+E LFY + RG+PE+ A+A+IV GF+ + ++LPME+A+E +L
Sbjct: 418 EDDVQLGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALELNRL 477
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 478 IELQMEGSVG 487
>gi|326329984|ref|ZP_08196298.1| FeS assembly protein SufB [Nocardioidaceae bacterium Broad-1]
gi|325952192|gb|EGD44218.1| FeS assembly protein SufB [Nocardioidaceae bacterium Broad-1]
Length = 472
Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats.
Identities = 197/490 (40%), Positives = 302/490 (61%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ++ E +++ I +Y++G+ ++ A +GLN+ ++R IS KK+EP WML+ RL
Sbjct: 1 MTSIEELNPELKGI--GKYEFGWADPDVAGAAAQRGLNDAVVRDISGKKSEPQWMLDLRL 58
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 59 KGLKLFGRKPMPTWGS-DLSDIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGIPE 116
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GV+F+ A+ EHP++ ++Y T
Sbjct: 117 AEKQRLV------AGVAAQYESEVVYHQIREDLEQQGVLFLDTDTALKEHPEIFQEYFGT 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADEGS
Sbjct: 171 VIPVGDNKFAALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEGS 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR
Sbjct: 231 YVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A
Sbjct: 284 VC-EEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHAA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S I+SK ++ G +YRG + V+ GA S++ CD+LL+ + T PY++ +
Sbjct: 343 PNTSSSILSKSVARGGGRTSYRGLIQVNEGAHGSKSNVLCDALLVDQISRSDTYPYVDIR 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA+ SK+SD+ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 403 EDDVSMGHEASVSKVSDDQLFYLMSRGMAEDEAMAMIVRGFVEPIAKELPMEYALELNRL 462
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 463 IELQMEGAVG 472
>gi|78484924|ref|YP_390849.1| cysteine desulfurase activator complex subunit SufB [Thiomicrospira
crunogena XCL-2]
gi|78363210|gb|ABB41175.1| Iron-regulated ABC transporter membrane component SufB
[Thiomicrospira crunogena XCL-2]
Length = 496
Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats.
Identities = 286/499 (57%), Positives = 370/499 (74%), Gaps = 13/499 (2%)
Query: 1 MVAVRETVDKVRKIDVDQ-YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + + + ++ YK GF T V+ KGLNE +IR ISAKKNEP+WML++RL
Sbjct: 1 MSEATQYQEINDLLSKNKGYKEGFYTQTTVETFEKGLNETVIRAISAKKNEPEWMLDFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL---------DDVDPELLR 110
A+ W TMK+P WA+ Y +D+ D YY+AP+ ++DPE+ +
Sbjct: 61 KAFEHWKTMKEPHWAKAEYEPLDYQDYSYYSAPECSACGDHCQTDGADAVEPEMDPEVAK 120
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+ LG+P+ E + + +AVDA+FDSVSV TT +E+L K G+IF SEA+ ++P
Sbjct: 121 AFAALGVPVYGDET---SEKTNIAVDAIFDSVSVSTTKREDLSKLGIIFCSFSEAVQDYP 177
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+LV+KYL TVVP DN++AALNSAV +DG+FVYIP+GVR P++LSTYFRINE TGQFER
Sbjct: 178 ELVQKYLGTVVPYHDNYFAALNSAVASDGTFVYIPEGVRSPIDLSTYFRINEAKTGQFER 237
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
T++IAD+ SYVSYLEGC+AP RD QLHAAVVE++ +NAE+KYSTVQNWYPGD +GG
Sbjct: 238 TILIADKNSYVSYLEGCSAPVRDTYQLHAAVVEVIVHENAEVKYSTVQNWYPGDEDCEGG 297
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
I NFVTKRG C G SK+SWTQ ETGSAITWKYPSC+L+G+ S GEFYS+A++N QQ D
Sbjct: 298 ILNFVTKRGVCEGANSKLSWTQAETGSAITWKYPSCVLKGDNSIGEFYSVALTNRRQQAD 357
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+GTKM+H+ KNT S I+SKG+SAG S+NTYRG V + A +RNFTQCDS+LIG+ CGA
Sbjct: 358 TGTKMIHIGKNTRSTIISKGLSAGKSDNTYRGLVKILPTAEGARNFTQCDSMLIGDQCGA 417
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
HT PYIE +N + +EHEATTS+I ++ LFYC QRGI E+ AI++IVNGF +EV +LP+
Sbjct: 418 HTFPYIEVENPTAKMEHEATTSRIGEDQLFYCQQRGISEQDAISMIVNGFCKEVFSELPL 477
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFA EA++L+ ISLEGSVG
Sbjct: 478 EFAQEAEELLAISLEGSVG 496
>gi|172040687|ref|YP_001800401.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
gi|171851991|emb|CAQ04967.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
Length = 476
Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats.
Identities = 196/492 (39%), Positives = 289/492 (58%), Gaps = 19/492 (3%)
Query: 1 MVAVRETVDKVRKID--VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
M + + ++I + Y YG+ + A +GLNED++R ISAKKNEP+WMLE
Sbjct: 1 MTQAADKLQSDQEIIDSIGAYGYGWHDSDDAGASARRGLNEDVVRDISAKKNEPEWMLER 60
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL A + P+W IDFD + Y+ +D+ ++ TY+KLGI
Sbjct: 61 RLKALEIFDKKPMPTWG-ADLSGIDFDQIKYFVRSTEQQATS-WEDLPEDIKNTYDKLGI 118
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P E++ L V A ++S V +E+L++ GVIF+ A+ E+P+L K+Y
Sbjct: 119 PEAERQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFVDTDTALEEYPELFKEYF 172
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TV+P GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DE
Sbjct: 173 GTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTK
Sbjct: 233 DAYVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C + + W GS +T KYP+ + G + GE S+A + Q D+G KM H
Sbjct: 286 RTKC-EEGATMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+A T+S IVSK ++ YRG + VH A HS + +CD+LL+ + + T PY +
Sbjct: 345 MAPYTSSNIVSKSVARSGGRAAYRGLIEVHPNAHHSASQVECDALLVDSISRSDTYPYND 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N L HEAT S++S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E
Sbjct: 405 IRNDHVTLGHEATVSQVSEDQLFYLMSRGLEEDEAMAMIVRGFVEPIAKELPMEYALELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGSVG
Sbjct: 465 RLIELQMEGSVG 476
>gi|227504375|ref|ZP_03934424.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
gi|227199023|gb|EEI79071.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
Length = 481
Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats.
Identities = 202/487 (41%), Positives = 296/487 (60%), Gaps = 19/487 (3%)
Query: 6 ETVDKVRKID--VDQYKYGFETNIQVDKAP-KGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
ET +I + Y+YG+ + + +A +GL+ED++R IS KKNEP+WMLE RL A
Sbjct: 11 ETKMSDDEIISSIGGYEYGWHDSDEAGQAAHRGLSEDVVRDISEKKNEPEWMLESRLKAL 70
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R + P+W AIDFD++ Y+ Q+ DD+ ++ TY+KLGIP E+
Sbjct: 71 RIFNKKPVPTWGP-DLSAIDFDNIKYFVRSTEKQA-QTWDDLPADIKETYDKLGIPDAEK 128
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ L V A ++S V +E+L+ GVIF+ A+ E+P+++++Y TV+P
Sbjct: 129 KRLV------SGVAAQYESEVVYHKIREDLEAQGVIFVDTDTAVREYPEILQEYFGTVIP 182
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDN ++ALN+A ++ GSFVY+PKGV + L YFRIN + GQFERTLII +E +YV
Sbjct: 183 AGDNKFSALNNACWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVEEDAYVH 242
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + + LH V+E+V +Y+T+QNW +YN VT+R
Sbjct: 243 YIEGCTAPIYNSDSLHTGVIEIVVKKGGRCRYTTIQNW-------STNVYNLVTQRAKV- 294
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ W GS +T KYPSC L GE + GE S+A + Q D+G+KM+H+A T
Sbjct: 295 EEGGTMEWVDGNIGSKVTMKYPSCWLTGEHAKGEVLSLAFAGEGQVQDTGSKMVHMAPRT 354
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK ++ YRG V V+ A++S +CD+LL+ NN + T PY + +N
Sbjct: 355 SSNIVSKSVARNGGRAAYRGLVQVNANASNSTANVECDALLVDNNSRSDTYPYNDIRNDH 414
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
L HEAT S++S+E LFY + RGI EE A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 415 VTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIEL 474
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 475 QMEGSVG 481
>gi|317122849|ref|YP_004102852.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter marianensis DSM 12885]
gi|315592829|gb|ADU52125.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter marianensis DSM 12885]
Length = 466
Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats.
Identities = 201/473 (42%), Positives = 287/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+YKYGF V K+PKGL +I+ IS K+EP WM E RL A+ + P+W
Sbjct: 11 EYKYGFRDPEDYVFKSPKGLTREIVESISHYKDEPAWMREIRLKAFEIFQKKPMPTWGP- 69
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
+ F+D++YY P G +S D+V + +T+++LGIP E++ LAG V
Sbjct: 70 DLSGLRFEDIHYYIKPAERQG-RSWDEVPEYIKQTFDRLGIPEAERKFLAG-------VS 121
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V + +E+L+K GVIF A+ E+PDLV++Y TVVP DN +AALN+AV+
Sbjct: 122 AQYESEVVYHSIREDLEKQGVIFCDTDTAVKEYPDLVREYFGTVVPAEDNKFAALNTAVW 181
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSF+Y+P GVR + L YFRIN + GQFERTLII DEG++V Y+EGCTAP +
Sbjct: 182 SGGSFIYVPPGVRVEIPLQAYFRINAQNMGQFERTLIIVDEGAFVHYVEGCTAPIYSTDS 241
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LH+AVVE++ +Y+T+QNW +YN VTKR + + W G
Sbjct: 242 LHSAVVEIIVKKGGRCRYTTIQNW-------SHNVYNLVTKRAVAHEE-ATMEWVDGNIG 293
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYPS L G + + SIA + Q D+G+K++H+A +T+S +VSKGI
Sbjct: 294 SKVTMKYPSVYLLGRGAKADILSIAFAGRGQHQDAGSKVIHVAPDTSSTVVSKGICKDGG 353
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
TYRG V VH GA ++ QCD+L++ T PYIE + ++HEAT SK+S+
Sbjct: 354 IQTYRGLVQVHEGAERAKVNVQCDALILDPYSKTDTFPYIEINEDNVTIQHEATVSKVSE 413
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E LFY + RGI E+ A +IV+GF+ ++LPME+A+E +LI + +EGSVG
Sbjct: 414 EQLFYLMSRGIDEQTATTMIVSGFIEPFTKELPMEYAIEMNRLIQLEMEGSVG 466
>gi|323495956|ref|ZP_08101022.1| hypothetical protein VISI1226_14088 [Vibrio sinaloensis DSM 21326]
gi|323318991|gb|EGA71936.1| hypothetical protein VISI1226_14088 [Vibrio sinaloensis DSM 21326]
Length = 487
Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats.
Identities = 283/495 (57%), Positives = 364/495 (73%), Gaps = 14/495 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV + YK GF T + D KG+NE ++R ISAK++EP+WML++RL
Sbjct: 1 MCAVETQPEVEELFQTSHYKEGFYTQLSSDTLSKGINEQVVRAISAKRSEPEWMLQFRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD------VDPELLRTYEK 114
A+R+W M++P W + YP +D+ D YY+AP D + E+ +E+
Sbjct: 61 AFRKWQQMEEPHWLKAEYPELDYQDYSYYSAPSCASCDTDCSDDGTNEYLTKEVETAFEQ 120
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P+RE ++VAVDA+FDSVSV TT+K EL + G+IF SEAI +HP+LV+
Sbjct: 121 LGVPVRE--------GAEVAVDAIFDSVSVTTTYKNELNELGIIFCSFSEAIQQHPELVQ 172
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+YL TVVP DNF+AALN+AV +DG+FVYIPKGVRCP ELSTYFRIN+ TGQFERT++I
Sbjct: 173 QYLGTVVPPEDNFFAALNAAVASDGTFVYIPKGVRCPRELSTYFRINQAKTGQFERTILI 232
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
ADE +YVSY+EGC+AP RD QLHAAVVE++ D AE+KYSTVQNW+ G+ +GGI NF
Sbjct: 233 ADEEAYVSYIEGCSAPMRDSYQLHAAVVEVIIHDRAEVKYSTVQNWFSGEEDSQGGILNF 292
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ D+GTK
Sbjct: 293 VTKRAVCEGDHSKMSWTQSETGSAITWKYPSVILKGDYSVGEFFSVALTNGVQQADTGTK 352
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H+ K+T S I+SKGISAG S N+YRG V + A +RNFTQCDS+LIG CGAHT P
Sbjct: 353 MIHIGKHTRSTIISKGISAGKSENSYRGLVKILPNAEGARNFTQCDSMLIGTQCGAHTFP 412
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
YIE KN + +EHEATTS+I ++ LFYC+QRGI E+ AI++IVNGF ++V +LP+EFAV
Sbjct: 413 YIEVKNPTAQVEHEATTSRIGEDQLFYCVQRGISEDDAISMIVNGFCKDVFSELPLEFAV 472
Query: 475 EAQKLIDISLEGSVG 489
EAQKL+ ISLE SVG
Sbjct: 473 EAQKLLSISLEHSVG 487
>gi|295395289|ref|ZP_06805493.1| FeS assembly protein SufB [Brevibacterium mcbrellneri ATCC 49030]
gi|294971840|gb|EFG47711.1| FeS assembly protein SufB [Brevibacterium mcbrellneri ATCC 49030]
Length = 478
Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats.
Identities = 207/494 (41%), Positives = 292/494 (59%), Gaps = 21/494 (4%)
Query: 1 MVAVRETVDKVRK----IDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWML 55
M E+ + D+ Y YG+ T A +GLNED++R ISA K EP+WML
Sbjct: 1 MTDTTESNPILEMNPELKDIGNYAYGWHDTTDAGADAKRGLNEDVVRNISALKEEPEWML 60
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E RL A + + P W I+FDD+ Y+ QS +D+ ++ TY++L
Sbjct: 61 ERRLRALKLFEKKPMPHWG-ADLSGINFDDIKYFVRSTEGQA-QSWEDLPEDIKNTYDRL 118
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
GIP E++ L V A ++S V EEL++ GVIF+ + EHP++ ++
Sbjct: 119 GIPEAEKQRLV------AGVAAQYESEVVYHKINEELERQGVIFLDTDTGLKEHPEIFEE 172
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
Y TV+P GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIA
Sbjct: 173 YFGTVIPSGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIA 232
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
DEGSYV Y+EGCTAP + LH+AVVE++A +A ++Y+T+QNW +YN V
Sbjct: 233 DEGSYVHYVEGCTAPIYKSDSLHSAVVEIIAKKDARVRYTTIQNW-------SNNVYNLV 285
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR + + W GS +T KYP+ L GE + GE S+A + Q D+G KM
Sbjct: 286 TKRAIA-EEGATMEWVDGNIGSKVTMKYPAIWLTGEHAKGETLSVAFAGNGQHQDTGAKM 344
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+H A +T S IVSK ++ YRG V VH GA S N CD+LL+ N + T PY
Sbjct: 345 VHAAPHTQSSIVSKSVARNGGRAGYRGLVHVHPGAKGSSNTVLCDALLVDNISRSDTYPY 404
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
I+ + L HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E
Sbjct: 405 IDIREDDVALGHEATVSKVSEDQLFYLMSRGLDETEAMAMIVRGFVEPIARELPMEYALE 464
Query: 476 AQKLIDISLEGSVG 489
+LI++ +EG+VG
Sbjct: 465 LNRLIELQMEGAVG 478
>gi|138896579|ref|YP_001127032.1| hypothetical protein GTNG_2942 [Geobacillus thermodenitrificans
NG80-2]
gi|196249281|ref|ZP_03147979.1| FeS assembly protein SufB [Geobacillus sp. G11MC16]
gi|134268092|gb|ABO68287.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196211038|gb|EDY05799.1| FeS assembly protein SufB [Geobacillus sp. G11MC16]
Length = 465
Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats.
Identities = 211/476 (44%), Positives = 295/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ + +A +GL +++ IS KNEP WMLE+RL A + + P W
Sbjct: 7 EIGEYKYGFVDKDVSIFRAQRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++DFD++ YY P G +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSSLDFDEITYYVKPTEKSG-RSWDEVPEEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+K GVIF A+ E+ DL +++ + VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEKLGVIFKDTDSALKENEDLFREHFAKVVPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGAYCRYTTIQNWA-------NNVFNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A+ SR+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKASGSRSNIECDTLILDNQSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|302525929|ref|ZP_07278271.1| FeS assembly protein SufB [Streptomyces sp. AA4]
gi|302434824|gb|EFL06640.1| FeS assembly protein SufB [Streptomyces sp. AA4]
Length = 482
Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats.
Identities = 198/488 (40%), Positives = 297/488 (60%), Gaps = 18/488 (3%)
Query: 4 VRETVDKVRKI-DVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + I + +Y +G+ +++ A +GLNED++R ISAKK+EP+WM + RL A
Sbjct: 11 TTEPLSQEETIASLGKYAFGWADSDEAGASARRGLNEDVVRDISAKKSEPEWMRDARLKA 70
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+W IDFD++ Y+ +D+ ++ TY+KLGIP E
Sbjct: 71 LKLFDLKPMPNWG-ADLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDKLGIPEAE 128
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S V +E+L++ GV+F+ A+ EHP++ ++Y +V+
Sbjct: 129 KQRLV------AGVAAQYESEVVYHQIREDLEEQGVLFLDTDTALKEHPEIFQEYFGSVI 182
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV
Sbjct: 183 PAGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYV 242
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR C
Sbjct: 243 HYVEGCTAPIYQSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRAKC 295
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS +T KYPS L GE + GE S+A + Q D+G KM HLA +
Sbjct: 296 -EEGATMEWVDGNIGSKVTMKYPSVFLMGEHAKGEVLSVAFAGEGQHQDAGAKMEHLAPH 354
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IVSK ++ G +YRG V V + A HSR+ CD+LL+ + T PY++ +N
Sbjct: 355 TSSTIVSKSVARGGGRTSYRGLVKVAKRAHHSRSSVVCDALLVDTISRSDTYPYVDIRND 414
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S+E LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI+
Sbjct: 415 EVSMGHEATVSKVSEEQLFYLMSRGLDEAEAMAMIVRGFVEPIARELPMEYALELNRLIE 474
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 475 LQMEGSVG 482
>gi|239828239|ref|YP_002950863.1| FeS assembly protein SufB [Geobacillus sp. WCH70]
gi|239808532|gb|ACS25597.1| FeS assembly protein SufB [Geobacillus sp. WCH70]
Length = 465
Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats.
Identities = 211/476 (44%), Positives = 295/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ V +A +GL +++ IS KNEP WMLE+RL A + + P W
Sbjct: 7 EIGEYKYGFVDKDVSVFRAKRGLTREVVEEISRMKNEPQWMLEFRLKALDIFYSKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++DFD++ YY P G +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSSLDFDEITYYVKPTEKSG-RSWDEVPAEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+K GVIF A+ E+ DL ++Y + VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEKLGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPIYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LH+AVVE++ +A +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TASLHSAVVEIIVKKDAYCRYTTIQNW-------SNNVFNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVLKGEGARGLTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A+ SR+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKASGSRSNIECDTLIMDNQSSSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|331653083|ref|ZP_08354088.1| FeS assembly protein SufB [Escherichia coli M718]
gi|331049181|gb|EGI21253.1| FeS assembly protein SufB [Escherichia coli M718]
Length = 508
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEHGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|74311992|ref|YP_310411.1| cysteine desulfurase activator complex subunit SufB [Shigella
sonnei Ss046]
gi|82543947|ref|YP_407894.1| cysteine desulfurase activator complex subunit SufB [Shigella
boydii Sb227]
gi|291282813|ref|YP_003499631.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. CB9615]
gi|331642281|ref|ZP_08343416.1| FeS assembly protein SufB [Escherichia coli H736]
gi|331677554|ref|ZP_08378229.1| FeS assembly protein SufB [Escherichia coli H591]
gi|73855469|gb|AAZ88176.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81245358|gb|ABB66066.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|209769158|gb|ACI82891.1| hypothetical protein ECs2390 [Escherichia coli]
gi|209769164|gb|ACI82894.1| hypothetical protein ECs2390 [Escherichia coli]
gi|290762686|gb|ADD56647.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. CB9615]
gi|331039079|gb|EGI11299.1| FeS assembly protein SufB [Escherichia coli H736]
gi|331074014|gb|EGI45334.1| FeS assembly protein SufB [Escherichia coli H591]
Length = 508
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|169629833|ref|YP_001703482.1| putative FeS assembly protein SufB [Mycobacterium abscessus ATCC
19977]
gi|169241800|emb|CAM62828.1| Putative FeS assembly protein SufB [Mycobacterium abscessus]
Length = 475
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 198/491 (40%), Positives = 296/491 (60%), Gaps = 18/491 (3%)
Query: 1 MVAVRETVDKVRKI-DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M RE + + I + Y YG+ ++ A +GL+E ++R IS KKNEP+WML+ R
Sbjct: 1 MTLEREVLTQDETIASLGNYGYGWSDSDVAGASAQRGLSEAVVRDISGKKNEPEWMLDIR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A R + P+W IDFD++ Y+ DD+ ++ TY++LGIP
Sbjct: 61 LKALRTFDKKPMPNWGS-NLDGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTYDRLGIP 118
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E++ L V A ++S V +E+L+ GVIF+ + EHP++ K+Y
Sbjct: 119 EAEKQRLV------AGVAAQYESEVVYHQIREDLESQGVIFLDTDSGLREHPEIFKEYFG 172
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+V+P GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEG
Sbjct: 173 SVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEG 232
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
SYV Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR
Sbjct: 233 SYVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNW-------SNNVYNLVTKR 285
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ + W GS +T KYP+ + GE + GE S+A + Q D+G KMLHL
Sbjct: 286 ARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHL 344
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T+S IVSK ++ G +YRG V V++GA S + +CD+LL+ + T PY++
Sbjct: 345 APKTSSTIVSKSVARGGGRASYRGLVQVNKGAHGSHSSVKCDALLVDTISRSDTYPYVDI 404
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ + HEAT SK+S++ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +
Sbjct: 405 REDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNR 464
Query: 479 LIDISLEGSVG 489
LI++ +EG+VG
Sbjct: 465 LIELQMEGAVG 475
>gi|226330348|ref|ZP_03805866.1| hypothetical protein PROPEN_04265 [Proteus penneri ATCC 35198]
gi|225201143|gb|EEG83497.1| hypothetical protein PROPEN_04265 [Proteus penneri ATCC 35198]
Length = 500
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 284/489 (58%), Positives = 359/489 (73%), Gaps = 27/489 (5%)
Query: 19 YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
YK GF T+I D KGLNE ++R ISAK+NEP+WMLE+RL AYR WL M++P W + Y
Sbjct: 21 YKEGFYTDISTDTLEKGLNEAVVRAISAKRNEPEWMLEFRLDAYRHWLEMEEPHWLKADY 80
Query: 79 PAIDFDDLYYYAAPKSI------------------VGPQSLDDVDPELLRTYEKLGIPIR 120
P++++ D YY+AP S D + E+ + +LG+P+R
Sbjct: 81 PSLNYQDYSYYSAPSCSSCCANGSCAGGTNEAVVGDKQASQDYLTQEVEDAFNQLGVPVR 140
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E + VAVDA+FDSVSV TT++EEL + G+IF SEAI E+PDLV++YL TV
Sbjct: 141 EGQA--------VAVDAIFDSVSVSTTYREELAEHGIIFCSFSEAIQEYPDLVRQYLGTV 192
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
V DN++AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQFERT+++ADEGSY
Sbjct: 193 VSSHDNYFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAQTGQFERTILVADEGSY 252
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G GGI NFVTKR
Sbjct: 253 VSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSE-GGILNFVTKRAI 311
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C G +K+SWTQ ETGSAITWKYPS +L+G+ S EF+S+A++NG QQ D+GTKM+H+ K
Sbjct: 312 CEGENAKMSWTQSETGSAITWKYPSVILKGDNSTAEFFSVALTNGNQQADTGTKMIHIGK 371
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAG S N+YRG V V A ++RNFTQCDS+LIG CGAHT PY+E N
Sbjct: 372 NTKSTIISKGISAGKSQNSYRGLVKVLPSAKNARNFTQCDSMLIGTQCGAHTFPYVEVMN 431
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+S LEHEATTS+I ++ LFYC QRG+ E+ AI++IVNGF ++V +LP+EFAVEAQKL+
Sbjct: 432 NSAQLEHEATTSRIGEDQLFYCRQRGLSEDDAISMIVNGFCKDVFSELPLEFAVEAQKLL 491
Query: 481 DISLEGSVG 489
ISLE SVG
Sbjct: 492 AISLEHSVG 500
>gi|315648866|ref|ZP_07901961.1| FeS assembly protein SufB [Paenibacillus vortex V453]
gi|315275834|gb|EFU39186.1| FeS assembly protein SufB [Paenibacillus vortex V453]
Length = 465
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 300/476 (63%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF + + + KGL +++ IS KNEP+WMLE+RL + ++ M+ P W
Sbjct: 7 EMEEYKYGFRDEHKAIFQTGKGLTREVVMEISKIKNEPEWMLEFRLKSLEQFEKMQMPRW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLDELDFNDIQYYVRPSDKQG-KTWEEVPTEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +++L+ GVIFM A+ EHP+++++Y +TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMQKDLEDQGVIFMDTDTALREHPEILREYFATVVPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEIPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA ++Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIICKKNARVRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KM+HLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGRGAKGMVLSIAVAGKGQHQDAGAKMIHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R A ++ +CD+L++ N + TIPY E KN + LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRNAEGAKANIKCDTLILDNESTSDTIPYNEIKNDNIVLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGLSEAEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|229820827|ref|YP_002882353.1| FeS assembly protein SufB [Beutenbergia cavernae DSM 12333]
gi|229566740|gb|ACQ80591.1| FeS assembly protein SufB [Beutenbergia cavernae DSM 12333]
Length = 479
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 198/489 (40%), Positives = 294/489 (60%), Gaps = 17/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
A + Y +G+ T++ A +GL+ED++R ISA KNEP+WML+ RL
Sbjct: 7 PATEPMTQDETIASIGNYTFGWHDTDVAGATAQRGLSEDVVRNISALKNEPEWMLQRRLK 66
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A R + P+W IDFD++ Y+ +D+ ++ TY++LGIP
Sbjct: 67 ALRLFDRKPMPTWG-ADLSDIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDRLGIPEA 124
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V EEL++ GV+F+ + EHP++ ++Y +V
Sbjct: 125 EKQRLV------AGVAAQYESEVVYHQINEELERQGVLFLDTDTGLREHPEIFEEYFGSV 178
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN +AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGSY
Sbjct: 179 IPSGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSY 238
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE++ +A ++Y+T+QNW +YN VTKR
Sbjct: 239 VHYVEGCTAPIYSSDSLHSAVVEIIVKKDARVRYTTIQNW-------SNNVYNLVTKR-A 290
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 291 TAAQGATMEWIDGNIGSKVTMKYPAVYLMGEHARGETLSIAFAGADQHQDTGSKMVHMAP 350
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T+S IVSK ++ G +YRG V V GA S++ CD+LL+ + T PY++ +
Sbjct: 351 HTSSSIVSKSVARGGGRASYRGLVQVLDGAEASKSNVLCDALLVDTVSRSDTYPYVDVRE 410
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ HEAT SK+S++ LFY + RG+PE A+A+IV GFV + ++LPME+A+E +LI
Sbjct: 411 DDVEMGHEATVSKVSEDQLFYLMSRGMPETEAMAMIVRGFVEPIARELPMEYALELNRLI 470
Query: 481 DISLEGSVG 489
++ +EG+VG
Sbjct: 471 ELQMEGAVG 479
>gi|326382207|ref|ZP_08203899.1| FeS assembly protein SufB [Gordonia neofelifaecis NRRL B-59395]
gi|326198937|gb|EGD56119.1| FeS assembly protein SufB [Gordonia neofelifaecis NRRL B-59395]
Length = 478
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 196/489 (40%), Positives = 297/489 (60%), Gaps = 18/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
A + T ++ D+Y YG+ + A +GL+E ++R ISAKKNEP+WMLE RL
Sbjct: 7 AATQLTQEETIA-SFDRYGYGWSDSDEAGASAKRGLSEAVVRDISAKKNEPEWMLEQRLK 65
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A R + PSW IDFD++ Y+ +S +++ ++ TY++LGIP
Sbjct: 66 ALRIFDRKPMPSWGG-DLDGIDFDNIKYFVRSTEKQA-ESWEELPEDIKNTYDRLGIPEA 123
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V +E+L++ GVIF+ + EHP++ ++Y +V
Sbjct: 124 EKQRLV------AGVAAQYESEVVYHQIREDLEEKGVIFLDTDTGLKEHPEIFQEYFGSV 177
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN ++ALN++V++ GSF+Y+P GV + L YFRIN + GQFERTLII DE +Y
Sbjct: 178 IPAGDNKFSALNTSVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY 237
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE+V +Y+T+QNW +YN VTKR
Sbjct: 238 VHYVEGCTAPIYKSDSLHSAVVEIVVKKGGRCRYTTIQNW-------SNNVYNLVTKRAK 290
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W GS +T KYP+ L GE + GE S+A + Q D+G+KM+HLA
Sbjct: 291 A-EEGATMEWIDGNIGSKVTMKYPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAP 349
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT+S IVSK ++ G ++YRG + ++ GA SR+ QCD+LL+ + T PY++ +
Sbjct: 350 NTSSNIVSKSVARGGGRSSYRGLIKINPGAHGSRSTVQCDALLVDQISRSDTYPYVDIRE 409
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ HEAT SK+SD+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI
Sbjct: 410 DDVTMGHEATVSKVSDDQLFYLMSRGMTEQEAMAMVVRGFVEPIAKELPMEYALELNRLI 469
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 470 ELQMEGSVG 478
>gi|283458125|ref|YP_003362741.1| Fe-S cluster assembly ABC transporter permease [Rothia mucilaginosa
DY-18]
gi|283134156|dbj|BAI64921.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Rothia mucilaginosa DY-18]
Length = 532
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 199/490 (40%), Positives = 302/490 (61%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ E ++ +++ + Y+YG+ +++ A +GL+ED++R ISAKKNEP WML+ RL
Sbjct: 59 TVISEILEMNPELEGIGNYEYGWADSDEAGQVAKRGLDEDVVRDISAKKNEPQWMLDMRL 118
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + + P+W IDFD++ Y+ +++ ++ TYE+LGIP
Sbjct: 119 KALKFFERKPMPTWG-ADLSEIDFDNIKYFVRSTEGQAAS-WEELPEDIRTTYERLGIPE 176
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L V A ++S V +E+L++ GVIF+ + E+P+L K+Y +
Sbjct: 177 AERNSLV------AGVAAQYESEVVYHQIREDLEQQGVIFVDTDTGLREYPELFKEYFGS 230
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++P+GDN ++ALN+AV++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGS
Sbjct: 231 IIPIGDNKFSALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGS 290
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V NA ++Y+T+QNW +YN VTKR
Sbjct: 291 YVHYIEGCTAPIYKSDSLHSAVVEIVLKKNARVRYTTIQNW-------SNNVYNLVTKRA 343
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ + GE + GE SIA + Q D+G+KM+H+A
Sbjct: 344 VAH-EGATMEWVDGNIGSKVTQKYPAVYMVGEHAKGETLSIAFAGEGQHQDTGSKMVHIA 402
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ + YRG V V GA HS++ CD+LL+ + T PY++ +
Sbjct: 403 PNTSSTIVSKSVARNGGRSAYRGLVQVREGAKHSKSSVVCDALLVDTISRSDTYPYVDVR 462
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT S++S++ LFY +QRG+ EE A+A+IV GFV + ++LPME+A+E +L
Sbjct: 463 EDDVTMGHEATVSRVSEDQLFYLMQRGLSEEEAMAMIVRGFVEPIARELPMEYALELNRL 522
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 523 IELQMEGSVG 532
>gi|228999754|ref|ZP_04159328.1| hypothetical protein bmyco0003_43070 [Bacillus mycoides Rock3-17]
gi|228759961|gb|EEM08933.1| hypothetical protein bmyco0003_43070 [Bacillus mycoides Rock3-17]
Length = 465
Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKNAYCRYTTIQNWA-------NNVYNLVTKRAVCEA-NATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKATNSRSNIECDTLIMDNQSTSDTIPYNEIKNDHVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|13361857|dbj|BAB35813.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209769160|gb|ACI82892.1| hypothetical protein ECs2390 [Escherichia coli]
gi|209769162|gb|ACI82893.1| hypothetical protein ECs2390 [Escherichia coli]
gi|209769166|gb|ACI82895.1| hypothetical protein ECs2390 [Escherichia coli]
Length = 508
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPELVRKYLGTVVPGNDNFFAALNAAVVSDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|254821669|ref|ZP_05226670.1| hypothetical protein MintA_17167 [Mycobacterium intracellulare ATCC
13950]
Length = 482
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 296/475 (62%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R IS KK+EP+WML+ RL A R + P+W
Sbjct: 24 LGRYGYGWADSDVAGASAQRGLSEAVVRDISEKKSEPEWMLQARLKALRIFERKPMPTWG 83
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDF+++ Y+ DD+ ++ TY++LGIP E++ L G
Sbjct: 84 S-NLEGIDFENIKYFVRSTEKQAAT-WDDLPEDIRNTYDRLGIPEAEKQRLVG------G 135
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHP++ ++Y TV+P GDN ++ALN+A
Sbjct: 136 VAAQYESEVVYHQIREDLEAQGVIFVDTDTGLREHPEIFQEYFGTVIPAGDNKFSALNTA 195
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 196 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYKS 255
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA ++Y+T+QNW +YN VTKR + + W
Sbjct: 256 DSLHSAVVEIIVKPNARVRYTTIQNW-------SNNVYNLVTKRARAEA-GATMEWVDGN 307
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S IVSK ++ G
Sbjct: 308 IGSKVTMKYPAVWMTGEYAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARG 367
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 368 GGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 427
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 428 SEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|324113448|gb|EGC07423.1| FeS assembly protein SufB [Escherichia fergusonii B253]
Length = 495
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCTSEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|308186666|ref|YP_003930797.1| Iron-sulfur cluster biosynthesis protein sufB [Pantoea vagans C9-1]
gi|308057176|gb|ADO09348.1| Iron-sulfur cluster biosynthesis protein sufB [Pantoea vagans C9-1]
Length = 497
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 294/506 (58%), Positives = 372/506 (73%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET D V+ + YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSRHSETSDDVQIWEGKLNYKEGFFTQLQTEEFANGINEDVVRAISAKRNEPEWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DD 103
A+R WL M++P W + Y +D+ D YY+AP + D
Sbjct: 61 KAFRAWLEMEEPHWLKAHYEKLDYQDYSYYSAPSCGNCDDTCASEPGVTQASGSAPASDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + +LG+P+RE +VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 121 LTQEVENAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYRGKLAEQGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI EHP+LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIQEHPELVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PG
Sbjct: 233 KTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
G+GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A++
Sbjct: 293 GE-GEGGILNFVTKRALCEGDHSKMSWTQSETGSAITWKYPSCILRGDYSVGEFYSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG +CGAHT PY+E++N++ LEHEATTS+I ++ +FYCLQRGI EE AI++IVNGF ++
Sbjct: 412 IGPDCGAHTFPYVETRNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|183598854|ref|ZP_02960347.1| hypothetical protein PROSTU_02286 [Providencia stuartii ATCC 25827]
gi|188021061|gb|EDU59101.1| hypothetical protein PROSTU_02286 [Providencia stuartii ATCC 25827]
Length = 499
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 288/501 (57%), Positives = 369/501 (73%), Gaps = 25/501 (4%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D+V+ ++ +YK GF TN+ D+ KG+NED++R ISAK+NEP+WML++RL AY
Sbjct: 7 EIGDEVQSWLNDQRYKEGFFTNVATDEMAKGINEDVVRAISAKRNEPEWMLKFRLDAYHH 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DDVDPEL 108
W M++P W + YP +D+ D YY+AP S + + E+
Sbjct: 67 WKGMEEPHWLKAHYPNLDYQDYSYYSAPSCGSCDDSCGSQSGAKQGTGVTETNNYLTAEV 126
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +LG+P+RE + VAVDA+FDSVSV TT++++L K G+IF SEAI E
Sbjct: 127 EEAFNQLGVPVREGKA--------VAVDAIFDSVSVSTTYRDDLAKHGIIFCSFSEAIQE 178
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+P+LV+KYL TVV DNF+AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQF
Sbjct: 179 YPELVQKYLGTVVSSHDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQF 238
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
ERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 239 ERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSEA 298
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ
Sbjct: 299 GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILKGDNSVGEFFSVALTNGNQQ 358
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG C
Sbjct: 359 ADTGTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKILPSAHNARNFTQCDSMLIGTQC 418
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
GAHT PY+E KN++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +L
Sbjct: 419 GAHTFPYVEVKNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSEL 478
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
P+EFAVEAQKL+ ISLE SVG
Sbjct: 479 PLEFAVEAQKLLAISLEHSVG 499
>gi|227833040|ref|YP_002834747.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|262182472|ref|ZP_06041893.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|227454056|gb|ACP32809.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
Length = 481
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 202/487 (41%), Positives = 296/487 (60%), Gaps = 19/487 (3%)
Query: 6 ETVDKVRKID--VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
ET +I + Y+YG+ +++ A +GL+ED++R IS KKNEP+WMLE RL A
Sbjct: 11 ETKMSDDEIISSIGGYEYGWRDSDEAGQAAHRGLSEDVVRDISKKKNEPEWMLESRLKAL 70
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R + P+W IDFD++ Y+ Q+ DD+ ++ TY+KLGIP E+
Sbjct: 71 RVFNKKPVPTWGP-DLSGIDFDNIKYFVRSTEKQA-QTWDDLPDDIKETYDKLGIPDAEK 128
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ L V A ++S V +E+L+ GVIF+ A+ E+P+++++Y TV+P
Sbjct: 129 KRLV------SGVAAQYESEVVYHKIREDLEAQGVIFVDTDTAVREYPEILQEYFGTVIP 182
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDN ++ALN+A ++ GSFVY+PKGV + L YFRIN + GQFERTLII +EG+YV
Sbjct: 183 AGDNKFSALNNACWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVEEGAYVH 242
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + + LH V+E++ +Y+T+QNW +YN VT+R
Sbjct: 243 YIEGCTAPIYNSDSLHTGVIEIIVKKGGRCRYTTIQNW-------STNVYNLVTQRAKV- 294
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ W GS +T KYPSC L GE + GE S+A + Q D+G+KM+H+A NT
Sbjct: 295 EEGGTMEWVDGNIGSKVTMKYPSCWLTGEHAKGEVLSLAFAADNQVQDTGSKMVHMAPNT 354
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK ++ YRG V V+ A +S +CD+LL+ NN + T PY + +N
Sbjct: 355 SSNIVSKSVARNGGRAAYRGLVQVNANATNSTANVECDALLVDNNSRSDTYPYNDIRNDH 414
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
L HEAT S++S+E LFY + RGI EE A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 415 VTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIEL 474
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 475 QMEGSVG 481
>gi|119963028|ref|YP_947848.1| FeS assembly protein SufB [Arthrobacter aurescens TC1]
gi|119949887|gb|ABM08798.1| FeS assembly protein SufB [Arthrobacter aurescens TC1]
Length = 487
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 204/490 (41%), Positives = 299/490 (61%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ E ++K ++ + Y+YG+ V A +GLNE+++R IS+KKNEP+WML+ RL
Sbjct: 14 TVISEILEKNPELHGIGNYEYGWADKNDVGANARRGLNEEVVRDISSKKNEPEWMLDLRL 73
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +D+ ++ TYEKLGIP
Sbjct: 74 KGLKYFDRKPMPTWG-ADLSGIDFDNIKYFVRSTEKQAAT-WEDLPEDIRNTYEKLGIPE 131
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L V A ++S V +E+L+ GVIF+ A+ EHP++ ++Y T
Sbjct: 132 AERSRLV------SGVAAQYESEVVYHQIREDLEAQGVIFLDTDTALREHPEIFQEYFGT 185
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++PVGDN +A+LN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE S
Sbjct: 186 IIPVGDNKFASLNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEDS 245
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A ++Y+T+QNW +YN VTKR
Sbjct: 246 YVHYIEGCTAPIYTSDSLHSAVVEIIVKKGARVRYTTIQNW-------STNVYNLVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 299 IC-EEGATMEWIDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKMVHIA 357
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT S I+SK ++ G YRG V V GA HS N +CD+LL+ + T PYI+ +
Sbjct: 358 PNTKSSIISKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPYIDIR 417
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT S++S+E LFY + RG+PE+ A+A+IV GF+ + ++LPME+A+E +L
Sbjct: 418 EDDVVMGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALELNRL 477
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 478 IELQMEGSVG 487
>gi|301647866|ref|ZP_07247648.1| FeS assembly protein SufB [Escherichia coli MS 146-1]
gi|301074007|gb|EFK88813.1| FeS assembly protein SufB [Escherichia coli MS 146-1]
Length = 495
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTRTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|170683248|ref|YP_001743571.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli SMS-3-5]
gi|170520966|gb|ACB19144.1| FeS assembly protein SufB [Escherichia coli SMS-3-5]
Length = 495
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKG+SAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGVSAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|30063197|ref|NP_837368.1| cysteine desulfurase activator complex subunit SufB [Shigella
flexneri 2a str. 2457T]
gi|89108523|ref|AP_002303.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
W3110]
gi|90111315|ref|NP_416198.2| component of SufBCD complex [Escherichia coli str. K-12 substr.
MG1655]
gi|110805660|ref|YP_689180.1| cysteine desulfurase activator complex subunit SufB [Shigella
flexneri 5 str. 8401]
gi|157161148|ref|YP_001458466.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli HS]
gi|168789817|ref|ZP_02814824.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC869]
gi|170019967|ref|YP_001724921.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli ATCC 8739]
gi|170081343|ref|YP_001730663.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|193065269|ref|ZP_03046341.1| FeS assembly protein SufB [Escherichia coli E22]
gi|194429489|ref|ZP_03062011.1| FeS assembly protein SufB [Escherichia coli B171]
gi|194434803|ref|ZP_03067053.1| FeS assembly protein SufB [Shigella dysenteriae 1012]
gi|194438532|ref|ZP_03070621.1| FeS assembly protein SufB [Escherichia coli 101-1]
gi|209918997|ref|YP_002293081.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli SE11]
gi|218548731|ref|YP_002382522.1| cysteine desulfurase activator complex subunit SufB [Escherichia
fergusonii ATCC 35469]
gi|218554249|ref|YP_002387162.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli IAI1]
gi|238900898|ref|YP_002926694.1| component of SufBCD complex [Escherichia coli BW2952]
gi|254161744|ref|YP_003044852.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli B str. REL606]
gi|256022654|ref|ZP_05436519.1| cysteine desulfurase activator complex subunit SufB [Escherichia
sp. 4_1_40B]
gi|260843989|ref|YP_003221767.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|261227872|ref|ZP_05942153.1| component of SufBCD complex [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258394|ref|ZP_05950927.1| component of SufBCD complex [Escherichia coli O157:H7 str. FRIK966]
gi|293446057|ref|ZP_06662479.1| FeS assembly protein SufB [Escherichia coli B088]
gi|300821444|ref|ZP_07101591.1| FeS assembly protein SufB [Escherichia coli MS 119-7]
gi|300904534|ref|ZP_07122373.1| FeS assembly protein SufB [Escherichia coli MS 84-1]
gi|300918053|ref|ZP_07134674.1| FeS assembly protein SufB [Escherichia coli MS 115-1]
gi|300930847|ref|ZP_07146217.1| FeS assembly protein SufB [Escherichia coli MS 187-1]
gi|300951275|ref|ZP_07165124.1| FeS assembly protein SufB [Escherichia coli MS 116-1]
gi|300958564|ref|ZP_07170694.1| FeS assembly protein SufB [Escherichia coli MS 175-1]
gi|301027872|ref|ZP_07191173.1| FeS assembly protein SufB [Escherichia coli MS 196-1]
gi|301303198|ref|ZP_07209324.1| FeS assembly protein SufB [Escherichia coli MS 124-1]
gi|307138342|ref|ZP_07497698.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli H736]
gi|312969708|ref|ZP_07783891.1| feS assembly protein SufB [Escherichia coli 1827-70]
gi|8176555|sp|P77522|SUFB_ECOLI RecName: Full=FeS cluster assembly protein sufB
gi|30041449|gb|AAP17177.1| hypothetical protein S1845 [Shigella flexneri 2a str. 2457T]
gi|85675075|dbj|BAA15454.2| component of SufBCD complex [Escherichia coli str. K12 substr.
W3110]
gi|87081955|gb|AAC74753.2| component of SufBCD complex [Escherichia coli str. K-12 substr.
MG1655]
gi|110615208|gb|ABF03875.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|157066828|gb|ABV06083.1| FeS assembly protein SufB [Escherichia coli HS]
gi|169754895|gb|ACA77594.1| FeS assembly protein SufB [Escherichia coli ATCC 8739]
gi|169889178|gb|ACB02885.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|189370626|gb|EDU89042.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC869]
gi|192927063|gb|EDV81685.1| FeS assembly protein SufB [Escherichia coli E22]
gi|194412453|gb|EDX28753.1| FeS assembly protein SufB [Escherichia coli B171]
gi|194416972|gb|EDX33091.1| FeS assembly protein SufB [Shigella dysenteriae 1012]
gi|194422542|gb|EDX38540.1| FeS assembly protein SufB [Escherichia coli 101-1]
gi|209912256|dbj|BAG77330.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218356272|emb|CAQ88890.1| component of SufBCD complex [Escherichia fergusonii ATCC 35469]
gi|218361017|emb|CAQ98592.1| component of SufBCD complex [Escherichia coli IAI1]
gi|238860171|gb|ACR62169.1| component of SufBCD complex [Escherichia coli BW2952]
gi|253973645|gb|ACT39316.1| component of SufBCD complex [Escherichia coli B str. REL606]
gi|257759136|dbj|BAI30633.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|260449194|gb|ACX39616.1| FeS assembly protein SufB [Escherichia coli DH1]
gi|281601120|gb|ADA74104.1| FeS assembly protein SufB [Shigella flexneri 2002017]
gi|291322887|gb|EFE62315.1| FeS assembly protein SufB [Escherichia coli B088]
gi|299879028|gb|EFI87239.1| FeS assembly protein SufB [Escherichia coli MS 196-1]
gi|300314773|gb|EFJ64557.1| FeS assembly protein SufB [Escherichia coli MS 175-1]
gi|300403528|gb|EFJ87066.1| FeS assembly protein SufB [Escherichia coli MS 84-1]
gi|300414744|gb|EFJ98054.1| FeS assembly protein SufB [Escherichia coli MS 115-1]
gi|300449456|gb|EFK13076.1| FeS assembly protein SufB [Escherichia coli MS 116-1]
gi|300461322|gb|EFK24815.1| FeS assembly protein SufB [Escherichia coli MS 187-1]
gi|300525947|gb|EFK47016.1| FeS assembly protein SufB [Escherichia coli MS 119-7]
gi|300841607|gb|EFK69367.1| FeS assembly protein SufB [Escherichia coli MS 124-1]
gi|309701908|emb|CBJ01220.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|310337993|gb|EFQ03082.1| feS assembly protein SufB [Escherichia coli 1827-70]
gi|313648965|gb|EFS13402.1| feS assembly protein SufB [Shigella flexneri 2a str. 2457T]
gi|315136324|dbj|BAJ43483.1| cysteine desulfurase activator complex subunitSufB [Escherichia
coli DH1]
gi|315257514|gb|EFU37482.1| FeS assembly protein SufB [Escherichia coli MS 85-1]
gi|315618878|gb|EFU99461.1| feS assembly protein SufB [Escherichia coli 3431]
gi|320175144|gb|EFW50255.1| Iron-sulfur cluster assembly protein SufB [Shigella dysenteriae CDC
74-1112]
gi|320181291|gb|EFW56210.1| Iron-sulfur cluster assembly protein SufB [Shigella boydii ATCC
9905]
gi|320184434|gb|EFW59242.1| Iron-sulfur cluster assembly protein SufB [Shigella flexneri CDC
796-83]
gi|320641898|gb|EFX11266.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. G5101]
gi|320647354|gb|EFX16162.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H- str. 493-89]
gi|320652648|gb|EFX20917.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H- str. H 2687]
gi|320653033|gb|EFX21229.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320658717|gb|EFX26394.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O55:H7 str. USDA 5905]
gi|320668707|gb|EFX35512.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. LSU-61]
gi|323163467|gb|EFZ49293.1| feS assembly protein SufB [Escherichia coli E128010]
gi|323169996|gb|EFZ55652.1| feS assembly protein SufB [Escherichia coli LT-68]
gi|323937286|gb|EGB33565.1| FeS assembly protein SufB [Escherichia coli E1520]
gi|323940650|gb|EGB36841.1| FeS assembly protein SufB [Escherichia coli E482]
gi|323948022|gb|EGB44014.1| FeS assembly protein SufB [Escherichia coli H120]
gi|323962174|gb|EGB57769.1| FeS assembly protein SufB [Escherichia coli H489]
gi|323973938|gb|EGB69110.1| FeS assembly protein SufB [Escherichia coli TA007]
gi|324007047|gb|EGB76266.1| FeS assembly protein SufB [Escherichia coli MS 57-2]
gi|324016513|gb|EGB85732.1| FeS assembly protein SufB [Escherichia coli MS 117-3]
gi|324119167|gb|EGC13055.1| FeS assembly protein SufB [Escherichia coli E1167]
gi|332090823|gb|EGI95915.1| feS assembly protein SufB [Shigella boydii 5216-82]
gi|332093895|gb|EGI98948.1| feS assembly protein SufB [Shigella dysenteriae 155-74]
gi|332095979|gb|EGJ00984.1| feS assembly protein SufB [Shigella boydii 3594-74]
gi|332343402|gb|AEE56736.1| feS assembly protein SufB [Escherichia coli UMNK88]
gi|332757003|gb|EGJ87346.1| feS assembly protein SufB [Shigella flexneri 4343-70]
gi|332757792|gb|EGJ88121.1| feS assembly protein SufB [Shigella flexneri 2747-71]
gi|332758524|gb|EGJ88845.1| feS assembly protein SufB [Shigella flexneri K-671]
gi|332766889|gb|EGJ97089.1| feS assembly protein SufB [Shigella flexneri 2930-71]
gi|333003806|gb|EGK23342.1| feS assembly protein SufB [Shigella flexneri VA-6]
gi|333003983|gb|EGK23518.1| feS assembly protein SufB [Shigella flexneri K-218]
gi|333017957|gb|EGK37262.1| feS assembly protein SufB [Shigella flexneri K-304]
Length = 495
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|212640282|ref|YP_002316802.1| cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
gi|212561762|gb|ACJ34817.1| Cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
Length = 478
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 215/495 (43%), Positives = 300/495 (60%), Gaps = 23/495 (4%)
Query: 1 MVAVRETVDKVRKI-----DVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWM 54
M + ++ ++ +YKYGF + ++ V +A +GL +I+ IS KNEP WM
Sbjct: 1 MSNKASHKKEANEMAKKMPEIGEYKYGFADKDVSVFRAERGLTREIVEEISRMKNEPKWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
LE+RL A + +M P W ++DFD++ YY P G +S D+V E+ T++K
Sbjct: 61 LEFRLKALDIFYSMPMPQWGG-DLSSLDFDEITYYVKPSEKSG-RSWDEVPEEIKATFDK 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LGIP EQ+ LAG V A ++S V KE+L+K GVIF A+ E+ DL +
Sbjct: 119 LGIPEAEQKYLAG-------VSAQYESEVVYHNMKEDLEKLGVIFKDTDSALKENEDLFR 171
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
++ + VVP DN +AALNSAV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII
Sbjct: 172 EHWAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLII 231
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
DEG++V Y+EGCTAP N LH+AVVE++ A +Y+T+QNW ++N
Sbjct: 232 VDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIVKKGAYCRYTTIQNWA-------NNVFNL 284
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VTKR C + + W GS +T KYP+ +L+GE + G SIAI+ Q D+G K
Sbjct: 285 VTKRAVC-EENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAK 343
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+HLA NT+S IVSK IS TYRG V R A SR+ +CD+L++ N + TIP
Sbjct: 344 MIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKADGSRSNIECDTLIMDNQSTSDTIP 403
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E N + +LEHEA SK+S+E LFY + RGI E+ A +IV GF+ ++LPME+AV
Sbjct: 404 YNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAV 463
Query: 475 EAQKLIDISLEGSVG 489
E +LI +EGS+G
Sbjct: 464 EMNRLIKFEMEGSIG 478
>gi|312139627|ref|YP_004006963.1| fe-s cluster assembly protein sufb [Rhodococcus equi 103S]
gi|311888966|emb|CBH48279.1| Fe-S cluster assembly protein SufB [Rhodococcus equi 103S]
Length = 481
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 290/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ ++ A +GL+ED++R ISAKKNEPDWML+ RL A R + P W
Sbjct: 23 LGNYEYGWADADVAGASAQRGLSEDVVRDISAKKNEPDWMLDIRLKALRTFDKKPMPHWG 82
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +S +D+ ++ TY+KLGIP E++ L
Sbjct: 83 S-NLDGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPEAEKQRLI------AG 134
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHP+L ++Y TV+P GDN ++ALN+A
Sbjct: 135 VAAQYESEVVYHQIREDLEAQGVIFLDTDSGLREHPELFREYFGTVIPAGDNKFSALNTA 194
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 195 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR S + W
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNW-------SNNVYNLVTKRTKVEAGGS-MEWIDGN 306
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA +T+S IVSK ++ G
Sbjct: 307 IGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKSVARG 366
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA S+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 367 GGRASYRGLVQVNKGAHGSKATVKCDALLVDQISRSDTYPYVDVREDDVTMGHEATVSKV 426
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 427 SDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 481
>gi|331663161|ref|ZP_08364071.1| FeS assembly protein SufB [Escherichia coli TA143]
gi|331058960|gb|EGI30937.1| FeS assembly protein SufB [Escherichia coli TA143]
Length = 495
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGALQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|288935005|ref|YP_003439064.1| FeS assembly protein SufB [Klebsiella variicola At-22]
gi|290509066|ref|ZP_06548437.1| FeS assembly protein SufB [Klebsiella sp. 1_1_55]
gi|288889714|gb|ADC58032.1| FeS assembly protein SufB [Klebsiella variicola At-22]
gi|289778460|gb|EFD86457.1| FeS assembly protein SufB [Klebsiella sp. 1_1_55]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 287/504 (56%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T +Q D+ KG+NE+++R ISA++NEP WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTRLQTDELAKGINEEVVRAISARRNEPQWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A+R WL M++P W + Y +++ D YY+AP ++
Sbjct: 61 LNAFRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANTFLT 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ + +LG+P+RE +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 SEVEEAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVKKYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEF+S+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V
Sbjct: 412 PDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|224475955|ref|YP_002633561.1| putative FeS assembly protein SufB [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420562|emb|CAL27376.1| putative FeS assembly protein SufB [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 465
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 212/476 (44%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+ IS K EP WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P +S D+V E+ RT+++LGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKPSEH-AERSWDEVPEEIKRTFDRLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +EEL++ GVIF A+ EH +L K+Y ++VVP GDN +AALNS
Sbjct: 119 -VSAQYESEVVYQNMEEELEEKGVIFKDTDSALREHEELFKEYFASVVPAGDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE+ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TNSLHSAVVEIFVHKDAHVRYTTIQNWA-------NNVYNLVTKRTMVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLAGEGAKGSTLSIALAGKGQVQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 DGGKVVYRGIVKFGRKAKGARANIECDTLILDNKSTSDTIPYNEIMNDDISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|313903388|ref|ZP_07836780.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter subterraneus DSM 13965]
gi|313466476|gb|EFR61998.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter subterraneus DSM 13965]
Length = 466
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 201/474 (42%), Positives = 286/474 (60%), Gaps = 18/474 (3%)
Query: 17 DQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+YKYGF K+PKGL +I+ IS KNEPDWM + RL A+ + P+W
Sbjct: 10 QEYKYGFRDPENYVFKSPKGLTREIVESISHYKNEPDWMRQIRLHAFEVFEKKPMPTWGP 69
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+ F+D++YY P G +S D+V + RT+++LGIP E++ LAG V
Sbjct: 70 -DLSGLRFEDIHYYIKPAERQG-RSWDEVPEYIKRTFDRLGIPEAERKFLAG-------V 120
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A ++S V + +E+L+K GVIF A+ E+PDLV++Y TVVP DN +AALN+AV
Sbjct: 121 SAQYESEVVYHSIREDLEKQGVIFCDTDTAVKEYPDLVREYFGTVVPAEDNKFAALNTAV 180
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSF+Y+P GVR + L YFRIN + GQFERTLII DEG++V Y+EGCTAP +
Sbjct: 181 WSGGSFIYVPPGVRVDIPLQAYFRINAQNMGQFERTLIIVDEGAFVHYVEGCTAPIYSTD 240
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 241 SLHSAVVEIIVKKGGRCRYTTIQNW-------SHNVYNLVTKRAVAYEE-ATMEWVDGNI 292
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L G + + SIA + Q D+G+K++H A +T+S +VSKGI
Sbjct: 293 GSKVTMKYPSVYLLGRGAKADILSIAFAGRGQHQDAGSKVIHAAPDTSSTVVSKGICKDG 352
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+YRG V VH GA ++ QCD+L++ T PYIE + ++HEAT SK+S
Sbjct: 353 GIQSYRGLVQVHEGAERAKVNVQCDALILDPYSRTDTFPYIEINEDNVTIQHEATVSKVS 412
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+E LFY + RGI E+ A +IV+GF+ ++LPME+A+E +LI + +EGSVG
Sbjct: 413 EEQLFYLMSRGIDEQTATTMIVSGFIEPFTKELPMEYAIEMNRLIQLEMEGSVG 466
>gi|323968450|gb|EGB63856.1| FeS assembly protein SufB [Escherichia coli M863]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ + YY+AP +
Sbjct: 61 LKAYRAWLEMEEPHWLKAHYDKLNYQEYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|152970689|ref|YP_001335798.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|330012602|ref|ZP_08307437.1| FeS assembly protein SufB [Klebsiella sp. MS 92-3]
gi|150955538|gb|ABR77568.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328533761|gb|EGF60450.1| FeS assembly protein SufB [Klebsiella sp. MS 92-3]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 287/504 (56%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T +Q D+ KG+NE+++R ISA++NEP WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTRLQTDELAKGINEEVVRAISARRNEPQWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP ++
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANTFLT 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ + +LG+P+RE +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 SEVEEAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVKKYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEF+S+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V
Sbjct: 412 PDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|120403717|ref|YP_953546.1| FeS assembly protein SufB [Mycobacterium vanbaalenii PYR-1]
gi|119956535|gb|ABM13540.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium vanbaalenii PYR-1]
Length = 479
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 194/475 (40%), Positives = 294/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKK+EP+WML+ RL A R + P+W
Sbjct: 21 LGKYGYGWADSDVAGASAQRGLSEAVVRDISAKKSEPEWMLDIRLKALRTFDKKPMPNWG 80
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY+KLGIP E++ L
Sbjct: 81 S-NLDGIDFDNIKYFVRSSEKQAAT-WDDLPADIKNTYDKLGIPEAEKQRLV------SG 132
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V + +E+L+ GVIF+ A+ EHP+L K+Y TV+P GDN ++ALN+A
Sbjct: 133 VAAQYESEVVYHSIREDLEAQGVIFLDTDTALKEHPELFKQYFGTVIPAGDNKFSALNTA 192
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 193 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKS 252
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW ++N VTKR + + W
Sbjct: 253 DSLHSAVVEIIVKPGGRCRYTTIQNW-------SNNVFNLVTKRARAEA-GATMEWVDGN 304
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S IVSK ++ G
Sbjct: 305 IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPNTSSNIVSKSVARG 364
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 365 GGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 424
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ +FY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 425 SEDQMFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 479
>gi|327252800|gb|EGE64454.1| feS assembly protein SufB [Escherichia coli STEC_7v]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ + YY+AP +
Sbjct: 61 LKAYRAWLEMEEPHWLKAHYDKLNYQEYSYYSAPSCGNCDDTCASEPGAVQQTGANSFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|262044174|ref|ZP_06017246.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038471|gb|EEW39670.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 286/504 (56%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T +Q D+ KG+NE+++R ISA++NEP WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTRLQTDELAKGINEEVVRAISARRNEPQWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP ++
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANTFLT 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ + +LG+P+RE +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 SEVEEAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVKKYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK++WTQ ETGSAITWKYPSC+LRG+ S GEF+S+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMTWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V
Sbjct: 412 PDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|218705181|ref|YP_002412700.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli UMN026]
gi|293405181|ref|ZP_06649173.1| sufB [Escherichia coli FVEC1412]
gi|293409996|ref|ZP_06653572.1| FeS assembly protein SufB [Escherichia coli B354]
gi|298380824|ref|ZP_06990423.1| sufB [Escherichia coli FVEC1302]
gi|300898536|ref|ZP_07116869.1| FeS assembly protein SufB [Escherichia coli MS 198-1]
gi|301026913|ref|ZP_07190309.1| FeS assembly protein SufB [Escherichia coli MS 69-1]
gi|218432278|emb|CAR13168.1| component of SufBCD complex [Escherichia coli UMN026]
gi|284921604|emb|CBG34676.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
gi|291427389|gb|EFF00416.1| sufB [Escherichia coli FVEC1412]
gi|291470464|gb|EFF12948.1| FeS assembly protein SufB [Escherichia coli B354]
gi|298278266|gb|EFI19780.1| sufB [Escherichia coli FVEC1302]
gi|300357800|gb|EFJ73670.1| FeS assembly protein SufB [Escherichia coli MS 198-1]
gi|300395260|gb|EFJ78798.1| FeS assembly protein SufB [Escherichia coli MS 69-1]
gi|323978180|gb|EGB73266.1| FeS assembly protein SufB [Escherichia coli TW10509]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|304397637|ref|ZP_07379514.1| FeS assembly protein SufB [Pantoea sp. aB]
gi|304354809|gb|EFM19179.1| FeS assembly protein SufB [Pantoea sp. aB]
Length = 497
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 295/506 (58%), Positives = 372/506 (73%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET D V+ + YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSRHSETSDDVQIWEGKLNYKEGFFTQLQTEEFANGINEDVVRAISAKRNEPEWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DD 103
A+R WL M++P W + Y +D+ D YY+AP S D
Sbjct: 61 KAFRAWLEMEEPHWLKAHYEKLDYQDYSYYSAPSCGNCDDSCASEPGAMQASGSAPASDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + +LG+P+RE +VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 121 LTQEVENAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYRGKLAEQGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI EHP+LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIQEHPELVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PG
Sbjct: 233 KTGQFERTILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
G+GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A++
Sbjct: 293 GE-GEGGILNFVTKRALCEGDHSKMSWTQSETGSAITWKYPSCILRGDYSVGEFYSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG +CGAHT PY+E++N++ LEHEATTS+I ++ +FYCLQRGI EE AI++IVNGF ++
Sbjct: 412 IGPDCGAHTFPYVETRNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|218699752|ref|YP_002407381.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli IAI39]
gi|218369738|emb|CAR17509.1| component of SufBCD complex [Escherichia coli IAI39]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+I EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIILCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKG+SAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGVSAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|319957062|ref|YP_004168325.1| iron-regulated ABC transporter membrane component sufb
[Nitratifractor salsuginis DSM 16511]
gi|319419466|gb|ADV46576.1| Iron-regulated ABC transporter membrane component SufB
[Nitratifractor salsuginis DSM 16511]
Length = 478
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 306/481 (63%), Positives = 387/481 (80%), Gaps = 6/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ K +Y GFE +I+ DK P GL+E++IR+IS KK+EPDWM E RL AYR+WL M
Sbjct: 4 EELDKAVSGEYALGFEIDIEEDKVPPGLSEEVIRYISKKKDEPDWMTELRLKAYRKWLEM 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
++P W + Y ID+ + Y+AAPK GP+SLD+VDP++L YEKLGIP+ EQ+ LAGV
Sbjct: 64 EEPHWGHLEYEPIDYQSISYFAAPK--KGPESLDEVDPKILEAYEKLGIPLEEQKQLAGV 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
+ + AV VSV TT++EEL + G+IF ISEAI ++P+L+KKY+ +VVP+ DN++
Sbjct: 122 KVAVDAVVDS---VSVKTTYQEELAEKGIIFCSISEAIRDYPELIKKYMFSVVPMNDNYF 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVFTDG+FVYIPKGVRCPMELSTYFRIN TGQFERTLI+ADEGSYVSY EGC+
Sbjct: 179 AALNSAVFTDGTFVYIPKGVRCPMELSTYFRINALNTGQFERTLIVADEGSYVSYNEGCS 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP RDENQLHAAVVEL+AL +AEIKYST+QNWYPGD +GKGGIYNFVTKRG C +KI
Sbjct: 239 APMRDENQLHAAVVELIALKDAEIKYSTIQNWYPGDEEGKGGIYNFVTKRGLC-EENAKI 297
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A++ QQ D+GTKM+HL KNT+S I+S
Sbjct: 298 SWTQVETGSAITWKYPSCILKGDNSVGEFYSVAVTTLAQQADTGTKMIHLGKNTSSTIIS 357
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISA NTYRG V + A +RN+++CDSLLIG+ CGAHT PY+ESK++ +EHE
Sbjct: 358 KGISAMKGQNTYRGLVKIGANAEGARNYSECDSLLIGDKCGAHTFPYLESKDAHGQVEHE 417
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATT+KISDE LFY QRGI EE A+++IV+GF +EV +LPME+AVEA+ L++++LEGSV
Sbjct: 418 ATTTKISDEQLFYLRQRGITEEDAVSMIVHGFCKEVFSQLPMEYAVEAKALLNLTLEGSV 477
Query: 489 G 489
G
Sbjct: 478 G 478
>gi|206578883|ref|YP_002238017.1| FeS assembly protein SufB [Klebsiella pneumoniae 342]
gi|206567941|gb|ACI09717.1| FeS assembly protein SufB [Klebsiella pneumoniae 342]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 286/504 (56%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T +Q D+ KG+NE+++R ISA++NEP WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTRLQTDELAKGINEEVVRAISARRNEPQWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A+R WL M++P W + Y +++ D YY+AP ++
Sbjct: 61 LNAFRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANTFLT 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ + +LG+P+RE +VAVDA+FDSVSV TT++E+L G+IF EA
Sbjct: 121 SEVEEAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYREKLAGQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVKKYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEF+S+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V
Sbjct: 412 PDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|312881815|ref|ZP_07741589.1| cysteine desulfurase activator complex subunit SufB [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370566|gb|EFP98044.1| cysteine desulfurase activator complex subunit SufB [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 487
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 283/481 (58%), Positives = 362/481 (75%), Gaps = 14/481 (2%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+D + Y GF ++I D+ KGLNED+IR ISAK+NEP+WMLE+RL A+ W M++P W
Sbjct: 16 VDDESYTQGFYSDIASDQLEKGLNEDVIRAISAKRNEPEWMLEFRLKAFHIWQNMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAP-----KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+ YP++++ D YY+AP S QS + + E+ +++LG+P+RE
Sbjct: 76 LKADYPSLNYQDYSYYSAPSCGQCDSDKAAQSDEFLTQEVEEAFDQLGVPVRE------- 128
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
S VAVDA+FDSVSV TT+ E+L + G+IF SEAI HP+LVK YL TVVP DNF+
Sbjct: 129 -GSNVAVDAIFDSVSVKTTYSEKLAEKGIIFCSFSEAIQHHPELVKTYLGTVVPPEDNFF 187
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALN+AV +DG+FVYIPKGV CPMELSTYFRIN TGQFERT++IADE SYVSY+EGC+
Sbjct: 188 AALNAAVASDGTFVYIPKGVTCPMELSTYFRINAAKTGQFERTILIADENSYVSYIEGCS 247
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP D QLHAAVVE++ L +A +KYSTVQNW+ G GGI NFVTKR C+G SK+
Sbjct: 248 APSHDNYQLHAAVVEVIILKDACVKYSTVQNWFSG-KDTNGGILNFVTKRALCKGSGSKM 306
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ ETGSAITWKYPS +L+G+ S GEFYSIA+++G Q D+GTKM+H+ KNT S I+S
Sbjct: 307 SWTQSETGSAITWKYPSVILQGDHSIGEFYSIALTSGKQLADTGTKMIHIGKNTRSTIIS 366
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KG+SAG S N+YRG V + A ++RNFTQCDS+LIG +CGAHT PY+E +N++ +EHE
Sbjct: 367 KGVSAGSSENSYRGLVKILPSAENARNFTQCDSMLIGPDCGAHTFPYVEVRNNTAQVEHE 426
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
ATT+KI ++ LFYC QRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SV
Sbjct: 427 ATTTKIGEDQLFYCSQRGIAEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSV 486
Query: 489 G 489
G
Sbjct: 487 G 487
>gi|38704004|ref|NP_310417.2| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. Sakai]
gi|168751906|ref|ZP_02776928.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4113]
gi|168756681|ref|ZP_02781688.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4401]
gi|168762256|ref|ZP_02787263.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4501]
gi|168770442|ref|ZP_02795449.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4486]
gi|168775020|ref|ZP_02800027.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4196]
gi|168782095|ref|ZP_02807102.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4076]
gi|168800139|ref|ZP_02825146.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC508]
gi|195937367|ref|ZP_03082749.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. EC4024]
gi|208810594|ref|ZP_03252470.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4206]
gi|208816816|ref|ZP_03257936.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4045]
gi|208819008|ref|ZP_03259328.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4042]
gi|209395906|ref|YP_002270752.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4115]
gi|217328676|ref|ZP_03444757.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. TW14588]
gi|254793300|ref|YP_003078137.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 str. TW14359]
gi|187769410|gb|EDU33254.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4196]
gi|188014128|gb|EDU52250.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4113]
gi|189000284|gb|EDU69270.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4076]
gi|189356219|gb|EDU74638.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4401]
gi|189360584|gb|EDU79003.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4486]
gi|189367527|gb|EDU85943.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4501]
gi|189377527|gb|EDU95943.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC508]
gi|208725110|gb|EDZ74817.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4206]
gi|208731159|gb|EDZ79848.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4045]
gi|208739131|gb|EDZ86813.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4042]
gi|209157306|gb|ACI34739.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. EC4115]
gi|217318023|gb|EEC26450.1| FeS assembly protein SufB [Escherichia coli O157:H7 str. TW14588]
gi|254592700|gb|ACT72061.1| component of SufBCD complex [Escherichia coli O157:H7 str. TW14359]
gi|320188371|gb|EFW63033.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli O157:H7
str. EC1212]
gi|326342050|gb|EGD65831.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli O157:H7
str. 1044]
gi|326343602|gb|EGD67364.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli O157:H7
str. 1125]
Length = 495
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVVSDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|300784735|ref|YP_003765026.1| Fe-S cluster assembly protein SufB [Amycolatopsis mediterranei U32]
gi|299794249|gb|ADJ44624.1| Fe-S cluster assembly protein SufB [Amycolatopsis mediterranei U32]
Length = 482
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 194/486 (39%), Positives = 294/486 (60%), Gaps = 22/486 (4%)
Query: 5 RETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
ET++ + +Y +G+ +++ A +GLNED++ IS KK+EP+WM E RL A +
Sbjct: 18 EETIESL-----GKYAFGWADSDEAGASARRGLNEDVVTDISGKKSEPEWMREARLKALK 72
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W IDF+++ Y+ +D+ ++ TY++LGIP E++
Sbjct: 73 LFEKKPMPNWG-ADLSGIDFENIKYFVRSTEKQATS-WEDLPEDIKNTYDRLGIPEAEKQ 130
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V +E+L++ GV+F+ A+ +HP+L ++Y +V+P
Sbjct: 131 RLV------AGVAAQYESEVVYHQIREDLEEQGVLFLDTDSALKQHPELFQEYFGSVIPA 184
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV Y
Sbjct: 185 GDNKFSALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDAYVHY 244
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR C
Sbjct: 245 VEGCTAPIYQSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRAKC-E 296
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + W GS +T KYPS L GE + GE S+A + Q D+G KM HLA T+
Sbjct: 297 EGATMEWIDGNIGSKVTMKYPSVFLMGEHAKGEVLSVAFAGEGQHQDAGAKMEHLAPYTS 356
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSK ++ G +YRG V V + A HSR+ CD+LL+ + T PY++ +N
Sbjct: 357 STIVSKSVARGGGRTSYRGLVRVAKRAHHSRSSVVCDALLVDTISRSDTYPYVDIRNDEV 416
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 417 SMGHEATVSKVSEDQLFYLMSRGLDEAEAMAMIVRGFVEPIARELPMEYALELNRLIELQ 476
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 477 MEGSVG 482
>gi|237785543|ref|YP_002906248.1| ABC-type transport system involved in Fe-S cluster assembly
permease [Corynebacterium kroppenstedtii DSM 44385]
gi|237758455|gb|ACR17705.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium kroppenstedtii DSM
44385]
Length = 484
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 191/488 (39%), Positives = 293/488 (60%), Gaps = 17/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ ++ +++ + Y YG+ ++ A +G++ED+++ ISAKK+EP+WML+ RL A
Sbjct: 13 SSPQSDEEIIESIAGGYNYGWHDSDVAGASARRGIDEDVVKDISAKKSEPEWMLKNRLKA 72
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ P+W IDFD + Y+ DD+ ++ TY+++GIP E
Sbjct: 73 LSIFQKKPVPNWG-ADLSGIDFDQIKYFVRSTEKQAAT-WDDLPEDIKNTYDRIGIPEAE 130
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L V A ++S V +++L+K GVIF+ A+ ++P+L K+Y TV+
Sbjct: 131 KERLV------AGVAAQYESEVVYHQIRQDLEKQGVIFVDTDTALRDYPELFKEYFGTVI 184
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV
Sbjct: 185 PAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDAYV 244
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR C
Sbjct: 245 HYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRTKC 297
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS ++ KYP+ + G S GE S+A++ Q D+G KM+H+A +
Sbjct: 298 -EEGATMEWIDGNIGSKVSMKYPAVWMTGPYSRGEVLSVAMAGEGQYQDTGAKMVHMAPH 356
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IVSK ++ G YRG V V+ A H +CD+LL+ + T PY + +N
Sbjct: 357 TSSNIVSKSVARGGGRAAYRGLVKVNPNAHHCTANVECDALLVDKISRSDTYPYNDIRND 416
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+L HEAT SK+S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI+
Sbjct: 417 HVSLGHEATVSKVSEDQLFYLMSRGLAEDDAMAMIVRGFVEPIAKELPMEYALELNRLIE 476
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 477 LQMEGSVG 484
>gi|212712082|ref|ZP_03320210.1| hypothetical protein PROVALCAL_03161 [Providencia alcalifaciens DSM
30120]
gi|212685604|gb|EEB45132.1| hypothetical protein PROVALCAL_03161 [Providencia alcalifaciens DSM
30120]
Length = 499
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 287/501 (57%), Positives = 367/501 (73%), Gaps = 25/501 (4%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E + V+ +D +YK GF T + D+ KGLNED++R ISAK+NEP+WML++RL A+
Sbjct: 7 EVGEDVQSWLDEKRYKEGFFTQVATDEMAKGLNEDVVRAISAKRNEPEWMLQFRLDAFNH 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DDVDPEL 108
W M++P W + YP +D+ D YY+AP + + + E+
Sbjct: 67 WKGMEEPHWLKAHYPNLDYQDYSYYSAPSCGSCDDTCGSQSGATQSTGTAEEANYLTSEV 126
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +LG+P+RE SKVAVDA+FDSVSV TT++ +L K G+IF SEAI E
Sbjct: 127 EDAFNQLGVPVRE--------GSKVAVDAIFDSVSVSTTYRGDLAKHGIIFCSFSEAIQE 178
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+P+LV+KYL +VV DNF+AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQF
Sbjct: 179 YPELVQKYLGSVVSSHDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQF 238
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
ERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 239 ERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSET 298
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ
Sbjct: 299 GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILKGDNSVGEFFSVALTNGNQQ 358
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG C
Sbjct: 359 ADTGTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKILPSAHNARNFTQCDSMLIGTQC 418
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
GAHT PY+E KN++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +L
Sbjct: 419 GAHTFPYVEVKNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSEL 478
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
P+EFAVEAQKL+ ISLE SVG
Sbjct: 479 PLEFAVEAQKLLAISLEHSVG 499
>gi|227327026|ref|ZP_03831050.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 499
Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats.
Identities = 294/509 (57%), Positives = 371/509 (72%), Gaps = 30/509 (5%)
Query: 1 MVAVRETVDKVRKIDV----DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M R TVD + + +YK GF T ++ D+ G+NED++R ISAK+NEP+WMLE
Sbjct: 1 MA--RSTVDVPDDVQIWMGDGRYKEGFFTQLETDELAHGINEDVVRAISAKRNEPEWMLE 58
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL--------------- 101
+RL AY+ WL M++P W + Y +D+ D YY+AP S
Sbjct: 59 FRLNAYKAWLEMEEPHWLKAHYEKLDYQDYSYYSAPSCGNCDDSCGSEPGAKQQSGITDV 118
Query: 102 -DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + E+ + +LG+P+RE + KVAVDA+FDSVSV TT++ EL + G+IF
Sbjct: 119 NNYLTSEVENAFNQLGVPVREGK--------KVAVDAIFDSVSVATTYRHELAEKGIIFC 170
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
SEAI EHPDLV++YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRI
Sbjct: 171 SFSEAIQEHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRI 230
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
N TGQFERT++IAD+ SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW
Sbjct: 231 NAAKTGQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNW 290
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G +GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+
Sbjct: 291 FSGKDDAEGGILNFVTKRALCAGEHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSV 350
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A++NG QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCD
Sbjct: 351 ALTNGRQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSATNARNFTQCD 410
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+LIG+ CGAHT PY+E +N++ LEHEATTSKI ++ LFYCLQRGI E+ AI++IVNGF
Sbjct: 411 SMLIGSECGAHTFPYVEVRNNTAQLEHEATTSKIGEDQLFYCLQRGISEDDAISMIVNGF 470
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 471 CKDVFSELPLEFAVEAQKLLAISLEHSVG 499
>gi|332670204|ref|YP_004453212.1| FeS assembly protein SufB [Cellulomonas fimi ATCC 484]
gi|332339242|gb|AEE45825.1| FeS assembly protein SufB [Cellulomonas fimi ATCC 484]
Length = 480
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 194/475 (40%), Positives = 288/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ ++ A +GL+E ++R ISA KNEP+WML+ RL + R + P W
Sbjct: 22 IGNYTYGWHDRDVAGATARRGLSEAVVREISALKNEPEWMLKTRLKSLRLFEKKPMPWWG 81
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY++LGIP E++ L
Sbjct: 82 S-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDRLGIPEAEKQRLV------AG 133
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E L++ GVIF+ + EHP++ ++Y +V+P GDN +A+LN+A
Sbjct: 134 VAAQYESEVVYHQIQESLEEQGVIFLDTDTGLREHPEIFEQYFGSVIPPGDNKFASLNTA 193
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 194 VWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPVYSS 253
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA ++Y+T+QNW +YN VTKR + + W
Sbjct: 254 DSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKR-ATAAEGATMEWVDGN 305
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA + Q D+G KM+H A +T+S IVSK ++ G
Sbjct: 306 IGSKVTMKYPAIYLMGEHARGETLSIAFAGEGQHQDAGAKMVHAAPHTSSSIVSKSVARG 365
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V GA HS + CD+LL+ + T PY++ + ++ HEAT S++
Sbjct: 366 GGRTSYRGLVQVLEGAEHSASNVLCDALLVDQISRSDTYPYVDVREDDVSMGHEATVSRV 425
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+PE A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 426 SEDQLFYLMSRGMPETEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 480
>gi|228993711|ref|ZP_04153616.1| hypothetical protein bpmyx0001_44360 [Bacillus pseudomycoides DSM
12442]
gi|229007309|ref|ZP_04164908.1| hypothetical protein bmyco0002_41900 [Bacillus mycoides Rock1-4]
gi|228753914|gb|EEM03353.1| hypothetical protein bmyco0002_41900 [Bacillus mycoides Rock1-4]
gi|228765922|gb|EEM14571.1| hypothetical protein bpmyx0001_44360 [Bacillus pseudomycoides DSM
12442]
Length = 465
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVCEA-NATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKATNSRSNIECDTLIMDNQSTSDTIPYNEIKNDHVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|295695248|ref|YP_003588486.1| FeS assembly protein SufB [Bacillus tusciae DSM 2912]
gi|295410850|gb|ADG05342.1| FeS assembly protein SufB [Bacillus tusciae DSM 2912]
Length = 465
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 199/476 (41%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++Y+YGF +I V K KGLN ++ +S KNEP WM ++RL + +L+ P+W
Sbjct: 7 ELEEYQYGFRDPDIAVVKFQKGLNRKVVEELSMMKNEPGWMTDFRLRSLEIFLSKPLPTW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P G ++ +DV E+ T+++LGIP E++ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKPTERQG-KTWEDVPEEIKTTFDRLGIPEAERKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + ++ L++ GVIF A+ E+P+L K+Y +TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSIQKNLEEQGVIFTDTDTALREYPELFKEYFATVVPPEDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCDVPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ D A +Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TDSLHSAVVEIIVKDRARCRYTTIQNWAP-------NIYNLVTKRAVAYAD-ATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ + G ++ SIA++ Q D+G K++H A +TTS I+SK IS
Sbjct: 290 NIGSKLTMKYPAVYMMGPRAKATVLSIAVAGKGQHQDAGAKVVHAAPDTTSTIISKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG A ++ +CD+L++ N + T+P E N LEHEAT S+
Sbjct: 350 QGGKTTYRGLAHFSPRAQGAKANIKCDTLILDENSTSDTVPVNEILNDDITLEHEATVSR 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGLSEEEATRMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|41407285|ref|NP_960121.1| hypothetical protein MAP1187 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395637|gb|AAS03504.1| hypothetical protein MAP_1187 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 482
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 197/475 (41%), Positives = 295/475 (62%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEP+WML+ RL A R + P+W
Sbjct: 24 LGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEPEWMLQTRLKALRIFERKPMPTWG 83
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY++LGIP E++ L
Sbjct: 84 S-NLDGIDFDNIKYFVRSTEKQAAS-WEDLPEDIRNTYDRLGIPEAEKQRLV------AG 135
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIFM + EHP++ ++Y TV+P GDN ++ALN+A
Sbjct: 136 VAAQYESEVVYHQIREDLEAQGVIFMDTDTGLREHPEIFQEYFGTVIPAGDNKFSALNTA 195
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 196 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYKS 255
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA ++Y+T+QNW G +YN VTKR + + W
Sbjct: 256 DSLHSAVVEIIVKPNARVRYTTIQNW-------SGNVYNLVTKRARAEA-GATMEWIDGN 307
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S IVSK ++ G
Sbjct: 308 IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARG 367
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA S + +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 368 GGRTSYRGLVQVNKGAHGSCSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 427
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 428 SENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|24113072|ref|NP_707582.1| cysteine desulfurase activator complex subunit SufB [Shigella
flexneri 2a str. 301]
gi|32699668|sp|Q83KW2|SUFB_SHIFL RecName: Full=FeS cluster assembly protein sufB
gi|24052045|gb|AAN43289.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
Length = 495
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +H +LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHTELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|331647174|ref|ZP_08348268.1| FeS assembly protein SufB [Escherichia coli M605]
gi|331043957|gb|EGI16093.1| FeS assembly protein SufB [Escherichia coli M605]
Length = 508
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AY WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++++L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYRKKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|26247933|ref|NP_753973.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli CFT073]
gi|91210896|ref|YP_540882.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli UTI89]
gi|117623862|ref|YP_852775.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli APEC O1]
gi|237705629|ref|ZP_04536110.1| cysteine desulfurase activator complex subunit SufB [Escherichia
sp. 3_2_53FAA]
gi|26108336|gb|AAN80538.1|AE016761_113 SufB protein [Escherichia coli CFT073]
gi|91072470|gb|ABE07351.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli UTI89]
gi|115512986|gb|ABJ01061.1| component of SufBCD complex [Escherichia coli APEC O1]
gi|226900386|gb|EEH86645.1| cysteine desulfurase activator complex subunit SufB [Escherichia
sp. 3_2_53FAA]
gi|281178753|dbj|BAI55083.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 508
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AY WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|157156777|ref|YP_001462977.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli E24377A]
gi|191167855|ref|ZP_03029660.1| FeS assembly protein SufB [Escherichia coli B7A]
gi|193068963|ref|ZP_03049922.1| FeS assembly protein SufB [Escherichia coli E110019]
gi|218695244|ref|YP_002402911.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli 55989]
gi|260855507|ref|YP_003229398.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|260868174|ref|YP_003234576.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300924718|ref|ZP_07140664.1| FeS assembly protein SufB [Escherichia coli MS 182-1]
gi|301326553|ref|ZP_07219894.1| FeS assembly protein SufB [Escherichia coli MS 78-1]
gi|307310746|ref|ZP_07590392.1| FeS assembly protein SufB [Escherichia coli W]
gi|157078807|gb|ABV18515.1| FeS assembly protein SufB [Escherichia coli E24377A]
gi|190902114|gb|EDV61858.1| FeS assembly protein SufB [Escherichia coli B7A]
gi|192957758|gb|EDV88202.1| FeS assembly protein SufB [Escherichia coli E110019]
gi|218351976|emb|CAU97708.1| component of SufBCD complex [Escherichia coli 55989]
gi|257754156|dbj|BAI25658.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|257764530|dbj|BAI36025.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300419096|gb|EFK02407.1| FeS assembly protein SufB [Escherichia coli MS 182-1]
gi|300846773|gb|EFK74533.1| FeS assembly protein SufB [Escherichia coli MS 78-1]
gi|306908924|gb|EFN39420.1| FeS assembly protein SufB [Escherichia coli W]
gi|315060988|gb|ADT75315.1| component of SufBCD complex [Escherichia coli W]
gi|320197867|gb|EFW72475.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli
EC4100B]
gi|323152810|gb|EFZ39080.1| feS assembly protein SufB [Escherichia coli EPECa14]
gi|323180999|gb|EFZ66537.1| feS assembly protein SufB [Escherichia coli 1180]
gi|323186044|gb|EFZ71400.1| feS assembly protein SufB [Escherichia coli 1357]
gi|323378440|gb|ADX50708.1| FeS assembly protein SufB [Escherichia coli KO11]
Length = 495
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WML++R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLKFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|227111734|ref|ZP_03825390.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|253688826|ref|YP_003018016.1| FeS assembly protein SufB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755404|gb|ACT13480.1| FeS assembly protein SufB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 499
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 293/509 (57%), Positives = 371/509 (72%), Gaps = 30/509 (5%)
Query: 1 MVAVRETVDKVRKIDV----DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M R TVD + + +YK GF T ++ D+ G+NED++R ISAK+NEP+WMLE
Sbjct: 1 MA--RSTVDVPDDVQIWMGDGRYKEGFFTQLETDELAHGINEDVVRAISAKRNEPEWMLE 58
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL--------------- 101
+RL AY+ WL M++P W + Y +D+ D YY+AP S
Sbjct: 59 FRLNAYKAWLEMEEPHWLKAHYEKLDYQDYSYYSAPSCGNCDDSCGSEPGAKQQSGITDV 118
Query: 102 -DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + E+ + +LG+P+RE + KVAVDA+FDSVSV TT++ EL + G+IF
Sbjct: 119 NNYLTSEVENAFNQLGVPVREGK--------KVAVDAIFDSVSVATTYRHELAEKGIIFC 170
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
SEAI +HPDLV++YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRI
Sbjct: 171 SFSEAIQDHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRI 230
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
N TGQFERT++IAD+ SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW
Sbjct: 231 NAAKTGQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNW 290
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G +GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+
Sbjct: 291 FSGKDDAEGGILNFVTKRALCAGEHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSV 350
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A++NG QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCD
Sbjct: 351 ALTNGRQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSATNARNFTQCD 410
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+LIG+ CGAHT PY+E +N++ LEHEATTSKI ++ LFYCLQRGI E+ AI++IVNGF
Sbjct: 411 SMLIGSECGAHTFPYVEVRNNTAQLEHEATTSKIGEDQLFYCLQRGISEDDAISMIVNGF 470
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 471 CKDVFSELPLEFAVEAQKLLAISLEHSVG 499
>gi|189095375|ref|YP_001936388.1| putative ABC transporter [Heterosigma akashiwo]
gi|157694718|gb|ABV65994.1| ABC transporter [Heterosigma akashiwo]
gi|157777949|gb|ABV70135.1| ABC transporter [Heterosigma akashiwo]
Length = 479
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 299/481 (62%), Positives = 381/481 (79%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ ++K+ YKYGF T I+ ++ P GLNEDII+ IS KKNEP +M ++RL +Y+RW +
Sbjct: 4 NNLKKLINQPYKYGFATKIEKEEFPTGLNEDIIKLISKKKNEPSFMSKFRLKSYQRWKNL 63
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P WA + Y I+++++ YY+APK SLD++DPEL T+EKLGIPI EQ+ LA
Sbjct: 64 IKPDWAFLNYIDINYEEISYYSAPKLKKKLNSLDEIDPELRETFEKLGIPINEQKRLA-- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
VAVDAVFDSVS+VTTFK+EL K GVIF ISEAI ++P L++KYL T+VP+GDNF+
Sbjct: 122 ---NVAVDAVFDSVSIVTTFKKELAKFGVIFCSISEAIQKYPKLIEKYLGTIVPIGDNFF 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
+ALNSAVF+DGSF YIPK ++CP+ELSTYFRIN++ +GQFERTLIIA+E S+VSYLEGCT
Sbjct: 179 SALNSAVFSDGSFCYIPKNIQCPIELSTYFRINDEFSGQFERTLIIAEENSFVSYLEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP+ + NQLHAAVVEL+AL+NAEIKYSTVQNWY G+ G GG+YNFVTKRG C G SKI
Sbjct: 239 APRYETNQLHAAVVELIALENAEIKYSTVQNWYAGNENGVGGVYNFVTKRGLCVGKSSKI 298
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGS+ITWKYPSC+L GE S GEFYS+A++N +QQ D+GTKMLHL + T S I+S
Sbjct: 299 SWTQVETGSSITWKYPSCMLLGENSKGEFYSVALTNNYQQADTGTKMLHLGQKTRSTIIS 358
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG+S N+YRG V + A +SRN++QCDSLLIGN A+T PY++ NSS LEHE
Sbjct: 359 KGISAGYSINSYRGLVKFSKQAINSRNYSQCDSLLIGNKSQANTFPYVQVLNSSSKLEHE 418
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI +E +FY LQRGIP E + LI++GF ++V KLP+EF+ EA +L+ + LEGSV
Sbjct: 419 ASTSKIGEEQIFYFLQRGIPLEETVGLIISGFCKDVFNKLPLEFSEEADRLLSLKLEGSV 478
Query: 489 G 489
G
Sbjct: 479 G 479
>gi|157145963|ref|YP_001453282.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
koseri ATCC BAA-895]
gi|157083168|gb|ABV12846.1| hypothetical protein CKO_01716 [Citrobacter koseri ATCC BAA-895]
Length = 495
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 374/504 (74%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T +Q D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLQTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AY+ WL M++P W + Y +++ D YY+AP ++
Sbjct: 61 LNAYKAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVKKYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGNSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|118463302|ref|YP_882500.1| FeS assembly protein SufB [Mycobacterium avium 104]
gi|254775763|ref|ZP_05217279.1| FeS assembly protein SufB [Mycobacterium avium subsp. avium ATCC
25291]
gi|118164589|gb|ABK65486.1| FeS assembly protein SufB [Mycobacterium avium 104]
Length = 482
Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 198/475 (41%), Positives = 295/475 (62%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEP WML+ RL A R + P+W
Sbjct: 24 LGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEPGWMLQTRLKALRIFERKPMPTWG 83
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY++LGIP E++ L
Sbjct: 84 S-NLDGIDFDNIKYFVRSTEKQAAS-WEDLPEDIRNTYDRLGIPEAEKQRLV------AG 135
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIFM + EHP++ ++Y TV+P GDN ++ALN+A
Sbjct: 136 VAAQYESEVVYHQIREDLEAQGVIFMDTDTGLREHPEIFQEYFGTVIPAGDNKFSALNTA 195
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 196 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYKS 255
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA ++Y+T+QNW G +YN VTKR + + W
Sbjct: 256 DSLHSAVVEIIVKPNARVRYTTIQNW-------SGNVYNLVTKRARAEA-GATMEWIDGN 307
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S IVSK ++ G
Sbjct: 308 IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARG 367
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 368 GGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 427
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 428 SENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|300934490|ref|ZP_07149746.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium resistens DSM
45100]
Length = 476
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 197/492 (40%), Positives = 286/492 (58%), Gaps = 19/492 (3%)
Query: 1 MVAVRETVDKVRKID--VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
M + +I + Y YG+ + A +GL+E+++R ISAKKNEP+WMLE
Sbjct: 1 MTQTAQKPQSDEEIINSIGAYGYGWHDKDDAGASARRGLSEEVVRDISAKKNEPEWMLER 60
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL A + P+W IDFD++ Y+ +D+ ++ TY+KLGI
Sbjct: 61 RLKALDIFDKKPMPTWG-ADLSGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGI 118
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P E++ L V A ++S V +E+L+ GVIF+ + E+P+L ++Y
Sbjct: 119 PEAERQRLV------AGVAAQYESEVVYHQIREDLESQGVIFVDTDTGLREYPELFEEYF 172
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TV+P GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE
Sbjct: 173 GTVIPSGDNKFSALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+YV Y+EGCTAP + LH+AVVE+V +Y+T+QNW +YN VTK
Sbjct: 233 DAYVHYVEGCTAPIYKTDSLHSAVVEIVVKKGGRCRYTTIQNW-------SNNVYNLVTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C + + W GS +T KYP+ + G + GE S+A + Q D+G KM H
Sbjct: 286 RTKC-EEGATMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMKH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
LA T+S IVSK ++ YRG V VH A H + +CD+LL+ + + T PY +
Sbjct: 345 LAPYTSSNIVSKSVARSGGRAAYRGLVEVHANAHHCASNVECDALLVDSISRSDTYPYND 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N L HEAT S++S++ LFY + RGI EE A+A+IV GFV + ++LPME+A+E
Sbjct: 405 IRNDHVTLGHEATVSQVSEDQLFYLMSRGIEEEEAMAMIVRGFVEPIAKELPMEYALELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGSVG
Sbjct: 465 RLIELQMEGSVG 476
>gi|269101011|ref|YP_003289159.1| Chloroplast conserved hypothetical protein [Ectocarpus siliculosus]
gi|266631519|emb|CAV31190.1| Chloroplast conserved hypothetical protein [Ectocarpus siliculosus]
gi|270118649|emb|CAT18698.1| Chloroplast conserved hypothetical protein [Ectocarpus siliculosus]
Length = 483
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 297/487 (60%), Positives = 375/487 (77%), Gaps = 6/487 (1%)
Query: 4 VRETVD-KVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ ET + ++++ YKYGF T+I++D P GLNE I+R I K NEPD+M +R+ A
Sbjct: 2 MTETNNATLQQLVNQPYKYGFSTDIEIDTLPPGLNEKIVRNIIKKNNEPDYMFHFRIGAL 61
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
++W MK P+WA++ + +D+ + YY+APK+ +LD+VDPE+ T++KLGI + EQ
Sbjct: 62 KKWRQMKSPTWAKLDFLEMDYQKIVYYSAPKTKKTLANLDEVDPEIKDTFDKLGISLNEQ 121
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LA VAVDAVFDSVS+ TTFKEEL+K GVIF PISEAI +P LVK++L +VVP
Sbjct: 122 KRLA-----NVAVDAVFDSVSIATTFKEELEKYGVIFCPISEAIKNYPHLVKQFLGSVVP 176
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDNF+AALNSAVFTDGSF Y+PK +RCP+ELSTYFRIN K +GQFERTLIIA+EGSY+S
Sbjct: 177 FGDNFFAALNSAVFTDGSFCYVPKNLRCPLELSTYFRINNKESGQFERTLIIAEEGSYIS 236
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAPQ D NQLHAA+VEL+AL NAEIKYSTVQNWY GD G GGIYNFVTKRG C
Sbjct: 237 YLEGCTAPQYDTNQLHAAIVELIALKNAEIKYSTVQNWYAGDKNGIGGIYNFVTKRGLCI 296
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SKISWTQ+ETGSAITWKYPSC+L G +S GEFYS+A++ QQ D+GTKM+H+ NT
Sbjct: 297 GENSKISWTQVETGSAITWKYPSCVLIGNESQGEFYSVALTTNMQQADTGTKMIHVGSNT 356
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+I+SKGIS+G+S N+YRG V + A SRNF+QCDSLL G + A+T PYI+ +NS+
Sbjct: 357 KSQIISKGISSGYSKNSYRGLVKIGTKALDSRNFSQCDSLLFGADAQANTFPYIQVQNST 416
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSK+ +E LFY LQRGI E A+ LI+ GF + V +LP+EFA E + L+ I
Sbjct: 417 SKIEHEASTSKVGEEQLFYLLQRGINAEDAVTLILTGFCKIVFDELPIEFASEVEHLLRI 476
Query: 483 SLEGSVG 489
LEGSVG
Sbjct: 477 KLEGSVG 483
>gi|331697201|ref|YP_004333440.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
gi|326951890|gb|AEA25587.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
Length = 478
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 193/490 (39%), Positives = 291/490 (59%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
V+ + + + + +Y +G+ ++ A +GL+ D++ IS KNEP+WMLE+RL
Sbjct: 5 PEVQPQLTQEETLATLGRYDFGWSDPDVAGASARRGLSADVVADISRLKNEPEWMLEFRL 64
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + P W IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 65 KALNLFERKPMPRWGS-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPADIKNTYDKLGIPE 122
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L V A ++S V +E+L++ GVIF+ + EHP+L ++Y +
Sbjct: 123 AEKARLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTGLREHPELFREYFGS 176
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN ++ALNSAV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 177 VIPSGDNKFSALNSAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGA 236
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V +Y+T+QNW +YN VTKR
Sbjct: 237 YVHYVEGCTAPIYKSDSLHSAVVEIVVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+HLA
Sbjct: 290 KA-EEGATMEWVDGNLGSKVTMKYPAVFLMGEHAKGEVLSIAFAGEGQHQDAGAKMVHLA 348
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S I+SK ++ G +YRG V V+ A +SR+ +CD+LL+ + T PY++ +
Sbjct: 349 PNTSSTIISKSVARGGGRTSYRGLVQVNARAKNSRSTVKCDALLVDTISRSDTYPYVDVR 408
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +L
Sbjct: 409 TDDVSMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFVEPIARELPMEYALELNRL 468
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 469 IELQMEGSVG 478
>gi|325963206|ref|YP_004241112.1| Iron-regulated ABC transporter membrane component SufB
[Arthrobacter phenanthrenivorans Sphe3]
gi|323469293|gb|ADX72978.1| Iron-regulated ABC transporter membrane component SufB
[Arthrobacter phenanthrenivorans Sphe3]
Length = 487
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 203/490 (41%), Positives = 300/490 (61%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ E ++K ++ + Y+YG+ V A +GLNE+++R ISAKK+EP+WML+ RL
Sbjct: 14 TVISEILEKNPELHGIGNYEYGWADKNDVGANARRGLNEEVVRDISAKKSEPEWMLDLRL 73
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ DD+ ++ TY+KLGIP
Sbjct: 74 KGLKYFDRKPMPTWG-ADLSGIDFDNIKYFVRSTEKQATS-WDDLPEDIKNTYDKLGIPE 131
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP++ ++Y T
Sbjct: 132 AEKQRLV------SGVAAQYESEVVYHQLREDLERQGVIFLDTDTALKEHPEIFQEYFGT 185
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN++V++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE S
Sbjct: 186 VIPVGDNKFASLNTSVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEDS 245
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A ++Y+T+QNW +YN VTKR
Sbjct: 246 YVHYIEGCTAPIYTSDSLHSAVVEIIVKKGARVRYTTIQNW-------SNNVYNLVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 299 IC-EEGATMEWVDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKMVHIA 357
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT S I+SK ++ G YRG V V GA HS N +CD+LL+ + T PYI+ +
Sbjct: 358 PNTKSSIISKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPYIDIR 417
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT S++S+E LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +L
Sbjct: 418 EDDVVMGHEATVSRVSEEQLFYLMSRGMREDEAMAMIVRGFIEPIARELPMEYALELNRL 477
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 478 IELQMEGSVG 487
>gi|311279427|ref|YP_003941658.1| FeS assembly protein SufB [Enterobacter cloacae SCF1]
gi|308748622|gb|ADO48374.1| FeS assembly protein SufB [Enterobacter cloacae SCF1]
Length = 495
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ Q YK GF T +Q D+ KG+NE+++R ISAK+NEP+WML +R
Sbjct: 1 MSRNTEATDDVKTWTGGQLNYKEGFFTQLQTDELAKGINEEVVRAISAKRNEPEWMLTFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP S D
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDTLNYQDFSYYSAPSCGNCDDSCDAQPGAVQQPAGNAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPALVQKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PG+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGND 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEF+S+A+++G
Sbjct: 293 N-SGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG
Sbjct: 352 RQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V
Sbjct: 412 PDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|317047891|ref|YP_004115539.1| FeS assembly protein SufB [Pantoea sp. At-9b]
gi|316949508|gb|ADU68983.1| FeS assembly protein SufB [Pantoea sp. At-9b]
Length = 497
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 294/506 (58%), Positives = 373/506 (73%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET D V+ + YK GF T +Q ++ GLNED++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSRHSETSDDVQMWEGKLNYKEGFFTQLQTEEFAHGLNEDVVRAISAKRNEPEWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DD 103
A+R WL M++P W + Y +D+ D YY+AP + +
Sbjct: 61 KAFRAWLEMEEPHWLKAHYEKLDYQDYSYYSAPSCGNCDDTCASEPGATQASGSAPASEY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + +LG+P+RE + +VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 121 LTQEVENAFNQLGVPVREGK--------EVAVDAIFDSVSVATTYRGKLAEQGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI EHP+LVKKYL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIQEHPELVKKYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PG
Sbjct: 233 KTGQFERTILVADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
G+GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A++
Sbjct: 293 GE-GEGGILNFVTKRALCEGDHSKMSWTQSETGSAITWKYPSCILRGDYSIGEFYSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGHQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG +CGAHT PY+E++N++ LEHEATTS+I ++ +FYCLQRGI EE AI++IVNGF ++
Sbjct: 412 IGPDCGAHTFPYVEARNNTAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|50120790|ref|YP_049957.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
atrosepticum SCRI1043]
gi|49611316|emb|CAG74763.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 499
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 295/509 (57%), Positives = 370/509 (72%), Gaps = 30/509 (5%)
Query: 1 MVAVRETVDKVRKIDV----DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M R TVD + + +YK GF T ++ D+ G+NED++R ISAK+NEP+WMLE
Sbjct: 1 MA--RSTVDVPDDVQIWMGDGRYKEGFFTQLETDELAHGINEDVVRAISAKRNEPEWMLE 58
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL--------------- 101
+RL AY+ WL M++P W + Y +D+ D YY+AP S
Sbjct: 59 FRLNAYKAWLEMEEPHWLKAHYEKLDYQDYSYYSAPSCGNCDDSCGSEPGAKQQSGITDV 118
Query: 102 -DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + E+ + +LG+P+RE KVAVDA+FDSVSV TT++ EL + G+IF
Sbjct: 119 NNYLTSEVENAFNQLGVPVRE--------GQKVAVDAIFDSVSVATTYRHELAEKGIIFC 170
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
SEAI EHPDLV++YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRI
Sbjct: 171 SFSEAIQEHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRI 230
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
N TGQFERT++IAD+ SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW
Sbjct: 231 NAAKTGQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNW 290
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G +GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+
Sbjct: 291 FSGKDDTEGGILNFVTKRALCAGDHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSV 350
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A++NG QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCD
Sbjct: 351 ALTNGRQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSATNARNFTQCD 410
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+LIG+ CGAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF
Sbjct: 411 SMLIGSECGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGF 470
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 471 CKDVFSELPLEFAVEAQKLLAISLEHSVG 499
>gi|145224261|ref|YP_001134939.1| FeS assembly protein SufB [Mycobacterium gilvum PYR-GCK]
gi|315444596|ref|YP_004077475.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. Spyr1]
gi|145216747|gb|ABP46151.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium gilvum PYR-GCK]
gi|315262899|gb|ADT99640.1| Iron-regulated ABC transporter membrane component SufB
[Mycobacterium sp. Spyr1]
Length = 479
Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats.
Identities = 193/475 (40%), Positives = 294/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKK+EP+WML+ RL A R + P+W
Sbjct: 21 LGKYGYGWADSDVAGASAQRGLSEAVVRDISAKKSEPEWMLDIRLKALRTFDKKPMPNWG 80
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY+KLGIP E++ L
Sbjct: 81 S-DLDGIDFDNIKYFVRSSEKQAAT-WDDLPEDIRNTYDKLGIPEAEKQRLV------SG 132
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V + +E+L+ GVIF+ A+ EHP+L ++Y TV+P GDN ++ALN+A
Sbjct: 133 VAAQYESEVVYHSIREDLEAQGVIFLDTDTALKEHPELFREYFGTVIPAGDNKFSALNTA 192
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 193 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKS 252
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW ++N VTKR + + W
Sbjct: 253 DSLHSAVVEIIVKPGGRCRYTTIQNW-------SNNVFNLVTKRARAEA-GATMEWVDGN 304
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S IVSK ++ G
Sbjct: 305 IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPNTSSNIVSKSVARG 364
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 365 GGRASYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 424
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ +FY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 425 SEDQMFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 479
>gi|15802095|ref|NP_288117.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O157:H7 EDL933]
gi|12515685|gb|AAG56670.1|AE005391_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 508
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPELVRKYLGTVVPGNDNFFAALNAAVVSDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+E C+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEXCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|330469143|ref|YP_004406886.1| FeS assembly protein SufB [Verrucosispora maris AB-18-032]
gi|328812114|gb|AEB46286.1| FeS assembly protein SufB [Verrucosispora maris AB-18-032]
Length = 476
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 293/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ ++ A +GLNE ++R ISAKKNEP WML+ RL R + P+W
Sbjct: 18 LGNYEYGWADPDVAGAVAQRGLNEAVVRDISAKKNEPAWMLDLRLKGLRLFERKPMPAWG 77
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 78 -ADLTGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGIPEAEKQRLV------AG 129
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GV+F+ A+ EH D+ K+Y TV+PVGDN +AALN++
Sbjct: 130 VAAQYESEVVYHKIREDLEEQGVVFLDTDTALKEHEDIFKEYFGTVIPVGDNKFAALNTS 189
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 190 VWSGGSFIYVPKGVQVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYSS 249
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 250 DSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVCH-EGATMEWIDGN 301
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A++ Q D+G KM+H A +T+S IVSK I+ G
Sbjct: 302 IGSKVTMKYPAVYMTGEHAKGEVLSVAMAGEGQHQDAGAKMVHAAPHTSSTIVSKSIARG 361
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V G+ S + +CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 362 GGRTSYRGLVQVLEGSHSSASTVKCDALLVDTISRSDTYPYVDIREDDVSMGHEATVSKV 421
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 422 SEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 476
>gi|119716776|ref|YP_923741.1| FeS assembly protein SufB [Nocardioides sp. JS614]
gi|119537437|gb|ABL82054.1| Iron-regulated ABC transporter membrane component SufB
[Nocardioides sp. JS614]
Length = 472
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 191/490 (38%), Positives = 296/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ++ E +++ I +Y++G+ +++ A +GLN+ ++R ISAKK EP WML+ RL
Sbjct: 1 MTSIEELNPELKGI--GRYEFGWADSDAAGATAQRGLNDAVVRDISAKKGEPQWMLDLRL 58
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + PSW IDFD++ Y+ +D+ ++ TY++LGIP
Sbjct: 59 KGLKLFDRKPMPSWGS-DLSDIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDRLGIPE 116
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V + +L++ GVIF+ A+ EH DL ++Y T
Sbjct: 117 AEKQALV------AGVAAQYESEVVYHQIRGDLEEQGVIFVDTDTALREHEDLFREYFGT 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++PVGDN +AALN++V++ GSFVY+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 171 IIPVGDNKFAALNTSVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 231 YVHYVEGCTAPVYSSDSLHSAVVEIIIKKGGRCRYTTIQNW-------SNNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A
Sbjct: 284 TCEA-GATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHAA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S I+SK ++ G +YRG + V+ GA S++ CD+LL+ + T PY++ +
Sbjct: 343 PHTSSSILSKSVARGGGRTSYRGLIQVNEGAHGSKSNVLCDALLVDQISRSDTYPYVDIR 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA+ SK+SD+ LFY + RG+ ++ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 403 EDDVSMGHEASVSKVSDDQLFYLMSRGMEQDEAMAMIVRGFVEPIAKELPMEYALELNRL 462
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 463 IELQMEGAVG 472
>gi|325497140|gb|EGC94999.1| cysteine desulfurase activator complex subunit SufB [Escherichia
fergusonii ECD227]
Length = 495
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E + V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATNDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ K+T S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKSTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|110641804|ref|YP_669534.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli 536]
gi|191171762|ref|ZP_03033309.1| FeS assembly protein SufB [Escherichia coli F11]
gi|218689625|ref|YP_002397837.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli ED1a]
gi|300987767|ref|ZP_07178345.1| FeS assembly protein SufB [Escherichia coli MS 200-1]
gi|306815064|ref|ZP_07449220.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli NC101]
gi|110343396|gb|ABG69633.1| SufB protein [Escherichia coli 536]
gi|190908092|gb|EDV67684.1| FeS assembly protein SufB [Escherichia coli F11]
gi|218427189|emb|CAR08075.2| component of SufBCD complex [Escherichia coli ED1a]
gi|300306055|gb|EFJ60575.1| FeS assembly protein SufB [Escherichia coli MS 200-1]
gi|305851712|gb|EFM52165.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli NC101]
gi|315299721|gb|EFU58961.1| FeS assembly protein SufB [Escherichia coli MS 16-3]
gi|320195421|gb|EFW70046.1| Iron-sulfur cluster assembly protein SufB [Escherichia coli
WV_060327]
gi|324011452|gb|EGB80671.1| FeS assembly protein SufB [Escherichia coli MS 60-1]
gi|330911490|gb|EGH40000.1| iron-sulfur cluster assembly protein SufB [Escherichia coli AA86]
Length = 495
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AY WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++++L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYRKKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|218558552|ref|YP_002391465.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli S88]
gi|227885898|ref|ZP_04003703.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Escherichia coli 83972]
gi|300994858|ref|ZP_07180971.1| FeS assembly protein SufB [Escherichia coli MS 45-1]
gi|301050986|ref|ZP_07197832.1| FeS assembly protein SufB [Escherichia coli MS 185-1]
gi|331673240|ref|ZP_08374008.1| FeS assembly protein SufB [Escherichia coli TA280]
gi|331683190|ref|ZP_08383791.1| FeS assembly protein SufB [Escherichia coli H299]
gi|218365321|emb|CAR03042.1| component of SufBCD complex [Escherichia coli S88]
gi|222033439|emb|CAP76180.1| Protein sufB [Escherichia coli LF82]
gi|227837077|gb|EEJ47543.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Escherichia coli 83972]
gi|294493585|gb|ADE92341.1| FeS assembly protein SufB [Escherichia coli IHE3034]
gi|300297363|gb|EFJ53748.1| FeS assembly protein SufB [Escherichia coli MS 185-1]
gi|300406198|gb|EFJ89736.1| FeS assembly protein SufB [Escherichia coli MS 45-1]
gi|307553704|gb|ADN46479.1| FeS assembly protein SufB [Escherichia coli ABU 83972]
gi|307626831|gb|ADN71135.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli UM146]
gi|312946283|gb|ADR27110.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O83:H1 str. NRG 857C]
gi|315286391|gb|EFU45827.1| FeS assembly protein SufB [Escherichia coli MS 110-3]
gi|315290530|gb|EFU49904.1| FeS assembly protein SufB [Escherichia coli MS 153-1]
gi|323187107|gb|EFZ72423.1| feS assembly protein SufB [Escherichia coli RN587/1]
gi|323952190|gb|EGB48063.1| FeS assembly protein SufB [Escherichia coli H252]
gi|323956584|gb|EGB52322.1| FeS assembly protein SufB [Escherichia coli H263]
gi|331069438|gb|EGI40825.1| FeS assembly protein SufB [Escherichia coli TA280]
gi|331079405|gb|EGI50602.1| FeS assembly protein SufB [Escherichia coli H299]
Length = 495
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AY WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|25028242|ref|NP_738296.1| hypothetical protein CE1686 [Corynebacterium efficiens YS-314]
gi|259507301|ref|ZP_05750201.1| FeS assembly protein SufB [Corynebacterium efficiens YS-314]
gi|23493526|dbj|BAC18496.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165105|gb|EEW49659.1| FeS assembly protein SufB [Corynebacterium efficiens YS-314]
Length = 481
Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats.
Identities = 195/484 (40%), Positives = 291/484 (60%), Gaps = 18/484 (3%)
Query: 7 TVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T D++ + + Y YG+ + A +GL+E+++R ISAKK E +WML+ RL A +
Sbjct: 15 TDDQIIE-SIGPYNYGWHDSDDAGASARRGLSEEVVRDISAKKGESEWMLQQRLKALSIF 73
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
P+W IDFD + Y+ QS +D+ ++ TY++LGIP E++ L
Sbjct: 74 EKKPMPTWG-ADLSGIDFDQIKYFVRSTEKQA-QSWEDLPEDIKNTYDRLGIPEAEKQRL 131
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y TV+P GD
Sbjct: 132 V------AGVAAQYESEVVYHQIREDLEEKGVIFLDTDTALKEHPELFQEYFGTVIPAGD 185
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N ++ALNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV Y+E
Sbjct: 186 NKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVE 245
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 246 GCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRTKV-EEG 297
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ W GS +T KYP+ + G + GE S+A + Q D+G KM+H+A +T+S
Sbjct: 298 GTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMVHMAPHTSSN 357
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK ++ G YRG V ++ A HS + +CD+LL+ + + T PY + +N +L
Sbjct: 358 IVSKSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDISRSDTYPYNDIRNDHVSL 417
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEAT S++S+E LFY + RG+ EE A+A+IV GFV + ++LPME+A+E +LI++ +E
Sbjct: 418 GHEATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQME 477
Query: 486 GSVG 489
GSVG
Sbjct: 478 GSVG 481
>gi|311898928|dbj|BAJ31336.1| putative FeS assembly protein SufB [Kitasatospora setae KM-6054]
Length = 470
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 191/475 (40%), Positives = 292/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y+YG+ +++ A +GL+E ++R ISAKKNE +WML+ RL + + P+W
Sbjct: 12 LGKYEYGWADSDTAGAAAKRGLSEAVVRDISAKKNESEWMLDLRLKGLKLFGKKPMPTWG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +S +D+ ++ TY+KLGIP E++ L
Sbjct: 72 S-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPADIKATYDKLGIPEAEKQRLV------AG 123
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y TV+P GDN +AALN+A
Sbjct: 124 VAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGTVIPAGDNKFAALNTA 183
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 184 VWSGGSFIYVPKGVKVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYSS 243
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 244 DSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAVAY-EGATMEWIDGN 295
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A +T+S IVSK ++ G
Sbjct: 296 IGSKVTMKYPAVYLMGEHARGETLSIAFAGEGQHQDAGAKMVHMAPHTSSHIVSKSVARG 355
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG + + G+ +++ CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 356 GGRTSYRGLIEIGEGSHGAKSNVLCDALLVDTVSRSDTYPYVDVREDDVSMGHEATVSKV 415
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 416 SEDQLFYLMSRGLSETEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGSVG 470
>gi|42784162|ref|NP_981409.1| hypothetical protein BCE_5116 [Bacillus cereus ATCC 10987]
gi|206976394|ref|ZP_03237301.1| FeS assembly protein SufB [Bacillus cereus H3081.97]
gi|217962442|ref|YP_002341014.1| FeS assembly protein SufB [Bacillus cereus AH187]
gi|222098427|ref|YP_002532485.1| iron-regulated ABC transporter [Bacillus cereus Q1]
gi|229141696|ref|ZP_04270226.1| hypothetical protein bcere0013_47860 [Bacillus cereus BDRD-ST26]
gi|229199125|ref|ZP_04325808.1| hypothetical protein bcere0001_46380 [Bacillus cereus m1293]
gi|42740093|gb|AAS44017.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|206745318|gb|EDZ56718.1| FeS assembly protein SufB [Bacillus cereus H3081.97]
gi|217067754|gb|ACJ82004.1| FeS assembly protein SufB [Bacillus cereus AH187]
gi|221242486|gb|ACM15196.1| probable iron-regulated ABC transporter [Bacillus cereus Q1]
gi|228584396|gb|EEK42531.1| hypothetical protein bcere0001_46380 [Bacillus cereus m1293]
gi|228641764|gb|EEK98065.1| hypothetical protein bcere0013_47860 [Bacillus cereus BDRD-ST26]
gi|324328909|gb|ADY24169.1| putative iron-regulated ABC transporter [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 465
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|300858511|ref|YP_003783494.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
pseudotuberculosis FRC41]
gi|300685965|gb|ADK28887.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium pseudotuberculosis
FRC41]
gi|302330781|gb|ADL20975.1| FeS assembly protein SufB [Corynebacterium pseudotuberculosis 1002]
Length = 484
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 204/486 (41%), Positives = 289/486 (59%), Gaps = 18/486 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
T D++ + + Y YG+ + A +GL+ED++R ISA+KNEP+WMLE RL A
Sbjct: 16 PSTDDEIIE-SMGPYNYGWHDSDEAGQNARRGLDEDVVRHISAQKNEPEWMLEQRLKALN 74
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W I+FDD YY + DD+ ++ TY+KLGIP E++
Sbjct: 75 TFEKKPMPTWGP-DLSFINFDDFKYYVRSTEKQA-TTWDDLPEDIKNTYDKLGIPEAEKQ 132
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y TVVP
Sbjct: 133 RLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALREHPELFREYFGTVVPA 186
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN ++ALNSAV++ GSFVY+PKGV + L YFRIN + GQFERTLII DEG+YV Y
Sbjct: 187 GDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHY 246
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP + LH+AVVE++ NA +Y+T+QNW + N VT+R
Sbjct: 247 VEGCTAPIYQSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVLNLVTQRSKV-E 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + W GS IT KYP+ + G + GE S A + Q D+G KM H+A T+
Sbjct: 299 EGATMEWVDGNIGSKITMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDTGAKMQHMAPYTS 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSK ++ YRG V V A HS + +CD+LL+ N + T PY + +N
Sbjct: 359 SNIVSKSVARSGGRAAYRGLVRVSANAHHSVSNVECDALLVDNISRSDTYPYNDIRNDHV 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+L HEAT S++S+E LFY RGI E+ A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 419 SLGHEATVSQVSEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQ 478
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 479 MEGSVG 484
>gi|271967268|ref|YP_003341464.1| Iron-regulated ABC transporter membrane component SufB
[Streptosporangium roseum DSM 43021]
gi|270510443|gb|ACZ88721.1| Iron-regulated ABC transporter membrane component SufB
[Streptosporangium roseum DSM 43021]
Length = 470
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 190/475 (40%), Positives = 287/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ YK+G+ +++ A +GL+E+++R ISA KNEP+WML+ RL R + P+W
Sbjct: 12 LGNYKFGWADSDAAGSTARRGLSEEVVRNISALKNEPEWMLDLRLKGLRLFGKKPLPNWG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +++ ++ TY+KLGIP E++ L
Sbjct: 72 S-DLSGIDFDNIKYFVRSTEKQAAS-WEELPDDIKNTYDKLGIPEAEKQRLI------AG 123
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +++L+ GVIF+ A+ EH +L K+Y TV+PVGDN +AALN+A
Sbjct: 124 VAAQYESEVVYHQIQKDLEDKGVIFVDTDTALKEHEELFKEYFGTVIPVGDNKFAALNTA 183
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
++ GSF+Y+P V + L YFRIN + GQFERTLII DE SYV Y+EGCTAP
Sbjct: 184 TWSGGSFIYVPPNVNVEIPLQAYFRINTENMGQFERTLIIVDENSYVHYVEGCTAPIYSS 243
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ A +Y+T+QNW +YN VTKR + + W
Sbjct: 244 DSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRAVAY-EGATMEWIDGN 295
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A + Q D+G KM+HLA NT+S ++SK ++ G
Sbjct: 296 IGSKVTMKYPAVYLMGEHAKGETLSVAFAGEGQHQDAGAKMVHLAPNTSSTVISKSVARG 355
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V + GA S + +CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 356 GGRTSYRGLVQIEEGAHGSASTVKCDALLVDQISRSDTYPYVDVREDDVSMGHEATVSKV 415
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 416 SDDQLFYLMSRGLNEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 470
>gi|238895190|ref|YP_002919925.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae NTUH-K2044]
gi|238547507|dbj|BAH63858.1| Fe-S cluster assembly protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 495
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 287/504 (56%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T +Q D+ KG+NE+++R ISA++NEP WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTRLQTDELAKGINEEVVRAISARRNEPQWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP ++
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANTFLT 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ + +LG+P+RE +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 SEVEEAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVKKYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEF+S+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI +IVNGF ++V
Sbjct: 412 PDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAILMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|269956157|ref|YP_003325946.1| FeS assembly protein SufB [Xylanimonas cellulosilytica DSM 15894]
gi|269304838|gb|ACZ30388.1| FeS assembly protein SufB [Xylanimonas cellulosilytica DSM 15894]
Length = 479
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 202/495 (40%), Positives = 296/495 (59%), Gaps = 22/495 (4%)
Query: 1 MVAVRETVDKVRKID-----VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWM 54
M A E D + Y+YG+ +I A +GL+E ++R ISA KNEP+WM
Sbjct: 1 MTAPTEQRTDKPSDDEIIASIGSYEYGWHDSDIAGATAQRGLSEAVVRNISALKNEPEWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
L RL A R + PSW IDFD++ Y+ +++ ++ TY++
Sbjct: 61 LNQRLKALRLFGKKPMPSWG-ADLSGIDFDNIKYFVRSTEKQASS-WEELPEDIKVTYDR 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LGIP E++ L V A ++S V +E+L++ GVIF+ + ++P+L +
Sbjct: 119 LGIPEAEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFVDTDTGLRDYPELFQ 172
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+Y TV+P GDN +AALNSAV++ GSFVY+P GV + L YFRIN + GQFERTLII
Sbjct: 173 EYFGTVIPSGDNKFAALNSAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLII 232
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
ADEGSYV Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN
Sbjct: 233 ADEGSYVHYVEGCTAPIYSSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNL 285
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VTKR + + W GS +T KYP+ L GE + GE SIA + Q D+G+K
Sbjct: 286 VTKR-ATAAEGATMEWVDGNIGSKVTMKYPAIYLLGEHAKGETLSIAFAGEGQHQDAGSK 344
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A NT+S I+SK ++ G +YRG V + GA+HS + CD+LL+ + T P
Sbjct: 345 MVHAAPNTSSSIISKSVARGGGRTSYRGLVQILEGASHSASNVLCDALLVDQISRSDTYP 404
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y++ + ++ HEAT S++S++ LFY + RG+PE A+A+IV GFV + ++LPME+A+
Sbjct: 405 YVDVREDDVSMGHEATVSRVSEDQLFYLMSRGMPETEAMAMIVRGFVEPIARELPMEYAL 464
Query: 475 EAQKLIDISLEGSVG 489
E +LI++ +EGSVG
Sbjct: 465 ELNRLIELQMEGSVG 479
>gi|333005925|gb|EGK25441.1| feS assembly protein SufB [Shigella flexneri K-272]
gi|333018830|gb|EGK38123.1| feS assembly protein SufB [Shigella flexneri K-227]
Length = 495
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD-------------VD 105
L AYR WL M++P W + Y +++ D YY+AP + +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASELGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLTISLEHSVG 495
>gi|302144150|emb|CBI23255.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 277/487 (56%), Positives = 345/487 (70%), Gaps = 29/487 (5%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
A T DK++KI YK+G+ NI D PKGL+E IR IS +KNEPDWMLE+RL +Y
Sbjct: 54 ATSSTDDKLQKILNRDYKWGWFENIDSDAIPKGLSEKTIRMISERKNEPDWMLEFRLKSY 113
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
++L MK+P W+ RYP IDF D+ YY+ PK SLD+ DPELLR ++KLG+P+ EQ
Sbjct: 114 EKFLKMKEPKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLDEADPELLRYFDKLGVPLNEQ 173
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LA VAVDAV DSVS+ TT ++ L+K+GVIF ISEAI E+PDLV+KYL VVP
Sbjct: 174 NRLA-----NVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVRKYLGRVVP 228
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN+YAALNSAVF+DGSF Y+PK + AD+ S+V
Sbjct: 229 SDDNYYAALNSAVFSDGSFCYVPKDTKF------------------------ADDRSFVE 264
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP D NQLHAAVVEL + AEIKYSTVQNWY GD +G+GGIYNFVTKRG C
Sbjct: 265 YLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGRGGIYNFVTKRGLCS 324
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G RSKISWTQ+ETGSAITWKYPS +L G+ + GEFYS+A++N +QQ D+GTKM+H KNT
Sbjct: 325 GARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKMIHKGKNT 384
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
SRI+SKGISAG S N YRG V V A ++RN +QCDS+LIG+N A+T PYI+ KN +
Sbjct: 385 RSRIISKGISAGNSRNCYRGLVQVQSKAKNARNSSQCDSMLIGDNAAANTYPYIQVKNPT 444
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA+TSKI ++ LFY QRGI E A+A +++GF ++V +LP EF E +L+ +
Sbjct: 445 ARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCKDVFNELPDEFGAEVNQLMSL 504
Query: 483 SLEGSVG 489
LEGSVG
Sbjct: 505 KLEGSVG 511
>gi|19552777|ref|NP_600779.1| iron-regulated ABC-type transporter SufB [Corynebacterium
glutamicum ATCC 13032]
gi|62390447|ref|YP_225849.1| component of an uncharacterized iron-regulated ABC-type transporter
[Corynebacterium glutamicum ATCC 13032]
gi|145295688|ref|YP_001138509.1| hypothetical protein cgR_1615 [Corynebacterium glutamicum R]
gi|21324332|dbj|BAB98957.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Corynebacterium glutamicum
ATCC 13032]
gi|41325784|emb|CAF21573.1| component of an uncharacterized iron-regulated ABC-type transporter
[Corynebacterium glutamicum ATCC 13032]
gi|140845608|dbj|BAF54607.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 481
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 197/484 (40%), Positives = 292/484 (60%), Gaps = 18/484 (3%)
Query: 7 TVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T D++ + + Y YG+ + A +GL+ED++R ISAKK+EP+WML+ RL A +
Sbjct: 15 TDDQIIE-SIGPYNYGWHDSDDAGASAQRGLSEDVVRDISAKKSEPEWMLQQRLKALSIF 73
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
P+W IDFD++ Y+ QS +D+ ++ TY+KLGIP E++ L
Sbjct: 74 DKKPVPTWG-ADLSGIDFDNIKYFVRSTEKQA-QSWEDLPEDIKNTYDKLGIPEAEKQRL 131
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
V A ++S V +E+L++ GVIF+ A+ EHP++ ++Y TV+P GD
Sbjct: 132 V------AGVAAQYESEVVYHQIREDLEEKGVIFLDTDTALKEHPEIFQEYFGTVIPAGD 185
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N ++ALNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV Y+E
Sbjct: 186 NKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVE 245
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 246 GCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRTKV-EEG 297
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ W GS +T KYP+ + G + GE S+A + Q D+G KM H+A T+S
Sbjct: 298 GTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAPYTSSN 357
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK ++ G YRG V ++ A HS + +CD+LL+ + + T PY + +N +L
Sbjct: 358 IVSKSVARGGGRAAYRGLVQINANAHHSTSNVECDALLVDDISRSDTYPYNDIRNDHVSL 417
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEAT S++S+E LFY + RG+ EE A+A+IV GFV + ++LPME+A+E +LI++ +E
Sbjct: 418 GHEATVSQVSEEQLFYLMSRGLAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQME 477
Query: 486 GSVG 489
GSVG
Sbjct: 478 GSVG 481
>gi|170768891|ref|ZP_02903344.1| FeS assembly protein SufB [Escherichia albertii TW07627]
gi|170122439|gb|EDS91370.1| FeS assembly protein SufB [Escherichia albertii TW07627]
Length = 508
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCVSEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I EHP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHEHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++
Sbjct: 306 N-SGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSC 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|30265018|ref|NP_847395.1| hypothetical protein BA_5213 [Bacillus anthracis str. Ames]
gi|47530519|ref|YP_021868.1| hypothetical protein GBAA_5213 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187837|ref|YP_031090.1| hypothetical protein BAS4847 [Bacillus anthracis str. Sterne]
gi|65316970|ref|ZP_00389929.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bacillus anthracis str.
A2012]
gi|165870808|ref|ZP_02215460.1| FeS assembly protein SufB [Bacillus anthracis str. A0488]
gi|167634930|ref|ZP_02393248.1| FeS assembly protein SufB [Bacillus anthracis str. A0442]
gi|167639975|ref|ZP_02398243.1| FeS assembly protein SufB [Bacillus anthracis str. A0193]
gi|170685713|ref|ZP_02876936.1| FeS assembly protein SufB [Bacillus anthracis str. A0465]
gi|170706958|ref|ZP_02897415.1| FeS assembly protein SufB [Bacillus anthracis str. A0389]
gi|177652236|ref|ZP_02934739.1| FeS assembly protein SufB [Bacillus anthracis str. A0174]
gi|190567141|ref|ZP_03020056.1| FeS assembly protein SufB [Bacillus anthracis Tsiankovskii-I]
gi|227817750|ref|YP_002817759.1| FeS assembly protein SufB [Bacillus anthracis str. CDC 684]
gi|229601845|ref|YP_002869220.1| FeS assembly protein SufB [Bacillus anthracis str. A0248]
gi|254687311|ref|ZP_05151168.1| FeS assembly protein SufB [Bacillus anthracis str. CNEVA-9066]
gi|254735352|ref|ZP_05193060.1| FeS assembly protein SufB [Bacillus anthracis str. Western North
America USA6153]
gi|254740619|ref|ZP_05198310.1| FeS assembly protein SufB [Bacillus anthracis str. Kruger B]
gi|254753119|ref|ZP_05205155.1| FeS assembly protein SufB [Bacillus anthracis str. Vollum]
gi|254761461|ref|ZP_05213482.1| FeS assembly protein SufB [Bacillus anthracis str. Australia 94]
gi|30259695|gb|AAP28881.1| FeS assembly protein SufB [Bacillus anthracis str. Ames]
gi|47505667|gb|AAT34343.1| FeS assembly protein SufB [Bacillus anthracis str. 'Ames Ancestor']
gi|49181764|gb|AAT57140.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164713317|gb|EDR18842.1| FeS assembly protein SufB [Bacillus anthracis str. A0488]
gi|167512056|gb|EDR87434.1| FeS assembly protein SufB [Bacillus anthracis str. A0193]
gi|167529680|gb|EDR92429.1| FeS assembly protein SufB [Bacillus anthracis str. A0442]
gi|170128061|gb|EDS96931.1| FeS assembly protein SufB [Bacillus anthracis str. A0389]
gi|170670177|gb|EDT20917.1| FeS assembly protein SufB [Bacillus anthracis str. A0465]
gi|172082242|gb|EDT67308.1| FeS assembly protein SufB [Bacillus anthracis str. A0174]
gi|190561645|gb|EDV15615.1| FeS assembly protein SufB [Bacillus anthracis Tsiankovskii-I]
gi|227002532|gb|ACP12275.1| FeS assembly protein SufB [Bacillus anthracis str. CDC 684]
gi|229266253|gb|ACQ47890.1| FeS assembly protein SufB [Bacillus anthracis str. A0248]
Length = 465
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NLGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|215486858|ref|YP_002329289.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli O127:H6 str. E2348/69]
gi|312966836|ref|ZP_07781054.1| feS assembly protein SufB [Escherichia coli 2362-75]
gi|215264930|emb|CAS09316.1| component of SufBCD complex [Escherichia coli O127:H6 str.
E2348/69]
gi|312288300|gb|EFR16202.1| feS assembly protein SufB [Escherichia coli 2362-75]
Length = 495
Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AY WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGHCDDNCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|325676697|ref|ZP_08156371.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
gi|325552479|gb|EGD22167.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
Length = 481
Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 289/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ ++ A +GL+ED++R ISAKKNEPDWML+ RL A R + P W
Sbjct: 23 LGNYEYGWADADVAGASAQRGLSEDVVRDISAKKNEPDWMLDIRLKALRTFDKKPMPHWG 82
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDF ++ Y+ +S +D+ ++ TY+KLGIP E++ L
Sbjct: 83 S-NLDGIDFGNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPEAEKQRLI------AG 134
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHP+L ++Y TV+P GDN ++ALN+A
Sbjct: 135 VAAQYESEVVYHQIREDLEAQGVIFLDTDSGLREHPELFREYFGTVIPAGDNKFSALNTA 194
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 195 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR S + W
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNW-------SNNVYNLVTKRTKVEAGGS-MEWIDGN 306
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA +T+S IVSK ++ G
Sbjct: 307 IGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKSVARG 366
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA S+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 367 GGRASYRGLVQVNKGAHGSKATVKCDALLVDQISRSDTYPYVDVREDDVTMGHEATVSKV 426
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 427 SDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 481
>gi|283785087|ref|YP_003364952.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
gi|282948541|emb|CBG88131.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
Length = 495
Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T ++ D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLRTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AY+ WL M +P W + Y +++ D YY+AP +
Sbjct: 61 LNAYKAWLEMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDACVSQPGAVQQTGASAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVRE--------GREVAVDAIFDSVSVATTYREKLAQQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVKKYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|86148045|ref|ZP_01066347.1| hypothetical protein MED222_16676 [Vibrio sp. MED222]
gi|85834178|gb|EAQ52334.1| hypothetical protein MED222_16676 [Vibrio sp. MED222]
Length = 521
Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats.
Identities = 280/498 (56%), Positives = 362/498 (72%), Gaps = 18/498 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + Y+ GF T + D KG+NE ++R ISAK+NEP+WMLE+RL A
Sbjct: 32 PEIDTQPEVTELLHSSHYREGFYTELSSDTLSKGINEQVVRAISAKRNEPEWMLEFRLKA 91
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS----------LDDVDPELLRT 111
+R+W TM++P W + YP +++ D YY+AP + + + E+
Sbjct: 92 FRKWRTMEEPHWLKADYPDLNYQDYSYYSAPSCSSCDKDSCGKDSDDGSNEFLTEEVETA 151
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+E LGIP+RE S++AVDA+FDSVSV TT++ ELK+ G+IF SEAI E+P+
Sbjct: 152 FETLGIPVRE--------GSEIAVDAIFDSVSVTTTYQNELKELGIIFCSFSEAIQEYPE 203
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LV++YL TVVP DNF+AALN++V +DG+FVYIPKGVRCP ELSTYFRIN+ TGQFERT
Sbjct: 204 LVQQYLGTVVPPEDNFFAALNASVASDGTFVYIPKGVRCPRELSTYFRINQAKTGQFERT 263
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+++ADE SYVSY+EGC+AP RD QLHAAVVE++ AE+KYSTVQNW+ G +GGI
Sbjct: 264 ILVADEDSYVSYIEGCSAPMRDTYQLHAAVVEVIIHKRAEVKYSTVQNWFSGAEDSQGGI 323
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ D+
Sbjct: 324 LNFVTKRAVCEGEYSKMSWTQSETGSAITWKYPSVILKGDYSVGEFFSVALTNGVQQADT 383
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+H+ K++ S I+SKGISAG S N+YRG V V A +RNFTQCDS+LIG CGAH
Sbjct: 384 GTKMVHIGKHSRSTIISKGISAGKSQNSYRGLVKVTPNAEGARNFTQCDSMLIGAECGAH 443
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T PYIE KN S ++EHEATTS+I + LFYC QRGI E+ AI++IVNGF ++V +LP+E
Sbjct: 444 TFPYIEVKNPSAHVEHEATTSRIGQDQLFYCTQRGISEDNAISMIVNGFCKDVFSELPLE 503
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKL+ ISLE SVG
Sbjct: 504 FAVEAQKLLSISLEHSVG 521
>gi|256832372|ref|YP_003161099.1| FeS assembly protein SufB [Jonesia denitrificans DSM 20603]
gi|256685903|gb|ACV08796.1| FeS assembly protein SufB [Jonesia denitrificans DSM 20603]
Length = 481
Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 289/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ ++ A +GL+ED++R IS KNEP+WML+ RL A R + P+W
Sbjct: 23 IGSYEYGWHDADLAGQNAQRGLSEDVVRRISGMKNEPEWMLKQRLKALRLFDKKPMPNWG 82
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ + D++ E+ TY++LGIP E++ L
Sbjct: 83 S-DLSGIDFDNIKYFVRSTEKQA-TTWDELPEEIKNTYDRLGIPEAEKQRLV------AG 134
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ + E+P++ ++Y +V+P GDN +AALN+A
Sbjct: 135 VAAQYESEVVYHQIREDLEEQGVIFVDTDTGLREYPEVFEQYFGSVIPAGDNKFAALNTA 194
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 195 VWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYKT 254
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA ++Y+T+QNW +YN VTKR + + W
Sbjct: 255 DSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKR-ATAAEGATMEWVDGN 306
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA + Q D+G KM+H A T+S IVSK ++ G
Sbjct: 307 IGSKVTMKYPAIYLMGEHARGETLSIAFAGEGQHQDAGAKMVHAAPRTSSSIVSKSVARG 366
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V GA HS + CD+LL+ + T PY++ + + HEAT S++
Sbjct: 367 GGRTSYRGLVQVLEGAEHSASNVLCDALLVDQISRSDTYPYVDVREDDVTMGHEATVSRV 426
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 427 SEDQLFYLMSRGMEETEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGSVG 481
>gi|83815188|ref|YP_445511.1| cysteine desulfurase activator complex subunit SufB [Salinibacter
ruber DSM 13855]
gi|83756582|gb|ABC44695.1| FeS assembly protein SufB [Salinibacter ruber DSM 13855]
Length = 503
Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats.
Identities = 295/494 (59%), Positives = 383/494 (77%), Gaps = 11/494 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+++ ET + ++ + YK+GF T+I+ + AP+G ED++R+IS +K+EP W+ +WRL
Sbjct: 16 LMSTSET-EYLKGKASEDYKHGFYTDIEAETAPEGFTEDVVRYISERKDEPQWLRDWRLK 74
Query: 61 AYRRWLTM----KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
A+R + WA + Y A FD++ Y++APK +SLD+V E+L T+E+LG
Sbjct: 75 AFRHARNRLDSGETIDWAHLDYEAPKFDEISYFSAPKETASYESLDEVPDEILETFERLG 134
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
IP+ EQ+ L G VAVDAV DSVSV TTFK++L++ GVIF EA EHP++V++Y
Sbjct: 135 IPLEEQKALTG-----VAVDAVMDSVSVATTFKDKLEEKGVIFKSFGEAAKEHPEIVREY 189
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ TV+P DN YAA+NSAVF+DGSFVY+P+GV CPMELSTYFRINE GTGQFERTLI+A+
Sbjct: 190 MGTVIPYTDNLYAAINSAVFSDGSFVYVPEGVTCPMELSTYFRINEAGTGQFERTLIVAE 249
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFV 295
G+YVSYLEGCTAP R ENQLHAAVVELVA ++AEIKYST+QNWYPGD G+GG+YN V
Sbjct: 250 PGAYVSYLEGCTAPMRKENQLHAAVVELVAHEDAEIKYSTIQNWYPGDPDTGEGGVYNLV 309
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKRG C+G SKISWTQLETGSA+T KYPS +L G+ S GEFYS+A + G QQ D+GTKM
Sbjct: 310 TKRGLCKGDNSKISWTQLETGSAVTQKYPSVILAGDDSVGEFYSVAFTKGHQQADTGTKM 369
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+ K+T S I+SKGISA ++N+YRG+V V + A ++RNF+QCDS+L+G +CGAHT PY
Sbjct: 370 QHIGKDTKSTIISKGISADVADNSYRGQVKVSKNADNARNFSQCDSMLLGPDCGAHTYPY 429
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
IES N S +EHEATTSK+ ++ +FYC QRG+ EE A+ LIVNGF +EVLQ+LPMEFAVE
Sbjct: 430 IESNNPSAQIEHEATTSKVGEDQMFYCHQRGLGEEEALKLIVNGFCQEVLQELPMEFAVE 489
Query: 476 AQKLIDISLEGSVG 489
A++L+DI LEGSVG
Sbjct: 490 AKELLDIELEGSVG 503
>gi|299830562|ref|YP_003735010.1| iron-sulfur cluster formation ABC transporter [Durinskia baltica]
gi|297384926|gb|ADI40225.1| iron-sulfur cluster formation ABC transporter [Durinskia baltica]
Length = 486
Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats.
Identities = 294/479 (61%), Positives = 375/479 (78%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ K+ Y+YGF TNI+ D KGLNE +R IS KK E ++LE+RL AY++W M +
Sbjct: 13 ITKLVNQTYQYGFSTNIEKDIIEKGLNETTVRLISEKKQESAFLLEFRLKAYKKWKQMIE 72
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA ++ P I++ D+ YY+APKS + L++VDPELL+T+EKLGI + EQ+ LA
Sbjct: 73 PEWAYLKLPQINYQDVTYYSAPKSQKKLKDLNEVDPELLKTFEKLGISLTEQKRLA---- 128
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VA+DAVFDSVS+ TTFKEEL K+GVIF ISEAI E+P+L++KYL +VVP+GDN+++A
Sbjct: 129 -NVAIDAVFDSVSIGTTFKEELSKAGVIFSSISEAITEYPELIEKYLGSVVPIGDNYFSA 187
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVFTDGSF YIP+ CP++LSTYFRIN++ GQFERTLIIA++ SYV+YLEGCTAP
Sbjct: 188 LNSAVFTDGSFCYIPQDTICPLDLSTYFRINDQNAGQFERTLIIAEKNSYVNYLEGCTAP 247
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
Q D NQLHAA+VEL+A +NA I YSTVQNWY GD G GGIYNFVTKRG C G SKISW
Sbjct: 248 QYDTNQLHAAIVELIAFENATINYSTVQNWYSGDEFGNGGIYNFVTKRGLCAGANSKISW 307
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGS+ITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKMLH+ +N+ SRI+SKG
Sbjct: 308 TQVETGSSITWKYPSCILMGDNSQGEFYSVALTNNYQQADTGTKMLHIGQNSRSRIISKG 367
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
ISAG S N+YRG V+V A +RN++QCDSLLIGN A+T PYI +NS+ +EHEA+
Sbjct: 368 ISAGKSKNSYRGFVNVTNKAIGARNYSQCDSLLIGNLSNANTFPYISVQNSTTKIEHEAS 427
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSKI +E +FY LQRGI E A+ L+++GF RE+ +LP+EFA EA KL+ + LEGSVG
Sbjct: 428 TSKIGEEQIFYFLQRGICLEKAVELMISGFCREIFTELPLEFAAEADKLLTLKLEGSVG 486
>gi|163942694|ref|YP_001647578.1| FeS assembly protein SufB [Bacillus weihenstephanensis KBAB4]
gi|229014168|ref|ZP_04171289.1| hypothetical protein bmyco0001_45730 [Bacillus mycoides DSM 2048]
gi|229062647|ref|ZP_04199956.1| hypothetical protein bcere0026_47130 [Bacillus cereus AH603]
gi|229135807|ref|ZP_04264577.1| hypothetical protein bcere0014_46900 [Bacillus cereus BDRD-ST196]
gi|229169701|ref|ZP_04297401.1| hypothetical protein bcere0007_46450 [Bacillus cereus AH621]
gi|163864891|gb|ABY45950.1| FeS assembly protein SufB [Bacillus weihenstephanensis KBAB4]
gi|228613740|gb|EEK70865.1| hypothetical protein bcere0007_46450 [Bacillus cereus AH621]
gi|228647673|gb|EEL03738.1| hypothetical protein bcere0014_46900 [Bacillus cereus BDRD-ST196]
gi|228716617|gb|EEL68314.1| hypothetical protein bcere0026_47130 [Bacillus cereus AH603]
gi|228747122|gb|EEL97004.1| hypothetical protein bmyco0001_45730 [Bacillus mycoides DSM 2048]
Length = 465
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPEEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ GV+F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEDLGVVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVQFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|261343988|ref|ZP_05971633.1| FeS assembly protein SufB [Providencia rustigianii DSM 4541]
gi|282568379|gb|EFB73914.1| FeS assembly protein SufB [Providencia rustigianii DSM 4541]
Length = 499
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 285/501 (56%), Positives = 368/501 (73%), Gaps = 25/501 (4%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E ++V+ +D +YK GF T + D+ KGLNED++R ISAK+NEP+WML++RL A+
Sbjct: 7 EVGEEVQSWLDEKRYKEGFFTQVATDEMAKGLNEDVVRAISAKRNEPEWMLQFRLDAFNH 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DDVDPEL 108
W M++P W + YP +D+ D YY+AP + + + E+
Sbjct: 67 WKGMEEPHWLKANYPNLDYQDYSYYSAPSCGACDDTCGSQSGATQTTGAVEENNYLTAEV 126
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+++LG+P+RE S VAVDA+FDSVSV TT++ +L K G+IF EAI E
Sbjct: 127 EDAFKQLGVPVRE--------GSAVAVDAIFDSVSVSTTYRGDLAKHGIIFCSFGEAIHE 178
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+P+LV+KYL +VV DNF+AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQF
Sbjct: 179 YPELVQKYLGSVVSSHDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQF 238
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
ERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 239 ERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGDSEA 298
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ
Sbjct: 299 GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILKGDNSVGEFFSVALTNGNQQ 358
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG C
Sbjct: 359 ADTGTKMIHIGKNTRSTIISKGISAGKSQNSYRGLVKILPSAHNARNFTQCDSMLIGTQC 418
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
GAHT PY+E KN++ +LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +L
Sbjct: 419 GAHTFPYVEVKNNTAHLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSEL 478
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
P+EFAVEAQKL+ ISLE SVG
Sbjct: 479 PLEFAVEAQKLLAISLEHSVG 499
>gi|169826152|ref|YP_001696310.1| ABC transporter subunit [Lysinibacillus sphaericus C3-41]
gi|168990640|gb|ACA38180.1| yurU; ABC transporter subunit [Lysinibacillus sphaericus C3-41]
Length = 471
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 288/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF ++ + ++ +GL E+I+R IS K EP+WMLE+RL A + T P W
Sbjct: 13 DIGDYKYGFHDKDVSIFRSKRGLTEEIVREISNMKQEPEWMLEYRLKALETFYTKPMPQW 72
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 73 GG-DLGDLDFDEITYYVKPSEATQ-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 124
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K++L+ G++F A+ E+ D+ K+Y V+P DN +AALNS
Sbjct: 125 -VSAQYESEVVYHNMKQDLEDLGIVFKDTDSALRENEDIFKQYWGKVIPYTDNKFAALNS 183
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P GV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 184 AVWSGGSFIYVPPGVKVETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 243
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE+V +A +Y+T+QNW +YN VTKR + W
Sbjct: 244 TNSLHSAVVEIVVRKDAYCRYTTIQNWA-------NNVYNLVTKRTVV-EENGTMEWIDG 295
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L+GE + G SIA++ Q +G KM+H+A NT+S IVSK I+
Sbjct: 296 NIGSKLTMKYPACILKGEGARGMTLSIALAGKGQHQHAGAKMIHMAPNTSSTIVSKSIAK 355
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TY G+V A+ +R +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 356 QGGKVTYMGQVRFGPKASGARANIECDTLIMDNQSTSDTIPYNEILNDNVSLEHEAKVSK 415
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 416 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 471
>gi|47567016|ref|ZP_00237733.1| FeS assembly protein sufB [Bacillus cereus G9241]
gi|49481038|ref|YP_038998.1| iron-regulated ABC transporter [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140554|ref|YP_086275.1| iron-regulated ABC transporter [Bacillus cereus E33L]
gi|118480063|ref|YP_897214.1| FeS assembly protein SufB [Bacillus thuringiensis str. Al Hakam]
gi|196032787|ref|ZP_03100200.1| FeS assembly protein SufB [Bacillus cereus W]
gi|196040468|ref|ZP_03107768.1| FeS assembly protein SufB [Bacillus cereus NVH0597-99]
gi|196043828|ref|ZP_03111065.1| FeS assembly protein SufB [Bacillus cereus 03BB108]
gi|206970492|ref|ZP_03231445.1| FeS assembly protein SufB [Bacillus cereus AH1134]
gi|218906172|ref|YP_002454006.1| FeS assembly protein SufB [Bacillus cereus AH820]
gi|225866950|ref|YP_002752328.1| FeS assembly protein SufB [Bacillus cereus 03BB102]
gi|228917606|ref|ZP_04081150.1| hypothetical protein bthur0012_48120 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228923711|ref|ZP_04086989.1| hypothetical protein bthur0011_46860 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228930002|ref|ZP_04093013.1| hypothetical protein bthur0010_46840 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936276|ref|ZP_04099075.1| hypothetical protein bthur0009_47140 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948704|ref|ZP_04110982.1| hypothetical protein bthur0007_48280 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228955246|ref|ZP_04117254.1| hypothetical protein bthur0006_46040 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228961225|ref|ZP_04122845.1| hypothetical protein bthur0005_46730 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228988221|ref|ZP_04148318.1| hypothetical protein bthur0001_48790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229049671|ref|ZP_04194228.1| hypothetical protein bcere0027_46290 [Bacillus cereus AH676]
gi|229072469|ref|ZP_04205671.1| hypothetical protein bcere0025_46300 [Bacillus cereus F65185]
gi|229082228|ref|ZP_04214691.1| hypothetical protein bcere0023_48450 [Bacillus cereus Rock4-2]
gi|229087494|ref|ZP_04219627.1| hypothetical protein bcere0022_40590 [Bacillus cereus Rock3-44]
gi|229094083|ref|ZP_04225167.1| hypothetical protein bcere0021_47980 [Bacillus cereus Rock3-42]
gi|229112424|ref|ZP_04241962.1| hypothetical protein bcere0018_46640 [Bacillus cereus Rock1-15]
gi|229124514|ref|ZP_04253699.1| hypothetical protein bcere0016_47980 [Bacillus cereus 95/8201]
gi|229130237|ref|ZP_04259196.1| hypothetical protein bcere0015_46730 [Bacillus cereus BDRD-Cer4]
gi|229153171|ref|ZP_04281350.1| hypothetical protein bcere0011_47010 [Bacillus cereus m1550]
gi|229158575|ref|ZP_04286634.1| hypothetical protein bcere0010_47480 [Bacillus cereus ATCC 4342]
gi|229181278|ref|ZP_04308608.1| hypothetical protein bcere0005_46200 [Bacillus cereus 172560W]
gi|229187216|ref|ZP_04314361.1| hypothetical protein bcere0004_47520 [Bacillus cereus BGSC 6E1]
gi|229193260|ref|ZP_04320211.1| hypothetical protein bcere0002_49070 [Bacillus cereus ATCC 10876]
gi|254725323|ref|ZP_05187106.1| FeS assembly protein SufB [Bacillus anthracis str. A1055]
gi|296505416|ref|YP_003667116.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
gi|300119646|ref|ZP_07057188.1| FeS assembly protein SufB [Bacillus cereus SJ1]
gi|301056467|ref|YP_003794678.1| putative iron-regulated ABC transporter [Bacillus anthracis CI]
gi|47556334|gb|EAL14668.1| FeS assembly protein sufB [Bacillus cereus G9241]
gi|49332594|gb|AAT63240.1| probable iron-regulated ABC transporter [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51974023|gb|AAU15573.1| probable iron-regulated ABC transporter [Bacillus cereus E33L]
gi|118419288|gb|ABK87707.1| Iron-regulated ABC transporter membrane component SufB [Bacillus
thuringiensis str. Al Hakam]
gi|195994216|gb|EDX58171.1| FeS assembly protein SufB [Bacillus cereus W]
gi|196025164|gb|EDX63834.1| FeS assembly protein SufB [Bacillus cereus 03BB108]
gi|196028600|gb|EDX67207.1| FeS assembly protein SufB [Bacillus cereus NVH0597-99]
gi|206735069|gb|EDZ52238.1| FeS assembly protein SufB [Bacillus cereus AH1134]
gi|218536534|gb|ACK88932.1| FeS assembly protein SufB [Bacillus cereus AH820]
gi|225787466|gb|ACO27683.1| FeS assembly protein SufB [Bacillus cereus 03BB102]
gi|228590237|gb|EEK48105.1| hypothetical protein bcere0002_49070 [Bacillus cereus ATCC 10876]
gi|228596226|gb|EEK53901.1| hypothetical protein bcere0004_47520 [Bacillus cereus BGSC 6E1]
gi|228602171|gb|EEK59662.1| hypothetical protein bcere0005_46200 [Bacillus cereus 172560W]
gi|228624889|gb|EEK81657.1| hypothetical protein bcere0010_47480 [Bacillus cereus ATCC 4342]
gi|228630270|gb|EEK86920.1| hypothetical protein bcere0011_47010 [Bacillus cereus m1550]
gi|228653170|gb|EEL09049.1| hypothetical protein bcere0015_46730 [Bacillus cereus BDRD-Cer4]
gi|228658854|gb|EEL14509.1| hypothetical protein bcere0016_47980 [Bacillus cereus 95/8201]
gi|228671072|gb|EEL26378.1| hypothetical protein bcere0018_46640 [Bacillus cereus Rock1-15]
gi|228689295|gb|EEL43114.1| hypothetical protein bcere0021_47980 [Bacillus cereus Rock3-42]
gi|228695818|gb|EEL48670.1| hypothetical protein bcere0022_40590 [Bacillus cereus Rock3-44]
gi|228700660|gb|EEL53183.1| hypothetical protein bcere0023_48450 [Bacillus cereus Rock4-2]
gi|228710445|gb|EEL62418.1| hypothetical protein bcere0025_46300 [Bacillus cereus F65185]
gi|228722584|gb|EEL73972.1| hypothetical protein bcere0027_46290 [Bacillus cereus AH676]
gi|228771518|gb|EEM19987.1| hypothetical protein bthur0001_48790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228798431|gb|EEM45424.1| hypothetical protein bthur0005_46730 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228804379|gb|EEM50990.1| hypothetical protein bthur0006_46040 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228811011|gb|EEM57354.1| hypothetical protein bthur0007_48280 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228823392|gb|EEM69225.1| hypothetical protein bthur0009_47140 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829682|gb|EEM75308.1| hypothetical protein bthur0010_46840 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228835840|gb|EEM81203.1| hypothetical protein bthur0011_46860 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228842086|gb|EEM87189.1| hypothetical protein bthur0012_48120 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|296326468|gb|ADH09396.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
gi|298722941|gb|EFI63841.1| FeS assembly protein SufB [Bacillus cereus SJ1]
gi|300378636|gb|ADK07540.1| probable iron-regulated ABC transporter [Bacillus cereus biovar
anthracis str. CI]
Length = 465
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|261822006|ref|YP_003260112.1| cysteine desulfurase activator complex subunit SufB [Pectobacterium
wasabiae WPP163]
gi|261606019|gb|ACX88505.1| FeS assembly protein SufB [Pectobacterium wasabiae WPP163]
Length = 499
Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats.
Identities = 296/509 (58%), Positives = 372/509 (73%), Gaps = 30/509 (5%)
Query: 1 MVAVRETVDKVRKIDV----DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M R TVD + + +YK GF T ++ D+ G+NED++R ISAK+NEP+WMLE
Sbjct: 1 MA--RSTVDVPDDVQIWMGDGRYKEGFFTQLETDELAHGINEDVVRAISAKRNEPEWMLE 58
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL--------------- 101
+RL AY+ WL M++P W + +Y +D+ D YY+AP S
Sbjct: 59 FRLNAYKAWLEMEEPHWLKAQYEKLDYQDYSYYSAPSCGNCDDSCGSEPGAKQQSGITDV 118
Query: 102 -DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + E+ + +LG+P+RE KVAVDA+FDSVSV TT++ EL + G+IF
Sbjct: 119 NNYLTSEVENAFNQLGVPVRE--------GQKVAVDAIFDSVSVATTYRHELAEKGIIFC 170
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
SEAI EHPDLV++YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRI
Sbjct: 171 SFSEAIQEHPDLVRQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRI 230
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
N TGQFERT++IAD+ SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW
Sbjct: 231 NAAKTGQFERTILIADDDSYVSYIEGCSAPVRDTYQLHAAVVEVIINKNAEVKYSTVQNW 290
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G +GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+
Sbjct: 291 FSGKDDAEGGILNFVTKRALCAGEHSKMSWTQSETGSAITWKYPSVILRGDYSVGEFFSV 350
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A++NG QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + AA++RNFTQCD
Sbjct: 351 ALTNGRQQADTGTKMIHIGKNTRSTIISKGISAGRSENTYRGLVKIMPSAANARNFTQCD 410
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+LIG+ CGAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF
Sbjct: 411 SMLIGSECGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGF 470
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 471 CKDVFSELPLEFAVEAQKLLAISLEHSVG 499
>gi|237731311|ref|ZP_04561792.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
sp. 30_2]
gi|226906850|gb|EEH92768.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
sp. 30_2]
Length = 508
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 373/504 (74%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V YK GF T +Q D+ KG+NED++R ISAK+NEPDWMLE+R
Sbjct: 14 MSRNTEATDDVNTWAGGHLNYKEGFFTQLQTDELAKGINEDVVRAISAKRNEPDWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A++ WLTM++P W + Y +++ + YY+AP ++
Sbjct: 74 LNAFKAWLTMEEPHWLKAHYDKLNYQEYSYYSAPSCGNCDETCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++++L + G+IF EA
Sbjct: 134 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVK+YL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPELVKQYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 246 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDG 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNYTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|253989388|ref|YP_003040744.1| cysteine desulfurase activator complex subunit SufB [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780838|emb|CAQ84000.1| SUF system FeS cluster assembly, SufB [Photorhabdus asymbiotica]
Length = 492
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 287/495 (57%), Positives = 372/495 (75%), Gaps = 20/495 (4%)
Query: 6 ETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D V+ D +YK GF T + D+ KGLNE+++R ISAK+NEP+WMLE+RL AYR
Sbjct: 7 EISDDVQTWLSDHRYKEGFFTQVATDELAKGLNEEVVRAISAKRNEPEWMLEFRLKAYRH 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------DDVDPELLRTYEK 114
W M++P W + YP +D+ D YY+AP S + + E+ ++K
Sbjct: 67 WQGMEEPHWLKANYPNLDYQDYSYYSAPSCGTCDDSCSSQSGAEQTNNYLTAEIEEAFDK 126
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P+RE E+ VAVDA+FDSVSV TT++++L K G+IF SEAI ++P+LV+
Sbjct: 127 LGVPVREGEV--------VAVDAIFDSVSVSTTYRDKLAKEGIIFCSFSEAIQDYPELVQ 178
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
KYL +VV DNF+AALNSAV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++I
Sbjct: 179 KYLGSVVASHDNFFAALNSAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILI 238
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G G+GGI NF
Sbjct: 239 ADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGG-DGEGGILNF 297
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VTKR C G +K+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG Q+ D+GTK
Sbjct: 298 VTKRALCEGENAKMSWTQSETGSAITWKYPSVILKGDNSIGEFFSVALTNGTQRADTGTK 357
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H+ +NT S I+SKGISAG S N+YRG V + GA ++RN+TQCDS+LIG CGAHT P
Sbjct: 358 MIHIGRNTKSTIISKGISAGCSQNSYRGLVKILPGAENARNYTQCDSMLIGTECGAHTFP 417
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y+E +N++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAV
Sbjct: 418 YVEVQNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAV 477
Query: 475 EAQKLIDISLEGSVG 489
EAQKL+ ISLE SVG
Sbjct: 478 EAQKLLAISLEHSVG 492
>gi|159038851|ref|YP_001538104.1| FeS assembly protein SufB [Salinispora arenicola CNS-205]
gi|157917686|gb|ABV99113.1| FeS assembly protein SufB [Salinispora arenicola CNS-205]
Length = 476
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 292/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y+YG+ ++ A +GLNE ++R ISAKK EP WML+ RL R + P+W
Sbjct: 18 LGRYEYGWADPDVAGAVAQRGLNEAVVRDISAKKAEPAWMLDLRLKGLRLFDRKPMPAWG 77
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 78 -ADLTGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGIPEAEKQRLV------AG 129
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +++L++ GV+F+ A+ EH DL K+Y TV+PVGDN +AALN+A
Sbjct: 130 VAAQYESEVVYHKIRDDLEEQGVVFLDTDTALKEHEDLFKEYFGTVIPVGDNKFAALNTA 189
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 190 VWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYSS 249
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 250 DSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVCH-EGATMEWIDGN 301
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A+S Q D+G KM+H A +T+S IVSK I+
Sbjct: 302 IGSKVTMKYPAVFMTGEHAKGEVLSVAMSGEGQHQDAGAKMVHAAPHTSSTIVSKSIARS 361
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V G+ SR+ +CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 362 GGRTSYRGLVQVLEGSHSSRSTVKCDALLVDTISRSDTYPYVDIREDDVSMGHEATVSKV 421
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 422 SEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 476
>gi|188494456|ref|ZP_03001726.1| FeS assembly protein SufB [Escherichia coli 53638]
gi|188489655|gb|EDU64758.1| FeS assembly protein SufB [Escherichia coli 53638]
Length = 495
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLVTDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD-------------VD 105
L AYR WL M++P W + Y +++ D YY+AP + +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASESGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|332279168|ref|ZP_08391581.1| cysteine desulfurase activator complex subunit SufB [Shigella sp.
D9]
gi|332101520|gb|EGJ04866.1| cysteine desulfurase activator complex subunit SufB [Shigella sp.
D9]
Length = 508
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVR PMELSTYFRIN + T
Sbjct: 186 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRYPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLAISLEHSVG 508
>gi|30023019|ref|NP_834650.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
gi|29898579|gb|AAP11851.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
Length = 465
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
+ GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+ LA NT+S IVSK I+
Sbjct: 290 DIGSKLTMKYPAVILKGEGARGLTSSIAIAGKGQHQDAGAKMIQLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|152977254|ref|YP_001376771.1| FeS assembly protein SufB [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026006|gb|ABS23776.1| FeS assembly protein SufB [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 206/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL A ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISHMKEEPKWMLDFRLKALDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|262340814|ref|YP_003283669.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272151|gb|ACY40059.1| cysteine desulfurase activator complex subunit [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 481
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 302/487 (62%), Positives = 383/487 (78%), Gaps = 7/487 (1%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+++ + +YKYGF T I+ DK P GLNED+IR I+ KKNEP WML+WRL +Y
Sbjct: 1 MKKNRKILENFTDSEYKYGFYTPIESDKIPMGLNEDVIRLITEKKNEPTWMLDWRLESYH 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W M+ P WA IRY F ++ YY+APK + L++VD EL+ T+EKLG+PI E++
Sbjct: 61 IWKKMESPKWANIRYNVPKFQEISYYSAPKKKINLNKLEEVDTELINTFEKLGVPIEERK 120
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
+G+ T D V DSVS+ TTF+++L++ G+IF I++A+ ++PD+V+KYL +VV
Sbjct: 121 NFSGIAT-----DIVLDSVSLTTTFQKKLEEKGIIFCSINDALKKYPDIVRKYLGSVVSK 175
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNFYAALNSAVF+DGSF YIPKGVRCPMELSTYFRINE GTGQFERTLIIAD+ SYVSY
Sbjct: 176 TDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINENGTGQFERTLIIADKDSYVSY 235
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTA QR ENQLHAAVVE++AL+N+E+KYSTVQNW+PG+ QG+GG++NFVTKRG C
Sbjct: 236 LEGCTASQRKENQLHAAVVEIIALENSEVKYSTVQNWFPGNKQGEGGVFNFVTKRGLC-E 294
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
++KISW Q+ETGS+ITWKYPSC+L+G+ S G+FYS+A++ FQQ D+GTKM+H+ K T
Sbjct: 295 KKAKISWIQVETGSSITWKYPSCILKGDFSMGKFYSLALTKDFQQADTGTKMIHIGKYTK 354
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS-S 422
S I+SKGISAG + N YRG V + A HSRNF+QCDSLLIG+ CGAHT PYI N+ +
Sbjct: 355 SVIISKGISAGKAQNNYRGLVKISPQAIHSRNFSQCDSLLIGDQCGAHTFPYIHVSNNST 414
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKI +E +FYC QRGI E AI+LIV+GF RE+L+KLPMEFAVEAQKL++I
Sbjct: 415 SQVEHEATTSKIGEEQIFYCNQRGINTEKAISLIVHGFSREILKKLPMEFAVEAQKLLEI 474
Query: 483 SLEGSVG 489
SLEGSVG
Sbjct: 475 SLEGSVG 481
>gi|118411024|ref|YP_874419.1| iron-sulfur cluster formation ABC transporter [Phaeodactylum
tricornutum]
gi|116739771|gb|ABK20642.1| iron-sulfur cluster formation ABC transporter [Phaeodactylum
tricornutum]
Length = 486
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 295/491 (60%), Positives = 376/491 (76%), Gaps = 7/491 (1%)
Query: 1 MVAVRETV--DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
MV V + + Y+YGF T I+ D KGLNE I IS KK E ++L +R
Sbjct: 1 MVNKSNKVLNKNITNLVNQTYQYGFSTTIEKDIIEKGLNEKTIHLISQKKKETKFLLNFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L AY++W M +P WA I++P ID+ D+ YY+APKS + L +VDPELL+T+EKLGI
Sbjct: 61 LKAYKKWKQMPEPEWAYIKFPQIDYQDVIYYSAPKSQKKLKDLSEVDPELLKTFEKLGIS 120
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ EQ+ LA VAVD VFDSVS+ TTFKEEL KSGVIF ISEA+ E+P+L++KYL
Sbjct: 121 LTEQKRLA-----NVAVDVVFDSVSIGTTFKEELNKSGVIFSSISEAVTEYPELIEKYLG 175
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+VVP+GDN++AALNSAVFTDGSF YIP+ CP++LSTYFRIN++ +GQFERTLII+++
Sbjct: 176 SVVPIGDNYFAALNSAVFTDGSFCYIPEDTICPLDLSTYFRINDEKSGQFERTLIISEKN 235
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S V+YLEGCTAPQ D NQLHAAVVEL+AL+NA IKYSTVQNWY G+ GKGG+YNFVTKR
Sbjct: 236 SQVNYLEGCTAPQYDSNQLHAAVVELIALENANIKYSTVQNWYAGNEFGKGGVYNFVTKR 295
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G C G SKISWTQ+ETGS+ITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 296 GLCAGSSSKISWTQVETGSSITWKYPSCVLIGDNSQGEFYSVALTNNYQQADTGTKMMHI 355
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+NT SRI+SKGISAG S N+YRG V+V A +RN++QCDSLLIG+ A+T P+I
Sbjct: 356 GRNTRSRIISKGISAGKSKNSYRGLVNVTSKALGARNYSQCDSLLIGDLSNANTFPFISV 415
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+NS+ +EHEA+TSKI +E +FY LQRGI E A+ L+++GF RE+ +LP+EFA EA K
Sbjct: 416 QNSTTKIEHEASTSKIGEEQIFYFLQRGICLEKAVELMISGFCREIFTELPLEFAAEADK 475
Query: 479 LIDISLEGSVG 489
L+ + LEGSVG
Sbjct: 476 LLTLKLEGSVG 486
>gi|260597664|ref|YP_003210235.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
turicensis z3032]
gi|260216841|emb|CBA30350.1| Protein sufB [Cronobacter turicensis z3032]
Length = 496
Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats.
Identities = 288/505 (57%), Positives = 369/505 (73%), Gaps = 25/505 (4%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E D V YK GF T +Q D+ G+NE+++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSRNSEATDDVNTWSGPLNYKEGFFTRLQTDELANGINEEVVRAISAKRNEPEWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS---------------IVGPQSLDDV 104
AYR WL M++P W Y +++ D YY+AP G + +
Sbjct: 61 SAYRAWLEMEEPHWLHAHYDKLNYQDYSYYSAPSCGHCDDACASQPGAVQQPGGNNNSYL 120
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
E+ + +LG+P+RE +VAVDA+FDSVSV TT++++L + G+IF E
Sbjct: 121 TQEVEEAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGE 172
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI +HP+LVKKY+ TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN +
Sbjct: 173 AIHDHPELVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEK 232
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 233 TGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGD 292
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEFYS+A+++
Sbjct: 293 NN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSIGEFYSVALTS 351
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LI
Sbjct: 352 GHQQADTGTKMIHIGKNTKSTIISKGISAGKSQNSYRGLVKIMPTATNARNFTQCDSMLI 411
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G +CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 GPDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDV 471
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 FSELPLEFAVEAQKLLAISLEHSVG 496
>gi|320161199|ref|YP_004174423.1| protein SufB [Anaerolinea thermophila UNI-1]
gi|319995052|dbj|BAJ63823.1| protein SufB [Anaerolinea thermophila UNI-1]
Length = 470
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 204/490 (41%), Positives = 294/490 (60%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + + + +D QY+YGF V K+ KGL+ +++ IS K EP WMLE+RL
Sbjct: 1 MANSPQN-EFLEALD--QYRYGFSDPETYVFKSRKGLDREVVEQISRMKGEPQWMLEFRL 57
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A +L P+W +D +D+YYY P G +S DDV + T+ +LGIP
Sbjct: 58 KALDHFLKRPMPTWG-ADLSDLDLNDIYYYVKPTDKEG-RSWDDVPATIKETFTRLGIPE 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LAG V A ++S V + +E L+K GVIF+ I + + +HPDL ++Y T
Sbjct: 116 AEQKFLAG-------VGAQYESEMVYHSIQEHLEKQGVIFLSIEDGLRKHPDLFREYFGT 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP+ DN +AALNSAV++ GSFVY+PKGV+ + L YFR+N GQFERTLIIADEG+
Sbjct: 169 VVPIEDNKFAALNSAVWSGGSFVYVPKGVKVDLPLQAYFRLNVANIGQFERTLIIADEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAPQ + H+ V+E+V A ++Y+T+QNW +YN VT+R
Sbjct: 229 QVHYVEGCTAPQYTTDSFHSGVIEIVVKRGARVRYTTIQNW-------SNNVYNLVTQRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
G + W GS +T KYPSC L + GE SIA + Q D+G K++H A
Sbjct: 282 VVYGD-GVMEWVDANLGSKVTMKYPSCYLMEPGARGEILSIAFAGKGQHQDAGGKVIHFA 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S+I SK IS +YRG + V++GA R+ CD+LL+ + + T PYIE
Sbjct: 341 PHTSSKITSKSISKSGGRTSYRGLLKVYKGAEGVRSNVVCDALLLDDKSRSDTYPYIEID 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEA+ SK+ +E LFY + RG+ EE A ++V+GF+ ++++LPME+AVE +L
Sbjct: 401 EEDVTIGHEASVSKVGEEQLFYLMSRGLSEEEATTMVVSGFIEPLVKELPMEYAVEMNRL 460
Query: 480 IDISLEGSVG 489
I + +EGS+G
Sbjct: 461 IQLQMEGSIG 470
>gi|55982659|gb|AAV69746.1| putative ABC transporter subunit [Phaeodactylum tricornutum]
Length = 486
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 294/491 (59%), Positives = 375/491 (76%), Gaps = 7/491 (1%)
Query: 1 MVAVRETV--DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
MV V + + Y+YGF T I+ D KGLNE I IS KK E ++L +R
Sbjct: 1 MVNKSNKVLNKNITNLVNQTYQYGFSTTIEKDIIEKGLNEKTIHLISQKKKETKFLLNFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L AY++W M +P WA I++P ID+ D+ YY+APKS + L +VDPELL+T+EKLGI
Sbjct: 61 LKAYKKWKQMPEPEWAYIKFPQIDYQDVIYYSAPKSQKKLKDLSEVDPELLKTFEKLGIS 120
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ EQ+ LA VAVD VFDS S+ TTFKEEL KSGVIF ISEA+ E+P+LV+KYL
Sbjct: 121 LTEQKRLA-----NVAVDVVFDSASIGTTFKEELNKSGVIFSSISEAVTEYPELVEKYLG 175
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+VVP+GDN++AALNSAVFTDGSF YIP+ CP++LSTYFRIN++ +GQFERTLII+++
Sbjct: 176 SVVPIGDNYFAALNSAVFTDGSFCYIPEDTICPLDLSTYFRINDEKSGQFERTLIISEKN 235
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S V+YLEGCTAPQ D NQLHAAVVEL+AL+NA IKYSTVQNWY G+ GKGG+YNFVTKR
Sbjct: 236 SQVNYLEGCTAPQYDSNQLHAAVVELIALENANIKYSTVQNWYAGNEFGKGGVYNFVTKR 295
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G C G SKISWTQ+ETGS+ITWKYPSC+L G+ S GEFYS+A++N +QQ D+GTKM+H+
Sbjct: 296 GLCAGSSSKISWTQVETGSSITWKYPSCVLIGDNSQGEFYSVALTNNYQQADTGTKMMHI 355
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+NT SRI+SKGISAG S N+YRG V+V A +RN++QCDSLLIG+ A+T P+I
Sbjct: 356 GRNTRSRIISKGISAGKSKNSYRGLVNVTSKALGARNYSQCDSLLIGDLSNANTFPFISV 415
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+NS+ +EHEA+TSKI +E +FY LQRGI E A+ L+++GF RE+ +LP+EFA EA +
Sbjct: 416 QNSTTKIEHEASTSKIGEEQIFYFLQRGICLEKAVELMISGFCREIFTELPLEFAAEADR 475
Query: 479 LIDISLEGSVG 489
L+ + LEGSVG
Sbjct: 476 LLTLKLEGSVG 486
>gi|256825168|ref|YP_003149128.1| Iron-regulated ABC transporter membrane component SufB [Kytococcus
sedentarius DSM 20547]
gi|256688561|gb|ACV06363.1| Iron-regulated ABC transporter membrane component SufB [Kytococcus
sedentarius DSM 20547]
Length = 483
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 189/476 (39%), Positives = 285/476 (59%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +Y+YG+ + A +GL+E ++ I+ +K EP+WM RL A + + P W
Sbjct: 24 DLGRYEYGWHDSDDAGATAQRGLSEAVVEDITTRKGEPEWMRTMRLKALKLFDRKPMPHW 83
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDF ++ Y+ D++ ++ TY+KLGIP E++ L
Sbjct: 84 GS-DLSDIDFQNIKYFVKSTEKQATS-WDELPQDIKDTYDKLGIPEAEKQRLI------A 135
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L++ GVIF+ A+ EH DL +++ +V+P GDN ++ALN+
Sbjct: 136 GVAAQYESEVVYHQIREDLEEKGVIFVDTDTALREHEDLFREHFGSVIPSGDNKFSALNT 195
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGS V Y+EGCTAP
Sbjct: 196 AVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSSVHYVEGCTAPIYQ 255
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ NA+++Y+T+QNW +YN VTKR C + + W
Sbjct: 256 SDSLHSAVVEIIVKKNAKVRYTTIQNW-------SNNVYNLVTKRATC-AEGATMEWIDG 307
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ L GE + GE S+A + Q D+G KM+H A +TTS IVSK ++
Sbjct: 308 NIGSKVTMKYPAVFLMGEHANGETLSVAFAGEGQHQDAGAKMVHNAPHTTSSIVSKSVAR 367
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G +YRG V V GA SR+ CD+LL+ + T PY++ + + HEAT SK
Sbjct: 368 GGGRTSYRGLVQVAEGAYGSRSSVVCDALLVDQISRSDTYPYVDIREDDVQMGHEATVSK 427
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ +FY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 428 VSEDQMFYLMSRGVSETEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 483
>gi|317124832|ref|YP_004098944.1| Iron-regulated ABC transporter membrane component SufB
[Intrasporangium calvum DSM 43043]
gi|315588920|gb|ADU48217.1| Iron-regulated ABC transporter membrane component SufB
[Intrasporangium calvum DSM 43043]
Length = 473
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 192/476 (40%), Positives = 296/476 (62%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +Y+YG+ +++ A +GLNE+++R ISA+K+EP+WM + RL + P+W
Sbjct: 14 DIGRYEYGWADSDAAGSSARRGLNEEVVRDISARKSEPEWMTKLRLKGLSLFGKKPMPAW 73
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDF ++ Y+ + D++ ++ TY++LGIP E++ L
Sbjct: 74 GS-DLTGIDFQNIKYFVKSTEKQA-TTWDELPEDIKNTYDRLGIPEAEKQRLV------S 125
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L++ GVIF+ A+ +H DL +++ +TV+P GDN +A+LN+
Sbjct: 126 GVAAQYESEVVYHQIREDLEEQGVIFLDTDSALKQHEDLFREHFATVIPAGDNKFASLNT 185
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 186 AVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYK 245
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ NA ++Y+T+QNW +YN VTKR C + + W
Sbjct: 246 SDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKRAVC-EEGATMEWVDG 297
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ L GE + GE SIA + Q D+G+KM+H A NT S I+SK ++
Sbjct: 298 NIGSKVTMKYPAVFLMGEHAKGETLSIAFAGEGQHQDTGSKMVHAAPNTKSSIISKSVAR 357
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G +YRG V V GA HS + +CD+LL+ + T PY++ + ++ HEAT SK
Sbjct: 358 GGGRASYRGLVQVLEGAHHSASTVRCDALLVDTISRSDTYPYVDIREDDVSMGHEATVSK 417
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 418 VSEDQLFYLMSRGMAEDEAMAMIVRGFIEPIARELPMEYALELNRLIELQMEGAVG 473
>gi|239636559|ref|ZP_04677561.1| FeS assembly protein SufB [Staphylococcus warneri L37603]
gi|239597914|gb|EEQ80409.1| FeS assembly protein SufB [Staphylococcus warneri L37603]
gi|330684923|gb|EGG96605.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU121]
Length = 465
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 294/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+R IS K+EP+WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVREISKMKDEPEWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ DL ++Y +TV+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEDLFREYFATVIPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|218900134|ref|YP_002448545.1| FeS assembly protein SufB [Bacillus cereus G9842]
gi|228903484|ref|ZP_04067609.1| hypothetical protein bthur0014_46450 [Bacillus thuringiensis IBL
4222]
gi|228910819|ref|ZP_04074628.1| hypothetical protein bthur0013_49610 [Bacillus thuringiensis IBL
200]
gi|228942147|ref|ZP_04104687.1| hypothetical protein bthur0008_47780 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228968097|ref|ZP_04129102.1| hypothetical protein bthur0004_48820 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228975076|ref|ZP_04135635.1| hypothetical protein bthur0003_48240 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981716|ref|ZP_04142011.1| hypothetical protein bthur0002_48750 [Bacillus thuringiensis Bt407]
gi|229032618|ref|ZP_04188582.1| hypothetical protein bcere0028_46550 [Bacillus cereus AH1271]
gi|229076355|ref|ZP_04209320.1| hypothetical protein bcere0024_46590 [Bacillus cereus Rock4-18]
gi|229099438|ref|ZP_04230367.1| hypothetical protein bcere0020_46560 [Bacillus cereus Rock3-29]
gi|229105595|ref|ZP_04236229.1| hypothetical protein bcere0019_47240 [Bacillus cereus Rock3-28]
gi|229118451|ref|ZP_04247805.1| hypothetical protein bcere0017_47180 [Bacillus cereus Rock1-3]
gi|229163957|ref|ZP_04291897.1| hypothetical protein bcere0009_47200 [Bacillus cereus R309803]
gi|218543906|gb|ACK96300.1| FeS assembly protein SufB [Bacillus cereus G9842]
gi|228619578|gb|EEK76464.1| hypothetical protein bcere0009_47200 [Bacillus cereus R309803]
gi|228665021|gb|EEL20509.1| hypothetical protein bcere0017_47180 [Bacillus cereus Rock1-3]
gi|228677865|gb|EEL32108.1| hypothetical protein bcere0019_47240 [Bacillus cereus Rock3-28]
gi|228683934|gb|EEL37883.1| hypothetical protein bcere0020_46560 [Bacillus cereus Rock3-29]
gi|228706790|gb|EEL58998.1| hypothetical protein bcere0024_46590 [Bacillus cereus Rock4-18]
gi|228728703|gb|EEL79715.1| hypothetical protein bcere0028_46550 [Bacillus cereus AH1271]
gi|228777828|gb|EEM26100.1| hypothetical protein bthur0002_48750 [Bacillus thuringiensis Bt407]
gi|228784597|gb|EEM32617.1| hypothetical protein bthur0003_48240 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228791588|gb|EEM39185.1| hypothetical protein bthur0004_48820 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228817481|gb|EEM63566.1| hypothetical protein bthur0008_47780 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228848770|gb|EEM93615.1| hypothetical protein bthur0013_49610 [Bacillus thuringiensis IBL
200]
gi|228856169|gb|EEN00704.1| hypothetical protein bthur0014_46450 [Bacillus thuringiensis IBL
4222]
gi|326942798|gb|AEA18694.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 465
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|269218370|ref|ZP_06162224.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212229|gb|EEZ78569.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 483
Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats.
Identities = 197/488 (40%), Positives = 296/488 (60%), Gaps = 18/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFETNIQVDK-APKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
A++E + + +Y YG+ + + + A +GL+ED++R+IS+ KNEP+WML+ RL A
Sbjct: 13 AIQEQQQTIDALG-QKYNYGWHDSDEAGRNARRGLDEDVVRYISSAKNEPEWMLKNRLKA 71
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
R + P W IDFD+ Y+ D++ ++ TY++LGIP E
Sbjct: 72 LRLFERRPMPVWGP-DLSFIDFDEYKYFVRSTDKPAAS-WDELPEDIKNTYDRLGIPEAE 129
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S V +++L+ GV+F+ A+ + PDL +++ TVV
Sbjct: 130 KARLV------AGVAAQYESEVVYNQIRDDLESQGVVFLDTDSALKQCPDLFREHFGTVV 183
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P GDN +A+LN+AV++ GSF+Y+PKGVR + L YFRIN + GQFERTLIIADEGSYV
Sbjct: 184 PAGDNKFASLNTAVWSGGSFIYVPKGVRVDIPLQAYFRINTESMGQFERTLIIADEGSYV 243
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+A+VE++ +A ++Y+T+QNW + N VT+R
Sbjct: 244 HYVEGCTAPIYQSDSLHSAIVEIIVKKDAHVRYTTIQNW-------SNNVLNLVTQRAAV 296
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS + KYPSC+L GE + GE S A + Q D+G KM+HLA +
Sbjct: 297 -AAGATMEWVDGNIGSRVNMKYPSCVLLGEHAHGEALSAAFAGPDQHQDTGAKMIHLAPH 355
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
TTS IVSK IS G ++YRG V + A S++ CD+LL+ + T PY++ +
Sbjct: 356 TTSSIVSKSISRGGGRSSYRGLVQIGEEAQGSKSSVVCDALLVDDISRTDTYPYVDVRTD 415
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ HEAT SK+S++ LFY QRG+ EE A+A++V GFV + ++LPME+A+E +LI+
Sbjct: 416 DVEMGHEATVSKVSEDQLFYLQQRGLSEEEAMAMVVRGFVEPIARELPMEYALELNRLIE 475
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 476 LQMEGSVG 483
>gi|75760712|ref|ZP_00740736.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491796|gb|EAO54988.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 475
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 17 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 76
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 77 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 128
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 129 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 187
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 188 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 247
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 248 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 299
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 300 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 359
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 360 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 419
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 420 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 475
>gi|256018123|ref|ZP_05431988.1| cysteine desulfurase activator complex subunit SufB [Shigella sp.
D9]
Length = 495
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVR PMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRYPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|262202310|ref|YP_003273518.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
gi|262085657|gb|ACY21625.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
Length = 485
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 190/475 (40%), Positives = 289/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ ++ A +GL++ ++ IS+KKNEP+WMLE RL A R + P W
Sbjct: 27 LGNYGYGWSDSDVAGASAQRGLSDAVVADISSKKNEPEWMLEQRLKALRIFDRKPMPHWG 86
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ + D++ ++ TY++LGIP E++ L
Sbjct: 87 -AELDGIDFDNIKYFVRSTEKQA-TTWDELPEDIKNTYDRLGIPEAEKQRLV------AG 138
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ + EHP++ ++Y +V+P GDN ++ALN+A
Sbjct: 139 VAAQYESEVVYHQIREDLEQQGVIFLDTDTGLKEHPEIFQEYFGSVIPAGDNKFSALNTA 198
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 199 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKT 258
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE+V +Y+T+QNW +YN VTKR + + W
Sbjct: 259 DSLHSAVVEIVVKKGGRCRYTTIQNW-------SNNVYNLVTKRAKAEA-GATMEWIDGN 310
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A + Q D+G+KM+HLA NT+S IVSK ++ G
Sbjct: 311 IGSKVTMKYPAVWLTGEHAKGEVLSVAFAGEGQHQDTGSKMVHLAPNTSSNIVSKSVARG 370
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG + V+ GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 371 GGRASYRGLIKVNSGAHGSRSTVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 430
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 SDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 485
>gi|251798584|ref|YP_003013315.1| FeS assembly protein SufB [Paenibacillus sp. JDR-2]
gi|247546210|gb|ACT03229.1| FeS assembly protein SufB [Paenibacillus sp. JDR-2]
Length = 465
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 217/476 (45%), Positives = 302/476 (63%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+++ YKYGF + V ++ KGL E+I+R IS KNEP WMLE+RL + ++ M P+W
Sbjct: 7 EMEDYKYGFRDEHKAVFQSGKGLTEEIVRTISEMKNEPQWMLEFRLKSLEQFNKMPMPNW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DMADLDFNDIQYYVKPSEKQG-KTWEEVPQEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +E+L+K GVIF + A+ E+PDLVK+Y ST++P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMQEDLEKQGVIFTDMDTALREYPDLVKEYFSTIIPRTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEVPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEILVKKNARCRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KMLHLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGRGAKGMVLSIAVAGKGQHQDAGAKMLHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R + S++ +CD+L++ N + TIPY E N + LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRNSEGSKSNIKCDTLILDNESTSDTIPYNEIMNDNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGLSEAEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|126652017|ref|ZP_01724206.1| hypothetical protein BB14905_11240 [Bacillus sp. B14905]
gi|126591107|gb|EAZ85217.1| hypothetical protein BB14905_11240 [Bacillus sp. B14905]
Length = 465
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 287/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF ++ + ++ +GL E+I+R IS K EP+WMLE+RL A + P W
Sbjct: 7 DIGDYKYGFHDKDVSIFRSKRGLTEEIVREISNMKQEPEWMLEYRLKALETFYAKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLGDLDFDEITYYVKPSEATQ-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K++L+ G++F A+ E+ D+ K+Y V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKQDLEDLGIVFKDTDSALRENEDIFKQYWGKVIPYTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P GV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPPGVKVETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE+V +A +Y+T+QNW +YN VTKR + W
Sbjct: 238 TNSLHSAVVEIVVRKDAYCRYTTIQNWA-------NNVYNLVTKRTVV-EENGTMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L+GE + G SIA++ Q +G KM+H+A NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPACILKGEGARGMTLSIALAGKGQHQHAGAKMIHMAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TY G+V A+ +R +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYMGQVRFGPKASGARANIECDTLIMDNQSTSDTIPYNEILNDNVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|116670650|ref|YP_831583.1| FeS assembly protein SufB [Arthrobacter sp. FB24]
gi|116610759|gb|ABK03483.1| Iron-regulated ABC transporter membrane component SufB
[Arthrobacter sp. FB24]
Length = 487
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 204/490 (41%), Positives = 298/490 (60%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ E ++K ++ + Y+YG+ V A +G+N++++R ISAKKNEP+WML+ RL
Sbjct: 14 TVISEILEKNPELHGIGTYEYGWADKNDVGANARRGINDEVVRDISAKKNEPEWMLDLRL 73
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +D+ ++ TYEKLGIP
Sbjct: 74 KGLKYFDRKPMPTWG-ADLSGIDFDNIKYFVRSTEKQAAT-WEDLPEDIRNTYEKLGIPE 131
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L V A ++S V +E+L+ GVIF+ A+ EHP++ ++Y T
Sbjct: 132 AERSRLV------SGVAAQYESEVVYHQIREDLEAQGVIFLDTDTALREHPEIFQEYFGT 185
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++PVGDN +A+LN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE S
Sbjct: 186 IIPVGDNKFASLNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEDS 245
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A ++Y+T+QNW +YN VTKR
Sbjct: 246 YVHYIEGCTAPIYTSDSLHSAVVEIIVKKGARVRYTTIQNW-------SNNVYNLVTKRA 298
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A
Sbjct: 299 IC-EEGATMEWIDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKMVHIA 357
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT S IVSK ++ G YRG V V GA HS N +CD+LL+ + T PYI+ +
Sbjct: 358 PNTKSSIVSKSVARGGGRAAYRGLVQVREGAKHSANTVRCDALLVDTISRSDTYPYIDIR 417
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
L HEAT S++S+E LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +L
Sbjct: 418 EDDVQLGHEATVSRVSEEQLFYLMSRGMREDEAMAMIVRGFIEPIARELPMEYALELNRL 477
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 478 IELQMEGSVG 487
>gi|229020217|ref|ZP_04176989.1| hypothetical protein bcere0030_47080 [Bacillus cereus AH1273]
gi|229026443|ref|ZP_04182800.1| hypothetical protein bcere0029_47200 [Bacillus cereus AH1272]
gi|229175676|ref|ZP_04303184.1| hypothetical protein bcere0006_47530 [Bacillus cereus MM3]
gi|228607817|gb|EEK65131.1| hypothetical protein bcere0006_47530 [Bacillus cereus MM3]
gi|228734906|gb|EEL85544.1| hypothetical protein bcere0029_47200 [Bacillus cereus AH1272]
gi|228741057|gb|EEL91283.1| hypothetical protein bcere0030_47080 [Bacillus cereus AH1273]
Length = 465
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPEEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVQFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|218709889|ref|YP_002417510.1| hypothetical protein VS_1902 [Vibrio splendidus LGP32]
gi|218322908|emb|CAV19085.1| Protein sufB [Vibrio splendidus LGP32]
Length = 530
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 280/498 (56%), Positives = 362/498 (72%), Gaps = 18/498 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + Y+ GF T + D KG+NE ++R ISAK+NEP+WMLE+RL A
Sbjct: 41 PEIDTQPEVTELLQSGHYREGFYTELSSDTLSKGINEQVVRAISAKRNEPEWMLEFRLKA 100
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------DDVDPELLRT 111
+R+W TM++P W + YP +++ D YY+AP + + + E+
Sbjct: 101 FRKWRTMEEPHWLKADYPDLNYQDYSYYSAPSCSSCDKDSCDKDSDDGSNEFLTEEVETA 160
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+E LGIP+RE S++AVDA+FDSVSV TT++ ELK+ G+IF SEAI E+P+
Sbjct: 161 FETLGIPVRE--------GSEIAVDAIFDSVSVTTTYQNELKELGIIFCSFSEAIQEYPE 212
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LV++YL TVVP DNF+AALN++V +DG+FVYIPKGVRCP ELSTYFRIN+ TGQFERT
Sbjct: 213 LVQQYLGTVVPPEDNFFAALNASVASDGTFVYIPKGVRCPRELSTYFRINQAKTGQFERT 272
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+++ADE SYVSY+EGC+AP RD QLHAAVVE++ AE+KYSTVQNW+ G +GGI
Sbjct: 273 ILVADEDSYVSYIEGCSAPMRDTYQLHAAVVEVIIHKRAEVKYSTVQNWFSGAEDSQGGI 332
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ D+
Sbjct: 333 LNFVTKRAVCEGEYSKMSWTQSETGSAITWKYPSVILKGDYSVGEFFSVALTNGVQQADT 392
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
GTKM+H+ K++ S I+SKGISAG S N+YRG V V A +RNFTQCDS+LIG CGAH
Sbjct: 393 GTKMVHIGKHSRSTIISKGISAGKSQNSYRGLVKVTPNAEGARNFTQCDSMLIGAECGAH 452
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T PYIE KN S ++EHEATTS+I + LFYC QRGI E+ AI++IVNGF ++V +LP+E
Sbjct: 453 TFPYIEVKNPSAHVEHEATTSRIGQDQLFYCTQRGISEDNAISMIVNGFCKDVFSELPLE 512
Query: 472 FAVEAQKLIDISLEGSVG 489
FAVEAQKL+ ISLE SVG
Sbjct: 513 FAVEAQKLLSISLEHSVG 530
>gi|323443778|gb|EGB01390.1| FeS assembly protein SufB [Staphylococcus aureus O46]
Length = 465
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 7 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKP-SEQAQRSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|183982279|ref|YP_001850570.1| hypothetical protein MMAR_2266 [Mycobacterium marinum M]
gi|183175605|gb|ACC40715.1| conserved protein [Mycobacterium marinum M]
Length = 481
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 200/497 (40%), Positives = 295/497 (59%), Gaps = 24/497 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ-------YKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPD 52
M E + D+ Y YG+ + A +GL+E ++R ISAKKNEP+
Sbjct: 1 MTLTPEAKTAAEPLTQDEAIASLGNYGYGWSDSDAAGAAAQRGLSEAVVRDISAKKNEPE 60
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
WML+ RL A R + P+W IDFD++ Y+ DD+ ++ TY
Sbjct: 61 WMLQTRLKALRIFERKPMPNWGS-NLAGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTY 118
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++LGIP E++ L V A ++S V +E+L+ GVIF+ + EHP++
Sbjct: 119 DRLGIPEAEKQRLV------AGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLREHPEI 172
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
K+Y TV+P GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTL
Sbjct: 173 FKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTL 232
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
IIADEGSYV Y+EGCTAP + LH+AVVE++ +A ++Y+T+QNW +Y
Sbjct: 233 IIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNNVY 285
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N VTKR + + W GS +T KYP+ + GE + GE S+A + Q D+G
Sbjct: 286 NLVTKRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTG 344
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
KMLHLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ + T
Sbjct: 345 AKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDT 404
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPME+
Sbjct: 405 YPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEY 464
Query: 473 AVEAQKLIDISLEGSVG 489
A+E +LI++ +EG+VG
Sbjct: 465 ALELNRLIELQMEGAVG 481
>gi|146311417|ref|YP_001176491.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
sp. 638]
gi|145318293|gb|ABP60440.1| Iron-regulated ABC transporter membrane component SufB
[Enterobacter sp. 638]
Length = 495
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 291/504 (57%), Positives = 369/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V YK GF T +Q D+ KG+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVNTWSGGHLNYKEGFFTQLQTDELAKGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A+R WL M++P W + Y +D+ D YY+AP +
Sbjct: 61 LSAFRAWLEMEEPHWLKAHYKHLDYQDYSYYSAPSCGSCDDTCASQPGAVQQTGENSYLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE +VAVDA+FDSVSV TT++ +L + G+IF EA
Sbjct: 121 KEVEEAFEQLGVPVRE--------GREVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLVK+Y+ TVVP DNF+AALN+AV +DG+F+YIPKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVKQYIGTVVPSNDNFFAALNAAVASDGTFIYIPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDG 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N++ LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 TDCGAHTFPYVECRNNTAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|167462635|ref|ZP_02327724.1| hypothetical protein Plarl_08760 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381719|ref|ZP_08055676.1| FeS cluster formation-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154309|gb|EFX46628.1| FeS cluster formation-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 465
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 206/476 (43%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF + V + KGL +I+ IS K EPDWMLE+RL + ++ M P W
Sbjct: 7 ELGEYKYGFRDEHKAVFQTGKGLTPEIVTEISRMKGEPDWMLEFRLKSLEQFFKMPLPRW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-NLDDLDFNDIQYYVKPSEKQG-KTWEEVPAEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + ++EL+ GVIF A+ E+P+L K+Y TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMQKELEAQGVIFTDTDTALREYPELFKEYFGTVVPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLII DE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEVPLQAYFRINSENMGQFERTLIITDEDSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ N+ +Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIICRKNSRARYTTIQNWAP-------NIYNLVTKRAVA-EEGANMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KM+H A TTS I+SK IS
Sbjct: 290 NIGSKLTMKYPAVILKGRGAKGSVLSIAVAGKGQHQDAGAKMIHQAPETTSTIISKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R + ++ +CD+L++ + TIPY E +N + LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRNSEGAKANIKCDTLIMDKESTSDTIPYNEIRNDNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGLTEAEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|253577643|ref|ZP_04854952.1| FeS assembly protein SufB [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251842970|gb|EES71009.1| FeS assembly protein SufB [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 465
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 211/476 (44%), Positives = 298/476 (62%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF + + ++ KGL +I+ IS K EP+WML +RL + ++ M P W
Sbjct: 7 ELEEYKYGFRDEHKAIFQSGKGLTREIVTEISRIKGEPEWMLNFRLKSLEQFEKMPLPRW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFNDIQYYVKPSEKQG-KTWEEVPAEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +++L+ GVIFM A+ E+P+L K+Y TVVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSIQKDLEDQGVIFMDTDSALREYPELFKEYFGTVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADEGS+V Y EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEVPLQAYFRINSENMGQFERTLIIADEGSFVHYTEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A ++Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIIVKKDARVRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KM+HLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGRGAKGSVLSIAVAGKGQLQDAGAKMIHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R A +++ +CD+L++ N + TIPY E N + LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRQAEGAKSNIKCDTLILDNESTSDTIPYNEIMNDNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGLTEEEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|320104747|ref|YP_004180338.1| Iron-regulated ABC transporter membrane component SufB [Isosphaera
pallida ATCC 43644]
gi|319752029|gb|ADV63789.1| Iron-regulated ABC transporter membrane component SufB [Isosphaera
pallida ATCC 43644]
Length = 473
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 202/491 (41%), Positives = 289/491 (58%), Gaps = 20/491 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET--NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + +V I + YKYGF + K+ KGL E+ + IS KNEPDWM E+R
Sbjct: 1 MSTDLDLASQVAGI-NESYKYGFRDSEDHYAFKSGKGLTEETVHQISEMKNEPDWMREFR 59
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L + + P+W +DFDD++Y+ G +S DDV E+ T+++LGIP
Sbjct: 60 LKSLAAFRAKPLPTWGG-DLSELDFDDIHYFVKATDRQG-KSWDDVPAEIKNTFDRLGIP 117
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E++ LAG V A ++S V + +E+L GVIF+ A+ ++PDLV++Y
Sbjct: 118 EAERKFLAG-------VGAQYESEVVYHSLREDLAAKGVIFVDTDTAVRDYPDLVREYFG 170
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
T++P DN +AALNSAV++ GSFVYIP GV+ + L YFRIN + GQFERTLII +EG
Sbjct: 171 TIIPYTDNKFAALNSAVWSGGSFVYIPAGVKVDIPLQAYFRINAENMGQFERTLIIVEEG 230
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ V Y+EGCTAP LH+AVVE++ +Y+T+QNW IYN VTKR
Sbjct: 231 AQVHYVEGCTAPIYTSESLHSAVVEIIVKKGGRCRYTTIQNWA-------NNIYNLVTKR 283
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ + + W GS +T KYP+ L G + GE SIA + Q D+G K++H
Sbjct: 284 AVAQ-EDALMEWVDGNLGSRLTMKYPAVYLTGPGARGEILSIAFAGKGQHQDAGGKVVHA 342
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +T+SRI+SK IS ++YRG + V GA S++ CD+L++ + T P IE
Sbjct: 343 APHTSSRIISKSISKDGGRSSYRGLLKVVDGAKGSKSNVVCDALILDPRSRSDTYPTIEI 402
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ HEA+ SKI +E LFY + RG+ E A LIV+GF+ ++++LPME+AVE K
Sbjct: 403 DEEDAKIGHEASVSKIGEEQLFYLMSRGLSEAEASTLIVSGFIEPLVKELPMEYAVEMNK 462
Query: 479 LIDISLEGSVG 489
LI++ +EGSVG
Sbjct: 463 LIELQMEGSVG 473
>gi|37526512|ref|NP_929856.1| cysteine desulfurase activator complex subunit SufB [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36785943|emb|CAE14995.1| SufB protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 498
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 289/501 (57%), Positives = 370/501 (73%), Gaps = 26/501 (5%)
Query: 6 ETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D V+ D +YK GF T + D+ KGL+ED++R ISAK+NEP+WMLE+RL AYR
Sbjct: 7 EISDDVQTWLSDHRYKEGFFTQVATDELAKGLSEDVVRAISAKRNEPEWMLEFRLEAYRH 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD----------------VDPEL 108
WL M++P W + YP +D+ D YY+AP S + + E+
Sbjct: 67 WLGMEEPHWLKANYPNLDYQDYSYYSAPSCGACSDSCNSQSGAVQGTGSEQANSYLTAEI 126
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
T++KLG+P+RE E VAVDA+FDSVSV TT++++L K G+IF SEAI E
Sbjct: 127 EETFDKLGVPVREGEA--------VAVDAIFDSVSVSTTYRDKLAKEGIIFCSFSEAIQE 178
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+P LV+KYL +VV DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQF
Sbjct: 179 YPGLVRKYLGSVVASHDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQF 238
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
ERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 239 ERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFSGG-DSA 297
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
GGI NFVTKR C G +K+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ
Sbjct: 298 GGILNFVTKRALCEGENAKMSWTQSETGSAITWKYPSVILKGDNSIGEFFSVALTNGTQQ 357
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+GTKM+H+ +NT S I+SKGISAG S N+YRG V + GA ++RN+TQCDS+LIG C
Sbjct: 358 ADTGTKMIHIGRNTKSTIISKGISAGRSQNSYRGLVKILPGAENARNYTQCDSMLIGTEC 417
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
GAHT PY+E +N++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +L
Sbjct: 418 GAHTFPYVEVQNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSEL 477
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
P+EFAVEAQKL+ ISLE SVG
Sbjct: 478 PLEFAVEAQKLLAISLEHSVG 498
>gi|302206223|gb|ADL10565.1| FeS assembly protein SufB [Corynebacterium pseudotuberculosis C231]
gi|308276465|gb|ADO26364.1| FeS assembly protein SufB [Corynebacterium pseudotuberculosis I19]
Length = 484
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 203/486 (41%), Positives = 289/486 (59%), Gaps = 18/486 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
T D++ + + Y YG+ + A +GL+ED++R ISA+KNEP+WMLE RL A
Sbjct: 16 PSTDDEIIE-SMGPYNYGWHDSDEAGQNARRGLDEDVVRHISAQKNEPEWMLEQRLKALN 74
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W I+FDD YY + DD+ ++ TY+KLGIP E++
Sbjct: 75 TFEKKPMPTWGP-DLSFINFDDFKYYVRSTEKQA-TTWDDLPEDIKNTYDKLGIPEAEKQ 132
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y TVVP
Sbjct: 133 RLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALREHPELFREYFGTVVPA 186
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN ++ALNSAV++ GSFVY+PKGV + L YFRIN + GQFERTLII DEG+YV Y
Sbjct: 187 GDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHY 246
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP + LH+AVVE++ NA +Y+T+QNW + N VT+R
Sbjct: 247 VEGCTAPIYQSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVLNLVTQRSKV-E 298
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + W GS IT KYP+ + G + GE S A + Q D+G KM H+A T+
Sbjct: 299 EGATMEWVDGNIGSKITMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDTGAKMQHMAPYTS 358
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSK ++ YRG V V A HS + +CD+LL+ N + T PY + +N
Sbjct: 359 SNIVSKSVARSGGRAAYRGLVRVSANAHHSVSNVECDALLVDNISRSDTYPYNDIRNDHV 418
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+L HEAT S++S++ LFY RGI E+ A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 419 SLGHEATVSQVSEKQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQ 478
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 479 MEGSVG 484
>gi|70727036|ref|YP_253950.1| hypothetical protein SH2035 [Staphylococcus haemolyticus JCSC1435]
gi|123776126|sp|Q4L4T1|Y2035_STAHJ RecName: Full=UPF0051 protein SH2035
gi|68447760|dbj|BAE05344.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 465
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+R IS K EP+WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVREISKMKEEPEWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKPSEHTQ-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L K+Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEELFKEYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|38233880|ref|NP_939647.1| hypothetical protein DIP1295 [Corynebacterium diphtheriae NCTC
13129]
gi|38200141|emb|CAE49822.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 459
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 202/475 (42%), Positives = 285/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQVDK-APKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ + + K A +GL+ED++R+ISA+KNEP+WMLE RL A + P+W
Sbjct: 1 MGPYNYGWHDSDEAGKKARRGLDEDVVRYISAQKNEPEWMLEQRLKALNTFEKKPMPTWG 60
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
I+FDD YY + DD+ ++ TY+KLGIP E++ L
Sbjct: 61 P-DLSYINFDDFKYYVRSTEKQA-TTWDDLPEDIKNTYDKLGIPEAEKQRLV------AG 112
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ A+ EHP+L ++Y TVVP GDN ++ALNSA
Sbjct: 113 VAAQYESEVVYHQIREDLETQGVIFLDTDTALKEHPELFQEYFGTVVPAGDNKFSALNSA 172
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+PKGV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 173 VWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYQS 232
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA +Y+T+QNW + N VT+R + W
Sbjct: 233 DSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVLNLVTQRSKV-EEGGTMEWVDGN 284
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + G + GE S A + Q D+G KM H+A T+S IVSK ++
Sbjct: 285 IGSKVTMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDTGAKMQHMAPYTSSNIVSKSVARS 344
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V V A HS + +CD+LL+ N + T PY + +N +L HEAT S++
Sbjct: 345 GGRAAYRGLVRVAANAHHSVSNVECDALLVDNISRSDTYPYNDIRNDHVSLGHEATVSQV 404
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY RGI E+ A+A+IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 405 SEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG 459
>gi|238782564|ref|ZP_04626595.1| hypothetical protein yberc0001_22140 [Yersinia bercovieri ATCC
43970]
gi|238716491|gb|EEQ08472.1| hypothetical protein yberc0001_22140 [Yersinia bercovieri ATCC
43970]
Length = 489
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 288/490 (58%), Positives = 365/490 (74%), Gaps = 23/490 (4%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + D+ KG+NED+IR ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 9 VSDGRYKEGFFTQLATDELAKGINEDVIRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD--------------PELLRTYEKLGIPI 119
+ Y ++D+ D YY+AP S D E+ + +LG+P+
Sbjct: 69 LKAHYKSLDYQDYSYYSAPSCGSCDDSCDSQPGAVQQSSAESDYLTAEVESAFAQLGVPV 128
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
RE ++VAVDA+FDSVSV TT++ +L + G+IF EAI E+PDLV++YL +
Sbjct: 129 RE--------GAEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQEYPDLVRQYLGS 180
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IADEGS
Sbjct: 181 VVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADEGS 240
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI NFVTKR
Sbjct: 241 YVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKYSTVQNWFAGTES-TGGILNFVTKRA 299
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG+QQ D+GTKM+H+
Sbjct: 300 LCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTNGYQQADTGTKMIHIG 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT PY+E +
Sbjct: 360 KNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPDSGAHTFPYVEVR 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEAQKL
Sbjct: 420 NNSAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEAQKL 479
Query: 480 IDISLEGSVG 489
+ ISLE SVG
Sbjct: 480 LAISLEHSVG 489
>gi|311031782|ref|ZP_07709872.1| FeS assembly protein SufB [Bacillus sp. m3-13]
Length = 465
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 199/476 (41%), Positives = 295/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF+ ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 EIGDYKYGFKDKDVSIFRSGRGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNSLNFDEITYYVKPSEKSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L+ GV+F A+ E+ D+ +++ + V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMQEDLEDLGVVFKDTDTALKENEDIFREHFAKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVCEA-NATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V + A+ +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGKKASGARSNIECDTLIMDNQSTSDTIPYNEVFNDNVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|282910494|ref|ZP_06318298.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282325886|gb|EFB56194.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|312438721|gb|ADQ77792.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
TCH60]
Length = 465
Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats.
Identities = 210/479 (43%), Positives = 294/479 (61%), Gaps = 18/479 (3%)
Query: 12 RKIDVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M
Sbjct: 4 KSPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPM 63
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P W ++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 64 PQWGG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG--- 118
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AA
Sbjct: 119 ----VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAA 174
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 175 LNSAVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAP 234
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 235 VYTTSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEW 286
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK
Sbjct: 287 VDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKS 346
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA
Sbjct: 347 ISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAK 406
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SK+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 407 VSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|148267281|ref|YP_001246224.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus JH9]
gi|150393331|ref|YP_001316006.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus JH1]
gi|147740350|gb|ABQ48648.1| Iron-regulated ABC transporter membrane component SufB
[Staphylococcus aureus subsp. aureus JH9]
gi|149945783|gb|ABR51719.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus JH1]
Length = 465
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 294/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV +YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 7 DVGEYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|258448949|ref|ZP_05697058.1| hypothetical protein SAHG_02530 [Staphylococcus aureus A6224]
gi|257857845|gb|EEV80737.1| hypothetical protein SAHG_02530 [Staphylococcus aureus A6224]
Length = 465
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 7 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIAD+G+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADQGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|294507397|ref|YP_003571455.1| FeS assembly protein SufB [Salinibacter ruber M8]
gi|294343725|emb|CBH24503.1| FeS assembly protein SufB [Salinibacter ruber M8]
Length = 487
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 295/493 (59%), Positives = 382/493 (77%), Gaps = 11/493 (2%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
++ ET + ++ + YK+GF T+I+ + AP+G ED++R+IS +K+EP W+ +WRL A
Sbjct: 1 MSTSET-EYLKGKASEDYKHGFYTDIEAETAPEGFTEDVVRYISERKDEPQWLRDWRLKA 59
Query: 62 YRRWLTM----KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
+R + WA + Y A FD++ Y++APK +SLD+V E+L T+E+LGI
Sbjct: 60 FRHARDRLDSGETIDWAHLDYEAPKFDEISYFSAPKETASYESLDEVPDEILETFERLGI 119
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P+ EQ+ L G VAVDAV DSVSV TTFK++L++ GVIF EA EHP++V++Y+
Sbjct: 120 PLEEQKALTG-----VAVDAVMDSVSVATTFKDKLEEKGVIFKSFGEAAKEHPEIVREYM 174
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TV+P DN YAA+NSAVF+DGSFVY+P+GV CPMELSTYFRINE GTGQFERTLI+A+
Sbjct: 175 GTVIPYTDNLYAAINSAVFSDGSFVYVPEGVTCPMELSTYFRINEAGTGQFERTLIVAEP 234
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVT 296
G+YVSYLEGCTAP R ENQLHAAVVELVA ++AEIKYST+QNWYPGD G+GG+YN VT
Sbjct: 235 GAYVSYLEGCTAPMRKENQLHAAVVELVAHEDAEIKYSTIQNWYPGDPDTGEGGVYNLVT 294
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRG C+G SKISWTQLETGSA+T KYPS +L G+ S GEFYS+A + G QQ D+GTKM
Sbjct: 295 KRGLCKGDNSKISWTQLETGSAVTQKYPSVILAGDDSVGEFYSVAFTKGHQQADTGTKMQ 354
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ K+T S I+SKGISA ++N+YRG+V V + A ++RNF+QCDS+L+G +CGAHT PYI
Sbjct: 355 HIGKDTKSTIISKGISADVADNSYRGQVKVSKNADNARNFSQCDSMLLGPDCGAHTYPYI 414
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
ES N S +EHEATTSK+ ++ +FYC QRG+ EE A+ LIVNGF +EVLQ+LPMEFAVEA
Sbjct: 415 ESNNPSAQIEHEATTSKVGEDQMFYCHQRGLGEEEALKLIVNGFCQEVLQELPMEFAVEA 474
Query: 477 QKLIDISLEGSVG 489
++L+DI LEGSVG
Sbjct: 475 KELLDIELEGSVG 487
>gi|15923836|ref|NP_371370.1| ABC transporter-associated protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|15926506|ref|NP_374039.1| hypothetical protein SA0778 [Staphylococcus aureus subsp. aureus
N315]
gi|21282528|ref|NP_645616.1| hypothetical protein MW0799 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485693|ref|YP_042914.1| hypothetical protein SAS0788 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651608|ref|YP_185789.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus COL]
gi|87160384|ref|YP_493522.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194609|ref|YP_499405.1| hypothetical protein SAOUHSC_00851 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221001|ref|YP_001331823.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979173|ref|YP_001441432.1| hypothetical protein SAHV_0842 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509116|ref|YP_001574775.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141909|ref|ZP_03566402.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253731455|ref|ZP_04865620.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732729|ref|ZP_04866894.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005634|ref|ZP_05144235.2| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424965|ref|ZP_05601392.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427633|ref|ZP_05604032.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430267|ref|ZP_05606650.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
68-397]
gi|257432965|ref|ZP_05609325.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435869|ref|ZP_05611917.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M876]
gi|257794857|ref|ZP_05643836.1| FeS assembly protein SufB [Staphylococcus aureus A9781]
gi|258418173|ref|ZP_05682438.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258421470|ref|ZP_05684395.1| FeS assembly protein SufB [Staphylococcus aureus A9719]
gi|258423470|ref|ZP_05686361.1| FeS assembly protein SufB [Staphylococcus aureus A9635]
gi|258439188|ref|ZP_05690232.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258440884|ref|ZP_05690719.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445714|ref|ZP_05693891.1| FeS assembly protein SufB [Staphylococcus aureus A6300]
gi|258452130|ref|ZP_05700146.1| FeS assembly protein SufB [Staphylococcus aureus A5948]
gi|258453927|ref|ZP_05701899.1| FeS assembly protein SufB [Staphylococcus aureus A5937]
gi|262049613|ref|ZP_06022481.1| hypothetical protein SAD30_1196 [Staphylococcus aureus D30]
gi|262052918|ref|ZP_06025099.1| hypothetical protein SA930_0130 [Staphylococcus aureus 930918-3]
gi|269202471|ref|YP_003281740.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
ED98]
gi|282894656|ref|ZP_06302883.1| FeS assembly protein SufB [Staphylococcus aureus A8117]
gi|282903454|ref|ZP_06311345.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C160]
gi|282905233|ref|ZP_06313090.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908213|ref|ZP_06316044.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282913689|ref|ZP_06321478.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M899]
gi|282916166|ref|ZP_06323929.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
D139]
gi|282918616|ref|ZP_06326353.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C427]
gi|282922196|ref|ZP_06329891.1| FeS assembly protein SufB [Staphylococcus aureus A9765]
gi|282923605|ref|ZP_06331285.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C101]
gi|282929256|ref|ZP_06336829.1| FeS assembly protein SufB [Staphylococcus aureus A10102]
gi|283957655|ref|ZP_06375108.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023845|ref|ZP_06378243.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus 132]
gi|293500732|ref|ZP_06666583.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
58-424]
gi|293509682|ref|ZP_06668393.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M809]
gi|293524269|ref|ZP_06670956.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M1015]
gi|294850191|ref|ZP_06790927.1| FeS assembly protein SufB [Staphylococcus aureus A9754]
gi|295406550|ref|ZP_06816356.1| FeS assembly protein SufB [Staphylococcus aureus A8819]
gi|296276590|ref|ZP_06859097.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus MR1]
gi|297208448|ref|ZP_06924878.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297245276|ref|ZP_06929150.1| FeS assembly protein SufB [Staphylococcus aureus A8796]
gi|297590241|ref|ZP_06948880.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|300912524|ref|ZP_07129967.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
gi|304381530|ref|ZP_07364180.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|81649695|sp|Q6GB09|Y788_STAAS RecName: Full=UPF0051 protein SAS0788
gi|81694899|sp|Q5HHG8|Y918_STAAC RecName: Full=UPF0051 protein SACOL0918
gi|81704576|sp|Q7A1E0|Y799_STAAW RecName: Full=UPF0051 protein MW0799
gi|81705980|sp|Q7A6L4|Y778_STAAN RecName: Full=UPF0051 protein SA0778
gi|81781893|sp|Q99VF9|Y846_STAAM RecName: Full=UPF0051 protein SAV0846
gi|122539931|sp|Q2FZY3|Y851_STAA8 RecName: Full=UPF0051 protein SAOUHSC_00851
gi|123486666|sp|Q2FIF6|Y822_STAA3 RecName: Full=UPF0051 protein SAUSA300_0822
gi|13700720|dbj|BAB42017.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246615|dbj|BAB57008.1| similar to ABC transporter-associated protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|21203965|dbj|BAB94664.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244136|emb|CAG42562.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285794|gb|AAW37888.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus COL]
gi|87126358|gb|ABD20872.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202167|gb|ABD29977.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373801|dbj|BAF67061.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721308|dbj|BAF77725.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367925|gb|ABX28896.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253724698|gb|EES93427.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729340|gb|EES98069.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272535|gb|EEV04658.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275826|gb|EEV07299.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279044|gb|EEV09655.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
68-397]
gi|257282380|gb|EEV12515.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285060|gb|EEV15179.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M876]
gi|257788829|gb|EEV27169.1| FeS assembly protein SufB [Staphylococcus aureus A9781]
gi|257838966|gb|EEV63445.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842396|gb|EEV66820.1| FeS assembly protein SufB [Staphylococcus aureus A9719]
gi|257846531|gb|EEV70554.1| FeS assembly protein SufB [Staphylococcus aureus A9635]
gi|257847760|gb|EEV71757.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257852398|gb|EEV76319.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855290|gb|EEV78228.1| FeS assembly protein SufB [Staphylococcus aureus A6300]
gi|257860345|gb|EEV83177.1| FeS assembly protein SufB [Staphylococcus aureus A5948]
gi|257863792|gb|EEV86548.1| FeS assembly protein SufB [Staphylococcus aureus A5937]
gi|259159169|gb|EEW44232.1| hypothetical protein SA930_0130 [Staphylococcus aureus 930918-3]
gi|259162255|gb|EEW46829.1| hypothetical protein SAD30_1196 [Staphylococcus aureus D30]
gi|262074761|gb|ACY10734.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
ED98]
gi|269940420|emb|CBI48797.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314473|gb|EFB44863.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C101]
gi|282317750|gb|EFB48122.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C427]
gi|282320114|gb|EFB50461.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
D139]
gi|282322721|gb|EFB53043.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M899]
gi|282327878|gb|EFB58160.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331640|gb|EFB61152.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282589132|gb|EFB94230.1| FeS assembly protein SufB [Staphylococcus aureus A10102]
gi|282593486|gb|EFB98480.1| FeS assembly protein SufB [Staphylococcus aureus A9765]
gi|282596409|gb|EFC01370.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
C160]
gi|282762933|gb|EFC03066.1| FeS assembly protein SufB [Staphylococcus aureus A8117]
gi|283470117|emb|CAQ49328.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
ST398]
gi|283791106|gb|EFC29921.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816525|gb|ADC37012.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus aureus
04-02981]
gi|290921232|gb|EFD98293.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M1015]
gi|291095737|gb|EFE25998.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
58-424]
gi|291467779|gb|EFF10294.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
M809]
gi|294822965|gb|EFG39398.1| FeS assembly protein SufB [Staphylococcus aureus A9754]
gi|294968695|gb|EFG44718.1| FeS assembly protein SufB [Staphylococcus aureus A8819]
gi|296887187|gb|EFH26090.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297177947|gb|EFH37196.1| FeS assembly protein SufB [Staphylococcus aureus A8796]
gi|297576540|gb|EFH95255.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|298694156|gb|ADI97378.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886770|gb|EFK81972.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
gi|302332531|gb|ADL22724.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750745|gb|ADL64922.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339893|gb|EFM05837.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312829314|emb|CBX34156.1| feS assembly protein SufB [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128961|gb|EFT84958.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|315194447|gb|EFU24839.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|315197267|gb|EFU27605.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141266|gb|EFW33113.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143038|gb|EFW34829.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440930|gb|EGA98638.1| FeS assembly protein SufB [Staphylococcus aureus O11]
gi|329313585|gb|AEB87998.1| UPF0051 protein [Staphylococcus aureus subsp. aureus T0131]
gi|329724536|gb|EGG61043.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
21172]
gi|329726252|gb|EGG62722.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
21189]
gi|329733945|gb|EGG70267.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
21193]
Length = 465
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 7 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|49483078|ref|YP_040302.1| hypothetical protein SAR0880 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|81651480|sp|Q6GIH0|Y880_STAAR RecName: Full=UPF0051 protein SAR0880
gi|49241207|emb|CAG39886.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 465
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 7 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYIEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|288554028|ref|YP_003425963.1| FeS assembly protein [Bacillus pseudofirmus OF4]
gi|288545188|gb|ADC49071.1| FeS assembly protein, SufB family [Bacillus pseudofirmus OF4]
Length = 465
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 289/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +YKYGF ++ + ++ +GL +I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGEYKYGFSDRDVSIFRSKRGLTREIVEEISRMKKEPQWMLDFRLKSLEQFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDEITYYVKPSEKSE-KSWDEVPEEIKNTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L + G++F A+ EH ++ K++ T++P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLTELGILFTDTDTALREHEEIFKEHFGTIIPPSDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADE S V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKTDTPLQAYFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW P I+N VTKR + + W
Sbjct: 238 TNSLHSAVVEIIVKKNAYCRYTTIQNWAP-------NIFNLVTKRAVADA-GATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ ++RGE + G SIAI+ Q D+G K+ HLA N +S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVMRGEGAKGTILSIAIAGKGQHQDAGAKVHHLAPNCSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG R + S++ +CD+L++ N + TIPY E N++ LEHEAT SK
Sbjct: 350 HGGKVTYRGICHFGRRSEGSKSKIECDTLIMDNESTSDTIPYNEILNNNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGISEQEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|309811794|ref|ZP_07705568.1| FeS assembly protein SufB [Dermacoccus sp. Ellin185]
gi|308434215|gb|EFP58073.1| FeS assembly protein SufB [Dermacoccus sp. Ellin185]
Length = 472
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 200/487 (41%), Positives = 296/487 (60%), Gaps = 19/487 (3%)
Query: 6 ETVDKVRK--IDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
T++++ D+ +Y+YG+ +T+ A +GLN DI+ IS +KNEP+WM + R+ +
Sbjct: 2 STIEELNPGLADLGRYEYGWADTDTAGASAKRGLNPDIVADISDRKNEPEWMKKLRMKSL 61
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ P+W IDF ++ Y+ + D++ ++ TY+KLGIP E+
Sbjct: 62 GLFEKKPMPNWGS-DLTGIDFQNIKYFVKSTEKQA-TTWDELPEDIKNTYDKLGIPEAEK 119
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ L V A ++S V +E+L++ GVIF+ + EH +L ++Y TV+P
Sbjct: 120 QRLI------AGVAAQYESEVVYHQIREDLEEKGVIFVDTDTGLREHEELFREYFGTVIP 173
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADEGSYV
Sbjct: 174 AGDNKFAALNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVH 233
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + LH+AVVE+V NA ++Y+T+QNW +YN VTKR C
Sbjct: 234 YVEGCTAPIYKTDSLHSAVVEIVVKKNARVRYTTIQNW-------SNNVYNLVTKRATC- 285
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A NT
Sbjct: 286 EEGATMEWIDGNIGSKVTMKYPAVFLMGEHARGETLSIAFAGEGQHQDAGAKMVHAAPNT 345
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK ++ G +YRG V V GA HS++ CD+LL+ + T PY++ +
Sbjct: 346 SSTIVSKSVARGGGRTSYRGLVQVLEGAEHSKSSVVCDALLVDQISRSDTYPYVDVREDD 405
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+ HEAT SK+S++ LFY RG+ EE A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 406 VQMGHEATVSKVSEDQLFYLRSRGLSEEEAMAMIVRGFVEPIARELPMEYALELNRLIEL 465
Query: 483 SLEGSVG 489
+EG+VG
Sbjct: 466 QMEGAVG 472
>gi|229147527|ref|ZP_04275874.1| hypothetical protein bcere0012_46560 [Bacillus cereus BDRD-ST24]
gi|228635953|gb|EEK92436.1| hypothetical protein bcere0012_46560 [Bacillus cereus BDRD-ST24]
Length = 465
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISCMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG 465
>gi|163840979|ref|YP_001625384.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
gi|162954455|gb|ABY23970.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
Length = 493
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 292/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y +G+ + D A +GL+E+++R IS+KKNEP WML+ RL + + P+W
Sbjct: 35 IGNYAFGWSDKNEVSDNARRGLSEEVVRDISSKKNEPQWMLDLRLKGLKYFDRKPMPNWG 94
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +++ ++ TYE+LGIP E+ L
Sbjct: 95 -ADLSGIDFDNIKYFVRSTEKQAGS-WEELPDDIRNTYERLGIPKAERNRLV------SG 146
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ A+ EHP++ ++Y T++PVGDN +A+LN+A
Sbjct: 147 VAAQYESEVVYHQIREDLEQQGVIFLDTDTALKEHPEIFQEYFGTIIPVGDNKFASLNTA 206
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 207 VWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYIEGCTAPIYTS 266
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE+V NA ++Y+T+QNW +YN VTKR + + W
Sbjct: 267 DSLHSAVVEIVVKKNARVRYTTIQNW-------SNNVYNLVTKRAIAH-EGATMEWIDGN 318
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A NT S I+SK ++ G
Sbjct: 319 IGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKMVHIAPNTKSSIISKSVARG 378
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + GA HS N +CD+LL+ + T PY++ + ++ HEAT S++
Sbjct: 379 GGRAAYRGLVQIREGAEHSANTVRCDALLVDTISRSDTYPYVDIREDDVSMGHEATVSRV 438
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EGSVG
Sbjct: 439 SEEQLFYLMSRGMREDEAMAMIVRGFIEPIARELPMEYALELNRLIELQMEGSVG 493
>gi|156934263|ref|YP_001438179.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii ATCC BAA-894]
gi|156532517|gb|ABU77343.1| hypothetical protein ESA_02093 [Cronobacter sakazakii ATCC BAA-894]
Length = 496
Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats.
Identities = 287/505 (56%), Positives = 369/505 (73%), Gaps = 25/505 (4%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E D V YK GF T +Q D+ G++E+++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSRNSEATDDVNTWSGPLNYKEGFFTRLQTDELAHGISEEVVRAISAKRNEPEWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS---------------IVGPQSLDDV 104
AYR WL M++P W Y +++ D YY+AP G + +
Sbjct: 61 SAYRAWLEMEEPHWLHAHYDKLNYQDYSYYSAPSCGHCDDACASQPGAVQQPGGNNNSYL 120
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
E+ + +LG+P+RE +VAVDA+FDSVSV TT++++L + G+IF E
Sbjct: 121 TQEVEEAFNQLGVPVRE--------GREVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGE 172
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI +HP+LVKKY+ TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN +
Sbjct: 173 AIHDHPELVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEK 232
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 233 TGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGD 292
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEFYS+A+++
Sbjct: 293 NN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSIGEFYSVALTS 351
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LI
Sbjct: 352 GHQQADTGTKMIHIGKNTKSTIISKGISAGKSQNSYRGLVKIMPTATNARNFTQCDSMLI 411
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G +CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 GPDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDV 471
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 FSELPLEFAVEAQKLLAISLEHSVG 496
>gi|145595601|ref|YP_001159898.1| FeS assembly protein SufB [Salinispora tropica CNB-440]
gi|145304938|gb|ABP55520.1| Iron-regulated ABC transporter membrane component SufB [Salinispora
tropica CNB-440]
Length = 476
Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats.
Identities = 193/475 (40%), Positives = 290/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y+YG+ + A +GLNE ++R ISAKK EP WML+ R R + P+W
Sbjct: 18 LGRYEYGWADPDAAGAVAQRGLNEAVVRDISAKKAEPAWMLDLRRKGLRLFDRKPMPAWG 77
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +++ ++ TY+KLGIP E++ L
Sbjct: 78 -ADLTGIDFDNIKYFVRSTEKQATS-WEELPEDIKNTYDKLGIPEAEKQRLV------AG 129
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +++L++ GV+F+ A+ EH DL K+Y TV+PVGDN +AALN+A
Sbjct: 130 VAAQYESEVVYHKIRDDLEEQGVVFLDTDTALKEHEDLFKEYFGTVIPVGDNKFAALNTA 189
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 190 VWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYSS 249
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 250 DSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRAVCH-EGATMEWIDGN 301
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A++ Q D+G KM+H A T+S IVSK I+ G
Sbjct: 302 IGSKVTMKYPAVFMTGEHAKGEVLSVAMAGEGQHQDAGAKMVHAAPRTSSTIVSKSIARG 361
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V G+ S++ +CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 362 GGRTSYRGLVQVLEGSHSSKSTVKCDALLVDTISRSDTYPYVDIREDDVSMGHEATVSKV 421
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 422 SEDQLFYLMSRGLSEDEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 476
>gi|296102715|ref|YP_003612861.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057174|gb|ADF61912.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 496
Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats.
Identities = 290/505 (57%), Positives = 370/505 (73%), Gaps = 25/505 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E +V YK GF T +Q D+ KG+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATSEVNTWSGGHLNYKEGFFTQLQTDELAKGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LSAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGSCDDTCASQPGAVQQTGADNSFL 120
Query: 106 -PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
E+ + +LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF E
Sbjct: 121 SKEVEEAFNQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGE 172
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI +HP+LVKKY+ TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN +
Sbjct: 173 AIHDHPELVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEK 232
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 233 TGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGD 292
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++
Sbjct: 293 GN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTS 351
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LI
Sbjct: 352 GHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLI 411
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G +CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 GADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDV 471
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 FSELPLEFAVEAQKLLAISLEHSVG 496
>gi|200389777|ref|ZP_03216388.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602222|gb|EDZ00768.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 495
Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + KVAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------KVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|284031207|ref|YP_003381138.1| FeS assembly protein SufB [Kribbella flavida DSM 17836]
gi|283810500|gb|ADB32339.1| FeS assembly protein SufB [Kribbella flavida DSM 17836]
Length = 470
Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats.
Identities = 191/475 (40%), Positives = 291/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ +++ A +GL+ D++R IS KNEP+WML+ R+ + + PSW
Sbjct: 12 LGNYQYGWADSDTAGAVAKRGLSADVVRGISTLKNEPEWMLDLRMKGLKLFDRKPMPSWG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ D++ ++ TY+KLGIP E++ L
Sbjct: 72 -ADLSGIDFDNIKYFVRSTEKQATS-WDELPEDIKNTYDKLGIPEAEKQRLV------AG 123
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ + E+P+L ++Y +V+PVGDN +AALN+A
Sbjct: 124 VAAQYESEVVYHQIREDLEQQGVIFVDTDTGLKEYPELFQEYFGSVIPVGDNKFAALNTA 183
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 184 VWSGGSFIYVPKGVKVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKS 243
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ A +Y+T+QNW +YN VTKR C + + W
Sbjct: 244 DSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRATC-EEGATMEWIDGN 295
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A + Q D+G+KM+H A T+S IVSK ++ G
Sbjct: 296 IGSKVTMKYPAVYLMGEHAKGETLSVAFAGEGQHQDAGSKMVHNAPYTSSSIVSKSVARG 355
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V GA HS++ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 356 GGRTSYRGLVEVAPGAHHSKSTVRCDALLVDTISRSDTYPYVDVREDDVAMGHEATVSKV 415
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 416 SDDQLFYLMSRGMAEDEAMAMIVRGFIEPIARELPMEYALELNRLIELQMEGAVG 470
>gi|326627983|gb|EGE34326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 508
Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 74 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 134 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 185
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 186 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 245
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 246 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 305
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 306 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 364
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 365 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 424
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 425 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 484
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 485 SELPLEFAVEAQKLLTISLEHSVG 508
>gi|296394725|ref|YP_003659609.1| FeS assembly protein SufB [Segniliparus rotundus DSM 44985]
gi|296181872|gb|ADG98778.1| FeS assembly protein SufB [Segniliparus rotundus DSM 44985]
Length = 480
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 191/475 (40%), Positives = 290/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ + A +G++E+++ ISAKK EP+WML+ RL A + P+W
Sbjct: 22 LGNYGYGWSDADTAGASARRGISEEVVADISAKKGEPEWMLQARLKALSIFNRKPMPAWG 81
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY+KLGIP E+ L
Sbjct: 82 G-DLSGIDFDNIKYFVRSTEKQAAT-WDDLPEDIKNTYDKLGIPEAEKNRLV------AG 133
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GV+F+ A+ EHPD+ +++ TV+P GDN ++ALN+A
Sbjct: 134 VAAQYESEVVYHQIREDLEQQGVVFLDTDTALKEHPDVFREHFGTVIPAGDNKFSALNTA 193
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GS++Y+PKGV+ + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 194 VWSGGSYIYVPKGVQVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKS 253
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 254 DSLHSAVVEIIVKPGGRCRYTTIQNW-------SNNVYNLVTKRARAEA-GATMEWIDGN 305
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A + Q D+G+KMLHLA T+S IVSK ++ G
Sbjct: 306 IGSKVTMKYPAVWLTGEHAKGEVLSLAFAGPGQHQDTGSKMLHLAPKTSSNIVSKSVARG 365
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
++YRG V VH+GAA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 366 GGRSSYRGLVGVHKGAAGSRSTVRCDALLVDEISRSDTYPYVDVREDDVTMGHEATVSKV 425
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY + RG+ E+ A+A++V GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 426 SEEQLFYLMSRGLTEDEAMAMVVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 480
>gi|188533955|ref|YP_001907752.1| cysteine desulfurase activator complex subunit SufB [Erwinia
tasmaniensis Et1/99]
gi|188028997|emb|CAO96865.1| SufB protein [Erwinia tasmaniensis Et1/99]
Length = 496
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 289/505 (57%), Positives = 368/505 (72%), Gaps = 25/505 (4%)
Query: 1 MVAVRETVDKVR--KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + D V+ + +YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTDASDDVQVWEGGHQKYKEGFFTQLQTEEFEHGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL--------------DDV 104
L A+ WL M++P W + Y +D+ D YY+AP S D +
Sbjct: 61 LKAFAAWLEMEEPHWLKADYKKLDYQDYSYYSAPSCGSCDDSCASEPGAKQASGSAPDYL 120
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
E+ +++LG+P+RE +VAVDA+FDSVSV TT++++L K G+IF E
Sbjct: 121 TQEVEEAFKQLGVPVRE--------GQEVAVDAIFDSVSVSTTYRDKLAKEGIIFCSFGE 172
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI EHP+LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 AIHEHPELVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAK 232
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 233 TGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQNWFSGG 292
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A+++
Sbjct: 293 DSE-GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSIGEFFSVALTS 351
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+LI
Sbjct: 352 GRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSMLI 411
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G CGAHT PY+E +N++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V
Sbjct: 412 GAECGAHTFPYVEVRNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDV 471
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 FSELPLEFAVEAQKLLAISLEHSVG 496
>gi|319891830|ref|YP_004148705.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
pseudintermedius HKU10-03]
gi|317161526|gb|ADV05069.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
pseudintermedius HKU10-03]
gi|323465014|gb|ADX77167.1| FeS assembly protein SufB [Staphylococcus pseudintermedius ED99]
Length = 465
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 294/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+R IS K+EP+WML++RL + +++ M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVREISRMKSEPEWMLDFRLKSLKQFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSERSE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L K+Y ++V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDTALKENEELFKEYFASVIPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TNSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPACVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 DGGKVVYRGIVHFGRKAKGARSNIECDTLILDNQSTSDTIPYNEIFNDHISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|118617467|ref|YP_905799.1| hypothetical protein MUL_1862 [Mycobacterium ulcerans Agy99]
gi|118569577|gb|ABL04328.1| conserved protein [Mycobacterium ulcerans Agy99]
Length = 481
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 199/497 (40%), Positives = 295/497 (59%), Gaps = 24/497 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ-------YKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPD 52
M E + D+ Y YG+ + A +GL+E ++R ISAKKNEP+
Sbjct: 1 MTLTPEAKTAAEPLTQDEAIASLGNYGYGWSDSDAAGAAAQRGLSEAVVRDISAKKNEPE 60
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
WML+ RL A R + P+W IDFD++ Y+ DD+ ++ TY
Sbjct: 61 WMLQTRLKALRIFERKPMPNWGS-NLAGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTY 118
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++LGIP E++ L V A ++S V +E+L+ GVIF+ + EHP++
Sbjct: 119 DRLGIPEAEKQRLV------AGVAAQYESEVVYHQIREDLEAQGVIFLDTDTGLREHPEI 172
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
K+Y TV+P GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTL
Sbjct: 173 FKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTL 232
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
IIADEGSYV Y+EGCTAP + LH+AVVE++ +A ++Y+T+QNW +Y
Sbjct: 233 IIADEGSYVHYVEGCTAPIYKSDSLHSAVVEIIVKPHAWVRYTTIQNW-------SNNVY 285
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N VTKR + + W GS +T KYP+ + GE + GE S+A + Q D+G
Sbjct: 286 NLVTKRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTG 344
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
K+LHLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ + T
Sbjct: 345 AKILHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDT 404
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPME+
Sbjct: 405 YPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEY 464
Query: 473 AVEAQKLIDISLEGSVG 489
A+E +LI++ +EG+VG
Sbjct: 465 ALELNRLIELQMEGAVG 481
>gi|269104614|ref|ZP_06157310.1| iron-sulfur cluster assembly protein SufB [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161254|gb|EEZ39751.1| iron-sulfur cluster assembly protein SufB [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 492
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 279/491 (56%), Positives = 364/491 (74%), Gaps = 5/491 (1%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
++ +D V ++ +YK GF T++ D KG+NE++IR ISAK+NEPDWMLE+RL A
Sbjct: 4 PELQPDIDHV--LNHKRYKEGFYTDVVSDTFSKGINEEVIRAISAKRNEPDWMLEFRLNA 61
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ WLTMK+P W + YP +D+ D YY+AP + E L + E
Sbjct: 62 FNYWLTMKEPHWLKAEYPKLDYQDYSYYSAPSCARCDNIDSSNTDQESANSEFLTQEVEE 121
Query: 122 QEILAGV---QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
L GV + + +AVDA+FDSVSV TT+ EELK+ G+IF SEAI ++P+LVKKYL
Sbjct: 122 AFELLGVPVREGADIAVDAIFDSVSVATTYHEELKQLGIIFCSFSEAIQQYPELVKKYLG 181
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
TVVP DNF+AALN+AV +DG+F+YIP GVRCP ELSTYFRIN+ TGQFERT+++AD+G
Sbjct: 182 TVVPAKDNFFAALNAAVASDGTFIYIPPGVRCPRELSTYFRINQAKTGQFERTILVADKG 241
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+YVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G+ GGI NFVTKR
Sbjct: 242 AYVSYIEGCSAPVRDSYQLHAAVVEVIIHQDAEVKYSTVQNWFAGEEGQDGGILNFVTKR 301
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG Q+ D+GTKM+H+
Sbjct: 302 ALCEGRNSKMSWTQSETGSAITWKYPSVILQGDNSVGEFFSVALTNGNQKADTGTKMIHI 361
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT S I+SKGISAG S N+YRG V + A +RN+TQCDS+LIGN CGAHT P ++
Sbjct: 362 GKNTKSTIISKGISAGQSENSYRGLVKILPSAQGARNYTQCDSMLIGNKCGAHTFPTVDV 421
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+N S +EHEATTS+I ++ LFYC+QRGI E+ AI++IVNGF ++V +LP+EFAV+AQK
Sbjct: 422 RNPSAQIEHEATTSRIGEDQLFYCVQRGISEDDAISMIVNGFCKDVFSELPLEFAVDAQK 481
Query: 479 LIDISLEGSVG 489
L+ ISLE SVG
Sbjct: 482 LLSISLEHSVG 492
>gi|261339557|ref|ZP_05967415.1| FeS assembly protein SufB [Enterobacter cancerogenus ATCC 35316]
gi|288318374|gb|EFC57312.1| FeS assembly protein SufB [Enterobacter cancerogenus ATCC 35316]
Length = 496
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 288/505 (57%), Positives = 369/505 (73%), Gaps = 25/505 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E V YK GF T +Q D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATSDVNTWSGGHLNYKEGFFTQLQTDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A+R WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LSAFRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGSCDDTCASQPGAVQQTGTDNSFL 120
Query: 106 -PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
E+ + +LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF E
Sbjct: 121 SKEVEDAFNQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLGEQGIIFCSFGE 172
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI +HP+LVKKY+ TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN +
Sbjct: 173 AIHDHPELVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEK 232
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 233 TGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGD 292
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++
Sbjct: 293 GN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTS 351
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LI
Sbjct: 352 GHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLI 411
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G +CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 GADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDV 471
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 FSELPLEFAVEAQKLLAISLEHSVG 496
>gi|283833346|ref|ZP_06353087.1| FeS assembly protein SufB [Citrobacter youngae ATCC 29220]
gi|291070987|gb|EFE09096.1| FeS assembly protein SufB [Citrobacter youngae ATCC 29220]
Length = 495
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 287/504 (56%), Positives = 370/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V YK GF T ++ D+ KG+NE+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATDDVNTWAGGHLNYKEGFFTQLKTDELAKGINEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A+ WL M++P W + Y +++ D YY+AP ++
Sbjct: 61 LNAFNAWLAMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ + +LG+P+RE + +VAVDA+FDSVSV TT++++L + G+IF EA
Sbjct: 121 KEVEDAFAQLGVPVREGK--------EVAVDAIFDSVSVATTYRDKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LVK+YL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVKQYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 233 GQFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDG 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPAATNARNYTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|311742557|ref|ZP_07716366.1| FeS assembly protein SufB [Aeromicrobium marinum DSM 15272]
gi|311314185|gb|EFQ84093.1| FeS assembly protein SufB [Aeromicrobium marinum DSM 15272]
Length = 484
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 195/476 (40%), Positives = 290/476 (60%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV +Y++G+ +GL+ED++R IS K+EP+WML+ RL + + P+W
Sbjct: 25 DVGRYEFGWSDKTDAGATVQRGLSEDVVRNISGLKSEPEWMLQQRLKGLKLFGRKPMPTW 84
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD++ Y+ DD+ ++ TY++LGIP E++ L
Sbjct: 85 GS-DLGGIDFDNIKYFVRSTEKQAAT-WDDLPEDIKNTYDRLGIPEAEKQRLV------S 136
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +E+L+ GV+F+ A+ EHP++ ++Y TV+PVGDN ++ALN+
Sbjct: 137 GVAAQYESEVVYHSIREDLEAQGVLFLDTDTALREHPEIFQEYFGTVIPVGDNKFSALNT 196
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADE SYV Y+EGCTAP
Sbjct: 197 AVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEDSYVHYVEGCTAPIYS 256
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE+V A ++Y+T+QNW +YN VTKR C + + W
Sbjct: 257 SDSLHSAVVEIVVKKGARVRYTTIQNW-------SNNVYNLVTKRAVCEA-GATMEWVDG 308
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ L GE + GE SIA + Q D+G KM+H A NT+S I+SK ++
Sbjct: 309 NIGSKVTMKYPAVYLMGEGARGETLSIAFAGEGQHQDAGAKMVHAAPNTSSSILSKSVAR 368
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G +YRG + V GA S + +CD+LL+ + T PY++ + L HEAT SK
Sbjct: 369 GGGRTSYRGLLQVLEGAHGSASTVKCDALLVDQVSRSDTYPYVDVREDDVTLGHEATVSK 428
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+SD+ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 429 VSDDQLFYFMSRGMGEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 484
>gi|168263803|ref|ZP_02685776.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205347579|gb|EDZ34210.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 495
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVLQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|22125827|ref|NP_669250.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis KIM 10]
gi|45441981|ref|NP_993520.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis biovar Microtus str. 91001]
gi|108807743|ref|YP_651659.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Antiqua]
gi|108812020|ref|YP_647787.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Nepal516]
gi|145598048|ref|YP_001162124.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Pestoides F]
gi|149365687|ref|ZP_01887722.1| hypothetical protein YPE_0857 [Yersinia pestis CA88-4125]
gi|162418761|ref|YP_001607002.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Angola]
gi|165927462|ref|ZP_02223294.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939488|ref|ZP_02228034.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011840|ref|ZP_02232738.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211082|ref|ZP_02237117.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400727|ref|ZP_02306233.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422168|ref|ZP_02313921.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424912|ref|ZP_02316665.1| FeS assembly protein SufB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218929493|ref|YP_002347368.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis CO92]
gi|229837928|ref|ZP_04458087.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895088|ref|ZP_04510264.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|229898489|ref|ZP_04513634.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902332|ref|ZP_04517452.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|270490488|ref|ZP_06207562.1| FeS assembly protein SufB [Yersinia pestis KIM D27]
gi|21958756|gb|AAM85501.1|AE013796_4 hypothetical protein y1935 [Yersinia pestis KIM 10]
gi|45436844|gb|AAS62397.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Yersinia pestis biovar
Microtus str. 91001]
gi|108775668|gb|ABG18187.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Nepal516]
gi|108779656|gb|ABG13714.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Antiqua]
gi|115348104|emb|CAL21031.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209744|gb|ABP39151.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Pestoides F]
gi|149292100|gb|EDM42174.1| hypothetical protein YPE_0857 [Yersinia pestis CA88-4125]
gi|162351576|gb|ABX85524.1| FeS assembly protein SufB [Yersinia pestis Angola]
gi|165912537|gb|EDR31168.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920517|gb|EDR37794.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989305|gb|EDR41606.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208262|gb|EDR52742.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958980|gb|EDR56001.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049580|gb|EDR60988.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056099|gb|EDR65877.1| FeS assembly protein SufB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680667|gb|EEO76763.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|229688037|gb|EEO80108.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694294|gb|EEO84341.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701850|gb|EEO89873.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|262361635|gb|ACY58356.1| hypothetical protein YPD4_1448 [Yersinia pestis D106004]
gi|262365623|gb|ACY62180.1| hypothetical protein YPD8_1497 [Yersinia pestis D182038]
gi|270338992|gb|EFA49769.1| FeS assembly protein SufB [Yersinia pestis KIM D27]
gi|320015058|gb|ADV98629.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 503
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 286/497 (57%), Positives = 365/497 (73%), Gaps = 30/497 (6%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T++ D+ KG+NE+++R ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSDGRYKEGFFTHLATDELAKGINEEVVRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD---------------------PELLRTY 112
+ Y +D+ D YY+AP + D E+ +
Sbjct: 76 LKAHYQGLDYQDYSYYSAPSCGSCDDNCDSQPGAVQQSSADGSAPSNANEYLTAEVESAF 135
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+LGIP+RE ++VAVDA+FDSVSV TT++E+L G++F EAI E+PDL
Sbjct: 136 AQLGIPVRE--------GAEVAVDAIFDSVSVATTYREKLAGQGILFCSFGEAIQEYPDL 187
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
V+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT+
Sbjct: 188 VQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTI 247
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+IADEGSYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI
Sbjct: 248 LIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGS-DSTGGIL 306
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG+QQ D+G
Sbjct: 307 NFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSVGEFFSVALTNGYQQADTG 366
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
TKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT
Sbjct: 367 TKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPDSGAHT 426
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EF
Sbjct: 427 FPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 486
Query: 473 AVEAQKLIDISLEGSVG 489
AVEAQKL+ ISLE SVG
Sbjct: 487 AVEAQKLLAISLEHSVG 503
>gi|255327508|ref|ZP_05368575.1| FeS assembly protein SufB [Rothia mucilaginosa ATCC 25296]
gi|255295402|gb|EET74752.1| FeS assembly protein SufB [Rothia mucilaginosa ATCC 25296]
Length = 485
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 200/490 (40%), Positives = 302/490 (61%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ E ++ +++ + Y+YG+ +++ A +GL+ED++R ISAKKNEP WML+ RL
Sbjct: 12 TVISEILEMNPELEGIGNYEYGWADSDAAGQVAKRGLDEDVVRDISAKKNEPQWMLDMRL 71
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + + P+W IDFD++ Y+ +++ ++ TYE+LGIP
Sbjct: 72 KALKFFERKPMPTWG-ADLSEIDFDNIKYFVRSTEGQAAS-WEELPEDIRTTYERLGIPE 129
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L V A ++S V +E+L+K GVIF+ + E+P+L K+Y +
Sbjct: 130 AERNSLV------AGVAAQYESEVVYHQIREDLEKQGVIFVDTDTGLREYPELFKEYFGS 183
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++P+GDN ++ALN+AV++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGS
Sbjct: 184 IIPIGDNKFSALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGS 243
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V NA ++Y+T+QNW +YN VTKR
Sbjct: 244 YVHYIEGCTAPIYKSDSLHSAVVEIVLKKNARVRYTTIQNW-------SNNVYNLVTKRA 296
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ + GE + GE SIA + Q D+G+KM+H+A
Sbjct: 297 VAH-EGATMEWVDGNIGSKVTQKYPAVYMVGEHAKGETLSIAFAGEGQHQDTGSKMVHIA 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ + YRG V V GA HS++ CD+LL+ + T PY++ +
Sbjct: 356 PNTSSTIVSKSVARNGGRSAYRGLVQVREGAKHSKSSVVCDALLVDTISRSDTYPYVDVR 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT S++S++ LFY +QRG+ EE A+A+IV GFV + ++LPME+A+E +L
Sbjct: 416 EDDVTMGHEATVSRVSEDQLFYLMQRGLSEEEAMAMIVRGFVEPIARELPMEYALELNRL 475
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 476 IELQMEGSVG 485
>gi|295427401|ref|ZP_06820036.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|295128789|gb|EFG58420.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus
EMRSA16]
Length = 468
Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 10 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 69
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 70 GG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 121
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 122 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 180
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 181 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYIEGCTAPVYT 240
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 241 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 292
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 293 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 352
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 353 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 412
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 413 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 468
>gi|295096075|emb|CBK85165.1| Iron-regulated ABC transporter membrane component SufB
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 496
Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats.
Identities = 288/505 (57%), Positives = 369/505 (73%), Gaps = 25/505 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E V YK GF T +Q D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATSDVNTWSGGHLNYKEGFFTQLQTDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A+R WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LSAFRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGSCDDTCASQPGAVQQTGAENSFL 120
Query: 106 -PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
E+ + +LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF E
Sbjct: 121 SKEVEEAFNQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGE 172
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
AI +HP+LVKKY+ TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN +
Sbjct: 173 AIHDHPELVKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEK 232
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
TGQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD
Sbjct: 233 TGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGD 292
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++
Sbjct: 293 GN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTS 351
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LI
Sbjct: 352 GHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLI 411
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G +CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 GADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDV 471
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 FSELPLEFAVEAQKLLAISLEHSVG 496
>gi|299536325|ref|ZP_07049638.1| ABC transporter subunit [Lysinibacillus fusiformis ZC1]
gi|298728311|gb|EFI68873.1| ABC transporter subunit [Lysinibacillus fusiformis ZC1]
Length = 465
Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 287/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF ++ + ++ +GL +I+R IS K EP+WMLE+RL A + T P W
Sbjct: 7 DIGDYKYGFHDKDVSIFRSKRGLTVEIVREISNMKQEPEWMLEYRLKALETFYTKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLGDLDFDEITYYVKPSEATQ-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K++L+ G++F A+ E+ D+ K+Y V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKKDLEDLGIVFKDTDSALRENEDIFKQYWGKVIPYTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P GV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPPGVKVETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR + W
Sbjct: 238 TNSLHSAVVEIIVRKDAYCRYTTIQNWA-------NNVYNLVTKRTVV-EENGTMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L+GE + G SIA++ Q +G KM+H+A NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPACILKGEGARGMTLSIALAGKGQHQHAGAKMIHMAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TY G+V A+ +R +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYMGQVRFGPKASGARANIECDTLIMDNQSTSDTIPYNEILNDNVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|167551665|ref|ZP_02345419.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|204927455|ref|ZP_03218656.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204322797|gb|EDZ07993.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323571|gb|EDZ11410.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 495
Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|16764720|ref|NP_460335.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994391|ref|ZP_02575483.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233560|ref|ZP_02658618.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168239251|ref|ZP_02664309.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168463223|ref|ZP_02697154.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168822236|ref|ZP_02834236.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194468610|ref|ZP_03074594.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735936|ref|YP_002114385.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197251302|ref|YP_002146669.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197265043|ref|ZP_03165117.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|238910814|ref|ZP_04654651.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|16419890|gb|AAL20294.1| putative ABC transporter [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194454974|gb|EDX43813.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711438|gb|ACF90659.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633995|gb|EDX52347.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197215005|gb|ACH52402.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243298|gb|EDY25918.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197287987|gb|EDY27374.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205327762|gb|EDZ14526.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332392|gb|EDZ19156.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205341364|gb|EDZ28128.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|267993257|gb|ACY88142.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157905|emb|CBW17400.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912355|dbj|BAJ36329.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320086149|emb|CBY95923.1| UPF0051 protein slr0074 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321223996|gb|EFX49059.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322616754|gb|EFY13663.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619986|gb|EFY16859.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622297|gb|EFY19142.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322627820|gb|EFY24610.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633081|gb|EFY29824.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636673|gb|EFY33376.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641302|gb|EFY37943.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644930|gb|EFY41463.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650231|gb|EFY46645.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322655806|gb|EFY52108.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660132|gb|EFY56371.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665302|gb|EFY61490.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669559|gb|EFY65707.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673485|gb|EFY69587.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677413|gb|EFY73477.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679924|gb|EFY75963.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687396|gb|EFY83368.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323129640|gb|ADX17070.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323192349|gb|EFZ77580.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198632|gb|EFZ83733.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203113|gb|EFZ88144.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323208678|gb|EFZ93616.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323213807|gb|EFZ98585.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217655|gb|EGA02370.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323229457|gb|EGA13580.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232680|gb|EGA16776.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240282|gb|EGA24326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242730|gb|EGA26751.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323245941|gb|EGA29929.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252815|gb|EGA36652.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323260086|gb|EGA43711.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267149|gb|EGA50634.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323271527|gb|EGA54948.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332988257|gb|AEF07240.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 495
Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|229543313|ref|ZP_04432373.1| FeS assembly protein SufB [Bacillus coagulans 36D1]
gi|229327733|gb|EEN93408.1| FeS assembly protein SufB [Bacillus coagulans 36D1]
Length = 465
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 208/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ + +A +GL ++I+ IS K EP WML++RL + + P W
Sbjct: 7 EIGDYKYGFHDKDVSIFRAKRGLTKEIVEEISKMKEEPQWMLDFRLKSLEHFYNKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
A++FDD+ YY P G +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSALNFDDITYYVKPTEHAG-RSWDEVPQEIKNTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K++L+K G++F A+ E+ D+ +KY +TV+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKQDLEKLGIVFKDTDSALKENEDIFRKYWATVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P GV+ L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPPGVKVDTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKNAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYPS LL+GE + G SIAI+ Q D+G KM HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPSVLLKGEGARGMTLSIAIAGKGQHQDAGAKMYHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ + + T+PY E N++ +LEHEA SK
Sbjct: 350 HGGKVTYRGMVHFGRKADGARSNVECDTLIMDHLSTSDTVPYNEILNNNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|161614216|ref|YP_001588181.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|161363580|gb|ABX67348.1| hypothetical protein SPAB_01959 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 495
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLGMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|51596637|ref|YP_070828.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis IP 32953]
gi|170024087|ref|YP_001720592.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis YPIII]
gi|186895693|ref|YP_001872805.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis PB1/+]
gi|51589919|emb|CAH21551.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|169750621|gb|ACA68139.1| FeS assembly protein SufB [Yersinia pseudotuberculosis YPIII]
gi|186698719|gb|ACC89348.1| FeS assembly protein SufB [Yersinia pseudotuberculosis PB1/+]
Length = 503
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 287/497 (57%), Positives = 365/497 (73%), Gaps = 30/497 (6%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T++ D+ KG+NE+++R ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSDGRYKEGFFTHLATDELAKGINEEVVRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD---------------------PELLRTY 112
+ Y +D+ D YY+AP + D E+ +
Sbjct: 76 LKAHYQGLDYQDYSYYSAPSCGRCDDNCDSQPGAVQQSSADGSAPSNANEYLTAEVESAF 135
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+LGIP+RE ++VAVDA+FDSVSV TT++E+L G+IF EAI E+PDL
Sbjct: 136 AQLGIPVRE--------GAEVAVDAIFDSVSVATTYREKLAGQGIIFCSFGEAIQEYPDL 187
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
V+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT+
Sbjct: 188 VQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTI 247
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+IADEGSYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI
Sbjct: 248 LIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGS-DSTGGIL 306
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG+QQ D+G
Sbjct: 307 NFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSVGEFFSVALTNGYQQADTG 366
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
TKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT
Sbjct: 367 TKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPDSGAHT 426
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EF
Sbjct: 427 FPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 486
Query: 473 AVEAQKLIDISLEGSVG 489
AVEAQKL+ ISLE SVG
Sbjct: 487 AVEAQKLLAISLEHSVG 503
>gi|153949039|ref|YP_001400717.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis IP 31758]
gi|152960534|gb|ABS47995.1| FeS assembly protein SufB [Yersinia pseudotuberculosis IP 31758]
Length = 503
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 287/497 (57%), Positives = 365/497 (73%), Gaps = 30/497 (6%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T++ D+ KG+NE+++R ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSDGRYKEGFFTHLATDELAKGINEEVVRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD---------------------PELLRTY 112
+ Y +D+ D YY+AP + D E+ +
Sbjct: 76 LKAHYQGLDYQDYSYYSAPSCGSCDDNCDSQPGAVQQSSADGSAPSNANEYLTAEVESAF 135
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+LGIP+RE ++VAVDA+FDSVSV TT++E+L G+IF EAI E+PDL
Sbjct: 136 AQLGIPVRE--------GAEVAVDAIFDSVSVATTYREKLAGQGIIFCSFGEAIQEYPDL 187
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
V+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT+
Sbjct: 188 VQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTI 247
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+IADEGSYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI
Sbjct: 248 LIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGS-DSTGGIL 306
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG+QQ D+G
Sbjct: 307 NFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSVGEFFSVALTNGYQQADTG 366
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
TKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT
Sbjct: 367 TKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPDSGAHT 426
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EF
Sbjct: 427 FPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEF 486
Query: 473 AVEAQKLIDISLEGSVG 489
AVEAQKL+ ISLE SVG
Sbjct: 487 AVEAQKLLAISLEHSVG 503
>gi|289167762|ref|YP_003446031.1| hypothetical protein smi_0919 [Streptococcus mitis B6]
gi|307706419|ref|ZP_07643229.1| feS assembly protein SufB [Streptococcus mitis SK321]
gi|288907329|emb|CBJ22166.1| conserved hypothetical protein [Streptococcus mitis B6]
gi|307618206|gb|EFN97363.1| feS assembly protein SufB [Streptococcus mitis SK321]
Length = 470
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 215/487 (44%), Positives = 299/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNED+IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEDVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|238796352|ref|ZP_04639861.1| hypothetical protein ymoll0001_21800 [Yersinia mollaretii ATCC
43969]
gi|238719797|gb|EEQ11604.1| hypothetical protein ymoll0001_21800 [Yersinia mollaretii ATCC
43969]
Length = 485
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 290/490 (59%), Positives = 365/490 (74%), Gaps = 23/490 (4%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + D+ KG+NED+IR ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 5 VSEGRYKEGFFTQLATDELAKGINEDVIRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD--------------PELLRTYEKLGIPI 119
+ Y ++D+ D YY+AP S D E+ + +LG+P+
Sbjct: 65 LKAHYKSLDYQDYSYYSAPSCGSCDDSCDSQPGAVQQSSAENEYLTAEVESAFAQLGVPV 124
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
RE ++VAVDA+FDSVSV TT++ +L + G+IF EAI E+PDLV+KYL +
Sbjct: 125 RE--------GAEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGS 176
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IADEGS
Sbjct: 177 VVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADEGS 236
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI NFVTKR
Sbjct: 237 YVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKYSTVQNWFAGTES-TGGILNFVTKRA 295
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG+QQ D+GTKM+H+
Sbjct: 296 LCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTNGYQQADTGTKMIHIG 355
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG N GAHT PY+E +
Sbjct: 356 KNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPNSGAHTFPYVEVR 415
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+S LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEAQKL
Sbjct: 416 NNSAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEAQKL 475
Query: 480 IDISLEGSVG 489
+ ISLE SVG
Sbjct: 476 LAISLEHSVG 485
>gi|311069780|ref|YP_003974703.1| FeS cluster formation protein [Bacillus atrophaeus 1942]
gi|310870297|gb|ADP33772.1| FeS cluster formation protein [Bacillus atrophaeus 1942]
Length = 465
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 201/476 (42%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +YKYGF ++ + ++ +GL ++I+ IS K+EP WML++RL + + M P W
Sbjct: 7 DIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKDEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
A++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNALNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVFNLVTKRTVCEA-NATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|161503533|ref|YP_001570645.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160864880|gb|ABX21503.1| hypothetical protein SARI_01609 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 495
Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRSWLEMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 TDCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|111223955|ref|YP_714749.1| transport protein associated with Fe-S cluster assembly [Frankia
alni ACN14a]
gi|111151487|emb|CAJ63205.1| Transport protein associated with Fe-S cluster assembly [Frankia
alni ACN14a]
Length = 470
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 194/490 (39%), Positives = 295/490 (60%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + + YK+G+ +T+ D +GL+E ++R ISAKK+EP WM + RL
Sbjct: 1 MTTSAET--ALEGL--GSYKFGWADTDAYADDVQRGLSEAVVRNISAKKSEPSWMTDLRL 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ + D+ ++ TY+KLGIP
Sbjct: 57 KGLRLFERKPMPTWG-ADLSGIDFDNIKYFVRSTEKQAAE-WADLPEDIKATYDKLGIPE 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ + EHP+L ++Y +
Sbjct: 115 AEKQRLV------SGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPELFQEYFGS 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN++V++ GSF+Y+P GV+ + L YFRIN + GQFERTLII DEG+
Sbjct: 169 VIPVGDNKFAALNTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA +Y+T+QNW +YN VTKR
Sbjct: 229 YVHYVEGCTAPVYSSDSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A
Sbjct: 282 ACH-EGATMEWVDGNIGSKVTMKYPAVWLLGEHAKGEVLSIAFAGPGQHQDAGAKMVHAA 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S I+SK ++ G +YRG V ++ G+A SR+ +CD+LL+ + T PY++ +
Sbjct: 341 PRTSSTIISKSVARGGGRTSYRGLVQINEGSAASRSTVKCDALLVDTVSRSDTYPYVDVR 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA+ SK+ + LFY + RG+ EE A+A++V GFV + ++LPME+A+E +L
Sbjct: 401 EDDASIGHEASVSKVGADQLFYLMSRGLSEEEAMAMVVRGFVEPIARELPMEYALELNRL 460
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 461 IELQMEGAVG 470
>gi|304406760|ref|ZP_07388415.1| FeS assembly protein SufB [Paenibacillus curdlanolyticus YK9]
gi|304344293|gb|EFM10132.1| FeS assembly protein SufB [Paenibacillus curdlanolyticus YK9]
Length = 465
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 297/476 (62%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF + V ++ KGL +I+R IS K EP++ML +RL + ++ M P W
Sbjct: 7 EMEEYKYGFRDEHKAVFQSGKGLTPEIVRTISEMKGEPEFMLNFRLKSLEQFNKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DF+D+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-NMDDLDFNDIQYYVKPSEKQG-KTWEEVPAEIKETFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +E+L+K GVIF A+ EHP+L ++Y TV+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMQEDLEKQGVIFTDTDTALREHPELFQEYFGTVIPPADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE S+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKCEIPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA ++Y+T+QNW P IYN VTKR + + W
Sbjct: 238 TNSLHSAVVEIIVKKNARVRYTTIQNWAP-------NIYNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+G + G SIA++ Q D+G KM+HLA +TTS IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVLKGRGAKGMVLSIAVAGKGQHQDAGAKMIHLAPDTTSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG S R + S+ +CD+L++ N + TIPY E N + LEHEAT SK
Sbjct: 350 HGGKVTYRGLASFGRNSEGSKANIKCDTLILDNESTSDTIPYNEIMNDNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGLSEAEATQMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|62179960|ref|YP_216377.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|224584118|ref|YP_002637916.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|62127593|gb|AAX65296.1| putative ABC transporter [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224468645|gb|ACN46475.1| hypothetical protein SPC_2359 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322714427|gb|EFZ05998.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 495
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+C AHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCSAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|54025530|ref|YP_119772.1| hypothetical protein nfa35600 [Nocardia farcinica IFM 10152]
gi|54017038|dbj|BAD58408.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 485
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 192/475 (40%), Positives = 289/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ A +GL+ED++R ISAKKNEP+WMLE RL A R + P+W
Sbjct: 27 LGKYGYGWADPDAAGAAAQRGLSEDVVRDISAKKNEPEWMLEQRLKALRIFDRKPMPNWG 86
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ D++ ++ TY+KLGIP E++ L
Sbjct: 87 S-NLEGIDFDNIKYFVRSTEKQAAS-WDELPEDIKNTYDKLGIPEAEKQRLV------AG 138
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHP++ ++Y +V+P GDN ++ALN+A
Sbjct: 139 VAAQYESEVVYHQIREDLEAQGVIFLDTDTGLKEHPEIFQEYFGSVIPAGDNKFSALNTA 198
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 199 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKS 258
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAKAEA-GATMEWIDGN 310
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA +T+S IVSK ++ G
Sbjct: 311 IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPHTSSTIVSKSVARG 370
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA S++ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 371 GGRASYRGLVQVNKGAYGSKSTVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 430
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 SEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 485
>gi|297626660|ref|YP_003688423.1| FeS assembly protein SufB [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922425|emb|CBL56997.1| FeS assembly protein SufB [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 485
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 294/488 (60%), Gaps = 18/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
A + T D++ + D++ YKYG+ + A +GL+ED++R ISA K+EP+WML RL
Sbjct: 15 ASQSTADQLAE-DLNTYKYGWHDSDAYSAAAKRGLSEDVVRGISALKHEPEWMLAKRLKG 73
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+W ++FD + Y+ +D+ ++ +TY++LGIP E
Sbjct: 74 LKDFERKPMPTWG-ADLSHLNFDQIKYFVRSVDKQATS-WEDLPDDIRKTYDRLGIPEAE 131
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L V A ++S V +EL + GVIF A+ EHP+L ++Y TVV
Sbjct: 132 KERLV------AGVAAQYESEVVYQKINDELTRQGVIFTDTDTALREHPELFEEYFGTVV 185
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN +AALN+AV++ GSF+Y+PKGV + L YFR+N + GQFERTLII DE +YV
Sbjct: 186 PSADNKFAALNTAVWSGGSFIYVPKGVNVNIPLQAYFRMNTENLGQFERTLIIVDEDAYV 245
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LHAA+VE++ NA +Y+T+QNW G +YN VT+R
Sbjct: 246 HYVEGCTAPIYKTDSLHAAIVEIIVKKNARCRYTTIQNW-------SGNVYNLVTQRATV 298
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
++ W GS I KYP+C L GE + GE S+A + Q D+G KM+H A
Sbjct: 299 -AEGGQMEWVDGNIGSKINMKYPACYLLGEHAKGEALSMAFAGEGQHQDTGAKMVHAAPY 357
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IVSK IS YRG ++V A HS + +CD+LL+ + + T PY++ +
Sbjct: 358 TSSTIVSKSISRNGGRTGYRGLIAVEPNAHHSASSVKCDALLVDDVSRSDTYPYVDVQTD 417
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++EHEAT SKIS++ LFY +QRG+ E+ A A+IV GFV + ++LPME+A+E +L++
Sbjct: 418 DVSMEHEATISKISEDQLFYLMQRGLNEDEARAMIVRGFVEPIARELPMEYALELNRLVE 477
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 478 LQMEGSVG 485
>gi|293414999|ref|ZP_06657642.1| FeS assembly protein SufB [Escherichia coli B185]
gi|291432647|gb|EFF05626.1| FeS assembly protein SufB [Escherichia coli B185]
Length = 477
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 286/485 (58%), Positives = 365/485 (75%), Gaps = 22/485 (4%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+RL AY WL M++P W +
Sbjct: 2 NYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFRLNAYHAWLEMEEPHWLKAH 61
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVD-------------PELLRTYEKLGIPIREQEI 124
Y +++ D YY+AP + E+ +E+LG+P+RE +
Sbjct: 62 YDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGK- 120
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
+VAVDA+FDSVSV TT++E+L + G+IF EAI +HP+LV+KYL TVVP
Sbjct: 121 -------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGN 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + TGQFERT+++ADE SYVSY+
Sbjct: 174 DNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYI 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+ GGI NFVTKR C G
Sbjct: 234 EGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNN-TGGILNFVTKRALCEGE 292
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G QQ D+GTKM+H+ KNT S
Sbjct: 293 NSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKS 352
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG NCGAHT PY+E +N+S
Sbjct: 353 TIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQ 412
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISL
Sbjct: 413 LEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISL 472
Query: 485 EGSVG 489
E SVG
Sbjct: 473 EHSVG 477
>gi|329296198|ref|ZP_08253534.1| cysteine desulfurase activator complex subunit SufB [Plautia stali
symbiont]
Length = 497
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 294/506 (58%), Positives = 372/506 (73%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E D V+ + YK GF T +Q D+ G+NED++R ISAK+NEP+WMLE+RL
Sbjct: 1 MSRHSEASDDVQTWEGSLNYKEGFFTQLQTDELAHGINEDVVRAISAKRNEPEWMLEFRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DD 103
A+R WL M++P W + Y +D+ D YY+AP S D
Sbjct: 61 KAFRAWLEMEEPHWLKAHYDKLDYQDYSYYSAPSCGNCDDSCASEPGATQTSGSVASSDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + +LG+P+RE +VAVDA+FDSVSV TT++++L + G+IF
Sbjct: 121 LTKEVEDAFNQLGVPVRE--------GREVAVDAIFDSVSVSTTYRDKLAEQGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI +HP+LV+KYL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAILDHPELVQKYLGTVVPHNDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PG
Sbjct: 233 KTGQFERTILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFPG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
G+GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A++
Sbjct: 293 GE-GEGGILNFVTKRALCEGEHSKMSWTQSETGSAITWKYPSCILRGDYSVGEFYSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG +CGAHT PY+E++N+S LEHEATTS+I ++ +FYCLQRGI EE AI++I+NGF ++
Sbjct: 412 IGPDCGAHTFPYVETRNNSAQLEHEATTSRIGEDQMFYCLQRGISEEDAISMIINGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|242242209|ref|ZP_04796654.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
gi|242234382|gb|EES36694.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
gi|319401804|gb|EFV90012.1| feS assembly protein SufB [Staphylococcus epidermidis FRI909]
Length = 465
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF +I + ++ +GL E+I+ IS K EP WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDISIFRSERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L ++Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEELFREYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|223043065|ref|ZP_03613113.1| FeS assembly protein SufB [Staphylococcus capitis SK14]
gi|314933131|ref|ZP_07840496.1| FeS assembly protein SufB [Staphylococcus caprae C87]
gi|222443919|gb|EEE50016.1| FeS assembly protein SufB [Staphylococcus capitis SK14]
gi|313653281|gb|EFS17038.1| FeS assembly protein SufB [Staphylococcus caprae C87]
Length = 465
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+ IS K EP WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ DL ++Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEDLFREYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|296331746|ref|ZP_06874213.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675864|ref|YP_003867536.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296151071|gb|EFG91953.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414108|gb|ADM39227.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 465
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 DIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNSLNFDEITYYVKPSERSE-RSWDEVPDEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVYNLVTKRTVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPACILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|325002896|ref|ZP_08124008.1| FeS assembly protein SufB [Pseudonocardia sp. P1]
Length = 472
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 192/488 (39%), Positives = 293/488 (60%), Gaps = 18/488 (3%)
Query: 4 VRETVDKVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+R + + I + +Y +G+ +++ A +GL+ +++ IS K+EP+WMLE+R A
Sbjct: 1 MRTELTQEETIAALGRYDFGWADSDEAGAIAKRGLSSEVVADISRLKDEPEWMLEFRQKA 60
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ P W IDFD++ Y+ +D+ ++ TY+KLGIP E
Sbjct: 61 LDIFGKKPMPRWGS-DLSGIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGIPEAE 118
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S V +E+L++ GV+F+ A+ EHP+L K+Y +V+
Sbjct: 119 KARLV------AGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALKEHPELFKEYFGSVI 172
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P GDN ++ALNSAV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+YV
Sbjct: 173 PSGDNKFSALNSAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYV 232
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+AVVE+V +Y+T+QNW +YN VTKR
Sbjct: 233 HYVEGCTAPIYKTDSLHSAVVEIVVKKGGRCRYTTIQNW-------SNNVYNLVTKRAKA 285
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+HLA N
Sbjct: 286 -EEGATMEWVDGNLGSKVTMKYPAVWLMGEHAKGEVLSIAFAGEGQHQDAGAKMVHLAPN 344
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S I+SK ++ G +YRG + V+ A +SR+ +CD+LL+ + T PY++ +N
Sbjct: 345 TSSSIISKSVARGGGRTSYRGLIQVNPRAKNSRSTVKCDALLVDTISRSDTYPYVDIRND 404
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+SD+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI+
Sbjct: 405 DVSMGHEATVSKVSDDQLFYLMSRGLTEDEAMAMVVRGFVEPIARELPMEYALELNRLIE 464
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 465 LQMEGSVG 472
>gi|56413656|ref|YP_150731.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197362580|ref|YP_002142217.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56127913|gb|AAV77419.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094057|emb|CAR59557.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 495
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|198244344|ref|YP_002215757.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205352910|ref|YP_002226711.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857124|ref|YP_002243775.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|197938860|gb|ACH76193.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205272691|emb|CAR37605.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708927|emb|CAR33257.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326623503|gb|EGE29848.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 495
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLTISLEHSVG 495
>gi|307709207|ref|ZP_07645666.1| feS assembly protein SufB [Streptococcus mitis SK564]
gi|307620153|gb|EFN99270.1| feS assembly protein SufB [Streptococcus mitis SK564]
Length = 470
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 299/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNED+IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEDVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|307708559|ref|ZP_07645024.1| FeS assembly protein SufB [Streptococcus mitis NCTC 12261]
gi|322376422|ref|ZP_08050915.1| FeS assembly protein SufB [Streptococcus sp. M334]
gi|307615475|gb|EFN94683.1| FeS assembly protein SufB [Streptococcus mitis NCTC 12261]
gi|321282229|gb|EFX59236.1| FeS assembly protein SufB [Streptococcus sp. M334]
Length = 470
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 299/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNED+IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEDVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|149183558|ref|ZP_01861981.1| YurU [Bacillus sp. SG-1]
gi|148848725|gb|EDL62952.1| YurU [Bacillus sp. SG-1]
Length = 465
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 201/476 (42%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ + ++ +GL +I+ IS KNEP WML++RL + + M P W
Sbjct: 7 EIGDYKYGFSDKDVSIFRSKRGLTREIVEEISRMKNEPQWMLDFRLKSLEHFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNGLNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L+ G++F A+ E+ DL +++ + V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMQEDLEAQGIVFKDTDSALRENEDLFREHWAKVIPATDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVETPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVCEA-NATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMTHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKADGARSNIECDTLIMDNQSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|15616029|ref|NP_244334.1| hypothetical protein BH3467 [Bacillus halodurans C-125]
gi|10176090|dbj|BAB07186.1| BH3467 [Bacillus halodurans C-125]
Length = 465
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ + ++ +GL +I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 EIGEYKYGFSDRDVSIFRSKRGLTREIVEEISRMKQEPQWMLDFRLKSLEQFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLTELDFDDITYYVKPSEKSE-RSWDEVPEEIKNTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L++ G+IF A+ E+ D+ K+Y T++P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEELGIIFKDTDSALKENEDIFKEYFGTIIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADE S V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKTETPLQAYFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW P +YN VTKR + + W
Sbjct: 238 TNSLHSAVVEIIVKKDAYCRYTTIQNWAP-------NVYNLVTKRAVAY-ENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +++GE + G SIAI+ Q D+G K+LHLA N +S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVIMKGEGAKGTILSIAIAGKGQHQDAGAKVLHLAPNCSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+YRG R + S++ +CD+L++ N + TIPY E N+ LEHEAT SK
Sbjct: 350 QGGKVSYRGIAHFGRKSQGSKSKIECDTLIMDNESTSDTIPYNEILNNDITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|307704672|ref|ZP_07641572.1| feS assembly protein SufB [Streptococcus mitis SK597]
gi|307621781|gb|EFO00818.1| feS assembly protein SufB [Streptococcus mitis SK597]
Length = 470
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 299/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNED+IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEDVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|16080319|ref|NP_391146.1| FeS cluster formation protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221311212|ref|ZP_03593059.1| hypothetical protein Bsubs1_17726 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315539|ref|ZP_03597344.1| hypothetical protein BsubsN3_17642 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320454|ref|ZP_03601748.1| hypothetical protein BsubsJ_17605 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324738|ref|ZP_03606032.1| hypothetical protein BsubsS_17756 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321312812|ref|YP_004205099.1| FeS cluster formation protein [Bacillus subtilis BSn5]
gi|81342165|sp|O32162|SUFB_BACSU RecName: Full=FeS cluster assembly protein sufB
gi|2635763|emb|CAB15256.1| FeS cluster formation protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|291485737|dbj|BAI86812.1| hypothetical protein BSNT_04841 [Bacillus subtilis subsp. natto
BEST195]
gi|320019086|gb|ADV94072.1| FeS cluster formation protein [Bacillus subtilis BSn5]
Length = 465
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 DIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNSLNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVYNLVTKRTVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPACILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|57866421|ref|YP_188092.1| FeS assembly protein SufB [Staphylococcus epidermidis RP62A]
gi|251810287|ref|ZP_04824760.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|282875590|ref|ZP_06284461.1| FeS assembly protein SufB [Staphylococcus epidermidis SK135]
gi|293368294|ref|ZP_06614922.1| FeS assembly protein SufB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81675137|sp|Q5HQP8|Y500_STAEQ RecName: Full=UPF0051 protein SERP0500
gi|57637079|gb|AAW53867.1| FeS assembly protein SufB [Staphylococcus epidermidis RP62A]
gi|251806169|gb|EES58826.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|281295617|gb|EFA88140.1| FeS assembly protein SufB [Staphylococcus epidermidis SK135]
gi|291317541|gb|EFE57959.1| FeS assembly protein SufB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736830|gb|EGG73095.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU028]
gi|329737610|gb|EGG73856.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU045]
Length = 465
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 208/476 (43%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+ IS K EP WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L ++Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEELFREYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|322388022|ref|ZP_08061628.1| FeS assembly protein SufB [Streptococcus infantis ATCC 700779]
gi|321141043|gb|EFX36542.1| FeS assembly protein SufB [Streptococcus infantis ATCC 700779]
Length = 470
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 215/487 (44%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNED+IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEDVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSETEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|307703553|ref|ZP_07640495.1| feS assembly protein SufB [Streptococcus oralis ATCC 35037]
gi|307622960|gb|EFO01955.1| feS assembly protein SufB [Streptococcus oralis ATCC 35037]
Length = 470
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE++IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEEVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|222152528|ref|YP_002561703.1| hypothetical protein SUB0347 [Streptococcus uberis 0140J]
gi|222113339|emb|CAR40932.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length = 472
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 209/490 (42%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ Y++GF +++ + KGLNE ++R +SA K EP+WMLE+RL
Sbjct: 1 MSDKNEKVE-PKPIDLGDYQFGFHDDVEPIYSTGKGLNEAVVRELSAAKGEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W IDFDD+ YY +S DDV ++ T+E++GIP
Sbjct: 60 KSLETFQKMPMQTWG-ADLSDIDFDDIIYYQKASDKPA-RSWDDVPEKIKETFERIGIPQ 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K+E +K G+IF A+ E+PDL K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKDEFEKLGIIFTDTDSALKEYPDLFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 RAL-KDATVEWVDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|328554965|gb|AEB25457.1| FeS cluster formation protein [Bacillus amyloliquefaciens TA208]
Length = 465
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 200/476 (42%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ + ++ +GL ++I+ IS K+EP WML++RL + + M P W
Sbjct: 7 EIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKDEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNSLNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVYNLVTKRTVC-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKADGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|300716480|ref|YP_003741283.1| SufB protein [Erwinia billingiae Eb661]
gi|299062316|emb|CAX59433.1| SufB protein [Erwinia billingiae Eb661]
Length = 497
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 286/506 (56%), Positives = 369/506 (72%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVR--KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M +T D V+ + + +YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTDTSDDVQVWEGNHQKYKEGFFTQLQTEEFENGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L A+ WL M++P W + Y ++D+ D YY+AP S
Sbjct: 61 LKAFAAWLEMEEPHWLKANYKSLDYQDYSYYSAPSCGNCDDSCASEPGAQQTSGATPANY 120
Query: 106 --PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
E+ +++LG+P+RE +VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 121 LTEEVENAFKQLGVPVRE--------GQEVAVDAIFDSVSVSTTYRGKLAEQGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI +HP+LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIHDHPELVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 233 KTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQNWFSG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A++
Sbjct: 293 GESE-GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSVGEFFSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGHQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG +CGAHT PY+E +N++ LEHEATTS+I ++ +FYCLQRGI E+ AI++IVNGF ++
Sbjct: 412 IGADCGAHTFPYVEVRNNTAQLEHEATTSRIGEDQMFYCLQRGISEDDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|255325014|ref|ZP_05366120.1| FeS assembly protein SufB [Corynebacterium tuberculostearicum
SK141]
gi|311739474|ref|ZP_07713309.1| FeS assembly protein SufB [Corynebacterium pseudogenitalium ATCC
33035]
gi|255297579|gb|EET76890.1| FeS assembly protein SufB [Corynebacterium tuberculostearicum
SK141]
gi|311305290|gb|EFQ81358.1| FeS assembly protein SufB [Corynebacterium pseudogenitalium ATCC
33035]
Length = 479
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 200/489 (40%), Positives = 289/489 (59%), Gaps = 18/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ T D++ + Y+YG+ + A +GLNED++R ISAKK EP+WML RL
Sbjct: 8 PENKMTDDEIID-SIGAYEYGWHDSDAAGASARRGLNEDVVRDISAKKGEPEWMLNQRLK 66
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + P+W IDFD + YY Q+ +D+ ++ TY+KLGIP
Sbjct: 67 ALNIFDKKPVPTWG-ADLSGIDFDQIKYYVKSTEEQA-QTWEDLPDDIKATYDKLGIPEA 124
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V +E+L+ GVIF+ A+ ++P+L K+Y TV
Sbjct: 125 EKQRLV------AGVAAQYESEVVYHQIREDLESQGVIFVDTDTALRDYPELFKEYFGTV 178
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN ++ALNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +Y
Sbjct: 179 IPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY 238
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 239 VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SSNVYNLVTKRTK 291
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ W GS +T KYP+ + G + GE S+A + Q D+G KM H+A
Sbjct: 292 V-EEGGTMEWVDGNIGSKVTMKYPAVWMTGPYAKGEVLSVAFAGENQFQDTGAKMTHMAP 350
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T+S IVSK ++ YRG V V++ A HS + +CD+LL+ N + T PY + +N
Sbjct: 351 HTSSNIVSKSVARAGGRAAYRGLVQVNQNAHHSTSNVECDALLVDNISRSDTYPYNDIRN 410
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
L HEAT S++S+E LFY + RGI EE A+A+IV GFV + ++LPME+A+E +LI
Sbjct: 411 DHVTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALELNRLI 470
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 471 ELQMEGSVG 479
>gi|184200872|ref|YP_001855079.1| putative iron-sulfur cluster assembly protein SufB [Kocuria
rhizophila DC2201]
gi|183581102|dbj|BAG29573.1| putative iron-sulfur cluster assembly protein SufB [Kocuria
rhizophila DC2201]
Length = 491
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 205/490 (41%), Positives = 301/490 (61%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ E ++ +++ + QY+YG+ + N A +G+NE+++R ISAKK+EPDWM + RL
Sbjct: 18 TTISEILEMNPELEGIGQYQYGWADKNDAGASARRGVNEEVVRDISAKKSEPDWMTQLRL 77
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +++ ++ TYEKLGIP
Sbjct: 78 KGLKFFDRKPMPTWG-ADLSGIDFDNIKYFVRSTEQQAGS-WEELPEDIRNTYEKLGIPE 135
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L V A ++S V +E+L+ GVIFM A+ EHP+ ++Y T
Sbjct: 136 AERNRLV------AGVAAQYESEVVYHQIREDLEAQGVIFMDTDTALKEHPEFFEEYFGT 189
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE S
Sbjct: 190 VIPVGDNKFAALNTAVWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEDS 249
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR
Sbjct: 250 YVHYIEGCTAPIYKTDSLHSAVVEIICKKNARVRYTTIQNW-------SNNVYNLVTKRA 302
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ + GE + GE SIA + Q D+G+KM+H+A
Sbjct: 303 IAH-EGATMEWVDGNIGSKVTQKYPAVYMTGEHARGETLSIAFAGEGQHQDTGSKMVHIA 361
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ + YRG V V GA HS++ CD+LL+ + T PY++ +
Sbjct: 362 PNTSSSIVSKSVARNGGRSAYRGLVQVREGATHSKSNVVCDALLVDTISRSDTYPYVDIR 421
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT S++S+E LFY +QRG+PEE A+A+IV GFV + ++LPME+A+E +L
Sbjct: 422 EDDVTMGHEATVSRVSEEQLFYLMQRGMPEEEAMAMIVRGFVEPIARELPMEYALELNRL 481
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 482 IELQMEGSVG 491
>gi|238757752|ref|ZP_04618935.1| hypothetical protein yaldo0001_35090 [Yersinia aldovae ATCC 35236]
gi|238703995|gb|EEP96529.1| hypothetical protein yaldo0001_35090 [Yersinia aldovae ATCC 35236]
Length = 497
Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats.
Identities = 286/502 (56%), Positives = 363/502 (72%), Gaps = 35/502 (6%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + D+ KGLNE++IR ISAK+NEP+WML++RL AYR WL M++P W
Sbjct: 5 VSDGRYKEGFFTQLATDELAKGLNEEVIRAISAKRNEPEWMLDFRLGAYRSWLEMEEPHW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD--------------------------PE 107
+ Y ++D+ D YY+AP S D E
Sbjct: 65 LKANYKSLDYQDYSYYSAPSCGSCDDSCDSQPGAVQQSSADSSAPRDLSEQAMNEYLTAE 124
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ + +LG+P+RE ++VAVDA+FDSVSV TT++ +L + G+IF EAI
Sbjct: 125 VESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQ 176
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQ
Sbjct: 177 EYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQ 236
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
FERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G
Sbjct: 237 FERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGA-DS 295
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG Q
Sbjct: 296 TGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTNGHQ 355
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
Q D+GTKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG +
Sbjct: 356 QADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPD 415
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
GAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +
Sbjct: 416 SGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSE 475
Query: 468 LPMEFAVEAQKLIDISLEGSVG 489
LP+EFAVEAQKL+ ISLE SVG
Sbjct: 476 LPLEFAVEAQKLLAISLEHSVG 497
>gi|315185405|gb|EFU19177.1| Iron-regulated ABC transporter membrane component SufB [Spirochaeta
thermophila DSM 6578]
Length = 465
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 224/477 (46%), Positives = 303/477 (63%), Gaps = 18/477 (3%)
Query: 14 IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
ID +YKYGF ++ V + KGL+E++++ IS K EPDWM E+RL AYR + + P+
Sbjct: 6 IDFGEYKYGFSDAVKPVVQEEKGLSEEVVKRISYYKEEPDWMREFRLRAYRIFKSKPMPT 65
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W + A+DFD++YYY P G +S D+V + RT+E+LGIP E++ LAG
Sbjct: 66 WG-VDLSALDFDEIYYYVRPTDGAG-RSWDEVPETIKRTFERLGIPEAERKYLAG----- 118
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
V A +DS V + KEEL GVIF A+ E+PDLV+KY TVVP GDN +AALN
Sbjct: 119 --VGAQYDSEMVYHSIKEELASKGVIFCDPETAVREYPDLVRKYFGTVVPPGDNTFAALN 176
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
SAV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGS+V Y+EGCTAP
Sbjct: 177 SAVWSGGSFVYVPKGVHVDIPLQAYFRINTQNMGQFERTLIIADEGSFVHYIEGCTAPVY 236
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
LHAAVVE++AL A ++YST+QNW G +YN VTKR + + W
Sbjct: 237 TTASLHAAVVEIIALPGARVRYSTIQNW-------SGDVYNLVTKRAVAY-EHATVEWVD 288
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
GS T KYPS L G + GE SIA + Q+ D+G KM+H A +T+S I SK IS
Sbjct: 289 GNIGSRKTMKYPSVYLMGPYAHGEVLSIAFAGKGQEQDTGAKMIHAASHTSSVITSKSIS 348
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
TYRG V V G +R+ CD+L++ + T PY+E K+ ++EHEA S
Sbjct: 349 KDGGIATYRGLVKVEEGVRGARSHVVCDALIMDPQSVSRTFPYMEIKSPHVHMEHEAKVS 408
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++S++ LFY + RG E+ A A+IVNGF+ ++++LPME+AVE +LI++ +EGSVG
Sbjct: 409 RVSEQQLFYLMSRGFSEDEAAAMIVNGFIDPLVKQLPMEYAVELNRLIELEMEGSVG 465
>gi|307718278|ref|YP_003873810.1| hypothetical protein STHERM_c05720 [Spirochaeta thermophila DSM
6192]
gi|306532003|gb|ADN01537.1| hypothetical protein STHERM_c05720 [Spirochaeta thermophila DSM
6192]
Length = 465
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 222/477 (46%), Positives = 303/477 (63%), Gaps = 18/477 (3%)
Query: 14 IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
ID +YKYGF ++ V + KGL+E++++ IS K EPDWM E+RL AYR + + P+
Sbjct: 6 IDFGEYKYGFSDVVKPVVQEEKGLSEEVVKRISYYKEEPDWMREFRLRAYRIFKSKPMPT 65
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W + A++FDD+YYY P G +S D+V + RT+++LGIP E++ LAG
Sbjct: 66 WG-VDLSALNFDDIYYYVRPTDRAG-RSWDEVPETIKRTFDRLGIPEAERKYLAG----- 118
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
V A +DS V + KEEL GVIF A+ E+PDL++KY TVVP GDN +AALN
Sbjct: 119 --VGAQYDSEMVYHSIKEELASKGVIFCDPETAVREYPDLMRKYFGTVVPPGDNTFAALN 176
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
SAV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGS+V Y+EGCTAP
Sbjct: 177 SAVWSGGSFVYVPKGVHVDIPLQAYFRINTQNMGQFERTLIIADEGSFVHYIEGCTAPVY 236
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
LHAAVVE++AL A ++YST+QNW G +YN VTKR + + W
Sbjct: 237 TTASLHAAVVEIIALPGARVRYSTIQNW-------SGDVYNLVTKRAVAY-EHATVEWVD 288
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
GS T KYPS L G + GE SIA + Q+ D+G KM+H A +T+S I SK IS
Sbjct: 289 GNIGSRKTMKYPSVYLMGPYAHGEVLSIAFAGKGQEQDTGAKMIHAASHTSSVITSKSIS 348
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
TYRG V V G +R+ CD+L++ + T PY+E K+ ++EHEA S
Sbjct: 349 KDGGIATYRGLVRVEEGVRGARSHVVCDALIMDPQSVSRTFPYMEIKSPHVHMEHEAKVS 408
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++S++ LFY + RG E+ A A+IVNGF+ ++++LPME+AVE +LI++ +EGSVG
Sbjct: 409 RVSEQQLFYLMSRGFSEDEAAAMIVNGFIDPLVKQLPMEYAVELNRLIELEMEGSVG 465
>gi|322375388|ref|ZP_08049901.1| FeS assembly protein SufB [Streptococcus sp. C300]
gi|321279651|gb|EFX56691.1| FeS assembly protein SufB [Streptococcus sp. C300]
Length = 470
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE++IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEEVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|310767544|gb|ADP12494.1| cysteine desulfurase activator complex subunit SufB [Erwinia sp.
Ejp617]
Length = 497
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 286/506 (56%), Positives = 368/506 (72%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVR--KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + D V+ + +YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTDASDDVQVWEGSHQKYKEGFFTQLQTEEFEHGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP---------------KSIVGPQSLDD 103
L A+ WL M++P W + Y +D+ D YY+AP G + D
Sbjct: 61 LKAFAAWLEMEEPHWLKANYKKLDYQDYSYYSAPSCGSCDDSCASEPGATQASGGNAPDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ +++LG+P+RE +VAVDA+FDSVSV TT++++L K G+IF
Sbjct: 121 LTQEVEEAFKQLGVPVRE--------GQEVAVDAIFDSVSVSTTYRDKLAKDGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI ++P LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIHQYPQLVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 233 KTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQNWFSG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ + GEF+S+A++
Sbjct: 293 GDSE-GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNAIGEFFSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG CGAHT PY+E +N++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++
Sbjct: 412 IGAECGAHTFPYVEVRNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|261246578|emb|CBG24388.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
Length = 495
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KY TVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYPTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|322392112|ref|ZP_08065574.1| FeS assembly protein SufB [Streptococcus peroris ATCC 700780]
gi|321145012|gb|EFX40411.1| FeS assembly protein SufB [Streptococcus peroris ATCC 700780]
Length = 478
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 215/487 (44%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNED+IR +SA K EP+WMLE+RL +Y
Sbjct: 9 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEDVIRELSAAKGEPEWMLEFRLKSY 68
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 69 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 126
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 127 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 179
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 180 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 239
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 240 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 292
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 293 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 351
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 352 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 411
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 412 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 471
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 472 EMEGSVG 478
>gi|86740365|ref|YP_480765.1| FeS assembly protein SufB [Frankia sp. CcI3]
gi|86567227|gb|ABD11036.1| Iron-regulated ABC transporter membrane component SufB [Frankia sp.
CcI3]
Length = 470
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 192/490 (39%), Positives = 295/490 (60%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + + Y++G+ +T+ +GL+E ++R ISAKK+EP WM + RL
Sbjct: 1 MTTSAET--ALEGL--GSYRFGWADTDAYAADVERGLSEAVVRGISAKKSEPSWMTDLRL 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + P+W IDFD++ Y+ + +D+ ++ TY++LGIP
Sbjct: 57 KGLRLFERKPMPTWG-ADLSGIDFDNIKYFVRSTEKQA-EEWEDLPEDIRATYDRLGIPE 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GV+F+ + EHP+L ++Y +
Sbjct: 115 AEKQRLI------AGVAAQYESEVVYHKIREDLEEQGVLFLDTDSGLREHPELFQEYFGS 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN+AV++ GSF+Y+P GV+ + L YFRIN + GQFERTLII DEG+
Sbjct: 169 VIPVGDNKFAALNTAVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V NA +Y+T+QNW +YN VTKR
Sbjct: 229 YVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARCRYTTIQNW-------SNNVYNLVTKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A
Sbjct: 282 ACH-EGGTMEWIDGNIGSKVTMKYPAVWLLGEHAKGEVLSIAFAGAGQHQDAGAKMVHAA 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S IVSK ++ G +YRG V ++ G++ SR+ +CD+LL+ + T PY++ +
Sbjct: 341 PRTSSTIVSKSVARGGGRTSYRGLVQINEGSSASRSTVKCDALLVDTVSRSDTYPYVDVR 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA+ SK+ ++ LFY + RG+ EE A+A++V GFV + ++LPME+A+E +L
Sbjct: 401 EDDASIGHEASVSKVGEDQLFYLMSRGLSEEEAMAMVVRGFVEPIARELPMEYALELNRL 460
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 461 IELQMEGAVG 470
>gi|154687376|ref|YP_001422537.1| YurU [Bacillus amyloliquefaciens FZB42]
gi|154353227|gb|ABS75306.1| YurU [Bacillus amyloliquefaciens FZB42]
Length = 465
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 200/476 (42%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 EIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNSLNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L++ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEEQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVYNLVTKRTVC-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKADGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|218236050|ref|YP_002369781.1| FeS assembly protein SufB [Bacillus cereus B4264]
gi|218164007|gb|ACK63999.1| FeS assembly protein SufB [Bacillus cereus B4264]
Length = 463
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 203/474 (42%), Positives = 290/474 (61%), Gaps = 18/474 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ YKYGF+ ++ + +A +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNDLDFDEITYYVKPSEKSE-KSWDEVPDEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V A +SR+ +CD+L++ N + TIPY E KN +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGS 463
>gi|238765283|ref|ZP_04626211.1| hypothetical protein ykris0001_43320 [Yersinia kristensenii ATCC
33638]
gi|238696506|gb|EEP89295.1| hypothetical protein ykris0001_43320 [Yersinia kristensenii ATCC
33638]
Length = 508
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 290/511 (56%), Positives = 368/511 (72%), Gaps = 36/511 (7%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D+V+ + +YK GF T + D+ KGL+ED+IR ISAK+NEP+WMLE+RL AYR
Sbjct: 7 EVPDEVQAWVSDGRYKEGFFTQLATDELAKGLSEDVIRAISAKRNEPEWMLEFRLGAYRN 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------------- 105
WL M++P W + Y ++D+ D YY+AP S D
Sbjct: 67 WLEMEEPHWLKAHYKSLDYQDYSYYSAPSCGSCDDSCDSQPGAVQQSSADSAAPRDLSEQ 126
Query: 106 -------PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E+ + +LG+P+RE ++VAVDA+FDSVSV TT++ +L + G+I
Sbjct: 127 AMNEYLTAEVESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYRGKLAEQGII 178
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
F EAI E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYF
Sbjct: 179 FCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYF 238
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
RIN TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQ
Sbjct: 239 RINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQ 298
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
NW+ G GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+
Sbjct: 299 NWFAGA-DSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFF 357
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
S+A++NG QQ D+GTKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQ
Sbjct: 358 SVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQ 417
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
CDS+LIG + GAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVN
Sbjct: 418 CDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVN 477
Query: 459 GFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
GF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 478 GFCKDVFSELPLEFAVEAQKLLAISLEHSVG 508
>gi|157693675|ref|YP_001488137.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032]
gi|157682433|gb|ABV63577.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bacillus pumilus SAFR-032]
Length = 465
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV +YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 DVGEYKYGFSDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
A++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNALNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K++L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVFNLVTKRTVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|56964738|ref|YP_176469.1| ABC transporter [Bacillus clausii KSM-K16]
gi|56910981|dbj|BAD65508.1| ABC transporter [Bacillus clausii KSM-K16]
Length = 465
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 206/476 (43%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + ++ M P W
Sbjct: 7 DIGEYKYGFSDRDVSIFRSGRGLTKEIVEEISRMKEEPQWMLDFRLKSLEQFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKASDKTE-RSWDEVPEEIKNTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ GV+F A+ E+ D+ K+Y +TV+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLESLGVVFKDTDSALKENEDIFKEYFATVIPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADE S V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ DNA +Y+T+QNW P +YN VTKR + + W
Sbjct: 238 TNSLHSAVVEIIVKDNAYCRYTTIQNWAP-------NVYNLVTKRAVA-DKGATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ ++RGE + G SIAI+ Q D+G K+ HLA N +S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVIMRGEGAKGTVLSIAIAGKGQHQDAGAKVTHLAPNCSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG R + S++ +CD+L++ N + TIPY E N++ LEHEAT SK
Sbjct: 350 QGGKVTYRGICHFGRKSDGSKSKIECDTLIMDNQSTSDTIPYNEILNNNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEDQLFYLMSRGVSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|283769984|ref|ZP_06342876.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
gi|283460131|gb|EFC07221.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
Length = 465
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 210/476 (44%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML +RL + + + M P W
Sbjct: 7 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLGFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|27467528|ref|NP_764165.1| hypothetical protein SE0610 [Staphylococcus epidermidis ATCC 12228]
gi|81843950|sp|Q8CTA3|Y610_STAES RecName: Full=UPF0051 protein SE_0610
gi|27315071|gb|AAO04207.1|AE016745_306 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
Length = 465
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 208/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+ IS K EP WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L ++Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEELFREYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA ++ Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFASKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|315613317|ref|ZP_07888226.1| FeS assembly protein SufB [Streptococcus sanguinis ATCC 49296]
gi|315314552|gb|EFU62595.1| FeS assembly protein SufB [Streptococcus sanguinis ATCC 49296]
Length = 478
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNED+IR +SA K EP+WMLE+RL +Y
Sbjct: 9 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEDVIRELSAAKGEPEWMLEFRLKSY 68
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 69 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 126
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 127 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 179
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 180 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 239
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 240 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 292
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 293 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 351
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 352 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 411
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 412 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 471
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 472 EMEGSVG 478
>gi|293365602|ref|ZP_06612311.1| FeS assembly protein SufB [Streptococcus oralis ATCC 35037]
gi|291315970|gb|EFE56414.1| FeS assembly protein SufB [Streptococcus oralis ATCC 35037]
Length = 478
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE++IR +SA K EP+WMLE+RL +Y
Sbjct: 9 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEEVIRELSAAKGEPEWMLEFRLKSY 68
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 69 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 126
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 127 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 179
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 180 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 239
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 240 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 292
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 293 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 351
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 352 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 411
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 412 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 471
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 472 EMEGSVG 478
>gi|22536330|ref|NP_687181.1| hypothetical protein SAG0145 [Streptococcus agalactiae 2603V/R]
gi|76788577|ref|YP_328876.1| hypothetical protein SAK_0203 [Streptococcus agalactiae A909]
gi|76799311|ref|ZP_00781476.1| FeS assembly protein SufB [Streptococcus agalactiae 18RS21]
gi|77405126|ref|ZP_00782225.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|77409045|ref|ZP_00785763.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77411817|ref|ZP_00788152.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
gi|22533154|gb|AAM99053.1|AE014198_1 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|76563634|gb|ABA46218.1| FeS assembly protein SufB [Streptococcus agalactiae A909]
gi|76585338|gb|EAO61931.1| FeS assembly protein SufB [Streptococcus agalactiae 18RS21]
gi|77162152|gb|EAO73128.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
gi|77172339|gb|EAO75490.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77176269|gb|EAO79039.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|319744057|gb|EFV96434.1| FeS assembly protein SufB [Streptococcus agalactiae ATCC 13813]
Length = 472
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 210/490 (42%), Positives = 296/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ + ID+ +YK+GF +++ + KGLNE +IR +SA K EP+WML++RL
Sbjct: 1 MSEINEKVE-PQPIDLGEYKFGFHDDVKPIYSTGKGLNEAVIRELSAAKGEPEWMLDFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W IDFDD+ YY + DDV ++ T+E++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDIDFDDIIYYQKASDKPA-RDWDDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G++F A+ E+P+L KKY +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPELFKKYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|194446209|ref|YP_002040625.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194404872|gb|ACF65094.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 495
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 372/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLDMDEPHWLKAYYDKLNYQDYSYYSAPSCGNCDDNCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|238791668|ref|ZP_04635305.1| hypothetical protein yinte0001_13810 [Yersinia intermedia ATCC
29909]
gi|238728772|gb|EEQ20289.1| hypothetical protein yinte0001_13810 [Yersinia intermedia ATCC
29909]
Length = 497
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 290/502 (57%), Positives = 364/502 (72%), Gaps = 35/502 (6%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ ++YK GF T + D+ KGLNED+IR ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 5 VSENRYKEGFFTQLATDQLAKGLNEDVIRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD--------------------------PE 107
+ Y ++D+ D YY+AP S D E
Sbjct: 65 LKANYKSLDYQDYSYYSAPSCGSCDDSCDSQPGAVQQSSADSAAPRDLSEQAMNEYLTAE 124
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ + +LG+P+RE +VAVDA+FDSVSV TT++ +L + G+IF SEAI
Sbjct: 125 VESAFAQLGVPVRE--------GVEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFSEAIQ 176
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQ
Sbjct: 177 EYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQ 236
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
FERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G
Sbjct: 237 FERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGA-DS 295
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG Q
Sbjct: 296 TGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTNGHQ 355
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
Q D+GTKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG +
Sbjct: 356 QADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPD 415
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
GAHT PY+E +N+S LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +
Sbjct: 416 SGAHTFPYVEVRNNSAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSE 475
Query: 468 LPMEFAVEAQKLIDISLEGSVG 489
LP+EFAVEAQKL+ ISLE SVG
Sbjct: 476 LPLEFAVEAQKLLAISLEHSVG 497
>gi|307131460|ref|YP_003883476.1| SufB protein [Dickeya dadantii 3937]
gi|306528989|gb|ADM98919.1| SufB protein [Dickeya dadantii 3937]
Length = 499
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 283/493 (57%), Positives = 365/493 (74%), Gaps = 26/493 (5%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+D +YK GF T + +D+ G+NED++R ISA++NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 LDDGRYKEGFFTELAMDQLAHGINEDVVRAISARRNEPEWMLEFRLSAYRAWLQMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSL-----------------DDVDPELLRTYEKLG 116
+ Y +++ D YY+AP S + + E+ ++KLG
Sbjct: 76 LKAHYERLNYQDYSYYSAPSCGQCDDSCGSQPGAQQQPAGDAAHGNYLTREVEDAFDKLG 135
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+P+RE + VAVDA+FDSVSV TT+++EL + G+IF SEAI HP+LV++Y
Sbjct: 136 VPVREGK--------DVAVDAIFDSVSVATTYRDELAQQGIIFCSFSEAIQAHPELVRQY 187
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVP DNF+AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQFERT++IAD
Sbjct: 188 LGTVVPANDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIAD 247
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI NFVT
Sbjct: 248 DDSYVSYIEGCSAPVRDSYQLHAAVVEVIVNKNAEVKYSTVQNWFAGQGSE-GGILNFVT 306
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR C G S++SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A+++G QQ D+GTKM+
Sbjct: 307 KRALCAGDHSRMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTSGHQQADTGTKMI 366
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ KNT S I++KGISAG S NTYRG V + A ++RNFTQCDS+LIG +CGAHT PY+
Sbjct: 367 HIGKNTRSTIIAKGISAGHSENTYRGLVKIMSSATNARNFTQCDSMLIGGDCGAHTFPYV 426
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEA
Sbjct: 427 EVRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA 486
Query: 477 QKLIDISLEGSVG 489
QKL+ ISLE SVG
Sbjct: 487 QKLLSISLEHSVG 499
>gi|259908557|ref|YP_002648913.1| cysteine desulfurase activator complex subunit SufB [Erwinia
pyrifoliae Ep1/96]
gi|224964179|emb|CAX55686.1| SufB protein [Erwinia pyrifoliae Ep1/96]
gi|283478522|emb|CAY74438.1| FeS assembly protein SufB [Erwinia pyrifoliae DSM 12163]
Length = 497
Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats.
Identities = 285/506 (56%), Positives = 368/506 (72%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVR--KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + + V+ + +YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTDASEDVQVWEGSHQKYKEGFFTQLQTEEFEHGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP---------------KSIVGPQSLDD 103
L A+ WL M++P W + Y +D+ D YY+AP G + D
Sbjct: 61 LKAFAAWLEMEEPHWLKANYKKLDYQDYSYYSAPSCGSCDDSCASEPGATQASGGNAPDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ +++LG+P+RE +VAVDA+FDSVSV TT++++L K G+IF
Sbjct: 121 LTQEVEEAFKQLGVPVRE--------GQEVAVDAIFDSVSVSTTYRDKLAKDGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI ++P LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIHQYPQLVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 233 KTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQNWFSG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ + GEF+S+A++
Sbjct: 293 GDSE-GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNAIGEFFSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG CGAHT PY+E +N++ LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++
Sbjct: 412 IGAECGAHTFPYVEVRNNTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|308174997|ref|YP_003921702.1| FeS cluster formation protein [Bacillus amyloliquefaciens DSM 7]
gi|307607861|emb|CBI44232.1| FeS cluster formation protein [Bacillus amyloliquefaciens DSM 7]
gi|328913319|gb|AEB64915.1| FeS cluster formation protein [Bacillus amyloliquefaciens LL3]
Length = 465
Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats.
Identities = 200/476 (42%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 EIGEYKYGFHDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNSLNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEAQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVYNLVTKRTVC-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKADGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|322833501|ref|YP_004213528.1| FeS assembly protein SufB [Rahnella sp. Y9602]
gi|321168702|gb|ADW74401.1| FeS assembly protein SufB [Rahnella sp. Y9602]
Length = 507
Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats.
Identities = 282/495 (56%), Positives = 364/495 (73%), Gaps = 31/495 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YK GF T + D+ G+NED++R ISAK+NEP+WMLE+RL AY WL M++P W +
Sbjct: 21 NYKEGFFTQLATDELASGINEDVVRAISAKRNEPEWMLEFRLQAYHAWLKMEEPHWLKAY 80
Query: 78 YPAIDFDDLYYYAAPKS-----------------------IVGPQSLDDVDPELLRTYEK 114
Y +D+ D YY+AP + ++ + + E+ + +E+
Sbjct: 81 YTPLDYQDYSYYSAPSCGSCDDSCGSQPGATQQSGGESLGVPAGEANNYLTSEVEKAFEQ 140
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P+RE + +VAVDA+FDSVSV TT++++L +SGVIF EAI E+P+LV+
Sbjct: 141 LGVPVREGK--------EVAVDAIFDSVSVSTTYRDKLAESGVIFCSFGEAIHEYPELVR 192
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
KYL TVVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++I
Sbjct: 193 KYLGTVVPAQDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILI 252
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G GGI NF
Sbjct: 253 ADEGSYVSYIEGCSAPVRDTYQLHAAVVEVILHKDAEVKYSTVQNWFSGSKDSSGGILNF 312
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A+++G QQ D+GTK
Sbjct: 313 VTKRALCEGAGSKMSWTQSETGSAITWKYPSVILKGDNSIGEFFSVALTSGKQQADTGTK 372
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG + AHT P
Sbjct: 373 MIHIGKNTKSTIISKGISAGHSQNSYRGLVKILPSAENARNFTQCDSMLIGADSAAHTFP 432
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAV
Sbjct: 433 YVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAV 492
Query: 475 EAQKLIDISLEGSVG 489
EAQKL+ ISLE SVG
Sbjct: 493 EAQKLLAISLEHSVG 507
>gi|11342546|emb|CAC17125.1| SufB protein [Erwinia chrysanthemi]
Length = 499
Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats.
Identities = 282/493 (57%), Positives = 364/493 (73%), Gaps = 26/493 (5%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+D +YK GF T + +D+ G+NED++R ISA++NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 LDDGRYKEGFFTELAMDQLAHGINEDVVRAISARRNEPEWMLEFRLSAYRAWLQMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSL-----------------DDVDPELLRTYEKLG 116
+ Y +++ D YY+AP S + + E+ ++KLG
Sbjct: 76 LKAHYERLNYQDYSYYSAPSCGQCDDSCGSQPGAQQQPAGDAAHGNYLTREVEDAFDKLG 135
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+P+RE + VAVDA+FDSVSV TT+++EL + G+IF SEAI HP+LV++Y
Sbjct: 136 VPVREGK--------DVAVDAIFDSVSVATTYRDELAQQGIIFCSFSEAIQAHPELVRQY 187
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVP DNF+AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQFERT++IAD
Sbjct: 188 LGTVVPANDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIAD 247
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GI NFVT
Sbjct: 248 DDSYVSYIEGCSAPVRDSYQLHAAVVEVIVNKNAEVKYSTVQNWFAGQGSES-GILNFVT 306
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR C G S++SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A+++G QQ D+GTKM+
Sbjct: 307 KRALCAGDHSRMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTSGHQQADTGTKMI 366
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ KNT S I++KGISAG S NTYRG V + A ++RNFTQCDS+LIG +CGAHT PY+
Sbjct: 367 HIGKNTRSTIIAKGISAGHSENTYRGLVKIMSSATNARNFTQCDSMLIGGDCGAHTFPYV 426
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEA
Sbjct: 427 EVRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA 486
Query: 477 QKLIDISLEGSVG 489
QKL+ ISLE SVG
Sbjct: 487 QKLLSISLEHSVG 499
>gi|332161644|ref|YP_004298221.1| cysteine desulfurase activator complex subunit SufB [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318605864|emb|CBY27362.1| iron-sulfur cluster assembly protein SufB [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665874|gb|ADZ42518.1| cysteine desulfurase activator complex subunit SufB [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 503
Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats.
Identities = 288/506 (56%), Positives = 368/506 (72%), Gaps = 31/506 (6%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D V+ + +YK GF T + D+ KG+NED+IR ISAK+NEP+WMLE+RL AYR
Sbjct: 7 EVPDDVQAWVSDGRYKEGFFTQLATDELAKGINEDVIRAISAKRNEPEWMLEFRLGAYRS 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL---------------------DD 103
WL M++P W + Y ++D+ D YY+AP + +
Sbjct: 67 WLEMEEPHWLKAHYKSLDYQDYSYYSAPSCGSCDDNCGSQSGALQQSSVEDSAAHTMNEY 126
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + +LG+P+RE ++VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 127 LTAEVESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFG 178
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN
Sbjct: 179 EAIQEYPDLVRKYLGSVVPATDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAA 238
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G
Sbjct: 239 KTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAG 298
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++
Sbjct: 299 A-DSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALT 357
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
NG QQ D+GTKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+L
Sbjct: 358 NGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSML 417
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG + GAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++
Sbjct: 418 IGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKD 477
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 478 VFSELPLEFAVEAQKLLAISLEHSVG 503
>gi|89100663|ref|ZP_01173520.1| YurU [Bacillus sp. NRRL B-14911]
gi|89084609|gb|EAR63753.1| YurU [Bacillus sp. NRRL B-14911]
Length = 465
Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF + ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 EIGDYKYGFADKDVSIFRSKRGLTKEIVEEISKLKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLASLNFDEITYYVKPSEKTE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L+ G++F A+ E+ DL +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMQEDLEAKGIVFKDTDSALRENEDLFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVCEA-NATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARANIECDTLIMDNQSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|289551291|ref|YP_003472195.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
lugdunensis HKU09-01]
gi|315658797|ref|ZP_07911664.1| FeS assembly protein SufB [Staphylococcus lugdunensis M23590]
gi|289180823|gb|ADC88068.1| Iron-sulfur cluster assembly protein SufB [Staphylococcus
lugdunensis HKU09-01]
gi|315495921|gb|EFU84249.1| FeS assembly protein SufB [Staphylococcus lugdunensis M23590]
Length = 465
Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 207/476 (43%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+ IS K EP WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ DL ++Y ++V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEDLFREYFASVIPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|194015426|ref|ZP_03054042.1| FeS assembly protein SufB [Bacillus pumilus ATCC 7061]
gi|194012830|gb|EDW22396.1| FeS assembly protein SufB [Bacillus pumilus ATCC 7061]
Length = 465
Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV +YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 DVGEYKYGFSDKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLELFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
A++FD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNALNFDEITYYVKPSERSE-RSWDEVPEEIKETFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K++L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE+V +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TNSLHSAVVEIVVKKGGYCRYTTIQNWA-------NNVFNLVTKRTVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|330850939|ref|YP_004376689.1| iron-sulfur cluster formation ABC transporter [Fistulifera sp. JPCC
DA0580]
gi|328835759|dbj|BAK19055.1| iron-sulfur cluster formation ABC transporter [Fistulifera sp. JPCC
DA0580]
Length = 486
Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 291/481 (60%), Positives = 376/481 (78%), Gaps = 5/481 (1%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + K+ Y+YGF TNI+ + KGLN I IS KK E ++L +RL AY++W M
Sbjct: 11 NNITKLVNQTYQYGFSTNIEKEIIEKGLNTKTIHLISQKKKETPFLLNFRLKAYKKWKQM 70
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+P+WA +++P I++ D+ YY+APKS + L +VDPELL+T+EKLGI + EQ+ L
Sbjct: 71 SEPNWAYLKFPEINYQDIIYYSAPKSQKKLKDLSEVDPELLKTFEKLGISLSEQKRL--- 127
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
+ VAVD VFDSVS+ TTF+EEL K GVIF ISEAI ++PDL++KYL +VVP+GDN++
Sbjct: 128 --TNVAVDVVFDSVSIGTTFQEELSKHGVIFASISEAINDYPDLIEKYLGSVVPIGDNYF 185
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAVFTDGSF YIP+ CP++LSTYFRIN++ +GQFERTLIIA++ S V+YLEGCT
Sbjct: 186 AALNSAVFTDGSFCYIPENTICPLDLSTYFRINDQKSGQFERTLIIAEKNSQVNYLEGCT 245
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQ D NQLHAAVVEL+AL+NA IKYSTVQNWY G+ GKGG+YNFVTKRG C G SKI
Sbjct: 246 APQYDTNQLHAAVVELIALENANIKYSTVQNWYSGNEFGKGGVYNFVTKRGLCAGANSKI 305
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSCLL G+++ GEFYS+A++N +QQ D+GTKM+H+ K T SRI+S
Sbjct: 306 SWTQVETGSAITWKYPSCLLIGDKAQGEFYSVALTNNYQQADTGTKMIHMGKYTRSRIIS 365
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGISAG S N+YRG+V+V A SRN++QCDSLLIGN A+T P+I +N++ +EHE
Sbjct: 366 KGISAGKSKNSYRGQVAVTNKAIGSRNYSQCDSLLIGNLSNANTFPFISVQNATSKIEHE 425
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A+TSKI +E +FY LQRGI E AI L+++GF +E+ +LP+EFA EA KL+ + LEGSV
Sbjct: 426 ASTSKIGEEQIFYFLQRGIGLEKAIELMISGFCKEIFTELPLEFAAEADKLLTLKLEGSV 485
Query: 489 G 489
G
Sbjct: 486 G 486
>gi|111024146|ref|YP_707118.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|110823676|gb|ABG98960.1| FeS assembly protein [Rhodococcus jostii RHA1]
Length = 486
Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 195/490 (39%), Positives = 294/490 (60%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
A E + + I + Y YG+ + A +GL+ED++R ISAKK+EPDWML+ RL
Sbjct: 13 SANAEPLTQEETIASLGHYGYGWSDSDEAGASAQRGLSEDVVRDISAKKSEPDWMLDIRL 72
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 73 RALKTFDKKPMPNWGS-NLEGIDFDNIKYFVRSSEKQA-ESWEDLPEDIKNTYDKLGIPE 130
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V + +E+L+ GVIF+ + +HP+L ++Y T
Sbjct: 131 AEKQRLV------AGVAAQYESEVVYHSIREDLEAQGVIFLDTDTGLKQHPELFREYFGT 184
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 185 VIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGA 244
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 245 SVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGHCRYTTIQNW-------SNNVYNLVTKRT 297
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
S + W GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA
Sbjct: 298 KVEAGGS-MEWIDGNIGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLA 356
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S I+SK ++ G +YRG V V++GA S++ +CD+LL+ + T PY++ +
Sbjct: 357 PYTSSTIISKSVARGGGRASYRGLVQVNKGAHGSKSTVKCDALLVDQISRSDTYPYVDIR 416
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT SK+SD+ LFY + RG+ E+ A+A +V GFV + ++LPME+A+E +L
Sbjct: 417 EDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMATVVRGFVEPIAKELPMEYALELNRL 476
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 477 IELQMEGAVG 486
>gi|322411114|gb|EFY02022.1| ABC transporter-associated protein [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 472
Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 208/490 (42%), Positives = 296/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ + ID+ Y++GF +++ + KGL+E ++R +SA KNEP+WMLE+RL
Sbjct: 1 MSDINEKVEA-QPIDLGDYQFGFHDDVEPIYSTGKGLSEAVVRELSAAKNEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W I+FDD+ YY +S DDV ++ T+E++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPDKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K+E +K G+IF A+ E+PDL K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKDEFEKLGIIFTDTDSALKEYPDLFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 RALAD-ATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|52081752|ref|YP_080543.1| FeS assembly protein SufB [Bacillus licheniformis ATCC 14580]
gi|52787139|ref|YP_092968.1| YurU [Bacillus licheniformis ATCC 14580]
gi|319647669|ref|ZP_08001887.1| ABC transporter-associated protein [Bacillus sp. BT1B_CT2]
gi|52004963|gb|AAU24905.1| FeS assembly protein SufB [Bacillus licheniformis ATCC 14580]
gi|52349641|gb|AAU42275.1| YurU [Bacillus licheniformis ATCC 14580]
gi|317390010|gb|EFV70819.1| ABC transporter-associated protein [Bacillus sp. BT1B_CT2]
Length = 465
Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 201/476 (42%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +YKYGF + ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 DIGEYKYGFADKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLNSLNFDEITYYVKPSERSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLESQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKGGYCRYTTIQNWA-------NNVFNLVTKRAVC-EENATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|251781773|ref|YP_002996075.1| hypothetical protein SDEG_0353 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390402|dbj|BAH80861.1| hypothetical protein SDEG_0353 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323126579|gb|ADX23876.1| Iron-sulfur cluster assembly protein SufB [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 472
Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 208/490 (42%), Positives = 296/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ + ID+ Y++GF +++ + KGL+E ++R +SA KNEP+WMLE+RL
Sbjct: 1 MSDINEKVE-PQPIDLGDYQFGFHDDVEPIYSTGKGLSEAVVRELSAAKNEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W I+FDD+ YY +S DDV ++ T+E++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPDKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K+E +K G+IF A+ E+PDL K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKDEFEKLGIIFTDTDSALKEYPDLFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 RALAD-ATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|308177664|ref|YP_003917070.1| FeS assembly protein SufB [Arthrobacter arilaitensis Re117]
gi|307745127|emb|CBT76099.1| FeS assembly protein SufB [Arthrobacter arilaitensis Re117]
Length = 486
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 196/488 (40%), Positives = 297/488 (60%), Gaps = 18/488 (3%)
Query: 4 VRETVDKVRKI-DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ E ++K ++ + Y+YG+ N A +G+++D++ ISA K+EP+WMLE R A
Sbjct: 15 ISEILEKNPELHGIGNYEYGWSDKNDAGANARRGVDKDVVAIISALKSEPEWMLERRQKA 74
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+W IDFD++ Y+ + D++ ++ TY+KLGIP E
Sbjct: 75 LKYFDRKPMPTWGP-DLSGIDFDNIKYFVRSTEKQA-TTWDELPEDIKNTYDKLGIPEAE 132
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S V +E+L+ GVIF+ + EHP++ ++Y +V+
Sbjct: 133 KQRLV------SGVAAQYESEVVYHQLREDLEAQGVIFLDTDTGLKEHPEIFQEYFGSVI 186
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P GDN +A+LN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE SYV
Sbjct: 187 PAGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYV 246
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR C
Sbjct: 247 HYIEGCTAPIYQSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKRAVC 299
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A N
Sbjct: 300 -EEGATMEWVDGNIGSKVTMKYPAVYLVGEHAKGETLSIAFAGEGQHQDTGSKMVHIAPN 358
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K ++ + YRG V V GA ++N CD+LL+ + T PYI+ +
Sbjct: 359 TSSAIVAKSVARNGGRSAYRGLVQVQEGAKGTKNSVVCDALLVDQISRSDTYPYIDVRED 418
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ HEAT S++S+E LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI+
Sbjct: 419 DVTMGHEATVSRVSEEQLFYLMSRGMAEDEAMAMIVRGFVEPIARELPMEYALELNRLIE 478
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 479 LQMEGSVG 486
>gi|238749444|ref|ZP_04610949.1| hypothetical protein yrohd0001_27610 [Yersinia rohdei ATCC 43380]
gi|238712099|gb|EEQ04312.1| hypothetical protein yrohd0001_27610 [Yersinia rohdei ATCC 43380]
Length = 508
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 290/511 (56%), Positives = 367/511 (71%), Gaps = 36/511 (7%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D V+ + +YK GF T + D+ KG+NED+IR ISAK+NEP+WMLE+RL AYR
Sbjct: 7 EVPDDVQAWVSEGRYKEGFFTQLATDELAKGINEDVIRAISAKRNEPEWMLEFRLGAYRS 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------------- 105
WL M++P W + Y ++D+ D YY+AP S D
Sbjct: 67 WLQMEEPHWLKAHYKSLDYQDYSYYSAPSCGSCDDSCDSQPGAVQQSSADGTTSQDMSQH 126
Query: 106 -------PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E+ + +LG+P+RE ++VAVDA+FDSVSV TT++ +L + G+I
Sbjct: 127 NINEYLTAEVESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYRGKLAEQGII 178
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
F EAI E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYF
Sbjct: 179 FCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYF 238
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
RIN TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQ
Sbjct: 239 RINAAKTGQFERTILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKYSTVQ 298
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
NW+ G GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+
Sbjct: 299 NWFAGA-DSTGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFF 357
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
S+A++NG QQ D+GTKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQ
Sbjct: 358 SVALTNGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQ 417
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
CDS+LIG + GAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVN
Sbjct: 418 CDSMLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVN 477
Query: 459 GFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
GF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 478 GFCKDVFSELPLEFAVEAQKLLAISLEHSVG 508
>gi|25010216|ref|NP_734611.1| hypothetical protein gbs0141 [Streptococcus agalactiae NEM316]
gi|23094568|emb|CAD45786.1| Unknown [Streptococcus agalactiae NEM316]
Length = 472
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 211/490 (43%), Positives = 297/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ + ID+ +YK+GF +++ + KGLNE +IR +SA K EP+WML++RL
Sbjct: 1 MSEINEKVE-PQPIDLGEYKFGFHDDVKPIYSTGKGLNEAVIRELSAAKGEPEWMLDFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W IDFDD+ YY + DDV ++ T+E++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDIDFDDIIYYQKASDKPA-RDWDDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G++F A+ E+P+L KKY +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPELFKKYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ T KYPS L GE +CG SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KDATVEWIDGNLGAKTTMKYPSVYLDGEGACGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|123442432|ref|YP_001006411.1| cysteine desulfurase activator complex subunit SufB [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089393|emb|CAL12241.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 503
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 288/506 (56%), Positives = 368/506 (72%), Gaps = 31/506 (6%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D V+ + +YK GF T + D+ KG+NED+IR ISAK+NEP+WMLE+RL AYR
Sbjct: 7 EVPDDVQAWVSDGRYKEGFFTQLATDELAKGINEDVIRAISAKRNEPEWMLEFRLGAYRS 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL---------------------DD 103
WL M++P W + Y ++D+ D YY+AP + +
Sbjct: 67 WLEMEEPHWLKAHYKSLDYQDYSYYSAPSCGSCDDNCGSQSGALQQSSAEDSAAHTMNEY 126
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + +LG+P+RE ++VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 127 LTAEVESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFG 178
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN
Sbjct: 179 EAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAA 238
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G
Sbjct: 239 KTGQFERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAG 298
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++
Sbjct: 299 A-DSTGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALT 357
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
NG QQ D+GTKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+L
Sbjct: 358 NGHQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSML 417
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG + GAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++
Sbjct: 418 IGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKD 477
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 478 VFSELPLEFAVEAQKLLAISLEHSVG 503
>gi|87311560|ref|ZP_01093678.1| hypothetical protein DSM3645_24772 [Blastopirellula marina DSM
3645]
gi|87285682|gb|EAQ77598.1| hypothetical protein DSM3645_24772 [Blastopirellula marina DSM
3645]
Length = 471
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 203/489 (41%), Positives = 285/489 (58%), Gaps = 19/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+A T D + + KY F T + KA KG++ +++ IS KNEPDWM ++RL
Sbjct: 1 MATDITTDALESPVGEINKYDFRTETTGIFKARKGVDAEVVNQISDIKNEPDWMRKFRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+ + + P W AIDF D++YY P G DDV E+ T+E+LGIP
Sbjct: 61 SLEIFNSKPMPKWGG-DI-AIDFQDIFYYLKPTDGQGHT-WDDVPAEIKDTFERLGIPEA 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L+G V A F+S V + +E+L K GV+F A+ EHP+L+++Y V
Sbjct: 118 ERKYLSG-------VKAQFESEVVYGSLQEDLAKKGVLFTDTDTAVREHPELLREYFGKV 170
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+ DN +AALNSAV++ GSF+YIPKGV+ L YFRIN + GQFERTLII DEG+
Sbjct: 171 IAPDDNKFAALNSAVWSGGSFIYIPKGVKIDFPLQAYFRINAESMGQFERTLIIVDEGAQ 230
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP LH+AVVE++ + +YST+QNW IYN VTKR
Sbjct: 231 VHYVEGCTAPMYTTESLHSAVVEVICKKGSRCRYSTIQNWA-------NNIYNLVTKRAL 283
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W GS +T KYP+ + + GE SIA S Q D+G K++H A
Sbjct: 284 AY-RDATMEWVDGNLGSHLTMKYPAVYMMEPGARGEILSIAFSGKGQHQDTGAKLVHCAP 342
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTT +IVSK IS +YRG V V GA S++ CD+L++ + T PYIE
Sbjct: 343 NTTGQIVSKSISKDGGRGSYRGLVKVEEGATGSKSSVVCDALILDPQSRSDTYPYIEIAE 402
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ HEA+ S+I +E LFY + RG+ E A +IVNGF+ ++++LPME+AVE +LI
Sbjct: 403 PDVSIGHEASVSRIGEEQLFYLMSRGLSESEASTMIVNGFIEPLVKELPMEYAVELNRLI 462
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 463 ELQMEGSVG 471
>gi|228474288|ref|ZP_04059023.1| FeS assembly protein SufB [Staphylococcus hominis SK119]
gi|314936858|ref|ZP_07844205.1| FeS assembly protein SufB [Staphylococcus hominis subsp. hominis
C80]
gi|228271647|gb|EEK12994.1| FeS assembly protein SufB [Staphylococcus hominis SK119]
gi|313655477|gb|EFS19222.1| FeS assembly protein SufB [Staphylococcus hominis subsp. hominis
C80]
Length = 465
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+R IS K EP+WML +RL A + + + P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVREISKMKEEPEWMLNFRLKALKLFYKIPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ DL K+Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEDLFKEYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|294501704|ref|YP_003565404.1| FeS assembly protein SufB [Bacillus megaterium QM B1551]
gi|295707051|ref|YP_003600126.1| FeS assembly protein SufB [Bacillus megaterium DSM 319]
gi|294351641|gb|ADE71970.1| FeS assembly protein SufB [Bacillus megaterium QM B1551]
gi|294804710|gb|ADF41776.1| FeS assembly protein SufB [Bacillus megaterium DSM 319]
Length = 465
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 EIGDYKYGFSDKDVSIFRSKRGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++DFD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DMASLDFDEITYYVKPSEKSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L+ G++F A+ E+ D+ +++ V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEAQGIVFKDTDTALKENEDIFREHFGKVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADEGS+V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIADEGSHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVCEA-NATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARANIECDTLIMDNQSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|329726815|gb|EGG63275.1| FeS assembly protein SufB [Staphylococcus epidermidis VCU144]
Length = 465
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 207/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+ IS K EP WML++RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVTEISKMKEEPQWMLDFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L ++Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEELFREYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA ++ Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFASKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EG++G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGAIG 465
>gi|293396327|ref|ZP_06640605.1| FeS assembly protein SufB [Serratia odorifera DSM 4582]
gi|291421116|gb|EFE94367.1| FeS assembly protein SufB [Serratia odorifera DSM 4582]
Length = 499
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 286/493 (58%), Positives = 365/493 (74%), Gaps = 26/493 (5%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + D+ G+NE+++R ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSEGRYKEGFFTQVATDELATGINEEVVRAISAKRNEPEWMLEFRLEAYRAWLQMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSL-----------------DDVDPELLRTYEKLG 116
+ Y +++ D YY+AP + + E+ + +LG
Sbjct: 76 LKANYDRLNYQDYSYYSAPSCGSCDDACGSQPGAEQQPGAQLAENSYLTSEVELAFNQLG 135
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+P+RE S+VAVDA+FDSVSV TT++E+L +SGVIF EAI E+PDLV+KY
Sbjct: 136 VPVRE--------GSEVAVDAIFDSVSVATTYREKLAESGVIFCSFGEAIQEYPDLVRKY 187
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IAD
Sbjct: 188 LGRVVPSNDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIAD 247
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G KGGI NFVT
Sbjct: 248 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQNWFSGG-DSKGGILNFVT 306
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A+++G QQ D+GTKM+
Sbjct: 307 KRALCEGANSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTSGHQQADTGTKMI 366
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT PY+
Sbjct: 367 HIGKNTKSTIIAKGISAGHSENTYRGLVKILPGAENARNFTQCDSMLIGPDSGAHTFPYV 426
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E++N+S LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEA
Sbjct: 427 EARNNSAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEA 486
Query: 477 QKLIDISLEGSVG 489
QKL+ ISLE SVG
Sbjct: 487 QKLLAISLEHSVG 499
>gi|242373064|ref|ZP_04818638.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
gi|242349218|gb|EES40819.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
Length = 465
Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats.
Identities = 207/476 (43%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF ++ + ++ +GL E+I+ IS K EP WML +RL A + + M P W
Sbjct: 7 DVGDYKYGFHDEDVSIFRSERGLTENIVTEISKMKEEPQWMLNFRLKALKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKPSEHTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L ++Y ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALRENEELFREYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVH-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|304414757|ref|ZP_07395739.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Regiella insecticola LSR1]
gi|304283155|gb|EFL91567.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Regiella insecticola LSR1]
Length = 499
Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats.
Identities = 291/507 (57%), Positives = 367/507 (72%), Gaps = 30/507 (5%)
Query: 4 VRETVDKVRKID----VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ V+ I ++YK GF T + D+ KGLNED+IR ISAK+NEP+WML +RL
Sbjct: 2 TQSNVETSENISAWVKEERYKEGFFTQLATDELGKGLNEDVIRAISAKRNEPEWMLTFRL 61
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD---------------- 103
AYR WLTM++P W + Y +D+ D YY+AP ++ D+
Sbjct: 62 EAYRGWLTMEEPHWLKAHYKKLDYQDYSYYSAPSCNHCDENGDNQSEKKSSSTDETTTNL 121
Query: 104 -VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+ E+ + +LG+P+RE +VAVDA+FDSVSV TT++++L G+IF +
Sbjct: 122 YLTAEVESAFAQLGVPVRE--------GVEVAVDAIFDSVSVATTYRKKLATQGIIFCSL 173
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
EAI EHP+LV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN
Sbjct: 174 GEAIQEHPELVQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINA 233
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
TGQFERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+
Sbjct: 234 AKTGQFERTILIADEDSYVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKYSTVQNWFA 293
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
G GGI NFVTKR C+G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A+
Sbjct: 294 GSETE-GGILNFVTKRALCQGAGSKMSWTQSETGSAITWKYPSVILQGDHSIGEFFSVAL 352
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+NG QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + GA ++RNFTQCDS+
Sbjct: 353 TNGKQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKILPGADNARNFTQCDSM 412
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LIG N AHT PY+E KN S LEHEATTSKI D+ LFYC QRGI E+ AI++IVNGF +
Sbjct: 413 LIGANSAAHTFPYVEVKNHSAQLEHEATTSKIGDDQLFYCRQRGISEDDAISMIVNGFCK 472
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSVG 489
+V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 473 DVFSELPLEFAVEAQKLLAISLEHSVG 499
>gi|82750528|ref|YP_416269.1| hypothetical protein SAB0778 [Staphylococcus aureus RF122]
gi|123548814|sp|Q2YWN2|Y778_STAAB RecName: Full=UPF0051 protein SAB0778
gi|82656059|emb|CAI80466.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 465
Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 7 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-NLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +E S+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEDSIG 465
>gi|227503594|ref|ZP_03933643.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Corynebacterium accolens
ATCC 49725]
gi|227075630|gb|EEI13593.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Corynebacterium accolens
ATCC 49725]
Length = 479
Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats.
Identities = 200/489 (40%), Positives = 288/489 (58%), Gaps = 18/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ T D++ + Y+YG+ + A +GLNED++R ISAKK EP+WML RL
Sbjct: 8 PDNKMTDDEIID-SIGAYEYGWHDSDSAGASAARGLNEDVVRDISAKKGEPEWMLNQRLK 66
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + P+W IDFD + YY Q+ DD+ ++ TY+KLGIP
Sbjct: 67 ALNIFDKKPIPTWG-ADLSGIDFDQIKYYVKSTEEQA-QTWDDLPDDIKATYDKLGIPEA 124
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V +E+L+ GVIF+ A+ ++P+L K++ TV
Sbjct: 125 EKQRLV------AGVAAQYESEVVYHQIREDLESQGVIFVDTDTALRDYPELFKEHFGTV 178
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN ++ALNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +Y
Sbjct: 179 IPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY 238
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 239 VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SSNVYNLVTKRTK 291
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ W GS +T KYP+ + G + GE S+A + Q D+G KM H+A
Sbjct: 292 V-EEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAP 350
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
T+S IVSK ++ YRG V V++ A HS + +CD+LL+ N + T PY + +N
Sbjct: 351 YTSSNIVSKSVARAGGRAAYRGLVQVNQNAHHSTSNVECDALLVDNISRSDTYPYNDIRN 410
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
L HEAT S++S+E LFY + RGI EE A+A+IV GFV + ++LPME+A+E +LI
Sbjct: 411 EYVTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALELNRLI 470
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 471 ELQMEGSVG 479
>gi|168484753|ref|ZP_02709698.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1873-00]
gi|172042060|gb|EDT50106.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1873-00]
gi|332204027|gb|EGJ18094.1| feS assembly protein SufB [Streptococcus pneumoniae GA47368]
Length = 470
Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats.
Identities = 212/487 (43%), Positives = 296/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKDGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|331266210|ref|YP_004325840.1| FeS assembly protein SufB [Streptococcus oralis Uo5]
gi|326682882|emb|CBZ00499.1| FeS assembly protein SufB [Streptococcus oralis Uo5]
Length = 470
Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|15902819|ref|NP_358369.1| hypothetical protein spr0775 [Streptococcus pneumoniae R6]
gi|116515674|ref|YP_816253.1| FeS assembly protein SufB [Streptococcus pneumoniae D39]
gi|148984604|ref|ZP_01817872.1| FeS assembly protein SufB [Streptococcus pneumoniae SP3-BS71]
gi|148988290|ref|ZP_01819737.1| FeS assembly protein SufB [Streptococcus pneumoniae SP6-BS73]
gi|148997050|ref|ZP_01824704.1| FeS assembly protein SufB [Streptococcus pneumoniae SP11-BS70]
gi|149010496|ref|ZP_01831867.1| FeS assembly protein SufB [Streptococcus pneumoniae SP19-BS75]
gi|149026352|ref|ZP_01836507.1| FeS assembly protein SufB [Streptococcus pneumoniae SP23-BS72]
gi|168485818|ref|ZP_02710326.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1087-00]
gi|168490306|ref|ZP_02714505.1| FeS assembly protein SufB [Streptococcus pneumoniae SP195]
gi|168575529|ref|ZP_02721465.1| FeS assembly protein SufB [Streptococcus pneumoniae MLV-016]
gi|169833997|ref|YP_001694323.1| FeS assembly protein SufB [Streptococcus pneumoniae Hungary19A-6]
gi|182683786|ref|YP_001835533.1| FeS assembly protein SufB [Streptococcus pneumoniae CGSP14]
gi|194397395|ref|YP_002037507.1| FeS assembly protein SufB [Streptococcus pneumoniae G54]
gi|225858671|ref|YP_002740181.1| FeS assembly protein SufB [Streptococcus pneumoniae 70585]
gi|237650839|ref|ZP_04525091.1| FeS assembly protein SufB [Streptococcus pneumoniae CCRI 1974]
gi|237822665|ref|ZP_04598510.1| FeS assembly protein SufB [Streptococcus pneumoniae CCRI 1974M2]
gi|303255292|ref|ZP_07341363.1| FeS assembly protein SufB [Streptococcus pneumoniae BS455]
gi|303260390|ref|ZP_07346359.1| FeS assembly protein SufB [Streptococcus pneumoniae SP-BS293]
gi|303262747|ref|ZP_07348685.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS292]
gi|303265036|ref|ZP_07350950.1| FeS assembly protein SufB [Streptococcus pneumoniae BS397]
gi|303267134|ref|ZP_07353003.1| FeS assembly protein SufB [Streptococcus pneumoniae BS457]
gi|303269370|ref|ZP_07355141.1| FeS assembly protein SufB [Streptococcus pneumoniae BS458]
gi|307067469|ref|YP_003876435.1| Fe-S cluster assemble ABC transporter permease [Streptococcus
pneumoniae AP200]
gi|15458371|gb|AAK99579.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076250|gb|ABJ53970.1| FeS assembly protein SufB [Streptococcus pneumoniae D39]
gi|147756750|gb|EDK63790.1| FeS assembly protein SufB [Streptococcus pneumoniae SP11-BS70]
gi|147764977|gb|EDK71906.1| FeS assembly protein SufB [Streptococcus pneumoniae SP19-BS75]
gi|147922995|gb|EDK74110.1| FeS assembly protein SufB [Streptococcus pneumoniae SP3-BS71]
gi|147925971|gb|EDK77045.1| FeS assembly protein SufB [Streptococcus pneumoniae SP6-BS73]
gi|147929314|gb|EDK80313.1| FeS assembly protein SufB [Streptococcus pneumoniae SP23-BS72]
gi|168996499|gb|ACA37111.1| FeS assembly protein SufB [Streptococcus pneumoniae Hungary19A-6]
gi|182629120|gb|ACB90068.1| FeS assembly protein SufB [Streptococcus pneumoniae CGSP14]
gi|183571073|gb|EDT91601.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC1087-00]
gi|183571368|gb|EDT91896.1| FeS assembly protein SufB [Streptococcus pneumoniae SP195]
gi|183578484|gb|EDT99012.1| FeS assembly protein SufB [Streptococcus pneumoniae MLV-016]
gi|194357062|gb|ACF55510.1| FeS assembly protein SufB [Streptococcus pneumoniae G54]
gi|225720607|gb|ACO16461.1| FeS assembly protein SufB [Streptococcus pneumoniae 70585]
gi|301794005|emb|CBW36403.1| FeS assembly protein SufB [Streptococcus pneumoniae INV104]
gi|301799863|emb|CBW32438.1| FeS assembly protein SufB [Streptococcus pneumoniae OXC141]
gi|301801695|emb|CBW34401.1| FeS assembly protein SufB [Streptococcus pneumoniae INV200]
gi|302597761|gb|EFL64836.1| FeS assembly protein SufB [Streptococcus pneumoniae BS455]
gi|302636069|gb|EFL66566.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS292]
gi|302638425|gb|EFL68891.1| FeS assembly protein SufB [Streptococcus pneumoniae SP-BS293]
gi|302641088|gb|EFL71464.1| FeS assembly protein SufB [Streptococcus pneumoniae BS458]
gi|302643342|gb|EFL73620.1| FeS assembly protein SufB [Streptococcus pneumoniae BS457]
gi|302645396|gb|EFL75629.1| FeS assembly protein SufB [Streptococcus pneumoniae BS397]
gi|306409006|gb|ADM84433.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus pneumoniae AP200]
gi|327390224|gb|EGE88567.1| feS assembly protein SufB [Streptococcus pneumoniae GA04375]
gi|332073202|gb|EGI83681.1| feS assembly protein SufB [Streptococcus pneumoniae GA17570]
gi|332076151|gb|EGI86617.1| feS assembly protein SufB [Streptococcus pneumoniae GA41301]
gi|332202727|gb|EGJ16796.1| feS assembly protein SufB [Streptococcus pneumoniae GA41317]
gi|332204875|gb|EGJ18940.1| feS assembly protein SufB [Streptococcus pneumoniae GA47901]
Length = 470
Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|296122637|ref|YP_003630415.1| FeS assembly protein SufB [Planctomyces limnophilus DSM 3776]
gi|296014977|gb|ADG68216.1| FeS assembly protein SufB [Planctomyces limnophilus DSM 3776]
Length = 473
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 202/480 (42%), Positives = 291/480 (60%), Gaps = 19/480 (3%)
Query: 12 RKIDVDQYKYGFE--TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ + +Y+YGF T+ K+ KGL+ +I+ ISA K EP WM ++RL AY +L+
Sbjct: 11 DDLGIGEYQYGFHDSTDNYTFKSRKGLDREIVEQISAMKKEPAWMRDFRLEAYDIFLSKP 70
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
P+W ++F D++YY QS DDV ++ +TY++LGIP E++ LAG
Sbjct: 71 MPTWGG-DLSHLNFQDIHYYMKASDRQE-QSWDDVPDDIRKTYDRLGIPEAEKKYLAG-- 126
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
V A ++S V + +E+L K GV+F AI ++P+LV+++ TV+P DN +A
Sbjct: 127 -----VKAQYESEVVYGSLQEDLAKKGVVFTDTDSAIRDYPELVREHFGTVIPSFDNKFA 181
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALNSAV++ GSF+Y+PKGV L YFRIN + GQFERTLII DEG+ V Y+EGCTA
Sbjct: 182 ALNSAVWSGGSFIYVPKGVEIEFPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTA 241
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P LH+AVVE++ NA +Y+T+QNW +YN VTKR G + +
Sbjct: 242 PTYSSESLHSAVVEIIVKRNARCRYTTIQNW-------SNNVYNLVTKRAMAYG-NALME 293
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS +T KYP+ L + GE SIA + Q D+G KM+H A NT+SRIVSK
Sbjct: 294 WVDGNLGSQLTMKYPAIYLMEPGARGETLSIAFAGKGQHQDAGAKMVHCAPNTSSRIVSK 353
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
IS +YRG V V A + ++ CD+L++ + + T PYIE + +EHEA
Sbjct: 354 SISKAGGRASYRGLVKVEPHATNCKSNVVCDALILDADSRSDTYPYIEIEQEHVAIEHEA 413
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ SKI++E L Y + RG+ E A A+IV GF+ ++++LPME+AVE +LI++ +EGSVG
Sbjct: 414 SVSKIAEEQLLYLMSRGLTEAEASAMIVTGFIEPLVKELPMEYAVEMNRLIELQMEGSVG 473
>gi|329116635|ref|ZP_08245352.1| FeS assembly protein SufB [Streptococcus parauberis NCFD 2020]
gi|326907040|gb|EGE53954.1| FeS assembly protein SufB [Streptococcus parauberis NCFD 2020]
Length = 472
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 204/490 (41%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E ++ + ID+ Y++GF + + + KGL+E ++R +S K+EP+WML++RL
Sbjct: 1 MSEINEKIE-PKPIDLGDYQFGFHDDFEPIYSTGKGLSEAVVRELSKAKDEPEWMLDFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W I+FDD+ YY +S DDV ++ T+EK+GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPEKIKDTFEKIGIPQ 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K+E K G++F A+ E+PDL K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKDEYDKLGIVFTDTDTALKEYPDLFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIYALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 KAQ-KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTILMDDLSKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSENEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|226306542|ref|YP_002766502.1| iron-sulfur cluster assembly protein SufB [Rhodococcus erythropolis
PR4]
gi|229493463|ref|ZP_04387248.1| FeS assembly protein SufB [Rhodococcus erythropolis SK121]
gi|226185659|dbj|BAH33763.1| putative iron-sulfur cluster assembly protein SufB [Rhodococcus
erythropolis PR4]
gi|229319424|gb|EEN85260.1| FeS assembly protein SufB [Rhodococcus erythropolis SK121]
Length = 486
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 192/475 (40%), Positives = 288/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ + A +GL+E ++R ISAKK+EP+WML+ RL A R + P+W
Sbjct: 28 LGHYGYGWSDSDEAGASAQRGLSEAVVRDISAKKSEPEWMLDIRLKALRTFDKKPMPNWG 87
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
I FD++ Y+ +S +D+ ++ TY+KLGIP E++ L
Sbjct: 88 S-DLEGIHFDNIKYFVRSSEKQA-ESWEDLPEDIKNTYDKLGIPEAEKQRLV------AG 139
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V + +E+L++ GVIF+ + +HP+L K+Y +V+P GDN ++ALN+A
Sbjct: 140 VAAQYESEVVYHSIREDLEEQGVIFLDTDTGLKQHPELFKEYFGSVIPAGDNKFSALNTA 199
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 200 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEDASVHYVEGCTAPIYKS 259
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR S + W
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNW-------SNNVYNLVTKRTKVEAGGS-MEWVDGN 311
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE S+A S Q D+G KMLHLA +T+S I+SK ++ G
Sbjct: 312 IGSKVTMKYPAVWLMGEYARGEVLSVAFSGEGQHQDTGAKMLHLAPHTSSTIISKSVARG 371
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V++GA S++ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 372 GGRASYRGLVQVNKGAHGSKSTVKCDALLVDQISRSDTYPYVDIREDDVTMGHEATVSKV 431
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 432 SDDQLFYLMSRGLTEDEAMATIVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 486
>gi|90407344|ref|ZP_01215529.1| hypothetical protein PCNPT3_03882 [Psychromonas sp. CNPT3]
gi|90311495|gb|EAS39595.1| hypothetical protein PCNPT3_03882 [Psychromonas sp. CNPT3]
Length = 486
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 279/487 (57%), Positives = 358/487 (73%), Gaps = 13/487 (2%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
D +D + YK GF T + D KGLNE ++R ISAK+NEP WML++RL A+ WL
Sbjct: 9 QKDIQDWVDDESYKPGFFTKVDSDSLQKGLNEQVVRAISAKRNEPQWMLDFRLKAFEIWL 68
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVG----PQSLDDVDPELLRTYEKLGIPIREQ 122
+M++P W + Y +D+ YY+AP G + + ++ E+ +E+LG+P+ E+
Sbjct: 69 SMEEPHWLKGEYKPLDYQQYSYYSAPNGNAGGCCDDSASEFLNKEVEDAFEQLGVPMSER 128
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ +A VDA+FDSVSV TTF ++L K G+IF +EAI +HP LV++YL +VVP
Sbjct: 129 DNIA--------VDAIFDSVSVKTTFSDKLAKKGIIFCSFNEAIHQHPQLVQQYLGSVVP 180
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DNF+AALN+AV +DG+FVYIPKGV CPMELSTYFRIN TGQFERT++IADEGSYVS
Sbjct: 181 PSDNFFAALNAAVASDGTFVYIPKGVHCPMELSTYFRINSAQTGQFERTILIADEGSYVS 240
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGC+AP D QLHAAVVE++ L +A++KYSTVQNW+ G +GGI NFVTKR C
Sbjct: 241 YIEGCSAPSHDTYQLHAAVVEVIILKDAQVKYSTVQNWFAG-KDSQGGILNFVTKRAICE 299
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G SK+SWTQ ETGSAITWKYPS +L+G+ S EFYSIA+++G Q D+GTKM+H+ KNT
Sbjct: 300 GSGSKMSWTQSETGSAITWKYPSIILKGDNSIAEFYSIALTSGKQMADTGTKMIHIGKNT 359
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I++KGISAG S N YRG V + A ++RNFTQCDS+LIG +C AHT PYIE NSS
Sbjct: 360 RSTIIAKGISAGESENVYRGLVKILPSAVNARNFTQCDSMLIGTHCAAHTFPYIEVGNSS 419
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEATTSKI ++ LFYC QRGI EE AI++IVNGF ++V KLP+EFAVEA+KL+ I
Sbjct: 420 SQIEHEATTSKIGEDQLFYCAQRGITEEDAISMIVNGFCKDVFSKLPLEFAVEAKKLLAI 479
Query: 483 SLEGSVG 489
SLE SVG
Sbjct: 480 SLEHSVG 486
>gi|270292584|ref|ZP_06198795.1| FeS assembly protein SufB [Streptococcus sp. M143]
gi|270278563|gb|EFA24409.1| FeS assembly protein SufB [Streptococcus sp. M143]
Length = 470
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANVGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|306829654|ref|ZP_07462844.1| FeS assembly protein SufB [Streptococcus mitis ATCC 6249]
gi|304428740|gb|EFM31830.1| FeS assembly protein SufB [Streptococcus mitis ATCC 6249]
Length = 470
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKG++ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGIKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSETEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|205375194|ref|ZP_03227985.1| YurU [Bacillus coahuilensis m4-4]
Length = 467
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 199/476 (41%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ + ++ +GL +I+ IS K EP WML++RL + + M P W
Sbjct: 9 EIGDYKYGFSDRDVSIFRSERGLTREIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 69 GG-DLNSLNFDEITYYVKPSEKSE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 120
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L++ G++F A+ E+ +L +++ + V+P DN ++ALNS
Sbjct: 121 -VSAQYESEVVYHNMQEDLEEMGIVFKDTDSALKENEELFREHWAKVIPPTDNKFSALNS 179
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 180 AVWSGGSFIYVPKGIKVETPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 239
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 240 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVYNLVTKRAVC-EENATMEWIDG 291
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 292 NIGSKLTMKYPAVVLKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 351
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 352 QGGKVTYRGIVHFGRKADGARSNIECDTLIMDNQSTSDTIPYNEILNDNISLEHEAKVSK 411
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 412 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 467
>gi|168240879|ref|ZP_02665811.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194448024|ref|YP_002045375.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194406328|gb|ACF66547.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339115|gb|EDZ25879.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 495
Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LEHEATTS+I ++ LFY LQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYSLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|222150796|ref|YP_002559949.1| FeS assembly protein SufB [Macrococcus caseolyticus JCSC5402]
gi|222119918|dbj|BAH17253.1| FeS assembly protein SufB [Macrococcus caseolyticus JCSC5402]
Length = 465
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+V YKYGF ++ + ++ +GL EDI+R IS K EP WML++RL + +++ M P+W
Sbjct: 7 EVGDYKYGFHDKDVSIFRSERGLTEDIVREISKMKEEPQWMLDFRLKSLKQFYKMPMPTW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDEITYYVKPSEHTE-RSWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L++ G+IF A+ E+ D+ K++ ++V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMQEDLEEQGIIFKDTDSALRENEDIFKEHFASVIPPADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK V+ L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNVKLETPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW ++N VTKR + W
Sbjct: 238 TNSLHSAVVEIIVKKDAYCRYTTIQNWA-------NNVFNLVTKRTFVY-ENGTMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C L GE + G SIA++ Q D+G KM+H+A NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPACYLLGEGARGMTLSIALAGKGQVQDAGAKMMHMAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVVYRGIVHFGRKATGARSNIECDTLIMDNESTSDTIPYNEMLNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|306825071|ref|ZP_07458413.1| FeS assembly protein SufB [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432507|gb|EFM35481.1| FeS assembly protein SufB [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 470
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKP-VRSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAL 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|225861236|ref|YP_002742745.1| FeS assembly protein SufB [Streptococcus pneumoniae Taiwan19F-14]
gi|298229165|ref|ZP_06962846.1| FeS assembly protein SufB [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255727|ref|ZP_06979313.1| FeS assembly protein SufB [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503123|ref|YP_003725063.1| ABC superfamily transporter membrane protein [Streptococcus
pneumoniae TCH8431/19A]
gi|225727181|gb|ACO23032.1| FeS assembly protein SufB [Streptococcus pneumoniae Taiwan19F-14]
gi|298238718|gb|ADI69849.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pneumoniae TCH8431/19A]
Length = 470
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAVKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|168490960|ref|ZP_02715103.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC0288-04]
gi|225854379|ref|YP_002735891.1| FeS assembly protein SufB [Streptococcus pneumoniae JJA]
gi|225856537|ref|YP_002738048.1| FeS assembly protein SufB [Streptococcus pneumoniae P1031]
gi|307127578|ref|YP_003879609.1| FeS assembly protein SufB [Streptococcus pneumoniae 670-6B]
gi|183574570|gb|EDT95098.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC0288-04]
gi|225723562|gb|ACO19415.1| FeS assembly protein SufB [Streptococcus pneumoniae JJA]
gi|225725970|gb|ACO21822.1| FeS assembly protein SufB [Streptococcus pneumoniae P1031]
gi|306484640|gb|ADM91509.1| FeS assembly protein SufB [Streptococcus pneumoniae 670-6B]
gi|332077284|gb|EGI87746.1| feS assembly protein SufB [Streptococcus pneumoniae GA17545]
Length = 470
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 212/487 (43%), Positives = 296/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL +Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFNQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|292488153|ref|YP_003531034.1| FeS assembly protein SufB [Erwinia amylovora CFBP1430]
gi|292899363|ref|YP_003538732.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Erwinia amylovora ATCC 49946]
gi|291199211|emb|CBJ46326.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Erwinia amylovora ATCC 49946]
gi|291553581|emb|CBA20626.1| FeS assembly protein SufB [Erwinia amylovora CFBP1430]
Length = 497
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 289/506 (57%), Positives = 367/506 (72%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVR--KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + D V+ + +YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTDASDDVQVWEGSHQKYKEGFFTQLQTEEFEHGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL---------------DD 103
L A+ WL M++P W + Y +D+ D YY+AP S D
Sbjct: 61 LKAFAAWLEMEEPHWLKANYKQLDYQDYSYYSAPSCGSCDDSCASEPGATQASGGSAPDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ +++LG+P+RE +VAVDA+FDSVSV TT++++L K G+IF
Sbjct: 121 LTREVEEAFKQLGVPVRE--------GQEVAVDAIFDSVSVSTTYRDKLAKEGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI E+P+LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIHEYPELVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G
Sbjct: 233 KTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFSG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A++
Sbjct: 293 GDSE-GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSIGEFFSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG CGAHT PY+E +N + LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++
Sbjct: 412 IGAECGAHTFPYVEVRNHTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|322390981|ref|ZP_08064487.1| FeS assembly protein SufB [Streptococcus parasanguinis ATCC 903]
gi|321142356|gb|EFX37828.1| FeS assembly protein SufB [Streptococcus parasanguinis ATCC 903]
Length = 470
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 299/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF ++Q + KGLNE +IR +SA KNEP+WMLE+RL ++
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVQPILSTGKGLNEAVIRELSAAKNEPEWMLEFRLKSF 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|239978828|ref|ZP_04701352.1| hypothetical protein SalbJ_05305 [Streptomyces albus J1074]
gi|291450711|ref|ZP_06590101.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
gi|291353660|gb|EFE80562.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
Length = 473
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 192/490 (39%), Positives = 291/490 (59%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y+YG+ + + +G+ ED++R IS+KK+EP+WM + RL
Sbjct: 1 MTLPTETA-HPELEGLGTYEYGWADSDAAGASARRGIGEDVVRDISSKKDEPEWMTKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLKLFGKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFQEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKTDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWIDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|317130123|ref|YP_004096405.1| FeS assembly protein SufB [Bacillus cellulosilyticus DSM 2522]
gi|315475071|gb|ADU31674.1| FeS assembly protein SufB [Bacillus cellulosilyticus DSM 2522]
Length = 465
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 196/476 (41%), Positives = 289/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF ++ + ++ KGL ++I+ IS K+EP WML++RL + ++ M P W
Sbjct: 7 EIGEYQYGFSDKDVSIFRSKKGLTKEIVEEISRMKDEPKWMLDFRLKSLEQFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKPSEKSE-RSWDEVPEEIKNTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V KE+L++ G++F A+ E+ + +++ TV+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMKEDLEEQGIVFKDTDTALKENEAVFREHFGTVIPPTDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLIIADE S V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW P ++N VTKR + + W
Sbjct: 238 TNSLHSAVVEIIVKKNAYCRYTTIQNWAP-------NVFNLVTKRAVA-EENATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +++G + G SIAI+ Q D+G KM HLA + +S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVMKGRGARGNVLSIAIAGKGQHQDAGAKMTHLAPDCSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG R + S+ +CD+L++ N + TIPY E N++ LEHEAT SK
Sbjct: 350 HGGKVTYRGICHFGRRSEGSKANIECDTLIMDNESTSDTIPYNEILNNNITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGVSEQEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|256391458|ref|YP_003113022.1| FeS assembly protein SufB [Catenulispora acidiphila DSM 44928]
gi|256357684|gb|ACU71181.1| FeS assembly protein SufB [Catenulispora acidiphila DSM 44928]
Length = 470
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 198/482 (41%), Positives = 298/482 (61%), Gaps = 19/482 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+++ + Y+YG+ + + +GLNED++R ISAKKNEP WML+ RL R +
Sbjct: 7 EQLEGL--GTYEYGWADSDAAGASARRGLNEDVVRDISAKKNEPQWMLDMRLRGLRLFEK 64
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P W IDFD++ Y+ +S DD+ ++ TY+KLGIP E++ L
Sbjct: 65 KPMPVWG-ADLGGIDFDNIKYFVRSTEKQA-ESWDDLPADIKNTYDKLGIPEAEKQRLI- 121
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V +EL++ GVIF+ A+ E+P+L +++ +TV+P GDN
Sbjct: 122 -----SGVAAQYESEVVYHQINKELEEQGVIFLDTDTALKEYPELFREHFATVIPTGDNK 176
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADE SYV Y+EGC
Sbjct: 177 FSALNTAVWSGGSFIYVPKGVHVQIPLQAYFRINTENMGQFERTLIIADEDSYVHYVEGC 236
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP + LH+AVVE+V NA ++Y+T+QNW +YN VTKR + +
Sbjct: 237 TAPIYSSDSLHSAVVEIVVKKNARVRYTTIQNW-------SNNVYNLVTKRAAAQA-GAT 288
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYP+ L GE + GE S+A + Q D+G KM+H A +T+S I+
Sbjct: 289 MEWIDGNIGSKVTMKYPAVWLLGEHAKGETLSVAFAGEGQHQDAGAKMVHAAPHTSSTII 348
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK ++ G +YRG V V GA HS++ +CD+LL+ + T PY++ + ++ H
Sbjct: 349 SKSVARGGGRTSYRGLVQVQEGAHHSKSTVKCDALLVDTVSRSDTYPYVDVREDDVSMGH 408
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT SK+S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EG+
Sbjct: 409 EATVSKVSEDQLFYLMSRGMTEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGA 468
Query: 488 VG 489
VG
Sbjct: 469 VG 470
>gi|302533781|ref|ZP_07286123.1| FeS assembly protein SufB [Streptomyces sp. C]
gi|302442676|gb|EFL14492.1| FeS assembly protein SufB [Streptomyces sp. C]
Length = 471
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 289/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ + A +GL+ED++R ISAKK+EP+WML RL + + P W
Sbjct: 13 LGTYEYGWADSDAAGAAAKRGLSEDVVRDISAKKSEPEWMLNLRLKGLKLFDKKPMPMWG 72
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +++ ++ TY+KLGIP E++ L
Sbjct: 73 S-DLSGIDFDNIKYFVRSTEKQAAS-WEELPEDIKNTYDKLGIPEAEKQRLV------AG 124
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y TV+PVGDN +A+LN+A
Sbjct: 125 VAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFQEYFGTVIPVGDNKFASLNTA 184
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 185 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYSS 244
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 245 DSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAVAY-EGATMEWIDGN 296
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A NT+S IVSK ++ G
Sbjct: 297 IGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHMAPNTSSNIVSKSVARG 356
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V + GAA S++ CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 357 GGRTSYRGLVEIGEGAAGSKSNVLCDALLVDTISRSDTYPYVDVREDDVTMGHEATVSKV 416
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY +QRG+ E A+A+IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 417 SDDQLFYLMQRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG 471
>gi|319945577|ref|ZP_08019829.1| FeS assembly protein SufB [Streptococcus australis ATCC 700641]
gi|319748176|gb|EFW00418.1| FeS assembly protein SufB [Streptococcus australis ATCC 700641]
Length = 470
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 214/487 (43%), Positives = 298/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF ++ + KGLNE +IR +SA KNEP+WMLE+RL +Y
Sbjct: 1 MTEERVEPKPIDLGEYKFGFHDDVDPILSTGKGLNESVIRELSAAKNEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 EAFKKMPMQTWG-ADLSDIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAT 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ +A S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKDSAKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|312172291|emb|CBX80548.1| FeS assembly protein SufB [Erwinia amylovora ATCC BAA-2158]
Length = 497
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 288/506 (56%), Positives = 367/506 (72%), Gaps = 26/506 (5%)
Query: 1 MVAVRETVDKVR--KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + + V+ + +YK GF T +Q ++ G+NED++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTDASEDVQVWEGSHQKYKEGFFTQLQTEEFEHGINEDVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL---------------DD 103
L A+ WL M++P W + Y +D+ D YY+AP S D
Sbjct: 61 LKAFAAWLEMEEPHWLKANYKQLDYQDYSYYSAPSCGSCDDSCASEPGATQASGGSAPDY 120
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ +++LG+P+RE +VAVDA+FDSVSV TT++++L K G+IF
Sbjct: 121 LTREVEEAFKQLGVPVRE--------GQEVAVDAIFDSVSVSTTYRDKLAKEGIIFCSFG 172
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI E+P+LVK+YL TVVP DNF+AALNSAV +DG+FVYIPKGVRCPMELSTYFRIN
Sbjct: 173 EAIHEYPELVKQYLGTVVPANDNFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAA 232
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G
Sbjct: 233 KTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQNWFSG 292
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A++
Sbjct: 293 GDSE-GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSVILRGDNSIGEFFSVALT 351
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 352 SGRQQADTGTKMIHIGKNTKSTIISKGISAGKSQNTYRGLVKIMPTATNARNFTQCDSML 411
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG CGAHT PY+E +N + LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++
Sbjct: 412 IGAECGAHTFPYVEVRNHTAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKD 471
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 VFSELPLEFAVEAQKLLAISLEHSVG 497
>gi|238787121|ref|ZP_04630921.1| hypothetical protein yfred0001_6070 [Yersinia frederiksenii ATCC
33641]
gi|238724909|gb|EEQ16549.1| hypothetical protein yfred0001_6070 [Yersinia frederiksenii ATCC
33641]
Length = 497
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 288/502 (57%), Positives = 363/502 (72%), Gaps = 35/502 (6%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + D+ KG+NED+IR ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 5 VSDGRYKEGFFTQLATDELAKGINEDVIRAISAKRNEPEWMLEFRLGAYRSWLQMEEPHW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD--------------------------PE 107
+ Y ++D+ D YY+AP + D E
Sbjct: 65 LKAHYKSLDYQDYSYYSAPSCGSCDDNCDSQPGAVQQSSADSTTSQDMSQHNINEYLTAE 124
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ + +LG+P+RE ++VAVDA+FDSVSV TT++ +L + G+IF EAI
Sbjct: 125 VESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQ 176
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQ
Sbjct: 177 EYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQ 236
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
FERT++IADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G
Sbjct: 237 FERTILIADEDSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGA-DS 295
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG Q
Sbjct: 296 TGGILNFVTKRALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTNGHQ 355
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
Q D+GTKM+H+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG +
Sbjct: 356 QADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPD 415
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
GAHT PY+E +NSS LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +
Sbjct: 416 SGAHTFPYVEVRNSSAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSE 475
Query: 468 LPMEFAVEAQKLIDISLEGSVG 489
LP+EFAVEAQKL+ ISLE SVG
Sbjct: 476 LPLEFAVEAQKLLAISLEHSVG 497
>gi|172058341|ref|YP_001814801.1| FeS assembly protein SufB [Exiguobacterium sibiricum 255-15]
gi|171990862|gb|ACB61784.1| FeS assembly protein SufB [Exiguobacterium sibiricum 255-15]
Length = 465
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 286/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF +I + ++ +GL +++ IS K EP WML++RL + + + P+W
Sbjct: 7 EIGDYKYGFHDRDISIFRSGRGLTTEVVETISKMKEEPQWMLDFRLKSLKIFNEQSMPAW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ FDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSDLRFDDITYYVKPSER-AEKSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K EL+ G++F A+ E+ DL ++Y ++P DN +AALN+
Sbjct: 119 -VSAQYESEVVYHNMKSELEDQGIVFKDTDTALKENEDLFREYFGKLIPPTDNKFAALNT 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKMDTPLQAYFRINSENMGQFERTLIIVDEEASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE+ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIFINKNAYCRYTTIQNWA-------NNVYNLVTKRAICEA-GATMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE S G SIAI+ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGSRGMTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 HGGKVTYRGIVHFGRKATGARSNIECDTLIMDNQSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI +E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISQEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|312867928|ref|ZP_07728132.1| FeS assembly protein SufB [Streptococcus parasanguinis F0405]
gi|311096332|gb|EFQ54572.1| FeS assembly protein SufB [Streptococcus parasanguinis F0405]
Length = 470
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 299/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF ++Q + KGLNE +IR +SA KNEP+WMLE+RL ++
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVQPILSTGKGLNEAVIRELSAAKNEPEWMLEFRLKSF 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANTGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|306836144|ref|ZP_07469130.1| FeS assembly protein SufB [Corynebacterium accolens ATCC 49726]
gi|304567994|gb|EFM43573.1| FeS assembly protein SufB [Corynebacterium accolens ATCC 49726]
Length = 479
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 201/489 (41%), Positives = 288/489 (58%), Gaps = 18/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ T D++ + Y+YG+ + A +GLNED++R ISAKK EP+WML RL
Sbjct: 8 PDNKMTDDEIID-SIGAYEYGWHDSDSAGASAARGLNEDVVRDISAKKGEPEWMLNQRLK 66
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + PSW IDFD + YY Q+ DD+ ++ TY+KLGIP
Sbjct: 67 ALNIFDKKPIPSWG-ADLSGIDFDQIKYYVKSTEEQA-QTWDDLPDDIKATYDKLGIPEA 124
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V +E+L+ GVIF+ A+ ++P+L K++ TV
Sbjct: 125 EKQRLV------AGVAAQYESEVVYHQIREDLESQGVIFVDTDTALRDYPELFKEHFGTV 178
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN ++ALNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +Y
Sbjct: 179 IPAGDNKFSALNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY 238
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 239 VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SSNVYNLVTKRTK 291
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ W GS +T KYP+ + G + GE S+A + Q D+G KM H+A
Sbjct: 292 V-EEGGTMEWVDGNIGSKVTMKYPAVWMTGPHAKGEVLSVAFAGEGQFQDTGAKMTHMAP 350
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
T+S IVSK ++ YRG V V++ A HS + +CD+LL+ N + T PY + +N
Sbjct: 351 YTSSNIVSKSVARAGGRAAYRGLVQVNQNAHHSTSNVECDALLVDNISRSDTYPYNDIRN 410
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
L HEAT S++S+E LFY + RGI EE A+A+IV GFV + ++LPME+A+E +LI
Sbjct: 411 EYVTLGHEATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALELNRLI 470
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 471 ELQMEGSVG 479
>gi|157370420|ref|YP_001478409.1| cysteine desulfurase activator complex subunit SufB [Serratia
proteamaculans 568]
gi|157322184|gb|ABV41281.1| FeS assembly protein SufB [Serratia proteamaculans 568]
Length = 498
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 286/492 (58%), Positives = 365/492 (74%), Gaps = 25/492 (5%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + + G+NED++R ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSEGRYKEGFFTQLATYELAMGINEDVVRAISAKRNEPEWMLEFRLEAYRAWLQMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIV----------------GPQSLDDVDPELLRTYEKLGI 117
+ Y +++ D YY+AP P + + E+ + +LG+
Sbjct: 76 LKANYERLNYQDYSYYSAPSCGSCDDACGSQPGAEQQPGAPTDNNYLTSEVELAFNQLGV 135
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P+RE S+VAVDA+FDSVSV TT++E+L +SGVIF EAI E+PDLV++YL
Sbjct: 136 PVRE--------GSEVAVDAIFDSVSVSTTYREKLAESGVIFCSFGEAIHEYPDLVREYL 187
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IADE
Sbjct: 188 GRVVPSNDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADE 247
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G KGGI NFVTK
Sbjct: 248 GSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQNWFSGG-DSKGGILNFVTK 306
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A+++G QQ D+GTKM+H
Sbjct: 307 RALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTSGHQQADTGTKMIH 366
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT PY+E
Sbjct: 367 IGKNTRSTIIAKGISAGHSENTYRGLVKILPGAENARNFTQCDSMLIGPDSGAHTFPYVE 426
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
++N+S LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEAQ
Sbjct: 427 ARNNSAQLEHEATTSKIGDDQLFYCLQRGISEDNAISMIVNGFCKDVFSELPLEFAVEAQ 486
Query: 478 KLIDISLEGSVG 489
KL+ ISLE SVG
Sbjct: 487 KLLAISLEHSVG 498
>gi|159896939|ref|YP_001543186.1| FeS assembly protein SufB [Herpetosiphon aurantiacus ATCC 23779]
gi|159889978|gb|ABX03058.1| FeS assembly protein SufB [Herpetosiphon aurantiacus ATCC 23779]
Length = 472
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 205/482 (42%), Positives = 285/482 (59%), Gaps = 20/482 (4%)
Query: 12 RKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+I+ D KYGF K+ KGLN DI+R IS K EP+WML+ RL A +
Sbjct: 7 NEIEFDYSKYGFRDEENYTFKSSKGLNADIVRTISEMKGEPEWMLQRRLKALEIFHKKPL 66
Query: 71 PS---WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P WA R +DF D++YY P + DDV + T+EKLGIP E++ LAG
Sbjct: 67 PVSGVWANPRLAELDFQDIHYYVRPGER-AENNWDDVPESIKNTFEKLGIPEAERKFLAG 125
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V + +EE +K GVIF+ + E+P+L K+Y T++P DN
Sbjct: 126 -------VGAQYESEVVYHSLREEWEKLGVIFLDTDTGLKEYPELFKEYFGTIIPSADNK 178
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALN+AV++ GSFVY+PKGV+ + L YFRIN + GQFERTLII DEG+ V Y+EGC
Sbjct: 179 FAALNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAENMGQFERTLIIVDEGAEVHYIEGC 238
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP N LH+AVVE++ + +Y+T+QNW I+N VTKR +
Sbjct: 239 TAPVYSTNSLHSAVVEIIIKKGGKCRYTTIQNWA-------NNIFNLVTKRAVAY-EDAS 290
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYP+ + G + GE S+A + Q D+G KM+H A +TTSRI
Sbjct: 291 MEWVDGNIGSKLTMKYPAVYMMGRGAKGEVLSVAYAGEGQHQDAGAKMVHGAPDTTSRIT 350
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+K +S TYRG V RGA +++ CD+L++ N + TIPYIE + S + H
Sbjct: 351 NKSVSKNGGRTTYRGLAKVMRGAHNAKINVVCDALILDNRSASDTIPYIEIEEDSATVAH 410
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT KI +E LFY + RG+ E A+++IV GF+ ++LPME+AVE +LI + +EGS
Sbjct: 411 EATVGKIGEEQLFYLMSRGLDEAEALSMIVLGFMEPFTRELPMEYAVELNRLIQMEMEGS 470
Query: 488 VG 489
VG
Sbjct: 471 VG 472
>gi|296877426|ref|ZP_06901463.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus parasanguinis ATCC 15912]
gi|296431587|gb|EFH17397.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus parasanguinis ATCC 15912]
Length = 470
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 299/487 (61%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF ++Q + KGLNE +IR +SA KNEP+WMLE+RL ++
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVQPILSTGKGLNEAVIRELSAAKNEPEWMLEFRLKSF 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENTGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|226366393|ref|YP_002784176.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus B4]
gi|226244883|dbj|BAH55231.1| putative iron-sulfur cluster assembly protein SufB [Rhodococcus
opacus B4]
Length = 486
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 194/490 (39%), Positives = 294/490 (60%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKI-DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
A E + + I + Y YG+ + A +GL+ED++R ISAKK+EPDWML+ RL
Sbjct: 13 SANAEPLTQEETIASLGHYGYGWSDSDEAGASAQRGLSEDVVRDISAKKSEPDWMLDIRL 72
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + + P+W I FD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 73 RALKTFDKKPMPNWGS-DLEGIHFDNIKYFVRSSEKQA-ESWEDLPEDIKNTYDKLGIPE 130
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V + +E+L+ GVIF+ + +HP+L ++Y T
Sbjct: 131 AEKQRLV------AGVAAQYESEVVYHSIREDLESQGVIFLDTDTGLKQHPELFQEYFGT 184
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+
Sbjct: 185 VIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEGA 244
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 245 SVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGHCRYTTIQNW-------SNNVYNLVTKRT 297
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
S + W GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA
Sbjct: 298 KVEAGGS-MEWIDGNIGSKVTMKYPAVWMMGEHARGEVLSVAFAGEGQHQDTGAKMLHLA 356
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S I+SK ++ G +YRG V V++GA S++ +CD+LL+ + T PY++ +
Sbjct: 357 PHTSSTIISKSVARGGGRASYRGLVQVNKGAHGSKSTVKCDALLVDQISRSDTYPYVDIR 416
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT SK+SD+ LFY + RG+ E+ A+A +V GFV + ++LPME+A+E +L
Sbjct: 417 EDDVTMGHEATVSKVSDDQLFYLMSRGLTEDEAMATVVRGFVEPIAKELPMEYALELNRL 476
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 477 IELQMEGAVG 486
>gi|319650434|ref|ZP_08004575.1| ABC transporter-associated protein [Bacillus sp. 2_A_57_CT2]
gi|317397845|gb|EFV78542.1| ABC transporter-associated protein [Bacillus sp. 2_A_57_CT2]
Length = 465
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 199/476 (41%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF + ++ + ++ +GL ++I+ IS K EP WML++RL + + M P W
Sbjct: 7 EIGDYKYGFADKDVSIFRSKRGLTKEIVEEISKLKEEPQWMLDFRLKSLEHFYNMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLASLNFDEITYYVKPSEKTE-RSWDEVPDEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +E+L+ G++F A+ E+ D+ +++ + V+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMQEDLEAKGIVFKDTDSALRENEDIFREHWAKVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW ++N VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIIKKDAYCRYTTIQNWA-------NNVFNLVTKRAVC-ESNATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A +R +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYRGIVHFGRKAEGARANIECDTLIMDNQSTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|73663166|ref|YP_301947.1| hypothetical protein SSP1857 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123775328|sp|Q49W57|Y1857_STAS1 RecName: Full=UPF0051 protein SSP1857
gi|72495681|dbj|BAE19002.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 465
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 208/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV Y+YGF ++ + ++ +GL E+I+R IS K EP+WML +RL + +++ M P W
Sbjct: 7 DVGNYQYGFHDEDVSIFRSERGLTENIVREISNMKEEPEWMLNYRLKSLKQFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELDFDDITYYVKPSENTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL+ G+IF A+ E+ +L K+Y STVVP DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEDKGIIFKDTDSALRENEELFKQYFSTVVPAADNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVNYVEGCTAPVYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTLVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 290 NLGSKLTMKYPNCVLMGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 DGGKVVYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|227542130|ref|ZP_03972179.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51866]
gi|227181959|gb|EEI62931.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51866]
Length = 477
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 201/493 (40%), Positives = 291/493 (59%), Gaps = 20/493 (4%)
Query: 1 MVAVRETV---DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M A + D++ + +Y YG+ + A KGL+E+++R ISA KNEP+WMLE
Sbjct: 1 MTAPTDKKMSDDEIIQSMSSKYSYGWHDSDDAGQAAKKGLDEEVVRTISATKNEPEWMLE 60
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
RL A + P W IDFD+ Y+ +D+ ++ TY+KLG
Sbjct: 61 QRLKALEIFEKKPIPKWGP-DLSFIDFDEFKYFVRSTEKPAAS-WEDLPDDIRNTYDKLG 118
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
IP E++ L V A ++S V +E+L++ GVIF+ + + EHPDL K+Y
Sbjct: 119 IPEAEKQRLV------AGVAAQYESEVVYHQIREDLEEKGVIFLDMDSGLREHPDLFKEY 172
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
TVVP GDN ++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII D
Sbjct: 173 FGTVVPAGDNKFSALNAAVWSGGSFIYVPKGVHVEIPLQAYFRINTESMGQFERTLIIVD 232
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+YV Y+EGCTAP + LHAAVVE++ +NA +Y+T+QNW + N VT
Sbjct: 233 EGAYVHYVEGCTAPIYKADALHAAVVEIIVKENARCRYTTIQNW-------SNNVLNLVT 285
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+R C + W GS I KYP+ L GE + G S A + Q D+G KM+
Sbjct: 286 QRSRCEA-GGTMEWVDGNIGSKICMKYPAVWLAGEYASGSVLSAAFAGEGQIQDTGAKMV 344
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
HLA +T+S IVSK ++ YRG V ++ A HS + +CD+LL+ + T PY
Sbjct: 345 HLAPHTSSNIVSKSVARSGGRAAYRGLVQINANAHHSTSNVECDALLVDEISRSDTYPYN 404
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ +N +L HEAT S++S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E
Sbjct: 405 DIRNDHVSLGHEATVSQVSEDQLFYLMARGLAEDEAMAMIVRGFVEPIAKELPMEYALEL 464
Query: 477 QKLIDISLEGSVG 489
+LI++ +EGSVG
Sbjct: 465 NRLIELQMEGSVG 477
>gi|270261595|ref|ZP_06189868.1| hypothetical protein SOD_a08270 [Serratia odorifera 4Rx13]
gi|270045079|gb|EFA18170.1| hypothetical protein SOD_a08270 [Serratia odorifera 4Rx13]
Length = 498
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 287/492 (58%), Positives = 365/492 (74%), Gaps = 25/492 (5%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + D+ G+NED++R ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSEGRYKEGFFTQLDTDELATGINEDVVRAISAKRNEPEWMLEFRLEAYRAWLQMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DDVDPELLRTYEKLGI 117
+ Y +++ D YY+AP + + E+ + +LG+
Sbjct: 76 LKANYDRLNYQDYSYYSAPSCGSCDDACGSQPGAEQQPGAATENSYLTSEVELAFNQLGV 135
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P+RE S+VAVDA+FDSVSV TT++E+L +SGVIF EAI E+PDLV+KYL
Sbjct: 136 PVRE--------GSEVAVDAIFDSVSVSTTYREKLAESGVIFCSFGEAIQEYPDLVRKYL 187
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IADE
Sbjct: 188 GRVVPSNDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADE 247
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G KGGI NFVTK
Sbjct: 248 GSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQNWFSGG-DSKGGILNFVTK 306
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A+++G QQ D+GTKM+H
Sbjct: 307 RALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTSGHQQADTGTKMIH 366
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ KNT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT PY+E
Sbjct: 367 IGKNTRSTIIAKGISAGHSENTYRGLVKILPGAENARNFTQCDSMLIGPDSGAHTFPYVE 426
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
++N+S LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEAQ
Sbjct: 427 ARNNSAQLEHEATTSKIGDDQLFYCLQRGISEDNAISMIVNGFCKDVFSELPLEFAVEAQ 486
Query: 478 KLIDISLEGSVG 489
KL+ ISLE SVG
Sbjct: 487 KLLAISLEHSVG 498
>gi|322386842|ref|ZP_08060466.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
gi|321269124|gb|EFX52060.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
Length = 470
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 208/487 (42%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA KNEP+WML++RL +Y
Sbjct: 1 MSEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEAVIRELSAAKNEPEWMLDFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W I+FDDL YY +S D+V ++ T+E++GIP E+
Sbjct: 61 EVFKKMPMQTWGP-DLSEINFDDLIYYQKASDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G++F A+ E+P+L K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIVFTDTDSALKEYPELFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + +GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENSGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAM 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|50913623|ref|YP_059595.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
gi|50902697|gb|AAT86412.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
Length = 472
Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats.
Identities = 206/490 (42%), Positives = 295/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ ++ ID+ Y++GF +++ + KGL+E ++R +SA KNEP+WMLE+RL
Sbjct: 1 MSDINEKVE-LKPIDLGDYQFGFHDDVEPIYSTGKGLSEAVVRELSAAKNEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W I+FDD+ YY +S DDV ++ T++++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPEKIKETFDRIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K E +K G+IF A+ E+PDL K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKGEFEKLGIIFTDTDSALKEYPDLFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 RAL-TDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKSGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|298243351|ref|ZP_06967158.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
gi|297556405|gb|EFH90269.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
Length = 466
Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats.
Identities = 196/478 (41%), Positives = 291/478 (60%), Gaps = 18/478 (3%)
Query: 13 KIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+++ Y GF K+ KG++ ++ IS K EP WM ++RL + + + P
Sbjct: 6 ELEQGNYTAGFHVAENYTYKSEKGIDARVVAQISEMKGEPSWMRDFRLKSLKLFEKRPMP 65
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
+W I+FDD+YYY P G ++ DD+ E+ T+++LGIP EQ+ LAG
Sbjct: 66 TWG-ADLSGINFDDIYYYIKPVPQQG-KTWDDIPAEIKDTFDRLGIPQAEQKYLAG---- 119
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
V A ++S +V +E+L+K GVIF + A+ E+PDL+K++ T+VP DN +A+L
Sbjct: 120 ---VTAQYESEAVYHKMREDLEKLGVIFTDMDTALREYPDLIKEHFGTIVPPSDNKFASL 176
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
NSAV++ GSFVY+P+ VR + L YFRIN K GQFERTLIIA GSYV Y+EGCTAP
Sbjct: 177 NSAVWSGGSFVYVPENVRVEIPLQAYFRINAKNMGQFERTLIIAAPGSYVHYVEGCTAPS 236
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ LH+AVVE+ A++ A I+Y+T+QNW +YN VTKR + + W
Sbjct: 237 YTSDSLHSAVVEIKAMEGARIRYTTIQNW-------SKNVYNLVTKRAAAY-RDATMEWV 288
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS +T KYP+ +L + G+ S+A +N D+G K+ HLA +TTS+I+SK +
Sbjct: 289 DGNLGSKVTMKYPAVMLMEPGARGDVLSVAFANDGMHQDAGAKITHLAPHTTSQILSKSV 348
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S G +YRG V ++ GA H+++ +CD+LL+ N T P I + + + HEAT
Sbjct: 349 SKGTGRASYRGLVRINPGAHHTKSSVRCDALLLDENARTDTYPTIRVEENQTEIGHEATV 408
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SK+ ++ LFY + RG+ E A +LIVNGF+ + ++LPME+AVE +LI + + GSVG
Sbjct: 409 SKVGEDQLFYLMSRGLDESEAYSLIVNGFIEPITKELPMEYAVELNRLIQLEMSGSVG 466
>gi|332359811|gb|EGJ37625.1| FeS assembly protein SufB [Streptococcus sanguinis SK1056]
Length = 470
Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats.
Identities = 208/487 (42%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA KNEP+WML++RL +Y
Sbjct: 1 MSEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEAVIRELSAAKNEPEWMLDFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W I+FDDL YY +S D+V ++ T+EK+GIP E+
Sbjct: 61 EAFKKMPMQTWGP-DLSEINFDDLIYYQKASDKPA-RSWDEVPEKIKETFEKIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G++F A+ E+P+L K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIVFTDTDSALKEYPELFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + +GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENSGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAM 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ + + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|283794872|ref|YP_003359225.1| putative ABC transporter [Cryptomonas paramecium]
gi|253981844|gb|ACT46761.1| putative ABC transporter [Cryptomonas paramecium]
Length = 492
Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats.
Identities = 282/479 (58%), Positives = 366/479 (76%), Gaps = 5/479 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
V+ + Y+YGF+T+I + P+G+ EDI+ IS KK EP ++L +RL AY W+ M
Sbjct: 19 VKDLIHSSYQYGFKTDIVTEAFPRGITEDIVMLISGKKKEPSFVLSFRLRAYSVWVRMAY 78
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA + Y ID++++ Y+ PK SL +VD ++L+T+EKLG+P+ EQ+ LA
Sbjct: 79 PEWACLSYAPIDYNNILCYSMPKFDKKLSSLSEVDGKILKTFEKLGVPLGEQKRLA---- 134
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVDA+FDSVSV TTF+EEL K GVIF P+SEA +P +V++Y +VVP+GDN+++A
Sbjct: 135 -NVAVDAIFDSVSVGTTFREELLKVGVIFCPLSEAFIHYPHVVERYFGSVVPIGDNYFSA 193
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF++GSF Y+PKGV CP++LSTYFRIN + +GQFERTLI+AD+ S V+YLEGCTAP
Sbjct: 194 LNSAVFSEGSFCYVPKGVCCPLDLSTYFRINAENSGQFERTLIVADDSSKVTYLEGCTAP 253
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ D NQLHAAVVELVAL NAEI+YSTVQNWY GD+ G GGIYNFVTKRG C G S+ISW
Sbjct: 254 KFDTNQLHAAVVELVALRNAEIRYSTVQNWYSGDAGGLGGIYNFVTKRGVCSGFGSRISW 313
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGS++TWKYPSCLL G++S GEFYS+A++N +QQ D+GTKM+H+ K T SRIVSKG
Sbjct: 314 TQVETGSSLTWKYPSCLLVGDESVGEFYSVALTNNYQQADTGTKMVHVGKKTRSRIVSKG 373
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS G S NTYRG+V + A S N++QCDSLL+G+ A+T P+++ NS +EHEA+
Sbjct: 374 ISVGNSKNTYRGQVRILPKALGSSNYSQCDSLLVGSKSQANTFPHVKVGNSHSRVEHEAS 433
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TSK+ +E LFY QRGI E AI L+V+GF REV KLPMEFAVEA +L+ + LEG VG
Sbjct: 434 TSKVEEEQLFYLSQRGIGLEEAINLLVSGFCREVFNKLPMEFAVEADRLLSLKLEGGVG 492
>gi|297561905|ref|YP_003680879.1| FeS assembly protein SufB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846353|gb|ADH68373.1| FeS assembly protein SufB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 470
Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats.
Identities = 192/475 (40%), Positives = 291/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ + + +GLNE+++R ISAKK+EP+WM + RL + R + P+W
Sbjct: 12 IGTYEYGWADSDAAGASARRGLNEEVVRDISAKKDEPEWMTKLRLKSLRLFDKKPMPNWG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY++LGIP E++ L
Sbjct: 72 -ADLSKIDFDNIKYFVRSTEKQATS-WEDLPEDIKNTYDRLGIPEAEKQRLV------AG 123
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ A+ EHP++ ++Y +V+P GDN +AALN+A
Sbjct: 124 VAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPEIFEEYFGSVIPAGDNKFAALNTA 183
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PK V + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 184 VWSGGSFIYVPKNVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKS 243
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ NA +Y+T+QNW ++N VTKR + + W
Sbjct: 244 DSLHSAVVEIIVKKNARCRYTTIQNW-------SNNVFNLVTKRAVA-EEGATMEWIDGN 295
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA + Q D+G+KM+H A NT+S I+SK ++ G
Sbjct: 296 IGSQVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDTGSKMVHCAPNTSSTIISKSVARG 355
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V GA H+++ +CD+LLI + T PY + + L HEAT SK+
Sbjct: 356 GGRASYRGLVQVQEGADHAKSSVKCDALLIDTISRSDTYPYNDLREDDAELAHEATVSKV 415
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EG+VG
Sbjct: 416 SEDQLFYLMSRGMDEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG 470
>gi|84496525|ref|ZP_00995379.1| hypothetical protein JNB_03360 [Janibacter sp. HTCC2649]
gi|84383293|gb|EAP99174.1| hypothetical protein JNB_03360 [Janibacter sp. HTCC2649]
Length = 472
Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats.
Identities = 191/490 (38%), Positives = 295/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E ++ D+ +Y +G+ +++ A +GLN+D++ IS +K+EP WM + R+
Sbjct: 1 MSTIEELNPGLK--DIGRYDFGWADSDAAGTNARRGLNDDVVLDISRRKSEPQWMEDLRM 58
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ R + P+W IDF ++ Y+ +D+ ++ TY++LGIP
Sbjct: 59 KSLRLFHKKPMPTWGS-DLTGIDFQNIKYFVKSTEKQATS-WEDLPEDIKNTYDRLGIPE 116
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ + EH DL ++Y ++
Sbjct: 117 AEKQRLV------SGVAAQYESEVVYHQIREDLEEKGVIFVDTDTGLREHEDLFREYFAS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN +AALN+AV++ GSF+YIP GV + L YFRIN + GQFERTLIIADEGS
Sbjct: 171 VIPAGDNKFAALNTAVWSGGSFIYIPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGS 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR
Sbjct: 231 YVHYVEGCTAPIYQSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GE + GE S+A + Q D+G+KM+H A
Sbjct: 284 TC-AEGATMEWIDGNIGSKVTMKYPAVFLMGEHAKGETLSVAFAGEGQHQDAGSKMVHAA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG V + GA S++ CD+LL+ + T PY++ +
Sbjct: 343 PNTSSTIVSKSVARGGGRTSYRGLVQIMEGAHGSKSSVVCDALLVDTISRSDTYPYVDIR 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEAT SK+S++ +FY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 403 EDDVTMGHEATVSKVSEDQMFYLMSRGMSETEAMAMIVRGFVEPIAKELPMEYALELNRL 462
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 463 IELQMEGAVG 472
>gi|320533897|ref|ZP_08034478.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133885|gb|EFW26252.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 479
Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 289/488 (59%), Gaps = 17/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
R T D++ Y +G+ + +KA +GL+E ++R ISA K EP+WML RL A
Sbjct: 8 TTRSTDDEIIDSISTSYDFGWHDSDEAGEKARRGLDEQVVREISAIKGEPEWMLAKRLKA 67
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y + P+W + +D D + YY S DD+ ++ TY+++GIP E
Sbjct: 68 YSTFERKPMPTWG-VDLSQLDMDAVKYYVRSTDRPA-NSWDDLPEDIKNTYDRIGIPEAE 125
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L V A ++S V + +L++ GVIF+ A+ E+P+LVK+Y TVV
Sbjct: 126 RERLV------AGVAAQYESEVVYHQIRGDLEEQGVIFVDTDTAVREYPELVKEYFGTVV 179
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADE SYV
Sbjct: 180 PAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYV 239
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+A+VE+V NA ++Y+T+QNW +YN VT+R C
Sbjct: 240 HYVEGCTAPIYSTDSLHSAIVEIVVKKNARVRYTTIQNW-------SNNVYNLVTQRATC 292
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS KYP+ L G + GE SIA + Q D+G KM+H+A +
Sbjct: 293 -EEGATMEWIDGNIGSKRNMKYPAVFLMGPHARGEALSIAFAGEDQHQDTGAKMVHMAPH 351
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IVSK I+ + YRG V + + A HS++ CD+LL+ + T PY++ +
Sbjct: 352 TSSHIVSKSIARHGGRSAYRGLVQIMKNARHSKSNVLCDALLVDEISRSDTYPYVDVRTD 411
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ HEAT SK+S + LFY +QRG+ E A+A IV GFV + ++LPME+A+E +LI+
Sbjct: 412 DVEMGHEATVSKVSADQLFYLMQRGLTETEAMATIVRGFVEPIARELPMEYALELNRLIE 471
Query: 482 ISLEGSVG 489
+ +E SVG
Sbjct: 472 LQMENSVG 479
>gi|238753647|ref|ZP_04615009.1| hypothetical protein yruck0001_13780 [Yersinia ruckeri ATCC 29473]
gi|238708199|gb|EEQ00555.1| hypothetical protein yruck0001_13780 [Yersinia ruckeri ATCC 29473]
Length = 506
Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats.
Identities = 288/515 (55%), Positives = 372/515 (72%), Gaps = 35/515 (6%)
Query: 1 MVAVRETVDKVRK-----IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWML 55
M + + +V + YK GF T + D+ KG+NED++R ISAK+NEP+WML
Sbjct: 1 MNEMTRSKVEVPDDVQAWVSDGGYKEGFFTQLATDELAKGINEDVVRAISAKRNEPEWML 60
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL-------------- 101
E+RL AYR WL M++P W + Y ++D+ D YY+AP +S
Sbjct: 61 EFRLGAYRSWLEMEEPHWLKAHYQSLDYQDYSYYSAPSCGSCDESCGSQPGAVQQPTDGE 120
Query: 102 -------DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
D + E+ + +LG+P+RE ++VAVDA+FDSVSV TT++ +L +
Sbjct: 121 GLSTAANDYLTAEVESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYRGKLAE 172
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
G+IF EAI E+PDLV+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMEL
Sbjct: 173 QGIIFCSFGEAIQEYPDLVRKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMEL 232
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
STYFRIN TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ NAE+KY
Sbjct: 233 STYFRINAAKTGQFERTILIADEGSYVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKY 292
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
STVQNW+ G + GGI NFVTKR C G SK+SWTQ ETGSAITWKYPS +L+G+ S
Sbjct: 293 STVQNWFAGTAS-TGGILNFVTKRALCEGEGSKMSWTQSETGSAITWKYPSVILQGDNSI 351
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
GEF+S+A++NG+QQ D+GTKM+H+ KNT S I++KGISAG S NTYRG V + A ++R
Sbjct: 352 GEFFSVALTNGYQQADTGTKMIHIGKNTKSTIIAKGISAGHSQNTYRGLVKILPSAENAR 411
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
NFTQCDS+LIG++ GAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI+
Sbjct: 412 NFTQCDSMLIGSDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAIS 471
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 MIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 506
>gi|296140209|ref|YP_003647452.1| FeS assembly protein SufB [Tsukamurella paurometabola DSM 20162]
gi|296028343|gb|ADG79113.1| FeS assembly protein SufB [Tsukamurella paurometabola DSM 20162]
Length = 485
Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats.
Identities = 190/475 (40%), Positives = 289/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ + A +GL+E ++ ISAKKNE +WML+ RL A + P+W
Sbjct: 27 LGTYGYGWHDSDAAGASAQRGLSEAVVADISAKKNESEWMLQQRLKALSIFDKKPMPTWG 86
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +S +D+ ++ TY+KLGIP E++ L
Sbjct: 87 S-NLDGIDFDNIKYFVRSSEKQA-ESWEDLPEDIKNTYDKLGIPEAEKQRLV------AG 138
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V + +E+L++ GVIFM + EHP+L ++Y +V+P GDN ++ALN+A
Sbjct: 139 VAAQYESEVVYHSIREDLEEKGVIFMDTDTGLREHPELFEEYFGSVIPAGDNKFSALNTA 198
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 199 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKS 258
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAKAEA-GATMEWIDGN 310
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE S+A + Q D+G+KM+H A NT+S IVSK ++ G
Sbjct: 311 IGSKVTMKYPAVWMMGEHAKGEVLSVAFAGEGQHQDTGSKMVHFAPNTSSNIVSKSVARG 370
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG + +++GA SR+ +CD+LL+ + T PY++ + + HEAT SK+
Sbjct: 371 GGRASYRGLIQINKGAHGSRSTVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV 430
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 431 SDDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGSVG 485
>gi|298241817|ref|ZP_06965624.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
gi|297554871|gb|EFH88735.1| FeS assembly protein SufB [Ktedonobacter racemifer DSM 44963]
Length = 468
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 196/481 (40%), Positives = 294/481 (61%), Gaps = 18/481 (3%)
Query: 10 KVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+V + +Y GF V K+ +GL++ + IS K EPDWM ++RL + +
Sbjct: 5 QVYGTEQQEYTAGFHMAEKYVFKSERGLSKKGVEQISEMKGEPDWMRQFRLKSLALFEKR 64
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P+W IDF+++YYY P + G ++ DD+ E+ T+++LGIP EQ+ LAG
Sbjct: 65 PMPTWG-ADLSGIDFENIYYYIKPVAQQG-KTWDDIPAEIKETFDRLGIPQAEQKFLAG- 121
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A ++S +V + +L+K GVIF + A+ E+PD+VK++ TV+P DN +
Sbjct: 122 ------VTAQYESEAVYHKMRADLEKLGVIFTDMDTALREYPDIVKEHFGTVIPPSDNKF 175
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A+LNSAV++ GSFVY+P+GVR + L YFRIN + GQFERTLIIA GSYV Y+EGCT
Sbjct: 176 ASLNSAVWSGGSFVYVPEGVRVEIPLQAYFRINAQNMGQFERTLIIAAPGSYVHYVEGCT 235
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP + LH+AVVE+ ++ A ++Y+T+QNW +YN VTKR + +
Sbjct: 236 APSYASDSLHSAVVEIKVMEGARVRYTTIQNW-------SKNVYNLVTKRAVAY-RDATM 287
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS +T KYP+ LL + G+ S+A ++ +D+G K+ HLA +TTS+I+S
Sbjct: 288 EWVDGNLGSKVTMKYPAVLLMEPGARGDILSVAFASDGMHLDAGAKVTHLAPHTTSQILS 347
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K +S G +YRG V V+ GA H+++ +CD+LL+ + T P I + + + HE
Sbjct: 348 KSVSKGNGRASYRGLVRVNPGAHHTKSSVRCDALLLDEHARTDTYPTIRVEENQTEIGHE 407
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AT SK+ D+ LFY + RG+ E A +LIVNGF+ + ++LPME+AVE +LI + + GSV
Sbjct: 408 ATVSKVGDDQLFYLMSRGLDEAEAYSLIVNGFIEPITKELPMEYAVELNRLIQLEMSGSV 467
Query: 489 G 489
G
Sbjct: 468 G 468
>gi|23099831|ref|NP_693297.1| hypothetical protein OB2376 [Oceanobacillus iheyensis HTE831]
gi|22778062|dbj|BAC14332.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 465
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 288/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++D+YKYGF ++ + + KGL ++ IS K EP+WMLE+RL + + P W
Sbjct: 7 EIDEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYNRPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD++ YY P G ++ D+V E+ +T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSGLDFDEIVYYVKPSEKQG-RTWDEVPEEIKQTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + KE+L+ G+IF A+ E+ +L K+Y V+P DN ++ALNS
Sbjct: 119 -VSAQYESEVVYHSLKEDLQDLGIIFKDTDTALKENEELFKEYFGKVIPYSDNKFSALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW +YN VTKR C + + W
Sbjct: 238 TNSLHSAVVEIIVKKDAYCRYTTIQNWA-------NNVYNLVTKRATCDA-NATMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LL+GE + G SIA++ Q D+G KM HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAILLKGEGARGNTLSIALAGKGQLQDAGAKMHHLAPNTSSTIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+YRG V R A +R +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVSYRGLVHFGRKADGARANIECDTLIMDNESTSDTIPYNEILNDNISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|310643919|ref|YP_003948677.1| abc-type transport system involved in fe-s cluster assembly,
permease component [Paenibacillus polymyxa SC2]
gi|309248869|gb|ADO58436.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Paenibacillus polymyxa SC2]
Length = 465
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 295/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ +YKYGF Q ++ KGL E+I+R IS K EP+WML +RL A ++ M P W
Sbjct: 7 DMGEYKYGFRDKHQSIFQSGKGLTEEIVREISRIKEEPEWMLNFRLKALNQFYKMPMPEW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ DD+ YY P G ++ ++V E+ T++KLGIP EQ+ LAG
Sbjct: 67 G-ADLTGLSLDDIQYYVRPSEKQG-KTWEEVPSEIKATFDKLGIPEAEQKFLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + ++EL+ GVIF+ A+ ++P++ K+Y T++P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMQKELEDQGVIFLDTDTALKQYPEVFKQYFGTIIPPADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVYIPKGV+C + + YFRIN + GQFERTLIIA+EGS+V Y+EGCTAP
Sbjct: 178 AVWSGGSFVYIPKGVQCEVPIQGYFRINSENMGQFERTLIIAEEGSFVHYVEGCTAPIYS 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+ V+E++ ++ ++Y+T+QNW P IYN VT+R + + W
Sbjct: 238 TSSLHSGVIEIICRKDSRVRYTTIQNWAP-------NIYNLVTQRAVV-EENATMKWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LL+G + G SIA++ Q D+G K++HLA TTS I+SK IS
Sbjct: 290 NIGSKVTMKYPAVLLKGRGAKGSILSIAVAGKDQHQDAGAKVIHLAPETTSTIISKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG S R +A S++ +CD+L++ N + TIPY E KN LEHEAT SK
Sbjct: 350 QGGKVNYRGLSSFSRDSAGSKSNIKCDTLILDNMSTSDTIPYNEIKNDQITLEHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGLTEQDATQMIVMGFIEPFTKELPMEYAVEMNRLIQFEMEGSIG 465
>gi|300781150|ref|ZP_07091004.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium genitalium ATCC 33030]
gi|300532857|gb|EFK53918.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium genitalium ATCC 33030]
Length = 468
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 191/475 (40%), Positives = 278/475 (58%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ + A +GL+E ++R ISA KNEP+WMLE RL A + P+W
Sbjct: 10 MGPYNYGWHDSDEAGAAARRGLDEQVVRDISAAKNEPEWMLEQRLKALDIYNKKPLPTWG 69
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD + Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 70 P-DLSGIDFDQIKYFVRSTEKQATS-WEDLPEDIKNTYDKLGIPEAEKQRLV------AG 121
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ + E+P+L K+Y +VVP GDN ++ALN+A
Sbjct: 122 VAAQYESEVVYHKIREDLEEQGVIFVDTDTGLREYPELFKEYFGSVVPAGDNKFSALNAA 181
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLI+ DE +YV Y+EGCTAP
Sbjct: 182 VWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIVVDEDAYVHYVEGCTAPIYQS 241
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE++ NA +Y+T+QNW +YN VT+R + + W
Sbjct: 242 DSLHAAVVEIIVKKNARCRYTTIQNW-------STNVYNLVTQRARA-EEGATMEWVDGN 293
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP+ + G + GE S Q D+G K++H+A NT+S IVSK +S
Sbjct: 294 IGSKVNMKYPAVWMTGPNARGEVLSAQFCGEGQTQDTGAKVVHMAPNTSSNIVSKSVSRN 353
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V ++ A +S + +CD+LL+ N T PY + +N L HEA SK+
Sbjct: 354 GGRAAYRGLVQINANAKNSTSNIECDALLVDNISRTDTYPYNDIRNDHVTLGHEAKVSKV 413
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY + RGI EE A+A+IV GF+ + ++LPME+A+E +LI++ +EGSVG
Sbjct: 414 SEEQLFYLMSRGISEEDAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGSVG 468
>gi|149007184|ref|ZP_01830848.1| FeS assembly protein SufB [Streptococcus pneumoniae SP18-BS74]
gi|168493025|ref|ZP_02717168.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC3059-06]
gi|147761222|gb|EDK68189.1| FeS assembly protein SufB [Streptococcus pneumoniae SP18-BS74]
gi|183576981|gb|EDT97509.1| FeS assembly protein SufB [Streptococcus pneumoniae CDC3059-06]
Length = 470
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 211/487 (43%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDF DL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFGDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL +Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFNQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|19745418|ref|NP_606554.1| hypothetical protein spyM18_0278 [Streptococcus pyogenes MGAS8232]
gi|21909748|ref|NP_664016.1| hypothetical protein SpyM3_0212 [Streptococcus pyogenes MGAS315]
gi|28895130|ref|NP_801480.1| hypothetical protein SPs0218 [Streptococcus pyogenes SSI-1]
gi|56807795|ref|ZP_00365646.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Streptococcus pyogenes M49
591]
gi|71902907|ref|YP_279710.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
gi|94987879|ref|YP_595980.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS9429]
gi|94989755|ref|YP_597855.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS10270]
gi|94991762|ref|YP_599861.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS2096]
gi|94993639|ref|YP_601737.1| ABC transporter [Streptococcus pyogenes MGAS10750]
gi|139473103|ref|YP_001127818.1| hypothetical protein SpyM50224 [Streptococcus pyogenes str.
Manfredo]
gi|209558809|ref|YP_002285281.1| Iron-sulfur cluster assembly protein SufB [Streptococcus pyogenes
NZ131]
gi|306828008|ref|ZP_07461274.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pyogenes ATCC 10782]
gi|19747528|gb|AAL97053.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|21903932|gb|AAM78819.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810375|dbj|BAC63313.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|71802002|gb|AAX71355.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
gi|94541387|gb|ABF31436.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS9429]
gi|94543263|gb|ABF33311.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS10270]
gi|94545270|gb|ABF35317.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS2096]
gi|94547147|gb|ABF37193.1| ABC transporter-associated protein sufB [Streptococcus pyogenes
MGAS10750]
gi|134271349|emb|CAM29567.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
gi|209540010|gb|ACI60586.1| Iron-sulfur cluster assembly protein SufB [Streptococcus pyogenes
NZ131]
gi|304429789|gb|EFM32832.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pyogenes ATCC 10782]
Length = 472
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 206/490 (42%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ + ID+ Y++GF +++ + KGL+E ++R +SA KNEP+WMLE+RL
Sbjct: 1 MSDINEKVE-PKPIDLGDYQFGFHDDVEPIYSTGKGLSEAVVRELSAAKNEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W I+FDD+ YY +S DDV ++ T++++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPEKIKETFDRIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K E +K G+IF A+ E+PDL K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKGEFEKLGIIFTDTDSALKEYPDLFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 RAL-TDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKSGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|50843025|ref|YP_056252.1| hypothetical protein PPA1549 [Propionibacterium acnes KPA171202]
gi|282854700|ref|ZP_06264035.1| FeS assembly protein SufB [Propionibacterium acnes J139]
gi|50840627|gb|AAT83294.1| conserved protein, UPF0051 [Propionibacterium acnes KPA171202]
gi|282582282|gb|EFB87664.1| FeS assembly protein SufB [Propionibacterium acnes J139]
gi|314923800|gb|EFS87631.1| FeS assembly protein SufB [Propionibacterium acnes HL001PA1]
gi|314966186|gb|EFT10285.1| FeS assembly protein SufB [Propionibacterium acnes HL082PA2]
gi|314981953|gb|EFT26046.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA3]
gi|315090865|gb|EFT62841.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA4]
gi|315095076|gb|EFT67052.1| FeS assembly protein SufB [Propionibacterium acnes HL060PA1]
gi|315104308|gb|EFT76284.1| FeS assembly protein SufB [Propionibacterium acnes HL050PA2]
gi|315106830|gb|EFT78806.1| FeS assembly protein SufB [Propionibacterium acnes HL030PA1]
gi|327328144|gb|EGE69913.1| FeS assembly protein SufB [Propionibacterium acnes HL103PA1]
Length = 482
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 195/472 (41%), Positives = 288/472 (61%), Gaps = 17/472 (3%)
Query: 19 YKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKYG+ + A +GL+ED++R ISA K+EP WML+ RL A + + P+W +
Sbjct: 27 YKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPTWG-VD 85
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
IDFD + Y+ + +D+ ++ TY++LGIP E++ L V A
Sbjct: 86 ISTIDFDQIKYFVRAQERQAAS-WEDLPADIKNTYDRLGIPEAEKDRLV------AGVAA 138
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++S V EEL K GV+F+ A+ E P+L +++ ++ VP+GDN ++ALNSAV++
Sbjct: 139 QYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWS 198
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
G+F+Y+PKGV C + L YFR+N + GQFERTLII DEG+YV Y+EGCTAP + L
Sbjct: 199 GGTFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSL 258
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVE++ NA +Y+T+QNW +YN VT+R + W GS
Sbjct: 259 HAAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTQRAYV-EEGGTMEWIDGNIGS 310
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
KYP+C L G + GE S+A + Q D+G KM+H A T+S IVSK IS G
Sbjct: 311 KANMKYPACYLMGPHAKGEALSVAFAAEGQHQDTGAKMVHKAPYTSSTIVSKSISQGGGR 370
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ YRG VSV + A HS + +CD+LL+ + + T PY + + ++ HEAT SK+S++
Sbjct: 371 SAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAHEATVSKVSED 430
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ EE A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 QLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|221632408|ref|YP_002521629.1| FeS assembly protein SufB [Thermomicrobium roseum DSM 5159]
gi|221155422|gb|ACM04549.1| FeS assembly protein SufB [Thermomicrobium roseum DSM 5159]
Length = 471
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 289/476 (60%), Gaps = 20/476 (4%)
Query: 17 DQY--KYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+Y KYGF Q KA KGL+ +++ IS KNEP+WM E+RL A +L P+W
Sbjct: 13 SEYAEKYGFRDPEQYVFKARKGLDREVVEQISWIKNEPEWMREFRLKALEYFLRRPMPTW 72
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FD++ YY P G +++ + RT+++LGIP E+ LAG
Sbjct: 73 G-ADLSELNFDEIVYYIKPTERQGTS-WEELPEHIRRTFDRLGIPEAERRFLAG------ 124
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +EELK+ GVIF + A+ E+PDLVK+Y T+VP DN +AALNS
Sbjct: 125 -VGAQYESEVVYHSLREELKRLGVIFCDMDTAVREYPDLVKQYFGTIVPPNDNKFAALNS 183
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+P+GVR + L YFRIN + GQFERTLII + G+YV Y+EGCTAP
Sbjct: 184 AVWSGGSFVYVPEGVRVDVPLQAYFRINAENVGQFERTLIIVEPGAYVHYVEGCTAPIYS 243
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LH+AVVE++ + A +Y+T+QNW +YN VTKR + + W
Sbjct: 244 AASLHSAVVEIIVKEGARCRYTTIQNW-------SKNVYNLVTKRAAAY-RDATMEWVDG 295
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ L + GE S+A + Q D+G KM+H+A T+S+I+SK IS
Sbjct: 296 NLGSKVTMKYPAVWLMEPGARGEVLSVAFAGDGQHQDAGGKMVHVAPYTSSQIISKSISK 355
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G +YRG V VHRGA H R CD+LL+ T PY+E + ++ HEAT SK
Sbjct: 356 GTGRASYRGLVKVHRGAHHVRANVVCDALLLDEQSRTDTYPYMEIEEEQVSIGHEATVSK 415
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+++E LFY RG+ E A+++IVNGF+ + ++LP+E+AVE +LI + +EGSVG
Sbjct: 416 VAEEQLFYLQSRGLTEAEAMSMIVNGFIEPITKELPLEYAVELNRLIALEMEGSVG 471
>gi|325069000|ref|ZP_08127673.1| FeS assembly protein SufB [Actinomyces oris K20]
gi|326773143|ref|ZP_08232426.1| FeS assembly protein SufB [Actinomyces viscosus C505]
gi|326636373|gb|EGE37276.1| FeS assembly protein SufB [Actinomyces viscosus C505]
Length = 479
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 289/488 (59%), Gaps = 17/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
R T D++ Y +G+ + +KA +GL+E ++R ISA K EP+WML RL A
Sbjct: 8 TTRSTDDEIIDSISTSYDFGWHDSDEAGEKAKRGLDEQVVREISAIKGEPEWMLAKRLKA 67
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y + P+W + +D D + YY S DD+ ++ TY+++GIP E
Sbjct: 68 YSTFERKPMPTWG-VDLSQLDMDAVKYYVRSTDRPA-NSWDDLPEDIKNTYDRIGIPEAE 125
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L V A ++S V + +L++ GVIF+ A+ E+P+LVK+Y TVV
Sbjct: 126 RERLV------AGVAAQYESEVVYHQIRGDLEEQGVIFVDTDTAVREYPELVKEYFGTVV 179
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADE SYV
Sbjct: 180 PAGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYV 239
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+A+VE+V NA ++Y+T+QNW +YN VT+R C
Sbjct: 240 HYVEGCTAPIYSTDSLHSAIVEIVVKKNARVRYTTIQNW-------SNNVYNLVTQRATC 292
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS KYP+ L G + GE SIA + Q D+G KM+H+A +
Sbjct: 293 -EEGATMEWIDGNIGSKRNMKYPAVFLMGPHARGEALSIAFAGADQHQDTGAKMVHMAPH 351
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IVSK I+ + YRG V + + A HS++ CD+LL+ + T PY++ +
Sbjct: 352 TSSHIVSKSIARHGGRSAYRGLVQIMKNARHSKSNVLCDALLVDEISRSDTYPYVDVRTD 411
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ HEAT SK+S + LFY +QRG+ E A+A IV GFV + ++LPME+A+E +LI+
Sbjct: 412 DVEMGHEATVSKVSADQLFYLMQRGLTETEAMATIVRGFVEPIARELPMEYALELNRLIE 471
Query: 482 ISLEGSVG 489
+ +E SVG
Sbjct: 472 LQMENSVG 479
>gi|195978799|ref|YP_002124043.1| iron-sulfur cluster assembly protein SufB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225867883|ref|YP_002743831.1| FeS assembly protein SufB [Streptococcus equi subsp. zooepidemicus]
gi|225871203|ref|YP_002747150.1| FeS assembly protein SufB [Streptococcus equi subsp. equi 4047]
gi|195975504|gb|ACG63030.1| iron-sulfur cluster assembly protein SufB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|225700607|emb|CAW95141.1| FeS assembly protein SufB [Streptococcus equi subsp. equi 4047]
gi|225701159|emb|CAW98050.1| FeS assembly protein SufB [Streptococcus equi subsp. zooepidemicus]
Length = 472
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 208/490 (42%), Positives = 295/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + ETV + ID+ Y++GF +++ + KGLNE ++R +SA K+EP+WMLE+RL
Sbjct: 1 MSDINETV-APQPIDLGDYQFGFHDDVEPIYSTGKGLNEAVVRELSAAKDEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W IDFD++ YY P +S DDV ++ T+E++GIP
Sbjct: 60 KSLEAFHKMPMQTWG-ADLSDIDFDEIIYYQKPSDKPA-RSWDDVPDKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K E +K G+IF A+ E+P+L K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKAEFEKLGIIFTDTDSALKEYPELFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNEHTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 RAL-KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTGQHQDTGAKMVHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKSGGKVDYRGQVTFNKLSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 IAYEMEGSVG 472
>gi|251789306|ref|YP_003004027.1| cysteine desulfurase activator complex subunit SufB [Dickeya zeae
Ech1591]
gi|247537927|gb|ACT06548.1| FeS assembly protein SufB [Dickeya zeae Ech1591]
Length = 499
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 283/493 (57%), Positives = 364/493 (73%), Gaps = 26/493 (5%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + +D+ G+NED++R ISA++NEP+WML +RL AYR WL M++P W
Sbjct: 16 LGDGRYKEGFFTELAMDQLAHGINEDVVRAISARRNEPEWMLAFRLSAYRAWLQMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSL-----------------DDVDPELLRTYEKLG 116
+ Y +++ D YY+AP S + + E+ ++KLG
Sbjct: 76 LKAHYEHLNYQDYSYYSAPSCGQCDDSCGSQPGAQQQPAGEVAHGNYLTREVEDAFDKLG 135
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
IP+RE + +VAVDA+FDSVSV TT+++EL K G+IF SEAI HP+LV++Y
Sbjct: 136 IPVREGK--------EVAVDAIFDSVSVATTYRDELAKQGIIFCSFSEAIQSHPELVRQY 187
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L TVVP DNF+AALN+AV +DG+FVYIPKGVRCPMELSTYFRIN TGQFERT++IAD
Sbjct: 188 LGTVVPANDNFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFERTILIAD 247
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI NFVT
Sbjct: 248 DDSYVSYIEGCSAPVRDSYQLHAAVVEVIVNKNAEVKYSTVQNWFSGQGSE-GGILNFVT 306
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR C G S++SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A+++G QQ D+GTKM+
Sbjct: 307 KRALCAGDHSRMSWTQSETGSAITWKYPSVILRGDYSVGEFFSVALTSGHQQADTGTKMI 366
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ KNT S I++KGISAG S NTYRG V + A ++RNFTQCDS+LIG++CGAHT PY+
Sbjct: 367 HIGKNTRSTIIAKGISAGHSENTYRGLVKIMPSATNARNFTQCDSMLIGSDCGAHTFPYV 426
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E +N+S LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V LP+EFAVEA
Sbjct: 427 EVRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSALPLEFAVEA 486
Query: 477 QKLIDISLEGSVG 489
QKL+ ISLE SVG
Sbjct: 487 QKLLSISLEHSVG 499
>gi|327439108|dbj|BAK15473.1| ABC-type transport system [Solibacillus silvestris StLB046]
Length = 465
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 289/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ + ++ +GL DI+R IS+ K EP WML++RL A ++ M P W
Sbjct: 7 EIGDYKYGFHDKDVSIFRSERGLTADIVREISSMKEEPQWMLDYRLKALEKFYEMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-DLASLNFDEITYYVKPSEATE-RSWDEVPEEIKATFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K++L G++F A+ E+ ++ KK+ TV+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMKQDLTDLGIVFKDTDSALKENEEIFKKHWGTVIPYTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DE + V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYMPKGVKLDTPLQAYFRINSENMGQFERTLIIVDEDASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW +YN VTKR + W
Sbjct: 238 TNSLHSAVVEIIVKKNAYCRYTTIQNWA-------NNVYNLVTKRTVV-EENGTMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L+GE + G SIAI+ Q +G KM+HLA NT+S IVSK I+
Sbjct: 290 NIGSKLTMKYPACILKGEGARGMTLSIAIAGKGQHQHAGAKMIHLAPNTSSTIVSKSIAK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TY G+V + A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVTYMGQVKFGKNAKGARSNIECDTLIMDNESTSDTIPYNEILNDNVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGVSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|328944932|gb|EGG39090.1| FeS assembly protein SufB [Streptococcus sanguinis SK1087]
Length = 470
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 207/487 (42%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K+EP+WML++RL +Y
Sbjct: 1 MSEERVEPKPIDLGEYKFGFHDDVEPVISTGKGLNEAVIRELSAAKDEPEWMLDFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W I+FDDL YY +S D+V ++ T+EK+GIP E+
Sbjct: 61 EAFKKMPMQTWGP-DLSEINFDDLIYYQKASDKPA-RSWDEVPEKIKETFEKIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G++F A+ E+P+L K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIVFTDTDSALKEYPELFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + +GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENSGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAM 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ + + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|15900754|ref|NP_345358.1| intein-containing protein [Streptococcus pneumoniae TIGR4]
gi|111657214|ref|ZP_01407986.1| hypothetical protein SpneT_02001566 [Streptococcus pneumoniae
TIGR4]
gi|14972343|gb|AAK74998.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
Length = 470
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 213/487 (43%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVY 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|125718744|ref|YP_001035877.1| ABC transporter permease [Streptococcus sanguinis SK36]
gi|323350407|ref|ZP_08086070.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|125498661|gb|ABN45327.1| ABC-type Fe-S cluster assembly transporter, permease component,
putative [Streptococcus sanguinis SK36]
gi|322123344|gb|EFX95022.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|324989893|gb|EGC21835.1| FeS assembly protein SufB [Streptococcus sanguinis SK353]
gi|324992345|gb|EGC24266.1| FeS assembly protein SufB [Streptococcus sanguinis SK405]
gi|324996132|gb|EGC28043.1| FeS assembly protein SufB [Streptococcus sanguinis SK678]
gi|325686782|gb|EGD28807.1| FeS assembly protein SufB [Streptococcus sanguinis SK72]
gi|325689089|gb|EGD31097.1| FeS assembly protein SufB [Streptococcus sanguinis SK115]
gi|325695650|gb|EGD37550.1| FeS assembly protein SufB [Streptococcus sanguinis SK150]
gi|325697562|gb|EGD39448.1| FeS assembly protein SufB [Streptococcus sanguinis SK160]
gi|327460574|gb|EGF06909.1| FeS assembly protein SufB [Streptococcus sanguinis SK1]
gi|327468251|gb|EGF13736.1| FeS assembly protein SufB [Streptococcus sanguinis SK330]
gi|327472302|gb|EGF17733.1| FeS assembly protein SufB [Streptococcus sanguinis SK408]
gi|327488931|gb|EGF20728.1| FeS assembly protein SufB [Streptococcus sanguinis SK1058]
gi|332359193|gb|EGJ37014.1| FeS assembly protein SufB [Streptococcus sanguinis SK49]
gi|332365488|gb|EGJ43248.1| FeS assembly protein SufB [Streptococcus sanguinis SK1059]
gi|332366180|gb|EGJ43935.1| FeS assembly protein SufB [Streptococcus sanguinis SK355]
Length = 470
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 207/487 (42%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K+EP+WML++RL +Y
Sbjct: 1 MSEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEAVIRELSAAKDEPEWMLDFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W I+FDDL YY +S D+V ++ T+EK+GIP E+
Sbjct: 61 EAFKKMPMQTWGP-DLSEINFDDLIYYQKASDKPA-RSWDEVPEKIKETFEKIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G++F A+ E+P+L K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIVFTDTDSALKEYPELFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + +GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENSGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAM 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ + + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|227488874|ref|ZP_03919190.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51867]
gi|227091296|gb|EEI26608.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium glucuronolyticum ATCC 51867]
Length = 469
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 199/482 (41%), Positives = 288/482 (59%), Gaps = 17/482 (3%)
Query: 9 DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
D++ + +Y YG+ + A KGL+E+++R ISA KNEP+WMLE RL A +
Sbjct: 4 DEIIQSMSSKYSYGWHDSDDAGQAAKKGLDEEVVRTISATKNEPEWMLEQRLKALEIFEK 63
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P W IDFD+ Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 64 KPIPKWGP-DLSFIDFDEFKYFVRSTEKPAAS-WEDLPDDIRNTYDKLGIPEAEKQRLV- 120
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V +E+L++ GVIF+ + + EHPDL K+Y TVVP GDN
Sbjct: 121 -----AGVAAQYESEVVYHQIREDLEEKGVIFLDMDSGLREHPDLFKEYFGTVVPAGDNK 175
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
++ALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+YV Y+EGC
Sbjct: 176 FSALNAAVWSGGSFIYVPKGVHVEIPLQAYFRINTESMGQFERTLIIVDEGAYVHYVEGC 235
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP + LHAAVVE++ +NA +Y+T+QNW + N VT+R C
Sbjct: 236 TAPIYKADALHAAVVEIIVKENARCRYTTIQNW-------SNNVLNLVTQRSRCEA-GGT 287
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS I KYP+ L GE + G S A + Q D+G KM+HLA +T+S IV
Sbjct: 288 MEWVDGNIGSKICMKYPAVWLAGEYASGSVLSAAFAGEGQIQDTGAKMVHLAPHTSSNIV 347
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK ++ YRG V ++ A HS + +CD+LL+ + T PY + +N +L H
Sbjct: 348 SKSVARSGGRAAYRGLVQINANAHHSTSNVECDALLVDEISRSDTYPYNDIRNDHVSLGH 407
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT S++S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EGS
Sbjct: 408 EATVSQVSEDQLFYLMARGLAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGS 467
Query: 488 VG 489
VG
Sbjct: 468 VG 469
>gi|149175399|ref|ZP_01854020.1| hypothetical protein PM8797T_18084 [Planctomyces maris DSM 8797]
gi|148845667|gb|EDL60009.1| hypothetical protein PM8797T_18084 [Planctomyces maris DSM 8797]
Length = 470
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 194/486 (39%), Positives = 287/486 (59%), Gaps = 19/486 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFE--TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+T + +D+ +Y+YGF T+ V KGLN ++ IS KNEP WM ++RL ++
Sbjct: 2 DTNSENENVDIGEYQYGFHDPTDKYVFTGQKGLNAAVVAQISEMKNEPAWMRDFRLKSFE 61
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P W I++ D++Y+ +S +DV ++ +TY++LGIP E++
Sbjct: 62 IFEQKPTPQWGG-NLNEINYQDIHYFVRASEGQE-RSWEDVPDDIRKTYDRLGIPEAEKK 119
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+G V A ++S V + +E+L K GV+F A+ EHP+L ++Y ++P
Sbjct: 120 FLSG-------VKAQYESEVVYGSLQEDLAKQGVLFTDTDSALKEHPELFREYFGKIIPP 172
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN +AALNSAV++ GSFVY+P GV L YFRIN + GQFERTL+I DEG+ Y
Sbjct: 173 DDNKFAALNSAVWSGGSFVYVPPGVHIEFPLQAYFRINSENMGQFERTLVIVDEGASCHY 232
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP N LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 233 VEGCTAPTYSSNSLHSAVVEIIVKKGGRFRYTTIQNW-------SNNVYNLVTKRAHAY- 284
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
S + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A NT+
Sbjct: 285 EDSLMEWVDGNLGSKLTMKYPAIFLMGEGARGETLSIAFAGKGQHQDAGAKMVHCAPNTS 344
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRI+SK IS ++YRG V V A ++ CD+LL+ + T PYIE +++
Sbjct: 345 SRIISKSISKDGGRSSYRGLVKVDPEAHGCKSNVVCDALLLDPESRSDTYPYIEIEDNDV 404
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEA+ SKI +E LFY + RG+ E A ++IV GF+ ++++LPME+AVE +LI++
Sbjct: 405 AIEHEASVSKIGEEQLFYLMSRGLTEAEASSMIVTGFIEPLVKELPMEYAVEMNRLIELQ 464
Query: 484 LEGSVG 489
+EGS+G
Sbjct: 465 MEGSIG 470
>gi|94984580|ref|YP_603944.1| FeS assembly protein SufB [Deinococcus geothermalis DSM 11300]
gi|94554861|gb|ABF44775.1| Iron-regulated ABC transporter membrane component SufB [Deinococcus
geothermalis DSM 11300]
Length = 467
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 196/473 (41%), Positives = 293/473 (61%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
QY+YG+ + KAPKGL+ +++ IS K+EP WML++RL A +L+ P+W
Sbjct: 12 QYEYGWSNPERYAVKAPKGLSREVVEMISKAKDEPQWMLDFRLKALDIFLSKPMPTWG-A 70
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
++FD++YYY P+ +S DDV ++ +T+E+LGIP E++ LAG V
Sbjct: 71 DLSGLNFDEIYYYIKPEGYNA-RSWDDVPEDVKQTFERLGIPEAERKALAG-------VG 122
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE +K GV+F+ I + + ++PDL +++ +TV+P DN +AA+NSAV+
Sbjct: 123 AQYESEMVYHNLKEEWEKLGVVFLSIEDGLKQYPDLFREHFATVIPPEDNKFAAINSAVW 182
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSFVY+PKGV+ + L TYFRIN + +GQFERTLII DEG+ Y+EGCTAP +
Sbjct: 183 SGGSFVYVPKGVKVDIPLQTYFRINAESSGQFERTLIIVDEGAQAHYIEGCTAPTYASDS 242
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
H+ V+E++ + A +YST+QNW +YN VT+R + W G
Sbjct: 243 FHSGVIEIIVKEGARFRYSTIQNW-------SHNVYNLVTQRAAVY-RNGVMEWVDGNLG 294
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C L E + GE SIA++ Q D+G K++H A +T+ IVSK IS
Sbjct: 295 SKVTMKYPACYLLEEGARGEVLSIAMAGRGQHQDAGAKIVHFAPHTSGTIVSKSISKDSG 354
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
++YRG V ++ GA S+ +CD+LL+ T PYIE + ++ HEAT SKI+D
Sbjct: 355 RSSYRGLVKIYEGAYGSKTNVECDALLLDEEARTDTYPYIEIEEKDASVGHEATVSKIND 414
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E + Y RG+ E+ A LIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 415 EQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 467
>gi|313890352|ref|ZP_07823984.1| FeS assembly protein SufB [Streptococcus pseudoporcinus SPIN 20026]
gi|313121338|gb|EFR44445.1| FeS assembly protein SufB [Streptococcus pseudoporcinus SPIN 20026]
Length = 472
Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats.
Identities = 208/489 (42%), Positives = 292/489 (59%), Gaps = 20/489 (4%)
Query: 4 VRETVDKVRK--IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ ET D V ID+ Y++GF ++Q + KGL+E ++R +SA K EP WML++RL
Sbjct: 1 MSETNDMVEPNPIDLGDYQFGFHDDVQPLYSTGKGLSEAVVRELSAAKGEPQWMLDFRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+ + M +W I+FDD+ YY +S DDV ++ T+E++GIP
Sbjct: 61 SLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPEKIKETFERIGIPQA 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG A ++S V K+E +K G+IF A+ E+PDL K+Y + +
Sbjct: 119 ERAYLAGAS-------AQYESEVVYHNMKDEFEKLGIIFTDTDSALKEYPDLFKRYFAKL 171
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 172 VPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGAS 231
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 VHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAR 284
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 285 AL-QDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNAP 343
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T+S IVSK I+ G YRG+V+ + + S + +CD++L+ + + TIP+ E N
Sbjct: 344 HTSSSIVSKSIAKGGGKVDYRGQVTFNSNSKKSVSHIECDTILMDDISKSDTIPFNEIHN 403
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLTENEATEMIVMGFVEPFTKELPMEYAVELNRLI 463
Query: 481 DISLEGSVG 489
+EGSVG
Sbjct: 464 AYEMEGSVG 472
>gi|227496301|ref|ZP_03926597.1| ABC superfamily ATP binding cassette transporter involved in Fe-S
cluster assembly (permease protein) [Actinomyces
urogenitalis DSM 15434]
gi|226834170|gb|EEH66553.1| ABC superfamily ATP binding cassette transporter involved in Fe-S
cluster assembly (permease protein) [Actinomyces
urogenitalis DSM 15434]
Length = 479
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 194/482 (40%), Positives = 285/482 (59%), Gaps = 17/482 (3%)
Query: 9 DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
D++ QY +G+ + A +GL+E ++R ISA K EP+WML RL AY +
Sbjct: 14 DEIIDSISTQYDFGWHDSDEAGANAKRGLDEQVVREISAIKGEPEWMLAKRLKAYEIFER 73
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+W + +D D + YY DD+ ++ TY+++GIP E+E L
Sbjct: 74 KPMPTWG-VDLSELDMDSVKYYVRSTDKPASS-WDDLPDDIRSTYDRIGIPEAERERLV- 130
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V +E+L+K GVIF+ A+ E+P+LV++Y +VVP GDN
Sbjct: 131 -----AGVAAQYESEVVYHQIREDLEKQGVIFVDTDTAVREYPELVQEYFGSVVPAGDNK 185
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADE SYV Y+EGC
Sbjct: 186 FAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYVHYVEGC 245
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP + LH+A+VE+V NA ++Y+T+QNW ++N VT+R C +
Sbjct: 246 TAPIYSTDSLHSAIVEIVVKKNARVRYTTIQNW-------SSNVWNLVTQRATC-AEGAT 297
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS KYP+ L G + GE SIA + Q D+G KM+H+A T+S IV
Sbjct: 298 MEWVDGNIGSKRNMKYPAVYLMGPHARGEALSIAFAGEGQHQDTGAKMVHMAPYTSSHIV 357
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK ++ + YRG V + + A HS++ CD+LL+ + T PY++ + + H
Sbjct: 358 SKSVARHGGRSGYRGLVQIMKNARHSKSNVLCDALLVDEISRSDTYPYVDVRTDDVEMGH 417
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT SK+S + LFY +QRG+ E A+A IV GFV + ++LPME+A+E +LI++ +E S
Sbjct: 418 EATVSKVSADQLFYLMQRGLTETEAMATIVRGFVEPIARELPMEYALELNRLIELQMENS 477
Query: 488 VG 489
VG
Sbjct: 478 VG 479
>gi|157149700|ref|YP_001450990.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074494|gb|ABV09177.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
Length = 470
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 207/487 (42%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K+EP+WMLE+RL +Y
Sbjct: 1 MSEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEAVIRELSAAKDEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W I+FDDL YY +S D+V ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWGP-DLSEINFDDLIYYQKASDKPA-RSWDEVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G++F A+ E+P+L K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIVFTDTDSALKEYPELFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + +GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENSGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAM 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANSNQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ + + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFAKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|289435672|ref|YP_003465544.1| FeS assembly protein SufB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171916|emb|CBH28462.1| FeS assembly protein SufB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313632098|gb|EFR99190.1| FeS assembly protein SufB [Listeria seeligeri FSL N1-067]
Length = 464
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF + V + +GL E ++R IS K+EP+WMLE+RL + ++ M P+W
Sbjct: 6 EIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKDEPEWMLEFRLKSLEQFYKMPMPTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ F+D+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 66 GG-DLSELKFEDITYYVKP-SEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K++L+ G++F A+ E+ D+ ++Y + V+P DN +AALNS
Sbjct: 120 ---AQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFREYFAKVIPPTDNKFAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P G++ L YFRIN + GQFERTLII DE + V+Y+EGCTAP
Sbjct: 177 AVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYT 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW +YN VTKR C + + W
Sbjct: 237 TNSLHSAVVEIIVKPGAYCRYTTIQNWA-------NNVYNLVTKRTFC-EENATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LRGE + G SIAI+ Q+ D+G KM+H A NT+S IVSK IS
Sbjct: 289 NIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
N TYRG V R A +R+ +CD+L++ N + TIPY E NS+ +LEHEA SK
Sbjct: 349 QGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 409 VSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 464
>gi|116873774|ref|YP_850555.1| FeS assembly protein SufB [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742652|emb|CAK21776.1| FeS assembly protein SufB [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 464
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 292/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF + V + +GL E ++R IS K+EP+WMLE+RL + ++ M P+W
Sbjct: 6 EIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKDEPEWMLEFRLKSLEQFYKMPMPTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ F+D+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 66 GG-DLSELKFEDITYYVKP-SEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K++L+ G++F A+ E+ D+ K+Y + V+P DN +AALNS
Sbjct: 120 ---AQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P G++ L YFRIN + GQFERTLII DE + V+Y+EGCTAP
Sbjct: 177 AVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYT 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW +YN VTKR C + + W
Sbjct: 237 TNSLHSAVVEIIVKPGAYCRYTTIQNWA-------NNVYNLVTKRTFC-EENATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LRGE + G SIAI+ Q+ D+G KM+H A NT+S IVSK IS
Sbjct: 289 NIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
N TYRG V R A +R+ +CD+L++ N + TIPY E NS+ +LEHEA SK
Sbjct: 349 QGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 409 VSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 464
>gi|329943894|ref|ZP_08292164.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328531533|gb|EGF58372.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 479
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 198/486 (40%), Positives = 289/486 (59%), Gaps = 17/486 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
R T D++ Y +G+ + ++A +GL+E ++R ISA K EP+WML RL AY
Sbjct: 10 RSTDDEIIDSISTSYDFGWHDSDEAGERAKRGLDEQVVREISAIKGEPEWMLAKRLKAYS 69
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W + +D D + YY S DD+ ++ TY+++GIP E+E
Sbjct: 70 TFERKPMPTWG-VDLSQLDMDAVKYYVRSTDRPA-NSWDDLPEDIKNTYDRIGIPEAERE 127
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V + +L++ GVIF+ A+ E+P+LVK+Y TVVP
Sbjct: 128 RLV------AGVAAQYESEVVYHQIRGDLEEQGVIFVDTDTAVREYPELVKEYFGTVVPA 181
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADE SYV Y
Sbjct: 182 GDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYVHY 241
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP + LH+A+VE+V NA ++Y+T+QNW +YN VT+R C
Sbjct: 242 VEGCTAPIYSTDSLHSAIVEIVVKKNARVRYTTIQNW-------SNNVYNLVTQRATC-E 293
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + W GS KYP+ L G + GE SIA + Q D+G KM+H+A +T+
Sbjct: 294 EGATMEWVDGNIGSKRNMKYPAVFLMGPHARGEALSIAFAGADQHQDTGAKMVHMAPHTS 353
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSK I+ + YRG V + + A HS++ CD+LL+ + T PY++ +
Sbjct: 354 SHIVSKSIARHGGRSAYRGLVQIMKNARHSKSNVLCDALLVDEISRSDTYPYVDVRTDDV 413
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+ HEAT SK+S + LFY +QRG+ E A+A IV GFV + ++LPME+A+E +LI++
Sbjct: 414 EMGHEATVSKVSADQLFYLMQRGLTETEAMATIVRGFVEPIARELPMEYALELNRLIELQ 473
Query: 484 LEGSVG 489
+E SVG
Sbjct: 474 MENSVG 479
>gi|262283278|ref|ZP_06061044.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
gi|262260769|gb|EEY79469.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
Length = 470
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 207/487 (42%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K+EP+WML++RL +Y
Sbjct: 1 MSEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEAVIRELSAAKDEPEWMLDFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W I+FDDL YY +S D+V ++ T+EK+GIP E+
Sbjct: 61 EAFKKMPMQTWGP-DLSEINFDDLIYYQKASDKPA-RSWDEVPEKIKETFEKIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G++F A+ E+P+L K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIVFTDTDSALKEYPELFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + +GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENSGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAM 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ + + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFAKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|148993685|ref|ZP_01823132.1| FeS assembly protein SufB [Streptococcus pneumoniae SP9-BS68]
gi|147927765|gb|EDK78788.1| FeS assembly protein SufB [Streptococcus pneumoniae SP9-BS68]
Length = 470
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 212/487 (43%), Positives = 296/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +I +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVICELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|327462874|gb|EGF09196.1| FeS assembly protein SufB [Streptococcus sanguinis SK1057]
Length = 470
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 207/487 (42%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K+EP+WML++RL +Y
Sbjct: 1 MSEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEAVIRELSAVKDEPEWMLDFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W I+FDDL YY +S D+V ++ T+EK+GIP E+
Sbjct: 61 EAFKKMPMQTWGP-DLSEINFDDLIYYQKASDKPA-RSWDEVPEKIKETFEKIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G++F A+ E+P+L K+Y + +VP
Sbjct: 119 AYLAGAA-------AQYESEVVYHNMKEEFQKLGIVFTDTDSALKEYPELFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + +GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDVPLQTYFRINNENSGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRARAM 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANTNQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ + + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFGKNSQKSVSHIECDTIIMDDISASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|167042164|gb|ABZ06897.1| putative uncharacterized protein family (UPF0051) [uncultured
marine crenarchaeote HF4000_ANIW93H17]
Length = 466
Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 200/482 (41%), Positives = 291/482 (60%), Gaps = 19/482 (3%)
Query: 10 KVRKIDVDQYKYGFETNIQVD--KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+D+D KY F+ + ++ + KGL++D +R IS K+EP+WML++RL AY ++
Sbjct: 2 ATENLDMDYSKYDFKDDTEMYVHLSKKGLSKDTVRSISKLKDEPEWMLDFRLRAYDVFMK 61
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P W IDF +++YYA ++ DDV + T++KLGIP E++ LAG
Sbjct: 62 KPMPQWGG-DLNKIDFQNIFYYAKASEKTE-KNWDDVPENIKNTFDKLGIPEAEKKFLAG 119
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V + +E+L K GV+F+ A+ E P+L KKY + ++P DN
Sbjct: 120 -------VGAQYESEVVYHSLREDLAKQGVLFLDTDTALKEQPELFKKYFAKIIPPEDNK 172
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAV++ GSF+YIP GV+ M L YFRIN + GQFERTLIIADEGS + Y+EGC
Sbjct: 173 FAALNSAVWSGGSFIYIPPGVKVDMPLQAYFRINAENIGQFERTLIIADEGSEIHYIEGC 232
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP LH AVVEL+A +A+++Y+T+QNW +YN VTKR +
Sbjct: 233 TAPVYSSESLHVAVVELLAHKDAKLRYTTIQNW-------SNDVYNLVTKRAYAY-EGAT 284
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYP L G ++ GE S+A + Q D+G KM+HLA +TTS++
Sbjct: 285 VEWIDGNIGSKLTMKYPGIYLMGRKAYGETLSVAFAGKNQHQDTGAKMIHLAPDTTSKVT 344
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK +S +TYRG + V +GA + + +CD+LL+ + T PY+E + H
Sbjct: 345 SKSVSRANGRSTYRGLLKVAKGATNVKATVRCDALLLDDTAKTDTYPYMEIDQEDATVTH 404
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT KI DE +FY + RG E+ A++LIVNGF+ ++LPME+AVE +LI + ++ S
Sbjct: 405 EATVGKIGDEQIFYLMSRGFSEDEALSLIVNGFMEPFTKELPMEYAVELNRLIKLEMDNS 464
Query: 488 VG 489
VG
Sbjct: 465 VG 466
>gi|15674464|ref|NP_268638.1| hypothetical protein SPy_0290 [Streptococcus pyogenes M1 GAS]
gi|71910060|ref|YP_281610.1| ABC transporter [Streptococcus pyogenes MGAS5005]
gi|13621562|gb|AAK33359.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71852842|gb|AAZ50865.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS5005]
Length = 472
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 205/490 (41%), Positives = 293/490 (59%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ + ID+ Y++GF +++ + KGL+E ++R +SA KNEP+WMLE+RL
Sbjct: 1 MSDINEKVE-PKPIDLGDYQFGFHDDVEPIYSTGKGLSEAVVRELSAAKNEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W I+FDD+ YY +S DDV ++ T++++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPEKIKETFDRIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K E +K G+IF A+ E+PDL K+Y +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKGEFEKLGIIFTDTDSALKEYPDLFKQYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAAWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 284 RAL-TDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKSGGKVDYRGQVTFNKQSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|269837552|ref|YP_003319780.1| FeS assembly protein SufB [Sphaerobacter thermophilus DSM 20745]
gi|269786815|gb|ACZ38958.1| FeS assembly protein SufB [Sphaerobacter thermophilus DSM 20745]
Length = 467
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 198/473 (41%), Positives = 293/473 (61%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+YKYGF + + V ++ KGL+ +++ IS K EP+WM ++RL A + P+W
Sbjct: 12 EYKYGFRDDAEPVFRSRKGLDREVVIQISEMKGEPEWMRDFRLKALEYFEKRPVPTWG-A 70
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
++FDD+YYY G +S D+V + +T+++LGIP E++ LAG V
Sbjct: 71 DLSGLNFDDIYYYVRASERQG-RSWDEVPEYIKKTFDRLGIPEAERKFLAG-------VG 122
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V + +E+L+K GVIF+ + A+ EHPDLVK+Y T++P DN +AALNSAV+
Sbjct: 123 AQYESEVVYHSLREDLEKMGVIFLDMDSAVREHPDLVKQYFGTIIPPNDNKFAALNSAVW 182
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSFVY+PKGV+ + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 183 SGGSFVYVPKGVKVEVPLQAYFRINSENMGQFERTLIIVDEGAYVHYVEGCTAPTYSTAS 242
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LH+AVVE++ + +Y+T+QNW +YN VTKR + + W G
Sbjct: 243 LHSAVVEIIVKEGGRCRYTTIQNW-------SKNVYNLVTKRAAAY-KNATMEWVDGNLG 294
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+ L + GE S+A + Q D+G KM+H+A +T+S+I+SK IS
Sbjct: 295 SKVTMKYPAVWLMEPGARGEVLSVAFAADGQHQDTGAKMVHVAPHTSSQIISKSISKESG 354
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
+YRG V VH+GA ++ CD+LL+ T PY+E + ++ HEAT SK+++
Sbjct: 355 RASYRGLVKVHKGAHDVKSNVVCDALLLDETSRTDTYPYMEIEEERVSIGHEATVSKVAE 414
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E LFY RGI E A+++IV+GF+ + ++LP+E+AVE +LI + +EGSVG
Sbjct: 415 EQLFYLQSRGISEADAMSMIVSGFIEPIAKELPLEYAVELNRLIQLEMEGSVG 467
>gi|313793925|gb|EFS41949.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA1]
gi|315079570|gb|EFT51563.1| FeS assembly protein SufB [Propionibacterium acnes HL053PA2]
gi|327452051|gb|EGE98705.1| FeS assembly protein SufB [Propionibacterium acnes HL092PA1]
Length = 482
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 195/472 (41%), Positives = 288/472 (61%), Gaps = 17/472 (3%)
Query: 19 YKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKYG+ + A +GL+ED++R ISA K+EP WML+ RL A + + P+W +
Sbjct: 27 YKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPTWG-VD 85
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
IDFD + Y+ + +D+ ++ TY++LGIP E++ L V A
Sbjct: 86 ISTIDFDQIKYFVRAQERQAAS-WEDLPADIKNTYDRLGIPEAEKDRLV------AGVAA 138
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++S V EEL K GV+F+ A+ E P+L +++ ++ VP+GDN ++ALNSAV++
Sbjct: 139 QYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWS 198
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
GSF+Y+PKGV C + L YFR+N + GQFERTLII DEG+YV Y+EGCTAP + L
Sbjct: 199 GGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSL 258
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H+AVVE++ NA +Y+T+QNW +YN VT+R + W GS
Sbjct: 259 HSAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTQRAYV-EEGGTMEWIDGNIGS 310
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
KYP+C L G + GE S+A + Q D+G KM+H A T+S IVSK IS G
Sbjct: 311 KANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHKAPYTSSTIVSKSISQGGGR 370
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ YRG VSV + A HS + +CD+LL+ + + T PY + + ++ HEAT SK+S++
Sbjct: 371 SAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAHEATVSKVSED 430
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ EE A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 QLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|146319525|ref|YP_001199237.1| ABC transporter permease [Streptococcus suis 05ZYH33]
gi|146321722|ref|YP_001201433.1| ABC transporter permease [Streptococcus suis 98HAH33]
gi|145690331|gb|ABP90837.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05ZYH33]
gi|145692528|gb|ABP93033.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 98HAH33]
gi|292559141|gb|ADE32142.1| FeS assembly protein SufB [Streptococcus suis GZ1]
Length = 494
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 210/488 (43%), Positives = 292/488 (59%), Gaps = 19/488 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETN-IQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ E + ID+ +YK+GF ++ V KGLNE++IR +S K EP+WMLE+RL +
Sbjct: 24 MSEERIEPTPIDLGEYKFGFHDENVELVASTGKGLNEEVIREMSRIKGEPEWMLEFRLKS 83
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y + M +W +DFDD+ YY P +S DDV ++ T+E++GIP E
Sbjct: 84 YETFKKMPMQTWG-ADLSELDFDDIVYYQKPSDKPA-RSWDDVPDKIKETFERIGIPEAE 141
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ LAG A ++S V KEE K G+IF A+ EHP+L KKY +V
Sbjct: 142 RAYLAGAS-------AQYESEVVYHNMKEEYDKHGIIFTDTDTALKEHPELFKKYFGKLV 194
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN +GTGQFERTLII DEG+ V
Sbjct: 195 PPSDNKLAALNSAVWSGGTFIYVPKGVKLDIPLQTYFRINNEGTGQFERTLIIVDEGASV 254
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP LHAA+VE++A + A ++Y+T+QNW +YN VTKR
Sbjct: 255 HYVEGCTAPTYSTASLHAAIVEIIAHEGAYMRYTTIQNW-------SDNVYNLVTKRARA 307
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W G+ T KYP+ L GE + G SIA +N Q D+G KM+H A
Sbjct: 308 -EKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTMLSIAFANKGQVQDTGAKMIHNAPR 366
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IVSK I+ G YRG+V+ + +A S + +CD++++ + + TIP+ E NS
Sbjct: 367 TSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIECDTIIMDDISKSDTIPFNEIHNS 426
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 427 QVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLIA 486
Query: 482 ISLEGSVG 489
+EGSVG
Sbjct: 487 YEMEGSVG 494
>gi|29141702|ref|NP_805044.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213053496|ref|ZP_03346374.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428572|ref|ZP_03361322.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213581033|ref|ZP_03362859.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
gi|213852802|ref|ZP_03382334.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|29137330|gb|AAO68893.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 495
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 290/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LE EATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|320547988|ref|ZP_08042269.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
gi|320447334|gb|EFW88096.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
Length = 472
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 205/490 (41%), Positives = 292/490 (59%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V + ID+ Y+YGF ++ V KG++E+++R +SA+K EP+WMLE+RL
Sbjct: 1 MPEKNEKV-TPKPIDLGDYQYGFHDDVTPVFSTEKGISEEVVRELSAEKGEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W IDFD++ YY +S +DV ++ T+E++GIP
Sbjct: 60 KSLEIFNKMPMQDWGP-DLSDIDFDEITYYQKASDKPA-RSWEDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K+E K G+IF A+ E+P+L KKY S
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKDEYDKLGIIFTDTDSALKEYPELFKKYFSK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINRESMGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ AL+ + ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPNYSSASLHAAIVEIFALEGSYMRYSTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTILMDDISSSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|85059410|ref|YP_455112.1| cysteine desulfurase activator complex subunit SufB [Sodalis
glossinidius str. 'morsitans']
gi|84779930|dbj|BAE74707.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 495
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 279/506 (55%), Positives = 371/506 (73%), Gaps = 28/506 (5%)
Query: 1 MVAVRETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M R +D + + ++YK GF T + ++ G++ED++R ISA+++EP+WMLE+RL
Sbjct: 1 MA--RSNIDTTQPWVKSERYKEGFFTQLATEELAHGISEDVVRAISARRDEPEWMLEFRL 58
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DD 103
AYR WL M +P W + +Y ++++D YY+AP + +
Sbjct: 59 NAYRAWLEMDEPHWLKAKYKPLNYNDYSYYSAPSCGACDDTCGSQPGSTQQSGAEGAKNY 118
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ + + +LG+P+RE S+VAVDA+FDSVSV TT++ +L + G+IF
Sbjct: 119 LTDEVEQAFNQLGVPVRE--------GSEVAVDAIFDSVSVSTTYRHKLAEKGIIFCSFG 170
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI EHP+LV++YL +VVP DNF+AALNSAV +DG+FVY+PKGV CPMELSTYFRIN
Sbjct: 171 EAIHEHPELVRQYLGSVVPANDNFFAALNSAVASDGTFVYLPKGVLCPMELSTYFRINAA 230
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT++IADEGSYVSY+EGC+AP RD QLHAAVVE++ L +AE+KYSTVQNW+ G
Sbjct: 231 KTGQFERTILIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIVLKDAEVKYSTVQNWFAG 290
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
GGI NFVTKR C G +K+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A++
Sbjct: 291 SEAE-GGILNFVTKRALCAGENAKMSWTQSETGSAITWKYPSVILRGDNSVGEFFSVALT 349
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
NG QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + A ++RNFTQCDS+L
Sbjct: 350 NGRQQADTGTKMIHIGKNTRSTIISKGISAGQSENTYRGLVKIMPTATNARNFTQCDSML 409
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG+ CGAHT PY+E++N++ LEHEATTS+I ++ LFYC QRGI E+ AI++IVNGF ++
Sbjct: 410 IGSECGAHTFPYVEARNNTAQLEHEATTSRIGEDQLFYCRQRGISEDDAISMIVNGFCKD 469
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQ+L+ ISLE SVG
Sbjct: 470 VFSELPLEFAVEAQRLLAISLEHSVG 495
>gi|289426378|ref|ZP_06428121.1| FeS assembly protein SufB [Propionibacterium acnes SK187]
gi|295131098|ref|YP_003581761.1| FeS assembly protein SufB [Propionibacterium acnes SK137]
gi|289153106|gb|EFD01824.1| FeS assembly protein SufB [Propionibacterium acnes SK187]
gi|291377089|gb|ADE00944.1| FeS assembly protein SufB [Propionibacterium acnes SK137]
gi|313763533|gb|EFS34897.1| FeS assembly protein SufB [Propionibacterium acnes HL013PA1]
gi|313773472|gb|EFS39438.1| FeS assembly protein SufB [Propionibacterium acnes HL074PA1]
gi|313801313|gb|EFS42564.1| FeS assembly protein SufB [Propionibacterium acnes HL110PA2]
gi|313811524|gb|EFS49238.1| FeS assembly protein SufB [Propionibacterium acnes HL083PA1]
gi|313813417|gb|EFS51131.1| FeS assembly protein SufB [Propionibacterium acnes HL025PA1]
gi|313816715|gb|EFS54429.1| FeS assembly protein SufB [Propionibacterium acnes HL059PA1]
gi|313829456|gb|EFS67170.1| FeS assembly protein SufB [Propionibacterium acnes HL063PA2]
gi|313831265|gb|EFS68979.1| FeS assembly protein SufB [Propionibacterium acnes HL007PA1]
gi|313834876|gb|EFS72590.1| FeS assembly protein SufB [Propionibacterium acnes HL056PA1]
gi|313839964|gb|EFS77678.1| FeS assembly protein SufB [Propionibacterium acnes HL086PA1]
gi|314914689|gb|EFS78520.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA4]
gi|314919351|gb|EFS83182.1| FeS assembly protein SufB [Propionibacterium acnes HL050PA1]
gi|314920740|gb|EFS84571.1| FeS assembly protein SufB [Propionibacterium acnes HL050PA3]
gi|314930620|gb|EFS94451.1| FeS assembly protein SufB [Propionibacterium acnes HL067PA1]
gi|314954424|gb|EFS98830.1| FeS assembly protein SufB [Propionibacterium acnes HL027PA1]
gi|314957492|gb|EFT01595.1| FeS assembly protein SufB [Propionibacterium acnes HL002PA1]
gi|314963722|gb|EFT07822.1| FeS assembly protein SufB [Propionibacterium acnes HL082PA1]
gi|314968450|gb|EFT12548.1| FeS assembly protein SufB [Propionibacterium acnes HL037PA1]
gi|314974141|gb|EFT18237.1| FeS assembly protein SufB [Propionibacterium acnes HL053PA1]
gi|314976569|gb|EFT20664.1| FeS assembly protein SufB [Propionibacterium acnes HL045PA1]
gi|314984388|gb|EFT28480.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA1]
gi|315081200|gb|EFT53176.1| FeS assembly protein SufB [Propionibacterium acnes HL078PA1]
gi|315095280|gb|EFT67256.1| FeS assembly protein SufB [Propionibacterium acnes HL038PA1]
gi|315100355|gb|EFT72331.1| FeS assembly protein SufB [Propionibacterium acnes HL046PA1]
gi|327328457|gb|EGE70219.1| FeS assembly protein SufB [Propionibacterium acnes HL096PA2]
gi|327334192|gb|EGE75906.1| FeS assembly protein SufB [Propionibacterium acnes HL097PA1]
gi|327444245|gb|EGE90899.1| FeS assembly protein SufB [Propionibacterium acnes HL043PA2]
gi|327444876|gb|EGE91530.1| FeS assembly protein SufB [Propionibacterium acnes HL043PA1]
gi|327454912|gb|EGF01567.1| FeS assembly protein SufB [Propionibacterium acnes HL087PA3]
gi|327457802|gb|EGF04457.1| FeS assembly protein SufB [Propionibacterium acnes HL083PA2]
gi|328755254|gb|EGF68870.1| FeS assembly protein SufB [Propionibacterium acnes HL087PA1]
gi|328758266|gb|EGF71882.1| FeS assembly protein SufB [Propionibacterium acnes HL025PA2]
gi|328759986|gb|EGF73569.1| FeS assembly protein SufB [Propionibacterium acnes HL099PA1]
Length = 482
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 196/472 (41%), Positives = 288/472 (61%), Gaps = 17/472 (3%)
Query: 19 YKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKYG+ + A +GL+ED++R ISA K+EP WML+ RL A + + P+W +
Sbjct: 27 YKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPTWG-VD 85
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
IDFD + Y+ + +D+ ++ TY++LGIP E++ L V A
Sbjct: 86 ISTIDFDQIKYFVRAQERQAAS-WEDLPADIKNTYDRLGIPEAEKDRLV------AGVAA 138
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++S V EEL K GV+F+ A+ E P+L +++ ++ VP+GDN ++ALNSAV++
Sbjct: 139 QYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWS 198
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
GSF+Y+PKGV C + L YFR+N + GQFERTLII DEG+YV Y+EGCTAP + L
Sbjct: 199 GGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSL 258
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVE++ NA +Y+T+QNW +YN VT+R + W GS
Sbjct: 259 HAAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTQRAYV-EEGGTMEWIDGNIGS 310
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
KYP+C L G + GE S+A + Q D+G KM+H A T+S IVSK IS G
Sbjct: 311 KANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHKAPYTSSTIVSKSISQGGGR 370
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ YRG VSV + A HS + +CD+LL+ + + T PY + + ++ HEAT SK+S++
Sbjct: 371 SAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAHEATVSKVSED 430
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ EE A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 QLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|227875605|ref|ZP_03993744.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35243]
gi|269977152|ref|ZP_06184125.1| FeS assembly protein SufB [Mobiluncus mulieris 28-1]
gi|306818914|ref|ZP_07452635.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35239]
gi|307700733|ref|ZP_07637758.1| FeS assembly protein SufB [Mobiluncus mulieris FB024-16]
gi|227843790|gb|EEJ53960.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35243]
gi|269934455|gb|EEZ91016.1| FeS assembly protein SufB [Mobiluncus mulieris 28-1]
gi|304648316|gb|EFM45620.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus mulieris ATCC 35239]
gi|307613728|gb|EFN92972.1| FeS assembly protein SufB [Mobiluncus mulieris FB024-16]
Length = 481
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 200/492 (40%), Positives = 295/492 (59%), Gaps = 19/492 (3%)
Query: 1 MVAVRETV--DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEW 57
M + ++ D++ + D+Y++G+ + A +GLNED++R+IS KNEP+WMLE
Sbjct: 6 MSSEQKKRSDDEIIESISDKYEFGWHDSDTAGQAAKRGLNEDVVRYISKMKNEPEWMLET 65
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL + P+W +DFD Y+ V QS DD+ ++ TY++LGI
Sbjct: 66 RLRGLEIFERKPIPAWGP-DLSFLDFDQFKYFVRASDKVA-QSWDDLPEDIKETYDRLGI 123
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P E++ L V A ++S V +E+L+K GVIF+ + EHP++ ++Y
Sbjct: 124 PEAERKRLVD------GVAAQYESEVVYHQIREDLEKQGVIFLDTDTGLKEHPEIFQEYF 177
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP GDN +AALN+AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADE
Sbjct: 178 GKAVPAGDNKFAALNTAVWSGGSFIYVPKGVQCEIPLQAYFRINTESMGQFERTLIIADE 237
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+YV Y+EGCTAP + LHAA+VE+ NA ++Y+T+QNW + N VT+
Sbjct: 238 GAYVHYVEGCTAPIYKSDSLHAAIVEIFVKKNARVRYTTIQNW-------SNNVLNLVTQ 290
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R + + W GS I KYPS L G + GE SIA + Q D+G KM+H
Sbjct: 291 RAIA-EEGATMEWVDGNIGSRINMKYPSVYLTGPHARGEALSIAFAGKGQYQDTGAKMIH 349
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A NT+S IVSK IS + YRG V++ + A+ S++ CD+LL+ + T PY++
Sbjct: 350 FAPNTSSHIVSKSISRQGGRSAYRGLVAIDKKASGSKSNVLCDALLVDTISRSDTYPYVD 409
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N + HEAT SK+S++ LFY + RG+ E A++ IV GFV + ++LPME+A+E
Sbjct: 410 VRNDEVEMGHEATVSKVSEDQLFYLMSRGLTETEAMSTIVRGFVEPIAKELPMEYALELN 469
Query: 478 KLIDISLEGSVG 489
+LI++ +EGSVG
Sbjct: 470 RLIELQMEGSVG 481
>gi|315655550|ref|ZP_07908449.1| FeS assembly protein SufB [Mobiluncus curtisii ATCC 51333]
gi|315490205|gb|EFU79831.1| FeS assembly protein SufB [Mobiluncus curtisii ATCC 51333]
Length = 496
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 201/482 (41%), Positives = 297/482 (61%), Gaps = 17/482 (3%)
Query: 9 DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
D++ + D+Y++G+ + A +GL+ED++R+IS K+EP+WML+ RL A + +
Sbjct: 31 DEIIESISDKYEFGWHDSDAAGQAAKRGLDEDVVRYISKMKDEPEWMLKLRLKALKIFQR 90
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+W +DFD+ Y+ V QS DD+ ++ +TY++LGIP E++ L
Sbjct: 91 KPIPNWGP-DLSFLDFDEFKYFVRAADKVA-QSWDDLPEDIKQTYDRLGIPEAERQRLVD 148
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V +E+L+K GVIF+ + E+P+L ++Y VP GDN
Sbjct: 149 ------GVAAQYESEVVYHQIREDLEKQGVIFLDTDTGLKEYPELFQEYFGRAVPAGDNK 202
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALN+AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADEGSYV Y+EGC
Sbjct: 203 FAALNTAVWSGGSFIYVPKGVQCTVPLQAYFRINTESMGQFERTLIIADEGSYVHYVEGC 262
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP + LHAA+VE+ NA ++Y+T+QNW + N VT+R C +
Sbjct: 263 TAPIYQSDSLHAAIVEIFVRKNARVRYTTIQNW-------SNNVLNLVTQRAFC-EEGAT 314
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS I KYPS L GE + GE SIA + Q D+G+KMLH A +T+S IV
Sbjct: 315 MEWIDGNIGSRINMKYPSVYLLGEHAHGETLSIAFAGKGQHQDTGSKMLHRAPHTSSHIV 374
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK IS ++YRG V + + A S++ CD+LL+ + T PY++ +N + H
Sbjct: 375 SKSISRQGGRSSYRGLVDIAQNATGSKSNVLCDALLVDTISRSDTYPYVDVRNDEVEMGH 434
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT SK+S++ LFY + RG+ E A+A IV GFV + ++LPME+A+E +LI++ +EGS
Sbjct: 435 EATVSKVSEDQLFYLMSRGLTETEAMATIVRGFVEPIAKELPMEYALELNRLIELQMEGS 494
Query: 488 VG 489
VG
Sbjct: 495 VG 496
>gi|315108960|gb|EFT80936.1| FeS assembly protein SufB [Propionibacterium acnes HL030PA2]
Length = 482
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 196/472 (41%), Positives = 288/472 (61%), Gaps = 17/472 (3%)
Query: 19 YKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKYG+ + A +GL+ED++R ISA K+EP WML+ RL A + + P+W +
Sbjct: 27 YKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPTWG-VD 85
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
IDFD + Y+ + +D+ ++ TY++LGIP E++ L V A
Sbjct: 86 ISTIDFDQIKYFVRAQERQAAS-WEDLPADIKNTYDRLGIPEAEKDRL------GAGVAA 138
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++S V EEL K GV+F+ A+ E P+L +++ ++ VP+GDN ++ALNSAV++
Sbjct: 139 QYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWS 198
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
GSF+Y+PKGV C + L YFR+N + GQFERTLII DEG+YV Y+EGCTAP + L
Sbjct: 199 GGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSL 258
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVE++ NA +Y+T+QNW +YN VT+R + W GS
Sbjct: 259 HAAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTQRAYV-EEGGTMEWIDGNIGS 310
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
KYP+C L G + GE S+A + Q D+G KM+H A T+S IVSK IS G
Sbjct: 311 KANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHKAPYTSSTIVSKSISQGGGR 370
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ YRG VSV + A HS + +CD+LL+ + + T PY + + ++ HEAT SK+S++
Sbjct: 371 SAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAHEATVSKVSED 430
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ EE A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 QLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|16760537|ref|NP_456154.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|25317711|pir||AB0703 conserved hypothetical protein STY1753 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502833|emb|CAD01995.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 495
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 289/504 (57%), Positives = 371/504 (73%), Gaps = 24/504 (4%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I ++PDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDYPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+CGAHT PY+E +N+S LE EATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ADCGAHTFPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
+LP+EFAVEAQKL+ ISLE SVG
Sbjct: 472 SELPLEFAVEAQKLLAISLEHSVG 495
>gi|299822013|ref|ZP_07053900.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Listeria grayi DSM 20601]
gi|299816641|gb|EFI83878.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Listeria grayi DSM 20601]
Length = 464
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 207/476 (43%), Positives = 294/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++D+Y+YGF + V + +GL D++R IS K EP+WML++RL + ++ M P W
Sbjct: 6 EIDEYQYGFHDKDTSVFRTERGLTADVVREISKIKEEPEWMLDFRLKSLEQFYKMPMPQW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ F+D+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 66 GG-DLSELKFEDITYYVKP-SDHTVKSWDEVPEEIKRTFDKLGIPEAEQKYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KE+L++ G++F A+ E+ D+ K+Y S V+P DN +AALNS
Sbjct: 120 ---AQYESEVVYHNMKEDLEELGIVFKDTDSALKENEDIFKEYFSKVIPPSDNKFAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLI+ DEG+ V+Y+EGCTAP
Sbjct: 177 AVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIVVDEGASVNYVEGCTAPVYT 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW +YN VTKR C + + W
Sbjct: 237 TNSLHSAVVEIIVKPNAYCRYTTIQNWA-------NNVYNLVTKRTFC-EENATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LRGE + G SIAI+ Q+ D+G KM+H A NT+S IVSK IS
Sbjct: 289 NIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
N TYRG V R A +R+ +CD+L++ + TIPY E N++ +LEHEA SK
Sbjct: 349 QGGNVTYRGIVHFGRNADGARSNIECDTLIMDQASTSDTIPYNEILNNNISLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 409 VSEEQLFYLMSRGLSEQEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 464
>gi|16801568|ref|NP_471836.1| hypothetical protein lin2506 [Listeria innocua Clip11262]
gi|16804449|ref|NP_465934.1| hypothetical protein lmo2411 [Listeria monocytogenes EGD-e]
gi|46908582|ref|YP_014971.1| FeS assembly protein SufB [Listeria monocytogenes serotype 4b str.
F2365]
gi|47092992|ref|ZP_00230772.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47095891|ref|ZP_00233495.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|217963489|ref|YP_002349167.1| FeS assembly protein SufB [Listeria monocytogenes HCC23]
gi|224500145|ref|ZP_03668494.1| FeS assembly protein SufB [Listeria monocytogenes Finland 1988]
gi|224503441|ref|ZP_03671748.1| FeS assembly protein SufB [Listeria monocytogenes FSL R2-561]
gi|226224959|ref|YP_002759066.1| hypothetical protein Lm4b_02380 [Listeria monocytogenes Clip81459]
gi|254825468|ref|ZP_05230469.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254827986|ref|ZP_05232673.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254853587|ref|ZP_05242935.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254900451|ref|ZP_05260375.1| hypothetical protein LmonJ_11572 [Listeria monocytogenes J0161]
gi|254913311|ref|ZP_05263323.1| FeS assembly protein SufB [Listeria monocytogenes J2818]
gi|254933164|ref|ZP_05266523.1| FeS assembly protein SufB [Listeria monocytogenes HPB2262]
gi|254937691|ref|ZP_05269388.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|254992001|ref|ZP_05274191.1| hypothetical protein LmonocytoFSL_02034 [Listeria monocytogenes FSL
J2-064]
gi|255028542|ref|ZP_05300493.1| hypothetical protein LmonL_03861 [Listeria monocytogenes LO28]
gi|255522180|ref|ZP_05389417.1| hypothetical protein LmonocFSL_13340 [Listeria monocytogenes FSL
J1-175]
gi|284802849|ref|YP_003414714.1| hypothetical protein LM5578_2606 [Listeria monocytogenes 08-5578]
gi|284995990|ref|YP_003417758.1| hypothetical protein LM5923_2555 [Listeria monocytogenes 08-5923]
gi|290893713|ref|ZP_06556694.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|300765261|ref|ZP_07075246.1| FeS assembly protein SufB [Listeria monocytogenes FSL N1-017]
gi|16411899|emb|CAD00489.1| lmo2411 [Listeria monocytogenes EGD-e]
gi|16415028|emb|CAC97733.1| lin2506 [Listeria innocua Clip11262]
gi|46881854|gb|AAT05148.1| FeS assembly protein SufB [Listeria monocytogenes serotype 4b str.
F2365]
gi|47015768|gb|EAL06697.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|47018646|gb|EAL09399.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|217332759|gb|ACK38553.1| FeS assembly protein SufB [Listeria monocytogenes HCC23]
gi|225877421|emb|CAS06135.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258600369|gb|EEW13694.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258606960|gb|EEW19568.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|258610294|gb|EEW22902.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284058411|gb|ADB69352.1| hypothetical protein LM5578_2606 [Listeria monocytogenes 08-5578]
gi|284061457|gb|ADB72396.1| hypothetical protein LM5923_2555 [Listeria monocytogenes 08-5923]
gi|290556786|gb|EFD90319.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|293584722|gb|EFF96754.1| FeS assembly protein SufB [Listeria monocytogenes HPB2262]
gi|293591314|gb|EFF99648.1| FeS assembly protein SufB [Listeria monocytogenes J2818]
gi|293594710|gb|EFG02471.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514082|gb|EFK41144.1| FeS assembly protein SufB [Listeria monocytogenes FSL N1-017]
gi|307571937|emb|CAR85116.1| FeS assembly protein [Listeria monocytogenes L99]
gi|313607053|gb|EFR83587.1| FeS assembly protein SufB [Listeria monocytogenes FSL F2-208]
gi|313617393|gb|EFR89796.1| FeS assembly protein SufB [Listeria innocua FSL S4-378]
gi|328465275|gb|EGF36532.1| FeS assembly protein SufB [Listeria monocytogenes 1816]
gi|328471335|gb|EGF42232.1| FeS assembly protein SufB [Listeria monocytogenes 220]
gi|332312840|gb|EGJ25935.1| FeS cluster assembly protein sufB [Listeria monocytogenes str.
Scott A]
Length = 464
Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 291/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF + V + +GL E ++R IS K EP+WMLE+RL + ++ M P+W
Sbjct: 6 EIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKMPMPTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ F+D+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 66 GG-DLSELKFEDITYYVKP-SEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K++L+ G++F A+ E+ D+ K+Y + V+P DN +AALNS
Sbjct: 120 ---AQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P G++ L YFRIN + GQFERTLII DE + V+Y+EGCTAP
Sbjct: 177 AVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYT 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW +YN VTKR C + + W
Sbjct: 237 TNSLHSAVVEIIVKPGAYCRYTTIQNWA-------NNVYNLVTKRTFC-EENATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LRGE + G SIAI+ Q+ D+G KM+H A NT+S IVSK IS
Sbjct: 289 NIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
N TYRG V R A +R+ +CD+L++ N + TIPY E NS+ +LEHEA SK
Sbjct: 349 QGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 409 VSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 464
>gi|158313920|ref|YP_001506428.1| FeS assembly protein SufB [Frankia sp. EAN1pec]
gi|158109325|gb|ABW11522.1| FeS assembly protein SufB [Frankia sp. EAN1pec]
Length = 470
Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats.
Identities = 190/490 (38%), Positives = 293/490 (59%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + + Y++G+ + +GL+E ++R ISAKKNEP WM + RL
Sbjct: 1 MTTSAET--ALEGL--GSYRFGWADADAYAVDVERGLSEAVVRSISAKKNEPSWMTDLRL 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W I FD++ Y+ + D+ E+ TY++LGIP
Sbjct: 57 KGLKLFERKPMPTWG-ADLSGIHFDNIKYFVRSTEKQA-EEWADLPEEIRATYDRLGIPE 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ + EHP++ ++Y +
Sbjct: 115 AEKQRLI------SGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPEIFQEYFGS 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN++V++ GSF+Y+P GV+ + L YFRIN + GQFERTLII DEG+
Sbjct: 169 VIPVGDNKFAALNTSVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V NA +Y+T+QNW +YN VTKR
Sbjct: 229 YVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARCRYTTIQNW-------SNNVYNLVTKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ L GEQ+ GE SIA + Q D+G KM+H A
Sbjct: 282 ACH-EGATMEWIDGNIGSKVTMKYPAVWLLGEQAHGEVLSIAFAGEGQHQDAGAKMVHAA 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S+IVSK ++ G +YRG V ++ G+ SR+ +CD+LL+ + T PY++ +
Sbjct: 341 PRTSSKIVSKSVARGGGRTSYRGLVQINEGSHASRSTVKCDALLVDTVSRSDTYPYVDVR 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA+ SK+ ++ LFY + RG+ E+ A+A++V GF+ V ++LPME+A+E +L
Sbjct: 401 EDDASIGHEASVSKVGEDQLFYLMSRGLSEDEAMAMVVRGFIEPVARELPMEYALELNRL 460
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 461 IELQMEGAVG 470
>gi|298347008|ref|YP_003719695.1| ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063]
gi|304389285|ref|ZP_07371250.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315656537|ref|ZP_07909424.1| FeS assembly protein SufB [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298237069|gb|ADI68201.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus curtisii ATCC 43063]
gi|304327403|gb|EFL94636.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315492492|gb|EFU82096.1| FeS assembly protein SufB [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 496
Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats.
Identities = 201/482 (41%), Positives = 296/482 (61%), Gaps = 17/482 (3%)
Query: 9 DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
D++ + D+Y++G+ + A +GL+ED++R+IS K+EP+WML+ RL A + +
Sbjct: 31 DEIIESISDKYEFGWHDSDAAGQAAKRGLDEDVVRYISKMKDEPEWMLKLRLKALKIFQR 90
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+W +DFD+ Y+ V QS DD+ ++ +TY++LGIP E++ L
Sbjct: 91 KPIPNWGP-DLSFLDFDEFKYFVRAADKVA-QSWDDLPEDIKQTYDRLGIPEAERQRLVD 148
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V +E+L+K GVIF+ + E+P+L ++Y VP GDN
Sbjct: 149 ------GVAAQYESEVVYHQIREDLEKQGVIFLDTDTGLKEYPELFQEYFGRAVPAGDNK 202
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALN+AV++ GSF+Y+PKGV+C + L YFRIN + GQFERTLIIADEGSYV Y+EGC
Sbjct: 203 FAALNTAVWSGGSFIYVPKGVQCTVPLQAYFRINTESMGQFERTLIIADEGSYVHYVEGC 262
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP + LHAA+VE+ NA ++Y+T+QNW + N VT+R C +
Sbjct: 263 TAPIYQSDSLHAAIVEIFVRKNARVRYTTIQNW-------SNNVLNLVTQRAFC-EEGAT 314
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS I KYPS L GE + GE SIA + Q D+G+KMLH A +T+S IV
Sbjct: 315 MEWIDGNIGSRINMKYPSVYLLGEHAHGETLSIAFAGKGQHQDTGSKMLHRAPHTSSHIV 374
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK IS ++YRG V + A S++ CD+LL+ + T PY++ +N + H
Sbjct: 375 SKSISRQGGRSSYRGLVDIAENATGSKSNVLCDALLVDTISRSDTYPYVDVRNDEVEMGH 434
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT SK+S++ LFY + RG+ E A+A IV GFV + ++LPME+A+E +LI++ +EGS
Sbjct: 435 EATVSKVSEDQLFYLMSRGLTETEAMATIVRGFVEPIAKELPMEYALELNRLIELQMEGS 494
Query: 488 VG 489
VG
Sbjct: 495 VG 496
>gi|332522485|ref|ZP_08398737.1| FeS assembly protein SufB [Streptococcus porcinus str. Jelinkova
176]
gi|332313749|gb|EGJ26734.1| FeS assembly protein SufB [Streptococcus porcinus str. Jelinkova
176]
Length = 472
Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats.
Identities = 207/489 (42%), Positives = 292/489 (59%), Gaps = 20/489 (4%)
Query: 4 VRETVDKVRK--IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ ET D V ID+ Y++GF ++Q + KGL+E I+R +SA K EP WML++RL
Sbjct: 1 MSETNDMVEPNPIDLGDYQFGFHDDVQPLYSTGKGLSEAIVRELSAAKGEPKWMLDFRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+ + M +W I+FDD+ YY +S DDV ++ T+E++GIP
Sbjct: 61 SLETFNKMPMQTWG-ADLSDINFDDIIYYQKASDKPA-RSWDDVPEKIKETFERIGIPQA 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+ LAG A ++S V K+E +K G+IF A+ E+PDL K+Y + +
Sbjct: 119 ERAYLAGAS-------AQYESEVVYHNMKDEFEKLGIIFTDTDSALKEYPDLFKRYFAKL 171
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP +N AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 172 VPPTNNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGAS 231
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP N LHAA+VE+ AL+ A ++Y+T+QNW +YN VTKR
Sbjct: 232 VHYVEGCTAPTYSSNSLHAAIVEIFALEGAYMRYTTIQNW-------SDNVYNLVTKRAR 284
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W G+ T KYPS L G + G SIA +N Q D+G KM+H A
Sbjct: 285 AL-QDATVEWIDGNLGAKTTMKYPSVYLDGPGARGTMLSIAFANAGQHQDTGAKMIHNAP 343
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T+S IVSK I+ G YRG+V+ + + S + +CD++L+ + + TIP+ E N
Sbjct: 344 HTSSSIVSKSIAKGGGKVDYRGQVTFNPNSKKSVSHIECDTILMDDISKSDTIPFNEIHN 403
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 SQVALEHEAKVSKISEEQLYYLMSRGLTESEATEMIVMGFVEPFTKELPMEYAVELNRLI 463
Query: 481 DISLEGSVG 489
+EGSVG
Sbjct: 464 AYEMEGSVG 472
>gi|297172432|gb|ADI23406.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [uncultured gamma proteobacterium
HF0770_28K04]
Length = 466
Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats.
Identities = 202/482 (41%), Positives = 291/482 (60%), Gaps = 19/482 (3%)
Query: 10 KVRKIDVDQYKYGFETNIQVD--KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+D+D KY F+ + ++ + KGL++D +R IS K+EP+WML++RL AY ++
Sbjct: 2 ATENLDMDYSKYDFKDSTEMYVHLSKKGLSKDTVREISKLKDEPEWMLDFRLRAYDVFMK 61
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P W IDF +++YYA ++ DDV + T++KLGIP E++ LAG
Sbjct: 62 KPMPQWGG-DLNKIDFQNIFYYAKASEKTE-KNWDDVPENVKNTFDKLGIPEAEKKFLAG 119
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V + +E+L K GV+F+ A+ E P+L KKY + ++P DN
Sbjct: 120 -------VGAQYESEVVYHSLREDLAKQGVLFLDTDTALKEQPELFKKYFAKIIPPEDNK 172
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAV++ GSF+YIP GV+ M L YFRIN + GQFERTLIIADEGS V Y+EGC
Sbjct: 173 FAALNSAVWSGGSFIYIPPGVKVDMPLQAYFRINAENIGQFERTLIIADEGSEVHYIEGC 232
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP LH AVVEL+A +A+++Y+T+QNW +YN VTKR +
Sbjct: 233 TAPVYSSESLHVAVVELLAHKDAKLRYTTIQNW-------SNDVYNLVTKRAYAY-EGAT 284
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYP L G ++ GE SIA + Q D+G KM+HLA +TTS++
Sbjct: 285 VEWIDGNIGSKLTMKYPGIYLMGRKAYGETLSIAFAGKNQHQDTGAKMVHLAPDTTSKVT 344
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK +S +TYRG + V +GA + + +CD+LL+ + T PY+E + H
Sbjct: 345 SKSVSRANGRSTYRGLLKVAKGATNVKATVRCDALLLDDTAKTDTYPYMEIDQEDATVTH 404
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT KI DE +FY + RG E+ A++LIVNGF+ ++LPME+AVE +LI + ++ S
Sbjct: 405 EATVGKIGDEQIFYLMSRGFSEDEALSLIVNGFMEPFTKELPMEYAVELNRLIKLEMDNS 464
Query: 488 VG 489
VG
Sbjct: 465 VG 466
>gi|221231650|ref|YP_002510802.1| FeS assembly protein SufB [Streptococcus pneumoniae ATCC 700669]
gi|220674110|emb|CAR68629.1| FeS assembly protein SufB [Streptococcus pneumoniae ATCC 700669]
Length = 470
Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats.
Identities = 212/487 (43%), Positives = 295/487 (60%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKFY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL +Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFNQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A +T
Sbjct: 285 -KDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E NS
Sbjct: 344 SSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 464 EMEGSVG 470
>gi|300741470|ref|ZP_07071491.1| FeS assembly protein SufB [Rothia dentocariosa M567]
gi|311113561|ref|YP_003984783.1| FeS assembly protein SufB [Rothia dentocariosa ATCC 17931]
gi|300380655|gb|EFJ77217.1| FeS assembly protein SufB [Rothia dentocariosa M567]
gi|310945055|gb|ADP41349.1| FeS assembly protein SufB [Rothia dentocariosa ATCC 17931]
Length = 485
Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 296/475 (62%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ +++ A +GL+E ++R ISAKKNEP WML+ RL A + + P+W
Sbjct: 27 IGNYEYGWADSDEAGQSAKRGLDEAVVRDISAKKNEPQWMLDMRLKALKFFERKPMPTWG 86
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +S +++ ++ TYE+LGIP E+ L
Sbjct: 87 -ADLSDIDFDNIKYFVRSTEGQA-ESWEELPEDIRVTYERLGIPEAERNSLV------AG 138
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + ++P++ K+Y ++++P+GDN ++ALN+A
Sbjct: 139 VAAQYESEVVYHQIREDLESQGVIFVDTDTGLRDYPEIFKEYFASIIPIGDNKFSALNTA 198
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 199 VWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYIEGCTAPVYRS 258
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE+V NA ++Y+T+QNW +YN VTKR + + W
Sbjct: 259 DSLHSAVVEIVVKKNARVRYTTIQNW-------SNNVYNLVTKRAVAH-EGATMEWVDGN 310
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + GE + GE SIA + Q D+G+KM+H+A NT+S IVSK ++
Sbjct: 311 IGSKVTQKYPAVYMVGEHAKGETLSIAFAGEGQHQDTGSKMVHIAPNTSSTIVSKSVARN 370
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ YRG V V GA HS++ CD+LL+ + T PY++ + + HEAT S++
Sbjct: 371 GGRSAYRGLVQVREGAKHSKSSVVCDALLVDTVSRSDTYPYVDVREDDVTMGHEATVSRV 430
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY +QRG+ E+ A+A+IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 431 SEEQLFYLMQRGLAEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGSVG 485
>gi|313836749|gb|EFS74463.1| FeS assembly protein SufB [Propionibacterium acnes HL037PA2]
gi|314929844|gb|EFS93675.1| FeS assembly protein SufB [Propionibacterium acnes HL044PA1]
gi|314972272|gb|EFT16369.1| FeS assembly protein SufB [Propionibacterium acnes HL037PA3]
gi|328907701|gb|EGG27465.1| FeS assembly protein SufB [Propionibacterium sp. P08]
Length = 482
Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats.
Identities = 195/472 (41%), Positives = 288/472 (61%), Gaps = 17/472 (3%)
Query: 19 YKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKYG+ + A +GL+ED++R ISA K+EP WML+ RL A + + P+W +
Sbjct: 27 YKYGWHDSDAYAAASQRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPTWG-VD 85
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
IDFD + Y+ + +D+ ++ TY++LGIP E++ L V A
Sbjct: 86 ISTIDFDQIKYFVRAQERQAAS-WEDLPADIKNTYDRLGIPEAEKDRLV------AGVAA 138
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++S V EEL K GV+F+ A+ E P+L +++ ++ VP+GDN ++ALNSAV++
Sbjct: 139 QYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFASTVPLGDNKFSALNSAVWS 198
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
GSF+Y+PKGV C + L YFR+N + GQFERTLII DEG+YV Y+EGCTAP + L
Sbjct: 199 GGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSL 258
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVE++ NA +Y+T+QNW +YN VT+R + W GS
Sbjct: 259 HAAVVEIIVKRNARCRYTTIQNW-------SNNVYNLVTQRAYV-EEGGTMEWIDGNIGS 310
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
KYP+C L G + GE S+A + Q D+G KM+H A T+S IVSK IS G
Sbjct: 311 KANMKYPACYLMGPHAKGEALSVAFAAEGQHQDTGAKMVHNAPYTSSTIVSKSISQGGGR 370
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ YRG V+V + A HS + +CD+LL+ + + T PY + + ++ HEAT SK+S++
Sbjct: 371 SAYRGLVAVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAHEATVSKVSED 430
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ EE A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 QLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|261416737|ref|YP_003250420.1| FeS assembly protein SufB [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373193|gb|ACX75938.1| FeS assembly protein SufB [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325462|gb|ADL24663.1| FeS assembly protein SufB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 471
Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats.
Identities = 282/475 (59%), Positives = 364/475 (76%), Gaps = 6/475 (1%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+ YKYGF T+I+ + KGLNEDIIR SA + EP +ML++RL AY + TM+ P+W
Sbjct: 2 SENYKYGFVTDIENEAFEKGLNEDIIRRASALRGEPQFMLDFRLRAYEKLKTMEQPNWGE 61
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+ + +D D+ YY+APK+ + ++DVDPELL T+EKLGIP+ EQ+ LA VAV
Sbjct: 62 LHFNPVDLQDIVYYSAPKTKKSHEKIEDVDPELLATFEKLGIPLDEQKRLA-----NVAV 116
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFDSVS+ T+ K++L + G+IF IS+AI E+P+L+++YL +VVP GDN++AALNSAV
Sbjct: 117 DAVFDSVSIYTSHKKKLMEMGIIFCSISDAIKEYPELIEEYLGSVVPAGDNYFAALNSAV 176
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F DGSFVYIP GV+CPM+LSTYFRIN K GQFERTLIIAD+ + VSYLEGCTAP+
Sbjct: 177 FGDGSFVYIPPGVKCPMDLSTYFRINNKEAGQFERTLIIADDDASVSYLEGCTAPEFSSK 236
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQ-GKGGIYNFVTKRGDCRGMRSKISWTQLE 314
QLH+A+VELVA +NA+IKYSTVQNWY GD + G GG+YNFVTKRG C G S+ISWTQ+E
Sbjct: 237 QLHSAIVELVAKENAKIKYSTVQNWYAGDRETGAGGVYNFVTKRGKCAGKNSRISWTQVE 296
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
TGSAITWKYPSC+L+G+ S GEFYS+A++NG Q D+GTKM+H+ KNT S I+SKGISA
Sbjct: 297 TGSAITWKYPSCILQGDNSVGEFYSVALTNGHMQADTGTKMIHIGKNTKSTIISKGISAD 356
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
S+N YRG+VS+ + A +RN+TQCDS+L+G AHT PYI N+S EHEATTS+I
Sbjct: 357 CSSNAYRGEVSIRKSATGARNYTQCDSMLVGTKSAAHTFPYITVANASAQTEHEATTSRI 416
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY RGI E AI +V GF ++V ++LP EFA EA++L+ + LE SVG
Sbjct: 417 SEDQLFYFESRGIKREDAIQAMVGGFCKDVFKELPGEFATEARQLLTLKLEHSVG 471
>gi|288920555|ref|ZP_06414861.1| FeS assembly protein SufB [Frankia sp. EUN1f]
gi|288348048|gb|EFC82319.1| FeS assembly protein SufB [Frankia sp. EUN1f]
Length = 470
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 186/490 (37%), Positives = 294/490 (60%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + + Y++G+ +T+ +GL+E ++R ISAKK+E WM + RL
Sbjct: 1 MTTSAET--ALEGL--GSYRFGWADTDAYAVDVERGLSEAVVRSISAKKSEQSWMTDLRL 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ D++ ++ TY++LGIP
Sbjct: 57 KGLKLFERKPMPTWG-ADLSGIDFDNIKYFVRSTEKQAAD-WDELPEDIRATYDRLGIPE 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ + EHP++ ++Y +
Sbjct: 115 AEKQRLI------AGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPEIFQEYFGS 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN+AV++ GSF+Y+P GV+ + L YFRIN + GQFERTLII DEG+
Sbjct: 169 VIPVGDNKFAALNTAVWSGGSFIYVPPGVQVEIPLQAYFRINTENMGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V NA +Y+T+QNW +YN VTKR
Sbjct: 229 YVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARCRYTTIQNW-------SNNVYNLVTKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C + + W GS +T KYP+ + GEQ+ GE S+A + Q D+G KM+H A
Sbjct: 282 ACH-EGATMEWIDGNIGSKVTMKYPAVWMLGEQAHGEVLSVAFAGEGQHQDAGAKMVHAA 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S IVSK ++ G +YRG V ++ G+ +++ +CD+LL+ + T PY++ +
Sbjct: 341 PRTSSTIVSKSVARGGGRTSYRGLVQINEGSHSAKSTVKCDALLVDTVSRSDTYPYVDVR 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA+ SK+ ++ LFY + RG+ EE A+A++V GF+ + ++LPME+A+E +L
Sbjct: 401 EDDASIGHEASVSKVGEDQLFYLMSRGLSEEEAMAMVVRGFIEPIARELPMEYALELNRL 460
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 461 IELQMEGAVG 470
>gi|289428765|ref|ZP_06430448.1| FeS assembly protein SufB [Propionibacterium acnes J165]
gi|289158163|gb|EFD06383.1| FeS assembly protein SufB [Propionibacterium acnes J165]
gi|313808007|gb|EFS46488.1| FeS assembly protein SufB [Propionibacterium acnes HL087PA2]
gi|313819574|gb|EFS57288.1| FeS assembly protein SufB [Propionibacterium acnes HL046PA2]
gi|313822102|gb|EFS59816.1| FeS assembly protein SufB [Propionibacterium acnes HL036PA1]
gi|313823664|gb|EFS61378.1| FeS assembly protein SufB [Propionibacterium acnes HL036PA2]
gi|313825988|gb|EFS63702.1| FeS assembly protein SufB [Propionibacterium acnes HL063PA1]
gi|314924685|gb|EFS88516.1| FeS assembly protein SufB [Propionibacterium acnes HL036PA3]
gi|314962144|gb|EFT06245.1| FeS assembly protein SufB [Propionibacterium acnes HL002PA2]
gi|314978976|gb|EFT23070.1| FeS assembly protein SufB [Propionibacterium acnes HL072PA2]
gi|314986579|gb|EFT30671.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA2]
gi|314990936|gb|EFT35027.1| FeS assembly protein SufB [Propionibacterium acnes HL005PA3]
gi|315083566|gb|EFT55542.1| FeS assembly protein SufB [Propionibacterium acnes HL027PA2]
gi|315087084|gb|EFT59060.1| FeS assembly protein SufB [Propionibacterium acnes HL002PA3]
gi|315089258|gb|EFT61234.1| FeS assembly protein SufB [Propionibacterium acnes HL072PA1]
gi|327329677|gb|EGE71433.1| FeS assembly protein SufB [Propionibacterium acnes HL096PA3]
gi|327446362|gb|EGE93016.1| FeS assembly protein SufB [Propionibacterium acnes HL013PA2]
gi|328752352|gb|EGF65968.1| FeS assembly protein SufB [Propionibacterium acnes HL020PA1]
gi|332675977|gb|AEE72793.1| conserved hypothetical protein [Propionibacterium acnes 266]
Length = 482
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 195/472 (41%), Positives = 288/472 (61%), Gaps = 17/472 (3%)
Query: 19 YKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKYG+ + A +GL+ED++R ISA K+EP WML+ RL A + + P+W +
Sbjct: 27 YKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPTWG-VD 85
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
IDFD + Y+ + +D+ ++ TY++LGIP E++ L V A
Sbjct: 86 ISTIDFDQIKYFVRAQERQAAS-WEDLPADIKNTYDRLGIPEAEKDRLV------AGVAA 138
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++S V EEL K GV+F+ A+ E P+L +++ ++ VP+GDN ++ALNSAV++
Sbjct: 139 QYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWS 198
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
GSF+Y+PKGV C + L YFR+N + GQFERTLII DEG+YV Y+EGCTAP + L
Sbjct: 199 GGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSL 258
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVE++ NA +Y+T+QNW +YN VT+R + W GS
Sbjct: 259 HAAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTQRAYV-EEGGTMEWIDGNIGS 310
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
KYP+C L G + GE S+A + Q D+G KM+H A T+S IVSK IS G
Sbjct: 311 KANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHKAPYTSSTIVSKSISQGGGR 370
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ YRG VSV + A HS + +CD+LL+ + + T PY + + ++ HEAT SK+S++
Sbjct: 371 SAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAHEATVSKVSED 430
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ EE A+A+IV GF+ + ++LPME+A+E +L+++ +EG+VG
Sbjct: 431 QLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLMELQMEGAVG 482
>gi|254831166|ref|ZP_05235821.1| hypothetical protein Lmon1_07388 [Listeria monocytogenes 10403S]
Length = 464
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF + V + +GL E ++R IS K EP+WMLE+RL + ++ M P+W
Sbjct: 6 EIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKMPMPTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ F+D+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 66 GG-DLSELKFEDITYYVKP-SEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K++L+ G++F A+ E+ + K+Y + V+P DN +AALNS
Sbjct: 120 ---AQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEAIFKEYFAKVIPPSDNKFAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P G++ L YFRIN + GQFERTLII DE + V+Y+EGCTAP
Sbjct: 177 AVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYT 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW +YN VTKR C + + W
Sbjct: 237 TNSLHSAVVEIIVKPGAYCRYTTIQNWA-------NNVYNLVTKRTFC-EENATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LRGE + G SIAI+ Q+ D+G KM+H A NT+S IVSK IS
Sbjct: 289 NIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
N TYRG V R A +R+ +CD+L++ N + TIPY E NS+ +LEHEA SK
Sbjct: 349 QGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 409 VSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 464
>gi|238897306|ref|YP_002922983.1| putative transport protein associated with Fe-S cluster assembly
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229465061|gb|ACQ66835.1| putative transport protein associated with Fe-S cluster assembly
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 500
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 283/509 (55%), Positives = 368/509 (72%), Gaps = 29/509 (5%)
Query: 1 MVAVR-ETVDKVRKIDVD-QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + +T + D + +YK GF T ++ D+ KGLNED++R ISAK+ EP WML++R
Sbjct: 1 MNKKKIDTKEASPIWDNESRYKEGFFTQLKTDELEKGLNEDVVRAISAKRREPQWMLDFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------- 101
L AY WL M +P W + Y +D+ D YY+AP
Sbjct: 61 LDAYDGWLKMSEPHWLKGDYDPLDYQDYSYYSAPSCPSCDDDQFHTYSSSSTDHPSHAGK 120
Query: 102 -DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
++ E+ + +LG+P+RE ++VAVDA+FDSVSV TT++E+L K G+IF
Sbjct: 121 NAYLNSEVESAFAQLGVPVRE--------GAEVAVDAIFDSVSVATTYREKLAKQGIIFC 172
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
+ EAI E+P LV +YL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRI
Sbjct: 173 SLGEAIQEYPQLVCQYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRI 232
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
N TGQFERT+IIADEGSYVSY+EGC+AP R+ +QLHAAVVE++ NAE+KYSTVQNW
Sbjct: 233 NAAKTGQFERTIIIADEGSYVSYIEGCSAPVREASQLHAAVVEVILHKNAEVKYSTVQNW 292
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G GGI NFVTKR C+G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+
Sbjct: 293 FAGSE-TTGGILNFVTKRALCKGAGSKMSWTQSETGSAITWKYPSVILQGDHSIGEFFSV 351
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A++NG QQ D+GTKM+H+ KNT S I+SKGISAG S NTYRG V + GA ++RNFTQCD
Sbjct: 352 ALTNGKQQADTGTKMIHIGKNTKSTIISKGISAGHSQNTYRGLVKILPGAHNARNFTQCD 411
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+LIG++ A+T PY+E KN+S LEHEATTS+I D+ LFYCLQRGI ++ AI+++VNGF
Sbjct: 412 SMLIGSDSAANTFPYVEVKNNSAQLEHEATTSRIGDDQLFYCLQRGISQDDAISMMVNGF 471
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++V +LP+EFAVEAQKL+ I+LE SVG
Sbjct: 472 CKDVFSELPLEFAVEAQKLLAINLEHSVG 500
>gi|32476187|ref|NP_869181.1| iron-regulated ABC transporter [Rhodopirellula baltica SH 1]
gi|32446731|emb|CAD76567.1| conserved hypothetical protein-putative iron-regulated ABC
transporter [Rhodopirellula baltica SH 1]
gi|327537445|gb|EGF24170.1| FeS assembly protein SufB [Rhodopirellula baltica WH47]
Length = 468
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 204/490 (41%), Positives = 288/490 (58%), Gaps = 23/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M D++ +I+ KY F T V KA KGL+ +++ IS KNEPDWM E+RL
Sbjct: 1 MATDVTENDQIGEIN----KYNFRTETTGVFKAQKGLSAEVVNQISDIKNEPDWMREFRL 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + + P W +DF D+YYY P +S DDV E+ T++KLGIP
Sbjct: 57 KSLAEFESRPMPKWGGAL--DLDFQDIYYYLKPTGQSE-KSWDDVPQEIKDTFDKLGIPE 113
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG V A F+S V + +E+L K GV+F A+ EHP+L+++Y
Sbjct: 114 AEKKFLAG-------VKAQFESEVVYGSLQEDLAKQGVLFTDTDTAVREHPELLREYFGK 166
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P DN +AALNSAV++ GSF+Y+P GV+ L YFRIN + GQFERTLII DEG+
Sbjct: 167 VIPPTDNKFAALNSAVWSGGSFIYVPPGVQIEFPLQAYFRINAESMGQFERTLIIVDEGA 226
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ Y+EGCTAP LH+AVVE++ +A +Y+T+QNW IYN VTKR
Sbjct: 227 SIHYVEGCTAPMYTTESLHSAVVEVIVKKDARCRYTTIQNWA-------NNIYNLVTKRA 279
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ + + GE SIA S+ Q D+G K++H A
Sbjct: 280 YAY-QDATMEWVDGNLGSKLTMKYPAVHMMEPGARGEILSIAFSSAGQHQDAGAKLVHAA 338
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NTT +I+SK IS ++YRG V V GA +S+N CD+L++ + T PYIE
Sbjct: 339 PNTTGQIISKSISKNGGRSSYRGLVRVEPGAHNSKNNVVCDALILDPESRSDTYPYIEIA 398
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ HEA+ S+I +E +FY L RG+ E A +IVNGF+ ++++LPME+AVE +L
Sbjct: 399 EQDVQIGHEASVSRIGEEQMFYLLSRGLTESEASTMIVNGFIEPLVKELPMEYAVEMNRL 458
Query: 480 IDISLEGSVG 489
I + +EGSVG
Sbjct: 459 IQLQMEGSVG 468
>gi|223933669|ref|ZP_03625646.1| FeS assembly protein SufB [Streptococcus suis 89/1591]
gi|253752533|ref|YP_003025674.1| hypothetical protein SSUSC84_1690 [Streptococcus suis SC84]
gi|253754359|ref|YP_003027500.1| hypothetical protein SSU1666 [Streptococcus suis P1/7]
gi|253756293|ref|YP_003029433.1| hypothetical protein SSUBM407_1738 [Streptococcus suis BM407]
gi|302024468|ref|ZP_07249679.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05HAS68]
gi|330833494|ref|YP_004402319.1| ABC-type transport system involved in Fe-S cluster assembly,
permease [Streptococcus suis ST3]
gi|223897662|gb|EEF64046.1| FeS assembly protein SufB [Streptococcus suis 89/1591]
gi|251816822|emb|CAZ52466.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818757|emb|CAZ56594.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251820605|emb|CAR47362.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|319758943|gb|ADV70885.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis JS14]
gi|329307717|gb|AEB82133.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis ST3]
Length = 471
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 210/488 (43%), Positives = 292/488 (59%), Gaps = 19/488 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETN-IQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ E + ID+ +YK+GF ++ V KGLNE++IR +S K EP+WMLE+RL +
Sbjct: 1 MSEERIEPTPIDLGEYKFGFHDENVELVASTGKGLNEEVIREMSRIKGEPEWMLEFRLKS 60
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y + M +W +DFDD+ YY P +S DDV ++ T+E++GIP E
Sbjct: 61 YETFKKMPMQTWG-ADLSELDFDDIVYYQKPSDKPA-RSWDDVPDKIKETFERIGIPEAE 118
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ LAG A ++S V KEE K G+IF A+ EHP+L KKY +V
Sbjct: 119 RAYLAGAS-------AQYESEVVYHNMKEEYDKHGIIFTDTDTALKEHPELFKKYFGKLV 171
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN +GTGQFERTLII DEG+ V
Sbjct: 172 PPSDNKLAALNSAVWSGGTFIYVPKGVKLDIPLQTYFRINNEGTGQFERTLIIVDEGASV 231
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP LHAA+VE++A + A ++Y+T+QNW +YN VTKR
Sbjct: 232 HYVEGCTAPTYSTASLHAAIVEIIAHEGAYMRYTTIQNW-------SDNVYNLVTKRARA 284
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W G+ T KYP+ L GE + G SIA +N Q D+G KM+H A
Sbjct: 285 -EKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTMLSIAFANKGQVQDTGAKMIHNAPR 343
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IVSK I+ G YRG+V+ + +A S + +CD++++ + + TIP+ E NS
Sbjct: 344 TSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIECDTIIMDDISKSDTIPFNEIHNS 403
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI
Sbjct: 404 QVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLIA 463
Query: 482 ISLEGSVG 489
+EGSVG
Sbjct: 464 YEMEGSVG 471
>gi|315099161|gb|EFT71137.1| FeS assembly protein SufB [Propionibacterium acnes HL059PA2]
Length = 482
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 196/472 (41%), Positives = 288/472 (61%), Gaps = 17/472 (3%)
Query: 19 YKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKYG+ + A +GL+ED++R ISA K+EP WML+ RL A + + P+W +
Sbjct: 27 YKYGWHDSDAYAAASRRGLSEDVVRGISAMKHEPQWMLDMRLKALKLFQRKPMPTWG-VD 85
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
IDFD + Y+ + +D+ ++ TY++LGIP E++ L V A
Sbjct: 86 ISTIDFDQIKYFVRAQERQAASG-EDLPADIKNTYDRLGIPEAEKDRLV------AGVAA 138
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++S V EEL K GV+F+ A+ E P+L +++ ++ VP+GDN ++ALNSAV++
Sbjct: 139 QYESEVVYHKINEELGKQGVVFLDTDTALKEEPELFREHFASAVPLGDNKFSALNSAVWS 198
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
GSF+Y+PKGV C + L YFR+N + GQFERTLII DEG+YV Y+EGCTAP + L
Sbjct: 199 GGSFIYVPKGVHCTIPLQAYFRMNTENLGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSL 258
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVE++ NA +Y+T+QNW +YN VT+R + W GS
Sbjct: 259 HAAVVEIIVKKNARCRYTTIQNW-------SNNVYNLVTQRAYV-EEGGTMEWIDGNIGS 310
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
KYP+C L G + GE S+A + Q D+G KM+H A T+S IVSK IS G
Sbjct: 311 KANMKYPACYLMGPHAKGEALSVAFAAESQHQDTGAKMVHKAPYTSSTIVSKSISQGGGR 370
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ YRG VSV + A HS + +CD+LL+ + + T PY + + ++ HEAT SK+S++
Sbjct: 371 SAYRGLVSVGKDAHHSSSAVRCDALLVDDISRSDTYPYNDIRTDEVSMAHEATVSKVSED 430
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY +QRG+ EE A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 431 QLFYLMQRGLTEEEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 482
>gi|283782879|ref|YP_003373633.1| FeS assembly protein SufB [Gardnerella vaginalis 409-05]
gi|283442089|gb|ADB14555.1| FeS assembly protein SufB [Gardnerella vaginalis 409-05]
Length = 552
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 296/488 (60%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKI--DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + +I + Y YG+ + + A KG++E ++R ISA KNEP+WML+ RL
Sbjct: 81 EEKIRQDEQIVAEFGDYNYGWHDSDAAGEAAKKGIDESVVRAISADKNEPEWMLDLRLQG 140
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR +L P W + D DD YY P ++ DD+ ++ +TY++LGIP E
Sbjct: 141 YRAFLQKPMPDWG-VDLSGFDADDFKYYVRPVHDQA-KTWDDLPEDIRKTYDRLGIPEAE 198
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+L GVIF+ A+ ++P+LVKKY +TV+
Sbjct: 199 KKRLV------SGVAAQYESEVIYNSIREDLAAQGVIFVDTDTAVQKYPELVKKYFATVI 252
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PV DN +AALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 253 PVDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 312
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LHAA VE+V +A ++Y+TVQNW +YN VT+R
Sbjct: 313 HYVEGCTAPIYSTDSLHAANVEIVVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 365
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S++ + Q D+G KM+HLA +
Sbjct: 366 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLSFAGRGQYQDTGAKMIHLAPH 424
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S + CD+LL+ + + T P+++ +
Sbjct: 425 TSSTIVAKSISRGGGRSAYRGLVKIIKGAKGSSSSVVCDALLVDDFSRSDTYPHVDVRED 484
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 485 DVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 544
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 545 LQMEGSVG 552
>gi|15807100|ref|NP_295829.1| hypothetical protein DR_2106 [Deinococcus radiodurans R1]
gi|6459902|gb|AAF11655.1|AE002046_1 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 468
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 291/475 (61%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+Y+YG+ + KAPKGL+ +++ IS K+EP WML++RL A +L+ P W
Sbjct: 11 NKEYEYGWSDPEKYAIKAPKGLSREVVEMISKAKDEPQWMLDFRLKALDIFLSKPMPEWG 70
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
++ D++YYY P+ +S DDV ++ T+E+LGIP E+ LAG
Sbjct: 71 -ADLSGLNLDEIYYYIKPEGFNA-RSWDDVPEDVKNTFERLGIPEAERAALAG------- 121
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V KEE +K GV+F+ I + + ++PDL +++ +T+VP DN +AA+NSA
Sbjct: 122 VGAQYESEMVYHNLKEEWEKLGVVFLSIEDGMRQYPDLFREHFATIVPPEDNKFAAINSA 181
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVYIPKGV+ + L TYFRIN + +GQFERTLII DEG+ Y+EGCTAP +
Sbjct: 182 VWSGGSFVYIPKGVKVDIPLQTYFRINAESSGQFERTLIIVDEGAQAHYIEGCTAPAYNA 241
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ H+ V+E+V + A +YST+QNW +YN VT+R G + W
Sbjct: 242 DSFHSGVIEIVVKEGARFRYSTIQNW-------SHNVYNLVTQRAAVYG-SGVMEWVDGN 293
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+C L + + GE SIA++ Q D+G K++H A +T+ IVSK IS
Sbjct: 294 LGSKVTMKYPACYLLEDGARGEVLSIAMAGRGQHQDAGAKIVHFAPHTSGTIVSKSISKD 353
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
++YRG V ++ GA S+ +CD+LL+ T PYIE + ++ HEAT SKI
Sbjct: 354 SGRSSYRGLVKIYEGAKGSKTNVECDALLLDEEARTDTYPYIEIEEKDASVGHEATVSKI 413
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+DE + Y RG+ E+ A LIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 414 NDEQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 468
>gi|284006306|emb|CBA71542.1| cysteine desulfurase activator complex subunit [Arsenophonus
nasoniae]
Length = 499
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 287/501 (57%), Positives = 368/501 (73%), Gaps = 25/501 (4%)
Query: 6 ETVDKVRK-IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E D V++ + +YK GF T + D+ KGLNE++I+ ISAK+NEPDWML++RL AY+
Sbjct: 7 EIGDDVQQWLVEHRYKEGFFTQVATDELAKGLNEEVIKAISAKRNEPDWMLQFRLEAYQH 66
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DDVDPEL 108
WL M++P W + YP +++ + YYAAP ++ + + E+
Sbjct: 67 WLGMEEPHWLKGYYPDLNYQEYSYYAAPSCNSCDENCHAEIDSSADESNTHSNNYLTAEV 126
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ KLG+P+RE + VAVDA+FDSVSV TT++ EL K G+IF EAI +
Sbjct: 127 EEAFNKLGVPVREGKS--------VAVDAIFDSVSVSTTYRSELAKLGIIFCSFGEAIQQ 178
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+P+LVKKY+ TVV DNF+AALNSAV +DG+FVY+PKGVRCPMELSTYFRIN TGQF
Sbjct: 179 YPELVKKYIGTVVSNRDNFFAALNSAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQF 238
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
ERT+++ADEGSYVSY+EGC+AP R+ QLHAAVVE++ +AE+KYSTVQNW+ G
Sbjct: 239 ERTILVADEGSYVSYIEGCSAPVRESYQLHAAVVEVIIHKDAEVKYSTVQNWFSGGESET 298
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
GGI NFVTKR C G +K+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG QQ
Sbjct: 299 GGILNFVTKRALCEGENAKMSWTQSETGSAITWKYPSVILQGDNSVGEFFSVALTNGNQQ 358
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN+TQCDS+LIG C
Sbjct: 359 ADTGTKMIHIGKNTHSTIISKGISAGRSQNSYRGLVKILPTAENARNYTQCDSMLIGTEC 418
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
GAHT PYIE KNSS LEHEATTS+I ++ LFYCLQRGI E+ AI++IVNGF ++V KL
Sbjct: 419 GAHTFPYIEVKNSSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSKL 478
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
P+EFAVEAQKL+ ISLE SVG
Sbjct: 479 PLEFAVEAQKLLAISLEHSVG 499
>gi|226314439|ref|YP_002774335.1| iron-sulfur cluster assembly protein SufB [Brevibacillus brevis
NBRC 100599]
gi|226097389|dbj|BAH45831.1| iron-sulfur cluster assembly protein SufB [Brevibacillus brevis
NBRC 100599]
Length = 465
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 203/481 (42%), Positives = 292/481 (60%), Gaps = 18/481 (3%)
Query: 10 KVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
V+ ++ +Y+YGF ++ V + KGL +I+ IS K+EP WMLE+RL A + +M
Sbjct: 2 AVKGPEIQEYQYGFHDKDVSVFRTKKGLTREIVEEISKIKDEPAWMLEFRLKALDIFNSM 61
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P W DFD + YY P G +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 62 PMPKWGGDLDDL-DFDSITYYVKPSEKQG-RSWDEVPEEIKATFDKLGIPEAEQKFLAG- 118
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A ++S V +E+L+K GV+F + A+ HP++VK+Y +TV+P DN +
Sbjct: 119 ------VSAQYESEVVYHNMQEDLEKLGVLFCDMDSAVKLHPEIVKEYFATVIPPADNKF 172
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
+ALNSAV++ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADE S+V Y+EGCT
Sbjct: 173 SALNSAVWSGGSFIYVPKGVKVETPLQAYFRINSENMGQFERTLIIADEDSFVHYVEGCT 232
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP + LH+AVVE++ + A +Y+T+QNW +YN VTKR + +
Sbjct: 233 APIYSTDSLHSAVVEIIVKERARCRYTTIQNW-------SNNVYNLVTKRAVAYAD-ANM 284
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS +T KYP+ +++G ++ G SIA++ Q D+G KM+HLA + TS I+S
Sbjct: 285 EWIDGNIGSKLTMKYPAVIMKGPRAKGTVLSIAVAGKGQHQDAGAKMIHLAPDCTSTIIS 344
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K IS TYRG R + S++ +CD+L++ + TIPY E N S LEHE
Sbjct: 345 KSISRDGGKVTYRGLSQFGRKSEGSKSNIKCDTLILDKLSTSDTIPYNEIMNDSITLEHE 404
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AT SK+S++ LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+
Sbjct: 405 ATVSKVSEDQLFYLMSRGLSEAEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSI 464
Query: 489 G 489
G
Sbjct: 465 G 465
>gi|161528003|ref|YP_001581829.1| FeS assembly protein SufB [Nitrosopumilus maritimus SCM1]
gi|160339304|gb|ABX12391.1| FeS assembly protein SufB [Nitrosopumilus maritimus SCM1]
Length = 466
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 202/482 (41%), Positives = 292/482 (60%), Gaps = 19/482 (3%)
Query: 10 KVRKIDVDQYKYGFETNIQVD--KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+D+D KY F+ + ++ + KGL ++ + IS K+EP WML++RL +Y ++
Sbjct: 2 ATENLDMDYSKYDFKDSTEMYVHLSKKGLTKETVIEISKMKDEPQWMLDFRLRSYEVFMK 61
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+W IDF ++YYYA ++ DDV ++ T++KLGIP E++ LAG
Sbjct: 62 KPMPTWGG-DLSLIDFQNIYYYAKASEKTE-KNWDDVPEDVKNTFDKLGIPEAEKKFLAG 119
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V + +E+L K GV+F+ A+ EHP+L KKY V+P DN
Sbjct: 120 -------VGAQYESEVVYHSLREDLAKQGVLFLDTDAALKEHPELFKKYFGKVIPPEDNK 172
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAV++ GSF+Y+P GV+ M L YFRIN + GQFERTLI+ DEG+ V Y+EGC
Sbjct: 173 FAALNSAVWSGGSFIYVPPGVKVDMPLQAYFRINAENIGQFERTLIVVDEGADVHYIEGC 232
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP LH+AVVELVA +A ++Y+T+QNW +YN VTKR +
Sbjct: 233 TAPVYSSESLHSAVVELVAHKDAHLRYTTIQNW-------SNDVYNLVTKRAYAY-EGAT 284
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYP L GE++ GE SIA + Q D+G KM+H+A NTTS+I
Sbjct: 285 VEWIDGNIGSKLTMKYPGVYLMGERAYGETLSIAFAGKGQHQDTGAKMVHMAPNTTSKIT 344
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK +S +TYRG ++V +GA + ++ +CD+LL+ + T PY+E + H
Sbjct: 345 SKSVSRLDGRSTYRGLLNVAKGATNVKSTVRCDALLLDDTSKTDTYPYMEINQEDATITH 404
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT KI DE +FY + RG EE A++LIVNGF+ ++LPME+AVE +LI + ++ S
Sbjct: 405 EATVGKIGDEQIFYLMSRGFSEEEALSLIVNGFMEPFTKELPMEYAVELNRLIKLEMDDS 464
Query: 488 VG 489
VG
Sbjct: 465 VG 466
>gi|51893176|ref|YP_075867.1| hypothetical protein STH2038 [Symbiobacterium thermophilum IAM
14863]
gi|51856865|dbj|BAD41023.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 466
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 204/483 (42%), Positives = 296/483 (61%), Gaps = 19/483 (3%)
Query: 8 VDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
V + R I V +YKYGF K+ KGL +I+ IS KNEP+WM E RL A+ +
Sbjct: 2 VSQPRDI-VGEYKYGFRDPENYVFKSDKGLTREIVESISRFKNEPEWMREIRLKAFEVFH 60
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+W + AIDF +++Y+ G +S D+V ++ RT+++LGIP E++ LA
Sbjct: 61 AKPLPTWG-VDLSAIDFQNIHYFVRATERQG-RSWDEVPEDIKRTFDRLGIPEAERKFLA 118
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G V A ++S V +++L+ GV+F + A+ E+P +VK+Y TVVP+ DN
Sbjct: 119 G-------VSAQYESEVVYHNIRKDLEAQGVLFCDMDTAVREYPHIVKEYFGTVVPMTDN 171
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLII DEG+ V Y+EG
Sbjct: 172 KFAALNTAVWSGGSFIYVPPGVTVEIPLQAYFRINTENMGQFERTLIIVDEGANVHYVEG 231
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP + LHAAVVE++ +Y+T+QNW +YN VTKR +
Sbjct: 232 CTAPIYSTDSLHAAVVEIIVKKGGRCRYTTIQNW-------STNVYNLVTKRAVAY-DDA 283
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYP+ L G + G+ SIA+++ D+G K+ H A +T+SRI
Sbjct: 284 VMEWVDGNIGSKVTMKYPAIYLMGPGARGDVISIAVASKGMIQDAGAKIYHFAPDTSSRI 343
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
SK IS N TYRG + V A ++ +CD+L+ + +HTIPY++ KNS+ +E
Sbjct: 344 TSKSISREGGNATYRGHILVEPQAERAKVKVECDALIFDDGSESHTIPYMDIKNSNVTIE 403
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEAT SK+S+E LFY + RG+ EE A+A+IV GF+ ++LPME+AVE +LI++ +EG
Sbjct: 404 HEATVSKVSEEQLFYLMSRGLSEEQALAMIVMGFIEPFAKELPMEYAVELNRLIEMEMEG 463
Query: 487 SVG 489
SVG
Sbjct: 464 SVG 466
>gi|284046834|ref|YP_003397174.1| FeS assembly protein SufB [Conexibacter woesei DSM 14684]
gi|283951055|gb|ADB53799.1| FeS assembly protein SufB [Conexibacter woesei DSM 14684]
Length = 477
Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats.
Identities = 208/491 (42%), Positives = 290/491 (59%), Gaps = 20/491 (4%)
Query: 2 VAVRETVDKVRKIDVDQY--KYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
V + ++ I+ D Y ++GF + KAPKG+N +I+ IS K+EP WM E+R
Sbjct: 4 PEVLAEQEALKGINAD-YTERFGFHDAENYLYKAPKGINREIVEKISEFKDEPQWMREFR 62
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A + P W +DF+D++Y+ +S DDV ++ +T+++LGIP
Sbjct: 63 LKALDHFFAHGMPRWGSPMLAELDFEDIHYFVRASERSE-RSWDDVPEDVKKTFDRLGIP 121
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ LAG V A ++S V +L+ GVIF + A+ EHPDL+++Y +
Sbjct: 122 EAERRFLAG-------VGAQYESEVVYHQVHRDLEDQGVIFTDMDTALREHPDLLREYFA 174
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
T++P DN AALNSAV++ GSFVY+P GV M L YFRIN + GQFERTLIIADEG
Sbjct: 175 TIIPPNDNKLAALNSAVWSGGSFVYVPPGVHVEMPLQAYFRINTENMGQFERTLIIADEG 234
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
SYV Y+EGCTAP + LH+AVVEL+A A I+Y+TVQNW +YN VTKR
Sbjct: 235 SYVHYVEGCTAPTYSSDSLHSAVVELIAKPGARIRYTTVQNW-------SQNVYNLVTKR 287
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ + W GS +T KYPS L GE++ GE SIA + Q D+G K++H
Sbjct: 288 AIA-ETDATVEWVDCNLGSKLTMKYPSVYLMGERAHGEILSIAFAGRGQHQDAGGKIIHA 346
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A NTTS I +K IS +YRG + V +GA S++ CD+LL+ + + T P I
Sbjct: 347 APNTTSNIFAKSISKDGGRGSYRGLLEVAKGAHGSKSKVVCDALLLDEDSRSDTYPTIRI 406
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
++ HEAT SKI +E +FY GI EE A LIVNGF+ + ++LPME+AVE +
Sbjct: 407 GEDDVDVGHEATVSKIGEEQVFYLQSHGINEEEASKLIVNGFIEPITKELPMEYAVEMNR 466
Query: 479 LIDISLEGSVG 489
LI++ +EGS+G
Sbjct: 467 LIELQMEGSIG 477
>gi|148654873|ref|YP_001275078.1| FeS assembly protein SufB [Roseiflexus sp. RS-1]
gi|148566983|gb|ABQ89128.1| Iron-regulated ABC transporter membrane component SufB [Roseiflexus
sp. RS-1]
Length = 471
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 200/481 (41%), Positives = 280/481 (58%), Gaps = 20/481 (4%)
Query: 13 KIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+D D KY F + K+ KGLNE ++R +S K EP+WML+ RL A + P
Sbjct: 7 NLDFDYSKYAFRNEERYIFKSEKGLNEKVVRELSGMKGEPEWMLKRRLQALEIFRKKPTP 66
Query: 72 ---SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
WA +++DD++Y+ D V PE+ T+E+LGIP E++ LAG
Sbjct: 67 LTGMWANPELAELNYDDIHYFVRAGERPQTD-WDAVPPEIKNTFERLGIPEAERKFLAG- 124
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A ++S V + +EE K GVIF+ + E+P++ K+Y TVVP DN Y
Sbjct: 125 ------VGAQYESEVVYHSLREEWAKQGVIFLDTDTGLKEYPEIFKQYFGTVVPAADNKY 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLII +EG+ V Y+EGCT
Sbjct: 179 AALNTAVWSGGSFVYVPKGVHVDIPLQAYFRINAENMGQFERTLIIVEEGASVHYIEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP N LH+AVVE++ + + +Y+T+QNW I+N VTKR + +
Sbjct: 239 APIYSTNSLHSAVVEIIVMKGGKCRYTTIQNWA-------NNIFNLVTKRAIAYEE-ASM 290
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS +T KYPS L G + GE S+A + Q D+G KM+H+A +TTSRI +
Sbjct: 291 EWVDGNIGSRLTMKYPSVYLMGRGARGEVLSVAYAGKGQHQDAGAKMVHIAPDTTSRITN 350
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K +S TYRG V GA ++ CD+L++ + TIPYIE + C L HE
Sbjct: 351 KSVSKNGGKTTYRGLAKVAPGATGAKINVNCDALILDEKSASDTIPYIEIEEDRCTLAHE 410
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AT +I +E LFY + RGI E A+++IV GF+ ++LPME+AVE +LI + +EGSV
Sbjct: 411 ATVGRIGEEQLFYLMSRGISEADALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSV 470
Query: 489 G 489
G
Sbjct: 471 G 471
>gi|253316876|ref|ZP_04840089.1| FeS assembly protein SufB [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 465
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 209/476 (43%), Positives = 293/476 (61%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV YKYGF + + + ++ +GL E+I+R IS KNEP+WML++RL + + + M P W
Sbjct: 7 DVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++FDD+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSELNFDDITYYVKP-SEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V ++EL++ G+IF A+ E+ +L KKY ++VVP DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PK ++ L YFRIN + GQFERTLIIADEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE++ +A ++Y+T+QNW +YN VTKR + W
Sbjct: 238 TSSLHSAVVEIIVHKDAHVRYTTIQNWA-------NNVYNLVTKRTFVY-ENGNMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+C+L GE + G SIA + Q D+G KM+H A NT+S I+SK IS
Sbjct: 290 NLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIISKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 NGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|29376887|ref|NP_816041.1| hypothetical protein EF2390 [Enterococcus faecalis V583]
gi|227519889|ref|ZP_03949938.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX0104]
gi|227553924|ref|ZP_03983971.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis HH22]
gi|229545187|ref|ZP_04433912.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX1322]
gi|229549435|ref|ZP_04438160.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis ATCC 29200]
gi|255972139|ref|ZP_05422725.1| FeS assembly protein SufB [Enterococcus faecalis T1]
gi|255975206|ref|ZP_05425792.1| FeS assembly protein SufB [Enterococcus faecalis T2]
gi|256617052|ref|ZP_05473898.1| FeS assembly protein SufB [Enterococcus faecalis ATCC 4200]
gi|256763086|ref|ZP_05503666.1| FeS assembly protein SufB [Enterococcus faecalis T3]
gi|256853753|ref|ZP_05559118.1| FeS assembly protein SufB [Enterococcus faecalis T8]
gi|256956670|ref|ZP_05560841.1| FeS assembly protein SufB [Enterococcus faecalis DS5]
gi|256961313|ref|ZP_05565484.1| FeS assembly protein SufB [Enterococcus faecalis Merz96]
gi|256963559|ref|ZP_05567730.1| FeS assembly protein SufB [Enterococcus faecalis HIP11704]
gi|257079625|ref|ZP_05573986.1| FeS assembly protein SufB [Enterococcus faecalis JH1]
gi|257082029|ref|ZP_05576390.1| FeS assembly protein SufB [Enterococcus faecalis E1Sol]
gi|257084580|ref|ZP_05578941.1| FeS assembly protein SufB [Enterococcus faecalis Fly1]
gi|257087424|ref|ZP_05581785.1| FeS assembly protein SufB [Enterococcus faecalis D6]
gi|257090584|ref|ZP_05584945.1| FeS assembly protein sufB [Enterococcus faecalis CH188]
gi|257416631|ref|ZP_05593625.1| FeS assembly protein SufB [Enterococcus faecalis AR01/DG]
gi|257419847|ref|ZP_05596841.1| FeS assembly protein sufB [Enterococcus faecalis T11]
gi|257421964|ref|ZP_05598954.1| FeS assembly protein sufB [Enterococcus faecalis X98]
gi|294780905|ref|ZP_06746259.1| FeS assembly protein SufB [Enterococcus faecalis PC1.1]
gi|300860388|ref|ZP_07106475.1| FeS assembly protein SufB [Enterococcus faecalis TUSoD Ef11]
gi|307270852|ref|ZP_07552139.1| FeS assembly protein SufB [Enterococcus faecalis TX4248]
gi|307271498|ref|ZP_07552770.1| FeS assembly protein SufB [Enterococcus faecalis TX0855]
gi|307277174|ref|ZP_07558278.1| FeS assembly protein SufB [Enterococcus faecalis TX2134]
gi|307285825|ref|ZP_07565959.1| FeS assembly protein SufB [Enterococcus faecalis TX0860]
gi|307287728|ref|ZP_07567771.1| FeS assembly protein SufB [Enterococcus faecalis TX0109]
gi|307290556|ref|ZP_07570468.1| FeS assembly protein SufB [Enterococcus faecalis TX0411]
gi|312899822|ref|ZP_07759141.1| FeS assembly protein SufB [Enterococcus faecalis TX0470]
gi|312905114|ref|ZP_07764235.1| FeS assembly protein SufB [Enterococcus faecalis TX0635]
gi|312953472|ref|ZP_07772312.1| FeS assembly protein SufB [Enterococcus faecalis TX0102]
gi|29344352|gb|AAO82111.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227072683|gb|EEI10646.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX0104]
gi|227176910|gb|EEI57882.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis HH22]
gi|229305672|gb|EEN71668.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis ATCC 29200]
gi|229309732|gb|EEN75719.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX1322]
gi|255963157|gb|EET95633.1| FeS assembly protein SufB [Enterococcus faecalis T1]
gi|255968078|gb|EET98700.1| FeS assembly protein SufB [Enterococcus faecalis T2]
gi|256596579|gb|EEU15755.1| FeS assembly protein SufB [Enterococcus faecalis ATCC 4200]
gi|256684337|gb|EEU24032.1| FeS assembly protein SufB [Enterococcus faecalis T3]
gi|256710696|gb|EEU25739.1| FeS assembly protein SufB [Enterococcus faecalis T8]
gi|256947166|gb|EEU63798.1| FeS assembly protein SufB [Enterococcus faecalis DS5]
gi|256951809|gb|EEU68441.1| FeS assembly protein SufB [Enterococcus faecalis Merz96]
gi|256954055|gb|EEU70687.1| FeS assembly protein SufB [Enterococcus faecalis HIP11704]
gi|256987655|gb|EEU74957.1| FeS assembly protein SufB [Enterococcus faecalis JH1]
gi|256990059|gb|EEU77361.1| FeS assembly protein SufB [Enterococcus faecalis E1Sol]
gi|256992610|gb|EEU79912.1| FeS assembly protein SufB [Enterococcus faecalis Fly1]
gi|256995454|gb|EEU82756.1| FeS assembly protein SufB [Enterococcus faecalis D6]
gi|256999396|gb|EEU85916.1| FeS assembly protein sufB [Enterococcus faecalis CH188]
gi|257158459|gb|EEU88419.1| FeS assembly protein SufB [Enterococcus faecalis ARO1/DG]
gi|257161675|gb|EEU91635.1| FeS assembly protein sufB [Enterococcus faecalis T11]
gi|257163788|gb|EEU93748.1| FeS assembly protein sufB [Enterococcus faecalis X98]
gi|294452031|gb|EFG20479.1| FeS assembly protein SufB [Enterococcus faecalis PC1.1]
gi|300849427|gb|EFK77177.1| FeS assembly protein SufB [Enterococcus faecalis TUSoD Ef11]
gi|306498411|gb|EFM67916.1| FeS assembly protein SufB [Enterococcus faecalis TX0411]
gi|306501466|gb|EFM70769.1| FeS assembly protein SufB [Enterococcus faecalis TX0109]
gi|306502586|gb|EFM71853.1| FeS assembly protein SufB [Enterococcus faecalis TX0860]
gi|306506104|gb|EFM75270.1| FeS assembly protein SufB [Enterococcus faecalis TX2134]
gi|306511770|gb|EFM80768.1| FeS assembly protein SufB [Enterococcus faecalis TX0855]
gi|306512765|gb|EFM81410.1| FeS assembly protein SufB [Enterococcus faecalis TX4248]
gi|310628681|gb|EFQ11964.1| FeS assembly protein SufB [Enterococcus faecalis TX0102]
gi|310631504|gb|EFQ14787.1| FeS assembly protein SufB [Enterococcus faecalis TX0635]
gi|311293072|gb|EFQ71628.1| FeS assembly protein SufB [Enterococcus faecalis TX0470]
gi|315025421|gb|EFT37353.1| FeS assembly protein SufB [Enterococcus faecalis TX2137]
gi|315030230|gb|EFT42162.1| FeS assembly protein SufB [Enterococcus faecalis TX4000]
gi|315032884|gb|EFT44816.1| FeS assembly protein SufB [Enterococcus faecalis TX0017]
gi|315035631|gb|EFT47563.1| FeS assembly protein SufB [Enterococcus faecalis TX0027]
gi|315144767|gb|EFT88783.1| FeS assembly protein SufB [Enterococcus faecalis TX2141]
gi|315146668|gb|EFT90684.1| FeS assembly protein SufB [Enterococcus faecalis TX4244]
gi|315152139|gb|EFT96155.1| FeS assembly protein SufB [Enterococcus faecalis TX0031]
gi|315155326|gb|EFT99342.1| FeS assembly protein SufB [Enterococcus faecalis TX0043]
gi|315159098|gb|EFU03115.1| FeS assembly protein SufB [Enterococcus faecalis TX0312]
gi|315164827|gb|EFU08844.1| FeS assembly protein SufB [Enterococcus faecalis TX1302]
gi|315166414|gb|EFU10431.1| FeS assembly protein SufB [Enterococcus faecalis TX1341]
gi|315170311|gb|EFU14328.1| FeS assembly protein SufB [Enterococcus faecalis TX1342]
gi|315173655|gb|EFU17672.1| FeS assembly protein SufB [Enterococcus faecalis TX1346]
gi|315574375|gb|EFU86566.1| FeS assembly protein SufB [Enterococcus faecalis TX0309B]
gi|315579057|gb|EFU91248.1| FeS assembly protein SufB [Enterococcus faecalis TX0630]
gi|315580150|gb|EFU92341.1| FeS assembly protein SufB [Enterococcus faecalis TX0309A]
gi|323481382|gb|ADX80821.1| FeS assembly protein SufB [Enterococcus faecalis 62]
gi|327535678|gb|AEA94512.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis OG1RF]
Length = 464
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 282/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V GL ED++R IS K EP+WML++RL + ++ M W
Sbjct: 6 ELEEYKFGFHDDVEPVFSTGDGLTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPMQEW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDF + YY P + DDV ++ T+EK+GIP E+ LAG
Sbjct: 66 GP-DLSDIDFSKIKYYQKPSDKPA-RDWDDVPDKIKETFEKIGIPEAERAYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G+IF A+ E+PDL K+Y S +VP DN AALNS
Sbjct: 120 ---AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 237 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 349 DGGEVNYRGQVTFGKDSAGSISHIECDTIIMDEKSKSDTIPFNEIHNSQVSLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 464
>gi|320449481|ref|YP_004201577.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
gi|320149650|gb|ADW21028.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
Length = 468
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 199/474 (41%), Positives = 278/474 (58%), Gaps = 17/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
++YKY F ++ V A +GL +I IS K EP+WML++RL A + P+W
Sbjct: 11 EEYKYHFVDEVKPVFVAERGLTRRVIEAISYHKGEPEWMLKFRLRALEIFQKKPMPTWGP 70
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+D D+L YY P + +S + + E+ RTYE+LGIP E+++LAG V
Sbjct: 71 -DLSGLDLDNLVYYVKPAEVRDAKSWEQIPEEIRRTYERLGIPEAERKVLAG-------V 122
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A +DS V +EEL++ GVIF+ I E + ++ DL K+Y + VVP DN +AALNSA
Sbjct: 123 GAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNSAA 182
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSFVYIP GV+ + L YFR+N GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 183 WSGGSFVYIPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTE 242
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LH V+E+V A +Y+T+QNW +YN VT+R G + W
Sbjct: 243 SLHTGVIEIVVKRGARSRYTTIQNW-------STNMYNLVTQRALVYGD-AFHEWLDGNL 294
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L + E SIA + Q D+G K++ A +T+ IVSK IS G
Sbjct: 295 GSKVTMKYPSSYLLEPGARTEILSIAFAKTGQHQDTGAKIILGAPHTSGTIVSKSISKGE 354
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+YRG V V GA ++ +CD+LLI T PYIE + + ++ HEAT SKI+
Sbjct: 355 GRASYRGLVKVLEGARGAKANVECDALLIDPESRTDTYPYIEIEEDTAHVGHEATVSKIN 414
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+ E+ A ALIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 415 DEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 468
>gi|298253482|ref|ZP_06977274.1| cysteine desulfurase activator SufB [Gardnerella vaginalis 5-1]
gi|297532877|gb|EFH71763.1| cysteine desulfurase activator SufB [Gardnerella vaginalis 5-1]
Length = 529
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 296/488 (60%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKI--DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + +I + Y YG+ + + A KG++E ++R ISA KNEP+WML+ RL
Sbjct: 58 EEKIRQDEQIVAEFGDYNYGWHDSDAAGEAAKKGIDESVVRAISADKNEPEWMLDLRLQG 117
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR +L P W + D DD YY P ++ DD+ ++ +TY++LGIP E
Sbjct: 118 YRAFLQKPMPDWG-VDLSGFDADDFKYYVRPVHDQA-KTWDDLPEDIRKTYDRLGIPEAE 175
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+L GVIF+ A+ ++P+LVKKY +TV+
Sbjct: 176 KKRLV------SGVAAQYESEVIYNSIREDLAAQGVIFVDTDTAVQKYPELVKKYFATVI 229
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PV DN +AALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 230 PVDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 289
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LHAA VE+V +A ++Y+TVQNW +YN VT+R
Sbjct: 290 HYVEGCTAPIYSTDSLHAANVEIVVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 342
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S++ + Q D+G KM+HLA +
Sbjct: 343 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLSFAGRGQYQDTGAKMIHLAPH 401
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S + CD+LL+ + + T P+++ +
Sbjct: 402 TSSTIVAKSISRGGGRSAYRGLVKIIKGAKGSSSSVVCDALLVDDFSRSDTYPHVDVRED 461
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 462 DVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 521
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 522 LQMEGSVG 529
>gi|297565449|ref|YP_003684421.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
gi|296849898|gb|ADH62913.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
Length = 468
Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats.
Identities = 201/474 (42%), Positives = 289/474 (60%), Gaps = 17/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+YKYGF ++ V K+ KGL+ ++ IS K EP WML++RL A + + P+W
Sbjct: 11 SEYKYGFVDEVRPVFKSEKGLSRRVVEAISYHKGEPQWMLDFRLKALEIFNSKPMPTWGG 70
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
++FD++Y+YA P + +S D+V E+ RTYE+LGIP E+++LAG V
Sbjct: 71 -DLSGLNFDEIYFYAKPTEVRDAKSWDEVPEEIRRTYERLGIPEAERKVLAG-------V 122
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A +DS V KEEL + GVIF+ I E + + DL ++Y +TV+P DN +AALNSAV
Sbjct: 123 GAQYDSEMVYHQVKEELARLGVIFVSIEEGLKHYEDLFREYFATVIPPEDNKFAALNSAV 182
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSFVY+PKGV+ + L YFR+N GQFERT+II DEG+ + Y+EGCTAP +
Sbjct: 183 WSGGSFVYVPKGVKVELPLQAYFRVNTAELGQFERTIIIVDEGAEMHYIEGCTAPTYSTD 242
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
H+ V+E+V A +Y+T+QNW +YN VT+R G + W
Sbjct: 243 SFHSGVIEIVVKKGARSRYTTIQNW-------SHNMYNLVTQRAVVHGD-AYHEWLDGNL 294
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L + E SIA ++ Q D+G K++ A +T+ IVSK IS G
Sbjct: 295 GSKLTMKYPSSYLIEPGARSEIMSIAFASTGQHQDTGGKLILAAPHTSGTIVSKSISKGQ 354
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+YRG V V+ GA H+R +CD+LLI T PYIE + + ++ HEAT SK++
Sbjct: 355 GRASYRGLVKVYEGAKHARVNVECDALLINPESRTDTYPYIEIEEDTAHVGHEATVSKLN 414
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+ E+ A ALIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 415 DEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 468
>gi|229916530|ref|YP_002885176.1| FeS assembly protein SufB [Exiguobacterium sp. AT1b]
gi|229467959|gb|ACQ69731.1| FeS assembly protein SufB [Exiguobacterium sp. AT1b]
Length = 465
Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 289/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ + ++ +GL +I+ IS K EP WML++RL + + M P+W
Sbjct: 7 EIGDYKYGFHDRDVSIFRSGRGLTTEIVETISRMKEEPQWMLDFRLKSLDHFNKMAMPTW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
A+DFD++ YY P +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLSALDFDEITYYVKPSEKTE-RSWDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V + +E+ ++ GVIF A+ E ++ K+Y ++P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHSMQEDFEEKGVIFKDTDTALKEDEEIFKEYFGKLIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKLEQPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE+ +A +Y+T+QNW +YN VTKR C S + W
Sbjct: 238 TNSLHSAVVEIFVNKDAYCRYTTIQNWA-------NNVYNLVTKRAVCEAGGS-MEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +L+GE + G SIA++ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSSIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+YRG V R A +R+ +CD+L++ N + TIPY E N +LEHEA SK
Sbjct: 350 QGGKVSYRGIVHFGRKAKGARSNIECDTLIMDNESTSDTIPYNEILNDQVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|315150168|gb|EFT94184.1| FeS assembly protein SufB [Enterococcus faecalis TX0012]
Length = 464
Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats.
Identities = 201/476 (42%), Positives = 281/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V GL ED++R IS K EP+WML++RL + ++ M W
Sbjct: 6 ELEEYKFGFHDDVEPVFSTGDGLTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPMQEW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDF + YY P + DDV ++ T+EK+GIP E+ LAG
Sbjct: 66 GP-DLSDIDFSKIKYYQKPSDKPA-RDWDDVPDKIKETFEKIGIPEAERAYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G+IF A+ E+PDL K+Y S +VP DN AALNS
Sbjct: 120 ---AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PK VR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKDVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 237 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 349 DGGEVNYRGQVTFGKDSAGSISHIECDTIIMDEKSKSDTIPFNEIHNSQVSLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 464
>gi|325109894|ref|YP_004270962.1| Iron-regulated ABC transporter membrane component SufB
[Planctomyces brasiliensis DSM 5305]
gi|324970162|gb|ADY60940.1| Iron-regulated ABC transporter membrane component SufB
[Planctomyces brasiliensis DSM 5305]
Length = 471
Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats.
Identities = 197/479 (41%), Positives = 285/479 (59%), Gaps = 19/479 (3%)
Query: 13 KIDVDQYKYGFE--TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
++D+ Y+YGF T+ + KGL+ I+ IS K EP WM ++RL + +
Sbjct: 10 QVDIGSYQYGFHDPTDKYSFTSRKGLDAQIVGQISEMKGEPGWMRDFRLKSLEIFEQKPM 69
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P W ++F D+YYY G +S DDV ++ +TY++LGIP E++ LAG
Sbjct: 70 PYWGG-DMSDLNFQDIYYYVKAAEEQG-KSWDDVPEDIRKTYDRLGIPEAEKKYLAG--- 124
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
V A ++S V + +E+L K GV+F A+ E+P+L +++ TV+P DN +AA
Sbjct: 125 ----VKAQYESEVVYGSLQEDLAKQGVLFTDTDTALKEYPELFREHFGTVIPPADNKFAA 180
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAV++ GSF+Y+P GV L YFRIN GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 181 LNSAVWSGGSFIYVPPGVEIEFPLQAYFRINTMNMGQFERTLIIVDEGAAVHYVEGCTAP 240
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ LH+AVVE++ +Y+T+QNW +YN VTKR G S + W
Sbjct: 241 TYSSDSLHSAVVEIIVKRGGRCRYTTIQNW-------SNNVYNLVTKRAMAYGD-SLMEW 292
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS +T KYP+ L + GE SIA + Q D+G KM+H A NT+SRI+SK
Sbjct: 293 VDGNLGSKLTMKYPAIYLMEPGARGETLSIAFAGDGQHQDAGAKMVHCAPNTSSRIISKS 352
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS ++YRG V V+ GA + R+ CD+L++ + + T PYIE + +EHEA+
Sbjct: 353 ISKNGGRSSYRGLVKVNNGAENCRSNVVCDALILDPDSQSDTYPYIEIDENDVAIEHEAS 412
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SKI++E L Y + RG+ E A A+IV GF+ ++++LPME+AVE +LI++ +EGSVG
Sbjct: 413 VSKIAEEQLLYLMSRGLTEAEASAMIVTGFIEPLVKELPMEYAVEMNRLIELQMEGSVG 471
>gi|239622030|ref|ZP_04665061.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|239515221|gb|EEQ55088.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
CCUG 52486]
Length = 499
Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 291/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + K +I Y YG+ + + A +G++E+++R ISA K EP WML+ RL
Sbjct: 28 EDKIKKDDEIISQFGDYNYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P +S D++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIDKQA-KSWDELPDDIRNTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+LKK GVIF+ A+ E+P+LVKKY TVV
Sbjct: 146 KNRLV------SGVAAQYESEVIYNSIQEDLKKQGVIFVDTDTAVREYPELVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SKIS++ LFY + RG+ EE A +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|312198653|ref|YP_004018714.1| FeS assembly protein SufB [Frankia sp. EuI1c]
gi|311229989|gb|ADP82844.1| FeS assembly protein SufB [Frankia sp. EuI1c]
Length = 470
Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats.
Identities = 195/490 (39%), Positives = 294/490 (60%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDK-APKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + + YK+G+ +GL+E ++R ISAKK+EP WM + R+
Sbjct: 1 MTTSAET--ALEGL--GSYKFGWADADAYADDVERGLSEAVVRGISAKKSEPSWMTDLRM 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W I FD++ Y+ +S DD+ ++ TY+KLGIP
Sbjct: 57 KGLKLFERKPMPTWG-ADLSGIHFDNIKYFVRSTEKQA-ESWDDLPADIKDTYDKLGIPE 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ + EHP++ K+Y +
Sbjct: 115 AEKQRLI------SGVAAQYESEVVYHKIREDLEEQGVIFLDTDSGLREHPEIFKEYFGS 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +AALN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+
Sbjct: 169 VIPVGDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE+V NA +Y+T+QNW +YN VTKR
Sbjct: 229 YVHYVEGCTAPVYSSDSLHSAVVEIVVKKNARCRYTTIQNW-------SNNVYNLVTKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
C+ + W GS +T KYP+ L GE++ GE SIA + Q D+G KM+H A
Sbjct: 282 ACQ-EGGTMEWIDGNIGSKVTMKYPAVWLLGERARGEVLSIAFAGPGQHQDAGAKMVHAA 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S+I+SK ++ G +YRG V +H GA S++ +CD+LL+ + T PY++ +
Sbjct: 341 PRTSSQIISKSVARGGGRTSYRGLVQIHEGANQSKSTVKCDALLVDTVSRSDTYPYVDVR 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA+ SK+ ++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 401 EDDASIGHEASVSKVGEDQLFYLMSRGMAEDEAMAMIVRGFVEPIARELPMEYALELNRL 460
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 461 IELQMEGSVG 470
>gi|322688970|ref|YP_004208704.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
157F]
gi|320460306|dbj|BAJ70926.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis 157F]
Length = 499
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 198/488 (40%), Positives = 293/488 (60%), Gaps = 19/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+R+ + +++ Y YG+ + + A +G++E+++R ISA K EP WML+ RL
Sbjct: 30 KIRQDDEIIQQF--GDYNYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P +S D++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIDKQA-KSWDELPDDIRNTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+LKK GVIF+ A+ E+P+LVKKY TVV
Sbjct: 146 KNRLV------SGVAAQYESEVIYNSIQEDLKKQGVIFVDTDTAVREYPELVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SKIS++ LFY + RG+ EE A +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|23335002|ref|ZP_00120240.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bifidobacterium longum
DJO10A]
gi|23465446|ref|NP_696049.1| ABC transporter [Bifidobacterium longum NCC2705]
gi|189439469|ref|YP_001954550.1| Fe-S cluster assembly ABC transporter permease [Bifidobacterium
longum DJO10A]
gi|312132877|ref|YP_004000216.1| sufb2 [Bifidobacterium longum subsp. longum BBMN68]
gi|317482205|ref|ZP_07941227.1| FeS assembly protein SufB [Bifidobacterium sp. 12_1_47BFAA]
gi|322690939|ref|YP_004220509.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
1217]
gi|23326097|gb|AAN24685.1| possible ABC transporter component [Bifidobacterium longum NCC2705]
gi|189427904|gb|ACD98052.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium longum DJO10A]
gi|311773847|gb|ADQ03335.1| SufB2 [Bifidobacterium longum subsp. longum BBMN68]
gi|316916343|gb|EFV37743.1| FeS assembly protein SufB [Bifidobacterium sp. 12_1_47BFAA]
gi|320455795|dbj|BAJ66417.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. longum JCM 1217]
Length = 499
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 291/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + K +I Y YG+ + + A +G++E+++R ISA K EP WML+ RL
Sbjct: 28 EDKIKKDDEIISQFGDYNYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P +S D++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIDKQA-KSWDELPDDIRNTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+LKK GVIF+ A+ E+P+LVKKY TVV
Sbjct: 146 KNRLV------SGVAAQYESEVIYNSIQEDLKKQGVIFVDTDTAVREYPELVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SKIS++ LFY + RG+ EE A +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|325842531|ref|ZP_08167702.1| FeS assembly protein SufB [Turicibacter sp. HGF1]
gi|325489575|gb|EGC91939.1| FeS assembly protein SufB [Turicibacter sp. HGF1]
Length = 473
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 209/491 (42%), Positives = 295/491 (60%), Gaps = 20/491 (4%)
Query: 1 MVA-VRETVDKVRKIDVDQYKYGFETNIQVDK-APKGLNEDIIRFISAKKNEPDWMLEWR 58
M A V+E ++ I D YKYGF+T+ + K KG++E ++R IS K EP+WMLE+R
Sbjct: 1 MSAEVQEKKHEIEGIVTD-YKYGFKTDYKNIKDTGKGISEAVVREISEIKGEPEWMLEYR 59
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L AY + P W I+FDD YY P S D+V E+ T++KLGIP
Sbjct: 60 LKAYNHFAKTPMPEWGP-DLSEINFDDYTYYIKPSEKTE-NSWDEVPDEIKDTFDKLGIP 117
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E + L+GV T ++S V ++EL+++GVIFM A+ ++PDL K+Y
Sbjct: 118 EAEAKFLSGVST-------QYESEVVYHNNQKELEEAGVIFMDTDSALKQYPDLFKEYFG 170
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
V+ DN ++ALNSAV++ GSF+Y+PKGV+ L +YFRIN + GQFERTLII DEG
Sbjct: 171 KVISYADNKFSALNSAVWSGGSFIYVPKGVKIEKPLQSYFRINTESMGQFERTLIIVDEG 230
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + Y+EGCTAP + LH+AVVE+ +YST+QNW I N VTKR
Sbjct: 231 ADIHYVEGCTAPTYSADSLHSAVVEIYIRKGGRCRYSTIQNW-------SNNILNLVTKR 283
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C + + W GS IT KYP+C+L+GE + G SIA + Q D+G KM+HL
Sbjct: 284 AVC-EDYAHMEWIDGNIGSKITMKYPACVLKGEGAKGTTISIAFAGEGQIQDAGAKMIHL 342
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A NT+S I+SK +S N TYRG V + A +++ +CD+L++ N + TIPY
Sbjct: 343 APNTSSTIISKSLSRNGGNVTYRGIVEHGKNAKGAKSHVECDTLILDNVSKSDTIPYNIV 402
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
KN ++HEAT SK+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +
Sbjct: 403 KNDDVTIQHEATVSKVSEEQLFYLMSRGLTEEQATEMIVMGFIEPFAKELPMEYAVELNQ 462
Query: 479 LIDISLEGSVG 489
L+ + + GS+G
Sbjct: 463 LLKLEMNGSIG 473
>gi|293383598|ref|ZP_06629508.1| FeS assembly protein SufB [Enterococcus faecalis R712]
gi|293387289|ref|ZP_06631846.1| FeS assembly protein SufB [Enterococcus faecalis S613]
gi|312906148|ref|ZP_07765160.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 512]
gi|312909493|ref|ZP_07768348.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 516]
gi|291079110|gb|EFE16474.1| FeS assembly protein SufB [Enterococcus faecalis R712]
gi|291083326|gb|EFE20289.1| FeS assembly protein SufB [Enterococcus faecalis S613]
gi|310627794|gb|EFQ11077.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 512]
gi|311290166|gb|EFQ68722.1| FeS assembly protein SufB [Enterococcus faecalis DAPTO 516]
Length = 464
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 202/476 (42%), Positives = 282/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V GL ED++R IS K EP+WML++RL + ++ M W
Sbjct: 6 ELEEYKFGFHDDVEPVFSTGDGLTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPMQEW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDF + YY P + DDV ++ T+EK+GIP E+ LAG
Sbjct: 66 GP-DLSDIDFSKIKYYQKPSDKPA-RDWDDVPDKIKETFEKIGIPEAERAYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G+IF A+ E+PDL K+Y S +VP DN AALNS
Sbjct: 120 ---AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 237 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGAIVEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 349 DGGEVNYRGQVTFGKDSAGSISHIECDTIIMDEKSKSDTIPFNEIHNSQVSLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 464
>gi|163849014|ref|YP_001637058.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222526976|ref|YP_002571447.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
gi|163670303|gb|ABY36669.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222450855|gb|ACM55121.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
Length = 471
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 204/481 (42%), Positives = 281/481 (58%), Gaps = 20/481 (4%)
Query: 13 KIDVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+ D +YGF V KAPKGLNE I+R +S K EP+WML+ RL A + P
Sbjct: 7 NLQFDYSRYGFRQEERYVYKAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIFNKKPTP 66
Query: 72 ---SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+WA +++DD++Y+ D V PE+ T+E+LGIP E++ LAG
Sbjct: 67 LVGTWANPELAELNYDDIHYFVRANERPQTD-WDAVPPEIKNTFERLGIPEAERKFLAG- 124
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A ++S V + +EE K GVIF+ A+ E+P+ K+Y T+VP DN Y
Sbjct: 125 ------VGAQYESEVVYHSLREEWAKQGVIFLDTDTALKEYPEFFKEYFGTIVPAADNKY 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALN+AV++ GSFVY+PKGV+ + L YFRIN + GQFERTLII DEG+ Y+EGCT
Sbjct: 179 AALNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP N LH+AVVE++ + +Y+T+QNW I+N VTKR + +
Sbjct: 239 APIYSTNSLHSAVVEVIVKKGGKFRYTTIQNWA-------NNIFNLVTKRAVAYEE-ASM 290
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS +T KYPS L G ++ GE S+A + Q D+G KM+HLA TTSRI +
Sbjct: 291 EWVDGNIGSKLTMKYPSVYLMGRKARGEVLSVAYAGRGQHQDAGAKMIHLAPETTSRITN 350
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K +S TYRG V GA ++ CD+L++ + + TIPYIE + C L HE
Sbjct: 351 KSVSKDGGKTTYRGLAKVAPGAYGAKINVNCDALILDEHSASDTIPYIEIEEDRCTLAHE 410
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AT +I E LFY + RGI E A+++IV GF+ ++LPME+AVE +LI + +EGSV
Sbjct: 411 ATVGRIGAEQLFYLMSRGISESDALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSV 470
Query: 489 G 489
G
Sbjct: 471 G 471
>gi|218294673|ref|ZP_03495527.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
gi|218244581|gb|EED11105.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
Length = 468
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 199/474 (41%), Positives = 283/474 (59%), Gaps = 17/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
++YKYGF ++ V A +GL+ +I IS K EP+WML++RL A + P+W
Sbjct: 11 EEYKYGFVDEVKPVFVAERGLSRRVIEAISYHKGEPEWMLKFRLRALEIFQKKPMPTWGP 70
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+D D+L YY P + +S ++V E+ +TYE+LGIP E+++LAG V
Sbjct: 71 -DLSGLDLDNLVYYVKPAEVRDARSWEEVPEEIRKTYERLGIPEAERKVLAG-------V 122
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A +DS V +EEL++ GVIF+ I E + ++ DL ++Y + VVP DN +AALNSA
Sbjct: 123 GAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLFREYFAKVVPPEDNKFAALNSAA 182
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSFVY+P GV+ + L YFR+N GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 183 WSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTE 242
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LH V+E+V A+ +Y+T+QNW +YN VT+R G + W
Sbjct: 243 SLHTGVIEIVVKRGAKSRYTTIQNW-------STNMYNLVTQRALVYGD-AYHEWLDGNL 294
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L + E SIA + Q D+G K++ A +T+ IVSK IS G
Sbjct: 295 GSKVTMKYPSSYLLEPGARTEILSIAFAKTGQHQDTGAKIVMAAPHTSGTIVSKSISKGE 354
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+YRG V V GA H++ +CD+LLI T PYIE + + ++ HEAT SKI+
Sbjct: 355 GRASYRGLVKVMEGARHAKANVECDALLIDPESRTDTYPYIEIEEETAHVGHEATVSKIN 414
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+ E+ A ALIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 415 DEQIFYLQTRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 468
>gi|227545922|ref|ZP_03975971.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bifidobacterium longum subsp. infantis ATCC 55813]
gi|227213556|gb|EEI81405.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bifidobacterium longum subsp. infantis ATCC 55813]
Length = 499
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 291/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + K +I Y YG+ + + A +G++E+++R ISA K EP WML+ RL
Sbjct: 28 EDKIKKDDEIISQFGDYNYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P +S D++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIDKQA-KSWDELPDDIRNTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+LKK GVIF+ A+ E+P+LVKKY TVV
Sbjct: 146 KNRLV------SGVAAQYESEVIYNSIQEDLKKQGVIFVDTDTAVREYPELVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SKIS++ LFY + RG+ EE A +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|315161691|gb|EFU05708.1| FeS assembly protein SufB [Enterococcus faecalis TX0645]
Length = 464
Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 201/476 (42%), Positives = 281/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V GL ED++R IS K EP+WML++RL + ++ M W
Sbjct: 6 ELEEYKFGFHDDVEPVFSTGDGLTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPMQEW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDF + YY P + DDV ++ T+EK+GIP E+ LAG
Sbjct: 66 GP-DLSDIDFSKIKYYQKPSDKPA-RDWDDVPDKIKETFEKIGIPEAERAYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G+IF A+ E+PDL K+Y S +VP DN AALNS
Sbjct: 120 ---AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLI DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIFVDEGASVHYVEGCTAPTYS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 237 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 349 DGGEVNYRGQVTFGKDSAGSISHIECDTIIMDEKSKSDTIPFNEIHNSQVSLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 464
>gi|297518166|ref|ZP_06936552.1| cysteine desulfurase activator complex subunit SufB [Escherichia
coli OP50]
Length = 484
Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 283/493 (57%), Positives = 362/493 (73%), Gaps = 24/493 (4%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V
Sbjct: 412 ANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVF 471
Query: 466 QKLPMEFAVEAQK 478
+LP+EFAVEAQK
Sbjct: 472 SELPLEFAVEAQK 484
>gi|291516996|emb|CBK70612.1| Iron-regulated ABC transporter membrane component SufB
[Bifidobacterium longum subsp. longum F8]
Length = 499
Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 198/488 (40%), Positives = 290/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + K +I Y YG+ + + A +G++E+++R ISA K EP WML+ RL
Sbjct: 28 EDKIKKDDEIISQFGDYNYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P +S D++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIDKQA-KSWDELPDDIRNTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+LKK GVIF+ A+ E+P+LVKKY TVV
Sbjct: 146 KNRLV------SGVAAQYESEVIYNSIQEDLKKQGVIFVDTDTAVREYPELVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PK V + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPEDNKFGALNTAAWSGGSFVYVPKDVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SKIS++ LFY + RG+ EE A +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|291456679|ref|ZP_06596069.1| FeS assembly protein SufB [Bifidobacterium breve DSM 20213]
gi|291381956|gb|EFE89474.1| FeS assembly protein SufB [Bifidobacterium breve DSM 20213]
Length = 499
Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 199/488 (40%), Positives = 291/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + +I Y YG+ + + A +G++E+++R ISA K EP WML+ RL
Sbjct: 28 EDKIKQDDEIISQFGDYSYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P +S DD+ ++ TY++LGIP E
Sbjct: 88 FKAFLDKPMPDWG-VDLSGFNADDFKYYVKPIEKQA-KSWDDLPDDIRSTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+LKK GVIF+ A+ E+P+LVKKY TVV
Sbjct: 146 KNRLV------SGVAAQYESEVIYNSIREDLKKQGVIFVDTDTAVREYPELVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SKIS++ LFY + RG+ EE A +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|116627120|ref|YP_819739.1| hypothetical protein STER_0222 [Streptococcus thermophilus LMD-9]
gi|116100397|gb|ABJ65543.1| Iron-regulated ABC transporter membrane component SufB
[Streptococcus thermophilus LMD-9]
Length = 472
Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 209/490 (42%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ +YKYGF ++ V KG++ED++R +SA+K EP+WMLE+RL
Sbjct: 1 MTETNEKVE-PKPIDLGEYKYGFRDDVTPVFSTGKGISEDVVRAMSAEKEEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W I+FDDL Y+ + +DV ++ T+E++GIP
Sbjct: 60 KSLETFNKMPMQEWGP-DLSGINFDDLTYFQKASDKPA-RDWEDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G+IF A+ EHP+L KKY S
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPELFKKYFSK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN +AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + T QFERTLII DEG+
Sbjct: 171 LVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ ALD A ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ +T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|322373793|ref|ZP_08048328.1| FeS assembly protein SufB [Streptococcus sp. C150]
gi|321277165|gb|EFX54235.1| FeS assembly protein SufB [Streptococcus sp. C150]
Length = 472
Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats.
Identities = 208/490 (42%), Positives = 293/490 (59%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ +YKYGF ++ V KG++ED++R +SA+K EP+WMLE+RL
Sbjct: 1 MTETNEKVE-PKPIDLGEYKYGFHDDVTPVFSTGKGISEDVVRAMSAEKGEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W IDFDDL Y+ + +DV ++ T+E++GIP
Sbjct: 60 KSLETFNKMPMQEWGP-DLSEIDFDDLTYFQKASDRPA-RDWEDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G+IF A+ E+P+L KKY S
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIIFTDTDSALKEYPELFKKYFSK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN +AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + T QFERTLII DEG+
Sbjct: 171 LVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ AL+ A ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYTSASLHAAIVEIFALEGAYMRYSTIQNW-------SDSVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAKKTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSGSHIECDTILMDDLSKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|325283588|ref|YP_004256129.1| FeS assembly protein SufB [Deinococcus proteolyticus MRP]
gi|324315397|gb|ADY26512.1| FeS assembly protein SufB [Deinococcus proteolyticus MRP]
Length = 468
Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats.
Identities = 197/473 (41%), Positives = 292/473 (61%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+Y+YG+ + KAPKGL+ +++ IS K+EP WML++RL A +L+ P W
Sbjct: 13 EYEYGWSNPERYAIKAPKGLSREVVEMISKAKDEPQWMLDFRLKALDIFLSKPMPEWG-A 71
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
++ D++YYY P+ +S DDV ++ T+E+LGIP E+ LAG V
Sbjct: 72 DLSGLNLDEIYYYIKPEGFNA-RSWDDVPEDVKNTFERLGIPEAERAALAG-------VG 123
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE +K GV+F+ I + + E+P+L ++Y +TVVP DN +AA+NSAV+
Sbjct: 124 AQYESEMVYHNLKEEWEKLGVVFLSIEDGMREYPELFREYFATVVPPEDNKFAAVNSAVW 183
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSFVY+PKGV+ + L TYFRIN + +GQFERTLII +EG+ Y+EGCTAP +
Sbjct: 184 SGGSFVYVPKGVKVDIPLQTYFRINAENSGQFERTLIIIEEGAQAHYIEGCTAPAYSSDS 243
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
H+ V+E+V + A +YST+QNW +YN VT+R G + W G
Sbjct: 244 FHSGVIEIVVKEGARFRYSTIQNW-------SHNVYNLVTQRAAVYG-NGVMEWVDGNLG 295
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C L E + GE SIA+++ Q D+G K++H A +T+ IVSK IS
Sbjct: 296 SKVTMKYPACYLLEEGARGEVLSIAMASRGQHQDAGAKIVHFAPHTSGSIVSKSISKDSG 355
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
++YRG V ++ GA S+ +CD+LL+ T PYIE + + ++ HEAT SKI+D
Sbjct: 356 RSSYRGLVKIYEGARGSKTNVECDALLLDEEARTDTYPYIEIEEKNASVGHEATVSKIND 415
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E + Y RG+ E+ A LIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 416 EQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 468
>gi|226355170|ref|YP_002784910.1| hypothetical protein Deide_03340 [Deinococcus deserti VCD115]
gi|226317160|gb|ACO45156.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 468
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 196/473 (41%), Positives = 289/473 (61%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+Y+YG+ + KAPKGL+ D++ IS K EP WML++RL A + + P W
Sbjct: 13 EYEYGWSNPERYAIKAPKGLSRDVVEMISKAKEEPQWMLDFRLKALDIFNSKPMPEWG-A 71
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
++ D++YYY P+ +S DDV ++ RT+E+LGIP E+ LAG V
Sbjct: 72 DLSGLNLDEIYYYIKPEGFNA-RSWDDVPEDVKRTFERLGIPEAERAALAG-------VG 123
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE +K GV+F+ I + + ++P++ ++Y +TVVP DN +AA+NSAV+
Sbjct: 124 AQYESEMVYHNLKEEWEKLGVVFLSIEDGMRQYPEMFREYFATVVPPEDNKFAAINSAVW 183
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSFVY+PKGV+ + L TYFRIN + +GQFERTLII DEG+ Y+EGCTAP + +
Sbjct: 184 SGGSFVYVPKGVKVDIPLQTYFRINAESSGQFERTLIIIDEGAQAHYIEGCTAPAYNADS 243
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
H+ V+E++ + A +YST+QNW +YN VT+R G + W G
Sbjct: 244 FHSGVIEIIVKEGARFRYSTIQNW-------SHNVYNLVTQRAAVYG-NGVMEWVDGNLG 295
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C L E + GE SIA++ Q D+G K++H A +T+ IVSK IS
Sbjct: 296 SKVTMKYPACYLLEEGARGEVLSIAMAGRGQHQDAGAKIVHFAPHTSGTIVSKSISKDSG 355
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
++YRG V ++ GA S+ +CD+LL+ T PYIE + + HEAT SKI+D
Sbjct: 356 RSSYRGLVKIYEGAKGSKTNVECDALLLDEEARTDTYPYIEIEEKDARVGHEATVSKIND 415
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E + Y RG+ E+ A LIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 416 EQILYLQSRGLSEDQAAGLIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 468
>gi|288904539|ref|YP_003429760.1| FeS cluster formation protein SufB [Streptococcus gallolyticus
UCN34]
gi|306830533|ref|ZP_07463701.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325977510|ref|YP_004287226.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731264|emb|CBI12814.1| putative FeS cluster formation protein SufB [Streptococcus
gallolyticus UCN34]
gi|304427327|gb|EFM30431.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325177438|emb|CBZ47482.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 472
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 203/490 (41%), Positives = 292/490 (59%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V + ID+ Y++GF ++ + KG++E ++R +SA+K EP+WMLE+RL
Sbjct: 1 MPEKNEKV-TPKPIDIGDYQFGFHDDVTPIFSTGKGISEAVVREMSAEKGEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W I+FD++ YY +S DDV ++ T+E++GIP
Sbjct: 60 KSLEIFNKMPMQDWGP-DLSDINFDEINYYQKASDRPA-RSWDDVPDKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K+E K G+IF A+ E+PDL KKY +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKDEYDKLGIIFTDTDSALKEYPDLFKKYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ AL+ + ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPNYSSASLHAAIVEIFALEGSYMRYSTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKESKKSVSHIECDTIIMDDISRSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|306832770|ref|ZP_07465906.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
gi|304425119|gb|EFM28249.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
Length = 472
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 202/490 (41%), Positives = 292/490 (59%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E + + ID+ Y++GF ++ + KG++E ++R +SA+K EP+WMLE+RL
Sbjct: 1 MPEKNEKI-TPKPIDIGDYQFGFHDDVTPIFSTGKGISEAVVREMSAEKGEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W I+FD++ YY +S DDV ++ T+E++GIP
Sbjct: 60 KSLEIFNKMPMQDWGP-DLSDINFDEINYYQKASDRPA-RSWDDVPDKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V K+E K G+IF A+ E+PDL KKY +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKDEYDKLGIIFTDTDSALKEYPDLFKKYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ AL+ + ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPNYSSASLHAAIVEIFALEGSYMRYSTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++++ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKESKKSVSHIECDTIIMDDISRSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|319442082|ref|ZP_07991238.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium variabile DSM
44702]
Length = 492
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 285/475 (60%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ ++ + A +GL+ED++R ISAKKNEP+WMLE RL A + P+W
Sbjct: 34 IGAYEYGWHDSDLAGETAERGLSEDVVRMISAKKNEPEWMLERRLKALDTFERKPMPTWG 93
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
DFDD Y+ +++ ++ TY+KLGIP E++ L
Sbjct: 94 ADLDDI-DFDDFKYFVRSTEKQATS-WEELPEDIKNTYDKLGIPEAEKQRLV------AG 145
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ A+ EHPDL K+Y TVVP GDN +AALN+A
Sbjct: 146 VAAQYESEVVYHQIREDLEAQGVIFLDTDTALREHPDLFKEYFGTVVPAGDNKFAALNTA 205
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+PKGV + L YFRIN + GQFERTLII DEG++V Y+EGCTAP
Sbjct: 206 VWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAFVHYVEGCTAPIYQS 265
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+A+VE++ +Y+T+QNW +YN VT+R + + W
Sbjct: 266 DSLHSAIVEIIVKKGGRCRYTTIQNW-------STNVYNLVTQRCRA-EEGATMEWVDGN 317
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS IT KYP+ + G + G SI + Q D+G KM+H+A T+S IVSK ++
Sbjct: 318 IGSKITMKYPAVWMTGPHAKGTVLSIGFAGEGQTQDTGGKMVHMAPYTSSTIVSKSVARN 377
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V V++ A HS + +CD+LL+ + + T PY + +N L HEAT S++
Sbjct: 378 GGRAAYRGLVQVNKDAHHSTSSVECDALLVDSISRSDTYPYNDIRNDHVTLGHEATVSQV 437
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ E+ A+A+IV GFV V ++LPME+A+E +LI++ +EGSVG
Sbjct: 438 SEDQLFYLMSRGLEEDEAMAMIVRGFVEPVAKELPMEYALELNRLIELQMEGSVG 492
>gi|302546306|ref|ZP_07298648.1| FeS assembly protein SufB [Streptomyces hygroscopicus ATCC 53653]
gi|302463924|gb|EFL27017.1| FeS assembly protein SufB [Streptomyces himastatinicus ATCC 53653]
Length = 473
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 194/490 (39%), Positives = 294/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y+YG+ ++++ A +GL+E+++R ISAKK+EP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGNYEYGWADSDVAGASAKRGLSEEVVRDISAKKSEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 60 KGLKLFGKKPMPTWGS-DLSGIDFDNIKYFVRSTEQQAAS-WEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GV+F+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVLFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPAGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNLGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S IVSK ++ G +YRG + + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PRTSSNIVSKSVARGGGRTSYRGLIEIGEGAEGSKSNVLCDALLVDTVSRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSDDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|293375292|ref|ZP_06621574.1| FeS assembly protein SufB [Turicibacter sanguinis PC909]
gi|292646048|gb|EFF64076.1| FeS assembly protein SufB [Turicibacter sanguinis PC909]
Length = 473
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 208/491 (42%), Positives = 295/491 (60%), Gaps = 20/491 (4%)
Query: 1 MVA-VRETVDKVRKIDVDQYKYGFETNIQVDK-APKGLNEDIIRFISAKKNEPDWMLEWR 58
M A V+E ++ I D YKYGF+T+ + K KG++E ++R IS K EP+WMLE+R
Sbjct: 1 MSAEVQEKKHEIEGIVTD-YKYGFKTDYKNIKDTGKGISEAVVREISEIKGEPEWMLEYR 59
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L AY + P W I+FDD YY P S D+V E+ T++KLGIP
Sbjct: 60 LKAYNHFAKTPMPEWGP-DLSEINFDDYTYYIKPSEKTE-NSWDEVPDEIKDTFDKLGIP 117
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E + L+GV T ++S V ++EL+++GVIFM A+ ++PDL K+Y
Sbjct: 118 EAEAKFLSGVST-------QYESEVVYHNNQKELEEAGVIFMDTDSALKQYPDLFKEYFG 170
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
V+ DN ++ALNSAV++ GSF+Y+PKGV+ L +YFRIN + GQFERTLII DEG
Sbjct: 171 KVISYADNKFSALNSAVWSGGSFIYVPKGVKIEKPLQSYFRINTESMGQFERTLIIVDEG 230
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + Y+EGCTAP + LH+AVVE+ +YST+QNW I N VTKR
Sbjct: 231 ADIHYVEGCTAPTYSADSLHSAVVEIYIRKGGRCRYSTIQNW-------SNNILNLVTKR 283
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C + + W GS IT KYP+C+L+GE + G SIA + Q D+G KM+HL
Sbjct: 284 AVC-EDYAHMEWIDGNIGSKITMKYPACVLKGEGAKGTTISIAFAGEGQIQDAGAKMIHL 342
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A NT+S I+SK +S N TYRG V + A +++ +CD++++ N + TIPY
Sbjct: 343 APNTSSTIISKSLSRNGGNVTYRGIVEHGKNAKGAKSHVECDTIILDNVSKSDTIPYNIV 402
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
KN ++HEAT SK+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +
Sbjct: 403 KNDDVTIQHEATVSKVSEEQLFYLMSRGLTEEQATEMIVMGFIEPFAKELPMEYAVELNQ 462
Query: 479 LIDISLEGSVG 489
L+ + + GS+G
Sbjct: 463 LLKLEMNGSIG 473
>gi|227494627|ref|ZP_03924943.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Actinomyces coleocanis DSM 15436]
gi|226831809|gb|EEH64192.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Actinomyces coleocanis DSM 15436]
Length = 485
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 202/486 (41%), Positives = 291/486 (59%), Gaps = 18/486 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+T +++ + Y+YG+ T+ +GL E+++R ISA KNEP+WMLE RL ++
Sbjct: 17 PQTDEEIIN-SIGAYEYGWHDTDHYGANVERGLTEELVREISAIKNEPEWMLERRLKGFK 75
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W P W IDFD+ YY P V QS D++ PE+ TY++LGIP E+
Sbjct: 76 AWERKPLPKWGP-DLDYIDFDEFKYYVRPTDRVA-QSWDELPPEIKETYDRLGIPEAERN 133
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V +E+L+K GVIF+ + E+P++ +KY VP
Sbjct: 134 RLV------AGVAAQYESEVVYQQIQEDLEKQGVIFLDTDSGLREYPEIFEKYFGKAVPA 187
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN +AALN+A ++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y
Sbjct: 188 GDNKFAALNTAAWSGGSFIYVPPGVHVEIPLQAYFRINTEAMGQFERTLIIADEGSYVHY 247
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP D N LH+A+VE+ L +A ++Y+T+QNW + N VT+R
Sbjct: 248 VEGCTAPIYDTNSLHSAIVEIFVLKDARVRYTTIQNW-------STNVLNLVTQRAIV-E 299
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ W GSA+T KYP+C L GE + GE SI + Q D+G KM+H+A T+
Sbjct: 300 EGGTMEWIDGNIGSAVTMKYPACYLMGEHARGETLSIGFAGTGQHQDTGAKMVHMAPYTS 359
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I SK +S G +YRG V + A HS++ CD+LL+ T PY++ +
Sbjct: 360 SSITSKSVSRGGGRASYRGLVEIDEKAHHSKSNVLCDALLVDKISRTDTYPYVDVRTDDV 419
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+ HEAT SK+S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 420 EMGHEATVSKVSEDQLFYLMSRGLEEDEAMAMIVRGFVEPIARELPMEYALELNRLIELQ 479
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 480 MEGSVG 485
>gi|118576537|ref|YP_876280.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
gi|118195058|gb|ABK77976.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
Length = 470
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 205/485 (42%), Positives = 296/485 (61%), Gaps = 19/485 (3%)
Query: 7 TVDKVRKIDVDQYKYGFE--TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
T ++D KY F+ T++ V + KGL+++I+ IS K+EP WML++RL +Y
Sbjct: 3 TESTTDNFEMDYSKYDFKDSTDMYVHLSKKGLSKEIVESISKMKDEPQWMLDFRLRSYEI 62
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
++ P+W IDF ++YYYA DDV ++ T++KLGIP E++
Sbjct: 63 FMKKPMPTWG-ADLSTIDFQNIYYYAKASEKAEGD-WDDVPKDVKSTFDKLGIPEAEKKF 120
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A ++S +V + +E+LKK GV+F+ EA+ E P++++KY V+P
Sbjct: 121 LAG-------VGAQYESETVYHSLREDLKKQGVLFLDTGEAVKECPEILRKYFGKVIPPE 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN +AALNSAV++ GSF+Y+P GV M L YFRIN + GQFERTLII DEG+ V Y+
Sbjct: 174 DNKFAALNSAVWSGGSFIYVPPGVSIDMPLQAYFRINAQNMGQFERTLIILDEGAQVHYI 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP LH+AVVEL+A +A+++Y+T+QNW +YN VTKR
Sbjct: 234 EGCTAPVYSSESLHSAVVELIAHKDAKLRYTTIQNW-------SNDVYNLVTKRAYAY-E 285
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W GS IT KYP L G+++ GE S+A + G Q D+G KM+HLA NTTS
Sbjct: 286 GATVEWVDGNIGSKITMKYPGVYLMGQRAHGETLSVAFAGGGQHQDTGAKMVHLAPNTTS 345
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+I SK +S +TYRG ++V +GA ++ +CD+LL+ + T PY+E
Sbjct: 346 KITSKSVSRLDGRSTYRGLLNVAKGATGVKSTVRCDALLLDDTSKTDTYPYMEINQEDAT 405
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT KI DE +FY + RG EE A++LI+NGF+ ++LPME+AVE KLI + +
Sbjct: 406 ITHEATVGKIGDEQIFYLMTRGFNEEDALSLIINGFMEPFTKELPMEYAVEMNKLIKLEM 465
Query: 485 EGSVG 489
+ SVG
Sbjct: 466 DDSVG 470
>gi|213692465|ref|YP_002323051.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296454031|ref|YP_003661174.1| FeS assembly protein SufB [Bifidobacterium longum subsp. longum
JDM301]
gi|213523926|gb|ACJ52673.1| FeS assembly protein SufB [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|296183462|gb|ADH00344.1| FeS assembly protein SufB [Bifidobacterium longum subsp. longum
JDM301]
gi|320458610|dbj|BAJ69231.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis ATCC 15697]
Length = 499
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 198/488 (40%), Positives = 291/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + K +I Y YG+ + + A +G++E+++R ISA K EP WML+ RL
Sbjct: 28 EDKIKKDDEIISQFGDYNYGWHDSDAAGEAAKRGIDENVVRAISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P +S +++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIEKQA-KSWEELPDDIRNTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+LKK GVIF+ A+ E+P+LVKKY TVV
Sbjct: 146 KNRLV------SGVAAQYESEVIYNSIREDLKKQGVIFVDTDTAVREYPELVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVKGAYGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SKIS++ LFY + RG+ EE A +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKISEDQLFYLMSRGLTEEEARGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|328951402|ref|YP_004368737.1| FeS assembly protein SufB [Marinithermus hydrothermalis DSM 14884]
gi|328451726|gb|AEB12627.1| FeS assembly protein SufB [Marinithermus hydrothermalis DSM 14884]
Length = 467
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 200/474 (42%), Positives = 282/474 (59%), Gaps = 17/474 (3%)
Query: 17 DQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+YK+GF V KA KGLN ++ IS KNEP+WML++RL A + P+W
Sbjct: 10 SEYKWGFADPEKYVFKAEKGLNRRVVEAISYHKNEPEWMLKYRLKALEIFQKKPMPTWG- 68
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+D D++YYY P +S DDV E+ RT+++LGIP E+++LAG V
Sbjct: 69 ADLSQLDLDNIYYYVKPTDQRDARSWDDVPEEIKRTFDRLGIPEAERKVLAG-------V 121
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A +DS V KEEL++ GVIF+ I + + + DL K+Y TVVP DN +AALN+AV
Sbjct: 122 GAQYDSEMVYHRVKEELERQGVIFVSIEDGLKNYEDLFKEYFGTVVPPEDNKFAALNAAV 181
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSFVYIP GV + L YFR+N GQFERTLII DEG+ V Y+EGCTAP +
Sbjct: 182 WSGGSFVYIPPGVEVELPLQAYFRVNTAELGQFERTLIIVDEGAKVHYIEGCTAPTYSTD 241
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
H+ V+E+V A +Y+T+QNW +YN VT+R + W
Sbjct: 242 SFHSGVIEIVVKKGATSRYTTIQNW-------SHNMYNLVTQRAVVH-QDAYHMWLDGNL 293
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L + + SIA ++ Q D+G K++ A +T+ IVSK IS G
Sbjct: 294 GSKVTMKYPSSYLIEPGARSDILSIAFASTGQHQDTGGKLIFAAPHTSGSIVSKSISRGS 353
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+YRG + VH GA H++ +CD+LLI T PY+E + + ++ HEAT S+++
Sbjct: 354 GRASYRGLIKVHEGATHAKVNVECDALLINEESRTDTYPYMEIEEETASVGHEATVSRLN 413
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+ E+ A ALIV GF+ V ++LP+E+AVE +LI++ +EGSVG
Sbjct: 414 DEQIFYLQSRGLEEDEAAALIVRGFIEPVAKELPLEYAVELNRLIELEMEGSVG 467
>gi|322517567|ref|ZP_08070436.1| FeS assembly protein SufB [Streptococcus vestibularis ATCC 49124]
gi|322123827|gb|EFX95401.1| FeS assembly protein SufB [Streptococcus vestibularis ATCC 49124]
Length = 489
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 209/490 (42%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ +YKYGF ++ V KG++ED++R +SA+K EP+WMLE+RL
Sbjct: 18 MTETNEKVE-PKPIDLGEYKYGFHDDVTPVFSTGKGISEDVVRAMSAEKGEPEWMLEFRL 76
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W I+FDDL Y+ + +DV ++ T+E++GIP
Sbjct: 77 KSLETFNKMAMQEWGP-DLSGINFDDLTYFQKASDKPA-RDWEDVPEKIKETFERIGIPE 134
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G+IF A+ EHP+L KKY S
Sbjct: 135 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPELFKKYFSK 187
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN +AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + T QFERTLII DEG+
Sbjct: 188 LVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGA 247
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ ALD A ++YST+QNW +YN VTKR
Sbjct: 248 SVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNW-------SDSVYNLVTKRA 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ +T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 301 TAK-KNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNA 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 360 PHTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIH 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 420 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 479
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 480 ISYEMEGSVG 489
>gi|294503593|ref|YP_003567655.1| hypothetical protein YPZ3_1483 [Yersinia pestis Z176003]
gi|294354052|gb|ADE64393.1| hypothetical protein YPZ3_1483 [Yersinia pestis Z176003]
Length = 475
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 281/483 (58%), Positives = 356/483 (73%), Gaps = 30/483 (6%)
Query: 28 QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY 87
D+ KG+NE+++R ISAK+NEP+WMLE+RL AYR WL M++P W + Y +D+ D
Sbjct: 2 ATDELAKGINEEVVRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHWLKAHYQGLDYQDYS 61
Query: 88 YYAAPKSIVGPQSLDDVD---------------------PELLRTYEKLGIPIREQEILA 126
YY+AP + D E+ + +LGIP+RE
Sbjct: 62 YYSAPSCGSCDDNCDSQPGAVQQSSADGSAPSNANEYLTAEVESAFAQLGIPVRE----- 116
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
++VAVDA+FDSVSV TT++E+L G++F EAI E+PDLV+KYL +VVP DN
Sbjct: 117 ---GAEVAVDAIFDSVSVATTYREKLAGQGILFCSFGEAIQEYPDLVQKYLGSVVPAKDN 173
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
F+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IADEGSYVSY+EG
Sbjct: 174 FFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADEGSYVSYIEG 233
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
C+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI NFVTKR C G S
Sbjct: 234 CSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGS-DSTGGILNFVTKRALCEGEGS 292
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
K+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A++NG+QQ D+GTKM+H+ KNT S I
Sbjct: 293 KMSWTQSETGSAITWKYPSVILQGDNSVGEFFSVALTNGYQQADTGTKMIHIGKNTKSTI 352
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT PY+E +N++ LE
Sbjct: 353 IAKGISAGHSQNTYRGLVKILPGADNARNFTQCDSMLIGPDSGAHTFPYVEVRNNTAQLE 412
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEATTSKI D+ LFYCLQRGI E+ AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE
Sbjct: 413 HEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEH 472
Query: 487 SVG 489
SVG
Sbjct: 473 SVG 475
>gi|307326008|ref|ZP_07605206.1| FeS assembly protein SufB [Streptomyces violaceusniger Tu 4113]
gi|306888230|gb|EFN19218.1| FeS assembly protein SufB [Streptomyces violaceusniger Tu 4113]
Length = 473
Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats.
Identities = 195/490 (39%), Positives = 294/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y+YG+ ++++ A +GL+ED++R IS KK+EP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGNYEYGWADSDVAGASAKRGLSEDVVRDISGKKSEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ DD+ ++ TY+KLGIP
Sbjct: 60 KGLKLFGKKPMPTWGS-DLSGIDFDNIKYFVRSTEQQAAS-WDDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFQEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPAGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S IVSK ++ G +YRG + + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PRTSSNIVSKSVARGGGRTSYRGLIEIGEGAEGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSDDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|260584058|ref|ZP_05851806.1| FeS assembly protein SufB [Granulicatella elegans ATCC 700633]
gi|260158684|gb|EEW93752.1| FeS assembly protein SufB [Granulicatella elegans ATCC 700633]
Length = 464
Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats.
Identities = 199/476 (41%), Positives = 281/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+++ YKYGF ++ V + GL+E+++R IS KNEP+WMLE+RL + + + M +W
Sbjct: 6 ELEDYKYGFHEDVTPVFDSGVGLSEEVVRTISKMKNEPEWMLEFRLKSLKAFEKMPMQTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + Y+ +S DDV ++ T+EK+GIP E+ LAG
Sbjct: 66 G-ADLSDIDFDAITYFKRASDKPA-RSWDDVPEKIKDTFEKIGIPEAERAYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A F+S V KEE K G++F A+ E+P+L +KY + +VP DN AALNS
Sbjct: 120 ---AQFESEVVYHNMKEEFDKLGIVFTDTDSALKEYPELFEKYFAKLVPPTDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGV+C + L TYFRIN++ GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVKCDVPLQTYFRINDQNMGQFERTLIIVDEGASVHYVEGCTAPTYS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ + +Y+T+QNW +YN VTKR + W
Sbjct: 237 SNSLHAAIVEIFVEEGGYCRYTTIQNW-------SDNVYNLVTKRARA-AAHGTVEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G + G SIA + Q D+G KM+H A +T+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSVFLEGPYAKGTMLSIAFAGEGQHQDTGAKMIHNAPHTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + + +S + +CD++++ + + TIP+ E N LEHEA SK
Sbjct: 349 DGGVVNYRGQVTFSKKSDYSISHIECDTIIMDDLSKSDTIPFNEIHNDKVALEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E LFY + RGI E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLFYLMSRGISESEATEMIVMGFVEPFTKELPMEYAVELNRLIAYEMEGSVG 464
>gi|219847877|ref|YP_002462310.1| FeS assembly protein SufB [Chloroflexus aggregans DSM 9485]
gi|219542136|gb|ACL23874.1| FeS assembly protein SufB [Chloroflexus aggregans DSM 9485]
Length = 471
Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats.
Identities = 205/481 (42%), Positives = 280/481 (58%), Gaps = 20/481 (4%)
Query: 13 KIDVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+ D +YGF V KAPKGLNE I+R +S K EP+WML+ RL A + P
Sbjct: 7 NLQFDYSRYGFRQEERYVYKAPKGLNERIVRELSGMKGEPEWMLKRRLRALEIFNKKPTP 66
Query: 72 ---SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
WA +++DD++Y+ D V PE+ T+E+LGIP E++ LAG
Sbjct: 67 LVGMWANPELAELNYDDIHYFVRANERPQTD-WDAVPPEIKNTFERLGIPEAERKFLAG- 124
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A ++S V + +EE K GVIF+ A+ E+P+ K+Y T+VP DN Y
Sbjct: 125 ------VGAQYESEVVYHSLREEWAKQGVIFLDTDTALKEYPEFFKEYFGTIVPAADNKY 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALN+AV++ GSFVY+PKGV+ + L YFRIN + GQFERTLII DEG+ Y+EGCT
Sbjct: 179 AALNTAVWSGGSFVYVPKGVKVDIPLQAYFRINAERMGQFERTLIIIDEGAEAHYIEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP N LH+AVVE++ + +Y+T+QNW I+N VTKR + +
Sbjct: 239 APIYSTNSLHSAVVEVIVKKGGKFRYTTIQNWA-------NNIFNLVTKRAVAYEE-ASM 290
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS +T KYPS L G ++ GE S+A + Q D+G KM+HLA TTSRI +
Sbjct: 291 EWVDGNIGSKLTMKYPSVYLMGRKARGEVLSVAYAGRGQHQDAGAKMVHLAPETTSRITN 350
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K +S TYRG V GA ++ CD+L++ N + TIPYIE + C L HE
Sbjct: 351 KSVSKDGGKTTYRGLAKVAPGAYGAKINVNCDALILDENSASDTIPYIEIEEDRCTLAHE 410
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AT +I E LFY + RGI E A+++IV GF+ ++LPME+AVE +LI + +EGSV
Sbjct: 411 ATVGRIGAEQLFYLMSRGISESDALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSV 470
Query: 489 G 489
G
Sbjct: 471 G 471
>gi|315425466|dbj|BAJ47129.1| Fe-S cluster assembly protein SufB [Candidatus Caldiarchaeum
subterraneum]
Length = 466
Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 190/478 (39%), Positives = 275/478 (57%), Gaps = 18/478 (3%)
Query: 13 KIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
K+++D KY F+ + V K+ GL+E ++ IS K+EP+W+ ++RL + + P
Sbjct: 6 KLEIDYSKYDFKDPELYVYKSKPGLSEKVVEEISQHKDEPEWLRKFRLKSLEIFYRKPMP 65
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
W +DFD ++YY P S +S D+V + +T+++LGIP E++ LAG
Sbjct: 66 IWG-ADLSGVDFDRIHYYIKP-SDRKARSWDEVPEYIKKTFDRLGIPEAERKFLAG---- 119
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
V A ++S V + ++EL+K GVIF+ A E+ D+ K Y VVP DN +AAL
Sbjct: 120 ---VGAQYESEVVYHSLQKELEKKGVIFVDPDTAFREYADIFKPYFGKVVPPDDNKFAAL 176
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
NSAVF+ GSF+Y+P+GV L YFRIN GQFERTLIIA+ S V Y+EGCTAP
Sbjct: 177 NSAVFSGGSFIYVPEGVEIQYPLQAYFRINAANVGQFERTLIIAEPYSRVHYIEGCTAPI 236
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ LH AVVE+VA A ++Y+T+QNW +YN VTKR + + W
Sbjct: 237 YSTSSLHTAVVEIVAKKGAYVRYTTLQNW-------SSDVYNLVTKRAHAYEE-ATVEWV 288
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS +T KYPS L G + + S+A + Q D+G K +HLA +TTSRI SK +
Sbjct: 289 DANIGSRVTMKYPSVYLLGRGAKADILSVAFAGRGQHQDTGAKAVHLAPDTTSRITSKSV 348
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
+YRG + V +GA ++ +CD+L++ + T PY E HEAT
Sbjct: 349 CKDGGRTSYRGLLHVAKGAKRVKSSVRCDALILDDISRTDTYPYNEINEEDTTATHEATV 408
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
KI +E LFY + RG+ E+ A+ +IV GF+ + LPME+AVE +LI++ + GSVG
Sbjct: 409 GKIGEEQLFYLMSRGLSEQEALNMIVLGFLEPFTKTLPMEYAVEFNRLIELEMSGSVG 466
>gi|257068628|ref|YP_003154883.1| Iron-regulated ABC transporter membrane component SufB
[Brachybacterium faecium DSM 4810]
gi|256559446|gb|ACU85293.1| Iron-regulated ABC transporter membrane component SufB
[Brachybacterium faecium DSM 4810]
Length = 475
Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 200/491 (40%), Positives = 297/491 (60%), Gaps = 18/491 (3%)
Query: 1 MVAVRETVDKVRKID-VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + E + + ID + QY YG+ + A +GL+E+++R ISA+K+EP+WMLE R
Sbjct: 1 MTSAPEKLTQDEIIDSMGQYAYGWHDEDSAGASARRGLSEEVVRDISARKDEPEWMLERR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A + + P+W I FD + Y+ +D+ ++ TY++LGIP
Sbjct: 61 LKALKLFDKKPLPTWGP-DLSGIAFDHIKYFVRSTEKQATS-WEDLPEDIKETYDRLGIP 118
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E++ L V A ++S V +E+L++ GV+F+ A+ EHP+L K+Y
Sbjct: 119 EAEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALKEHPELFKEYFG 172
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
TV+P GDN ++ALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEG
Sbjct: 173 TVIPSGDNKFSALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEG 232
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
SYV Y+EGCTAP + LH+AVVE++ +A ++Y+T+QNW +YN VTKR
Sbjct: 233 SYVHYVEGCTAPIYQSDSLHSAVVEIIVKKDARVRYTTIQNW-------SNNVYNLVTKR 285
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ W GS +T KYP+ L GE + GE S+A + Q D+G+KM+H+
Sbjct: 286 TTV-EQGGVMEWVDGNIGSKVTMKYPAVWLMGEHARGETLSVAFAGEGQNQDTGSKMVHM 344
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +T+S IVSK +S ++YRG V V GA HS + CD+LL+ T PY++
Sbjct: 345 APHTSSSIVSKSVSRSGGRSSYRGLVQVMPGAEHSASTVLCDALLVDQISRTDTYPYVDV 404
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ + HEAT SK+S+E LFY + RG+ E A+A+IV GF+ + ++LPME+A+E +
Sbjct: 405 RVDDVQMGHEATVSKVSEEQLFYLMSRGMEETEAMAMIVRGFIEPIARELPMEYALELNR 464
Query: 479 LIDISLEGSVG 489
LI++ +EG+VG
Sbjct: 465 LIELQMEGAVG 475
>gi|228476505|ref|ZP_04061195.1| FeS assembly protein SufB [Streptococcus salivarius SK126]
gi|228251926|gb|EEK10972.1| FeS assembly protein SufB [Streptococcus salivarius SK126]
Length = 472
Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 209/490 (42%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ +YKYGF ++ V KG++ED++R +SA+K EP+WMLE+RL
Sbjct: 1 MTETNEKVE-PKPIDLGEYKYGFHDDVTPVFSTGKGISEDVVRAMSAEKGEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W I+FDDL Y+ + +DV ++ T+E++GIP
Sbjct: 60 KSLETFNKMAMQEWGP-DLSGINFDDLTYFQKASDKPA-RDWEDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G+IF A+ EHP+L KKY S
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPELFKKYFSK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN +AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + T QFERTLII DEG+
Sbjct: 171 LVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ ALD A ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNW-------SDSVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ +T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|315226494|ref|ZP_07868282.1| FeS assembly protein SufB [Parascardovia denticolens DSM 10105]
gi|315120626|gb|EFT83758.1| FeS assembly protein SufB [Parascardovia denticolens DSM 10105]
Length = 534
Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 200/488 (40%), Positives = 294/488 (60%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKID--VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + I +Y YG+ ++ + A KG++E ++R ISA K EP WML++RL
Sbjct: 63 EEKLKQDDDIIAQFGEYNYGWHDSDVAGEAAKKGIDEQVVRDISADKGEPQWMLDYRLRG 122
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y+ +L P+W + DD YY P +S D++ ++ TY++LGIP E
Sbjct: 123 YQAFLEKPMPTWG-VDLSGFHADDFKYYVKPIDKQA-KSWDELPTDIRNTYDRLGIPGAE 180
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+LKK GVIF+ A+ ++PDLVKKY +TV+
Sbjct: 181 KKRLV------SGVAAQYESEVIYNSIREDLKKQGVIFVDTDTAVRDYPDLVKKYFATVI 234
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN +AALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 235 PPDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 294
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA VE++ NA ++Y+TVQNW +YN VT+R
Sbjct: 295 HYVEGCTAPIWSEDSLHAANVEIIVEKNARVRYTTVQNW-------SNNVYNLVTQRAYV 347
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S+ + Q D+G KM+HLA +
Sbjct: 348 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETLSLGFAGRGQYQDTGAKMIHLAPH 406
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + GA S + CD+LL+ + + T P+++ +
Sbjct: 407 TSSTIVAKSISRGGGRSAYRGLVKIVDGAKGSSSSVVCDALLVDDYSRSDTYPHVDVRED 466
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RGI E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 467 DVSMAHEATVSKVSEDQLFYLMSRGIEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 526
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 527 LQMEGSVG 534
>gi|296117934|ref|ZP_06836517.1| FeS assembly protein SufB [Corynebacterium ammoniagenes DSM 20306]
gi|295969165|gb|EFG82407.1| FeS assembly protein SufB [Corynebacterium ammoniagenes DSM 20306]
Length = 481
Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 201/489 (41%), Positives = 292/489 (59%), Gaps = 18/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ T D++ + + Y++G+ + A +G+NED++R ISA+KNE +WMLE RL
Sbjct: 10 TEKKMTDDEIIE-SIGAYEFGWHDSDAAGAAARRGINEDVVRDISAQKNESEWMLEQRLK 68
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A R + P W IDFD++ YY Q+ +D+ ++ TY+KLGIP
Sbjct: 69 ALRMFDKKPMPKWG-ADLSGIDFDNIKYYVKSTEKQA-QTWEDLPDDIKETYDKLGIPEA 126
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y TV
Sbjct: 127 EKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGTV 180
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN ++ALNSAV++ GSF+Y+P GV + L YFRIN + GQFERTLII DE +Y
Sbjct: 181 IPAGDNKFSALNSAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAY 240
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 241 VHYVEGCTAPIYKSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRTK 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ W GS +T KYP+ + G + GE S+A + Q D+G KM HLA
Sbjct: 294 V-EEGGTMEWVDGNIGSKVTMKYPAVWMMGPHAKGEVLSVAFAGEGQFQDTGAKMKHLAP 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T+S IVSK ++ G YRG + VH A HS + +CD+LL+ + + T PY + +N
Sbjct: 353 HTSSNIVSKSVARGGGRAAYRGLIEVHPNAHHSYSNVECDALLVDSISRSDTYPYNDIRN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
L HEAT S++S+E LFY + RGI EE A+A+IV GFV + ++LPME+A+E +LI
Sbjct: 413 DYVTLGHEATVSQVSEEQLFYLMSRGIQEEEAMAMIVRGFVEPIAKELPMEYALELNRLI 472
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 473 ELQMEGSVG 481
>gi|291299940|ref|YP_003511218.1| FeS assembly protein SufB [Stackebrandtia nassauensis DSM 44728]
gi|290569160|gb|ADD42125.1| FeS assembly protein SufB [Stackebrandtia nassauensis DSM 44728]
Length = 477
Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats.
Identities = 187/475 (39%), Positives = 292/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+++Y+YG+ + A +GL+E ++R ISAKK+EP WML+ RL + + P W
Sbjct: 19 LEKYEYGWADSDAAGAAAQRGLSEAVVRDISAKKDEPQWMLDLRLKGLKLFGKKPMPGWG 78
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 79 -ADLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDKLGIPEAEKQRLV------AG 130
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +++L++ GV+F+ A+ EHP++ ++Y +V+PVGDN +A+LN+A
Sbjct: 131 VAAQYESEVVYHKIRDDLEEKGVLFLDTDTALKEHPEIFQEYFGSVIPVGDNKFASLNTA 190
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLII DEG+YV Y+EGCTAP
Sbjct: 191 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYSS 250
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAVA-EEGATMEWVDGN 302
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ ++ GE + GE S+A++ Q D+G KM H A +T+S I+S+ I+ G
Sbjct: 303 LGSKVTMKYPAVVMTGEHAKGEVLSVAMAGEGQHQDAGAKMTHAAPHTSSSIISRSIARG 362
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V+ G+ HS++ +CD+LL+ + T PY++ + + HEAT SKI
Sbjct: 363 GGRTSYRGLVQVNEGSHHSKSTVKCDALLVDTISRSDTYPYVDVREDDVQMGHEATVSKI 422
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A+IV GF+ + ++LPME+A+E +LI++ +EG+VG
Sbjct: 423 SDDQLFYLMSRGLTEDEAMAMIVRGFIEPIAKELPMEYALELNRLIELQMEGAVG 477
>gi|328881604|emb|CCA54843.1| Iron-sulfur cluster assembly protein SufB [Streptomyces venezuelae
ATCC 10712]
Length = 471
Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats.
Identities = 195/487 (40%), Positives = 295/487 (60%), Gaps = 17/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + + +Y+YG+ +++ A +GLNED++R IS+KKNEP+WML+ RL
Sbjct: 1 MTTEISHPELEGLGRYEYGWADSDAAGATAKRGLNEDVVRDISSKKNEPEWMLKLRLKGL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP E+
Sbjct: 61 RLFDKKPMPTWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPEAEK 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ L V A ++S V +E+L++ GVIF+ A+ EH +L K+Y TV+P
Sbjct: 119 QRLV------AGVAAQYESEVVYHQIREDLEEQGVIFVDTDTALKEHEELFKEYFGTVIP 172
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
VGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +YV
Sbjct: 173 VGDNKFASLNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDAYVH 232
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 233 YVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAVAY 285
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A NT
Sbjct: 286 -EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMAPNT 344
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK ++ G +YRG + + GA S++ CD+LL+ + T PY++ +
Sbjct: 345 SSNIVSKSVARGGGRTSYRGLIEIGEGAPGSKSNVLCDALLVDTISRSDTYPYVDVREDD 404
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 405 VSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRLIEL 464
Query: 483 SLEGSVG 489
+EG+VG
Sbjct: 465 QMEGAVG 471
>gi|320334856|ref|YP_004171567.1| FeS assembly protein SufB [Deinococcus maricopensis DSM 21211]
gi|319756145|gb|ADV67902.1| FeS assembly protein SufB [Deinococcus maricopensis DSM 21211]
Length = 467
Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats.
Identities = 195/473 (41%), Positives = 289/473 (61%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
QY+YG+ + KAPKGL+ +++ IS K EP WML++RL A + + + P W
Sbjct: 12 QYEYGWSNPEKYAIKAPKGLSREVVEMISKAKEEPQWMLDFRLKALDIFYSKRMPEWG-A 70
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
++ D++YYY P+ +S DDV ++ T+E+LGIP E+ LAG V
Sbjct: 71 DLSGLNLDEIYYYIKPEGYNA-RSWDDVPEDVKLTFERLGIPEAERAALAG-------VG 122
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE +K GV+F+ I + + ++P+L +++ +TVVP DN +AA+NSAV+
Sbjct: 123 AQYESEMVYHNLKEEWEKLGVVFLSIEDGLRQYPELFREHFATVVPPEDNKFAAINSAVW 182
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSFVY+PKGV+ + L TYFRIN + +GQFERTLII DEG+ Y+EGCTAP + +
Sbjct: 183 SGGSFVYVPKGVKVDIPLQTYFRINAESSGQFERTLIIVDEGAQAHYIEGCTAPAYNSDS 242
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
H+ V+E++ A +YST+QNW +YN VT+R G + W G
Sbjct: 243 FHSGVIEIIVKPGARFRYSTIQNW-------SHNVYNLVTQRAAVYG-NGVMEWVDGNLG 294
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C L E + GE SIA++ Q D+G K++H A +T+ IVSK IS
Sbjct: 295 SKVTMKYPACYLLEEGARGEVLSIAMAGRGQHQDAGAKIVHFAPHTSGTIVSKSISKDSG 354
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
++YRG V ++ GA S+ +CD+LL+ T PYIE + ++ HEAT SKI+D
Sbjct: 355 RSSYRGLVKIYEGARGSKTNVECDALLLDEEARTDTYPYIEIEEKDASVGHEATVSKIND 414
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E + Y RG+ E+ A LIV GF+ + ++LP+E+AVE +LI++ +EGSVG
Sbjct: 415 EQILYLQSRGLSEDEAAGLIVRGFIEPIAKELPLEYAVELNRLIELEMEGSVG 467
>gi|55822156|ref|YP_140597.1| hypothetical protein str0168 [Streptococcus thermophilus CNRZ1066]
gi|38679247|gb|AAR26261.1| SufB [Streptococcus thermophilus]
gi|55738141|gb|AAV61782.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|312277588|gb|ADQ62245.1| ABC-type Fe-S cluster assembly transporter, permease component,
putative [Streptococcus thermophilus ND03]
Length = 472
Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats.
Identities = 209/490 (42%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ +YKYGF ++ V KG++ED++R +SA+K EP+WMLE+RL
Sbjct: 1 MTETNEKVE-PKPIDLGEYKYGFRDDVTPVFSTGKGISEDVVRAMSAEKEEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W I+FDDL Y+ + +DV ++ T+E++GIP
Sbjct: 60 KSLETFNKMAMQEWGP-DLSGINFDDLTYFQKASDKPA-RDWEDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G+IF A+ EHP+L KKY S
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPELFKKYFSK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN +AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + T QFERTLII DEG+
Sbjct: 171 LVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ ALD A ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ +T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|312864066|ref|ZP_07724302.1| FeS assembly protein SufB [Streptococcus vestibularis F0396]
gi|311100479|gb|EFQ58686.1| FeS assembly protein SufB [Streptococcus vestibularis F0396]
Length = 472
Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats.
Identities = 209/490 (42%), Positives = 295/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ +YKYGF ++ V KG++ED++R +SA+K EP+WMLE+RL
Sbjct: 1 MTETNEKVE-PKPIDLGEYKYGFHDDVTPVFSTGKGISEDVVRAMSAEKGEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W A++FDDL Y+ + +DV ++ T+E++GIP
Sbjct: 60 KSLETFNKMAMQEWGP-DLSALNFDDLTYFQKASDKPA-RDWEDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G+IF A+ EHP+L KKY S
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPELFKKYFSK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN +AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + T QFERTLII DEG+
Sbjct: 171 LVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ ALD A ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNW-------SDSVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ +T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|55820266|ref|YP_138708.1| hypothetical protein stu0168 [Streptococcus thermophilus LMG 18311]
gi|55736251|gb|AAV59893.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 472
Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats.
Identities = 209/490 (42%), Positives = 294/490 (60%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M E V+ + ID+ +YKYGF ++ V KG++ED++R +SA+K EP+WMLE+RL
Sbjct: 1 MTETNEKVE-PKPIDLGEYKYGFRDDVTPVFSTGKGISEDVVRAMSAEKEEPEWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W I+FDDL Y+ + +DV ++ T+E++GIP
Sbjct: 60 KSLETFNKMAMQEWGP-DLSGINFDDLTYFQKASDKPA-RDWEDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G+IF A+ EHP+L KKY S
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPELFKKYFSK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN +AALNSA ++ G+F+Y+PKGV+ + L TYFRIN + T QFERTLII DEG+
Sbjct: 171 LVPPTDNKFAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ ALD A ++YST+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYTTASLHAAIVEIFALDGAYMRYSTIQNW-------SDNVYNLVTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + W G+ +T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 284 TAK-KNATVEWIDGNLGAEVTMKYPSVYLDGEGARGTMLSIAFANTGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIARNGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +L
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 463 ISYEMEGSVG 472
>gi|270283931|ref|ZP_05965228.2| FeS assembly protein SufB [Bifidobacterium gallicum DSM 20093]
gi|270277720|gb|EFA23574.1| FeS assembly protein SufB [Bifidobacterium gallicum DSM 20093]
Length = 509
Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats.
Identities = 194/488 (39%), Positives = 287/488 (58%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + I +Y YG+ + + A KG++E ++R ISA K+EP+WML+ RL
Sbjct: 38 EEKIKQDDAIIDQFGEYTYGWHDSDAAGEAAKKGIDEQVVREISADKHEPEWMLDMRLKG 97
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ M P W + + DD YY P +D+ ++ TY++LGIP E
Sbjct: 98 YRAFVDMPMPDWG-VDLTGFNADDFKYYVKPVGKQAAT-WEDLPDDIRTTYDRLGIPEAE 155
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +E+L GVIF+ A+ E+P+LV+K+ VV
Sbjct: 156 KSRLV------SGVAAQYESEVIYNSIQEDLAAQGVIFVDTDTAVREYPELVRKWFGKVV 209
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 210 PPDDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 269
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LHAA+VE+V NA ++Y+TVQNW +YN VT+R
Sbjct: 270 HYVEGCTAPIYSTDSLHAAIVEIVVEKNARVRYTTVQNW-------SNNVYNLVTQRAYV 322
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 323 R-EGGTMEWVDGNIGSKATMKYPACILAEPYANASTMSLGFAGAGQYQDTGAKMIHLAPH 381
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + GA S + CD+LL+ + + T P+++ +
Sbjct: 382 TSSTIVAKSISRGGGRSAYRGLVKIVEGAEGSSSNVVCDALLVDDFSRSDTYPHVDVRED 441
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L++
Sbjct: 442 DVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMAMIVRGFVEPISRELPMEYALELNRLVE 501
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 502 LQMEGSVG 509
>gi|89898761|ref|YP_515871.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
felis Fe/C-56]
gi|89332133|dbj|BAE81726.1| ABC transporter [Chlamydophila felis Fe/C-56]
Length = 484
Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats.
Identities = 282/487 (57%), Positives = 377/487 (77%), Gaps = 4/487 (0%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++++ + D Y YGF T I+ + KGL E+ I+ IS +NEP ++L++RL AYR
Sbjct: 1 MSQSIEDFLQ-TQDDYPYGFVTPIESEGLTKGLREETIKKISQLRNEPSFILDFRLKAYR 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W +++P+WAR++Y ID++D+ Y++APK L++ DPE+L T++KLGIP+ EQ+
Sbjct: 60 HWKKLQEPAWARLKYSPIDYEDIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQK 119
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V VA+D VFDSVS+ TTFKE L K+GVIF +SEAI EHPDL+KKYL +VV
Sbjct: 120 RLLNV--KNVALDLVFDSVSIGTTFKEALDKAGVIFCSMSEAIREHPDLIKKYLGSVVSY 177
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN++AALN+AVF+DGSFVYIPKGVRCPME+STYFRIN+K +GQFERTLIIA++ S+VSY
Sbjct: 178 RDNYFAALNAAVFSDGSFVYIPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSY 237
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ-GKGGIYNFVTKRGDCR 302
LEGCTAP NQLHAAVVELVA + A ++YSTVQNW+ GD + GKGG+YNFVTKRG C
Sbjct: 238 LEGCTAPSYSSNQLHAAVVELVAHERAVVRYSTVQNWFSGDKKTGKGGVYNFVTKRGLCA 297
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +SKISW+Q+E G+AITWKYPSC+LRG++S GEF+SIA++NG Q D+GTKM+H+ + T
Sbjct: 298 GYKSKISWSQVEVGAAITWKYPSCILRGKESVGEFFSIALTNGKMQADTGTKMIHVGEKT 357
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS IVSKGIS+ S+NT+R VS+ +GA SRN+TQCDS+LIG CGA+T P I +N+
Sbjct: 358 TSTIVSKGISSDESHNTFRSLVSISKGAVGSRNYTQCDSMLIGQTCGAYTDPKISVENTM 417
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++EHEATTSK+ + L Y RG+ E A++L+V+GF RE++++LP+EFA EA KL+ +
Sbjct: 418 SSVEHEATTSKLRADQLMYLRSRGLSAEEAVSLVVHGFCREIIEQLPLEFAREASKLLFV 477
Query: 483 SLEGSVG 489
LE SVG
Sbjct: 478 KLENSVG 484
>gi|297242847|ref|ZP_06926785.1| cysteine desulfurase activator SufB [Gardnerella vaginalis AMD]
gi|296889058|gb|EFH27792.1| cysteine desulfurase activator SufB [Gardnerella vaginalis AMD]
Length = 525
Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 198/488 (40%), Positives = 295/488 (60%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKI--DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + +I + Y YG+ + + A KG++E ++R ISA K+EP+WML RL
Sbjct: 54 EEKIRQDEQIVAEFGDYNYGWHDSDAAGEAAKKGIDESVVRAISADKHEPEWMLNLRLQG 113
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR +L P W + D DD YY P ++ DD+ ++ +TY++LGIP E
Sbjct: 114 YRAFLQKPMPDWG-VDLSGFDADDFKYYVRPVHDQA-KTWDDLPEDIRKTYDRLGIPEAE 171
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+L GVIF+ A+ ++P+LVKKY +TV+
Sbjct: 172 KKRLV------SGVAAQYESEVIYNSIREDLAAQGVIFVDTDTAVQKYPELVKKYFATVI 225
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PV DN +AALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 226 PVDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 285
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LHAA VE+V +A ++Y+TVQNW +YN VT+R
Sbjct: 286 HYVEGCTAPIYSTDSLHAANVEIVVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 338
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S++ + Q D+G KM+HLA +
Sbjct: 339 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLSFAGRGQYQDTGAKMIHLAPH 397
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S + CD+LL+ + + T P+++ +
Sbjct: 398 TSSTIVAKSISRGGGRSAYRGLVKIIKGAKGSSSSVVCDALLVDDFSRSDTYPHVDVRED 457
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 458 DVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 517
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 518 LQMEGSVG 525
>gi|156740330|ref|YP_001430459.1| FeS assembly protein SufB [Roseiflexus castenholzii DSM 13941]
gi|156231658|gb|ABU56441.1| FeS assembly protein SufB [Roseiflexus castenholzii DSM 13941]
Length = 471
Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats.
Identities = 199/481 (41%), Positives = 280/481 (58%), Gaps = 20/481 (4%)
Query: 13 KIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+D D KY F + K+ KGLNE ++R +S K EP+WML+ RL A + P
Sbjct: 7 NLDFDYSKYAFRNEERYIFKSDKGLNEKVVRELSGMKGEPEWMLKRRLQALEIFRKKPTP 66
Query: 72 ---SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
WA +++D+++Y+ D V E+ +T+E+LGIP E++ LAG
Sbjct: 67 LTGMWANPELAELNYDEIHYFVRAGERPQTD-WDAVPAEIKQTFERLGIPEAERKFLAG- 124
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A ++S V + +EE K GVIF+ + E+P++ KKY TVVP DN Y
Sbjct: 125 ------VGAQYESEVVYHSLREEWAKQGVIFLDTDTGLKEYPEIFKKYFGTVVPAADNKY 178
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLII +EG+ V Y+EGCT
Sbjct: 179 AALNTAVWSGGSFVYVPKGVHVDIPLQAYFRINAENMGQFERTLIIVEEGASVHYIEGCT 238
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP N LH+AVVE++ + + +Y+T+QNW I+N VTKR + +
Sbjct: 239 APIYSTNSLHSAVVEIIVMKGGKCRYTTIQNWA-------NNIFNLVTKRAIAYEE-ASM 290
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS +T KYPS L G + GE S+A + Q D+G KM+H+A +TTSRI +
Sbjct: 291 EWVDGNIGSRLTMKYPSVYLMGRGARGEVLSVAYAGKGQHQDAGAKMVHIAPDTTSRITN 350
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K +S TYRG V GA ++ CD+L++ + TIPYIE + C L HE
Sbjct: 351 KSVSKNGGKTTYRGLAKVMPGATGAKINVNCDALILDEKSASDTIPYIEIEEDRCTLAHE 410
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AT +I +E LFY + RGI E A+++IV GF+ ++LPME+AVE +LI + +EGSV
Sbjct: 411 ATVGRIGEEQLFYLMSRGIGEADALSMIVLGFMEPFTRELPMEYAVELNRLIQLEMEGSV 470
Query: 489 G 489
G
Sbjct: 471 G 471
>gi|329764691|ref|ZP_08256287.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138837|gb|EGG43077.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 469
Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats.
Identities = 205/482 (42%), Positives = 295/482 (61%), Gaps = 19/482 (3%)
Query: 10 KVRKIDVDQYKYGFE--TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+++D KY F+ T++ V + KGL+++ + IS K+EP WML++RL +Y ++
Sbjct: 5 ATENLNMDYAKYDFKDSTDLYVHLSKKGLSKETVIAISKMKDEPQWMLDFRLRSYEIFMK 64
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+W IDF ++YYYA ++ DDV E+ T++KLGIP E++ LAG
Sbjct: 65 KPMPTWGG-DLSVIDFQNIYYYAKATEKTE-KNWDDVPAEVKATFDKLGIPEAEKKFLAG 122
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V A ++S V + +E+L K GV+F+ A+ ++P++ KKY ++P DN
Sbjct: 123 -------VGAQYESEVVYHSLREDLAKQGVLFLDTDSALKQYPEIFKKYFGKIIPPEDNK 175
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AALNSAV++ GSF+YIP GV+ M L YFRIN + GQFERTLIIADEGS V Y+EGC
Sbjct: 176 FAALNSAVWSGGSFIYIPPGVKVDMPLQAYFRINAENIGQFERTLIIADEGSEVHYIEGC 235
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP LH+AVVELVA +A+++Y+T+QNW +YN VTKR +
Sbjct: 236 TAPVYSSESLHSAVVELVAHKDAKLRYTTIQNW-------SSDVYNLVTKRAYAY-EGAT 287
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYP L GE++ GE SIA + Q D+G KM+HLA NTTS+I
Sbjct: 288 VEWIDGNIGSKLTMKYPGIYLLGERAYGETLSIAFAGKGQHQDTGAKMVHLAPNTTSKIT 347
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK +S +TYRG ++V +GA + + +CD+LL+ + T PY+E + H
Sbjct: 348 SKSVSRLDGRSTYRGLLNVAKGATNVKATVRCDALLLDDTSKTDTYPYMEINQEDATITH 407
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EAT KI DE +FY + RG EE A++LIVNGF+ ++LPME+AVE +LI + ++ S
Sbjct: 408 EATVGKIGDEQIFYLMTRGFTEEEALSLIVNGFMEPFTKELPMEYAVELNRLIKLEMDDS 467
Query: 488 VG 489
VG
Sbjct: 468 VG 469
>gi|294786858|ref|ZP_06752112.1| FeS assembly protein SufB [Parascardovia denticolens F0305]
gi|294485691|gb|EFG33325.1| FeS assembly protein SufB [Parascardovia denticolens F0305]
Length = 499
Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats.
Identities = 200/488 (40%), Positives = 294/488 (60%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKID--VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + I +Y YG+ ++ + A KG++E ++R ISA K EP WML++RL
Sbjct: 28 EEKLKQDDDIIAQFGEYNYGWHDSDVAGEAAKKGIDEQVVRDISADKGEPQWMLDYRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y+ +L P+W + DD YY P +S D++ ++ TY++LGIP E
Sbjct: 88 YQAFLEKPMPTWG-VDLSGFHADDFKYYVKPIDKQA-KSWDELPTDIRNTYDRLGIPGAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+LKK GVIF+ A+ ++PDLVKKY +TV+
Sbjct: 146 KKRLV------SGVAAQYESEVIYNSIREDLKKQGVIFVDTDTAVRDYPDLVKKYFATVI 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN +AALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA VE++ NA ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAANVEIIVEKNARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETLSLGFAGRGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + GA S + CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVDGAKGSSSSVVCDALLVDDYSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RGI E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKVSEDQLFYLMSRGIEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|259047098|ref|ZP_05737499.1| FeS assembly protein SufB [Granulicatella adiacens ATCC 49175]
gi|259036148|gb|EEW37403.1| FeS assembly protein SufB [Granulicatella adiacens ATCC 49175]
Length = 464
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 199/476 (41%), Positives = 279/476 (58%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ V + GL+E+++R IS KNEP WML++RL + + + M +W
Sbjct: 6 ELADYKYGFHEDVTPVYETGMGLSEEVVRTISKVKNEPQWMLDFRLKSLKTFENMPMQTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + Y+ +S DDV ++ T+EK+GIP E+ LAG
Sbjct: 66 G-ADLSDIDFDAITYFKRASDKPA-RSWDDVPEKIKDTFEKIGIPEAERAYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A F+S V KEE K G+IF A+ E+P+L +KY + +VP DN AALNS
Sbjct: 120 ---AQFESEVVYHNMKEEFDKLGIIFTDTDSALKEYPELFEKYFAKLVPPTDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGV+C + L TYFRIN++ GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVKCDVPLQTYFRINDQNMGQFERTLIIVDEGASVHYVEGCTAPTYS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ + +Y+T+QNW +YN VTKR + W
Sbjct: 237 SNSLHAAIVEIFVEEGGYCRYTTIQNW-------SDNVYNLVTKRAKA-AAYGTVEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G + G SIA + Q D+G KM+H A +T+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSVFLEGPYAKGTMLSIAFAGEGQHQDTGAKMIHNAPHTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + + +S + +CD++++ + + TIP+ E N LEHEA SK
Sbjct: 349 DGGAVNYRGQVTFSKKSDYSISHIECDTIIMDDKSKSDTIPFNEIHNDKVALEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E LFY + RGI E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLFYLMSRGISESEATEMIVMGFVEPFTKELPMEYAVELNRLIAYEMEGSVG 464
>gi|227549238|ref|ZP_03979287.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium lipophiloflavum DSM 44291]
gi|227078692|gb|EEI16655.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium lipophiloflavum DSM 44291]
Length = 468
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 191/475 (40%), Positives = 279/475 (58%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y YG+ + A +GL+ D+++ IS K EP+WML RL A + P+W
Sbjct: 10 IGAYNYGWHDSDAAGAAARRGLSPDVVKDISRIKEEPEWMLNQRLKALEVFEKKPMPTWG 69
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ YY +D+ ++ TY+KLGIP E++ L
Sbjct: 70 -ADLSGIDFDNIKYYVRSTEKQATS-WEDLPEDIKNTYDKLGIPEAEKQRLV------AG 121
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ A+ EH D+ K+Y +V+P GDN ++ALNSA
Sbjct: 122 VAAQYESEVVYHQIREDLEEKGVIFVDTDTALREHEDIFKEYFGSVIPAGDNKFSALNSA 181
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 182 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYKS 241
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 242 DSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAKA-EEGATMEWVDGN 293
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ + G + GE S+A + Q D+G KM H+A +T+S IVSK ++ G
Sbjct: 294 IGSKVTMKYPAVWMTGPYAKGEVLSVAFAGEGQFQDTGAKMTHMAPHTSSSIVSKSVARG 353
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V +++ A HS + +CD+LL+ N + T PY + +N L HEA SK+
Sbjct: 354 GGRAAYRGLVQINQNAHHSTSNVECDALLVDNISRSDTYPYNDIRNDHVTLGHEAKVSKV 413
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY + RGI EE A+A+IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 414 SEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG 468
>gi|149278437|ref|ZP_01884574.1| component of SufBCD complex [Pedobacter sp. BAL39]
gi|149230807|gb|EDM36189.1| component of SufBCD complex [Pedobacter sp. BAL39]
Length = 431
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 296/436 (67%), Positives = 357/436 (81%), Gaps = 5/436 (1%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
ML+WRL A+ WL +++P W + YP I++ D+ YYAAPK SLD+VDPELL T++
Sbjct: 1 MLQWRLKAFAHWLKLEEPKWPNVTYPPINYQDIIYYAAPKKKEQLNSLDEVDPELLLTFD 60
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
KLGI + EQ+ L G VAVD V DSVS+ T+FKE+L + GVIF ISEAI +HP+LV
Sbjct: 61 KLGISLNEQKRLTG-----VAVDVVMDSVSIATSFKEQLSEIGVIFCSISEAIQKHPELV 115
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
KKYL +VVP+ DN+++ALNSAVFTDGSF YIPKGVRCPMELSTYFRIN + +GQFERTLI
Sbjct: 116 KKYLGSVVPMTDNYFSALNSAVFTDGSFCYIPKGVRCPMELSTYFRINAENSGQFERTLI 175
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA+E SYVSYLEGCTAP RDENQLHAAVVELVA+ AEIKYSTVQNWYPGD +GKGGIYN
Sbjct: 176 IAEEESYVSYLEGCTAPMRDENQLHAAVVELVAMRKAEIKYSTVQNWYPGDKEGKGGIYN 235
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG C G +KISWTQ+ETGSA+TWKYPS +L+G+ S GEFYS+A +N +QQ D+GT
Sbjct: 236 FVTKRGICAGDHAKISWTQVETGSAVTWKYPSVILKGDYSIGEFYSVAFTNNYQQADTGT 295
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+HL KNT SRIV+KGISAG S N+YRG V +GA ++RNF+QCDSLL+G+ CGAHT
Sbjct: 296 KMIHLGKNTRSRIVAKGISAGKSQNSYRGLVRAGKGALNARNFSQCDSLLLGDQCGAHTF 355
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYIE KN + +EHEATTSKI ++ LFYC QRGI E A+A+IVNGF +EV+ +LPMEFA
Sbjct: 356 PYIEVKNKTAIIEHEATTSKIGEDQLFYCKQRGIDAETAVAMIVNGFAKEVMNQLPMEFA 415
Query: 474 VEAQKLIDISLEGSVG 489
+EAQKL+ IS+EGSVG
Sbjct: 416 IEAQKLLAISMEGSVG 431
>gi|166154026|ref|YP_001654144.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 434/Bu]
gi|301335227|ref|ZP_07223471.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis L2tet1]
gi|165930014|emb|CAP03497.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
Length = 483
Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 283/477 (59%), Positives = 359/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T IQ + G++E+ I + + EP ++L++RL A+R W M++P+W
Sbjct: 9 LQQQEYPYGFVTPIQSEGLAPGISEEHIEQLVHLRGEPKFLLDFRLKAFRLWQKMEEPTW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+RYP I +DD+ Y++APK+ L+D DPE+L T++KLGIPI EQ+ L VQ V
Sbjct: 69 ARLRYPPIAYDDIVYFSAPKTKKPLGKLEDADPEILETFKKLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+ +GVIF EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGV CPME+STYFRIN+K +GQFERTLIIA++ SYVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVELVA + + I+YSTVQNWYPGD GKGGIYNFVTKRG C G SKISW+Q
Sbjct: 247 SHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+L+GE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G CGA+T P I N +EHEA TS
Sbjct: 367 AEESHNTFRSLVSISSQAVGSCNYTQCDSMLVGERCGAYTDPQIVVNNGESCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ ++ LFY RG E A++L+V+GF REV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREDQLFYLRSRGFNTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSVG 483
>gi|283782290|ref|YP_003373045.1| FeS assembly protein SufB [Pirellula staleyi DSM 6068]
gi|283440743|gb|ADB19185.1| FeS assembly protein SufB [Pirellula staleyi DSM 6068]
Length = 471
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 204/489 (41%), Positives = 283/489 (57%), Gaps = 19/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+A T D + KY F T V KA KGL+ +I+ IS KNEPDWM ++RL
Sbjct: 1 MATDLTTDTSADPIGEINKYDFRTESTAVFKARKGLDAEIVNQISDMKNEPDWMRQFRLR 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+ + P W ++DF D+YYY P G DDV E+ T++KLGIP
Sbjct: 61 SLETFFAKPMPKWGG--DVSLDFQDIYYYLKPTDHQGHT-WDDVPTEIKDTFDKLGIPEA 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ LAG V A F+S V + KE+L + GVIF A+ EHP L ++Y +TV
Sbjct: 118 EKKFLAG-------VKAQFESEVVYGSLKEDLAEKGVIFTDTDTAMKEHPKLFREYFATV 170
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P DN +AALNSAV++ GSF+YIPKGV+ + YFRIN + GQFERTLII DEG+
Sbjct: 171 IPPDDNKFAALNSAVWSGGSFIYIPKGVKIDFPMQAYFRINAERMGQFERTLIIVDEGAS 230
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP LH+AVVE++ +Y+T+QNW IYN VTKR
Sbjct: 231 VHYVEGCTAPMYSSESLHSAVVEILVKRGGRCRYTTIQNWA-------NNIYNLVTKRAM 283
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W GS +T KYP+ + + GE SIA + Q D+G K++H A
Sbjct: 284 AYAD-ATMEWVDGNLGSHLTMKYPAVYMMEPGARGEILSIAFAGAGQHQDAGAKLVHCAP 342
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTT +I+SK IS ++YRG V V +GA + + CD+L++ + + T PYIE
Sbjct: 343 NTTGQIISKSISKNGGRSSYRGLVRVEKGATNVKTNVVCDALILDDKSRSDTYPYIEIAE 402
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ HEA+ S+I +E LFY RG+ E A +IVNGF+ ++++LPME+AVE +LI
Sbjct: 403 QDVSIGHEASVSRIGEEQLFYLTSRGLTEAEASTMIVNGFIEPLVKELPMEYAVEMNRLI 462
Query: 481 DISLEGSVG 489
+ +EGSVG
Sbjct: 463 QLQMEGSVG 471
>gi|254391917|ref|ZP_05007110.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|294811960|ref|ZP_06770603.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|326440310|ref|ZP_08215044.1| hypothetical protein SclaA2_04558 [Streptomyces clavuligerus ATCC
27064]
gi|197705597|gb|EDY51409.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|294324559|gb|EFG06202.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
Length = 473
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 196/490 (40%), Positives = 294/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y++G+ +++ A +GL+E+++R ISAKKNEP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGTYEFGWADSDEAGSVAKRGLSEEVVRDISAKKNEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + PSW IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFDKKPMPSWGS-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFQEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHARGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|297161456|gb|ADI11168.1| hypothetical protein SBI_08048 [Streptomyces bingchenggensis BCW-1]
Length = 473
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 191/490 (38%), Positives = 294/490 (60%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y+YG+ ++++ A +GL+E+++R IS KK+EP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGNYEYGWADSDVAGASAKRGLSEEVVRDISGKKSEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +++ ++ TY+KLGIP
Sbjct: 60 KGLKLFEKKPMPTWGS-DLSGIDFDNIKYFVRSTEQQAAS-WEELPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ + EHP+L ++Y +
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHKIREDLEEQGVIFLDTDTGLKEHPELFQEYFGS 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S I+SK ++ G +YRG + + GA S++ CD+LL+ + T PY++ +
Sbjct: 344 PRTSSNIISKSVARGGGRTSYRGLIEIGEGAEGSKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+SD+ LFY + RG+ E+ A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSDDQLFYLMSRGLSEDEAMAMIVRGFVEPIARELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EG+VG
Sbjct: 464 IELQMEGAVG 473
>gi|24378760|ref|NP_720715.1| ABC transporter membrane protein [Streptococcus mutans UA159]
gi|290581232|ref|YP_003485624.1| hypothetical protein SmuNN2025_1706 [Streptococcus mutans NN2025]
gi|24376629|gb|AAN58021.1|AE014874_7 conserved hypothetical protein; possible ABC transporter, membrane
component [Streptococcus mutans UA159]
gi|254998131|dbj|BAH88732.1| conserved hypothetical protein [Streptococcus mutans NN2025]
Length = 471
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 203/490 (41%), Positives = 288/490 (58%), Gaps = 20/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + + ID+ Y++GF +++ + KG ++ +R IS K EP+WML++RL
Sbjct: 1 MP--ENERVEPKPIDIGDYQFGFHDDVKPIASTGKGPTKEAVREISRIKGEPEWMLDFRL 58
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M W IDFDD+ YY P +S ++V ++ T+EK+GIP
Sbjct: 59 KSLEIFYKMPMQEWGP-DLTGIDFDDIIYYQKPTDKPA-RSWEEVPEKIKDTFEKIGIPE 116
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G++F A+ E+P+L KKY +
Sbjct: 117 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPELFKKYFAK 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSA ++ G+F+Y+PKGV+ + L TYFRIN +GTGQFERTLII DEG+
Sbjct: 170 LVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEGTGQFERTLIIVDEGA 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP LHAA+VE+ ALD A ++YST+QNW +YN VTKR
Sbjct: 230 SVHYVEGCTAPTYSTASLHAAIVEIFALDGAYMRYSTIQNW-------SDNVYNLVTKRA 282
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L GE + G SIA +N Q D+G KM+H A
Sbjct: 283 KAM-TNATVEWIDGNLGAHTTMKYPSVYLDGEGARGTMLSIAFANRGQHQDTGAKMIHNA 341
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+VS ++ + S + +CD++++ + + TIP+ E
Sbjct: 342 PHTSSSIVSKSIAKGGGKVDYRGQVSFNKSSQKSVSHIECDTIIMDDISASDTIPFNEIH 401
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV ++LPME+A+E +L
Sbjct: 402 NSQVALEHEAKVSKISEEQLYYLMSRGLTESEATEMIVMGFVEPFTKELPMEYAIELNRL 461
Query: 480 IDISLEGSVG 489
I +EGSVG
Sbjct: 462 ISYEMEGSVG 471
>gi|166154901|ref|YP_001653156.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|165930889|emb|CAP06451.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 483
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 283/477 (59%), Positives = 359/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T IQ + G++E+ I + + EP ++L++RL A+R W M++P+W
Sbjct: 9 LQQQEYPYGFVTPIQSEGLAPGISEEHIEQLVHLRGEPKFLLDFRLKAFRLWQKMEEPTW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+RYP I +DD+ Y++APK+ L+D DPE+L T++KLGIPI EQ+ L VQ V
Sbjct: 69 ARLRYPPIAYDDIVYFSAPKTQKPLGKLEDADPEILETFKKLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+ +GVIF EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGV CPME+STYFRIN+K +GQFERTLIIA++ SYVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVELVA + + I+YSTVQNWYPGD GKGGIYNFVTKRG C G SKISW+Q
Sbjct: 247 SHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+L+GE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G CGA+T P I N +EHEA TS
Sbjct: 367 AEESHNTFRSLVSISSQAVGSCNYTQCDSMLVGERCGAYTDPQIVVNNGESCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ ++ LFY RG E A++L+V+GF REV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREDQLFYLRSRGFNTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSVG 483
>gi|255076591|ref|XP_002501970.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226517234|gb|ACO63228.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 431
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 276/436 (63%), Positives = 349/436 (80%), Gaps = 5/436 (1%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
MLE+RL A+R+WLTM++P W+ RYP ID+ + YY+APK + +SLD+VDPELL T++
Sbjct: 1 MLEFRLKAFRKWLTMEEPDWSDNRYPDIDYQAVSYYSAPKVMEKKKSLDEVDPELLATFD 60
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
KLGIP+ EQ+ L + VAVDAVFDSVS+ TTF+E+L K GVIF ISEAI E+P+L+
Sbjct: 61 KLGIPLSEQKRL-----TNVAVDAVFDSVSIATTFREDLAKVGVIFCSISEAIKEYPELI 115
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K++L +VVPV DN+++ALN+AVF+DGSF YIPKGV+ PMELSTYFRIN + +GQFERTLI
Sbjct: 116 KEHLGSVVPVSDNYFSALNAAVFSDGSFCYIPKGVKSPMELSTYFRINAESSGQFERTLI 175
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+A+EGSYVSYLEGCTAP DENQLHAAVVE+ A +AE+KYSTVQNWY GD GKGGIYN
Sbjct: 176 VAEEGSYVSYLEGCTAPAYDENQLHAAVVEISAAKDAEVKYSTVQNWYAGDENGKGGIYN 235
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG C+G +KISWTQ+ETGS+ITWKYPS +L+G+ S GEF+S+A++N QQ D+GT
Sbjct: 236 FVTKRGLCKGDNAKISWTQVETGSSITWKYPSVVLKGDNSVGEFFSVALTNNAQQADTGT 295
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ KNT SRIVSKGISAG S N YRG V V A +RN++QCDS+LIG+ GA+T
Sbjct: 296 KMIHVGKNTRSRIVSKGISAGKSRNCYRGLVQVQPTATGARNYSQCDSMLIGDKAGANTY 355
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYI+ + S +EHEA+TSKI ++ LFY QRGI E A+ +I++GF EV +LPMEFA
Sbjct: 356 PYIQVREPSARVEHEASTSKIGEDQLFYFQQRGIDPETAVGIIISGFCNEVFNELPMEFA 415
Query: 474 VEAQKLIDISLEGSVG 489
E +L+ + LEGSVG
Sbjct: 416 AEVNQLMSLKLEGSVG 431
>gi|260903761|ref|ZP_05912083.1| FeS assembly protein SufB [Brevibacterium linens BL2]
Length = 476
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 204/476 (42%), Positives = 289/476 (60%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ QY YG+ N + A +GL+E+++R IS K+EPDWML+ RL A + + PSW
Sbjct: 17 DLGQYAYGWHDGNDAGEFAARGLSEEVVRNISKLKDEPDWMLQRRLKALKLFEKKPMPSW 76
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
I FDD+ Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 77 G-ADLTGIHFDDIKYFVRSTEGQATS-WEDLPEDIRNTYDKLGIPEAEKQRLV------A 128
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V EEL+K GVIFM + E+P++ ++Y +++P GDN ++ALN+
Sbjct: 129 GVAAQYESEVVYHQINEELEKQGVIFMDTDTGLREYPEIFEEYFGSIIPSGDNKFSALNT 188
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGS V Y+EGCTAP
Sbjct: 189 AVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSSVHYVEGCTAPIYK 248
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+AVVE+VA +A+++Y+T+QNW +YN VTKR + + W
Sbjct: 249 TDSLHSAVVEIVAKKDAKVRYTTIQNW-------SNNVYNLVTKRAIA-EEGASMEWVDG 300
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ L GE + GE S+A + Q D+G KM+H A NT S IVSK ++
Sbjct: 301 NIGSKVTMKYPAIWLTGEHARGETLSVAFAGEGQHQDTGAKMVHAAPNTHSSIVSKSVAR 360
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G + YRG V V+ GA S N CD+LL+ N + T PYI+ + L HEAT SK
Sbjct: 361 GGGRSGYRGLVHVNPGAKGSSNNVLCDALLVDNISRSDTYPYIDIREDDVTLGHEATVSK 420
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI+I +EG VG
Sbjct: 421 VSEDQLFYLMSRGMEETEAMAMIVRGFVEPIARELPMEYALELNRLIEIQMEGGVG 476
>gi|229817693|ref|ZP_04447975.1| hypothetical protein BIFANG_02965 [Bifidobacterium angulatum DSM
20098]
gi|229785482|gb|EEP21596.1| hypothetical protein BIFANG_02965 [Bifidobacterium angulatum DSM
20098]
Length = 505
Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats.
Identities = 195/488 (39%), Positives = 287/488 (58%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + +I Y YG+ T+ + A KG++E ++R ISA K EP+WMLE RL
Sbjct: 34 EDKIKQDDEIISQFGDYTYGWHDTDAAGEAAKKGIDESVVRAISADKGEPEWMLEKRLQG 93
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ P W + D DD YY P +++ E+ TY+KLGIP E
Sbjct: 94 YRDFIAKPMPQWG-VDLKDFDADDFKYYVKPIDKQAAT-WEELPDEIRSTYDKLGIPEAE 151
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+LKK GVIF+ A+ E+P++VKKY +
Sbjct: 152 KKRLV------SGVAAQYESEVIYNSIQEDLKKQGVIFVDTDTAVREYPEIVKKYFGKCI 205
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 206 PSDDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 265
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+ VVE+ +A ++Y+TVQNW +YN VT+R
Sbjct: 266 HYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNW-------SNNVYNLVTQRAYV 318
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 319 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGQGQYQDTGAKMIHLAPH 377
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + T P+++ +
Sbjct: 378 TSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSDTYPHVDVRED 437
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 438 DVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPISRELPMEYALELNRLVE 497
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 498 LQMEGSVG 505
>gi|55981808|ref|YP_145105.1| SufB protein membrane protein [Thermus thermophilus HB8]
gi|55773221|dbj|BAD71662.1| SufB protein (membrane protein) [Thermus thermophilus HB8]
Length = 468
Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats.
Identities = 202/474 (42%), Positives = 281/474 (59%), Gaps = 17/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
++Y++ F I+ V KA KGL +I IS K EP+WML++RL A+ + P+W
Sbjct: 11 EEYRWHFIDEIRPVFKAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIFQKKPMPTWGP 70
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
++ DDL YY P + +S ++V E+ RTYE+LGIP E+++LAG V
Sbjct: 71 -DLSGLNLDDLVYYVKPAEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLAG-------V 122
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A +DS V +EEL++ GVIF+ I E + ++ DL K+Y + VVP DN +AALNSA
Sbjct: 123 GAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNSAA 182
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSFVY+P GV+ + L YFR+N GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 183 WSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTE 242
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LH V+E+V A +Y+T+QNW +YN VT+R G + W
Sbjct: 243 SLHTGVIEIVVKRGARSRYTTIQNW-------STNMYNLVTQRALVYGD-AYHEWVDGNL 294
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L + E SIA + Q D+G K++ A +T+ IVSK IS G
Sbjct: 295 GSKVTMKYPSSYLLEPGARSEILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGK 354
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+YRG V V GA H + +CD+LLI T PYIE + + ++ HEAT SKI+
Sbjct: 355 GRASYRGLVKVMEGARHGKVNVECDALLIDPESRTDTYPYIEIEEETAHVGHEATVSKIN 414
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+ E+ A ALIV GF+ + ++LP+E+AVE KLI++ +EGSVG
Sbjct: 415 DEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNKLIELEMEGSVG 468
>gi|15834681|ref|NP_296440.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum Nigg]
gi|270284848|ref|ZP_06194242.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum Nigg]
gi|270288876|ref|ZP_06195178.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum Weiss]
gi|301336227|ref|ZP_07224429.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
muridarum MopnTet14]
gi|7190094|gb|AAF38943.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 483
Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats.
Identities = 278/477 (58%), Positives = 360/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T ++ + G++E+ I + + EP ++L++RL A+R W M++P W
Sbjct: 9 LQQQEYPYGFVTPVESEGLAPGISEEHIERLVHLRGEPKFLLDFRLKAFRLWQKMEEPKW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+ Y I +D++ Y++APKS L+D DPELL T+++LGIPI EQ+ L VQ V
Sbjct: 69 ARLHYAPISYDEMVYFSAPKSKKPLGKLEDADPELLETFKRLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+++GVIF + EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEEAGVIFCSLREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGVRCPME+STYFRIN+K +GQFERTLIIA++ +YVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDAYVSYLEGCTAPAFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ-GKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVEL+A + + I+YSTVQNWYPGD G+GGIYNFVTKRG C G +SKISW+Q
Sbjct: 247 SHQLHAAVVELIANNRSTIRYSTVQNWYPGDRNTGEGGIYNFVTKRGLCAGKQSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+LRGE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILRGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G CGA+T P I N +EHEA TS
Sbjct: 367 ADESHNTFRSLVSISPQAVGSCNYTQCDSMLVGELCGAYTDPQILVHNGESCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ +E LFY RG E A++L+V+GF +EV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREEQLFYLRSRGFDTEEAVSLVVHGFCKEVIELLPLEFAREATKLLMIKLENSVG 483
>gi|306822861|ref|ZP_07456237.1| FeS assembly protein SufB [Bifidobacterium dentium ATCC 27679]
gi|309801354|ref|ZP_07695483.1| FeS assembly protein SufB [Bifidobacterium dentium JCVIHMP022]
gi|304553493|gb|EFM41404.1| FeS assembly protein SufB [Bifidobacterium dentium ATCC 27679]
gi|308222243|gb|EFO78526.1| FeS assembly protein SufB [Bifidobacterium dentium JCVIHMP022]
Length = 498
Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats.
Identities = 193/488 (39%), Positives = 286/488 (58%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + +I Y YG+ T+ + A KG++E+++R ISA KNEP+WMLE RL
Sbjct: 27 EDKIKQDDEIIQQFGDYTYGWHDTDFAGEAAKKGIDENVVRAISADKNEPEWMLEKRLEG 86
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ P W + D DD YY P + D++ E+ TY+KLGIP E
Sbjct: 87 YRDFINRPMPQWG-VDLKDFDADDFKYYVKPIDKQA-TTWDELPEEIRNTYDKLGIPEAE 144
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + ++EL GVIF+ A+ +P++V+KY +
Sbjct: 145 KSRLV------SGVAAQYESEVIYNSIQKELSDQGVIFVDTDTAVQRYPEIVRKYFGKCI 198
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 199 PSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 258
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+ VVE+ +A ++Y+TVQNW +YN VT+R
Sbjct: 259 HYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNW-------SNNVYNLVTQRAYV 311
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 312 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 370
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + T P+++ +
Sbjct: 371 TSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSDTYPHVDVRED 430
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 431 DVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPISRELPMEYALELNRLVE 490
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 491 LQMEGSVG 498
>gi|237803114|ref|YP_002888308.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis B/Jali20/OT]
gi|237805035|ref|YP_002889189.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231273335|emb|CAX10250.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274348|emb|CAX11143.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
Length = 483
Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats.
Identities = 283/477 (59%), Positives = 360/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T IQ + G++E+ I + + EP ++L++RL A+R W M++P+W
Sbjct: 9 LQQQEYPYGFVTPIQSEGLAPGISEEHIEQLVHLRGEPKFLLDFRLKAFRFWQKMEEPTW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+RYP I +DD+ Y++APK+ L+D DPE+L T++KLGIPI EQ+ L VQ V
Sbjct: 69 ARLRYPPIAYDDIVYFSAPKTKKPLGKLEDADPEILETFKKLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+ +GVIF EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGV CPME+STYFRIN+K +GQFERTLIIA++ SYVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVELVA + + I+YSTVQNWYPGD GKGGIYNFVTKRG C G SKISW+Q
Sbjct: 247 SHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+L+GE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G +CGA+T P I N +EHEA TS
Sbjct: 367 AEESHNTFRSLVSISSQAVGSCNYTQCDSMLVGEHCGAYTDPQIVVNNGESCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ ++ LFY RG E A++L+V+GF REV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREDQLFYLRSRGFNTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSVG 483
>gi|46199790|ref|YP_005457.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|46197417|gb|AAS81830.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
Length = 468
Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats.
Identities = 202/474 (42%), Positives = 281/474 (59%), Gaps = 17/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
++Y++ F I+ V KA KGL +I IS K EP+WML++RL A+ + P+W
Sbjct: 11 EEYRWHFIDEIRPVFKAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIFQKKPMPTWGP 70
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
++ DDL YY P + +S ++V E+ RTYE+LGIP E+++LAG V
Sbjct: 71 -DLSGLNLDDLVYYVKPTEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLAG-------V 122
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A +DS V +EEL++ GVIF+ I E + ++ DL K+Y + VVP DN +AALNSA
Sbjct: 123 GAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNSAA 182
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSFVY+P GV+ + L YFR+N GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 183 WSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYSTE 242
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LH V+E+V A +Y+T+QNW +YN VT+R G + W
Sbjct: 243 SLHTGVIEIVVKRGARSRYTTIQNW-------STNMYNLVTQRALVYGD-AYHEWVDGNL 294
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L + E SIA + Q D+G K++ A +T+ IVSK IS G
Sbjct: 295 GSKVTMKYPSSYLLEPGARSEILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGE 354
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+YRG V V GA H + +CD+LLI T PYIE + + ++ HEAT SKI+
Sbjct: 355 GRASYRGLVKVMEGARHGKVNVECDALLIDPESRTDTYPYIEIEEETAHVGHEATVSKIN 414
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+ E+ A ALIV GF+ + ++LP+E+AVE KLI++ +EGSVG
Sbjct: 415 DEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNKLIELEMEGSVG 468
>gi|255349075|ref|ZP_05381082.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 70]
gi|255503613|ref|ZP_05382003.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 70s]
gi|255507292|ref|ZP_05382931.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis D(s)2923]
gi|289525728|emb|CBJ15209.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435299|gb|ADH17477.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis E/150]
gi|296439017|gb|ADH21170.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis E/11023]
Length = 483
Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats.
Identities = 283/477 (59%), Positives = 361/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T IQ + G++E+ I + ++EP ++L++RL A+R W M++P+W
Sbjct: 9 LQQQEYPYGFVTPIQSEGLAPGISEEHIEHLVHLRDEPKFLLDFRLKAFRLWQKMEEPTW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+RYP I +DD+ Y++APK+ L+D DPE+L T++KLGIPI EQ+ L VQ V
Sbjct: 69 ARLRYPPISYDDIVYFSAPKTKKPLGKLEDADPEILETFKKLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+ +GVIF EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGV CPME+STYFRIN+K +GQFERTLIIA++ SYVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVELVA + + I+YSTVQNWYPGD GKGGIYNFVTKRG C G SKISW+Q
Sbjct: 247 SHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+L+GE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G +CGA+T P I N +EHEA TS
Sbjct: 367 AEESHNTFRSLVSISSQAVGSCNYTQCDSMLVGEHCGAYTDPQIVVNNGESCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ ++ LFY RG E A++L+V+GF REV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREDQLFYLRSRGFNTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSVG 483
>gi|76789424|ref|YP_328510.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis A/HAR-13]
gi|76167954|gb|AAX50962.1| ABC transporter-associated protein [Chlamydia trachomatis A/HAR-13]
Length = 483
Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 283/477 (59%), Positives = 360/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T IQ + G++E+ I + + EP ++L++RL A+R W M++P+W
Sbjct: 9 LQQQEYPYGFVTPIQSEGLAPGISEEHIEQLVHLRGEPKFLLDFRLKAFRFWQKMEEPTW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+RYP I +DD+ Y++APK+ L+D DPE+L T++KLGIPI EQ+ L VQ V
Sbjct: 69 ARLRYPPIAYDDIVYFSAPKTKKPLGKLEDADPEILETFKKLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+ +GVIF EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGV CPME+STYFRIN+K +GQFERTLIIA++ SYVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVELVA + + I+YSTVQNWYPGD GKGGIYNFVTKRG C G SKISW+Q
Sbjct: 247 SHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+L+GE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G +CGA+T P I N +EHEA TS
Sbjct: 367 AEESHNTFRSLVSISSQAVGSCNYTQCDSMLVGEHCGAYTDPQIVVNNGKSCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ ++ LFY RG E A++L+V+GF REV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREDQLFYLRSRGFNTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSVG 483
>gi|183601553|ref|ZP_02962923.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|241190948|ref|YP_002968342.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196354|ref|YP_002969909.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|183219159|gb|EDT89800.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249340|gb|ACS46280.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240250908|gb|ACS47847.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289178690|gb|ADC85936.1| SufB [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793937|gb|ADG33472.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis V9]
Length = 498
Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 193/486 (39%), Positives = 289/486 (59%), Gaps = 19/486 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
R+ + + + +Y YG+ + + A KG++E+++R ISA K+EP+WML+ RL YR
Sbjct: 31 RQDDEIIEQF--GEYGYGWHDSDAAGEAAKKGIDENVVREISADKHEPEWMLDMRLRGYR 88
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
++ P W + D YY P +D+ ++ TY++LGIP E+
Sbjct: 89 AFIEQPMPKWG-VDLSGFHAQDFKYYVKPVGKQAAS-WEDLPEDIRTTYDRLGIPEAEKS 146
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S + + +++L K GVIF+ A+ E+P+LV+KY TVVP
Sbjct: 147 RLV------SGVAAQYESEVIYNSIQDDLSKQGVIFVDTDTAVREYPELVQKYFGTVVPP 200
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV Y
Sbjct: 201 EDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYVHY 260
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP + LHAA+VE++ NA ++Y+TVQNW +YN VT+R R
Sbjct: 261 VEGCTAPIYSTDSLHAAIVEIIVEKNARVRYTTVQNW-------SNNVYNLVTQRAYVR- 312
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + W GS T KYP+C+L + S+ + Q D+G KM+HLA +T+
Sbjct: 313 EGATMEWVDGNIGSKATMKYPACILAEPYASASTMSLGFAGKGQYQDTGAKMIHLAPHTS 372
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IV+K IS G + YRG V + GA S + CD+LL+ + + T P+++ +
Sbjct: 373 STIVAKSISRGGGRSAYRGLVKIVDGAEGSSSNVVCDALLVDDFSRSDTYPHVDVREDDV 432
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEAT SK+S++ LFY + RGI E+ A+A+IV GFV + ++LPME+A+E +L+++
Sbjct: 433 SMAHEATVSKVSEDQLFYLMSRGIEEKEAMAMIVRGFVEPISRELPMEYALELNRLVELQ 492
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 493 MEGSVG 498
>gi|255311513|ref|ZP_05354083.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 6276]
gi|255317814|ref|ZP_05359060.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis 6276s]
Length = 483
Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 283/477 (59%), Positives = 360/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T IQ + G++E+ I + + EP ++L++RL A+R W M++P+W
Sbjct: 9 LQQQEYPYGFVTPIQSEGLAPGISEEHIEHLVHLRGEPKFLLDFRLKAFRLWQKMEEPTW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+RYP I +DD+ Y++APK+ L+D DPE+L T++KLGIPI EQ+ L VQ V
Sbjct: 69 ARLRYPPIAYDDIVYFSAPKTKKPLGKLEDADPEILETFKKLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+ +GVIF EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGV CPME+STYFRIN+K +GQFERTLIIA++ SYVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVELVA + + I+YSTVQNWYPGD GKGGIYNFVTKRG C G SKISW+Q
Sbjct: 247 SHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+L+GE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G +CGA+T P I N +EHEA TS
Sbjct: 367 AEESHNTFRSLVSISSQAVGSCNYTQCDSMLVGEHCGAYTDPQIVVNNGESCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ ++ LFY RG E A++L+V+GF REV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREDQLFYLRSRGFNTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSVG 483
>gi|297583459|ref|YP_003699239.1| FeS assembly protein SufB [Bacillus selenitireducens MLS10]
gi|297141916|gb|ADH98673.1| FeS assembly protein SufB [Bacillus selenitireducens MLS10]
Length = 465
Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 288/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF ++ + ++ KGL DI+R IS K+EP WML++RL + + P W
Sbjct: 7 EISEYQYGFSDKDVSIFRSKKGLTSDIVREISQMKDEPQWMLDFRLKSLETFYKKPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFD+++YY P +S D+V E+ T++KLGIP EQ+ LAG
Sbjct: 67 GG-NLNELDFDEIFYYVKPSEKSE-RSWDEVPEEIKNTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V +++L+ GVIF A+ E ++ +KY TV+P DN +AALNS
Sbjct: 119 -VSAQYESEVVYHNMQQDLEDLGVIFKDTDTALKEDEEIFRKYFGTVIPPTDNKFAALNS 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADE S V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGVKTETPLQAYFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ NA +Y+T+QNW P ++N VTKR + + + W
Sbjct: 238 TNSLHSAVVEIIVEKNAYCRYTTIQNWAP-------NVFNLVTKRAVAQ-ENAVMEWVDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ +++G + G SIAI+ Q D+G KM HLA + +S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVVMKGRGARGNVLSIAIAGKGQHQDAGAKMHHLAPDCSSSIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V R A S + +CD+L++ N + TIPY E N+ L+HEAT SK
Sbjct: 350 QGGKVTYRGIVHFGRKAERSMSNIECDTLIMDNESTSDTIPYNEILNNDITLQHEATVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RGI E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGISEQEATEMIVMGFIEPFTKELPMEYAVEMNRLISFEMEGSIG 465
>gi|307128678|ref|YP_003880708.1| FeS assembly protein SufB [Candidatus Sulcia muelleri CARI]
gi|306483140|gb|ADM90010.1| FeS assembly protein SufB [Candidatus Sulcia muelleri CARI]
Length = 481
Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats.
Identities = 300/489 (61%), Positives = 377/489 (77%), Gaps = 8/489 (1%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M+ ++ + + I+ YKYGF TNI+ DK PKG+NE+II IS KKNEPDWML+ RL
Sbjct: 1 MIKKKKEFNIIDNIENSYYKYGFYTNIESDKIPKGINENIITHISRKKNEPDWMLKRRLK 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+Y+ W M P W Y DF ++ YY+A K + ++D +LL T+ KL + ++
Sbjct: 61 SYKIWKKMIHPKWGNFSYKIPDFKNISYYSAIKKNKFLK--KEIDNKLLDTFNKLNLKLK 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
+ + SK+A+D + DSVSV TTFK+ L + G+IF PIS+AI ++PDL+KKY+ +
Sbjct: 119 KNKK-----LSKIALDVIMDSVSVTTTFKKVLSEKGIIFCPISKAIKKYPDLIKKYIGKI 173
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP+ DNFY+ALNSAVF+DGSF YIPK VRCP+ELSTYFRINE G GQFERTL+IAD+ SY
Sbjct: 174 VPIKDNFYSALNSAVFSDGSFCYIPKNVRCPVELSTYFRINESGIGQFERTLVIADKNSY 233
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
VSYLEGCTAPQR+ENQLHAAVVEL+AL+ AEIKYSTVQNWYPGD G GG++NFVTKRG
Sbjct: 234 VSYLEGCTAPQREENQLHAAVVELIALEGAEIKYSTVQNWYPGDKNGIGGVFNFVTKRGL 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +SKISWTQ+ETGSAITWKYPSC+L+G+ S GEFYS+A + FQQ D+GTKM+HL K
Sbjct: 294 C-EKKSKISWTQIETGSAITWKYPSCILKGDDSIGEFYSVAFTKNFQQSDTGTKMIHLGK 352
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT S I+SKGISAGFS N+YRG V++ A +SRNF+QCDSLLIGN C AHT P+I KN
Sbjct: 353 NTKSTIISKGISAGFSKNSYRGLVNISSNAINSRNFSQCDSLLIGNTCSAHTFPFINVKN 412
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+S +EHEATTSKI ++ +FYC QRGI E AI+LIV GF + +L +LPMEFA+EA+KL+
Sbjct: 413 NSSKVEHEATTSKIEEDQIFYCNQRGINLEKAISLIVTGFSKNILDRLPMEFAIEARKLL 472
Query: 481 DISLEGSVG 489
+I LEGSVG
Sbjct: 473 EIKLEGSVG 481
>gi|15605417|ref|NP_220203.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis D/UW-3/CX]
gi|3329137|gb|AAC68279.1| ABC Transporter [Chlamydia trachomatis D/UW-3/CX]
gi|296436228|gb|ADH18402.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/9768]
gi|296437157|gb|ADH19327.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/11222]
gi|296438088|gb|ADH20249.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/11074]
gi|297140589|gb|ADH97347.1| cysteine desulfurase activator complex subunit SufB [Chlamydia
trachomatis G/9301]
gi|297748815|gb|ADI51361.1| SufB [Chlamydia trachomatis D-EC]
gi|297749695|gb|ADI52373.1| SufB [Chlamydia trachomatis D-LC]
Length = 483
Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats.
Identities = 282/477 (59%), Positives = 360/477 (75%), Gaps = 3/477 (0%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +Y YGF T IQ + G++++ I + + EP ++L++RL A+R W M++P+W
Sbjct: 9 LQQQEYPYGFVTPIQSEGLAPGISQEHIEQLVHLRGEPKFLLDFRLKAFRFWQKMEEPTW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
AR+RYP I +DD+ Y++APK+ L+D DPE+L T++KLGIPI EQ+ L VQ V
Sbjct: 69 ARLRYPPIAYDDIVYFSAPKTKKPLGKLEDADPEILETFKKLGIPIDEQKRLLNVQ--DV 126
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A+D VFDSVS+ TTFK+ L+ +GVIF EAI +PDLVK+YL +VVP DNF+AALNS
Sbjct: 127 AMDLVFDSVSIGTTFKKTLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNS 186
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+DGSFVYIPKGV CPME+STYFRIN+K +GQFERTLIIA++ SYVSYLEGCTAP
Sbjct: 187 AVFSDGSFVYIPKGVCCPMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFS 246
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+QLHAAVVELVA + + I+YSTVQNWYPGD GKGGIYNFVTKRG C G SKISW+Q
Sbjct: 247 SHQLHAAVVELVAHNRSVIRYSTVQNWYPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQ 306
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E G+AITWKYPSC+L+GE S GEFYSIA++NG Q D+GTKMLH+ K ++S IVSKGIS
Sbjct: 307 VEVGAAITWKYPSCILKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGIS 366
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A S+NT+R VS+ A S N+TQCDS+L+G +CGA+T P I N +EHEA TS
Sbjct: 367 AEESHNTFRSLVSISSQAVGSCNYTQCDSMLVGEHCGAYTDPQIVVNNGESCVEHEAATS 426
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
K+ ++ LFY RG E A++L+V+GF REV++ LP+EFA EA KL+ I LE SVG
Sbjct: 427 KLREDQLFYLRSRGFNTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSVG 483
>gi|311064205|ref|YP_003970930.1| FeS assembly protein SufB [Bifidobacterium bifidum PRL2010]
gi|310866524|gb|ADP35893.1| sufB FeS assembly protein SufB [Bifidobacterium bifidum PRL2010]
Length = 499
Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 195/488 (39%), Positives = 287/488 (58%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + K +I Y YG+ + + A +G++E ++R ISA K EP WML+ RL
Sbjct: 28 EEKLKKDDEIIQQFGDYTYGWHDSDAAGEAAKRGIDEQVVRDISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P ++ +++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIDKQA-KTWEELPDDIRSTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + ++EL GVIF+ A+ E+PDLVKKY TVV
Sbjct: 146 KSRLV------SGVAAQYESEVIYNSIQKELADQGVIFVDTDTAVREYPDLVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 SPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVTMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|323488650|ref|ZP_08093892.1| FeS assembly protein SufB [Planococcus donghaensis MPA1U2]
gi|323397668|gb|EGA90472.1| FeS assembly protein SufB [Planococcus donghaensis MPA1U2]
Length = 465
Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 203/476 (42%), Positives = 290/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ YKYGF ++ V ++ +GL EDI+R IS K EP+WML+ RL A + + +M P W
Sbjct: 7 EIGDYKYGFHDKDVSVFRSKRGLTEDIVREISKIKEEPEWMLKSRLKALKLFYSMPMPQW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+++FD++ YY P D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 67 GG-DLASLNFDEITYYVKPSEASQTS-WDEVPEEIKRTFDKLGIPEAEQKYLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A ++S V K+EL+ G++F A+ E+ DL K++ +V+P DN +AALN+
Sbjct: 119 -VSAQYESEVVYHNMKQELEDMGIVFKDTGAALNENEDLFKEHWQSVIPAADNKFAALNT 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKG++ L YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 178 AVWSGGSFIYVPKGIKVESPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYT 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ +A +Y+T+QNW ++N VTKR + W
Sbjct: 238 TNSLHSAVVEIIVKKDAYCRYTTIQNWA-------NNVFNLVTKRAFVY-ENGTMEWIDG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ L+GE + G SIAI+ Q D+G KM+HLA NT+S IVSK IS
Sbjct: 290 NIGSKLTMKYPAVYLKGEGARGMTLSIAIAGKGQHQDAGAKMIHLAPNTSSSIVSKSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+YRG V R A +R+ +CD+L++ N + TIPY E N + +LEHEA SK
Sbjct: 350 QGGKVSYRGIVHFGRKADGARSNIECDTLIMDNQSTSDTIPYNEILNDNVSLEHEAKVSK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+S+E LFY + RG+ E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 410 VSEEQLFYLMSRGVSEQEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 465
>gi|224282921|ref|ZP_03646243.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium bifidum NCIMB 41171]
gi|310287364|ref|YP_003938622.1| FeS assembly protein SufB [Bifidobacterium bifidum S17]
gi|313140080|ref|ZP_07802273.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
gi|309251300|gb|ADO53048.1| FeS assembly protein SufB [Bifidobacterium bifidum S17]
gi|313132590|gb|EFR50207.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
Length = 499
Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 194/488 (39%), Positives = 287/488 (58%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + K +I Y YG+ + + A +G++E ++R ISA K EP WML+ RL
Sbjct: 28 EEKLKKDDEIIQQFGDYTYGWHDSDAAGEAAKRGIDEQVVRDISADKGEPQWMLDMRLRG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ +L P W + + DD YY P ++ +++ ++ TY++LGIP E
Sbjct: 88 FKAFLEKPMPDWG-VDLSGFNADDFKYYVKPIDKQA-KTWEELPDDIRSTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +++L GVIF+ A+ E+PDLVKKY TVV
Sbjct: 146 KSRLV------SGVAAQYESEVIYNSIQKDLADQGVIFVDTDTAVREYPDLVKKYFGTVV 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DN + ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 SPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP E+ LHAA+VE++ +A ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S+ + Q D+G KM+HLA +
Sbjct: 313 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLGFAGKGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + GA S N T CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSSNSTVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVTMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|297571504|ref|YP_003697278.1| FeS assembly protein SufB [Arcanobacterium haemolyticum DSM 20595]
gi|296931851|gb|ADH92659.1| FeS assembly protein SufB [Arcanobacterium haemolyticum DSM 20595]
Length = 480
Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 198/486 (40%), Positives = 293/486 (60%), Gaps = 21/486 (4%)
Query: 5 RETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
ET++ + Y+YG+ T+ A +GLNED++R IS +K EP+WML+ RL + +
Sbjct: 15 EETIEAI----GGSYQYGWHDTDTAGASAKRGLNEDVVRDISERKGEPEWMLKKRLKSLK 70
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W IDFD + YY +D+ ++ TY++LGIP E+
Sbjct: 71 LFERRPMPTWG-ADLGKIDFDSIKYYVKSTEGQATS-WEDLPEDIKNTYDRLGIPEAEKA 128
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V +E+L++ GVIF+ + EHP++ ++Y T +P+
Sbjct: 129 RLV------AGVAAQYESEVVYHKIREDLEEQGVIFLDTDTGLREHPEIFQEYFGTAIPL 182
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN +A+LNSAV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGSYV Y
Sbjct: 183 GDNKFASLNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHY 242
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP + LH+AVVE+ NA ++Y+T+QNW ++N VTKR
Sbjct: 243 VEGCTAPIYSSDSLHSAVVEIFVKKNARVRYTTIQNW-------SNNVFNLVTKRAMV-E 294
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ W GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A NT+
Sbjct: 295 EGGTMEWIDGNIGSKVTMKYPAVYLTGEHARGETLSIAFAGEGQYQDTGSKMVHMAPNTS 354
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S IVSK ++ G + YRG V + A +S++ CD+LL+ + + T PY++ +
Sbjct: 355 SSIVSKSVARGGGRSAYRGLVQIEENAHNSKSNVLCDALLVDSISRSDTYPYVDVRVDDV 414
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+ HEAT SK+S++ LFY + RGI E A+A+IV GFV + ++LPME+A+E +LI++
Sbjct: 415 EMGHEATVSKVSEDQLFYLMSRGIEETDAMAMIVRGFVEPIARELPMEYALELNRLIELQ 474
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 475 MEGSVG 480
>gi|158425239|ref|YP_001526531.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158332128|dbj|BAF89613.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 460
Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 332/432 (76%), Positives = 382/432 (88%), Gaps = 4/432 (0%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ETV++VR IDVDQYKYGF T+I+ +KAPKGLNED +R+ISAKKNEP+WMLEWRL
Sbjct: 1 MPAVQETVERVRSIDVDQYKYGFVTDIESEKAPKGLNEDTVRYISAKKNEPEWMLEWRLD 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A+RRWLTM++P+WAR+ YP IDF D YYYA PK+ P+SLD++DPE+L TY+KLGIP+R
Sbjct: 61 AFRRWLTMEEPTWARVSYPKIDFQDYYYYAQPKAK--PKSLDEIDPEILATYDKLGIPLR 118
Query: 121 EQEILAGVQ--TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+E L G++ + +AVDAVFDSVSV TTFK EL K+GVIF ISEAI EHPDLVK+YL
Sbjct: 119 EREALLGIESGSRPIAVDAVFDSVSVATTFKAELAKAGVIFCSISEAIREHPDLVKQYLG 178
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+VVPV DNFYA LN+AVF+DGSFVY+PKGVRCPMELSTYFRINE+ TGQFERTLIIADEG
Sbjct: 179 SVVPVSDNFYATLNTAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEG 238
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+YVSYLEGCTAPQRDENQLHAAVVELVAL +AEIKYSTVQNWYPGD GKGGIYNFVTKR
Sbjct: 239 AYVSYLEGCTAPQRDENQLHAAVVELVALKDAEIKYSTVQNWYPGDKDGKGGIYNFVTKR 298
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
GDCRG SKISWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIAISNGFQQ+DSGTKM+HL
Sbjct: 299 GDCRGDNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGFQQVDSGTKMIHL 358
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT+SRI+SKGI+AG S NTYRG+V+ HR A +RNFT CDSLLIG+ CGAHT+PYIE+
Sbjct: 359 GKNTSSRIISKGIAAGRSENTYRGQVTAHRRATGARNFTNCDSLLIGDKCGAHTVPYIEA 418
Query: 419 KNSSCNLEHEAT 430
KN+S EHEAT
Sbjct: 419 KNASAVFEHEAT 430
>gi|28493304|ref|NP_787465.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
gi|28572585|ref|NP_789365.1| hypothetical protein TW434 [Tropheryma whipplei TW08/27]
gi|28410717|emb|CAD67103.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
gi|28476345|gb|AAO44434.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
Length = 473
Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 282/475 (59%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y+YG+ + A +GL+ D++ IS K EPDWM RL A + P+W
Sbjct: 15 LGKYEYGWHDSDRAGSDARRGLSRDVVEEISETKGEPDWMRSMRLRALEIFYRKPMPNWG 74
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD + Y+ S +D+ E+ TYE+LGIP E++ L
Sbjct: 75 -ADLTGIDFDQIKYFVRSTERQA-NSWEDLPEEIRNTYERLGIPDAERQRLV------AG 126
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V EL++ GV+F+ A+ EHPD+++KY +V+P GDN +AALN+A
Sbjct: 127 VAAQYESEVVYHQINAELERQGVVFLDTDTALKEHPDILRKYFGSVIPAGDNKFAALNTA 186
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+P+GV+ + L YFRIN + GQFERTLIIAD+ SYV Y+EGCTAP
Sbjct: 187 VWSGGSFVYVPEGVKVEIPLQAYFRINTENMGQFERTLIIADKNSYVHYVEGCTAPIYSS 246
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ + A ++Y+TVQNW +YN VTKR S + W
Sbjct: 247 HSLHSAVVEILVKEGARVRYTTVQNW-------STNVYNLVTKRAYVS-KNSTMEWIDGN 298
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYPS L E + GE S+A + Q D+G K +H+A T S IVSK I+ G
Sbjct: 299 IGSKVTMKYPSVYLADEGAKGEILSVAFAGPGQYQDAGAKAIHIAPRTKSAIVSKSIARG 358
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG+V V GA S N +CD+LL+ + T P I+ + L HEAT SK+
Sbjct: 359 GGRTAYRGEVRVEEGAKDSANSVRCDALLVDTISRSDTYPAIDIRRDDAQLAHEATVSKV 418
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+++ LFY + RG+ E ++A+IV GF+ ++++LPME+A+E KLI++S+EG+VG
Sbjct: 419 NEDQLFYLMSRGLEEAESVAMIVRGFIDPIVRELPMEYAMELNKLIEMSMEGAVG 473
>gi|225351936|ref|ZP_03742959.1| hypothetical protein BIFPSEUDO_03540 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157183|gb|EEG70522.1| hypothetical protein BIFPSEUDO_03540 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 498
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 192/488 (39%), Positives = 288/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + +I Y YG+ T+ + A KG++E+++R ISA KNEP+WMLE RL
Sbjct: 27 EDKIKQDDEIIQQFGDYTYGWHDTDFAGEAAKKGIDENVVRAISADKNEPEWMLEKRLEG 86
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ P W + D DD YY P + +++ E+ TY+KLGIP E
Sbjct: 87 YRDFINRPMPQWG-VDLKDFDADDFKYYVKPIDKQA-TTWEELPDEIRATYDKLGIPEAE 144
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L + A ++S + + +++L+ GVIF+ A+ ++P++VKKY +
Sbjct: 145 KSRLV------SGIAAQYESEVIYNSIQKDLEDQGVIFVDTDTAVQKYPEIVKKYFGKCI 198
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 199 PSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 258
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+ VVE+ +A ++Y+TVQNW +YN VT+R
Sbjct: 259 HYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNW-------SNNVYNLVTQRAYV 311
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 312 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 370
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + T P+++ +
Sbjct: 371 TSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSDTYPHVDVRED 430
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ EE A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 431 DVSMAHEATVSKVSEDQLFYLMSRGLSEEEAMGMIVRGFVEPISRELPMEYALELNRLVE 490
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 491 LQMEGSVG 498
>gi|171743056|ref|ZP_02918863.1| hypothetical protein BIFDEN_02182 [Bifidobacterium dentium ATCC
27678]
gi|283455933|ref|YP_003360497.1| FeS assembly protein SufB [Bifidobacterium dentium Bd1]
gi|171278670|gb|EDT46331.1| hypothetical protein BIFDEN_02182 [Bifidobacterium dentium ATCC
27678]
gi|283102567|gb|ADB09673.1| FeS assembly protein SufB [Bifidobacterium dentium Bd1]
Length = 498
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 193/488 (39%), Positives = 286/488 (58%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + +I Y YG+ T+ + A KG++E+++R ISA KNEP+WMLE RL
Sbjct: 27 EDKIKQDDEIIQQFGDYTYGWHDTDFAGEAAKKGIDENVVRAISADKNEPEWMLEKRLEG 86
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ P W + D DD YY P + D++ E+ TY+KLGIP E
Sbjct: 87 YRDFINRPMPQWG-VDLKDCDADDFKYYVKPIDKQA-TTWDELPEEIRSTYDKLGIPEAE 144
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + ++EL GVIF+ A+ +P++V+KY +
Sbjct: 145 KSRLV------SGVAAQYESEVIYNSIQKELSDQGVIFVDTDTAVQRYPEIVRKYFGKCI 198
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 199 PSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 258
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+ VVE+ +A ++Y+TVQNW +YN VT+R
Sbjct: 259 HYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNW-------SNNVYNLVTQRAYV 311
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 312 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 370
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + T P+++ +
Sbjct: 371 TSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSDTYPHVDVRED 430
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 431 DVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPISRELPMEYALELNRLVE 490
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 491 LQMEGSVG 498
>gi|212716049|ref|ZP_03324177.1| hypothetical protein BIFCAT_00962 [Bifidobacterium catenulatum DSM
16992]
gi|212661416|gb|EEB21991.1| hypothetical protein BIFCAT_00962 [Bifidobacterium catenulatum DSM
16992]
Length = 498
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 191/488 (39%), Positives = 288/488 (59%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKIDVD--QYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + +I Y YG+ T+ + A KG++E+++R ISA KNEP+WMLE RL
Sbjct: 27 EDKIKQDDEIIQQFGDYTYGWHDTDFAGEAAKKGIDENVVRAISADKNEPEWMLEKRLEG 86
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ P W + D DD YY P + +++ E+ TY+KLGIP E
Sbjct: 87 YRDFINRPMPQWG-VDLKDFDADDFKYYVKPIDKQA-TTWEELPDEIRATYDKLGIPEAE 144
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L + A ++S + + +++L+ GVIF+ A+ ++P++VKKY +
Sbjct: 145 KSRLV------SGIAAQYESEVIYNSIQKDLEDQGVIFVDTDTAVQKYPEIVKKYFGKCI 198
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 199 PSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 258
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+ VVE+ +A ++Y+TVQNW +YN VT+R
Sbjct: 259 HYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNW-------SNNVYNLVTQRAYV 311
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 312 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 370
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + T P+++ +
Sbjct: 371 TSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSDTYPHVDVRED 430
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 431 DVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPISRELPMEYALELNRLVE 490
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 491 LQMEGSVG 498
>gi|323360095|ref|YP_004226491.1| ABC transporter [Microbacterium testaceum StLB037]
gi|323276466|dbj|BAJ76611.1| ABC-type transport system [Microbacterium testaceum StLB037]
Length = 472
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 207/483 (42%), Positives = 293/483 (60%), Gaps = 17/483 (3%)
Query: 8 VDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+D+ + QY++G+ T+ A +G+NED++R ISA K+EP+WML+ RL Y+ +
Sbjct: 6 IDRPELESLGQYEFGWHDTDAAGAVAQRGINEDVVRGISALKSEPEWMLKTRLKGYQLFG 65
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+W IDFD++ Y+ +++ E+ TYEKLGIP E++ L
Sbjct: 66 RKPMPTWG-ADLSDIDFDNIKYFVRSTEKQAGS-WEELPEEIRNTYEKLGIPEAERQRLV 123
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
V A ++S V +E+L++ GVIFM A+ EHP+ ++Y TV+P GDN
Sbjct: 124 ------AGVAAQYESEVVYHQIREDLEQQGVIFMDTDTALKEHPEFFEEYFGTVIPAGDN 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADE SYV Y+EG
Sbjct: 178 KFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEDSYVHYIEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR +
Sbjct: 238 CTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKRAVAH-EGA 289
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYPS L GE + GE S+A + Q D+G KM+H+A T S I
Sbjct: 290 TMEWVDGNIGSKVTMKYPSIYLMGEHAKGETLSVAFAGPGQHQDAGAKMIHMAPYTQSSI 349
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSK I+ G YRG+V V A HS N +CD+LL+ + T P I+ + L
Sbjct: 350 VSKSIARGGGRAGYRGEVRVDANAHHSANTVRCDALLVDTISRSDTYPAIDIRVDDVQLG 409
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEAT SK+S+E LFY RG+PE+ A+A+IV GF+ + ++LPME+A+E KLI++ +EG
Sbjct: 410 HEATVSKVSEEQLFYLQSRGLPEDEAMAMIVRGFIEPIARELPMEYALELNKLIEMGMEG 469
Query: 487 SVG 489
SVG
Sbjct: 470 SVG 472
>gi|294790817|ref|ZP_06755975.1| FeS assembly protein SufB [Scardovia inopinata F0304]
gi|294458714|gb|EFG27067.1| FeS assembly protein SufB [Scardovia inopinata F0304]
Length = 499
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 197/488 (40%), Positives = 293/488 (60%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKID--VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E + + +I Y YG+ + A KG++E ++R ISA K+EPDWML++RL
Sbjct: 28 EEKLKQDDEIIAQFGDYTYGWHDSDAAGQAAKKGIDEQVVRDISADKSEPDWMLDFRLQG 87
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y+ +L P W + + DD YY P S D++ ++ TY++LGIP E
Sbjct: 88 YQAFLDKPMPKWG-VDLSGFNADDFKYYVKPIDKP-VNSWDELPTDIRTTYDRLGIPEAE 145
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+LKK GVIF+ A+ ++PDLV+KY +TV+
Sbjct: 146 KKRLV------SGVAAQYESEVIYNSIREDLKKQGVIFVDTDAAVRDYPDLVRKYFATVI 199
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN +AALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 200 PPDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPAMGQFERTLIIADEGSYV 259
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP ++ LHAA VE++ NA ++Y+TVQNW +YN VT+R
Sbjct: 260 HYVEGCTAPVYSQDSLHAANVEIIVEKNARVRYTTVQNW-------SNNVYNLVTQRAYV 312
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS T KYP+C+L + E S+ + Q D+G KM+HLA +
Sbjct: 313 K-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETLSLGFAGRGQYQDTGAKMIHLAPH 371
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + GA S + CD+LL+ + + T P+++ +
Sbjct: 372 TSSTIVAKSISRGGGRSAYRGLVKIIDGAYGSSSNVVCDALLVDDFSRSDTYPHVDVRED 431
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 432 DVSMAHEATVSKVSEDQLFYLMSRGVEEKEAMGMIVRGFVEPISRELPMEYALELNRLVE 491
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 492 LQMEGSVG 499
>gi|163789746|ref|ZP_02184183.1| hypothetical protein CAT7_05926 [Carnobacterium sp. AT7]
gi|159874968|gb|EDP69035.1| hypothetical protein CAT7_05926 [Carnobacterium sp. AT7]
Length = 464
Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats.
Identities = 195/476 (40%), Positives = 284/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ + Y++GF +++ KGL E +R IS +K EP WML++RL AY + P W
Sbjct: 6 ERENYQFGFHDDVESIYTTGKGLTEATVREISKRKQEPTWMLDYRLRAYDHFTKRTMPKW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD++ YY S +S +DV ++ T+E++GIP E++ LAG
Sbjct: 66 G-ADLSEIDFDNITYY-KTVSNQPERSWEDVPDKIKETFERIGIPEAERKYLAGA----- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G++F A+ E+P++ K++ TVVP DN AALNS
Sbjct: 119 --GAQYESEVVYHNMKEEFEKMGIVFTDTDTALKEYPEIFKEHFGTVVPATDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVRC + L YFRIN++ GQFERTLI+ DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVRCDVPLQMYFRINDEAMGQFERTLIVVDEGASVHYVEGCTAPTFS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LHAA+VE+V +A +Y+T+QNW +YN VTKR + + W
Sbjct: 237 SSSLHAAIVEIVVKKDAYCRYTTIQNW-------SNNVYNLVTKRAVA-EEGATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G + G SIA++ Q D+G KM+H A NT+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSIQLNGRGARGTMLSIAMAGAGQNQDTGAKMIHNAPNTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + + S + +CD++++ + + TIP+ E N + +LEHEA SK
Sbjct: 349 DGGEVNYRGQVTFGKNSGGSISHIECDTIIMDDLSKSDTIPFNEIHNGNVSLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E+ A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLYYLMSRGLTEQEATEMIVMGFVEPFSKELPMEYAVELNRLIAYEMEGSVG 464
>gi|315639985|ref|ZP_07895112.1| FeS assembly protein SufB [Enterococcus italicus DSM 15952]
gi|315484247|gb|EFU74716.1| FeS assembly protein SufB [Enterococcus italicus DSM 15952]
Length = 463
Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 282/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YKYGF ++Q V KGL E I+R IS K EP+WML++RL + + +W
Sbjct: 5 ELEEYKYGFHDDVQPVFSTGKGLTEKIVREISKVKGEPEWMLDFRLKSLEVFNKTPMQTW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY + DDV ++ T+EK+GIP E+ LAG
Sbjct: 65 GP-DLSDIDFDAIKYYQKSSDKPA-RDWDDVPEKIKDTFEKIGIPEAERAYLAGAS---- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 119 ---AQYESEVVYHNMKEEFEKLGIVFTDTDSALKEYPELFKQYFSKLVPPTDNKLAALNS 175
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 176 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 235
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ L +A +Y+T+QNW +YN VTKR + + W
Sbjct: 236 TNSLHAAIVEIFTLKDAYCRYTTIQNW-------SDNVYNLVTKRARA-EQGATVEWIDG 287
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L GE + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 288 NLGAKTTMKYPSVYLEGEGARGTMLSIAFAGANQVQDTGAKMIHNAPNTSSSIVSKSISK 347
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 348 DGGEVNYRGQVTFGKKSAGSMSHIECDTIIMDELSKSDTIPFNEIHNSQVSLEHEAKVSK 407
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 408 ISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 463
>gi|257876356|ref|ZP_05656009.1| FeS assembly protein SufB [Enterococcus casseliflavus EC20]
gi|257810522|gb|EEV39342.1| FeS assembly protein SufB [Enterococcus casseliflavus EC20]
Length = 466
Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 286/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF ++Q V +GL EDI+R IS K EP+WMLE+RL + + M +W
Sbjct: 8 ELEEYKFGFHDDVQPVFSTGEGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNW 67
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY P + DDV ++ T+E++GIP E+ LAG
Sbjct: 68 GP-DLSDIDFDAIKYYQKPSDRPA-RDWDDVPEKIKETFERIGIPEAERAYLAGAS---- 121
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 122 ---AQYESEVVYHNMKEEFEKLGIVFTDTDSALKEYPELFKQYFSKLVPPTDNKLAALNS 178
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 179 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 238
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ L +A +Y+T+QNW +YN VTKR + + W
Sbjct: 239 SNSLHAAIVEIFTLKDAYCRYTTIQNW-------SDNVYNLVTKRAKAL-EGATVEWIDG 290
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 291 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 350
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + + TIP+ E NS +LEHEA SK
Sbjct: 351 DGGAVNYRGQVTFGKKSAGSISHIECDTIIMDDLSKSDTIPFNEIHNSQVSLEHEAKVSK 410
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 411 ISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 466
>gi|329942369|ref|ZP_08291179.1| feS assembly protein SufB [Chlamydophila psittaci Cal10]
gi|332287011|ref|YP_004421912.1| FeS assembly protein SufB [Chlamydophila psittaci 6BC]
gi|313847607|emb|CBY16595.1| putative ABC transporter [Chlamydophila psittaci RD1]
gi|325507249|gb|ADZ18887.1| FeS assembly protein SufB [Chlamydophila psittaci 6BC]
gi|328815279|gb|EGF85267.1| feS assembly protein SufB [Chlamydophila psittaci Cal10]
gi|328914241|gb|AEB55074.1| FeS assembly protein SufB [Chlamydophila psittaci 6BC]
Length = 484
Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats.
Identities = 281/474 (59%), Positives = 369/474 (77%), Gaps = 3/474 (0%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+ Y YGF T I+ + +GL+E+ I IS +NEP ++L++RL AY+ W +++P+WAR+
Sbjct: 13 EDYPYGFVTPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQHWKKLQEPAWARL 72
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
YP ID+D + Y++APK L++ DPE+L T++KLGIP+ EQ+ L VQ VAVD
Sbjct: 73 SYPTIDYDSIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKRLLNVQN--VAVD 130
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
VFDSVS+ TTFKE L K+GVIF ++EAI E+P+LVKKYL +VV DN++AALN+AVF
Sbjct: 131 LVFDSVSIGTTFKEALDKAGVIFCSMNEAIREYPELVKKYLGSVVSHRDNYFAALNAAVF 190
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+DGSFVY+PKGVRCPME+STYFRIN+K +GQFERTLIIA++ S+VSYLEGCTAP NQ
Sbjct: 191 SDGSFVYVPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEGCTAPSYSSNQ 250
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQ-GKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LHAAVVELVA + A ++YSTVQNW+ GD + GKGGIYNFVTKRG C G +SKISW+Q+E
Sbjct: 251 LHAAVVELVAHERAVVRYSTVQNWFSGDKKTGKGGIYNFVTKRGLCAGYKSKISWSQVEV 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
G+AITWKYPSC+LRG++S GEFYSIA+++G Q D+GTKM+H+ + TTS IVSKGIS+
Sbjct: 311 GAAITWKYPSCILRGKESVGEFYSIALTSGKMQADTGTKMIHVGEKTTSTIVSKGISSED 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S+NT+R VS+ GA SRN TQCDS+LIG CGA+T P I +NS ++EHEATTSK+
Sbjct: 371 SHNTFRSLVSISEGAVGSRNHTQCDSMLIGRACGAYTDPKISVENSRSSVEHEATTSKLR 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L Y RG+ E A++L+V+GF RE++++LP+EFA EA KL+ + LE SVG
Sbjct: 431 ADQLMYLRSRGLSAEEAVSLVVHGFCREIIEQLPLEFAREASKLLFVKLENSVG 484
>gi|325567125|ref|ZP_08143792.1| FeS assembly protein SufB [Enterococcus casseliflavus ATCC 12755]
gi|325158558|gb|EGC70704.1| FeS assembly protein SufB [Enterococcus casseliflavus ATCC 12755]
Length = 463
Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 286/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF ++Q V +GL EDI+R IS K EP+WMLE+RL + + M +W
Sbjct: 5 ELEEYKFGFHDDVQPVFSTGEGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY P + DDV ++ T+E++GIP E+ LAG
Sbjct: 65 GP-DLSDIDFDAIKYYQKPSDRPA-RDWDDVPEKIKETFERIGIPEAERAYLAGAS---- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 119 ---AQYESEVVYHNMKEEFEKLGIVFTDTDSALKEYPELFKQYFSKLVPPTDNKLAALNS 175
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 176 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 235
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ L +A +Y+T+QNW +YN VTKR + + W
Sbjct: 236 SNSLHAAIVEIFTLKDAYCRYTTIQNW-------SDNVYNLVTKRAKAL-EGATVEWIDG 287
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 288 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 347
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + + TIP+ E NS +LEHEA SK
Sbjct: 348 DGGAVNYRGQVTFGKKSAGSISHIECDTIIMDDLSKSDTIPFNEIHNSQVSLEHEAKVSK 407
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 408 ISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 463
>gi|254384170|ref|ZP_04999514.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
gi|194343059|gb|EDX24025.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
Length = 471
Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 291/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ + A +GL+ED++R ISAKKNEP+WML+ RL + + P+W
Sbjct: 13 LGTYEYGWADSDAAGAAAKRGLSEDVVRDISAKKNEPEWMLKLRLKGLKLFDKKPMPTWG 72
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ +D+ ++ TY+KLGIP E++ L
Sbjct: 73 S-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDKLGIPEAEKQRLV------AG 124
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y TV+PVGDN +A+LN+A
Sbjct: 125 VAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFQEYFGTVIPVGDNKFASLNTA 184
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ + L YFRIN + GQFERTLII DE +YV Y+EGCTAP
Sbjct: 185 VWSGGSFIYVPKGVKVDIPLQAYFRINTENMGQFERTLIIVDEDAYVHYVEGCTAPIYSS 244
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE++ +Y+T+QNW +YN VTKR + + W
Sbjct: 245 DSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRAVAY-EGATMEWVDGN 296
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA + Q D+G+KM+H+A NT+S IVSK ++ G
Sbjct: 297 IGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGSKMVHMAPNTSSNIVSKSVARG 356
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V + GA S++ CD+LL+ + T PY++ + ++ HEAT SK+
Sbjct: 357 GGRTSYRGLVEIGEGAHGSKSNVLCDALLVDTISRSDTYPYVDVREDDVSMGHEATVSKV 416
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 417 SDDQLFYLMSRGMTEFEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGSVG 471
>gi|302336610|ref|YP_003801816.1| FeS assembly protein SufB [Spirochaeta smaragdinae DSM 11293]
gi|301633795|gb|ADK79222.1| FeS assembly protein SufB [Spirochaeta smaragdinae DSM 11293]
Length = 472
Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats.
Identities = 205/490 (41%), Positives = 287/490 (58%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M T++ V I D YK GF + K KGL+E+++R ISA K E WMLE+RL
Sbjct: 1 MSETN-TMEAVAGIGDDAYKLGFHYPEHSIIKTKKGLSEEVVREISAAKGEAAWMLEFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + M P W IDFDD YYYA P + +++ ++ TYE+LGIP
Sbjct: 60 AALETFRKMPMPGWGS-DLSGIDFDDYYYYAKPVNEQSGS-WEELPQDIRDTYERLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L G V A +DS V +++ + G++FM EH +L +KY ++
Sbjct: 118 AERRFLGG-------VGAQYDSEMVYHKIRKDFESKGILFMDTETGEREHEELFRKYFAS 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN +AALN+AV++ GSFVY+PKGV+ + L YFRIN K QFERTLI+ DEG+
Sbjct: 171 VVPSTDNKFAALNAAVWSGGSFVYVPKGVKVDIPLQAYFRINTKSLAQFERTLIVVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+V Y+EGCTAP ++ LH VVE+VAL A ++YST+QNW +YN VT+R
Sbjct: 231 FVHYIEGCTAPIYAKDSLHTGVVEIVALPGARVRYSTIQNW-------STNVYNLVTQRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS T KYP +L GE + GE SIA + Q+ D+G KM+HLA
Sbjct: 284 KAHA-GASVEWVDGNIGSKSTMKYPCVVLAGEGAHGEVLSIAFAGRGQEQDAGGKMIHLA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S I SK IS ++YRG V V ++ +CD+L++ ++T P ++ +
Sbjct: 343 NNTSSVITSKSISKDGGISSYRGLVKVAPHLRGVKSKVECDALILDEKSTSNTYPTMDIQ 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+EHEA SKIS+E LFY RGI EE A +IV GF+ ++++LPME+AVE +L
Sbjct: 403 TDDVRMEHEAKVSKISEEELFYLQSRGIDEEEAAKMIVAGFIDPLVRELPMEYAVELNRL 462
Query: 480 IDISLEGSVG 489
ID+ +EG+VG
Sbjct: 463 IDLEMEGAVG 472
>gi|11465463|ref|NP_045146.1| putative ABC transporter [Cyanidium caldarium]
gi|14548003|sp|Q9TLX2|YCF24_CYACA RecName: Full=UPF0051 protein ycf24
gi|6466366|gb|AAF12948.1|AF022186_71 unknown [Cyanidium caldarium]
Length = 483
Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats.
Identities = 276/485 (56%), Positives = 358/485 (73%), Gaps = 5/485 (1%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
R+ ++ I YKYGF T IQ ++ PKG+NE+IIR +S KK EPD++L++RL AY+
Sbjct: 4 RKKSSNIQNILNKPYKYGFSTEIQSEEFPKGINEEIIRLMSHKKQEPDFILKFRLKAYQI 63
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
W M+ P W + + I+F+D+ YA+PK G + E+L T+EKLG+PI+
Sbjct: 64 WKKMQAPDWGHLHHNEINFNDVLCYASPKLEQGKNKAQTISEEILATFEKLGVPIKPNNK 123
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
K+AVDAVFDS+S TT ++ELK+ G+IF ISEAI +P+L+KKYL ++VP G
Sbjct: 124 -----QPKIAVDAVFDSISFGTTLQKELKEQGIIFCSISEAIKAYPNLIKKYLGSIVPAG 178
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN++AALNSAVFTDGSF YIPK +RCP++LSTYFRIN K GQFERTLIIADE S+V+YL
Sbjct: 179 DNYFAALNSAVFTDGSFCYIPKNIRCPVDLSTYFRINNKEAGQFERTLIIADENSFVNYL 238
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAPQ D NQLHAAVVEL+ NA I YSTVQNWY G+++G+GG+YNFVTKRG C+G
Sbjct: 239 EGCTAPQFDTNQLHAAVVELICFKNATINYSTVQNWYAGNNKGEGGVYNFVTKRGLCQGE 298
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
SKISWTQLETGSAITWKYPSCLL+G++S GEF+S+ ++N Q+ D+GTKMLH + + S
Sbjct: 299 NSKISWTQLETGSAITWKYPSCLLKGKRSTGEFFSVTLTNNAQEADTGTKMLHFGRQSKS 358
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
++SKGIS G S NTYRG V + A +S N +QCDSLLIG ++T P + NS
Sbjct: 359 LVISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDSLLIGKGSESNTYPNLHVHNSLSK 418
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+EHEA S+I +E +FY QRGI E A+ +IV+GF ++V KLPMEFA+EA KL++I L
Sbjct: 419 VEHEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFCQDVCNKLPMEFALEANKLLNIKL 478
Query: 485 EGSVG 489
EGS+G
Sbjct: 479 EGSIG 483
>gi|288905676|ref|YP_003430898.1| FeS cluster formation protein SufB, paralogous protein
[Streptococcus gallolyticus UCN34]
gi|325978706|ref|YP_004288422.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288732402|emb|CBI13974.1| putative FeS cluster formation protein SufB, paralogous protein
[Streptococcus gallolyticus UCN34]
gi|325178634|emb|CBZ48678.1| FeS assembly protein SufB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 461
Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats.
Identities = 192/475 (40%), Positives = 283/475 (59%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+Y YGF ++ KGL E+I+R IS KNEPDWMLE+RL + + + P W
Sbjct: 4 NREYDYGFHDDVNPTYSTGKGLTEEIVRNISKVKNEPDWMLEYRLKSLELFHKLPMPDWG 63
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFDD+ Y+ S + DDV ++ +T+E+LGIP E++ L+G
Sbjct: 64 P-DLSGIDFDDVIYFQK-LSDRRANNWDDVPDKIKQTFERLGIPEAERQFLSGAV----- 116
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V K+E KK G+IF A+ E+PDL KKY +V ++ +AALN A
Sbjct: 117 --AQYESEVVYHNMKDEFKKQGIIFTDTDTALQEYPDLFKKYFGKIVSNSEHKFAALNGA 174
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ G+F+Y+PKGV+C + + TYFRIN + GQFER+LII DEG+ + Y+EGCTAP
Sbjct: 175 VWSGGTFIYVPKGVQCEIPVQTYFRINGENAGQFERSLIIVDEGASIQYIEGCTAPNYTT 234
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LHAA VE++ +A +Y+T+QNW +YN VT+RG + W
Sbjct: 235 NSLHAATVEIIVKRDASFRYTTIQNW-------SDNVYNLVTERGTV-EENGMLEWIDGN 286
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP +L G + S+A +N Q +D+G K+ H A +T+S ++SK ++
Sbjct: 287 LGSKVNMKYPCSILNGPHARTSVLSMAFANYGQHLDAGCKVYHNAPHTSSTLISKSVAKD 346
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + + S++ +CD++L+ + + TIP+ E NS+ LEHEA SK+
Sbjct: 347 GGKTDYRGSVYFGKNSGGSKSHIECDTILMDDLSSSDTIPFNEIHNSNVALEHEAKVSKV 406
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ L+Y + RGI EE A A+IVNGF+ + ++LPME+AVE LI +S+EGSVG
Sbjct: 407 SEDQLYYMMSRGISEEEATAMIVNGFMEPITKELPMEYAVELNSLITMSMEGSVG 461
>gi|152966861|ref|YP_001362645.1| FeS assembly protein SufB [Kineococcus radiotolerans SRS30216]
gi|151361378|gb|ABS04381.1| FeS assembly protein SufB [Kineococcus radiotolerans SRS30216]
Length = 478
Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats.
Identities = 199/475 (41%), Positives = 294/475 (61%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y+YG+ ++++ A +GL+E+++R ISA K+EP+WML RL A R + P+W
Sbjct: 20 MGKYQYGWADSDLAGSTARRGLSEEVVRNISALKDEPEWMLALRLKALRLFGRKPMPNWG 79
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ D++ ++ TY++LGIP E++ L
Sbjct: 80 S-DLSGIDFDNIKYFVRSTEKQATS-WDELPEDIKATYDRLGIPEAEKQRLI------AG 131
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF+ + EH +L K+Y TV+PVGDN +A+LN+A
Sbjct: 132 VAAQYESEVVYHQIREDLEEKGVIFVDTDTGLREHEELFKEYFGTVIPVGDNKFASLNTA 191
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP
Sbjct: 192 VWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCTAPIYQS 251
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+AVVE+V NA ++Y+T+QNW +YN VTKR + + W
Sbjct: 252 DSLHSAVVEIVVKKNARVRYTTIQNW-------SNNVYNLVTKR-ATAAEGATMEWVDGN 303
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYP+ L GE + GE SIA++ Q D+G KM+H A +T S IVSK I+ G
Sbjct: 304 IGSKVTMKYPAIYLMGEHAKGETLSIAMAGEGQHQDAGAKMVHAAPHTASSIVSKSIARG 363
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG + V GA HS + +CD+LL+ + T PY + + + HEAT SK+
Sbjct: 364 GGRTSYRGLIQVLEGAHHSASTVRCDALLVDTISRSDTYPYNDIREDDVVMGHEATVSKV 423
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SD+ LFY + RG+ E+ A+A+IV GF+ V ++LPME+A+E +LI++ +EG+VG
Sbjct: 424 SDDQLFYLMSRGMAEDEAMAMIVRGFIEPVARELPMEYALELNRLIELQMEGAVG 478
>gi|256371353|ref|YP_003109177.1| FeS assembly protein SufB [Acidimicrobium ferrooxidans DSM 10331]
gi|256007937|gb|ACU53504.1| FeS assembly protein SufB [Acidimicrobium ferrooxidans DSM 10331]
Length = 466
Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats.
Identities = 204/478 (42%), Positives = 290/478 (60%), Gaps = 17/478 (3%)
Query: 13 KIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+ +D+YK G+ K KGL+ +I+ +S K EP+WM +RL + +
Sbjct: 5 DLALDRYKLGWSDEEAYVFKPRKGLSREIVEEMSRIKGEPEWMRRFRLRSLDYFFRRPMA 64
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
W + P +DFDD+YYY P + + + RT+++LGIP E++ LAG
Sbjct: 65 PWFAVNMPDLDFDDIYYYIKPTDRQ-VDQWEALPETIKRTWDRLGIPEAERKYLAG---- 119
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
V A ++S V +EEL + GVIF + A+ E+PDLV++Y TV+P DN +AAL
Sbjct: 120 ---VTAQYESEVVYHRNREELAQQGVIFTDMDSAVREYPDLVRQYFGTVIPPNDNKFAAL 176
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
NSAV++ GSF+Y+P GV+ M L YFRIN + GQFERTLIIADEG+ V Y+EGC+AP
Sbjct: 177 NSAVWSGGSFIYVPPGVKVDMPLQAYFRINAENMGQFERTLIIADEGAQVHYIEGCSAPV 236
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ LH+AVVEL+A A I Y+T+QNW +YN VTKR +++ W
Sbjct: 237 YSSDSLHSAVVELIAKPGARITYTTIQNW-------SSNVYNLVTKRARAEAE-ARVEWI 288
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS +T KYPS L G ++ GE S+A + Q D+G KM+H A TTS IVSK I
Sbjct: 289 DGNIGSRLTMKYPSVYLVGPKASGEVLSVAYAGAGQHQDTGAKMIHAAPETTSTIVSKSI 348
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S N TYRG V V GA +R+F +CD+LL+ ++ + T PY+E + + HEAT
Sbjct: 349 SKDGGNATYRGLVHVDDGAEGARSFVRCDALLLDDHSVSETKPYMEVAERASWIGHEATI 408
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SK+SD+ LFY + RG+ E A+++IVNGF+ V + LPME+AVE +LI++ ++G+VG
Sbjct: 409 SKVSDDQLFYLMSRGLSESQAMSMIVNGFIEPVTRTLPMEYAVEWSRLIELQMDGAVG 466
>gi|269795493|ref|YP_003314948.1| Iron-regulated ABC transporter membrane component SufB
[Sanguibacter keddieii DSM 10542]
gi|269097678|gb|ACZ22114.1| Iron-regulated ABC transporter membrane component SufB
[Sanguibacter keddieii DSM 10542]
Length = 482
Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats.
Identities = 196/489 (40%), Positives = 292/489 (59%), Gaps = 19/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ + + I Y YG+ + A +G++ED++R ISA KNEP+WML+ RL
Sbjct: 12 PQTQSDEEIIASI--GSYGYGWHDSDAAGALARRGVDEDVVRNISALKNEPEWMLKLRLK 69
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+ + + P+W IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 70 SLKLFEKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQATS-WEDLPADIKATYDKLGIPEA 127
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A ++S V +E+L++ GVIF+ + EHP++ ++Y +V
Sbjct: 128 EKQRLV------SGVAAQYESEVVYHQIREDLEEQGVIFLDTDTGLREHPEIFEQYFGSV 181
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+P GDN +AALN+AV++ GSFVY+P GV + L YFRIN + GQFERTLIIADEGSY
Sbjct: 182 IPAGDNKFAALNTAVWSGGSFVYVPPGVHVEIPLQAYFRINTENMGQFERTLIIADEGSY 241
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y+EGCTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR
Sbjct: 242 VHYVEGCTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKR-A 293
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H A
Sbjct: 294 TAAEGATMEWVDGNIGSKVTMKYPAIYLMGEHARGETLSIAFAGEGQHQDAGAKMVHAAP 353
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T+S IVSK ++ G +YRG V V GA HS + CD+LL+ + T PY++ +
Sbjct: 354 HTSSSIVSKSVARGGGRTSYRGLVQVLEGAEHSASTVLCDALLVDQISRSDTYPYVDVRE 413
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ HEAT S++S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI
Sbjct: 414 DDVSMGHEATVSRVSEDQLFYLMSRGMAETEAMAMIVRGFVEPIARELPMEYALELNRLI 473
Query: 481 DISLEGSVG 489
++ +EGSVG
Sbjct: 474 ELQMEGSVG 482
>gi|257870758|ref|ZP_05650411.1| FeS assembly protein SufB [Enterococcus gallinarum EG2]
gi|257804922|gb|EEV33744.1| FeS assembly protein SufB [Enterococcus gallinarum EG2]
Length = 466
Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 286/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF ++Q V +GL EDI+R IS K EP+WMLE+RL + + M +W
Sbjct: 8 ELEEYKFGFHDDVQPVFSTGEGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNW 67
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY P + DDV ++ T+E++GIP E+ LAG
Sbjct: 68 GP-DLSDIDFDAIKYYQKPSDSPA-RDWDDVPEKIKETFERIGIPEAERAYLAGAS---- 121
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G+IF A+ E+P++ K+Y S +VP DN AALNS
Sbjct: 122 ---AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPEIFKQYFSKLVPPTDNKLAALNS 178
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 179 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 238
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ L +A +Y+T+QNW +YN VTKR + + W
Sbjct: 239 SNSLHAAIVEIFTLKDAYCRYTTIQNW-------SDNVYNLVTKRAKAL-EGATVEWIDG 290
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 291 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 350
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + + TIP+ E NS +LEHEA SK
Sbjct: 351 DGGAVNYRGQVTFGKKSAGSISHIECDTIIMDDLSKSDTIPFNEIHNSQVSLEHEAKVSK 410
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 411 ISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 466
>gi|293192934|ref|ZP_06609778.1| FeS assembly protein SufB [Actinomyces odontolyticus F0309]
gi|292819990|gb|EFF78989.1| FeS assembly protein SufB [Actinomyces odontolyticus F0309]
Length = 481
Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats.
Identities = 197/484 (40%), Positives = 284/484 (58%), Gaps = 18/484 (3%)
Query: 7 TVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T D++ + + Y+YG+ + P G+NE+I+RFIS K+EP WM E RL A +
Sbjct: 15 TDDEIIE-SIGVYEYGWHDSDDYSKDVPTGINEEIVRFISEVKDEPQWMRERRLKALELF 73
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
P+W +DFD YY P +D+ E+ TY++LGIP E+ L
Sbjct: 74 ERKPMPAWGP-DLSHVDFDSFKYYVRPTDRQ-VNDWEDLPEEIRDTYDRLGIPEAEKSRL 131
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
V A ++S V +E+L++ GVIF + E+P++ ++Y VP GD
Sbjct: 132 V------SGVAAQYESEVVYQQIQEDLERQGVIFTDTDTGLREYPEIFEEYFGKCVPAGD 185
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV Y+E
Sbjct: 186 NKFSALNTAAWSGGSFVYVPKGVHVTIPLQAYFRINTSAMGQFERTLIIADEGSYVHYVE 245
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP DEN LH+ V+E+ +A ++Y+T+QNW + N VT+R
Sbjct: 246 GCTAPIYDENSLHSGVIEIFVKKDARVRYTTIQNW-------STNVLNLVTQRAMV-EEG 297
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ W G+AIT KYP+C L GE + GE SI + QQ D+G KM+H+A +T+S
Sbjct: 298 GTMEWVDGNMGAAITMKYPACFLMGEHARGETLSIGFAGPGQQQDTGAKMVHMAPHTSSS 357
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK +S G +YRG V V+ A HS++ CD+LL+ T PY++ + +
Sbjct: 358 IVSKSVSRGGGRTSYRGLVQVNARARHSKSNVLCDALLVDKISRTDTYPYVDVRTDDVEM 417
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEAT +K+S + LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++ +E
Sbjct: 418 GHEATVTKVSADQLFYLMSRGLDENEAMAMIVRGFVEPIAKELPMEYALELNRLIELQME 477
Query: 486 GSVG 489
GSVG
Sbjct: 478 GSVG 481
>gi|257866764|ref|ZP_05646417.1| FeS assembly protein SufB [Enterococcus casseliflavus EC30]
gi|257872719|ref|ZP_05652372.1| FeS assembly protein SufB [Enterococcus casseliflavus EC10]
gi|257800722|gb|EEV29750.1| FeS assembly protein SufB [Enterococcus casseliflavus EC30]
gi|257806883|gb|EEV35705.1| FeS assembly protein SufB [Enterococcus casseliflavus EC10]
Length = 466
Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 205/476 (43%), Positives = 286/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF ++Q V +GL EDI+R IS K EP+WMLE+RL + + M +W
Sbjct: 8 ELEEYKFGFHDDVQPVFSTGEGLTEDIVREISRVKQEPEWMLEFRLKSLEAFNKMPMQNW 67
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY P + DDV ++ T+E++GIP E+ LAG
Sbjct: 68 GP-DLSDIDFDAIKYYQKPSDRPA-RDWDDVPEKIKETFERIGIPEAERAYLAGAS---- 121
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 122 ---AQYESEVVYHNMKEEFEKLGIVFTDTDSALKEYPELFKQYFSKLVPQTDNKLAALNS 178
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 179 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 238
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ L +A +Y+T+QNW +YN VTKR + + W
Sbjct: 239 SNSLHAAIVEIFTLKDAYCRYTTIQNW-------SDNVYNLVTKRAKAL-EGATVEWIDG 290
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 291 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 350
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + + TIP+ E NS +LEHEA SK
Sbjct: 351 DGGAVNYRGQVTFGKKSAGSISHIECDTIIMDDLSKSDTIPFNEIHNSQVSLEHEAKVSK 410
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 411 ISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 466
>gi|119025728|ref|YP_909573.1| ABC transporter [Bifidobacterium adolescentis ATCC 15703]
gi|118765312|dbj|BAF39491.1| possible ABC transporter component [Bifidobacterium adolescentis
ATCC 15703]
Length = 506
Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 191/488 (39%), Positives = 291/488 (59%), Gaps = 19/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+++ + + + Y YG+ T+ + A KG++E+++R ISA K+EP+WMLE RL
Sbjct: 37 KIKQDDEIIEQF--GDYNYGWHDTDFAGEAAKKGIDENVVRAISADKHEPEWMLEKRLEG 94
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ P W + D DD YY P + +++ E+ TY+KLGIP E
Sbjct: 95 YRDFINRPMPQWG-VDLKDFDADDFKYYVKPIDKQA-TTWEELPDEIRSTYDKLGIPEAE 152
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +++L++ GVIF+ A+ ++P+LVKKY +
Sbjct: 153 KSRLV------SGVAAQYESEVIYNSIQKDLEEQGVIFVDTDTAVQKYPELVKKYFGKCI 206
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 207 PSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 266
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+ VVE+ +A ++Y+TVQNW +YN VT+R
Sbjct: 267 HYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNW-------SNNVYNLVTQRAYV 319
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 320 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 378
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + T P+++ +
Sbjct: 379 TSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSDTYPHVDVRED 438
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ ++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 439 NVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPISRELPMEYALELNRLVE 498
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 499 LQMEGSVG 506
>gi|317133535|ref|YP_004092849.1| FeS assembly protein SufB [Ethanoligenens harbinense YUAN-3]
gi|315471514|gb|ADU28118.1| FeS assembly protein SufB [Ethanoligenens harbinense YUAN-3]
Length = 468
Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 173/486 (35%), Positives = 268/486 (55%), Gaps = 18/486 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + V ID Y + + K KGL +I+ ISA+K++P WM E+RL +
Sbjct: 1 MSKQKSDVADIDRSMYDFR-NEDKDNFKVKKGLTPEIVEKISAEKHDPAWMREFRLKSLE 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P W +D D++ Y P + + +V E+ T+E+LGIP E+E
Sbjct: 60 IYNRTPLPKWGP-SLDELDIDNIVTYVRPDTKMAGN-WKEVPDEIKDTFERLGIPKAERE 117
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG V A +DS V +EE+ + GV++ + A+ EH D+V++Y +VP
Sbjct: 118 SLAG-------VGAQYDSEVVYHNVREEVTRQGVVYTDMESALTEHGDIVREYFMKLVPP 170
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ + AL+ AV++ GSFVY+P+GV + L +YFR+N G GQFE TLII ++G+ + +
Sbjct: 171 QDHKFVALHGAVWSGGSFVYVPEGVDVSIPLQSYFRLNAPGAGQFEHTLIIVEKGARLHF 230
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ + LHA VEL + A ++YST++NW + N TKR
Sbjct: 231 IEGCSAPKYNVTNLHAGCVELFVKEGAHLRYSTIENW-------SKNMMNLNTKRCSV-E 282
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
I W GS ++ YP +L+GE + EF I + Q +D+G+K++H A +T
Sbjct: 283 KNGSIEWVSGSFGSHVSMLYPMSILKGEGARSEFTGITFAGHGQHLDTGSKVVHAAPHTY 342
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I +K IS YRG V V A R+ C+SL++ + T+P ++ +N
Sbjct: 343 STINTKSISKDGGICVYRGGVVVGPNAHGCRSSVSCESLMLDGISKSDTVPAMDIRNDDV 402
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEA +IS+E +FY + RG+ EE A ALIV GF V ++LP+E+AVE LI +
Sbjct: 403 DIGHEARIGRISEESIFYLMSRGLSEEDARALIVRGFAEPVAKELPLEYAVEMNNLIKLE 462
Query: 484 LEGSVG 489
+EGS+G
Sbjct: 463 MEGSIG 468
>gi|50954830|ref|YP_062118.1| iron-regulated ABC-type transporter [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951312|gb|AAT89013.1| iron-regulated ABC-type transporter [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 472
Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 204/483 (42%), Positives = 296/483 (61%), Gaps = 17/483 (3%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+D+ + QY++G+ + + +GL+ ++++ IS+ KNEP+WML+ RL A + +
Sbjct: 6 IDRPELNSLGQYEFGWADSDAAGASARRGLSPEVVKDISSLKNEPEWMLQRRLKALQLFE 65
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+W IDFD++ Y+ QS +D+ ++ TYEKLGIP E++ L
Sbjct: 66 RKPMPTWG-ADLSEIDFDNIKYFVRSTEKQA-QSWEDLPEDIRNTYEKLGIPEAERQRLV 123
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
V A ++S V +E+L++ GVIF+ A+ EHP+ ++Y TV+P GDN
Sbjct: 124 ------AGVAAQYESEVVYHQIREDLEQQGVIFLDTDTALKEHPEFFEEYFGTVIPAGDN 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGSYV Y+EG
Sbjct: 178 KFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYIEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR +
Sbjct: 238 CTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKRAQA-AEGA 289
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYPS L GE + GE S+A + Q+ D+G KM+H+A T S I
Sbjct: 290 TMEWIDGNIGSKVTMKYPSIYLMGEHAKGETLSVAFAGPGQRQDAGAKMIHMAPYTQSSI 349
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSK I+ G YRG+V V A HS N +CD+LL+ + T P I+ + L
Sbjct: 350 VSKSIARGGGRAGYRGEVRVDANAHHSANTVRCDALLVDTISRSDTYPAIDIRVDDVQLG 409
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEAT S++S+E LFY + RG+PE+ AIA+IV GF+ + ++LPME+A+E KLI++ +EG
Sbjct: 410 HEATVSRVSEEQLFYLMSRGLPEDEAIAMIVRGFIEPIARELPMEYALELNKLIEMGMEG 469
Query: 487 SVG 489
SVG
Sbjct: 470 SVG 472
>gi|306831770|ref|ZP_07464927.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|304426195|gb|EFM29310.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
Length = 471
Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 192/475 (40%), Positives = 284/475 (59%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+Y YGF ++ KGL E+I+R IS KNEPDWMLE+RL + + + P W
Sbjct: 14 NREYDYGFHDDVNPTYSTGKGLTEEIVRNISKVKNEPDWMLEYRLKSLELFHKLPMPDWG 73
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFDD+ Y+ S + DDV ++ +T+E+LGIP E++ L+G
Sbjct: 74 P-DLSGIDFDDVIYFQK-LSDRRANNWDDVPDKIKQTFERLGIPEAERQFLSGAV----- 126
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V K+E KK G+IF A+ E+PDL KKY +V ++ +AALN A
Sbjct: 127 --AQYESEVVYHNMKDEFKKQGIIFTDTDTALQEYPDLFKKYFGKIVSNSEHKFAALNGA 184
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ G+F+Y+PKGV+C + + TYFRIN + GQFER+LII DEG+ + Y+EGCTAP
Sbjct: 185 VWSGGTFIYVPKGVQCEIPVQTYFRINGENAGQFERSLIIVDEGASIQYIEGCTAPNYTT 244
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LHAA VE++ +A +Y+T+QNW +YN VT+RG + W
Sbjct: 245 NSLHAATVEIIVKRDASFRYTTIQNW-------SDNVYNLVTERGTV-EENGMLEWIDGN 296
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP +L G + S+A +N Q +D+G K+ H A +T+S ++SK ++
Sbjct: 297 LGSKVNMKYPCSILNGPHARTSVLSMAFANYGQHLDAGCKVYHNAPHTSSTLISKSVAKD 356
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + ++ S++ +CD++L+ + + TIP+ E NS+ LEHEA SK+
Sbjct: 357 GGKTDYRGSVYFGKNSSGSKSHIECDTILMDDLSSSDTIPFNEIHNSNVALEHEAKVSKV 416
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ L+Y + RGI EE A A+IVNGF+ + ++LPME+AVE LI +S+EGSVG
Sbjct: 417 SEDQLYYMMSRGISEEEATAMIVNGFMEPITKELPMEYAVELNSLITMSMEGSVG 471
>gi|320539149|ref|ZP_08038820.1| component of SufBCD complex [Serratia symbiotica str. Tucson]
gi|320030787|gb|EFW12795.1| component of SufBCD complex [Serratia symbiotica str. Tucson]
Length = 504
Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 278/492 (56%), Positives = 359/492 (72%), Gaps = 25/492 (5%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ YK GF T + D+ KG+NE+++R ISAK+NEP WMLE+ L AYR WL MK+P W
Sbjct: 22 VIEGGYKEGFFTQLATDELAKGINEEVVRAISAKRNEPAWMLEFPLEAYRAWLQMKEPHW 81
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSL----------------DDVDPELLRTYEKLGI 117
+ YP +++ D YY+AP D + E+ + +LG+
Sbjct: 82 LKANYPRLNYQDYSYYSAPSCGSCDDVCAGQPGAEPPQNAVAEKDYLTHEVELAFNQLGV 141
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P+RE +VA+DA+FDSVSV TT++EEL +SGVIF EAI E+P+LV++YL
Sbjct: 142 PVRE--------GGEVAMDAIFDSVSVATTYREELAESGVIFCSFGEAIQEYPELVRQYL 193
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VVP DNF+AALN+ V +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IADE
Sbjct: 194 GRVVPGNDNFFAALNATVASDGTFVYMPKGVRCPMELSTYFRINAAKTGQFERTILIADE 253
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+ G + +GGI NFVTK
Sbjct: 254 GSYVSYIEGCSAPVRDNYQLHAAVVEVILHKDAEVKYSTVQNWFSGGEK-QGGILNFVTK 312
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C G SK+SWTQ ETGSAITWKYPS +L+G+ S GEF+S+A+++G+QQ D+GTKM+H
Sbjct: 313 RALCEGAGSKMSWTQSETGSAITWKYPSVILQGDNSIGEFFSVALTSGYQQADTGTKMIH 372
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ NT S I++KGISAG S NTYRG V + GA ++RNFTQCDS+LIG + GAHT PY+E
Sbjct: 373 IGNNTKSTIIAKGISAGHSENTYRGLVKILPGAENARNFTQCDSMLIGPHSGAHTFPYVE 432
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
++N+S LEHEATTSKI + LFYC QRGI E+ AI++IVNGF ++V +LP+EFA EA
Sbjct: 433 TRNNSAQLEHEATTSKIGVDQLFYCRQRGISEDDAISMIVNGFCKDVFSELPLEFAAEAH 492
Query: 478 KLIDISLEGSVG 489
+L+ ISLE SVG
Sbjct: 493 ELLAISLEHSVG 504
>gi|299783319|gb|ADJ41317.1| FeS assembly protein SufB [Lactobacillus fermentum CECT 5716]
Length = 468
Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 193/476 (40%), Positives = 285/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D +Y+YGF +I V +GL E+++R IS +KNEP+WML++RL AY + M P +
Sbjct: 10 DDQEYEYGFHDDIHPVFSTGRGLTEEVVRAISKEKNEPEWMLDYRLKAYEIYKAMPMPKF 69
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D + YY + + ++V +L +T+++LG+P E++ LAG
Sbjct: 70 GP-DLSELDLDHMLYYQK-MTDKKFRDWEEVPDDLKKTFDRLGVPEAERKYLAGSS---- 123
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V +EE +K G+IF A+ E+PDL K++ +V DN +AALN+
Sbjct: 124 ---AQYESEVVYHNMREEFEKLGIIFTDTDTALREYPDLFKEWFGKLVQPDDNKFAALNA 180
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ + +YFR+N + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 181 AVWSGGSFIYVPKGVQTKTPIQSYFRLNSENTGQFERTLIIVDEGASVDYVEGCTAPNYS 240
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 241 SDSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRAAAM-DHATMEWVDG 292
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 293 NLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAR 352
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+ YRG V + A S+ +CD++++ + + TIPY E S+ +EHEA SK
Sbjct: 353 TGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSDTIPYNEINCSNVAMEHEAKVSK 412
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RGI EE A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 413 ISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 468
>gi|313893274|ref|ZP_07826849.1| FeS assembly protein SufB [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442170|gb|EFR60587.1| FeS assembly protein SufB [Veillonella sp. oral taxon 158 str.
F0412]
Length = 469
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 191/485 (39%), Positives = 284/485 (58%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K + D+D+ Y + + + A GL EDIIR I + KNEP+WMLE+RL +
Sbjct: 2 EERKKTQVADMDRGVYDIKNDFEYSYIADAGLTEDIIREIWSNKNEPEWMLEFRLKSLEI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ M P+W +D +++ Y PK + ++ D+V E+ T+++LGIP E+
Sbjct: 62 YNRMGIPNWIP-DISGLDMANIHTYVKPKVDMK-ENWDEVPEEIKSTFDRLGIPEAEKTS 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + +E+L K GVI+ I A+ EH ++VKKY T++P
Sbjct: 120 LAG-------VGAQYDSEVVYHSIQEDLVKQGVIYTDIETALHEHEEIVKKYWMTLIPPT 172
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+P GV+ + L +YFR+N G GQFE T+II +EG+ + ++
Sbjct: 173 DHKWAALHGAVWSGGSFVYVPAGVQVDIPLQSYFRLNAPGAGQFEHTMIIVEEGAKLHFI 232
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ D + LHA VEL DNA ++YST++NW +YN TKR G
Sbjct: 233 EGCSAPKYDVSNLHAGAVELFVKDNATLRYSTIENW-------SKNMYNLNTKRCVV-GK 284
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS ++ YP +L GE + EF + + Q +D+G K++H A TTS
Sbjct: 285 GGTIEWVSGSFGSKVSCLYPMSILNGEGAHAEFTGVTFAGEGQFLDTGCKVVHNAPYTTS 344
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG + + A HS+ C+SL++ + TIP I +N + +
Sbjct: 345 NVNSKSISKSGGAAIYRGLLKIGPNAEHSKATVSCESLMLDAESQSDTIPAIIVENDNVD 404
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
L HEA +ISDE +FY + RGI EE A A++V GFV + ++LP+E+AVE LI++ L
Sbjct: 405 LGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVEPISKELPLEYAVEMNNLINLEL 464
Query: 485 EGSVG 489
EGS+G
Sbjct: 465 EGSIG 469
>gi|260662971|ref|ZP_05863864.1| FeS assembly protein SufB [Lactobacillus fermentum 28-3-CHN]
gi|260552592|gb|EEX25592.1| FeS assembly protein SufB [Lactobacillus fermentum 28-3-CHN]
Length = 469
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 193/476 (40%), Positives = 285/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D +Y+YGF +I V +GL E+++R IS +KNEP+WML++RL AY + M P +
Sbjct: 11 DDQEYEYGFHDDIHPVFSTGRGLTEEVVRAISKEKNEPEWMLDYRLKAYEIYKAMPMPKF 70
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D + YY + + ++V +L +T+++LG+P E++ LAG
Sbjct: 71 GP-DLSELDLDHMLYYQK-MTDKKFRDWEEVPDDLKKTFDRLGVPEAERKYLAGSS---- 124
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V +EE +K G+IF A+ E+PDL K++ +V DN +AALN+
Sbjct: 125 ---AQYESEVVYHNMREEFEKLGIIFTDTDTALREYPDLFKEWFGKLVQPDDNKFAALNA 181
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ + +YFR+N + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 182 AVWSGGSFIYVPKGVQTKTPIQSYFRLNSENTGQFERTLIIVDEGASVDYVEGCTAPNYS 241
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 242 SDSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRAAAM-DHATMEWVDG 293
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 294 NLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAR 353
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+ YRG V + A S+ +CD++++ + + TIPY E S+ +EHEA SK
Sbjct: 354 TGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSDTIPYNEINCSNVAMEHEAKVSK 413
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RGI EE A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 414 ISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 469
>gi|227824759|ref|ZP_03989591.1| iron-regulated ABC transporter membrane component [Acidaminococcus
sp. D21]
gi|226905258|gb|EEH91176.1| iron-regulated ABC transporter membrane component [Acidaminococcus
sp. D21]
Length = 469
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 177/486 (36%), Positives = 267/486 (54%), Gaps = 18/486 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E +D Y F + + K GL DI++ IS KK+EP WM ++RL +
Sbjct: 1 MDEEKKIFDSVDNLGNMYNFRNDFKYSYKTDAGLTPDIVQEISEKKDEPKWMRDFRLKSL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M P W +D ++ Y P + + +DV ++ T+++LGIP E+
Sbjct: 61 DIYNQMPYPVWGP-DISGLDMANIVTYVRPDTQMKAD-WNDVPDDIKDTFDRLGIPEAEK 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG V A +DS V + +E+L K GV++ A+ E+ D+VK + +VP
Sbjct: 119 TSLAG-------VGAQYDSEVVYHSIQEDLVKQGVVYTDFDTALKEYEDIVKSHFMKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D+ +AAL+ AV++ GSFVY+P G+ + L +YFR+N G GQFE TLII +G+ V
Sbjct: 172 PTDHKFAALHGAVWSGGSFVYVPDGIDVEIPLQSYFRLNAPGAGQFEHTLIIVGKGAKVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VEL D A + YST++NW +YN TKR
Sbjct: 232 FIEGCSAPKYNVANLHAGCVELFVGDEATLTYSTIENW-------SKNMYNMNTKRCVV- 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G I+W GS + YP +L GE + EF + + Q +D+G+K++H A NT
Sbjct: 284 GKNGTINWVTGSFGSHTSCLYPMSILNGEGAHCEFTGVTFAGKGQYLDTGSKVIHNAPNT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS I SK IS YRG V + A +++ C+SL++ + TIP I KN +
Sbjct: 344 TSNINSKSISKDGGVCIYRGSVVIGEKAEGAKSNVSCESLMLDEQSQSDTIPAIVIKNDN 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+L HEA +ISDE +FY + RG+ E+ A A++V GFV V + LP+E+AVE LI++
Sbjct: 404 VDLGHEAKIGRISDEAIFYLMSRGLSEDEARAMLVRGFVEPVSKALPLEYAVEMNNLINL 463
Query: 483 SLEGSV 488
L+GS+
Sbjct: 464 ELKGSM 469
>gi|227514951|ref|ZP_03945000.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus fermentum ATCC 14931]
gi|227086715|gb|EEI22027.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus fermentum ATCC 14931]
Length = 468
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 192/476 (40%), Positives = 284/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D +Y+YGF +I V +GL E+++R IS +KNEP+WML++RL AY + M P +
Sbjct: 10 DDQEYEYGFHDDIHPVFSTGRGLTEEVVRAISKEKNEPEWMLDYRLKAYEIYKAMPMPKF 69
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D + YY + + ++V +L +T+++LG+P E++ LAG
Sbjct: 70 GP-DLSELDLDHMLYYQK-MTDKKFRDWEEVPDDLKKTFDRLGVPEAERKYLAGSS---- 123
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V +EE +K G+IF A+ E+PDL K++ +V DN +AALN+
Sbjct: 124 ---AQYESEVVYHNMREEFEKLGIIFTDTDTALREYPDLFKEWFGKLVQPDDNKFAALNA 180
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G F+Y+PKGV+ + +YFR+N + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 181 AVWSGGYFIYVPKGVQTKTPIQSYFRLNSENTGQFERTLIIVDEGASVDYVEGCTAPNYS 240
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 241 SDSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRAAAM-DHATMEWVDG 292
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 293 NLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAR 352
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+ YRG V + A S+ +CD++++ + + TIPY E S+ +EHEA SK
Sbjct: 353 TGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSDTIPYNEINCSNVAMEHEAKVSK 412
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RGI EE A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 413 ISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 468
>gi|269118905|ref|YP_003307082.1| FeS assembly protein SufB [Sebaldella termitidis ATCC 33386]
gi|268612783|gb|ACZ07151.1| FeS assembly protein SufB [Sebaldella termitidis ATCC 33386]
Length = 470
Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 187/485 (38%), Positives = 281/485 (57%), Gaps = 17/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K D+++ Y + ++ + KGL E+IIR IS +KNEP+WMLE RL +
Sbjct: 2 EDRKKTYIADIERGVYDIKDEMKHEFTTKKGLTEEIIRTISKEKNEPEWMLEHRLKSLEV 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ + P W +D DD+ +Y P S + S DDV + T+++LGIP E+
Sbjct: 62 YNSKPMPKWG-ADLSDLDVDDIIHYLRPDSKIMSDSWDDVPDYIKNTFDRLGIPEAEKLS 120
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + EEL K GVI+ I A+ EH D+VK+Y ++ +
Sbjct: 121 LAG-------VGAQYDSEVVYHSIHEELVKQGVIYTDIETALREHEDIVKEYFMKLITMN 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV+ L +YFR+N GQFE TLII +EG+ + ++
Sbjct: 174 DHKFAALHGAVWSGGSFVYVPKGVKVDKPLQSYFRLNAAEAGQFEHTLIIVEEGADLHFI 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ +N LHA VEL ++YST++NW +YN TKR
Sbjct: 234 EGCSAPKYQKNALHAGAVELFIKKGGRLRYSTIENW-------SRNMYNLNTKRATVDAD 286
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS ++ YP +L+GE++ EF I ++ Q +D+G+K++H A TTS
Sbjct: 287 -GVIEWVSGSFGSRVSMLYPMSILKGERARCEFTGITFASTGQYLDTGSKVIHAAPYTTS 345
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG + V A ++ +C+SL++ N + TIP IE N + +
Sbjct: 346 NVHSKSISKNGGTALYRGLLRVAPNAHGCKSTVECESLMLDNESRSDTIPIIEIHNDNID 405
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA +IS+E +FY + RGI ++ A A+IV GFV + ++LP+E+AVE KLI++ L
Sbjct: 406 IGHEAKIGRISEEAIFYLMSRGISKDEAKAMIVRGFVEPISKELPLEYAVELNKLIELEL 465
Query: 485 EGSVG 489
EG++G
Sbjct: 466 EGTIG 470
>gi|184155568|ref|YP_001843908.1| hypothetical protein LAF_1092 [Lactobacillus fermentum IFO 3956]
gi|183226912|dbj|BAG27428.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
Length = 468
Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 193/476 (40%), Positives = 286/476 (60%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D +Y+YGF +IQ V +GL E+++R IS +KNEP+WML++RL AY + M P +
Sbjct: 10 DDQEYEYGFHDDIQPVFSTGRGLTEEVVRAISKEKNEPEWMLDYRLKAYEIYKAMPMPKF 69
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D + YY + + ++V +L +++++LG+P E++ LAG
Sbjct: 70 GP-DLSELDLDHMLYYQK-MTDKKFRDWEEVPDDLKKSFDRLGVPEAERKYLAGSS---- 123
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V +EE +K G+IF A+ E+PDL K++ +V DN +AALN+
Sbjct: 124 ---AQYESEVVYHNMREEFEKLGIIFTDTDTALREYPDLFKEWFGKLVQPDDNKFAALNA 180
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+PKGV+ + +YFR+N + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 181 AVWSGGSFIYVPKGVQTKTPIQSYFRLNSENTGQFERTLIIVDEGASVDYVEGCTAPNYS 240
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 241 SDSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRAAAM-DHATMEWVDG 292
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 293 NLGSKVTMKYPSVYLDGEGAKGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAR 352
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+ YRG V + A S+ +CD++++ + + TIPY E S+ +EHEA SK
Sbjct: 353 TGGSTDYRGTVRFTKNAEGSKAHVECDTIIMDDQSKSDTIPYNEINCSNVAMEHEAKVSK 412
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RGI EE A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 413 ISEEQLYYLMSRGISEEKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 468
>gi|154508721|ref|ZP_02044363.1| hypothetical protein ACTODO_01229 [Actinomyces odontolyticus ATCC
17982]
gi|153798355|gb|EDN80775.1| hypothetical protein ACTODO_01229 [Actinomyces odontolyticus ATCC
17982]
Length = 468
Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 197/484 (40%), Positives = 284/484 (58%), Gaps = 18/484 (3%)
Query: 7 TVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T D++ + + Y+YG+ + P G+NE+I+RFIS K+EP WM E RL A +
Sbjct: 2 TDDEIIE-SIGGYEYGWHDSDDYSKDVPTGINEEIVRFISEVKDEPQWMRERRLKALELF 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
P+W +DFD YY P +D+ E+ TY++LGIP E+ L
Sbjct: 61 ERKPMPAWGP-DLSHVDFDSFKYYVRPTDRQ-VNDWEDLPEEIRDTYDRLGIPEAEKSRL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
V A ++S V +E+L++ GVIF + E+P++ ++Y VP GD
Sbjct: 119 V------SGVAAQYESEVVYQQIQEDLERQGVIFTDTDTGLREYPEIFEEYFGKCVPAGD 172
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV Y+E
Sbjct: 173 NKFSALNTAAWSGGSFVYVPKGVHVTIPLQAYFRINTSAMGQFERTLIIADEGSYVHYVE 232
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP DEN LH+ V+E+ +A ++Y+T+QNW + N VT+R
Sbjct: 233 GCTAPIYDENSLHSGVIEIFVKKDARVRYTTIQNW-------STNVLNLVTQRAMV-EEG 284
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ W G+AIT KYP+C L GE + GE SI + QQ D+G KM+H+A +T+S
Sbjct: 285 GTMEWVDGNMGAAITMKYPACFLMGEHARGETLSIGFAGPGQQQDTGAKMVHMAPHTSSS 344
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK +S G +YRG V V+ A HS++ CD+LL+ T PY++ + +
Sbjct: 345 IVSKSVSRGGGRTSYRGLVQVNARARHSKSNVLCDALLVDKISRTDTYPYVDVRTDDVEM 404
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEAT +K+S + LFY + RG+ E A+A+IV GFV + ++LPME+A+E +LI++ +E
Sbjct: 405 GHEATVTKVSADQLFYLMSRGLDENEAMAMIVRGFVEPIAKELPMEYALELNRLIELQME 464
Query: 486 GSVG 489
GSVG
Sbjct: 465 GSVG 468
>gi|29839818|ref|NP_828924.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
caviae GPIC]
gi|29834165|gb|AAP04802.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 484
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 280/487 (57%), Positives = 375/487 (77%), Gaps = 4/487 (0%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++++ + + Y YGF T I+ + +GL+++ I IS + EP ++L++RL AY+
Sbjct: 1 MSQSIEDFLQ-NHQDYPYGFVTPIESEGLTRGLSKETIEEISQLRKEPSFILDFRLKAYQ 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W +++P WAR+ Y +D++++ Y++APK L++ DPE+L T++KLGIP+ EQ+
Sbjct: 60 HWKKLQEPGWARLNYNPMDYEEIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQK 119
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L VQ VAVD VFDSVS+ TTFKE L K+GVIF +SEAI EHP+L+KKYL TVV
Sbjct: 120 RLLNVQN--VAVDLVFDSVSIGTTFKEALDKAGVIFCSMSEAIREHPELIKKYLGTVVSH 177
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN++AALN+AVF+DGSFVYIPKGVRCPME+STYFRIN+K +GQFERTLIIA++ ++VSY
Sbjct: 178 RDNYFAALNAAVFSDGSFVYIPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDAFVSY 237
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ-GKGGIYNFVTKRGDCR 302
LEGCTAP NQLHAAVVELVA + A I+YSTVQNW+ GD + GKGGIYNFVTKRG C
Sbjct: 238 LEGCTAPSFSSNQLHAAVVELVAHERAVIRYSTVQNWFSGDKKTGKGGIYNFVTKRGLCA 297
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +SKISW+Q+E G+AITWKYPSC+LRG++S GEFYSIA++NG Q D+GTKM+H+ + T
Sbjct: 298 GYKSKISWSQVEVGAAITWKYPSCILRGKESVGEFYSIALTNGKMQADTGTKMIHVGEKT 357
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS IVSKGIS+ S+NT+R VS+ GA SRN+TQCDS+LIG +CGA+T P I +NS
Sbjct: 358 TSTIVSKGISSEDSHNTFRSLVSISEGAVGSRNYTQCDSMLIGQSCGAYTDPKITVENSK 417
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++EHEATTSK+ + L Y RG+ E A++L+V+GF RE++++LP+EFA EA KL+ +
Sbjct: 418 SSVEHEATTSKLRADQLMYLRSRGLSAEEAVSLVVHGFCREIIEQLPLEFAREASKLLFV 477
Query: 483 SLEGSVG 489
LE SVG
Sbjct: 478 KLENSVG 484
>gi|315604124|ref|ZP_07879190.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313830|gb|EFU61881.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 481
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 277/475 (58%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ Y+YG+ + P G+NE+I+RFIS K+EP WM E RL A + P+W
Sbjct: 23 IGSYEYGWHDSDDYSKDVPTGINEEIVRFISDVKDEPQWMRERRLKALELFERKPMPAWG 82
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+DFD YY P +D+ E+ TY++LGIP E+ L
Sbjct: 83 P-DLSHVDFDAFKYYVRPTDRQ-VNDWEDLPEEIRDTYDRLGIPEAEKSRLV------SG 134
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF + EHP++ ++Y VP GDN ++ALN+A
Sbjct: 135 VAAQYESEVVYQQIQEDLERQGVIFTDTDTGLREHPEIFEEYFGKCVPAGDNKFSALNTA 194
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV Y+EGCTAP DE
Sbjct: 195 AWSGGSFVYVPKGVHVTIPLQAYFRINTSAMGQFERTLIIADEGSYVHYVEGCTAPIYDE 254
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LH+ V+E+ +A ++Y+T+QNW + N VT+R + W
Sbjct: 255 NSLHSGVIEIFVKKDARVRYTTIQNW-------STNVLNLVTQRAIV-EEGGTMEWVDGN 306
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
G+AIT KYP+C L GE + GE SI + QQ D+G KM+H+A T+S IVSK +S G
Sbjct: 307 MGAAITMKYPACFLMGEHARGETLSIGFAGPGQQQDTGAKMVHMAPRTSSSIVSKSVSRG 366
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V+ A HS++ CD+LL+ T PY++ + + HEAT +K+
Sbjct: 367 GGRTSYRGLVQVNARARHSKSNVLCDALLVDKVSRTDTYPYVDVRTDDVEMGHEATVTKV 426
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S + LFY + RG+ E A+A IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 427 SADQLFYLMSRGLDENEAMATIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG 481
>gi|229823011|ref|ZP_04449081.1| hypothetical protein GCWU000282_00304 [Catonella morbi ATCC 51271]
gi|229787824|gb|EEP23938.1| hypothetical protein GCWU000282_00304 [Catonella morbi ATCC 51271]
Length = 467
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 198/476 (41%), Positives = 285/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
V+ Y YGF + ++ KGL+E++IR IS +K EP+WML++RL + + + K P W
Sbjct: 9 VVNDYAYGFHDDAEIIFSTGKGLSEEVIRTISKEKGEPEWMLDYRLRSLKVFRDSKLPDW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+DFDD+ YY +S DDV E+ T+E++GIP E+E LAG
Sbjct: 69 GP-DLSELDFDDIIYYQKAMDRPA-RSWDDVPDEIKETFERIGIPQAEREYLAGAA---- 122
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
++S +V K E +K G++F + E+P++ K++ TVVP DNF AALNS
Sbjct: 123 ---VQYESEAVYHNMKAEFEKLGIVFTDTDSGLREYPEIFKEHFGTVVPPTDNFEAALNS 179
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
A ++ G+F+Y+PKGV+C + L TYFRIN +GTGQFERTLII DEG+ + Y+EGCTAP
Sbjct: 180 AAWSGGTFIYVPKGVKCDIPLQTYFRINNEGTGQFERTLIIVDEGASIHYVEGCTAPTYS 239
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LHAA+VE++ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 240 TASLHAAIVEIIVKKDAYCRYTTIQNW-------SNNVYNLVTKRAHAHA-GATMEWIDG 291
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L+GE + G SIA + Q+ D+G KM+H A NT+S IVSK I+
Sbjct: 292 NLGAHTTMKYPSVYLQGEGARGTMLSIAFAGKNQKQDTGAKMIHNAPNTSSSIVSKSIAK 351
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + + S + +CD++++ + TIP+ E N +LEHEA SK
Sbjct: 352 DGGEVNYRGQVTFAKNSKRSISHIECDTIIMDQASKSDTIPFNEIHNGQVSLEHEAKVSK 411
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E LFY + RG+ E A +I+ GFV ++LPME+AVE +LI +EGSVG
Sbjct: 412 ISEEQLFYLMSRGLSESEATEMIIMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 467
>gi|94676913|ref|YP_588903.1| cysteine desulfurase activator complex subunit SufB [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94220063|gb|ABF14222.1| FeS assembly protein SufB [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 491
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 280/488 (57%), Positives = 366/488 (75%), Gaps = 15/488 (3%)
Query: 8 VDKVRKIDVDQ-YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+D +++D + Y+ GF T + ++ G++E+++R ISAK++EPDWML +RL AY+ WL
Sbjct: 13 IDTSKELDNKKKYREGFITQLATEQLEYGISEEVVRAISAKRSEPDWMLTFRLNAYQAWL 72
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPK-----SIVGPQSLDDVDPELLRTYEKLGIPIRE 121
MK+P W + Y ++++D YY+AP+ I G + + E+ T+ KLGIP+RE
Sbjct: 73 KMKEPHWLKAYYKQLNYNDYSYYSAPECSNNAKISGIKQQQYLTSEVEETFNKLGIPVRE 132
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
S+VA+DA+FDSVSV TT+ +L + G+IF S AI ++P+L++KYL +VV
Sbjct: 133 --------GSEVAIDAIFDSVSVSTTYSNQLAEQGIIFCSFSAAIQQYPELIRKYLGSVV 184
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PV DNF+AALNSAV +DG+FVYIP GVRCPMELSTYFRIN TGQFERT+IIA++ SYV
Sbjct: 185 PVNDNFFAALNSAVASDGTFVYIPPGVRCPMELSTYFRINAAQTGQFERTIIIAEKSSYV 244
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
SY+EGC+AP R QLHAAVVE++ +AEIKYST+QNW+ G KGGI+NFVTKR C
Sbjct: 245 SYIEGCSAPARKNYQLHAAVVEVIIYQDAEIKYSTIQNWFAGGEN-KGGIFNFVTKRALC 303
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G SK+SWTQ ETGSAITWKYPS +LRG+ S GEF+S+A++N QQ D+GTKM+H+ KN
Sbjct: 304 IGNNSKMSWTQAETGSAITWKYPSVILRGDNSIGEFFSVALTNSCQQADTGTKMIHIGKN 363
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T S I+SKGISAG S NTYRG V++ A+++RNFTQCDS+LIGN CGAHT P IE N+
Sbjct: 364 TKSTIISKGISAGNSENTYRGLVNIMSTASNARNFTQCDSMLIGNQCGAHTFPSIEVGNN 423
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ LEHEATTS+I + LFYC QRGI E+ AI +IVNGF +E+ KLP+EFAVEAQ+L+
Sbjct: 424 TAKLEHEATTSRIGQDQLFYCYQRGISEDNAITMIVNGFCKEIFSKLPLEFAVEAQRLLA 483
Query: 482 ISLEGSVG 489
ISLE SVG
Sbjct: 484 ISLEHSVG 491
>gi|291295172|ref|YP_003506570.1| FeS assembly protein SufB [Meiothermus ruber DSM 1279]
gi|290470131|gb|ADD27550.1| FeS assembly protein SufB [Meiothermus ruber DSM 1279]
Length = 469
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 203/474 (42%), Positives = 292/474 (61%), Gaps = 17/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
++YKYGF ++ V KA KGLN ++ IS K+EP WMLE+RL A + + P+W
Sbjct: 12 NEYKYGFVDEVKPVWKAEKGLNRRVVEAISYHKDEPAWMLEFRLRALEIYQSKPVPTWG- 70
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
++ D++Y+YA P +S D+V E+ RTYE+LGIP E+++LAG V
Sbjct: 71 ADLSGLNMDEIYFYAKPTEKRDARSWDEVPEEIRRTYERLGIPEAERKVLAG-------V 123
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A +DS V KEEL++ GVIF+ I E + H DL ++Y +TV+P DN YAALNSAV
Sbjct: 124 GAQYDSEMVYHQVKEELQRLGVIFVSIEEGLKHHEDLFREYFATVIPPEDNKYAALNSAV 183
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSFVY+PKGV+ + L YFR+N GQFERT+I+ DEG+ V Y+EGCTAP +
Sbjct: 184 WSGGSFVYVPKGVKVELPLQAYFRVNTAELGQFERTIIVVDEGAEVHYIEGCTAPTYTTD 243
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
H+ V+E+V A+ +Y+T+QNW +YN VT+R + + W
Sbjct: 244 SFHSGVIEIVVNQGAKSRYTTIQNW-------SHNMYNLVTQRALVK-KDAYHMWLDGNL 295
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L E + + SIA +N Q D+G K++ A +T IVSK IS G
Sbjct: 296 GSKVTMKYPSSYLVEEGARSDILSIAFANTGQHQDAGGKLIFAASHTGGSIVSKSISKGS 355
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
++YRG + V+ GA H + +CD+LLI T PY+E ++ + + HEAT S+++
Sbjct: 356 GRSSYRGLIKVYEGAKHVKVNVECDALLINEESRTDTYPYMEIEDDTATVGHEATVSRLN 415
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+PE+ A ALIV GF+ V ++LP+E+AVE +LI++ +EGSVG
Sbjct: 416 DEQIFYLQSRGLPEDEAAALIVRGFIEPVAKELPLEYAVELNRLIELEMEGSVG 469
>gi|256752818|ref|ZP_05493660.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus CCSD1]
gi|256748293|gb|EEU61355.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus CCSD1]
Length = 467
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 180/482 (37%), Positives = 288/482 (59%), Gaps = 21/482 (4%)
Query: 10 KVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ID Y + N++ + + KGL+++++ IS +KNEP WM ++RL A + M
Sbjct: 5 DIKEIDFSIY--DVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P+W + +D D + Y P + + +S D+V E+ RT+E+LGIP E++ LAG
Sbjct: 63 PMPTWG-VDLSQLDIDSIIAYIRPSAKMQ-RSWDEVPEEIRRTFERLGIPEAERKALAG- 119
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNF 187
V A +DS V KE L + GVIF + A+ ++PD++K+Y V D+
Sbjct: 120 ------VGAQYDSEVVYHNIKESLTQQGVIFEDMDTAVKKYPDIIKEYFMTKNVTPYDHK 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AAL++A+++ G+FVY+P+GV+ + L YFR+N G+GQFE TLIIAD+GS V ++EGC
Sbjct: 174 FAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGC 233
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
+APQ + LHA VEL + A I YST++NW YN TKR
Sbjct: 234 SAPQYSVSNLHAGCVELFVNEGARIIYSTIENW-------SKNTYNLNTKRAIV-EKDGI 285
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
I W GS T YP+ +L+GE + E+ + + Q +D+G+KM+HLA +T+S+++
Sbjct: 286 IEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDTGSKMIHLAPHTSSKVL 345
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+K IS ++YRG + + A ++ QC+ L++ + + T+P IE +N + ++ H
Sbjct: 346 AKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDNVDIGH 405
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA +ISDE +FY + RG+ E+ A A+IV GFV + + LP+E+AVE +LI + LEG+
Sbjct: 406 EAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGA 465
Query: 488 VG 489
+G
Sbjct: 466 IG 467
>gi|297195075|ref|ZP_06912473.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721536|gb|EDY65444.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
Length = 473
Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 196/490 (40%), Positives = 293/490 (59%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + +Y++G+ + A +GL+ED++R ISAKKNEP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGKYEFGWADSDAAGAAAKRGLSEDVVRDISAKKNEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + PSW IDFD++ Y+ +++ ++ TY+KLGIP
Sbjct: 60 KGLRLFDKKPMPSWGS-DLSGIDFDNIKYFVRSTEAQAAS-WEELPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L ++Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFQEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|62184698|ref|YP_219483.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
abortus S26/3]
gi|62147765|emb|CAH63509.1| putative ABC transporter [Chlamydophila abortus S26/3]
Length = 484
Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 280/474 (59%), Positives = 365/474 (77%), Gaps = 3/474 (0%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+ Y YGF T I+ + +GL+E+ I IS +NEP ++L++RL AY+ W +++P WAR+
Sbjct: 13 EDYPYGFVTPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQHWKKLQEPIWARL 72
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
YP ID+D + Y++APK L++ DPE+L T++KLGIP+ EQ+ L VQ VAVD
Sbjct: 73 SYPTIDYDSIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKRLLNVQN--VAVD 130
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
VFDSVS+ TTFKE L K+GVIF ++EAI E+P+LVKKYL VV DN++AALN+AVF
Sbjct: 131 LVFDSVSIGTTFKEALDKAGVIFCSMNEAIREYPELVKKYLGLVVSYRDNYFAALNAAVF 190
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+DGSFVY+PKGVRCPME+STYFRIN+K +GQFERTLIIA++ S+VSYLEGCTAP +Q
Sbjct: 191 SDGSFVYLPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEGCTAPSYSSHQ 250
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LHAAVVELVA + A ++YSTVQNW+ GD GKGGIYNFVTKRG C G +SKISW+Q+E
Sbjct: 251 LHAAVVELVAHERAVVRYSTVQNWFSGDRKTGKGGIYNFVTKRGLCAGYKSKISWSQVEV 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
G+AITWKYPSC+LRG++S GEFYSIA++NG Q D+GTKM+H+ + TTS IVSKGIS+
Sbjct: 311 GAAITWKYPSCILRGKESVGEFYSIALTNGKMQADTGTKMIHVGEKTTSTIVSKGISSEE 370
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S+NT+R VS+ GA SRN TQCDS+LIG CGA+T P I +NS ++EHEATTSK+
Sbjct: 371 SHNTFRSLVSISEGAVGSRNHTQCDSMLIGRACGAYTDPRISVENSQSSVEHEATTSKLR 430
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L Y RG+ E A++L+V+GF E++++LP+EFA EA KL+ + LE SVG
Sbjct: 431 ADQLMYLRSRGLNAEEAVSLVVHGFCLEIIEQLPLEFAREASKLLFVKLENSVG 484
>gi|167040942|ref|YP_001663927.1| FeS assembly protein SufB [Thermoanaerobacter sp. X514]
gi|300913847|ref|ZP_07131164.1| FeS assembly protein SufB [Thermoanaerobacter sp. X561]
gi|307266350|ref|ZP_07547889.1| FeS assembly protein SufB [Thermoanaerobacter wiegelii Rt8.B1]
gi|307725467|ref|YP_003905218.1| FeS assembly protein SufB [Thermoanaerobacter sp. X513]
gi|326391947|ref|ZP_08213453.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus JW 200]
gi|166855182|gb|ABY93591.1| FeS assembly protein SufB [Thermoanaerobacter sp. X514]
gi|300890532|gb|EFK85677.1| FeS assembly protein SufB [Thermoanaerobacter sp. X561]
gi|306918657|gb|EFN48892.1| FeS assembly protein SufB [Thermoanaerobacter wiegelii Rt8.B1]
gi|307582528|gb|ADN55927.1| FeS assembly protein SufB [Thermoanaerobacter sp. X513]
gi|325992016|gb|EGD50502.1| FeS assembly protein SufB [Thermoanaerobacter ethanolicus JW 200]
Length = 467
Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 181/482 (37%), Positives = 288/482 (59%), Gaps = 21/482 (4%)
Query: 10 KVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ID Y + N++ + + KGL+++++ IS +KNEP WM ++RL A + M
Sbjct: 5 DIKEIDFSIY--DVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P+W + +D D + Y P + + +S D+V E+ RT+E+LGIP E++ LAG
Sbjct: 63 PMPTWG-VDLSQLDIDSIIAYIRPSAKMQ-RSWDEVPEEIRRTFERLGIPEAERKALAG- 119
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNF 187
V A +DS V KE L + GVIF + AI ++PD++K+Y V D+
Sbjct: 120 ------VGAQYDSEVVYHNIKESLTQQGVIFEDMDTAIKKYPDIIKEYFMTKNVTPYDHK 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+AAL++A+++ G+FVY+P+GV+ + L YFR+N G+GQFE TLIIAD+GS V ++EGC
Sbjct: 174 FAALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGC 233
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
+APQ + LHA VEL + A I YST++NW YN TKR
Sbjct: 234 SAPQYSVSNLHAGCVELFVNEGARIIYSTIENW-------SKNTYNLNTKRAIV-EKDGI 285
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
I W GS T YP+ +L+GE + E+ + + Q +D+G+KM+HLA +T+S+++
Sbjct: 286 IEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDTGSKMIHLAPHTSSKVL 345
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+K IS ++YRG + + A ++ QC+ L++ + + T+P IE +N + ++ H
Sbjct: 346 AKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDNVDIGH 405
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA +ISDE +FY + RG+ E+ A A+IV GFV + + LP+E+AVE +LI + LEG+
Sbjct: 406 EAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGA 465
Query: 488 VG 489
+G
Sbjct: 466 IG 467
>gi|238019151|ref|ZP_04599577.1| hypothetical protein VEIDISOL_01014 [Veillonella dispar ATCC 17748]
gi|237863850|gb|EEP65140.1| hypothetical protein VEIDISOL_01014 [Veillonella dispar ATCC 17748]
Length = 469
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 189/485 (38%), Positives = 284/485 (58%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K + D+D+ Y + + + + GL EDIIR I + KNEP+WML++RL +
Sbjct: 2 EERKKTQVADMDRGVYDIKNDFEYSYISDAGLTEDIIREIWSNKNEPEWMLDFRLKSLEI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ M P+W +D +++ Y PK + ++ D+V E+ T+++LGIP E+
Sbjct: 62 YNRMGIPNWIP-DISGLDMANIHTYVKPKVDMK-ENWDEVPEEIKSTFDRLGIPEAEKTS 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + +E+L K GVI+ I A+ EH ++VKKY T++P
Sbjct: 120 LAG-------VGAQYDSEVVYHSIQEDLVKQGVIYTDIETALHEHEEIVKKYWMTLIPPT 172
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+P GV+ + L +YFR+N G GQFE T+II +EG+ + ++
Sbjct: 173 DHKWAALHGAVWSGGSFVYVPAGVQVEIPLQSYFRLNAPGAGQFEHTMIIVEEGAKLHFI 232
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ D + LHA VEL DNA ++YST++NW +YN TKR G
Sbjct: 233 EGCSAPKYDVSNLHAGAVELFVKDNATLRYSTIENW-------SKNMYNLNTKRCVV-GK 284
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS ++ YP +L GE + EF + + Q +D+G K++H A TTS
Sbjct: 285 GGTIEWVSGSFGSRVSCLYPMSILNGEGAHAEFTGVTFAGEGQFLDTGCKVVHNAPYTTS 344
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG + + A HS+ C+SL++ + TIP I +N + +
Sbjct: 345 NVNSKSISKSGGAAIYRGLLKIGPKAEHSKATVSCESLMLDAESQSDTIPAIIVENDNVD 404
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
L HEA +ISDE +FY + RGI EE A A++V GFV + ++LP+E+AVE LI++ L
Sbjct: 405 LGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVEPISKELPLEYAVEMNNLINLEL 464
Query: 485 EGSVG 489
EGS+G
Sbjct: 465 EGSIG 469
>gi|328956794|ref|YP_004374180.1| FeS cluster formation protein [Carnobacterium sp. 17-4]
gi|328673118|gb|AEB29164.1| FeS cluster formation protein [Carnobacterium sp. 17-4]
Length = 464
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 193/476 (40%), Positives = 285/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ + Y++GF +++ KG +E +R IS +K EP WML++RL AY + P W
Sbjct: 6 ERENYQFGFHDDVESVYTTGKGHSEATVREISKRKQEPAWMLDYRLRAYNHFNKRPMPEW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD++ YY S +S +DV ++ T+E++GIP E++ LAG
Sbjct: 66 G-ADLSEIDFDNITYY-KTVSNQPERSWEDVPDKVKETFERIGIPEAERKYLAGA----- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G++F A+ E+P++ K++ TVVP DN AALNS
Sbjct: 119 --GAQYESEVVYHNMKEEFEKMGIVFTDTDSALKEYPEIFKEHFGTVVPATDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVRC + L YFRIN++ GQFERTLI+ DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVRCDVPLQMYFRINDEAMGQFERTLIVVDEGASVHYVEGCTAPTFS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LHAA+VE++ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 237 SSSLHAAIVEIIVKKDAYCRYTTIQNW-------SNNVYNLVTKRAVA-EEGATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS LL G + G SIA++ Q D+G KM+H A NT+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSILLNGRGARGTMLSIAMAGAGQNQDTGAKMIHNAPNTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + + S + +CD++++ + + TIP+ E N + +LEHEA SK
Sbjct: 349 DGGEVNYRGQVTFGKNSDGSISHIECDTIIMDDLSKSDTIPFNEIHNGNVSLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E+ A +I+ GFV ++LPME+AVE +LI +EGSVG
Sbjct: 409 ISEEQLYYLMSRGLTEQEATEMIIMGFVEPFSKELPMEYAVELNRLIAYEMEGSVG 464
>gi|329770477|ref|ZP_08261856.1| hypothetical protein HMPREF0433_01620 [Gemella sanguinis M325]
gi|328836332|gb|EGF85998.1| hypothetical protein HMPREF0433_01620 [Gemella sanguinis M325]
Length = 466
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 196/473 (41%), Positives = 281/473 (59%), Gaps = 18/473 (3%)
Query: 18 QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+Y+YGF ++ + K KGL ++I+ IS +K EP WML++RL A + + M P+W
Sbjct: 11 EYQYGFSDKDVSIFKTEKGLTKEIVETISKRKEEPQWMLDFRLNALKEFYRMPMPTWGG- 69
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
IDF+DL YY P +S D+V E+ T+EKLGIP EQ+ LAG V
Sbjct: 70 DLSEIDFEDLTYYVKPSEKTE-RSWDEVPTEIKNTFEKLGIPEAEQKYLAG-------VS 121
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V ++ ++ G+IF A+ H ++ KKY S V DN +AALNSAV+
Sbjct: 122 AQYESEVVYHNMHKQFEEQGIIFEDTDTALKNHEEIFKKYFSKAVDFNDNKFAALNSAVW 181
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSF+Y P+ V L YFRIN + GQFERTLII ++ S + Y+EGCTAP +
Sbjct: 182 SGGSFIYCPENVSIEAPLQAYFRINSEKMGQFERTLIIIEKNSSLHYVEGCTAPTYSASS 241
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVE+ +NA +Y+T+QNW +YN VTKR + W G
Sbjct: 242 LHAAVVEIFIKENARFRYTTIQNW-------STNVYNLVTKRAIV-EKNGTMEWVDGNLG 293
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C+L GE + G SIA+++ Q +D+G+KM+HLA T+S +VSK +S
Sbjct: 294 SKLTMKYPACVLVGEGASGSTLSIAMASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGG 353
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG ++ + + SR+ +CD+L++ + TIPY KNS +LEHEA SK+S+
Sbjct: 354 KVNYRGWINFGKNSEGSRSNIECDTLILDEYSTSDTIPYNIIKNSDVSLEHEAKVSKVSE 413
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 414 EQLFYLMSRGLDEGQATEMIVMGFIEPFTKELPMEYAVELNRLISFEMEGSIG 466
>gi|317495205|ref|ZP_07953575.1| FeS assembly protein SufB [Gemella moribillum M424]
gi|316914627|gb|EFV36103.1| FeS assembly protein SufB [Gemella moribillum M424]
Length = 465
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 198/473 (41%), Positives = 281/473 (59%), Gaps = 18/473 (3%)
Query: 18 QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+Y+YGF ++ + K KGL ++I+ IS +K EP WMLE+RL A + + M P+W
Sbjct: 10 EYQYGFHDRDVSIFKTEKGLTKEIVETISKRKQEPQWMLEFRLNALKEFYRMPMPTWGG- 68
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
IDF+DL YY P +S D+V E+ T+EKLGIP EQ+ LAG V
Sbjct: 69 DLSEIDFEDLTYYVKPSEKTE-RSWDEVPEEIKNTFEKLGIPEAEQKYLAG-------VS 120
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V ++ ++ G+IF A+ H ++ K+Y S V DN +AALNSAV+
Sbjct: 121 AQYESEVVYHNMHKQFEEQGIIFEDTDTALKNHEEIFKQYFSKAVDFNDNKFAALNSAVW 180
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSF+Y PK V L YFRIN + GQFERTLII +E S + Y+EGCTAP +
Sbjct: 181 SGGSFIYCPKNVSIEAPLQAYFRINSEKMGQFERTLIIIEENSSLHYVEGCTAPTYSASS 240
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVE+ +NA +Y+T+QNW +YN VTKR + W G
Sbjct: 241 LHAAVVEIFIKENARFRYTTIQNW-------STNVYNLVTKRAIV-EKNGTMEWVDGNLG 292
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C+L GE + G SIA+++ Q +D+G+KM+HLA T+S +VSK +S
Sbjct: 293 SKLTMKYPACVLVGEGASGSTLSIAMASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGG 352
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG + + + SR+ +CD+L++ + TIPY KNS+ +LEHEA SK+S+
Sbjct: 353 KVNYRGWIHFGKDSEGSRSNIECDTLILDEYSTSDTIPYNIIKNSNVSLEHEAKVSKVSE 412
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 413 EQLFYLMSRGLDEGQATEMIVMGFIEPFTKELPMEYAVELNRLISFEMEGSIG 465
>gi|162448056|ref|YP_001621188.1| SUF system FeS cluster assembly protein [Acholeplasma laidlawii
PG-8A]
gi|161986163|gb|ABX81812.1| SUF system FeS cluster assembly protein [Acholeplasma laidlawii
PG-8A]
Length = 469
Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats.
Identities = 212/487 (43%), Positives = 293/487 (60%), Gaps = 19/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ +T K+ I V Y++GF T+ + + KG+NE I+R IS K EP WM ++RL +Y
Sbjct: 1 MSDTKTKIDNI-VGDYQFGFITDSKPIMDTGKGINEAIVRQISEIKKEPQWMTDYRLESY 59
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
++ +P+W IDF + YY S DDV ++ T+E+LGIP E+
Sbjct: 60 NNFINTPNPTWGP-DLSFIDFQEFTYYIKSTDK-AMNSWDDVPEKIKETFERLGIPQAER 117
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAGV T F+S V + KEEL+K GVI++ AI E+P+LVK+Y TVV
Sbjct: 118 NYLAGVST-------QFESEVVYHSSKEELEKLGVIYVDTDTAIREYPELVKEYFGTVVS 170
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN YAALN+AV++ GSF+Y+PKGVR L +YFRIN GQFERTLII DEG+YV+
Sbjct: 171 NKDNKYAALNAAVWSGGSFIYVPKGVRVEKPLQSYFRINSDQMGQFERTLIIVDEGAYVN 230
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP ++ LH A VE++ NA +Y+T+QNW + N VTKR
Sbjct: 231 YVEGCTAPIYQKDSLHVATVEVIVKKNATCRYTTIQNW-------STNVINLVTKRAFVY 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ W GS + KYPSC+L GE + G SIA + Q D+G +M+H+A NT
Sbjct: 284 -ENGHMEWIDGNIGSNVNMKYPSCILLGEHAKGTTISIAFAGKDQWQDAGARMIHVAPNT 342
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS I+SK I+ G YRGKVS + A S++ +CD++++ + TIP KNS
Sbjct: 343 TSNIISKSIARGGGKVNYRGKVSFGKNAKGSKSNIECDTIILDGISTSDTIPINVIKNSD 402
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
L+HEAT SKIS+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +
Sbjct: 403 VFLQHEATVSKISEEQLFYLMSRGLTEEEATEMIVMGFIEPFSKELPMEYAVELNQLIKL 462
Query: 483 SLEGSVG 489
+EGS+G
Sbjct: 463 EMEGSIG 469
>gi|239986865|ref|ZP_04707529.1| hypothetical protein SrosN1_06125 [Streptomyces roseosporus NRRL
11379]
Length = 473
Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats.
Identities = 196/490 (40%), Positives = 290/490 (59%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y++G+ + A +GL+E ++R IS KKNEP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGTYEFGWADSDAAGAAAKRGLSEAVVRDISEKKNEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + PSW IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFDKKPMPSWGS-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|167036548|ref|YP_001664126.1| FeS assembly protein SufB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320114978|ref|YP_004185137.1| FeS assembly protein SufB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166855382|gb|ABY93790.1| FeS assembly protein SufB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928069|gb|ADV78754.1| FeS assembly protein SufB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 467
Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats.
Identities = 179/482 (37%), Positives = 287/482 (59%), Gaps = 21/482 (4%)
Query: 10 KVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ID Y + N++ + + KGL+++++ IS +KNEP WM ++RL A + M
Sbjct: 5 DIKEIDFSIY--DVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P+W + +D D + Y P + + +S D+V E+ RT+E+LGIP E++ LAG
Sbjct: 63 PMPTWG-VDLSQLDIDSIIAYIRPSAKMQ-RSWDEVPEEIRRTFERLGIPEAERKALAG- 119
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNF 187
V A +DS V KE L + GVIF + A+ ++PD++K+Y V D+
Sbjct: 120 ------VGAQYDSEVVYHNIKESLTQQGVIFEDMDTAVKKYPDIIKEYFMTKNVTPYDHK 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+ AL++A+++ G+FVY+P+GV+ + L YFR+N G+GQFE TLIIAD+GS V ++EGC
Sbjct: 174 FVALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVHFIEGC 233
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
+APQ + LHA VEL + A I YST++NW YN TKR
Sbjct: 234 SAPQYTVSNLHAGCVELFVNEGARIIYSTIENW-------SKNTYNLNTKRAIV-EKDGI 285
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
I W GS T YP+ +L+GE + E+ + + Q +D+G+KM+HLA +T+S+++
Sbjct: 286 IEWISGSFGSHKTMLYPASILKGEGAKAEYTGVTFAAKGQHLDTGSKMIHLAPHTSSKVL 345
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+K IS ++YRG + + A ++ QC+ L++ + + T+P IE +N + ++ H
Sbjct: 346 AKSISKDGGISSYRGLLKIGPNAEGAKASVQCEGLMLDDISRSDTMPVIEIENDNVDIGH 405
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA +ISDE +FY + RG+ E+ A A+IV GFV + + LP+E+AVE +LI + LEG+
Sbjct: 406 EAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGA 465
Query: 488 VG 489
+G
Sbjct: 466 IG 467
>gi|182439388|ref|YP_001827107.1| hypothetical protein SGR_5595 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326780044|ref|ZP_08239309.1| FeS assembly protein SufB [Streptomyces cf. griseus XylebKG-1]
gi|178467904|dbj|BAG22424.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326660377|gb|EGE45223.1| FeS assembly protein SufB [Streptomyces cf. griseus XylebKG-1]
Length = 473
Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats.
Identities = 194/490 (39%), Positives = 290/490 (59%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y++G+ + A +GL+E ++R IS KKNEP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGTYEFGWADSDAAGAAAKRGLSEAVVRDISEKKNEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 60 KGLKLFGKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|303228997|ref|ZP_07315807.1| FeS assembly protein SufB [Veillonella atypica ACS-134-V-Col7a]
gi|302516411|gb|EFL58343.1| FeS assembly protein SufB [Veillonella atypica ACS-134-V-Col7a]
Length = 469
Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats.
Identities = 190/485 (39%), Positives = 283/485 (58%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K + D+D+ Y + N + A GL EDIIR I + KNEP+WML++RL +
Sbjct: 2 EERKKTQVADMDRGVYDIKNNFEYSYIADAGLTEDIIREIWSNKNEPEWMLDFRLKSLEI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ M+ P+W +D + +Y Y PK + ++V ++ T+++LGIP E+
Sbjct: 62 YNRMEIPNWIP-DISGLDMEHIYTYVKPKVDMKGD-WNEVPDDIKSTFDRLGIPEAEKTS 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + +E+L K GVI+ I A+ EH ++VKKY T++P
Sbjct: 120 LAG-------VGAQYDSEVVYHSIQEDLVKQGVIYTDIETALHEHEEIVKKYWMTLIPPT 172
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+P GV+ + L +YFR+N G GQFE T+II +EG+ V ++
Sbjct: 173 DHKWAALHGAVWSGGSFVYVPAGVQVDIPLQSYFRLNAPGAGQFEHTMIIVEEGAKVHFI 232
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ D + LHA VEL DNA ++YST++NW +YN TKR G
Sbjct: 233 EGCSAPKYDVSNLHAGAVELFVKDNATLRYSTIENW-------SKNMYNLNTKRCVV-GK 284
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS ++ YP +L GE + EF + + Q +D+G K++H A TTS
Sbjct: 285 GGTIEWVSGSFGSHVSCLYPMSILNGEGAHAEFTGVTFAGEGQFLDTGCKVVHNAPYTTS 344
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG + + A H++ C+SL++ + TIP I +N + +
Sbjct: 345 NVNSKSISKSGGAAIYRGLLKIGPNAEHAKATVSCESLMLDEISQSDTIPAIIVENDNVD 404
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
L HEA +ISDE +FY + RGI EE A A++V GFV + ++LP+E+AVE LI++ L
Sbjct: 405 LGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVEPISKELPLEYAVEMNNLINLEL 464
Query: 485 EGSVG 489
EGS+G
Sbjct: 465 EGSIG 469
>gi|269798091|ref|YP_003311991.1| FeS assembly protein SufB [Veillonella parvula DSM 2008]
gi|282850318|ref|ZP_06259697.1| FeS assembly protein SufB [Veillonella parvula ATCC 17745]
gi|294791962|ref|ZP_06757110.1| FeS assembly protein SufB [Veillonella sp. 6_1_27]
gi|294793826|ref|ZP_06758963.1| FeS assembly protein SufB [Veillonella sp. 3_1_44]
gi|269094720|gb|ACZ24711.1| FeS assembly protein SufB [Veillonella parvula DSM 2008]
gi|282579811|gb|EFB85215.1| FeS assembly protein SufB [Veillonella parvula ATCC 17745]
gi|294455396|gb|EFG23768.1| FeS assembly protein SufB [Veillonella sp. 3_1_44]
gi|294457192|gb|EFG25554.1| FeS assembly protein SufB [Veillonella sp. 6_1_27]
Length = 469
Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats.
Identities = 189/485 (38%), Positives = 283/485 (58%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K + D+D+ Y + + + GL EDIIR I + KNEP+WML++RL +
Sbjct: 2 EERKKTQVADMDRGVYDIKNEFEYSYISDAGLTEDIIREIWSNKNEPEWMLDFRLKSLEI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ M P+W +D +++ Y PK + ++ D+V E+ T+++LGIP E+
Sbjct: 62 YNRMGIPNWIP-DISGLDMANIHTYVKPKVDMK-ENWDEVPEEIKSTFDRLGIPEAEKTS 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + +E+L K GVI+ I A+ EH ++VKKY T++P
Sbjct: 120 LAG-------VGAQYDSEVVYHSIQEDLVKQGVIYTDIETALHEHEEIVKKYWMTLIPPT 172
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+P GV+ + L +YFR+N G GQFE T+II +EG+ + ++
Sbjct: 173 DHKWAALHGAVWSGGSFVYVPAGVQVEIPLQSYFRLNAPGAGQFEHTMIIVEEGAKLHFI 232
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ D + LHA VEL DNA ++YST++NW +YN TKR G
Sbjct: 233 EGCSAPKYDVSNLHAGAVELFVKDNATLRYSTIENW-------SKNMYNLNTKRCVV-GK 284
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS ++ YP +L GE + EF + + Q +D+G K++H A TTS
Sbjct: 285 NGTIEWVSGSFGSKVSCLYPMSILNGEGAHAEFTGVTFAGEGQFLDTGCKVVHNAPYTTS 344
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG + + A HS+ C+SL++ + TIP I +N + +
Sbjct: 345 NVNSKSISKSGGAAIYRGLLKIGPKAEHSKATVSCESLMLDAESQSDTIPAIIVENDNVD 404
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
L HEA +ISDE +FY + RGI EE A A++V GFV + ++LP+E+AVE LI++ L
Sbjct: 405 LGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVEPISKELPLEYAVEMNNLINLEL 464
Query: 485 EGSVG 489
EGS+G
Sbjct: 465 EGSIG 469
>gi|308235893|ref|ZP_07666630.1| FeS assembly protein SufB [Gardnerella vaginalis ATCC 14018]
gi|311115011|ref|YP_003986232.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019]
gi|310946505|gb|ADP39209.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Gardnerella vaginalis ATCC 14019]
Length = 529
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 198/488 (40%), Positives = 298/488 (61%), Gaps = 19/488 (3%)
Query: 5 RETVDKVRKI--DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + + +I + +Y YG+ + + A KG++E ++R ISA K+EP+WML RL
Sbjct: 58 EDKIRQDEQIVAEFGEYNYGWHDSDAAGEAAKKGIDESVVRAISADKHEPEWMLNLRLQG 117
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR +L P W + D DD YY P ++ DD+ ++ +TY++LGIP E
Sbjct: 118 YRAFLQKPMPDWG-VDLSGFDADDFKYYVRPVHDQA-KTWDDLPEDIRKTYDRLGIPEAE 175
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ L V A ++S + + +E+L GVIF+ A+ ++P+LVKKY +TV+
Sbjct: 176 KKRLV------SGVAAQYESEVIYNSIREDLASQGVIFVDTDTAVQKYPELVKKYFATVI 229
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
PV DN +AALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 230 PVDDNKFAALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 289
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LHAA VE+V +A ++Y+TVQNW +YN VT+R
Sbjct: 290 HYVEGCTAPIYSTDSLHAANVEIVVEKHARVRYTTVQNW-------SNNVYNLVTQRAYV 342
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + E S++ + Q D+G KM+HLA +
Sbjct: 343 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLSFAGRGQYQDTGAKMIHLAPH 401
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA+ S + CD+LL+ + + T P+++ +
Sbjct: 402 TSSTIVAKSISRGGGRSAYRGIVKIVKGASGSSSSVVCDALLVDDFSRSDTYPHVDVRED 461
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S ++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 462 SVSMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRQLPMEYALELNRLVE 521
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 522 LQMEGSVG 529
>gi|262037686|ref|ZP_06011129.1| FeS assembly protein SufB [Leptotrichia goodfellowii F0264]
gi|261748298|gb|EEY35694.1| FeS assembly protein SufB [Leptotrichia goodfellowii F0264]
Length = 471
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 186/487 (38%), Positives = 285/487 (58%), Gaps = 17/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E+ +K D+++ Y + + KGL E+IIR IS KKNEP+WMLE RL A
Sbjct: 1 MEESRNKTYVADIERGVYDIKDEMHHKYTTGKGLTEEIIRKISGKKNEPEWMLELRLKAL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + P+W +D + + +Y P S + + DDV + T+++LGIP E+
Sbjct: 61 EVFNSKPMPTWG-ADLSDLDINQIIHYLEPDSKIMSDNWDDVPDYIRATFDRLGIPEAEK 119
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG V A +DS V + +EL++ GV++ I A+ H D+VK+Y V+
Sbjct: 120 QSLAG-------VGAQYDSEVVYHSLHKELEEQGVVYTDIETALHTHEDIVKEYFMKVIK 172
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ D+ +AAL++AV++ GSFVY+PKGV+ L +YFR+N GQFE TLII +EG+ +
Sbjct: 173 MTDHKFAALHAAVWSGGSFVYVPKGVKVNQPLQSYFRLNAAEAGQFEHTLIIVEEGADLH 232
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ N LHA VEL+ A ++YST++NW +YN TKR
Sbjct: 233 FIEGCSAPKYRRNALHAGAVELIVRKGARLRYSTIENW-------SRNLYNLNTKRALI- 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ W GS T YP +LRGE++ EF + ++ Q +D+G K++H A T
Sbjct: 285 DEDGVMEWVSGSFGSRATMLYPGTILRGERARCEFTGVTFASTGQYLDTGCKIVHAAPYT 344
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS + SK IS N YRG + + + A ++ +C+SL++ N + TIP IE N S
Sbjct: 345 TSTVHSKSISKNGGNAFYRGFLHIAKNAHGCKSTVECESLMLDNESHSDTIPIIEINNDS 404
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++ HEA +ISDE +FY + RGI ++ A A+IV GFV + ++LP+E+AVE KLI++
Sbjct: 405 VDIGHEAKIGRISDEAIFYLMSRGISKDEAKAMIVRGFVEPISKELPLEYAVELNKLIEL 464
Query: 483 SLEGSVG 489
LEG++G
Sbjct: 465 ELEGTIG 471
>gi|303231992|ref|ZP_07318698.1| FeS assembly protein SufB [Veillonella atypica ACS-049-V-Sch6]
gi|302513322|gb|EFL55358.1| FeS assembly protein SufB [Veillonella atypica ACS-049-V-Sch6]
Length = 469
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 189/485 (38%), Positives = 282/485 (58%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K + D+D+ Y + N + A GL EDIIR I + KNEP+WML++RL +
Sbjct: 2 EERKKTQVADMDRGVYDIKNNFEYSYIADAGLTEDIIREIWSNKNEPEWMLDFRLKSLEI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ M+ P+W +D + +Y Y PK + ++V ++ T+++LGIP E+
Sbjct: 62 YNRMEIPNWIP-DISGLDMEHIYTYVKPKVDMKGD-WNEVPDDIKSTFDRLGIPEAEKTS 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + +E+L K GVI+ I A+ EH ++VKKY T++P
Sbjct: 120 LAG-------VGAQYDSEVVYHSIQEDLVKQGVIYTDIETALHEHEEIVKKYWMTLIPPT 172
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+P GV+ + L +YFR+N G GQFE T+II +E + V ++
Sbjct: 173 DHKWAALHGAVWSGGSFVYVPAGVQVDIPLQSYFRLNAPGAGQFEHTMIIVEEAAKVHFI 232
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ D + LHA VEL DNA ++YST++NW +YN TKR G
Sbjct: 233 EGCSAPKYDVSNLHAGAVELFVKDNATLRYSTIENW-------SKNMYNLNTKRCVV-GK 284
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS ++ YP +L GE + EF + + Q +D+G K++H A TTS
Sbjct: 285 GGTIEWVSGSFGSHVSCLYPMSILNGEGAHAEFTGVTFAGEGQFLDTGCKVVHNAPYTTS 344
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG + + A H++ C+SL++ + TIP I +N + +
Sbjct: 345 NVNSKSISKSGGAAIYRGLLKIGPNAEHAKATVSCESLMLDEISQSDTIPAIIVENDNVD 404
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
L HEA +ISDE +FY + RGI EE A A++V GFV + ++LP+E+AVE LI++ L
Sbjct: 405 LGHEAKIGRISDEAIFYLMTRGISEEEARAMLVRGFVEPISKELPLEYAVEMNNLINLEL 464
Query: 485 EGSVG 489
EGS+G
Sbjct: 465 EGSIG 469
>gi|282861993|ref|ZP_06271056.1| FeS assembly protein SufB [Streptomyces sp. ACTE]
gi|282563018|gb|EFB68557.1| FeS assembly protein SufB [Streptomyces sp. ACTE]
Length = 473
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 195/490 (39%), Positives = 292/490 (59%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y++G+ + A +GL+E ++R IS KKNEP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGTYEFGWADSDAAGAAAKRGLSEAVVRDISEKKNEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLKLFDKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ +HP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKQHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|154487450|ref|ZP_02028857.1| hypothetical protein BIFADO_01303 [Bifidobacterium adolescentis
L2-32]
gi|154083968|gb|EDN83013.1| hypothetical protein BIFADO_01303 [Bifidobacterium adolescentis
L2-32]
Length = 506
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 190/488 (38%), Positives = 290/488 (59%), Gaps = 19/488 (3%)
Query: 3 AVRETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+++ + + + Y YG+ T+ + A KG++E+++R ISA K+EP+WMLE RL
Sbjct: 37 KIKQDDEIIEQF--GDYNYGWHDTDFAGEAAKKGIDENVVRAISADKHEPEWMLEKRLEG 94
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
YR ++ P W + D DD YY P + +++ E+ TY+KLGIP E
Sbjct: 95 YRDFINRPMPQWG-VDLKDFDADDFKYYVKPIDKQA-TTWEELPDEIRSTYDKLGIPEAE 152
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ L V A ++S + + +++L++ GVIF+ A+ ++P+LVKKY +
Sbjct: 153 KSRLV------SGVAAQYESEVIYNSIQKDLEEQGVIFVDTDTAVQKYPELVKKYFGKCI 206
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DN ++ALN+A ++ GSFVY+PKGV + L YFRIN GQFERTLIIADEGSYV
Sbjct: 207 LSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTPNMGQFERTLIIADEGSYV 266
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGCTAP + LH+ VVE+ +A ++Y+TVQNW +YN VT+R
Sbjct: 267 HYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNW-------SNNVYNLVTQRAYV 319
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
R + W GS T KYP+C+L + S+ + Q D+G KM+HLA +
Sbjct: 320 R-EGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDTGAKMIHLAPH 378
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S IV+K IS G + YRG V + +GA S N T CD+LL+ + T P+++ +
Sbjct: 379 TSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSDTYPHVDVRED 438
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ ++ HEAT SK+S++ LFY + RG+ E+ A+ +IV GFV + ++LPME+A+E +L++
Sbjct: 439 NVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEPISRELPMEYALELNRLVE 498
Query: 482 ISLEGSVG 489
+ +EGSVG
Sbjct: 499 LQMEGSVG 506
>gi|312864903|ref|ZP_07725134.1| FeS assembly protein SufB [Streptococcus downei F0415]
gi|311100030|gb|EFQ58243.1| FeS assembly protein SufB [Streptococcus downei F0415]
Length = 461
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 186/475 (39%), Positives = 280/475 (58%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
Y +GF + KGL E+++R IS KNEP WML++RL + + + P W
Sbjct: 4 NRDYAFGFHDEVNALVSTGKGLTEEVVREISRVKNEPQWMLDYRLKSLELFHKLPLPKWG 63
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
I+FDD+ YY S +S ++V ++ T+++LGIP E++ L+G
Sbjct: 64 P-DLSGINFDDIIYYQK-LSKDRSRSWEEVPDKIKETFDRLGIPEAEKQYLSGAA----- 116
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V KEE +K G++F A+ E+P+L K+Y TV+ ++ +AALN A
Sbjct: 117 --AQYESEVVYHNMKEEFEKLGIVFTDTDTALQEYPELFKEYFGTVISNAEHKFAALNGA 174
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ G+F+Y+PKGV+CPM + TYFRIN + GQFER+L+I DEG+ + Y+EGCTAP
Sbjct: 175 VWSGGTFIYVPKGVQCPMPVQTYFRINSENAGQFERSLMIVDEGASIQYIEGCTAPSYTT 234
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LHAA VE+V +A +Y+T+QNW +YN VT+RG + W
Sbjct: 235 NSLHAASVEIVVKRDASFRYTTIQNW-------SDNVYNLVTERGTV-EENGTLEWIDGN 286
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP LL G + S+A +N Q +D+G K+ H A NT+S ++SK ++
Sbjct: 287 LGSKVNMKYPCSLLNGPHARCSVLSMAFANYGQHLDAGCKVYHNAPNTSSTLISKSVAKD 346
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + S++ +CD++L+ + TIP+ E NS LEHEA SK+
Sbjct: 347 GGRTDYRGTVRFAPNSKGSKSHIECDTILMDEESSSDTIPFNEIHNSDVALEHEAKVSKV 406
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ L+Y + RG+ EE A A+I+NGF+ + ++LPME+AVE LI++S+EGSVG
Sbjct: 407 SEDQLYYLMSRGVSEEDATAMIINGFMDPITKELPMEYAVELNTLINMSMEGSVG 461
>gi|15673770|ref|NP_267945.1| hypothetical protein L29491 [Lactococcus lactis subsp. lactis
Il1403]
gi|125624747|ref|YP_001033230.1| hypothetical protein llmg_1969 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281492381|ref|YP_003354361.1| cysteine desulfurase activator complex subunit SufB [Lactococcus
lactis subsp. lactis KF147]
gi|12724812|gb|AAK05886.1|AE006408_10 hypothetical protein L29491 [Lactococcus lactis subsp. lactis
Il1403]
gi|124493555|emb|CAL98539.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|281376045|gb|ADA65536.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. lactis KF147]
gi|300071546|gb|ADJ60946.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. cremoris NZ9000]
gi|326407276|gb|ADZ64347.1| Fe-S cluster assembly protein SufB [Lactococcus lactis subsp.
lactis CV56]
Length = 470
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 198/487 (40%), Positives = 291/487 (59%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + D+++YK+GF N +++ GL E++IR IS KNEP+WMLE+RL ++
Sbjct: 1 MTENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIREISETKNEPEWMLEFRLKSF 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + P W IDF+D+ YY P S +S +DV E+ T+EK+GIP E+
Sbjct: 61 EAFKKLDMPKWGP-DLSGIDFNDIVYYQKP-SAKAARSWEDVPQEIKDTFEKIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V K+E +K G+IF + ++P++ KKY S +VP
Sbjct: 119 SYLAGAS-------AQYESEVVYHNMKDEFEKLGIIFTDTDSGLRDYPEIFKKYFSKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ GSFVY+PKGV+C + + YFRIN + +GQFERTLII +EG+ +
Sbjct: 172 PTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQ 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + LHAAVVE+ + ++YST+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSASSLHAAVVEIFVEEGGYMRYSTIQNW-------SDNVYNLVTKRAAA- 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W GS ++ KYP+ L G + G SIA + Q D+G KM+H A NT
Sbjct: 284 EKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLSIAFAGANQNQDTGAKMIHNAPNT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I+SK I+ YRG+V+ + + S + +CD++L+ + + T+P+ E NS
Sbjct: 344 SSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E+ A +IV GF+ ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
S+EGS+G
Sbjct: 464 SMEGSIG 470
>gi|323339984|ref|ZP_08080251.1| FeS assembly protein SufB [Lactobacillus ruminis ATCC 25644]
gi|323092626|gb|EFZ35231.1| FeS assembly protein SufB [Lactobacillus ruminis ATCC 25644]
Length = 466
Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats.
Identities = 193/482 (40%), Positives = 289/482 (59%), Gaps = 19/482 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+K+ ++ +YKYGF+ +I+ + +GL E+I+R IS KNEP+WML++RL AY +
Sbjct: 3 EKIPELG-GEYKYGFKDDIKPIYTTGEGLTEEIVRKISEAKNEPEWMLDFRLKAYETYKN 61
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+ P + +DF+ + Y+ S + D+V E+ +T+++LG+P E++ LAG
Sbjct: 62 LSMPDFGP-DLSPLDFEHINYFRR-DSEGVARDWDEVPEEIKKTFDRLGVPQAERKYLAG 119
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
A ++S V +E+ K G++FM A+ E+P+LVKKY +V DN
Sbjct: 120 SS-------AQYESEVVYHNMREDFDKLGIVFMDTDSAVKEYPELVKKYFGKLVSPSDNK 172
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
AALNSAV++ GSF+Y+PK V+ + + +YFRIN +GQFERTLII DEG+ ++Y+EGC
Sbjct: 173 MAALNSAVWSGGSFIYVPKNVKVNVPIQSYFRINAGNSGQFERTLIIVDEGASINYVEGC 232
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP ++ LHAAVVE+ L ++ +Y+T+QNW +Y+ TKR +
Sbjct: 233 TAPNYSKDSLHAAVVEVYCLKDSYCRYTTIQNW-------SDNVYSLETKRARAL-ENAT 284
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYPS L G+ + G SIA + D+G +M+H A NTTS IV
Sbjct: 285 MEWVDGNLGSKVTMKYPSVYLDGKGARGTMLSIAFAGKDIDSDTGARMIHNAPNTTSSIV 344
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK + YRG V R + S +CD++++ + + TIPY E N + ++EH
Sbjct: 345 SKSLCKDGGRVDYRGHVRFGRKSDGSFAHVECDTIIMDDKSASDTIPYNEILNGNVSMEH 404
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA SKIS+E L+Y + RGIPEE A +IV GFV ++LPME+AVE +LI+ +EGS
Sbjct: 405 EAKVSKISEEQLYYLMSRGIPEEKATEMIVMGFVEPFTKELPMEYAVELNRLINYQMEGS 464
Query: 488 VG 489
VG
Sbjct: 465 VG 466
>gi|319938815|ref|ZP_08013179.1| FeS assembly protein SufB [Streptococcus anginosus 1_2_62CV]
gi|319811865|gb|EFW08131.1| FeS assembly protein SufB [Streptococcus anginosus 1_2_62CV]
Length = 461
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 188/475 (39%), Positives = 286/475 (60%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
V Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 4 VRDYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFG 63
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
I FDD+ YY S +S D+V E+ +T+E+LGIP E++ L+G
Sbjct: 64 P-DLSGIRFDDIVYYQK-LSGDRARSWDEVPDEIKKTFERLGIPEAERQFLSGTV----- 116
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V KEE K G+IF A+ E+PDLVKKY TV+ ++ ++ALNSA
Sbjct: 117 --AQYESEVVYHNMKEEFAKQGIIFTDTDTAVQEYPDLVKKYFGTVISNAEHKFSALNSA 174
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ G+F+Y+PK V+C + + TYFRIN + GQFER+LII +EG + Y+EGCTAP
Sbjct: 175 VWSGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLIIVEEGGSIQYIEGCTAPTYTT 234
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LHAA VE++ +A +Y+T+QNW +YN VT+RG + W
Sbjct: 235 NSLHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGTV-EEGGTLEWIDGN 286
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 287 LGSKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVYHNAPKTSSTLISKSVAKD 346
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+
Sbjct: 347 GGKTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKV 406
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 407 SEDQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 461
>gi|69245846|ref|ZP_00603663.1| FeS assembly protein SufB [Enterococcus faecium DO]
gi|257879173|ref|ZP_05658826.1| FeS assembly protein SufB [Enterococcus faecium 1,230,933]
gi|257882020|ref|ZP_05661673.1| FeS assembly protein SufB [Enterococcus faecium 1,231,502]
gi|257883799|ref|ZP_05663452.1| FeS assembly protein SufB [Enterococcus faecium 1,231,501]
gi|257886563|ref|ZP_05666216.1| FeS assembly protein SufB [Enterococcus faecium 1,141,733]
gi|257890003|ref|ZP_05669656.1| FeS assembly protein SufB [Enterococcus faecium 1,231,410]
gi|257892765|ref|ZP_05672418.1| FeS assembly protein SufB [Enterococcus faecium 1,231,408]
gi|260560180|ref|ZP_05832357.1| FeS assembly protein SufB [Enterococcus faecium C68]
gi|261208050|ref|ZP_05922725.1| FeS assembly protein SufB [Enterococcus faecium TC 6]
gi|289565519|ref|ZP_06445967.1| FeS assembly protein SufB [Enterococcus faecium D344SRF]
gi|293553787|ref|ZP_06674404.1| FeS assembly protein SufB [Enterococcus faecium E1039]
gi|293563474|ref|ZP_06677922.1| FeS assembly protein SufB [Enterococcus faecium E1162]
gi|293569080|ref|ZP_06680392.1| FeS assembly protein SufB [Enterococcus faecium E1071]
gi|293571246|ref|ZP_06682280.1| FeS assembly protein SufB [Enterococcus faecium E980]
gi|294615160|ref|ZP_06695044.1| FeS assembly protein SufB [Enterococcus faecium E1636]
gi|294619913|ref|ZP_06699289.1| FeS assembly protein SufB [Enterococcus faecium E1679]
gi|294620813|ref|ZP_06700017.1| FeS assembly protein SufB [Enterococcus faecium U0317]
gi|314938399|ref|ZP_07845690.1| FeS assembly protein SufB [Enterococcus faecium TX0133a04]
gi|314942324|ref|ZP_07849172.1| FeS assembly protein SufB [Enterococcus faecium TX0133C]
gi|314947743|ref|ZP_07851150.1| FeS assembly protein SufB [Enterococcus faecium TX0082]
gi|314951458|ref|ZP_07854508.1| FeS assembly protein SufB [Enterococcus faecium TX0133A]
gi|314993131|ref|ZP_07858517.1| FeS assembly protein SufB [Enterococcus faecium TX0133B]
gi|314996014|ref|ZP_07861092.1| FeS assembly protein SufB [Enterococcus faecium TX0133a01]
gi|68195548|gb|EAN09990.1| FeS assembly protein SufB [Enterococcus faecium DO]
gi|257813401|gb|EEV42159.1| FeS assembly protein SufB [Enterococcus faecium 1,230,933]
gi|257817678|gb|EEV45006.1| FeS assembly protein SufB [Enterococcus faecium 1,231,502]
gi|257819637|gb|EEV46785.1| FeS assembly protein SufB [Enterococcus faecium 1,231,501]
gi|257822617|gb|EEV49549.1| FeS assembly protein SufB [Enterococcus faecium 1,141,733]
gi|257826363|gb|EEV52989.1| FeS assembly protein SufB [Enterococcus faecium 1,231,410]
gi|257829144|gb|EEV55751.1| FeS assembly protein SufB [Enterococcus faecium 1,231,408]
gi|260073747|gb|EEW62072.1| FeS assembly protein SufB [Enterococcus faecium C68]
gi|260077634|gb|EEW65350.1| FeS assembly protein SufB [Enterococcus faecium TC 6]
gi|289162717|gb|EFD10569.1| FeS assembly protein SufB [Enterococcus faecium D344SRF]
gi|291588261|gb|EFF20097.1| FeS assembly protein SufB [Enterococcus faecium E1071]
gi|291591980|gb|EFF23605.1| FeS assembly protein SufB [Enterococcus faecium E1636]
gi|291593850|gb|EFF25348.1| FeS assembly protein SufB [Enterococcus faecium E1679]
gi|291599598|gb|EFF30611.1| FeS assembly protein SufB [Enterococcus faecium U0317]
gi|291602080|gb|EFF32315.1| FeS assembly protein SufB [Enterococcus faecium E1039]
gi|291604476|gb|EFF33962.1| FeS assembly protein SufB [Enterococcus faecium E1162]
gi|291608653|gb|EFF37941.1| FeS assembly protein SufB [Enterococcus faecium E980]
gi|313589768|gb|EFR68613.1| FeS assembly protein SufB [Enterococcus faecium TX0133a01]
gi|313592371|gb|EFR71216.1| FeS assembly protein SufB [Enterococcus faecium TX0133B]
gi|313596415|gb|EFR75260.1| FeS assembly protein SufB [Enterococcus faecium TX0133A]
gi|313598941|gb|EFR77786.1| FeS assembly protein SufB [Enterococcus faecium TX0133C]
gi|313642297|gb|EFS06877.1| FeS assembly protein SufB [Enterococcus faecium TX0133a04]
gi|313645723|gb|EFS10303.1| FeS assembly protein SufB [Enterococcus faecium TX0082]
Length = 463
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 198/476 (41%), Positives = 284/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V +GL E++IR +S K EP+WMLE+RL + + M +W
Sbjct: 5 ELEEYKFGFHDDVEPVFSTGEGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY P + +DV ++ T+EK+GIP E+ LAG
Sbjct: 65 GP-DLSDIDFDAIKYYQKPSDKPA-RDWEDVPEKIKDTFEKIGIPEAERAYLAGAS---- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K+E +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 119 ---AQYESEVVYHNMKDEFEKLGIVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNS 175
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ + Y+EGCTAP
Sbjct: 176 AVWSGGTFIYVPKGVKVDVPLQTYFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYS 235
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 236 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 287
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 288 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 347
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 348 DGGEVNYRGQVTFAKNSAGSISHIECDTIIMDEWSKSDTIPFNEIHNSQVSLEHEAKVSK 407
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 408 ISEEQLYYLMSRGLTESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 463
>gi|170782335|ref|YP_001710668.1| hypothetical protein CMS_1975 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156904|emb|CAQ02072.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 472
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 201/483 (41%), Positives = 294/483 (60%), Gaps = 17/483 (3%)
Query: 8 VDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+D+ + QY++G+ ++ A +G++ ++ IS +K+EP+WML R+ Y +
Sbjct: 6 IDRPELESLGQYEFGWSDSDVAGASAKRGISPQVVADISRRKSEPEWMLANRMKGYELFG 65
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+W IDFD++ Y+ Q+ +D+ ++ TYE+LGIP E++ L
Sbjct: 66 KKPMPTWG-ADLSGIDFDNIKYFVRSTEKQA-QTWEDLPDDIKNTYERLGIPEAERQRLV 123
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
V A ++S V + ++EL+ GVIFM A+ EHPDL K+Y TV+P GDN
Sbjct: 124 ------SGVAAQYESEVVFHSIQKELEDQGVIFMDTDTALREHPDLFKEYFGTVIPAGDN 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGSYV Y+EG
Sbjct: 178 KFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYIEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP + LH+AVVE++ +A ++Y+T+QNW +YN VTKR +
Sbjct: 238 CTAPIYKSDSLHSAVVEIIVKKDARVRYTTIQNW-------SNNVYNLVTKR-ATAAEGA 289
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYPS L GE++ GE S+A + Q D+G KM+H+A T S I
Sbjct: 290 TMEWIDGNIGSKVTMKYPSIYLMGERAKGETLSVAFAGPGQHQDAGAKMVHMAPYTQSSI 349
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSK I+ G YRG++ V A HS N +CD+LL+ + T P I+ + L
Sbjct: 350 VSKSIARGGGRAGYRGEIRVDAAAHHSANTVRCDALLVDTISRSDTYPAIDIRVDDVQLG 409
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEAT S++S+E LFY + RG+PE+ A+A+IV GF+ + ++LPME+A+E KLI++ +EG
Sbjct: 410 HEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALELNKLIEMGMEG 469
Query: 487 SVG 489
SVG
Sbjct: 470 SVG 472
>gi|148272913|ref|YP_001222474.1| hypothetical protein CMM_1731 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830843|emb|CAN01786.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 472
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 200/483 (41%), Positives = 294/483 (60%), Gaps = 17/483 (3%)
Query: 8 VDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+D+ + QY++G+ ++ A +G++ ++ IS +K+EP+WML R+ Y +
Sbjct: 6 IDRPELESLGQYEFGWSDSDVAGASAKRGISPQVVADISRRKSEPEWMLANRMKGYELFG 65
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+W IDFD++ Y+ Q+ +D+ ++ TYE+LGIP E++ L
Sbjct: 66 KKPMPTWG-ADLSGIDFDNIKYFVRSTEKQA-QTWEDLPDDIKNTYERLGIPEAERQRLV 123
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
V A ++S V + ++EL+ GVIFM A+ EHP+L K+Y TV+P GDN
Sbjct: 124 ------SGVAAQYESEVVFHSIQKELEDQGVIFMDTDTALREHPELFKEYFGTVIPAGDN 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGSYV Y+EG
Sbjct: 178 KFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYIEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP + LH+AVVE++ +A ++Y+T+QNW +YN VTKR +
Sbjct: 238 CTAPIYKSDSLHSAVVEIIVKKDARVRYTTIQNW-------SNNVYNLVTKR-ATAAEGA 289
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYPS L GE++ GE S+A + Q D+G KM+H+A T S I
Sbjct: 290 TMEWIDGNIGSKVTMKYPSIYLMGERAKGETLSVAFAGPGQHQDAGAKMVHMAPYTQSSI 349
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSK I+ G YRG++ V A HS N +CD+LL+ + T P I+ + L
Sbjct: 350 VSKSIARGGGRAGYRGEIRVDAAAHHSANTVRCDALLVDTISRSDTYPAIDIRVDDVQLG 409
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEAT S++S+E LFY + RG+PE+ A+A+IV GF+ + ++LPME+A+E KLI++ +EG
Sbjct: 410 HEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARELPMEYALELNKLIEMGMEG 469
Query: 487 SVG 489
SVG
Sbjct: 470 SVG 472
>gi|313680302|ref|YP_004058041.1| iron-regulated ABC transporter membrane component sufb
[Oceanithermus profundus DSM 14977]
gi|313153017|gb|ADR36868.1| Iron-regulated ABC transporter membrane component SufB
[Oceanithermus profundus DSM 14977]
Length = 469
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 203/475 (42%), Positives = 288/475 (60%), Gaps = 18/475 (3%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
+ YK+GF +++ + KGL+ED++R IS K EP W+LE+RL A + P+W
Sbjct: 11 EDYKWGFADDVEPELKLKGLSEDVVRAISEAKGEPGWLLEFRLKALEIYFQKPWPTWGP- 69
Query: 77 RYPAIDFD--DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+ D YYY P +S D+V E+ RTYEKLGIP EQ++LAG
Sbjct: 70 DLSELRRQMGDFYYYVKPPVRDEARSWDEVPDEIRRTYEKLGIPEAEQKVLAG------- 122
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A +DS V + KEEL+K GVIF I + I EH +L ++Y + VVP DN +AALNSA
Sbjct: 123 VGAQYDSEMVYHSIKEELEKKGVIFKSIEDGIKEHEELFRRYFAKVVPPTDNKFAALNSA 182
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+F+ GSFVY+P GV + L YFR+N +G GQFERTLII D+G+ Y+EGCTAP
Sbjct: 183 LFSGGSFVYVPPGVDVEVPLQAYFRVNTEGFGQFERTLIIIDKGAKAHYIEGCTAPIYTT 242
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
LH V+E+V ++ AE +Y+T+QNW +YN VT+R + W
Sbjct: 243 EALHTGVIEIVVMEGAESRYTTIQNWPV-------NMYNLVTQRALVH-ENAYHMWLDGN 294
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYPS +L+G + E SIA + Q +D+G K++ A +T+ IVSK IS G
Sbjct: 295 LGSKVTMKYPSSVLKGRGARSEILSIAFAGDGQHLDTGGKLIFAAPDTSGSIVSKSISKG 354
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
++YRG + V + A ++ +CD+LLI T PY+E + + ++ HEAT S++
Sbjct: 355 EGRSSYRGLIKVPQKAERAKVNVECDALLINEASKTDTYPYMEIASETASVGHEATVSRL 414
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+D+ +FY RGIPE+ A ALIV GF+ V ++LP+EFAVE +LI++ +EGSVG
Sbjct: 415 ADDQIFYLTTRGIPEDEAAALIVRGFIEPVAKELPLEFAVELNRLIELEMEGSVG 469
>gi|239940386|ref|ZP_04692323.1| hypothetical protein SrosN15_05261 [Streptomyces roseosporus NRRL
15998]
gi|291443817|ref|ZP_06583207.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
gi|291346764|gb|EFE73668.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
Length = 473
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 196/490 (40%), Positives = 290/490 (59%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y++G+ + A +GL+E ++R IS KKNEP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGTYEFGWADSDAAGAAAKRGLSEAVVRDISEKKNEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
R + PSW IDFD++ Y+ +D+ ++ TY+KLGIP
Sbjct: 60 KGLRLFDKKPMPSWGS-DLSGIDFDNIKYFVRSTEKQAAS-WEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V +E+L++ GVIF+ A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LN+AV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNTAVWSGGSFIYVPKGVHVDISLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|227552271|ref|ZP_03982320.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecium TX1330]
gi|257895151|ref|ZP_05674804.1| FeS assembly protein SufB [Enterococcus faecium Com12]
gi|227178601|gb|EEI59573.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecium TX1330]
gi|257831716|gb|EEV58137.1| FeS assembly protein SufB [Enterococcus faecium Com12]
Length = 463
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 197/476 (41%), Positives = 284/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V +GL E++IR +S K EP+WMLE+RL + + M +W
Sbjct: 5 ELEEYKFGFHDDVEPVFSTGEGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
I+FD + YY P + +DV ++ T+EK+GIP E+ LAG
Sbjct: 65 GP-DLSDINFDAIKYYQKPSDKPA-RDWEDVPEKIKDTFEKIGIPEAERAYLAGAS---- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K+E +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 119 ---AQYESEVVYHNMKDEFEKLGIVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNS 175
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ + Y+EGCTAP
Sbjct: 176 AVWSGGTFIYVPKGVKVDVPLQTYFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYS 235
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 236 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 287
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 288 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 347
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 348 DGGEVNYRGQVTFAKNSAGSISHIECDTIIMDEWSKSDTIPFNEIHNSQVSLEHEAKVSK 407
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 408 ISEEQLYYLMSRGLTESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 463
>gi|219854088|ref|YP_002471210.1| hypothetical protein CKR_0745 [Clostridium kluyveri NBRC 12016]
gi|219567812|dbj|BAH05796.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 471
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 176/489 (35%), Positives = 280/489 (57%), Gaps = 18/489 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M+ +++ ++ I Y + V K +GL ++II IS +KN+P WM E+RL
Sbjct: 1 MILLKKNKTYIKDIIRSIYDVK-NKDKSVYKTDRGLTKEIIEEISHEKNDPAWMREFRLK 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + M PSW ++ D++ Y P + + DV ++ T++ LGIP
Sbjct: 60 ALEIYDNMSMPSWGP-DLTDLNMDNIVAYVRPDTDIKHN-WRDVPKDIKNTFDLLGIPKA 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
EQ+ LAG V A +DS V E+LKK GV++M + AI ++ +LV+ + +
Sbjct: 118 EQKSLAG-------VGAQYDSEVVYHNVSEDLKKQGVLYMDMETAIRDYEELVRPHFMKL 170
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP D+ +AAL+ AV++ GSFVY+P+GV+ + + +YFR+N G GQFE TLII ++G+
Sbjct: 171 VPPTDHKFAALHGAVWSGGSFVYVPQGVQVDIPIQSYFRLNAPGAGQFEHTLIIVEKGAK 230
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+ Y+EGC+AP+ N LHA VE+ + A +KYST++NW +YN TKR
Sbjct: 231 IHYIEGCSAPKYYVNNLHAGCVEVYIREGASLKYSTIENW-------SRNMYNLNTKRAI 283
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
I W GS ++ YP +L+GE + +F I + Q +D+G+K++H A
Sbjct: 284 V-DKNGHIEWVTGSFGSKVSMLYPMSILKGEGAKCDFTGITFAGANQYLDTGSKVVHAAP 342
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTTS + SK IS YRG +S + A +S++ C+SL++ + + TIP I N
Sbjct: 343 NTTSTVNSKSISKDGGVAIYRGLLSSTKNAVNSKSSVSCESLMLDSKSRSDTIPVINVSN 402
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ ++ HEA +IS++ +FY + RG+ EE A +IV GFV + ++LP+E+AVE LI
Sbjct: 403 NNVDIGHEAKIGRISEDAIFYLMSRGLTEEEAKGMIVTGFVEPIAKELPLEYAVEMNNLI 462
Query: 481 DISLEGSVG 489
+ L+G++G
Sbjct: 463 KVELKGTIG 471
>gi|315223164|ref|ZP_07865025.1| FeS assembly protein SufB [Streptococcus anginosus F0211]
gi|315187596|gb|EFU21350.1| FeS assembly protein SufB [Streptococcus anginosus F0211]
Length = 461
Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats.
Identities = 186/473 (39%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 6 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 64
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S ++ D+V E+ +T+E+LGIP E++ L+G
Sbjct: 65 DLSGIRFDDIVYYQK-LSGDRARNWDEVPDEIKKTFERLGIPEAERQFLSGAV------- 116
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVKKY TV+ ++ ++ALNSAV+
Sbjct: 117 AQYESEVVYHNMKEEFAKQGIIFTDTDTAVQEYPDLVKKYFGTVISNAEHKFSALNSAVW 176
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+LII +EG + Y+EGCTAP N
Sbjct: 177 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLIIVEEGGSIQYIEGCTAPTYTTNS 236
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 237 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGTV-EEGGTLEWIDGNLG 288
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 289 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVYHNAPKTSSTLISKSVAKDGG 348
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 349 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 408
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 409 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 461
>gi|258544533|ref|ZP_05704767.1| FeS assembly protein SufB [Cardiobacterium hominis ATCC 15826]
gi|258520268|gb|EEV89127.1| FeS assembly protein SufB [Cardiobacterium hominis ATCC 15826]
Length = 427
Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats.
Identities = 282/432 (65%), Positives = 357/432 (82%), Gaps = 6/432 (1%)
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGI 117
L AYR WLT++ P W + ID+ + YY+APK+ GP+SLD+VDPELLRTYEKLGI
Sbjct: 1 LAAYRHWLTLEQPDWGHLNIKPIDYQAISYYSAPKTQKDGPKSLDEVDPELLRTYEKLGI 60
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P++E+E+LAG VAVDAVFDSVSV T+FK+ L K G+IF SEA+ EHP+LV+KYL
Sbjct: 61 PLQEREMLAG-----VAVDAVFDSVSVATSFKDRLGKEGIIFCAFSEAVREHPELVRKYL 115
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+VV + DN++AALNSAVF+DGSF YIP GVRCPMELSTYFRIN TGQFERTLIIAD+
Sbjct: 116 GSVVRMDDNYFAALNSAVFSDGSFCYIPPGVRCPMELSTYFRINAANTGQFERTLIIADK 175
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+YVSYLEGCTAP+R+E+QLHAA+VE++A ++AE+KYSTVQNW+PGD G GGIYNFVTK
Sbjct: 176 GAYVSYLEGCTAPKREEHQLHAAIVEIIAHEDAEVKYSTVQNWFPGDKDGNGGIYNFVTK 235
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
RG C G RSKISWTQ+ETGSAITWKYP +L+G+ S GEFYS+A++ +QQ D+G+KM+H
Sbjct: 236 RGLCEGARSKISWTQVETGSAITWKYPGVVLKGDDSIGEFYSVALARDYQQADTGSKMIH 295
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ KNT S I+SKGIS G++ N YRG V + GAA +RNF+QCDSLLIG++CGAHT PY+
Sbjct: 296 IGKNTKSTIISKGISLGYAQNAYRGLVKILPGAAGARNFSQCDSLLIGSDCGAHTFPYLM 355
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+N + +EHEATT+KI ++ +FYC+QRG+ EE A++LIVNGF +++ Q+LPMEFAVEAQ
Sbjct: 356 VQNPTAQVEHEATTAKIGEDQIFYCMQRGLSEEDAVSLIVNGFCKQIFQELPMEFAVEAQ 415
Query: 478 KLIDISLEGSVG 489
+LI++ LEGSVG
Sbjct: 416 RLIELKLEGSVG 427
>gi|320093502|ref|ZP_08025399.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979547|gb|EFW11012.1| FeS assembly protein SufB [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 468
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 278/475 (58%), Gaps = 17/475 (3%)
Query: 16 VDQYKYGFETNIQVDK-APKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y++G+ + K P G++E I+R IS K EP WM E RL A + P+W
Sbjct: 10 IGKYEFGWHDSDDYSKGVPYGIDESIVRHISDVKGEPQWMRERRLKALELFDRKPMPAWG 69
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+DFD YY P +D+ E+ TY++LGIP E+ L
Sbjct: 70 P-DLSGVDFDAFKYYVRPTDRQ-VNDWEDLPEEIRDTYDRLGIPEAEKARLV------SG 121
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L++ GVIF + EHP++ ++Y VP GDN ++ALN+A
Sbjct: 122 VAAQYESEVVYQQIQEDLERQGVIFTDTDTGLREHPEIFEEYFGKCVPAGDNKFSALNTA 181
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGSYV Y+EGCTAP DE
Sbjct: 182 AWSGGSFVYVPKGVHVNIPLQAYFRINTQAMGQFERTLIIADEGSYVHYVEGCTAPIYDE 241
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LH+ V+E+ +A ++Y+T+QNW + N VT+R + W
Sbjct: 242 NSLHSGVIEIFVKKDARVRYTTIQNW-------STNVLNLVTQRAMV-DEGGTMEWVDGN 293
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
G+AIT KYP+C L GE + GE SI + QQ D+G KM+H+A +T+S IVSK +S G
Sbjct: 294 MGAAITMKYPACFLMGEHARGETLSIGFAGPGQQQDTGAKMVHMAPHTSSSIVSKSVSRG 353
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+YRG V V+ A HS++ CD+LL+ T PY++ + + HEAT SK+
Sbjct: 354 GGRTSYRGLVKVNARARHSKSNVLCDALLVDKVSRTDTYPYVDVRTDDVEMGHEATVSKV 413
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S + LFY + RG+ E A+A IV GFV + ++LPME+A+E +LI++ +EGSVG
Sbjct: 414 SADQLFYLMSRGLAENEAMATIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG 468
>gi|289579437|ref|YP_003478064.1| FeS assembly protein SufB [Thermoanaerobacter italicus Ab9]
gi|297545581|ref|YP_003677883.1| FeS assembly protein SufB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289529150|gb|ADD03502.1| FeS assembly protein SufB [Thermoanaerobacter italicus Ab9]
gi|296843356|gb|ADH61872.1| FeS assembly protein SufB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 467
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 181/482 (37%), Positives = 288/482 (59%), Gaps = 21/482 (4%)
Query: 10 KVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+++ID Y + N++ + + KGL+++++ IS +KNEP WM ++RL A + M
Sbjct: 5 DIKEIDFSIY--DVKDNVKYEYQTGKGLSKEVVLEISEQKNEPSWMRDFRLKALEIYQKM 62
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P+W + +D D + Y PK+ + +S ++V E+ RT+E+LGIP E+++LAG
Sbjct: 63 PMPTWG-VDLSQLDIDSIIAYIRPKAKMQ-RSWEEVPEEIRRTFERLGIPEAERKVLAG- 119
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNF 187
V A +DS V KE L + GVIF + A+ ++PD++K+Y V D+
Sbjct: 120 ------VGAQYDSEVVYHNIKENLTRQGVIFEDMDTAVKKYPDIIKEYFMTKNVTPSDHK 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+ AL++A+++ G+FVY+P+GV+ + L YFR+N G+GQFE TLIIAD+GS V ++EGC
Sbjct: 174 FVALHAAIWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADKGSEVRFIEGC 233
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
+APQ + LHA VEL + A I YST++NW YN TKR
Sbjct: 234 SAPQYSVSNLHAGCVELFVKEGARIIYSTIENW-------SKNTYNLNTKRAIV-EKDGI 285
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
I W GS T YP+ +L+G+ + E+ + + Q +D+G+KM+HLA T+S++V
Sbjct: 286 IEWVSGSFGSHKTMLYPTSVLKGKGAKAEYTGVTFAAKGQHLDTGSKMIHLAPYTSSKVV 345
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+K IS +TYRG + + A ++ QC+ L++ + + TIP IE +N + ++ H
Sbjct: 346 AKSISKDGGISTYRGFLKIGSTAEGAKASVQCEGLMLDDISRSDTIPVIEIENDNVDIGH 405
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA +ISDE +FY + RG+ E+ A A+IV GFV + + LP+E+AVE +LI + LEG+
Sbjct: 406 EAKVGRISDEQIFYLMSRGLSEDDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGA 465
Query: 488 VG 489
+G
Sbjct: 466 IG 467
>gi|88856182|ref|ZP_01130842.1| iron-regulated ABC-type transporter [marine actinobacterium
PHSC20C1]
gi|88814501|gb|EAR24363.1| iron-regulated ABC-type transporter [marine actinobacterium
PHSC20C1]
Length = 472
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 204/483 (42%), Positives = 288/483 (59%), Gaps = 17/483 (3%)
Query: 8 VDKVRKIDVDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+D+ + QY++G+ ++++ A +G+NE+++R IS KNEP+ ML+ RL +
Sbjct: 6 IDRPELNGMGQYEFGWADSDVAGASARRGINEEVVRDISTLKNEPESMLKKRLKGLELFG 65
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P W IDFD++ Y+ Q+ +D+ ++ TYEKLGIP E+ L
Sbjct: 66 RKPMPKWG-ADLSGIDFDNIKYFVRSTEKQA-QTWEDLPADIRDTYEKLGIPEAERNRLV 123
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
V A ++S V + EL+ GVIFM A+ EHP+ +Y +V+P GDN
Sbjct: 124 ------SGVAAQYESEVVFHSINSELEAQGVIFMDTDTALREHPEFFDEYFGSVIPAGDN 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALN+AV++ GSFVY+PKGV + L YFRIN + GQFERTLIIADEGSYV Y+EG
Sbjct: 178 KFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHYIEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP + LH+AVVE++ NA ++Y+T+QNW +YN VTKR +
Sbjct: 238 CTAPIYKSDSLHSAVVEIIVKKNARVRYTTIQNW-------SNNVYNLVTKRAIAH-EGA 289
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYPS L GE + GE S+A + Q D+G KM+H+A TTS I
Sbjct: 290 TMEWIDGNIGSKVTMKYPSIYLVGEHAKGETLSVAFAGPGQHQDAGAKMIHMAPYTTSSI 349
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSK ++ G YRG+V V A HS N +CD+LL+ + T P I+ + L
Sbjct: 350 VSKSVARGGGRAGYRGEVRVDEKAHHSANTVRCDALLVDTISRSDTYPAIDIRVDDVQLG 409
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEAT SK+S E LFY RG+ E+ A+A+IV GF+ + ++LPME+A E KLI++S+EG
Sbjct: 410 HEATVSKVSAEQLFYLQSRGMEEDEAMAMIVRGFIEPIARELPMEYAFELNKLIELSMEG 469
Query: 487 SVG 489
SVG
Sbjct: 470 SVG 472
>gi|312870212|ref|ZP_07730343.1| FeS assembly protein SufB [Lactobacillus oris PB013-T2-3]
gi|311094235|gb|EFQ52548.1| FeS assembly protein SufB [Lactobacillus oris PB013-T2-3]
Length = 469
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 187/474 (39%), Positives = 280/474 (59%), Gaps = 18/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
++Y+YGF +++ V +GL E+++R ISA K+EP WML++RL AY + + P +
Sbjct: 13 EKYEYGFHDDVKPVYSTGRGLTEEVVRQISAAKHEPQWMLDYRLKAYHIYKKLPMPKFGP 72
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+D ++ YY + + DV +L +T+++LG+P E++ LAG
Sbjct: 73 -DLSELDLKNMLYYQK-MTDKKFRDWKDVPEDLKKTFDRLGVPEAERKYLAGSS------ 124
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A ++S V K E K G+IF A+ E+PDL +K+ +V DN +AALN+AV
Sbjct: 125 -AQYESEVVYHNMKNEFAKLGIIFTDTDAALREYPDLFRKWFGKLVQPTDNKFAALNAAV 183
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSF+Y+PKGV+ + +YFR+N + TGQFERTLII DEG+ V Y+EGCTAP +
Sbjct: 184 WSGGSFIYVPKGVKTKTPIQSYFRLNAENTGQFERTLIIVDEGASVDYVEGCTAPNYSSD 243
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LHAAVVE+ +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 244 SLHAAVVEVNVCKDAYCRYTTIQNW-------SDNVYSLETKRAAA-AENATMEWVDGNL 295
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 296 GSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAKTG 355
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ YRG V + + S+ +CD++++ + + TIPY E N+ +EHEA SKIS
Sbjct: 356 GSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSDTIPYNEIDNAHVAMEHEAKVSKIS 415
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+E L+Y + RGI E A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 416 EEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 469
>gi|153953465|ref|YP_001394230.1| SufB [Clostridium kluyveri DSM 555]
gi|146346346|gb|EDK32882.1| Predicted SufB [Clostridium kluyveri DSM 555]
Length = 468
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 175/486 (36%), Positives = 278/486 (57%), Gaps = 18/486 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+++ ++ I Y + V K +GL ++II IS +KN+P WM E+RL A
Sbjct: 1 MKKNKTYIKDIIRSIYDVK-NKDKSVYKTDRGLTKEIIEEISHEKNDPAWMREFRLKALE 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ M PSW ++ D++ Y P + + DV ++ T++ LGIP EQ+
Sbjct: 60 IYDNMSMPSWGP-DLTDLNMDNIVAYVRPDTDIKHN-WRDVPKDIKNTFDLLGIPKAEQK 117
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG V A +DS V E+LKK GV++M + AI ++ +LV+ + +VP
Sbjct: 118 SLAG-------VGAQYDSEVVYHNVSEDLKKQGVLYMDMETAIRDYEELVRPHFMKLVPP 170
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ +AAL+ AV++ GSFVY+P+GV+ + + +YFR+N G GQFE TLII ++G+ + Y
Sbjct: 171 TDHKFAALHGAVWSGGSFVYVPQGVQVDIPIQSYFRLNAPGAGQFEHTLIIVEKGAKIHY 230
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ N LHA VE+ + A +KYST++NW +YN TKR
Sbjct: 231 IEGCSAPKYYVNNLHAGCVEVYIREGASLKYSTIENW-------SRNMYNLNTKRAIV-D 282
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
I W GS ++ YP +L+GE + +F I + Q +D+G+K++H A NTT
Sbjct: 283 KNGHIEWVTGSFGSKVSMLYPMSILKGEGAKCDFTGITFAGANQYLDTGSKVVHAAPNTT 342
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S + SK IS YRG +S + A +S++ C+SL++ + + TIP I N++
Sbjct: 343 STVNSKSISKDGGVAIYRGLLSSTKNAVNSKSSVSCESLMLDSKSRSDTIPVINVSNNNV 402
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEA +IS++ +FY + RG+ EE A +IV GFV + ++LP+E+AVE LI +
Sbjct: 403 DIGHEAKIGRISEDAIFYLMSRGLTEEEAKGMIVTGFVEPIAKELPLEYAVEMNNLIKVE 462
Query: 484 LEGSVG 489
L+G++G
Sbjct: 463 LKGTIG 468
>gi|332686996|ref|YP_004456770.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
ATCC 35311]
gi|332371005|dbj|BAK21961.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
ATCC 35311]
Length = 464
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 191/474 (40%), Positives = 275/474 (58%), Gaps = 18/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+ Y+YGF I+ V KGL+E++IR IS K EP+WML++RL + + + + P++
Sbjct: 8 EDYQYGFHDEIEPVYTTGKGLSEEVIREISRIKEEPEWMLDFRLKSLKTFYKLPTPNYGP 67
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+DFDD Y+ + +DV E+ T++ LGIP E LAG
Sbjct: 68 -DLSELDFDDFNYFIRSSDKP-VRDWEDVPEEIKTTFDVLGIPEAEHAYLAGAS------ 119
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A ++S V K+E K G+IF A+ E+P+L+K+Y +VP DN AALNSA
Sbjct: 120 -AQYESEVVYHNMKDEFTKLGIIFTDTDTALKEYPELMKEYFGKLVPPTDNKLAALNSAA 178
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ G+F+Y+PKGV+ + + +YFRIN + GQFERTLII +EG+ ++Y+EGC+AP N
Sbjct: 179 WSGGTFIYVPKGVQTDIPIQSYFRINTENEGQFERTLIIVEEGASINYVEGCSAPIYSTN 238
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LHAAVVE+ +Y+T+QNW +Y+ TKR + + W
Sbjct: 239 SLHAAVVEVYVKKGGYCRYTTIQNW-------STNVYSLETKRAQAL-ENATMEWVDGNF 290
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS T KYPS L G+++ G SIA++ +DSG +M+H A NT+S IVSK I+
Sbjct: 291 GSKTTMKYPSVYLDGQRARGTMLSIAVAKKGVVLDSGARMIHNAPNTSSTIVSKSIAKEG 350
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
YRG V R +A S + +CD+++IG+ + T PY E N+ LEHEA SKIS
Sbjct: 351 GAVDYRGTVRFGRNSAGSSSHVECDTIIIGDESTSDTFPYNEVLNNDITLEHEAKVSKIS 410
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 411 EAQLYYLMSRGISEEEATGMIVMGFVEPFTKELPMEYAVELNRLIKYEMEGSVG 464
>gi|257897763|ref|ZP_05677416.1| FeS assembly protein SufB [Enterococcus faecium Com15]
gi|257835675|gb|EEV60749.1| FeS assembly protein SufB [Enterococcus faecium Com15]
Length = 463
Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 198/476 (41%), Positives = 283/476 (59%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V +GL E++IR +S K EP+WMLE+RL + + M +W
Sbjct: 5 ELEEYKFGFHDDVEPVFSTGEGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY P + +DV ++ T+EK+GIP E+ LAG
Sbjct: 65 GP-DLSDIDFDAIKYYQKPSDKPA-RDWEDVPEKIKDTFEKIGIPEAERAYLAGAS---- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K+E +K G+ F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 119 ---AQYESEVVYHNMKDEFEKLGIAFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNS 175
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ + Y+EGCTAP
Sbjct: 176 AVWSGGTFIYVPKGVKVDVPLQTYFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYS 235
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 236 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 287
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 288 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 347
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 348 DGGEVNYRGQVTFAKNSASSISHIECDTIIMDEWSKSDTIPFNEIHNSQVSLEHEAKVSK 407
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+E L+Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 408 ISEEQLYYLMSRGLTESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 463
>gi|241890050|ref|ZP_04777348.1| FeS assembly protein SufB [Gemella haemolysans ATCC 10379]
gi|241863672|gb|EER68056.1| FeS assembly protein SufB [Gemella haemolysans ATCC 10379]
Length = 465
Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 196/473 (41%), Positives = 281/473 (59%), Gaps = 18/473 (3%)
Query: 18 QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y+YGF ++ + K KGL ++I++ IS +K EP WMLE+RL A + + M P+W
Sbjct: 10 DYQYGFSDKDVSIFKTDKGLTKEIVKTISERKEEPQWMLEYRLNALKEFYRMPMPTWGG- 68
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
IDF+DL YY P +S D+V E+ T+EKLGIP EQ+ LAG V
Sbjct: 69 DLSEIDFEDLTYYVKPSEKTE-RSWDEVPQEIKNTFEKLGIPEAEQKYLAG-------VS 120
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V ++ ++ G+IF A+ H ++ K+Y S V DN +AALNSAV+
Sbjct: 121 AQYESEVVYHNMHKQFEEKGIIFEDTDTALKNHEEIFKEYFSKAVDFNDNKFAALNSAVW 180
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSF+Y P+ V L YFRIN + GQFERTLII ++ S + Y+EGCTAP +
Sbjct: 181 SGGSFIYCPENVSVEAPLQAYFRINSEKMGQFERTLIIIEKNSSLHYVEGCTAPTYSASS 240
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVE+ +NA +Y+T+QNW +YN VTKR + W G
Sbjct: 241 LHAAVVEIFIKENARFRYTTIQNW-------STNVYNLVTKRAIV-EKNGTMEWVDGNLG 292
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C+L GE + G SIA+++ Q +D+G+KM+HLA T+S +VSK +S
Sbjct: 293 SKLTMKYPACILVGEGASGSTLSIAMASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGG 352
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG + + + SR+ +CD+L++ + TIPY KNS+ +LEHEA SK+S+
Sbjct: 353 KVNYRGWIHFGKNSEGSRSNIECDTLILDEYSTSDTIPYNIVKNSNVSLEHEAKVSKVSE 412
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 413 EQLFYLMSRGLDEGQATEMIVMGFIEPFTKELPMEYAVELNRLISFEMEGSIG 465
>gi|320011449|gb|ADW06299.1| FeS assembly protein SufB [Streptomyces flavogriseus ATCC 33331]
Length = 473
Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 198/490 (40%), Positives = 290/490 (59%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKA-PKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ET + Y++G+ + A +GL+E ++R IS KKNEP+WML+ RL
Sbjct: 1 MTLPTETA-HPELEGLGTYEFGWADSDAAGAAAKRGLSEAVVRDISEKKNEPEWMLKLRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P+W IDFD++ Y+ +S +D+ ++ TY+KLGIP
Sbjct: 60 KGLKLFDKKPMPNWGS-DLSGIDFDNIKYFVRSTEKQA-ESWEDLPEDIKNTYDKLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ L V A ++S V EEL+ GVIFM A+ EHP+L K+Y T
Sbjct: 118 AEKQRLV------AGVAAQYESEVVYHQINEELESQGVIFMDTDTALKEHPELFKEYFGT 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLII DE +
Sbjct: 172 VIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEDA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV Y+EGCTAP + LH+AVVE++ +Y+T+QNW +YN VTKR
Sbjct: 232 YVHYVEGCTAPIYSSDSLHSAVVEIIVKKGGRCRYTTIQNW-------SNNVYNLVTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS +T KYP+ L GE + GE SIA + Q D+G KM+H+A
Sbjct: 285 VAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMA 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK ++ G +YRG + + GA +++ CD+LL+ + T PY++ +
Sbjct: 344 PNTSSNIVSKSVARGGGRTSYRGLIEIGEGAPGAKSNVLCDALLVDTISRSDTYPYVDVR 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEAT SK+S++ LFY + RG+ E A+A+IV GFV + ++LPME+A+E +L
Sbjct: 404 EDDVSMGHEATVSKVSEDQLFYLMSRGMTEFEAMAMIVRGFVEPIAKELPMEYALELNRL 463
Query: 480 IDISLEGSVG 489
I++ +EGSVG
Sbjct: 464 IELQMEGSVG 473
>gi|259501895|ref|ZP_05744797.1| FeS assembly protein SufB [Lactobacillus antri DSM 16041]
gi|259170072|gb|EEW54567.1| FeS assembly protein SufB [Lactobacillus antri DSM 16041]
Length = 469
Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 189/474 (39%), Positives = 280/474 (59%), Gaps = 18/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+QY+YGF +++ V +GL E+++R ISA K+EP WML++RL AY + + P +
Sbjct: 13 EQYEYGFHDDVKPVYSTGRGLTEEVVRQISAAKHEPQWMLDYRLKAYHIYKKLPMPKFGP 72
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+D ++ YY + + DV +L +T+++LG+P E++ LAG
Sbjct: 73 -NLSELDLKNMLYYQK-MTDKKFRDWKDVPEDLKKTFDRLGVPEAERKYLAGSS------ 124
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A ++S V K E K G+IF A+ E+PDL KK+ +V DN +AALN+AV
Sbjct: 125 -AQYESEVVYHNMKNEFAKLGIIFTDTDTALREYPDLFKKWFGKLVQPTDNKFAALNAAV 183
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ GSF+Y+PKGV+ + +YFR+N + TGQFERTLII DEG+ V Y+EGCTAP +
Sbjct: 184 WSGGSFIYVPKGVKTTTPIQSYFRLNAENTGQFERTLIIVDEGASVDYVEGCTAPNYSSD 243
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LHAAVVE+ +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 244 SLHAAVVEVNVCKDAYCRYTTIQNW-------SDNVYSLETKRAAA-AENATMEWVDGNL 295
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 296 GSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAKTG 355
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ YRG V + + S+ +CD++++ + + TIPY E N+ +EHEA SKIS
Sbjct: 356 GSTDYRGTVRFGKYSDGSKAHVECDTIIMDDRSSSDTIPYNEIDNAHVAMEHEAKVSKIS 415
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+E L+Y + RGI E A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 416 EEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 469
>gi|329767026|ref|ZP_08258554.1| hypothetical protein HMPREF0428_00251 [Gemella haemolysans M341]
gi|328837751|gb|EGF87376.1| hypothetical protein HMPREF0428_00251 [Gemella haemolysans M341]
Length = 465
Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats.
Identities = 196/473 (41%), Positives = 281/473 (59%), Gaps = 18/473 (3%)
Query: 18 QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y+YGF ++ + K KGL ++I++ IS +K EP WMLE+RL A + + M P+W
Sbjct: 10 DYQYGFSDKDVSIFKTDKGLTKEIVKTISERKEEPQWMLEYRLNALKEFYRMPMPTWGG- 68
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
IDF+DL YY P +S D+V E+ T+EKLGIP EQ+ LAG V
Sbjct: 69 DLSEIDFEDLTYYVKPSEKTE-RSWDEVPEEIKNTFEKLGIPEAEQKYLAG-------VS 120
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V ++ ++ G+IF A+ H ++ K+Y S V DN +AALNSAV+
Sbjct: 121 AQYESEVVYHNMHKQFEEKGIIFEDTDTALKNHEEIFKEYFSKAVDFNDNKFAALNSAVW 180
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ GSF+Y P+ V L YFRIN + GQFERTLII ++ S + Y+EGCTAP +
Sbjct: 181 SGGSFIYCPENVSVEAPLQAYFRINSEKMGQFERTLIIIEKNSSLHYVEGCTAPTYSASS 240
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVE+ +NA +Y+T+QNW +YN VTKR + W G
Sbjct: 241 LHAAVVEIFIKENARFRYTTIQNW-------STNVYNLVTKRAIV-EKNGTMEWVDGNLG 292
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S +T KYP+C+L GE + G SIA+++ Q +D+G+KM+HLA T+S +VSK +S
Sbjct: 293 SKLTMKYPACILVGEGASGSTLSIAMASEGQVLDAGSKMIHLAPRTSSTVVSKSMSRRGG 352
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG + + + SR+ +CD+L++ + TIPY KNS+ +LEHEA SK+S+
Sbjct: 353 KVNYRGWIHFGKNSEGSRSNIECDTLILDEYSTSDTIPYNIVKNSNVSLEHEAKVSKVSE 412
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E LFY + RG+ E A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 413 EQLFYLMSRGLDEGQATEMIVMGFIEPFTKELPMEYAVELNRLISFEMEGSIG 465
>gi|290969103|ref|ZP_06560633.1| FeS assembly protein SufB [Megasphaera genomosp. type_1 str. 28L]
gi|290780863|gb|EFD93461.1| FeS assembly protein SufB [Megasphaera genomosp. type_1 str. 28L]
Length = 475
Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats.
Identities = 178/492 (36%), Positives = 273/492 (55%), Gaps = 21/492 (4%)
Query: 1 MVAVRE---TVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M +E +K++ + Y F + + K GL DI+R IS KK EP+WML+
Sbjct: 1 MADTKELEEEREKIQSLSDMGNMYNFRKDFKYSYKTDAGLTPDIVREISEKKEEPEWMLQ 60
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
+RL + + + P W +D D++ Y P + + +DV ++ T+++LG
Sbjct: 61 FRLKSLELFYKIDYPDWGP-DISELDMDNIVTYVRPDANMKAN-WNDVPEDIKDTFDRLG 118
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
IP E+ LAG V A +DS V + +E+L K GVI+ A+ ++ D V+++
Sbjct: 119 IPEAEKTSLAG-------VGAQYDSEVVYHSIQEDLVKQGVIYTDFDTALKQYEDNVRRH 171
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+VP D+ +AAL+ AV++ GS+VY+P+GV + L +YFR+N G GQFE TLII +
Sbjct: 172 FMKLVPPTDHKFAALHGAVWSGGSYVYVPEGVDVEIPLQSYFRLNAPGAGQFEHTLIIVE 231
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+ V ++EGC+AP+ + LHA VEL D+A + YST++NW +YN T
Sbjct: 232 KGAKVHFIEGCSAPKYNVANLHAGCVELFIGDDATLTYSTIENW-------SKNMYNLNT 284
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR G I+W GS + YP +L GE + EF + + Q +D+G+K++
Sbjct: 285 KRAIV-GKNGTINWVTGSFGSHTSCLYPMSILNGEGAHCEFTGVTFAGKGQYLDTGSKVI 343
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A TTS I SK IS YRG V V + A S+ C+SL++ + TIP I
Sbjct: 344 HNAPRTTSNINSKSISKDGGVCIYRGSVVVKKNAEGSKATVSCESLMLDEASQSDTIPAI 403
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ +L HEA +ISDE +FY + RG+ E+ A A++V GFV V + LP+E+AVE
Sbjct: 404 VVDTDNIDLGHEAKIGRISDEAIFYLMSRGLSEDEARAMLVRGFVEPVSKALPLEYAVEM 463
Query: 477 QKLIDISLEGSV 488
LI++ L+GS+
Sbjct: 464 NNLINLELKGSM 475
>gi|24379709|ref|NP_721664.1| hypothetical protein SMU.1293c [Streptococcus mutans UA159]
gi|290580292|ref|YP_003484684.1| hypothetical protein SmuNN2025_0766 [Streptococcus mutans NN2025]
gi|24377668|gb|AAN58970.1|AE014964_4 conserved hypothetical protein [Streptococcus mutans UA159]
gi|254997191|dbj|BAH87792.1| hypothetical protein [Streptococcus mutans NN2025]
Length = 460
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 189/475 (39%), Positives = 288/475 (60%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + P W
Sbjct: 3 NRDYAFGFHDDVKPLYSTGKGLTEEVVRDISEIKNEPQWMLDYRLRCLELFYKLPMPKWG 62
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
I+F+D+ YY S +S DDV ++ +T+E+LGIP E++ L+G
Sbjct: 63 P-DLSGINFNDVIYYQK-LSGQPSRSWDDVPDDIKKTFERLGIPNAERQFLSGAV----- 115
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V KEE +K G+IF A+ E+PDLVKKY ++VV ++ +AALN A
Sbjct: 116 --AQYESEVVYHNMKEEFEKMGIIFTDTDTALQEYPDLVKKYFASVVSPAEHKFAALNGA 173
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ G+F+Y+PKGV+C + + TYFRIN + GQFER+L+I +EG+ + Y+EGCTAP
Sbjct: 174 VWSGGTFIYVPKGVQCQIPVQTYFRINGENAGQFERSLMIIEEGASIQYIEGCTAPTYST 233
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LHAA VE++ +A +Y+T+QNW +YN VT+RG + W
Sbjct: 234 NSLHAATVEIIVKRDASFRYTTIQNW-------SDNVYNLVTERGTV-EENGTLEWIDGN 285
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP +L G Q+ S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 286 LGSKVNMKYPCSILNGRQARTSVLSMSFANYGQHLDAGCKVYHNAPRTSSTLISKSVAKD 345
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V+ + +A S++ +CD++L+ + TIP+ E NS +LEHEA SK+
Sbjct: 346 GGKTDYRGSVTFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSDVSLEHEAKVSKV 405
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE LI++S+EGSVG
Sbjct: 406 SEEQLYYIMSRGISEEEATAMIINGFMDPITKELPMEYAVELNALINMSMEGSVG 460
>gi|116512657|ref|YP_811564.1| hypothetical protein LACR_1969 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108311|gb|ABJ73451.1| Iron-regulated ABC transporter membrane component SufB [Lactococcus
lactis subsp. cremoris SK11]
Length = 470
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 197/487 (40%), Positives = 290/487 (59%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + D+++YK+GF N +++ GL E++I IS KNEP+WMLE+RL ++
Sbjct: 1 MTENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIHEISETKNEPEWMLEFRLKSF 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + P W IDF+D+ YY P S +S +DV E+ T+EK+GIP E+
Sbjct: 61 EAFKKLDMPKWGP-DLSGIDFNDIVYYQKP-SAKAARSWEDVPQEIKDTFEKIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V K+E +K G+IF + ++P++ KKY S +VP
Sbjct: 119 SYLAGAS-------AQYESEVVYHNMKDEFEKLGIIFTDADSGLRDYPEIFKKYFSKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ GSFVY+PKGV+C + + YFRIN + +GQFERTLII +EG+ +
Sbjct: 172 PTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQ 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + LHAAVVE+ + ++YST+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYSASSLHAAVVEIFVEEGGYMRYSTIQNW-------SDNVYNLVTKRAAA- 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W GS ++ KYP+ L G + G SIA + Q D+G KM+H A NT
Sbjct: 284 EKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLSIAFAGANQNQDTGAKMIHNAPNT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I+SK I+ YRG+V+ + + S + +CD++L+ + + T+P+ E NS
Sbjct: 344 SSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIHNSQ 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E L+Y + RG+ E+ A +IV GF+ ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISY 463
Query: 483 SLEGSVG 489
S+EGS+G
Sbjct: 464 SMEGSIG 470
>gi|227530415|ref|ZP_03960464.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus vaginalis ATCC 49540]
gi|227349647|gb|EEJ39938.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus vaginalis ATCC 49540]
Length = 467
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 186/477 (38%), Positives = 276/477 (57%), Gaps = 18/477 (3%)
Query: 14 IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
+ Y+YGF +++ + +GL E +R ISA+K+EP WML++RL ++ + M P
Sbjct: 8 LGNQDYQYGFHDDVKPLYSTGRGLTEATVRKISAEKHEPQWMLDYRLESFHTYQKMAMPK 67
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
+ +D +++ YY + + DV EL RT+++LG+P E++ LAG
Sbjct: 68 FGP-DLSGLDLENMLYYQK-MTDKKYRDWKDVPEELKRTFDRLGVPEAERKYLAGSA--- 122
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
A ++S V K++ K G+IF A+ ++PDL KK+ +V DN +AALN
Sbjct: 123 ----AQYESEVVYHNMKQQFAKQGIIFTDTDTALQKYPDLFKKWFGKLVKPADNKFAALN 178
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
AV++ GSF+Y+PKGV+ + YFR+N + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 179 GAVWSGGSFIYVPKGVKVKTPIQAYFRLNAENTGQFERTLIIVDEGASVDYVEGCTAPNY 238
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 239 SSDSLHAAVVEVNVLKDAYCRYTTIQNW-------SKNVYSLETKRAAA-AENATMEWVD 290
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
GS +T KYPS L G+ + G SIA+++ DSG +M+H A NT+S IVSK I+
Sbjct: 291 GNLGSKVTMKYPSVYLNGKGARGTMLSIAVASDHIHQDSGARMIHNAPNTSSSIVSKSIA 350
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
+ YRG + A S+ +CD++++ + + TIP E NS +EHEA S
Sbjct: 351 RTGGSTDYRGNIRFTEKANGSKAHVECDTIIMDDQSSSDTIPINEINNSDVTMEHEAKVS 410
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
KIS+E L+Y + RGI E A +I+ GFV +KLPME+AVE +LI +EGS+G
Sbjct: 411 KISEEKLYYLMSRGISERKATEMIIMGFVEPFTKKLPMEYAVELNRLISFEMEGSIG 467
>gi|269302478|gb|ACZ32578.1| FeS assembly protein SufB [Chlamydophila pneumoniae LPCoLN]
Length = 484
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 276/476 (57%), Positives = 366/476 (76%), Gaps = 3/476 (0%)
Query: 15 DVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ + Y YGF T I+ +GL+E+ I I+A +NEP +++++RL AYR W + +P+WA
Sbjct: 11 EREDYPYGFVTPIESQGLTRGLSEETIEEIAALRNEPQFIIDFRLQAYRHWKQLHEPAWA 70
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
R+ Y I +DD+ Y+++PK L+D DPE+L T++KLGIP+ EQ+ L V+ VA
Sbjct: 71 RLHYGPIAYDDIVYFSSPKQKKPLGRLEDADPEILDTFKKLGIPLDEQKRLLNVEN--VA 128
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
VD VFDSVS+ TTFKE L+K+GVIF + EAI EHP+LVKKYL +VV DNF+AALN+A
Sbjct: 129 VDLVFDSVSIGTTFKEALEKAGVIFCSLGEAIQEHPNLVKKYLGSVVSHRDNFFAALNAA 188
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
VF+DGSFVY+PKGV+CPM++STYFRIN K GQFERTLI+ ++G Y SYLEGCTAP
Sbjct: 189 VFSDGSFVYVPKGVKCPMDISTYFRINNKEAGQFERTLIVVEDGGYASYLEGCTAPAYSS 248
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ-GKGGIYNFVTKRGDCRGMRSKISWTQL 313
NQLHAAVVELVA ++A I+YSTVQNWY GD + GKGGIYNFVTKRG C G RSKISW+Q+
Sbjct: 249 NQLHAAVVELVAHEHAVIRYSTVQNWYAGDKKTGKGGIYNFVTKRGLCAGYRSKISWSQV 308
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
E G+AITWKYPSC+L+G++S GEFYS+A+++G Q D+GTKMLH+ K TTS ++SKGIS+
Sbjct: 309 EVGAAITWKYPSCILKGDESVGEFYSVALTSGKMQADTGTKMLHVGKRTTSTVISKGISS 368
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S NT+R VS+ + A HS N+TQCDS+LIG GA+T P I +NS+ ++EHEATTSK
Sbjct: 369 DESKNTFRSLVSLGKKAEHSSNYTQCDSMLIGKASGAYTDPKIVVENSTSSIEHEATTSK 428
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ ++ L Y RG+ E A++L+++GF RE++++LP+EFA EA KL+ I LE SVG
Sbjct: 429 LREDQLLYLRSRGLSPEEAVSLVIHGFCREIIEQLPLEFAQEASKLLLIKLENSVG 484
>gi|313124436|ref|YP_004034695.1| fe-s cluster assembly ABC transporter permease [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280999|gb|ADQ61718.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 475
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 202/495 (40%), Positives = 292/495 (58%), Gaps = 26/495 (5%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M A E + ++ +D D Y+YGF+ I+ + GL+E+++R ISA KNEPDWML++RL
Sbjct: 1 MTA--EKDETLQALDQD-YQYGFKDEIEPIYTTGTGLSEEVVRQISAAKNEPDWMLDFRL 57
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY+ +L M P++ IDFD L Y+ + + D+V ++ T+EKLG+P
Sbjct: 58 KAYQTYLKMPLPAFGP-DLTKIDFDHLNYFRR-DAKKAVRDWDEVPDKIKETFEKLGVPQ 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG A ++S V KE+L + GV+FM A+ PDLVKKY
Sbjct: 116 AERQYLAGSS-------AQYESEVVYEKIKEDLARQGVLFMSTDAAVQVVPDLVKKYFGK 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+V DN AALNSAV++ G+F+Y+PKGV+ + + +YFRIN +GQFERTLII DEG+
Sbjct: 169 LVKPDDNKMAALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNSGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V+Y+EGCTAP + LHAAVVE+ L +A +Y+T+QNW +Y+ TKR
Sbjct: 229 SVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN---GFQQID--SGTK 354
+ + W GS +T KYPS L G +S G SIA + Q ID +G +
Sbjct: 282 QAL-ENATMEWVDGNLGSKVTMKYPSVYLNGLRSRGTMLSIAFAGCDSNGQGIDSDTGAR 340
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A TTS IVSK + YRG+V + + S +CD++++ + ++TIP
Sbjct: 341 MVHNAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKSASNTIP 400
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E N + ++EHEA SKIS+E L+Y + RGI E A +IV GF+ ++LPME+AV
Sbjct: 401 YNEVLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKELPMEYAV 460
Query: 475 EAQKLIDISLEGSVG 489
E +LI + GS+G
Sbjct: 461 ELNRLIKYQMVGSIG 475
>gi|306833896|ref|ZP_07467020.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
gi|304423897|gb|EFM27039.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus bovis ATCC 700338]
Length = 471
Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 190/475 (40%), Positives = 282/475 (59%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+Y YGF ++ KG+ E+I+R IS KNEPDWMLE+RL + + + P W
Sbjct: 14 NREYDYGFHDDVNPTYSTGKGMTEEIVRNISKVKNEPDWMLEYRLKSLELFHKLPMPDWG 73
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFDD+ Y+ S + DDV ++ +T+E+LGIP E++ L+G
Sbjct: 74 P-DLSGIDFDDVIYFQK-LSDRRANNWDDVPDKIKQTFERLGIPEAERQFLSGAV----- 126
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V K+E KK G+IF A+ E+PDL KKY +V ++ +AALN A
Sbjct: 127 --AQYESEVVYHNMKDEFKKQGIIFTDTDTALQEYPDLFKKYFGKIVSNSEHKFAALNGA 184
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ G+F+Y+PKGV+C + + TYFRIN + GQFER+LII DEG+ + Y+EGCTAP
Sbjct: 185 VWSGGTFIYVPKGVQCDIPVQTYFRINGENAGQFERSLIIVDEGASIQYIEGCTAPNYTT 244
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LHAA VE++ +A +Y+T+QNW +YN VT+RG + W
Sbjct: 245 NSLHAATVEIIVKRDASFRYTTIQNW-------SDNVYNLVTERGTV-EENGMLEWIDGN 296
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP +L G + S+A +N Q +D+G K+ H A +T+S ++SK ++
Sbjct: 297 LGSKVNMKYPCSILNGPHARTSVLSMAFANYGQHLDAGCKVYHNAPHTSSTLISKSVAKD 356
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + + S++ +CD++L+ + + TIP+ E NS+ LEHEA SK+
Sbjct: 357 GGKTDYRGSVYFGKNSGGSKSHIECDTILMDDLSSSDTIPFNEIHNSNVALEHEAKVSKV 416
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ L+Y + RGI EE A A+IVNGF+ + ++L ME+AVE LI +S+EGSVG
Sbjct: 417 SEDQLYYMMSRGISEEEATAMIVNGFMEPITKELRMEYAVELNSLITMSMEGSVG 471
>gi|148544125|ref|YP_001271495.1| FeS assembly protein SufB [Lactobacillus reuteri DSM 20016]
gi|184153496|ref|YP_001841837.1| hypothetical protein LAR_0841 [Lactobacillus reuteri JCM 1112]
gi|227364552|ref|ZP_03848613.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri MM2-3]
gi|325682333|ref|ZP_08161850.1| FeS assembly protein SufB [Lactobacillus reuteri MM4-1A]
gi|148531159|gb|ABQ83158.1| Iron-regulated ABC transporter membrane component SufB
[Lactobacillus reuteri DSM 20016]
gi|183224840|dbj|BAG25357.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070389|gb|EEI08751.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri MM2-3]
gi|324978172|gb|EGC15122.1| FeS assembly protein SufB [Lactobacillus reuteri MM4-1A]
Length = 469
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 190/475 (40%), Positives = 282/475 (59%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
DQY+YGF N++ + +GL E+ +R ISA K+EP WML++RL AY+ + + P +
Sbjct: 12 NDQYEYGFHDNVEPEYSTGRGLTEETVREISAAKHEPKWMLDYRLKAYKIYKELPMPKFG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+D ++ YY + + DDV +L RT+++LG+P E++ LAG
Sbjct: 72 P-DLSELDLKNMLYYQK-MTDKKFRDWDDVPEDLKRTFDRLGVPEAERKYLAGSS----- 124
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V K E +K G+IF A+ E+P+L KK+ +V DN +AALN+A
Sbjct: 125 --AQYESEVVYHNMKNEFEKLGIIFTDTDTALKEYPELFKKWFGKLVQPTDNKFAALNAA 182
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ + +YFR+N + +GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 183 VWSGGSFIYVPKGVKTKTPIQSYFRLNAENSGQFERTLIIVDEGASVDYVEGCTAPNYSS 242
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE+ +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 243 DSLHAAVVEVNVCKDAYCRYTTIQNW-------SDNVYSLETKRAAA-AENATMEWVDGN 294
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 295 LGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAKT 354
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ YRG V + + S+ +CD++++ + + TIPY E N+ +EHEA SKI
Sbjct: 355 GGSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSDTIPYNEIDNAHVAMEHEAKVSKI 414
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E L+Y + RGI E A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 415 SEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 469
>gi|194467986|ref|ZP_03073972.1| FeS assembly protein SufB [Lactobacillus reuteri 100-23]
gi|194452839|gb|EDX41737.1| FeS assembly protein SufB [Lactobacillus reuteri 100-23]
Length = 469
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 189/475 (39%), Positives = 282/475 (59%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
DQY+YGF N++ + +GL E+ +R ISA K+EP WML++RL AY+ + + P +
Sbjct: 12 SDQYEYGFHDNVEPEYSTGRGLTEETVRKISAAKHEPQWMLDYRLKAYKIYKELPMPKFG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+D ++ YY + + D+V +L RT+++LG+P E++ LAG
Sbjct: 72 P-DLSELDLKNMLYYQK-MTDKKFRDWDEVPEDLKRTFDRLGVPEAERKYLAGSS----- 124
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V K E +K G+IF A+ E+P+L KK+ +V DN +AALN+A
Sbjct: 125 --AQYESEVVYHNMKNEFEKLGIIFTDTDTALKEYPELFKKWFGKLVQPTDNKFAALNAA 182
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ + +YFR+N + +GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 183 VWSGGSFIYVPKGVKTKTPIQSYFRLNAENSGQFERTLIIVDEGASVDYVEGCTAPNYSS 242
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE+ +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 243 DSLHAAVVEVNVCKDAYCRYTTIQNW-------SDNVYSLETKRAAA-AENATMEWVDGN 294
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 295 LGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAKT 354
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ YRG V + + S+ +CD++++ + + TIPY E N+ +EHEA SKI
Sbjct: 355 GGSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSDTIPYNEIDNAHVAMEHEAKVSKI 414
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E L+Y + RGI E A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 415 SEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 469
>gi|297622513|ref|YP_003703947.1| FeS assembly protein SufB [Truepera radiovictrix DSM 17093]
gi|297163693|gb|ADI13404.1| FeS assembly protein SufB [Truepera radiovictrix DSM 17093]
Length = 469
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 200/471 (42%), Positives = 284/471 (60%), Gaps = 17/471 (3%)
Query: 20 KYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
+Y F ++ KGLN +I IS KNEP WML++RL A P W
Sbjct: 15 QYEFSLPENYFFRSEKGLNRRVIEQISYHKNEPQWMLDFRLRALEIAEKKGRPKWGP-DL 73
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
A++FDD+Y+Y P+ G S DDV E+ TY +LGIP EQ+ LAG V A
Sbjct: 74 SALNFDDIYFYIRPQDRKGTNSWDDVPEEVRETYRRLGIPEAEQKALAG-------VGAQ 126
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
++S V + KEE +K GVIF+ + E+P+L ++Y +TVVP DN++AA+NSAV++
Sbjct: 127 YESEMVYHSLKEEWEKKGVIFVDTDTGLQEYPELFREYFATVVPPEDNYFAAVNSAVWSG 186
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSFVY+P GV + L YF IN + GQFERTLII +EGS Y+EGCTAP + + H
Sbjct: 187 GSFVYVPAGVEIEVPLQAYFLINAQSMGQFERTLIIGEEGSKFHYIEGCTAPTYNSDSFH 246
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ V+E++ + ++++YST+QNW +YN VT+R + + W GS
Sbjct: 247 SGVIEIICKEGSQVRYSTIQNW-------SHNVYNLVTQRALVH-KDASMGWLDGNLGSK 298
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+T KYPSC L E + GE SIA + Q D+G KM+H A T+S +VSK IS +
Sbjct: 299 VTMKYPSCYLLEEGAKGEVLSIAFAGKGQHQDAGAKMIHAAPYTSSSVVSKSISKDGGRS 358
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+YRG V +H GA ++R+ +CD+LL+ T PYIE + ++ HEAT SK++DE
Sbjct: 359 SYRGLVEIHEGATNARSNVECDALLLDERAKTDTYPYIEINEKTAHVGHEATVSKMNDEQ 418
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+FY RG+ E+ A ALIV GF+ V ++LP+E+AVE +LI++ +EGSVG
Sbjct: 419 IFYLQSRGLEEDEAAALIVRGFLEPVAKELPLEYAVELNRLIELEMEGSVG 469
>gi|297172096|gb|ADI23078.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [uncultured gamma proteobacterium
HF0770_07M15]
Length = 437
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 296/444 (66%), Positives = 354/444 (79%), Gaps = 10/444 (2%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M ET+++ +YK+GF T+I+ D P GL+ED++R ISA+KNEP+WMLEWRL
Sbjct: 1 MSVDTETINR---FVAQEYKWGFYTDIETDTLPPGLDEDVVRHISARKNEPEWMLEWRLK 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP--KSIVGPQSLDDVDPELLRTYEKLGIP 118
A+R W TMK+P W +++Y ID+ + YY+AP K P+SL +VDP+LL TYEKLG+P
Sbjct: 58 AFRHWQTMKEPHWPQVQYEPIDYQAVSYYSAPGAKDKDRPKSLAEVDPKLLETYEKLGVP 117
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+ E+E LAG VAVDAVFDSVSV TT KEEL K GVIF SEA+ E+P+L+KK+L
Sbjct: 118 LHERERLAG-----VAVDAVFDSVSVGTTHKEELAKHGVIFCSFSEAVQEYPELIKKHLG 172
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
TVVP DNF+A LNSAVF+DGSFVYIPKGVRCP+ELSTYFRIN TGQFERTLI+ADEG
Sbjct: 173 TVVPYTDNFFATLNSAVFSDGSFVYIPKGVRCPLELSTYFRINAAETGQFERTLIVADEG 232
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S+VSYLEGCTAP RDENQLHAAVVELVAL +AEIKYSTVQNWYPGD G GGIYNFVTKR
Sbjct: 233 SHVSYLEGCTAPMRDENQLHAAVVELVALGDAEIKYSTVQNWYPGDEDGNGGIYNFVTKR 292
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G C+G RSKI WTQ+ETGSAITWKYPS +LRG+ S GEFYS+A++N QQ D+GTKM+HL
Sbjct: 293 GICKGARSKICWTQVETGSAITWKYPSVILRGDDSVGEFYSVALANLAQQADTGTKMIHL 352
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KNT S ++SKGISAG N+YRG V + + A ++RN+TQCDSLLIG+ CGAHT PYIE
Sbjct: 353 GKNTRSTVISKGISAGKGQNSYRGLVQMGKNATNARNYTQCDSLLIGSRCGAHTFPYIEV 412
Query: 419 KNSSCNLEHEATTSKISDEHLFYC 442
KN S +EHEATTSKI D+ +FYC
Sbjct: 413 KNPSAQVEHEATTSKIGDDQIFYC 436
>gi|116514675|ref|YP_813581.1| Fe-S cluster assembly ABC-type transport system, permease
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093990|gb|ABJ59143.1| Iron-regulated ABC transporter membrane component SufB
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325125658|gb|ADY84988.1| ABC transporter component, iron regulated [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
Length = 475
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 199/495 (40%), Positives = 291/495 (58%), Gaps = 26/495 (5%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M A E + ++ +D D Y+YGF+ I+ + GL+E+++R ISA K EPDWML++RL
Sbjct: 1 MTA--EKDETLQALDQD-YQYGFKDEIEPIYTTGTGLSEEVVRQISAAKKEPDWMLDFRL 57
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY+ +L M P++ IDFD L Y+ + + D+V ++ T+EKLG+P
Sbjct: 58 KAYQTYLKMPLPAFGP-DLTKIDFDHLNYFRR-DAKKAVRDWDEVPDKIKETFEKLGVPQ 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG A ++S V KE+L + GV+FM A+ PDLVKKY
Sbjct: 116 AERQYLAGSS-------AQYESEVVYEKIKEDLARQGVLFMSTDAAVQVVPDLVKKYFGK 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+V DN +ALNSAV++ G+F+Y+PKGV+ + + +YFRIN +GQFERTLII DEG+
Sbjct: 169 LVKPDDNKMSALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNSGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V+Y+EGCTAP + LHAAVVE+ L +A +Y+T+QNW +Y+ TKR
Sbjct: 229 SVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN---GFQQID--SGTK 354
+ + W GS +T KYPS L G ++ G SIA + Q ID +G +
Sbjct: 282 QAL-ENATMEWVDGNLGSKVTMKYPSVYLNGRRARGTMLSIAFAGCDSNGQGIDSDTGAR 340
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A TTS IVSK + YRG+V + + S +CD++++ + ++TIP
Sbjct: 341 MVHNAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKSASNTIP 400
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E N + ++EHEA SKIS+E L+Y + RGI E A +IV GF+ ++LPME+AV
Sbjct: 401 YNEVLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKELPMEYAV 460
Query: 475 EAQKLIDISLEGSVG 489
E +LI + GS+G
Sbjct: 461 ELNRLIKYQMVGSIG 475
>gi|325685495|gb|EGD27589.1| FeS assembly protein SufB [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 475
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 201/495 (40%), Positives = 291/495 (58%), Gaps = 26/495 (5%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M A E + ++ +D D Y+YGF+ I+ + GL+E+++R IS KNEPDWML++RL
Sbjct: 1 MTA--EKDETLQALDQD-YQYGFKDEIEPIYTTGTGLSEEVVRQISVAKNEPDWMLDFRL 57
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY+ +L M P++ IDFD L Y+ + + D+V ++ T+EKLG+P
Sbjct: 58 KAYQTYLKMPLPAFGP-DLTKIDFDHLNYFRR-DAKKAVRDWDEVPDKIKETFEKLGVPQ 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG A ++S V KE+L + GV+FM A+ PDLVKKY
Sbjct: 116 AERQYLAGSS-------AQYESEVVYEKIKEDLARQGVLFMSTDAAVQVVPDLVKKYFGK 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+V DN AALNSAV++ G+F+Y+PKGV+ + + +YFRIN +GQFERTLII DEG+
Sbjct: 169 LVKPDDNKMAALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNSGQFERTLIIVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V+Y+EGCTAP + LHAAVVE+ L +A +Y+T+QNW +Y+ TKR
Sbjct: 229 SVNYVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN---GFQQID--SGTK 354
+ + W GS +T KYPS L G +S G SIA + Q ID +G +
Sbjct: 282 QAL-ENATMEWVDGNLGSKVTMKYPSVYLNGRRSRGTMLSIAFAGCDSNGQGIDSDTGAR 340
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A TTS IVSK + YRG+V + + S +CD++++ + ++TIP
Sbjct: 341 MVHNAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKSASNTIP 400
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E N + ++EHEA SKIS+E L+Y + RGI E A +IV GF+ ++LPME+AV
Sbjct: 401 YNEVLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKELPMEYAV 460
Query: 475 EAQKLIDISLEGSVG 489
E +LI + GS+G
Sbjct: 461 ELNRLIKYQMVGSIG 475
>gi|262282965|ref|ZP_06060732.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
gi|262261217|gb|EEY79916.1| FeS assembly protein SufB [Streptococcus sp. 2_1_36FAA]
Length = 460
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 281/473 (59%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +I + KGL E ++R ISA K EP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDIAPLYSTGKGLTEAVVREISAIKKEPQWMLDYRLRSLELFNKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I F+D+ YY +S DDV E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFEDVIYYQKLSGQPA-RSWDDVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE +K G+IF A+ E+P+LVK+Y TVV ++ +AALN AV+
Sbjct: 116 AQYESEVVYHNMKEEFEKLGIIFTDTDTAVQEYPELVKQYFGTVVSNAEHKFAALNGAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVHCQIPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTTNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAATVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGTV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|15618602|ref|NP_224888.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae CWL029]
gi|15836224|ref|NP_300748.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae J138]
gi|16752348|ref|NP_444606.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae AR39]
gi|33242050|ref|NP_876991.1| cysteine desulfurase activator complex subunit SufB [Chlamydophila
pneumoniae TW-183]
gi|4376994|gb|AAD18831.1| ABC Transporter [Chlamydophila pneumoniae CWL029]
gi|7188992|gb|AAF37945.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979064|dbj|BAA98899.1| ABC transporter [Chlamydophila pneumoniae J138]
gi|33236560|gb|AAP98648.1| putative ABC transporter [Chlamydophila pneumoniae TW-183]
Length = 484
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 276/476 (57%), Positives = 366/476 (76%), Gaps = 3/476 (0%)
Query: 15 DVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ + Y YGF T I+ +GL+E+ I I+A +NEP +++++RL AYR W + +P+WA
Sbjct: 11 EREDYPYGFVTPIESQGLTRGLSEETIEEIAALRNEPQFIIDFRLQAYRYWKQLHEPAWA 70
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
R+ Y I +DD+ Y+++PK L+D DPE+L T++KLGIP+ EQ+ L V+ VA
Sbjct: 71 RLHYGPIAYDDIVYFSSPKQKKPLGRLEDADPEILDTFKKLGIPLDEQKRLLNVEN--VA 128
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
VD VFDSVS+ TTFKE L+K+GVIF + EAI EHP+LVKKYL +VV DNF+AALN+A
Sbjct: 129 VDLVFDSVSIGTTFKEALEKAGVIFCSLGEAIQEHPNLVKKYLGSVVSHRDNFFAALNAA 188
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
VF+DGSFVY+PKGV+CPM++STYFRIN K GQFERTLI+ ++G Y SYLEGCTAP
Sbjct: 189 VFSDGSFVYVPKGVKCPMDISTYFRINNKEAGQFERTLIVVEDGGYASYLEGCTAPAYSS 248
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ-GKGGIYNFVTKRGDCRGMRSKISWTQL 313
NQLHAAVVELVA ++A I+YSTVQNWY GD + GKGGIYNFVTKRG C G RSKISW+Q+
Sbjct: 249 NQLHAAVVELVAHEHAVIRYSTVQNWYAGDKKTGKGGIYNFVTKRGLCAGYRSKISWSQV 308
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
E G+AITWKYPSC+L+G++S GEFYS+A+++G Q D+GTKMLH+ K TTS ++SKGIS+
Sbjct: 309 EVGAAITWKYPSCILKGDESVGEFYSVALTSGKMQADTGTKMLHVGKRTTSTVISKGISS 368
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S NT+R VS+ + A HS N+TQCDS+LIG GA+T P I +NS+ ++EHEATTSK
Sbjct: 369 DESKNTFRSLVSLGKKAEHSSNYTQCDSMLIGKASGAYTDPKIVVENSTSSIEHEATTSK 428
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ ++ L Y RG+ E A++L+++GF RE++++LP+EFA EA KL+ I LE SVG
Sbjct: 429 LREDQLLYLRSRGLSPEEAVSLVIHGFCREIIEQLPLEFAQEASKLLLIKLENSVG 484
>gi|104774553|ref|YP_619533.1| hypothetical protein Ldb1817 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423634|emb|CAI98586.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
Length = 475
Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats.
Identities = 197/492 (40%), Positives = 289/492 (58%), Gaps = 24/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
E + ++ +D D Y+YGF+ I+ + GL+E+++R ISA K EPDWML++RL AY
Sbjct: 2 TVEKDETLQALDQD-YQYGFKDEIEPIYTTGTGLSEEVVRQISAAKKEPDWMLDFRLKAY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ +L M P++ IDFD L Y+ + + D+V ++ T+EKLG+P E+
Sbjct: 61 QTYLKMPLPAFGP-DLTKIDFDHLNYFRR-DAKKAVRDWDEVPDKIKETFEKLGVPQAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A ++S V KE+L + GV+FM A+ PDLVKKY +V
Sbjct: 119 QYLAGSS-------AQYESEVVYEKIKEDLARQGVLFMSTDAAVQVVPDLVKKYFGKLVK 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN +ALNSAV++ G+F+Y+PKGV+ + + +YFRIN +GQFERTLII DEG+ V+
Sbjct: 172 PDDNKMSALNSAVWSGGTFIYVPKGVQAKVPIQSYFRINAGNSGQFERTLIIVDEGASVN 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + LHAAVVE+ L +A +Y+T+QNW +Y+ TKR
Sbjct: 232 YVEGCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKRAQAL 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN---GFQQID--SGTKMLH 357
+ + W GS +T KYPS L G ++ G SIA + Q ID +G +M+H
Sbjct: 285 -ENATMEWVDGNLGSKVTMKYPSVYLNGRRARGTMLSIAFAGCDSNGQGIDSDTGARMVH 343
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A TTS IVSK + YRG+V + + S +CD++++ + ++TIPY E
Sbjct: 344 NAPQTTSSIVSKSLCKDGGRVDYRGQVRFNPDSDGSLAHVECDTIIMDDKSASNTIPYNE 403
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
N + ++EHEA SKIS+E L+Y + RGI E A +IV GF+ ++LPME+AVE
Sbjct: 404 VLNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIVMGFLEPFTKELPMEYAVELN 463
Query: 478 KLIDISLEGSVG 489
+LI + GS+G
Sbjct: 464 RLIKYQMVGSIG 475
>gi|322385758|ref|ZP_08059402.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
gi|321270496|gb|EFX53412.1| FeS assembly protein SufB [Streptococcus cristatus ATCC 51100]
Length = 460
Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats.
Identities = 185/473 (39%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +I+ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDIKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFDDIIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYYNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENVGQFERSLMIIEEGGSIQYIEGCTAPTYTTNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|20809016|ref|NP_624187.1| membrane components of an uncharacterized iron-regulated ABC-type
transporter SufB [Thermoanaerobacter tengcongensis MB4]
gi|20517686|gb|AAM25791.1| predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Thermoanaerobacter
tengcongensis MB4]
Length = 467
Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats.
Identities = 176/484 (36%), Positives = 279/484 (57%), Gaps = 21/484 (4%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+++R+ID Y + ++ + + KGL+++++ IS +K EP WM E+RL A +
Sbjct: 3 KEEIREIDFSIY--NIKDEVEYEFQTGKGLSKEVVLEISEQKGEPSWMREFRLKALEIYE 60
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
M P+W + +D + + Y P + ++V E+ RT+E+LGIP E++ LA
Sbjct: 61 KMPMPTWG-VDLSQLDINSIVAYIRPSARKKTS-WEEVPEEIRRTFERLGIPEAEKKALA 118
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGD 185
G V A +DS + KE L + GVIF + A+ ++PD++++Y V D
Sbjct: 119 G-------VGAQYDSEVIYHNMKESLARQGVIFEDMDTALKKYPDIIREYFMTKNVLPTD 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ +AAL++AV++ G+FVY+P+GV+ + L YFR+N G+GQFE TLIIAD GS V ++E
Sbjct: 172 HKFAALHAAVWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADRGSEVHFIE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP + LHA VEL + A I YST++NW YN TKR
Sbjct: 232 GCSAPLYSVSNLHAGCVELFVKEGARIIYSTIENW-------SKNTYNLNTKRAIV-ERD 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ W GS T YP+ +L G+ + E+ SI + Q +D+G KM+HLA T+S+
Sbjct: 284 GMVEWISGSFGSKKTMLYPASVLVGKGAKAEYTSITFAAKGQHLDTGAKMIHLAPYTSSK 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I++K IS +TYRG + V A + C+ L++ + + TIP I+ +N + ++
Sbjct: 344 ILAKSISKDGGISTYRGLLKVGPEAEGVKASVTCEGLMLDDISKSDTIPVIDIENDNVDI 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEA +IS+E ++Y + RG+ EE A A+IV GFV + + LP+E+AVE +LI + LE
Sbjct: 404 GHEAKVGRISEEQIYYLMSRGLNEEDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELE 463
Query: 486 GSVG 489
G++G
Sbjct: 464 GAIG 467
>gi|227544255|ref|ZP_03974304.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri CF48-3A]
gi|300910228|ref|ZP_07127688.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri SD2112]
gi|227185768|gb|EEI65839.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri CF48-3A]
gi|300892876|gb|EFK86236.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus reuteri SD2112]
Length = 469
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 189/475 (39%), Positives = 282/475 (59%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+QY+YGF N++ + +GL E+ +R ISA K+EP WML++RL AY+ + + P +
Sbjct: 12 NEQYEYGFHDNVEPEYSTGRGLTEETVRKISAAKHEPKWMLDYRLKAYKIYKELPMPKFG 71
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
+D ++ YY + + DDV +L RT+++LG+P E++ LAG
Sbjct: 72 P-DLSELDLKNMLYYQK-MTDKKFRDWDDVPEDLKRTFDRLGVPEAERKYLAGSS----- 124
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V K E +K G+IF A+ E+P+L KK+ +V DN +AALN+A
Sbjct: 125 --AQYESEVVYHNMKNEFEKLGIIFTDTDTALKEYPELFKKWFGKLVQPTDNKFAALNAA 182
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ + +YFR+N + +GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 183 VWSGGSFIYVPKGVKTKTPIQSYFRLNAENSGQFERTLIIVDEGASVDYVEGCTAPNYSS 242
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE+ +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 243 DSLHAAVVEVNVCKDAYCRYTTIQNW-------SDNVYSLETKRAAA-AENATMEWVDGN 294
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT+S IVSK I+
Sbjct: 295 LGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARMIHNAKNTSSSIVSKSIAKT 354
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ YRG V + + S+ +CD++++ + + TIPY E N+ +EHEA SKI
Sbjct: 355 GGSTDYRGTVRFGKHSDGSKAHVECDTIIMDDQSSSDTIPYNEIDNAHVAMEHEAKVSKI 414
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E L+Y + RGI E A +I+ GFV ++LPME+AVE +LI +EGS+G
Sbjct: 415 SEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVELNRLISFEMEGSIG 469
>gi|324994544|gb|EGC26457.1| FeS assembly protein SufB [Streptococcus sanguinis SK678]
gi|325694421|gb|EGD36330.1| FeS assembly protein SufB [Streptococcus sanguinis SK150]
gi|332360794|gb|EGJ38600.1| FeS assembly protein SufB [Streptococcus sanguinis SK49]
Length = 460
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-DEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|254520075|ref|ZP_05132131.1| FeS assembly protein SufB [Clostridium sp. 7_2_43FAA]
gi|226913824|gb|EEH99025.1| FeS assembly protein SufB [Clostridium sp. 7_2_43FAA]
Length = 469
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 187/485 (38%), Positives = 284/485 (58%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K D+D+ Y + + D KA KGL ++I+ IS +K EP+WM E+RL +
Sbjct: 2 EIKKKTYVDDMDRGVYDVKNEDRFDFKADKGLTKEIVETISKEKEEPEWMREFRLKSLDI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ +K P+W +D +++ Y PKS + +S ++V ++ +T++ LGIP E++
Sbjct: 62 YNKIKLPTWGP-SLDELDMNNIVTYVRPKSKLN-ESWEEVPEDIKKTFDLLGIPEAEKKS 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + +E+L K GVI+ + A+ E+ D+V++Y V
Sbjct: 120 LAG-------VGAQYDSEVVYHSIREDLVKQGVIYTDMETAVKEYEDIVREYFMKCVAPS 172
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII +EG+ + ++
Sbjct: 173 DHKFAALHGAVWSGGSFVYVPKGVNVDIPLQSYFRLNSPGAGQFEHTLIIVEEGATLHFI 232
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL + A ++YST++NW + N TKR
Sbjct: 233 EGCSAPKYNMTNLHAGCVELFVKEGATLRYSTIENW-------SKNMLNLNTKRAIV-EK 284
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+I W GS I+ YP +L+GE + EF ++ + Q +D+G K++H A NT+S
Sbjct: 285 NGRIEWVSGSFGSKISMLYPMSILKGEGARAEFTGVSFAGKGQNLDTGAKIIHAAPNTSS 344
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I SK IS TYRG V V+ A +S++ C+SL++ N + TIP I+ N
Sbjct: 345 TINSKSISKNGGAATYRGVVRVNANAYNSKSVVSCESLMLDNLSKSDTIPVIDLMNDDVE 404
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA KISDE +FY + RGI EE A ++IV GFV + ++LP+E+AVE LI + L
Sbjct: 405 IGHEAKIGKISDEAIFYLMSRGISEEEAKSMIVRGFVEPISKELPLEYAVEMNNLIKLEL 464
Query: 485 EGSVG 489
EGS+G
Sbjct: 465 EGSIG 469
>gi|328946222|gb|EGG40366.1| FeS assembly protein SufB [Streptococcus sanguinis SK1087]
Length = 460
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 284/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E+ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKRFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|325689619|gb|EGD31623.1| FeS assembly protein SufB [Streptococcus sanguinis SK115]
Length = 460
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 284/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E+ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKRFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGVV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|157150820|ref|YP_001450667.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075614|gb|ABV10297.1| FeS assembly protein SufB [Streptococcus gordonii str. Challis
substr. CH1]
Length = 460
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 280/473 (59%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +I + KGL E ++R ISA K EP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDIAPLYSTGKGLTEAVVREISAIKKEPQWMLDYRLRSLELFNKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I F+D+ YY +S DDV E+ RT+++LGIP E++ L+G
Sbjct: 64 DLSGIRFEDVIYYQKLSGQPA-RSWDDVPEEIKRTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE +K G++F A+ E+P+LVK+Y TVV ++ +AALN AV+
Sbjct: 116 AQYESEVVYHNMKEEFEKLGIVFTDTDTAVQEYPELVKQYFGTVVSNAEHKFAALNGAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVHCQIPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTTNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAATVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGTV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGENSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|324992816|gb|EGC24736.1| FeS assembly protein SufB [Streptococcus sanguinis SK405]
gi|327462121|gb|EGF08448.1| FeS assembly protein SufB [Streptococcus sanguinis SK1]
gi|327489803|gb|EGF21593.1| FeS assembly protein SufB [Streptococcus sanguinis SK1058]
Length = 460
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 286/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL+E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLSEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|125718088|ref|YP_001035221.1| hypothetical protein SSA_1269 [Streptococcus sanguinis SK36]
gi|323351489|ref|ZP_08087143.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|125498005|gb|ABN44671.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
gi|322121975|gb|EFX93701.1| FeS assembly protein SufB [Streptococcus sanguinis VMC66]
gi|324991068|gb|EGC23002.1| FeS assembly protein SufB [Streptococcus sanguinis SK353]
gi|327474420|gb|EGF19826.1| FeS assembly protein SufB [Streptococcus sanguinis SK408]
gi|332361122|gb|EGJ38926.1| FeS assembly protein SufB [Streptococcus sanguinis SK1056]
Length = 460
Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|327460269|gb|EGF06606.1| FeS assembly protein SufB [Streptococcus sanguinis SK1057]
Length = 460
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-DEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITRELPMEYAVELNQLINMSMEGSVG 460
>gi|325695853|gb|EGD37744.1| FeS assembly protein SufB [Streptococcus sanguinis SK160]
Length = 460
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 183/473 (38%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA +E++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANIEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-DEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|325687549|gb|EGD29570.1| FeS assembly protein SufB [Streptococcus sanguinis SK72]
Length = 460
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 183/473 (38%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + +GL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGRGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E++ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKQFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-DEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|332366810|gb|EGJ44551.1| FeS assembly protein SufB [Streptococcus sanguinis SK1059]
Length = 460
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 284/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E+ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKHFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-DEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|223984309|ref|ZP_03634453.1| hypothetical protein HOLDEFILI_01747 [Holdemania filiformis DSM
12042]
gi|223963742|gb|EEF68110.1| hypothetical protein HOLDEFILI_01747 [Holdemania filiformis DSM
12042]
Length = 469
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 203/490 (41%), Positives = 291/490 (59%), Gaps = 22/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M +ETV K + D Y+YGF ++ V K KGL + + IS K EP WML++RL
Sbjct: 1 MSREQETVLKTQ----DDYQYGFHDEDVSVFKTKKGLTRETVIEISKIKKEPQWMLDFRL 56
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY ++ M W ++FDD YY P + D+V + T+++LGIP
Sbjct: 57 KAYDAFVKMPIQDWGP-DLSTLNFDDYTYYIRPSNKKETD-WDEVPETIKDTFDRLGIPE 114
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LAGV T ++S +V +E+++ GVIF+ A+ + P+LVK+Y +T
Sbjct: 115 AEQKFLAGVNT-------QYESETVYHNMLKEVEEKGVIFLDTDSALQQVPELVKEYFAT 167
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
VVP DN +AALNSAV++ GSF+Y+PKGV+ L +YFRIN + GQFERTLII DEG+
Sbjct: 168 VVPYTDNKFAALNSAVWSGGSFIYVPKGVKLEKPLQSYFRINSEQMGQFERTLIIVDEGA 227
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP ++ LHAAVVE++ + + +YSTVQNW I N VTKR
Sbjct: 228 DVHYVEGCTAPTYSKDSLHAAVVEIIIKEGGKCRYSTVQNW-------SDNIINLVTKRA 280
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS KYP+CLL GE + G SIA+++ Q D+G KM+HLA
Sbjct: 281 KVDAHGA-MEWIDGNIGSQTNMKYPACLLVGEYARGMCISIAVASRHQVQDAGAKMIHLA 339
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S I+SK +S YRG V A ++R+ +CD+L++ + TIP S
Sbjct: 340 PHTSSTIISKSVSRLGGEVNYRGLVQHGPKAEYARSKVECDTLILDEQSRSDTIPTNVSS 399
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ + +EHEAT SKIS+E LFY + RG+ + A +I+ GF+ ++LPME+AVE +L
Sbjct: 400 SRTSTIEHEATVSKISEEQLFYLMSRGLTKSQATEMIIMGFLEPFTRELPMEYAVELNQL 459
Query: 480 IDISLEGSVG 489
+ + +EGSVG
Sbjct: 460 LKLDMEGSVG 469
>gi|71892138|ref|YP_277870.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|71796244|gb|AAZ40995.1| putative transport protein associated with Fe-S cluster assembly
[Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 498
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 267/486 (54%), Positives = 350/486 (72%), Gaps = 21/486 (4%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
YK GF T + ++ KG+N+DII IS K+ EP WMLE+RL Y W MK+P W +
Sbjct: 21 SYYKEGFFTKLNNEELKKGINKDIIYAISQKRLEPKWMLEFRLAGYNAWCNMKEPHWLKG 80
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQ-------------SLDDVDPELLRTYEKLGIPIREQE 123
Y ++++ Y++AP + + E+ +T+ KLGIP+ E+
Sbjct: 81 NYQKLNYNSYSYFSAPACATTQKTHKVQKNTNTLLNKSKYLTTEVEQTFNKLGIPVHEK- 139
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
VAVDA+FDSVSV TTF+ L K G+IF +AI ++PDLV++YL TVV
Sbjct: 140 -------GNVAVDAIFDSVSVSTTFRNTLLKKGIIFCSFHDAIQDYPDLVRQYLGTVVSF 192
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNF+AALN+AV +DG+FVYIPK VRCPMELSTYFR+N K TGQFERT++IAD GSYVSY
Sbjct: 193 KDNFFAALNAAVVSDGTFVYIPKNVRCPMELSTYFRMNSKKTGQFERTILIADTGSYVSY 252
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP + QLHAAVVE++ L +A++KYSTVQNW+ G+ +GGI NFVTKR C G
Sbjct: 253 IEGCSAPMHNNYQLHAAVVEVIVLKDAQVKYSTVQNWFSGNQNSQGGILNFVTKRALCSG 312
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+K+SWTQ E+GSAITWKYPS +L+G+ S GEF+S+A++NG QQ D+GTKM+H+ +NT
Sbjct: 313 ENAKMSWTQSESGSAITWKYPSVILKGKNSIGEFFSVAVTNGTQQADTGTKMIHIGENTR 372
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGI+ G S NTYRG V + + A++SRNFTQCDS+LIG C +HT P IES N+
Sbjct: 373 STIISKGIALGNSQNTYRGLVKIMKTASNSRNFTQCDSMLIGKKCSSHTFPVIESHNNHS 432
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
LEHEATTS+ISD LFYC QRGI E+ AI++IVNGF +++ KLP+EF+VEAQKL++I+
Sbjct: 433 QLEHEATTSRISDNQLFYCRQRGINEDDAISMIVNGFCKDIFSKLPLEFSVEAQKLLEIT 492
Query: 484 LEGSVG 489
LE SVG
Sbjct: 493 LEHSVG 498
>gi|327470927|gb|EGF16383.1| FeS assembly protein SufB [Streptococcus sanguinis SK330]
Length = 460
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 184/473 (38%), Positives = 285/473 (60%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + + P +
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLQLFHKLPMPDFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY S +S D+V E+ +T+++LGIP E+ L+G
Sbjct: 64 DLSGIRFDDVIYYQK-LSGDRARSWDEVPEEIKKTFDRLGIPEAEKRFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|28378189|ref|NP_785081.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum WCFS1]
gi|254556396|ref|YP_003062813.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum JDM1]
gi|300767149|ref|ZP_07077061.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308180369|ref|YP_003924497.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28271024|emb|CAD63929.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum WCFS1]
gi|254045323|gb|ACT62116.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum JDM1]
gi|300494968|gb|EFK30124.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308045860|gb|ADN98403.1| ABC transporter component, iron regulated (putative) [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 468
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 186/487 (38%), Positives = 284/487 (58%), Gaps = 20/487 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E D V+ Y+YGF +++ +GL E +R ISA K+EP WML++RL AY
Sbjct: 1 MSEVPDVVKN--DRDYEYGFHDDVKPAYSTGRGLTEATVREISAAKHEPQWMLDYRLNAY 58
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+L M P + +D D+ YY + + +V +L RT+++LG+P E+
Sbjct: 59 HEYLKMPMPKFGP-DLTKLDLKDMLYYQK-MTDKKFRDWKEVPADLKRTFDRLGVPEAER 116
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A ++S V +++ +K G+IF A+ ++P+L KK+ +V
Sbjct: 117 KYLAGSS-------AQYESEVVYHNMRKDFEKLGIIFTDTDTALHDYPELFKKWFGKLVK 169
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN +AALN+AV++ GSF+Y+PKGV+ + +YFR+N + +GQFERTLII ++G+ V
Sbjct: 170 PTDNKFAALNAAVWSGGSFIYVPKGVQTKTPIQSYFRLNAENSGQFERTLIIVEDGASVD 229
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP + LHAAVVE+ NA +Y+T+QNW +Y+ TKR
Sbjct: 230 YVEGCTAPNYSSDSLHAAVVEVNVEPNAYCRYTTIQNW-------SDNVYSLETKRAAA- 281
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W GS +T KYPS L GE + G SIA+++ DSG +M+H AKNT
Sbjct: 282 AENATMEWVDGNLGSKVTMKYPSVYLNGEGARGTMLSIAVASNGIHQDSGARMIHNAKNT 341
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ YRG V + + S+ +CD++++ + ++TIPY E +++
Sbjct: 342 SSSIVSKSIAKTGGATDYRGTVRFAKHSDGSKAHVECDTIIMDDQSSSNTIPYNEIDSAN 401
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA SKIS+E L+Y + RGI E A +I+ GFV ++LPME+AVE +LI
Sbjct: 402 VAMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKQLPMEYAVELNRLISF 461
Query: 483 SLEGSVG 489
+EGS+G
Sbjct: 462 EMEGSIG 468
>gi|42519068|ref|NP_964998.1| hypothetical protein LJ1142 [Lactobacillus johnsonii NCC 533]
gi|41583355|gb|AAS08964.1| hypothetical protein LJ_1142 [Lactobacillus johnsonii NCC 533]
Length = 467
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 190/487 (39%), Positives = 288/487 (59%), Gaps = 21/487 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + D V+ + Y++GF N++ +GL E+++R ISA+K+EP WML++RL A+
Sbjct: 1 MTKAEDIVKD---EDYQFGFHDNVEPKFSTGRGLTEEVVRQISAEKHEPKWMLDYRLKAF 57
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M P + +D D++ YY + + DV ++ T+E+LG+P E+
Sbjct: 58 HIYEKMPMPDFGP-DLSGLDLDNMLYYQK-MTDKKYRDWKDVPQDIKDTFERLGVPQAER 115
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A ++S V KE+ K G+IF A+ E+PDL KKY +VP
Sbjct: 116 KYLAGSA-------AQYESEMVYHKMKEQFDKLGIIFTDTDTALQEYPDLFKKYFGKLVP 168
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ N ++ALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII DE +++
Sbjct: 169 IDSNKFSALNCAVWSGGTFIYVPKGVQVPTPVQAYFRLNAENSGQFERTLIIVDEDAHLD 228
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAPQ + LHAAVVE+ LDNA +Y+T+QNW +Y+ TKR
Sbjct: 229 YVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNW-------SDNVYSLETKRAVA- 280
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT
Sbjct: 281 GKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNT 340
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G + YRG V + + S+ +CD++++ + + TIP +NS+
Sbjct: 341 SSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDMSSSDTIPTNAIENSN 400
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEAT SKIS++ L+Y RGIPE A +I+ GFV ++LPME+AVE +LI
Sbjct: 401 VAMEHEATVSKISEDQLYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVELNRLISF 460
Query: 483 SLEGSVG 489
+EG++G
Sbjct: 461 QMEGAIG 467
>gi|227889937|ref|ZP_04007742.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus johnsonii ATCC 33200]
gi|227849381|gb|EEJ59467.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus johnsonii ATCC 33200]
Length = 467
Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats.
Identities = 190/487 (39%), Positives = 288/487 (59%), Gaps = 21/487 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + D V+ + Y++GF N++ +GL E+++R ISA+K+EP WML++RL A+
Sbjct: 1 MTKAEDIVKD---EDYQFGFHDNVEPKFSTGRGLTEEVVRQISAEKHEPKWMLDYRLKAF 57
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M P + +D D++ YY + + DV ++ T+E+LG+P E+
Sbjct: 58 HIYEKMPMPDFGP-DLSRLDLDNMLYYQK-MTDKKYRDWKDVPQDIKDTFERLGVPQAER 115
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A ++S V KE+ K G+IF A+ E+PDL KKY +VP
Sbjct: 116 KYLAGSA-------AQYESEMVYHKMKEQFDKLGIIFTDTDTALQEYPDLFKKYFGKLVP 168
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ N ++ALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII DE +++
Sbjct: 169 IDSNKFSALNCAVWSGGTFIYVPKGVQVPTPVQAYFRLNAENSGQFERTLIIVDEDAHLD 228
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAPQ + LHAAVVE+ LDNA +Y+T+QNW +Y+ TKR
Sbjct: 229 YVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNW-------SDNVYSLETKRAVA- 280
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT
Sbjct: 281 GKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNT 340
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G + YRG V + + S+ +CD++++ + + TIP +NS+
Sbjct: 341 SSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDMSSSDTIPTNAIENSN 400
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEAT SKIS++ L+Y RGIPE A +I+ GFV ++LPME+AVE +LI
Sbjct: 401 VAMEHEATVSKISEDQLYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVELNRLISF 460
Query: 483 SLEGSVG 489
+EG++G
Sbjct: 461 QMEGAIG 467
>gi|332359610|gb|EGJ37427.1| FeS assembly protein SufB [Streptococcus sanguinis SK355]
Length = 460
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 183/473 (38%), Positives = 282/473 (59%), Gaps = 18/473 (3%)
Query: 18 QYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y +GF +++ + KGL E+++R IS KNEP WML++RL + + + PS+
Sbjct: 5 DYAFGFHDDVKPLFSTGKGLTEEVVREISEIKNEPQWMLDYRLRSLELFHKLPMPSFGP- 63
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
I FDD+ YY D+V E+ +T+++LGIP E+ L+G
Sbjct: 64 DLSGIRFDDVIYYQKLSGDRAHS-WDEVPEEIKKTFDRLGIPEAEKRFLSGAV------- 115
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
A ++S V KEE K G+IF A+ E+PDLVK+Y TV+ ++ ++ALNSAV+
Sbjct: 116 AQYESEVVYHNMKEEFAKLGIIFTDTDTAVQEYPDLVKQYFGTVISNAEHKFSALNSAVW 175
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ G+F+Y+PK V+C + + TYFRIN + GQFER+L+I +EG + Y+EGCTAP N
Sbjct: 176 SGGTFIYVPKNVQCQVPVQTYFRINGENAGQFERSLMIIEEGGSIQYIEGCTAPTYTSNS 235
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAA VE++ +A +Y+T+QNW +YN VT+RG + W G
Sbjct: 236 LHAANVEIIVKKDAFFRYTTIQNW-------SDNVYNLVTERGIV-EEGGTLEWIDGNLG 287
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
S + KYP +L G + S++ +N Q +D+G K+ H A T+S ++SK ++
Sbjct: 288 SKVNMKYPCSILNGRNARTSVLSMSFANYGQHLDAGCKVFHNAPKTSSTLISKSVAKDGG 347
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
YRG+V + +A S++ +CD++L+ + TIP+ E NS+ LEHEA SK+S+
Sbjct: 348 KTDYRGQVRFGKNSAGSKSHIECDTILMDGESSSDTIPFNEIHNSNVALEHEAKVSKVSE 407
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ L+Y + RGI EE A A+I+NGF+ + ++LPME+AVE +LI++S+EGSVG
Sbjct: 408 DQLYYLMSRGISEEEATAMIINGFMEPITKELPMEYAVELNQLINMSMEGSVG 460
>gi|150016722|ref|YP_001308976.1| FeS assembly protein SufB [Clostridium beijerinckii NCIMB 8052]
gi|149903187|gb|ABR34020.1| FeS assembly protein SufB [Clostridium beijerinckii NCIMB 8052]
Length = 469
Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats.
Identities = 189/485 (38%), Positives = 278/485 (57%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K ++D+ Y + K+ KGL +DII IS +KNE WM ++RL +
Sbjct: 2 ENKKKTYIDEMDRGIYDVKNEDSFSFKSEKGLTKDIIETISEEKNEAKWMRDFRLRSLEI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ +K P+W +D D++ Y PKS + S D+V ++ +T++ LGIP E++
Sbjct: 62 YNKLKLPTWGP-SLDELDMDNIVTYVRPKSSL-VGSWDEVPEDIKKTFDLLGIPEAEKKS 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + KE+L K GVI+ + A+ EH DLVK+Y V
Sbjct: 120 LAG-------VGAQYDSEVVYHSIKEDLVKQGVIYTDMETALREHEDLVKEYFMKCVTPN 172
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ + AL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII DEG+ + ++
Sbjct: 173 DHKFVALHGAVWSGGSFVYVPKGVNVDIPLQSYFRLNSPGAGQFEHTLIIVDEGAKLHFI 232
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ LHA VEL + A ++YST++NW + N TKR
Sbjct: 233 EGCSAPKYSVTNLHAGCVELYVKEGATLRYSTIENW-------SKNMLNLNTKRAIV-EK 284
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS I+ YP +L+GE + EF ++ + Q +D+G K++H A NT+S
Sbjct: 285 DGTIEWVSGSFGSQISMLYPMSILKGEGARAEFTGVSFAGKGQNLDTGAKVIHAAPNTSS 344
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I SK IS TYRG + V+ A +S++ C+SL++ N + TIP I+ N
Sbjct: 345 TINSKSISRNGGKATYRGVLKVNSNAYNSKSMVSCESLMLDNKSKSDTIPVIDLLNDDVE 404
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA KISD+ +FY + RGI E+ A ++IV GFV + ++LP+E+AVE LI+I L
Sbjct: 405 IGHEAKIGKISDDSIFYLMTRGISEDEAKSMIVRGFVEPISKELPLEYAVEMNNLINIEL 464
Query: 485 EGSVG 489
EGS+G
Sbjct: 465 EGSIG 469
>gi|320528271|ref|ZP_08029433.1| FeS assembly protein SufB [Solobacterium moorei F0204]
gi|320131185|gb|EFW23753.1| FeS assembly protein SufB [Solobacterium moorei F0204]
Length = 475
Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats.
Identities = 200/475 (42%), Positives = 286/475 (60%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
D YKYGF +++ KG++E+++R ISA K+EP+WM E R+ AY ++ P W
Sbjct: 18 QDDYKYGFHDDVKSIIDTGKGISEEVVRQISAYKHEPEWMTEKRVEAYHIFMKKPMPKWG 77
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDF D YY S +S ++V E+ T+EKLGIP E++ LAGV T
Sbjct: 78 P-DLSEIDFQDFTYY-RKVSQETEKSWEEVPEEVKNTFEKLGIPEAERKFLAGVTT---- 131
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
++S +V +E+++ GVIF+ I A+ E P L K+Y +V VGDN +ALNSA
Sbjct: 132 ---QYESEAVYHNMLKEVEEKGVIFLDIDSALREQPVLFKQYFGKIVSVGDNKLSALNSA 188
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ L +YFRIN + GQFERT+II D+G+ SY+EGCTAPQ +
Sbjct: 189 VWSGGSFIYVPKGVKLEKPLQSYFRINSESMGQFERTIIIVDDGAECSYVEGCTAPQYSK 248
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE+ NA+ +YS+VQNW G I N VTKR + W
Sbjct: 249 DSLHAAVVEVYVGKNAKCRYSSVQNW-------SGNILNLVTKRARVDA-GGTMEWIDGN 300
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS I+ KYPSC+L GE + G SI + + Q D+G+KM+H A NT S I+SK +S
Sbjct: 301 IGSRISMKYPSCILAGEGATGLCISIGVGSKGQFQDTGSKMIHAAPNTRSSIISKSVSRN 360
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+R +V A +S+ +CD+L++ N + TIP + N+S +EHEA SKI
Sbjct: 361 GGVTNFRDEVHFTPAARNSKAHIECDTLILDNISKSDTIPTNSNMNNSSTIEHEAKVSKI 420
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ EE A +I+ GF+ ++LPME+AVE +L+ + + GSVG
Sbjct: 421 SEDQLFYLMSRGLSEEQATEMIIMGFLEPFTRELPMEYAVELNQLMKLDMSGSVG 475
>gi|312865338|ref|ZP_07725566.1| FeS assembly protein SufB [Streptococcus downei F0415]
gi|311099449|gb|EFQ57665.1| FeS assembly protein SufB [Streptococcus downei F0415]
Length = 470
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 205/487 (42%), Positives = 288/487 (59%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ +T +K ++ +Q F + V KGL+E+++R ISAKKNEPDWML++RL A
Sbjct: 1 MTDTPNKDIELGQNQQDTNFHVEMNPVFTTGKGLSEEVVRQISAKKNEPDWMLDFRLKAL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + M P W ++FDD+ YY + DDV ++ T+E+LG+P EQ
Sbjct: 61 KNFNDMSMPKWGP-DLSELNFDDVVYYQKVSETPA-RDWDDVPDKVKETFERLGVPEAEQ 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S +V K+E +K G+IF I + E+PDL K+Y + +VP
Sbjct: 119 SYLAGTV-------AQYESEAVYHNMKKEFEKEGIIFTDIDSGLQEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+YIPKGV + L Y RIN + TGQFERTLII DEG+ +
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYIPKGVEVEVPLQLYLRINNENTGQFERTLIIVDEGASMH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAAVVE+ AL+ A I+Y+T+QNW +YN VTKR
Sbjct: 232 YVEGCTAPTYTTNSLHAAVVEVFALEGAHIRYTTIQNW-------SDNVYNLVTKR-ATA 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W GS T KYP+ L GE + G +IA + Q D+G KM+H A +T
Sbjct: 284 KKNATVEWIDGNIGSKTTMKYPAIYLDGEGATGTMLTIAFAGAGQDQDTGAKMIHSAPHT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I+SK ++ G YRG+V+ A HS + +CD++L+ + + T+P+ E NSS
Sbjct: 344 KSSIISKSLAKGGGRVDYRGQVTFKEEAKHSLSHVECDTILMDDLSSSDTVPFNEIHNSS 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LEHEA SKIS+E LFY + RG+ E A IV GF+ ++LPME+AVE +LI
Sbjct: 404 VALEHEAKVSKISEEQLFYLMSRGLTESEATEKIVMGFIEPFAKELPMEYAVELNQLISF 463
Query: 483 SLEGSVG 489
+EGS+G
Sbjct: 464 EMEGSIG 470
>gi|110005496|emb|CAK99818.1| iron-sulfur cluster assembly transmembrane protein [Spiroplasma
citri]
Length = 470
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 202/490 (41%), Positives = 300/490 (61%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M +++ + +++I YKYGF +I KGLNE II IS KNEPDWM E+RL
Sbjct: 1 MPKLKQEKE-IKEI--SSYKYGFNDGDISYYNTGKGLNETIINEISDHKNEPDWMREYRL 57
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+Y +L +K+PSW +DFD+ YY P + + D+V ++ +T+++LG+P
Sbjct: 58 QSYFNFLKIKNPSWGP-NLEFMDFDEYIYYIKPTEHIATK-WDEVPEKIKKTFDRLGLPE 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+E LAG++ A +DS V + +E+++ G+IF+ A+ EHP+L KKY T
Sbjct: 116 GEREYLAGIK-------AQYDSEPVYGSMLKEVEEKGIIFLDCDTALREHPELFKKYFGT 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN YAALN AV++ GSF+YIPKGV+ L YFRIN + +GQFERTLII D+ +
Sbjct: 169 LVPNTDNKYAALNGAVWSGGSFIYIPKGVKLEKPLQAYFRINYQNSGQFERTLIIVDDDA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ Y+EGCTAP + LHAA+VE+ N++++Y+TVQNW + N VTKR
Sbjct: 229 ELHYIEGCTAPIYARDSLHAAIVEIFVGKNSKMRYTTVQNW-------SDNVLNLVTKRS 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ W GS I KYPS +L+G S G+ SIA++ D+G+KM+HL
Sbjct: 282 IV-DENGQMEWIDGNIGSKINMKYPSVILKGNNSKGQCISIAVAKENVIQDAGSKMIHLG 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
KNT+S+I+SK ++ YRG V + A +S+ +CD+L++ + TIP +
Sbjct: 341 KNTSSKIISKLMTFNGGTANYRGLVHIGPKAQYSKARVECDTLILDGKSHSDTIPQNKVY 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+ +EHEAT SK+S+E LFY RG+ E+ A+ +I+ GF+ ++LPME+AVE +L
Sbjct: 401 NNESQIEHEATVSKVSEEQLFYLQSRGLSEQEALEMIIMGFLEPFTRELPMEYAVELNQL 460
Query: 480 IDISLEGSVG 489
I + +EGSVG
Sbjct: 461 IKMDMEGSVG 470
>gi|81428718|ref|YP_395718.1| iron/sulfur ABC transporter [Lactobacillus sakei subsp. sakei 23K]
gi|78610360|emb|CAI55410.1| Putative ABC-type system involved in Fe-S cluster assembly (sufB
homolog) [Lactobacillus sakei subsp. sakei 23K]
Length = 467
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 185/474 (39%), Positives = 280/474 (59%), Gaps = 18/474 (3%)
Query: 17 DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+ Y YGF +++ V +GL ED++R IS +K EP WML++RL ++ + + P +
Sbjct: 11 ENYDYGFSDDVEPVFSTGRGLTEDVVRAISHEKKEPQWMLDFRLKSFHAYEKIPMPDFGP 70
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
+D + + YY + +DV ++ T+++LG+P E++ LAG
Sbjct: 71 -DLSGLDLEHMLYYQKATDKQ-YRDWEDVPDKIKDTFDRLGVPEAERKYLAGSS------ 122
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
A ++S V ++E +K G+IF + A+ E+PD+VK+Y ST+V DN ++ALNSAV
Sbjct: 123 -AQYESEVVYHNMRDEFEKLGIIFTDMDTALREYPDIVKEYFSTLVKPTDNKFSALNSAV 181
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
++ G+F+Y+PKGVR + + +YFRIN + +GQFERTLI+ DEG+ V+Y+EGCTAP +
Sbjct: 182 WSGGTFIYVPKGVRTDIPIQSYFRINAENSGQFERTLIVVDEGASVNYVEGCTAPSYSSD 241
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LHAAVVE+ +A +Y+T+QNW +Y+ TKR + + W
Sbjct: 242 SLHAAVVEVFVKRDAYCRYTTIQNW-------SKNVYSLETKRAQAM-ENATMEWVDGNL 293
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS +T KYPS L GE + G SIA++ DSG +M+H A NT+S IVSK I+
Sbjct: 294 GSKMTMKYPSVYLDGEGARGTMLSIAVAGEGVDQDSGARMIHAAPNTSSSIVSKSIAKDG 353
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
YRG V R + S +CD++++ + + TIPY N + ++EHEA SKIS
Sbjct: 354 GAVDYRGTVRFERDSDGSFAHVECDTIIMDDKSSSDTIPYNTILNGNVSMEHEAKVSKIS 413
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+E L+Y + RGI E A +I+ GFV ++LPME+AVE +LI +EGSVG
Sbjct: 414 EEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 467
>gi|159485362|ref|XP_001700714.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158272056|gb|EDO97863.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 511
Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats.
Identities = 232/488 (47%), Positives = 306/488 (62%), Gaps = 28/488 (5%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+ + ++KI YKYGF+T I+ D PKGLNED++R ISAKK EP+WMLE+RL A
Sbjct: 52 AQISDEKRDIQKILDRPYKYGFKTIIESDTFPKGLNEDVVRAISAKKGEPEWMLEFRLKA 111
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+R+WLTM++P W+ YP ID+ D+ YY+ PK +SLD VDPELL+T+EKLGIP+ E
Sbjct: 112 FRKWLTMEEPKWSDNAYPEIDYQDVSYYSEPKFKEKLESLDQVDPELLKTFEKLGIPLNE 171
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q+ L+ VAVDAVFDSVS+ TTFK +L K GVIF ISEA+ ++P++V+KY+ +VV
Sbjct: 172 QKRLS-----NVAVDAVFDSVSIATTFKADLLKHGVIFCSISEALKDYPEMVRKYMGSVV 226
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P +SA ++ + + +R
Sbjct: 227 P-------RASSAQWSCPPTSASTPARPASLSAPSLWRRRAP----------------TC 263
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
P+ A + + Y GD GKGGIYNFVTKRG C
Sbjct: 264 RTWRAAPPPRTTTTSCTPRWWSCTATKTQRSNTAPYRTGYAGDVNGKGGIYNFVTKRGLC 323
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G SKISWTQ+ETGS+ITWKYPS +L G+ S GEFYS+A++N QQ D+GTKM+H+ +N
Sbjct: 324 SGSHSKISWTQVETGSSITWKYPSVVLAGDNSVGEFYSVALTNNRQQADTGTKMIHVGRN 383
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T SRIVSKGISAG S N YRG V V A +RNF+QCDS+LIG+N A+T PYI+ +
Sbjct: 384 TRSRIVSKGISAGNSRNCYRGLVQVQPSARGARNFSQCDSMLIGDNAAANTYPYIQVREP 443
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
S +EHEA+TSKIS++ LFY QRGI E A+ I++GF REV +LP+EFA E +L+
Sbjct: 444 SAVVEHEASTSKISEDQLFYFQQRGIDPEKAVGAIISGFCREVFNELPLEFAAEVNELMS 503
Query: 482 ISLEGSVG 489
+ LEG+VG
Sbjct: 504 LKLEGTVG 511
>gi|323706196|ref|ZP_08117764.1| FeS assembly protein SufB [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534489|gb|EGB24272.1| FeS assembly protein SufB [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 467
Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats.
Identities = 178/488 (36%), Positives = 279/488 (57%), Gaps = 23/488 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+++T+ V ID +Y + + K KGL++ I+ IS +KNEP WM ++RL +
Sbjct: 1 MKKTI--VNDIDFSRY--NIKNEVRYSYKTEKGLSKKIVEEISERKNEPKWMRDFRLKSL 56
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ P+W + +D + + Y +P + + S D+V ++ T+EKLGIP E+
Sbjct: 57 EIYENKPMPTWG-VDLSQLDINSIVAYLSPDAKLK-NSWDEVPEDIRNTFEKLGIPEAEK 114
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVV 181
+ L+G V A +DS V + K+ L K GVIF + A+ ++PD++K+Y V
Sbjct: 115 KALSG-------VGAQYDSEVVYHSIKDNLAKQGVIFEDMDTALKKYPDVIKEYFMTKNV 167
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
D+ +AAL+ A+++ G+FVY+P+ V+ + L YFR+N GTGQFE TLIIAD GS V
Sbjct: 168 TPNDHKFAALHGAIWSGGTFVYVPENVKVEVPLQAYFRMNAPGTGQFEHTLIIADRGSEV 227
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+APQ + LHA VEL + A + YST++NW YN TKR
Sbjct: 228 RFIEGCSAPQYAVSNLHAGCVELFVKEGARLIYSTIENW-------SKNTYNLNTKRALV 280
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
I W GS T YP+ +LRG+ + E+ + + Q +D+G+KM+HLA
Sbjct: 281 -DKDGVIEWISGSFGSHKTMLYPASVLRGKGAKSEYTGVTFAAKGQHLDTGSKMIHLAPY 339
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S++++K IS YRG + + A ++ QC+ L+I + T+P IE N
Sbjct: 340 TSSKVLAKSISKDGGITNYRGLLRIGPNAEGAKASVQCEGLMIDEISRSDTMPIIEVLND 399
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ ++ HEA +ISDE +FY + RG+ E+ A ++IV GFV V + LP+E+AVE +LI
Sbjct: 400 NVDIGHEAKVGRISDEQIFYLMTRGLSEDEARSMIVRGFVEPVAKSLPLEYAVELNRLIK 459
Query: 482 ISLEGSVG 489
+ LEG++G
Sbjct: 460 LELEGTIG 467
>gi|304318028|ref|YP_003853173.1| FeS assembly protein SufB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779530|gb|ADL70089.1| FeS assembly protein SufB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 467
Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 177/488 (36%), Positives = 279/488 (57%), Gaps = 23/488 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+++T+ V ID +Y + + K KG+++ I+ IS +KNEP WM ++RL +
Sbjct: 1 MKKTI--VNDIDFSRY--NIKNEVRYSYKTEKGISKKIVEEISERKNEPKWMRDFRLKSL 56
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + P+W + +D + + Y +P + + S D+V ++ T+EKLGIP E+
Sbjct: 57 EIYESKPMPTWG-VDLSQLDINSIVAYLSPDTKMK-NSWDEVPEDIRNTFEKLGIPEAEK 114
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVV 181
+ L+G V A +DS V + K+ L K GVIF + A+ ++PD++K+Y V
Sbjct: 115 KALSG-------VGAQYDSEVVYHSIKDNLAKQGVIFEDMDTALKKYPDIIKEYFMTKNV 167
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
D+ +AAL+ A+++ G+FVY+P+ V+ + L YFR+N GTGQFE TLIIAD GS V
Sbjct: 168 TPNDHKFAALHGAIWSGGTFVYVPENVKVEVPLQAYFRMNAPGTGQFEHTLIIADRGSEV 227
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+APQ + LHA VEL + A + YST++NW YN TKR
Sbjct: 228 RFIEGCSAPQYAVSNLHAGCVELFVKEGARLIYSTIENW-------SKNTYNLNTKRALV 280
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
I W GS T YP +LRG+ + E+ + + Q +D+G+KM+HLA
Sbjct: 281 -DKDGVIEWISGSFGSHKTMLYPCSVLRGKGAKSEYTGVTFAAKGQHLDTGSKMIHLAPY 339
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S++++K IS YRG + + A ++ QC+ L+I + T+P IE N
Sbjct: 340 TSSKVLAKSISKDGGITNYRGLLKIGPNAEGAKASVQCEGLMIDEISRSDTMPIIEVLND 399
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ ++ HEA +ISDE +FY + RG+ E+ A ++IV GFV V + LP+E+AVE +LI
Sbjct: 400 NVDIGHEAKVGRISDEQIFYLMTRGLSEDEARSMIVRGFVEPVAKSLPLEYAVELNRLIK 459
Query: 482 ISLEGSVG 489
+ LEG++G
Sbjct: 460 LELEGTIG 467
>gi|161833794|ref|YP_001597990.1| FeS assembly protein SufB [Candidatus Sulcia muelleri GWSS]
gi|152206284|gb|ABS30594.1| FeS assembly protein SufB [Candidatus Sulcia muelleri GWSS]
Length = 474
Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 294/486 (60%), Positives = 371/486 (76%), Gaps = 12/486 (2%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + + + + YKYGF T I+ +K PKG+NEDII IS KKNEP WML+ RL +Y+
Sbjct: 1 MIKKKNIIYYFNNYDYKYGFYTKIESEKIPKGINEDIITKISKKKNEPYWMLKIRLKSYK 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W M P WA I Y DF+++ YY+A K + ++D +LL T+ ++
Sbjct: 61 IWKNMIPPKWANISYKIPDFNNISYYSAIKKNKFIK--KEIDNKLLDTF---------KK 109
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
+ ++ SK+A+D + DSVSV TTFK+ L + G+IF PIS+AI ++PDL+KKY+ +VP+
Sbjct: 110 LNLKLKKSKIALDIIMDSVSVTTTFKKILSEKGIIFCPISKAIKKYPDLIKKYIGKIVPI 169
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNFY+ALNSAVF+DGSF YIPK VRCP+ELSTYFRINE G GQFERTL+IAD+ SYVSY
Sbjct: 170 KDNFYSALNSAVFSDGSFCYIPKNVRCPVELSTYFRINESGIGQFERTLLIADKNSYVSY 229
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQR ENQLHAAVVEL+AL+ AEIKYSTVQNW+PGD G GG+ NFVTKRG C
Sbjct: 230 LEGCTAPQRKENQLHAAVVELIALEGAEIKYSTVQNWFPGDKNGIGGVLNFVTKRGLCEN 289
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A + FQQ D+GTKM+HL KNT
Sbjct: 290 K-SKISWTQIETGSAITWKYPSCILKGNDSIGEFYSVAFTKNFQQSDTGTKMIHLGKNTK 348
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG+S N+YRG V++ A +SRNF+QCDSLLIGN C AHT P+++ KN+S
Sbjct: 349 STIISKGISAGYSKNSYRGLVNISYKATNSRNFSQCDSLLIGNTCSAHTFPFLKGKNNSS 408
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ +FYC QRGI E AI+LIV GF +E+L +LPMEFA+EA+KL++I
Sbjct: 409 KVEHEATTSKIGEDQIFYCNQRGINLEKAISLIVTGFSKEILDRLPMEFAIEARKLLEIK 468
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 469 LEGSVG 474
>gi|319760492|ref|YP_004124430.1| FeS cluster assembly protein sufB [Candidatus Blochmannia vafer
str. BVAF]
gi|318039206|gb|ADV33756.1| FeS cluster assembly protein sufB [Candidatus Blochmannia vafer
str. BVAF]
Length = 499
Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 274/486 (56%), Positives = 358/486 (73%), Gaps = 22/486 (4%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YK GF T +Q ++ KG+NE++IR IS K+ EP WML++RL Y W MK+P W +
Sbjct: 22 NYKEGFFTTLQSEEFNKGINENVIRAISKKRLEPAWMLKFRLSGYHAWKNMKEPHWLKGH 81
Query: 78 YPAIDFDDLYYYAAP-------------KSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
Y +D++ YY+AP + ++ E+ +T+ KLGIP+ ++
Sbjct: 82 YDKLDYNAYSYYSAPICTANNQNNKQKNDPVNTSDKSKFLNKEVEKTFNKLGIPLNDE-- 139
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
+VA+DA+FDSVSV TT+++ L K G+IF +++AI ++P LV+KYL TVV
Sbjct: 140 ------GQVAIDAIFDSVSVSTTYRQTLLKKGIIFCSLNDAIHDYPHLVQKYLGTVVSFN 193
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DNF+AALN+AV +DG+F+YIPK VRCPMELSTYFRIN K TGQFERT++IAD GSYVSY+
Sbjct: 194 DNFFAALNAAVMSDGTFIYIPKNVRCPMELSTYFRINSKITGQFERTILIADIGSYVSYI 253
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRG 303
EGC+AP + QLHAAVVE++ L NA++KYSTVQNW+ G+ K GI NFVTKR C
Sbjct: 254 EGCSAPAHNNYQLHAAVVEVIVLKNAQVKYSTVQNWFSGNTKNSKNGILNFVTKRALCAE 313
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SK+SWTQ E+GSAITWKYPS +L+G + GEF+S+AI+NGFQQ D+GTKM+HL +NT
Sbjct: 314 ENSKMSWTQSESGSAITWKYPSIILKGNNAVGEFFSVAITNGFQQADTGTKMIHLGENTR 373
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGIS G S NTYRG V + A H+RNFTQCDS+LIGN CGAHT PYIES N++
Sbjct: 374 STIISKGISVGNSQNTYRGLVKIMPTAFHARNFTQCDSMLIGNKCGAHTFPYIESHNNTA 433
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
LEHEATTSKI+D+ LFYC QRGI E+ AI++IVNGF +E+L +LP+EF+VEA+KL++I+
Sbjct: 434 QLEHEATTSKINDDQLFYCRQRGITEDNAISMIVNGFCKEILSELPLEFSVEARKLLEIT 493
Query: 484 LEGSVG 489
LE SVG
Sbjct: 494 LEHSVG 499
>gi|329667393|gb|AEB93341.1| putative ABC transporter [Lactobacillus johnsonii DPC 6026]
Length = 467
Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats.
Identities = 190/487 (39%), Positives = 288/487 (59%), Gaps = 21/487 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + D V+ + Y++GF N++ +GL E+++R ISA+K+EP WML++RL A+
Sbjct: 1 MTKAEDIVKD---EDYQFGFHDNVEPKFSTGRGLTEEVVRQISAEKHEPKWMLDYRLKAF 57
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M P + +D D++ YY + + DV ++ T+E+LG+P E+
Sbjct: 58 HIYEKMPIPDFGP-DLSGLDLDNMLYYQK-MTDKKYRDWKDVPQDIKDTFERLGVPQAER 115
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A ++S V KE+ K G+IF A+ E+PDL KKY +VP
Sbjct: 116 KYLAGSA-------AQYESEMVYHKMKEQFDKLGIIFTDTDTALQEYPDLFKKYFGKLVP 168
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ N ++ALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII DE +++
Sbjct: 169 IDSNKFSALNCAVWSGGTFIYVPKGVQVPTPVQAYFRLNAENSGQFERTLIIVDEDAHLD 228
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAPQ + LHAAVVE+ LDNA +Y+T+QNW +Y+ TKR
Sbjct: 229 YVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNW-------SDNVYSLETKRAVA- 280
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT
Sbjct: 281 GKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNT 340
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G + YRG V + + S+ +CD++++ + + TIP +NS+
Sbjct: 341 SSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDMSSSDTIPTNAIENSN 400
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEAT SKIS++ L+Y RGIPE A +I+ GFV ++LPME+AVE +LI
Sbjct: 401 VAMEHEATVSKISEDQLYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVELNRLISF 460
Query: 483 SLEGSVG 489
+EG++G
Sbjct: 461 QMEGAIG 467
>gi|169836721|ref|ZP_02869909.1| hypothetical protein cdivTM_06387 [candidate division TM7
single-cell isolate TM7a]
Length = 473
Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 185/485 (38%), Positives = 282/485 (58%), Gaps = 17/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E K D+++ Y + K KGL +II+ IS +KNEP+WM E+RL A
Sbjct: 5 ENRKKTYIADIERGVYDIKDEEHYRYKVEKGLTPEIIKKISERKNEPEWMREFRLKALEV 64
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ + W +D +D+ +Y P S ++ DDV + T+++LGIP E++
Sbjct: 65 YNSKPMTDWGP-DLSDLDMNDIVHYLEPDSAPMNENWDDVPSYIRDTFDRLGIPEAEKQS 123
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + +EL++ GVI+ I AI ++ D++K+Y T++ V
Sbjct: 124 LAG-------VGAQYDSEVVYHSVHKELEEQGVIYTDIETAIVKYGDMLKEYFMTLITVN 176
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSF+Y+PKGV+ M L +YFR+N GQFE TLII DEG+ + ++
Sbjct: 177 DHKFAALHGAVWSGGSFIYVPKGVKVKMPLQSYFRLNAPEAGQFEHTLIIVDEGADLHFI 236
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ +N LHA VEL A ++YST++NW +YN TKR
Sbjct: 237 EGCSAPKYQKNALHAGAVELFVRKGARLRYSTIENW-------SRNMYNLNTKRALV-EE 288
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS ++ YP +L+G++S EF + + Q +D+G K++H KNT+S
Sbjct: 289 DGVIEWVSGSFGSRVSMLYPMSILKGDRSRCEFTGVTFAAAGQYLDTGCKIIHQGKNTSS 348
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG + V A +R+ +C+SL++ N + TIP I+ N S +
Sbjct: 349 TVHSKSISKNGGTAFYRGLLKVLPEATGTRSTVECESLMLDNESTSDTIPIIDINNDSVD 408
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA +ISDE +FY + RGI E+ A A+IV GFV + ++LP+E+AVE KLI++ L
Sbjct: 409 IGHEAKIGRISDEAIFYLMSRGISEDEAKAMIVRGFVEPISKELPLEYAVELNKLIELEL 468
Query: 485 EGSVG 489
EG++G
Sbjct: 469 EGTIG 473
>gi|330444073|ref|YP_004377059.1| FeS assembly protein SufB [Chlamydophila pecorum E58]
gi|328807183|gb|AEB41356.1| FeS assembly protein SufB [Chlamydophila pecorum E58]
Length = 476
Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 288/476 (60%), Positives = 372/476 (78%), Gaps = 3/476 (0%)
Query: 15 DVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YGF T I+ + +GL+E+ I ISA++NEP ++ +RL AYR W M+ P+WA
Sbjct: 3 EEREYPYGFTTPIESEAVVRGLSEETIEQISARRNEPSYITNFRLKAYRYWKEMQSPAWA 62
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
R++ I++D++ Y++APK L+D DPE+L T++KLG+PI EQ+ L VQ VA
Sbjct: 63 RVQMDPINYDEMVYFSAPKQKKPIGRLEDADPEILETFKKLGLPIDEQKRLLNVQN--VA 120
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
VD VFDSVS+ TTFKE L ++GV+F +SEAI E P L++KYL +VV DN++AALN+A
Sbjct: 121 VDFVFDSVSLGTTFKEALDEAGVVFCSLSEAIQEFPRLIRKYLGSVVSYRDNYFAALNAA 180
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
VF+DGSFVY+PKGVRCPM++STYFRIN+K GQFERTLII +EG +VSYLEGCTAP
Sbjct: 181 VFSDGSFVYVPKGVRCPMDISTYFRINDKEAGQFERTLIIVEEGGFVSYLEGCTAPAFSS 240
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+QLHAAVVELVA +AEI+YSTVQNWY GD GKGGIYN VTKRG C G+RSKISW+Q+
Sbjct: 241 HQLHAAVVELVAKSHAEIRYSTVQNWYSGDRKTGKGGIYNLVTKRGLCAGVRSKISWSQV 300
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
E G+AITWKYPSC+LRGE+S GEFYSI+++NG Q D+GTKM+H+ KNTTS IVSKGISA
Sbjct: 301 EVGAAITWKYPSCILRGEESVGEFYSISLTNGKMQADTGTKMIHVGKNTTSTIVSKGISA 360
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
FS+NT+R VSV A+HS N+TQCDS+LIG +CGA+T P IE NS+ ++EHEATTSK
Sbjct: 361 EFSHNTFRSLVSVGERASHSCNYTQCDSMLIGKHCGAYTDPRIEVHNSTSSIEHEATTSK 420
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ D+ L Y RG+ EAA++L+V+GF +E+++KLP+EFA EA KL+ I LE SVG
Sbjct: 421 LRDDQLLYLRSRGLDSEAAMSLVVHGFCKEIIEKLPLEFAQEALKLLYIKLENSVG 476
>gi|238854812|ref|ZP_04645142.1| FeS assembly protein SufB [Lactobacillus jensenii 269-3]
gi|260664043|ref|ZP_05864896.1| FeS assembly protein SufB [Lactobacillus jensenii SJ-7A-US]
gi|282933890|ref|ZP_06339238.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
gi|313472318|ref|ZP_07812810.1| FeS assembly protein SufB [Lactobacillus jensenii 1153]
gi|238832602|gb|EEQ24909.1| FeS assembly protein SufB [Lactobacillus jensenii 269-3]
gi|239529828|gb|EEQ68829.1| FeS assembly protein SufB [Lactobacillus jensenii 1153]
gi|260561929|gb|EEX27898.1| FeS assembly protein SufB [Lactobacillus jensenii SJ-7A-US]
gi|281301979|gb|EFA94233.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
Length = 467
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 189/484 (39%), Positives = 288/484 (59%), Gaps = 19/484 (3%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T + ++ + QY+YGF+ +I+ + +GL+E+++R ISA KNEP WML+ RL AY +
Sbjct: 2 TDEAIKNLG-GQYQYGFKDDIEPIYTTGEGLSEEVVRKISAAKNEPKWMLDIRLAAYETY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
+ P++ +D++ + Y+ S + +DV ++ +T++KLG+P E++ L
Sbjct: 61 KKLSLPTFGP-DLTKLDYEHINYFRR-DSDFVARKWEDVPEDIKKTFDKLGVPQAERKYL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG A ++S V +++ + G+IFM A+ +HPDLVKKY +VP D
Sbjct: 119 AGSS-------AQYESEVVYHNMRKQFEDMGIIFMDTDTAVQKHPDLVKKYFGKLVPASD 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N AALN+AV++ G+F+Y+PKGV CP + +YFRIN +GQFERTLII DEG++V+Y+E
Sbjct: 172 NKLAALNTAVWSGGTFIYVPKGVSCPTPIQSYFRINAGNSGQFERTLIIVDEGAHVNYVE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP + LHAAVVE+ L +A +Y+T+QNW +Y+ TKR
Sbjct: 232 GCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNW-------SNNVYSLETKRAQAL-EN 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W GS +T KYPS L G+ + G SIA + D+G M+H AKNT S
Sbjct: 284 ATMEWVDGNLGSKVTMKYPSIYLNGQGAHGNMLSIAFAGKNIDSDTGATMVHNAKNTYSS 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
VSK + YRG + + S +CD++++ + + TIP+ E NS+ ++
Sbjct: 344 TVSKSLCKDGGIADYRGHIRFNEHCDGSFAHVECDTIIMDDKSSSDTIPFNEVLNSNVSM 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA SKIS+E L+Y + RGI EE A +IV GFV ++LPME+AVE +LI +++
Sbjct: 404 EHEAKVSKISEEQLYYLMSRGISEEKATEMIVMGFVEPFTKELPMEYAVELNRLIQLNMS 463
Query: 486 GSVG 489
G +G
Sbjct: 464 GGIG 467
>gi|227877521|ref|ZP_03995585.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus crispatus JV-V01]
gi|256842993|ref|ZP_05548481.1| FeS assembly protein SufB [Lactobacillus crispatus 125-2-CHN]
gi|256848635|ref|ZP_05554069.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262045960|ref|ZP_06018924.1| FeS assembly protein SufB [Lactobacillus crispatus MV-3A-US]
gi|293379885|ref|ZP_06626000.1| FeS assembly protein SufB [Lactobacillus crispatus 214-1]
gi|227862892|gb|EEJ70347.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus crispatus JV-V01]
gi|256614413|gb|EEU19614.1| FeS assembly protein SufB [Lactobacillus crispatus 125-2-CHN]
gi|256714174|gb|EEU29161.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260573919|gb|EEX30475.1| FeS assembly protein SufB [Lactobacillus crispatus MV-3A-US]
gi|290923546|gb|EFE00434.1| FeS assembly protein SufB [Lactobacillus crispatus 214-1]
Length = 467
Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats.
Identities = 191/487 (39%), Positives = 289/487 (59%), Gaps = 21/487 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + + V+ + Y++GF N++ GL ED+IR ISA+K+EP WML++RL A+
Sbjct: 1 MTKAEEIVKD---EDYQFGFHDNVKPKFSTGHGLTEDVIRQISAEKHEPKWMLDYRLKAF 57
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M PS+ +D DD+ YY + + +DV ++ T+E+LG+P E+
Sbjct: 58 HIYEKMPMPSFGP-DLSGLDLDDMLYYQK-MTDKKYRDWNDVPQDIKDTFERLGVPQAER 115
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A ++S V KE+ K G+IF A+ E+PDL+KKY +VP
Sbjct: 116 KYLAGSA-------AQYESEMVYHKMKEQFDKLGIIFTDTDTALQEYPDLLKKYFGKLVP 168
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ N ++ALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII D+ +++
Sbjct: 169 IDLNKFSALNCAVWSGGTFIYVPKGVQVPAPVQAYFRLNAENSGQFERTLIIVDQDAHLD 228
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAPQ + LHAAVVE+ LDNA +Y+T+QNW +Y+ TKR
Sbjct: 229 YVEGCTAPQYSSDSLHAAVVEVNVLDNAYCRYTTIQNW-------SDNVYSLETKRAVA- 280
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT
Sbjct: 281 GKHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNT 340
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G + YRG V + + S+ +CD++++ + + TIP +NS+
Sbjct: 341 SSSIVSKSIAKGGGSTDYRGSVKFSKKSDGSKAHVECDTIIMDDQSSSDTIPTNAIENSN 400
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEAT SKIS++ L+Y RGI E A +I+ GFV ++LPME+AVE +LI
Sbjct: 401 VAMEHEATVSKISEDQLYYLESRGISERKATEMIIMGFVEPFTKQLPMEYAVELNRLISF 460
Query: 483 SLEGSVG 489
+EG++G
Sbjct: 461 QMEGAIG 467
>gi|32491109|ref|NP_871363.1| cysteine desulfurase activator complex subunit SufB [Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis]
gi|25166316|dbj|BAC24506.1| ynhE [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 506
Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 271/484 (55%), Positives = 356/484 (73%), Gaps = 15/484 (3%)
Query: 12 RKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
++ YK GF T ++ ++ G+NE +++ IS K+ EP+WML +RL AY W MK+P
Sbjct: 32 DNTEITDYKEGFSTILKTEELEHGINEKVVKDISEKRQEPEWMLRFRLKAYDAWTKMKEP 91
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD------VDPELLRTYEKLGIPIREQEIL 125
W ++ ID++ YY+AP + + + E+ T+ KLGIP E+ +
Sbjct: 92 HWLNGKFENIDYNKYIYYSAPDCNEFKKEKKNNNNTKYLTKEVKNTFNKLGIPTSEKNNI 151
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
A +DA+FDSVSV TT+++ LKK G+IF S+AI ++P LVK+YL +VVPV D
Sbjct: 152 A--------IDAIFDSVSVSTTYQKFLKKIGIIFCSFSDAIKKYPKLVKEYLGSVVPVND 203
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
NF+AALNSAV +DG+F+Y+PKGVRCPMELSTYFRIN T QFERT++IADE SY+SY+E
Sbjct: 204 NFFAALNSAVASDGTFIYVPKGVRCPMELSTYFRINSANTNQFERTILIADEFSYISYIE 263
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP R+ QLHAAVVE++ L+NA +KYSTVQNW+PG KGGI NFVTKR C+G
Sbjct: 264 GCSAPIRNNYQLHAAVVEVILLNNARVKYSTVQNWFPGKKN-KGGILNFVTKRALCKGKE 322
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
SK+SWTQ ETGSAITWKYPS +L+G++S GEF+SIA++ +QQ D+GTKM+H+ K+T S
Sbjct: 323 SKMSWTQSETGSAITWKYPSVILKGDKSVGEFFSIALTKSYQQADTGTKMIHIGKDTKST 382
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I+SK IS+G SNNTYRG V + A +SRNFTQCDS+LIG+NCGAHT PYIE N N+
Sbjct: 383 IISKTISSGKSNNTYRGLVKILPLAKNSRNFTQCDSMLIGSNCGAHTFPYIEVFNKKSNI 442
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEATTSKI + +FYC QRGI E AI++IVNGF +E+ KLP+EFA+EAQKL+ I+L+
Sbjct: 443 EHEATTSKIEENQIFYCQQRGIKVEDAISMIVNGFCKEIFSKLPLEFAIEAQKLLSINLD 502
Query: 486 GSVG 489
SVG
Sbjct: 503 NSVG 506
>gi|90962851|ref|YP_536766.1| ABC transporter-associated protein [Lactobacillus salivarius
UCC118]
gi|301300115|ref|ZP_07206331.1| FeS assembly protein SufB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90822045|gb|ABE00683.1| ABC transporter-associated protein [Lactobacillus salivarius
UCC118]
gi|300852289|gb|EFK79957.1| FeS assembly protein SufB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 467
Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 192/482 (39%), Positives = 290/482 (60%), Gaps = 19/482 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ ++ I QYKYGF+ +I+ + +GL+E+++R IS KNEP+WML+ RL AY ++ T
Sbjct: 4 EDIKDIG-GQYKYGFKDDIEPIYTTGEGLSEEVVRNISKAKNEPEWMLDIRLAAYEKYKT 62
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+K ++ +D D + Y+ + + +DV E+ T+++LG+P E++ LAG
Sbjct: 63 LKMANFGP-DLSELDLDHINYFRR-DTDTVARKWEDVPQEIKDTFDRLGVPEAERKYLAG 120
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
A ++S V KE+ K G+IFM A+ E+P+LVKKY ++P DN
Sbjct: 121 SS-------AQYESEVVYHNMKEDFAKKGIIFMDTDSAVQEYPELVKKYFGKLIPADDNK 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
AALN+AV++ G+F+Y+PKGV+ + +YFRIN +GQFERTLII DEG+ V+Y+EGC
Sbjct: 174 MAALNTAVWSGGTFIYVPKGVKVETPIQSYFRINAGNSGQFERTLIIVDEGASVNYVEGC 233
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP ++ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR +
Sbjct: 234 TAPNYSQDSLHAAVVEVNVLKDAYCRYTTIQNW-------SNNVYSLETKRARAL-ENAT 285
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYPS L GE + G SIA + D+G +M+H AKNT S V
Sbjct: 286 MEWVDGNLGSKVTMKYPSIYLDGEGAHGNMLSIAFAGKGIDSDTGARMIHNAKNTYSSTV 345
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK + YRG V +R + S +CD++++ + + TIP+ E NS+ ++EH
Sbjct: 346 SKSLCKDGGIADYRGYVRFNRDSDGSFAHVECDTIIMDDESSSDTIPFNEVLNSNVSMEH 405
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA SKIS++ L+Y + RGI EE A +I+ GFV ++LPME+AVE +LI+ ++GS
Sbjct: 406 EAKVSKISEDQLYYLMSRGISEEKATEMIIMGFVEPFTKELPMEYAVELNRLIEYQMDGS 465
Query: 488 VG 489
VG
Sbjct: 466 VG 467
>gi|256851336|ref|ZP_05556725.1| FeS assembly protein SufB [Lactobacillus jensenii 27-2-CHN]
gi|260660761|ref|ZP_05861676.1| FeS assembly protein SufB [Lactobacillus jensenii 115-3-CHN]
gi|282933218|ref|ZP_06338605.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
gi|297206207|ref|ZP_06923602.1| FeS assembly protein SufB [Lactobacillus jensenii JV-V16]
gi|256616398|gb|EEU21586.1| FeS assembly protein SufB [Lactobacillus jensenii 27-2-CHN]
gi|260548483|gb|EEX24458.1| FeS assembly protein SufB [Lactobacillus jensenii 115-3-CHN]
gi|281302722|gb|EFA94937.1| FeS assembly protein SufB [Lactobacillus jensenii 208-1]
gi|297149333|gb|EFH29631.1| FeS assembly protein SufB [Lactobacillus jensenii JV-V16]
Length = 467
Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 189/484 (39%), Positives = 289/484 (59%), Gaps = 19/484 (3%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T + ++ + QY+YGF+ +I+ + +GL+E+++R ISA KNEP WML+ RL AY+ +
Sbjct: 2 TDEAIKNLG-GQYQYGFKDDIEPIYTTGEGLSEEVVRKISAAKNEPKWMLDIRLAAYKTY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
+ P++ +D++ + Y+ S + +DV ++ +T++KLG+P E++ L
Sbjct: 61 RKLSLPNFGP-DLTKLDYEHINYFRR-DSDFVARKWEDVPEDIKKTFDKLGVPQAERKYL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG A ++S V +++ + G+IFM A+ +HPDLVKKY +VP D
Sbjct: 119 AGSS-------AQYESEVVYHNMRKQFEDMGIIFMDTDTAVQKHPDLVKKYFGKLVPASD 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N AALN+AV++ G+F+Y+PKGV CP + +YFRIN +GQFERTLII DEG++V+Y+E
Sbjct: 172 NKLAALNTAVWSGGTFIYVPKGVSCPTPIQSYFRINAGNSGQFERTLIIVDEGAHVNYVE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAP + LHAAVVE+ L +A +Y+T+QNW +Y+ TKR
Sbjct: 232 GCTAPNYSADSLHAAVVEVNVLKDAYCRYTTIQNW-------SNNVYSLETKRAQAL-EN 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W GS +T KYPS L G+ + G SIA + D+G M+H AKNT S
Sbjct: 284 ATMEWVDGNLGSKVTMKYPSIYLNGQGAHGNMLSIAFAGKGIDSDTGATMVHNAKNTYSS 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
VSK + YRG + + S +CD++++ + + TIP+ E NS+ ++
Sbjct: 344 TVSKSLCKDGGIADYRGHIRFNEHCDGSFAHVECDTIIMDDKSSSDTIPFNEVLNSNVSM 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA SKIS+E L+Y + RGI EE A +IV GFV ++LPME+AVE +LI +++
Sbjct: 404 EHEAKVSKISEEQLYYLMSRGISEEKATEMIVMGFVEPFTKELPMEYAVELNRLIQLNMS 463
Query: 486 GSVG 489
G +G
Sbjct: 464 GGIG 467
>gi|293977905|ref|YP_003543335.1| iron-regulated ABC transporter membrane component SufB [Candidatus
Sulcia muelleri DMIN]
gi|292667836|gb|ADE35471.1| Iron-regulated ABC transporter membrane component SufB [Candidatus
Sulcia muelleri DMIN]
Length = 474
Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 293/486 (60%), Positives = 370/486 (76%), Gaps = 12/486 (2%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + + + + YKYGF T I+ +K PKG+NEDII IS KNEP WML+ RL +Y+
Sbjct: 1 MIKKKNIIYYFNNYDYKYGFYTKIESEKIPKGINEDIITKISKTKNEPYWMLKIRLKSYK 60
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
W M P WA I Y DF+++ YY+A K + ++D +LL T+ ++
Sbjct: 61 IWKNMIPPKWANISYKIPDFNNISYYSAIKKNKFIK--KEIDNKLLDTF---------KK 109
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
+ ++ SK+A+D + DSVSV TTFK+ L + G+IF PIS+AI ++PDL+KKY+ +VP+
Sbjct: 110 LNLKLKKSKIALDIIMDSVSVTTTFKKILSEKGIIFCPISKAIKKYPDLIKKYIGKIVPI 169
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DNFY+ALNSAVF+DGSF YIPK VRCP+ELSTYFRINE G GQFERTL+IAD+ SYVSY
Sbjct: 170 KDNFYSALNSAVFSDGSFCYIPKNVRCPVELSTYFRINESGIGQFERTLLIADKNSYVSY 229
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
LEGCTAPQR ENQLHAAVVEL+AL+ AEIKYSTVQNW+PGD G GG+ NFVTKRG C
Sbjct: 230 LEGCTAPQRKENQLHAAVVELIALEGAEIKYSTVQNWFPGDKNGIGGVLNFVTKRGLCEN 289
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
SKISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A + FQQ D+GTKM+HL KNT
Sbjct: 290 K-SKISWTQIETGSAITWKYPSCILKGNDSIGEFYSVAFTKNFQQSDTGTKMIHLGKNTK 348
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SKGISAG+S N+YRG V++ A +SRNF+QCDSLLIGN C AHT P+++ KN+S
Sbjct: 349 STIISKGISAGYSKNSYRGLVNISYKATNSRNFSQCDSLLIGNTCSAHTFPFLKGKNNSS 408
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEATTSKI ++ +FYC QRGI E AI+LIV GF +E+L +LPMEFA+EA+KL++I
Sbjct: 409 KVEHEATTSKIGEDQIFYCNQRGINLEKAISLIVTGFSKEILDRLPMEFAIEARKLLEIK 468
Query: 484 LEGSVG 489
LEGSVG
Sbjct: 469 LEGSVG 474
>gi|227892247|ref|ZP_04010052.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius ATCC 11741]
gi|227865969|gb|EEJ73390.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius ATCC 11741]
Length = 467
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 191/482 (39%), Positives = 290/482 (60%), Gaps = 19/482 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ ++ I QYKYGF+ +I+ + +GL+E+++R IS KNEP+WML+ RL AY ++ T
Sbjct: 4 EDIKDIG-GQYKYGFKDDIEPIYTTGEGLSEEVVRNISKAKNEPEWMLDIRLAAYEKYKT 62
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+K ++ +D D + Y+ + + +DV E+ T+++LG+P E++ LAG
Sbjct: 63 LKMANFGP-DLSELDLDHINYFRR-DTDTVARKWEDVPQEIKDTFDRLGVPEAERKYLAG 120
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
A ++S V KE+ K G+IFM A+ E+P+LVK+Y ++P DN
Sbjct: 121 SS-------AQYESEVVYHNMKEDFAKKGIIFMDTDSAVQEYPELVKEYFGKLIPADDNK 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
AALN+AV++ G+F+Y+PKGV+ + +YFRIN +GQFERTLII DEG+ V+Y+EGC
Sbjct: 174 MAALNTAVWSGGTFIYVPKGVKVETPIQSYFRINAGNSGQFERTLIIVDEGASVNYVEGC 233
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP ++ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR +
Sbjct: 234 TAPNYSQDSLHAAVVEVNVLKDAYCRYTTIQNW-------SNNVYSLETKRARAL-ENAT 285
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYPS L GE + G SIA + D+G +M+H AKNT S V
Sbjct: 286 MEWVDGNLGSKVTMKYPSIYLDGEGAHGNMLSIAFAGKGIDSDTGARMIHNAKNTYSSTV 345
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK + YRG V +R + S +CD++++ + + TIP+ E NS+ ++EH
Sbjct: 346 SKSLCKDGGIADYRGYVRFNRDSDGSFAHVECDTIIMDDESSSDTIPFNEVLNSNVSMEH 405
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA SKIS++ L+Y + RGI EE A +I+ GFV ++LPME+AVE +LI+ ++GS
Sbjct: 406 EAKVSKISEDQLYYLMSRGISEEKATEMIIMGFVEPFTKELPMEYAVELNRLIEYQMDGS 465
Query: 488 VG 489
VG
Sbjct: 466 VG 467
>gi|326792355|ref|YP_004310176.1| FeS assembly protein SufB [Clostridium lentocellum DSM 5427]
gi|326543119|gb|ADZ84978.1| FeS assembly protein SufB [Clostridium lentocellum DSM 5427]
Length = 465
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 176/476 (36%), Positives = 274/476 (57%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV++ Y + + + KGL ED+IR IS +KNEP WML++RL + + ++ P+W
Sbjct: 7 DVERGIYDIKNKDEYSYRTEKGLTEDVIRAISKEKNEPQWMLDFRLKSLAIYNSIPVPTW 66
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D++ Y PKS + ++VD + T+++LGI E LAG
Sbjct: 67 GP-DLSELDIDNIITYVRPKS-QLSDNWENVDQTIANTFDRLGIQEAESSSLAG------ 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V + + EL+ GV++ A ++ ++V++Y VP D+ +AAL+
Sbjct: 119 -VGAQYDSEVVYHSIQRELEAQGVVYTDFETACRDYEEIVREYFMKCVPPSDHKFAALHG 177
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVF+ GSFVY+PKGV+ M L +YFR+N G GQFE TLII +EG+ + ++EGC+AP+ +
Sbjct: 178 AVFSGGSFVYVPKGVQVNMPLQSYFRLNAPGAGQFEHTLIIVEEGASLHFIEGCSAPKHN 237
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LHA VEL +NA ++YST++NW +YN TKR + + W
Sbjct: 238 VINLHAGCVELYVKENARLRYSTIENW-------SKNMYNLNTKRAMIH-KNAHMEWVSG 289
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS ++ YP +L GE + +F I + Q +D+G K+ HLA +T S I ++ IS
Sbjct: 290 SFGSRVSMLYPMSVLIGEGASSDFTGITFAAKGQNLDTGAKVAHLAPHTKSTIHTRSISK 349
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
TYRG V + A S+ CD+L++ + +HT+P ++ KN + HEA K
Sbjct: 350 AGGETTYRGLVKISPKAYGSKASVNCDALMLDDISASHTVPVMDIKNDDVEIAHEAKIGK 409
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
ISDE +FY + RG+ EE A+ LIV GFV + ++LP+ +AVE LI++ ++G++G
Sbjct: 410 ISDEAIFYLMSRGLTEEEAVGLIVRGFVDPIAKELPVAYAVELNNLINLEMKGTIG 465
>gi|218281159|ref|ZP_03487685.1| hypothetical protein EUBIFOR_00246 [Eubacterium biforme DSM 3989]
gi|218217605|gb|EEC91143.1| hypothetical protein EUBIFOR_00246 [Eubacterium biforme DSM 3989]
Length = 470
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 200/490 (40%), Positives = 286/490 (58%), Gaps = 21/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + D +Y+YGF ++ V K KGLNE+ +R IS K EP+WML+ RL
Sbjct: 1 MEKMSNEKDIALS---SEYEYGFHDEDVSVYKTQKGLNEETVRTISKIKKEPEWMLQLRL 57
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY ++ ++P+W IDFDD YY P +S D+V + T++KLGIP
Sbjct: 58 DAYHSFVEQQNPNWGP-DLSEIDFDDYTYYIKPSDKQE-KSWDEVPDTIRNTFDKLGIPE 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ LAGV T ++S V EE+++ GVIF+ A+ PDL+KKY
Sbjct: 116 AEQKFLAGVST-------QYESEVVYHNMLEEVEEKGVIFLDTDSALRTCPDLLKKYFGK 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN YAALN+AV++ GSF+Y+PKGV+ L +YFRIN GQFERTLI+ DEG+
Sbjct: 169 LVPYTDNKYAALNTAVWSGGSFIYVPKGVKLEKPLQSYFRINSMSMGQFERTLIVVDEGA 228
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP ++ LHAAVVE+ NA+ +YSTVQNW I N VTKR
Sbjct: 229 DVHYVEGCTAPTYSKDSLHAAVVEIYVHKNAKCRYSTVQNW-------SSNILNLVTKRA 281
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ W GS + KYP+C+L + G SIA++ Q D+G+KM+HLA
Sbjct: 282 KVF-ENGHMEWIDGNVGSHVNMKYPACILAEPYAKGTTISIAVAGENQIQDAGSKMIHLA 340
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S I+SK I+ YRG V+ + AA++++ +CD+L++ + T+P S
Sbjct: 341 PHTSSTIISKSIARNGGEVNYRGWVTHSKNAAYAKSKVECDTLILDKKSRSDTVPMNVSY 400
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +EHEAT S IS+E LFY + RG+ A +IV GF+ ++LPME+AVE ++
Sbjct: 401 NDTSQIEHEATVSNISEEQLFYLMSRGLTRSQATEMIVMGFLEPFTRELPMEYAVELNQM 460
Query: 480 IDISLEGSVG 489
+ + + S+G
Sbjct: 461 LKLDMSDSIG 470
>gi|284047829|ref|YP_003398168.1| FeS assembly protein SufB [Acidaminococcus fermentans DSM 20731]
gi|283952050|gb|ADB46853.1| FeS assembly protein SufB [Acidaminococcus fermentans DSM 20731]
Length = 488
Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 277/489 (56%), Gaps = 21/489 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
+ R+T+D + Y F+ + + K GL D++R ISAKK+EP WML+ RL
Sbjct: 20 LQKERKTIDALTDFSN---MYDFKKDSNHEYKTEAGLTPDVVREISAKKDEPQWMLDARL 76
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + + P W +D ++ Y P + + +D+ ++ T+++LGIP
Sbjct: 77 KSLDLYYQIPYPVWGP-DISGLDMANIVTYVRPNARMSAN-WNDLPEDIKDTFDRLGIPE 134
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ L+G V A +DS V + ++EL + GVI+ A+ ++ D+V+K+
Sbjct: 135 AEKTSLSG-------VGAQYDSEVVYHSIQDELVQQGVIYTDFDTAVKKYEDIVRKHFMK 187
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++P D+ +AAL+ AV++ GSFVY+P+GV + L +YFR+N G GQFE T+II ++G+
Sbjct: 188 LIPPTDHKFAALHGAVWSGGSFVYVPEGVDVSIPLQSYFRLNAPGAGQFEHTMIIVEKGA 247
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V ++EGC+AP+ + LHA VEL D+A + YST++NW +YN TKR
Sbjct: 248 KVHFIEGCSAPKYNVANLHAGAVELFIGDDATLTYSTIENW-------SKNMYNMNTKRA 300
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
G I+W GS + YP +L GE + EF + + Q +D+G+K++H A
Sbjct: 301 IV-GKNGTINWVTGSFGSHTSCLYPMSILNGEGAHCEFTGVTFAGKGQYLDTGSKVVHNA 359
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+TTS I SK IS YRG V ++ A S++ C+SL++ + TIP I K
Sbjct: 360 PHTTSNINSKSISKDGGVCIYRGSVVINECAEGSKSNVSCESLMLDEQSQSDTIPAIVIK 419
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + +L HEA +ISDE +FY + RG+ E+ A A++V GFV V + LP+E+AVE L
Sbjct: 420 NDNVDLGHEAKIGRISDEAIFYLMSRGLSEDEARAMLVRGFVDPVSKALPLEYAVEMNNL 479
Query: 480 IDISLEGSV 488
I++ L+GS+
Sbjct: 480 INLELKGSM 488
>gi|227893112|ref|ZP_04010917.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus ultunensis DSM 16047]
gi|227865090|gb|EEJ72511.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus ultunensis DSM 16047]
Length = 467
Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats.
Identities = 190/484 (39%), Positives = 289/484 (59%), Gaps = 19/484 (3%)
Query: 8 VDKVRKIDVDQ-YKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ KV I D+ Y+YGF N++ +GLNE+++R ISA+K+EP WML++RL +++ +
Sbjct: 1 MTKVEDIVKDEDYQYGFHDNVKPKFSTGRGLNEEVVRKISAEKHEPQWMLDYRLKSFKIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M P++ +D D+ YY + + DV ++ T+E+LG+P E++ L
Sbjct: 61 QKMAMPNFGP-DLSGLDLKDMLYYQK-MTDKKYRDWKDVPEDIKETFERLGVPQAERKYL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG A ++S V K++ K G++FM A+ ++P+L KKY +V
Sbjct: 119 AGSA-------AQYESEMVYHNMKKQFDKLGIVFMDTDSALQQYPELFKKYFGKLVKPTS 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N +AALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII D+G+++ Y+E
Sbjct: 172 NKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQFERTLIIVDKGAHLDYVE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAPQ + LHAAVVE+ LD+A +Y+T+QNW +Y+ TKR G
Sbjct: 232 GCTAPQYSSDSLHAAVVEVNVLDDAYCRYTTIQNW-------SDNVYSLETKRAVA-GAH 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT+S
Sbjct: 284 ATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNTSSS 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK I+ G + YRG V + + S+ +CD++++ + + TIP E N+ +
Sbjct: 344 IVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPTNEINNAHVAM 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEAT SK+SDE L+Y RGIPE A +I+ GFV ++LPME+AVE +LI +E
Sbjct: 404 EHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVELNRLISFQME 463
Query: 486 GSVG 489
G++G
Sbjct: 464 GAIG 467
>gi|300215443|gb|ADJ79856.1| ABC transporter-associated protein [Lactobacillus salivarius CECT
5713]
Length = 470
Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats.
Identities = 192/482 (39%), Positives = 290/482 (60%), Gaps = 19/482 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ ++ I QYKYGF+ +I+ + +GL+E+++R IS KNEP+WML+ RL AY ++ T
Sbjct: 7 EDIKDIG-GQYKYGFKDDIEPIYTTGEGLSEEVVRNISKAKNEPEWMLDIRLAAYEKYKT 65
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
+K ++ +D D + Y+ + + +DV E+ T+++LG+P E++ LAG
Sbjct: 66 LKMANFGP-DLSELDLDHINYFRR-DTDTVARKWEDVPQEIKDTFDRLGVPEAERKYLAG 123
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
A ++S V KE+ K G+IFM A+ E+P+LVKKY ++P DN
Sbjct: 124 SS-------AQYESEVVYHNMKEDFAKKGIIFMDTDSAVQEYPELVKKYFGKLIPADDNK 176
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
AALN+AV++ G+F+Y+PKGV+ + +YFRIN +GQFERTLII DEG+ V+Y+EGC
Sbjct: 177 MAALNTAVWSGGTFIYVPKGVKVETPIQSYFRINAGNSGQFERTLIIVDEGASVNYVEGC 236
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP ++ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR +
Sbjct: 237 TAPNYSQDSLHAAVVEVNVLRDAYCRYTTIQNW-------SNNVYSLETKRARAL-ENAT 288
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GS +T KYPS L GE + G SIA + D+G +M+H AKNT S V
Sbjct: 289 MEWVDGNLGSKVTMKYPSIYLDGEGAHGNMLSIAFAGKGIDSDTGARMIHNAKNTYSSTV 348
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK + YRG V +R + S +CD++++ + + TIP+ E NS+ ++EH
Sbjct: 349 SKSLCKDGGIADYRGYVRFNRDSDGSFAHVECDTIIMDDESSSDTIPFNEVLNSNVSMEH 408
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EA SKIS++ L+Y + RGI EE A +I+ GFV ++LPME+AVE +LI+ ++GS
Sbjct: 409 EAKVSKISEDQLYYLMSRGISEEKATEMIIMGFVEPFTKELPMEYAVELNRLIEYQMDGS 468
Query: 488 VG 489
VG
Sbjct: 469 VG 470
>gi|320547142|ref|ZP_08041438.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
gi|320448268|gb|EFW89015.1| FeS assembly protein SufB [Streptococcus equinus ATCC 9812]
Length = 461
Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats.
Identities = 189/475 (39%), Positives = 282/475 (59%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+Y YGF ++ KGL E+I+R ISA K+EP+WMLE+RL + + + P +
Sbjct: 4 NREYDYGFHDDVTPTYSTGKGLTEEIVRNISAYKHEPEWMLEYRLKSLELFYKLPMPDFG 63
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFDD+ Y+ + DDV ++ T+E+LGIP E++ L+G
Sbjct: 64 P-DLSGIDFDDVIYFQK-LADKKVNDWDDVPDKIKETFERLGIPQAERDYLSGAV----- 116
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
A ++S V KEE +K G+IF A+ E+P+L KKY +V ++ +AALN A
Sbjct: 117 --AQYESEVVYHNMKEEFQKQGIIFTDTDTALQEYPELFKKYFGKIVSNSEHKFAALNGA 174
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+C + + TYFRIN + GQFER+LII DEG+ + Y+EGCTAP
Sbjct: 175 VWSGGSFIYVPKGVQCDIPVQTYFRINGENAGQFERSLIIVDEGASIQYIEGCTAPNYST 234
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N LHAA VE+V +A +Y+T+QNW +YN VT+RG + W
Sbjct: 235 NSLHAATVEIVVKRDASFRYTTMQNW-------SDNVYNLVTERGRV-EENGMLEWIDGN 286
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS + KYP +L G + S+A +N Q +D+G K+ H A +T+S ++SK ++
Sbjct: 287 LGSKVNMKYPCSILAGPHAKTSVLSMAFANYGQHLDAGCKVYHNAPHTSSTLISKSVAKD 346
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + + S++ +CD++L+ + + TIP+ E NS+ +LEHEA SK+
Sbjct: 347 GGKTDYRGSVYFGKHSDGSKSHIECDTILMDDLSSSDTIPFNEIHNSNVSLEHEAKVSKV 406
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E L+Y + RGI EE A A+IVNGF+ + ++LPME+AVE LI +S+E S+G
Sbjct: 407 SEEQLYYMMSRGISEEEATAMIVNGFMEPITKELPMEYAVEMNSLITMSMEDSIG 461
>gi|323467017|gb|ADX70704.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus helveticus H10]
Length = 467
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 189/484 (39%), Positives = 289/484 (59%), Gaps = 19/484 (3%)
Query: 8 VDKVRKIDVDQ-YKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ KV I D+ Y+YGF N++ +GLNE+++R ISA+K+EP WML++RL +++ +
Sbjct: 1 MTKVEDIVKDEDYQYGFHDNVKPKFSTGRGLNEEVVRKISAEKHEPQWMLDYRLKSFKIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M P++ +D D+ YY + + DV ++ T+E+LG+P E++ L
Sbjct: 61 QKMAMPNFGP-DLSGLDLKDMLYYQK-MTDKKYRDWKDVPEDIKETFERLGVPQAERKYL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG A ++S V K++ K G++FM A+ ++P+L KKY +V
Sbjct: 119 AGSA-------AQYESEMVYHNMKKQFDKLGIVFMDTDSALQQYPELFKKYFGKLVKPTS 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N +AALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII D+G+++ Y+E
Sbjct: 172 NKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQFERTLIIVDKGAHLDYVE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAPQ + LHAAVVE+ L++A +Y+T+QNW +Y+ TKR G
Sbjct: 232 GCTAPQYSSDSLHAAVVEVNVLNDAYCRYTTIQNW-------SDNVYSLETKRAVA-GAH 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT+S
Sbjct: 284 ATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNTSSS 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK I+ G + YRG V + + S+ +CD++++ + + TIP E N+ +
Sbjct: 344 IVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPTNEINNAHVAM 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEAT SK+SDE L+Y RGIPE A +I+ GFV ++LPME+AVE +LI +E
Sbjct: 404 EHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVELNRLISFQME 463
Query: 486 GSVG 489
G++G
Sbjct: 464 GAIG 467
>gi|171777392|ref|ZP_02919181.1| hypothetical protein STRINF_00008 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283272|gb|EDT48696.1| hypothetical protein STRINF_00008 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 436
Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 193/453 (42%), Positives = 274/453 (60%), Gaps = 17/453 (3%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ED++R +SA+K EP+WMLE+RL + + M W IDFD++ YY
Sbjct: 1 SEDVVRELSAEKGEPEWMLEFRLKSLEIFNKMPMQDWGP-DLSDIDFDEITYYQKVSDKP 59
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+S +DV ++ T+E++GIP E+ LAG A ++S V K+E K G
Sbjct: 60 A-RSWNDVPDKIKETFERIGIPEAERAYLAGAS-------AQYESEVVYHNMKDEYDKLG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
++F A+ E+P+L KKY S +VP DN AALNSA ++ G+F+Y+PKGV+ + L T
Sbjct: 112 IVFTDTDSALKEYPELFKKYFSKLVPPTDNKLAALNSAFWSGGTFIYVPKGVKVDIPLQT 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
YFRIN + GQFERTLII DEG+ V Y+EGCTAP LHAA+VE+ AL+ + ++YST
Sbjct: 172 YFRINNEAMGQFERTLIIVDEGASVHYVEGCTAPNYSSASLHAAIVEIFALEGSYMRYST 231
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+QNW +YN VTKR + + + W G+ T KYPS L GE + G
Sbjct: 232 IQNW-------SDNVYNLVTKRATAK-KNATVEWIDGNLGAKTTMKYPSVYLDGEGARGT 283
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
SIA +N Q D+G KM+H A +T+S IVSK I+ G YRG+V+ ++ + S +
Sbjct: 284 MLSIAFANKGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSH 343
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+CD++L+ + + TIP+ E NS LEHEA SKIS+E L+Y + RG+ E+ A +I
Sbjct: 344 IECDTILMDDISSSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSEQEATEMI 403
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
V GFV ++LPME+AVE +LI +EGSVG
Sbjct: 404 VMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 436
>gi|257125281|ref|YP_003163395.1| FeS assembly protein SufB [Leptotrichia buccalis C-1013-b]
gi|257049220|gb|ACV38404.1| FeS assembly protein SufB [Leptotrichia buccalis C-1013-b]
Length = 473
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 184/490 (37%), Positives = 282/490 (57%), Gaps = 18/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E K D+++ Y + K KGL +II IS +KNEPDWM E+RL
Sbjct: 1 MGKM-ENRKKTYVADIERGVYDIKDEGHYRYKVDKGLTAEIINKISDRKNEPDWMREFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + + W +D +D+ +Y P S ++ DDV + T+++LGIP
Sbjct: 60 KALEVYDSKPMTDWGP-DLSDLDVNDIVHYLEPDSAPMNENWDDVPSYIRDTFDRLGIPE 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG V A +DS V + ++L++ GVI+ I AI E+ D++K++
Sbjct: 119 AEKQSLAG-------VGAQYDSEVVYHSIHKDLEEQGVIYTDIETAIVEYEDIMKEHFMK 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++ + D+ +AAL+ AV++ GSF+Y+PKGV+ M L +YFR+N GQFE TLII DEG+
Sbjct: 172 LISINDHKFAALHGAVWSGGSFIYVPKGVKVKMPLQSYFRLNAPEAGQFEHTLIIVDEGA 231
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ ++EGC+AP+ +N LHA VEL+ A ++YST++NW +YN TKR
Sbjct: 232 DLHFIEGCSAPKYKKNVLHAGAVELIVKKGARLRYSTIENW-------SRNMYNLNTKRA 284
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
I W GS ++ YP +L+G++S EF + + Q +D+G K++H
Sbjct: 285 LV-EEDGVIEWVSGSFGSRVSMLYPMSILKGDRSRCEFTGVTFAAAGQYLDTGCKIIHQG 343
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
K T+S + SK IS YRG + V A SR+ +C+SL++ N + TIP I+
Sbjct: 344 KQTSSTVHSKSISKNGGTAFYRGLLKVLPEATGSRSTVECESLMLDNLSSSDTIPIIDIN 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S ++ HEA +ISDE +FY + RGI E+ A A+IV GFV + ++LP+E+AVE KL
Sbjct: 404 NDSVDIGHEAKIGRISDEAIFYLMSRGISEDEAKAMIVRGFVEPISKELPLEYAVELNKL 463
Query: 480 IDISLEGSVG 489
I++ LEG++G
Sbjct: 464 IELELEGTIG 473
>gi|295099526|emb|CBK88615.1| Iron-regulated ABC transporter membrane component SufB [Eubacterium
cylindroides T2-87]
Length = 467
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 203/480 (42%), Positives = 288/480 (60%), Gaps = 19/480 (3%)
Query: 12 RKIDVD-QYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ +D+ +Y+YGF ++ V K KGLNE+ +R IS KNEP+WML+ RL AY ++ K
Sbjct: 5 KNLDLKNEYEYGFHDEDVSVYKTEKGLNEETVRMISKIKNEPEWMLDLRLKAYHSFVEQK 64
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P+W I+FDD YY P Q+ ++V + T+++LGIP EQ+ LAGV
Sbjct: 65 NPNWGP-DLSQINFDDYTYYIKPSDRQQ-QNWEEVPETIRNTFDRLGIPEAEQKYLAGVS 122
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
T ++S V EE+++ GVIF+ A+ PD+ K+Y +VP DN YA
Sbjct: 123 T-------QYESEVVYHNMLEEVEEKGVIFLDTDTALKTCPDIFKEYFGKIVPYTDNKYA 175
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
ALN+AV++ GSF+Y+PKGV+ L +YFRIN GQFERTLII DEG+ V Y+EGCTA
Sbjct: 176 ALNTAVWSGGSFIYVPKGVKLEKPLQSYFRINSMQMGQFERTLIIVDEGADVHYVEGCTA 235
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P ++ LHAAVVE+ NA+ +YSTVQNW I N VTKR +
Sbjct: 236 PIYSKDSLHAAVVEIYVHKNAKCRYSTVQNW-------SSNILNLVTKRAKVF-ENGHME 287
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS I KYP+C+L + G SIA+++ Q D+G+KM+HLA +TTS IVSK
Sbjct: 288 WIDGNVGSHINMKYPACILAEPYAKGTTISIAVASKNQIQDAGSKMIHLADHTTSTIVSK 347
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
I+ YRG V+ AAH+++ +CD+L++ + TIP KN + +EHEA
Sbjct: 348 SIARNGGEVNYRGWVNHSPKAAHAKSKVECDTLILDKVSRSDTIPLNIFKNDTSQIEHEA 407
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
T S IS+E LFY + RG+ E A +I+ GF+ ++LPME+AVE +L+ + + S+G
Sbjct: 408 TVSNISEEQLFYLMSRGLSREKATEMIIMGFLEPFTRELPMEYAVELNQLLKLDMSDSIG 467
>gi|224543037|ref|ZP_03683576.1| hypothetical protein CATMIT_02237 [Catenibacterium mitsuokai DSM
15897]
gi|224524062|gb|EEF93167.1| hypothetical protein CATMIT_02237 [Catenibacterium mitsuokai DSM
15897]
Length = 468
Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats.
Identities = 187/467 (40%), Positives = 279/467 (59%), Gaps = 18/467 (3%)
Query: 24 ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDF 83
+ ++ V K PKGLNEDI+R ISA K EP+WM E+R+ + +++L M P W + +DF
Sbjct: 19 DEDVSVFKTPKGLNEDIVREISAIKEEPEWMTEYRIKSLKQFLKMPMPKWG-VDLSKMDF 77
Query: 84 DDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
DD YY P S ++V + T+++LGIP EQ+ LAG A ++S
Sbjct: 78 DDYTYYNRP-SDTKTDKWEEVPETIKNTFDRLGIPEAEQKFLAGAS-------AQYESEV 129
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
V EE+K+ GVIF+ I + ++P++ KKY TV+P DN ++ALN AV++ GSF+Y
Sbjct: 130 VYHNMLEEVKEKGVIFLDIDSGLKQYPEIFKKYFDTVIPYYDNKFSALNGAVWSGGSFIY 189
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+P + L +YFRIN + QFERTLII DEGS + Y+EGCTAP ++ LHA VVE
Sbjct: 190 VPPHTKLDKPLQSYFRINSERMAQFERTLIIVDEGSDIHYVEGCTAPSYSKDSLHAGVVE 249
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
++ NA +Y+T+QNW IYN VT+R + W GS +T KY
Sbjct: 250 IIVGKNAHCRYTTIQNW-------SKNIYNLVTQRAKVM-EGGSMEWVDGNIGSLVTMKY 301
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
P C+L GE++ G +IA+ + Q IDSG KM+H A +T+S+I+SK I+ YRG
Sbjct: 302 PCCVLAGERAKGTVITIAVGDKGQIIDSGAKMIHAAPHTSSQIISKSIARNGGKTNYRGL 361
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V ++ A ++ +CD+L++ + T+P N+ +EHEAT SK+S++ LFY +
Sbjct: 362 VRHNKNAYDCKSKVECDTLILDKISTSDTVPTNIMANNDSIIEHEATVSKVSEDQLFYLM 421
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL-EGSVG 489
RG+ + A +IV GF+ ++LPME+AVE +LI + + E ++G
Sbjct: 422 SRGLTKAQATEMIVMGFIEPFSRELPMEYAVELNQLIKLDMSEDAIG 468
>gi|313901166|ref|ZP_07834654.1| FeS assembly protein SufB [Clostridium sp. HGF2]
gi|312954124|gb|EFR35804.1| FeS assembly protein SufB [Clostridium sp. HGF2]
Length = 466
Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats.
Identities = 204/487 (41%), Positives = 280/487 (57%), Gaps = 22/487 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ ET V + +YKYGF ++ + KGL D I IS KK EP WML++RL A+
Sbjct: 1 MSETRIPVNE----EYKYGFHDEDVSIYNTGKGLTRDTILAISHKKKEPQWMLDFRLRAF 56
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
++ +M +W +DFDD YY P +S +DV + T++KLGIP E+
Sbjct: 57 EQFESMDIQTWGP-DVTNLDFDDYTYYIKPSDKTE-KSWEDVPDTIKDTFDKLGIPEAEK 114
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAGV T +DS +V EE++ GVIF+ A+ +HPDL +KY +VP
Sbjct: 115 EFLAGVTT-------QYDSEAVYHNMLEEVESKGVIFLDTDTALKQHPDLFQKYFGRLVP 167
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN +AALNS V++ GSF+Y+PKGV+ L +YFRIN + GQFERTLII DEG+ V
Sbjct: 168 YTDNKFAALNSCVWSGGSFIYVPKGVKLEKPLQSYFRINTERMGQFERTLIIVDEGADVH 227
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP ++ LHAAVVE+ NA +YSTVQNW I N VTKR
Sbjct: 228 YVEGCTAPTYSKDSLHAAVVEIFVHKNARCRYSTVQNW-------SDNIINLVTKRAKVF 280
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ W GS KYP+C+L + G SIA++ Q D+G KM+HLA +T
Sbjct: 281 -ENGSMEWIDGNIGSQTNMKYPACILAEPYAKGTCISIAVAGKHQIQDAGAKMIHLADHT 339
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S IVSK +S YRG V AA +++ +CD+L++ + TIP SKN +
Sbjct: 340 YSNIVSKSVSRNGGEVNYRGLVLHGPNAAFAKSKVECDTLILDKQSRSDTIPTNISKNMT 399
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEAT S IS+E LFY + RG+ AA +IV GF+ ++LPME+AVE +L+ +
Sbjct: 400 SQIEHEATVSNISEEQLFYLMSRGLSRSAATEMIVMGFLEPFTRELPMEYAVELNQLLKL 459
Query: 483 SLEGSVG 489
+ S+G
Sbjct: 460 DMSDSIG 466
>gi|30468048|ref|NP_848935.1| putative ABC transporter [Cyanidioschyzon merolae strain 10D]
gi|30409148|dbj|BAC76097.1| ABC transporter [Cyanidioschyzon merolae strain 10D]
Length = 465
Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats.
Identities = 263/476 (55%), Positives = 341/476 (71%), Gaps = 19/476 (3%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ + +Y YGF T+ + P GLNE I++ ISAKK EP +ML++RL AY W M
Sbjct: 7 LDRWLNREYAYGFSTSFDYEPFPIGLNEQIVKMISAKKCEPQFMLDFRLKAYHIWKQMPR 66
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WAR+ Y I+F+ + YYAAP + ++ T KLG+ +
Sbjct: 67 PQWARVAYETINFEQILYYAAPSTTE---------DDVQSTLAKLGVKP----------S 107
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
SKVA+D VFDSVS+ T F + LK +GVIF ISEAI ++P LVKKYL++VVP+GDNF++A
Sbjct: 108 SKVALDPVFDSVSLGTGFHQALKDAGVIFCSISEAIQKYPSLVKKYLASVVPIGDNFFSA 167
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+DGSF YIP+ CPMELSTYFR+ ++G+GQFERTLIIA++G+ VSYLEGCTA
Sbjct: 168 LNSAVFSDGSFCYIPQDTACPMELSTYFRLQKEGSGQFERTLIIAEKGASVSYLEGCTAA 227
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ D +QLHAAVVEL+ALD+A IKYSTVQNWY GD +GKGGIYNFVTKRG C G +KISW
Sbjct: 228 RYDRHQLHAAVVELIALDHASIKYSTVQNWYSGDQEGKGGIYNFVTKRGLCAGEGAKISW 287
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
TQ+ETGSAITWKYPSC+L + +FYS+A+++G+QQ D+G+KM+HL N+ SRI+SKG
Sbjct: 288 TQVETGSAITWKYPSCILAANNTRADFYSVALTDGYQQADTGSKMIHLGANSKSRIISKG 347
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
I G S NTYRG+V + A + N +QCDSL++G A+T PYIE N S +EHEAT
Sbjct: 348 ICGGKSMNTYRGQVKMTSAAQKAWNHSQCDSLILGKKATANTYPYIEIANVSARVEHEAT 407
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
T++I +E LFY QRGI + A+ +V GF ++V +LPMEFA E +L+ I LEG
Sbjct: 408 TTQIGEEQLFYLQQRGINVQDAVNQMVLGFCQQVFLQLPMEFATEVNELLTIKLEG 463
>gi|259501623|ref|ZP_05744525.1| FeS assembly protein SufB [Lactobacillus iners DSM 13335]
gi|302191170|ref|ZP_07267424.1| hypothetical protein LineA_04102 [Lactobacillus iners AB-1]
gi|309803262|ref|ZP_07697359.1| FeS assembly protein SufB [Lactobacillus iners LactinV 11V1-d]
gi|309804777|ref|ZP_07698841.1| FeS assembly protein SufB [Lactobacillus iners LactinV 09V1-c]
gi|309806292|ref|ZP_07700305.1| FeS assembly protein SufB [Lactobacillus iners LactinV 03V1-b]
gi|309807888|ref|ZP_07701819.1| FeS assembly protein SufB [Lactobacillus iners LactinV 01V1-a]
gi|309809966|ref|ZP_07703814.1| FeS assembly protein SufB [Lactobacillus iners SPIN 2503V10-D]
gi|312871666|ref|ZP_07731758.1| FeS assembly protein SufB [Lactobacillus iners LEAF 3008A-a]
gi|312871944|ref|ZP_07732026.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2062A-h1]
gi|312873223|ref|ZP_07733279.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2052A-d]
gi|312874616|ref|ZP_07734640.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2053A-b]
gi|315653686|ref|ZP_07906606.1| FeS assembly protein SufB [Lactobacillus iners ATCC 55195]
gi|325911758|ref|ZP_08174165.1| FeS assembly protein SufB [Lactobacillus iners UPII 143-D]
gi|325913048|ref|ZP_08175421.1| FeS assembly protein SufB [Lactobacillus iners UPII 60-B]
gi|329921075|ref|ZP_08277598.1| FeS assembly protein SufB [Lactobacillus iners SPIN 1401G]
gi|259166908|gb|EEW51403.1| FeS assembly protein SufB [Lactobacillus iners DSM 13335]
gi|308164770|gb|EFO67020.1| FeS assembly protein SufB [Lactobacillus iners LactinV 11V1-d]
gi|308165887|gb|EFO68106.1| FeS assembly protein SufB [Lactobacillus iners LactinV 09V1-c]
gi|308167276|gb|EFO69442.1| FeS assembly protein SufB [Lactobacillus iners LactinV 03V1-b]
gi|308168868|gb|EFO70955.1| FeS assembly protein SufB [Lactobacillus iners LactinV 01V1-a]
gi|308169754|gb|EFO71799.1| FeS assembly protein SufB [Lactobacillus iners SPIN 2503V10-D]
gi|311089846|gb|EFQ48266.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2053A-b]
gi|311091234|gb|EFQ49622.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2052A-d]
gi|311092521|gb|EFQ50883.1| FeS assembly protein SufB [Lactobacillus iners LEAF 2062A-h1]
gi|311092891|gb|EFQ51243.1| FeS assembly protein SufB [Lactobacillus iners LEAF 3008A-a]
gi|315489048|gb|EFU78690.1| FeS assembly protein SufB [Lactobacillus iners ATCC 55195]
gi|325476524|gb|EGC79683.1| FeS assembly protein SufB [Lactobacillus iners UPII 143-D]
gi|325477728|gb|EGC80867.1| FeS assembly protein SufB [Lactobacillus iners UPII 60-B]
gi|328934982|gb|EGG31471.1| FeS assembly protein SufB [Lactobacillus iners SPIN 1401G]
Length = 467
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 190/477 (39%), Positives = 287/477 (60%), Gaps = 18/477 (3%)
Query: 14 IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
++ D Y++GF NI+ +GL E+I+R ISA+KNEP WML++RL AY+ + M PS
Sbjct: 8 VNDDAYQFGFHDNIKPKFSTGRGLTEEIVRKISAEKNEPKWMLDYRLQAYQIYQKMPFPS 67
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
+D +++ YY + +DV ++ T+EKLG+P E++ LAG
Sbjct: 68 IGP-DLSGLDLENMLYYQKVTDK-KYRDWNDVPEDIKLTFEKLGVPQAERKYLAGSA--- 122
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
A ++S V K++ K G+IFM A+ E+PD+ KKY + DN +AALN
Sbjct: 123 ----AQYESEMVYHNMKKQFDKLGIIFMDTDSALKEYPDIFKKYFGKIAHPTDNKFAALN 178
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
AV++ GSF+Y+PKGV+ + YFR+N + +GQFERTLII D+ +++ Y+EGCTAPQ
Sbjct: 179 CAVWSGGSFIYVPKGVKVNTPIQAYFRLNAENSGQFERTLIIVDQDAHLDYVEGCTAPQY 238
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+ LHAAVVE+ L+ A +Y+T+QNW +Y+ TK+ + + + W
Sbjct: 239 SSDSLHAAVVEVNVLEGAYCRYTTIQNW-------SDNVYSLETKKAQAQ-KNATMEWVD 290
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
G+ +T KYPS L GE + G SIA+++ DSG +MLH A NT+S IVSK I+
Sbjct: 291 GNLGAKVTMKYPSVYLNGEGAKGTMLSIAVAHHGVHQDSGARMLHNAPNTSSSIVSKSIA 350
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
G + YRG V + ++ S++ +CD++++ + + TIP +NS+ +EHEAT S
Sbjct: 351 RGGGSTDYRGTVDFSKNSSGSKSHVECDTIIMDDMSSSDTIPTNAIENSNVAMEHEATVS 410
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
KIS+E L+Y + RGI E A +I+ GFV Q+LPME+AVE +LI +EG++G
Sbjct: 411 KISEEQLYYLMSRGISERKATEMIIMGFVEPFTQQLPMEYAVELNRLISFQMEGAIG 467
>gi|293400817|ref|ZP_06644962.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305843|gb|EFE47087.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 465
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 200/478 (41%), Positives = 277/478 (57%), Gaps = 18/478 (3%)
Query: 13 KIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+I + YKYGF +I + K +GL E+ IR IS K EP+WML +RL A+ +++ M
Sbjct: 5 QIPSEDYKYGFHDEDISLYKTKQGLTEETIREISRIKQEPEWMLNYRLQAFAKFMEMPIQ 64
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
W ++FD+ YY P Q +DV + T++KLGIP E+E LAGV T
Sbjct: 65 DWGPE-LSRLNFDEYTYYIKPSDKTE-QRWEDVPETIKETFDKLGIPEAEKEFLAGVTT- 121
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
+DS +V EE++ GVIF+ A+ +HPDL KKY +VP DN +AAL
Sbjct: 122 ------QYDSEAVYHNMLEEVESKGVIFLDTDTALKKHPDLFKKYFGKLVPYTDNKFAAL 175
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
NS V++ GSF+Y+PKGV L +YFRIN + GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 176 NSCVWSGGSFIYVPKGVHLEKPLQSYFRINTERMGQFERTLIIVDEGADVHYVEGCTAPI 235
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
++ LHAAVVE+ NA +YSTVQNW I N VTKR S + W
Sbjct: 236 YSKDSLHAAVVEIFVHKNARCRYSTVQNW-------SDNIINLVTKRAKVFANGS-MEWI 287
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS + KYP+C+L + G SIA++ Q D+G KM+HLA++T S I+SK +
Sbjct: 288 DGNIGSGVNMKYPACILAEPYAKGICVSIAVAGKKQIQDAGAKMIHLAEDTYSNIISKSV 347
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S YRG V A +++ +CD+L++ + TIP SKN + +EHEAT
Sbjct: 348 SRNGGEVNYRGLVFHGPKAQRAKSKVECDTLILDKQSRSDTIPTNVSKNKTSQIEHEATV 407
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S IS+E LFY + RG+ A +IV GF+ ++LPME+AVE +L+ + + S+G
Sbjct: 408 SNISEEQLFYLMSRGLSRGQATEMIVMGFLEPFTRELPMEYAVELNQLLKLDMSDSIG 465
>gi|312898864|ref|ZP_07758252.1| FeS assembly protein SufB [Megasphaera micronuciformis F0359]
gi|310620026|gb|EFQ03598.1| FeS assembly protein SufB [Megasphaera micronuciformis F0359]
Length = 476
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 175/492 (35%), Positives = 281/492 (57%), Gaps = 21/492 (4%)
Query: 1 MVAVR---ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M + + +K+ Y F+ + + K GL E+I+R ISA+K+EP+WML+
Sbjct: 1 MAEEKRFAKEREKIESFSDFSNVYNFKKDFKYSYKTDAGLTEEIVREISAQKDEPEWMLQ 60
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
RL + + + P+W + D++ Y P + + ++V ++ T+++LG
Sbjct: 61 ARLKSLELFYKIDYPTWGP-DISELQMDNIVTYVRPDAGLKAD-WNEVPEDIKDTFDRLG 118
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
IP E+ LAG V A +DS V + +EEL K GV++ A+ EH D+V+K+
Sbjct: 119 IPEAEKTSLAG-------VGAQYDSEVVYHSIQEELVKQGVVYTDFDTALKEHEDIVRKH 171
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
++P D+ +AAL+ AV++ GSFVY+P+GV+ + L +YFR+N G GQFE T+II +
Sbjct: 172 FMKLIPPTDHKFAALHGAVWSGGSFVYVPEGVQVDIPLQSYFRLNAPGAGQFEHTMIIVE 231
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+ V ++EGC+AP+ + LHA VEL D+A + YST++NW +YN T
Sbjct: 232 KGAKVHFIEGCSAPKYNVANLHAGAVELFIGDDATLTYSTIENW-------SKNMYNMNT 284
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR G ++W GS + YP +L+GE + EF + + Q +D+G+K++
Sbjct: 285 KRSIV-GKNGTMNWVTGSFGSHTSCLYPMTILQGEGAHCEFTGVTFAGKGQYLDTGSKVV 343
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A NTTS I SK +S YRG V ++ A +++ C+SL++ + TIP I
Sbjct: 344 HNAPNTTSNIDSKSLSKSGGVCIYRGSVVINEKAEGAKSNVSCESLMLDEISQSDTIPAI 403
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
KN + +L HEA +ISDE ++Y + RG+ E+ A A++V GFV V + LP+E+AVE
Sbjct: 404 VVKNDNIDLGHEAKIGRISDEAVYYLMSRGLSEDEARAMLVRGFVEPVSKALPLEYAVEM 463
Query: 477 QKLIDISLEGSV 488
LI++ L+GS+
Sbjct: 464 NNLINLELKGSL 475
>gi|139439173|ref|ZP_01772625.1| Hypothetical protein COLAER_01635 [Collinsella aerofaciens ATCC
25986]
gi|133775520|gb|EBA39340.1| Hypothetical protein COLAER_01635 [Collinsella aerofaciens ATCC
25986]
Length = 470
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 164/486 (33%), Positives = 264/486 (54%), Gaps = 20/486 (4%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
T ++ D+D+ Y F + ++ G+ DI+R ISAKK+EP WML+ RL + +
Sbjct: 2 TKNRTEVADIDRSLYDFTYGEEGFERLDAGITPDIVREISAKKDEPQWMLDLRLKSLEIF 61
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
DP+W +D D++ Y P + + V ++ T+E+LGIP E+ L
Sbjct: 62 NRFPDPTWGP-SIEGLDMDNIVTYVKPNTEQKHD-WESVPDDIKNTFERLGIPEAERSYL 119
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVPV 183
AG V A +DS V ++ K G+++ I EA+ + L+ + T++P
Sbjct: 120 AG-------VGAQYDSELVYHNMQDTASKMGIVYSGIEEALHDPQWEPLIHEKFMTLIPP 172
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ +AAL+ AV++ GSFVY+PKG + L +YFR+N KG GQFE TLII ++ + + +
Sbjct: 173 TDHKFAALHGAVWSGGSFVYVPKGTKLDFPLQSYFRLNAKGAGQFEHTLIIVEDDADLHF 232
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ + LHA VEL A ++YST++NW +YN TKR
Sbjct: 233 IEGCSAPKYNVANLHAGAVELFVGKRAHLRYSTIENW-------SKNMYNLNTKRARV-D 284
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
I W GS + + YP +L G ++ F I + Q +D+G K++ A +T+
Sbjct: 285 EDGDIEWISGSFGSHVGYLYPMSVLNGRRARSSFTGITFAGAGQNLDTGCKVVLNAPDTS 344
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+ + +KGIS T+R + A S+ C SL++ + + TIP ++ + +
Sbjct: 345 ATVETKGISKSGGIQTFRSSIVATPKAEGSKATVSCQSLMLDDQSRSDTIPAMDIRAKNV 404
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEAT +I D+ +FY + RGI EE A +IVNGF V ++LP+E+AVE LI +
Sbjct: 405 DIGHEATIGRIGDDKVFYLMSRGISEEEARTMIVNGFANPVSKELPLEYAVEMNNLIKLE 464
Query: 484 LEGSVG 489
+EG++G
Sbjct: 465 MEGAIG 470
>gi|222478613|ref|YP_002564850.1| FeS assembly protein SufB [Halorubrum lacusprofundi ATCC 49239]
gi|222451515|gb|ACM55780.1| FeS assembly protein SufB [Halorubrum lacusprofundi ATCC 49239]
Length = 476
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 176/492 (35%), Positives = 276/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D++++ D + ++ F+ + + KGL E+ +R IS K+EP+WMLE RL A
Sbjct: 1 MSSQQDELKETDTEA-RFEFKKEEKSAFQTEKGLTEETVRVISEDKDEPEWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPKSI--VGPQSLDDVDPELLRTYEKLGIP 118
++ M P+ + +D D++ Y P G ++ E+ T++KLGIP
Sbjct: 60 EQFQEMPMPTDWPGQPDLSEVDIDEIIPYIRPDVDVRAGVDDWTELPDEIKDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E+ ++ GVIF + EA+ EH ++V+++
Sbjct: 120 EAEKNALSG-------VGAQYESEVVYQNMQEQWEEKGVIFCNMDEAVREHEEIVREHFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ A+++ GSFVY+P+ M + YFR+N KG GQFE TLIIA+E
Sbjct: 173 TKCVPPSDNKFAALHGAIWSGGSFVYVPENTTVDMPIQAYFRMNSKGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V Y+EGC+AP+ LH+ VE+ ++A ++YSTVQNW YN TK
Sbjct: 233 GSEVHYIEGCSAPKYSAFNLHSGGVEVFVGEDAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R ++ W GS T YPS +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAIA-EKGGRMEWISGSMGSKATMLYPSTILKGRGASDNHITIAFAGEGQDIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A NT S + SK I+ YRG V + GA +S +CD+L+ N + T+PY+E
Sbjct: 345 NAPNTKSTVESKSIAKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNKSTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
S ++ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE
Sbjct: 405 INESKVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+L+++ +EGS+G
Sbjct: 465 RLVELEMEGSLG 476
>gi|227485563|ref|ZP_03915879.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus lactolyticus ATCC 51172]
gi|227236429|gb|EEI86444.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus lactolyticus ATCC 51172]
Length = 470
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 174/481 (36%), Positives = 271/481 (56%), Gaps = 18/481 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
++++ ID Y + F I D KGLN I+ IS KKNEP+WM + RL + +
Sbjct: 8 EQLKDIDRGYYDF-FNEFIYSDITEKGLNAKIVNEISDKKNEPEWMRKRRLKSLEIFEKT 66
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+PSW ++ D+ Y P + + + + ++ T+++LGIP EQE LAG
Sbjct: 67 PNPSWGP-DLSELNMADITTYVKPPTDKK-STWEALPEDIKDTFDRLGIPQAEQESLAG- 123
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A +DS V + ++ L GVIF+ S A+ EH D+VKKY +P + Y
Sbjct: 124 ------VGAQYDSEEVYHSIQKHLSDQGVIFIDFSTAVREHEDIVKKYFQKAIPPTLHKY 177
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AAL+ AV++ GS +Y+P+GV+ + L +Y+R+N G GQFE T+IIA++ S V ++EGC+
Sbjct: 178 AALHGAVWSGGSLIYVPEGVKVDIPLQSYYRLNAPGAGQFEHTMIIAEDNSRVHFIEGCS 237
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP+ + LHA VE+ NAE+++ST++NW +YN TKR + K+
Sbjct: 238 APRYNVVNLHAGSVEIFVGKNAEVRFSTIENW-------SRNMYNLNTKRSIIQ-EGGKM 289
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS ++ YP+ +L GE + E+ I + Q ID+G M+HLA NT S ++
Sbjct: 290 IWVSGSFGSKVSMLYPTSILAGEGARAEYTGITFAGDGQYIDNGCSMIHLAPNTFSTALT 349
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K I+AG + R V++ + + S++ C++L+I + TIP ++ +N + HE
Sbjct: 350 KSITAGNGKSMTRSLVAMRKNSQGSKSTVDCENLMISEESQSDTIPVLDIRNDDVDCGHE 409
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A I +FY + RGIPEE A ++IV GF + + LP+E+AVE LID+ LEG+
Sbjct: 410 AKIGSIDQGQVFYLMSRGIPEEEAKSMIVRGFAEPISKLLPLEYAVEMNNLIDMELEGAN 469
Query: 489 G 489
G
Sbjct: 470 G 470
>gi|199597558|ref|ZP_03210987.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|258508198|ref|YP_003170949.1| Fe-S assembly protein SufB [Lactobacillus rhamnosus GG]
gi|199591581|gb|EDY99658.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|257148125|emb|CAR87098.1| Fe-S assembly protein SufB, SUF system [Lactobacillus rhamnosus GG]
gi|259649515|dbj|BAI41677.1| Fe-S cluster assembly ABC transporter permease component
[Lactobacillus rhamnosus GG]
Length = 478
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 188/495 (37%), Positives = 288/495 (58%), Gaps = 23/495 (4%)
Query: 1 MVAVRETVDK---VRKIDV--DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWM 54
M + T + ID D+ F+ +I+ V +GL ED +R ISA+K+EPDWM
Sbjct: 1 MTETKNTKNNEVVAADIDFLPDENPADFKDDIKPVYSTGRGLTEDTVRAISAEKHEPDWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
L +RL AY + + P++ +D D++ Y+ + +DV + +T+++
Sbjct: 61 LAYRLKAYATYRKLAMPNFGP-DLSDLDLDNMLYFQKATDRT-YRDWEDVPDTIKKTFDR 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P E++ LAG A ++S V ++E +K G+IFM + A+ E+P+LV
Sbjct: 119 LGVPQAERKYLAGAS-------AQYESEVVYHNMRDEFEKLGIIFMDMDSALKEYPELVH 171
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
KY +V DN +AALN AV++ GSF+Y+PKGV+ + + +YFRIN + TGQFERTLII
Sbjct: 172 KYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAENTGQFERTLII 231
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G++V+Y+EGCTAP + LHAAVVE+ ++A +Y+T+QNW +++
Sbjct: 232 VEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNW-------SKNVFSL 284
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
TKR + + W GS T KYPS L G+ + G SIA++ D+G +
Sbjct: 285 ETKRAQAL-DNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDNGAR 343
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A NT+S IVSK I+ YRG V + A ++ +CD++L+ + TIP
Sbjct: 344 MIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSDTIP 403
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E NS+ ++EHEA SK+S+E L+Y + RGI E A +I+ GFV ++LPME+AV
Sbjct: 404 YNEIHNSTVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAV 463
Query: 475 EAQKLIDISLEGSVG 489
E +LI + ++GSVG
Sbjct: 464 ELNRLIGMEMDGSVG 478
>gi|161507128|ref|YP_001577082.1| hypothetical protein lhv_0625 [Lactobacillus helveticus DPC 4571]
gi|160348117|gb|ABX26791.1| hypothetical protein lhv_0625 [Lactobacillus helveticus DPC 4571]
Length = 467
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 188/484 (38%), Positives = 287/484 (59%), Gaps = 19/484 (3%)
Query: 8 VDKVRKIDVDQ-YKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ KV I D+ Y+YGF N++ +GLNE+++R ISA+K+EP WML++RL +++ +
Sbjct: 1 MTKVEDIVKDEDYQYGFHDNVKPKFSTGRGLNEEVVRKISAEKHEPQWMLDYRLKSFKIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M P++ +D D+ YY + + DV ++ T+E+LG+P E++ L
Sbjct: 61 QKMAMPNFGP-DLSGLDLKDMLYYQK-MTDKKYRDWKDVPEDIKETFERLGVPQAERKYL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG A ++S V K++ K G++FM A+ ++P+L KKY +V
Sbjct: 119 AGSA-------AQYESEMVYHNMKKQFDKLGIVFMDTDSALQQYPELFKKYFGKLVKPTS 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N +AALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII D+G+++ Y+E
Sbjct: 172 NKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQFERTLIIVDKGAHLDYVE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAPQ LHAAVVE+ L++A +Y+T+QNW +Y+ TKR G
Sbjct: 232 GCTAPQYSSGSLHAAVVEVNVLNDAYCRYTTIQNW-------SDNVYSLETKRAVA-GAH 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT+S
Sbjct: 284 ATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNTSSS 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK I+ G + YRG V + + S+ +CD++++ + + TIP E N+ +
Sbjct: 344 IVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPTNEINNAHVAM 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEAT SK+SDE L+Y RGIPE A +I+ GFV ++L ME+AVE +LI +E
Sbjct: 404 EHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLSMEYAVELNRLISFQME 463
Query: 486 GSVG 489
G++G
Sbjct: 464 GAIG 467
>gi|116494679|ref|YP_806413.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei ATCC 334]
gi|116104829|gb|ABJ69971.1| Iron-regulated ABC transporter membrane component SufB
[Lactobacillus casei ATCC 334]
Length = 478
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 185/495 (37%), Positives = 286/495 (57%), Gaps = 23/495 (4%)
Query: 1 MVAVRETVDK---VRKIDV--DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWM 54
M + T + ID + F+ +I+ V +GL E+ +R ISA+K+EPDWM
Sbjct: 1 MTETKNTKNNETVAADIDFLPEDNPADFKDDIKPVYSTGRGLTEETVRAISAEKHEPDWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
L++RL AY + + P++ +D D++ Y+ + DDV + T+++
Sbjct: 61 LDYRLRAYATYKRLAMPNFGP-DLSDLDLDNMLYFQKATDRT-YRDWDDVPDAIKNTFDR 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P E++ LAG A ++S V ++E +K G+IFM + A+ E+P+LV
Sbjct: 119 LGVPQAERKYLAGAS-------AQYESEVVYHNMRDEFEKLGIIFMDMDSALKEYPELVH 171
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
Y +V DN +AALN AV++ GSF+Y+PKGV+ + + +YFRIN + TGQFERTLII
Sbjct: 172 DYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAENTGQFERTLII 231
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G++V+Y+EGCTAP + LHAAVVE+ ++A +Y+T+QNW +++
Sbjct: 232 VEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNW-------SKNVFSL 284
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
TKR + + W GS T KYPS L G+ + G SIA++ D+G +
Sbjct: 285 ETKRAQAL-DNATMEWVDGNLGSKTTMKYPSVYLDGKGARGTMLSIAVAGEGVDQDNGAR 343
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A NT+S IVSK I+ YRG V + A ++ +CD++L+ + TIP
Sbjct: 344 MIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSDTIP 403
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E N++ ++EHEA SK+S+E L+Y + RGI E A +I+ GFV ++LPME+AV
Sbjct: 404 YNEIHNATVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAV 463
Query: 475 EAQKLIDISLEGSVG 489
E +LI + ++GSVG
Sbjct: 464 ELNRLIGMEMDGSVG 478
>gi|282856553|ref|ZP_06265827.1| FeS assembly protein SufB [Pyramidobacter piscolens W5455]
gi|282585619|gb|EFB90913.1| FeS assembly protein SufB [Pyramidobacter piscolens W5455]
Length = 472
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 167/490 (34%), Positives = 272/490 (55%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A++E V +D +Y + F+ K +GL I+ ISA+KN+P WM E+RL
Sbjct: 1 MSAMKE-KTYVEDVDRSRYDFRFDGK-DAYKVEEGLTAGIVGQISAEKNDPPWMREFRLE 58
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + + + P W + +++ Y P + + DDV ++ T+E+LGIP
Sbjct: 59 ALKIYDELALPDWGP-SLDGLRMENIVTYVRPNTERMHANWDDVPADIKDTFERLGIPQA 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD-LVKKYLST 179
E++ LAG V A +DS V K E+ GV++ + A+ +++++
Sbjct: 118 ERKSLAG-------VGAQYDSELVYHNVKAEVAAQGVVYTDLESALRGPYARMIEEHFMK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP D+ +AAL+ AV++ GSFVY+P V+ + L +YFR+N G GQFE TLII EG+
Sbjct: 171 LVPPRDHKFAALHGAVWSGGSFVYVPPRVKVEIPLQSYFRLNAPGAGQFEHTLIILGEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ ++EGC+AP+ + LHA VEL NA ++YST++NW +YN TKR
Sbjct: 231 DLHFIEGCSAPKYNVANLHAGCVELFVGKNARLRYSTIENW-------SKNMYNLNTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ W GS +++ YP +L G+ + EF + + Q +D+G K++H A
Sbjct: 284 VV-EEGGVMEWVSGSFGSHVSYLYPMTILNGDGARMEFTGVTFAGRGQNLDTGMKVVHAA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S + ++ IS +T+R V V+ A +++ C SL++ + TIP +E +
Sbjct: 343 PSTSSYVNTRSISKDGGVSTFRSAVVVNAAAKRAKSSVSCQSLMLDALSRSDTIPAMEIR 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA +ISDE +FY + RGIPE+ A A+IV+GF V ++LP+E+AVE L
Sbjct: 403 TPDADVGHEAKIGRISDESVFYLMSRGIPEDEARAMIVSGFADNVSKELPLEYAVEMNNL 462
Query: 480 IDISLEGSVG 489
I + ++GS+G
Sbjct: 463 IRLEMKGSIG 472
>gi|191638179|ref|YP_001987345.1| ABC transporter-associated protein [Lactobacillus casei BL23]
gi|239631718|ref|ZP_04674749.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066240|ref|YP_003788263.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus casei
str. Zhang]
gi|190712481|emb|CAQ66487.1| ABC transporter-associated protein [Lactobacillus casei BL23]
gi|239526183|gb|EEQ65184.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438647|gb|ADK18413.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei str. Zhang]
gi|327382210|gb|AEA53686.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Lactobacillus casei LC2W]
gi|327385407|gb|AEA56881.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Lactobacillus casei BD-II]
Length = 478
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 185/495 (37%), Positives = 286/495 (57%), Gaps = 23/495 (4%)
Query: 1 MVAVRETVDK---VRKIDV--DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWM 54
M + T + ID + F+ +I+ V +GL E+ +R ISA+K+EPDWM
Sbjct: 1 MTETKNTKNNETVAADIDFLPEDNPADFKDDIKPVYSTGRGLTEETVRAISAEKHEPDWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
L++RL AY + + P++ +D D++ Y+ + DDV + T+++
Sbjct: 61 LDYRLRAYATYKRLAMPNFGP-DLSDLDLDNMLYFQKATDRT-YRDWDDVPDAIKNTFDR 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P E++ LAG A ++S V ++E +K G+IFM + A+ E+P+LV
Sbjct: 119 LGVPQAERKYLAGAS-------AQYESEVVYHNMRDEFEKLGIIFMDMDSALKEYPELVH 171
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
Y +V DN +AALN AV++ GSF+Y+PKGV+ + + +YFRIN + TGQFERTLII
Sbjct: 172 DYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAENTGQFERTLII 231
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G++V+Y+EGCTAP + LHAAVVE+ ++A +Y+T+QNW +++
Sbjct: 232 VEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNW-------SKNVFSL 284
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
TKR + + W GS T KYPS L G+ + G SIA++ D+G +
Sbjct: 285 ETKRAQAL-DNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDNGAR 343
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A NT+S IVSK I+ YRG V + A ++ +CD++L+ + TIP
Sbjct: 344 MIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSDTIP 403
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E N++ ++EHEA SK+S+E L+Y + RGI E A +I+ GFV ++LPME+AV
Sbjct: 404 YNEIHNATVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAV 463
Query: 475 EAQKLIDISLEGSVG 489
E +LI + ++GSVG
Sbjct: 464 ELNRLIGMEMDGSVG 478
>gi|229551999|ref|ZP_04440724.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus rhamnosus LMS2-1]
gi|258539413|ref|YP_003173912.1| Fe-S assembly protein SufB [Lactobacillus rhamnosus Lc 705]
gi|229314648|gb|EEN80621.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus rhamnosus LMS2-1]
gi|257151089|emb|CAR90061.1| Fe-S assembly protein SufB, SUF system [Lactobacillus rhamnosus Lc
705]
gi|328463478|gb|EGF35128.1| Fe-S assembly protein SufB [Lactobacillus rhamnosus MTCC 5462]
Length = 478
Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 187/495 (37%), Positives = 288/495 (58%), Gaps = 23/495 (4%)
Query: 1 MVAVRETVDK---VRKIDV--DQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWM 54
M + T + ID D+ F+ +I+ V +GL ED +R ISA+K+EPDWM
Sbjct: 1 MTETKNTKNNEVVAADIDFLPDENPADFKDDIKPVYSTGRGLTEDTVRAISAEKHEPDWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
L +RL AY + + P++ +D D++ Y+ + +DV + +T+++
Sbjct: 61 LAYRLKAYATYRKLAMPNFGP-DLSDLDLDNMLYFQKATDRT-YRDWEDVPDTIKKTFDR 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P E++ LAG A ++S V ++E +K G+IFM + A+ E+P+LV
Sbjct: 119 LGVPQAERKYLAGAS-------AQYESEVVYHNMRDEFEKLGIIFMDMDSALKEYPELVH 171
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+Y +V DN +AALN AV++ GSF+Y+PKGV+ + + +YFRIN + TGQFERTLII
Sbjct: 172 EYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAENTGQFERTLII 231
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G++V+Y+EGCTAP + LHAAVVE+ ++A +Y+T+QNW +++
Sbjct: 232 VEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNW-------SKNVFSL 284
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
TKR + + W GS T KYPS L G+ + G SIA++ D+G +
Sbjct: 285 ETKRAQAL-DNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDNGAR 343
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A NT+S IVSK I+ YRG V + A ++ +CD++L+ + TIP
Sbjct: 344 MIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSDTIP 403
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E NS+ ++EHEA SK+S+E L+Y + RGI E A +I+ GFV ++LPME+AV
Sbjct: 404 YNEIHNSTVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAV 463
Query: 475 EAQKLIDISLEGSVG 489
E +LI + ++GSVG
Sbjct: 464 ELNRLIGMEMDGSVG 478
>gi|284164781|ref|YP_003403060.1| FeS assembly protein SufB [Haloterrigena turkmenica DSM 5511]
gi|284014436|gb|ADB60387.1| FeS assembly protein SufB [Haloterrigena turkmenica DSM 5511]
Length = 476
Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 182/492 (36%), Positives = 280/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D + ++ F+ ++ KGL E++IR IS K+EPDWMLE RL A
Sbjct: 1 MSSDQDHLKETDTEA-RFEFKKEENSAVRSGKGLTEEVIRMISEDKDEPDWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIP 118
++ M PS +D +++ Y P G ++ E+ T++KLGIP
Sbjct: 60 EQYQNMPMPSGWPGMPDLSELDVEEIIPYIRPDVDKREGVDDWTELPDEIKDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E+ ++ GVIF + +A+ +HP+LVK++
Sbjct: 120 EAEKNALSG-------VGAQYESEVVYQNMQEQWEEKGVIFCNMDKAVQDHPELVKEHFM 172
Query: 179 T-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
T VP DN +AAL+ AV++ GSFVY+P+ V M + YFR+N +G GQFE TLIIA+E
Sbjct: 173 TTCVPPSDNKFAALHGAVWSGGSFVYVPEDVTVEMPVQAYFRMNSEGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V Y+EGC+AP+ + LH+ VE+ ++A ++YSTVQNW +N TK
Sbjct: 233 GSEVHYIEGCSAPKYGTHNLHSGGVEVFVGEDAHVQYSTVQNW-------SKNTFNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C + W GS +T YP +L+G S +IA++ Q ID+G K+ H
Sbjct: 286 RAIC-EENGTMEWVSGSMGSKVTMLYPCTILKGRGSTDTHITIALAGEGQDIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A T+S I SK I+ YRG V + GA +S +CD+L+ N + T+PY+E
Sbjct: 345 NAPETSSTIESKSIAKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ S ++ HEAT KI DE +FY RG+ ++ A +IV GF+ + ++LP+E+AVE
Sbjct: 405 IEESKVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKKMIVAGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGS+G
Sbjct: 465 RLIELEMEGSLG 476
>gi|33519819|ref|NP_878651.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Blochmannia floridanus]
gi|33504164|emb|CAD83426.1| ABC transporter sufB; involved in Fe-S cluster assembly, permease
compound [Candidatus Blochmannia floridanus]
Length = 500
Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 265/489 (54%), Positives = 354/489 (72%), Gaps = 23/489 (4%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
YK GF T ++ ++ +G+NE +IR IS K++EP+WML++RL Y+ W+ M++P W +
Sbjct: 20 NSYYKEGFFTQLKNEEFAQGINEKVIRNISEKRSEPEWMLKFRLSGYKAWINMQEPHWLK 79
Query: 76 IRYPAIDFDDLYYYAAPK--------------SIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y +D++ YY+AP+ + + E+ +T+ KLGIP+ +
Sbjct: 80 GHYHNLDYNSYSYYSAPEYSTHNQSEKQEKKLDHTISKKSPFLTKEVEKTFNKLGIPVND 139
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
VA+DA+FDSVSV TTF+ L K G+IF +++AI ++P+LV+KYL TVV
Sbjct: 140 --------IGNVAIDAIFDSVSVSTTFRNTLLKKGIIFCSLNDAIHDYPNLVRKYLGTVV 191
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
DNF+AALN+AV +DG+F+YIPK VRCPMELSTYFRIN K TGQFERT++IAD GSYV
Sbjct: 192 SYKDNFFAALNAAVVSDGTFIYIPKNVRCPMELSTYFRINSKKTGQFERTILIADSGSYV 251
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD-SQGKGGIYNFVTKRGD 300
SY+EGC+AP + QLHAAVVE++ L NA++KYST+QNW+ G +GGI NFVTKR
Sbjct: 252 SYIEGCSAPAHNNYQLHAAVVEVIVLKNAQVKYSTIQNWFSGHSKNSQGGILNFVTKRAL 311
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C +K+SWTQ E+GSAITWKYPS +L+G+ S GEF+S+AI+NG QQ D+GTKM+H+ +
Sbjct: 312 CAEENAKMSWTQSESGSAITWKYPSVILKGKNSVGEFFSVAITNGIQQADTGTKMIHIGE 371
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
N+ S I+SKGIS G S NTYRG V + A H+RNFTQCDS+LIG CGAHT P IES N
Sbjct: 372 NSRSTIISKGISIGNSQNTYRGLVKILPTATHARNFTQCDSMLIGKKCGAHTFPNIESHN 431
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ +EHEATTSKISD LFYC QRGI E+ AI++IVNGF +++ LP+EF+VEAQKL+
Sbjct: 432 NTAQVEHEATTSKISDNQLFYCRQRGITEDNAISMIVNGFCKDIFSALPLEFSVEAQKLL 491
Query: 481 DISLEGSVG 489
+I+LE SVG
Sbjct: 492 EITLEHSVG 500
>gi|227535336|ref|ZP_03965385.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187070|gb|EEI67137.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 478
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 185/495 (37%), Positives = 285/495 (57%), Gaps = 23/495 (4%)
Query: 1 MVAVR-----ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWM 54
M + ETV + F+ +I+ V +GL E+ +R ISA+K+EPDWM
Sbjct: 1 MTETKNTKNNETVAAYIDFLPEDNPADFKDDIKPVYSTGRGLTEETVRAISAEKHEPDWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
L++RL AY + + P++ +D D++ Y+ + DDV + T+++
Sbjct: 61 LDYRLRAYATYKRLAMPNFGP-DLSDLDLDNMLYFQKATDRT-YRDWDDVPDAIKNTFDR 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LG+P E++ LAG A ++S V ++E +K G+IFM + A+ E+P+LV
Sbjct: 119 LGVPQAERKYLAGAS-------AQYESEVVYHNMRDEFEKLGIIFMDMDSALKEYPELVH 171
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
Y +V DN +AALN AV++ GSF+Y+PKGV+ + + +YFRIN + TGQFERTLII
Sbjct: 172 DYFGKLVKPSDNKFAALNGAVWSGGSFIYVPKGVQTDVPIQSYFRINAENTGQFERTLII 231
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G++V+Y+EGCTAP + LHAAVVE+ ++A +Y+T+QNW +++
Sbjct: 232 VEPGAHVNYVEGCTAPNYSSDSLHAAVVEVFVKNDAYCRYTTIQNW-------SKNVFSL 284
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
TKR + + W GS T KYPS L G+ + G SIA++ D+G +
Sbjct: 285 ETKRAQAL-DNATMEWVDGNLGSKTTMKYPSVYLDGKGAHGTMLSIAVAGEGVDQDNGAR 343
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H A NT+S IVSK I+ YRG V + A ++ +CD++L+ + TIP
Sbjct: 344 MIHNAPNTSSSIVSKSIAKDGGAVDYRGTVRFTKKADNAFCHVECDTILMDEKSSSDTIP 403
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E N++ ++EHEA SK+S+E L+Y + RGI E A +I+ GFV ++LPME+AV
Sbjct: 404 YNEIHNATVSMEHEAKVSKVSEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAV 463
Query: 475 EAQKLIDISLEGSVG 489
E +LI + ++GSVG
Sbjct: 464 ELNRLIGMEMDGSVG 478
>gi|76802149|ref|YP_327157.1| Fe-S cluster assembly protein ABC transporter permease
[Natronomonas pharaonis DSM 2160]
gi|76558014|emb|CAI49599.1| ABC-type transport system permease protein (probable Fe-S cluster
assembly protein) 3 [Natronomonas pharaonis DSM 2160]
Length = 476
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 182/492 (36%), Positives = 277/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D ++ D + ++ F+ K KGL E+ IR IS K+EP+WMLE RL A
Sbjct: 1 MSSEEDHLKDTDTEA-RFEFKKEESSAFKTEKGLTEETIRVISEDKDEPEWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIP 118
++ M P+ + +D D++ Y P + G + +D+ E+ T++KLGIP
Sbjct: 60 EQFQQMPMPTDWPGQPDLSEVDIDEIVPYIRPDIEARGGAEEWEDLPEEIQDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E ++ GVIF + +A+ EHP+LV++Y
Sbjct: 120 EAEKNALSG-------VGAQYESEVVYQNMQERWEEKGVIFCNMDKAVQEHPELVREYFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ A+++ GSFVYIP+GV M + YFR+N +G GQFE TLIIA+E
Sbjct: 173 TKCVPPSDNKFAALHGAIWSGGSFVYIPEGVTVEMPVQAYFRMNSEGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S V Y+EGC+AP+ LH+ VE+ + A ++YSTVQNW YN TK
Sbjct: 233 NSEVHYIEGCSAPKYSAFNLHSGGVEVFVKEGAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R + + W GS T YPS +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAIA-ERDATMEWVSGSMGSKATMLYPSTILKGPGATDNHITIAFAGEGQNIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A NT S + SK ++ YRG V + GA +S +CD+L+ N + T+PY+E
Sbjct: 345 NAPNTKSTVESKSVAKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ S ++ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE
Sbjct: 405 IEESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGS+G
Sbjct: 465 RLIELEMEGSLG 476
>gi|307244473|ref|ZP_07526582.1| FeS assembly protein SufB [Peptostreptococcus stomatis DSM 17678]
gi|306492166|gb|EFM64210.1| FeS assembly protein SufB [Peptostreptococcus stomatis DSM 17678]
Length = 474
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 176/490 (35%), Positives = 275/490 (56%), Gaps = 17/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M RE + + + D+ Y + + K KGL E+I+ IS +KNEP WML+ RL
Sbjct: 1 METKRENKKRTQIEEQDRGIYDIKNEFKYKSKTEKGLTEEIVTQISKEKNEPQWMLDIRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ +++ +K+P+W ++ DD+ Y P + + + ++V ++ T++ LGIP
Sbjct: 61 ASLKKFYELKNPTWGP-NLDEVNIDDITTYIRPDADL-VEDWEEVPEDIKNTFDLLGIPE 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+E + V A +DS V ++ L GVI+ A+ E+P++V+KY
Sbjct: 119 AERE------NNLSGVGAQYDSEVVYHKMQQHLLDQGVIYTDFESAVREYPEIVQKYFMK 172
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+ D+ YAAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII +EG+
Sbjct: 173 CISNADHKYAALHYAVWSGGSFVYVPKGVNVDVPLQSYFRLNAPGAGQFEHTLIIIEEGA 232
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
Y ++EGC+AP+ + +HA VEL + A ++YST++NW +YN TKR
Sbjct: 233 YCHFIEGCSAPKYNVVNIHAGAVELFVQEGATLRYSTIENW-------SRNMYNLNTKRA 285
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ I W GS ++ YP +LRGE + EF I + Q +D+GTK++H A
Sbjct: 286 IVEKDGA-IEWVSGSFGSKVSCLYPMSVLRGENARSEFTGITFAGRDQYLDTGTKVVHAA 344
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S + SK IS YRG V V + A S++ C+SL++ + TIP I+
Sbjct: 345 PNTSSTVNSKSISKDGGVAIYRGLVKVTKNAKGSKSTVSCESLMLDQESRSDTIPVIDIA 404
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+L HEA +I DE +FY + RGI E A +++V GF + ++LP+E+AVE L
Sbjct: 405 TQDVDLGHEAKIGRIDDEVIFYLMSRGISEAEAKSMVVRGFAEPIAKELPLEYAVEMNNL 464
Query: 480 IDISLEGSVG 489
I++ LEG++G
Sbjct: 465 INLELEGTIG 474
>gi|257067125|ref|YP_003153381.1| FeS assembly protein SufB [Anaerococcus prevotii DSM 20548]
gi|256799005|gb|ACV29660.1| FeS assembly protein SufB [Anaerococcus prevotii DSM 20548]
Length = 470
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 179/481 (37%), Positives = 274/481 (56%), Gaps = 18/481 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D+++++D Y + F D KG+N DI+ IS KKNEPDWM RL + + +
Sbjct: 8 DQLKELDRGYYDF-FNEFEYADITDKGINADIVNEISKKKNEPDWMRRRRLKSLALFEKI 66
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+PSW ++ DD+ Y PKS + + E+ T+++LGIP EQE LAG
Sbjct: 67 DNPSWGP-DLSELNMDDITTYVKPKSDKKSN-WEALPEEIRDTFDRLGIPQAEQESLAG- 123
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A +DS V + ++ L GVIFM S A+ EH D+VK Y +P + Y
Sbjct: 124 ------VGAQYDSEEVYHSIQKHLSDQGVIFMDFSSALREHEDIVKAYFQKAIPPTLHKY 177
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AAL+ AV++ GS +Y+P+GV + L +Y+R+N G GQFE T+IIA++ + V ++EGC+
Sbjct: 178 AALHGAVWSGGSLIYVPEGVEVDIPLQSYYRLNAPGAGQFEHTMIIAEDNAKVHFIEGCS 237
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP+ + LHA VE+ NAE+++ST++NW +YN TKR + K+
Sbjct: 238 APRYNVVNLHAGSVEIFVGKNAEVRFSTIENW-------SRNMYNLNTKRAIVQ-EGGKV 289
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS ++ YP+ +L GE + E+ I ++ Q ID+G M+HLA NT S ++
Sbjct: 290 IWVSGSFGSKVSMLYPTSVLAGEGASAEYTGITFASNGQYIDNGCSMIHLAPNTYSTALT 349
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K I+AG + R V + + +A SR+ C++L+I + TIP ++ +N + HE
Sbjct: 350 KSITAGAGKSMTRSLVQMKKNSAGSRSTVDCENLMISEESQSDTIPVLDIRNDDVDCGHE 409
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A I +FY + RGIPEE A ++IV GF + ++LP+E+AVE +LID+ LEG+
Sbjct: 410 AKIGSIDQGQIFYLMSRGIPEEEAKSMIVRGFAEPISRELPLEYAVEMNRLIDMELEGAN 469
Query: 489 G 489
G
Sbjct: 470 G 470
>gi|260102727|ref|ZP_05752964.1| FeS assembly protein SufB [Lactobacillus helveticus DSM 20075]
gi|111610269|gb|ABH11636.1| putative iron-regulated ABC transporter component ABC1MC1
[Lactobacillus helveticus CNRZ32]
gi|260083466|gb|EEW67586.1| FeS assembly protein SufB [Lactobacillus helveticus DSM 20075]
Length = 467
Score = 458 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 188/484 (38%), Positives = 285/484 (58%), Gaps = 19/484 (3%)
Query: 8 VDKVRKIDVDQ-YKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ KV I D+ Y+YGF N++ +GLNE ++R ISA+K+EP WML++RL +++ +
Sbjct: 1 MTKVEDIVKDEDYQYGFHDNVKPKFSTGRGLNEKVVRKISAEKHEPQWMLDYRLKSFKIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M P++ +D D+ YY + + DV ++ T+E+LG+P E++ L
Sbjct: 61 QKMAMPNFGP-DLSGLDLKDMLYYQK-MTDKKYRDWKDVPEDIKETFERLGVPQAERKYL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG A ++S V K++ K G++FM A+ ++P+L KKY +V
Sbjct: 119 AGSA-------AQYESEMVYHNMKKQFDKLGIVFMDTDSALQQYPELFKKYFGKLVKPTS 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N +AALN AV++ G+F+Y+PKGV+ P + YFR+N + +GQFERTLII D+G+++ Y+E
Sbjct: 172 NKFAALNGAVWSGGTFIYVPKGVKVPTPVQAYFRLNAENSGQFERTLIIVDKGAHLDYVE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GCTAPQ LHAAVVE+ L +A +Y+T+QNW +Y+ TKR G
Sbjct: 232 GCTAPQYSSGSLHAAVVEVNVLSDAYCRYTTIQNW-------SDNVYSLETKRAVA-GAH 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W G+ +T KYPS L GE + G SIA+++ DSG M H A NT+S
Sbjct: 284 ATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHHGIHQDSGAGMFHNAPNTSSS 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK I+ G + YRG V + + S+ +CD++++ + + TIP E N+ +
Sbjct: 344 IVSKSIAKGGGSTDYRGSVKFAKNSDGSKAHVECDTIIMDDQSSSDTIPTNEINNAHVAM 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEAT SK+SDE L+Y RGIPE A +I+ GFV ++L ME+AVE +LI +E
Sbjct: 404 EHEATVSKVSDEELYYLESRGIPERKATEMIIMGFVEPFTKQLSMEYAVELNRLISFQME 463
Query: 486 GSVG 489
G++G
Sbjct: 464 GAIG 467
>gi|313127093|ref|YP_004037363.1| iron-regulated ABC transporter membrane component sufb
[Halogeometricum borinquense DSM 11551]
gi|312293458|gb|ADQ67918.1| Iron-regulated ABC transporter membrane component SufB
[Halogeometricum borinquense DSM 11551]
Length = 476
Score = 458 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 179/492 (36%), Positives = 275/492 (55%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D + ++ F+ +A KGL E+ IR IS K+EP+WML+ RL A
Sbjct: 1 MSSDQDHLKETDTEA-RFEFKKEQKSSFQADKGLTEETIRVISEDKDEPEWMLKRRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIP 118
+++ M P+ + +D D++ Y P + G D+ ++ T++KLGIP
Sbjct: 60 KQFQKMPMPTDWPGQPDLSEVDVDEIVPYIRPDVETRGGVDDWTDLPDDIKDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E ++ GVIF + +A+ EH +LVK Y
Sbjct: 120 EAEKNALSG-------VGAQYESEVVYQNMQERWEEKGVIFCNMDKAVQEHEELVKDYFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ A+++ GSFVY+P+ M + YFR+N +G GQFE TLIIA+E
Sbjct: 173 TKCVPPSDNKFAALHGAIWSGGSFVYVPEDTTVDMPVQAYFRMNSEGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V Y+EGC+AP+ LH+ VE+ ++A ++YSTVQNW YN TK
Sbjct: 233 GSEVHYIEGCSAPKYSAFNLHSGGVEVFVGEDAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R ++ W GS T YP +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAIV-EKNGRMEWISGSMGSKATMLYPCSILKGRGASDNHITIAFAGEGQNIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A NT S I SK IS YRG V + GA +S +CD+L+ N + T+PY+E
Sbjct: 345 NAPNTKSTIESKSISKDGGRTNYRGLVHISEGAENSSTAVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
S+ ++ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE
Sbjct: 405 INESTVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+L+++ +EGS+G
Sbjct: 465 RLVELEMEGSLG 476
>gi|269123898|ref|YP_003306475.1| FeS assembly protein SufB [Streptobacillus moniliformis DSM 12112]
gi|268315224|gb|ACZ01598.1| FeS assembly protein SufB [Streptobacillus moniliformis DSM 12112]
Length = 471
Score = 458 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 186/486 (38%), Positives = 283/486 (58%), Gaps = 18/486 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
ET K D+++ Y + ++ KGL+E++++ IS KKNEP+WMLE RL A +
Sbjct: 2 ETTKKTYIADIERGIYDVKDEMKHKFTTGKGLDENVVKRISEKKNEPEWMLEKRLHALKI 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ P+W+ +D +++ +Y +S S +DV + +T+++LGIP E++
Sbjct: 62 FFEKPMPTWS-TDLSDLDINEIVHYLETESENMNSSWEDVPEYIKKTFDRLGIPEAEKKS 120
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + EELK GVI+ I AI EH +L+KKY T++
Sbjct: 121 LAG-------VGAQYDSNVVYHSLNEELKSKGVIYTDIETAIVEHEELIKKYFMTLIKPE 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV+ L +YFR+N +GQFE TLII +EG+ + ++
Sbjct: 174 DHKFAALHGAVWSGGSFVYVPKGVKIEKPLQSYFRLNASESGQFEHTLIIVEEGAELHFI 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ N LHA VEL NA+++YST++NW +YN TKR
Sbjct: 234 EGCSAPKYYRNALHAGAVELFVAKNAKLRYSTIENW-------SKNLYNLNTKRAIV-EE 285
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS +T YP +L G + EF + + Q +D+G K++H A TTS
Sbjct: 286 HGTIEWISGSFGSRVTNLYPMSILNGVGASCEFTGVTFAAAGQFLDTGCKIVHAAPYTTS 345
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN-CGAHTIPYIESKNSSC 423
+ SK IS YR + V GA H + +C+SL++ NN +HT+P IE
Sbjct: 346 NVSSKSISKNGGGAFYRSLLKVVPGAHHCKATAECESLMLDNNGSASHTMPIIEVNTDDI 405
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEA+ +ISDE +FY + RG+ E+ A +I+ GFV + ++LP+E+AVE KLI++
Sbjct: 406 DIGHEASIGRISDEAIFYLMSRGLSEDEAKLMIIRGFVEPISKELPLEYAVELNKLIELE 465
Query: 484 LEGSVG 489
LEG++G
Sbjct: 466 LEGTIG 471
>gi|15789748|ref|NP_279572.1| hypothetical protein VNG0525C [Halobacterium sp. NRC-1]
gi|169235464|ref|YP_001688664.1| sufB domain-containing protein [Halobacterium salinarum R1]
gi|10580126|gb|AAG19052.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726530|emb|CAP13315.1| sufB domain protein [Halobacterium salinarum R1]
Length = 474
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 179/487 (36%), Positives = 279/487 (57%), Gaps = 22/487 (4%)
Query: 9 DKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ ++ D + ++ F+ ++ KGL E+ IR IS K+EPDWML+ RL A ++
Sbjct: 4 EDIQDTDTEA-RFEFKKEENSAFESEKGLTEETIRVISEDKDEPDWMLDRRLRALEQYTK 62
Query: 68 MKDPS--WARIRYPAIDFDDLYYYAAPKSIV--GPQSLDDVDPELLRTYEKLGIPIREQE 123
M P+ + +D +++ Y P G +D+ E+ T+E+LGIP E+
Sbjct: 63 MPMPTDWPGQPDLTELDIEEIVPYIRPDVDKRSGADEWEDLPDEIQDTFEQLGIPEAERN 122
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVP 182
L+G V A ++S V +E ++ GV+F + EA+ E+P+LVK++ + VP
Sbjct: 123 ALSG-------VGAQYESEVVYQNMQERWEEKGVVFCNMDEAVQEYPELVKEHFMTSCVP 175
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN +AAL+ AV++ GSFVY+P+ V M + YFR+N +G GQFE TLIIA+EGS V
Sbjct: 176 PSDNKFAALHGAVWSGGSFVYVPEDVTVNMPVQAYFRMNSEGMGQFEHTLIIAEEGSEVH 235
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGC+AP+ + LH+ VE+ ++A ++YSTVQNW +N TKR
Sbjct: 236 YIEGCSAPKYGSHNLHSGGVEVFVGEDAHVQYSTVQNW-------SKNTFNLNTKRAVVE 288
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + W GS T YPS +L+G + +IA + Q ID+G K+ H A +T
Sbjct: 289 G-NGTMEWVSGSMGSKATMLYPSTILKGRGATDNHITIAFAGDGQDIDTGAKVYHNAPDT 347
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I SK I+ YRG V + GA S+ +CD+L+ N+ + T+PY+E S
Sbjct: 348 SSTIESKSIAKDGGRTNYRGLVHIADGAEDSKTNVECDALMFDNDSTSDTMPYMEINESK 407
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE +LI++
Sbjct: 408 VDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELNRLIEL 467
Query: 483 SLEGSVG 489
+EGS+G
Sbjct: 468 EMEGSLG 474
>gi|210632888|ref|ZP_03297587.1| hypothetical protein COLSTE_01494 [Collinsella stercoris DSM 13279]
gi|210159356|gb|EEA90327.1| hypothetical protein COLSTE_01494 [Collinsella stercoris DSM 13279]
Length = 470
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 167/485 (34%), Positives = 263/485 (54%), Gaps = 20/485 (4%)
Query: 8 VDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
++ D+D+ Y F + ++ GL +I+R IS +KNEP WMLE RL + +
Sbjct: 3 KNRTEVADIDRSLYDFSYGEEGFERLDAGLTPEIVREISERKNEPAWMLERRLKSLEIYH 62
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
+P+W +D D + Y P + D V ++ T+E+LGIP E+ LA
Sbjct: 63 KTPNPTWGP-GIDGLDMDHIVTYVKPNTSQK-NDWDSVPDDIKNTFERLGIPEAERSYLA 120
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC--EHPDLVKKYLSTVVPVG 184
G V A +DS V ++ K G+++ I EA+ E L+ + T++P
Sbjct: 121 G-------VGAQYDSELVYHNMQDTAAKMGIVYSGIEEALQVPEWEALIHEKFMTLIPPT 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV+ L +YFR+N G GQFE TLII ++ + + ++
Sbjct: 174 DHKFAALHGAVWSGGSFVYVPKGVKLDFPLQSYFRLNAAGAGQFEHTLIIVEDDADLHFI 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL A ++YST++NW +YN TKR C
Sbjct: 234 EGCSAPKYNVANLHAGAVELFVGKRAHLRYSTIENW-------SKNMYNLNTKRARC-EE 285
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+I W GS + + YP +L G +S F I + Q +D+G K++ A +TT+
Sbjct: 286 EGEIEWISGSFGSHVGYLYPMSVLSGCKSRSSFTGITFAGAGQNLDTGCKVVLGAPDTTA 345
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ +K IS G +T+R + A S C SL++ + + TIP ++ + + +
Sbjct: 346 TVETKSISKGGGISTFRSSIVATPAAEGSAASVSCQSLMLDDISRSDTIPAMDIRAKNVD 405
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT +I D+ +FY + RGI EE A +IVNGF V ++LP+E+AVE LI + +
Sbjct: 406 IGHEATIGRIGDDKIFYLMSRGISEEEARTMIVNGFANPVSKELPLEYAVEMNNLIKLEM 465
Query: 485 EGSVG 489
EG++G
Sbjct: 466 EGAIG 470
>gi|76801401|ref|YP_326409.1| Fe-S cluster assembly protein ABC transporter permease
[Natronomonas pharaonis DSM 2160]
gi|76557266|emb|CAI48842.1| ABC-type transport system permease protein (probable Fe-S cluster
assembly protein) 1 [Natronomonas pharaonis DSM 2160]
Length = 476
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 183/492 (37%), Positives = 276/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D + ++ F+ K KGL E+ IR IS K+EP+WMLE RL A
Sbjct: 1 MSSEEDHIKETDTEA-RFEFKKEESSAFKTEKGLTEETIRVISEDKDEPEWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIP 118
++ M P+ + +D D++ Y P + G + +D+ E+ T++KLGIP
Sbjct: 60 EQFQQMPMPTDWPGQPDLSDVDIDEIVPYIRPDIEARGGAEEWEDLPEEIQDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E+ ++ GVIFM + +A+ EHP+LV++Y
Sbjct: 120 EAEKNALSG-------VGAQYESEIVYQNMQEQWEEKGVIFMDMDKAVQEHPELVREYFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ A+++ GSFVY+P+GV M + YFR+N + GQFE TLIIA+E
Sbjct: 173 TKCVPPSDNKFAALHGAIWSGGSFVYVPEGVTVEMPIQAYFRMNSENMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S V Y+EGC+AP+ LH+ VE+ + A ++YSTVQNW YN TK
Sbjct: 233 NSEVHYIEGCSAPKYSAFNLHSGGVEVFVKEGAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R + W GS T YP +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAIV-EKDGTMEWVSGSMGSKATMLYPCTILKGPGATDNHITIAFAGEGQDIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A NT S I SK IS YRG V + GA S +CD+L+ N + T+PY+E
Sbjct: 345 NAPNTKSTIESKSISKDGGRTNYRGLVHIADGAEGSSTAVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ S ++ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE
Sbjct: 405 IEESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGS+G
Sbjct: 465 RLIELEMEGSLG 476
>gi|77414656|ref|ZP_00790793.1| Unknown [Streptococcus agalactiae 515]
gi|77159298|gb|EAO70472.1| Unknown [Streptococcus agalactiae 515]
Length = 449
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 197/467 (42%), Positives = 278/467 (59%), Gaps = 19/467 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + E V+ + ID+ +YK+GF +++ + KGLNE +IR +SA K EP+WML++RL
Sbjct: 1 MSEINEKVE-PQPIDLGEYKFGFHDDVKPIYSTGKGLNEAVIRELSAAKGEPEWMLDFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M +W IDFDD+ YY + DDV ++ T+E++GIP
Sbjct: 60 KSLETFNKMPMQTWG-ADLSDIDFDDIIYYQKASDKPA-RDWDDVPEKIKETFERIGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG A ++S V KEE K G++F A+ E+P+L KKY +
Sbjct: 118 AERAYLAGAS-------AQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPELFKKYFAK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+
Sbjct: 171 LVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR
Sbjct: 231 SVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKR- 282
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G+ T KYPS L GE +CG SIA +N Q D+G KM+H A
Sbjct: 283 ATAKKDATVEWIDGNLGAKTTMKYPSVYLDGEGACGTMLSIAFANKGQHQDTGAKMIHNA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S IVSK I+ G YRG+V+ ++ + S + +CD++L+ + + TIP+ E
Sbjct: 343 PHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIH 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
NS LEHEA SKIS+E L+Y + RG+ E A +IV GFV +
Sbjct: 403 NSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPSTK 449
>gi|167756730|ref|ZP_02428857.1| hypothetical protein CLORAM_02271 [Clostridium ramosum DSM 1402]
gi|237734449|ref|ZP_04564930.1| FeS assembly protein sufB [Mollicutes bacterium D7]
gi|167702905|gb|EDS17484.1| hypothetical protein CLORAM_02271 [Clostridium ramosum DSM 1402]
gi|229382269|gb|EEO32360.1| FeS assembly protein sufB [Coprobacillus sp. D7]
Length = 468
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 191/475 (40%), Positives = 287/475 (60%), Gaps = 18/475 (3%)
Query: 9 DKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
D +I +Y YGF ++ V K PKG+NE+I+ IS KNEP+WMLE+RL +YR ++
Sbjct: 3 DIKNEIPDQEYAYGFNDGDVSVFKTPKGINEEIVTEISKIKNEPEWMLEYRLKSYRCFME 62
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
P+W + IDFD+ YY P + ++V + +T+ KLGIP EQ+ L+G
Sbjct: 63 KPMPTWG-VNLDRIDFDEYTYYVRPSDKQTNK-WEEVPETIKQTFNKLGIPEAEQKYLSG 120
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
V T ++S V +E+ + GVIF+ I + E+P++ +KY TV+P DN
Sbjct: 121 VST-------QYESEVVYHNMLKEVTEKGVIFLDIDSGLREYPEIFRKYFDTVIPYNDNK 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
++ALN AV++ GSF+Y+P GV+ L +YFRIN + QFERTLII D+G+ + Y+EGC
Sbjct: 174 FSALNGAVWSGGSFIYVPPGVKLDKPLQSYFRINSEQMAQFERTLIIVDKGADIHYVEGC 233
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
TAP + LHA VVE++ + A+ +Y+T+QNW I N VT+R
Sbjct: 234 TAPSYSRDSLHAGVVEIIVGEGAKCRYTTIQNW-------SNNILNLVTQRAKVF-KNGS 285
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ W GSA+T KYP+C+L E + G +IA++ Q +DSG+KM+HLA NT+S IV
Sbjct: 286 MEWVDGNIGSAVTMKYPTCVLMEEGAKGSCITIAVAGENQIMDSGSKMIHLAPNTSSSIV 345
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SK +S YRG V A +S++ +CD+L++ + + T+P +N+ +EH
Sbjct: 346 SKSVSRRGGKVNYRGMVQHGAKAYNSKSKVECDTLILDDISTSDTVPVNWMRNNDSIIEH 405
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
EAT SKIS+E LFY + RG+ ++ A+ +IV GF+ ++LPME+AVE +LI +
Sbjct: 406 EATVSKISEEQLFYLMSRGLTKKEAMEMIVMGFIEPFARELPMEYAVELNQLIKL 460
>gi|289422199|ref|ZP_06424055.1| FeS assembly protein SufB [Peptostreptococcus anaerobius 653-L]
gi|289157349|gb|EFD05958.1| FeS assembly protein SufB [Peptostreptococcus anaerobius 653-L]
Length = 470
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 176/485 (36%), Positives = 275/485 (56%), Gaps = 17/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
ET + + + D+ Y + + K KGL E+I+ IS +KNEPDWMLE RL + ++
Sbjct: 2 ETKKRTQIEEQDRGIYDIKNEFKFKSKTEKGLTEEIVTQISREKNEPDWMLEIRLASLKK 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ + +P+WA ++ D++ Y P + + + D V ++ T++ LGIP E+E
Sbjct: 62 FYELDNPTWAP-NLDEVNIDEITTYIRPDADL-VEDWDQVPEDIKNTFDMLGIPEAEREK 119
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
+ V A +DS V +++L GV++ A+ E+PD+V++Y +
Sbjct: 120 ------NLSGVGAQYDSEVVYHNMQQDLLDQGVVYTDFETAVREYPDIVRQYFMKCITNA 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ YAAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII +EG+Y ++
Sbjct: 174 DHKYAALHYAVWSGGSFVYVPKGVNVNVPLQSYFRLNAPGAGQFEHTLIIIEEGAYCHFI 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + +HA VEL + A ++YST++NW +YN TKR
Sbjct: 234 EGCSAPKYNVVNVHAGAVELFVKEGATLRYSTIENW-------SRNMYNLNTKRCIV-EK 285
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
KI W GS ++ YP +LRGE + EF I + Q +D+GTK++H A NT+S
Sbjct: 286 DGKIEWVSGSFGSKVSCLYPMSILRGENAKSEFTGITFAGKGQYLDTGTKVVHAAPNTSS 345
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ SK IS YRG V + + A S++ C+SL++ + TIP I+ +
Sbjct: 346 TVNSKSISKDGGVAIYRGLVKMTKNATGSKSTVSCESLMLDQESRSDTIPVIDIATQDVD 405
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
L HEA +I DE +FY + RGI E A +++V GF + ++LP+E+AVE LI++ L
Sbjct: 406 LGHEAKIGRIDDEVIFYLMSRGISEAEAKSMVVRGFAEPIAKELPLEYAVEMNNLINLEL 465
Query: 485 EGSVG 489
EG++G
Sbjct: 466 EGTIG 470
>gi|313905477|ref|ZP_07838841.1| FeS assembly protein SufB [Eubacterium cellulosolvens 6]
gi|313469661|gb|EFR64999.1| FeS assembly protein SufB [Eubacterium cellulosolvens 6]
Length = 470
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 173/488 (35%), Positives = 278/488 (56%), Gaps = 20/488 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + +V ID + Y F+ + + + +GL D I IS +KN+PDWM ++RL +
Sbjct: 1 MAKEKAQVEDID--RSMYDFKKSEDNEWRIEEGLTADTILEISKEKNDPDWMRDFRLKSL 58
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + P W +D D++ Y P + DDV ++ T+E+LGIP E+
Sbjct: 59 EIYNKSEVPDWGP-SIEGLDMDNIVTYVRPNAKRMANDWDDVPEDIKDTFERLGIPQAER 117
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVV 181
LAG V A +DS V ++ + + GVI+ + A+ E+ D++K + +V
Sbjct: 118 ASLAG-------VGAQYDSELVYHNLQDSVAEQGVIYTDLESAMRGEYADMIKSHFMKLV 170
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N KG GQFE TLII D+ +Y+
Sbjct: 171 PPTDHKFAALHGAVWSGGSFVYVPKGVHLDIPLQSYFRLNAKGAGQFEHTLIIVDDDAYL 230
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+AP+ + LHA VEL NA ++YST++NW +YN TKR C
Sbjct: 231 HFIEGCSAPKYNVANLHAGCVELFVGKNATLRYSTIENW-------SKNMYNLNTKRAKC 283
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
KI W GS +++ YP +L G S EF + + Q +D+G KM+H A +
Sbjct: 284 -EEGGKIEWISGSFGSHVSYLYPMSVLAGRGSRAEFTGVTFAGNGQNLDTGCKMVHNAPD 342
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S + ++ IS +T+R + V++ A +S++ C SL++ + + TIP ++ +
Sbjct: 343 TSSYVSTRSISKSGGISTFRSSIVVNKQAKNSKSSVSCQSLMLDDISRSDTIPAMDIRTQ 402
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEA +ISD+ +FY + RG+ EE A ALIV+GF V ++LP+E+AVE LI
Sbjct: 403 QADIGHEAKIGRISDDAVFYLMSRGLTEEDARALIVSGFADNVGKELPLEYAVEMNNLIR 462
Query: 482 ISLEGSVG 489
+ ++GS+G
Sbjct: 463 LEMKGSIG 470
>gi|319938245|ref|ZP_08012642.1| FeS assembly protein sufB [Coprobacillus sp. 29_1]
gi|319806538|gb|EFW03196.1| FeS assembly protein sufB [Coprobacillus sp. 29_1]
Length = 468
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 194/484 (40%), Positives = 293/484 (60%), Gaps = 21/484 (4%)
Query: 10 KVRKIDV--DQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+ +D+ + ++ F ++ V K PKGLN DI+R IS K EP+WMLE+RL + + +L
Sbjct: 2 AIEDLDIPTNNTEFDFRDEDVSVFKTPKGLNADIVREISKIKQEPEWMLEYRLKSLQCFL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+W + ++FDD YY+ P + + ++V + T+ KLGIP EQ LA
Sbjct: 62 DKPMPTWG-VDLSQMNFDDYTYYSRPSDNLTDK-WEEVPETIKNTFNKLGIPEAEQHFLA 119
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G A ++S V EE+K+ GVIF+ I + E+P++ KKY TV+P DN
Sbjct: 120 GAS-------AQYESEVVYHNMLEEVKEKGVIFLDIDSGLREYPEIFKKYFDTVIPYNDN 172
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++ALN AV++ GSF+Y+P GV+ L +YFRIN + QFERTLII D+GS + Y+EG
Sbjct: 173 KFSALNGAVWSGGSFIYVPPGVKLDKPLQSYFRINSERMAQFERTLIIVDKGSDIHYVEG 232
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP ++ LHA VVE+V L++A+ +Y+T+QNW IYN VT+R
Sbjct: 233 CTAPSYSKDSLHAGVVEIVVLEDAKCRYTTIQNW-------SKNIYNLVTQRAKV-EKNG 284
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ W GS +T KYP+C+L G+ S G +IA+++ Q IDSG+KM+HL KNT+S+I
Sbjct: 285 SMEWVDGNIGSLVTMKYPTCILAGDGSKGTCITIAVADDVQIIDSGSKMIHLGKNTSSQI 344
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+SK I+ YRG V + A +++ +CD+L++ + TIP N+ +E
Sbjct: 345 ISKSIARNGGKVNYRGLVRHSKKAMDAKSKVECDTLILDPISTSDTIPTNMMMNNDSIIE 404
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL-E 485
HEAT SK+S++ LFY + RG+ ++ A +IV GF+ ++LPME+AVE +LI + + E
Sbjct: 405 HEATVSKVSEDQLFYLMSRGLTKQQATEMIVMGFIEPFSRELPMEYAVELNQLIKLDMGE 464
Query: 486 GSVG 489
S+G
Sbjct: 465 DSIG 468
>gi|110667664|ref|YP_657475.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein I [Haloquadratum walsbyi DSM 16790]
gi|109625411|emb|CAJ51835.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein I [Haloquadratum walsbyi DSM 16790]
Length = 476
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 178/492 (36%), Positives = 274/492 (55%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D ++ D + ++ F+ K KGL E+ IR IS K+EP+WML+ RL A
Sbjct: 1 MSSEQDHLQDTDTEA-RFDFKKEESSAFKTEKGLTEETIRLISEDKDEPEWMLQRRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPKSI--VGPQSLDDVDPELLRTYEKLGIP 118
++ M P+ +D +++ Y P G ++ ++ T++KLGIP
Sbjct: 60 EQFNAMPMPTSWPEAPDLSEVDVEEIVPYIRPDVDVRAGVDDWTELPDDIKDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD-LVKKYL 177
E+ L+G V A ++S V +E+ ++ GVIF + EA+ EHP+ L + ++
Sbjct: 120 EAEKNALSG-------VGAQYESEVVYQNMQEQWEEKGVIFCDMDEAVREHPEKLKEHFM 172
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+ VP DN +AAL+ AV++ GSFVY+P+ V M + YFR+N +G GQFE TLIIA++
Sbjct: 173 TKAVPPSDNKFAALHGAVWSGGSFVYVPEDVTVEMPVQAYFRMNSEGMGQFEHTLIIAED 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ V Y+EGC+AP+ LHA VE+ ++A ++YSTVQNW YN TK
Sbjct: 233 GAEVHYIEGCSAPKYSAFNLHAGGVEVFVGEDAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R ++ W GS T YPS +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAIVESE-GRMEWISGSMGSKATMLYPSSVLKGRGASDNHITIAFAGDGQDIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A T S I SK IS YRG V + GA +S +CD+L+ N + T+PY+E
Sbjct: 345 NAPETKSTIESKSISKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
SS ++ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE
Sbjct: 405 INESSVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+L+++ +EGS+G
Sbjct: 465 RLVELEMEGSLG 476
>gi|313885388|ref|ZP_07819138.1| FeS assembly protein SufB [Eremococcus coleocola ACS-139-V-Col8]
gi|312619118|gb|EFR30557.1| FeS assembly protein SufB [Eremococcus coleocola ACS-139-V-Col8]
Length = 464
Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 186/475 (39%), Positives = 274/475 (57%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
++ Y+YGF ++ KGL+E+++R IS +K EP WML++RL + + + W
Sbjct: 7 INDYQYGFRDQAEILFSTGKGLSEEVVRAISKEKQEPQWMLDFRLQSLKEFYQQDMVDWG 66
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
A++FDD+ YY +S D V E+ T+E++GIP E+ LAG
Sbjct: 67 P-DLSALNFDDIIYYQKATPRPA-RSWDQVPQEIKDTFERIGIPQAERAYLAGAT----- 119
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
++S +V K+E K G+IF A+ ++P+L K+Y +TVV DNF +ALN A
Sbjct: 120 --VQYESEAVYHNLKQEFDKLGIIFTDTDSALRDYPELFKEYFATVVANNDNFISALNGA 177
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+C + L TYFRIN + TGQFERTLII DEG+ + Y+EGCTAP
Sbjct: 178 VWSGGSFIYVPKGVKCDIPLQTYFRINNEATGQFERTLIIVDEGASIHYVEGCTAPTYST 237
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
LH AVVE++ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 238 ASLHGAVVEIIVKKDAYCRYTTIQNW-------SHNVYNLVTKRTHAY-ENATMEWVDGN 289
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
G+ T KYPS +L+ + G SIA + Q D+G K+ H+A +T+S I+SK I
Sbjct: 290 IGAHTTMKYPSVVLKEAGARGTVMSIAFAGKDQIQDAGAKIYHMAPHTSSSIISKSICKD 349
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG+ + S+ +CD++++ + TIP+ E N LEHEA S+I
Sbjct: 350 GGEVDYRGQTYFGPNSQGSKAHIECDTIIMDELSKSDTIPFNEIHNGQVALEHEAKVSRI 409
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY + RG+ E A +I+ GFV+ ++LPME+AVE +LI +EGSVG
Sbjct: 410 SEEQLFYLMSRGLTEAQATEMIIMGFVQPFSKELPMEYAVELNRLISYEMEGSVG 464
>gi|227501077|ref|ZP_03931126.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus tetradius ATCC 35098]
gi|227216850|gb|EEI82248.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Anaerococcus tetradius ATCC 35098]
Length = 470
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 176/481 (36%), Positives = 271/481 (56%), Gaps = 18/481 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D+++++D Y + F D KG+N DI+ IS KKNEPDWM RL + + +
Sbjct: 8 DQLKELDRGYYDF-FNEFEYADITEKGINADIVNEISTKKNEPDWMRRRRLKSLELFEKI 66
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+PSW ++ D+ Y PKS + + ++ T+++LGIP EQE LAG
Sbjct: 67 DNPSWGP-DLSELNMADITTYVKPKSDKKSN-WEALPDDIRDTFDRLGIPQAEQESLAG- 123
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A +DS V + ++ L GVIFM S A+ EH D+VK Y +P + Y
Sbjct: 124 ------VGAQYDSEEVYHSIQKHLSDQGVIFMDFSSAVREHEDIVKAYFQKAIPPTLHKY 177
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AAL+ AV++ GS +Y+P+GV + L +Y+R+N G GQFE T+IIA++ + V ++EGC+
Sbjct: 178 AALHGAVWSGGSLIYVPEGVEVDIPLQSYYRLNAPGAGQFEHTMIIAEDNAKVHFIEGCS 237
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP+ + LHA VE+ NAE+++ST++NW +YN TKR + K+
Sbjct: 238 APRYNVVNLHAGSVEIFVGKNAEVRFSTIENW-------SRNMYNLNTKRAIVQ-EGGKV 289
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS ++ YP+ +L GE + E+ I ++ Q ID+G M+HLA NT S ++
Sbjct: 290 IWVSGSFGSKVSMLYPTSVLVGEGASAEYTGITFASNGQYIDNGCSMIHLAPNTYSTALT 349
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K I+AG + R V + + A +R+ C++L+I + TIP ++ +N + HE
Sbjct: 350 KSITAGNGKSMTRSLVQIKKKAKGARSTVDCENLMISEESQSDTIPVLDIRNDDVDCGHE 409
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A I +FY + RGIPEE A ++IV GF + ++LP+E+AVE LID+ LEG+
Sbjct: 410 AKIGSIDQSQIFYLMTRGIPEEEAKSMIVRGFAEPISRELPLEYAVEMNHLIDMELEGAN 469
Query: 489 G 489
G
Sbjct: 470 G 470
>gi|238926309|ref|ZP_04658069.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas flueggei ATCC 43531]
gi|238885989|gb|EEQ49627.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas flueggei ATCC 43531]
Length = 472
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 166/486 (34%), Positives = 278/486 (57%), Gaps = 18/486 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
V + ++ I+ Y + K+ GL E+IIR ISA+K++P WML++RL + +
Sbjct: 5 VPKKKTQIDDIERTIYDI-TNEDRSAYKSASGLTEEIIRDISARKHDPAWMLDFRLKSLK 63
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W A+D D++ Y P + + ++V ++ T+++LGIP E+
Sbjct: 64 VYHETPMPAWGP-DLSALDMDEIVTYVRPDAKMVGD-WNEVPEDIKDTFDRLGIPAAEKS 121
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG V A +DS V + +E L K GV++ + A+ E+ D+V++Y T+VP
Sbjct: 122 SLAG-------VGAQYDSEVVYHSIQESLVKQGVVYTDMETALQEYGDIVQQYFMTLVPP 174
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
+ +AAL+ AV++ GSFVY+P+G++ + L +YFR+N G GQFE TLII ++G+ + +
Sbjct: 175 KAHKFAALHGAVWSGGSFVYVPEGIQVDIPLQSYFRLNAAGAGQFEHTLIIVEKGASLHF 234
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ + LHA VEL + A ++YST++NW + N TKR
Sbjct: 235 IEGCSAPKYNVTNLHAGCVELFVKEGARLRYSTIENW-------SRNMMNLNTKRVKV-E 286
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ W GS ++ YP+ +L+GE + EF I ++ Q++D+G ++ A NT+
Sbjct: 287 KNGAVEWVSGSFGSHVSMLYPTSILQGENATCEFTGITFASKGQELDTGATVILDAPNTS 346
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+ I ++ IS YR V V A ++ C+SL++ + + T+P ++ +
Sbjct: 347 ANISTRSISKSGGAAIYRSGVKVTPRAVGAKCSVNCESLMLDSASRSDTLPVMDVACDTV 406
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEA +ISDE +FY + RGI EE A A+IV GFV + ++LP+E+AVE L++I
Sbjct: 407 DIGHEAKIGRISDEAIFYLMSRGIDEEEARAMIVRGFVEPIAKELPLEYAVEMNNLVNIE 466
Query: 484 LEGSVG 489
LEG++G
Sbjct: 467 LEGAMG 472
>gi|299144226|ref|ZP_07037306.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518711|gb|EFI42450.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 472
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 179/490 (36%), Positives = 271/490 (55%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ++ ++D Y + + K KGL E+I+R IS +K+EP+WMLE+RL
Sbjct: 1 MPREVRKKTQIEEMDRGIY--DIKNEVVYRSKTEKGLTEEIVRQISKEKDEPEWMLEYRL 58
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + ++P W +D + + Y P + + + V E+ T++KLGIP
Sbjct: 59 KALEIFNEKENPVWGP-DISEVDIEKITTYIRPDADLT-DDWNLVPDEIRDTFDKLGIPE 116
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+E L V A +DS V ++ L GV++ + E+P++VKKY
Sbjct: 117 AEKEAL------LSGVGAQYDSEVVYHNIQKYLLDQGVVYTDFESGLREYPEIVKKYFGK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+ + YAAL+ AV++ GSFVY+PKGVR + L +YFR+N G GQFE TLII ++ +
Sbjct: 171 CISPNLHKYAALHYAVWSGGSFVYVPKGVRVDVPLQSYFRLNAPGAGQFEHTLIIVEDDA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
Y ++EGC+AP+ + LHA VEL +N+ ++YST++NW +YN TKR
Sbjct: 231 YCHFIEGCSAPKYNVVNLHAGAVELFIGENSTLRYSTIENW-------SRNMYNLNTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
KI W GS ++ YP+ +L G+ + EF I+ + Q ID+G +++H A
Sbjct: 284 IV-EKNGKIEWVSGSFGSKVSMLYPASVLVGDYATSEFTGISFAGVGQNIDTGAQVIHAA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
TTS + SK IS YRG V V GA ++ C+SL++ + + TIP I+ K
Sbjct: 343 SYTTSTVNSKSISKSGGIAVYRGLVKVAEGAHDCKSSVSCESLMLDSLSRSDTIPVIDIK 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N S +L HEA +ISD+ +FY + RGI E A A++V GF + ++LPME+AVE L
Sbjct: 403 NKSVDLGHEAKIGRISDQVIFYLMSRGISENDAKAMVVRGFAEPIAKELPMEYAVEMNNL 462
Query: 480 IDISLEGSVG 489
I + LEGS+G
Sbjct: 463 ISLELEGSIG 472
>gi|333027958|ref|ZP_08456022.1| hypothetical protein STTU_5462 [Streptomyces sp. Tu6071]
gi|332747810|gb|EGJ78251.1| hypothetical protein STTU_5462 [Streptomyces sp. Tu6071]
Length = 420
Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats.
Identities = 180/436 (41%), Positives = 265/436 (60%), Gaps = 16/436 (3%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M + RL + + P+W IDF+++ Y+ +S +D+ ++ TY+
Sbjct: 1 MTKLRLKGLKLFEKKPMPNWGS-DLSGIDFENIKYFVRSTEKQA-ESWEDLPEDIKNTYD 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
KLGIP E++ L V A ++S V +E+L++ GVIF+ A+ EHPDL
Sbjct: 59 KLGIPEAEKQRLV------AGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPDLF 112
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K+Y TV+PVGDN +A+LNSAV++ GSF+Y+PKGV + L YFRIN + GQFERTLI
Sbjct: 113 KEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I DE +YV Y+EGCTAP + LH+AVVE++ A +Y+T+QNW +YN
Sbjct: 173 IVDEDAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKGARCRYTTIQNW-------SNNVYN 225
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
VTKR + + W GS +T KYP+ L GE + GE SIA + Q D+G
Sbjct: 226 LVTKRAVAY-EGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGA 284
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+A NT+S IVSK ++ G +YRG + V GA+ S++ CD+LL+ + T
Sbjct: 285 KMVHMAPNTSSNIVSKSVARGGGRTSYRGLIEVGEGASGSKSNVLCDALLVDTISRSDTY 344
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PY++ + ++ HEAT SK+SD+ LFY + RG+ E A+A+IV GFV + ++LPME+A
Sbjct: 345 PYVDVREDDVSMGHEATVSKVSDDQLFYLMSRGLTEFEAMAMIVRGFVEPIAKELPMEYA 404
Query: 474 VEAQKLIDISLEGSVG 489
+E +LI++ +EG+VG
Sbjct: 405 LELNRLIELQMEGAVG 420
>gi|312144389|ref|YP_003995835.1| FeS assembly protein SufB [Halanaerobium sp. 'sapolanicus']
gi|311905040|gb|ADQ15481.1| FeS assembly protein SufB [Halanaerobium sp. 'sapolanicus']
Length = 467
Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats.
Identities = 170/484 (35%), Positives = 275/484 (56%), Gaps = 18/484 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+V+ ID Y N K+ KGL +II+ IS +K+EP WM ++RL + +
Sbjct: 2 SEKTQVKDIDRSLYDKK-NENKYRYKSEKGLTPEIIKDISREKDEPQWMTDFRLKSLEIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L + P W ++ +++ Y P + + D+V E+ T++ LGIP E++ L
Sbjct: 61 LEKEIPDWG-ADLSDLNLEEIIAYIRPDADLQSD-WDEVPEEIKNTFDSLGIPEAEKKSL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG V A +DS V K+EL + GVI+M + AI E+ D+VK++ ++ D
Sbjct: 119 AG-------VGAQYDSEVVYHNLKKELVEQGVIYMDMENAIKEYEDVVKEHFMKLITPND 171
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ ++AL+ AV++ GSFVY+P GV+ + L +YFR N G GQFE TLII ++G+ ++E
Sbjct: 172 HKFSALHGAVWSGGSFVYVPAGVKVDVPLQSYFRFNAPGAGQFEHTLIILEKGAEAHFIE 231
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+APQ N LHA VEL +NA ++YST++NW +YN TKR
Sbjct: 232 GCSAPQYSINNLHAGAVELFIAENASLRYSTIENW-------SRNMYNLNTKRASV-EKN 283
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
I W GS ++ YP +L+G+ + EF + + Q +D+G +++H A +TTS
Sbjct: 284 GVIEWVSGSFGSKVSMLYPMSILKGKGARAEFTGVTFAAEGQHLDTGAQVIHAAPHTTST 343
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ ++ I+ G YRG + + A H++ C+SL++ N+ + T+P ++ + ++
Sbjct: 344 VNTRSIAKGGGKAYYRGLLKATKNAHHAKASVSCESLMLDNDSVSDTLPIMKLETDDIDI 403
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEA +IS+E ++Y + RGI EE A A+IV GFV + ++LP+E+AVE LI + LE
Sbjct: 404 GHEAKVGRISEESIYYLMSRGIDEEEAKAMIVRGFVEPIAKELPLEYAVELNNLISLELE 463
Query: 486 GSVG 489
G++G
Sbjct: 464 GTIG 467
>gi|309390039|gb|ADO77919.1| Iron-regulated ABC transporter membrane component SufB
[Halanaerobium praevalens DSM 2228]
Length = 467
Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats.
Identities = 173/489 (35%), Positives = 272/489 (55%), Gaps = 22/489 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M E D R + + K +A KGL +I+ IS +K+EP+WML++RL
Sbjct: 1 MSERTEVKDIDRSLHDQKNK-----EKHRYQAAKGLTPAVIKEISKEKDEPEWMLDFRLK 55
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+ + + P+W +D D++ Y P + + + D V E+ T++ LGIP
Sbjct: 56 SLAIYKEKEVPTWG-ADISDLDMDNIITYVRPDADLQ-DNWDQVPKEIKDTFDALGIPEA 113
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E+E LAG V A +DS V KEE+ + GVI+M + A+ +H DLVK++ +
Sbjct: 114 EKESLAG-------VGAQYDSEVVYHNLKEEMVEQGVIYMDMESAVKKHEDLVKEHFMKL 166
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+ D+ ++AL+ AV++ GSFVYIP GV + L +YFR N G+GQFE TLII +EG+
Sbjct: 167 ITPNDHKFSALHGAVWSGGSFVYIPAGVDVDIPLQSYFRQNAPGSGQFEHTLIILEEGAN 226
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
++EGC+AP+ N LHA VEL A+++YST++NW +YN TKR
Sbjct: 227 AHFIEGCSAPKYSVNNLHAGAVELFVNKKAKLRYSTIENW-------SRNMYNLNTKRAL 279
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
I W GS ++ YP +L+G ++ EF + + Q +D+G +++H A
Sbjct: 280 V-EEDGVIEWVSGSFGSKVSMLYPMSILKGARARAEFTGVTFAAEGQYLDTGAQVIHAAP 338
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NTTS + S+ I+ + YRG + A ++ C+SL++ N + T+P ++ +
Sbjct: 339 NTTSTVNSRSIAKDGGHAYYRGLLKATENAQGAKASVSCESLMLDNQSKSDTLPIMKLET 398
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ HEA +IS+E +FY + RGI EE A A+IV GFV + +LP+E+AVE LI
Sbjct: 399 DDIDIGHEAKVGRISEEAIFYLMSRGISEEEAKAMIVRGFVEPIASELPLEYAVELNNLI 458
Query: 481 DISLEGSVG 489
++ LEG++G
Sbjct: 459 NLELEGTIG 467
>gi|292655023|ref|YP_003534920.1| FeS assembly protein SufB [Haloferax volcanii DS2]
gi|291372896|gb|ADE05123.1| FeS assembly protein SufB [Haloferax volcanii DS2]
Length = 476
Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats.
Identities = 178/492 (36%), Positives = 277/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D + ++ F+ A KGL E+ IR IS K+EP+WMLE RL A
Sbjct: 1 MSSDQDHLKETDTEA-RFEFKKEQKAAFVAEKGLTEETIRVISEDKDEPEWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPKSIV--GPQSLDDVDPELLRTYEKLGIP 118
+++ M P+ + ++ D++ Y P V G D+ ++ T++KLGIP
Sbjct: 60 KQYQKMPMPTDWPGQPDLSEVNVDEIVPYIRPDVEVRGGVDDWRDLPDDIKDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E ++ GV+FM + +A+ EH D+VK+Y
Sbjct: 120 EAEKNALSG-------VGAQYESEVVYQNMQERWEEKGVVFMNMDQAVQEHEDIVKEYFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ A+++ GSFVY+P+ V M + YFR+N +G GQFE TLI+A++
Sbjct: 173 TKCVPPSDNKFAALHGAIWSGGSFVYVPEDVTVEMPVQAYFRMNSEGMGQFEHTLIVAEK 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V Y+EGC+AP+ LH+ VE+ ++A ++YSTVQNW YN TK
Sbjct: 233 GSEVHYIEGCSAPKYSAFNLHSGGVEVFVGEDAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R ++ W GS T YP+ +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAIV-EKGGRMEWISGSMGSKATMLYPASILKGRGASDNHITIAFAGEGQNIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A T S I SK IS YRG V + GA +S +CD+L+ N + T+PY+E
Sbjct: 345 NAPETKSTIESKSISKDGGRTNYRGLVHIANGAKNSSTAVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
S+ ++ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE
Sbjct: 405 INESTVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+L+++ +EGS+G
Sbjct: 465 RLVELEMEGSLG 476
>gi|15896534|ref|NP_349883.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|15026367|gb|AAK81223.1|AE007825_7 Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|325510692|gb|ADZ22328.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum EA 2018]
Length = 466
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 174/483 (36%), Positives = 270/483 (55%), Gaps = 18/483 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ D + ++ Y + K KGL +II IS +K++P WML++RL
Sbjct: 1 MEAKKDLFKNLERGVYDIK-NEDRYSYKVNKGLTPEIIEKISKEKHDPKWMLDFRLKCLD 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ + PSW +D D++ Y P + + ++V ++ T+EKLGIP E+E
Sbjct: 60 VYNKTELPSWGP-SLDELDMDNIVTYVRPDTEMKGS-WNEVPDDIKDTFEKLGIPKAERE 117
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG V A +DS V + KE+L K GVI+ + AI ++ D+VK+Y +VP
Sbjct: 118 SLAG-------VGAQYDSEVVYHSIKEDLVKQGVIYTDMETAINKYEDIVKEYFMKLVPP 170
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ + AL+ AV++ GSFVY+P+GV + L +YFR+N G GQFE TLII ++G+ + +
Sbjct: 171 SDHKFVALHGAVWSGGSFVYVPEGVNVDIPLQSYFRLNSPGAGQFEHTLIIVEKGATLHF 230
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ + LHA VEL ++A ++YST++NW + N TKR
Sbjct: 231 IEGCSAPKYNVTNLHAGCVELYVKEDATLRYSTIENW-------SKNMLNLNTKRAVV-E 282
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
I W GS I+ YP +L+GE + E+ + + Q +D+GTK++H A T+
Sbjct: 283 KNGTIEWVSGSFGSKISMLYPMSILKGEGAKSEYTGVTFAGEGQHLDTGTKVVHAAPYTS 342
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I +K IS G YRG V V A H ++ CDSL++ + + TIP ++ N
Sbjct: 343 STISAKSISKGGGTCIYRGSVKVTENAHHCKSSVSCDSLMLDDISQSDTIPALDLANDEV 402
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEA +ISD+ +FY + RG+ E+ A A+IV GFV + + LP+E+AVE LI +
Sbjct: 403 DIGHEAKIGRISDDAIFYLMSRGVSEDEARAMIVRGFVNPISKALPLEYAVEMNNLIKLE 462
Query: 484 LEG 486
L+G
Sbjct: 463 LKG 465
>gi|322371764|ref|ZP_08046307.1| FeS assembly protein SufB [Haladaptatus paucihalophilus DX253]
gi|320548649|gb|EFW90320.1| FeS assembly protein SufB [Haladaptatus paucihalophilus DX253]
Length = 476
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 184/492 (37%), Positives = 278/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D ++ ++ F+ + K+ KGL E+++R IS K+EP+WML+ RL A
Sbjct: 1 MSSDQDHLKETDTEE-RFEFKKEQRAAVKSDKGLTEEVVRLISEDKDEPEWMLQRRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPKSIV--GPQSLDDVDPELLRTYEKLGIP 118
+ M P+ + +D +++ Y P G DD+ ++ T++KLGIP
Sbjct: 60 EHYQNMPMPTDWPGQPDLSGLDVEEIVPYIRPDVDKRGGADDWDDLPDDIKDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E+ ++ GVIF + EA+ EH DLV++Y
Sbjct: 120 EAERNALSG-------VGAQYESEVVYQNMQEQWEEKGVIFCNMDEAVQEHEDLVREYFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ AV++ GSFVY+P+GV M + YFR+N +G GQFE TLIIA+E
Sbjct: 173 TKCVPPSDNKFAALHGAVWSGGSFVYVPEGVTVQMPVQAYFRMNSEGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V Y+EGC+AP+ LH+ VE+ ++A ++YSTVQNW YN TK
Sbjct: 233 GSEVHYIEGCSAPKYSAFNLHSGGVEVFVGEDAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R ++ W GS T YP +L+G + SIA + Q ID+G K+ H
Sbjct: 286 RAIVEA-GGRMEWVSGSMGSKSTMLYPCSILKGRGASANQISIAFAGEGQDIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A NT S I SK IS YRG V + GA S +CD+L+ N + T+PY+E
Sbjct: 345 NAPNTNSTIESKSISKDGGRTNYRGLVHISEGAVDSSTSVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ N+ HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE
Sbjct: 405 INENRVNVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGS+G
Sbjct: 465 RLIELEMEGSLG 476
>gi|304436801|ref|ZP_07396769.1| iron ABC superfamily ATP binding cassette transporter, membrane
protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370281|gb|EFM23938.1| iron ABC superfamily ATP binding cassette transporter, membrane
protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 472
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 165/486 (33%), Positives = 278/486 (57%), Gaps = 18/486 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
V + ++ I+ Y + K+ GL E+IIR ISA+K++P WML++RL + +
Sbjct: 5 VPKKKTQIDDIERTIYDI-TNEDRSAYKSASGLTEEIIRDISARKHDPAWMLDFRLKSLK 63
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W A++ D++ Y P + + ++V ++ T+++LGIP E+
Sbjct: 64 VYHETPMPAWGP-DLSALNMDEIVTYVRPDAKMVGD-WNEVPEDIKDTFDRLGIPAAEKS 121
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG V A +DS V + +E L K GV++ + A+ E+ D+V++Y T+VP
Sbjct: 122 SLAG-------VGAQYDSEVVYHSIQESLVKQGVVYTDMETALQEYGDIVQQYFMTLVPP 174
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
+ +AAL+ AV++ GSFVY+P+G++ + L +YFR+N G GQFE TLII ++G+ + +
Sbjct: 175 KAHKFAALHGAVWSGGSFVYVPEGIQVDIPLQSYFRLNAAGAGQFEHTLIIVEKGASLHF 234
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ + LHA VEL + A ++YST++NW + N TKR
Sbjct: 235 IEGCSAPKYNVTNLHAGCVELFVKEGARLRYSTIENW-------SRNMMNLNTKRVKV-E 286
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ W GS ++ YP+ +L+GE + EF I ++ Q++D+G ++ A NT+
Sbjct: 287 KNGAVEWVSGSFGSHVSMLYPTSILQGENATCEFTGITFASKGQELDTGATVILDAPNTS 346
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+ I ++ IS YR V V A ++ C+SL++ + + T+P ++ +
Sbjct: 347 ANISTRSISKSGGAAIYRSGVKVTPRAVGAKCSVNCESLMLDSASRSDTLPVMDVACDTV 406
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEA +ISDE +FY + RGI EE A A+IV GFV + ++LP+E+AVE L++I
Sbjct: 407 DIGHEAKIGRISDEAIFYLMSRGIDEEEARAMIVRGFVEPIAKELPLEYAVEMNNLVNIE 466
Query: 484 LEGSVG 489
LEG++G
Sbjct: 467 LEGAMG 472
>gi|292671040|ref|ZP_06604466.1| FeS assembly protein SufB [Selenomonas noxia ATCC 43541]
gi|292647357|gb|EFF65329.1| FeS assembly protein SufB [Selenomonas noxia ATCC 43541]
Length = 472
Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 169/483 (34%), Positives = 278/483 (57%), Gaps = 18/483 (3%)
Query: 8 VDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
K + D+++ Y + K+ GL E+IIR ISA+KN+P+WMLE+RL + +
Sbjct: 7 KKKTQVADIERTIYDITNEDRSIYKSASGLTEEIIRDISARKNDPEWMLEFRLKSLDTYH 66
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
TM+ PSW +D D + Y P + + ++V ++ T+++LGIP E+ LA
Sbjct: 67 TMELPSWGP-DLSYLDMDHIVTYVQPDAKMTGS-WNEVPEDIKETFDRLGIPEAEKTTLA 124
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G V A +DS V + ++ L + GV++ + A+ E+ D+V++Y T++P +
Sbjct: 125 G-------VGAQYDSEVVYHSIQKSLVEQGVVYTDMETALQEYGDIVREYFMTLLPPTAH 177
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+ AL+ AV++ GSFVY+P+GV+ + L +YFR+N G GQFE TLII ++G+Y+ ++EG
Sbjct: 178 KFMALHGAVWSGGSFVYVPEGVKVDIPLQSYFRLNAAGAGQFEHTLIIVEKGAYLHFIEG 237
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
C+AP+ + LHA VEL +NA ++YST++NW + N TKR
Sbjct: 238 CSAPKYNVTNLHAGCVELFVRENARLRYSTIENW-------SRNMMNLNTKRVIV-EKNG 289
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
I W GS ++ YP+ +L GE + EF I ++ Q++D+G ++ A NT++ I
Sbjct: 290 AIEWVSGSFGSHVSMLYPTSILHGENATCEFTGITFASKGQELDTGATVIFDAPNTSANI 349
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
++ IS YR V V A ++ C+SL++ + + T+P ++ ++
Sbjct: 350 STRSISKAGGVAVYRSAVKVTPRAVGAKCSVDCESLMLDSESRSDTLPVMDIMCDQVDIG 409
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA +ISDE +FY + RGI E+ A A+IV GFV + ++LP+E+AVE L++I LEG
Sbjct: 410 HEAKIGRISDEAIFYLMSRGIDEDEARAMIVRGFVEPIAKELPLEYAVEMNNLVNIELEG 469
Query: 487 SVG 489
++G
Sbjct: 470 TMG 472
>gi|300709371|ref|YP_003735185.1| sufB domain-containing protein [Halalkalicoccus jeotgali B3]
gi|300711792|ref|YP_003737606.1| FeS assembly protein SufB [Halalkalicoccus jeotgali B3]
gi|299125475|gb|ADJ15814.1| FeS assembly protein SufB [Halalkalicoccus jeotgali B3]
gi|299126089|gb|ADJ16428.1| sufB domain-containing protein [Halalkalicoccus jeotgali B3]
Length = 472
Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 182/484 (37%), Positives = 277/484 (57%), Gaps = 21/484 (4%)
Query: 12 RKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
++ +Q ++ + ++ KGL E+++R IS K+EPDWML+ RL A + M
Sbjct: 4 EELTKNQERFDHRNEERSAFRSEKGLTEEVVRLISEDKDEPDWMLDRRLRALEHYQNMPL 63
Query: 71 PS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+ + +D +++ Y P + S +DV ++ T+EKLGIP E+E L+
Sbjct: 64 PTDWPGQPDLTQLDVEEIIPYIRPDVEARGSVDSWEDVPEDIKDTFEKLGIPEAERESLS 123
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST-VVPVGD 185
G V A ++S V +E+ ++ GV+FM + EA+ EHPD+VK+Y T VP D
Sbjct: 124 G-------VGAQYESEVVYQNMQEQWEEKGVVFMNMDEAVQEHPDIVKEYFMTRCVPPSD 176
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N +AAL+ AV++ GSFVY+P+ V M + YFR+N +G GQFE TLI+A++GS V Y+E
Sbjct: 177 NKFAALHGAVWSGGSFVYVPEDVTVEMPVQAYFRMNSEGMGQFEHTLIVAEKGSEVHYIE 236
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP+ + LH+ VE+ ++A ++YSTVQNW +N TKR
Sbjct: 237 GCSAPKYGTHNLHSGGVEVFVGEDAHVQYSTVQNW-------SKNTFNLNTKRALA-EKG 288
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
++ W GS T YP +L+G + SIA + Q ID+G K+ H A NT S
Sbjct: 289 GRMEWVSGSMGSKATMLYPCTILKGRGASANHISIAFAGEGQDIDTGAKVYHNAPNTNST 348
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I SK IS YRG V + GA S +CD+L+ N + T+PY+E S ++
Sbjct: 349 IESKSISKDGGRTNYRGLVHIADGAHDSSTSVECDALMFDNESVSDTMPYMEINESKVDV 408
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEAT KI DE +FY RG+ ++ A +IV+GF+ + ++LP+E+AVE +LI++ +E
Sbjct: 409 AHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVELNRLIELEME 468
Query: 486 GSVG 489
GS+G
Sbjct: 469 GSLG 472
>gi|229815532|ref|ZP_04445859.1| hypothetical protein COLINT_02579 [Collinsella intestinalis DSM
13280]
gi|229808762|gb|EEP44537.1| hypothetical protein COLINT_02579 [Collinsella intestinalis DSM
13280]
Length = 470
Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 165/485 (34%), Positives = 265/485 (54%), Gaps = 20/485 (4%)
Query: 8 VDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
++ D+D+ Y F + ++ GL DI+R IS +KNEP WMLE RL + +
Sbjct: 3 KNRTEVADIDRSLYDFRYGEEGFERLDAGLTPDIVREISERKNEPAWMLERRLKSLEIYH 62
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
+P+W +D D + Y P + + V ++ T+E+LGIP E+ LA
Sbjct: 63 NTPNPTWGP-GIEGLDMDHIVTYVKPNTDQK-NDWESVPDDIKDTFERLGIPEAERSYLA 120
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC--EHPDLVKKYLSTVVPVG 184
G V A +DS V ++ K G+++ I EA+ E ++++ T++P
Sbjct: 121 G-------VGAQYDSELVYHNMQDTAAKMGIVYSGIEEALQIPEWEAIIREKFMTLIPPT 173
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKG++ L +YFR+N KG GQFE TLI+ ++ + + ++
Sbjct: 174 DHKFAALHGAVWSGGSFVYVPKGIKLDFPLQSYFRLNAKGAGQFEHTLIVVEDDADLHFI 233
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL A ++YST++NW +YN TKR C
Sbjct: 234 EGCSAPKYNVANLHAGAVELFVGKRAHLRYSTIENW-------SKNMYNLNTKRARC-EE 285
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+I W GS + + YP +L G +S F I + Q +D+G K++ A +TT+
Sbjct: 286 EGEIEWISGSFGSHVGYLYPMSVLAGRKSRSSFTGITFAGTGQNLDTGCKVVLGAPDTTA 345
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ +K IS G +T+R + A S C SL++ + + TIP ++ + + +
Sbjct: 346 TVETKSISKGGGISTFRSSIVATPAAEGSAASVSCQSLMLDDISRSDTIPAMDIRAKNVD 405
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT +I D+ +FY + RGI EE A +IVNGF V ++LP+E+AVE LI + +
Sbjct: 406 IGHEATIGRIGDDKIFYLMSRGISEEEARTMIVNGFANPVSKELPLEYAVEMNNLIKLEM 465
Query: 485 EGSVG 489
EG++G
Sbjct: 466 EGAIG 470
>gi|148270543|ref|YP_001245003.1| FeS assembly protein SufB [Thermotoga petrophila RKU-1]
gi|147736087|gb|ABQ47427.1| Iron-regulated ABC transporter membrane component SufB [Thermotoga
petrophila RKU-1]
Length = 464
Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 173/480 (36%), Positives = 282/480 (58%), Gaps = 18/480 (3%)
Query: 11 VRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ ++ +D ++ F ++ KAP GL+E +I+ IS K+EP+WML+ RL + + +
Sbjct: 2 MERLIIDDSRFNFVPKVKTAYKAPPGLDEKLIKEISRAKDEPEWMLKHRLESLKVFNEWH 61
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P + + +D + Y P + ++V E+ ++KLGIP E++ LAG
Sbjct: 62 NPRFG-VDISGLDLGKIVSYIKPDAKKSTS-WEEVPEEVKEAFDKLGIPEAERKYLAG-- 117
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
V A DS V K+EL+K GVIF+ + A+ E+PDLVKKY +VP+ D+ +A
Sbjct: 118 -----VGAQLDSEIVYQNMKKELEKMGVIFLDMESAVREYPDLVKKYFMKLVPITDHKFA 172
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
AL+ A+++ G+F+Y+P GV+ PM L YF ++ G GQFE T+I+A+EGS V+++EGC+A
Sbjct: 173 ALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMSNPGMGQFEHTIIVAEEGSEVTFIEGCSA 232
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P+ + LHA +VE+ A++KY T+QNW YN TKR S ++
Sbjct: 233 PRYNIINLHAGMVEIYVKKGAKVKYLTIQNW-------SKNTYNLNTKRSIVDEEGS-MT 284
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS T YP +L+G+ + E SI + Q +D+G+K++HLA T+S + +K
Sbjct: 285 WVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHMDTGSKVVHLAPYTSSIVSAK 344
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
IS G YRG + + + A S+ +C +L++ N + T+P IE + ++ HEA
Sbjct: 345 SISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSKSDTVPIIEVETDRADVGHEA 404
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I ++ +FY + RG+ E+ A A+IV GFV V+++LP E+AVE KL+++ +E S+G
Sbjct: 405 RIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELPFEYAVELNKLLELEIEKSIG 464
>gi|302766223|ref|XP_002966532.1| ATP-binding cassette transporter, subfamily I, member 13, SmABCI13
[Selaginella moellendorffii]
gi|300165952|gb|EFJ32559.1| ATP-binding cassette transporter, subfamily I, member 13, SmABCI13
[Selaginella moellendorffii]
Length = 464
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 250/471 (53%), Positives = 327/471 (69%), Gaps = 9/471 (1%)
Query: 20 KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYP 79
K+GF + ++ PKGL+E+ IR IS+K+ EP WML++R+ A+ +W M PSW+ +R+P
Sbjct: 2 KWGFSSKVESVSIPKGLSEETIRLISSKRQEPPWMLDFRMDAFHKWQKMAPPSWSELRHP 61
Query: 80 AIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ-EILAGVQTSKVAVDAV 138
+DF D+ YY+ PK ++ Y++LG+ + E G + +AVDAV
Sbjct: 62 PVDFQDMSYYSEPK--------PSEHAAIVDAYQRLGVDLGPPPESTPGSKPRSMAVDAV 113
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
FDS SV T EL+ GV F +S+A+ E P++V+ L VVP DNFYAALNSAVF+D
Sbjct: 114 FDSTSVALTHHRELEDGGVFFRSLSQAVREFPEVVRDNLGRVVPASDNFYAALNSAVFSD 173
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSF Y+ G + LST FRIN TGQFERTLI+ +EG +++YLEGCTA D NQLH
Sbjct: 174 GSFCYVKAGGGVSIPLSTQFRINAPETGQFERTLIVVEEGGHLTYLEGCTATAHDTNQLH 233
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVEL NA+I Y TVQNWY GD QG+GGIYNFVTKRG C G +S+ISW+Q+ETGSA
Sbjct: 234 AAVVELYCARNAKIDYYTVQNWYSGDQQGRGGIYNFVTKRGLCDGEKSEISWSQVETGSA 293
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
ITWKYPS +LRG+ S G+F+S+A++ QQ D+G+KM+HL KNT S IVSKG+SAG S N
Sbjct: 294 ITWKYPSVVLRGDGSVGKFHSVALTQNQQQADTGSKMIHLGKNTKSFIVSKGVSAGNSTN 353
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
YRG V + AA +RNF+QCDSLLIGN A T P I+ +N S +EHEA+TSK+SDE
Sbjct: 354 CYRGLVQIQPSAAGARNFSQCDSLLIGNKSTASTFPVIQGRNPSSRIEHEASTSKVSDEQ 413
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY QRGI E+ A A+IV+GF R+V+ + EF E +L+ + L+G VG
Sbjct: 414 LFYFRQRGISEDVAAAMIVSGFCRDVVDQFVGEFERELPELLKMKLKGCVG 464
>gi|330837702|ref|YP_004412343.1| Iron-regulated ABC transporter membrane component SufB [Spirochaeta
coccoides DSM 17374]
gi|329749605|gb|AEC02961.1| Iron-regulated ABC transporter membrane component SufB [Spirochaeta
coccoides DSM 17374]
Length = 472
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 172/490 (35%), Positives = 280/490 (57%), Gaps = 19/490 (3%)
Query: 1 MV-AVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + ++ ++D+ ++ + +E + K KGL +I+ IS KN+P WM E+RL
Sbjct: 1 MPMEAQRKKTQLEEMDLSRWDFRYEED-AAFKTRKGLTPEIVETISRAKNDPPWMREFRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + +++P W A+D +++ Y PK+ + D+ + T++KLGIP
Sbjct: 60 HSLETYYKLENPVWGP-DLSALDMNEIVTYLKPKTDMKTS-WKDLPENIRGTFDKLGIPQ 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+E LAG V A +DS V ++E++ GV++ + A+ ++ DLVK +
Sbjct: 118 AEKESLAG-------VGAQYDSEVVYHNMRKEVEDLGVVYCDMETALRDYEDLVKTHFMK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP D+ Y AL+ AV++ GSFVY+PK V+ P+ L +YFR N GTGQFE TLII + G+
Sbjct: 171 MVPPSDHKYVALHGAVWSGGSFVYVPKDVKVPIPLQSYFRQNAPGTGQFEHTLIIVEPGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ ++EGC+AP+ + +HA VEL + A ++YST++NW ++N TKR
Sbjct: 231 DLHFIEGCSAPKYNVLNIHAGCVELYVAEEARLRYSTIENW-------SKNMWNLNTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + I W GS I+ YPS +L GE + EF I + Q++D+GTK+ HLA
Sbjct: 284 HVQ-KKGTIEWVSGSFGSQISMLYPSSVLLGEGAHSEFTGITFAGKGQELDTGTKVFHLA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
TTS + +K IS R +V V + A HS+N C+SL++ + + TIP ++ +
Sbjct: 343 PFTTSSVNTKSISKNGGKCITRSQVMVAKEAVHSKNTVSCESLMLDSISRSDTIPGMDIR 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA +ISD+ ++Y + RG+ E+ A LIV GF + ++LP+E+AVE L
Sbjct: 403 TDDVDIGHEARIGRISDQAIYYLMTRGLGEQEAKTLIVRGFAEPIAKELPLEYAVEMNNL 462
Query: 480 IDISLEGSVG 489
I + +EGS+G
Sbjct: 463 ITLEMEGSIG 472
>gi|55378573|ref|YP_136423.1| hypothetical protein rrnAC1829 [Haloarcula marismortui ATCC 43049]
gi|55231298|gb|AAV46717.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 476
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 183/492 (37%), Positives = 272/492 (55%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D ++ ++ F+ + +A KGL E+ IR IS K+EP+WMLE RL A
Sbjct: 1 MSSDQDHLKETDTEK-RFEFKKEEKSAFEAEKGLTEETIRVISEDKDEPEWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIP 118
++ M P +D D++ Y P + G +D+ E+ T++KLGIP
Sbjct: 60 EQFHEMPMPDGWPGAPDLSEVDVDEIVPYIRPDIETRGGVDDWNDLPEEIQDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E + GVIF + +A+ EH D++K+Y
Sbjct: 120 EAEKNALSG-------VGAQYESEIVYQNMQERWEDKGVIFCDMDKAVQEHEDILKEYFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ A+++ GSFVY+P+ M + YFR+N G GQFE TLIIA+E
Sbjct: 173 TKAVPPSDNKFAALHGAIWSGGSFVYVPEDTTVDMPVQAYFRMNSDGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S V Y+EGC+AP+ E LH+ VE+ +NA ++YSTVQNW YN TK
Sbjct: 233 NSEVHYIEGCSAPKYSEFNLHSGGVEVFVKENAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C + W GS T YPS +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAICEAD-GTMEWVSGSMGSKATMLYPSTVLKGPGATDNHITIAFAGEGQDIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A T S I SK IS YRG V + GA S +CD+L+ N + T+PY+E
Sbjct: 345 NAPETKSTIESKSISKDGGRTNYRGLVHIADGAEDSSTSVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ S ++ HEAT KI DE +FY RG+ ++ A +IV GF+ + ++LP+E+AVE
Sbjct: 405 IQESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVAGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGS+G
Sbjct: 465 RLIELEMEGSLG 476
>gi|323341672|ref|ZP_08081905.1| FeS assembly protein SufB [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322464097|gb|EFY09290.1| FeS assembly protein SufB [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 472
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 195/486 (40%), Positives = 290/486 (59%), Gaps = 18/486 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
E +D ++ ++Y+YGF +++ V KGL+E ++R IS KNEP+WMLE RL AY+
Sbjct: 4 EEKMDDRDRLPNEEYQYGFHDDVEGVVAFDKGLSESVVREISRLKNEPEWMLEIRLKAYQ 63
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
++ K PSW +DFD+ Y+ S +S DDV E+ T+++LGIP E +
Sbjct: 64 SFMDQKMPSWG-ADLSKVDFDEYIYFLR-ASDQVERSWDDVPQEIRNTFDRLGIPEAEAK 121
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L+GV T +DS V + +E++ GV+F + + ++P++VK+Y +VP
Sbjct: 122 YLSGVAT-------QYDSEVVYASMLQEVESKGVLFFDMDTGLRDYPEIVKQYFGKLVPY 174
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN +AALN++V++ GSF+YIPKGV L +YFRIN + GQFERT+II DEG+ V Y
Sbjct: 175 NDNKFAALNTSVWSGGSFIYIPKGVTLDKPLQSYFRINAEQMGQFERTMIIVDEGADVHY 234
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP ++ +HAAVVE+ NA+ +Y+T+QNW +YN VTKR
Sbjct: 235 VEGCTAPIYKKDAMHAAVVEIFVHKNAKCRYTTIQNW-------SSNVYNLVTKRAQVEA 287
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ W G+ IT KYPSC+L GE + G SIA++ Q D+G KM+H A NT
Sbjct: 288 -HGMMEWIDGNIGAYITMKYPSCVLIGEYAKGMTISIAVAGANQWQDAGAKMIHKAPNTQ 346
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SK +S YRG V + A +++ +CD+L++ + T+P ++
Sbjct: 347 STIISKSVSRNGGTVNYRGIVHHDKNAINAKTKIECDTLILDQLSMSDTMPVNVVDTNAS 406
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+EHEA SKIS+E LFY + RG+ EE A I+ GF+ ++L ME+AVE +L+ +
Sbjct: 407 IIEHEARVSKISEEELFYLMSRGLSEEQASETIIMGFLEPFTRELSMEYAVELNQLMKME 466
Query: 484 LEGSVG 489
+EGSVG
Sbjct: 467 MEGSVG 472
>gi|302801235|ref|XP_002982374.1| hypothetical protein SELMODRAFT_116160 [Selaginella moellendorffii]
gi|300149966|gb|EFJ16619.1| hypothetical protein SELMODRAFT_116160 [Selaginella moellendorffii]
Length = 464
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 250/471 (53%), Positives = 327/471 (69%), Gaps = 9/471 (1%)
Query: 20 KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYP 79
K+GF + ++ PKGL+E+ IR IS+K+ EP WML++R+ A+ +W M PSW+ +R+P
Sbjct: 2 KWGFSSKVESVSIPKGLSEETIRLISSKRQEPPWMLDFRMDAFHKWQKMAPPSWSELRHP 61
Query: 80 AIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ-EILAGVQTSKVAVDAV 138
+DF D+ YY+ PK ++ Y++LG+ + E G + +AVDAV
Sbjct: 62 PVDFQDMSYYSEPK--------PSEHAAIVDAYQRLGVDLGPPPESKPGSKPRSMAVDAV 113
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
FDS SV T + EL+ GV F +S+A+ E P++V+ L VVP DNFYAALNSAVF+D
Sbjct: 114 FDSTSVALTHQRELEDGGVFFRSLSQAVREFPEVVRDNLGRVVPASDNFYAALNSAVFSD 173
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
GSF Y+ G + LST FRIN TGQFERTLI+ +EG +++YLEGCTA D NQLH
Sbjct: 174 GSFCYVKAGGGVSIPLSTQFRINAPETGQFERTLIVVEEGGHLTYLEGCTATAHDTNQLH 233
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVEL NA+I Y TVQNWY GD QG+GGIYNFVTKRG C G +S+ISW+Q+ETGSA
Sbjct: 234 AAVVELYCARNAKIDYYTVQNWYSGDQQGRGGIYNFVTKRGLCDGEKSEISWSQVETGSA 293
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
ITWKYPS +LRG+ S G+F+S+A++ QQ D+G+KM+HL KNT S IVSKG+SAG S N
Sbjct: 294 ITWKYPSVVLRGDGSVGKFHSVALTQNQQQADTGSKMIHLGKNTKSFIVSKGVSAGNSTN 353
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
YRG V + AA +RNF+QCDSLLIGN A T P I+ +N S +EHEA+TSK+ DE
Sbjct: 354 CYRGLVQIQPSAAGARNFSQCDSLLIGNKSTASTFPVIQGRNPSSRIEHEASTSKVGDEQ 413
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFY QRGI E+ A A+IV+GF REV+ + EF E +L+ + L+G VG
Sbjct: 414 LFYFRQRGISEDVAAAMIVSGFCREVVDQFVGEFERELPELLRMKLKGCVG 464
>gi|325479153|gb|EGC82250.1| FeS assembly protein SufB [Anaerococcus prevotii ACS-065-V-Col13]
Length = 470
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 179/481 (37%), Positives = 273/481 (56%), Gaps = 18/481 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
D+++++D Y + F D KG+N DI+ IS KKNEPDWM RL + + +
Sbjct: 8 DQLKELDRGYYDF-FNEFEYADITDKGINADIVNEISDKKNEPDWMRRRRLKSLALYEKI 66
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
+PSW +D +D+ Y PKS + + E+ T+++LGIP EQE LAG
Sbjct: 67 DNPSWGP-DLSELDMNDITTYVKPKSDKKSN-WEALPEEIRDTFDRLGIPQAEQESLAG- 123
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A +DS V + ++ L GVIFM S A+ EH D+VK Y +P + Y
Sbjct: 124 ------VGAQYDSEEVYHSIQKHLSDQGVIFMDFSTAVREHEDIVKAYFQKAIPPTLHKY 177
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AAL+ AV++ GS +Y+P+GV + L +Y+R+N G GQFE T+IIA++ + V ++EGC+
Sbjct: 178 AALHGAVWSGGSLIYVPEGVEVDIPLQSYYRLNAPGAGQFEHTMIIAEDNAKVHFIEGCS 237
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP+ + LHA VE+ NAE+++ST++NW +YN TKR + K+
Sbjct: 238 APRYNVVNLHAGSVEIFVGKNAEVRFSTIENW-------SRNMYNLNTKRAIVQ-EGGKV 289
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS ++ YP+ +L GE + E+ I ++ Q ID+G M+HLA NT S ++
Sbjct: 290 IWVSGSFGSKVSMLYPTSVLVGEGASAEYTGITFASNGQYIDNGCSMIHLAPNTYSTALT 349
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K I+AG + R V + + +A SR+ C++L+I + TIP ++ +N + HE
Sbjct: 350 KSITAGSGKSMTRSLVQMKKKSAGSRSTVDCENLMISEESQSDTIPVLDIRNDDVDCGHE 409
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A I +FY + RGIPEE A ++IV GF + ++LP+E+AVE LID+ LEG+
Sbjct: 410 AKIGSIDQGQIFYLMSRGIPEEEAKSMIVRGFAEPISRELPLEYAVEMNHLIDMELEGAN 469
Query: 489 G 489
G
Sbjct: 470 G 470
>gi|255513365|gb|EET89631.1| FeS assembly protein SufB [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 470
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 194/491 (39%), Positives = 287/491 (58%), Gaps = 23/491 (4%)
Query: 1 MVAVRETVDKVRKIDVDQY--KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M V + +Y KYGF ++ KGL+ED +RFIS K+EP WMLE R
Sbjct: 1 MPNNNSEVVQAE----SEYMQKYGFNEKTVYSESKKGLSEDTVRFISKIKSEPKWMLEKR 56
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
LL + + P W I++ D+YYY PK+ + D + ++ RT++KLG+P
Sbjct: 57 LLGLKIFNEKPVPKWGP-DLSDINYADIYYYLKPKAD-KSSNWDSLPEDIKRTFDKLGVP 114
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E++ AG + A +DS V KEEL+ G+IF A+ ++P++++KY
Sbjct: 115 EAEKKFFAGAE-------AQYDSEVVYHHMKEELEAQGIIFTDTDSALKKYPEIMEKYFG 167
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
T++P DN YAALN+AV++ GSF+Y+PK V+ M L YFRIN + GQFERTLIIADEG
Sbjct: 168 TIIPPTDNKYAALNTAVWSGGSFIYVPKNVKVSMPLQAYFRINAEKAGQFERTLIIADEG 227
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ V+Y+EGCTAP + LH+AVVEL+A NA I+Y T+QNW +YN VT+R
Sbjct: 228 ADVTYIEGCTAPIYISSSLHSAVVELIAHKNAHIRYVTIQNW-------SKNVYNLVTQR 280
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ + W GS + KYPS L+ + G+ SIA++ Q DSG K+ HL
Sbjct: 281 AFAY-ENAHVEWIDANIGSRVNMKYPSVFLKERGAKGDVLSIAVAGEGQTQDSGGKIYHL 339
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +TTS+I+SK IS G +YRG + + + A +S++ +CD+LL+ +T PY E
Sbjct: 340 APDTTSQIISKSISKGTGVASYRGLIHIDKKAKNSKSGVKCDALLLDKIAKTNTYPYNEI 399
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ HEA+ + +E +FY RG+ E+ AIA IV GF++ ++ LP+E+++E ++
Sbjct: 400 YADDALVSHEASIGMLGEEEMFYLRSRGLKEDDAIATIVLGFIKPLVDVLPLEYSLELKR 459
Query: 479 LIDISLEGSVG 489
LI + SVG
Sbjct: 460 LIKLDTSNSVG 470
>gi|325849545|ref|ZP_08170783.1| FeS assembly protein SufB [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480026|gb|EGC83103.1| FeS assembly protein SufB [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 476
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 170/487 (34%), Positives = 270/487 (55%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D+ D+D+ Y + D + KGLN++I+ +S KKNEP+WML+ RL +
Sbjct: 7 TEKKFDESTFKDIDRGIYDVIDKFEYSDISDKGLNKEIVEELSRKKNEPEWMLKRRLQSL 66
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ ++PSW ++ D+ Y PK+ D + E+ T+++LGIP EQ
Sbjct: 67 LIFEQTENPSWGP-DLSELNMADITTYVKPKTDKKSN-WDALPEEIKDTFDRLGIPQAEQ 124
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAG V A +DS V + ++ L GVIF A+ EH ++V KY +P
Sbjct: 125 ESLAG-------VGAQYDSEEVYHSIQKHLSDQGVIFTDFDTALKEHEEIVHKYFQRAIP 177
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ YAAL+ AV++ GS +Y+PKGV + L +Y+R+N G GQFE T+IIA+EG+ V
Sbjct: 178 PTLHKYAALHGAVWSGGSLIYVPKGVNVDIPLQSYYRLNAPGAGQFEHTMIIAEEGAKVH 237
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VE+ +AE+++ST++NW +YN TKR
Sbjct: 238 FIEGCSAPKYNVVNLHAGSVEIFVHKDAEVRFSTIENW-------SRNMYNLNTKRAIV- 289
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
++ W GS ++ YP+ +L GE + E+ I ++ Q ID+G M+H A NT
Sbjct: 290 EENGQVEWISGSFGSKVSMLYPTTILNGEGARAEYTGITYASNGQYIDNGCSMIHNAPNT 349
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S ++K I+ G + R V + + A S++ C++L++ + TIP ++ +N
Sbjct: 350 YSTALTKSITQGNGKSMTRSFVKIGKKAKGSKSTVDCENLMLSRESKSDTIPTLDIRNDD 409
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+ HEA + + +FY + RGIPE A ++IV GF V ++LP+E+AVE LID+
Sbjct: 410 VDCGHEAKIGSLDQKQIFYLMSRGIPENEAKSMIVRGFAEPVAKELPLEYAVEMNNLIDM 469
Query: 483 SLEGSVG 489
LEG+ G
Sbjct: 470 ELEGANG 476
>gi|222100196|ref|YP_002534764.1| Iron-regulated ABC transporter membrane component SufB [Thermotoga
neapolitana DSM 4359]
gi|221572586|gb|ACM23398.1| Iron-regulated ABC transporter membrane component SufB [Thermotoga
neapolitana DSM 4359]
Length = 464
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 173/480 (36%), Positives = 280/480 (58%), Gaps = 18/480 (3%)
Query: 11 VRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ +I +D ++ F ++ KAP GLNE +I IS K EP+WML+ RL + + +
Sbjct: 2 MERIIIDDSRFNFIPKVRTAYKAPPGLNERLIEEISHAKGEPEWMLKHRLESLKIFKEWH 61
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P + + +D + Y P + G ++V E+ ++KLGIP E++ LAG
Sbjct: 62 NPRFG-VDISELDLGKIVSYIRPDAKKGTS-WEEVPEEVKEAFDKLGIPEAERKYLAG-- 117
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
V A DS V K+EL+K GVIF+ + A+ E+PDLVK+Y +VP D+ +A
Sbjct: 118 -----VGAQLDSEIVYQNIKKELEKLGVIFLDMESAVREYPDLVKEYFMKLVPSTDHKFA 172
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
AL+ A+++ G+F+Y+P V+ PM L YF ++ G GQFE T+I+A+EGS V+++EGC+A
Sbjct: 173 ALHGAIWSGGTFLYVPANVKVPMPLQAYFLMSNPGMGQFEHTIIVAEEGSEVTFIEGCSA 232
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P+ + LHA +VE+ A++KY T+QNW YN TKR S ++
Sbjct: 233 PRYNVINLHAGMVEIYVKRGAKVKYLTIQNW-------SKNTYNLNTKRSIVEEEGS-MT 284
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS T YP +L+G+ + E SI + Q +D+G+K++HLA T+S + +K
Sbjct: 285 WVSGSLGSYKTMLYPMTILKGKGARAESMSITYAGPGQHMDTGSKVVHLAPYTSSLVSAK 344
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
IS G YRG + + + A +S+ +C +L++ N + T+P IE + ++ HEA
Sbjct: 345 SISLGGGWAFYRGLLKITKEAENSKASVECAALMLDNRSKSDTVPIIEVETDRADVGHEA 404
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I ++ +FY + RG+ E+ A ++IV GFV V+++LP E+AVE KL+++ +E S+G
Sbjct: 405 RIGRIGEDQIFYLMSRGLSEQEAKSMIVKGFVEPVVKELPFEYAVELNKLLELEIEKSIG 464
>gi|257388958|ref|YP_003178731.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
gi|257171265|gb|ACV49024.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
Length = 476
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 179/492 (36%), Positives = 276/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D ++ ++ F+ + +A KGL E+ IR IS K+EP+WMLE RL A
Sbjct: 1 MSSDQDHLKETDTEK-RFEFKKEEKSAFEAEKGLTEETIRVISEDKDEPEWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIP 118
+W + P +D D++ Y P + G +D+ E+ T++KLGIP
Sbjct: 60 EQWHELPMPDDWPGAPDISEVDVDEIIPYIRPDIETRGGVDDWNDLPEEIQDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +E+ ++ GV+F + +A+ EH ++V+++
Sbjct: 120 EAEKNALSG-------VGAQYESEIVYQNMQEQWEEKGVVFCDMDKAVQEHEEIVREHFM 172
Query: 179 -TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VP DN +AAL+ A+++ GSFVY+P+ M + YFR+N G GQFE TLIIA+E
Sbjct: 173 TKAVPPSDNKFAALHGAIWSGGSFVYVPEDTSVDMPIQAYFRMNSDGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S V Y+EGC+AP+ E LH+ VE+ +NA ++YSTVQNW YN TK
Sbjct: 233 SSEVHYIEGCSAPKYSEFNLHSGGVEVFVGENAHVQYSTVQNW-------SKNTYNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R C + W GS T YPS +L+G + +IA++ Q ID+G K+ H
Sbjct: 286 RAICEAD-GTMEWVSGSMGSKATMLYPSTVLKGPGATDNHITIAMAGEGQNIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A +T S I SK IS YRG V + GA + +CD+L+ N + T+PY+E
Sbjct: 345 NAPDTKSTIESKSISKDGGRTNYRGLVHIADGAEDASTSVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ S ++ HEAT KI DE +FY RG+ ++ A +IV GF+ + ++LP+E+AVE
Sbjct: 405 IQESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVAGFIEPLTEELPIEYAVEMN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGS+G
Sbjct: 465 RLIELEMEGSLG 476
>gi|256370750|ref|YP_003108575.1| FeS assembly protein SufB [Candidatus Sulcia muelleri SMDSEM]
gi|256009542|gb|ACU52902.1| FeS assembly protein SufB [Candidatus Sulcia muelleri SMDSEM]
Length = 474
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 274/473 (57%), Positives = 345/473 (72%), Gaps = 11/473 (2%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
YKYGF +N++ +K PKG+N+ II +S KKNEPDW+L+ RL +Y+ W M P+W +
Sbjct: 13 SDYKYGFYSNLESEKLPKGINKKIIINLSKKKNEPDWLLKRRLKSYKIWKKMFYPNWGNL 72
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
Y DF ++ YY+A K S + + L D
Sbjct: 73 LYNIPDFQNISYYSALKMKKKKISKKLKFTFKKLNLTFKKKINKAKMAL----------D 122
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
+FDSVSV TTFK+ L + G+IF S+AI ++P+++KKYL +VP+ DNFY+ALNSAVF
Sbjct: 123 IIFDSVSVTTTFKKSLAEKGIIFCSFSKAIKKYPEIIKKYLGKIVPIEDNFYSALNSAVF 182
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+DGSF YIP+ V CP+ELSTYFRINE G GQFERTL+IAD+ SYVSYLEGCTAPQR ENQ
Sbjct: 183 SDGSFCYIPQNVYCPIELSTYFRINESGIGQFERTLLIADKNSYVSYLEGCTAPQRKENQ 242
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
LHAAVVEL+AL+ AEIKYSTVQNW+PG+ G GG++NFVTKRG C +SKISWTQ+ETG
Sbjct: 243 LHAAVVELIALEGAEIKYSTVQNWFPGEKTGTGGVFNFVTKRGLC-EKKSKISWTQIETG 301
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
SAITWKYPSC+L+G+ S GEFYSI + FQQ D+GTKM+HL K T S I+SKGISAG+S
Sbjct: 302 SAITWKYPSCILKGDYSVGEFYSITFTKNFQQSDTGTKMIHLGKKTKSTIISKGISAGYS 361
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
N YRG V + A +SRNF+QCDSL+IGN C ++T P+I+ KN +EHEATTSKI +
Sbjct: 362 KNNYRGLVKITPNANYSRNFSQCDSLIIGNYCSSNTYPFIKGKNFCSQVEHEATTSKIGE 421
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
LFYC QRGI E AI+LIV GF +E+L +LP+EFA+EA+KL++I LEGSVG
Sbjct: 422 NQLFYCNQRGINLEKAISLIVTGFSKEILDRLPLEFAIEARKLLEIQLEGSVG 474
>gi|239617860|ref|YP_002941182.1| FeS assembly protein SufB [Kosmotoga olearia TBF 19.5.1]
gi|239506691|gb|ACR80178.1| FeS assembly protein SufB [Kosmotoga olearia TBF 19.5.1]
Length = 464
Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 180/479 (37%), Positives = 287/479 (59%), Gaps = 18/479 (3%)
Query: 12 RKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
KI +D ++ F T+ K+ GLN++IIR IS K+EP WMLE RL + R + + D
Sbjct: 3 EKIHIDDSRFNFRTDTSYQYKSAPGLNKEIIRDISRHKDEPHWMLEKRLESLRIFEELHD 62
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P++ + ++D ++ Y P + ++V E+ T+EKLGIP E++ LAG
Sbjct: 63 PNFG-VDTSSLDIGEIIPYLKPDAGKETS-WEEVPDEIKETFEKLGIPQAERKALAG--- 117
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
V A +DS V K EL++ GVIF+ + A+ ++P+LVKKY +VP D+ YAA
Sbjct: 118 ----VGAQYDSEVVYQHIKNELEEIGVIFLDMETAVKKYPELVKKYFMRLVPATDHKYAA 173
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
L+ A+++ GSFVY+P+ VR P+ L YFR+N GTGQFE TLIIAD GS + ++EGC+AP
Sbjct: 174 LHGAIWSGGSFVYVPENVRVPLPLQAYFRMNMAGTGQFEHTLIIADRGSELHFIEGCSAP 233
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ + + LHA +VE+ ++ A+++YST+QNW YN TKR + W
Sbjct: 234 RYNVHNLHAGMVEIYVMEGAKVRYSTIQNW-------SKNTYNLNTKRALV-EKDGVMEW 285
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS T YP+ +L GE + + +I + Q +D+G+K++HLA NT+S + ++
Sbjct: 286 VSGSMGSMKTMLYPTTILNGEGARAQHLAITYAGPGQHMDTGSKVVHLAPNTSSTVDARS 345
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS G YRG + V A ++ QC +L++ N+ + T+P I+ + ++ HEA
Sbjct: 346 ISIGGGWAFYRGLLYVSENAESTKASVQCTALMMDNDSKSDTVPIIDVRTDKADIGHEAR 405
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+IS++ ++Y + RG+ E A A+IV GF+ + ++LP+E+AVE +LI++ +E S+G
Sbjct: 406 IGRISEDQIYYLMTRGLSEAEARAMIVRGFMEPITRELPIEYAVELNRLINLEIESSIG 464
>gi|258647006|ref|ZP_05734475.1| FeS assembly protein SufB [Dialister invisus DSM 15470]
gi|260404446|gb|EEW97993.1| FeS assembly protein SufB [Dialister invisus DSM 15470]
Length = 470
Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 184/487 (37%), Positives = 274/487 (56%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E K R D+++ Y + ++ KA +GL EDIIR ISA+K EP WMLE RL A
Sbjct: 1 MAEEKKKSRVDDINRSVYDIKDEVEFSYKADRGLTEDIIRKISAEKEEPSWMLEKRLQAL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
R + ++ P WA +D D + Y PK+ + +D+ + T+++LGIP E+
Sbjct: 61 RIYESLDVPPWAP-DISELDMDHIDTYIRPKTDRKAR-WEDLPQNIRDTFDRLGIPEAEK 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG V A +DS V ++ELK+ GVI++ A+ E+ DL++ Y ++
Sbjct: 119 KSLAG-------VGAQYDSEVVYHNVQKELKEQGVIYVDFETAVKEYEDLIRPYFGQLIT 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ +AAL+ AV++ GSFVY+PKGV M L +YFR+N G GQFE TLII +EG+
Sbjct: 172 PNYHKFAALHYAVWSGGSFVYVPKGVHVRMPLQSYFRLNAPGAGQFEHTLIIVEEGADCH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VEL A ++YST++NW +YN TK+
Sbjct: 232 FIEGCSAPRYNVANLHAGAVELFVKKGASLRYSTIENW-------SKNMYNLNTKKAVVE 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
S + W GS + YP +LRG S EF I + Q +D+G+K+ L KNT
Sbjct: 285 EDGSMV-WVSGSFGSHTSCLYPDTILRGNHSTCEFTGITFAGKGQFLDTGSKVEALGKNT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
I SK IS YRG V + A+ + C+SL++ N + TIP I +NS
Sbjct: 344 HVTINSKSISKAGGTALYRGAVVIGPEASGMKGAISCESLMLDNESRSDTIPAIIIENSD 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+L HEA +IS+E ++Y + RG+ EE A A++V GF + + LP+E+AVE +LID+
Sbjct: 404 IDLGHEAKIGRISEEDIYYLMSRGMSEEDARAMLVRGFAEPISKALPLEYAVEMNRLIDL 463
Query: 483 SLEGSVG 489
EG++G
Sbjct: 464 EFEGAIG 470
>gi|15644121|ref|NP_229170.1| hypothetical protein TM1369 [Thermotoga maritima MSB8]
gi|4981931|gb|AAD36440.1|AE001791_2 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 464
Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats.
Identities = 173/480 (36%), Positives = 281/480 (58%), Gaps = 18/480 (3%)
Query: 11 VRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ ++ +D ++ F ++ KAP GL+E +I IS K+EP+WML+ RL + + +
Sbjct: 2 MERLIIDDSRFNFVPKVKTAYKAPPGLDEKLIMEISRAKDEPEWMLKHRLESLKVFNEWH 61
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P + + +D + Y P + ++V E+ ++KLGIP E++ LAG
Sbjct: 62 NPRFG-VDISGLDLGKIVSYIKPDAKKSTS-WEEVPEEVKEAFDKLGIPEAERKYLAG-- 117
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
V A DS V K+EL+K GVIF+ + A+ E+PDLVKKY +VP+ D+ +A
Sbjct: 118 -----VGAQLDSEIVYQNMKKELEKMGVIFLDMESAVREYPDLVKKYFMKLVPITDHKFA 172
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
AL+ A+++ G+F+Y+P GV+ PM L YF ++ G GQFE T+I+A+EGS V+++EGC+A
Sbjct: 173 ALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMSNPGMGQFEHTIIVAEEGSEVTFIEGCSA 232
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P+ + LHA +VE+ A++KY T+QNW YN TKR S ++
Sbjct: 233 PRYNIINLHAGMVEIYVKKGAKVKYLTIQNW-------SKNTYNLNTKRSIVDEEGS-MT 284
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS T YP +L+G+ + E SI + Q +D+G+K++HLA T+S + +K
Sbjct: 285 WVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHMDTGSKVVHLAPYTSSIVSAK 344
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
IS G YRG + + + A S+ +C +L++ N + T+P IE + ++ HEA
Sbjct: 345 SISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSKSDTVPIIEVETDRADVGHEA 404
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I ++ +FY + RG+ E+ A A+IV GFV V+++LP E+AVE KL+++ +E S+G
Sbjct: 405 RIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELPFEYAVELNKLLELEIEKSIG 464
>gi|289450211|ref|YP_003474705.1| FeS assembly protein SufB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184758|gb|ADC91183.1| FeS assembly protein SufB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 483
Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 180/485 (37%), Positives = 281/485 (57%), Gaps = 18/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E + I +++ +I V K KGL+E +R IS K EP WM + R+ AY
Sbjct: 16 EDKIQAESIVRSDFEHKIYDGDISVLKFSKGLDEAKVREISRLKKEPAWMTDIRVKAYHT 75
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+L P++ +D DD+ YY + D V ++ T++KLGIP E++
Sbjct: 76 FLKTPYPTFGP-DLSGLDLDDITYYNRATPK-AESTWDQVPEKIKETFDKLGIPEAEKQY 133
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAGV T ++S V +++L++ GV+F+ + ++P+L +++ +VP
Sbjct: 134 LAGVTT-------QYESEVVYHKAQQKLQELGVVFLDTDTGLKKYPELFERFFGKLVPAA 186
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN +AALN+AV++ GSF+Y+PKGV+CP + +YFRIN + GQFERTLII D+ + + Y+
Sbjct: 187 DNKFAALNTAVWSGGSFIYVPKGVKCPQPVQSYFRINSERLGQFERTLIIVDDDADLHYI 246
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP + LHAA+VE+ NA+ +YSTVQNW +YN VTKR C
Sbjct: 247 EGCTAPTYTTSSLHAAIVEIFVGKNAKCRYSTVQNW-------SNNVYNLVTKRSSCEA- 298
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ W G+ +T YPSC LRGE + G S+++++ Q D G +M+H A NT+S
Sbjct: 299 GGHMEWVDGNIGAGVTMLYPSCYLRGEGAHGSMISVSMADRGQIQDIGARMIHTAPNTSS 358
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+I+SK +S N YRG V A ++++ +CD+L++ + TIP +
Sbjct: 359 QIISKSLSRNGGNAIYRGTVEHTPAAHGAKSYIECDTLILDKESESDTIPTYRIREGVSE 418
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+EHE T SK+++E +FY + RG+ EEAA +I++GF+ ++LPME+AVE +L+ + +
Sbjct: 419 IEHEGTVSKVNEEQIFYLMSRGLTEEAATEMIISGFIEPFTRELPMEYAVELNQLLKLDM 478
Query: 485 EGSVG 489
SVG
Sbjct: 479 SNSVG 483
>gi|160946987|ref|ZP_02094190.1| hypothetical protein PEPMIC_00949 [Parvimonas micra ATCC 33270]
gi|158447371|gb|EDP24366.1| hypothetical protein PEPMIC_00949 [Parvimonas micra ATCC 33270]
Length = 479
Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 181/490 (36%), Positives = 276/490 (56%), Gaps = 20/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + R+ +V ++D Y + ++ K KGL DI+ IS +KNEPDWMLE RL
Sbjct: 9 MTSERK-KTQVEEMDRGVY--DIKNEVRYFSKTEKGLTRDIVMQISKEKNEPDWMLELRL 65
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + K+P+W +D +++ Y P + + + +++ ++ T++ LGIP
Sbjct: 66 KALEVFEKSKNPNWGP-DLSPVDINEITTYIRPDAKM-SEDWNELPEDIKGTFDALGIPE 123
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E + ++ V A +DS V + E+++K GVI+ A+ E+PD++K+Y T
Sbjct: 124 AEYK------SALSGVGAQYDSEVVYHSLTEKMRKQGVIYTDFETAVREYPDIIKEYFMT 177
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+ D+ YAAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII +EG+
Sbjct: 178 CIKPEDHRYAALHYAVWSGGSFVYVPKGVNVSIPLQSYFRLNAPGAGQFEHTLIIVEEGA 237
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
Y ++EGC+AP+ + +HA VEL NA ++YST++NW +YN TKR
Sbjct: 238 YCHFIEGCSAPKYNVLNVHAGAVELFIKKNATLRYSTIENW-------SRNMYNLNTKRA 290
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
I W GS ++ YP +LRGE + EF I + Q +D+G K++H A
Sbjct: 291 IV-DENGTIEWVSGSFGSKVSLLYPMSVLRGEGAKSEFTGITFAGKDQYLDTGAKVIHAA 349
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+S I SK IS G YRG V V ++ C+SL++ + TIP I +
Sbjct: 350 PRTSSSINSKSISKGNGVAIYRGLVDVKPNCPGCKSTVTCESLMLDQESQSDTIPVINIQ 409
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
S +L HEA +I D+ +FY + RGIPEE A A+IV GF + ++LP+E+AVE L
Sbjct: 410 TSDIDLGHEAKIGRIDDDVIFYLMTRGIPEEEAKAMIVRGFAEPIAKELPLEYAVEMNAL 469
Query: 480 IDISLEGSVG 489
I++ LEG++G
Sbjct: 470 INLELEGTIG 479
>gi|281412851|ref|YP_003346930.1| FeS assembly protein SufB [Thermotoga naphthophila RKU-10]
gi|281373954|gb|ADA67516.1| FeS assembly protein SufB [Thermotoga naphthophila RKU-10]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 173/480 (36%), Positives = 281/480 (58%), Gaps = 18/480 (3%)
Query: 11 VRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ ++ +D ++ F ++ KAP GL+E +I IS K+EP+WML+ RL + + +
Sbjct: 2 MERLIIDDSRFNFVPKVKTAYKAPPGLDEKLIMEISRAKDEPEWMLKHRLESLKVFNEWH 61
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P + + +D + Y P + ++V E+ ++KLGIP E++ L+G
Sbjct: 62 NPRFG-VDISGLDLGKIVSYIKPDAKKSTS-WEEVPEEVKEAFDKLGIPEAERKYLSG-- 117
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
V A DS V K+EL+K GVIF+ + A+ E+PDLVKKY +VP+ D+ +A
Sbjct: 118 -----VGAQLDSEIVYQNMKKELEKMGVIFLDMESAVREYPDLVKKYFMKLVPITDHKFA 172
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
AL+ A+++ G+F+Y+P GV+ PM L YF ++ G GQFE T+I+A+EGS V+++EGC+A
Sbjct: 173 ALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMSNPGMGQFEHTIIVAEEGSEVTFIEGCSA 232
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P+ + LHA +VE+ A++KY T+QNW YN TKR S ++
Sbjct: 233 PRYNIINLHAGMVEIYVKKGAKVKYLTIQNW-------SKNTYNLNTKRSIVDEEGS-MT 284
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS T YP +L+G+ + E SI + Q ID+G+K++HLA T+S + +K
Sbjct: 285 WVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHIDTGSKIVHLAPYTSSIVSAK 344
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
IS G YRG + + + A S+ +C +L++ N + T+P IE + ++ HEA
Sbjct: 345 SISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSKSDTVPIIEVETDRADVGHEA 404
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I ++ +FY + RG+ E+ A A+IV GFV V+++LP E+AVE KL+++ +E S+G
Sbjct: 405 RIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELPFEYAVELNKLLELEIEKSIG 464
>gi|304440325|ref|ZP_07400214.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371077|gb|EFM24694.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 473
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 177/489 (36%), Positives = 271/489 (55%), Gaps = 21/489 (4%)
Query: 3 AVRETVDKVRKIDVDQY--KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ ++ +D Y K FE + + GL+E+I+R IS +KNEPDWMLE RL
Sbjct: 4 KMERKKTQIDDMDRGIYDIKNKFEYRSKTET---GLSEEIVRQISYEKNEPDWMLEIRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + + ++P W +D D + Y P + + +V ++ T++KLGIP
Sbjct: 61 ALKIFYEKENPVWGP-DLSEVDMDKVTTYIRPNADMT-DDWKNVPDDIRDTFDKLGIPEA 118
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ L V A +DS V ++ L GVI+ A+ E+P++V+KY
Sbjct: 119 EKDAL------LSGVGAQYDSEVVYHNIQKYLLDQGVIYTDFDSAVKEYPNIVRKYFGKC 172
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+ + YAAL+ AV++ GSFVY+PKGV+ + L +YFR+N G GQFE TLII ++ +Y
Sbjct: 173 INPTLHKYAALHYAVWSGGSFVYVPKGVKVDVPLQSYFRLNAPGAGQFEHTLIIIEDDAY 232
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
++EGC+AP+ + +HA VEL +N+ ++YST++NW +YN TKR
Sbjct: 233 CHFIEGCSAPKYNVLNIHAGAVELFVGENSTLRYSTIENW-------SRNMYNLNTKRAH 285
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
I W GS ++ YP +L GE + E+ I+ + Q ID+G +++H A
Sbjct: 286 V-EKNGLIQWISGSFGSKVSMLYPCSVLLGEHASSEYTGISFAGTDQNIDTGAQVIHAAP 344
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
TTS + SK IS YRG V + A HS++ C+SL++ + TIP I+ +N
Sbjct: 345 YTTSTVDSKSISKSGGIGVYRGLVKITENAHHSKSSVSCESLMLDPESRSDTIPVIDIRN 404
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ HEA +ISDE +FY + RGIPE A A++V GF V ++LPME+AVE LI
Sbjct: 405 KDVDFGHEAKIGRISDEVIFYLMSRGIPEGEARAMVVRGFADPVAKELPMEYAVEMNNLI 464
Query: 481 DISLEGSVG 489
++ LEG++G
Sbjct: 465 NLELEGAIG 473
>gi|170289249|ref|YP_001739487.1| FeS assembly protein SufB [Thermotoga sp. RQ2]
gi|170176752|gb|ACB09804.1| FeS assembly protein SufB [Thermotoga sp. RQ2]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 172/480 (35%), Positives = 281/480 (58%), Gaps = 18/480 (3%)
Query: 11 VRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK 69
+ ++ +D ++ F ++ KAP GL+E +I IS K+EP+WML+ RL + + +
Sbjct: 2 MERLIIDDSRFNFVPKVKTAYKAPPGLDEKLIMEISRAKDEPEWMLKHRLESLKVFNEWH 61
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
+P + + +D + Y P + ++V E+ ++KLGIP E++ L+G
Sbjct: 62 NPRFG-VDISGLDLGKIVSYIKPDAKKSTS-WEEVPEEVKEAFDKLGIPEAERKYLSG-- 117
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
V A DS V K+EL+K GVIF+ + A+ E+PDLVKKY +VP+ D+ +A
Sbjct: 118 -----VGAQLDSEIVYQNMKKELEKMGVIFLDMESAVREYPDLVKKYFMKLVPITDHKFA 172
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
AL+ A+++ G+F+Y+P GV+ PM L YF ++ G GQFE T+I+A+EGS V+++EGC+A
Sbjct: 173 ALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMSNPGMGQFEHTIIVAEEGSEVTFIEGCSA 232
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P+ + LHA +VE+ A++KY T+QNW YN TKR S ++
Sbjct: 233 PRYNIINLHAGMVEIYVKKGAKVKYLTIQNW-------SKNTYNLNTKRSIVDEEGS-MT 284
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS T YP +L+G+ + E SI + Q +D+G+K++HLA T+S + +K
Sbjct: 285 WVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHMDTGSKIVHLAPYTSSIVSAK 344
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
IS G YRG + + + A S+ +C +L++ N + T+P IE + ++ HEA
Sbjct: 345 SISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSKSDTVPIIEVETDRADVGHEA 404
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I ++ +FY + RG+ E+ A A+IV GFV V+++LP E+AVE KL+++ +E S+G
Sbjct: 405 RIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELPFEYAVELNKLLELEIEKSIG 464
>gi|256847558|ref|ZP_05553004.1| FeS assembly protein SufB [Lactobacillus coleohominis 101-4-CHN]
gi|256716222|gb|EEU31197.1| FeS assembly protein SufB [Lactobacillus coleohominis 101-4-CHN]
Length = 473
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 187/487 (38%), Positives = 282/487 (57%), Gaps = 19/487 (3%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ +++ + Y+YGF +I+ + GL ED +R I +K+EP+WML RL AY
Sbjct: 4 EDDKKAIKRFSKEHYEYGFHDDIKPIFSTGVGLTEDTVREIFRRKHEPEWMLNIRLNAYH 63
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
++L MK P + +D L Y+ P V +S DV E+ T+EK+G+P E++
Sbjct: 64 QYLKMKLPDFGP-DLTKLDLSQLRYFQRPTDHVA-RSWSDVPEEMKTTFEKMGVPEAERQ 121
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG A ++S V K +L G++FM A+ ++P++VKKY + +V
Sbjct: 122 YLAGAT-------AQYESEVVYANLKRDLASHGILFMDTDTAVQKYPEIVKKYFAQLVHP 174
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN +AALN+AV++ G+F+Y+PKGV L ++FRIN + TGQFERTLI+ DE + V+Y
Sbjct: 175 DDNIFAALNTAVWSGGTFIYVPKGVHADEPLQSFFRINAENTGQFERTLIVVDEDASVNY 234
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGCTAP E+ LHAAVVE+ +Y+T+QNW P +Y+ TKR
Sbjct: 235 VEGCTAPVYSEDSLHAAVVEVFVKPRGFCRYTTIQNWSP-------NVYSLETKRAVA-D 286
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ-QIDSGTKMLHLAKNT 362
+ + W GS +T KYPS LRG ++ G SIA +NG D+G +M+H A T
Sbjct: 287 ENAVMEWVDGNLGSKVTMKYPSVYLRGRRAKGTMLSIAFANGKVVDQDTGARMIHQAPET 346
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S I+SK + YRG+V + A S + +CD++++ ++ + TIP +
Sbjct: 347 SSTIISKSLCRAGGVCDYRGEVKMDENAHGSSSHVECDTIIMDDDSSSDTIPLNKVAVGD 406
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEA SK+S+E L+Y + RG+ EE A +IV GF+ ++LPME+AVE +LID
Sbjct: 407 VAMEHEAKVSKVSEEELYYLMSRGLSEEEATKMIVMGFIEPFTKQLPMEYAVELNRLIDF 466
Query: 483 SLEGSVG 489
+EGSVG
Sbjct: 467 QMEGSVG 473
>gi|257372917|ref|YP_003175691.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
gi|257167641|gb|ACV49333.1| FeS assembly protein SufB [Halomicrobium mukohataei DSM 12286]
Length = 475
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 169/475 (35%), Positives = 265/475 (55%), Gaps = 21/475 (4%)
Query: 21 YGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS--WARIR 77
+ F+ ++ K+ GL E +R ISA+K+EP+WML+ RL A R+ + P +
Sbjct: 16 FDFKNDVLAEFKSQTGLTEQTVRLISAEKDEPEWMLQRRLDALERYRQLPMPEGWPGQPD 75
Query: 78 YPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
ID D + Y P + S +++ ++ T+++LGIP E++ L+G
Sbjct: 76 LSEIDVDGIVPYLRPDLETDDSVDSWEELPDDIAATFDRLGIPEAEKQALSGA------- 128
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSA 194
A ++S V ++ L++ GVIF + A+ EHP+LV+++ T VP DN +AAL+ A
Sbjct: 129 GAQYESEVVYQNMQDHLEEQGVIFCDMDTAVQEHPELVREHFMTTCVPPSDNKFAALHGA 188
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSFVY+P+GV M L YFR+N +G GQFE ++IA+ S + +EGC+AP
Sbjct: 189 VWSGGSFVYVPEGVTVEMPLQAYFRMNAEGMGQFEHKIVIAEPDSELHLIEGCSAPHYGT 248
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LH+ VE+ + A ++YSTVQNW YN TKR + W
Sbjct: 249 HNLHSGCVEVFVGEGAHVQYSTVQNW-------STNTYNLNTKRAIVEAD-GTMEWVSGS 300
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS T YP+ +L+G + +IA + Q ID+G K+ H A +T S + SK IS
Sbjct: 301 MGSKATMLYPASVLKGPGATDNHITIAFAGEGQNIDTGAKVYHNAPDTHSTVESKSISKD 360
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + GA + +CD+L+ N + T+PY+E + S ++ HEAT KI
Sbjct: 361 GGRTNYRGLVHIADGAEDASTSVECDALMFDNESTSDTMPYMEIQESKVDVAHEATVGKI 420
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE +FY RG+ ++ A +IV GF+ + ++LP+E+AVE +LI++ +EGS+G
Sbjct: 421 GDEDVFYLQSRGLDDDDAKQMIVAGFIEPLTEELPIEYAVEMNRLIELEMEGSLG 475
>gi|257051464|ref|YP_003129297.1| FeS assembly protein SufB [Halorhabdus utahensis DSM 12940]
gi|256690227|gb|ACV10564.1| FeS assembly protein SufB [Halorhabdus utahensis DSM 12940]
Length = 475
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 183/476 (38%), Positives = 274/476 (57%), Gaps = 21/476 (4%)
Query: 20 KYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP-SW-ARI 76
++ F+ +A GLNE+ +R IS K+EP+WML+ RL A + M P W +
Sbjct: 15 RFEFKKEQSSAFEAEVGLNEETVRKISEDKDEPEWMLDRRLRALEHYQQMPMPSDWPGQP 74
Query: 77 RYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
++ +D+ Y P + G + DD+ E+ T++KLGIP EQ+ L+G
Sbjct: 75 DLSEVNVEDIIPYIRPDIEARGGAEEWDDLPDEIQDTFDKLGIPEAEQQALSG------- 127
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNS 193
V A ++S V +E+ ++ GV+FM + +A+ EHP+LV++Y VP DN +AAL+
Sbjct: 128 VGAQYESEIVYQNMQEQWEEKGVVFMDMDKAVQEHPELVREYFMTKSVPPSDNKFAALHG 187
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVYIP+GV M + YFR+N +G GQFE TLIIA+E S V Y+EGC+APQ
Sbjct: 188 AVWSGGSFVYIPEGVTVQMPIQAYFRMNSEGMGQFEHTLIIAEENSEVHYIEGCSAPQYA 247
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH+ VE+ + A ++YSTVQNW YN TKR + W
Sbjct: 248 RHNLHSGGVEVFVKEGAHVQYSTVQNW-------SKNTYNLNTKRAIVEAD-GTMEWISG 299
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS T YP+ +L+G + +IA + Q ID+G K+ H A +T S I SK IS
Sbjct: 300 SMGSKATMLYPATILKGPGATDNHITIAFAGEGQNIDTGAKVYHNAPDTKSTIESKSISK 359
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG V + GA +S +CD+L+ N+ + T+PY+E + S ++ HEAT K
Sbjct: 360 DGGRTNYRGLVHISDGAENSSTNVECDALMFDNDSTSDTMPYMEIQESQVDVAHEATVGK 419
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
I DE +FY RG+ ++ A +IV GF+ + ++LP+E+AVE +LI++ +EGS+G
Sbjct: 420 IGDEDVFYLQSRGLDDDDAKQMIVAGFIEPITEELPIEYAVELNRLIELEMEGSLG 475
>gi|15639600|ref|NP_219050.1| hypothetical protein TP0612 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025838|ref|YP_001933610.1| hypothetical protein TPASS_0612 [Treponema pallidum subsp. pallidum
SS14]
gi|3322910|gb|AAC65588.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018413|gb|ACD71031.1| hypothetical protein TPASS_0612 [Treponema pallidum subsp. pallidum
SS14]
Length = 479
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 174/476 (36%), Positives = 274/476 (57%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ + Y + + KGLN ++ IS +K EP WML+ RL + R ++ P W
Sbjct: 20 DIKRGIYDVKDAVTYTYSTGKGLNAQVVEKISRRKREPQWMLDLRLRSLRYFMKRPMPEW 79
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D ++ +Y +S DDV E+ +T+++LGIP E+ LAG
Sbjct: 80 G-ADISDLDIQEIVHYIVSDFKPIAESWDDVPEEIKKTFDRLGIPEAERRSLAG------ 132
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V + +L++ GV+++ + A+ +H D+V+ + ++ ++ +AAL+
Sbjct: 133 -VGAQYDSEVVYHNLRADLEQQGVVYLDMESAVHKHEDIVRAHFMHLIKPNEHKFAALHG 191
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+PKGV+ + L +YFR+N +GQFE TLII DEG+ + ++EGC+AP+
Sbjct: 192 AVWSGGSFVYVPKGVQVDLPLQSYFRLNANQSGQFEHTLIIVDEGASLHFIEGCSAPKYY 251
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+N LHA VEL NA ++YST++NW +YN TKR I W
Sbjct: 252 KNALHAGAVELYVKKNARLRYSTIENW-------SRNLYNLNTKRAIV-DEDGVIEWISG 303
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T YP +LRG++S EF I ++ Q +D+GTK +HL +NT S + ++ IS
Sbjct: 304 SFGSRVTMLYPMSILRGDRSRSEFTGITFASAGQYLDTGTKTVHLGRNTVSEVHARSISK 363
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG +S+ A ++ +C+SL++ N TIP I+ + + ++ HEA +
Sbjct: 364 NGGTANYRGLLSIGPKADGAKAVAECESLMLDNQSHTDTIPIIDVRTDNVDIGHEAKIGR 423
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
ISD +FY +QRG+ E+ AI+LIV GFV V ++LP+E+AVE LI I LEG++G
Sbjct: 424 ISDRVVFYLMQRGLDEQTAISLIVRGFVEPVSKELPLEYAVELNNLISIELEGAIG 479
>gi|256545625|ref|ZP_05472983.1| FeS assembly protein SufB [Anaerococcus vaginalis ATCC 51170]
gi|256398702|gb|EEU12321.1| FeS assembly protein SufB [Anaerococcus vaginalis ATCC 51170]
Length = 476
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 170/487 (34%), Positives = 269/487 (55%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D+ D+D+ Y + D + KGLN+ I+ +S KKNEP+WML+ RL +
Sbjct: 7 TEKKFDESSFKDIDRGIYDVIDKFEYSDISDKGLNKKIVEELSKKKNEPEWMLKRRLQSL 66
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ ++PSW ++ D+ Y PK+ D + E+ T+++LGIP EQ
Sbjct: 67 LIFEKTENPSWGP-DLSELNMADITTYVKPKTDKKSN-WDALPEEIKDTFDRLGIPQAEQ 124
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E LAG V A +DS V + ++ L GVIF A+ EH ++V KY +P
Sbjct: 125 ESLAG-------VGAQYDSEEVYHSIQKHLSDQGVIFTDFDTALREHEEIVHKYFQRAIP 177
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ YAAL+ AV++ GS +Y+PKGV + L +Y+R+N G GQFE T+IIA+EG+ V
Sbjct: 178 PTLHKYAALHGAVWSGGSLIYVPKGVNVDIPLQSYYRLNAPGAGQFEHTMIIAEEGAKVH 237
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VE+ +AE+++ST++NW +YN TKR
Sbjct: 238 FIEGCSAPRYNVVNLHAGSVEIFVHKDAEVRFSTIENW-------SRNMYNLNTKRAIV- 289
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
++ W GS ++ YP+ +L GE + E+ I ++ Q ID+G M+H A NT
Sbjct: 290 EENGQVEWISGSFGSKVSMLYPTTILNGEGARAEYTGITYASNGQYIDNGCSMIHNAPNT 349
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S ++K I+ G + R V + + A S++ C++L++ + TIP ++ +N
Sbjct: 350 YSTALTKSITQGNGKSMTRSYVKIGKNAKGSKSTVDCENLMLSRESKSDTIPTLDIRNDE 409
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+ HEA + + +FY + RGIPE A ++IV GF V ++LP+E+AVE LID+
Sbjct: 410 VDCGHEAKIGSLDQKQIFYLMSRGIPENEAKSMIVRGFAEPVAKELPLEYAVEMNNLIDM 469
Query: 483 SLEGSVG 489
LEG+ G
Sbjct: 470 ELEGANG 476
>gi|269216597|ref|ZP_06160451.1| FeS assembly protein SufB [Slackia exigua ATCC 700122]
gi|269130126|gb|EEZ61208.1| FeS assembly protein SufB [Slackia exigua ATCC 700122]
Length = 470
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 164/488 (33%), Positives = 263/488 (53%), Gaps = 20/488 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + +V ID Y + +E ++ GL +I+ IS++K+EP WML++RL +
Sbjct: 1 MPKKRTEVADIDRSMYDFRYEEK-DFERVDAGLTPEIVEEISSRKDEPQWMLDFRLKSLE 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ M P W +D D++ Y P + + + ++ T+++LGIP E+
Sbjct: 60 TYHRMATPDWGP-SIAGLDMDNIVTYVKPNTDQKSD-WESLPDDVKNTFDRLGIPQAERA 117
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVV 181
LAG V A +DS V + +E + G+++ I EA+ E L+ + T++
Sbjct: 118 YLAG-------VGAQYDSELVYHSVQESAAQMGIVYSGIEEALHEPEWEKLIHEKFMTLI 170
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P D+ +AAL+ AV++ GSFVY+PKG R L +YFR+N KG GQFE TLII ++ + +
Sbjct: 171 PPTDHKFAALHGAVWSGGSFVYVPKGTRLDFPLQSYFRLNAKGAGQFEHTLIIVEDDADL 230
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+AP+ + LHA VEL A ++YST++NW +YN TKR C
Sbjct: 231 HFIEGCSAPKYNVANLHAGAVELFIGKGAHLRYSTIENW-------SKNMYNLNTKRARC 283
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ W GS + + YP +L G +S F I + Q +D+G K++ A
Sbjct: 284 -DEGGSVEWISGSFGSHVGYLYPMSILAGRKSRCTFTGITFAGQGQNLDTGCKVVLAAPE 342
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T++ I +K IS G +T+R V A S C SL++ + + TIP ++ +
Sbjct: 343 TSAAIETKSISKGGGVSTFRSSVVATPNATDSAASVSCQSLMLDDVSRSDTIPAMDVRCK 402
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEAT +I D+ +FY + RGI EE A +IVNGF V ++LP+E+AVE LI
Sbjct: 403 KVDIGHEATIGRIGDDTIFYLMSRGISEEEARTMIVNGFADPVSKELPLEYAVEMNNLIK 462
Query: 482 ISLEGSVG 489
+ +EG++G
Sbjct: 463 LEMEGAIG 470
>gi|291059984|gb|ADD72719.1| FeS assembly protein SufB [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 499
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 174/476 (36%), Positives = 274/476 (57%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+ + Y + + KGLN ++ IS +K EP WML+ RL + R ++ P W
Sbjct: 40 DIKRGIYDVKDAVTYTYSTGKGLNAQVVEKISRRKREPQWMLDLRLRSLRYFMKRPMPEW 99
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D ++ +Y +S DDV E+ +T+++LGIP E+ LAG
Sbjct: 100 G-ADISDLDIQEIVHYIVSDFKPIAESWDDVPEEIKKTFDRLGIPEAERRSLAG------ 152
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V + +L++ GV+++ + A+ +H D+V+ + ++ ++ +AAL+
Sbjct: 153 -VGAQYDSEVVYHNLRADLEQQGVVYLDMESAVHKHEDIVRAHFMHLIKPNEHKFAALHG 211
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+PKGV+ + L +YFR+N +GQFE TLII DEG+ + ++EGC+AP+
Sbjct: 212 AVWSGGSFVYVPKGVQVDLPLQSYFRLNANQSGQFEHTLIIVDEGASLHFIEGCSAPKYY 271
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+N LHA VEL NA ++YST++NW +YN TKR I W
Sbjct: 272 KNALHAGAVELYVKKNARLRYSTIENW-------SRNLYNLNTKRAIV-DEDGVIEWISG 323
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T YP +LRG++S EF I ++ Q +D+GTK +HL +NT S + ++ IS
Sbjct: 324 SFGSRVTMLYPMSILRGDRSRSEFTGITFASAGQYLDTGTKTVHLGRNTVSEVHARSISK 383
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG +S+ A ++ +C+SL++ N TIP I+ + + ++ HEA +
Sbjct: 384 NGGTANYRGLLSIGPKADGAKAVAECESLMLDNQSHTDTIPIIDVRTDNVDIGHEAKIGR 443
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
ISD +FY +QRG+ E+ AI+LIV GFV V ++LP+E+AVE LI I LEG++G
Sbjct: 444 ISDRVVFYLMQRGLDEQTAISLIVRGFVEPVSKELPLEYAVELNNLISIELEGAIG 499
>gi|255659877|ref|ZP_05405286.1| FeS assembly protein SufB [Mitsuokella multacida DSM 20544]
gi|260847957|gb|EEX67964.1| FeS assembly protein SufB [Mitsuokella multacida DSM 20544]
Length = 475
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 173/491 (35%), Positives = 277/491 (56%), Gaps = 18/491 (3%)
Query: 1 MVAVRET-VDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + T K D+++ Y + + V K GL E+IIR IS +K++P WML++R
Sbjct: 1 MAEEKFTPKKKTYVEDIERTLYDIKDADHSVYKTQSGLTEEIIRDISKRKHDPQWMLDFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L + + ++ P+W ++ DD+ Y P + + +V ++ T+++LGIP
Sbjct: 61 LKSLEVYNSLALPTWGP-DISELNMDDIVTYVQPDAKMTGN-WQEVPTDIKNTFDRLGIP 118
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
EQ+ S V A +DS V + +E+L K GVI+ + AI EH D+VK+Y
Sbjct: 119 EAEQKQ------SLAGVGAQYDSEVVYHSIQEDLVKQGVIYTDMETAIREHEDVVKEYFM 172
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
T+VP D+ +AAL+ AV++ GSFVY+P+GV + L +YFR+N G GQFE TLII ++
Sbjct: 173 TLVPPKDHKFAALHGAVWSGGSFVYVPEGVHVEIPLQSYFRLNAAGAGQFEHTLIIVEKN 232
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + ++EGC+AP+ + LHA VEL + A ++YST++NW + N TKR
Sbjct: 233 ASLHFIEGCSAPKYNVTNLHAGCVELFVKEGARLRYSTIENW-------SRNMMNLNTKR 285
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
I W GS ++ YP +L GE + EF + ++ Q +D+G ++H
Sbjct: 286 ALV-EKDGIIEWVSGSFGSHVSCLYPCSILHGENARCEFTGVTFASKGQNLDTGASVIHA 344
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +T++ I ++ IS TYR V V R A ++ C+SL++ N + T+P ++
Sbjct: 345 APHTSANINTRTISKAGGKATYRSAVKVTRRAPFAKCSVNCESLMLDNESRSDTLPVMDI 404
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ ++ HEA +ISDE +FY RGI E+ A A+IV GFV + ++LP+E+AVE
Sbjct: 405 EGDEADIGHEAKIGRISDEAIFYLTSRGIDEDEARAMIVRGFVEPIAKELPLEYAVEMNN 464
Query: 479 LIDISLEGSVG 489
L++I LEG++G
Sbjct: 465 LVNIELEGTMG 475
>gi|227508615|ref|ZP_03938664.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227523802|ref|ZP_03953851.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus hilgardii ATCC 8290]
gi|227089037|gb|EEI24349.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus hilgardii ATCC 8290]
gi|227191947|gb|EEI72014.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 467
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 189/490 (38%), Positives = 281/490 (57%), Gaps = 24/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V E +D Y++GF N++ V GL ED +R IS K+EP WML++RL
Sbjct: 1 MTDVSEV------LDDKDYEFGFHDNVKPVYSTGLGLTEDTVREISKAKDEPKWMLDYRL 54
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY +L M +P + +D + + ++ + DDV ++ T+++LG+P
Sbjct: 55 KAYHAYLKMSEPGFGP-DLTGLDLEHMKFFQRATDKQ-YRDWDDVPQDIKTTFDRLGVPQ 112
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG A ++S V +E+ K G+IF A+ ++PDL KK+
Sbjct: 113 AERKYLAGSS-------AQYESEVVYHKMEEQFDKLGIIFTDTDTALKKYPDLFKKWFGK 165
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+V +N YAALNSAV++ G+F+Y+PKGV + +YFRIN + +GQFERTLII DEG+
Sbjct: 166 LVKPTNNKYAALNSAVWSGGTFIYVPKGVTVTTPIQSYFRINAEKSGQFERTLIIVDEGA 225
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
++ Y+EGCTAP + LHAAVVE+ L NA +Y+T+QNW +Y+ TKR
Sbjct: 226 HLEYVEGCTAPTYKSDSLHAAVVEVNVLPNAYCRYTTIQNW-------SNNVYSLETKRA 278
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS IT KYPS L GE + G SIA++ D+G +M+H A
Sbjct: 279 QAL-DNAIMEWVDGNLGSKITMKYPSVYLNGEGARGTMLSIAVAGKNIDSDTGAQMIHNA 337
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S ++SK IS YRGK+ R + S +CD++++ + + TIPY E
Sbjct: 338 PNTSSSVISKSISKDGGAVDYRGKIKFGRHSDGSFAHVECDTIIMDDQSTSDTIPYNEIL 397
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + ++EHEA SKIS+E L+Y + RGI E+ A +I+ FV ++LPME+AVE +L
Sbjct: 398 NDNVSMEHEAKVSKISEEQLYYLMSRGISEQKATEMIIMSFVEPFTKELPMEYAVELNRL 457
Query: 480 IDISLEGSVG 489
I +EGS+G
Sbjct: 458 ISFEMEGSIG 467
>gi|227511594|ref|ZP_03941643.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus buchneri ATCC 11577]
gi|227085239|gb|EEI20551.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus buchneri ATCC 11577]
Length = 467
Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 189/490 (38%), Positives = 281/490 (57%), Gaps = 24/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V E +D Y++GF N++ V GL ED +R IS K+EP WML++RL
Sbjct: 1 MTDVSEV------LDDKDYEFGFHDNVKPVYSTGLGLTEDTVREISKAKDEPKWMLDYRL 54
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AY +L M +P + +D + + ++ + DDV ++ T+++LG+P
Sbjct: 55 KAYHAYLKMSEPGFGP-DLTGLDLEHMKFFQRATDKQ-YRDWDDVPQDIKTTFDRLGLPQ 112
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E++ LAG A ++S V +E+ K G+IF A+ ++PDL KK+
Sbjct: 113 AERKYLAGSS-------AQYESEVVYHKMEEQFDKLGIIFTDTDTALKKYPDLFKKWFGK 165
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+V +N YAALNSAV++ G+F+Y+PKGV + +YFRIN + +GQFERTLII DEG+
Sbjct: 166 LVKPTNNKYAALNSAVWSGGTFIYVPKGVTVTTPIQSYFRINAEKSGQFERTLIIVDEGA 225
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
++ Y+EGCTAP + LHAAVVE+ L NA +Y+T+QNW +Y+ TKR
Sbjct: 226 HLEYVEGCTAPTYKSDSLHAAVVEVNVLPNAYCRYTTIQNW-------SNNVYSLETKRA 278
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W GS IT KYPS L GE + G SIA++ D+G +M+H A
Sbjct: 279 QAL-DNAIMEWVDGNLGSKITMKYPSVYLNGEGARGTMLSIAVAGKNIDSDTGAQMIHNA 337
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S ++SK IS YRGK+ R + S +CD++++ + + TIPY E
Sbjct: 338 PNTSSSVISKSISKDGGAVDYRGKIKFGRHSDGSFAHVECDTIIMDDQSTSDTIPYNEIL 397
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N + ++EHEA SKIS+E L+Y + RGI E+ A +I+ FV ++LPME+AVE +L
Sbjct: 398 NDNVSMEHEAKVSKISEEQLYYLMSRGISEQKATEMIIMSFVEPFTKELPMEYAVELNRL 457
Query: 480 IDISLEGSVG 489
I +EGS+G
Sbjct: 458 ISFEMEGSIG 467
>gi|295698362|ref|YP_003603017.1| FeS assembly protein SufB [Candidatus Riesia pediculicola USDA]
gi|291157143|gb|ADD79588.1| FeS assembly protein SufB [Candidatus Riesia pediculicola USDA]
Length = 497
Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 252/492 (51%), Positives = 345/492 (70%), Gaps = 27/492 (5%)
Query: 13 KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
I ++Y+ GF T + DK G+NE II IS K+ EPDWML +RL +Y++WL MK+P
Sbjct: 11 SISEEKYRLGFSTPVLSDKTNLGINEKIIYQISKKRKEPDWMLNFRLESYKKWLKMKEPH 70
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGP-------------------QSLDDVDPELLRTYE 113
W YP I++ +YY++P + + ++ E+ +T+E
Sbjct: 71 WLNGYYPKINYQKYFYYSSPIQKRDNPNSGILKKSFKNQNTLRDNKKYNLLNQEIQKTFE 130
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
K GI +++ +A VDAVFDSVSV TT +++L+ G+IF ++AI ++P+LV
Sbjct: 131 KFGISFKKKSTIA--------VDAVFDSVSVFTTHRKDLEDLGIIFCSFNQAIRKYPELV 182
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
KKYL +VVP DNF+A+LNSAV +DG+FVY+PK +CP+ELSTYFRINEK TGQFERT++
Sbjct: 183 KKYLGSVVPNDDNFFASLNSAVASDGTFVYVPKYTKCPIELSTYFRINEKNTGQFERTIL 242
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+AD+GS +SYLEGC+AP R QLHAAVVE++ ++A++KYST+QNW+PG K GI N
Sbjct: 243 VADKGSELSYLEGCSAPIRKNYQLHAAVVEVIVHEDAKVKYSTIQNWFPGKIGEKNGILN 302
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKR C+G S +SW Q E GSAITWKYPS +L+G+ S GEFYSI+++NG QQ D+GT
Sbjct: 303 FVTKRALCKGKNSNMSWIQSEIGSAITWKYPSVILKGDNSVGEFYSISLTNGDQQADTGT 362
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ KNT+S I+SKGI+ G S N+YRG V + + SRN+TQCDSLL+G +H
Sbjct: 363 KMIHIGKNTSSTIISKGIACGKSINSYRGLVKILEKSDFSRNYTQCDSLLVGKKSSSHAF 422
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P I KN + LEHEATTSKIS+E +FYC QRGI +E A+++IVNGF R+V + P+EF+
Sbjct: 423 PLITVKNRTAQLEHEATTSKISEEQIFYCSQRGINQENAVSMIVNGFCRDVFFRFPLEFS 482
Query: 474 VEAQKLIDISLE 485
EAQ+L+ +LE
Sbjct: 483 AEAQELLKTNLE 494
>gi|257065355|ref|YP_003145027.1| Iron-regulated ABC transporter membrane component SufB [Slackia
heliotrinireducens DSM 20476]
gi|256793008|gb|ACV23678.1| Iron-regulated ABC transporter membrane component SufB [Slackia
heliotrinireducens DSM 20476]
Length = 469
Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 170/484 (35%), Positives = 263/484 (54%), Gaps = 19/484 (3%)
Query: 8 VDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+ D+D+ Y F + ++ +GL DI+R IS +KNEP WMLE RL + +
Sbjct: 3 KKRTEVADIDRSMYDFRYGEEGFERVAEGLTPDIVREISERKNEPQWMLEHRLKSLEIYN 62
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
M W +D D + Y P + D V ++ T+E+LGIP E+ LA
Sbjct: 63 QMPVSDWGPA-IDGLDMDHIVTYVKPNTDQRAD-WDSVPDDIKNTFERLGIPEAERTYLA 120
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVGD 185
G V A +DS V + ++ + G+++ I EA+ + DL+K+ T++P D
Sbjct: 121 G-------VGAQYDSELVYHSMQDAASQMGIVYSGIEEALDGPYADLIKEKFMTLIPPTD 173
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ +AAL+ AV++ GSFVY+PKGV+ L +YFR+N G GQFE TLII ++ + + ++E
Sbjct: 174 HKFAALHGAVWSGGSFVYVPKGVKLDYPLQSYFRLNASGAGQFEHTLIIVEDDADLHFIE 233
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP+ + LHA VEL NA ++YST++NW +YN TKR C
Sbjct: 234 GCSAPKYNVANLHAGAVELFIGKNAHLRYSTIENW-------SKNMYNLNTKRSIC-DEG 285
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
I W GS + + YP +L G +S F I + Q +D+G K++ A +T++
Sbjct: 286 GSIEWISGSFGSHVGYLYPMSILAGARSTSTFTGITFAGAGQNLDTGCKVVMAAPDTSAA 345
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ +K IS +T+R V A S C SL++ + + TIP ++ + ++
Sbjct: 346 VETKSISKDGGVSTFRSSVVATENAHGSAATVSCQSLMLDDISRSDTIPAMDIRCKDIDV 405
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEAT +I DE +FY + RGIPEE A +IVNGF V ++LP+E+AVE LI + +E
Sbjct: 406 GHEATIGRIGDETIFYLMSRGIPEEEARTMIVNGFADPVSKELPLEYAVEMNNLIKLEME 465
Query: 486 GSVG 489
G++G
Sbjct: 466 GAIG 469
>gi|257458415|ref|ZP_05623557.1| FeS assembly protein SufB [Treponema vincentii ATCC 35580]
gi|257444219|gb|EEV19320.1| FeS assembly protein SufB [Treponema vincentii ATCC 35580]
Length = 482
Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 170/476 (35%), Positives = 274/476 (57%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+++ Y + +I GLNE+++R ISA+K EP WML+ RL + + + P W
Sbjct: 23 DIERGIYDIKDSIDYSYSTGMGLNEEVVRKISARKLEPKWMLDLRLQSLQYFFERPMPDW 82
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++ ++ +Y D V E+ +T+++LGIP EQ LAG
Sbjct: 83 G-ADISDLNIQEIIHYIVSDEKPLATDWDQVPEEIKQTFDRLGIPKAEQTSLAG------ 135
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V + ++ L GV+++ + A+ ++ D+V+++ ++ D+ +AAL+
Sbjct: 136 -VGAQYDSEVVYHSLQKNLADQGVVYLDMETAVLQYGDIVREHFMQLIKPNDHKFAALHG 194
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+PKGV+ + L +YFR+N +GQFE TLII DEG+Y+ ++EGC+AP+
Sbjct: 195 AVWSGGSFVYVPKGVKVELPLQSYFRLNANQSGQFEHTLIIVDEGAYLHFIEGCSAPKYY 254
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+N LHA VEL A ++YST++NW +YN TKR + I W
Sbjct: 255 KNALHAGAVELYVGKKATMRYSTIENW-------SRNLYNLNTKRAIVEEDGA-IEWVSG 306
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T YP +L+G++S EF + ++ Q +D+GTK +H+ KNT S + S+ I+
Sbjct: 307 SFGSRVTMLYPMSILKGDRSRSEFTGVTFASAGQCLDTGTKTVHIGKNTVSEMHSRSIAK 366
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+ YRG + + + A ++ +C+SL++ N TIP IES ++ HEA +
Sbjct: 367 NGGESNYRGLLVIGKDATGAKALAECESLMLDNESRTDTIPIIESHTDDADIGHEAKIGR 426
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
ISD +FY +QRG+ E A +LI+ GFV + ++LP+E+AVE LI I LEG++G
Sbjct: 427 ISDSMVFYLMQRGLDEATAKSLIIKGFVEPISKELPLEYAVELNNLISIELEGTIG 482
>gi|42526182|ref|NP_971280.1| FeS assembly protein SufB [Treponema denticola ATCC 35405]
gi|41816294|gb|AAS11161.1| FeS assembly protein SufB [Treponema denticola ATCC 35405]
gi|325473517|gb|EGC76710.1| FeS assembly protein SufB [Treponema denticola F0402]
Length = 488
Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 175/476 (36%), Positives = 282/476 (59%), Gaps = 17/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+++ Y + +I GLNE++++ ISA+K EPDWML+ RL + + P W
Sbjct: 29 DIERGVYDIKDSIDYKYSTGLGLNEEVVKKISARKKEPDWMLDLRLKSLAYFNERPMPDW 88
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D ++ +Y + ++ DDV E+ +T+++LGIP E+ LAG
Sbjct: 89 G-ADISDLDIQEIIHYIVSDTKPLAETWDDVPEEIKKTFDRLGIPEAERSSLAG------ 141
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V + KE+L+K GV+++ + A+ ++ D+VKK+ ++ D+ +AAL+
Sbjct: 142 -VGAQYDSEVVYHSLKEDLEKQGVVYLDMETAVHKYEDIVKKHFMQLIKPNDHKFAALHG 200
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+PKGVR + L +YFR+N + +GQFE TLII +EG+Y+ ++EGC+AP+
Sbjct: 201 AVWSGGSFVYVPKGVRVELPLQSYFRLNAQQSGQFEHTLIIVEEGAYLHFIEGCSAPKYY 260
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+N LHA VEL A ++YST++NW +YN TKR + I W
Sbjct: 261 KNALHAGAVELYVGKKATLRYSTIENW-------SRNLYNLNTKRAIVEEDGA-IEWVSG 312
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T YP +L+G++S EF + ++ Q +D+GTK +H+ KNT S + S+ I+
Sbjct: 313 SFGSRVTMLYPMSILKGDRSRSEFTGVTFASEGQCLDTGTKTVHIGKNTVSEMRSRSIAK 372
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG + + A ++ +C+SL++ + + TIP IES ++ HEA +
Sbjct: 373 NGGEANYRGLLYIGANATGAKAAAECESLMLDDKSRSDTIPIIESHIDDVDIGHEAKIGR 432
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IS+ +FY +QRG+ E AA +LI+ GFV + ++LP+E+AVE LI I LEG++G
Sbjct: 433 ISESMVFYLMQRGLDEAAAKSLIIKGFVEPISKELPLEYAVELNNLITIELEGTIG 488
>gi|325956933|ref|YP_004292345.1| hypothetical protein LAC30SC_06400 [Lactobacillus acidophilus 30SC]
gi|325333498|gb|ADZ07406.1| hypothetical protein LAC30SC_06400 [Lactobacillus acidophilus 30SC]
Length = 467
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 191/487 (39%), Positives = 288/487 (59%), Gaps = 21/487 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + D V+ ++Y+YGF +IQ + +GL E+++R ISA+K+EP WML++RL AY
Sbjct: 1 MTKAEDIVKD---EEYQYGFHDDIQPEFSTGRGLTEEVVRRISAEKHEPKWMLDYRLKAY 57
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + M P + D Y + + DDV E+ T+E+LG+P E+
Sbjct: 58 QIYKKMPMPDFGPDLSDL--DLDDMLYYQKYTKKKYRDWDDVPDEIKETFERLGVPEAER 115
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A ++S V KE+ K G++F A+ ++P+L KKY +V
Sbjct: 116 KYLAGS-------GAQYESEMVYHNMKEQFDKMGIVFTDTDTALKKYPELFKKYFGKLVK 168
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN +AALN AV++ GSF+Y+PKGV+ P + YFR+N + +GQFERTLII DEG+ +
Sbjct: 169 PTDNKFAALNCAVWSGGSFIYVPKGVKVPTPIQAYFRLNAENSGQFERTLIIVDEGASLD 228
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAPQ + LHAA VE+ L +A +Y+T+QNW +Y+ TK+
Sbjct: 229 YVEGCTAPQYLSDSLHAAGVEVNVLKDAYCRYTTIQNW-------SDNVYSLETKKAAA- 280
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ + W G+ +T KYPS L GE + G SIA+++ DSG++MLH A NT
Sbjct: 281 ASHATMEWVDGNLGAKVTMKYPSVYLNGEGARGTMLSIAVAHKGIHQDSGSRMLHNAPNT 340
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S IVSK I+ G + YRG V + ++ S++ +CD++++ + + TIP +NS+
Sbjct: 341 SSSIVSKSIAKGGGSTDYRGSVKFGKNSSGSKSHVECDTIIMDDKSSSDTIPTNSIENSN 400
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+EHEAT SKISDE L+Y RGIPE A +I+ GFV ++LPME+AVE +LI
Sbjct: 401 VAMEHEATVSKISDEELYYLESRGIPERKATEMIIMGFVEPFTKQLPMEYAVELNRLISF 460
Query: 483 SLEGSVG 489
+EG++G
Sbjct: 461 QMEGAIG 467
>gi|51572325|gb|AAU06858.1| plastid SufB [Helicosporidium sp. ex Simulium jonesi]
Length = 412
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 270/417 (64%), Positives = 331/417 (79%), Gaps = 6/417 (1%)
Query: 28 QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY 87
+ PKGL+ED++R ISAKK EP+WML++RL AYRRWLTM++P W+ +RYP ID+
Sbjct: 2 ESVSIPKGLSEDVVRAISAKKEEPEWMLDFRLKAYRRWLTMEEPCWSDVRYPPIDYQSYT 61
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
YY+APK I SLD+VDP LL T++KLGIP+ EQ+ LA VAVDAVFDSVS+ TT
Sbjct: 62 YYSAPKHIPKKASLDEVDPALLATFDKLGIPLVEQKRLA-----NVAVDAVFDSVSIATT 116
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
F+EEL K+GV+F ISEA+ + P+LV++YL +VVP GDN++AALNSAVF+DGSFVY+P G
Sbjct: 117 FREELAKAGVLFCSISEAVRDCPELVRRYLGSVVPPGDNYFAALNSAVFSDGSFVYVPAG 176
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
V CPMELSTYFRIN +GQFERTLI+ +EG+ VSYLEGCTAP D NQLHAAVVEL A
Sbjct: 177 VTCPMELSTYFRINTANSGQFERTLIVVEEGASVSYLEGCTAPAFDTNQLHAAVVELTAA 236
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
+A IKYSTVQNWY GD QG+GGIYNFVTKRG G R+KISWTQ+ETGSAITWKYPS +
Sbjct: 237 SDATIKYSTVQNWYAGDEQGRGGIYNFVTKRGLA-GDRAKISWTQVETGSAITWKYPSVV 295
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L+GE S GEFYS+A++NG QQ D+GTKM+HL +N+ SRIVSKGI AG S N YRG VSV
Sbjct: 296 LKGEASVGEFYSVALTNGQQQADTGTKMVHLGRNSRSRIVSKGICAGTSTNAYRGLVSVT 355
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
A ++R+ +QCDS+LIG+ AHT PYI +N+S +EHEA+TSKI ++ LFY Q
Sbjct: 356 PAARNARSHSQCDSMLIGDRAHAHTYPYIAVRNASATVEHEASTSKIGEDQLFYFQQ 412
>gi|48478184|ref|YP_023890.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
gi|48430832|gb|AAT43697.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
Length = 480
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 198/497 (39%), Positives = 288/497 (57%), Gaps = 25/497 (5%)
Query: 1 MVAVRETVDKVRKID-----VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWM 54
MV + + ++ D+ Y F NI+ V +GL + IS K EPDWM
Sbjct: 1 MVEEYSKDELIERLTEELKNNDKSAYEFRDNIKPVYSTGRGLTRKTVEEISEIKKEPDWM 60
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
RL A +L+ P+W IDFD++ YY P I +S D+V ++ +T++K
Sbjct: 61 RRARLKALEIFLSKPMPTWGP-DLSGIDFDNITYYTRPDEIKA-RSWDEVPDQIKQTFQK 118
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
LGIP EQ+ LAG A +DS V + + E ++ GVIF + A+ ++PDLVK
Sbjct: 119 LGIPEMEQKYLAGSV-------AQYDSEGVYSNLRREWEEKGVIFTDLDTAVQKYPDLVK 171
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+Y +P DN +AALN AV++ GSF+Y+PKGV+ M L TYFR+N + +GQFE T++I
Sbjct: 172 EYYCRAIPPSDNKFAALNGAVWSGGSFLYVPKGVKIDMPLQTYFRLNGEQSGQFEHTIVI 231
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
ADEG+ V Y+EGCTAP+ + N LH A+VE+ A N+E+KY++VQNW +YN
Sbjct: 232 ADEGAKVHYIEGCTAPKYETNSLHTAIVEIYAHKNSEVKYTSVQNW-------SDSVYNL 284
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
KR +K+ W E GS +T YPS LRG+ + I ++ D+G K
Sbjct: 285 PVKRAWV-DENAKMEWITGELGSKVTMIYPSSYLRGKNASTSNLQITLATHNTVKDAGGK 343
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
LHLA NTTS+IVSK IS YRG V ++ GA +S++F QCD+LLI + +T P
Sbjct: 344 ALHLAPNTTSKIVSKSISLDDGLTVYRGLVRINDGARNSKSFVQCDALLINDESKNYTYP 403
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
Y E + + HEAT +I + L Y RG+ E+ A ++IV GF+ +V++++PMEFAV
Sbjct: 404 YDEIYDPTAVFSHEATVGRIGTDELTYLRSRGLSEDEASSMIVLGFMDDVMKEIPMEFAV 463
Query: 475 EAQKLIDISLE--GSVG 489
E +L+ + + G+VG
Sbjct: 464 EMNRLVKLEMSKMGAVG 480
>gi|320528857|ref|ZP_08029949.1| FeS assembly protein SufB [Selenomonas artemidis F0399]
gi|320138487|gb|EFW30377.1| FeS assembly protein SufB [Selenomonas artemidis F0399]
Length = 472
Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats.
Identities = 165/476 (34%), Positives = 272/476 (57%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+++ Y + KA GL E+IIR IS +K++P+WMLE+RL + + M+ P W
Sbjct: 14 DIERTIYDITNEDRSVYKAASGLTEEIIRDISVRKHDPEWMLEFRLKSLDTYHAMELPPW 73
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D + Y P + + ++V ++ T+++LGIP E+ LAG
Sbjct: 74 GP-DLSDLDMDHIVTYVQPDAKMVGD-WNEVPEDIKETFDRLGIPEAEKTSLAG------ 125
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V + +E L K GV++ + A+ E+ D+V++Y T+VP + +AAL+
Sbjct: 126 -VGAQYDSEVVYHSIQESLVKQGVVYTDMETALQEYGDVVRQYFMTLVPPKAHKFAALHG 184
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+P+G++ + L +YFR+N G GQFE TLII ++G+ + ++EGC+AP+ +
Sbjct: 185 AVWSGGSFVYVPEGIKVDIPLQSYFRLNAAGAGQFEHTLIIVEKGASLHFIEGCSAPKYN 244
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LHA VEL + A ++YST++NW + N TKR + + W
Sbjct: 245 VTNLHAGCVELFVKEGARLRYSTIENW-------SRNMMNLNTKRVKVEKDGA-VEWVSG 296
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS ++ YP+ +L GE + EF I ++ Q++D+G ++ A +T++ I ++ IS
Sbjct: 297 SFGSHVSMLYPTSILSGENASCEFTGITFASKGQELDTGATVIFDAPHTSANISTRSISK 356
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YR V V A ++ C+SL++ + + T+P ++ ++ HEA +
Sbjct: 357 SGGIAVYRSAVKVTPRAVGAKCSVDCESLMLDSESRSDTLPVMDIACDQVDIGHEAKIGR 416
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
ISDE +FY RGI EE A A+IV GFV + ++LP+E+AVE L++I LEG++G
Sbjct: 417 ISDEAIFYLTSRGIDEEEARAMIVRGFVEPIAKELPLEYAVEMNNLVNIELEGTMG 472
>gi|116619106|ref|YP_819477.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116097953|gb|ABJ63104.1| Iron-regulated ABC transporter membrane component SufB [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 476
Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats.
Identities = 196/488 (40%), Positives = 288/488 (59%), Gaps = 20/488 (4%)
Query: 5 RETVDKVRKIDVDQ--YKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+E +++ + + + GF+ + Q V KGLNEDIIR ISAKKNEP WML++RL A
Sbjct: 6 QEAINQTKAAISNDKASELGFQDDYQAVFSTGKGLNEDIIRQISAKKNEPQWMLDYRLQA 65
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y+ +L M +W I F+D+YYY P + + DDV EL T+E+LG+P E
Sbjct: 66 YQTYLRMPMHTWGP-DLSEIHFEDIYYYNKP-TNDKYRDWDDVPAELKETFERLGVPEAE 123
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ LAG A ++S V KEE K+G+IF A+ E+P+L+++Y ++V
Sbjct: 124 RKWLAGSS-------AQYESEVVYHRMKEEFAKTGIIFTDTDTAVQEYPELIQEYFGSLV 176
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
+N AALNSAV++ G+F+Y+PK V + +YFRIN + GQFERTLII DEG++V
Sbjct: 177 KPTNNKLAALNSAVWSGGTFIYVPKDVHVTTPIQSYFRINTENEGQFERTLIIVDEGAHV 236
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGC+AP + LHAAVVE++ + +Y+T+QNW +Y+ TKR
Sbjct: 237 DYVEGCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNW-------SNNVYSLETKRAAA 289
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS T KYPS L GE + G SIA++ +DSG +M+H AKN
Sbjct: 290 H-ENATMEWVDGNFGSKTTMKYPSVYLEGEGAKGTMLSIAVAGEGVNLDSGAQMIHNAKN 348
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S I+SK I+ + YRG V R + S +CD++L+ + A TIPY N
Sbjct: 349 TSSSIISKSIAHDGGSTDYRGTVKFGRESDGSFAHVECDTILVDDKSSADTIPYNTILNG 408
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ ++EHEA S++S+E L+Y + RGI E A +I+ GF+ ++LPME+AVE +L+
Sbjct: 409 NVSMEHEAKVSRVSEEQLYYLMTRGISAEKATEMIIMGFIEPFTKELPMEYAVELNRLMK 468
Query: 482 ISLEGSVG 489
+ GSVG
Sbjct: 469 FEMVGSVG 476
>gi|169350358|ref|ZP_02867296.1| hypothetical protein CLOSPI_01125 [Clostridium spiroforme DSM 1552]
gi|169293141|gb|EDS75274.1| hypothetical protein CLOSPI_01125 [Clostridium spiroforme DSM 1552]
Length = 468
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 191/483 (39%), Positives = 289/483 (59%), Gaps = 24/483 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M +++ + +Y YGF ++ V K PKG+NE+I+ IS KNEP+WMLE+RL
Sbjct: 1 MAKIKD------DLFDHEYAYGFNDGDVSVYKTPKGINEEIVTEISKIKNEPEWMLEYRL 54
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
AYR ++ P+W + IDFD+ YY P + ++V + T+ KLGIP
Sbjct: 55 KAYRCFMEKPMPTWG-VDLSRIDFDEYTYYIRPSDKQTNK-WEEVPETIKETFNKLGIPE 112
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
EQ+ L+GV T ++S V +E+ + GVIF+ I + E+P++ K+Y T
Sbjct: 113 AEQKYLSGVST-------QYESEVVYHNMLKEVNEKGVIFLDIDSGLREYPEIFKEYFDT 165
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P DN ++ALN AV++ GSF+Y+P GV+ L +YFRIN + QFERTLII D+G+
Sbjct: 166 VIPYNDNKFSALNGAVWSGGSFIYVPPGVKLEKPLQSYFRINSEQMAQFERTLIIVDKGA 225
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ Y+EGCTAP ++ LHA VVE+V + A+ +Y+T+QNW I N VT+R
Sbjct: 226 EIHYVEGCTAPNYSKDSLHAGVVEIVVKEGAKCRYTTIQNW-------SDNILNLVTQRA 278
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ W GSA+T KYP+C+L E + G +IA++ Q +DSG+KM+HLA
Sbjct: 279 KVF-KNGSMEWVDGNIGSAVTMKYPTCMLMEEGAKGSCITIAVARENQIMDSGSKMIHLA 337
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT+S IVSK +S YRG V + A ++++ +CD+L++ + + T+P
Sbjct: 338 PNTSSSIVSKSVSRRGGKVNYRGMVQHGKNAINAKSKVECDTLILDDISTSDTVPTNWMM 397
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
N+ +EHEAT SK+SDE LFY + RG+ ++ A+ +IV GF+ ++LPME+AVE +L
Sbjct: 398 NNESIIEHEATVSKVSDEQLFYLMSRGLTKKEAMEMIVMGFIEPFARELPMEYAVELNQL 457
Query: 480 IDI 482
I +
Sbjct: 458 IKL 460
>gi|260886224|ref|ZP_05897487.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
gi|330839782|ref|YP_004414362.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
gi|260863943|gb|EEX78443.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
gi|329747546|gb|AEC00903.1| FeS assembly protein SufB [Selenomonas sputigena ATCC 35185]
Length = 468
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 173/490 (35%), Positives = 280/490 (57%), Gaps = 23/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M + V+ D+++ Y + ++ V KA +GL EDIIR I+ +K++PDWMLE+RL
Sbjct: 1 MAKKKTFVE-----DIERTLYDIKNHDVPVYKAQQGLTEDIIRDIAKQKHDPDWMLEFRL 55
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M PSW +D +++ Y P + + +V ++ T+++LGIP
Sbjct: 56 KSLETYNKMALPSWGP-DLSELDMNEIVTYVRPDAKMTGN-WKEVPEDIKDTFDRLGIPE 113
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+ LAG V A +DS V + ++ L K GV++ + A+ EH DLVKKY
Sbjct: 114 AEKTSLAG-------VGAQYDSEVVYHSIQDSLVKQGVVYTDMETALVEHEDLVKKYFMK 166
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VP D+ +AAL+ AV++ GSFVY+P+GV + L +YFR+N G GQFE TLII ++G+
Sbjct: 167 LVPPKDHKFAALHGAVWSGGSFVYVPEGVDVEIPLQSYFRLNAPGAGQFEHTLIIVEKGA 226
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ ++EGC+AP+ + LHA VEL + A ++YST++NW + N TKR
Sbjct: 227 NLHFIEGCSAPKYNVTNLHAGCVELFVKEGARLRYSTIENW-------SRNMMNLNTKRA 279
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
I W GS ++ YP +L GE++ EF + ++ Q +D+G ++H A
Sbjct: 280 LV-EKDGLIEWVSGSFGSHVSMLYPCSILHGERARCEFTGVTFASKGQTLDTGATVIHTA 338
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T++ I ++ IS YR V V + A ++ C+SL++ + + T+P ++ +
Sbjct: 339 PHTSATINTRSISKAGGKAIYRSAVKVAKNAPFTKCSVNCESLMLDSISRSDTLPAMDIE 398
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA +ISDE ++Y RGI EE A A+IV GFV + ++LP+E+AVE L
Sbjct: 399 GDEADIGHEAKIGRISDEAVYYLTSRGIDEEEARAMIVRGFVEPIAKELPLEYAVEMNNL 458
Query: 480 IDISLEGSVG 489
++I LEG++G
Sbjct: 459 VNIELEGTMG 468
>gi|320537860|ref|ZP_08037775.1| FeS assembly protein SufB [Treponema phagedenis F0421]
gi|320145279|gb|EFW36980.1| FeS assembly protein SufB [Treponema phagedenis F0421]
Length = 493
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 172/485 (35%), Positives = 282/485 (58%), Gaps = 17/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+T K D+D+ Y + I GLN D+++ IS +KNEP WML+ RL + +
Sbjct: 25 QTRKKTYVSDIDRGIYDIKDTIDYAFSTGFGLNADVVKKISERKNEPKWMLDLRLQSLQY 84
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
++ P+W ++ +++ +Y S + DDV ++ +T+++LGIP E+
Sbjct: 85 FIDTPVPNWGP-DISDLNIEEIIHYIVSDSKPMADNWDDVPEDIKKTFDRLGIPEAERTS 143
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG V A +DS V + K++L+ GV+++ + A+ E+ +VK++ ++
Sbjct: 144 LAG-------VGAQYDSEVVYHSLKKDLENQGVVYLDMDTAVHEYEAIVKEHFMQLIKPN 196
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +A+L+ AV++ GSFVY+PKGV+ + L +YFR+N K +GQFE TLII DEG+Y+ ++
Sbjct: 197 DHKFASLHGAVWSGGSFVYVPKGVKVDLPLQSYFRLNAKQSGQFEHTLIIVDEGAYLHFI 256
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ +N LHA VEL A ++YST++NW +YN TKR
Sbjct: 257 EGCSAPKYYKNALHAGAVELYVKKGATLRYSTIENW-------SRNLYNLNTKRALVEED 309
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W GS +T YP +L+G+++ EF + ++ Q +D+GTK +HL KNT S
Sbjct: 310 GA-VEWVSGSFGSRVTMLYPMSILKGDRARSEFTGVTFASAGQCLDTGTKTVHLGKNTVS 368
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ S+ IS YRG + + A ++ +C+SL++ N TIP+I+ + +
Sbjct: 369 EMHSRSISKNGGEANYRGLLYIGPNADGAKAVAECESLMLDNESRTDTIPFIDVHTDNVD 428
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA +ISD +FY +QRG+ E A +LI+ GFV + ++LP+E+AVE LI I L
Sbjct: 429 IGHEAKIGRISDTMVFYLMQRGLDEATAKSLIIKGFVEPISKELPLEYAVELNNLITIEL 488
Query: 485 EGSVG 489
EG++G
Sbjct: 489 EGTIG 493
>gi|323141530|ref|ZP_08076416.1| FeS assembly protein SufB [Phascolarctobacterium sp. YIT 12067]
gi|322413989|gb|EFY04822.1| FeS assembly protein SufB [Phascolarctobacterium sp. YIT 12067]
Length = 468
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 169/485 (34%), Positives = 276/485 (56%), Gaps = 19/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
E V ID Y + + + +GL +I+ IS +K++P+WMLE+RL + +
Sbjct: 2 EEKTYVDDIDRSLYDFR-NEDKDAYRIQEGLTREIVEKISREKHDPEWMLEFRLKSLDIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
++ P+W ++ D++ Y P + + + +DV ++ T+++LGIP EQ L
Sbjct: 61 NKLQVPNWGP-SIDGLNMDNIVTYVRPNTNMQGK-WEDVPEDIKDTFDRLGIPQAEQSSL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVG 184
AG V A +DS V ++E+++ GVI+ + A+ + ++V ++ +VP
Sbjct: 119 AG-------VGAQYDSEVVYHNVRKEVEEQGVIYTDMESALNGPYAEMVHEHFMKLVPPT 171
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N KG GQFE TLII DEG+ + ++
Sbjct: 172 DHKFAALHGAVWSGGSFVYVPKGVSVAIPLQSYFRLNAKGAGQFEHTLIIVDEGADLHFI 231
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL NA+++YST++NW +YN TKR
Sbjct: 232 EGCSAPKYNVANLHAGCVELFIGKNAKLRYSTIENW-------SKNMYNLNTKRALV-EE 283
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS +++ YP +L G + EF + + Q +D+G K++H A TTS
Sbjct: 284 GGTIEWVSGSFGSHVSYLYPMSILNGTGAHSEFTGVTFAGHSQNLDTGCKVVHNAPKTTS 343
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ ++ IS +T+R V V A +++ C SL++ N + TIP I+ + + +
Sbjct: 344 IVNTRSISKSGGISTFRSSVVVTNKAKQAKSSVSCQSLMLDNISRSDTIPAIDVRTADAD 403
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA +ISD+ +FY + RGI EE A A+IV+GF V ++LP+E+AVE LI + +
Sbjct: 404 IGHEAKIGRISDDAVFYLMSRGISEEEARAMIVSGFADNVSKELPLEYAVEMNNLIRLEM 463
Query: 485 EGSVG 489
+GS+G
Sbjct: 464 QGSIG 468
>gi|313888144|ref|ZP_07821818.1| FeS assembly protein SufB [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845834|gb|EFR33221.1| FeS assembly protein SufB [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 471
Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 178/487 (36%), Positives = 274/487 (56%), Gaps = 25/487 (5%)
Query: 7 TVDKVRKIDVDQY----KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
V +D Y K+ F + + KGL E+I+R ISA+K+EP+WMLE RL A
Sbjct: 6 EKTYVEDMDRGVYDIKNKFTFRSKTE-----KGLTEEIVRQISAEKDEPEWMLESRLKAL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + ++P W +D D + Y P + + +V E+ T++KLGIP E+
Sbjct: 61 KIFNEKENPKWGP-DLSEVDMDKITTYIRPDADM-SDDWKNVPDEIRDTFDKLGIPEAEK 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
E + V A +DS V + ++ L GVI+ + E+P++VKKY S +
Sbjct: 119 E------SMLSGVGAQYDSEVVYHSIQKYLSDQGVIYTDFETGLKEYPEIVKKYFSKCIT 172
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ YAAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII ++G+Y
Sbjct: 173 PNLHKYAALHYAVWSGGSFVYVPKGVNVDIPLQSYFRLNAPGAGQFEHTLIIIEDGAYCH 232
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VEL + A ++YST++NW +YN TKR
Sbjct: 233 FIEGCSAPKYNVINLHAGAVELFVGEGATLRYSTIENW-------SRNMYNLNTKRAIV- 284
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
KI W GS ++ YP+ +L GE + EF I+ + Q +D+G +++H A +T
Sbjct: 285 EKDGKIEWVSGSFGSKVSMLYPASILVGENASSEFTGISFAGEGQNLDTGAQVVHAAPHT 344
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS I +K IS YRG V + A ++N T C+SL++ N + TIP I+ +N++
Sbjct: 345 TSTINTKSISKSGGIAIYRGLVEIKENAVGAKNATSCESLMLDNKSRSDTIPTIKIENNN 404
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++ HEA +ISD +FY + RGI E+ A ++V GF + ++LPME+AVE LI++
Sbjct: 405 IDIGHEAKIGRISDSVIFYLMSRGISEQEAKEMVVRGFAEPIAKELPMEYAVEMNNLINL 464
Query: 483 SLEGSVG 489
L G++G
Sbjct: 465 ELVGAIG 471
>gi|289582088|ref|YP_003480554.1| FeS assembly protein SufB [Natrialba magadii ATCC 43099]
gi|289531641|gb|ADD05992.1| FeS assembly protein SufB [Natrialba magadii ATCC 43099]
Length = 476
Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 183/492 (37%), Positives = 279/492 (56%), Gaps = 22/492 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ D +++ D + ++ F+ K+ KGL E++IR IS K+EPDWMLE RL A
Sbjct: 1 MSSEQDHLKETDTEA-RFEFKKEQNAAVKSDKGLTEEVIRMISEDKDEPDWMLERRLRAL 59
Query: 63 RRWLTMKDPS--WARIRYPAIDFDDLYYYAAPK--SIVGPQSLDDVDPELLRTYEKLGIP 118
+++ M P+ + +D +++ Y P G ++ E+ T++KLGIP
Sbjct: 60 KQYHNMPMPTDWPGQPDLTELDVEEIVPYIRPDVDKREGVDDWTELPDEIKDTFDKLGIP 119
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E+ L+G V A ++S V +++ ++ GVIFM + A+ EHP+LVK++
Sbjct: 120 EAEKNALSG-------VGAQYESEIVYQNMQDQWEEKGVIFMNMDRAVQEHPELVKEHFM 172
Query: 179 T-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
T VP DN +AAL+ AV++ GSFVY+P+GV M + YFR+N +G GQFE TLIIA+E
Sbjct: 173 TTCVPASDNKFAALHGAVWSGGSFVYVPEGVTVEMPVQAYFRMNSEGMGQFEHTLIIAEE 232
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V Y+EGC+AP+ + LH+ VE+ ++A ++YSTVQNW +N TK
Sbjct: 233 GSEVHYIEGCSAPKYGVHNLHSGGVEVFVEEDAHVQYSTVQNW-------SKNTFNLNTK 285
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R + W GS T YP +L+G + +IA + Q ID+G K+ H
Sbjct: 286 RAIV-EENGTMEWISGSMGSKATMLYPCSILKGRGATDTHITIAFAGEGQDIDTGAKVYH 344
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A T S I SK IS YRG V + GA +S +CD+L+ N + T+PY+E
Sbjct: 345 NAPETKSTIESKSISKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNESTSDTMPYME 404
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ S ++ HEAT KI DE +FY RG+ ++ A +IV GF+ + ++LP+E+AVE
Sbjct: 405 IEESKVDVAHEATVGKIGDEDIFYLQSRGLDDDDAKKMIVAGFIEPITEELPIEYAVELN 464
Query: 478 KLIDISLEGSVG 489
+LI++ +EGS+G
Sbjct: 465 RLIELEMEGSLG 476
>gi|227432829|ref|ZP_03914788.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|227351414|gb|EEJ41681.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
Length = 477
Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 196/488 (40%), Positives = 288/488 (59%), Gaps = 20/488 (4%)
Query: 5 RETVDKVRKIDVDQ--YKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+E +++ + + + GF+ + Q V KGLNEDIIR ISAKKNEP WML++RL A
Sbjct: 7 QEAINQTKAAISNDKASELGFQDDYQAVFSTGKGLNEDIIRQISAKKNEPQWMLDYRLQA 66
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y+ +L M +W I F+D+YYY P + + DDV EL T+E+LG+P E
Sbjct: 67 YQTYLRMPMHTWGP-DLSEIHFEDIYYYNKP-TNDKYRDWDDVPAELKETFERLGVPEAE 124
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ LAG A ++S V KEE K+G++F A+ E+P+L+++Y ++V
Sbjct: 125 RKWLAGSS-------AQYESEVVYHRMKEEFAKTGIVFTDTDTAVQEYPELIQEYFGSLV 177
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
+N AALNSAV++ G+F+Y+PKGV + +YFRIN + GQFERTLII DEG++V
Sbjct: 178 KPTNNKLAALNSAVWSGGTFIYVPKGVHVTTPIQSYFRINTENEGQFERTLIIVDEGAHV 237
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGC+AP + LHAAVVE++ + +Y+T+QNW +Y+ TKR
Sbjct: 238 DYVEGCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNW-------SNNVYSLETKRAAA 290
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS T KYPS L GE + G SIA++ +DSG +M+H AKN
Sbjct: 291 H-ENATMEWVDGNFGSKTTMKYPSVYLEGEGAKGTMLSIAVAGEGVNLDSGAQMIHNAKN 349
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S I+SK I+ + YRG V R + S +CD++L+ + A TIPY N
Sbjct: 350 TSSSIISKSIAHDGGSTDYRGTVKFGRESDGSFAHVECDTILVDDKSSADTIPYNTILNG 409
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ ++EHEA S++S E L+Y + RGI E A +I+ GF+ ++LPME+AVE +L+
Sbjct: 410 NVSMEHEAKVSRVSKEQLYYLMTRGISAEKATEMIIMGFIEPFTKELPMEYAVELNRLMK 469
Query: 482 ISLEGSVG 489
+ GSVG
Sbjct: 470 FEMVGSVG 477
>gi|306820864|ref|ZP_07454486.1| FeS assembly protein SufB [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551106|gb|EFM39075.1| FeS assembly protein SufB [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 472
Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 182/490 (37%), Positives = 274/490 (55%), Gaps = 19/490 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M ++ V D+D+ Y + K+ KGLNE I+R IS KNEPDW+LE RL
Sbjct: 1 MEQIQAKKKSVIA-DIDRGIYDLKNEFTYSLKSDKGLNEAIVREISKNKNEPDWVLERRL 59
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + ++P W D D++ Y P++ + D + ++ T++ LGIP
Sbjct: 60 KSLEIFEKTENPPWGP-DLSGFDIDEITTYIRPRATLASN-WDTLPEDIRNTFDVLGIPE 117
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E+E LAG V A +DS V + K+ LK+ GVI+ AI ++P++VKKY
Sbjct: 118 AEKEKLAG-------VGAQYDSEEVYHSVKDYLKEQGVIYTDFDAAIRDYPEIVKKYFQK 170
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+P + YAAL+ AVF+ GSFVY+PKGV + L +Y+R+N G GQFE T+II +EG+
Sbjct: 171 AIPPTLHKYAALHGAVFSGGSFVYVPKGVNVDIPLQSYYRLNAPGAGQFEHTMIIVEEGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
++EGC+AP+ D LHA VE+ +NA +++ST++NW +YN TKR
Sbjct: 231 NCHFIEGCSAPKYDVTNLHAGSVEIFVEENATMRFSTIENW-------SRNMYNLNTKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ KI W GS ++ YP+ +L GE + E SI+ + Q +D+G ++ H A
Sbjct: 284 IVK-KNGKIQWVSGSFGSKVSMLYPASILIGEGASSELTSISFAGEGQYLDNGAQVFHYA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
NT S + +K IS+G +RG V AA S++ CDSL++ + TIP I+
Sbjct: 343 PNTRSSMNTKSISSGNGVCVFRGVVKTSENAAGSKSSVNCDSLMLSEESRSDTIPVIDLY 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ HEA KI + +FY + RGI E+ A A+IV GF V ++LP+E+AVE L
Sbjct: 403 TDDIDIGHEAKIGKIDETSIFYLMSRGISEQEARAMIVRGFAEPVAKELPIEYAVEMNNL 462
Query: 480 IDISLEGSVG 489
I++ LEG+ G
Sbjct: 463 INMELEGTNG 472
>gi|329572253|gb|EGG53913.1| FeS assembly protein SufB [Enterococcus faecalis TX1467]
Length = 450
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 188/449 (41%), Positives = 263/449 (58%), Gaps = 18/449 (4%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V GL ED++R IS K EP+WML++RL + ++ M W
Sbjct: 6 ELEEYKFGFHDDVEPVFSTGDGLTEDVVREISRVKGEPEWMLDFRLKSLEQFNKMPMQEW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDF + YY P + DDV ++ T+EK+GIP E+ LAG
Sbjct: 66 GP-DLSDIDFSKIKYYQKPSDKPA-RDWDDVPDKIKETFEKIGIPEAERAYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V KEE +K G+IF A+ E+PDL K+Y S +VP DN AALNS
Sbjct: 120 ---AQYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGVR + L TYFRIN + TGQFERTLII DEG+ V Y+EGCTAP
Sbjct: 177 AVWSGGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYS 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 237 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK I+
Sbjct: 289 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSIAK 348
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 349 DGGEVNYRGQVTFGKDSAGSISHIECDTIIMDEKSKSDTIPFNEIHNSQVSLEHEAKVSK 408
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
IS+E L+Y + RG+ E A +IV GFV
Sbjct: 409 ISEEQLYYLMSRGLSEAEATEMIVMGFVE 437
>gi|291459554|ref|ZP_06598944.1| FeS assembly protein SufB [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417832|gb|EFE91551.1| FeS assembly protein SufB [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 471
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 166/488 (34%), Positives = 274/488 (56%), Gaps = 19/488 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ +V ID Y + +E + K +GL+ +I+ IS KK +P WM ++RL +
Sbjct: 1 MARERTEVNDIDRSIYDFRYEEKDSDFYKIKEGLDREIVEEISEKKKDPAWMRDFRLRSL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ P+W +D ++ Y PK+ + D+V ++ T++KLGIP E+
Sbjct: 61 EIYNEKSIPTWGPP-IDGLDMKNIVTYVKPKTKMTAD-WDEVPKDIKETFDKLGIPQAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVV 181
+ LAG V A +DS V +EE GV++ + A+ + +++++ +V
Sbjct: 119 KSLAG-------VGAQYDSELVYHNLQEEAASKGVVYTDLESALHGPYAKMIEEHFMHLV 171
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII DEG+Y+
Sbjct: 172 PPTDHKFAALHGAVWSGGSFVYVPKGVSVEIPLQSYFRLNAPGAGQFEHTLIIVDEGAYL 231
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+AP+ + LHA VEL NA ++YST++NW +YN TKR
Sbjct: 232 HFIEGCSAPKYNIANLHAGCVELFVGKNAHLRYSTIENW-------SKNMYNLNTKRAIV 284
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ W GS +++ YP +L G + EF + + Q +D+G KM+H A++
Sbjct: 285 -AEGGTMEWVSGSFGSHVSYLYPMTILNGRGAKSEFTGVTFAGHGQNLDTGAKMVHNAED 343
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S I ++ IS +TYR V + R A ++++ C SL++ ++ + TIP ++ +
Sbjct: 344 TSSYINTRSISKDGGVSTYRSSVVIGRNAKNAKSAVSCQSLMLDSDSRSDTIPAMDVRTQ 403
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEA +ISD+ +FY + RG+ EE A A+IV+GF V ++LP+E+AVE LI
Sbjct: 404 QADVGHEARIGRISDDAVFYLMSRGLSEEDARAMIVSGFADTVSKELPLEYAVEMNNLIR 463
Query: 482 ISLEGSVG 489
+ + G++G
Sbjct: 464 LEMVGAIG 471
>gi|295107357|emb|CBL04900.1| Iron-regulated ABC transporter membrane component SufB
[Gordonibacter pamelaeae 7-10-1-b]
Length = 471
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 168/491 (34%), Positives = 263/491 (53%), Gaps = 22/491 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M A E V +D Y T+ GL DI+R ISAKK+EP WML++RL
Sbjct: 1 MPA--ENRTYVEDVDRTLYDVHDATDPARY-LDAGLTPDIVREISAKKDEPAWMLDFRLK 57
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
A + M P W +D D + Y P + D + ++ T+++LGIP
Sbjct: 58 ALDTYQRMLPPDWGP-GLEGLDMDHIVTYVKPNAEQASD-WDSLPDDVKNTFDRLGIPEA 115
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC--EHPDLVKKYLS 178
E+ LAG V A +DS V + ++ G+++ I EA+ E L+++
Sbjct: 116 ERAYLAG-------VGAQYDSELVYHSMQKTASDMGIVYSGIEEALRDPEWEPLIREKFM 168
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
T+VP D+ +AAL+ AV++ GSFVY+PKGV+ L +YFR+N KG GQFE TLII ++
Sbjct: 169 TLVPPDDHKFAALHGAVWSGGSFVYVPKGVKLDFPLQSYFRLNAKGAGQFEHTLIIVEDD 228
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + ++EGC+AP+ + LHA VEL A ++YST++NW +YN TKR
Sbjct: 229 ASLHFIEGCSAPKYNVANLHAGAVELFVGKRASLRYSTIENW-------SKNMYNLNTKR 281
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ + W GS + + YP +L G Q+ F I + Q +D+G K++
Sbjct: 282 ARVEEGGA-VEWISGSFGSHVGYLYPMSILAGRQAASSFTGITFAGAGQNLDTGCKVVLA 340
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +T++ + +K IS G +T+R + A+ S C SL++ + + TIP ++
Sbjct: 341 APDTSATVETKSISKGGGTSTFRSSIVATERASGSAASVSCQSLMLDDLSRSDTIPAMDI 400
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ ++ HEAT +I D+ +FY + RG+ EE A +IVNGF V ++LP+E+AVE
Sbjct: 401 RCKHVDIGHEATIGRIGDDKVFYLMSRGVSEEEARTMIVNGFADPVSKELPLEYAVEMNN 460
Query: 479 LIDISLEGSVG 489
LI + +EG++G
Sbjct: 461 LIKLEMEGAIG 471
>gi|300813430|ref|ZP_07093775.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512447|gb|EFK39602.1| FeS assembly protein SufB [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 470
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 183/487 (37%), Positives = 277/487 (56%), Gaps = 19/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
++ V +D Y + + K KGLNE+I+R IS +KNEP+WML++RL A
Sbjct: 2 TKKERTYVEDMDRGIY--DIKNAFEYRYKTSKGLNEEIVREISEEKNEPEWMLDYRLKAL 59
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ K+P W ++ +D+ Y PK+ + +D+ ++ T++KLGIP E+
Sbjct: 60 EIFNNSKNPVWGP-DLSDVNIEDITTYIRPKADLSTS-WEDLPEDIRNTFDKLGIPEAEK 117
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ V A +DS V + ++ L+ GVI+ + E+P++VKKY T +
Sbjct: 118 KQF------LSGVGAQYDSEVVYHSIQKYLRDQGVIYTDFESGLREYPEIVKKYFGTCIK 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ YAAL+ AV++ GSFVY+P+GV + L +YFR+N G GQFE TLII ++ SY
Sbjct: 172 PELHRYAALHYAVWSGGSFVYVPEGVNVDIPLQSYFRLNAPGAGQFEHTLIILEKNSYCH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VEL +N+ ++YST++NW +YN TKR
Sbjct: 232 FIEGCSAPRYNVVNLHAGAVELFVAENSTLRYSTIENW-------SRNMYNLNTKRAIV- 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
KI W GS ++ YP+ +L+GE S EF I+ + Q +D+G +++HLA NT
Sbjct: 284 EKNGKIQWISGSFGSKVSMLYPTSVLKGEGSTSEFTGISFAGAGQNLDTGAQVVHLAPNT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I +K IS YRG V A +S+N T C+SL++ + + TIP I KNS
Sbjct: 344 NSFIDTKSISKNGGIAVYRGLVEFSEDAKNSKNTTSCESLMLDEDSRSDTIPTIRLKNSE 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++ HEA KISD+ +FY + RG+ EE A L+V GF V ++LPME+AVE LI++
Sbjct: 404 VDVGHEAKIGKISDQVIFYLMTRGLSEEDAKQLVVRGFAEPVAKELPMEYAVEMNNLINL 463
Query: 483 SLEGSVG 489
L GS+G
Sbjct: 464 ELVGSIG 470
>gi|194701576|gb|ACF84872.1| unknown [Zea mays]
Length = 431
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 266/436 (61%), Positives = 331/436 (75%), Gaps = 5/436 (1%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
ML++RL AYRR+LTM +P+W+ Y +D + YY+APK+ SLD+VDPELL+T++
Sbjct: 1 MLDFRLAAYRRFLTMVEPTWSDNEYAPVDLQSICYYSAPKTKPKLNSLDEVDPELLKTFD 60
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+LGIP+ EQ+ L+ VAVDAV DS S+ TT +E L GVIF ISEAI E+PDL+
Sbjct: 61 RLGIPLTEQKRLS-----NVAVDAVIDSTSIATTHREALMAKGVIFCSISEAIREYPDLI 115
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++YL +VVP GDN+YAALNSAVF+DGSF ++PK CPME+STYFRIN+K TGQFERTLI
Sbjct: 116 RRYLGSVVPPGDNYYAALNSAVFSDGSFCFVPKDTVCPMEISTYFRINDKETGQFERTLI 175
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ADE S VSYLEGCTAP D NQLHAAVVELV + AEIKYSTVQNWY GD +GKGGIYN
Sbjct: 176 VADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEGAEIKYSTVQNWYSGDEEGKGGIYN 235
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG C+G SKISWTQ+ETGSAITWKYPS L G+ S GEFYS+A++ QQ D+GT
Sbjct: 236 FVTKRGRCKGHGSKISWTQVETGSAITWKYPSVELIGDDSVGEFYSVALTKDCQQADTGT 295
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H KN+ SRI+SKGISAG S N YRG V ++ A ++ N +QCDSLLIG+N A+T
Sbjct: 296 KMIHKGKNSRSRIISKGISAGKSRNCYRGLVLMNPSAENAYNSSQCDSLLIGDNAAANTY 355
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P I+ +S +EHEA+TSKI ++ LFY QRG+ E A+A ++ GF R V + LP EFA
Sbjct: 356 PTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGVDHEKAVAAMIGGFCRSVFEHLPYEFA 415
Query: 474 VEAQKLIDISLEGSVG 489
E L+++ LEGSVG
Sbjct: 416 QEVDALMNLKLEGSVG 431
>gi|295100507|emb|CBK98052.1| Iron-regulated ABC transporter membrane component SufB
[Faecalibacterium prausnitzii L2-6]
Length = 472
Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 167/495 (33%), Positives = 269/495 (54%), Gaps = 29/495 (5%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNI-----QVDKAPKGLNEDIIRFISAKKNEPDWML 55
M A V ++D Y +I GL +I+ IS +K++P+WM
Sbjct: 1 MRAFESEKTDVAEVDRSIY------DIRDGSNAAFTVSSGLTSEIVEKISEEKHDPEWMR 54
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+RL A + M +W +D +++ Y P + + + DV ++ T+E+L
Sbjct: 55 IFRLKALETYNKMPVQNWGP-SIAGLDMNNIVTYVRPNTEMRGK-WSDVPEDIKNTFERL 112
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVK 174
GIP E+ LAG V A +DS V K E+ GV++ + A+ + ++V+
Sbjct: 113 GIPKAERASLAG-------VGAQYDSEVVYHNVKAEVAAQGVVYTDMESALTGPYAEMVR 165
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
K+ +VP D+ +AAL+ AV++ GSFVY+P GV + L +YFR+N G GQFE TLII
Sbjct: 166 KHFMRLVPPTDHKFAALHGAVWSGGSFVYVPAGVHVEIPLQSYFRLNAPGAGQFEHTLII 225
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
D+G+Y+ ++EGC+AP+ + LHA VE+ +NA ++YST++NW +YN
Sbjct: 226 VDKGAYLHFIEGCSAPKYNVANLHAGCVEIYVGENARVRYSTIENW-------SKNMYNL 278
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
TKR I W GS + YP +L GE + EF I + Q +D+G K
Sbjct: 279 NTKRARV-EKGGTIEWVSGSFGSHTSCLYPMSILAGEGARMEFTGITFAGAGQDLDTGAK 337
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
++H A NT+S I +K I+ + +R V+V A +S++ C+SL++ + + TIP
Sbjct: 338 VVHAAPNTSSHITTKSIARDGGISNFRSSVTVLPNAKNSKSAVSCESLMLDDRSRSDTIP 397
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
++ + + ++ HEA +IS+E +FY + RG+ EE A ALIV GF + ++LP+E+AV
Sbjct: 398 EMDIRCDAVDVGHEAKIGRISEEAVFYLMSRGLSEEDARALIVGGFAEPIAKELPVEYAV 457
Query: 475 EAQKLIDISLEGSVG 489
E LI + ++GS+G
Sbjct: 458 EMNNLIHLEMKGSIG 472
>gi|283769602|ref|ZP_06342498.1| FeS assembly protein SufB [Bulleidia extructa W1219]
gi|283103870|gb|EFC05256.1| FeS assembly protein SufB [Bulleidia extructa W1219]
Length = 468
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 201/475 (42%), Positives = 286/475 (60%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
D YKYGF N+ KG++E+I+R IS K EP+WM E R+ A+ + + P W
Sbjct: 11 QDHYKYGFHDNVTSIIDTGKGISEEIVRQISKLKKEPEWMCEKRIQAFHIFEKLSLPKWG 70
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDF D Y+ S +S DV E+ T+EKLGIP E+E LAGV T
Sbjct: 71 P-DLQDIDFQDFTYFRR-VSNETGKSWQDVPEEVKNTFEKLGIPQAEREFLAGVTT---- 124
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
++S +V + +E+++ GVIF+ I A+ E+PDL KKY T+V GDN AALNSA
Sbjct: 125 ---QYESEAVYHSMLKEVEEKGVIFLDIDSALKEYPDLFKKYFGTIVSAGDNKLAALNSA 181
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+P GV+ L +YFRIN + GQFER++II D+G+ +SY+EGCTAPQ +
Sbjct: 182 VWSGGSFIYVPPGVKLEKPLQSYFRINSESMGQFERSIIIVDDGAEISYVEGCTAPQYSK 241
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE+ A+ +YS+VQNW G I N VTKR S + W
Sbjct: 242 DSLHAAVVEVFVGKQAKCRYSSVQNW-------SGNILNLVTKRAKVEEDGS-MEWIDGN 293
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS IT KYPSC+L G ++ G SIA+ + Q DSG KM+H+A +T S I+SK +S
Sbjct: 294 IGSRITMKYPSCILAGARATGLCISIAVGSQNQFQDSGAKMIHVAPDTKSSIISKSVSRN 353
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+R ++ + A +++ +CD+L++ N + TIP + NS +EHEA SKI
Sbjct: 354 GGVTNFRDEIRILPQADRAKSHIECDTLILDNRSKSDTIPVDINLNSHSTIEHEAKVSKI 413
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S++ LFY + RG+ EE A +IV GF+ ++LPME+AVE +L+ + + GS+G
Sbjct: 414 SEDQLFYLMSRGLSEEQATEMIVMGFLEPFTRELPMEYAVELNQLLKLDMSGSIG 468
>gi|16081353|ref|NP_393681.1| hypothetical protein Ta0203 [Thermoplasma acidophilum DSM 1728]
gi|10639347|emb|CAC11349.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 481
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 190/489 (38%), Positives = 286/489 (58%), Gaps = 22/489 (4%)
Query: 6 ETVDKVRK--IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
E +D++ YGF NI V KGL+ ++ IS K EPDWM RL AY
Sbjct: 10 EEIDRLINDLKSNGSLDYGFHDNINPVYSTGKGLSRQVVEEISEIKKEPDWMRRIRLHAY 69
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+++ P+W ID++++ YY+ P + D+V E+ T+EKLG+P E+
Sbjct: 70 EIFMSKPVPTWGP-DLSGIDWENMTYYSRPDEVKATN-WDEVPKEIKDTFEKLGVPEMER 127
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A +DS + + K+E ++ GV+FM + A+ +PDLVK+Y + VP
Sbjct: 128 KYLAGS-------IAQYDSEGIYNSIKKEWEEKGVVFMDLDSALKRYPDLVKEYFAKAVP 180
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN +AALN AV++ G+F+Y+P+GV M L TYFRIN + TGQFE T+++ADEGS V
Sbjct: 181 PSDNKFAALNVAVWSGGAFLYVPRGVHVDMPLQTYFRINGEATGQFEHTIVVADEGSSVH 240
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
YLEGCTAP ++ LHAA+VE + NA +Y++VQNW +YN TKR
Sbjct: 241 YLEGCTAPVYSKDSLHAAIVEYYVMKNAHGRYTSVQNW-------SNSVYNMPTKRAWV- 292
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ W GS +T YPS LRG + +IA++ D+G K +H+A NT
Sbjct: 293 EENGNMEWVGGSLGSKVTMIYPSSYLRGRNATTSNLNIALAGPGTVKDTGAKAIHMAPNT 352
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S+I++K +S G + YRG V +++ A ++++ QCD+LLI + ++T+P+ E +
Sbjct: 353 SSKIIAKSVSLGDGKSIYRGLVRINKDAVNAKSHVQCDALLINDESVSYTMPHDEIYEPT 412
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
N HEAT KI E L Y RG+ E+ A +LIV GF+ +V++++PMEFAVE +L+ +
Sbjct: 413 ANFTHEATVGKIGTEELTYLRSRGLSEDEASSLIVLGFLDDVMKEIPMEFAVEMNRLVKL 472
Query: 483 SLE--GSVG 489
+ G+VG
Sbjct: 473 EMSKMGAVG 481
>gi|170017843|ref|YP_001728762.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
gi|169804700|gb|ACA83318.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
Length = 476
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 194/484 (40%), Positives = 278/484 (57%), Gaps = 28/484 (5%)
Query: 10 KVRKID----VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ +KID D Y+ F T +GLNE +IR ISA+K EP+WML +RL AY+ +
Sbjct: 17 QTKKIDELGRQDDYQAVFST-------GRGLNESVIRAISAEKKEPEWMLNYRLRAYQSY 69
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
L M +W IDFD +YYY P + + DV L +T+E+LG+P E+ L
Sbjct: 70 LDMPMQTWGP-DLSDIDFDAIYYYNKP-THEKYRDWQDVPDTLKQTFERLGVPEAERRWL 127
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
AG A ++S V K E +K+G++F A+ E+P+LVK Y ++V +
Sbjct: 128 AGSS-------AQYESEVVYHRMKAEFEKTGIVFTDTDTAVQEYPELVKAYFGSLVKPTN 180
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N AALN+AV++ G+F+Y+PKGV + +YFRIN GQFERTLII DEG++V Y+E
Sbjct: 181 NKLAALNAAVWSGGTFIYVPKGVHVTTPIQSYFRINTANEGQFERTLIIVDEGAHVDYVE 240
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP + LHAAVVE++ + +Y+T+QNW +Y+ TKR
Sbjct: 241 GCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNW-------SNNVYSLETKRAAAH-EN 292
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W GS T KYPS L GE + G SIA++ +DSG +M+H AKNT+S
Sbjct: 293 ATMEWVDGNFGSKTTMKYPSVYLEGEGARGTMLSIAVAGQEVTLDSGAQMIHHAKNTSSS 352
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
IVSK I+ YRG + R + S +CD++L+ + A TIPY N + ++
Sbjct: 353 IVSKSIAHDGGATDYRGTIKFGRESDGSFAHVECDTILMDDQSSADTIPYNTILNGNVSM 412
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
EHEA S++S+E L+Y + RGI E A +IV GFV ++LPME+AVE +L+ +
Sbjct: 413 EHEAKVSRVSEEQLYYLMSRGISPEKATEMIVMGFVEPFTKELPMEYAVELNRLMKFEMI 472
Query: 486 GSVG 489
GSVG
Sbjct: 473 GSVG 476
>gi|282882753|ref|ZP_06291360.1| FeS assembly protein SufB [Peptoniphilus lacrimalis 315-B]
gi|281297414|gb|EFA89903.1| FeS assembly protein SufB [Peptoniphilus lacrimalis 315-B]
Length = 470
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 183/487 (37%), Positives = 276/487 (56%), Gaps = 19/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
++ V +D Y + + K KGLNE+I+R IS +KNEP WML++RL A
Sbjct: 2 TKKERTYVEDMDRGIY--DIKNAFEYRYKTSKGLNEEIVREISEEKNEPKWMLDYRLKAL 59
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ K+P W ++ +D+ Y PK+ + +D+ ++ T++KLGIP E+
Sbjct: 60 EIFNNSKNPVWGP-DLSDVNIEDITTYIRPKADLSTS-WEDLPEDIRNTFDKLGIPEAEK 117
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ V A +DS V + ++ L+ GVI+ + E+P++VKKY T +
Sbjct: 118 KQF------LSGVGAQYDSEVVYHSIQKYLRDQGVIYTDFESGLREYPEIVKKYFGTCIK 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ YAAL+ AV++ GSFVY+P+GV + L +YFR+N G GQFE TLII ++ SY
Sbjct: 172 PELHRYAALHYAVWSGGSFVYVPEGVNVDIPLQSYFRLNAPGAGQFEHTLIILEKNSYCH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VEL +N+ ++YST++NW +YN TKR
Sbjct: 232 FIEGCSAPRYNVVNLHAGAVELFVAENSTLRYSTIENW-------SRNMYNLNTKRAIV- 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
KI W GS ++ YP+ +L+GE S EF I+ + Q +D+G +++HLA NT
Sbjct: 284 EKNGKIQWISGSFGSKVSMLYPTSVLKGEGSTSEFTGISFAGAGQNLDTGAQVVHLAPNT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I +K IS YRG V A +S+N T C+SL++ + + TIP I KNS
Sbjct: 344 NSFIDTKSISKNGGIAVYRGLVEFSEDAKNSKNTTSCESLMLDEDSRSDTIPTIRLKNSE 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++ HEA KISD+ +FY + RG+ EE A L+V GF V ++LPME+AVE LI++
Sbjct: 404 VDVGHEAKIGKISDQVIFYLMTRGLSEEDAKQLVVRGFAEPVAKELPMEYAVEMNNLINL 463
Query: 483 SLEGSVG 489
L GS+G
Sbjct: 464 ELVGSIG 470
>gi|257792014|ref|YP_003182620.1| FeS assembly protein SufB [Eggerthella lenta DSM 2243]
gi|317488648|ref|ZP_07947190.1| FeS assembly protein SufB [Eggerthella sp. 1_3_56FAA]
gi|325831681|ref|ZP_08164898.1| FeS assembly protein SufB [Eggerthella sp. HGA1]
gi|257475911|gb|ACV56231.1| FeS assembly protein SufB [Eggerthella lenta DSM 2243]
gi|316912254|gb|EFV33821.1| FeS assembly protein SufB [Eggerthella sp. 1_3_56FAA]
gi|325486552|gb|EGC89001.1| FeS assembly protein SufB [Eggerthella sp. HGA1]
Length = 471
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 162/478 (33%), Positives = 260/478 (54%), Gaps = 20/478 (4%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DVD+ Y + GL DI+R ISAKK+EP WML++RL A + M+ P W
Sbjct: 11 DVDRTLYDISDATDPSLRLDAGLTPDIVREISAKKDEPSWMLDFRLKALDTYQRMEAPDW 70
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D + Y P + + + ++ T+++LGIP E+ LAG
Sbjct: 71 GP-GLEGLDMDHIVTYVKPATDQQAD-WESLPDDVKNTFDRLGIPEAERAYLAG------ 122
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVPVGDNFYAAL 191
V A +DS V ++ G+++ I EA+ E L+++ T++P D+ +AAL
Sbjct: 123 -VGAQYDSELVYHNMQKTAADMGIVYSGIEEALREPKWEALIREKFMTLIPPTDHKFAAL 181
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+ AV++ GSFVY+PKGV+ L +YFR+N KG GQFE TLII ++ + + ++EGC+AP+
Sbjct: 182 HGAVWSGGSFVYVPKGVKLDFPLQSYFRLNAKGAGQFEHTLIIVEDDASLHFIEGCSAPK 241
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ LHA VEL A ++YST++NW +YN TKR + + + W
Sbjct: 242 YNVANLHAGAVELFVGKRASLRYSTIENW-------SKNMYNLNTKRAVVQEGGA-VEWI 293
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS + + YP +L G +S F I + Q +D+G K++ A +T++ + +K I
Sbjct: 294 SGSFGSHVGYLYPMSILAGRKSTSSFTGITFAGAGQNLDTGCKVVLAAPDTSATVETKSI 353
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S G +T+R + A + C SL++ + + TIP ++ + ++ HEAT
Sbjct: 354 SKGGGASTFRSSIVATENARGAAASVSCQSLMLDDISRSDTIPAMDIRCKHVDIGHEATI 413
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I D+ +FY + RG+ EE A +IVNGF V ++LP+E+AVE LI + +EG++G
Sbjct: 414 GRIGDDKVFYLMSRGVSEEEARTMIVNGFADPVSKELPLEYAVEMNNLIKLEMEGAIG 471
>gi|221194413|ref|ZP_03567470.1| FeS assembly protein SufB [Atopobium rimae ATCC 49626]
gi|221185317|gb|EEE17707.1| FeS assembly protein SufB [Atopobium rimae ATCC 49626]
Length = 472
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 173/488 (35%), Positives = 281/488 (57%), Gaps = 21/488 (4%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ + D+++ Y F + + ++ GL +I+R ISAKK+EP+WML++RL A
Sbjct: 2 SEKKRSQVADINRSLYDFTKSEEGYERYADGLTPEIVRTISAKKDEPEWMLQFRLSALET 61
Query: 65 WLTMKDP-SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ T +W +D D + Y +PK+ + DDV ++ T+E+LGIP E E
Sbjct: 62 YHTRDMASNWGP-SITGLDMDHISTYVSPKTKQ-SNNWDDVPEDIRDTFERLGIPKAEAE 119
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVV 181
LAG V A +DS V ++E+ + GVI+ I +A+ + +VK+Y T++
Sbjct: 120 SLAG-------VGAQYDSEIVYHNMRKEVAEQGVIYTTIEDALHDPKWEPVVKQYFGTLI 172
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P D+ +AAL+ AV++ GSFVY+P GV L +YFR+N +G GQFE TLII ++G+ +
Sbjct: 173 PPADHKFAALHYAVWSGGSFVYVPAGVSLDYPLQSYFRLNAQGAGQFEHTLIIVEKGADL 232
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+AP+ LHA VEL D A ++YST++NW +YN TKR
Sbjct: 233 HFIEGCSAPKYYAANLHAGAVELFVKDGARLRYSTIENW-------SKNMYNLNTKRALV 285
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G +++ W GS +++ YPS +L G++S +F I + Q +D+G K++ +
Sbjct: 286 -GSDARMEWVSGSFGSHVSYLYPSTILNGDRSNCDFTGITFAGATQDLDTGCKVIINGAD 344
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+ + +K IS NT+R V++ R AA++R C SL++ + + TIP ++ +N+
Sbjct: 345 NTASVDTKSISKDGGVNTFRSAVTIGRKAANARVSVSCQSLMLDDISRSDTIPEMDVRNA 404
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ + HEAT +ISD+ + Y + RG E A ++VNGF V ++LPME+AVE LI
Sbjct: 405 TAQVGHEATIGRISDDTILYLMSRGCSEAEARTMVVNGFANPVSKELPMEYAVEMNNLIK 464
Query: 482 ISLEGSVG 489
+ +EG++G
Sbjct: 465 LEMEGAIG 472
>gi|229828847|ref|ZP_04454916.1| hypothetical protein GCWU000342_00932 [Shuttleworthia satelles DSM
14600]
gi|229792010|gb|EEP28124.1| hypothetical protein GCWU000342_00932 [Shuttleworthia satelles DSM
14600]
Length = 470
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 171/487 (35%), Positives = 268/487 (55%), Gaps = 18/487 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + V ID Y + + K +GL I+ IS +K +PDWM E+RL +
Sbjct: 1 MSKEKTYVDDIDRSLYDFRY-DEKDAYKVEEGLTPAIVEQISEEKKDPDWMREFRLSCLK 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P W +D +++ Y P+ + V ++ T+EKLGIP E+E
Sbjct: 60 IYEETAFPQWGP-SIDGLDMNNIVTYIRPRDNHMVKDWKQVPKDIKDTFEKLGIPQAERE 118
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVP 182
LAG V A +DS V +EE+ GVI+ + A+ + +++ + +VP
Sbjct: 119 SLAG-------VGAQYDSELVYHNVREEVAAQGVIYTDLESALHGPYAQMIRDHFMKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D+ +AAL+ AV++ GSFVY+P GV + L +YFR+N G GQFE TLII DEG+Y+
Sbjct: 172 ATDHKFAALHGAVWSGGSFVYVPPGVSVEIPLQSYFRLNAAGAGQFEHTLIIVDEGAYLH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + LHA VEL NA ++YST++NW +YN TKR
Sbjct: 232 FIEGCSAPKYNVANLHAGCVELYVGKNATLRYSTIENW-------SKNMYNLNTKRARV- 283
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
KI W GS +++ YPS L GE + EF S+ + Q +D+G K++H A NT
Sbjct: 284 EEGGKIEWISGSFGSHVSYLYPSSYLVGEGARSEFTSVTFAGKGQNLDTGCKVVHNAPNT 343
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+S + ++ IS +T+R V+V A ++ C SL++ + + TIP ++ + +
Sbjct: 344 SSYVNTRSISKSGGISTFRSSVNVTPRAKGAKASVSCASLMLDDISRSDTIPAMDIRTAD 403
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
++ HEA +ISDE +FY + RG+ EE A ALIV+GF V ++LP+E+AVE LI +
Sbjct: 404 ADIGHEAKIGRISDETVFYLMSRGMSEEDARALIVSGFADNVGKELPLEYAVEMNNLIRL 463
Query: 483 SLEGSVG 489
++G++G
Sbjct: 464 EMKGAIG 470
>gi|229825143|ref|ZP_04451212.1| hypothetical protein GCWU000182_00494 [Abiotrophia defectiva ATCC
49176]
gi|229790515|gb|EEP26629.1| hypothetical protein GCWU000182_00494 [Abiotrophia defectiva ATCC
49176]
Length = 474
Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 278/489 (56%), Gaps = 20/489 (4%)
Query: 1 MVAV-RETVDKVRKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M + + + ID Y + ++ N + K KGL+ DI+ IS +KN+P+WM ++R
Sbjct: 1 MAELDKNEKMVIDDIDSSFYDFRYDENDEDFLKLDKGLSTDIVLQISKEKNDPEWMRDFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L + + +K P W +D + + Y K + + ++V ++ T+EKLGIP
Sbjct: 61 LKSLDIYNKLKAPDWGP-SIEGLDMNTIMTYVRHKGDMKGK-WEEVPEDIKNTFEKLGIP 118
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYL 177
E+ LAG V A +DS V +EE+ GV++ + A+ E+ D++ +Y
Sbjct: 119 EAERLSLAG-------VGAQYDSELVYHNVREEVAALGVVYTDLESAMHGEYGDMIHEYF 171
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
++P D+ +AAL+ AV++ GSFVY+PKGV+ + L +YFR+N G GQFE TLII DE
Sbjct: 172 MKLIPPTDHKFAALHGAVWSGGSFVYVPKGVKVDIPLQSYFRLNAAGAGQFEHTLIIVDE 231
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + ++EGC+AP+ + LHA VEL NA ++YST++NW +YN TK
Sbjct: 232 GADLHFIEGCSAPKYNVANLHAGAVELFVKKNARLRYSTIENW-------SKNMYNLNTK 284
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R I W GS +++ YP +L+G S EF I + Q +D+G KM+H
Sbjct: 285 RAIV-EENGVIEWVSGSFGSHVSYLYPMSILKGNGSRSEFTGITFAGKGQNLDTGAKMVH 343
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ ++T+S I +K +S G NTYR V+V A S+ F C SL++ ++ + TIP ++
Sbjct: 344 IGEDTSSIINTKSVSKGGGTNTYRSMVTVRESAKRSKAFVSCQSLMLDSDSRSDTIPAMD 403
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ ++ HEA +ISD+ +FY + RGI EE A A+IV+GF V ++LP+E+AVE
Sbjct: 404 IRTDDTDIGHEAKIGRISDDAVFYLMSRGISEEEARAMIVSGFANPVSKELPLEYAVEMN 463
Query: 478 KLIDISLEG 486
LI + ++G
Sbjct: 464 NLIQLEMKG 472
>gi|296111532|ref|YP_003621914.1| ABC transporter component, iron regulated (putative) [Leuconostoc
kimchii IMSNU 11154]
gi|295833064|gb|ADG40945.1| ABC transporter component, iron regulated (putative) [Leuconostoc
kimchii IMSNU 11154]
Length = 476
Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats.
Identities = 197/471 (41%), Positives = 280/471 (59%), Gaps = 18/471 (3%)
Query: 20 KYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
+ GF+ N Q V KG+NE IIR ISAKK EP WML++RL AY+ +L M +W
Sbjct: 23 ELGFQDNYQAVFSTGKGINETIIRQISAKKKEPQWMLDYRLQAYQTYLDMPMQTWGP-DL 81
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
I+FDD+YYY P + + DDV EL T+E+LG+P E++ LAG A
Sbjct: 82 SDINFDDIYYYNKP-TNDKYRDWDDVPAELKATFERLGVPEAERKWLAGSS-------AQ 133
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
++S V K E +K+G+IF A+ E+P+LV+ Y ++V +N AALNSA ++
Sbjct: 134 YESEVVYHKMKAEFEKTGIIFTDTDTAVQEYPELVQAYFGSLVKPTNNKMAALNSAAWSG 193
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G+F+Y+PKGVR + +YFRIN + GQFERTLII DEG++V Y+EGC+AP + LH
Sbjct: 194 GTFIYVPKGVRVTTPIQSYFRINTENEGQFERTLIIVDEGAHVDYVEGCSAPMYSGDALH 253
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVE++ +A +Y+T+QNW +Y+ TKR + + W GS
Sbjct: 254 AAVVEVIVKKDAYCRYTTIQNW-------SNNVYSLETKRAAAH-ENATMEWVDGNFGSK 305
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
T KYPS L GE + G SIA++ +DSG +M+H AKNT+S I+SK I+
Sbjct: 306 TTMKYPSVYLEGEGARGTMLSIAVAGSGVHLDSGAQMIHHAKNTSSSIISKSIAHDGGVT 365
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
YRG V R + S +CD++L+ + A TIPY N + ++EHEA S++S+E
Sbjct: 366 DYRGTVKFGRESDGSFAHVECDTILVDDQSSADTIPYNTILNGNVSMEHEAKVSRVSEEQ 425
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
L+Y + RGI E A +IV GF+ ++LPME+AVE +L+ + GSVG
Sbjct: 426 LYYLMTRGISAEKATEMIVMGFIEPFTKELPMEYAVELNRLMKFEMVGSVG 476
>gi|256827692|ref|YP_003151651.1| Iron-regulated ABC transporter membrane component SufB
[Cryptobacterium curtum DSM 15641]
gi|256583835|gb|ACU94969.1| Iron-regulated ABC transporter membrane component SufB
[Cryptobacterium curtum DSM 15641]
Length = 472
Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats.
Identities = 170/488 (34%), Positives = 263/488 (53%), Gaps = 24/488 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M A + V +V D+ Y F + + D+ GL DI+R ISA+K+EP WML+ RL
Sbjct: 1 MAAETQAVTEV-----DRSLYDFIKSEEGYDRLDAGLTPDIVREISARKDEPQWMLDLRL 55
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + M P W +D D + Y P + + V ++ T+E+LGIP
Sbjct: 56 ESLEIYNRMPVPDWGP-SVEGLDMDHIVTYVKPPTEQKSD-WESVPDDIKDTFERLGIPQ 113
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLS 178
E+ LAG V A +DS V ++ + K GV++ I EA+ E+ DL++++
Sbjct: 114 AERAYLAG-------VGAQYDSELVYHNIQDTVAKEGVVYSGIEEALHGEYADLIREHFM 166
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
++ D+ +AAL+ AV++ GSFVY+P+GV+ L +YFR+N KG GQFE TLII ++
Sbjct: 167 KLITPEDHKFAALHGAVWSGGSFVYVPRGVKMDFPLQSYFRLNAKGAGQFEHTLIIVEDD 226
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + ++EGC+AP+ + LHA VEL NA ++YST++NW +YN TKR
Sbjct: 227 ADLHFIEGCSAPKYNVANLHAGAVELFVGKNARLRYSTIENW-------SKNMYNLNTKR 279
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
KI W GS + + YP ++ G S EF I S Q +D+G K++
Sbjct: 280 AVV-DDNGKIEWVSGSFGSHVGYLYPMSIMNGADSSCEFTGITFSGATQNLDTGCKVVLN 338
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A + I +KGIS T+R V V A + + C SL++ + + TIP ++
Sbjct: 339 APRAAAHIDTKGISKDGGVQTFRSSVLVTEAAEDADVYVSCQSLMLDDLSRSDTIPAMDV 398
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ N+ HEA+ +I D+ +FY RGI E+ A +IVNGF + ++LP+E+AVE
Sbjct: 399 RAEHVNVGHEASIGRIGDDMMFYLRSRGISEQEASTMIVNGFADPISKELPLEYAVEMNN 458
Query: 479 LIDISLEG 486
LI + +EG
Sbjct: 459 LIKLEMEG 466
>gi|160902128|ref|YP_001567709.1| FeS assembly protein SufB [Petrotoga mobilis SJ95]
gi|160359772|gb|ABX31386.1| FeS assembly protein SufB [Petrotoga mobilis SJ95]
Length = 471
Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats.
Identities = 176/489 (35%), Positives = 273/489 (55%), Gaps = 19/489 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+A E V+ + + VDQ K+ F+ V K GLNE +++ IS +K EP WM + RL
Sbjct: 1 MAKNENVN-IEDLLVDQSKFDFKNPETYVYKTIPGLNEKVVQEISEQKEEPTWMRDLRLK 59
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+ + T +DP + + +D + Y P+ DDV E+ T++KLGIP
Sbjct: 60 SLHIFNTWRDPRFG-VDVSDLDVSKIVAYIRPRGKTSGS-WDDVPAEIKDTFDKLGIPEA 117
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E++ LAG V A +DS V K+EL+ GVIF+ + A+ E+PDLVK+Y
Sbjct: 118 EKKALAG-------VGAQYDSEIVYQNIKKELENLGVIFLNMESAVKEYPDLVKEYFMKA 170
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
V ++ YAAL+ AV++ G+F+YIPKGV+ P+ L YFR+N G GQ E T+I+ADEGS
Sbjct: 171 VAPTNHKYAALHGAVWSGGTFLYIPKGVKVPLPLQAYFRMNNPGMGQMEHTIIVADEGSE 230
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V+++EGC+AP + LHA +VE+ A +KY+T+QNW YN TKR
Sbjct: 231 VAFIEGCSAPYYEITNLHAGMVEIYVKKGARVKYATIQNW-------SKNTYNLNTKRAI 283
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ W GS T YPS +L+G+ + E +I + Q +DSG+K+ A
Sbjct: 284 V-DEDGIMEWVSGSLGSHKTMIYPSSILKGKGAKTETKAITYAGPNQHMDSGSKVFMFAP 342
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
T++ + ++ IS G YRG + V A ++ C +L++ N + T+P IE
Sbjct: 343 YTSANVDARSISIGGGWAFYRGWLKVGENAKGAKASVSCQALMLDNESKSDTVPLIEVYT 402
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
++ HEA +I +E ++Y + RG+ E A A++V GFV ++LP+E+A+E +LI
Sbjct: 403 DDADVGHEARIGRIKEEQIYYLMSRGLSEAEAKAMVVRGFVEPFAKELPLEYAIELNRLI 462
Query: 481 DISLEGSVG 489
++ +E S+G
Sbjct: 463 NLEVESSIG 471
>gi|225154859|ref|ZP_03723357.1| FeS assembly protein SufB [Opitutaceae bacterium TAV2]
gi|224804389|gb|EEG22614.1| FeS assembly protein SufB [Opitutaceae bacterium TAV2]
Length = 498
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 211/470 (44%), Positives = 301/470 (64%), Gaps = 18/470 (3%)
Query: 22 GFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS-WARIRYP 79
F ++ + A GL+E+ +R+ISA K E W+LE+RL A + +L P+ WA
Sbjct: 45 DFTYDVAYEFDAGSGLSENTVRYISAVKKEAPWILEFRLNALKTFLDKPMPTHWATKDLE 104
Query: 80 AIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVF 139
IDF + YY A ++ D+V ++ +T+E+LGIP +E++ LAG V+A F
Sbjct: 105 NIDFAKIRYYLAQGQKPK-RTWDEVPDDIKKTFERLGIPEQERKFLAG-------VEAQF 156
Query: 140 DSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG 199
DS + + K+ + K GVIFM +EA+ EHP+L +K+ V+P DN ++ALNSAVF+ G
Sbjct: 157 DSEAAYSNVKDIVAKQGVIFMNSTEALREHPELFRKWFGKVIPTADNKFSALNSAVFSGG 216
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
SF+Y+P GV+ L YFRIN + GQFERTLIIADEG+ V+Y+EGCTAP+ + LH+
Sbjct: 217 SFIYVPPGVKVAQPLQAYFRINAENFGQFERTLIIADEGAEVTYMEGCTAPKFSTSTLHS 276
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
AVVELVAL A+I+Y TVQNW P +YN VTKRG ++I W GS +
Sbjct: 277 AVVELVALKGAKIQYITVQNWAP-------NVYNLVTKRGLAH-ENAEIKWIDCNIGSRL 328
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
T KYP +L+G ++ GE SIA++N Q D+G KM+H A TTS IVSK IS G T
Sbjct: 329 TMKYPGVVLKGRKARGEVISIALANDGQHQDTGAKMIHAADETTSTIVSKSISVGQGRAT 388
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
YRG+V + + +N T+CD+LLI N T P I + + ++HEA+ SK+S+E +
Sbjct: 389 YRGQVHIPKHLKGCKNNTECDALLINTNSRTDTYPAITVRGDTHAVQHEASVSKVSEEQI 448
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
FY QRG+ E A++L VNGFV +++++ PME++VE ++LID+ +EGSVG
Sbjct: 449 FYMQQRGLTEAQAMSLAVNGFVNDLVRQFPMEYSVELKRLIDLEMEGSVG 498
>gi|302669426|ref|YP_003829386.1| FeS assembly protein SufB [Butyrivibrio proteoclasticus B316]
gi|302393899|gb|ADL32804.1| FeS assembly protein SufB [Butyrivibrio proteoclasticus B316]
Length = 469
Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 172/485 (35%), Positives = 272/485 (56%), Gaps = 19/485 (3%)
Query: 4 VRETVDKVRKIDVDQYKY-GFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + V ID Y + E+ + +GL ++ + +S +KN+P+WM ++RL
Sbjct: 1 MSDNKQIVADIDRSLYDFKDVESEKDFYRMAEGLTKETVLKVSEEKNDPEWMRDFRLKCL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ +K P+W +D D + Y KS + + +DV ++ T+EKLGIP E+
Sbjct: 61 ELYEQIKMPNWGP-SIEGLDMDRISSYVRHKSDMKGK-WEDVPEDIKNTFEKLGIPQAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVV 181
E LAG V A +DS V K+E+ GVI+ + AI E+ D++K++ +V
Sbjct: 119 ESLAG-------VGAQYDSELVYHNVKDEVAAQGVIYTDLESAIHGEYADMIKEHFMKLV 171
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P D+ +AAL+ AV++ GSFVY+PKGV+ + L +YFR+N G GQFE TLII DEG+ +
Sbjct: 172 PPTDHKFAALHGAVWSGGSFVYVPKGVKVEIPLQSYFRLNAAGAGQFEHTLIIVDEGADL 231
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+AP+ + LHA VEL A ++YST++NW +YN TKR
Sbjct: 232 HFIEGCSAPKYNVANLHAGCVELFVGKGARLRYSTIENW-------SKNMYNLNTKRAVV 284
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ W GS ++ YP +L+G S EF I + Q +D+G K++H+ +
Sbjct: 285 -EENGIMEWVSGSFGSHTSYLYPMTILKGNGSKMEFTGITFAGKGQNLDTGAKVVHVGER 343
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S I +K IS TYR V++ + A ++ CDSL++ + A T+P ++ + +
Sbjct: 344 TSSVISTKSISKDGGIGTYRSSVTIQKTAKKAKASVSCDSLMLDSISRADTVPAMDIRTN 403
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEA +ISDE +FY + RGI EE A A+IV+GF V ++LP+E+AVE LI
Sbjct: 404 DADVGHEAKIGRISDEAIFYLMSRGISEEDAKAMIVSGFANPVSKELPLEYAVEMNNLIK 463
Query: 482 ISLEG 486
+ + G
Sbjct: 464 LEMSG 468
>gi|26554197|ref|NP_758131.1| hypothetical protein MYPE7410 [Mycoplasma penetrans HF-2]
gi|26454206|dbj|BAC44535.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
Length = 465
Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 204/479 (42%), Positives = 281/479 (58%), Gaps = 18/479 (3%)
Query: 12 RKIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+K +YKYGF KGL+ D+I+ IS KNEP+WML+ RL AY ++L +
Sbjct: 4 KKEVDQEYKYGFSDGENSILNTKKGLSVDVIKQISKIKNEPEWMLDIRLKAYEKFLQTPN 63
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P W I++DD+ YY + + D V ++ +T+EKLGIP E + L G
Sbjct: 64 PDWG-ADLSNINYDDIIYYTSSTKKME-SYWDKVPEQIKKTFEKLGIPEAEAKFLNG--- 118
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
V A +DS +V +EEL + GVIF + A+ ++P LVKK+ +VP DN +A
Sbjct: 119 ----VSAQYDSETVYKKLEEELVQKGVIFTNVETAVLKYPKLVKKFFGKLVPYDDNKFAM 174
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LN+AV++ GSFVY+PK V L YFRIN +GQFERTLII DEG+ V Y+EGCTAP
Sbjct: 175 LNTAVWSGGSFVYVPKNVHLEKPLQAYFRINGISSGQFERTLIIVDEGASVHYVEGCTAP 234
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
E+ LHAAVVE NA++KY+T+QNW + N VTKR + +SW
Sbjct: 235 VYSESNLHAAVVECYVHKNAKLKYTTIQNW-------SKNVLNLVTKRAIVH-ENANMSW 286
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
G+ I KYPS +L G+ + + SIAI++ D+G KM+HLA T SRIVSK
Sbjct: 287 IDGNIGAGINMKYPSSVLAGKYASSDCISIAIASNNVVQDAGAKMIHLAPYTKSRIVSKS 346
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+S + YRG V + + A HS + +CD+LL+ + TIP KN LEHEA
Sbjct: 347 VSFNGGDTRYRGLVKMEKDAVHSHSRVECDTLLLDEISRSDTIPLEIIKNKQSFLEHEAK 406
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S IS+E LFY + +GI ++ A LIV GF+ ++LPME+A+E +LI + +EGSVG
Sbjct: 407 VSNISEEQLFYFMNKGISKDEAEYLIVMGFLEPFSKELPMEYAIELNRLIKLDMEGSVG 465
>gi|13542221|ref|NP_111909.1| membrane component of an uncharacterized iron-regulated ABC-type
transporter [Thermoplasma volcanium GSS1]
gi|14325655|dbj|BAB60558.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 481
Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 194/490 (39%), Positives = 292/490 (59%), Gaps = 24/490 (4%)
Query: 6 ETVDKVRKIDVDQYK---YGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E +D++ D+ K YGF NI+ V KGLN ++ IS K EPDWM RL A
Sbjct: 10 EEIDRLIS-DLKNGKALDYGFHDNIKPVYSTGKGLNSKVVEEISEIKKEPDWMRRIRLHA 68
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+W +ID+D++ YY++P + D+V E+ T+EKLG+P E
Sbjct: 69 LEIFNSKPVPTWGP-DLSSIDWDNMTYYSSPDDVKATN-WDEVPKEIKDTFEKLGVPEME 126
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ LAG A +DS V + K+E ++ GV+FM + A+ +PDLVK+Y + V
Sbjct: 127 RKYLAGS-------IAQYDSEGVYNSLKKEWEEKGVVFMDLDSALQRYPDLVKEYFAKAV 179
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P DN +AALN AV++ G+F+Y+P+GV M L TYFRIN + TGQFE T+++ADEGS V
Sbjct: 180 PPSDNKFAALNVAVWSGGAFLYVPRGVHIDMPLQTYFRINGEATGQFEHTIVVADEGSSV 239
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
YLEGCTAP ++ LHAA+VE + NA +Y++VQNW +YN TKR
Sbjct: 240 HYLEGCTAPVYSKDSLHAAIVEYYVMKNAHGRYTSVQNW-------SNSVYNMPTKRAWV 292
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ W GS +T YPS LRG + +IA+++ D+G K +H+A N
Sbjct: 293 -EENGNMEWVGGSLGSKVTMIYPSSYLRGRNATTSNLNIALASPGTVKDTGAKAIHMAPN 351
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S+I++K +S G + YRG V +++ A +++++ QCD+LLI + ++T+P+ E
Sbjct: 352 TSSKIIAKSVSLGDGKSIYRGLVRINKDALNAKSYVQCDALLINDESVSYTMPHDEIYEP 411
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ N HEAT KI E L Y RG+ E+ A +LIV GF+ +V++++PMEFAVE +L+
Sbjct: 412 TANFTHEATVGKIGTEELTYLRSRGLSEDEASSLIVLGFLDDVMKEIPMEFAVEMNRLVK 471
Query: 482 ISLE--GSVG 489
+ + G+VG
Sbjct: 472 LEMSKMGAVG 481
>gi|160913543|ref|ZP_02076234.1| hypothetical protein EUBDOL_00019 [Eubacterium dolichum DSM 3991]
gi|158434095|gb|EDP12384.1| hypothetical protein EUBDOL_00019 [Eubacterium dolichum DSM 3991]
Length = 466
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 196/475 (41%), Positives = 272/475 (57%), Gaps = 18/475 (3%)
Query: 16 VDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
++YKYGF + V KGL D I IS K EP WMLE+RL A+ + M +W
Sbjct: 9 QEEYKYGFHDKDTSVYNTGKGLTRDTIVEISTIKKEPQWMLEYRLKAFEAFEKMPIQTWG 68
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
++FDD YY P QS ++V + T++KLGIP E+E LAGV T
Sbjct: 69 P-DVTNLNFDDYTYYIKPSDKTE-QSWEEVPKTIKDTFDKLGIPEAEKEFLAGVTT---- 122
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
+DS +V EE+++ GVIF+ A+ ++PDL +KY +VP DN +AALNS
Sbjct: 123 ---QYDSEAVYHNMLEEVEEKGVIFLDTDTALKKYPDLFQKYFGKLVPYTDNKFAALNSC 179
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
V++ GSF+Y+PKGV+ L +YFRIN + GQFERTLII DEG+ + Y+EGCTAP +
Sbjct: 180 VWSGGSFIYVPKGVKLDKPLQSYFRINTERMGQFERTLIIVDEGADIHYVEGCTAPIYSK 239
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ LHAAVVE+ NA +YSTVQNW I N VTKR + W
Sbjct: 240 DSLHAAVVEIFVHKNARCRYSTVQNW-------SDNIINLVTKRAKVM-EHGSMEWIDGN 291
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS KYP+C+L + G SIA++ Q D+G KM+HLA T+S I+SK IS
Sbjct: 292 IGSLTNMKYPACILAEPYAKGTCISIAVAARNQIQDAGAKMIHLAPYTSSNIISKSISRL 351
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
YRG V + A ++++ +CD+L++ + TIP S N + +EHEAT S I
Sbjct: 352 GGEVNYRGIVKHGKHAVYAKSKVECDTLILDKQSRSDTIPTNSSDNMTSQIEHEATVSNI 411
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S+E LFY + RG+ A +IV GF+ ++LPME+AVE +L+ + + S+G
Sbjct: 412 SEEQLFYLMSRGLSRAQATEMIVMGFLEPFTRELPMEYAVELNQLMKLDMSDSIG 466
>gi|302335476|ref|YP_003800683.1| Iron-regulated ABC transporter membrane component SufB [Olsenella
uli DSM 7084]
gi|301319316|gb|ADK67803.1| Iron-regulated ABC transporter membrane component SufB [Olsenella
uli DSM 7084]
Length = 485
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 175/479 (36%), Positives = 277/479 (57%), Gaps = 21/479 (4%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD-PS 72
DVD+ Y F + + ++ GL +I+R ISAKK+EP WMLE RL A + ++ P+
Sbjct: 24 DVDRSLYDFVKSEEGYERYADGLTPEIVRAISAKKDEPAWMLEMRLRALDLFHELEMAPN 83
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
+ A+D D + Y +P++ + D V ++ T+E+LGIP E+E LAG
Sbjct: 84 YGP-DTSALDMDHISTYVSPRTKQA-RDWDSVPADIKDTFERLGIPEAERESLAG----- 136
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVPVGDNFYAA 190
V A +DS V +EE+ K GV++ I +A+ + +V +Y T++P D+ +AA
Sbjct: 137 --VGAQYDSEIVYHNMREEVAKQGVVYTTIEDALHDPQWEGVVHEYFGTLIPPRDHKFAA 194
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
L+ AV++ GSFVY+P GV L +YFR+N G GQFE TLII + GS + ++EGC+AP
Sbjct: 195 LHYAVWSGGSFVYVPAGVTLDYPLQSYFRLNASGAGQFEHTLIIVEPGSDLHFIEGCSAP 254
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ E LHA VEL D+A ++YST++NW ++N TKR G SK+ W
Sbjct: 255 KYYEANLHAGAVELFVKDHARLRYSTIENW-------SKNMFNLNTKR-ATIGADSKMEW 306
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS +++ YP+ +L G++S EF I + Q +D+G K++ +TT+ + +K
Sbjct: 307 VSGSFGSHVSYLYPTTILAGDRSSCEFTGITFAGATQDLDTGCKVILNGADTTASVDTKS 366
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS NT+R + V R A +R C SL++ + + T+P ++ +N + ++ HEAT
Sbjct: 367 ISKDGGINTFRSSIVVGRQANRARVNVSCQSLMLDDISRSDTVPAMDVRNPTASVGHEAT 426
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ISD+ + Y + RG E A ++VNGF V ++LP+E+AVE LI + +EG++G
Sbjct: 427 IGRISDDTVLYLMSRGCSEAEARTMVVNGFANPVSKELPLEYAVEMNNLIKLEMEGAIG 485
>gi|325679878|ref|ZP_08159447.1| FeS assembly protein SufB [Ruminococcus albus 8]
gi|324108316|gb|EGC02563.1| FeS assembly protein SufB [Ruminococcus albus 8]
Length = 470
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 177/488 (36%), Positives = 279/488 (57%), Gaps = 20/488 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
++E +V ID Y + +E + + D G+ DII+ IS +K + DWM E+RL +
Sbjct: 1 MKEEKTQVADIDRSLYDFRYEED-ERDYLGSGITADIIKEISDEKGDADWMREFRLKSME 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ W +D D++ Y KS + +DV ++ T+EKLGIP E+E
Sbjct: 60 IYNKTPMVEWGP-SIEGLDIDNIVTYIRTKSRMNTD-WNDVPDDIKNTFEKLGIPQAERE 117
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVV 181
LAG V A +DS V ++E+ +SGV++ + A+ + + ++++ + +V
Sbjct: 118 SLAG-------VGAQYDSELVYHNVRKEVAESGVVYTDLESAMHDERYAEMIRTHFMKLV 170
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P D+ +AAL+ AV++ GSFVY+PKGVR + L +YFR+N KG GQFE TLII +E SY+
Sbjct: 171 PPTDHKFAALHGAVWSGGSFVYVPKGVRLEIPLQSYFRLNAKGAGQFEHTLIILEEDSYL 230
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+AP+ E LHA VEL NA ++YST++NW +YN TKR
Sbjct: 231 HFIEGCSAPKYYEAGLHAGCVELYVGKNATLRYSTIENW-------SKNMYNLNTKRALV 283
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
KI W GS +++ YP +L G + EF I + Q +D+G K++H A +
Sbjct: 284 -DEGGKIEWVSGSFGSHVSYLYPMSILNGRGARAEFTGITFAGEGQNLDTGAKIVHNAPD 342
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S + +K IS +T+R V+V+ AA S++ C+SL++ + TIP ++ +
Sbjct: 343 TSSYMNTKSISKSGGISTFRSAVTVNEKAAGSKSAVSCESLMLDRISRSDTIPVMDIRTD 402
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
++ HEA +ISDE +FY + RG+ EE A A+IV GF V ++LP+E+AVE LI
Sbjct: 403 KADVGHEAKIGRISDETVFYLMSRGLSEEEAKAMIVRGFADNVSKELPLEYAVEMNNLIG 462
Query: 482 ISLEGSVG 489
+ ++GS+G
Sbjct: 463 LEMKGSIG 470
>gi|331002905|ref|ZP_08326418.1| FeS assembly protein SufB [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330413198|gb|EGG92572.1| FeS assembly protein SufB [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 468
Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 173/484 (35%), Positives = 279/484 (57%), Gaps = 19/484 (3%)
Query: 8 VDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+K D+++ Y F + K GL +++ IS +KN+P WM +RL A + +
Sbjct: 2 KEKTYVEDINRSMYDFRNEDKDSFKIAAGLTPELVSQISKEKNDPAWMQNFRLQALQIYN 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
M+ P W +D D++ Y P + + + +V ++ T+EKLGIP E++ LA
Sbjct: 62 QMEVPPWGP-SIDGLDIDNIVTYVRPNTHMKTK-WSEVPEDIKDTFEKLGIPQAERKSLA 119
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVGD 185
G V A +DS V ++E+ + GV++ + A+ E+ D+++K+ +V D
Sbjct: 120 G-------VGAQYDSELVYHNVRDEVSQMGVVYTDLESAMHSEYADMIQKHFMKLVKPND 172
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N KG GQFE TLII DEG+ + ++E
Sbjct: 173 HKFAALHGAVWSGGSFVYVPKGVHLDIPLQSYFRLNAKGAGQFEHTLIIVDEGADLHFIE 232
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP+ + LHA VEL NA ++YST++NW +YN TKR
Sbjct: 233 GCSAPKYNVANLHAGCVELFVGKNARLRYSTIENW-------SKNMYNLNTKRAVV-EEG 284
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+I W GS +++ YP +L+G+ S EF I + Q +D+G K++H A +T+S
Sbjct: 285 GRIEWVSGSFGSHVSYLYPMSILKGKGSRMEFTGITFAGAGQNLDTGAKVVHSAPDTSSF 344
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I +K IS G +T+R V V A HS+ C+SL++ + + T+P ++ + + ++
Sbjct: 345 INTKSISKGGGTSTFRSAVVVSEKAKHSKAAVSCESLMLDDISRSDTVPAMDIRCADADI 404
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEA +ISD+ +FY + RGI EE A A+IV+GF V ++LP+E+AVE LI + ++
Sbjct: 405 GHEARIGRISDDAVFYLMNRGISEEDAKAMIVSGFADNVSKELPLEYAVEMNNLIQLEMK 464
Query: 486 GSVG 489
GS+G
Sbjct: 465 GSIG 468
>gi|317057073|ref|YP_004105540.1| FeS assembly protein SufB [Ruminococcus albus 7]
gi|315449342|gb|ADU22906.1| FeS assembly protein SufB [Ruminococcus albus 7]
Length = 469
Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 179/486 (36%), Positives = 277/486 (56%), Gaps = 20/486 (4%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ +V ID Y + +E + + D G+ DII+ IS +KN+P+WM ++RL + +
Sbjct: 2 SSKTQVTDIDRSLYDFRYEED-ERDFFDSGITPDIIKEISEEKNDPEWMKDFRLRSLDIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
W +D D++ Y PKS + +DV ++ T+EKLGIP E+E L
Sbjct: 61 SRTPMVKWG-ASIEGLDVDNIVTYIRPKSRMNTD-WNDVPDDIKNTFEKLGIPQAERESL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVPV 183
AG V A +DS V +EE+ +SGV++ + A+ + + +++K + +VP
Sbjct: 119 AG-------VGAQYDSELVYHNVREEVAQSGVVYTDLESAMHDPKYAEIIKSHFMKLVPP 171
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ +AAL+ AV++ GSFVY+PK VR + L +YFR+N KG GQFE TLII +EG+Y+ +
Sbjct: 172 TDHKFAALHGAVWSGGSFVYVPKNVRLEIPLQSYFRLNAKGAGQFEHTLIILEEGAYLHF 231
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ E LHA VEL NA ++YST++NW +YN TKR
Sbjct: 232 IEGCSAPKYYEAGLHAGCVELYVGKNATLRYSTIENW-------SKNMYNLNTKRAIV-D 283
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+I W GS +++ YP +L G + EF I + Q +D+G K++H A +T+
Sbjct: 284 EGGRIEWVSGSFGSHVSYLYPMSILNGRGASAEFTGITFAGEGQDLDTGAKIVHNAPDTS 343
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S + +K IS +T+R V V+ A S++ C+SL++ + T+P I+ K C
Sbjct: 344 SYMNTKSISKSGGKSTFRSAVVVNEKAEGSKSSVNCESLMLDRISRSDTVPVIDVKTDKC 403
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
++ HEA +ISDE +FY RG+ EE A A+IV GF V ++LP+E+AVE LI +
Sbjct: 404 DVGHEAKIGRISDEAIFYLTSRGLSEEDARAMIVRGFADNVSKELPLEYAVEMNNLIGLE 463
Query: 484 LEGSVG 489
+ GSVG
Sbjct: 464 MHGSVG 469
>gi|300172561|ref|YP_003771726.1| FeS assembly protein SufB [Leuconostoc gasicomitatum LMG 18811]
gi|299886939|emb|CBL90907.1| FeS assembly protein SufB [Leuconostoc gasicomitatum LMG 18811]
Length = 476
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 200/488 (40%), Positives = 290/488 (59%), Gaps = 20/488 (4%)
Query: 5 RETVDKVRK-IDVDQYKY-GFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
+E +DK R I VD+ K GF+ + + V KGL+E IIR ISAKKNEP+WML +RL A
Sbjct: 6 QEAIDKTRAAIAVDKAKALGFQDDYKAVFSTGKGLDEGIIRQISAKKNEPEWMLNYRLQA 65
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y+ +L M SW I F+D+YYY P + + +DV EL T+E+LG+P E
Sbjct: 66 YQTYLNMPMHSWGP-DLSDIRFEDIYYYNKP-TNDKYRDWNDVPIELKETFERLGVPEAE 123
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ LAG A ++S V K+E K+G+IF A+ E+P+L+K+Y ++V
Sbjct: 124 RKWLAGSS-------AQYESEVVYHRMKDEFAKTGIIFTDTDTAVQEYPELMKEYFGSLV 176
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
+N AALN+AV++ G+F+Y+PKGV + +YFRIN + GQFERTLII DEG++V
Sbjct: 177 KPTNNKLAALNAAVWSGGTFIYVPKGVHVNTPIQSYFRINTENEGQFERTLIIVDEGAHV 236
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y+EGC+AP + LHAAVVE++ + +Y+T+QNW +Y+ TKR
Sbjct: 237 DYVEGCSAPMYSGDALHAAVVEVIVKKDGYCRYTTIQNW-------SNNVYSLETKRASA 289
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ + W GS T KYPS L GE + G SIA++ +DSG +M+H AKN
Sbjct: 290 H-ENATMEWVDGNFGSKTTMKYPSVYLNGEGAKGTMLSIAVAGEGVNLDSGAQMIHNAKN 348
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S I+SK I+ YRG V R + S +CD++L+ + A TIPY N
Sbjct: 349 TSSSIISKSIAHDGGKTDYRGTVKFGRESDGSFAHVECDTILVDDQSSADTIPYNTILNG 408
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ ++EHEA S++S+E L+Y + RGI E A +I+ GF+ ++LPME+AVE +L+
Sbjct: 409 NVSMEHEAKVSRVSEEQLYYLMTRGISAEKATEMIIMGFIEPFTKELPMEYAVELNRLMK 468
Query: 482 ISLEGSVG 489
+ GSVG
Sbjct: 469 FEMIGSVG 476
>gi|212697001|ref|ZP_03305129.1| hypothetical protein ANHYDRO_01566 [Anaerococcus hydrogenalis DSM
7454]
gi|212675999|gb|EEB35606.1| hypothetical protein ANHYDRO_01566 [Anaerococcus hydrogenalis DSM
7454]
Length = 437
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 162/453 (35%), Positives = 256/453 (56%), Gaps = 17/453 (3%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N++I+ +S KKNEP+WML+ RL + + ++PSW ++ D+ Y PK+
Sbjct: 2 NKEIVEELSRKKNEPEWMLKRRLQSLLIFEQTENPSWGP-DLSELNMADITTYVKPKTDK 60
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
D + E+ T+++LGIP EQE LAG V A +DS V + ++ L G
Sbjct: 61 KSN-WDALPEEIKDTFDRLGIPQAEQESLAG-------VGAQYDSEEVYHSIQKHLSDQG 112
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ EH ++V KY +P + YAAL+ AV++ GS +Y+PKGV + L +
Sbjct: 113 VIFTDFDTALKEHEEIVHKYFQRAIPPTLHKYAALHGAVWSGGSLIYVPKGVNVDIPLQS 172
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
Y+R+N G GQFE T+IIA+EG+ V ++EGC+AP+ + LHA VE+ +AE+++ST
Sbjct: 173 YYRLNAPGAGQFEHTMIIAEEGAKVHFIEGCSAPKYNVVNLHAGSVEIFVHKDAEVRFST 232
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
++NW +YN TKR ++ W GS ++ YP+ +L GE + E
Sbjct: 233 IENW-------SRNMYNLNTKRAIV-EENGQVEWISGSFGSKVSMLYPTTILNGEGARAE 284
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+ I ++ Q ID+G M+H A NT S ++K I+ G + R V + + A S++
Sbjct: 285 YTGITYASNGQYIDNGCSMIHNAPNTYSTALTKSITQGNGKSMTRSFVKIGKKAKGSKST 344
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
C++L++ + TIP ++ +N + HEA + + +FY + RGIPE A ++I
Sbjct: 345 VDCENLMLSRESKSDTIPTLDIRNDDVDCGHEAKIGSLDQKQIFYLMSRGIPENEAKSMI 404
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
V GF V ++LP+E+AVE LID+ LEG+ G
Sbjct: 405 VRGFAEPVAKELPLEYAVEMNNLIDMELEGANG 437
>gi|315652498|ref|ZP_07905482.1| FeS assembly protein SufB [Eubacterium saburreum DSM 3986]
gi|315485214|gb|EFU75612.1| FeS assembly protein SufB [Eubacterium saburreum DSM 3986]
Length = 469
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 171/484 (35%), Positives = 278/484 (57%), Gaps = 19/484 (3%)
Query: 8 VDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+K D+++ Y F + K GL +++ IS +KN+P WM +RL A + +
Sbjct: 3 KEKTYVEDINRSIYDFRNEDTDNFKIAAGLTPELVSQISKEKNDPAWMQNFRLQALQIYN 62
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
M+ P W +D D++ Y P + + + DV E+ T+EKLGIP E++ LA
Sbjct: 63 QMEVPPWGP-SIEGLDMDNIVTYVRPNTNMKTK-WSDVPEEIKDTFEKLGIPQAERKSLA 120
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVGD 185
G V A +DS V ++E+ + GV++ + A+ E D+++K+ +V D
Sbjct: 121 G-------VGAQYDSELVYHNVRDEVSQMGVVYTDLESAMHGEFADMIQKHFMKLVKPND 173
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N KG GQFE TLII +EG+ + ++E
Sbjct: 174 HKFAALHGAVWSGGSFVYVPKGVHLDIPLQSYFRLNAKGAGQFEHTLIIVEEGADLHFIE 233
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP+ + LHA VEL NA ++YST++NW +YN TKR
Sbjct: 234 GCSAPKYNVANLHAGCVELYVGKNARLRYSTIENW-------SKNMYNLNTKRAVV-EEG 285
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+I W GS +++ YP +L+G + EF I + Q +D+G+K++H A +T+S
Sbjct: 286 GRIEWVSGSFGSHVSYLYPMSILKGRGARMEFTGITFAGEGQNLDTGSKVVHAAPDTSSV 345
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I +K IS +T+R V V A +S++ C+SL++ + + T+P ++ + + ++
Sbjct: 346 ISTKSISKAGGISTFRNAVVVSEKAKNSKSSVSCESLMLDDISRSDTVPAMDIRCADADI 405
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEA +ISD+ +FY + RGI EE A A+IV+GF V ++LP+E+AVE LI + ++
Sbjct: 406 GHEARIGRISDDAVFYLMNRGISEEDARAMIVSGFADNVSKELPLEYAVEMNNLIQLEMK 465
Query: 486 GSVG 489
GS+G
Sbjct: 466 GSIG 469
>gi|163814490|ref|ZP_02205879.1| hypothetical protein COPEUT_00641 [Coprococcus eutactus ATCC 27759]
gi|158450125|gb|EDP27120.1| hypothetical protein COPEUT_00641 [Coprococcus eutactus ATCC 27759]
gi|295094612|emb|CBK83703.1| Iron-regulated ABC transporter membrane component SufB [Coprococcus
sp. ART55/1]
Length = 468
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 167/485 (34%), Positives = 273/485 (56%), Gaps = 19/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ V ID + Y + + + K GL +I+ +S +K++P WM +RL + + +
Sbjct: 2 KEKTYVEDIDRNIYDFKY-DDKDAYKLKAGLTPEIVEQLSKEKHDPAWMQNFRLESLQIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M+ P W +D D++ Y P + + D+V ++ T+E+LGIP E++ L
Sbjct: 61 NNMQVPDWGP-SIEGLDIDNIVTYVRPNTKMKGS-WDEVPEDIKDTFERLGIPQAERKSL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVG 184
AG V A +DS V ++E+ GV++ + A+ E+ D+V+K+ +V
Sbjct: 119 AG-------VGAQYDSELVYHNVRQEVADMGVVYTDMESALTGEYADMVQKHFMKLVTPH 171
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+P GV+ + L +YFR+N G GQFE TLII DEG+ + ++
Sbjct: 172 DHKFAALHGAVWSGGSFVYVPPGVKVEIPLQSYFRLNAAGAGQFEHTLIIVDEGADLHFI 231
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL NA+++YST++NW +YN TKR
Sbjct: 232 EGCSAPKYNVANLHAGCVELFVGKNAKLRYSTIENW-------SKNMYNLNTKRARV-EE 283
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS +++ YP +L+G+ + EF + + Q +D+G K++H A +T+S
Sbjct: 284 GGTIEWVSGSFGSHVSYLYPMSVLKGKGARMEFTGVTFAGKGQNLDTGAKVVHAAPDTSS 343
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I +K IS +T+R V V + A +S+ C SL++ + + TIP ++ + N
Sbjct: 344 YINTKSISKDGGISTFRSSVVVTKEAENSKAAVSCQSLMLDSISRSDTIPAMDIRTKKVN 403
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA ISDE +FY + RG+ EE A A IV+GF V ++LP+E+A+E LI + +
Sbjct: 404 VGHEAQIGSISDEAVFYLMSRGMSEEDARACIVSGFADNVSKELPLEYALEMNNLIRLEM 463
Query: 485 EGSVG 489
+GS+G
Sbjct: 464 KGSIG 468
>gi|328955722|ref|YP_004373055.1| Iron-regulated ABC transporter membrane component SufB
[Coriobacterium glomerans PW2]
gi|328456046|gb|AEB07240.1| Iron-regulated ABC transporter membrane component SufB
[Coriobacterium glomerans PW2]
Length = 470
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 158/479 (32%), Positives = 260/479 (54%), Gaps = 22/479 (4%)
Query: 15 DVDQYKYGFETNIQ--VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
D+D+ Y T+ + D+ GL I+ IS++K+EP WML++RL + + M +P+
Sbjct: 10 DIDRSLYD-VTDAEEGFDRLDAGLTPKIVTEISSRKDEPAWMLDFRLKSLDIYQRMPNPT 68
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W +D D++ Y P + + V ++ T+E+LGIP E+ LAG
Sbjct: 69 WGPA-LDGLDMDNIVTYVRPNTEQHAD-WESVPDDIKNTFERLGIPEAERSYLAG----- 121
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVPVGDNFYAA 190
V A +DS V ++ +K G+++ I EA+ + L+ + T++P D+ +AA
Sbjct: 122 --VGAQYDSELVYHNMQDAAEKLGIVYSGIEEALHDARWEPLIHEKFMTLIPPTDHRFAA 179
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
L+ AV++ GSFVY+P+ + L +YFR+N KG GQFE TLII ++ + + ++EGC+AP
Sbjct: 180 LHGAVWSGGSFVYVPRETKLDFPLQSYFRLNAKGAGQFEHTLIIVEDDADLHFIEGCSAP 239
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ + LHA VEL A ++YST++NW +YN TKR +I W
Sbjct: 240 KYNVANLHAGAVELFVGARAHLRYSTIENW-------SKNMYNLNTKRARV-EEGGEIEW 291
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS + + YP +L G S F I + Q +D+G K + A +T++ + +K
Sbjct: 292 ISGSFGSHVGYLYPMSVLAGRGSRSSFTGITFAGCGQNLDTGCKTVLAAPDTSASVETKS 351
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS G +T+R + V A + C SL++ + + TIP ++ + + ++ HEAT
Sbjct: 352 ISKGGGISTFRSSLVVTEAAEGAVASVSCQSLMLDDESRSDTIPAMDVRAKNVDIGHEAT 411
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I D+ +FY + GI E A +IVNGF V ++LP+E+AVE LI + +EG++G
Sbjct: 412 IGRIGDDKVFYLMSHGISEAEARTMIVNGFANPVSKELPLEYAVEMNNLIKLEMEGAIG 470
>gi|257784206|ref|YP_003179423.1| FeS assembly protein SufB [Atopobium parvulum DSM 20469]
gi|257472713|gb|ACV50832.1| FeS assembly protein SufB [Atopobium parvulum DSM 20469]
Length = 472
Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats.
Identities = 175/487 (35%), Positives = 273/487 (56%), Gaps = 19/487 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ DVD+ Y F + + ++ GL +I+R IS KK EP+WML+ RL A
Sbjct: 2 SEKKRSEVADVDRSLYDFTKSEEGYERYDDGLTPEIVRAISEKKEEPEWMLQMRLSALET 61
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ + + +D + + Y +PK+ S DDV ++ T+++LGIP E E
Sbjct: 62 YHQRQMATNWGPSIAGLDLNHISTYVSPKTQQA-NSWDDVPEDIRDTFDRLGIPQAEAES 120
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVP 182
LAG V A +DS V +EE+ + GVI+ I +A+ + +VK+Y ++P
Sbjct: 121 LAG-------VGAQYDSEIVYHNMREEVAEQGVIYTTIEDALHDSQWEPVVKEYFGKLIP 173
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D+ +AAL+ AV++ GSFVY+PK V L +YFR+N +G GQFE TLII +EG+ +
Sbjct: 174 PSDHKFAALHYAVWSGGSFVYVPKNVTLDYPLQSYFRLNAQGAGQFEHTLIIVEEGADLH 233
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ LHA VEL D A ++YST++NW +YN TKR
Sbjct: 234 FIEGCSAPKYYAANLHAGAVELFVKDGARLRYSTIENW-------SKNMYNLNTKRAII- 285
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +K+ W GS +++ YPS ++ G+ S EF I + Q +D+G K++ N
Sbjct: 286 GSNAKMEWVSGSFGSHVSYLYPSTIMNGDSSNCEFTGITFAGATQDLDTGCKVIINGSNN 345
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
++ + +K IS NT+R V+V R A ++R C SL++ N + TIP ++ +NS+
Sbjct: 346 SANVDTKSISKDGGVNTFRSAVTVGRKAENARVAFSCQSLMLDNISRSDTIPEMDVRNST 405
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+ HEAT +ISD+ + Y + RG E A ++VNGF V ++LPME+AVE LI +
Sbjct: 406 AQIGHEATIGRISDDTVLYLMSRGCSEAEARTMVVNGFANPVSKELPMEYAVEMNNLIKL 465
Query: 483 SLEGSVG 489
+EG++G
Sbjct: 466 EMEGAIG 472
>gi|328948369|ref|YP_004365706.1| FeS assembly protein SufB [Treponema succinifaciens DSM 2489]
gi|328448693|gb|AEB14409.1| FeS assembly protein SufB [Treponema succinifaciens DSM 2489]
Length = 471
Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats.
Identities = 178/488 (36%), Positives = 280/488 (57%), Gaps = 20/488 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E KV ID Y + +E ++ K GL++ I++ +S +K++P+WM E+RL +
Sbjct: 1 MGEEKTKVSDIDRSLYDFRYEESDRDFYKIRAGLDDSIVQKLSEEKSDPEWMKEFRLKSL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + +P W +D + Y PK+ + + DV ++ T+EKLGIP E+
Sbjct: 61 HLFNEINEPDWGP-DIRDLDIQKIVTYVKPKTEMAAK-WADVPKDIKDTFEKLGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC--EHPDLVKKYLSTV 180
E LAG V A +DS V +E+ + GVI+ A+ E +VK+Y +
Sbjct: 119 ESLAG-------VGAQYDSEVVYHNVIKEVAEQGVIYTDFESALKSEEWGGMVKEYFMHL 171
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP D+ +AAL+ AV++ GSFVY+PK V+ + L +YFR+N G GQFE TLII DEG+
Sbjct: 172 VPPSDHKFAALHGAVWSGGSFVYVPKNVKVKIPLQSYFRLNAAGAGQFEHTLIIVDEGAD 231
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+ ++EGC+AP+ + LHA VEL NA ++YST++NW +YN TKR
Sbjct: 232 LHFIEGCSAPKYNVANLHAGCVELYVKKNARLRYSTIENW-------SKNMYNLNTKRAI 284
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
++ W GS I++ YP+ +L+G+ S EF I + Q +D+G KM+H+ K
Sbjct: 285 V-EENGRMEWVSGSFGSHISYLYPTTILKGDNSSVEFTGITFAGKGQNLDTGAKMVHIGK 343
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
NT++ I +K IS G TYR + V++GA +S+ C SL++ + + T+P I
Sbjct: 344 NTSTVINTKSISKGGGACTYRSSIVVNKGAKNSKASVDCSSLMLDDESRSDTVPAINVMT 403
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
C++ HEA +IS++ +FY + RGI EE A A+IV+GF V ++LP+E+AVE LI
Sbjct: 404 DDCDIGHEAKIGRISNKAIFYLMSRGISEEDARAMIVSGFANPVSKELPLEYAVEMNNLI 463
Query: 481 DISLEGSV 488
+ ++GS+
Sbjct: 464 QLEMKGSM 471
>gi|291542547|emb|CBL15657.1| Iron-regulated ABC transporter membrane component SufB
[Ruminococcus bromii L2-63]
Length = 468
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 167/477 (35%), Positives = 274/477 (57%), Gaps = 19/477 (3%)
Query: 15 DVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DVD+ Y + + GL+ I+ IS +KN+P WM +RL + + + +K P+W
Sbjct: 9 DVDRSVYDIKDEENDAYRIKSGLDASIVEKISKEKNDPMWMQNFRLQSLQIYNELKVPNW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
++ D++ Y P + + + +V ++ T+E+LGIP E++ LAG
Sbjct: 69 GPP-IDGLNMDNIATYVRPNTRMTAK-WSEVPEDIKNTFERLGIPQAERKSLAG------ 120
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVGDNFYAALN 192
V A +DS V +EE+ GV++ + A+ E+ D+VKKY +V D+ +AAL+
Sbjct: 121 -VGAQYDSELVYHNVREEVASQGVVYTDMESALKGEYADMVKKYFMKLVRPNDHKFAALH 179
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
AV++ GSFVY+P GV + L +YFR+N G GQFE TLII DEG+ + ++EGC+AP+
Sbjct: 180 GAVWSGGSFVYVPPGVSVEIPLQSYFRLNAPGAGQFEHTLIIVDEGADLHFIEGCSAPKY 239
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+ LHA VEL NA ++YST++NW +YN TKR + W
Sbjct: 240 NIANLHAGCVELFVKKNARLRYSTIENW-------SKNMYNLNTKRALV-EDGGTMEWVS 291
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
GS +++ YP +L+G++S EF I + Q +D+G K++H+ K T+S + ++ IS
Sbjct: 292 GSFGSHVSYLYPMTILKGDRSRMEFTGITFAGKGQNLDTGAKVVHIGKETSSFMNTRSIS 351
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
+T+R V V++ A ++++ C SL++ + + TIP ++ + ++ HEA
Sbjct: 352 KDGGISTFRSSVVVNKSAENAKSAVSCQSLMLDSKSRSDTIPVMDIRTPHADIGHEAKIG 411
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ISDE +FY + RG+ EE A A+IV+GF V ++LP+E+AVE LI + ++GS+G
Sbjct: 412 RISDEAVFYLMSRGLSEEDARAMIVSGFADNVSKELPLEYAVEMNNLIQLEMKGSIG 468
>gi|217076393|ref|YP_002334109.1| FeS assembly protein SufB [Thermosipho africanus TCF52B]
gi|217036246|gb|ACJ74768.1| FeS assembly protein SufB [Thermosipho africanus TCF52B]
Length = 463
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 172/478 (35%), Positives = 271/478 (56%), Gaps = 18/478 (3%)
Query: 13 KIDVDQYKYGFETNIQVD-KAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
I ++ ++ + NI+ + K+ GL II IS K EP WM E RL + + DP
Sbjct: 3 DIKQNEDRFNYIANIEPEYKSLPGLTPKIIEEISEIKGEPKWMRELRLKSLEIFQKWHDP 62
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
+ + +D + + Y PK+ ++V E+ + ++KLGIP E++ AG
Sbjct: 63 RFG-VDISELDLNKIIPYIKPKANKQTS-WEEVPEEIKKAFDKLGIPEAERKYFAG---- 116
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
V A FDS V K+EL+ GVIFM + A+ E+PDLVK+Y +VP D+ +AAL
Sbjct: 117 ---VGAQFDSEIVYQNIKKELESLGVIFMDMESAVREYPDLVKEYFMKLVPAHDHKFAAL 173
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+ A+++ G+F+Y+PKGV+ PM L YF ++ G Q E T+I+ADEGS V+++EGC+AP+
Sbjct: 174 HGAIWSGGTFLYVPKGVKVPMPLQAYFLMSNPGMSQLEHTVIVADEGSEVTFIEGCSAPR 233
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ LH +VE+ +A++KY T+QNW YN TKR +SW
Sbjct: 234 YNVINLHTGMVEIYVKKDAKVKYMTIQNW-------SKNTYNLNTKRSIV-EENGVMSWV 285
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS T YP +L+G+ + E I + Q +D+G+K++HLA T+S I ++ I
Sbjct: 286 SGSLGSMKTMLYPMTILKGKGAKAESLGITYAGPGQHMDTGSKVVHLAPYTSSTIDARSI 345
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S G YRG + + + A S++ QC +L++ N + T+P IE NS ++ HEA
Sbjct: 346 SVGGGWAFYRGLLRIAQDAKKSKSHVQCTALMLDNKSKSDTVPLIEVYNSDSDVGHEARI 405
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I DE +FY + RG+ E A ++IV GF+ ++ LP E+A+E +LI++ +E S+G
Sbjct: 406 GRIKDEQIFYLMTRGLSETEAKSMIVKGFIEPIVSSLPFEYALELNRLIEMEIESSIG 463
>gi|218133325|ref|ZP_03462129.1| hypothetical protein BACPEC_01190 [Bacteroides pectinophilus ATCC
43243]
gi|217992198|gb|EEC58202.1| hypothetical protein BACPEC_01190 [Bacteroides pectinophilus ATCC
43243]
Length = 468
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 170/485 (35%), Positives = 270/485 (55%), Gaps = 19/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ V ID Y + + GL +I+ IS +KN+P+WM E+RL + +
Sbjct: 2 KEKSHVDDIDRSVYDIR-DKEHDAYRIEAGLTPEIVDKISKEKNDPEWMHEFRLKSLEIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
MK P W +D + + Y P + + DV ++ T+E+LGIP E++ L
Sbjct: 61 NGMKIPDWGP-SIEGLDMEHIATYVRPNTKMQGD-WKDVPQDIKDTFERLGIPQAERKSL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVG 184
AG V A +DS V K+E+ GVI+ + A+ E+ D+V +Y +V
Sbjct: 119 AG-------VGAQYDSELVYHNVKDEVAAQGVIYTDMESALKGEYADMVHEYFMKLVTPR 171
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N KG GQFE TLII DEG+ + ++
Sbjct: 172 DHKFAALHGAVWSGGSFVYVPKGVDVSIPLQSYFRLNAKGAGQFEHTLIIVDEGASLHFI 231
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL +A+++YST++NW +YN TKR
Sbjct: 232 EGCSAPKYNVANLHAGCVELFVKKDAKLRYSTIENW-------SKNMYNLNTKRALV-EE 283
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS +++ YP +L+G S EF + + Q +D+G K++H A +T+S
Sbjct: 284 GGTIEWVSGSFGSHVSYLYPMSILKGRGSKMEFTGVTFAGEGQNLDTGAKVIHAAPDTSS 343
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ ++ IS +T+R V V + A+++++ C SL++ + + TIP ++ +
Sbjct: 344 YMNTRSISKSGGISTFRSSVVVQKNASNAKSAVSCQSLMLDSESRSDTIPAMDIRTKDAA 403
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA ISD+ +FY + RG+ EE A ALIV+GF V ++LP+E+AVE LI + +
Sbjct: 404 VGHEAKIGSISDDAVFYLMSRGMSEEDARALIVSGFADNVSKELPLEYAVEMNNLIRLEM 463
Query: 485 EGSVG 489
+GS+G
Sbjct: 464 KGSIG 468
>gi|284931545|gb|ADC31483.1| SufB-like protein [Mycoplasma gallisepticum str. F]
Length = 466
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 196/479 (40%), Positives = 287/479 (59%), Gaps = 18/479 (3%)
Query: 12 RKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+KI +Y+YGF + + + KG++ +I++ IS KNEP+WML+ RL A+ ++ M +
Sbjct: 5 KKILNKKYQYGFYDKDTSIFETTKGISREIVKKISKLKNEPEWMLKIRLEAFDTFMKMAN 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
PSW ID+D+ Y+ + D V ++ T++KLGI E + L GV T
Sbjct: 65 PSWGP-DLSFIDYDNAVMYSKAVNNPQYS-WDQVPKKIKNTFKKLGILEAEAKFLNGVST 122
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+DS +V + ++EL ++GVIF A+ ++P+LVKKY ++VP DN +AA
Sbjct: 123 -------QYDSQAVYHSIEKELAENGVIFTDTDTAVQKYPELVKKYFGSIVPTNDNKFAA 175
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LN+A ++ GSFVY+PKGV L YFRIN + GQFERT+II +EG+ Y+EGCTAP
Sbjct: 176 LNTAFWSGGSFVYVPKGVEIKKPLQAYFRINGRRVGQFERTIIILEEGAKCHYVEGCTAP 235
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
E+ LH AVVE+ N+ +Y+T+QNW + N VTKR +K+SW
Sbjct: 236 VYSEDNLHCAVVEVFLHKNSVGRYTTIQNW-------SDNVLNLVTKRSIVY-ENAKMSW 287
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
G+ I KYPS +L GE + + SIA++N D+G KM+HLA +T SRIVSK
Sbjct: 288 IDGNIGARINMKYPSSILAGEYASSDCISIAVANKGIIQDAGAKMIHLAPHTKSRIVSKS 347
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+S + YRG V + + A +S + +CD+LLI N T+P +N +LEHEA
Sbjct: 348 VSFNGGDTCYRGLVKIGKDAHYSSSKVECDTLLIDNISRTDTLPTEIIENKYSSLEHEAK 407
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S IS+E LFY + +GIP++ A LIV GF+ ++LPME+A+E +LI + +EGSVG
Sbjct: 408 VSNISEEQLFYMMSKGIPKDVAENLIVLGFIEPFTKELPMEYAIELNRLITMDMEGSVG 466
>gi|303232855|ref|ZP_07319539.1| FeS assembly protein SufB [Atopobium vaginae PB189-T1-4]
gi|302481045|gb|EFL44121.1| FeS assembly protein SufB [Atopobium vaginae PB189-T1-4]
Length = 509
Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 172/479 (35%), Positives = 275/479 (57%), Gaps = 21/479 (4%)
Query: 15 DVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD-PS 72
DVD+ Y F + ++ GL DI+R ISAKK EP+WML+ RL A + + P+
Sbjct: 48 DVDRSLYDFVMSEDGYERYADGLTPDIVRSISAKKEEPEWMLKLRLDALDIFHHIDMAPN 107
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W +D D + Y +P + +S DDV ++ +T+E+LGIP E++ LAG
Sbjct: 108 WGP-DCGGLDMDHISTYVSPNTKQA-RSWDDVPKDIKQTFERLGIPEAERKSLAG----- 160
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVPVGDNFYAA 190
V A +DS V ++++ K GV++ I +A+ + +V KY + ++P+ D+ +AA
Sbjct: 161 --VGAQYDSEIVYHNMRDDVAKQGVVYTTIEDALHDPTWEPVVHKYFAKLIPLKDHKFAA 218
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
L+ AV++ GSFVY+P+GV L +YFR+N GQFE TLII ++G+ + ++EGC+AP
Sbjct: 219 LHYAVWSGGSFVYVPRGVSLSYPLQSYFRLNASSAGQFEHTLIIVEDGADLHFIEGCSAP 278
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ E LHA VEL DNA ++YST++NW +YN TKR G S++ W
Sbjct: 279 KYYEANLHAGAVELFVGDNARLRYSTIENW-------SKNMYNLNTKRALI-GENSRMEW 330
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS +++ YP+ +L+G S EF I + Q +D+G K++ NT + + +K
Sbjct: 331 VSGSFGSHVSYLYPTTILQGAGSVCEFTGITFAGATQNLDTGCKIIMNGANTKTSVDTKS 390
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS NT+R + V + A H+ C SL++ + + TIP + + ++ ++ HEAT
Sbjct: 391 ISKDGGINTFRSSMVVGKHAHHATASVSCQSLMLDDISRSDTIPANDVRCATASVGHEAT 450
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ISD+ + Y + RG E A ++VNGF V ++LP+E+AVE LI + +EG++G
Sbjct: 451 IGRISDDTILYLMSRGCSEAEARTMVVNGFANPVSKELPLEYAVEMNNLIKLEMEGAIG 509
>gi|31544485|ref|NP_853063.1| SufB-like protein [Mycoplasma gallisepticum str. R(low)]
gi|31541330|gb|AAP56631.1| SufB-like protein [Mycoplasma gallisepticum str. R(low)]
gi|284930541|gb|ADC30480.1| SufB-like protein [Mycoplasma gallisepticum str. R(high)]
Length = 466
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 194/479 (40%), Positives = 285/479 (59%), Gaps = 18/479 (3%)
Query: 12 RKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+KI +Y+YGF + + + KG++ +I++ IS KNEP+WML+ RL A+ ++ M +
Sbjct: 5 KKILNKKYQYGFYDKDTSIFETTKGISREIVKKISKLKNEPEWMLKIRLEAFDTFMKMPN 64
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
PSW ID+D+ Y+ D V ++ T++KLGI E + L GV T
Sbjct: 65 PSWGP-DLSFIDYDNAVMYSKAVDNPQYS-WDQVPKKIKNTFKKLGILEAEAKFLNGVST 122
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+DS +V + ++EL ++GVIF A+ ++P+LVKKY ++V DN +AA
Sbjct: 123 -------QYDSQAVYHSIEKELAENGVIFTDTDTAVQKYPELVKKYFGSIVSTNDNKFAA 175
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LN+A ++ GSFVY+PKGV L YFRIN + GQFERT+II +EG+ Y+EGCTAP
Sbjct: 176 LNTAFWSGGSFVYVPKGVEIRKPLQAYFRINGRRVGQFERTIIILEEGAKCHYVEGCTAP 235
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
E+ LH AVVE+ N+ +Y+T+QNW + N VTKR +K+SW
Sbjct: 236 VYSEDNLHCAVVEVFLHKNSVGRYTTIQNW-------SDNVLNLVTKRSIVY-ENAKMSW 287
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
G+ I KYPS +L GE + + SIA++N D+G KM+HLA +T SRIVSK
Sbjct: 288 IDGNIGARINMKYPSSILAGEYASSDCISIAVANKGIIQDAGAKMIHLAPHTKSRIVSKS 347
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+S + YRG V + + A +S + +CD+LLI N T+P +N +LEHEA
Sbjct: 348 VSFNGGDTCYRGLVKIGKDAHYSSSKVECDTLLIDNISRTDTLPTEIIENKYSSLEHEAK 407
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
S IS+E LFY + +G+P++ A LIV GF+ ++LPME+A+E +LI + +EGSVG
Sbjct: 408 VSNISEEQLFYMMSKGVPKDVAENLIVLGFIEPFTKELPMEYAIELNRLITMDMEGSVG 466
>gi|196230993|ref|ZP_03129853.1| FeS assembly protein SufB [Chthoniobacter flavus Ellin428]
gi|196224823|gb|EDY19333.1| FeS assembly protein SufB [Chthoniobacter flavus Ellin428]
Length = 470
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 207/483 (42%), Positives = 300/483 (62%), Gaps = 18/483 (3%)
Query: 9 DKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+++ + D+D+ + F ++Q A GL I +I K EPDW+ +WR A +L+
Sbjct: 4 EELNQFDIDRTRGDFRYDVQYQYDAGTGLTHQTIDYIVDAKGEPDWIRDWRHKALDVFLS 63
Query: 68 MKDPS-WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
P+ WA I FD++ YY A +S +DV ++ RT+E+LGIP +E++ LA
Sbjct: 64 KPMPTHWASKDLENIVFDNIRYYLAGGQKP-SRSWEDVPEDMKRTFERLGIPEQERKFLA 122
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G V+A FDS +V + K+ + + GVIF+ ++ + HP++ +K+ V+P GDN
Sbjct: 123 G-------VEAQFDSEAVYSNIKKAVGEQGVIFVGSTDGLKNHPEIFRKWFGKVIPTGDN 175
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++ALNSAVF+ GSF+Y+P GV+ L YFRIN + GQFERTLIIADEGS V Y+EG
Sbjct: 176 KFSALNSAVFSGGSFIYVPPGVKVKHPLQAYFRINAENFGQFERTLIIADEGSEVMYMEG 235
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CTAP+ + LH+AVVELVAL A+I+Y TVQNW P ++N VTKR +
Sbjct: 236 CTAPKFETATLHSAVVELVALKGAKIQYVTVQNWSP-------NVFNLVTKRAIAH-EEA 287
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
++ W GS +T KYP +L+G ++ GE SIA++N Q D+G KM+H A TTS I
Sbjct: 288 EVKWIDCNIGSRLTMKYPGVVLKGRKARGEVISIALANDGQHQDTGAKMIHAADETTSNI 347
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
VSK IS G TYRG V V + +N T+CD+LLI + T P I + + +
Sbjct: 348 VSKSISIGKGRATYRGLVHVPKHLKGCKNNTECDALLINSTARTDTYPAITVRGTGNACQ 407
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
HEA+ S+IS E +FY QRG+ E A++L VNGFV +++++ PME++VE ++LID+ +EG
Sbjct: 408 HEASVSQISAEQIFYMQQRGLTEAQAMSLSVNGFVNDLVRQFPMEYSVELKRLIDLEMEG 467
Query: 487 SVG 489
SVG
Sbjct: 468 SVG 470
>gi|303234942|ref|ZP_07321567.1| FeS assembly protein SufB [Finegoldia magna BVS033A4]
gi|302494060|gb|EFL53841.1| FeS assembly protein SufB [Finegoldia magna BVS033A4]
Length = 470
Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 177/493 (35%), Positives = 276/493 (55%), Gaps = 27/493 (5%)
Query: 1 MVAVRETVDKVRKIDVDQY----KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M ++T +V ++D Y K+ F + +GL +I+R IS +K EP WMLE
Sbjct: 1 MAPTKKT--QVDEMDRGIYDIKNKFTFRKKTE-----EGLTPEIVRQISKEKKEPQWMLE 53
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
RL A + +DP W +D D + Y P + + ++V E+ T++KLG
Sbjct: 54 KRLEALEIFYNSEDPEWGP-DLSVVDMDKVTTYIRPDADMSSD-WNEVPDEIRDTFDKLG 111
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I E+E++ V A +DS V ++ L GVI+ A+ EH D+VKKY
Sbjct: 112 IQEAEKEMM------LSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALKEHEDIVKKY 165
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ + + YAAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE T+II +
Sbjct: 166 FAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVE 225
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ SY ++EGC+AP+ + +HA VE+ +N+ +++ST++NW +YN +
Sbjct: 226 DDSYCHFIEGCSAPKYNALNVHAGAVEIFVGENSTLRFSTIENW-------SRNMYNLNS 278
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR KI W GSA++ YPS +L+GE + E+ I+ + Q +D+G M+
Sbjct: 279 KRAII-EKNGKIEWVSGSFGSAVSMLYPSSVLKGEGASSEYTGISFAGRDQNLDTGAVMI 337
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A +TTS + SK IS + YRG V + A S++ C+SL++ N + TIP +
Sbjct: 338 HAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVV 397
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ N +L HEA+ +I D+ +FY + RGIPEE A +++V GF + ++LPME+AVE
Sbjct: 398 KIANKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEM 457
Query: 477 QKLIDISLEGSVG 489
LI++ LEGS+G
Sbjct: 458 NNLINLELEGSIG 470
>gi|169824167|ref|YP_001691778.1| putative iron-regulated ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
gi|302380866|ref|ZP_07269329.1| FeS assembly protein SufB [Finegoldia magna ACS-171-V-Col3]
gi|167830972|dbj|BAG07888.1| putative iron-regulated ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
gi|302311361|gb|EFK93379.1| FeS assembly protein SufB [Finegoldia magna ACS-171-V-Col3]
Length = 470
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 176/493 (35%), Positives = 276/493 (55%), Gaps = 27/493 (5%)
Query: 1 MVAVRETVDKVRKIDVDQY----KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M ++T +V ++D Y K+ F + +GL +I+R IS +K EP WMLE
Sbjct: 1 MAPTKKT--QVDEMDRGIYDIKNKFTFRKKTE-----EGLTPEIVRQISKEKKEPQWMLE 53
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
RL A + +DP W +D D + Y P + + ++V E+ T++KLG
Sbjct: 54 KRLEALEIFFNSEDPEWGP-DLSVVDMDKVTTYIRPDADMSSD-WNEVPDEIRDTFDKLG 111
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I E+E++ V A +DS V ++ L GVI+ A+ EH D+VKKY
Sbjct: 112 IQEAEKEMM------LSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALKEHEDIVKKY 165
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ + + YAAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE T+II +
Sbjct: 166 FAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVE 225
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ SY ++EGC+AP+ + +HA VE+ +N+ +++ST++NW +YN +
Sbjct: 226 DDSYCHFIEGCSAPKYNALNVHAGAVEIFVGENSTLRFSTIENW-------SRNMYNLNS 278
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR K+ W GSA++ YPS +L+GE + E+ I+ + Q +D+G M+
Sbjct: 279 KRAII-EKNGKVEWVSGSFGSAVSMLYPSSVLKGEGASSEYTGISFAGRDQNLDTGAVMI 337
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A +TTS + SK IS + YRG V + A S++ C+SL++ N + TIP +
Sbjct: 338 HAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVV 397
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ N +L HEA+ +I D+ +FY + RGIPEE A +++V GF + ++LPME+AVE
Sbjct: 398 KIANKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEM 457
Query: 477 QKLIDISLEGSVG 489
LI++ LEGS+G
Sbjct: 458 NNLINLELEGSIG 470
>gi|297587552|ref|ZP_06946196.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Finegoldia magna ATCC 53516]
gi|297574241|gb|EFH92961.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Finegoldia magna ATCC 53516]
Length = 470
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 176/493 (35%), Positives = 276/493 (55%), Gaps = 27/493 (5%)
Query: 1 MVAVRETVDKVRKIDVDQY----KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLE 56
M ++T +V ++D Y K+ F + +GL +I+R IS +KNEP WMLE
Sbjct: 1 MAPKKKT--QVDEMDRGIYDIKNKFTFRRKTE-----EGLTPEIVRQISEEKNEPQWMLE 53
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
RL A + +DP W +D + + Y P + ++V E+ T++KLG
Sbjct: 54 KRLEALEIFYNSEDPEWGP-DLSVVDMNKVTTYIRPDADRSSD-WNEVPDEIRDTFDKLG 111
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I E+E++ V A +DS V ++ L GVI+ A+ EH D+VK+Y
Sbjct: 112 IQEAEKEMM------LSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALREHEDIVKQY 165
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ + + YAAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE T+II +
Sbjct: 166 FAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVE 225
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ SY ++EGC+AP+ + +HA VE+ +NA +++ST++NW +YN +
Sbjct: 226 DDSYCHFIEGCSAPKYNALNVHAGAVEIFVGENATLRFSTIENW-------SRNMYNLNS 278
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KR K+ W GSA++ YPS +L+GE + E+ I+ + Q +D+G M+
Sbjct: 279 KRAII-EKNGKVEWVSGSFGSAVSMLYPSSVLKGEGASSEYTGISFAGRDQNLDTGAVMI 337
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A +TTS + SK IS + YRG V + A S++ C+SL++ N + TIP +
Sbjct: 338 HAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVV 397
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ N +L HEA+ +I D+ +FY + RGIPEE A +++V GF + ++LPME+AVE
Sbjct: 398 KIGNKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEM 457
Query: 477 QKLIDISLEGSVG 489
LI++ LEGS+G
Sbjct: 458 NNLINLELEGSIG 470
>gi|290890639|ref|ZP_06553710.1| hypothetical protein AWRIB429_1100 [Oenococcus oeni AWRIB429]
gi|290479767|gb|EFD88420.1| hypothetical protein AWRIB429_1100 [Oenococcus oeni AWRIB429]
Length = 462
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 174/468 (37%), Positives = 265/468 (56%), Gaps = 18/468 (3%)
Query: 23 FETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI 81
F + + GL+E ++R ISA K+EPDWML++RL + + M P + +
Sbjct: 12 FHDQFKPIYSTGIGLDEKVVREISAAKHEPDWMLDYRLKSLAIYNKMPMPDFGP-DLSGL 70
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
+ D L+Y+ + +DV + T+++LG+P E++ LAG A ++S
Sbjct: 71 ELDRLHYFQRATDK-KYRDWNDVPATIKETFDRLGVPEAERQYLAGSS-------AQYES 122
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
V K++ K G+IF A+ ++P+L KK+ +V N ++ALN AV++ G+F
Sbjct: 123 EVVYHNIKDQFAKQGIIFTDTDTALQKYPELFKKWFGKLVSPATNKFSALNGAVWSGGAF 182
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+Y+PKGVR + +YFRINE TGQFERTLII DEG+ +Y+EGCTAP+ D + LHAAV
Sbjct: 183 IYVPKGVRVKTPMQSYFRINEINTGQFERTLIIVDEGASANYVEGCTAPRYDSDSLHAAV 242
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
VE+ +A +Y+T+QNW +Y+ TK+ + + W GS IT
Sbjct: 243 VEVNVQRDAYCRYTTIQNW-------STNVYSMETKKASA-AENATMEWVDGNLGSKITM 294
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
KYPS L G + G SIA++ D+G +M+H A NT+S I+SK IS YR
Sbjct: 295 KYPSVYLNGPGARGTMLSIAVAGAHMDQDNGARMIHNAPNTSSSIISKSISKDGGAVDYR 354
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G V + S+ +CD++++ + + TIP E N ++EHEA SKIS+E L+Y
Sbjct: 355 GTVRFGEHSQGSKAHVECDTIIMDDKSSSDTIPINEIHNGQVSMEHEARVSKISEEQLYY 414
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ RGI E A +I+ GF+ ++LPME+AVE +LI+ + GS+G
Sbjct: 415 LMSRGISEATATQMIIMGFIEPFTKQLPMEYAVELNRLIEFQMAGSIG 462
>gi|116491131|ref|YP_810675.1| Fe-S cluster assembly ABC-type transport system, permease component
[Oenococcus oeni PSU-1]
gi|116091856|gb|ABJ57010.1| Iron-regulated ABC transporter membrane component SufB [Oenococcus
oeni PSU-1]
Length = 462
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 175/468 (37%), Positives = 266/468 (56%), Gaps = 18/468 (3%)
Query: 23 FETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI 81
F + + GL+E ++R ISA K+EPDWML++RL + + M P + +
Sbjct: 12 FHDQFKPIYSTGIGLDEKVVREISAAKHEPDWMLDYRLKSLAIYNKMPMPDFGP-DLSGL 70
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
+ D L+Y+ + +DV + T+++LG+P E++ LAG A ++S
Sbjct: 71 ELDRLHYFQRATDK-KYRDWNDVPATIKETFDRLGVPEAERQYLAGSS-------AQYES 122
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
V K++ K G+IF A+ ++P+L KK+ +V N ++ALN AV++ G+F
Sbjct: 123 EVVYHNIKDQFAKQGIIFTDTDTALQKYPELFKKWFGKLVSPATNKFSALNGAVWSGGAF 182
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+Y+PKGVR + +YFRINE TGQFERTLII DEG+ V+Y+EGCTAP+ D + LHAAV
Sbjct: 183 IYVPKGVRVKTPMQSYFRINEINTGQFERTLIIVDEGASVNYVEGCTAPRYDSDSLHAAV 242
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
VE+ +A +Y+T+QNW +Y+ TK+ + + W GS IT
Sbjct: 243 VEVNVQRDAYCRYTTIQNW-------STNVYSMETKKASA-AENATMEWVDGNLGSKITM 294
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
KYPS L G + G SIA++ D+G +M+H A NT+S I+SK IS YR
Sbjct: 295 KYPSVYLNGPGARGTMLSIAVAGAHMDQDNGARMIHNAPNTSSSIISKSISKNGGAVDYR 354
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G V + S+ +CD++++ + + TIP E N ++EHEA SKIS+E L+Y
Sbjct: 355 GTVRFGEHSQGSKAHVECDTIIMDDKSSSDTIPINEIHNGQVSMEHEARVSKISEEQLYY 414
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ RGI E A +I+ GF+ ++LPME+AVE +LI+ + GS+G
Sbjct: 415 LMSRGISEATATQMIIMGFIEPFTKQLPMEYAVELNRLIEFQMAGSIG 462
>gi|150019960|ref|YP_001305314.1| FeS assembly protein SufB [Thermosipho melanesiensis BI429]
gi|149792481|gb|ABR29929.1| FeS assembly protein SufB [Thermosipho melanesiensis BI429]
Length = 463
Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 168/478 (35%), Positives = 268/478 (56%), Gaps = 18/478 (3%)
Query: 13 KIDVDQYKYGFETNIQVDKAP-KGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+ ++ K+ + NI+ + GL II IS K EP WM E RL + + +P
Sbjct: 3 DVKSNEEKFNYIANIEPEYVSLPGLTPKIIEEISDIKEEPKWMREHRLKSLEIFQRWHNP 62
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
+ + +D + Y PK+ + D+V E+ + ++KLGIP E++ AG
Sbjct: 63 RFG-VDISGLDLSKIIPYIKPKARKN-TTWDEVPEEIKKAFDKLGIPEAERKYFAG---- 116
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
V A FDS V KEEL+ G+IF+ + A+ ++PDLV++Y +VP D+ +AAL
Sbjct: 117 ---VGAQFDSEIVYQNIKEELESLGIIFLDMESAVKQYPDLVREYFMRLVPTHDHKFAAL 173
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+ A+++ G+F+Y+PKGV+ PM L YF ++ G Q E T+I+ADEGS V ++EGC+AP+
Sbjct: 174 HGAIWSGGTFLYVPKGVKVPMPLQAYFLMSNPGMSQLEHTIIVADEGSEVIFIEGCSAPR 233
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ LH +VE+ +A++KY T+QNW YN TKR +SW
Sbjct: 234 YNVINLHTGMVEIYVKKHAKVKYMTIQNW-------SKNTYNLNTKRSIV-EEDGVMSWV 285
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS T YP +L+G+ + E I + Q +D+G+K++HLA T+S I ++ I
Sbjct: 286 SGSLGSMKTMLYPMTILKGKGAKAESLGITYAGPGQHMDTGSKVVHLAPYTSSTIDARSI 345
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S G YRG + V + A S++ QC +L++ N + T+P IE N+ ++ HEA
Sbjct: 346 SVGGGWAFYRGLLKVAKDAKKSKSHVQCTALMLDNYSKSDTVPIIEVYNNDADIGHEARI 405
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+I DE +FY + RG+ E A ++IV GF+ ++ LP E+AVE +LI++ +E ++G
Sbjct: 406 GRIKDEQIFYLMSRGLNEAEAKSMIVKGFIEPIVSSLPFEYAVELNRLIEMEIESTIG 463
>gi|160894916|ref|ZP_02075690.1| hypothetical protein CLOL250_02466 [Clostridium sp. L2-50]
gi|156863347|gb|EDO56778.1| hypothetical protein CLOL250_02466 [Clostridium sp. L2-50]
Length = 468
Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 166/485 (34%), Positives = 273/485 (56%), Gaps = 19/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
+ V ID + Y + + K GL +I+ +S +K++P WM +RL + + +
Sbjct: 2 KEKTYVEDIDRNIYDFK-DDEKDAYKIKAGLTPEIVEQLSKEKHDPAWMQTFRLESLQIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M+ P W ++ D++ Y P + + + DV ++ T+E+LGIP E++ L
Sbjct: 61 NNMEVPDWGP-SIEGLNMDNIVTYVRPNTNMKAK-WSDVPEDIKNTFERLGIPQAERKSL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVG 184
AG V A +DS V ++E+ + GV++ + A+ E+ D+V+K+ +V
Sbjct: 119 AG-------VGAQYDSELVYHNVRQEVAEKGVVYTDMESALNGEYADMVRKHFMKLVRPN 171
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII DEG+ + ++
Sbjct: 172 DHKFAALHGAVWSGGSFVYVPKGVSVEIPLQSYFRLNAPGAGQFEHTLIIVDEGADLHFI 231
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL NA+++YST++NW +YN TKR
Sbjct: 232 EGCSAPKYNVANLHAGCVELFVGKNAKLRYSTIENW-------SKNMYNLNTKRAVV-EE 283
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
I W GS +++ YP +L+G+ + EF I + Q +D+G K++H A +T+S
Sbjct: 284 GGTIEWVSGSFGSHVSYLYPMSILKGKGAKMEFTGITFAGKGQNLDTGAKVVHSAPDTSS 343
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I ++ IS +T+R V V + A +S+ C SL++ + + TIP ++ + N
Sbjct: 344 YINTRSISKDGGISTFRSSVVVAKEAENSKAAVSCQSLMLDSISRSDTIPAMDIRTRKAN 403
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEA ISD+ +FY + RG+ EE A A IV+GF V ++LP+E+A+E LI + +
Sbjct: 404 VGHEAQIGSISDDAVFYLMSRGMSEEDARACIVSGFADNVSKELPLEYALEMNNLIRLEM 463
Query: 485 EGSVG 489
+GS+G
Sbjct: 464 KGSIG 468
>gi|304386161|ref|ZP_07368494.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Pediococcus acidilactici DSM 20284]
gi|304327518|gb|EFL94745.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Pediococcus acidilactici DSM 20284]
Length = 468
Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 180/471 (38%), Positives = 273/471 (57%), Gaps = 18/471 (3%)
Query: 20 KYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
++G ++Q V G+NE+ I+ IS K+EP WML+ RL AY+ + +M PS+
Sbjct: 15 EWGPMDDVQPVFSTGVGINEETIQAISRAKHEPQWMLDLRLQAYQIYQSMPMPSFGP-DL 73
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
ID +++ Y+ + ++ +DV E+ T+E++G+P E++ LAG A
Sbjct: 74 SEIDLNEIKYFQRATDHIA-RNWEDVPDEIKTTFERIGVPEAERKYLAGSA-------AQ 125
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
++S +V K++L+ G+IFM A+ +HP+LV++Y ++ DN +AALN+AV++
Sbjct: 126 YESEAVYHNLKQDLESQGIIFMDTDSALKQHPELVRQYFGKLIAASDNKFAALNTAVWSG 185
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G+F+Y+PK V + + +YFRIN TGQFERTLII DEG V+Y+EGCTAP E+ LH
Sbjct: 186 GTFLYVPKNVHADVPIQSYFRINAGRTGQFERTLIIVDEGGSVNYVEGCTAPNYAEDSLH 245
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVE+ +A +Y+T+QNW +Y+ TKR S + W GS
Sbjct: 246 AAVVEVFVKKDAYCRYTTIQNW-------STNVYSLETKRAQAEA-NSTMEWVDGNLGSK 297
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+T KYPS L G + G SIA + D+G KM+HLA NT S IVSK I
Sbjct: 298 VTMKYPSIYLTGAGATGSMLSIAAAGANMHQDTGAKMIHLAPNTHSTIVSKAICHNGGRA 357
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
YRG + + A +++ +CD++L+ + + T P + + S +EHEA SKIS+
Sbjct: 358 DYRGLIKYTKAAKRAKSHVECDTILMDQDSASDTFPVNDIETSDGTIEHEAHVSKISEAQ 417
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
L+Y RG+ E A LI+ GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 418 LYYLKSRGLDEATASQLIIMGFLEPFTKQLPMEYAVELDRLIKFQMEGSIG 468
>gi|116492291|ref|YP_804026.1| Fe-S cluster assembly ABC-type transport system, permease component
[Pediococcus pentosaceus ATCC 25745]
gi|116102441|gb|ABJ67584.1| Iron-regulated ABC transporter membrane component SufB [Pediococcus
pentosaceus ATCC 25745]
Length = 469
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 174/461 (37%), Positives = 267/461 (57%), Gaps = 17/461 (3%)
Query: 29 VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYY 88
V G++ + I+ IS KNEP WMLE RL AY+ +L + P + ID D + Y
Sbjct: 26 VFSTGVGIDAETIKQISQAKNEPAWMLEIRLAAYQTYLDLPMPKFGP-DLNGIDLDQIKY 84
Query: 89 YAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTF 148
+ + + +DV ++ T+E++G+P E++ LAG A ++S ++ +
Sbjct: 85 FQRATDHIA-RDWEDVPNDIKATFERIGVPEAERKYLAGSA-------AQYESEAIYSNL 136
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGV 208
K++L+ G+IFM A+ +HPDLV++Y T+VP DN +AALN+AV++ G+F+Y+PK V
Sbjct: 137 KKDLESQGIIFMDTDSALQKHPDLVRQYFGTLVPADDNKFAALNTAVWSGGTFLYVPKNV 196
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
+ + +YFRIN TGQFERTLII ++G V+Y+EGCTAP E+ LHAAVVE+
Sbjct: 197 HADIPIQSYFRINAGRTGQFERTLIIVEKGGSVNYVEGCTAPNYSEDSLHAAVVEVFVKK 256
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
+ +Y+T+QNW +Y+ TKR G + + W GS +T KYPS L
Sbjct: 257 DGYCRYTTIQNW-------STNVYSLETKRAQA-GTNATMEWIDGNLGSKVTMKYPSIYL 308
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
G+ + G SIA + D+G KM+H+A +T S IVSK I YRG + +
Sbjct: 309 VGQGATGSMLSIAAAGANMHQDTGAKMIHMAPHTHSTIVSKAICHNGGRADYRGLIKYTK 368
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
A +++ +CD++L+ + + T P + + S +EHEA SKI+++ L+Y RG+
Sbjct: 369 AATKAKSHVECDTILMDPDSASDTFPVNDIETSDGTIEHEAHVSKIAEDQLYYMQSRGLD 428
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E A LIV GF+ ++LPME+AVE +LI +E S+G
Sbjct: 429 EATASQLIVMGFLEPFTKQLPMEYAVELDRLIKFQMEDSIG 469
>gi|308234380|ref|ZP_07665117.1| Iron-regulated ABC transporter membrane component SufB [Atopobium
vaginae DSM 15829]
gi|328944196|ref|ZP_08241660.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
gi|327491115|gb|EGF22890.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
Length = 518
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 169/478 (35%), Positives = 271/478 (56%), Gaps = 19/478 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+D+ Y F + + ++ GL +I+ IS KK+EP WML+ RL A + +K
Sbjct: 57 DIDRSLYDFVMSEEGYERYADGLTPEIVTSISRKKDEPAWMLQLRLEALETYHELKMADN 116
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D + + Y +P++ +S DDV ++ +T+E+LGIP E++ LAG
Sbjct: 117 WGPDCSGLDLNHISTYVSPRTKQA-RSWDDVPKDIKQTFERLGIPDAERKSLAG------ 169
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKKYLSTVVPVGDNFYAAL 191
V A +DS V ++++ K GV++ I +A+ + +VKKY S ++P+ D+ +AAL
Sbjct: 170 -VGAQYDSEIVYHNMRDDVAKQGVVYTTIEDALHDPRWEPMVKKYFSKLIPLKDHKFAAL 228
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+ AV++ GSFVY+PKGV L +YFR+N GQFE TLII D+ + + ++EGC+AP+
Sbjct: 229 HYAVWSGGSFVYVPKGVTLSYPLQSYFRLNASSAGQFEHTLIIVDDEADLHFIEGCSAPK 288
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
E LHA VEL +NA ++YST++NW +YN TKR G S++ W
Sbjct: 289 YYEANLHAGAVELFVGNNARMRYSTIENW-------SKNMYNLNTKRALV-GENSRMEWI 340
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
GS +++ YPS +L+G S EF I + Q +D+G K++ + + + +K I
Sbjct: 341 SGSFGSHVSYLYPSTILQGNHSTCEFTGITFAGATQNLDTGCKIVMNGQGCKASVDTKSI 400
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S NT+R + V + A HS C SL++ + + TIP + ++ ++ HEAT
Sbjct: 401 SKDGGINTFRSSMIVGKSAHHSVATVSCQSLMLDDISRSDTIPANNVRCATASVGHEATI 460
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ISD+ + Y + RG E A ++VNGF V ++LP+E+AVE LI I +EG++G
Sbjct: 461 GRISDDTILYLMSRGCSEAEARTMVVNGFASPVSKELPLEYAVEMNNLIKIEMEGAIG 518
>gi|182415976|ref|YP_001821042.1| FeS assembly protein SufB [Opitutus terrae PB90-1]
gi|177843190|gb|ACB77442.1| FeS assembly protein SufB [Opitutus terrae PB90-1]
Length = 486
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 212/492 (43%), Positives = 303/492 (61%), Gaps = 20/492 (4%)
Query: 2 VAVRETVDKVRK--IDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
E V + +DQ F N+ A GLNE+ IR+IS+ K E W+LE+R
Sbjct: 11 PVADEAASAVENPVLGIDQTAGNFSYNVDYAYDAGTGLNENTIRYISSVKKEAPWLLEFR 70
Query: 59 LLAYRRWLTMKDPS-WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
L A + +L+ P+ WA IDF + YY A ++ D+V ++ +T+E+LGI
Sbjct: 71 LNALKTFLSKPLPTHWATKDLENIDFAKIRYYLAQGQKPK-RTWDEVPDDIKKTFERLGI 129
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P +E++ LAG V+A FDS + + KE + K GVIF+ ++ + EHP+L +K+
Sbjct: 130 PEQERKFLAG-------VEAQFDSEAAYSNIKEIVAKQGVIFVNSTQGLREHPELFRKFF 182
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
V+P GDN ++ALNSAVF+ GSF+Y+P GV+ L YFRIN + GQFERTLIIADE
Sbjct: 183 GKVIPTGDNKFSALNSAVFSGGSFIYVPPGVKVAQPLQAYFRINAENFGQFERTLIIADE 242
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V Y+EGCTAP+ + LH+AVVELVAL A+I+Y TVQNW P ++N VTK
Sbjct: 243 GSEVVYMEGCTAPKFSTSTLHSAVVELVALKGAKIQYITVQNWAP-------NVFNLVTK 295
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
RG ++I W GS +T KYP +L+G ++ GE SIA++N Q D+G KM+H
Sbjct: 296 RGVAH-EEAEIKWIDCNIGSRLTMKYPGVVLKGRKARGEVISIALANDGQHQDTGAKMIH 354
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A TTS ++SK IS G TYRG+V + + +N T+CD+LLI N T P I
Sbjct: 355 AADETTSNVISKSISVGQGRATYRGQVHIPKRLKGCKNNTECDALLINTNSRTDTYPAIT 414
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ +HEA+ SK+++E +FY QRG+ E A++L VNGF+ ++ ++ PME++VE +
Sbjct: 415 VRGDRNATQHEASVSKVNEEMIFYMQQRGLTEGQAMSLAVNGFINDLARQFPMEYSVELK 474
Query: 478 KLIDISLEGSVG 489
+LID+ +EGSVG
Sbjct: 475 RLIDLEMEGSVG 486
>gi|270290639|ref|ZP_06196863.1| FeS assembly protein SufB [Pediococcus acidilactici 7_4]
gi|270280699|gb|EFA26533.1| FeS assembly protein SufB [Pediococcus acidilactici 7_4]
Length = 469
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 180/471 (38%), Positives = 272/471 (57%), Gaps = 18/471 (3%)
Query: 20 KYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY 78
++G ++Q V G+NE+ I+ IS K+EP WML+ RL AY+ + +M PS+
Sbjct: 16 EWGPMDDVQPVFSTGVGINEETIQAISRAKHEPQWMLDLRLQAYQIYQSMPMPSFGP-DL 74
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
ID +++ Y+ + ++ +DV E+ T+E++G+P E++ LAG A
Sbjct: 75 SEIDLNEIKYFQRATDHIA-RNWEDVPDEIKTTFERIGVPEAERKYLAGSA-------AQ 126
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
++S +V K++L+ G+IFM A+ +HP+LV++Y ++ DN +AALN+AV++
Sbjct: 127 YESEAVYHNLKQDLESQGIIFMDTDSALKQHPELVRQYFGKLIAASDNKFAALNTAVWSG 186
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G+F+Y+PK V + + +YFRIN TGQFERTLII DEG V+Y+EGCTAP E+ LH
Sbjct: 187 GTFLYVPKNVHADVPIQSYFRINAGRTGQFERTLIIVDEGGSVNYVEGCTAPNYAEDSLH 246
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AAVVE+ +A Y+T+QNW +Y+ TKR S + W GS
Sbjct: 247 AAVVEVFVKKDACCCYTTIQNW-------STNVYSLETKRAQAEA-NSTMEWVDGNLGSK 298
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+T KYPS L G + G SIA + D+G KM+HLA NT S IVSK I
Sbjct: 299 VTMKYPSIYLTGAGATGSMLSIAAAGANMHQDTGAKMIHLAPNTHSTIVSKAICHNGGRA 358
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
YRG + + A +++ +CD++L+ + + T P + + S +EHEA SKIS+
Sbjct: 359 DYRGLIKYTKAAKRAKSHVECDTILMDQDSASDTFPVNDIETSDGTIEHEAHVSKISEAQ 418
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
L+Y RG+ E A LI+ GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 419 LYYLKSRGLDEATASQLIIMGFLEPFTKQLPMEYAVELDRLIKFQMEGSIG 469
>gi|293377861|ref|ZP_06624042.1| FeS assembly protein SufB [Enterococcus faecium PC4.1]
gi|292643408|gb|EFF61537.1| FeS assembly protein SufB [Enterococcus faecium PC4.1]
Length = 452
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 183/453 (40%), Positives = 266/453 (58%), Gaps = 18/453 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V +GL E++IR +S K EP+WMLE+RL + + M +W
Sbjct: 5 ELEEYKFGFHDDVEPVFSTGEGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
I+FD + YY P + +DV ++ T+EK+GIP E+ LAG
Sbjct: 65 GP-DLSDINFDAIKYYQKPSDKPA-RDWEDVPEKIKDTFEKIGIPEAERAYLAGAS---- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K+E +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 119 ---AQYESEVVYHNMKDEFEKLGIVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNS 175
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ + Y+EGCTAP
Sbjct: 176 AVWSGGTFIYVPKGVKVDVPLQTYFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYS 235
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 236 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 287
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 288 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 347
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 348 DGGEVNYRGQVTFAKNSAGSISHIECDTIIMDEWSKSDTIPFNEIHNSQVSLEHEAKVSK 407
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
IS+E L+Y + RG+ E A +IV GFV +
Sbjct: 408 ISEEQLYYLMSRGLTESEATEMIVMGFVEPFTK 440
>gi|154249939|ref|YP_001410764.1| FeS assembly protein SufB [Fervidobacterium nodosum Rt17-B1]
gi|154153875|gb|ABS61107.1| FeS assembly protein SufB [Fervidobacterium nodosum Rt17-B1]
Length = 469
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 185/492 (37%), Positives = 278/492 (56%), Gaps = 26/492 (5%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQV---DKAPKGLNEDIIRFISAKKNEPDWMLEW 57
M + E + ++++ K FE + V K P GL+ ++ IS K+EP WM E
Sbjct: 1 MSNLNELLYELKQ------KENFELKVNVPAALKLPAGLDRKLVYEISKAKDEPQWMTEH 54
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL ++ + +P W R +D + Y P + ++V E+ +E+LGI
Sbjct: 55 RLKSFEIFEKWHEPDWGVERDE-LDLSKIVPYVKPNAKKTTS-WEEVPSEIKEAFERLGI 112
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P E++ LAG V A FDS + KEELKK GVIF+ I A+ E+PDLVK+Y
Sbjct: 113 PEAERKYLAG-------VGAQFDSEMIYKNIKEELKKLGVIFIDIETAVKEYPDLVKEYF 165
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+VP DN YAAL+ A+++ G+F+Y+PKGV+ P+ L +YF G GQFE T+IIADE
Sbjct: 166 MKLVPPTDNKYAALHGALWSGGTFLYVPKGVKVPLPLQSYFLFGNPGGGQFEHTVIIADE 225
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS V+Y+EGCTAP+ D LH VE+ A++KY T+QNW ++N K
Sbjct: 226 GSEVTYIEGCTAPKYDVVNLHIGTVEVYVKKGAKLKYLTMQNW-------SKNMFNLEIK 278
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
R + ++W GS T YP+ +L+G+ S E SI+ + Q ID+G+K++H
Sbjct: 279 RAIAY-DDAVMTWVSGSFGSYKTMVYPATILKGDNSVSENISISFAGPGQHIDTGSKVIH 337
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ KNT S + ++ IS G + YRG + + A S+ C L+I N + T+P IE
Sbjct: 338 IGKNTRSTVDARSISIGGGWSFYRGLLKIMENAKGSKASVSCTGLMIDNKSKSDTVPIIE 397
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
N+ ++ HEA +I DE +FY + RG+ E A LIV GF++ V+Q+LP E+A+E
Sbjct: 398 VHNTDSDIGHEAKIGRIKDEQIFYLMSRGLSELEAKGLIVKGFIQPVVQELPFEYAIELN 457
Query: 478 KLIDISLEGSVG 489
+L+D+ +E S+G
Sbjct: 458 RLVDMEIESSIG 469
>gi|315925584|ref|ZP_07921794.1| FeS assembly protein SufB [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621125|gb|EFV01096.1| FeS assembly protein SufB [Pseudoramibacter alactolyticus ATCC
23263]
Length = 469
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 164/484 (33%), Positives = 268/484 (55%), Gaps = 18/484 (3%)
Query: 8 VDKVRKIDVDQYKYGFETN-IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
+K DV++ Y + K GL I+ IS +KN+P+WM ++RL + +
Sbjct: 2 KEKTYVEDVNRSIYDIKDEETDFYKVDNGLTPAIVEEISKEKNDPEWMRDFRLKSLDIYN 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
+ ++ DD+ Y PK+ + + DV ++ T+E+LGIP E++ LA
Sbjct: 62 RKQMADNWGPPIDGLNMDDIVTYVRPKTQMSAK-WSDVPEDIKNTFERLGIPQAERQSLA 120
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVGD 185
G V A +DS V ++E+ + GV++ I A+ + +++ + ++P GD
Sbjct: 121 G-------VGAQYDSELVYHNVRKEVAEQGVVYTDIESALRGPYAQMIQDHFMKLIPPGD 173
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII DEG+ + ++E
Sbjct: 174 HKFAALHGAVWSGGSFVYVPKGVSVEIPLQSYFRLNAPGAGQFEHTLIIVDEGADLHFIE 233
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+AP+ + LHA VEL NA+++YST++NW +YN TKR
Sbjct: 234 GCSAPKYNVANLHAGAVELFVGKNAKLRYSTIENW-------SKNMYNLNTKRAKIEA-G 285
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ W GS +++ YP +L G + E+ I + Q +D+G K++H A TTS
Sbjct: 286 GVMEWVSGSFGSHVSYLYPMTILDGADARMEYTGITFAGHDQNLDTGMKVVHNAPRTTSA 345
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ +K IS +TYR V V A +++ C SL++ + + TIP ++ + ++
Sbjct: 346 VNAKSISKDGGISTYRSSVVVTNKAKEAKSSVSCASLMLDDISRSDTIPAMDVRTQDADI 405
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
HEA +ISD+ +FY + RGI EE A A+IV+GF V ++LP+E+AVE LI + ++
Sbjct: 406 GHEAKIGRISDDAVFYLMSRGISEEDARAMIVSGFADNVSKELPLEYAVEMNNLIRLEMK 465
Query: 486 GSVG 489
G++G
Sbjct: 466 GAIG 469
>gi|241895312|ref|ZP_04782608.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
gi|241871286|gb|EER75037.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
Length = 469
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 185/469 (39%), Positives = 264/469 (56%), Gaps = 18/469 (3%)
Query: 22 GFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPA 80
G I V G++ED IR IS K+EPDWML RL AY+ +L M P +
Sbjct: 18 GAVDEIDPVFSTGVGISEDTIRKISGAKHEPDWMLALRLKAYQIYLKMPLPKFGP-DLSQ 76
Query: 81 IDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
I+ D + Y+ V + DV + T+E++G+P E+E LAG A ++
Sbjct: 77 INLDHIKYFQRATDHVA-RQWADVPDTIKETFERIGVPEAEREYLAGSA-------AQYE 128
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
S +V + K +L+ G+IFM A+ EHP+LV++Y T++ DN +AALN+AV++ G+
Sbjct: 129 SEAVYSNLKHDLESQGIIFMDTDSALREHPNLVQQYFGTLISASDNKFAALNTAVWSGGT 188
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
F+Y+PKGV + + +YFRIN TGQFERTLII DEG V+Y+EGCTAP E+ LHAA
Sbjct: 189 FLYVPKGVHADVPIQSYFRINAGRTGQFERTLIIVDEGGSVNYVEGCTAPNYSEDSLHAA 248
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
VVE+ +Y+T+QNW +Y+ TKR + + W GS +T
Sbjct: 249 VVEVFVKQGGYCRYTTIQNW-------STNVYSLETKRARAEAA-ASMEWVDGNLGSKVT 300
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
KYPS L G + G SIA + D+G KM+H+A +T S I+SK I Y
Sbjct: 301 MKYPSIYLVGRGATGSMLSIAAAGKDMHQDTGAKMIHMAPDTHSTIISKAICHDGGRADY 360
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG V + A ++ + +CD++L+ N + T P + S +EHEA SK+S+E L+
Sbjct: 361 RGLVKYTKRATNAHSHLECDTILMDNQSSSDTFPVNDIATSDGTIEHEARVSKVSEEKLY 420
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
Y RG+ EE A LIV GF+ ++LPME+AVE +LI + GSVG
Sbjct: 421 YLESRGLDEETATQLIVMGFLDPFTKQLPMEYAVELNRLIKFQMVGSVG 469
>gi|329121303|ref|ZP_08249930.1| FeS assembly protein SufB [Dialister micraerophilus DSM 19965]
gi|327470237|gb|EGF15700.1| FeS assembly protein SufB [Dialister micraerophilus DSM 19965]
Length = 470
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 175/476 (36%), Positives = 274/476 (57%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV++ Y + ++ K+ GL EDIIR IS+KKNEP+WML+ RL A + + + P W
Sbjct: 12 DVNRSIYDIKDKVEFSYKSDSGLTEDIIREISSKKNEPEWMLQKRLEALKIYDELDIPPW 71
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D +Y Y PK+ + + +D+ + T+++LGIP E++ LAG
Sbjct: 72 MP-DISELDMDHIYTYIRPKTDMKAR-WEDLPQNIRDTFDRLGIPEAEKKNLAG------ 123
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V ++EL++ GV+++ + ++P++VKKY ++ + +AAL+
Sbjct: 124 -VGAQYDSEVVYHNVQKELEQQGVVYVDFETGVNKYPEIVKKYFGKLITPRYHKFAALHY 182
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+P+GV M L +YFR+N G GQFE TLII ++G+ ++EGC+AP+ +
Sbjct: 183 AVWSGGSFVYVPEGVHVKMPLQSYFRLNAPGAGQFEHTLIIIEKGASCHFIEGCSAPRYN 242
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LHA VEL A ++YST++NW +YN TK+ S I W
Sbjct: 243 VANLHAGAVELFVKKGATLRYSTIENW-------SKNMYNLNTKKAIVEEDGSMI-WVSG 294
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS ++ YP +L+G++S EF I+ + Q +D+G K+ K+T+ I SK IS
Sbjct: 295 SFGSHVSCLYPDTILQGDRSKCEFTGISFAGKGQFLDTGCKVESFGKDTSLNINSKSISK 354
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G YRG V + A ++ C+SL++ + + TIP I +N +L HEA +
Sbjct: 355 GGGTCLYRGVVHIGPRAKGTKGTISCESLMLDSLSRSDTIPDIIIENDDIDLGHEAKIGR 414
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
ISD ++Y + RGI EE A A++V GF + + LP+E+AVE +LID+ EGS+G
Sbjct: 415 ISDGDIYYLMSRGISEEEAKAMLVRGFAEPISKALPLEYAVEMNRLIDLEFEGSIG 470
>gi|238921897|ref|YP_002935411.1| Fe-S cluster assembly protein SufB [Eubacterium eligens ATCC 27750]
gi|238873569|gb|ACR73277.1| Fe-S cluster assembly protein SufB [Eubacterium eligens ATCC 27750]
Length = 468
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 171/485 (35%), Positives = 273/485 (56%), Gaps = 19/485 (3%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
E V I+ Y + +GL +I+ IS +K++P WM E+RL + +
Sbjct: 2 EEKTFVDDINRSVYDIK-NEENDSYRIKQGLTPEIVEKISEEKHDPAWMREFRLKSLEIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M+ P W ++ D++ Y + + DV E+ T+++LGIP E+E L
Sbjct: 61 NNMQVPDWGP-SIDGLNMDNIATYVRANTNMKGD-WKDVPEEIKDTFDRLGIPKAERESL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVG 184
AG V A +DS V ++E+ GV++ + A+ E+ D+V ++ ++
Sbjct: 119 AG-------VGAQYDSELVYHNVRKEVADQGVVYTDMESALTGEYADMVHEHFMKLITPQ 171
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII DEG+ + ++
Sbjct: 172 DHKFAALHGAVWSGGSFVYVPKGVNLEIPLQSYFRLNAAGAGQFEHTLIIVDEGASLHFI 231
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + LHA VEL NA+++YST++NW +YN TKR
Sbjct: 232 EGCSAPKYNVANLHAGAVELFVAKNAKLRYSTIENW-------SKNMYNLNTKRATV-AE 283
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
KI W GS +++ YP +L GE+S EF I + Q +D+G K++H A TTS
Sbjct: 284 GGKIEWVSGSFGSHVSYLYPMSILNGERSSCEFTGITFAGAGQNLDTGMKVVHNAPATTS 343
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ +K IS G +T+R V++ A S++ C SL+I + + TIP ++ + + +
Sbjct: 344 VVSTKSISKGGGISTFRSAVTMTTKAKKSKSSVSCQSLMIDDISRSDTIPAMDIRVNDAD 403
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT +ISD+ +FY + RGIPE+ A A+IV+GF V ++LP+E+A+E LI + +
Sbjct: 404 VGHEATIGRISDDAVFYLMSRGIPEDDARAMIVSGFADNVSKELPLEYAMEMNNLIKLEM 463
Query: 485 EGSVG 489
+GS+G
Sbjct: 464 KGSIG 468
>gi|313892666|ref|ZP_07826251.1| FeS assembly protein SufB [Dialister microaerophilus UPII 345-E]
gi|313118908|gb|EFR42115.1| FeS assembly protein SufB [Dialister microaerophilus UPII 345-E]
Length = 470
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 174/476 (36%), Positives = 274/476 (57%), Gaps = 18/476 (3%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
DV++ Y + ++ K+ GL EDIIR IS+KKNEP+WML+ RL A + + + P W
Sbjct: 12 DVNRSIYDIKDKVEFSYKSDSGLTEDIIREISSKKNEPEWMLQKRLEALKIYDELDIPPW 71
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D D +Y Y PK+ + + +D+ + T+++LGIP E++ LAG
Sbjct: 72 MP-DISELDMDHIYTYIRPKTDMKAR-WEDLPQNIRDTFDRLGIPEAEKKNLAG------ 123
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
V A +DS V ++EL++ GV+++ + ++P++VKKY ++ + +AAL+
Sbjct: 124 -VGAQYDSEVVYHNVQKELEQQGVVYVDFETGVNKYPEIVKKYFGKLITPRYHKFAALHY 182
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSFVY+P+GV M L +YFR+N G GQFE TLII ++G+ ++EGC+AP+ +
Sbjct: 183 AVWSGGSFVYVPEGVHVKMPLQSYFRLNAPGAGQFEHTLIIIEKGASCHFIEGCSAPRYN 242
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
LHA VEL A ++YST++NW +YN TK+ S I W
Sbjct: 243 VANLHAGAVELFVKKGATLRYSTIENW-------SKNMYNLNTKKAIVEEDGSMI-WVSG 294
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS ++ YP +L+G++S EF I+ + Q +D+G K+ K+T+ + SK IS
Sbjct: 295 SFGSHVSCLYPDTILQGDRSKCEFTGISFAGKGQFLDTGCKVESFGKDTSLNVNSKSISK 354
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G YRG V + A ++ C+SL++ + + TIP I +N +L HEA +
Sbjct: 355 GGGICLYRGVVHIGPRAKGTKGTISCESLMLDSLSRSDTIPDIIIENDDIDLGHEAKIGR 414
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
ISD ++Y + RGI EE A A++V GF + + LP+E+AVE +LID+ EGS+G
Sbjct: 415 ISDGDIYYLMSRGISEEEAKAMLVRGFAEPISKALPLEYAVEMNRLIDLEFEGSIG 470
>gi|260891437|ref|ZP_05902700.1| FeS assembly protein SufB [Leptotrichia hofstadii F0254]
gi|260858820|gb|EEX73320.1| FeS assembly protein SufB [Leptotrichia hofstadii F0254]
Length = 420
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 168/436 (38%), Positives = 256/436 (58%), Gaps = 16/436 (3%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M E+RL A + + W +D +D+ +Y P S ++ DDV + T++
Sbjct: 1 MREFRLKALEVYNSKPMTDWGP-DLSDLDVNDIVHYLEPDSAPMNENWDDVPSYIRDTFD 59
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+LGIP E++ LAG V A +DS V + +ELK+ GVI+ I A+ E+ D++
Sbjct: 60 RLGIPEAEKQSLAG-------VGAQYDSEVVYHSIHKELKEQGVIYTDIETAMVEYEDML 112
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K+Y T++ V D+ +AAL+ AV++ GSF+Y+PKGV+ M L +YFR+N GQFE TLI
Sbjct: 113 KEYFMTLITVNDHKFAALHGAVWSGGSFIYVPKGVKVNMPLQSYFRLNAPEAGQFEHTLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I DEG+ + Y+EGC+AP+ +N LHA VEL A ++YST++NW +YN
Sbjct: 173 IVDEGADLHYIEGCSAPKYQKNALHAGAVELFVRKGARLRYSTIENW-------SRNMYN 225
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
TKR + W GS ++ YP +L+G++S EF + + Q +D+G
Sbjct: 226 LNTKRAIV-EDDGVVEWISGSFGSRVSMLYPMSILKGDRSRCEFTGVTFAAAGQYLDTGC 284
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
K++H K T+S + SK IS YRG + V A +R+ +C+SL++ N + TI
Sbjct: 285 KIIHQGKQTSSTVHSKSISKNGGTAFYRGLLKVLPEATGARSTVECESLMLDNESTSDTI 344
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P I+ N S ++ HEA +ISDE +FY + RGI E+ A A+IV GFV + ++LP+E+A
Sbjct: 345 PIIDINNDSVDIGHEAKIGRISDEAIFYLMSRGISEDEAKAMIVRGFVEPISKELPLEYA 404
Query: 474 VEAQKLIDISLEGSVG 489
VE KLI++ LEG++G
Sbjct: 405 VELNKLIELELEGTIG 420
>gi|307297753|ref|ZP_07577559.1| FeS assembly protein SufB [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917013|gb|EFN47395.1| FeS assembly protein SufB [Thermotogales bacterium mesG1.Ag.4.2]
Length = 464
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 284/479 (59%), Gaps = 18/479 (3%)
Query: 12 RKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
K+ +D ++ F +N + + +G E + IS +KNEP+WML+ RL +++ +
Sbjct: 3 EKVFLDSSRFDFLSNTKYRFMSERGFGESQVIDISKRKNEPEWMLKKRLQSFKAFSLSSK 62
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P + + ++D + Y P S +S DDV E+ T+EKLGIP E+E LAG
Sbjct: 63 PGFG-VSTESLDLSRIISYLGPDSD-KHRSWDDVPQEIRETFEKLGIPEAERESLAG--- 117
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
V A FDS V ++EL++ G++F+ + A+ ++P+LV+++ VP D+ +AA
Sbjct: 118 ----VGAQFDSEIVYQNIRKELEELGIVFLDMETAVKKYPELVRRFFMKAVPPTDHRFAA 173
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
L+ AV++ GSFVY+PKGV+ P+ L YFR+N + +GQFE TLIIADEGS + ++EGC+AP
Sbjct: 174 LHGAVWSGGSFVYVPKGVKVPLPLQAYFRMNVESSGQFEHTLIIADEGSDLQFIEGCSAP 233
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ ++ LH +VE+ L +A+++YST+QNW YN TKR + W
Sbjct: 234 RFNDLNLHVGMVEIFVLKDAKVRYSTIQNW-------SKNTYNLNTKRAIV-EEGGTMEW 285
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS T YPS +LRG + E I + Q +D+G+K++HLA +T+S + ++
Sbjct: 286 ISGSLGSMKTMLYPSSVLRGRGARAEHLGITYAGPGQHMDTGSKVIHLAPDTSSLVDARS 345
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS G YRG + + R A +SR+ +C +L+I N A T+P I+ N++ + HEA
Sbjct: 346 ISVGGGWAFYRGFLDISRSAMNSRSSVKCTALMIDNESRADTVPIIQVMNNAAEVGHEAR 405
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ +E +FY + RG+ E A A+IV GF+ V +LP+E+AVE +LID +E S+G
Sbjct: 406 IGRLGEEEIFYLMSRGLSESEAKAIIVRGFMEPVSHQLPVEYAVELNRLIDTEMESSIG 464
>gi|171910582|ref|ZP_02926052.1| FeS assembly protein SufB [Verrucomicrobium spinosum DSM 4136]
Length = 471
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 201/490 (41%), Positives = 299/490 (61%), Gaps = 20/490 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M + +R V + + V A GL+E I +I KN+PDW+ E+R
Sbjct: 1 MSVETPDIADIRADSVGDF---YFPENHVYDAGYGLSEKTIDYICDVKNDPDWVREFRKK 57
Query: 61 AYRRWLTMKDPS-WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + + P+ WA I F++ YY A +S DDV E+ +T+E+LGIP
Sbjct: 58 ALKVFEEKPMPTHWATTDLNNIKFEEFRYYLA-GDRKAKRSWDDVPEEVKKTFERLGIPE 116
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+E++ LAG V+A +DS + + K+ +++ GVIFM +EA+ +HP++ +K+
Sbjct: 117 QERKFLAG-------VEAQYDSEAAYSNVKKVVEEQGVIFMNSTEALQQHPEIFRKWFGK 169
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN ++ALNSAVF+ GSF+YIP GV+ L YFRIN + GQFERTLIIADEG+
Sbjct: 170 VIPTGDNKFSALNSAVFSGGSFIYIPPGVKVKHPLQAYFRINSEQFGQFERTLIIADEGA 229
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V Y+EGCTAP+ + LH+AVVELVA+ A+I+Y TVQNW ++N VTKRG
Sbjct: 230 EVMYMEGCTAPKFETATLHSAVVELVAMKGAKIQYVTVQNW-------SSNVFNLVTKRG 282
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+++ W GS +T KYP +++G ++ GE SIA++N Q D+G KM+H A
Sbjct: 283 IAH-EDAEVRWIDCNIGSRLTMKYPGVVMKGRRARGEVISIALANTGQHQDTGAKMIHAA 341
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
TTS ++SK IS G TYRG V + + +N T+CD+LLI ++ T P I +
Sbjct: 342 DETTSNVISKSISIGKGRATYRGLVHIPKHLKGCKNNTECDALLINSSSRTDTYPAINVR 401
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ +HEA+ S++S E +FY QRG+ E A++L VNGF+ +++++ PME++VE ++L
Sbjct: 402 GNEHATQHEASVSQVSAEQIFYMQQRGLSEAEAMSLSVNGFINDLVREFPMEYSVELKRL 461
Query: 480 IDISLEGSVG 489
ID+ +EGSVG
Sbjct: 462 IDLEMEGSVG 471
>gi|87303963|ref|ZP_01086601.1| FeS assembly protein SufB [Synechococcus sp. WH 5701]
gi|87281574|gb|EAQ73595.1| FeS assembly protein SufB [Synechococcus sp. WH 5701]
Length = 407
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 254/410 (61%), Positives = 321/410 (78%), Gaps = 5/410 (1%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T R + YKYGF T I+ DK KGL+E+++R IS+KK+EP+++L +RL A+R WL
Sbjct: 2 TSTSTRDLVSQPYKYGFVTEIETDKIDKGLSEEVVRLISSKKDEPEFLLNFRLKAFRHWL 61
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
T+++P WA + Y AID+ D+ YYAAPK SLD+VDP+LL T++KLGIP+ EQ+ L+
Sbjct: 62 TLEEPDWAALGYEAIDYQDIIYYAAPKQQAKKASLDEVDPKLLETFDKLGIPLSEQKRLS 121
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
VAVDAVFDSVS+ TT+KE+L + GV+F +EA+ +HP+L++KYL +VV DN
Sbjct: 122 -----NVAVDAVFDSVSIATTYKEKLAEHGVVFCSFTEAVKDHPELIEKYLGSVVASNDN 176
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
++AALNSAVF+DGSFV+IPKGV CPMELSTYFRIN TGQFERTLI+A+EG+ VSYL+G
Sbjct: 177 YFAALNSAVFSDGSFVFIPKGVECPMELSTYFRINSGDTGQFERTLIVAEEGASVSYLQG 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
CT P D NQLHAAVVELV LD+A IKYSTVQNWY G+ G GGIYNFVTKRG CRG RS
Sbjct: 237 CTGPMVDTNQLHAAVVELVVLDDASIKYSTVQNWYAGNENGVGGIYNFVTKRGQCRGARS 296
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ISWTQ+ETGSAITWKYPSC+L+G S GEFYS+A++N QQ D+GTKM+H+ T S I
Sbjct: 297 RISWTQVETGSAITWKYPSCVLQGADSVGEFYSVALTNNCQQADTGTKMIHVGPRTRSTI 356
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
VSKGISAG S+N+YRG V + GA +RN++QCDS+LIG+ A+T PYI
Sbjct: 357 VSKGISAGRSSNSYRGLVQMGPGAKGARNYSQCDSMLIGDQAAANTYPYI 406
>gi|225408019|ref|ZP_03761208.1| hypothetical protein CLOSTASPAR_05240 [Clostridium asparagiforme
DSM 15981]
gi|225042452|gb|EEG52698.1| hypothetical protein CLOSTASPAR_05240 [Clostridium asparagiforme
DSM 15981]
Length = 468
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 169/477 (35%), Positives = 265/477 (55%), Gaps = 19/477 (3%)
Query: 15 DVDQYKYGFETNI-QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
D+D+ Y + GL+ I+ IS +KN+P WM +RL + + + M+ W
Sbjct: 9 DIDRSIYDIRNEEKDAYRIETGLSPAIVEQISREKNDPLWMELFRLESLQIYNNMRIQDW 68
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+D +++ Y + + +V E+ T+E+LGIP E+ LAG
Sbjct: 69 GP-SLEGLDMNNIATYVRSNTGMKGD-WAEVPEEIKDTFERLGIPQAEKRSLAG------ 120
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVGDNFYAALN 192
V A +DS V + E+ + GV++ + AI E+ DLVKK+ +VP D+ +AAL+
Sbjct: 121 -VGAQYDSELVYHNVRREVAEQGVVYTDLESAIKGEYGDLVKKHFMKLVPPNDHKFAALH 179
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
AV++ GSFVY+P GV+ + L +YFR+N G GQFE TLII DEG+ + ++EGC+AP+
Sbjct: 180 GAVWSGGSFVYVPPGVQVEIPLQSYFRLNAPGAGQFEHTLIIVDEGASLHFIEGCSAPKY 239
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+ LHA VEL NA+++YST++NW +YN TKR I W
Sbjct: 240 NVANLHAGCVELFVGKNAKLRYSTIENW-------SKNMYNLNTKRAQV-AEGGTIEWVS 291
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
GS ++ YP +L+G + EF I + Q +D+G K++H A TTS + ++ IS
Sbjct: 292 GSFGSHVSCLYPMSILKGRGARMEFTGITFAGEGQNLDTGAKVVHAAPETTSYMNTRSIS 351
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
+T+R V V +GAA S+ C SL++ + T+P ++ + ++ HEA
Sbjct: 352 KSGGVSTFRSSVVVAKGAAGSKAAVSCQSLMLDGISRSDTVPAMDIRTKDADIGHEAKIG 411
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ISDE +FY + RG+ EE A A+IV+GF V ++LP+E+AVE LI + ++GS+G
Sbjct: 412 RISDEAVFYLMSRGLSEEEARAMIVSGFADSVAKELPLEYAVEMNNLIRMEMKGSIG 468
>gi|258614821|ref|ZP_05712591.1| hypothetical protein EfaeD_03832 [Enterococcus faecium DO]
Length = 430
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 180/443 (40%), Positives = 261/443 (58%), Gaps = 18/443 (4%)
Query: 15 DVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++++YK+GF +++ V +GL E++IR +S K EP+WMLE+RL + + M +W
Sbjct: 5 ELEEYKFGFHDDVEPVFSTGEGLTEEVIREMSRIKGEPEWMLEFRLKSLETFNKMPMQTW 64
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
IDFD + YY P + +DV ++ T+EK+GIP E+ LAG
Sbjct: 65 GP-DLSDIDFDAIKYYQKPSDKPA-RDWEDVPEKIKDTFEKIGIPEAERAYLAGAS---- 118
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K+E +K G++F A+ E+P+L K+Y S +VP DN AALNS
Sbjct: 119 ---AQYESEVVYHNMKDEFEKLGIVFTDTDSALKEYPELFKEYFSKLVPPTDNKLAALNS 175
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ G+F+Y+PKGV+ + L TYFRIN + TGQFERTLII DEG+ + Y+EGCTAP
Sbjct: 176 AVWSGGTFIYVPKGVKVDVPLQTYFRINAENTGQFERTLIIVDEGASIHYVEGCTAPTYS 235
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LHAA+VE+ +A +Y+T+QNW +YN VTKR + + W
Sbjct: 236 SNSLHAAIVEIFTRKDAYCRYTTIQNW-------SDNVYNLVTKRAKAY-EGATVEWIDG 287
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ T KYPS L G+ + G SIA + Q D+G KM+H A NT+S IVSK IS
Sbjct: 288 NLGAKTTMKYPSVYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSISK 347
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
YRG+V+ + +A S + +CD++++ + TIP+ E NS +LEHEA SK
Sbjct: 348 DGGEVNYRGQVTFAKNSAGSISHIECDTIIMDEWSKSDTIPFNEIHNSQVSLEHEAKVSK 407
Query: 434 ISDEHLFYCLQRGIPEEAAIALI 456
IS+E L+Y + RG+ E A +I
Sbjct: 408 ISEEQLYYLMSRGLTESEATEMI 430
>gi|187734995|ref|YP_001877107.1| FeS assembly protein SufB [Akkermansia muciniphila ATCC BAA-835]
gi|187425047|gb|ACD04326.1| FeS assembly protein SufB [Akkermansia muciniphila ATCC BAA-835]
Length = 478
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 208/490 (42%), Positives = 301/490 (61%), Gaps = 18/490 (3%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
+ E + D D+ K F A GL E I +I K++P+W+ ++R
Sbjct: 5 PDMSENGNTQNLFDFDRSKGNFSFPERHKFDAGYGLTEATIDYICDVKDDPEWVRQFRKN 64
Query: 61 AYRRWLTMKDPS-WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + + P+ WA IDF + YY + +S DDV ++ RT+E+LG+P
Sbjct: 65 ALAVFESKPMPTHWASPDIKKIDFSQIRYYLSDGERPK-RSWDDVPEDVKRTFERLGVPE 123
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+E++ LAG V+A +DS S + KEEL+ GVIF+ +E + H D+ + +
Sbjct: 124 QERQFLAG-------VEAQYDSESAYSNMKEELRSQGVIFVNSTEGLKHHEDVFRPWFGK 176
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V+P GDN ++ALNSAVF+ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADEG+
Sbjct: 177 VIPTGDNKFSALNSAVFSGGSFIYVPKGVKLKHPLQAYFRINSENFGQFERTLIIADEGA 236
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ Y+EGCTAPQ + + LH+AVVELVAL A+I+Y TVQNW ++N VTKRG
Sbjct: 237 ELMYMEGCTAPQFETSTLHSAVVELVALKGAKIQYVTVQNW-------SSNVFNMVTKRG 289
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++I W GS +T KYP+ +L+G ++ GE SIA++N Q D+G KM+H A
Sbjct: 290 LAM-EDAEIRWIDCNIGSGLTMKYPAVVLKGRRARGEVISIALANTGQHQDTGAKMIHAA 348
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+TTS IVSK IS G +YRG+V + +G RN T+CD+LL+ N T P I K
Sbjct: 349 DDTTSNIVSKSISIGEGRASYRGQVIMGKGLKGCRNNTECDALLLAANSRTDTYPAITVK 408
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++HEA+ S++S+E LFY QRGIP+ AA++L VNGF+ +++Q+ PME++VE ++L
Sbjct: 409 GDGGTVQHEASVSQVSEEMLFYMQQRGIPKAAAMSLAVNGFINDLVQEFPMEYSVELRRL 468
Query: 480 IDISLEGSVG 489
ID+ +E S+G
Sbjct: 469 IDLEMEDSIG 478
>gi|189220479|ref|YP_001941119.1| cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
gi|189187337|gb|ACD84522.1| Cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
Length = 474
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 211/491 (42%), Positives = 302/491 (61%), Gaps = 19/491 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M +V+ET + + ++ F ++ A GLNE I +I KN+PDW+ +R
Sbjct: 1 MQSVKETNKE-DIVKINSLVEDFFYDVNYTYDAGVGLNEKTIDYICDIKNDPDWIRAFRK 59
Query: 60 LAYRRWLTMKDP-SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
+ + +L P WA IDF+ + YY A +S D+V E+ +T+E+LGIP
Sbjct: 60 RSLQIFLQKPLPVHWASKELEKIDFNKIRYYLA-YDKKAQRSWDEVPEEVKKTFERLGIP 118
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+E++ LAG V+A FDS S + KE L K GVIF+ +E + ++PD+ +K+ +
Sbjct: 119 EQERKFLAG-------VEAQFDSESAYSNIKESLSKQGVIFVGSTEGLHQYPDIFRKWFA 171
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
V+P DN +AALNSAVF+ GSF+Y+P GV+ L YFRIN + GQFERTLIIADEG
Sbjct: 172 KVIPPADNKFAALNSAVFSGGSFIYVPPGVKVQQPLQAYFRINAESFGQFERTLIIADEG 231
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S V+Y+EGCTAP+ + + LH+AVVELVA+ A+I+Y TVQNW ++N VTKR
Sbjct: 232 SEVTYMEGCTAPRFETSTLHSAVVELVAMPGAKIQYITVQNW-------SSNVFNLVTKR 284
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+++ W GS +T KYP +L+G +S GE SIA++N Q D+G KM H
Sbjct: 285 AIAMEE-AEVRWLDCNIGSKLTMKYPGVILQGRKSRGEVLSIALANTGQHQDTGAKMYHA 343
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A TTS I+SK IS G +YRG VS+ + +N T+CD+LLI T P I
Sbjct: 344 ADETTSNIISKSISIGSGRASYRGLVSIPNHLKNCKNNTECDALLINTTSRTDTYPAITV 403
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ +HEA+ SKIS E LFY QRG+PE+ A++L VNGF+ +++++ PME++VE ++
Sbjct: 404 MGNRNATQHEASVSKISAEQLFYMQQRGLPEDEAMSLSVNGFINDLVREFPMEYSVELKR 463
Query: 479 LIDISLEGSVG 489
LID+ +EGSVG
Sbjct: 464 LIDLEMEGSVG 474
>gi|254443165|ref|ZP_05056641.1| FeS assembly protein SufB [Verrucomicrobiae bacterium DG1235]
gi|198257473|gb|EDY81781.1| FeS assembly protein SufB [Verrucomicrobiae bacterium DG1235]
Length = 469
Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats.
Identities = 209/479 (43%), Positives = 298/479 (62%), Gaps = 18/479 (3%)
Query: 13 KIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDP 71
+I+VD+ K F + A GL+E +I +I K E W+ ++R A + + + P
Sbjct: 7 EIEVDREKGNFRFSEHHKYDAGVGLSEKVIDYICDVKEEDQWIRDFRKRALKVFESKPMP 66
Query: 72 S-WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
+ WA IDFD + YY +S DDV ++ T+E+LGIP E++ LAG
Sbjct: 67 TNWATKDLENIDFDKIRYYL-SGGNRASKSWDDVPDDVKETFERLGIPENERKFLAG--- 122
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
V+A FDS + + KE + K GVIFM +EA+ +HP++ KK+ V+P GDN ++A
Sbjct: 123 ----VEAQFDSEAAYSNIKESVGKQGVIFMGSTEALMKHPEIFKKWFGKVIPTGDNKFSA 178
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVF+ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADEGS V+Y+EGCTAP
Sbjct: 179 LNSAVFSGGSFIYVPKGVKVSHPLQAYFRINAENFGQFERTLIIADEGSEVTYMEGCTAP 238
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ D LH+AVVELVAL A+I+Y TVQNW ++N VTKR + + W
Sbjct: 239 KFDTATLHSAVVELVALPGAKIEYVTVQNW-------SSNVFNLVTKRAIAH-EGATVKW 290
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
GS +T KYP +L+G+ + GE SIA++N Q D+G KM+H A T+S I+SK
Sbjct: 291 IDCNIGSRLTMKYPGVVLKGKGARGEVLSIALANDGQHQDTGAKMIHAADETSSNIISKS 350
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS G +TYRG+V + + +N T+CD+LLI N T P I + + ++HEA+
Sbjct: 351 ISVGKGRSTYRGQVHMPKNLKGCKNNTECDALLINENSRTDTYPAITVRGNRNAVQHEAS 410
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SK+S E +FY QRG+ E AA++L VNGFV ++ ++ PME++VE ++LI++ +EGSVG
Sbjct: 411 VSKVSAEQIFYMQQRGLSEAAAMSLSVNGFVNDLTRQFPMEYSVELKRLIELEMEGSVG 469
>gi|294054746|ref|YP_003548404.1| FeS assembly protein SufB [Coraliomargarita akajimensis DSM 45221]
gi|293614079|gb|ADE54234.1| FeS assembly protein SufB [Coraliomargarita akajimensis DSM 45221]
Length = 474
Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats.
Identities = 209/491 (42%), Positives = 307/491 (62%), Gaps = 19/491 (3%)
Query: 1 MVAVR-ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRL 59
M V ++ +D + + F + + D A GLNED +++IS K E DW+ E+RL
Sbjct: 1 MSEVDINEQEEALNLDTEIGNFSFPEDYEYD-AGVGLNEDTVKYISNVKKEDDWVREFRL 59
Query: 60 LAYRRWLTMKDPS-WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
A + P+ WA I FD + YY K ++ ++V ++ T+E+LGIP
Sbjct: 60 KALDIFNKKPMPTSWATDDLDNIKFDQIRYYL-SKGQKPSRTWEEVPDDVKETFERLGIP 118
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
+E++ LAG V+A FDS + + KE+L+K GVIF+ +E + ++P++ + Y
Sbjct: 119 EQERKFLAG-------VEAQFDSEAAYSRMKEDLEKEGVIFVGSTEGLAKYPEIFRPYFG 171
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
V+P DN ++ALNSA F+ GSF+Y+PKGV+ L YFRIN + GQFERTLIIADEG
Sbjct: 172 KVIPTSDNKFSALNSATFSGGSFIYVPKGVKLKQPLQAYFRINAENFGQFERTLIIADEG 231
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ V+Y+EGCTAP + + LH+AVVELVAL A+I+Y TVQNW ++N VTKR
Sbjct: 232 AEVTYMEGCTAPSFETSTLHSAVVELVALKGAKIQYITVQNW-------SNNVFNLVTKR 284
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G ++I W GS +T KYP +L+G+ + GE SIAI+N Q D+G KM+HL
Sbjct: 285 GMA-DEDAEIKWIDCNIGSRLTMKYPGVVLKGKGARGEVLSIAIANDGQHQDTGAKMIHL 343
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +T+S I+SK IS G +TYRG+V + + +N T+CD+LLI N T P I +
Sbjct: 344 ASDTSSNIISKSISIGEGRSTYRGQVHMPKHLKDCKNNTECDALLINTNSRTDTYPAITT 403
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ + ++HEA+ SK+S E +FY +QRG+ E A++L VNGFV +++Q PME++VE ++
Sbjct: 404 RGENNTVQHEASVSKVSAEQIFYMMQRGLSEGEAMSLAVNGFVNDLVQAFPMEYSVELKR 463
Query: 479 LIDISLEGSVG 489
LID+ +EGSVG
Sbjct: 464 LIDMEMEGSVG 474
>gi|260433733|ref|ZP_05787704.1| FeS assembly protein SufB [Silicibacter lacuscaerulensis ITI-1157]
gi|260417561|gb|EEX10820.1| FeS assembly protein SufB [Silicibacter lacuscaerulensis ITI-1157]
Length = 419
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 285/406 (70%), Positives = 335/406 (82%), Gaps = 11/406 (2%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
+ETVD VR++ YKYG++T+I+++ APKG+N DI++ IS K EP+WM EWRL A+ R
Sbjct: 15 QETVDAVREV--GTYKYGWDTDIEMEYAPKGVNPDIVKLISEKNEEPEWMTEWRLKAFER 72
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQE 123
W M++P WA + YP IDF D YYYA PKS+ P+SLD+VDP+LL TYEKLGIP++EQ
Sbjct: 73 WTQMEEPKWAMVHYPEIDFQDQYYYARPKSMETKPKSLDEVDPKLLATYEKLGIPLKEQM 132
Query: 124 ILAGV--------QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
ILAGV + KVAVDAVFDSVSV TTF+ ELKK+GVIF ISEAI EHP+LVKK
Sbjct: 133 ILAGVDGAEDAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIKEHPELVKK 192
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YL +VVPV DNFYA LNSAVF+DGSFVY+P GVRCPMELSTYFRIN + TGQFERTLIIA
Sbjct: 193 YLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIA 252
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+GSYVSYLEGCTAPQRD QLHAAVVE++ ++AE+KYSTVQNW+PGD GKGGIYNFV
Sbjct: 253 DKGSYVSYLEGCTAPQRDTAQLHAAVVEIIVEEDAEVKYSTVQNWFPGDENGKGGIYNFV 312
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
TKR DCRG RSK+ WTQ+ETGSA+TWKYPSC+LRG+ S GEFYSIAI+N QQ D+GTKM
Sbjct: 313 TKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAITNNMQQADTGTKM 372
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
+HL KNT SRIVSKGISAG + NTYRG VS+H A +SRN+TQCDS
Sbjct: 373 IHLGKNTKSRIVSKGISAGKAQNTYRGLVSMHPKAKNSRNYTQCDS 418
>gi|29468207|gb|AAO85446.1| putative ABC transporter membrane protein Ycf24 [Neoceratium
horridum]
Length = 371
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 267/376 (71%), Positives = 318/376 (84%), Gaps = 5/376 (1%)
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
KLGI + EQ+ L G VAVDAV DSVSV TTFK+ L + G+IF SEA+ EHP+LV
Sbjct: 1 KLGISLTEQKRLTG-----VAVDAVIDSVSVATTFKDTLGRLGIIFCSFSEAVKEHPELV 55
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+K++ TVVP DN++AALNSAVF+DGSF YIPKGVRCPMELSTYFRIN TGQFERTLI
Sbjct: 56 RKHMGTVVPTSDNYFAALNSAVFSDGSFAYIPKGVRCPMELSTYFRINAANTGQFERTLI 115
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ADEGSYVSYLEGCTAPQRDENQLHAAVV++ A +AE+KYSTVQNWYPGD G GGIYN
Sbjct: 116 VADEGSYVSYLEGCTAPQRDENQLHAAVVDIKAAKDAEVKYSTVQNWYPGDKNGNGGIYN 175
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTKRG C G SKISWTQ+ETGSA+TWKYPSC+L+G+ S GEFYS+A++N +QQ D+GT
Sbjct: 176 FVTKRGICEGDNSKISWTQVETGSAVTWKYPSCILKGDNSQGEFYSVAVTNNYQQADTGT 235
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ KNT SRIVSKGISAG+S N+YRG+V V + A ++RNF+QCDSLL+GN CGAHT
Sbjct: 236 KMIHIGKNTKSRIVSKGISAGYSQNSYRGQVQVMKRAENARNFSQCDSLLMGNKCGAHTF 295
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYI+ +NSS +EHEATTSKI ++ +FYC QRGI EE+A+ALIVNG+ +EVL KLPMEFA
Sbjct: 296 PYIDIENSSAQVEHEATTSKIGEDQIFYCQQRGIDEESAVALIVNGYAKEVLNKLPMEFA 355
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ++LEGSVG
Sbjct: 356 VEAQKLLALTLEGSVG 371
>gi|291534069|emb|CBL07182.1| Iron-regulated ABC transporter membrane component SufB [Megamonas
hypermegale ART12/1]
Length = 420
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 159/437 (36%), Positives = 253/437 (57%), Gaps = 18/437 (4%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M E+RL + + ++ P W ++ D++ Y P + + +V ++ T++
Sbjct: 1 MREFRLRSLEIYHSLDVPPWGP-SIDDLNIDNIVTYVKPNTDMQGS-WKNVPEDIKDTFD 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD-L 172
KLGIP EQ+ LAG V A +DS V KEE+ K GVI+ I A+ + +
Sbjct: 59 KLGIPQAEQKSLAG-------VGAQYDSEVVYHNLKEEVAKLGVIYTDIETALKGPYEPM 111
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
++++ +V D+ +AAL+ AV++ GSFVY+P GV+ + L +YFR+N G GQFE TL
Sbjct: 112 IREHFMKLVTPRDHKFAALHGAVWSGGSFVYVPPGVKVDIPLQSYFRLNAAGAGQFEHTL 171
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II D+G+ + ++EGC+AP+ + LHA VEL D+A+++YST++NW +Y
Sbjct: 172 IIVDKGADLHFIEGCSAPKYNVANLHAGCVELFVADDAKLRYSTIENW-------SKNMY 224
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N TKR G + + W GS I++ YP +L GE + EF I + Q +D+G
Sbjct: 225 NLNTKRAKV-GKNATMEWISGSFGSHISYLYPMTILAGENAKAEFTGITFAGKGQNLDTG 283
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
KM+H A +T+S I +K IS +T+R V V + A HS+ C SL++ N + T
Sbjct: 284 AKMVHNAPHTSSLINTKSISKDGGASTFRSSVVVAKQAQHSKALVSCQSLMLDNISRSDT 343
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
IP ++ + + ++ HEA +ISD+ +FY + RG+ E AA A+IVNGF + ++LP+E+
Sbjct: 344 IPAMDVRTNKASVGHEAKIGRISDQAVFYLMSRGLSEAAARAMIVNGFANPISKELPVEY 403
Query: 473 AVEAQKLIDISLEGSVG 489
AVE LI + +EG++G
Sbjct: 404 AVEMNHLIQLEMEGAIG 420
>gi|24215508|ref|NP_712989.1| ABC transporter permease [Leptospira interrogans serovar Lai str.
56601]
gi|45657103|ref|YP_001189.1| ABC transporter permease protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24196645|gb|AAN50007.1| ABC transporter permease [Leptospira interrogans serovar Lai str.
56601]
gi|45600340|gb|AAS69826.1| ABC transporter permease protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 471
Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats.
Identities = 189/482 (39%), Positives = 287/482 (59%), Gaps = 25/482 (5%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ +T++K + I D+Y + D PKGL ++ IS KNEP W+ +RL A+
Sbjct: 1 MEQTLEK-KSIHEDRY-------YRPDNFPKGLTRKVVESISHIKNEPGWLTSFRLKAFE 52
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P+W +D D +Y +S D+VDPE+L+++E+LGIP E++
Sbjct: 53 IYEQKPMPTWGFFPNFNVDIDSYTHYIGSNQ-QKKKSWDEVDPEVLKSFERLGIPEHERK 111
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG++ A+ DS +V K+EL + G++F I AI E+P++VKKYL TVV V
Sbjct: 112 YLAGIE-------AMNDSETVYANVKKELTELGILFCDIDTAIREYPEIVKKYLGTVVSV 164
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN ++ALNS VF+ GSF ++PKGV+ PM L YF++ +GQ+ERTL+IADEG+ + Y
Sbjct: 165 GDNKFSALNSCVFSGGSFAFVPKGVKTPMPLQAYFKVTAASSGQYERTLLIADEGAELEY 224
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
EGC++ Q H AVVEL++ NA+I Y+T+QNW K +YN+ KRG C
Sbjct: 225 SEGCSSVQDKGTNFHTAVVELISHKNAKIFYTTIQNW-------KKNMYNWTVKRGLCYE 277
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
I+WT + A T KYP +L+G+ S G+ S+A + G Q D+G +++H+ KNT
Sbjct: 278 R-GHITWTDVNI-GANTIKYPGIVLQGDHSTGDILSLAFAGGGQIQDTGARIIHVGKNTR 335
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I++KG+S N+YRG V G+ +S + +CD L++ + +H PY + +
Sbjct: 336 SNILAKGVSLDGGINSYRGLVKFTSGSENSYSHVKCDGLMMDDRSQSHAYPYNDVSGQNG 395
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
L +EAT S+I ++ LFY RG+ E+ A LI+NGF V + L +E++VE +LI +
Sbjct: 396 TLNYEATVSRIDEDQLFYLQSRGLSEDDAKLLIINGFCEGVTKHLNVEYSVEMTRLIRMI 455
Query: 484 LE 485
LE
Sbjct: 456 LE 457
>gi|116328652|ref|YP_798372.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330691|ref|YP_800409.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|116121396|gb|ABJ79439.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124380|gb|ABJ75651.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 471
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 185/456 (40%), Positives = 275/456 (60%), Gaps = 17/456 (3%)
Query: 30 DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYY 89
D PKGL ++ IS KNEPDW+ E+RL A+ + P+W +D D +Y
Sbjct: 19 DNFPKGLTRKVVESISHIKNEPDWLTEFRLKAFEIYEQKPMPTWGFFPNFNVDIDSYTHY 78
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
+S D+VDPE+L+++E+LGI E++ LAG++ A+ DS +V K
Sbjct: 79 IGSNQ-QKKKSWDEVDPEVLKSFERLGILEHERKYLAGIE-------AMNDSETVYANVK 130
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
+EL + G++F I AI E+PD+V+KYL TVV VGDN ++ALNS VF+ GSF ++PKGV+
Sbjct: 131 KELTELGILFCDIDTAIREYPDIVRKYLGTVVSVGDNKFSALNSCVFSGGSFAFVPKGVK 190
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
PM L YF++ +GQ+ERTL+IADEG+ + Y EGC++ Q H AVVEL+A N
Sbjct: 191 TPMPLQAYFKVTAASSGQYERTLLIADEGAEIEYSEGCSSVQDKGTNFHTAVVELIAHKN 250
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A+I Y+T+QNW K +YN+ KRG C I+WT + A T KYP +L+
Sbjct: 251 AKIFYTTIQNW-------KKNMYNWTVKRGLCHER-GHITWTDVNI-GANTVKYPGIVLQ 301
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ S G+ S+A + Q D+G +++H+ KNT S I++KG+S N+YRG V G
Sbjct: 302 GDHSTGDVLSLAFAGDGQIQDTGARIIHVGKNTRSNILAKGVSLDGGINSYRGLVKFTSG 361
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
+ +S + +CD L++ + +H PY + + L +EAT S+I ++ LFY RG+ E
Sbjct: 362 SKNSYSHVKCDGLMMDDRSQSHAYPYNDVSGQNGTLNYEATVSRIDEDQLFYLQSRGLSE 421
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
+ A LI+NGF V + L +E++VE +LI + LE
Sbjct: 422 DDAKLLIINGFCEGVTKHLNVEYSVEMTRLIRMILE 457
>gi|18977658|ref|NP_579015.1| hypothetical protein PF1286 [Pyrococcus furiosus DSM 3638]
gi|6066239|gb|AAF03224.1|AF156097_4 ORF4 [Pyrococcus furiosus]
gi|18893384|gb|AAL81410.1| hypothetical protein PF1286 [Pyrococcus furiosus DSM 3638]
Length = 475
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 181/459 (39%), Positives = 267/459 (58%), Gaps = 19/459 (4%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG ++ D I +S KNEP WML RL A + + P W + +D D+L Y P
Sbjct: 33 KGKISRDTIEELSKVKNEPSWMLRHRLKALELFEKLPMPKW-VVGIEELDLDNLVLYTKP 91
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
+ + DD+ + +T+E+L IP E+ L+G + AVFDS S+ + K E
Sbjct: 92 EIQNEVRDWDDLPENIRKTFERLNIPEIEKRFLSG-------LTAVFDSESIYSKLKAEF 144
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
+K G+I +P+ EA+ ++PDLVK+Y V P GD+ +AAL+ A+++ G FVY+PKGV+ P
Sbjct: 145 EKKGIIMVPMEEAVRKYPDLVKRYFGKVFPPGDHKFAALHHALWSGGVFVYVPKGVKIPF 204
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ +F I GQFE TLIIADEGSY+ ++EGC+AP H +VE+ A +A +
Sbjct: 205 PIEAFFVIGSALEGQFEHTLIIADEGSYLHFIEGCSAPMYKGFSFHDGMVEIYAHKDATV 264
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
K++T+QNW + NF KR + + W + GS IT+ YPS +L+G
Sbjct: 265 KFTTIQNW-------SRNVINFNNKRAII-EDNAYVEWIEGSIGSRITYTYPSSVLKGPG 316
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ Y +++SNG D+G K HLA NT+S+IVSK ISA N YRG V + +GA +
Sbjct: 317 AKTTQYVVSLSNGPYLKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRIMKGAIN 376
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S CDSL++ A+T P+ ++ + ++ HEATT K+S++ LFY RGI EE A
Sbjct: 377 STATVSCDSLILDKESKAYTYPHNQNDEPTASIIHEATTGKLSEDKLFYLKARGIKEEEA 436
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
+LIV GF+ EVL+ LP E+ +K+I++ G VG
Sbjct: 437 KSLIVLGFISEVLEDLPFEYVEVLKKVIELEFSEIGGVG 475
>gi|183220749|ref|YP_001838745.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910850|ref|YP_001962405.1| Fe-S cluster assembly ABC transporter permease [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775526|gb|ABZ93827.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779171|gb|ABZ97469.1| Putative ABC-type transport system, permease, iron-regulated
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 464
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 194/462 (41%), Positives = 276/462 (59%), Gaps = 18/462 (3%)
Query: 28 QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY 87
Q D PKGL ++ IS KNEP W+ E+RL A+ + P+W I I+ DD
Sbjct: 16 QADNFPKGLTRKVVESISHIKNEPSWLAEFRLKAFEVYEQKPMPTWGFIPQFHINIDDYV 75
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
+Y +S D+VDPE+LR++EKLGIP E++ LAG++T DS ++
Sbjct: 76 HYVGSNQKKK-KSWDEVDPEILRSFEKLGIPEHERKYLAGIETMN-------DSETIYAN 127
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
K+EL G+IF I AI E+P+LV++YL TVV +GDN ++ALNS VF+ GSF YIPKG
Sbjct: 128 VKKELTDLGIIFCDIDTAIREYPELVREYLGTVVTIGDNKFSALNSCVFSGGSFAYIPKG 187
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
++ PM L YF++ +GQ+ERTL+IADEG+++ Y EGCT+ Q H AVVELVA
Sbjct: 188 IKTPMPLQAYFKVTAASSGQYERTLLIADEGAHLEYSEGCTSVQDKGTNFHTAVVELVAK 247
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
N++I Y+T+QNW K +YN+ KRG C + I+WT A T KYP +
Sbjct: 248 KNSKIFYTTIQNW-------KKNMYNWTVKRGIC-EEAAHITWTDCNI-GANTIKYPGII 298
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L+G+ S G+ S+A + Q D+G +++H+ KNT S I++KG++ N+YRG V
Sbjct: 299 LQGDHSTGDVLSLAFAGSGQVQDTGARIIHVGKNTRSNILAKGVALDGGINSYRGLVKFE 358
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
+ S + +CD L++ N +H PY + L +EAT SKI D+ LFY RG+
Sbjct: 359 PSSKGSYSHIKCDGLMMDNRSQSHAYPYNDVSGEEGTLNYEATVSKIDDDQLFYLQSRGM 418
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE-GSV 488
E+ A LI+NGF V + L +E++VE KLI + LE G V
Sbjct: 419 SEDDAKLLIINGFCEGVTKHLDVEYSVEMTKLIRMILEDGKV 460
>gi|315231180|ref|YP_004071616.1| Fe-S cluster assembly SufB-like protein [Thermococcus barophilus
MP]
gi|315184208|gb|ADT84393.1| Fe-S cluster assembly SufB-like protein [Thermococcus barophilus
MP]
Length = 475
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 184/459 (40%), Positives = 271/459 (59%), Gaps = 19/459 (4%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG L +D+I +S KNEP+WML RL A + + P W + +D + L Y+ P
Sbjct: 33 KGELTKDMIEELSRIKNEPEWMLRHRLKALELFHKLPMPKW-VVGIEELDLESLTLYSKP 91
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
+ + DD+ + RT+E+L IP E++ L+G + AVFDS SV + KEE
Sbjct: 92 EIGSEVRDWDDLPENIRRTFERLNIPEIEKKFLSG-------LTAVFDSESVYSKLKEEF 144
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
+K G+I +P+ EA+ +PDLVKKY V P G++ ++AL+ A+++ G FVY+PKGVR P
Sbjct: 145 EKKGIIMLPMEEAVQRYPDLVKKYFGRVFPAGEHKFSALHHALWSGGVFVYVPKGVRIPF 204
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ +F I GQFE TL++ADEGSY+ ++EGC+AP H +VE+ A NA +
Sbjct: 205 PVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCSAPMYKGFSFHDGMVEIYAHKNATV 264
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
K++T+QNW + NF KR + + W + GS IT+ YPS +LRGE
Sbjct: 265 KFTTIQNW-------SRNVINFNNKRAII-EENAYVEWIEGSIGSKITYTYPSSILRGEG 316
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ Y +++SNG D+G K +HLA NT+S+IVSK ISA N YRG V + +GA +
Sbjct: 317 ARTAQYVVSLSNGPYLKDTGAKTVHLAPNTSSKIVSKSISANGGINIYRGLVRILKGAKN 376
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S CDSL++ A+T P+ +S + ++ HEATT K+ ++ LFY RGI EE A
Sbjct: 377 STATVSCDSLILDEESRAYTYPHNQSDEPTASIIHEATTGKLGEDKLFYMNSRGISEEEA 436
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
+LIV GF+ E+L+ LP E+ +K+I++ G VG
Sbjct: 437 KSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG 475
>gi|325968926|ref|YP_004245118.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
gi|323708129|gb|ADY01616.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
Length = 477
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 169/470 (35%), Positives = 260/470 (55%), Gaps = 25/470 (5%)
Query: 28 QVDKAP-----KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI 81
++++ P +G + +D+I IS K EPDWM RL A + + +P W I+ I
Sbjct: 25 EMERLPWEAVIRGRITKDMIEEISRIKGEPDWMRRLRLRALEMFEKLPEPKWLPIK-EEI 83
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
D + L YA P S+ S DDV E+ + YE LG+P E +LAG + FDS
Sbjct: 84 DLESLVLYAKP-SVEKAGSWDDVPKEIRKYYEALGMPELEARVLAG-------LLGQFDS 135
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
V K+ L++ G + + EA+ +PDLVK+Y S + P G++ +AAL+ A+++ G+F
Sbjct: 136 EVVYLHVKKYLEEKGAVVTTMDEAVKRYPDLVKQYFSRIFPPGEHKFAALHVALWSGGTF 195
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
VY+P GV+ M + ++F I G GQFE +LIIADEG+ V +LEGC AP H +
Sbjct: 196 VYVPPGVKLDMPIESFFLIGSSGEGQFEHSLIIADEGASVEWLEGCAAPVYKGFSFHDGM 255
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
VE A NA ++ +T+QNW I NF KR S + W + GS +++
Sbjct: 256 VEGYAARNAHLRINTIQNW-------SRNIINFNNKRALAM-ENSTVEWVEGSLGSKVSY 307
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YPS +L+GE + + I+NG ++G K H A T+S+IV+K +S YR
Sbjct: 308 TYPSTVLKGEGARTSIIGVTIANGPFWKENGAKAYHDAPRTSSKIVNKSVSINGGTVVYR 367
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G V V GA ++R+ CDSL++ + A+TIP+ + + + HEA T +IS++ LFY
Sbjct: 368 GLVYVREGAKYTRSSVSCDSLILDDKSRAYTIPHDQVFEDTATVTHEAYTGRISEDKLFY 427
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG--SVG 489
RG E A +LIV GF++++ +LP E+A+ ++I++ VG
Sbjct: 428 LRSRGFDEGTARSLIVLGFIQDITVRLPTEYAMTLNRVIELEFSKLSKVG 477
>gi|332797001|ref|YP_004458501.1| FeS assembly protein SufB [Acidianus hospitalis W1]
gi|332694736|gb|AEE94203.1| FeS assembly protein SufB [Acidianus hospitalis W1]
Length = 505
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 173/488 (35%), Positives = 270/488 (55%), Gaps = 20/488 (4%)
Query: 1 MVAVRETVDKVRKIDVD-QYKYGFETNIQVDK--APKGLNEDIIRFISAKKNEPDWMLEW 57
M + +VD +D + KY I+ + GL+ I IS K EP+WML
Sbjct: 27 MTEEKVSVDINEILDAAIEAKYNRVDQIEFHRRVVESGLSRSTIEAISKAKKEPEWMLRL 86
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL + + + P+W +++ +L Y P + + + + E+ YEKLGI
Sbjct: 87 RLKSLELFEKLPTPNWLPDVLSSLNVSNLELYIKPD-VERTDNWEQIPKEIREYYEKLGI 145
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P EQ++L G + AV +S + K+EL+K GVI MP EA+ ++PD+ K+Y
Sbjct: 146 PQSEQKVLGG-------LVAVLESEPIYANVKQELQKKGVIMMPPEEAMVKYPDIFKQYF 198
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+ P D+ +AAL+ A+++ G FVY+PKGV+ + +F I + GQFE TL+IADE
Sbjct: 199 MKIFPASDHKFAALHGALWSGGVFVYVPKGVKITTPVEGFFVIGTEMEGQFEHTLVIADE 258
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
SY+ ++EGC+APQ H +VEL A DNA IK++T+QNW + NF K
Sbjct: 259 DSYIHFIEGCSAPQFKNFSFHDGMVELFANDNAHIKFTTIQNW-------SKNVINFNNK 311
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN-GFQQIDSGTKML 356
R S I W + GS ++ YPS +LRGE + + +++ DSG+KM+
Sbjct: 312 R-AWANKNSVIEWVEGSLGSKYSFVYPSTILRGEGASSTSLVVTLASAEGDWKDSGSKMI 370
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A +T SR+++K I N YRG V V++GA S+ F +CDSL++ A+T P+
Sbjct: 371 HAAPHTRSRVINKNIGFNGGVNVYRGLVKVNKGAVGSKAFVKCDSLMLDEKTKAYTFPHN 430
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ ++ HEA T ++S++ LFY + RGI E+ A +++V GF+ E++++LP E+A
Sbjct: 431 QVFEEDADVAHEAHTFRMSEDQLFYLMSRGISEKEATSMLVLGFMDEIMRELPFEYAAML 490
Query: 477 QKLIDISL 484
K+I I L
Sbjct: 491 NKVIKIEL 498
>gi|300820074|ref|ZP_07100250.1| FeS assembly protein SufB [Escherichia coli MS 107-1]
gi|300527379|gb|EFK48441.1| FeS assembly protein SufB [Escherichia coli MS 107-1]
Length = 390
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 250/398 (62%), Positives = 316/398 (79%), Gaps = 9/398 (2%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
P ++ + + E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+
Sbjct: 2 PGAVQQTGANAFLSKEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREK 53
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
L + G+IF EAI +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCP
Sbjct: 54 LAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP 113
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
MELSTYFRIN + TGQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE
Sbjct: 114 MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAE 173
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+KYSTVQNW+PGD+ GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+
Sbjct: 174 VKYSTVQNWFPGDNN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGD 232
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
S GEFYS+A+++G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A
Sbjct: 233 NSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTAT 292
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
++RNFTQCDS+LIG NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE
Sbjct: 293 NARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEED 352
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 353 AISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 390
>gi|219683912|ref|YP_002470295.1| FeS assembly protein SufB [Bifidobacterium animalis subsp. lactis
AD011]
gi|219621562|gb|ACL29719.1| FeS assembly protein SufB [Bifidobacterium animalis subsp. lactis
AD011]
Length = 401
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 165/395 (41%), Positives = 242/395 (61%), Gaps = 14/395 (3%)
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
S +D+ ++ TY++LGIP E+ L V A ++S + + +++L K
Sbjct: 21 RQAAASWEDLPEDIRTTYDRLGIPEAEKSRLV------SGVAAQYESEVIYNSIQDDLSK 74
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF+ A+ E+P+LV+KY TVVP DN + ALN+A ++ GSFVY+PKGV + L
Sbjct: 75 QGVIFVDTDTAVREYPELVQKYFGTVVPPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPL 134
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
YFRIN GQFERTLIIADEGSYV Y+EGCTAP + LHAA+VE++ NA ++Y
Sbjct: 135 QAYFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHAAIVEIIVEKNARVRY 194
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+TVQNW +YN VT+R R + + W GS T KYP+C+L +
Sbjct: 195 TTVQNW-------SNNVYNLVTQRAYVR-EGATMEWVDGNIGSKATMKYPACILAEPYAS 246
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + Q D+G KM+HL +T+S IV+K IS G + YRG V + GA S
Sbjct: 247 ASTMSLGFAGKGQYQDTGAKMIHLPPHTSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSS 306
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ CD+LL+ + + T P+++ + ++ HEAT SK+S++ LFY + RGI E+ A+A
Sbjct: 307 SNVVCDALLVDDFSRSDTYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGIEEKEAMA 366
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+IV GFV + ++LPME+A+E +L+++ +EGSVG
Sbjct: 367 MIVRGFVEPISRELPMEYALELNRLVELQMEGSVG 401
>gi|126465028|ref|YP_001040137.1| Iron-regulated ABC transporter membrane component SufB
[Staphylothermus marinus F1]
gi|126013851|gb|ABN69229.1| Iron-regulated ABC transporter membrane component SufB
[Staphylothermus marinus F1]
Length = 471
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 169/488 (34%), Positives = 271/488 (55%), Gaps = 19/488 (3%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ + ++ + ++ +Y E +++ K ++ D++ IS +K EPDWM RL A
Sbjct: 1 MTKPIEISKILEHPEYMEPIEYRREIEIRGK-ISRDLVEEISKQKKEPDWMRRLRLRALE 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ + P W ID D++ Y S DD+ E+ Y +LG+P +
Sbjct: 60 YFEKLPVPKWLY-GIETIDLDEITTYYVKPVEQPVSSWDDLPAEIREIYFRLGLPEAYAK 118
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
LAG + AV DS ++ + KE L+K GVI +P+ +AI +PDLVKKY +V
Sbjct: 119 YLAG-------LTAVLDSETIYSAMKEYLEKIGVIMIPMEQAIRRYPDLVKKYFGKIVSP 171
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
++ +AAL+ A+++ G FVY+PK + P + +F + ++ GQFE ++I+ADEGS +++
Sbjct: 172 IEHKFAALHYALWSGGVFVYVPKNTKVPYPIEAFFFVGKELEGQFEHSIIVADEGSELTF 231
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ + H VEL A A+I + TVQNW I NF KR
Sbjct: 232 IEGCSAPRFKKFSFHDGAVELYAHRKAKISFVTVQNW-------SRNIINFNNKRAIA-E 283
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
S + W + GS T YPS +L+G+ + I I+NG D+G+K++H+A NT
Sbjct: 284 EDSYVEWLEGSIGSKYTVTYPSTILQGKGARTSSVVIGIANGPYIKDTGSKVVHVAPNTR 343
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S+I+SK IS+ N YRG V ++RGA +S ++ QCDSL++ A+T P I +
Sbjct: 344 SKIISKSISSSGGVNIYRGLVHIYRGAKNSTSYVQCDSLILDEKSKAYTYPIIHIEEKDS 403
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
HEATT +I+++ +FY RG+ E A ++IV GF++++L+ LPME+ ++I +
Sbjct: 404 ETGHEATTGRINEDQIFYLQSRGLSEGQAKSMIVLGFIKDILKGLPMEYVAMLSRVIQLE 463
Query: 484 LE--GSVG 489
E G VG
Sbjct: 464 FEKIGGVG 471
>gi|242399695|ref|YP_002995120.1| SufB; FeS assembly protein SufB [Thermococcus sibiricus MM 739]
gi|242266089|gb|ACS90771.1| SufB; FeS assembly protein SufB [Thermococcus sibiricus MM 739]
Length = 475
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 183/459 (39%), Positives = 271/459 (59%), Gaps = 19/459 (4%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG ++ D + +S K EP+WML RL A + + P W + +D D+L Y P
Sbjct: 33 KGKISRDTVEELSRIKKEPEWMLRHRLRALEVFEKLPMPKW-VVGIEELDLDNLILYTKP 91
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
+ + DD+ + +T+E+L IP E++ L+G + AVFDS SV + KEE
Sbjct: 92 ELQKEVKDWDDLPENIRKTFERLNIPEIEKKFLSG-------LTAVFDSESVYSQLKEEF 144
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
+K G+I +P+ EA+ ++PDLVKKY V P G++ ++AL+ A+++ G+FVYIPKGVR P
Sbjct: 145 EKKGIIMLPMEEAVKKYPDLVKKYFGKVFPPGEHKFSALHHALWSGGAFVYIPKGVRVPF 204
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ +F I GQFE TL++ADEGSYV ++EGC+AP H +VE+ A NA +
Sbjct: 205 PIEAFFVIGSALEGQFEHTLLVADEGSYVHFIEGCSAPMYKGFSFHDGMVEIYAHKNATV 264
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
K++T+QNW + NF KR + + W + GS IT+ YPS +L+G+
Sbjct: 265 KFTTIQNW-------SRNVINFNNKRAII-EDNAYVEWIEGSIGSMITYTYPSSVLKGDY 316
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
S Y +++SNG D+G K H+ KNT+S+IVSK ISA N YRG V + RGA +
Sbjct: 317 SRTAQYVVSLSNGPFMKDTGAKSFHVGKNTSSKIVSKSISANGGINIYRGLVRIARGAEN 376
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S CDSL++ A+T P+ ++ S ++ HEATT K+S++ LFY RGI EE A
Sbjct: 377 STATVSCDSLILDGESRAYTYPHNQNDEPSASIIHEATTGKLSEDKLFYLNARGIKEEEA 436
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
+LIV GF+ E+L+ LP E+ +K+I++ G VG
Sbjct: 437 KSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG 475
>gi|330717953|ref|ZP_08312553.1| ABC transporter component, iron regulated (putative) [Leuconostoc
fallax KCTC 3537]
Length = 419
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 173/436 (39%), Positives = 254/436 (58%), Gaps = 17/436 (3%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
ML++RL A+ + M +W AIDFD++YYY P + + DDV EL T+E
Sbjct: 1 MLDYRLRAFAAYQQMPMQTWGP-DLSAIDFDEIYYYNKP-TDQQYRDWDDVPIELKETFE 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+LG+P E++ LAG A ++S V K E +K+G+IF A+ ++PDL+
Sbjct: 59 RLGVPESERKWLAGSS-------AQYESEVVYHRMKAEFEKTGIIFTDTDTAVQKYPDLL 111
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++Y +V DN AALN+A ++ G+F+Y+PKGV + +YFRIN + GQFERTLI
Sbjct: 112 REYFGKIVKPTDNKLAALNAAAWSGGTFIYVPKGVHVTTPIQSYFRINTENEGQFERTLI 171
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I DEG++V Y+EGC+AP + LHAAVVE++ + +Y+T+QNW +Y+
Sbjct: 172 IVDEGAHVDYVEGCSAPTYSGDALHAAVVEVIVKRDGYCRYTTIQNW-------SNNVYS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
TKR + + W GS T KYP+ L GE + G SIA++ +DSG
Sbjct: 225 LETKRAYAL-DNATMEWVDGNFGSKTTMKYPAVYLNGEGARGTMLSIAVAGQGVHLDSGA 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H AKNT+S I+SK I+ YRG V R A+ + +CD++++ + A TI
Sbjct: 284 KMIHNAKNTSSSIISKSIAHDGGATDYRGTVKFGREASGAFAHVECDTIIVDDESSADTI 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PY E N LEHEA S++S+E L+Y + RGI + A +I+ GFV ++LPME+A
Sbjct: 344 PYNEILNGDVALEHEAKVSRVSEEQLYYLMTRGISAKKATEMIIMGFVEPFTKELPMEYA 403
Query: 474 VEAQKLIDISLEGSVG 489
VE +L+ + GSVG
Sbjct: 404 VELNRLMKFEMVGSVG 419
>gi|300938994|ref|ZP_07153692.1| FeS assembly protein SufB [Escherichia coli MS 21-1]
gi|300456097|gb|EFK19590.1| FeS assembly protein SufB [Escherichia coli MS 21-1]
Length = 386
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 249/386 (64%), Positives = 312/386 (80%), Gaps = 9/386 (2%)
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF
Sbjct: 10 LSKEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFG 61
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
EAI +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN +
Sbjct: 62 EAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAE 121
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
TGQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PG
Sbjct: 122 KTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPG 181
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D+ GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A++
Sbjct: 182 DNN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALT 240
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+L
Sbjct: 241 SGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSML 300
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
IG NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++
Sbjct: 301 IGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKD 360
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 361 VFSELPLEFAVEAQKLLAISLEHSVG 386
>gi|296243035|ref|YP_003650522.1| Iron-regulated ABC transporter membrane component SufB
[Thermosphaera aggregans DSM 11486]
gi|296095619|gb|ADG91570.1| Iron-regulated ABC transporter membrane component SufB
[Thermosphaera aggregans DSM 11486]
Length = 466
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 169/479 (35%), Positives = 267/479 (55%), Gaps = 19/479 (3%)
Query: 13 KIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
++D Y G +V+ + +++ ++ IS K EP+WM RL A + P
Sbjct: 5 ELDEQIYIEGVSYPKEVELRGR-ISKGLVEEISRLKKEPEWMTRHRLRALEYFEKAPMPK 63
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W +ID D++ Y + + +D+ E+ R YEKL +P + LAG+ T
Sbjct: 64 WL-TGIWSIDLDEISSYYIKPAHPKAEKWEDLPEEIRRIYEKLNLPETYAKYLAGLTT-- 120
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
V DS SV TT K+ LK GVI + + EA+ ++PD+VK+Y V P D+ +AAL+
Sbjct: 121 -----VLDSESVYTTMKDLLKDLGVIMVSMEEAVQKYPDIVKQYFGRVFPYTDHKFAALH 175
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
A+++ G FVY+P+ VR P + +F I + GQFE T+++ DE S ++++EGC+AP+
Sbjct: 176 HALWSGGVFVYVPRNVRIPYPVEAFFFIGSELEGQFEHTIVVTDENSEITFIEGCSAPRL 235
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
H +VEL A + + + TVQNW I N KRG S I W +
Sbjct: 236 KTFSFHDGMVELYAHQGSRLNFVTVQNW-------SRDIVNLNNKRGIA-ERNSLIEWIE 287
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
GS IT YPS +L+GE + + I+NG D+G+K++H A T+SR+VSK IS
Sbjct: 288 GSIGSKITITYPSTILKGEYAKTNSTVVGIANGPFIKDTGSKIVHAAPYTSSRVVSKSIS 347
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
A N YRG V V++GA +++F QC+SL++ + ++T P I + + ++ HEATT+
Sbjct: 348 AKRGINIYRGMVQVNKGAKGAKSFVQCESLILDKDSKSYTYPIIHAFENDADIAHEATTA 407
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
+IS++ LFY RG+ E +++L++ GF+R+V +LP E+ K+I + G VG
Sbjct: 408 RISEDQLFYLKSRGLSERESLSLMILGFIRDVFPRLPFEYVSMLTKVIQLEFSEMGGVG 466
>gi|307594383|ref|YP_003900700.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
gi|307549584|gb|ADN49649.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
Length = 477
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 165/459 (35%), Positives = 258/459 (56%), Gaps = 20/459 (4%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG + +D+I IS K EPDWM RL A + + +P W I+ ID + L YA P
Sbjct: 36 KGRITKDMIEEISRIKGEPDWMRRLRLRALEMFEKLPEPKWLPIK-EEIDLESLVLYAKP 94
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
S+ +S DDV E+ + YE LG+P E ++LAG + FDS V K+ L
Sbjct: 95 -SVERARSWDDVPKEIRKYYEALGMPELEAKVLAG-------LLGQFDSEVVYLHVKKYL 146
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
++ G + + EA+ ++PD+VK+Y + + P G++ +AAL+ A+++ G+FVY+P GV+ M
Sbjct: 147 EEKGAVVTTMDEAVKKYPDIVKQYFAKIFPPGEHKFAALHVALWSGGTFVYVPPGVKLDM 206
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ ++F I G GQFE +LIIADEG+ V +LEGC AP H +VE A NA +
Sbjct: 207 PIESFFLIGSSGEGQFEHSLIIADEGASVEWLEGCAAPVYRGFSFHDGMVEGYAARNAHL 266
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+ +T+QNW I NF KR S + W + GS +++ YPS +L+GE
Sbjct: 267 RINTIQNW-------SRNIINFNNKRAVAM-ENSTVEWVEGSLGSKVSYTYPSTVLKGEG 318
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ + I+NG ++G K H A T+S+IV+K +S YRG V V GA +
Sbjct: 319 AKTSIIGVTIANGPFWKENGAKAYHDAPRTSSKIVNKSVSINGGTVVYRGLVYVREGAKY 378
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+++ CDSL++ + A+TIP+ + + + HEA T +IS++ LFY RG E A
Sbjct: 379 AKSSVSCDSLILDDRSRAYTIPHDQVFEETATVTHEAYTGRISEDKLFYLRSRGFDEGTA 438
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG--SVG 489
+L+V GF++++ +LP E+A+ ++I++ VG
Sbjct: 439 RSLVVLGFIQDITVRLPTEYAMTLNRVIELEFSKLSKVG 477
>gi|15921463|ref|NP_377132.1| hypothetical protein ST1200 [Sulfolobus tokodaii str. 7]
gi|15622249|dbj|BAB66241.1| 479aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 479
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 169/463 (36%), Positives = 269/463 (58%), Gaps = 21/463 (4%)
Query: 23 FETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAID 82
F + GL++D+I IS K EP+WML RL + + + P+W +D
Sbjct: 30 FHKRV----VESGLSKDVIVEISKLKKEPEWMLRLRLKSLELFEKLPTPNWLPDFLSELD 85
Query: 83 FDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSV 142
+ Y P + + D+V PE+ + YE+LGIP EQ+ L G + A F+S
Sbjct: 86 VSKMEIYIKPD-VERTSNWDEVPPEIRKYYEQLGIPQSEQQYLGG-------LVATFESE 137
Query: 143 SVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFV 202
S+ + K+EL K GVI MP EAI ++PD++K+Y + + PV D+ +AAL+ A+++ G FV
Sbjct: 138 SIYSNVKQELAKKGVIMMPPEEAIQKYPDIIKEYFTKIFPVSDHKFAALHGALWSGGVFV 197
Query: 203 YIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
Y+PKGV+ + +F I + GQFE TLIIADEGSY+ ++EGC+APQ + H +V
Sbjct: 198 YVPKGVKITTPVEGFFIIGSEMEGQFEHTLIIADEGSYIHFIEGCSAPQFKKFSFHDGMV 257
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
EL A NA IK++TVQNW + NF KR S + W + GS ++
Sbjct: 258 ELYAKKNAYIKFTTVQNW-------SKNVINFNNKR-AWADENSTVEWVEGSLGSKYSFV 309
Query: 323 YPSCLLRGEQSCGEFYSIAISNG-FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YPS +LRG + + +++G + DSG+KM+H A NT S++++K I N YR
Sbjct: 310 YPSTILRGRNASSTSLVVTLASGEGEWKDSGSKMIHAAPNTKSKVINKNIGFNGGVNIYR 369
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + V++GA ++ F +CDSL++ A+T P+ + ++ HEA T +++++ LFY
Sbjct: 370 GLIRVNKGATGAKAFVKCDSLMLDEKTKAYTFPHNQVFEEDADVAHEAHTFRMNEDQLFY 429
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ RGI E+ +++++V GF+ E++++LP E+A K+I + L
Sbjct: 430 LMNRGIDEKESVSMLVLGFIDEIMKELPFEYATMLNKVIKLEL 472
>gi|227827569|ref|YP_002829349.1| FeS assembly protein SufB [Sulfolobus islandicus M.14.25]
gi|227830256|ref|YP_002832036.1| FeS assembly protein SufB [Sulfolobus islandicus L.S.2.15]
gi|229579081|ref|YP_002837479.1| FeS assembly protein SufB [Sulfolobus islandicus Y.G.57.14]
gi|229584772|ref|YP_002843274.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.27]
gi|238619726|ref|YP_002914552.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.4]
gi|284997679|ref|YP_003419446.1| FeS assembly protein SufB [Sulfolobus islandicus L.D.8.5]
gi|227456704|gb|ACP35391.1| FeS assembly protein SufB [Sulfolobus islandicus L.S.2.15]
gi|227459365|gb|ACP38051.1| FeS assembly protein SufB [Sulfolobus islandicus M.14.25]
gi|228009795|gb|ACP45557.1| FeS assembly protein SufB [Sulfolobus islandicus Y.G.57.14]
gi|228019822|gb|ACP55229.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.27]
gi|238380796|gb|ACR41884.1| FeS assembly protein SufB [Sulfolobus islandicus M.16.4]
gi|284445574|gb|ADB87076.1| FeS assembly protein SufB [Sulfolobus islandicus L.D.8.5]
gi|323474620|gb|ADX85226.1| FeS assembly protein SufB [Sulfolobus islandicus REY15A]
gi|323477352|gb|ADX82590.1| FeS assembly protein SufB [Sulfolobus islandicus HVE10/4]
Length = 479
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 163/451 (36%), Positives = 262/451 (58%), Gaps = 17/451 (3%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL+ I IS K EP+WML+ RL + + P+W ++D L Y P
Sbjct: 38 GLSRSTIEEISRIKKEPEWMLKLRLKGLELFEKLPTPNWLPDVLSSLDISALELYVKP-G 96
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ QS +++ PE+ + Y++LGIP E++ L G + AV +S + + K EL K
Sbjct: 97 VDKAQSWEELPPEIRKYYDELGIPESEKKFLGG-------LVAVLESEPIYSNVKVELMK 149
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV+ +PI EA+ ++PDL+K+Y + P D+ +AAL+ A+++ G FVY+PK V+ +
Sbjct: 150 KGVVMLPIDEAVNKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVKITTPV 209
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+F I + GQFE TL+IADEGSY+ ++EGCTAPQ + H +VEL A NA IK+
Sbjct: 210 EGFFVIGSELEGQFEHTLLIADEGSYIHFIEGCTAPQLKKYSFHDGMVELYAKKNAYIKF 269
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+T+QNW + NF KR S + W + GS ++ YPS +LRG+ +
Sbjct: 270 TTIQNW-------SKNVINFNNKR-AWADENSTVEWVEGSLGSKYSFVYPSTILRGKNAS 321
Query: 335 GEFYSIAISNG-FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ +++G + DSG+KM+H A T S++V+K I N YRG + V++GA S
Sbjct: 322 STSLVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLIKVNKGAVGS 381
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ F +CDSL++ + A+T P+ + ++ HEA T +++++ LFY + RGI E+ A
Sbjct: 382 KAFVKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEAT 441
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+++V GF+ E++++LP E+A K+I + L
Sbjct: 442 SMLVLGFIDEIMKELPFEYATMLNKVIKLEL 472
>gi|15897812|ref|NP_342417.1| hypothetical protein SSO0927 [Sulfolobus solfataricus P2]
gi|284175615|ref|ZP_06389584.1| hypothetical protein Ssol98_13305 [Sulfolobus solfataricus 98/2]
gi|13814109|gb|AAK41207.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602515|gb|ACX92118.1| FeS assembly protein SufB [Sulfolobus solfataricus 98/2]
Length = 479
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 164/451 (36%), Positives = 262/451 (58%), Gaps = 17/451 (3%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL+ I IS K EP+WML+ RL + + P+W ++D L Y P
Sbjct: 38 GLSRSTIEEISRIKKEPEWMLKLRLKGLELFEKLPTPNWLPDVLSSLDISALELYVKP-G 96
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ QS +++ PE+ + Y++LGIP E++ L G + AV +S + + K EL K
Sbjct: 97 VDKAQSWEELPPEIRKYYDELGIPESEKKFLGG-------LVAVLESEPIYSNVKIELMK 149
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV+ +PI EA+ ++PDL+K+Y + P D+ +AAL+ A+++ G FVY+PK V+ +
Sbjct: 150 KGVVMLPIDEAVSKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVKITTPV 209
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+F I + GQFE TL+IADEGSY+ ++EGCTAPQ + H +VEL A NA IK+
Sbjct: 210 EGFFVIGSELEGQFEHTLLIADEGSYIHFIEGCTAPQLKKYSFHDGMVELYAKKNAYIKF 269
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+T+QNW + NF KR S + W + GS ++ YPS +LRG+ +
Sbjct: 270 TTIQNW-------SKNVINFNNKR-AWADENSTVEWVEGSLGSKYSFVYPSTILRGKNAS 321
Query: 335 GEFYSIAISNG-FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ +++G + DSG+KM+H A T S++V+K I N YRG V V++GA S
Sbjct: 322 STSLVVTMTSGEGEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLVKVNKGAVGS 381
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ F +CDSL++ + A+T P+ + ++ HEA T +++++ LFY + RGI E+ A
Sbjct: 382 KAFVKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEAT 441
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+++V GF+ E++++LP E+A K+I + L
Sbjct: 442 SMLVLGFIDEIMKELPFEYATMLNKVIKLEL 472
>gi|331657657|ref|ZP_08358619.1| FeS assembly protein SufB [Escherichia coli TA206]
gi|331055905|gb|EGI27914.1| FeS assembly protein SufB [Escherichia coli TA206]
Length = 373
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 247/382 (64%), Positives = 310/382 (81%), Gaps = 9/382 (2%)
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ +E+LG+P+RE + +VAVDA+FDSVSV TT++++L + G+IF EAI
Sbjct: 1 MEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYRKKLAEQGIIFCSFGEAIH 52
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + TGQ
Sbjct: 53 DHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQ 112
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
FERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 113 FERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNN- 171
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G Q
Sbjct: 172 TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQ 231
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
Q D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG N
Sbjct: 232 QADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGAN 291
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V +
Sbjct: 292 CGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSE 351
Query: 468 LPMEFAVEAQKLIDISLEGSVG 489
LP+EFAVEAQKL+ ISLE SVG
Sbjct: 352 LPLEFAVEAQKLLAISLEHSVG 373
>gi|212223999|ref|YP_002307235.1| hypothetical protein TON_0850 [Thermococcus onnurineus NA1]
gi|212008956|gb|ACJ16338.1| hypothetical protein TON_0850 [Thermococcus onnurineus NA1]
Length = 475
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 178/459 (38%), Positives = 268/459 (58%), Gaps = 19/459 (4%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG L D+I +S KNEP+WML RL A + + P W + +D + L Y+ P
Sbjct: 33 KGELTRDMIEELSRIKNEPEWMLRHRLKALELFHKLPMPKW-VVGVEELDLESLTLYSKP 91
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
+ + +D+ + RT+E+L IP E++ L+G + AVFDS SV + K E
Sbjct: 92 EIGNEVRDWEDLPENIRRTFERLNIPEIEKKFLSG-------LTAVFDSESVYSNLKAEF 144
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
+K G+I +P+ EA+ ++PDLVK+Y V P G++ ++AL+ A+++ G F+Y+PKGVR P
Sbjct: 145 EKMGIIMLPMEEAVQKYPDLVKRYFGRVFPAGEHKFSALHHALWSGGVFIYVPKGVRIPF 204
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ +F I GQFE TL++ADEGSY+ ++EGC+AP H +VE+ A A +
Sbjct: 205 PVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCSAPMYKGFSFHDGMVEIYAHKGATV 264
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
K++T+QNW + NF KR + + W + GS IT+ YPS +L+GE
Sbjct: 265 KFTTIQNW-------SRNVINFNNKRAII-EENAYVEWIEGSIGSKITYTYPSSVLKGEG 316
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ Y +++SNG D+G K HLA NT+S+IVSK ISA N YRG V + +GA +
Sbjct: 317 ARTAQYVVSLSNGPFMKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRILKGAKN 376
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S CDSL++ A+T P+ ++ S ++ HEATT K+ ++ LFY RGI EE A
Sbjct: 377 STATVSCDSLILDEESKAYTYPHNQNDEPSASIIHEATTGKLGEDKLFYMNSRGIGEEEA 436
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
+LIV GF+ E+L+ LP E+ +K+I++ G VG
Sbjct: 437 KSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG 475
>gi|229582178|ref|YP_002840577.1| FeS assembly protein SufB [Sulfolobus islandicus Y.N.15.51]
gi|228012894|gb|ACP48655.1| FeS assembly protein SufB [Sulfolobus islandicus Y.N.15.51]
Length = 479
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 163/451 (36%), Positives = 262/451 (58%), Gaps = 17/451 (3%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL+ I IS K EP+WML+ RL + + P+W ++D L Y P
Sbjct: 38 GLSRSTIEEISRIKKEPEWMLKLRLKGLELFEKLPTPNWLPDVLSSLDISALELYVKP-G 96
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ QS +++ PE+ + Y++LGIP E++ L G + AV +S + + K EL K
Sbjct: 97 VDKAQSWEELPPEIRKYYDELGIPESEKKFLGG-------LVAVLESEPIYSNVKVELMK 149
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV+ +PI EA+ ++PDL+K+Y + P D+ +AAL+ A+++ G FVY+PK V+ +
Sbjct: 150 KGVVMLPIDEAVNKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVKITTPV 209
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+F I + GQFE TL+IADEGSY+ ++EGCTAPQ + H +VEL A NA IK+
Sbjct: 210 EGFFVIGSELEGQFEHTLLIADEGSYIHFIEGCTAPQLKKYSFHDGMVELYAKKNAYIKF 269
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+T+QNW + NF KR S + W + GS ++ YPS +LRG+ +
Sbjct: 270 TTIQNW-------SKNVINFNNKR-AWADENSTVEWVEGSLGSKYSFVYPSTILRGKNAS 321
Query: 335 GEFYSIAISNGF-QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ +++G + DSG+KM+H A T S++V+K I N YRG + V++GA S
Sbjct: 322 STSLVVTMTSGESEWKDSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLIKVNKGAVGS 381
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ F +CDSL++ + A+T P+ + ++ HEA T +++++ LFY + RGI E+ A
Sbjct: 382 KAFVKCDSLMLDDKTKAYTYPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEAT 441
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+++V GF+ E++++LP E+A K+I + L
Sbjct: 442 SMLVLGFIDEIMKELPFEYATMLNKVIKLEL 472
>gi|146304420|ref|YP_001191736.1| FeS assembly protein SufB [Metallosphaera sedula DSM 5348]
gi|145702670|gb|ABP95812.1| Iron-regulated ABC transporter membrane component SufB
[Metallosphaera sedula DSM 5348]
Length = 483
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 165/466 (35%), Positives = 263/466 (56%), Gaps = 21/466 (4%)
Query: 20 KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYP 79
++ F I GL + I IS K EP+WML RL + + + P+W
Sbjct: 31 QHEFHRRI----VESGLTKSTIEEISKIKKEPEWMLRLRLKSLELFEKIPTPNWLPDVLG 86
Query: 80 AIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVF 139
+++ L Y P + + D + E+ Y+ LGIP E++ L G + AVF
Sbjct: 87 SLNVSSLELYVKPD-VDQTNNWDQIPKEIRDYYDVLGIPESEKKYLGG-------LVAVF 138
Query: 140 DSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG 199
+S + + KEEL K GVI MP +A+ ++PD +K Y + P D+ +AAL+ A+++ G
Sbjct: 139 ESEPIYSNVKEELTKKGVIMMPPEDALRKYPDFMKDYFMKIFPASDHKFAALHGALWSGG 198
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
FVY+PKGV+ + +F I + GQFE TLI+ADEGSY+ ++EGC+APQ + H
Sbjct: 199 VFVYVPKGVKITTPVEGFFIIGREMEGQFEHTLIVADEGSYLHFIEGCSAPQLRKFSFHD 258
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
+VEL A NA+IK++T+QNW + NF KR + I W + GS
Sbjct: 259 GMVELYAKRNAKIKFTTIQNW-------SKNVINFNNKR-AWADESANIEWVEGSLGSKY 310
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNG-FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
++ YP+ +LRG+ + + +++G + DSG+KM+H A NT S+IV+K I G N
Sbjct: 311 SFVYPTTILRGQNASSTSLVVTLASGEGEWKDSGSKMIHAAPNTKSKIVNKNIGFGGGVN 370
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
YRG + V++GA ++ F +CDSL++ A+T P+ + ++ HEA T ++S++
Sbjct: 371 IYRGLIKVNKGAKGAKAFVKCDSLMLDERTKAYTFPHNQVLEDDADVAHEAHTFRMSEDQ 430
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
LFY + RGI E+ A +++V GF+ E++++LP E+A K+I + L
Sbjct: 431 LFYLMNRGIGEKEATSMLVLGFIDEIMKELPFEYATMLNKVIKLEL 476
>gi|297526698|ref|YP_003668722.1| FeS assembly protein SufB [Staphylothermus hellenicus DSM 12710]
gi|297255614|gb|ADI31823.1| FeS assembly protein SufB [Staphylothermus hellenicus DSM 12710]
Length = 471
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 171/489 (34%), Positives = 269/489 (55%), Gaps = 21/489 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ ++ + I+ +Y E +++ K + D++ IS +K EPDWM RL A
Sbjct: 1 MTRPIEISKIIEHPEYMEPIEYRGKIEIRGK-ITRDLVEEISRQKKEPDWMRRLRLRALE 59
Query: 64 RWLTMKDPSWARIRYPAIDFDDLY-YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ + P W +ID +++ YY P +D+ E+ Y +LG+P
Sbjct: 60 YFEKLPLPKWLY-GIESIDLEEITTYYVKPLEQPASN-WEDLPAEIREIYLRLGLPDAYA 117
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG+ T V DS + + K+ LKK GVI +P+ +AI ++PDLVKKY +V
Sbjct: 118 KYLAGLTT-------VLDSETAYSAMKDYLKKIGVIMIPMEQAIRKYPDLVKKYFGKIVG 170
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
++ +AAL+ A+++ G FVY+PK V+ P + +F + ++ GQFE +LI+ADEGS ++
Sbjct: 171 PIEHKFAALHYALWSGGVFVYVPKNVKVPYPVEAFFFVGKELEGQFEHSLIVADEGSELT 230
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
++EGC+AP+ + H VEL A A+I + TVQNW I NF KR
Sbjct: 231 FIEGCSAPRFKKFSFHDGAVELYAHRKAKISFITVQNW-------SRNIINFNNKRAIA- 282
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
S + W + GS T YPS +LRG+ + + I+NG D+G+K +H A NT
Sbjct: 283 EEDSYVEWLEGSIGSKYTVTYPSTILRGKGARTSSLVVGIANGPYIKDTGSKAIHAAPNT 342
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S+I+SK IS+ N YRG V + +GA +S ++ QCDSL++ A+T P I +
Sbjct: 343 KSKIISKSISSEGGVNIYRGLVHIFKGAKNSTSYVQCDSLILDEKSKAYTYPIIHVEEKD 402
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
HEATT +I+D+ +FY RG+ E A ++IV G++++VL+ LPME+ ++I +
Sbjct: 403 SETGHEATTGRINDDQIFYLQSRGLSEGQAKSMIVLGYIKDVLKGLPMEYVAMLNRVIQL 462
Query: 483 SLE--GSVG 489
E G VG
Sbjct: 463 EFERIGGVG 471
>gi|330834434|ref|YP_004409162.1| FeS assembly protein SufB [Metallosphaera cuprina Ar-4]
gi|329566573|gb|AEB94678.1| FeS assembly protein SufB [Metallosphaera cuprina Ar-4]
Length = 483
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 157/451 (34%), Positives = 256/451 (56%), Gaps = 17/451 (3%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL + IS K EP+WML RL + + + P+W +++ L Y P
Sbjct: 42 GLTRSTVEEISKIKREPEWMLRLRLKSLELFEKIPTPNWLPDFLGSLNVSSLELYVKPD- 100
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ S D + E+ Y+ LGIP E++ L G + AVF+S + + KEEL K
Sbjct: 101 VDQTSSWDQIPKEVRDYYDVLGIPESEKKYLGG-------LVAVFESEPIYSNVKEELTK 153
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI MP +A+ ++PD +K Y + P D+ +AAL+ A+++ G FVY+P+GV+ +
Sbjct: 154 KGVIMMPPEDALKKYPDFMKDYFMKIFPASDHKFAALHGALWSGGVFVYVPRGVKITTPV 213
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+F I ++ GQFE TLI+ +E SY+ ++EGC+APQ + H +VEL A ++IK+
Sbjct: 214 EGFFIIGKEMEGQFEHTLIVTEEDSYLHFIEGCSAPQLRKFSFHDGMVELYAKKGSKIKF 273
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+T+QNW + NF KR + I W + GS ++ YP+ +LRG +
Sbjct: 274 TTIQNW-------SKNVINFNNKR-AWADENANIEWVEGSLGSKYSFVYPTTILRGPNAS 325
Query: 335 GEFYSIAISNG-FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ +++G + DSG+KM+H A NT S+IV+K I G N YRG + V++GA+ +
Sbjct: 326 STSLVVTLASGEGEWKDSGSKMIHAAPNTKSKIVNKNIGFGGGVNIYRGLIKVNKGASGA 385
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ F +CDSL++ A+T P+ + ++ HEA T ++S++ LFY + RGI E+ A
Sbjct: 386 KAFVKCDSLMLDEKTKAYTFPHNQVLEDDADVAHEAHTFRMSEDQLFYLMNRGIGEKEAT 445
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+++V GF+ E++++LP E+A K+I + L
Sbjct: 446 SMLVLGFIDEIMKELPFEYATMLNKVIKLEL 476
>gi|320100370|ref|YP_004175962.1| Iron-regulated ABC transporter membrane component SufB
[Desulfurococcus mucosus DSM 2162]
gi|319752722|gb|ADV64480.1| Iron-regulated ABC transporter membrane component SufB
[Desulfurococcus mucosus DSM 2162]
Length = 468
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 178/487 (36%), Positives = 281/487 (57%), Gaps = 26/487 (5%)
Query: 8 VDKVRKIDVDQYK-YGFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
V+ + ++ + + + I++ KG ++ DI+ IS K EP+WM RL A +
Sbjct: 3 VELSKSLEHGEMEPAEYRKEIEL----KGRISRDIVEEISRLKKEPEWMRLHRLRALEEF 58
Query: 66 LTMKDPSWARIRYPAIDFDDL-YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ P+W +ID D++ YY P++ G S +++ E+ R Y+ LG+P +
Sbjct: 59 YRLPSPNWLPW-IRSIDLDEVASYYVKPET-TGASSFEELPDEIRRIYDALGLPEAYAKY 116
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
LAG+ T V DS +V T K+ LK+ GV+ +P+ EA+ ++PD+VKKY V P
Sbjct: 117 LAGLST-------VLDSENVYTVMKDLLKELGVVMVPMDEAVQKYPDMVKKYFGRVFPYT 169
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ A+++ G FVY+PKGVR P + +F I + GQFE T+++ADEGS ++++
Sbjct: 170 DHKFAALHHALWSGGVFVYVPKGVRVPYPVEAFFFIGSELEGQFEHTVVVADEGSEITFI 229
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + H +VEL A A + + TVQNW I NF KRG
Sbjct: 230 EGCSAPRLKKFSFHDGMVELYAHKEARVNFVTVQNW-------SRNIVNFNNKRGIA-EE 281
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ I W + GS +T YP+ +L+G + I ISNG D+G+K++H A +T+S
Sbjct: 282 NAVIEWIEGSIGSKVTVTYPTTILKGRGARTASTVIGISNGDTVKDTGSKVIHAAPSTSS 341
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
RIVSK IS N YRG + V++GA++S+++TQCDSL++ + T P I +
Sbjct: 342 RIVSKSISGRGGVNVYRGLIQVNKGASNSKSYTQCDSLILDEKSSSSTYPIIHVMEEDAD 401
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEATT +++D+ LFY RG+ E+ A++LIV GFV+++ +LP E+ K+I +
Sbjct: 402 IGHEATTIRVTDDQLFYLASRGLSEKEALSLIVLGFVKDIFPRLPFEYVAMLSKVIQLEF 461
Query: 485 E--GSVG 489
G VG
Sbjct: 462 RELGGVG 468
>gi|313895742|ref|ZP_07829298.1| FeS assembly protein SufB [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975868|gb|EFR41327.1| FeS assembly protein SufB [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 420
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 144/421 (34%), Positives = 237/421 (56%), Gaps = 17/421 (4%)
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P W +D D + Y P + + ++V ++ T+++LGIP E+ LAG
Sbjct: 17 GTPPWGP-DLSDLDMDHIVTYVQPDAKMVGD-WNEVPEDIKETFDRLGIPEAEKTSLAG- 73
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V A +DS V + +E L K GV++ + A+ E+ D+V++Y T+VP + +
Sbjct: 74 ------VGAQYDSEVVYHSIQESLVKQGVVYTDMETALQEYGDVVRQYFMTLVPPKAHKF 127
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AAL+ AV++ GSFVY+P+G++ + L +YFR+N G GQFE TLII ++G+ + ++EGC+
Sbjct: 128 AALHGAVWSGGSFVYVPEGIKVDIPLQSYFRLNAAGAGQFEHTLIIVEKGASLHFIEGCS 187
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
AP+ + LHA VEL + A ++YST++NW + N TKR + +
Sbjct: 188 APKYNVTNLHAGCVELFVKEGARLRYSTIENW-------SRNMMNLNTKRVKVEKDGA-V 239
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
W GS ++ YP+ +L GE + EF I + Q++D+G ++ A +T++ I +
Sbjct: 240 EWVSGSFGSHVSMLYPTSILSGENASCEFTGITFALKGQELDTGATVIFDAPHTSANIST 299
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
+ IS YR V V A ++ C+SL++ + + T+P ++ ++ HE
Sbjct: 300 RSISKSGGIAVYRSAVKVTPRAVGAKCSVDCESLMLDSESRSDTLPVMDIACDQVDIGHE 359
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A +ISDE +FY RGI EE A A+IV GFV + ++LP+E+AVE L++I LEG++
Sbjct: 360 AKIGRISDEAIFYLTSRGIDEEEARAMIVRGFVEPIAKELPLEYAVEMNNLVNIELEGTM 419
Query: 489 G 489
G
Sbjct: 420 G 420
>gi|323219078|gb|EGA03583.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
Length = 432
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 246/441 (55%), Positives = 318/441 (72%), Gaps = 24/441 (5%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCNLE 426
+CGAHT PY+E +N+S LE
Sbjct: 412 ADCGAHTFPYVECRNNSAQLE 432
>gi|22327564|ref|NP_680390.1| ATP-binding-cassette transporter, putative [Arabidopsis thaliana]
gi|122214062|sp|Q3E8H7|AB9I_ARATH RecName: Full=Putative UPF0051 protein ABCI9; AltName: Full=ABC
transporter I family member 9; Short=ABC transporter
ABCI.9; Short=AtABCI9
gi|332007712|gb|AED95095.1| putative UPF0051 protein ABCI9 [Arabidopsis thaliana]
Length = 470
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 229/493 (46%), Positives = 296/493 (60%), Gaps = 86/493 (17%)
Query: 5 RETVDKVRK-IDVDQY--KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E DK+++ Y KYGF NI PKGL+E+ IR IS K EP W+LE+RL A
Sbjct: 56 TEPSDKLQQYFQNQDYDKKYGFLENIDSFTIPKGLSEETIRLISKLKKEPAWILEYRLKA 115
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDV----DPELLRTYEKLGI 117
Y ++L +++P W+ RYP +D D+ +Y+APK S D DP+LL +++L +
Sbjct: 116 YAKFLKLEEPKWSDNRYPLLDLQDMCFYSAPKKKPTLNSSDIADEADDPKLLEEFDRLDV 175
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P+ +++ + KVAVDAV++S S+ T KE L+KSGVIF ISEAI ++PDL+KKYL
Sbjct: 176 PLTKKKKCS----PKVAVDAVYNSESIAITNKEPLEKSGVIFCSISEAIRKYPDLIKKYL 231
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KGTGQFERTLIIAD 236
VVP DN+YAALN+AVF+DGSF YIPK RCPM LS+YFR+N + TGQFERTLI+A+
Sbjct: 232 GRVVPSDDNYYAALNTAVFSDGSFCYIPKNTRCPMPLSSYFRMNSIENTGQFERTLIVAE 291
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EGS+V Y EGCTA D+NQLHAAVVEL + AEIKYST
Sbjct: 292 EGSFVEYSEGCTAISHDKNQLHAAVVELYCAEGAEIKYST-------------------- 331
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
RG C G RSKISWTQ+E G AITWKYPS +L G+ S GE
Sbjct: 332 -RGLCAGDRSKISWTQVEKGFAITWKYPSVVLEGDDSVGE-------------------- 370
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
A ++RN + CDS+LIG+N A+T PYI
Sbjct: 371 ---------------------------------AENARNTSTCDSMLIGDNAAANTYPYI 397
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ KN S +EHEA+TSKI ++ +FY QRGI E A+A +++GF R+V KLP EF E
Sbjct: 398 QVKNPSARIEHEASTSKIGEDQIFYFQQRGIDHERALAAMISGFCRDVFNKLPNEFGAEV 457
Query: 477 QKLIDISLEGSVG 489
+L+ I LEGSVG
Sbjct: 458 NQLLSIKLEGSVG 470
>gi|332159232|ref|YP_004424511.1| hypothetical protein PNA2_1592 [Pyrococcus sp. NA2]
gi|331034695|gb|AEC52507.1| hypothetical protein PNA2_1592 [Pyrococcus sp. NA2]
Length = 475
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 172/464 (37%), Positives = 268/464 (57%), Gaps = 19/464 (4%)
Query: 28 QVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY 87
+V+ K + + I +S K EP+WM RL A + + P W + +D ++L
Sbjct: 29 EVEIRGK-ITKSTIEELSKIKGEPEWMKRHRLRALELFEKLPMPKWL-VGIEELDLENLV 86
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
Y+ P+ + D+ + +T+E+L IP E+ L+G + AVFDS SV +
Sbjct: 87 IYSKPEIDREVKDWSDLPENIRKTFERLNIPEIEKRFLSG-------LTAVFDSESVYSK 139
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
KEE K+ G+I +P+ EA+ ++P++++ Y + P G++ ++AL+ A+++ G+FVYIPKG
Sbjct: 140 LKEEFKRKGIIMIPMEEAVKKYPNVIRNYFGKIFPAGEHKFSALHHALWSGGAFVYIPKG 199
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ P + +F I GQFE TLIIADEGSYV ++EGC+AP E H +VE+
Sbjct: 200 LEVPFPIEAFFIIGSALEGQFEHTLIIADEGSYVHFIEGCSAPMYKEFSFHDGMVEIYVH 259
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
NA +K++T+QNW + NF KR + W + GS IT+ YPS +
Sbjct: 260 KNATVKFTTIQNW-------SRNVINFNNKRAIV-EKNGYVEWIEGSIGSRITYTYPSSV 311
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L+GE + Y ++++NG D+G K HLA NT+S+IVSK ISA N YRG V +
Sbjct: 312 LKGEGARTAQYVVSLTNGPYLKDTGAKTWHLAPNTSSKIVSKSISASGGVNIYRGLVRIV 371
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
+GA +S CDSL++ A+T P+ ++ + ++ HEATT K+S++ LFY RGI
Sbjct: 372 KGAKNSTATVSCDSLILDEKSKAYTYPHNQNDEPTGSIIHEATTGKLSEDKLFYMKSRGI 431
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
EE A +LIV GF+ E+L+ LP+E+ +K+I++ G VG
Sbjct: 432 SEEEAKSLIVLGFISEILEDLPLEYVEVLKKVIELEFSEVGGVG 475
>gi|70607145|ref|YP_256015.1| hypothetical protein Saci_1389 [Sulfolobus acidocaldarius DSM 639]
gi|68567793|gb|AAY80722.1| universally conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 479
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 166/451 (36%), Positives = 262/451 (58%), Gaps = 17/451 (3%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL++D+I IS K EP+WML RL + + + P+W A+D + Y P
Sbjct: 38 GLSKDVIAEISKVKKEPEWMLRLRLKSLELFEKIPTPNWLPDFLSALDISKMEIYVKPD- 96
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ + PE+ + YE++G+P EQ+ L G + A F+S + + K+EL+K
Sbjct: 97 VERTSDWSQIPPEIRQYYEQIGVPQSEQKYLGG-------LVATFESEPIYSNVKKELQK 149
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI MP EA+ ++PD+VK+Y + + PV D+ +AAL+ A+++ G FVY+PKGV+ M +
Sbjct: 150 KGVIMMPPEEAVQKYPDIVKEYFTRIFPVSDHKFAALHGALWSGGVFVYVPKGVKITMPV 209
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+F I + GQFE TL+IADEGSY+ ++EGC+APQ + H +VEL A NA IK+
Sbjct: 210 EGFFIIGGEMEGQFEHTLLIADEGSYIHFIEGCSAPQLKKFSFHDGMVELYAKKNAYIKF 269
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+T+QNW I NF KR S + W + GS ++ YPS +LRG+ +
Sbjct: 270 TTIQNW-------SKDIINFNNKR-AWADENSTVEWVEGSLGSRYSFVYPSTILRGKGAS 321
Query: 335 GE-FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
S + DSG+KM+H A T S++VSK I N YRG + V++GA S
Sbjct: 322 STSLVVTFTSGEGEWKDSGSKMIHAAPYTKSKVVSKNIGFRGGLNVYRGLIRVNKGAVGS 381
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ F +CDSL++ A+T P+ + ++ HEA T +++++ LFY + RGI E+ A+
Sbjct: 382 KAFVKCDSLMLDEKTKAYTFPHNQVFEEDADVAHEAHTFRMNEDQLFYLMTRGIDEKEAV 441
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+++V GF+ E+++++P E+A K+I + L
Sbjct: 442 SMLVLGFIDEIMKEMPFEYATMLNKVIKLEL 472
>gi|213611285|ref|ZP_03370111.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 430
Score = 385 bits (988), Expect = e-104, Method: Composition-based stats.
Identities = 245/439 (55%), Positives = 316/439 (71%), Gaps = 24/439 (5%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG
Sbjct: 352 HQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIG 411
Query: 406 NNCGAHTIPYIESKNSSCN 424
+CGAHT PY+E +N+S
Sbjct: 412 ADCGAHTFPYVECRNNSAQ 430
>gi|193875746|gb|ACF24509.1| chloroplast iron sulfur assembly protein SufB [Gymnochlora
stellata]
Length = 489
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 229/474 (48%), Positives = 318/474 (67%), Gaps = 15/474 (3%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
D+YKY F++ + + PK L++ I+ IS K EP W+ ++R+ +++ M P W+
Sbjct: 31 QDEYKYKFKSFSENETIPKMLSKRTIKSISLKNLEPLWITKFRIKSFKFLYLMNYPMWSE 90
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
Y +++ YY+A + +L + E +T K + A+
Sbjct: 91 SNYIFKKQENIVYYSA--VLQKSSNLKKMMLEPNKTESKGAL-------------KNTAI 135
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
D V DS+SV T++++EL K G++F ++I ++PDL+ +L +VV + DN++ LNSAV
Sbjct: 136 DVVLDSISVATSYQKELNKHGILFSNFFDSIKKYPDLISTFLGSVVSIRDNYFTCLNSAV 195
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F++GSFVY+PK PM+LSTYFRIN TGQFERTLII + S VSYLEGCTAP +
Sbjct: 196 FSEGSFVYVPKNTTSPMDLSTYFRINGNITGQFERTLIITEPSSRVSYLEGCTAPFYSKA 255
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVEL+A + + IKYSTVQNWYPGDS+G GGI N+VTKRG C G RSKISWTQ+ET
Sbjct: 256 QLHAAVVELLAFEQSNIKYSTVQNWYPGDSKGSGGILNYVTKRGLCLGDRSKISWTQVET 315
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS+ TWKYPS +L+G++S GEFYSIAI+ Q+ D+GTKM+H+ NT S+I+SKGIS G
Sbjct: 316 GSSYTWKYPSVVLKGDKSIGEFYSIAITKLLQKADTGTKMIHIGSNTKSKIISKGISLGN 375
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S N YRG V +H + S N TQCDS+++G++ A+T PYI + S ++EHEAT +KI
Sbjct: 376 SRNCYRGLVLIHNNSNKSINNTQCDSIIVGSSSSANTYPYIMIREPSSSIEHEATIAKIK 435
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
DE LFY QR I E AI+LIV+GF +EV+++LP EF E +L++ S +G
Sbjct: 436 DEQLFYIQQRCIDVEEAISLIVSGFCKEVIEELPFEFLSEVNELLNSSFVTKIG 489
>gi|227872644|ref|ZP_03990975.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Oribacterium sinus F0268]
gi|227841508|gb|EEJ51807.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Oribacterium sinus F0268]
Length = 427
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 249/444 (56%), Gaps = 19/444 (4%)
Query: 4 VRETVDKVRKIDVDQYKYGFE-TNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ + +V+ ID Y + +E + K +GL +I+ IS KKN+P WM ++RL A
Sbjct: 1 MAKERTEVQDIDRSLYDFRYEEKDSDFYKIKEGLTPEIVEEISDKKNDPQWMRDFRLKAL 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ P+W ++ D++ Y PK+ + ++V ++ T+EKLGIP E+
Sbjct: 61 EVYHKTDIPNWGP-DISDLNMDNIVTYVKPKTKMSAD-WEEVPEDIKNTFEKLGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVV 181
+ LAG V A +DS V +EE+ GV++ I A+ + ++++K+ +V
Sbjct: 119 KSLAG-------VGAQYDSELVYHNLQEEVAAKGVVYSDIESALHGPYGEMIEKHFMKLV 171
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
P D+ +AAL+ AV++ GSFVY+PKGV + L +YFR+N G GQFE TLII DEG+ +
Sbjct: 172 PPTDHKFAALHGAVWSGGSFVYVPKGVNVEIPLQSYFRLNAPGAGQFEHTLIIVDEGAEL 231
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++EGC+AP+ + LHA VEL NA+++YST++NW +YN TKR
Sbjct: 232 HFIEGCSAPKYNVANLHAGCVELFVGKNAKLRYSTIENW-------SKNMYNLNTKRARV 284
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ W GS I++ YP +L+G+ + EF + + Q +D+G KM+H+ K+
Sbjct: 285 -EENGIMEWVSGSFGSHISYLYPMTILKGDNARAEFTGVTFAGAGQNLDTGAKMVHIGKD 343
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
T+S I ++ IS +TYR V + A ++++ C SL++ + + T+P I+ + +
Sbjct: 344 TSSYINTRSISKSGGISTYRSAVVIQNQAKNAKSAVSCQSLMLDDQSRSDTVPAIDVRTN 403
Query: 422 SCNLEHEATTSKISDEHLFYCLQR 445
++ HEA +ISDE +FY + R
Sbjct: 404 QADVGHEAKIGRISDEAVFYLMSR 427
>gi|14601570|ref|NP_148110.1| FeS assembly protein SufB [Aeropyrum pernix K1]
gi|5105391|dbj|BAA80704.1| FeS assembly protein SufB [Aeropyrum pernix K1]
Length = 476
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 167/486 (34%), Positives = 277/486 (56%), Gaps = 19/486 (3%)
Query: 1 MVAVRE-TVDKVRKIDVDQYKYGFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWR 58
M + E + +R +D+ + G E ++ + +G + I IS K EP+WM R
Sbjct: 1 MGEMVELKKELLRDVDLAERLLGRERPVKSEIEIRGKITRSTIEEISRIKKEPEWMKRLR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L + + + P W + ID D++ Y+ P++ +++ E+ YE+LG+P
Sbjct: 61 LRSLELFYKLPTPKWL-VGIDVIDLDEMIVYSKPETERASS-WEELPKEIREFYERLGLP 118
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
E L+G + AVFDS +V K+ L++ GVI MPI EA+ ++PDLVK+Y
Sbjct: 119 EIEARFLSG-------LSAVFDSETVYARVKKYLEEKGVIVMPIEEAVQKYPDLVKRYFM 171
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
V P D+ +AAL+ A+++ G+F+Y+P+GV+ + ++F I + G GQFE +LI+ADEG
Sbjct: 172 RVFPPSDHKFAALHGALWSGGTFIYVPRGVKIREPIESFFLIGKSGEGQFEHSLIVADEG 231
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+YV ++EGC+AP+ + H +VE A NA IK TVQNW + N KR
Sbjct: 232 AYVEWIEGCSAPRLTKFSFHDGMVEAYAHRNATIKIITVQNW-------SKDVINLNNKR 284
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+++ W + GS +T+ YPS +L+G+ S + I+ G DSG+KM+H+
Sbjct: 285 AIA-EEGARVDWVEGSIGSKMTFVYPSTILKGDNSSSRSAVVTIAKGPYLKDSGSKMIHV 343
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+NT S++++K ISA N YRG + + +GA ++ +C+SL++ + AHT P+ +
Sbjct: 344 GRNTRSQVINKTISADGGINVYRGIIRIVKGARNAVANVECESLILDDKSKAHTYPHNQV 403
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ ++ HEATT ++++ LFY RG+ EE A +LIV GF+ +VL++LP E+A K
Sbjct: 404 DEPTASVNHEATTGRLTEPQLFYLTSRGLTEEEAKSLIVLGFLEDVLKELPFEYANVLTK 463
Query: 479 LIDISL 484
++ +
Sbjct: 464 VVRLEF 469
>gi|161899171|ref|XP_001712812.1| SufB involved in iron sulfur protein biogenesis [Bigelowiella
natans]
gi|75756305|gb|ABA27200.1| SufB involved in iron sulfur protein biogenesis [Bigelowiella
natans]
Length = 489
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 223/474 (47%), Positives = 317/474 (66%), Gaps = 16/474 (3%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+ YKY ++ + + K LN + ++ IS K EP W++++RL A + P W+
Sbjct: 32 TESYKYKLKSFSECETIRKSLNSNTLKSISLKNLEPLWIIKFRLDALKSLYNRDTPKWSE 91
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
D ++ YY+A L++ L E I++ K A+
Sbjct: 92 FNSYNFDINNSIYYSA----------------LIKKDTALVSSNNETSIISSSSKKKTAI 135
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
D V DS+S+ T++++EL K GVIF +S ++ + DL+ ++ +VV + DN+Y +LNSAV
Sbjct: 136 DLVLDSISIDTSYQKELGKHGVIFTNLSNSLKNYSDLISNFMGSVVSLRDNYYTSLNSAV 195
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F++GSF+YIP + CP++LSTYFRIN GQFERTLI+ ++ + V+YLEGCTAP EN
Sbjct: 196 FSEGSFIYIPANLVCPLDLSTYFRINGNVIGQFERTLIVTEKNASVTYLEGCTAPYFTEN 255
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVEL A + +EIKYSTVQNWYPGDS GKGGI+NFVTKRG C G RSKISWTQ+ET
Sbjct: 256 QLHAAVVELCAEEGSEIKYSTVQNWYPGDSMGKGGIFNFVTKRGLCNGSRSKISWTQVET 315
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS++TWKYPS +L+G+ S GEFYSIA++ QQ D+G+KM+H+ + T S+I+SKGIS G
Sbjct: 316 GSSLTWKYPSVILKGDNSVGEFYSIALTKLRQQADTGSKMIHIGRKTFSKIISKGISLGN 375
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S N YRG V +H + S+N TQCDS++ G++ A+T PY+ ++SS LEHEA+ ++I
Sbjct: 376 SKNCYRGLVLIHNKSLKSKNTTQCDSIIFGDSSSANTYPYVTVRDSSAWLEHEASIARIQ 435
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
D+ +FY QRG+ E AI LIV GF +EV+++LP EF E +L++ S+ +G
Sbjct: 436 DDQVFYLQQRGLGFEEAINLIVGGFCKEVIEELPFEFLTEVNELLNSSMIKKIG 489
>gi|302349078|ref|YP_003816716.1| FeS assembly protein SufB [Acidilobus saccharovorans 345-15]
gi|302329490|gb|ADL19685.1| FeS assembly protein SufB [Acidilobus saccharovorans 345-15]
Length = 483
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 179/460 (38%), Positives = 267/460 (58%), Gaps = 21/460 (4%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG ++ D++ IS K EP+WM RL A + + P+W +ID D++ Y P
Sbjct: 41 KGKISRDLVEEISRSKGEPEWMRLLRLRAIEAFERLPMPNWL-EGVESIDLDEIAAYVKP 99
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
K+ +D+ + Y KLG+P E ++L+G + AVFDS +++T KEEL
Sbjct: 100 KA-ESSSEWEDLPDWMKDAYRKLGLPEAEAKVLSG-------LTAVFDSENMITRVKEEL 151
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
KK VIFM + EA+ ++PDLVK+Y V P D+ +AAL+ A+++ G+FVY+PKGV+
Sbjct: 152 KKKNVIFMSMDEAVKKYPDLVKEYFGRVFPYNDHKFAALHYALWSGGAFVYVPKGVKVLN 211
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ +F I + GQFE TL++ADEGS++ ++EGC AP + H +VE+ A +E+
Sbjct: 212 PVEAFFLIGSELEGQFEHTLLVADEGSFIHFIEGCAAPILPKFSFHDGMVEIYARKRSEV 271
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
++T+QNW G I NF KR + + W + GS IT+ YPS +L+G
Sbjct: 272 HFTTIQNW-------SGSIINFNNKRAIA-EDYANVEWVEGSIGSKITFTYPSTILKGRG 323
Query: 333 SCGEFYSIAISNGFQQI-DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ + SI I+NG +I D G+K +H+A T S I+SK IS+G YRG V V +GA
Sbjct: 324 ASTKNISIGIANGPSKIKDVGSKAIHVAPETRSLIISKSISSGGGIAAYRGLVKVLKGAR 383
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+S QCDSL++ A+T+P E + + HEAT ++ +E LFY RGI E
Sbjct: 384 NSVAHVQCDSLIMDRESRAYTLPRNEVDEPTAEVTHEATVGRLGEEQLFYLASRGITEGE 443
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
A A+IVNGF+R+VL+ LP+E K+I++ GSVG
Sbjct: 444 AKAMIVNGFIRDVLRGLPLETVSILTKVIELEFSQLGSVG 483
>gi|218883320|ref|YP_002427702.1| FeS assembly protein SufB [Desulfurococcus kamchatkensis 1221n]
gi|218764936|gb|ACL10335.1| FeS assembly protein SufB [Desulfurococcus kamchatkensis 1221n]
Length = 468
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 178/471 (37%), Positives = 269/471 (57%), Gaps = 25/471 (5%)
Query: 23 FETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI 81
+ I++ KG L+ I+ IS K EP+WM +RL A + P W +I
Sbjct: 19 YRKEIEI----KGRLSRSIVEEISRVKKEPEWMRLYRLKALEAFEKFPSPRWLPW-IESI 73
Query: 82 DFDDL-YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
D D++ YY P + + D++ E+ R YE+LG+P + LAG+ T+ D
Sbjct: 74 DLDEIASYYVKP-AASTVSNFDELPSEIRRIYERLGLPETYAKYLAGLLTAL-------D 125
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
S ++ T K+ LKK GVI +P+ EAI ++PD+VKKY V P D+ +AAL+ A+++ G
Sbjct: 126 SENIYTAMKDLLKKLGVIMLPMEEAIQKYPDIVKKYFGRVFPYTDHKFAALHHALWSGGV 185
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
FVY+P+GV+ P + +F I + GQFE T+++ DEGS ++++EGC+AP+ + H
Sbjct: 186 FVYVPRGVKVPYPVEAFFFIGSELEGQFEHTIVVGDEGSEITFIEGCSAPRLKRHSFHDG 245
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+VEL A + I + TVQNW I NF KRG + I W + GS IT
Sbjct: 246 MVELYAHKGSRINFVTVQNW-------SRNIVNFNNKRGIA-EDGAIIEWVEGSIGSKIT 297
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
YPS +L+G S I ISNG D+G+K++H A T+SRI+SK IS+ N Y
Sbjct: 298 VTYPSTILKGRGSKTTSTVIGISNGNVVKDAGSKIIHAAPYTSSRIISKSISSNGGINIY 357
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG V V++GA + +++TQCDSL++ + + T P + HEATT +I+++ LF
Sbjct: 358 RGLVQVNKGALNVKSYTQCDSLILDDKSSSSTYPIEHIMEKDAEVAHEATTFRITEDQLF 417
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
Y RG+ E+ A++LIV GFV+++ KLP E+A K+I + + G VG
Sbjct: 418 YMTSRGLSEKEAVSLIVLGFVKDIFPKLPFEYASMLTKVIQLEFKEIGGVG 468
>gi|309790998|ref|ZP_07685538.1| FeS assembly protein SufB [Oscillochloris trichoides DG6]
gi|308226971|gb|EFO80659.1| FeS assembly protein SufB [Oscillochloris trichoides DG6]
Length = 675
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 159/381 (41%), Positives = 223/381 (58%), Gaps = 8/381 (2%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ + G+ + + G V +S V + +EE +K GVIF+ A+ E
Sbjct: 303 IDSITPAGVEVVYDIEVDGPHNFVAEGLIVHNSEVVYHSLREEWQKMGVIFLDTDTALKE 362
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
HP++ K+Y TV+P DN YAALN+AV++ GSFVY+P GV+ + L YFRIN + GQF
Sbjct: 363 HPEIFKQYFGTVIPSADNKYAALNTAVWSGGSFVYVPAGVKVDIPLQAYFRINAESMGQF 422
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
ERTLII +EG+ Y+EGCTAP N LH+AVVE++ + +Y+T+QNW
Sbjct: 423 ERTLIIIEEGAEAHYIEGCTAPIYSTNSLHSAVVEIIIKKGGKFRYTTIQNWA------- 475
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
IYN VTKR + + W GS +T KYPS L G ++ GE S+A + Q
Sbjct: 476 NNIYNLVTKRAVAHEE-ASMEWVDGNIGSKLTMKYPSVYLMGRKARGEVLSVAYAGKGQH 534
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+G KM+H+A TTSRI +K +S TYRG V GA ++ CD+L++
Sbjct: 535 QDAGAKMVHVAPETTSRITNKSVSKDGGKTTYRGLAKVAPGAYGAKINVNCDALILDERS 594
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ TIPYIE + C L HEAT +I E LFY + RG+PE A+++IV GF+ ++L
Sbjct: 595 ASDTIPYIEIEEDRCTLAHEATVGRIGAEQLFYLMSRGLPEADALSMIVLGFMEPFTREL 654
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
PME+AVE +LI + +EGSVG
Sbjct: 655 PMEYAVELNRLIQMEMEGSVG 675
Score = 134 bits (336), Expect = 5e-29, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 10 KVRKIDVDQYKYGFETNIQV-DKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ + D KYGF KAPKGL+E ++R +S K EP+WML+ RL A +
Sbjct: 4 EPNNLQFDYSKYGFRQEENYLFKAPKGLSEKVVRELSGMKGEPEWMLQRRLKALAIFNQK 63
Query: 69 KDP---SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
P W +D+D ++Y+ D V E+ T+E+LGIP E++ L
Sbjct: 64 PTPLAGMWGNHELADLDYDSIHYFVRAGERPQSD-WDAVPAEIKNTFERLGIPEAERKFL 122
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
AGV + + E + G E
Sbjct: 123 AGVGAQYECLSGDARVYTTKGLVPIEEIQPGDTVFSFDE 161
>gi|331668367|ref|ZP_08369215.1| FeS assembly protein SufB [Escherichia coli TA271]
gi|331063561|gb|EGI35472.1| FeS assembly protein SufB [Escherichia coli TA271]
Length = 353
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 228/342 (66%), Positives = 281/342 (82%), Gaps = 1/342 (0%)
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
++L + G+IF EAI +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKG
Sbjct: 13 IAKKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKG 72
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
VRCPMELSTYFRIN + TGQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++
Sbjct: 73 VRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIH 132
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
NAE+KYSTVQNW+PGD+ GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+
Sbjct: 133 KNAEVKYSTVQNWFPGDNN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCI 191
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
LRG+ S GEFYS+A+++G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V +
Sbjct: 192 LRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIM 251
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
A ++RNFTQCDS+LIG NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI
Sbjct: 252 PTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGI 311
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 312 SEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 353
>gi|301500986|ref|YP_003795451.1| ABC transporter for iron-sulfur cluster formation; sufB [Alveolata
sp. CCMP3155]
gi|300069532|gb|ADJ66639.1| ABC transporter for iron-sulfur cluster formation; sufB [Chromerida
sp. RM11]
Length = 491
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 236/474 (49%), Positives = 316/474 (66%), Gaps = 13/474 (2%)
Query: 18 QYKYGFETN--IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
QY+YG N + +GL+ D+IR +S + EP + +R A+ W + P W+
Sbjct: 29 QYEYGTSLNGLSSHSRLHQGLSTDLIRRVSRLRREPIQIRLFRERAFTWWQKLNIPKWSL 88
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
PA + + +Y+ P +S +L T +L +P Q VAV
Sbjct: 89 FAPPAPECNLQIFYSVPSQDSLTRS------KLEDTVNQLNLPAATQ-----GDRKPVAV 137
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
D V SVSV+ T K +L KSG+IF +++AI ++P LV+KYL VVPV DNFYAALNSA+
Sbjct: 138 DTVVGSVSVLATLKLQLMKSGIIFCSLTQAIVQYPWLVQKYLGKVVPVADNFYAALNSAI 197
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSF +IPK +C +ELSTYFRI ++ +GQFERTL++A+ GSYVSYLEGCTA + D+N
Sbjct: 198 FSDGSFCFIPKDTKCDVELSTYFRIEDETSGQFERTLVVAETGSYVSYLEGCTAIKYDDN 257
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
Q HAAVVEL+A AEIKYSTVQNWY GD G+GG+YN VTKRG C G ++KISW Q+E
Sbjct: 258 QFHAAVVELLAEAGAEIKYSTVQNWYTGDENGEGGLYNLVTKRGMCVGSQAKISWAQVEM 317
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPSC+L GE S GEFYS++ +N QQ D+GTKM+H+ + SRI+SK IS G
Sbjct: 318 GSAITWKYPSCILMGENSQGEFYSVSFTNSLQQADTGTKMIHIGTGSKSRIISKSISTGL 377
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S N YRG V + A ++NFT+CDS+L+G + T PYI + + C++EHEAT I+
Sbjct: 378 SKNIYRGSVEIGPRAYQAQNFTKCDSILLGPDSLTCTFPYIIASTNKCHVEHEATVQPIN 437
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ LFY QRG+PEE I L+V+GF EV ++LP+EF VE L+ + +E S+G
Sbjct: 438 QDQLFYLRQRGLPEEYCIGLLVSGFCEEVCEQLPLEFGVETSFLLALKVEESLG 491
>gi|159041645|ref|YP_001540897.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
gi|157920480|gb|ABW01907.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
Length = 471
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 157/492 (31%), Positives = 242/492 (49%), Gaps = 24/492 (4%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRL 59
M V+ + K+ G I+ D G ++ D + +S + EPDWM RL
Sbjct: 1 MSDVKLNLIKIEDFSN---MLGSAKPIKWDVTITGRISRDTVEELSRIRGEPDWMRRLRL 57
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A + P+W + I+ + L YA P S+ +S D++ EL YE L IP
Sbjct: 58 RALEMFEKQPWPNWLPLE-GNINLESLILYAKP-SVERARSWDELPRELREYYEALQIPE 115
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E +LAG V + DS V ++ L+++GV+ M + EA+ +PDLVK+Y
Sbjct: 116 VESRLLAG-------VISQVDSGVVYENVRKSLEEAGVVAMSMDEAVKRYPDLVKQYFMK 168
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+ P + +A+LN A+++ G FVY+P M + I+ GQFE +LII E S
Sbjct: 169 IFPP-EYKFASLNIALWSGGVFVYVPPNTHVKMPMELVVLISSANVGQFEHSLIIVGENS 227
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
V + C AP LH V E+ A +K ++NW G+ F R
Sbjct: 228 QVELIVACAAPVFSGLSLHDGVTEVYVHKGARVKLVDMKNW-------SKGVIYFGNNRA 280
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + W G +T YP +L+GE + S+A++NG + G K+ H A
Sbjct: 281 IAEA-NTNVEWLSGSLGGKVTMVYPMTVLKGEYAKTTVTSVALANGLTWKEEGAKVFHDA 339
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T+S++V+KG+S YRG V V RGA +R+ CDSL++ + A+TIP+ +
Sbjct: 340 PHTSSKVVNKGVSVNGGTTVYRGLVYVRRGARFARSHVSCDSLILDDKSKAYTIPHDQVF 399
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ + HEA T +IS++ LFY RG+ EE A +LIV G+ +V+ LPME+ K
Sbjct: 400 EDTAVVTHEAYTGRISEDKLFYLRSRGLNEEEAKSLIVLGYFHDVMVNLPMEYMSIFNKA 459
Query: 480 IDISLE--GSVG 489
I++ L VG
Sbjct: 460 IELELSKMHKVG 471
>gi|297794973|ref|XP_002865371.1| hypothetical protein ARALYDRAFT_494555 [Arabidopsis lyrata subsp.
lyrata]
gi|297311206|gb|EFH41630.1| hypothetical protein ARALYDRAFT_494555 [Arabidopsis lyrata subsp.
lyrata]
Length = 460
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 222/489 (45%), Positives = 291/489 (59%), Gaps = 88/489 (17%)
Query: 5 RETVDKVRK-IDVDQY--KYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
E+ DK+++ Y KYGF +I P GL+E+ IR IS K EP W+LE+RL A
Sbjct: 56 TESSDKLQQYFKNQDYVKKYGFTEHIDSLTIPNGLSEETIRLISKLKKEPTWILEFRLKA 115
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
Y ++L +++P W+ RYP ++ D+ YY+ PK + P++L +++L +PI +
Sbjct: 116 YAKFLKLEEPKWSDNRYPLLNLQDMCYYSVPKKKPTLDN-----PKVLEIFDRLDVPITK 170
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ + KVAVDAVF+S S+ T KE L+KSGVIF ISEAI ++P L+KK+L VV
Sbjct: 171 KK-----CSPKVAVDAVFNSESIAITNKEPLEKSGVIFCSISEAIRKYPALIKKFLGRVV 225
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KGTGQFERTLIIADEGSY 240
P DN+YAALNSAVF+DGSF Y+PK RC M +S+YFR+N K TGQFERTLI+A+EGSY
Sbjct: 226 PSDDNYYAALNSAVFSDGSFCYVPKNTRCLMPVSSYFRMNAIKSTGQFERTLIVAEEGSY 285
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V Y EGCTA D+NQLHAAVVEL + AEIKYST G
Sbjct: 286 VEYSEGCTAISHDKNQLHAAVVELYCAEGAEIKYSTG---------------------GL 324
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C G RSKISWTQ+E GSAITWKYPS +L G+ S GE
Sbjct: 325 CAGDRSKISWTQVEKGSAITWKYPSVVLEGDDSVGE------------------------ 360
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
A +++N + CDS+LIG+N A+T PYI+ KN
Sbjct: 361 -----------------------------AENAKNTSTCDSMLIGDNAAANTYPYIQVKN 391
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +EHEA+TSKI D+ +FY QRGI E A+A +++GF R+V KLP EF E +L+
Sbjct: 392 PSARVEHEASTSKIGDDQIFYFQQRGIDHERALAAMISGFCRDVFTKLPNEFGAEVNQLL 451
Query: 481 DISLEGSVG 489
I LEGSVG
Sbjct: 452 SIKLEGSVG 460
>gi|159042395|ref|YP_001541647.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
gi|157921230|gb|ABW02657.1| FeS assembly protein SufB [Caldivirga maquilingensis IC-167]
Length = 474
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 170/469 (36%), Positives = 261/469 (55%), Gaps = 21/469 (4%)
Query: 24 ETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR-IRYPAI 81
+T I+ KG + D+I IS KNEPDWM RL + + P+W I
Sbjct: 22 DTPIRRSIEIKGKITSDVIEEISKAKNEPDWMRRLRLRNLELFNKLPAPNWLPNWVLENI 81
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
+ ++ YA P I S D++ PE+ + YE L IP E L G + A DS
Sbjct: 82 NLEEYSTYAKPD-INRASSWDEIPPEVRKYYESLNIPEIEARALMG-------LGAQLDS 133
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
+ +++L + GV+ MP+ EA+ ++PDLVK+Y + P ++ +AAL+ A+++ G F
Sbjct: 134 EMIYFNIRKQLAEKGVVVMPMEEAVQKYPDLVKQYFMKIFPP-EHKFAALHGALWSGGVF 192
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
VY+P GVR + +F I+ G GQFE TL+IAD+ SY+ ++EGC+AP+ H +
Sbjct: 193 VYVPPGVRIEAPIEAFFLISNAGEGQFEHTLLIADKDSYIHFIEGCSAPRFSRYSFHDGM 252
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
VEL A + A I+++TVQNW + NF KR +K+ W + GS ++
Sbjct: 253 VELYAHEGARIRFTTVQNW-------SRNVINFNNKRAIA-ERNAKVEWVEASIGSMASF 304
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YPS +L+GE + E I ++NG ++G K++H A NT S+IV+K ISA Y+
Sbjct: 305 VYPSTILKGEGAGTEITGITVANGKHIKENGAKVIHDAPNTYSKIVNKSISANGGTVVYK 364
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G V V RGA +R+ CDSL++ + A+TIP+ + + + HEA T +IS++ LFY
Sbjct: 365 GVVYVRRGARFARSHVSCDSLILDDKSKAYTIPHDQVFEDTAVVTHEAYTGRISEDKLFY 424
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSV 488
RG+ EE A +LIV GF+ +V + LP E+A+ ++I + G V
Sbjct: 425 LRSRGLNEEEAKSLIVLGFISDVTEGLPFEYAMVLNRVISLEFSKYGKV 473
>gi|121598871|ref|YP_993705.1| FeS assembly protein SufB [Burkholderia mallei SAVP1]
gi|124384731|ref|YP_001028836.1| FeS assembly protein SufB [Burkholderia mallei NCTC 10229]
gi|167001119|ref|ZP_02266920.1| FeS assembly protein SufB [Burkholderia mallei PRL-20]
gi|121227681|gb|ABM50199.1| FeS assembly protein SufB [Burkholderia mallei SAVP1]
gi|243063067|gb|EES45253.1| FeS assembly protein SufB [Burkholderia mallei PRL-20]
Length = 397
Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats.
Identities = 247/387 (63%), Positives = 303/387 (78%), Gaps = 9/387 (2%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFD VSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDLVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GVRCPMELS+YFRIN + TGQFERTLIIA+ GS+V YLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVRCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSV--HRGAAHS-RNFTQC 399
+ N+YRG V V A + R+ +C
Sbjct: 371 AQNSYRGLVRVARTPKARATIRSAIRC 397
>gi|238562372|ref|ZP_00440577.2| FeS assembly protein SufB [Burkholderia mallei GB8 horse 4]
gi|238522798|gb|EEP86240.1| FeS assembly protein SufB [Burkholderia mallei GB8 horse 4]
Length = 397
Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats.
Identities = 246/387 (63%), Positives = 302/387 (78%), Gaps = 9/387 (2%)
Query: 17 DQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARI 76
Y++GF T+I+ D P GL+E ++R IS +K EP ++L+WRL A+ RWL M P W ++
Sbjct: 16 QTYRHGFVTDIESDSLPPGLDEGVVREISRRKREPAFLLKWRLAAFERWLAMSPPDWGKL 75
Query: 77 RYPAIDFDDLYYYAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
R IDF YY+APKS P+SLD+VDP+LL TYEKL +P+ E+ LAG VAV
Sbjct: 76 RIAPIDFQAQSYYSAPKSLKDQPKSLDEVDPKLLETYEKLNVPLHERARLAG-----VAV 130
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
DAVFD VSV TTF+E+L ++GVIF S A+ HP+L+++YL TVVP DNFYAALNSAV
Sbjct: 131 DAVFDLVSVGTTFREQLAEAGVIFCSFSHAVEHHPELIERYLGTVVPPADNFYAALNSAV 190
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F+DGSFVY+P+GV CPMELS+YFRIN + TGQFERTLIIA+ GS+V YLEGCTAPQRDE+
Sbjct: 191 FSDGSFVYVPQGVHCPMELSSYFRINAQNTGQFERTLIIAEPGSHVGYLEGCTAPQRDEH 250
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELVA D+A IKYSTVQNWYPGD+ G GGIYNFVTKRG C G RS+I+WTQ+ET
Sbjct: 251 QLHAAVVELVAHDDAHIKYSTVQNWYPGDADGVGGIYNFVTKRGLCAGARSRIAWTQIET 310
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPS +LRG++S GEF+SIA+SN QQ D+GTKM+HL +NT SRIVSKGISAG
Sbjct: 311 GSAITWKYPSVVLRGDESSGEFHSIAVSNHCQQADTGTKMIHLGRNTRSRIVSKGISAGR 370
Query: 376 SNNTYRGKVSV--HRGAAHS-RNFTQC 399
+ N+YRG V V A + R+ +C
Sbjct: 371 AQNSYRGLVRVARTPKARATIRSAIRC 397
>gi|119720112|ref|YP_920607.1| FeS assembly protein SufB [Thermofilum pendens Hrk 5]
gi|119525232|gb|ABL78604.1| FeS assembly protein SufB [Thermofilum pendens Hrk 5]
Length = 470
Score = 363 bits (931), Expect = 5e-98, Method: Composition-based stats.
Identities = 158/453 (34%), Positives = 250/453 (55%), Gaps = 18/453 (3%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG ++ ++ IS K EP+WML RL + + + +P+W + +D ++L +Y P
Sbjct: 29 KGRISRSLVEEISRSKGEPEWMLRLRLRSLELFEKLPEPNWL-VGVDELDLEELAHYVHP 87
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
+ +D+ ++ + YE+LG+P E+ +L+G+ A +S +V FK+ L
Sbjct: 88 D-VERVSRWEDLPEDVRKVYERLGLPEIERRVLSGLA-------AQLESENVYLAFKKFL 139
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
+K GVI M +SEA+ +PDLVKKY V P D+ +AAL+ A+++ G F+Y+P VR
Sbjct: 140 EKQGVILMDMSEAVQRYPDLVKKYFMRVFPPSDHKFAALHGALWSGGVFLYVPPNVRIEA 199
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ +F I + Q E T+++ADEGS+V ++EGC AP + H +VE+ A + +
Sbjct: 200 PIEAFFFIASELESQMEHTIVVADEGSFVHFIEGCAAPMFKKYSFHNGMVEVYAHKGSHV 259
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
K++T QNW + NF KR + + W + GS +++ YPS +LRG
Sbjct: 260 KFTTAQNW-------SKNLVNFNNKRALV-EEGAVVEWVEGSIGSKVSYVYPSAILRGAN 311
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +I ++ G D G K+ HLA +T+S +VSK ISA YRG V V RGA
Sbjct: 312 ARVSITNITLAKGPVWKDGGAKVYHLAPSTSSEVVSKSISADGGTAVYRGLVKVARGARG 371
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S +CDSL++ A T P E + HEATT ++S+E LFY RG+ E A
Sbjct: 372 STAAVKCDSLILDKKSKALTYPRNEVDEEDSTVVHEATTGRLSEEALFYLKTRGLSESEA 431
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
L+V G+V +VL KLP E+ V ++++++ E
Sbjct: 432 RRLVVLGYVGDVLGKLPFEYQVVFRRVLELEFE 464
>gi|325968927|ref|YP_004245119.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
gi|323708130|gb|ADY01617.1| FeS assembly protein SufB [Vulcanisaeta moutnovskia 768-28]
Length = 473
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 148/456 (32%), Positives = 233/456 (51%), Gaps = 20/456 (4%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
+ D++ IS + EPDWM RL A + P+W + ID + L YA P S+
Sbjct: 36 ITRDVVEEISRVRGEPDWMRRLRLRALEMFEKQPWPNWLPLE-GNIDLESLVLYAKP-SV 93
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+S D++ EL YE L IP E ++LAG V D + K++L+K+
Sbjct: 94 ERARSWDELPRELREYYETLRIPELEAKVLAG-------VIGQVDGGITYESIKKDLEKA 146
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GVI M + EA+ +PDLVK+Y + V P + +A+LN A++ G FVY+P GV M +
Sbjct: 147 GVIAMSMDEAVKRYPDLVKQYFARVFPP-EYKFASLNIALWGGGVFVYVPPGVHVKMPIE 205
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
I+ G GQFE +L+I EG+ ++ C AP LH + E A ++
Sbjct: 206 LVILISSAGVGQFEHSLVIVGEGASAEFIVACAAPVFTGLSLHDGMTEAYIHRGARVRLI 265
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++NW + F R + + W G +T YP +L+G +
Sbjct: 266 DLKNW-------SKDVIYFGNNRAII-EDNASVDWLSGSLGGKVTIVYPMSVLKGVNART 317
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
S+A++NG + G K+ H A +T S++VSKG+S + YRG V V GA ++++
Sbjct: 318 TITSVALANGPTWKEEGAKVFHSAPHTYSKVVSKGVSLNGGTSVYRGLVYVRDGARYAKS 377
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
C+SL++ +N A+TIP+ + + + HEA T +I ++ LFY RG+ EE A +L
Sbjct: 378 SVSCESLILDDNSKAYTIPHEQVFEETATVTHEAYTGRIGEDKLFYLRSRGLSEEEARSL 437
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
IV G+ +V+ LP+E+ + I++ L G VG
Sbjct: 438 IVLGYFHDVMINLPVEYMSIFNRAIELELSRMGGVG 473
>gi|307594382|ref|YP_003900699.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
gi|307549583|gb|ADN49648.1| FeS assembly protein SufB [Vulcanisaeta distributa DSM 14429]
Length = 473
Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats.
Identities = 150/456 (32%), Positives = 231/456 (50%), Gaps = 20/456 (4%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
+ D+I IS + EPDWM RL A + P+W + +D + L YA P S+
Sbjct: 36 ITRDVIEEISRVRGEPDWMRRLRLRALEMFERQPWPNWLPLE-GNVDLESLVLYAKP-SV 93
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+S D++ EL YE L IP E +L+G V D V + K++L+K+
Sbjct: 94 ERARSWDELPRELREYYEALRIPELEARVLSG-------VIGQVDGGIVYESVKKDLEKA 146
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GVI M + EA+ +PDLVK+Y + V P + +A+LN A++ G FVY+P GV M +
Sbjct: 147 GVIAMSMDEAVKRYPDLVKQYFARVFPP-EYKFASLNIALWGGGVFVYVPPGVHVKMPIE 205
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
I+ G GQFE +LII E + ++ C AP LH + E A +K
Sbjct: 206 LVILISSAGVGQFEHSLIIVGENANAEFIVACAAPVFTGLSLHDGMTEAYIHRGARVKLV 265
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++NW + F R S + W G +T YP +L+G S
Sbjct: 266 DLKNW-------SKDVIYFGNNRAILEENVS-VDWLSGSLGGKVTIVYPMSVLKGVNSRT 317
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
S+A++NG + G K+ H A +T S++VSKG+S + YRG V V GA ++R+
Sbjct: 318 TVTSVALANGPTWKEEGAKVFHSAPHTYSKVVSKGVSLNGGTSVYRGLVYVREGAKYARS 377
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
C+SL++ + A+TIP+ + + + HEA T +I ++ LFY RG+ EE A +L
Sbjct: 378 SVNCESLILDDKSKAYTIPHEQVFEETAIVTHEAYTGRIGEDKLFYLRSRGLSEEEARSL 437
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
+V G+ +++ LP+E+ K I++ L G VG
Sbjct: 438 VVLGYFHDIMVNLPVEYVSIFNKAIELELSRMGGVG 473
>gi|124027409|ref|YP_001012729.1| hypothetical protein Hbut_0522 [Hyperthermus butylicus DSM 5456]
gi|123978103|gb|ABM80384.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
Length = 476
Score = 352 bits (902), Expect = 9e-95, Method: Composition-based stats.
Identities = 166/471 (35%), Positives = 258/471 (54%), Gaps = 20/471 (4%)
Query: 22 GFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPA 80
GF+ + +G + ++ IS K EPDWM RL A + + P W +
Sbjct: 23 GFQKPYPKEIEIRGRIERSLVEEISRVKKEPDWMRRLRLRALELFYKLPMPRW-VVGIEE 81
Query: 81 IDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
ID +++ Y PK+ +S +D+ + Y KLG+ + +L+G + AVFD
Sbjct: 82 IDLEEIAAYVKPKA-EKAESWEDLPGWIKEYYTKLGLQEAVKRMLSG-------LTAVFD 133
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
S +V+ K+EL++ GVI +P+ EA+ +PDLVK+Y V P D+ +AAL+ A+++ G+
Sbjct: 134 SETVLNLTKKELQEKGVILLPMEEAVQRYPDLVKQYFGRVFPASDHKFAALHHALWSGGA 193
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
FVY+P G+R + +F I + GQFE TL+IA E SY+ ++EGC AP + H
Sbjct: 194 FVYVPPGIRLTQPIEAFFFIGSELEGQFEHTLLIAGENSYIEFIEGCAAPMLKKFSFHDG 253
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+VE+ A A + + TVQNW + NF KR + + W + GS IT
Sbjct: 254 MVEIYAHRGARVHFYTVQNW-------SRNVINFNNKRAIA-EEGAHVEWLEGSIGSKIT 305
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ YP+ +LRG + S+AI+NG D+G K++H A +T S I+SK IS+ + Y
Sbjct: 306 YTYPTTILRGRGASTRNVSVAIANGPYIKDTGGKVIHAAPDTRSIIISKSISSNGGLSIY 365
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG V V+RGA S + QCDSL++ A+T P E + + HEA+ ++ ++ LF
Sbjct: 366 RGLVRVNRGAYRSVSHVQCDSLILDERSKAYTYPRNEVNEPTAEVTHEASVGRLGEDQLF 425
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
Y RG+ E A A+IV GF++ VL+ LPME K+I++ G++G
Sbjct: 426 YMASRGLSEGEAKAMIVLGFIQSVLRTLPMELFGILSKVIELEFSEYGALG 476
>gi|327310465|ref|YP_004337362.1| ABC transporter subunit [Thermoproteus uzoniensis 768-20]
gi|326946944|gb|AEA12050.1| ABC transporter subunit, putative [Thermoproteus uzoniensis 768-20]
Length = 475
Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats.
Identities = 168/459 (36%), Positives = 261/459 (56%), Gaps = 21/459 (4%)
Query: 34 KG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
KG + D++ IS K EPDWM RL + + P W R +D + L +YA P
Sbjct: 35 KGRITRDMVEEISRLKGEPDWMRRLRLRMLELFEKLPTPRWVR-GIGEVDLEALAHYAKP 93
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
++ +S D++ E+ YEKLG+P E + L G+ T FDS V FK++L
Sbjct: 94 QTETA-KSWDELPKEIREYYEKLGLPEMEAKALLGLAT-------QFDSEIVYFNFKKKL 145
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
++ GVI +P+ EA+ ++PDLVK+Y V P ++ +AAL+ A+++ G+F+Y+P GVR
Sbjct: 146 QEKGVIMLPMEEAVKKYPDLVKQYFMRVFPA-EHKFAALHGALWSGGTFIYVPPGVRIEQ 204
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
L T+F I Q E ++++AD G+YV ++E C+AP+ + H +VE A + A++
Sbjct: 205 PLETFFLIGGSQESQMEHSIVVADRGAYVHWIEACSAPRLLKYSFHNGMVEGYAHEGADL 264
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
K +TVQNW I NF KR + + W + GS T+ +PS +L+GE
Sbjct: 265 KITTVQNW-------SRDIVNFNNKRAVAEAK-AHVQWVEGSIGSKTTYTFPSTILKGEG 316
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E Y I +NG ++G K+ HLA +T SR+V+K ISA + YRG V V +GA +
Sbjct: 317 ASTEIYGITAANGGLWKENGAKVWHLAPDTKSRVVNKSISARGGTSVYRGMVYVAKGAKY 376
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+R+ QCD+L++ TIP+ + + + HEAT S+IS+E L Y RG E+ A
Sbjct: 377 ARSHVQCDALVLDGGSANITIPHDQVFEDTAVVTHEATASRISEEKLMYLRSRGFTEDEA 436
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
A IV GFV ++++ LP E+AV Q+++++ G VG
Sbjct: 437 KASIVLGFVSDIVKDLPFEYAVVLQRVLELEFSKLGRVG 475
>gi|119873232|ref|YP_931239.1| FeS assembly protein SufB [Pyrobaculum islandicum DSM 4184]
gi|119674640|gb|ABL88896.1| FeS assembly protein SufB [Pyrobaculum islandicum DSM 4184]
Length = 474
Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats.
Identities = 167/485 (34%), Positives = 257/485 (52%), Gaps = 19/485 (3%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRL 59
M + ++ + G E KG + D+I IS K EPDWM RL
Sbjct: 1 MQEFESLRSTISHVEFVEEMLGVERRFNYQVELKGRITRDMIEEISRLKGEPDWMRRLRL 60
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ + P W R ID + L +YA P + S D V E+ YEKLGIP
Sbjct: 61 RMLELFEKLPMPRWVRA-VEEIDLETLVHYAKP-QVETVSSWDQVPKEIREYYEKLGIPE 118
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
E + L G + A FDS + K++L++ GV+ +P+ EA+ +P+LV++Y
Sbjct: 119 IEAKALLG-------LGAQFDSEIIYFNLKKKLQELGVVMLPMEEAVKRYPELVQRYFMR 171
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V P ++ +AAL+ A+++ G F+Y+P GVR L T+F I + Q E ++++AD+G+
Sbjct: 172 VFPP-EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGA 230
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
YV ++EGC+AP+ + H +VE A + A +K +TVQNW + NF KR
Sbjct: 231 YVHWIEGCSAPRLLKYSFHNGMVEGYAHEGATLKITTVQNW-------SRNVVNFNNKRA 283
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+K+ W + GS T+ +PS +L+GE + E I + G ++G K+ HLA
Sbjct: 284 VAEA-GAKVHWVEGSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLA 342
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T+SR+V+K ISA YRG V V RGA ++R+ QCDSL++ T+P+ +
Sbjct: 343 PRTSSRVVNKSISAEGGVAVYRGVVHVQRGAKYARSHVQCDSLVLDKKSATLTVPHDQVF 402
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+ + HEAT S IS+E + Y RG E+ A A IV GFV ++L+ LP E+AV ++
Sbjct: 403 EETAVVTHEATASTISEEKIMYLRARGFTEDDAKASIVLGFVGDILKDLPFEYAVVLSRV 462
Query: 480 IDISL 484
I++
Sbjct: 463 IELEF 467
>gi|218509417|ref|ZP_03507295.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
Brasil 5]
Length = 294
Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 252/294 (85%), Positives = 277/294 (94%)
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
FTDGSFV++PKGVRCPMELSTYFRINEKGTGQFERTLIIA+EG+YVSYLEGCTAPQRDEN
Sbjct: 1 FTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEGCTAPQRDEN 60
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVELV LD+AEIKYSTVQNWYPGD +GKGGIYNFVTKRGDCRG RSKISWTQ+ET
Sbjct: 61 QLHAAVVELVVLDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKISWTQVET 120
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL KNT+SRIVSKGI+AG
Sbjct: 121 GSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGV 180
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
SNNTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KNS+ EHEATTSKIS
Sbjct: 181 SNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKIS 240
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYCLQRGIP EAAIALIVNGFV+EVLQ+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 241 EDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLISISLEGSVG 294
>gi|255017309|ref|ZP_05289435.1| hypothetical protein LmonF_05173 [Listeria monocytogenes FSL
F2-515]
Length = 365
Score = 343 bits (879), Expect = 5e-92, Method: Composition-based stats.
Identities = 159/377 (42%), Positives = 224/377 (59%), Gaps = 18/377 (4%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF + V + +GL E ++R IS K EP+WMLE+RL + ++ M P+W
Sbjct: 6 EIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKMPMPTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ F+D+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 66 GG-DLSELKFEDITYYVKP-SEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K++L+ G++F A+ E+ D+ K+Y + V+P DN +AALNS
Sbjct: 120 ---AQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AV++ GSF+Y+P G++ L YFRIN + GQFERTLII DE + V+Y+EGCTAP
Sbjct: 177 AVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIVDENASVNYVEGCTAPVYT 236
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N LH+AVVE++ A +Y+T+QNW +YN VTKR C + + W
Sbjct: 237 TNSLHSAVVEIIVKPGAYCRYTTIQNWA-------NNVYNLVTKRTFC-EENATMEWIDG 288
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
GS +T KYP+ LRGE + G SIAI+ Q+ D+G KM+H A NT+S IVSK IS
Sbjct: 289 NIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSKSISK 348
Query: 374 GFSNNTYRGKVSVHRGA 390
N TYRG V R A
Sbjct: 349 QGGNVTYRGIVHFGRNA 365
>gi|126459228|ref|YP_001055506.1| FeS assembly protein SufB [Pyrobaculum calidifontis JCM 11548]
gi|126248949|gb|ABO08040.1| FeS assembly protein SufB [Pyrobaculum calidifontis JCM 11548]
Length = 473
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 167/464 (35%), Positives = 258/464 (55%), Gaps = 19/464 (4%)
Query: 22 GFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPA 80
G E + KG + D++ IS K EPDWM RL + + P W R
Sbjct: 21 GVEKKLAYQVVLKGKITRDMVEEISRLKGEPDWMRRLRLRMLELFEKLPMPKWVRA-VEE 79
Query: 81 IDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
ID + L +YA P++ S D V E+ YEKLG+P E + L G + A FD
Sbjct: 80 IDLEALAHYAKPQT-ETVTSWDQVPKEIREYYEKLGLPEIEAKALLG-------LGAQFD 131
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
S + K++L++ GV+ +P+ EA+ ++PDLV+KY V P ++ +AAL+ A+++ G
Sbjct: 132 SEIIYFNLKKKLQEKGVVMLPMEEAVKKYPDLVQKYFMRVFPP-EHKFAALHGALWSGGV 190
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
F+Y+P GVR L T+F I + Q E ++++AD+G+YV ++EGC+AP+ + H
Sbjct: 191 FIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGAYVHWIEGCSAPRLMKYSFHDG 250
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+VE A + A +K +TVQNW + NF KR +K+ W + GS T
Sbjct: 251 MVEGYAHEGATLKITTVQNW-------SRDVVNFNNKRAIAEA-HAKVHWVEGSIGSKTT 302
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ +PS +L+GE + E I + G ++G K+ HLA T+SR+V+K ISA Y
Sbjct: 303 YTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLAPKTSSRVVNKSISAEGGVAVY 362
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG + V RGA ++++ QCDSL++ + TIP+ + + + HEAT S IS+E +
Sbjct: 363 RGLIHVQRGAKYAKSHVQCDSLVLDKDSATLTIPHDQVFEETAVVTHEATASTISEEKIA 422
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
Y RG+ E+AA A IV GFV +VL+ LP E+AV ++I++
Sbjct: 423 YLRARGLTEDAAKAAIVLGFVGDVLKDLPFEYAVVLSRVIELEF 466
>gi|171185227|ref|YP_001794146.1| FeS assembly protein SufB [Thermoproteus neutrophilus V24Sta]
gi|170934439|gb|ACB39700.1| FeS assembly protein SufB [Thermoproteus neutrophilus V24Sta]
Length = 474
Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats.
Identities = 166/480 (34%), Positives = 263/480 (54%), Gaps = 28/480 (5%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E+V+++ ++ F +++ KG + D+I IS K EPDWM RL
Sbjct: 15 ESVEELLGVERQ-----FNYQVEL----KGRITRDMIEEISRLKGEPDWMRRLRLRMLEL 65
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ + P W R ID + L +YA P++ S D V E+ YEKLG+P E +
Sbjct: 66 FEKLPTPRWVRA-VEEIDLEALVHYAKPQT-EAVSSWDQVPKEIREYYEKLGLPEIEAKA 123
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
L G + A FDS + K++L++ GV+ +P+ EA+ +P+LV++Y V P
Sbjct: 124 LLG-------LGAQFDSEIIYFNLKKKLQELGVVMLPMEEAVKRYPELVQRYFMRVFPP- 175
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
++ +AAL+ A+++ G F+Y+P GVR L T+F I + Q E ++++AD+G+YV ++
Sbjct: 176 EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGAYVHWI 235
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + H +VE A + A +K +TVQNW + NF KR
Sbjct: 236 EGCSAPRLLKYSFHNGMVEGYAHEGATLKITTVQNW-------SRNVVNFNNKRAVAEA- 287
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+K+ W + GS T+ +PS +L+GE + E I + G ++G K+ HLA T+S
Sbjct: 288 GAKVHWVEGSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLAPRTSS 347
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R+V+K ISA YRG V V RGA ++R+ QCDSL++ T+P+ + +
Sbjct: 348 RVVNKSISAEGGVAVYRGVVHVQRGAKYARSHVQCDSLVLDKKSATLTVPHDQVFEETAV 407
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT S IS+E + Y RG E+ A A IV GFV ++L+ LP E+AV ++I++
Sbjct: 408 VTHEATASTISEEKIMYLRARGFTEDDAKASIVLGFVGDILKDLPFEYAVVLSRVIELEF 467
>gi|18312899|ref|NP_559566.1| ABC transporter subunit, putative [Pyrobaculum aerophilum str. IM2]
gi|18160391|gb|AAL63748.1| ABC transporter subunit, putative [Pyrobaculum aerophilum str. IM2]
Length = 474
Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats.
Identities = 167/480 (34%), Positives = 265/480 (55%), Gaps = 28/480 (5%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYRR 64
E+V++V I+ F +++ KG + +D++ IS K EPDWM RL
Sbjct: 15 ESVEEVLGIEKK-----FSYQVEL----KGRITKDMVEEISRLKGEPDWMRRLRLRMLEL 65
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ + P W R ID + L +YA P++ S D + E+ YEKLG+P E +
Sbjct: 66 FEKLPTPKWVRA-VQEIDLEALVHYAKPQT-ETVSSWDQLPKEIREYYEKLGLPEIEAKA 123
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
L G + A FDS + K++L++ GVI +P+ EA+ ++PDLV++Y V P
Sbjct: 124 LLG-------LGAQFDSEIIYFNLKKKLQEKGVIMLPMEEAVRKYPDLVQRYFMRVFPP- 175
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
++ +AAL+ A+++ G F+Y+P GVR L T+F I + Q E ++++AD+ +YV ++
Sbjct: 176 EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKDAYVHWI 235
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGC+AP+ + H +VE A + A +K +TVQNW + NF KR
Sbjct: 236 EGCSAPRLLKYSFHNGMVEGYAHEGATLKITTVQNW-------SRNVVNFNNKRAIAEAR 288
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+K+ W + GS T+ +PS +L+GE + E I + G ++G K+ HLA T+S
Sbjct: 289 -AKVHWVEGSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGTYWKENGAKVWHLAPRTSS 347
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R+V+K ISA YRG V V RGA ++++ QCDSL++ + T+P+ + +
Sbjct: 348 RVVNKSISAEGGVAVYRGIVHVQRGAKYAKSHVQCDSLVLDKDSATLTVPHDQVFEETAV 407
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT S IS+E L Y RG E+ A A IV GFV ++L+ LP E+AV ++I++
Sbjct: 408 VTHEATASTISEEKLAYLRARGFTEDDAKAAIVLGFVGDILKDLPFEYAVVLGRVIELEF 467
>gi|321312815|ref|YP_004205102.1| FeS assembly protein SufD [Bacillus subtilis BSn5]
gi|320019089|gb|ADV94075.1| FeS assembly protein SufD [Bacillus subtilis BSn5]
Length = 437
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 109/453 (24%), Positives = 198/453 (43%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ ++ S K EP W+ RL A + + P + + +F + +
Sbjct: 10 DQEYLKSFSEKHQEPAWLKNLRLQALEQAEDLPMPKPDKTKITNWNFTNFTKH------- 62
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
VD E L + E L E + L V+ + D + +ELK G
Sbjct: 63 ------TVDNEPLSSLEDL---TDEVKALIDVENEDKTLYVQRDQTPAYLSLSQELKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ AL++A+ G+F+Y+PK V+ +
Sbjct: 114 VIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F LI+A++ S V+Y+E + ++ + + E++ DNA + Y
Sbjct: 174 AVYVHESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V +RG RG SKI W T + L G+ + G
Sbjct: 234 AVDNL-------SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K + I+ G+ +++ + G + GA+ +
Sbjct: 287 DTKTVVVGRGEQTENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+ +LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVNELPIEGVK--KQLVSV-IERKV 436
>gi|291485740|dbj|BAI86815.1| hypothetical protein BSNT_04844 [Bacillus subtilis subsp. natto
BEST195]
Length = 437
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 109/453 (24%), Positives = 198/453 (43%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ ++ S K EP W+ RL A + + P + + +F + +
Sbjct: 10 DQEYLKSFSEKHQEPAWLKNLRLQALEQAEDLPMPKPDKTKITNWNFTNFAKH------- 62
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
VD E L + E L E + L V+ + D + +ELK G
Sbjct: 63 ------TVDNEPLSSLEDL---TDEVKALIDVENEDKTLYVQRDQTPAYLSLSQELKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ AL++A+ G+F+Y+PK V+ +
Sbjct: 114 VIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F LI+A++ S V+Y+E + ++ + + E++ DNA + Y
Sbjct: 174 AVYVHESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V +RG RG SKI W T + L G+ + G
Sbjct: 234 AVDNL-------SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K + I+ G+ +++ + G + GA+ +
Sbjct: 287 DTKTVVVGRGEQTENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+ +LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVNELPIEGVK--KQLVSV-IERKV 436
>gi|269837553|ref|YP_003319781.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
gi|269786816|gb|ACZ38959.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
Length = 443
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 121/462 (26%), Positives = 222/462 (48%), Gaps = 34/462 (7%)
Query: 34 KGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYY 88
+G + +S+ + EPDW+ E RL A+ + + P+ W + D+
Sbjct: 9 RGFTRRAVEELSSLRGEPDWVREKRLAAWEAYEAIPMPTRTDEEWRCTDIRRLPIGDVAP 68
Query: 89 YAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTF 148
YA P V + + E + G + + + DS SV +
Sbjct: 69 YATPNGRV----------------DSVAALQPEVAAVLGDEERRAGLTVQVDSSSVFSEL 112
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKG 207
+L + GVIF ++ AI ++PDLVK++ T VPV DN +AAL+ A ++ G+FVY+P G
Sbjct: 113 SADLAEQGVIFCDLATAIEKYPDLVKQHFMTEAVPVDDNKFAALHGAFWSGGTFVYVPAG 172
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
V+ + L + G G F TL++A++G+ V ++ + DE + A VVE++A
Sbjct: 173 VQVEVPLWAQVYAH-AGVGVFPHTLVVAEQGASVVVIDAWNSETSDEPTIAAGVVEIIAR 231
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
+ A+++Y +Q+W ++NFVT+R + ++ + GS ++ + +
Sbjct: 232 EEAQVRYIQLQDWG-------RNVWNFVTQRSLI-AQDAVVNSLNVGLGSKLSKSFIAGH 283
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L G + E + ++ Q +D T+ H++ S ++ KG + Y G + V
Sbjct: 284 LVGAGALAEMLGLYFADETQHLDFQTRQWHISPYAQSDLLFKGAIKDRARTVYSGIIKVF 343
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
GA + + +L++ A TIP +E + H AT ++ +E++FY + RGI
Sbjct: 344 EGAQRTDAYQANRNLILSRTARADTIPNLEIGANDVRCTHGATVGQVEEEYIFYLMSRGI 403
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
A+ LIV+GF EV++++P+ E Q+ + ++ +G
Sbjct: 404 GRTEAVKLIVDGFFDEVIERVPVP---EVQETVRAAIARKIG 442
>gi|16080322|ref|NP_391149.1| FeS assembly protein SufD [Bacillus subtilis subsp. subtilis str.
168]
gi|221311215|ref|ZP_03593062.1| hypothetical protein Bsubs1_17741 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315542|ref|ZP_03597347.1| hypothetical protein BsubsN3_17657 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320457|ref|ZP_03601751.1| hypothetical protein BsubsJ_17620 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324741|ref|ZP_03606035.1| hypothetical protein BsubsS_17771 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81342166|sp|O32165|SUFD_BACSU RecName: Full=FeS cluster assembly protein sufD
gi|2635766|emb|CAB15259.1| FeS assembly protein SufD [Bacillus subtilis subsp. subtilis str.
168]
Length = 437
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 108/453 (23%), Positives = 198/453 (43%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ ++ S K EP W+ RL A + + P + + +F + +
Sbjct: 10 DQEYLKSFSEKHQEPAWLKNLRLQALEQAEDLPMPKPDKTKITNWNFTNFAKH------- 62
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
VD E L + E L E + L ++ + D + +ELK G
Sbjct: 63 ------TVDNEPLSSLEDL---TDEVKALIDIENEDKTLYVQRDQTPAHLSLSQELKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ AL++A+ G+F+Y+PK V+ +
Sbjct: 114 VIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F LI+A++ S V+Y+E + ++ + + E++ DNA + Y
Sbjct: 174 AVYVHESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V +RG RG SKI W T + L G+ + G
Sbjct: 234 AVDNL-------SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K + I+ G+ +++ + G + GA+ +
Sbjct: 287 DTKTVVVGRGEQTENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+ +LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVNELPIEGVK--KQLVSV-IERKV 436
>gi|221632407|ref|YP_002521628.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
gi|221156953|gb|ACM06080.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
Length = 445
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 111/463 (23%), Positives = 211/463 (45%), Gaps = 35/463 (7%)
Query: 34 KGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYY 88
+G + + +S +EP W+ E RL A+ + PS W R + D +
Sbjct: 10 RGFTREAVEELSHLLDEPAWLRERRLAAWEIYERTPMPSRTDEEWRRTDIRRLPIDQVVP 69
Query: 89 YAAPKS-IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
+A + GP L E+L G + + DS V T
Sbjct: 70 FAGVGQRVSGPDVLPSALFEIL-----------------GDAALRSGLLVQVDSSVVFTQ 112
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPK 206
+L GV+F + A + P+L+++ T V DN +AAL+ A ++ G+F+Y+P+
Sbjct: 113 LDPQLAAEGVVFTDLLTAARDMPELLQRVFMTEAVKPEDNKFAALHGAFWSGGTFLYVPE 172
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
GV + L ++ G+ F TL++A+ G+ V ++ +P +E + + VVE++
Sbjct: 173 GVEVALPLRSFVWAETPGSAIFAHTLLVAEPGASVVLIDTWASPTVEEPLIASNVVEIIT 232
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
+ A+++Y +Q+W ++NF T+R R ++ + GS ++ + +
Sbjct: 233 GEGAQVRYIQLQDWG-------RSVWNFTTQRALLR-QDVTVNTLNVSLGSRLSKAFIAS 284
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L G + E + ++ Q +D T+ H+A +S ++ KG + + G + V
Sbjct: 285 NLVGPGATAEMLGLYFADDAQHLDHQTRQWHVAPYASSDLLYKGALKDRARTVFSGLIKV 344
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
A + + +L++ A TIP +E + H AT ++ +E++FY + RG
Sbjct: 345 FPQAQRTDAYQANRNLILSPTARADTIPNLEIGANDVRCTHGATVGQVEEEYIFYLMSRG 404
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
I A+ LIV+GF EV++++P E Q+ + ++ +G
Sbjct: 405 ISRPEAVKLIVDGFFDEVIERVP---VTEVQETVRAAIARKIG 444
>gi|296331743|ref|ZP_06874210.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675867|ref|YP_003867539.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296151068|gb|EFG91950.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305414111|gb|ADM39230.1| FeS assembly protein SufD [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 437
Score = 339 bits (870), Expect = 6e-91, Method: Composition-based stats.
Identities = 107/453 (23%), Positives = 198/453 (43%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ ++ S K EP W+ + RL A + + P + + +F + +
Sbjct: 10 DQEYLKSFSEKHQEPAWLKDLRLQALEQAEDLPMPKPDKTKITNWNFTNFAKH------- 62
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
VD E L + E L E + L ++ + D + +ELK G
Sbjct: 63 ------TVDNEPLSSLEDL---TDEVKALIDLENEDKTLYVQRDQTPAYLSLSQELKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ AL++A+ G+F+Y+PK V+ +
Sbjct: 114 VIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F LI+A++ S V+Y+E + ++ + + E++ DNA + Y
Sbjct: 174 AVYVHESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V +RG RG SKI W T + L G+ + G
Sbjct: 234 AVDNL-------SSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K + I+ G+ +++ + G + GA+ +
Sbjct: 287 DTKTVVVGRGEQTENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGI +E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIAKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+ +LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVNELPIEGVK--KQLVSV-IERKV 436
>gi|52081755|ref|YP_080546.1| Fe-S cluster formation protein YurX [Bacillus licheniformis ATCC
14580]
gi|52787142|ref|YP_092971.1| YurX [Bacillus licheniformis ATCC 14580]
gi|319647672|ref|ZP_08001890.1| YurX protein [Bacillus sp. BT1B_CT2]
gi|52004966|gb|AAU24908.1| conserved protein involved in Fe-S cluster formation YurX [Bacillus
licheniformis ATCC 14580]
gi|52349644|gb|AAU42278.1| YurX [Bacillus licheniformis ATCC 14580]
gi|317390013|gb|EFV70822.1| YurX protein [Bacillus sp. BT1B_CT2]
Length = 437
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 190/453 (41%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + ++ S K EP W+ + RL A + + P + + +F +
Sbjct: 10 DREYVKSFSEKHQEPAWLQDLRLEALEKAEDLPLPKPDKTKITNWNFTRFDKHTVEN--- 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + L E + L + + D + +EL+ G
Sbjct: 67 -------------KPLDSLDDLSDEVKSLIDLGNEDKTLYVQRDQTPAYLSLSKELQDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LVKKY V ++ AL++A+ G+F+Y+PK V +
Sbjct: 114 VIFTDIHTAFREHGELVKKYFMKDGVKADEHKLTALHAALLNGGAFLYVPKNVELEAPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F L++AD+ S V+Y+E + + + V E++ NA ++Y
Sbjct: 174 AVYVHESNDTTLFNHVLVVADDNSAVTYVENYISTVNPKEAVFNIVSEVITGANARVQYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V++RG G SKI W T + L G+ + G
Sbjct: 234 AVDNL-------SAGVTAYVSRRGTALGRDSKIEWALGLMNDGDTISENTTNLHGDGTFG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K++ I+ G+ +++ + G + GA+ S
Sbjct: 287 DTKTVVVGRGEQTQNFTTQIIHHGKHSEGYILKHGVMKDSASSIFNGIGKIEHGASKSNA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPVQLYYLMSRGIPKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+ +LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVNELPIEGVK--KQLVSV-IERKV 436
>gi|311069783|ref|YP_003974706.1| FeS assembly protein SufD [Bacillus atrophaeus 1942]
gi|310870300|gb|ADP33775.1| FeS assembly protein SufD [Bacillus atrophaeus 1942]
Length = 437
Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats.
Identities = 107/453 (23%), Positives = 196/453 (43%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ ++ S K+ EP W+ RL A + + P + + +F
Sbjct: 10 DQEYVKSFSEKQQEPAWLKNLRLQALEQAEDLPMPKPDKTKITNWNFTQF---------- 59
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
VD L + E L E + L V+ + + D + +ELK G
Sbjct: 60 ---DKHTVDNAPLSSLEDL---TDEVKALIDVENADKTLYVQRDQTPAYLSLSQELKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ AL++A+ G+F+Y+PK V+ +
Sbjct: 114 VIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F LI+A++ S V+Y+E + + + + E++ DNA + Y
Sbjct: 174 AVYVHESNDTTLFNHVLIVAEDHSSVTYVENYISTVNPKEAVFNIISEVITGDNANVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V +RG RG SKI W T + L G+ + G
Sbjct: 234 AVDNL-------SAGVTTYVNRRGTARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K + I+ G+ +++ + G + GA+ +
Sbjct: 287 DTKTVVVGRGEQTQNFTTQIIHFGKASEGYILKHGVMKDAASSIFNGIGKIEHGASKANA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGI +E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIAKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+++LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVKELPIEGVK--KQLVSV-IERKV 436
>gi|157693678|ref|YP_001488140.1| iron ABC transporter membrane protein [Bacillus pumilus SAFR-032]
gi|157682436|gb|ABV63580.1| iron (Fe) ABC superfamily ATP binding cassette transporter,
membrane protein [Bacillus pumilus SAFR-032]
Length = 437
Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats.
Identities = 105/453 (23%), Positives = 186/453 (41%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++D ++ S K EP WM RL A + + P + + + + +
Sbjct: 10 DQDYVKSFSEKHQEPAWMSSLRLQALEKAEDLPMPKPDKTNISKWNLTNFKQHTVESAP- 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L E + L ++ + V D + E K G
Sbjct: 69 ---------------FGSLEELPEEVKSLIDLEDTDKTVYIQRDQTPAYLSLSTEAKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF + A+ EH DLVKKY T V V ++ AL++A+ G+F+Y+PK V +
Sbjct: 114 VIFTDLHTALREHGDLVKKYFMTDAVKVDEHKLTALHAALVNGGAFLYVPKNVELEAPIQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F +++AD+ S V+Y+E + + E + V E+ NA + Y
Sbjct: 174 AVYLHENDDTTLFNHVIVVADDHSSVTYVENYISTAKPEEAIFNIVSEVFTGANARVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G + +V +RG G SKI W L G+ + G
Sbjct: 234 AVDNLSEG-------VTVYVNRRGMASGRDSKIEWALGLMNDGDVVSENITKLMGDGTFG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ S+ + G Q + T ++H KN+ I+ G+ +++ + G + GA S
Sbjct: 287 DTKSVVVGRGNQTENFTTSIIHFGKNSEGYILKHGVMKDQASSIFNGIGKIEHGATKSNA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGI +E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGISKEDAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+++LP+E ++L+ + +E V
Sbjct: 407 VIYGFLNPVVKELPIEGVK--KQLVSV-IERKV 436
>gi|308175000|ref|YP_003921705.1| SufD [Bacillus amyloliquefaciens DSM 7]
gi|307607864|emb|CBI44235.1| SufD [Bacillus amyloliquefaciens DSM 7]
gi|328554968|gb|AEB25460.1| SufD [Bacillus amyloliquefaciens TA208]
gi|328913322|gb|AEB64918.1| Fe-S cluster assembly protein SufD [Bacillus amyloliquefaciens LL3]
Length = 437
Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats.
Identities = 105/453 (23%), Positives = 196/453 (43%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ ++ S K EP W+ RL A + + P + + +F
Sbjct: 10 DQEYVKGFSEKHQEPAWLKNLRLQALEKAEDLPLPKPDKTKITNWNFTKF---------- 59
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ V+ L + E L E + L ++ + D + +ELK G
Sbjct: 60 ---NKHTVENAPLASLEDLA---DEAKALIDIENEDKTLYVQRDQTPAFLSLSKELKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ AL++A+ G+F+Y+PK V+ +
Sbjct: 114 VIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALMNGGAFLYVPKNVQVETPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F LI+A++ S V+Y+E + + + + E++ DNA + Y
Sbjct: 174 AVYVHESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKEAVFNIISEVITGDNASVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V +RG RG S+I W T + L G+ + G
Sbjct: 234 AVDNL-------SAGVTTYVNRRGAARGRDSRIEWALGLMNDGDTISENTTNLYGDGTYG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K + I+ G+ +++ + G + GA+ +
Sbjct: 287 DTKTVVVGRGEQTENFTTQIIHFGKASEGYILKHGVMKDAASSIFNGIGKIEHGASKANA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+++LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVKELPIEGVK--KQLVSV-IERKV 436
>gi|154687379|ref|YP_001422540.1| YurX [Bacillus amyloliquefaciens FZB42]
gi|154353230|gb|ABS75309.1| YurX [Bacillus amyloliquefaciens FZB42]
Length = 437
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 106/453 (23%), Positives = 196/453 (43%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ ++ S K EP W+ RL A + + P + + +F
Sbjct: 10 DQEYVKGFSEKHQEPAWLKNLRLQALEKAEDLPLPKPDKTKITNWNFTKF---------- 59
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ V+ L + E L E + L ++ + D + +ELK G
Sbjct: 60 ---NKHTVENAPLASLEDLA---DEAKALIDIENEDKTLYVQRDQTPAFLSLSKELKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ AL++A+ G+F+Y+PK V+ +
Sbjct: 114 VIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALMNGGAFLYVPKNVQVETPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F LI+A++ S V+Y+E + + + + E+V DNA + Y
Sbjct: 174 AVYVHESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKEAVFNIISEVVTGDNASVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G+ +V +RG RG S+I W T + L G+ + G
Sbjct: 234 AVDNL-------SAGVTTYVNRRGAARGRDSRIEWALGLMNDGDTISENTTNLYGDGTYG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T+++H K + I+ G+ +++ + G + GA+ +
Sbjct: 287 DTKTVVVGRGEQTENFTTQIIHFGKASEGYILKHGVMKDAASSIFNGIGKIEHGASKANA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+++LP+E ++L+ + +E V
Sbjct: 407 VIYGFLAPVVKELPIEGVK--KQLVSV-IERKV 436
>gi|253773360|ref|YP_003036191.1| SufBD protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|242377410|emb|CAQ32159.1| SufA-SufB partial fusion protein [Escherichia coli BL21(DE3)]
gi|253324404|gb|ACT29006.1| SufBD protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253977840|gb|ACT43510.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
Length = 336
Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats.
Identities = 201/295 (68%), Positives = 246/295 (83%), Gaps = 1/295 (0%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+ +DG+F+Y+PKGVRCPMELSTYFRIN + TGQFERT+++ADE SYVSY+EGC+AP RD
Sbjct: 43 LASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDS 102
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
QLHAAVVE++ NAE+KYSTVQNW+PGD+ GGI NFVTKR C G SK+SWTQ E
Sbjct: 103 YQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNN-TGGILNFVTKRALCEGENSKMSWTQSE 161
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
TGSAITWKYPSC+LRG+ S GEFYS+A+++G QQ D+GTKM+H+ KNT S I+SKGISAG
Sbjct: 162 TGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAG 221
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
S N+YRG V + A ++RNFTQCDS+LIG NCGAHT PY+E +N+S LEHEATTS+I
Sbjct: 222 HSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRI 281
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYCLQRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 282 GEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 336
>gi|194015609|ref|ZP_03054225.1| FeS assembly protein SufD [Bacillus pumilus ATCC 7061]
gi|194013013|gb|EDW22579.1| FeS assembly protein SufD [Bacillus pumilus ATCC 7061]
Length = 437
Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats.
Identities = 105/453 (23%), Positives = 186/453 (41%), Gaps = 27/453 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++D ++ S K EP WM RL A + + P + + + + +
Sbjct: 10 DQDYVKSFSEKHQEPAWMSSLRLQALEKAEDLPMPKPDKTNISKWNLTNFKQHTVESAP- 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L E + L ++ + V D + E K G
Sbjct: 69 ---------------FGSLEELPEEVKSLIDLEDTDKTVYIQRDQTPAYLSLSTEAKDKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF + A+ EH DLVKKY T V V ++ AL++A+ G+F+Y+PK V +
Sbjct: 114 VIFTDLHTALREHGDLVKKYFMTDAVKVDEHKLTALHAALVNGGAFLYVPKNVELEAPIQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F +++AD+ S V+Y+E + + E + V E+ NA + Y
Sbjct: 174 AIYLHENDDTTLFNHVIVVADDHSAVTYVENYISTAKPEEAIFNIVSEVFTGANARVTYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G + +V +RG G SKI W L G+ + G
Sbjct: 234 AVDNLSEG-------VTVYVNRRGMASGRDSKIEWALGLMNDGDVVSENITKLMGDGTFG 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ S+ + G Q + T ++H KN+ I+ G+ +++ + G + GA S
Sbjct: 287 DTKSVVVGRGNQTENFTTSIIHFGKNSEGYILKHGVMKDQASSIFNGIGKIEHGATKSNA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGI +E A L
Sbjct: 347 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGISKEDAERL 406
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ V+++LP+E ++L+ + +E V
Sbjct: 407 VIYGFLNPVVKELPIEGVK--KQLVSV-IERKV 436
>gi|269926802|ref|YP_003323425.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
gi|269790462|gb|ACZ42603.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
Length = 434
Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats.
Identities = 106/458 (23%), Positives = 200/458 (43%), Gaps = 44/458 (9%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYA 90
++ + + +S NEP+W + RL A+ + P+ W R A++FD+
Sbjct: 13 ISRETVINLSESLNEPEWFRDLRLRAWEAFENTPMPTLQDEEWRRTDIRALNFDNF---- 68
Query: 91 APKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKE 150
V E +Y +P ++ +G D V + +
Sbjct: 69 ------------QVPLEASSSY----LPESSEDHRSGFA-------QFVDGRLVQSWLDD 105
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
L GVI +S A E+PDL+++YL +VVP + +AAL +A G FVY+P V+
Sbjct: 106 SLAAKGVIMTDLSTAAREYPDLLRQYLFSVVPDAYSKFAALANAFGN-GVFVYVPNNVQV 164
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV--ELVALD 268
+ + F ++ G F R+L++A+ GS ++ +E + +V E+VA +
Sbjct: 165 DLPVQISFTLSSPGLAVFPRSLVVAERGSSLAIIERYYTEDWKDEPESLSVAGAEVVAGE 224
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
++++Y +VQ ++F+ +R ++ + + G ++ ++
Sbjct: 225 GSQLRYVSVQELG-------RNFWHFLVQRHKVL-KDAQENSLNIGLGGKLSKSNVETIM 276
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
+ E I + Q D T H N TS ++ KG+ + + G + V
Sbjct: 277 AEKGGVSELLGIYFGDDSQFFDYHTLQDHAQPNCTSDLLYKGVLKDTARAVFSGLIKVRP 336
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
GA + + +LL+ ++ A +IP +E + + H A+ I E LFY + RG+
Sbjct: 337 GAQKTDAYQTNRNLLLSDSARADSIPNLEIEANDVRCSHGASVGPIDKEQLFYLMARGLS 396
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
+AA +IV+GF ++ ++P+E + ID +E
Sbjct: 397 RKAAERMIVDGFFEPIVNRIPLEGVRDRLLAAIDKKME 434
>gi|466882|gb|AAA17127.1| pps1 [Mycobacterium leprae]
Length = 869
Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats.
Identities = 133/305 (43%), Positives = 191/305 (62%), Gaps = 11/305 (3%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
+NF A A SF+Y+P GV + L YFRIN + GQFERTLIIAD GSYV Y+
Sbjct: 576 ENFVANGIVA---HNSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADTGSYVHYV 632
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP + LH+AVVE++ +A ++Y+T+QNW +YN VTKR
Sbjct: 633 EGCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNNVYNLVTKRARV-ET 684
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S
Sbjct: 685 GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLASNTSS 744
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
IVSK ++ G +YRG V V++GA SR+ +CD+LL+ + T PY++ +
Sbjct: 745 NIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVT 804
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +
Sbjct: 805 MGHEATVSKVSENQLFYLMSRGLAEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQM 864
Query: 485 EGSVG 489
EG+VG
Sbjct: 865 EGAVG 869
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 18/212 (8%)
Query: 1 MVAVRETVD--------KVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNE 50
M ET + + ID + +Y YG+ ++++ A +GL+ED++R ISAKK+E
Sbjct: 1 MTRTSETTKSPAPELLTQQQAIDSLGKYGYGWADSDVAGASARRGLSEDVVRDISAKKDE 60
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+WML+ RL A R + P W IDFD++ Y+ D++ ++
Sbjct: 61 PEWMLQARLKALRVFERKPMPRWGS-NLDGIDFDNIKYFVRSTEKQAAS-WDELPEDIRN 118
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
TY++LGIP E++ L V A ++S V + +LK GV+F+ + E+P
Sbjct: 119 TYDRLGIPDAEKQRLV------AGVAAQYESEVVYHQIRADLKDQGVVFLDTETGLREYP 172
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFV 202
D+ K+YL TV+P GDN ++ALN+AV++ G
Sbjct: 173 DIFKQYLGTVIPAGDNKFSALNTAVWSGGCLT 204
>gi|15827239|ref|NP_301502.1| hypothetical protein ML0593 [Mycobacterium leprae TN]
gi|221229717|ref|YP_002503133.1| hypothetical protein MLBr_00593 [Mycobacterium leprae Br4923]
gi|13432282|sp|Q49689|Y593_MYCLE RecName: Full=UPF0051 protein ML0593; Contains: RecName: Full=Mle
pps1 intein
gi|2398706|emb|CAB16171.1| hypothetical protein MLCL536.28c [Mycobacterium leprae]
gi|13092788|emb|CAC30101.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932824|emb|CAR70686.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 869
Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats.
Identities = 133/305 (43%), Positives = 191/305 (62%), Gaps = 11/305 (3%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
+NF A A SF+Y+P GV + L YFRIN + GQFERTLIIAD GSYV Y+
Sbjct: 576 ENFVANGIVA---HNSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADTGSYVHYV 632
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
EGCTAP + LH+AVVE++ +A ++Y+T+QNW +YN VTKR
Sbjct: 633 EGCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNNVYNLVTKRARV-ET 684
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W GS +T KYP+ + GE + GE S+A + Q D+G KMLHLA NT+S
Sbjct: 685 GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLASNTSS 744
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
IVSK ++ G +YRG V V++GA SR+ +CD+LL+ + T PY++ +
Sbjct: 745 NIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVT 804
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
+ HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPME+A+E +LI++ +
Sbjct: 805 MGHEATVSKVSENQLFYLMSRGLAEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQM 864
Query: 485 EGSVG 489
EG+VG
Sbjct: 865 EGAVG 869
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 18/212 (8%)
Query: 1 MVAVRETVD--------KVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNE 50
M ET + + ID + +Y YG+ ++++ A +GL+ED++R ISAKK+E
Sbjct: 1 MTRTSETTKSPAPELLTQQQAIDSLGKYGYGWADSDVAGASARRGLSEDVVRDISAKKDE 60
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+WML+ RL A R + P W IDFD++ Y+ D++ ++
Sbjct: 61 PEWMLQARLKALRVFERKPMPRWGS-NLDGIDFDNIKYFVRSTEKQAAS-WDELPEDIRN 118
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
TY++LGIP E++ L V A ++S V + +LK GV+F+ + E+P
Sbjct: 119 TYDRLGIPDAEKQRLV------AGVAAQYESEVVYHQIRADLKDQGVVFLDTETGLREYP 172
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFV 202
D+ K+YL TV+P GDN ++ALN+AV++ G
Sbjct: 173 DIFKQYLGTVIPAGDNKFSALNTAVWSGGCLT 204
>gi|253577640|ref|ZP_04854949.1| FeS assembly protein SufD [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251842967|gb|EES71006.1| FeS assembly protein SufD [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 433
Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats.
Identities = 100/447 (22%), Positives = 199/447 (44%), Gaps = 28/447 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ ++ +SAK+ EPDW+ + R A + ++ P + R D + A
Sbjct: 12 EQLKQLSAKRGEPDWLTDSRTKALQLAAELELPQLEKTRIDRWDLSNFGTLA-------- 63
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++ + +L + + L + +L ++ +V T EL GVI
Sbjct: 64 EARVENPQQLPDSIQSLVDLTEQSNLLV-----------QRNADTVFTKLAPELASQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
F + A+ EH DLVK +L +V+ +N AAL++A++ G F+Y+PK V L T F
Sbjct: 113 FTDLETAVREHGDLVKAHLHSVIKPDENRLAALHAALWNGGVFLYVPKNVVIDTPLQTIF 172
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+++ G+ LI+AD S V+Y++ + + + +H E++ A+++++TV
Sbjct: 173 LLDDAGSAFTPHVLIVADTNSQVTYVDNYISVNLNGSIVHNGAAEVIVKPGAKVQFATVH 232
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + VT R I W E + + +L+G S +
Sbjct: 233 HLAEQATD--------VTYRRAVVENDGSIEWIIGEMNNGDSASETLSILKGNGSNSDAK 284
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
IA+ +G Q+++ TK +H K++ S+++++ + + G + +GA +
Sbjct: 285 VIAVGSGKQRLNYTTKAVHYGKSSNSQMITRAVMREEATAIINGITKIEKGATKADGQQT 344
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ P + + H A+ +++ E ++Y + RGI A L++
Sbjct: 345 EKVLMLSPKARGDANPILLIDEDDVSAGHAASVGQVNPEQIYYLMSRGITRAEAERLVIY 404
Query: 459 GFVREVLQKLPME-FAVEAQKLIDISL 484
GF+ V+ +P+E + Q L++ L
Sbjct: 405 GFLAPVVSDIPLEPLQKQLQGLVERKL 431
>gi|401491|sp|Q02857|YCF24_ANTSP RecName: Full=UPF0051 protein in atpA 3'region; AltName: Full=ORF 3
gi|14179|emb|CAA44986.1| ORF3 [Antithamnion sp.]
Length = 297
Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats.
Identities = 198/297 (66%), Positives = 242/297 (81%)
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
SA F+ GSF YIP CP+ELSTYFRIN K +GQFERTLIIAD+ SYVSYLEGCTAPQ
Sbjct: 1 SATFSHGSFCYIPPDTHCPLELSTYFRINNKESGQFERTLIIADKNSYVSYLEGCTAPQF 60
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
D NQLHAAVVELVAL+NA IKYSTVQNWY G+ +G+GGIYNFVTKRG C G SKI WTQ
Sbjct: 61 DNNQLHAAVVELVALENATIKYSTVQNWYAGNEKGQGGIYNFVTKRGICIGNNSKILWTQ 120
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+ETGSAITWKYPSC+L G S GEF SIA++N +QQ D+G+KM+H+ KNT SRI+SKGIS
Sbjct: 121 VETGSAITWKYPSCILAGHNSIGEFSSIALTNNYQQADTGSKMIHIGKNTKSRILSKGIS 180
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
AG+S N+YRG V + A +SRN++QCDSLL+ N A+T PYI+++N +EHEA+TS
Sbjct: 181 AGYSANSYRGLVKIGPKAHYSRNYSQCDSLLLSNTSKANTFPYIQAQNPYTKIEHEASTS 240
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
KI +E +FY LQRGI E AI+L+++GF +EVL +LPMEFAVEA +L+++ LEG+VG
Sbjct: 241 KIGEEQIFYFLQRGINLENAISLMISGFCKEVLNELPMEFAVEADRLLNLKLEGTVG 297
>gi|212640285|ref|YP_002316805.1| cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
gi|212561765|gb|ACJ34820.1| Cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
Length = 434
Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats.
Identities = 108/452 (23%), Positives = 196/452 (43%), Gaps = 28/452 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ +R S + EPDW+L RL A + + P + + +F + +
Sbjct: 10 DQQYVRSFSEGRGEPDWLLNVRLQALAQAEQLPLPKPDKTKIDRWNFTQFSTHLVESAP- 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L E ++L + + V D + +ELK+ G
Sbjct: 69 ---------------LSSLEELPEEVKVLIDIDEEQKNVYVQRDHTCAYASLADELKEKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF ++ A+ EH DLV+KY V V ++ AAL++A+ G FVY+PK V+ + L
Sbjct: 114 VIFTDLATAVREHSDLVEKYFMNGVKVNEHRLAALHAALVNGGVFVYVPKHVQIDVPLQA 173
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ + F +I+AD GS V+Y+E + + + E+ ALD+A++ +
Sbjct: 174 VYVHEKAE-ALFNHVIIVADVGSKVTYVENYISTCERSEAIVNIIAEVFALDDAQVFFGA 232
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V + G +V +RG G ++I W T L G+ S G+
Sbjct: 233 VDSLAKG-------TTTYVNRRGIT-GRHARIEWALGLMNDGNTISENITRLIGDGSFGD 284
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
++ +S G Q + T ++H K+T I+ G+ + + + G + GA+ S
Sbjct: 285 TKTVVVSRGEQVQNFTTSVIHYGKHTEGYILKHGVVKDEATSIFNGIGKIEHGASKSNAE 344
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ P + H A+ ++ L+Y + RGIP+ A LI
Sbjct: 345 QESRVLMLSPKARGDANPILLIDEDDVTAGHAASVGRVDPTQLYYLMSRGIPKTEAERLI 404
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++GF+ V+ ++P+E ++LI++ +E V
Sbjct: 405 IHGFLAPVVNEIPIERVK--KQLIEV-IERKV 433
>gi|229543310|ref|ZP_04432370.1| FeS assembly protein SufD [Bacillus coagulans 36D1]
gi|229327730|gb|EEN93405.1| FeS assembly protein SufD [Bacillus coagulans 36D1]
Length = 436
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 106/453 (23%), Positives = 192/453 (42%), Gaps = 28/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
NE +R S + EP+W+ E+RL A+ R + P + + +F ++ +
Sbjct: 10 NEQDVRTFSEQNGEPEWLKEFRLQAFARAQVLPLPEVDKTKLNKWNFTQFTDFSVEST-- 67
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
TY L + + L ++ +K + + + E K G
Sbjct: 68 --------------TYSALNELPEKVKALVDLENAKQNLYIQHNQTPAYLSLSESAKAQG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VI I A+ HP+LV+K+ T V V ++ AL++A+ G+F+Y+PK V +
Sbjct: 114 VILTDILTAVKVHPELVQKFFMTEAVKVDEHRLTALHAALMNGGTFLYVPKNVVLEEPVQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + + F L++A+E S V+Y+E + + + E++A NA+I+Y
Sbjct: 174 AIYVHDHETAPLFNHVLVVAEENSAVTYVENYISANDGAKGIVNIITEVIAGANAKIEYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V G + +V +RG G ++I W T + L G+ S
Sbjct: 234 AVDTLAKG-------VTTYVNRRG-YTGRDAQIEWALGMMNDGNTISDNTTNLVGDGSVS 285
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
++ +S G Q + T++ H KNT S I+ G+ S + G + GA+ S
Sbjct: 286 HSKTVVVSRGKQTQNFTTRITHFGKNTESFILKHGVVKDASTMIFNGIGKIEHGASKSDA 345
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGI + A L
Sbjct: 346 EQESRVLMLSEKARGDANPMLLIDEDDVMAGHAASVGRVDPVQLYYLMSRGISKNEAERL 405
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
I++GF+ V+ +LP+E +K + +E V
Sbjct: 406 IIHGFLAPVVTQLPIES---VKKQLTEVIERKV 435
>gi|15616032|ref|NP_244337.1| hypothetical protein BH3470 [Bacillus halodurans C-125]
gi|10176093|dbj|BAB07189.1| BH3470 [Bacillus halodurans C-125]
Length = 435
Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats.
Identities = 107/454 (23%), Positives = 199/454 (43%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++++ ++ S +NEP W + RL + T++ P + + + +F +
Sbjct: 9 IDKEYVQSFSDARNEPQWFKDIRLKGFELVETLELPKPDKTKITSWNFTNF--------- 59
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
D PE+ + E + L G + + D+ V + E LK
Sbjct: 60 ------DHKLPEVSPV-ASIDELRDEVKGLIGEASDTQNLLVQRDATVVYSKLDEALKAK 112
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF + A+ EH DLV+KY V V +N AL++A+ G+F+Y+P+ V + L
Sbjct: 113 GVIFTDLLTAVKEHGDLVEKYYMKDAVKVDENRLTALHAALVNGGTFIYVPRNVEIEVPL 172
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ F + + G F +I+A++ S ++Y+E A E + VVE+ A NA++ +
Sbjct: 173 QSVFWFDTEKAGLFNHVIIVAEDNSSITYVENY-ASFGSEEAVANIVVEVFAGANAKVSF 231
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V N G + +V +R G S++ W + T + L G+ S
Sbjct: 232 GAVDNLAAG-------VTTYVVRRAHV-GRDSRVEWALGQMNDGNTVSENTTHLLGDNSW 283
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ ++++ G Q+ + T++ H K++ I+ G+ + + + G + GA S
Sbjct: 284 ADTKTVSVGRGEQKQNFTTQIFHHGKHSEGYILKHGVMREAATSIFNGISKIEHGATKSH 343
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
L++ P + H A+ KI +FY + RGI A
Sbjct: 344 GEQTERVLMLSEKARGDANPILLIDEDDVTAGHAASVGKIDPIQMFYLMSRGISRAEAER 403
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+ +LP+E E +L++ +E V
Sbjct: 404 LVIHGFLAPVVGQLPIESVKE--RLVEA-IERKV 434
>gi|145590962|ref|YP_001152964.1| FeS assembly protein SufB [Pyrobaculum arsenaticum DSM 13514]
gi|145282730|gb|ABP50312.1| FeS assembly protein SufB [Pyrobaculum arsenaticum DSM 13514]
Length = 489
Score = 325 bits (834), Expect = 8e-87, Method: Composition-based stats.
Identities = 170/481 (35%), Positives = 260/481 (54%), Gaps = 22/481 (4%)
Query: 5 RETVDKVRKIDVDQYKYGFETNIQVDKAPKG-LNEDIIRFISAKKNEPDWMLEWRLLAYR 63
+ T+ V ++ G E KG + D++ IS K EPDWM RL
Sbjct: 23 KSTITHVESVEE---ALGVEKKFSYQVELKGHITRDMVEEISRLKGEPDWMRRLRLRMLE 79
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ + P W R ID + L +YA P++ S D V E+ YEKLG+P E +
Sbjct: 80 LFEKLPTPKWVRA-VEEIDLEALVHYAKPQT-ETVSSWDQVPKEIREYYEKLGLPEIEAK 137
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L G + A FDS + K++L++ GVI +P+ EA+ +PDLV+KY V P
Sbjct: 138 ALLG-------LGAQFDSEIIYFNLKKKLQEKGVIMLPMEEAVRRYPDLVQKYFMRVFPP 190
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
++ +AAL+ A+++ G F+Y+P GVR L T+F I + Q E ++++AD+G+YV +
Sbjct: 191 -EHKFAALHGALWSGGVFIYVPPGVRIEQPLETFFFIGQSMESQMEHSIVVADKGAYVHW 249
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP+ + H +VE A + A +K +TVQNW + NF KR
Sbjct: 250 IEGCSAPRLLKYSFHDGMVEGYAHEGATLKITTVQNW-------SRNVINFNNKRAIAEA 302
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+K+ W + GS T+ +PS +L+GE + E I + G ++G K+ HLA T+
Sbjct: 303 -GAKVHWVEGSIGSKTTYTFPSTVLKGEGASTEIVGITAAKGPYWKENGAKVWHLAPRTS 361
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SR+V+K ISA YRG V V +GA H+R+ QCDSL++ + T+P+ + +
Sbjct: 362 SRVVNKSISAEGGVVVYRGVVHVQKGAKHARSHVQCDSLVLDKDSATLTVPHDQVFEETA 421
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+ HEAT S IS+E L Y RG E+ A A IV GFV ++L+ LP E+AV ++I++
Sbjct: 422 VVTHEATASSISEEKLAYLRARGFTEDDAKAAIVLGFVGDILKDLPFEYAVVLGRVIELE 481
Query: 484 L 484
Sbjct: 482 F 482
>gi|309793450|ref|ZP_07687877.1| FeS assembly protein SufB [Escherichia coli MS 145-7]
gi|308123037|gb|EFO60299.1| FeS assembly protein SufB [Escherichia coli MS 145-7]
Length = 388
Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats.
Identities = 205/376 (54%), Positives = 266/376 (70%), Gaps = 24/376 (6%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G
Sbjct: 293 N-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSG 351
Query: 346 FQQIDSGTKMLHLAKN 361
QQ D+GTKM+H+ K
Sbjct: 352 HQQADTGTKMIHIGKT 367
>gi|108803021|ref|YP_642958.1| Iron-regulated ABC transporter permease SufD [Rubrobacter
xylanophilus DSM 9941]
gi|108764264|gb|ABG03146.1| Iron-regulated ABC transporter permease protein SufD [Rubrobacter
xylanophilus DSM 9941]
Length = 453
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 120/463 (25%), Positives = 211/463 (45%), Gaps = 35/463 (7%)
Query: 33 PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLY 87
KG+ + ++ ++A K+EP W+ E RL A+R + + P+ W + F++
Sbjct: 12 RKGIGIEAVKALAAFKDEPGWLREKRLAAWRTFEEIPMPTMRDEAWRYTDVSDVRFEEYV 71
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
YA + L D L++ E A+ +S +
Sbjct: 72 PYAPSPDVEREGDLPDAVQRLIKEGE-----------------ENSALLVQHNSETTYAR 114
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
E L+ GVIF + A+ EH +LV++ L +VP G + +AAL++A F+ GSF+Y+P+G
Sbjct: 115 TDEALRARGVIFTDLHTALREHGELVRERLFRLVPEGYDKFAALSAAAFSGGSFLYVPRG 174
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
V + + +Y ++ G RTL+I +EG+ V+Y++ + +E L VEL
Sbjct: 175 VEVEVPIQSYRWLDVAG-SIMPRTLVIVEEGASVTYIDEYASEDGEEPALSNGAVELFVG 233
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
A ++Y ++QNW + +F T R + I+ + G+ ++
Sbjct: 234 QGAHLQYVSLQNWA-------RNVVHFNTIRSQA-EKDATINSLVVSFGAQLSRTNVEAG 285
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L S E + ++ Q ID T H+A S ++ KG S + G + V
Sbjct: 286 LTAPGSDSEMLGLYFADEDQLIDHHTLQDHIAPQAHSDLLYKGALRDESLTVFSGLIRVE 345
Query: 388 RGAAHSRNFTQCDSLLIG-NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
GA + + +L++G + A ++P +E H ATT ++ D LFY + RG
Sbjct: 346 PGAQKTDAYQTNRNLILGTDEAMAVSLPNLEIMADDVKCSHGATTGQVDDLELFYLMSRG 405
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IP A L+V GF EV ++P+ ++ +D ++E +G
Sbjct: 406 IPRIEAEKLVVFGFFGEVTSRIPL---RGLKEKLDRAIEEKIG 445
>gi|261420432|ref|YP_003254114.1| FeS assembly protein SufD [Geobacillus sp. Y412MC61]
gi|319768099|ref|YP_004133600.1| FeS assembly protein SufD [Geobacillus sp. Y412MC52]
gi|261376889|gb|ACX79632.1| FeS assembly protein SufD [Geobacillus sp. Y412MC61]
gi|317112965|gb|ADU95457.1| FeS assembly protein SufD [Geobacillus sp. Y412MC52]
Length = 436
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 109/452 (24%), Positives = 190/452 (42%), Gaps = 27/452 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+E IR S+ + EPDW+ RL A R + P + + +F + +A
Sbjct: 10 DETYIRTFSSGRGEPDWLTARRLEALRLAERLPLPKPEKTKIDKWNFTE---FARHTVDS 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
P Y+ L + L + + + +ELK+ G
Sbjct: 67 AP-------------YDGLDDLPEAVKALIEAGEGTKNLYVQRNHTPAYVSLSDELKEKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF I A EH DL+K YL T V ++ AAL++A+ G FVY+PK V L
Sbjct: 114 VIFTDIFTAAREHGDLLKNYLMTAVKPDEHRLAALHAALLNGGVFVYVPKNVEIETPLQA 173
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ +E F +++A++ S V ++E + R+ + V E+ A NA + ++
Sbjct: 174 VYIQDEDDIALFNHVIVVAEDNSRVVFVENYISASREGKAVVNVVAEVFAQANASVFFAA 233
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V + G +V +RG G +I W T L G+ S G+
Sbjct: 234 VDHLAKG-------TTTYVNRRGIA-GRDGRIEWALGLMNDGNTVSENITRLVGDGSFGD 285
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
++A+S G Q + T ++H ++T I+ G+ + + + G + GA+ S
Sbjct: 286 TKTVAVSRGEQVQNFTTSVVHYGRHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNAD 345
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ P + H A+ ++ L+Y + RGIP A LI
Sbjct: 346 QESRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPRRDAERLI 405
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++GF+ V++ +P+E +LI++ +E V
Sbjct: 406 IHGFLAPVVEAIPLEGVK--NQLIEV-IERKV 434
>gi|297528867|ref|YP_003670142.1| FeS assembly protein SufD [Geobacillus sp. C56-T3]
gi|297252119|gb|ADI25565.1| FeS assembly protein SufD [Geobacillus sp. C56-T3]
Length = 436
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 109/452 (24%), Positives = 190/452 (42%), Gaps = 27/452 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+E IR S+ + EPDW+ RL A R + P + + +F + +A
Sbjct: 10 DETYIRTFSSGRGEPDWLTARRLEALRLAERLPLPKPEKTKIDKWNFTE---FARHTVDS 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
P Y+ L + L + + + +ELK+ G
Sbjct: 67 AP-------------YDGLDDLPEAVKALIEAGEGTKNLYVQRNHTPAYVSLSDELKEKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF I A EH DL+K YL T V ++ AAL++A+ G FVY+PK V L
Sbjct: 114 VIFTDIFTAAREHGDLLKNYLMTAVKPDEHRLAALHAALLNGGVFVYVPKNVEIETPLQA 173
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ +E F +++A++ S V ++E + R+ + V E+ A NA + ++
Sbjct: 174 VYIQDEDDIALFNHVIVVAEDNSRVVFVENYISASREGKAVVNVVAEVFAQANASVFFAA 233
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V + G +V +RG G +I W T L G+ S G+
Sbjct: 234 VDHLAKG-------TTTYVNRRGIA-GRDGRIEWALGLMNDGNTVSENITRLVGDGSFGD 285
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
++A+S G Q + T ++H ++T I+ G+ + + + G + GA+ S
Sbjct: 286 TKTVAVSRGEQVQNFTTSVVHYGRHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNAE 345
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ P + H A+ ++ L+Y + RGIP A LI
Sbjct: 346 QESRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPRRDAERLI 405
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++GF+ V++ +P+E +LI++ +E V
Sbjct: 406 IHGFLAPVVEAIPIEGVK--NQLIEV-IERKV 434
>gi|319650437|ref|ZP_08004578.1| YurX protein [Bacillus sp. 2_A_57_CT2]
gi|317397848|gb|EFV78545.1| YurX protein [Bacillus sp. 2_A_57_CT2]
Length = 436
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 100/453 (22%), Positives = 185/453 (40%), Gaps = 28/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ + S EP W+ E RL A + P + + +F +
Sbjct: 10 DKEYVSSFSKDMGEPAWLTELRLNALANAENLPMPKPDKTKIDKWNFTQFEKHIVGS--- 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L + L + + ++ +EL++ G
Sbjct: 67 -------------EDFSSLNDLPEDVRNLIDTEAGDQNLYIQRNNRPTYLAVSKELQEKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DL++KY V ++ AL++A+F G+F+YIPK V +
Sbjct: 114 VIFTDIFTAAREHGDLLQKYFMKDGVKTDEHRLTALHAALFNGGAFLYIPKNVEVSAPIQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ ++K F L+ AD+ S V+Y+E + + N + V E++A NA ++Y
Sbjct: 174 AVYIHDDKEANLFNHVLVAADDNSSVTYVENYVSTVEEANGIFNIVTEVIANANASVQYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V G +V +RG G ++I W T + L G+ S G
Sbjct: 234 AVDTLAKG-------TTAYVNRRGVA-GRDARIEWALGLMNDGNTVSENTTNLIGDGSFG 285
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + TK++H KN+ I+ G+ +++ + G + GA+ S
Sbjct: 286 DTKTVVVGRGEQTQNFTTKVVHFGKNSEGYILKHGVMKDSASSIFNGIGKIEHGASKSNA 345
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGI ++ A L
Sbjct: 346 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGISQKEAERL 405
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ LP+E +K + +E V
Sbjct: 406 VIHGFLAPVVNALPIEG---VKKQLTAVIERKV 435
>gi|56421529|ref|YP_148847.1| hypothetical protein GK2994 [Geobacillus kaustophilus HTA426]
gi|56381371|dbj|BAD77279.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 436
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 109/452 (24%), Positives = 189/452 (41%), Gaps = 27/452 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+E IR S+ + EPDW+ RL A R + P + + +F + +A
Sbjct: 10 DETYIRTFSSGRGEPDWLTARRLEALRLAERLPLPKPEKTKIDKWNFTE---FARHTVDS 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
P Y+ L + L + + + +ELK+ G
Sbjct: 67 AP-------------YDGLDDLPEAVKALIEAGEGTKNLYVQRNHTPAYVSLSDELKEKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF I A EH DL+K YL T V ++ AAL++A+ G FVY+PK V L
Sbjct: 114 VIFTDIFTAAREHGDLLKNYLMTAVKPDEHRLAALHAALLNGGVFVYVPKNVEIETPLQA 173
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ +E F +I+A++ S V ++E + R+ + E+ A NA + ++
Sbjct: 174 VYIQDEDDIALFNHVIIVAEDNSRVVFVENYISASREGKAVVNVAAEVFAQANASVFFAA 233
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V + G +V +RG G +I W T L G+ S G+
Sbjct: 234 VDHLAKG-------TTTYVNRRGIA-GRDGRIEWALGLMNDGNTVSENITRLVGDGSFGD 285
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
++A+S G Q + T ++H ++T I+ G+ + + + G + GA+ S
Sbjct: 286 TKTVAVSRGEQVQNFTTSVVHYGRHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNAD 345
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ P + H A+ ++ L+Y + RGIP A LI
Sbjct: 346 QESRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPRRDAERLI 405
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++GF+ V++ +P+E +LI++ +E V
Sbjct: 406 IHGFLAPVVEAIPLEGVK--NQLIEV-IERKV 434
>gi|317130126|ref|YP_004096408.1| FeS assembly protein SufD [Bacillus cellulosilyticus DSM 2522]
gi|315475074|gb|ADU31677.1| FeS assembly protein SufD [Bacillus cellulosilyticus DSM 2522]
Length = 435
Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats.
Identities = 107/453 (23%), Positives = 190/453 (41%), Gaps = 29/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ + S + EP W+ + R+ + + T+ P + + +F L
Sbjct: 10 DQSSVTSFSKDRQEPKWLTDLRVSSIEKASTLDLPKPDKTKITKWNFTPLS--------- 60
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++T + E + L G + + A + V+ T +L G
Sbjct: 61 --------LEANVQTSGQFAELSDEVKGLIGDEEKIQNLLAQKNGVTTFTNVSSDLASKG 112
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A+ EH DLV+KY + V +N AL++A+ G+F+Y+PK V+ + L
Sbjct: 113 VIFTDIETALKEHADLVEKYFMSEAVLPDENRLTALHTALLNGGTFIYVPKNVQVDVPLQ 172
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ E G F LI+A+ S V+Y+E + + V E+ D A + +
Sbjct: 173 AVYAQ-EGQFGLFNHVLIVAEANSSVTYIENYVTEGQAVETVANIVAEVYVEDGATVNFG 231
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N+ +V +RG G +K+ W + T + L GE S
Sbjct: 232 AVDNF-------STATTTYVNRRGQVNGKDAKLYWALGQMNDGNTVSENTTYLHGEGSYA 284
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++AI G Q + T ++H K++ +I+ G+ + + + G + GA S
Sbjct: 285 DTKTVAIGRGKQVQNFTTNVVHYGKHSDGQILKHGVMKEEATSIFNGITKIEHGATKSNG 344
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ KI +FY + RGI + A L
Sbjct: 345 EQTERVLMLSEKARGDANPILLIDEDDVTAGHAASVGKIDPLQMFYLMSRGISKREAERL 404
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
I++GF+ V+ +LP+E E +LI++ +E V
Sbjct: 405 IIHGFLAPVVNELPIESVKE--QLIEV-IERKV 434
>gi|138896582|ref|YP_001127035.1| ABC transporter associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196249284|ref|ZP_03147982.1| FeS assembly protein SufD [Geobacillus sp. G11MC16]
gi|134268095|gb|ABO68290.1| ABC transporter associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196211041|gb|EDY05802.1| FeS assembly protein SufD [Geobacillus sp. G11MC16]
Length = 437
Score = 323 bits (827), Expect = 5e-86, Method: Composition-based stats.
Identities = 108/453 (23%), Positives = 191/453 (42%), Gaps = 28/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+E IR S+++ EPDW+ E RL A + + P + + +F D + +
Sbjct: 10 DETYIRTFSSERGEPDWLTERRLEALGKAEQLPLPKPDKTKIDKWNFTDFGRHVVDSAP- 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
Y L + L + + + +ELK+ G
Sbjct: 69 ---------------YANLDDLPEAVKALIEAGEGTTNLYVQRNHTPAYVSLSDELKEKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DL+KKY T V ++ AAL++A+ G FVY+PK V L
Sbjct: 114 VIFTDIFTAAREHGDLLKKYFMTDAVKPDEHRLAALHAALLNGGVFVYVPKNVEIETPLQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ +E G F +++A++ S V ++E + + + V E+ A NA + ++
Sbjct: 174 AVYIQDEDDIGLFNHVIVVAEDNSRVVFVENYLSASDEGKAVVNIVAEVFANANARVFFA 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + G + +V +RG G +I W T L G+ S G
Sbjct: 234 AVDHLAKG-------VTTYVNRRGVA-GRDGRIEWALGLMNDGNTVSENITRLIGDGSFG 285
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ +S G Q + T ++H K+T I+ G+ + + + G + GA+ S
Sbjct: 286 DTKTVVVSRGEQVQNFTTSVVHYGKHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNA 345
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP A L
Sbjct: 346 EQESRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPRNEAERL 405
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
I++GF+ V++ +P+E ++LI++ +E V
Sbjct: 406 IIHGFLAPVVEAIPLEGVK--KQLIEV-IERKV 435
>gi|218459550|ref|ZP_03499641.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
Kim 5]
Length = 288
Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 226/273 (82%), Positives = 250/273 (91%)
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
F + GQFERTLIIA+EG+YVSYLEGCTAPQRDENQLHAAVVELVALD+AEIKYST
Sbjct: 16 IFASTRRVPGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYST 75
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
VQNWYPGD +GKGGIYNFVTKRGDCRG RSKISWTQ+ETGSAITWKYPSC+LRG+ S GE
Sbjct: 76 VQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCILRGDDSRGE 135
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
FYSIA+SNG QQIDSGTKM+HL KNT+SRIVSKGI+AG SNNTYRG+VS HR A+++RNF
Sbjct: 136 FYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNF 195
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
TQCDSLLIG+ CGAHT+PYIE+KNS+ EHEATTSKIS++ LFYCLQRGIP EAAIALI
Sbjct: 196 TQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALI 255
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
VNGFV+EVLQ+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 256 VNGFVKEVLQELPMEFAVEAQKLISISLEGSVG 288
>gi|89100666|ref|ZP_01173523.1| YurX [Bacillus sp. NRRL B-14911]
gi|89084612|gb|EAR63756.1| YurX [Bacillus sp. NRRL B-14911]
Length = 436
Score = 320 bits (821), Expect = 3e-85, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 191/453 (42%), Gaps = 28/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S + EP W+ E R+ A T+ P + + +F +
Sbjct: 10 DKEYISSFSKEMGEPAWLTELRVKALADAETLPMPRPDKTKIDKWNFTQFEKHIVES--- 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L E + L + + ++ + +EL+ G
Sbjct: 67 -------------EDFGSLDNLPEEAKSLIDLDKESKNLYIQRNNRPTHLSLSKELQDQG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A E+ DL++KY V V ++ AL++A+ G+F+Y+P+ V +
Sbjct: 114 VIFADIFTAAREYGDLLQKYFMKDGVKVDEHRLTALHAALLNGGAFLYVPRNVEVSEPIQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ ++K F LI+ ++ S V+Y+E + + V E++A N+ ++Y
Sbjct: 174 AIYLHDDKEANVFNHVLIVTEDNSSVTYVETYLSTIDSAEGVFNIVTEVLAGTNSRVQYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
TV N G I +V +RG S+I W T L G+ S G
Sbjct: 234 TVDNLAKG-------ITTYVNRRGRA-ERDSRIEWALGLMNDGNTISENVTNLIGDGSVG 285
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q+ + T ++H KNT I+ G+ +++ + G + GA S
Sbjct: 286 DTKTVVVGRGEQKQNFTTSVVHFGKNTEGYILKHGVMKESASSIFNGIGKIEHGATKSNA 345
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 346 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPTQLYYLMSRGIPQTEAERL 405
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+++LP+E ++L+D+ +E V
Sbjct: 406 VIHGFLAPVVKELPIEGVK--KQLVDV-IERKV 435
>gi|308068313|ref|YP_003869918.1| ABC transporter permease [Paenibacillus polymyxa E681]
gi|305857592|gb|ADM69380.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Paenibacillus polymyxa E681]
Length = 434
Score = 319 bits (817), Expect = 7e-85, Method: Composition-based stats.
Identities = 102/449 (22%), Positives = 196/449 (43%), Gaps = 27/449 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + +R +S + EP W+ E R A ++ P + + + +D Y + I
Sbjct: 10 DSEQLRVLSERNGEPSWLAEDRQKALELAGKLELPVFEKTKIERWKLNDYGQYKQSEVIA 69
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ +L++ ++ G+ I+ +S +V EEL G
Sbjct: 70 SVGQVPAAVADLVKEQQEGGLIIQR------------------NSGAVYVKLSEELAAQG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A+ EH DLVK +L+TV+ +N +AL++A++ G F Y+PK V + L
Sbjct: 112 VIFTDLQTAVKEHADLVKAHLNTVIKAEENSLSALHAALWNGGVFAYVPKNVELNVPLQA 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
F ++ L+I + S V+Y++ + LH VE+VA A+++Y+T
Sbjct: 172 VFLTDDATATFAPHVLLIVESHSSVTYVDNYVSADLAAPVLHNGAVEVVANAGAKVRYAT 231
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V + + R G + I W E + T +L+G S +
Sbjct: 232 VHQFGEQVTDIS--------IRRATLGNDAAIEWIVGEMNNGNTASNTMSVLKGNGSNSD 283
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA+ +G Q+++ T+ H KN+ S+++++ + +++ G + +GA +
Sbjct: 284 AKIIAVGSGSQKLNYTTQAQHFGKNSASQMITRAVMREEASSIINGITKIEKGATKADGQ 343
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
L++ P + H A+ +++ E ++Y + RGI A LI
Sbjct: 344 QTERVLMLSPKARGDANPILLIDEDDVTAGHAASVGQVNREQVYYLMSRGISRAEAERLI 403
Query: 457 VNGFVREVLQKLPME-FAVEAQKLIDISL 484
+ GF+ V+ ++P+E + Q L++ L
Sbjct: 404 IYGFLAPVVSEIPLEGLQHQLQSLVERKL 432
>gi|23099834|ref|NP_693300.1| hypothetical protein OB2379 [Oceanobacillus iheyensis HTE831]
gi|22778065|dbj|BAC14335.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 436
Score = 319 bits (817), Expect = 8e-85, Method: Composition-based stats.
Identities = 100/449 (22%), Positives = 192/449 (42%), Gaps = 26/449 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N+D I S +NEP+WM + R A ++ P + + +F + + K
Sbjct: 10 NQDYINQFSEDRNEPEWMTKLRSSALGMVDSLDMPKPDKTKITNWNFTEFKH--EYKEEK 67
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ EL ++ P + + +T +++L G
Sbjct: 68 TISSLSELPEELKDYFDNENKPNN--------------LLIQRNQSVAYSTLQDDLASKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A+ ++ DLV+KY V V N AL++A+ G FVY+PK V+ L
Sbjct: 114 VIFTDIFTAMRDYSDLVEKYYMKDAVAVDQNKLTALHAALVNGGIFVYVPKNVQIEEPLQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F + F L++A+EGS V+Y+E + ++ + + E+ A DNA++ Y
Sbjct: 174 AVFWQEDADNALFNHVLVVAEEGSSVTYVENYLSHNDEQASVANIITEVFAHDNAQVAYG 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N+ G +V +RG ++I+W + T L G+ +
Sbjct: 234 AVDNFAAG-------TTTYVNRRGVGH-RDAQINWALGQMNDGNTVSENITYLLGDNATS 285
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E ++++ G Q + + + K T + I+ +G+ G ++ + + G S +
Sbjct: 286 EAKAVSVGRGKQTQNFTSSIRQYGKQTDAYILQRGVMKGAASTIFNAIGKIEHGGTKSNS 345
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ +FY + RG+ +E A L
Sbjct: 346 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQMFYLMSRGLKQEEAERL 405
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDIS 483
+++GF+ V+ ++P+E + ++I+
Sbjct: 406 VIHGFLAPVVSQIPIESVRKQLTQVIERK 434
>gi|261408752|ref|YP_003244993.1| FeS assembly protein SufD [Paenibacillus sp. Y412MC10]
gi|261285215|gb|ACX67186.1| FeS assembly protein SufD [Paenibacillus sp. Y412MC10]
Length = 434
Score = 318 bits (816), Expect = 9e-85, Method: Composition-based stats.
Identities = 100/449 (22%), Positives = 192/449 (42%), Gaps = 27/449 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N + ++ +S K EP W+ + RL A ++ P + R + ++ Y K
Sbjct: 10 NAEALKALSESKQEPAWLTDSRLAALELAGQLELPKLEKQRIERWN---IHSYGEYKESN 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SLD++ + + E + + + +S +V + EL G
Sbjct: 67 KLASLDELPEHVAKLVE---------------GSREGGLVIQRNSGTVYASLAPELAAKG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A+ EH DLVK YL + ++ AAL++AV+ G F+Y+PK V + L
Sbjct: 112 VIFTDLETAVKEHADLVKPYLHQALKSDEHAMAALHAAVWNGGVFLYVPKNVEIDVPLQA 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
++ L++A+ S ++Y++ + H VVE+ A + A+++Y++
Sbjct: 172 VMLTDDAEATFAPHVLVVAEANSQITYVDNYVSDSLAAAVTHNGVVEVFAKNGAKVRYAS 231
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V + VT R + I W E T +L+G S +
Sbjct: 232 VHQLAGEATD--------VTFRRAVLDNDASIEWIVGEMNDGDTASDTMSILKGNGSTSD 283
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA+ +G Q+I+ T+ H K++ S+++++ + + G + +GA +
Sbjct: 284 AKIIAVGSGSQKINYTTQAKHFGKSSASQMITRAVMREEAQAIINGITKIEKGATKADGQ 343
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
L++ P + H A+ +++ E ++Y + RGI A +LI
Sbjct: 344 QTERVLMLSPKARGDANPILLIDEDDVTAGHAASVGQVNREQIYYLMSRGISRSVAESLI 403
Query: 457 VNGFVREVLQKLPME-FAVEAQKLIDISL 484
+ GF+ V+ ++P+E + Q L++ L
Sbjct: 404 IYGFLAPVVSEIPLEGLRDQLQGLVERKL 432
>gi|149183561|ref|ZP_01861984.1| hypothetical protein BSG1_14183 [Bacillus sp. SG-1]
gi|148848728|gb|EDL62955.1| hypothetical protein BSG1_14183 [Bacillus sp. SG-1]
Length = 436
Score = 318 bits (816), Expect = 1e-84, Method: Composition-based stats.
Identities = 103/452 (22%), Positives = 194/452 (42%), Gaps = 28/452 (6%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
+D + S + EP+W + R+ A + ++ P + + +F + +
Sbjct: 11 KDYLDSFSKGQGEPEWFTDLRIQALTKAGELELPKPDKTKITKWNFTEFKQHTVES---- 66
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
+ Y+ L + L + +++ + ++ T +ELK GV
Sbjct: 67 ------------KPYQNLSELPEAAKALIDMDSTENNLYVQRNNTPAYLTLSQELKDKGV 114
Query: 158 IFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
IF I A+ EH DLV+KY V V ++ AL++A+ G+F+Y+PK V +
Sbjct: 115 IFTDILTAVKEHGDLVQKYFMQEGVKVDEHKLTALHAALVNGGAFLYVPKNVEVAQPIQA 174
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ + T F L++AD+ S V+Y+E + E ++ V E+ A +NA++ Y
Sbjct: 175 VYIQDNADTTLFNHVLVVADDNSSVTYVENYISTTDVEQGIYNIVTEVFANNNAKVTYGA 234
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V N G I +V +RG +I W T L G+ S +
Sbjct: 235 VDNLASG-------ITTYVNRRGTA-ARDGRIDWALGLMNDGDTISENVTNLMGDGSYAD 286
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
++ + G Q+ + TK++H KN+ I+ G+ +++ + G + GA+ S
Sbjct: 287 TKTVVVGRGKQKQNFTTKVVHFGKNSEGYILKHGVMKDEASSIFNGIGKIEHGASKSNAE 346
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ P + H A+ ++ L+Y + RGIP+ A L+
Sbjct: 347 QESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGIPQHEAERLV 406
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++GF+ V+ +LP+E +K + +E V
Sbjct: 407 IHGFLAPVVNQLPIEG---VKKQLTEVIERKV 435
>gi|299822010|ref|ZP_07053897.1| iron (Fe) ABC superfamily ATP binding cassette transporter,
membrane protein [Listeria grayi DSM 20601]
gi|299816638|gb|EFI83875.1| iron (Fe) ABC superfamily ATP binding cassette transporter,
membrane protein [Listeria grayi DSM 20601]
Length = 433
Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats.
Identities = 105/451 (23%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D IR S NEP W+L++R A+++ + P + + +F + A K +
Sbjct: 10 DFIRTFSENGNEPKWLLDFRTAAWQKVAELDLPYVDKTKINRWNFTKFDTFHAFKPGLTD 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ LD +L ++ + D + ELK+ GVI
Sbjct: 70 EELDSKVTGVLD-----------------LENKEANYYVQVDQHPARLQLQAELKEQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + AI HP+LVK YL T V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FEDLHSAIQNHPELVKSYLMTQAVQKDEHKLTAFHAALINGGVFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F + LIIAD+ S V+Y+E + V E++A NA I + V
Sbjct: 173 FVQKNIESPLINHNLIIADDNSSVTYVENYITLDEKTAGIVNIVEEVIANQNARITFGAV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + ++ +RG G S++ W T + L G S +
Sbjct: 233 DNLSSE-------VTTYINRRGHV-GADSRLEWALGLMNDGDTINENNTNLIGAGSSSDV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASIGTILSHGVMKDSATTVFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ + P + + H A+ ++ +FY + RGI + A LI+
Sbjct: 345 ESRVLMLSSKARGDANPILLIDENDVVAGHAASVGRVDPVQMFYLMSRGISRKEAERLII 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIEN---VKLMLRNVIEGKV 432
>gi|288554031|ref|YP_003425966.1| SufD-like protein [Bacillus pseudofirmus OF4]
gi|288545191|gb|ADC49074.1| SufD-like protein [Bacillus pseudofirmus OF4]
Length = 435
Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats.
Identities = 99/449 (22%), Positives = 190/449 (42%), Gaps = 27/449 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I+ S +NEP W+ + RL + T++ P + + +F Y
Sbjct: 10 DKEQIQAFSDGRNEPAWLKDIRLKGAELFDTLELPKPDKTKIDKWNFTAANY-------- 61
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ ++ + + L G + + A D +V +EL G
Sbjct: 62 --------NLAEVKAADNVAALAEGIRNLVGDEDKVDNLLAQQDGSTVYKKVSKELTDKG 113
Query: 157 VIFMPISEAICEHPDLVKKY-LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF ++ A+ +H DLVKKY V + +N AL++A+ G+F+Y+P+ V + L
Sbjct: 114 VIFTDLATAVEKHEDLVKKYLFGEAVQMDENRLTALHAALLNGGTFIYVPRNVDVEVPLQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ K G + +++A+E S V+Y+E + DE + V E+ A A++ +
Sbjct: 174 AVYAFGAKDAGLYNHVIVVAEENSSVTYVENYVSLSEDEA-VANIVAEVYAAQGAKVAFG 232
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N + +V +RG +++ W + T + L G+ S
Sbjct: 233 AVDNL-------SSNVTTYVVRRGHV-ERDARLEWALGQMNDGNTVSENTTHLVGDGSWA 284
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q+ + T++ H K++ I+ G+ + + G + GA S
Sbjct: 285 DTKTVTIGRGSQKQNFTTQIFHHGKHSEGYILKHGVMRDAATAIFNGITKIEHGATKSNG 344
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ +I +FY + RGIP + A L
Sbjct: 345 EQTERVLMLSEKARGDANPILLIDEDDVTAGHAASVGRIDPLQMFYLMSRGIPRKEAERL 404
Query: 456 IVNGFVREVLQKLPMEFAVE-AQKLIDIS 483
+++GF+ V+ +LP+E E ++ I+
Sbjct: 405 VIHGFLAPVVSQLPIESVKEQLREAIERK 433
>gi|87311561|ref|ZP_01093679.1| hypothetical protein DSM3645_24777 [Blastopirellula marina DSM
3645]
gi|87285683|gb|EAQ77599.1| hypothetical protein DSM3645_24777 [Blastopirellula marina DSM
3645]
Length = 441
Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats.
Identities = 113/440 (25%), Positives = 188/440 (42%), Gaps = 26/440 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N + + AK+ EP W+++ R A+ + PS + D+ + K
Sbjct: 15 NASALDELIAKRQEPAWLVDLRRAAFETFCEKAMPS---RKEEEWMRTDIRTFHLDKF-- 69
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
D+ EL IP L ++S +V + EELK G
Sbjct: 70 ------DLPAELTE------IPADLPSGLLTEGVDLGGRLVSYNSRTVSSELSEELKAQG 117
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF SE + HP++V+K+ + V + ++A+++A FT G +Y+P+GV L
Sbjct: 118 VIFGSFSEVLASHPEIVRKHFAHAVDPHFDKFSAMHAAFFTTGQVLYVPRGVVVKKPLHA 177
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ G TL+I DEG+ + L + LH +EL A ++Y
Sbjct: 178 LSLLGAGG-VDLGHTLVILDEGAEATMLNETASIDESAPGLHCGAIELFVHPRARLRYIN 236
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+QNW G+++F ++G + I WT GS ++ L G + E
Sbjct: 237 LQNWG-------HGVWHFAHQKGIV-ERDAHIQWTIGALGSKLSKVNQHVALAGVGAESE 288
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+ + G Q + T H A N S + K S +RG + V + A + +
Sbjct: 289 VNGVMFTEGRQHLSYHTLQHHEAPNCRSNFLYKTALQDRSRTVWRGMIKVDKDAQKTDGY 348
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ D+LL+ +C A +IP +E + H AT ++ +E +FY RG + AI I
Sbjct: 349 QRNDNLLLTEHCRADSIPGLEIEADDVRCTHGATIGRVDEEQIFYAQCRGFTRKEAIRAI 408
Query: 457 VNGFVREVLQKLPMEFAVEA 476
V GF ++V ++P+E EA
Sbjct: 409 VIGFFQQVFDRIPVESVREA 428
>gi|171780020|ref|ZP_02920924.1| hypothetical protein STRINF_01808 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281368|gb|EDT46803.1| hypothetical protein STRINF_01808 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 316
Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats.
Identities = 135/324 (41%), Positives = 205/324 (63%), Gaps = 8/324 (2%)
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ E+P+L K+Y +V ++ +AALN AV++ G+F+Y+PKGV+C + + TYFRIN +
Sbjct: 1 MQEYPELFKEYFGKIVSNSEHKFAALNGAVWSGGTFIYVPKGVQCDIPVQTYFRINGENA 60
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFER+LII DEG+ + Y+EGCTAP N LHAA VE++ +A +Y+T+QNW
Sbjct: 61 GQFERSLIIIDEGASIQYIEGCTAPNYTTNSLHAATVEIIVKRDASFRYTTMQNW----- 115
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
+YN VT+RG + W GS + KYP +L G + S+A +N
Sbjct: 116 --SDNVYNLVTERGKV-EENGMLEWIDGNLGSKVNMKYPCSILDGPHAKTSVLSMAFANY 172
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q +D+G K+ H A +T+S ++SK ++ YRG V + + S++ +CD++L+
Sbjct: 173 GQHLDAGCKVYHNAPHTSSTLISKSVAKDGGKTDYRGSVYFGKHSEGSKSHIECDTILMD 232
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+ + TIP+ E NS+ +L+HEA SK+S+E L+Y + RGI EE A A+IVNGF+ +
Sbjct: 233 DLSSSDTIPFNEIHNSNVSLKHEAKVSKVSEEQLYYMMSRGISEEEATAMIVNGFMEPIT 292
Query: 466 QKLPMEFAVEAQKLIDISLEGSVG 489
++LPME+AVE LI +S+EGSVG
Sbjct: 293 KELPMEYAVEMNSLITMSMEGSVG 316
>gi|323227192|gb|EGA11365.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
Length = 277
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 189/278 (67%), Positives = 231/278 (83%), Gaps = 1/278 (0%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
MELSTYFRIN + TGQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE
Sbjct: 1 MELSTYFRINAEKTGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAE 60
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+KYSTVQNW+PGD+ GGI NFVTKR C G SK+SWTQ ETGSAITWKYPSC+LRG+
Sbjct: 61 VKYSTVQNWFPGDNN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGD 119
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
S GEFYS+A+++G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A
Sbjct: 120 NSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTAT 179
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
++RNFTQCDS+LIG +CGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE
Sbjct: 180 NARNFTQCDSMLIGADCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEED 239
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 240 AISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 277
>gi|70727039|ref|YP_253953.1| hypothetical protein SH2038 [Staphylococcus haemolyticus JCSC1435]
gi|68447763|dbj|BAE05347.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 435
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 99/450 (22%), Positives = 191/450 (42%), Gaps = 27/450 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRQKALKLTETLEMPKPDKTKLRKWDFDSFKQHEV--KG 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+L ++ + + I + + L ++ T ++ +K+
Sbjct: 66 QSFSNLSELPEAIKK-----IIDVENTKNLV----------VQHNNALAYTQVSDQAQKN 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +SEA+ H +LV+KYL T V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEGLSEALINHGELVQKYLMTDAVSVDEHRLTALHTALINGGVFVYVPKNVVVEDPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++ F +I+ +E + V+Y+E + E V E++A N+ I Y
Sbjct: 171 QYVVLHDDDNASFFNHVIIVTEESAEVTYVENYLSTASGEGNQLNIVSEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGTTAADASINWALGLMNEGSQIIDNTTNLIGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SELKSVVVGTGDQKINLTSKIVQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI ++ A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAER 402
Query: 455 LIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + +++I++
Sbjct: 403 LVIHGFLDPVVRELPIEDVKRQLREVIELK 432
>gi|149175398|ref|ZP_01854019.1| hypothetical protein PM8797T_18079 [Planctomyces maris DSM 8797]
gi|148845666|gb|EDL60008.1| hypothetical protein PM8797T_18079 [Planctomyces maris DSM 8797]
Length = 445
Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats.
Identities = 115/458 (25%), Positives = 194/458 (42%), Gaps = 27/458 (5%)
Query: 29 VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYY 88
P G +E A ++EP W+ E R A++R+ + + Y +D L
Sbjct: 9 SADIPAGFSEAAFEAFLATRDEPAWVTESRRQAFKRYSELLETQLDPEEYRRVDLRAL-- 66
Query: 89 YAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTF 148
P L+ + + T ++EQ AG T D + +
Sbjct: 67 --RPDRFQLSSGLESAETQQASTL------LKEQAEFAGHVT-------HVDGQLISSEL 111
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKG 207
+EL GVIF ++ EH DLV+KY T V + ++A ++A +T G+F+Y+P+
Sbjct: 112 SDELTAKGVIFGDLASVAREHSDLVQKYFMTRAVDSNTDRFSAWHAAFWTGGTFLYVPRN 171
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
V L + + + F TL+I +EG+ + LE + D LH+ VEL+
Sbjct: 172 VVVDAPLHSLITLQAEKAADFSHTLVILEEGASATLLEETASTSEDNLGLHSGAVELILA 231
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
A ++Y +QNW +++ + G + WT G+ + + +
Sbjct: 232 KEARLRYVQLQNW-------NHKVWHIAHQAGRV-ENNGFLQWTVGGIGAKLAHIHQDVV 283
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L G + E + S Q TK H A T S ++ K + S +RG + V
Sbjct: 284 LDGRGAEAEVNGVTFSTDQQIHSFYTKQAHNAPETRSDLLYKQVLRDHSRAIWRGMIRVE 343
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
+ + + DSL++ C IP +E + H AT ++ +E +FYC+ RGI
Sbjct: 344 PEGQQTNGYQRNDSLMLSPTCRGDAIPGLEIEADDVRCTHGATAGRVDEEQIFYCMSRGI 403
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
E A+ +IV GF + V ++P+E E + I L
Sbjct: 404 SEYEAMHMIVEGFFQTVFDRIPVEVVRETLNQAIIKKL 441
>gi|251798587|ref|YP_003013318.1| FeS assembly protein SufD [Paenibacillus sp. JDR-2]
gi|247546213|gb|ACT03232.1| FeS assembly protein SufD [Paenibacillus sp. JDR-2]
Length = 435
Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 184/448 (41%), Gaps = 30/448 (6%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL 101
++ K EP W+++ R A T++ P ++R + + Y K++ L
Sbjct: 15 EALARSKGEPQWLVDLRGEAAELAGTLEWPKPEKMRIDRWNLTAVGAYEQGKAVGSVAEL 74
Query: 102 DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMP 161
+V EL V + +S +V+ EL GVI
Sbjct: 75 PEVVREL-------------------VAEGTENIVVQHNSSAVLKQLSAELAAKGVILTD 115
Query: 162 ISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
+ A EH DLVK YL V G+N A+++A++ G FVY+PK V + L N
Sbjct: 116 LETACKEHADLVKPYLFQAVSAGENKLTAMHAALWNGGVFVYVPKNVEVELPLQAVLFNN 175
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN--QLHAAVVELVALDNAEIKYSTVQN 279
+ LI+A+ S V+Y++ + + +H ++VE+ A +++ ++ +
Sbjct: 176 KPDAAFAPHILIVAESNSSVTYVDYVVSEPGSIDAPFVHHSIVEVFVKPGAHVRFGSIHH 235
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
+T R ++ W + T +L+G S +
Sbjct: 236 MADNGVD--------MTLRRAVIENDGQMEWVIGDLNDGYTVSDTVSVLKGNGSNSDAKV 287
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
I+I Q++ T+ H +++ S +V++ + + G + +GA +
Sbjct: 288 ISIGGSDQKMSLTTQATHFGRSSESNMVTRAVMRDNATAIINGITKIEKGATKANGVQTE 347
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
L++ P + H A+ +++ E ++Y + RGI ++ A LI+ G
Sbjct: 348 KVLMLSPKARGDANPILLIDEDDVKAGHAASVGQVNPEQVYYLMSRGISKQDAERLIIYG 407
Query: 460 FVREVLQKLPMEFAVE-AQKLIDISLEG 486
F+ V+ ++P++ E Q+L++ LEG
Sbjct: 408 FLAPVVSEIPIDAVREQLQRLLERKLEG 435
>gi|294501707|ref|YP_003565407.1| FeS assembly protein SufD [Bacillus megaterium QM B1551]
gi|294351644|gb|ADE71973.1| FeS assembly protein SufD [Bacillus megaterium QM B1551]
Length = 435
Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats.
Identities = 107/450 (23%), Positives = 187/450 (41%), Gaps = 29/450 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL-YYYAAPKSI 95
+++ I S + NEP W+L+ RL A + + P + +F + + +I
Sbjct: 10 DQEYISSFSKEANEPSWLLDLRLQALAKAEDLALPKPDKTNISKWNFTAFDKHTSQASTI 69
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
L +V L+ T + D + +T EELK
Sbjct: 70 SSVDELPEVVKALIDTEAVKNL------------------YVQRDQTAAYSTLTEELKSQ 111
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A EH DLV+KY V V ++ ALN+A+ G FVY+PK V L
Sbjct: 112 GVIFTDIQTAAKEHSDLVEKYFMKDGVKVDEHRLTALNAALLNGGVFVYVPKNVEVQEPL 171
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
F ++ F +++A++ S V+Y+E A + N + V E+ NA++ +
Sbjct: 172 QAVFVREDEEAALFNHVIVVAEDNSSVTYVENYIATAEESNGVVNIVTEVFTNSNAKVTF 231
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V G +V +RG G +I W T + L G+ S
Sbjct: 232 GAVDYLAKG-------TTTYVNRRGVA-GKDGRIEWALGLMSEGNTVSENTTYLMGDGSY 283
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
G+ ++ + G Q + T ++H K++ I+ G+ +++ + G + GA+ S
Sbjct: 284 GDTKTVTVGRGEQSQNLTTSIVHFGKHSEGYILKHGVMKESASSIFNGIGKIEHGASKSN 343
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ P + H A+ ++ L+Y + RGIP+ A
Sbjct: 344 AEQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPQTEAER 403
Query: 455 LIVNGFVREVLQKLPMEFA-VEAQKLIDIS 483
L+++GF+ V+ +LP+E + LI+
Sbjct: 404 LVIHGFLAPVVNELPIETVKKQLTDLIERK 433
>gi|304406757|ref|ZP_07388412.1| FeS assembly protein SufD [Paenibacillus curdlanolyticus YK9]
gi|304344290|gb|EFM10129.1| FeS assembly protein SufD [Paenibacillus curdlanolyticus YK9]
Length = 435
Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats.
Identities = 97/452 (21%), Positives = 193/452 (42%), Gaps = 30/452 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ +S K EP+W+ R A T++ P + R + Y K+
Sbjct: 10 SRQAAEALSRSKGEPEWLTAQRANAAELAETLELPKVEKTRIDRWNLSAFGQY---KAAQ 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L ++ ++ A ++ + S +V EELK G
Sbjct: 67 PVGQLTELPEDIQ----------------ALTAQAEAGLIVQRGSGAVYGKLSEELKAKG 110
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A EH +LV+ YL +VVP ++ AL+ A++ G FVY+PK V + L
Sbjct: 111 VIFTDLETAAREHSNLVQPYLHSVVPNNEDKLTALHGALWNGGVFVYVPKNVEVEVPLQA 170
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN--QLHAAVVELVALDNAEIKY 274
++ LI+A+ S V+Y++ + +H ++VE+VA A++ +
Sbjct: 171 VLFNDDAEAAFAPHILIVAETHSRVTYVDNVVTTGSAADASSVHHSIVEVVAKAGAQVNF 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+++ N GGI + +R +++ W + T +L G+ S
Sbjct: 231 ASIHN-------MSGGIVDLSIRR-AALDNDARVEWVIGDLNDGNTLSDTKSVLNGKGSS 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ I+I + Q++ T+ +H +++ S+++++ + + G + +GA +
Sbjct: 283 SDSKVISIGSNDQKMSLTTQAVHFGRSSDSQMITRAVMRDAATAIINGITKIEKGATKAN 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
L++ P + H A+ +++ E ++Y + RGI ++ A
Sbjct: 343 GEQTEKVLMLSPKSRGDANPILLIDEDDVTAGHAASVGQVNPEQVYYLMSRGIAKKDAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
LI+ GF+ V+ ++P++ E Q+L++ LE
Sbjct: 403 LIIYGFLAPVVSEIPIDAVREQLQRLLERKLE 434
>gi|46908585|ref|YP_014974.1| FeS assembly protein SufD [Listeria monocytogenes serotype 4b str.
F2365]
gi|46881857|gb|AAT05151.1| FeS assembly protein SufD [Listeria monocytogenes serotype 4b str.
F2365]
Length = 429
Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 6 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 65
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 66 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 108
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 109 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 168
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 169 FVQDKAESPLVNHVLLVADDNSSVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 228
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 229 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 280
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 281 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 340
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 341 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 400
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 401 HGFLDPVVRQLPIES---VKTMLREVIEGKV 428
>gi|224500142|ref|ZP_03668491.1| FeS assembly protein SufD [Listeria monocytogenes Finland 1988]
Length = 433
Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 187/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL + GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVEQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVNIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|226224962|ref|YP_002759069.1| aminotransferase [Listeria monocytogenes Clip81459]
gi|254991998|ref|ZP_05274188.1| aminotransferase [Listeria monocytogenes FSL J2-064]
gi|225877424|emb|CAS06138.1| Putative aminotransferase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
Length = 433
Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSSVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|254827989|ref|ZP_05232676.1| sufD [Listeria monocytogenes FSL N3-165]
gi|258600372|gb|EEW13697.1| sufD [Listeria monocytogenes FSL N3-165]
Length = 433
Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVNIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|295707054|ref|YP_003600129.1| FeS assembly protein SufD [Bacillus megaterium DSM 319]
gi|294804713|gb|ADF41779.1| FeS assembly protein SufD [Bacillus megaterium DSM 319]
Length = 435
Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats.
Identities = 105/449 (23%), Positives = 188/449 (41%), Gaps = 27/449 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S + NEP W+L+ RL A + + P + +F +A
Sbjct: 10 DQEYISSFSKEANEPSWLLDLRLQALAKAEDLALPKPDKTNISKWNFTAFDKHA--SQAS 67
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
S++++ + + + + D + +T EELK G
Sbjct: 68 TISSVEELPEVVKALIDTEAV---------------KNLYVQRDQTAAYSTLTEELKSQG 112
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DLV+KY V V ++ ALN+A+ G FVY+PK V L
Sbjct: 113 VIFTDIQTAAKEHSDLVEKYFMKDGVKVDEHRLTALNAALLNGGVFVYVPKNVEVQEPLQ 172
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ F +++A++ S V+Y+E A + N + V E+ A NA++ +
Sbjct: 173 AVFVREDEEAALFNHVIVVAEDNSSVTYVENYIATAEESNGVVNIVTEVFANSNAKVTFG 232
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V G +V +RG G +I W T + L G+ S G
Sbjct: 233 AVDYLAKG-------TTTYVNRRGVA-GKDGRIEWALGLMSEGNTVSENTTYLMGDGSYG 284
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T ++H K++ I+ G+ +++ + G + GA+ S
Sbjct: 285 DTKTVTVGRGEQSQNLTTSIVHFGKHSEGYILKHGVMKESASSIFNGIGKIEHGASKSNA 344
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 345 EQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPQTEAERL 404
Query: 456 IVNGFVREVLQKLPMEFA-VEAQKLIDIS 483
+++GF+ V+ +LP+E + LI+
Sbjct: 405 VIHGFLAPVVNELPIETVKKQLTDLIERK 433
>gi|315648869|ref|ZP_07901964.1| FeS assembly protein SufD [Paenibacillus vortex V453]
gi|315275837|gb|EFU39189.1| FeS assembly protein SufD [Paenibacillus vortex V453]
Length = 434
Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats.
Identities = 98/449 (21%), Positives = 188/449 (41%), Gaps = 27/449 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N + ++ +S K EP W+ + RL + ++ P + R + Y K
Sbjct: 10 NAEALKALSESKQEPTWLTDSRLASLELAGQLELPKLEKQRIERWNIQSYGEY---KESK 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SLDD+ ++ + E + + + +S +V + EL G
Sbjct: 67 KLASLDDLPEQVAKLVE---------------GSREGGLVIQRNSGTVHVSLAPELAAKG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A+ EH DLVK YL + ++ AAL++AV+ G F+Y+PK V + L
Sbjct: 112 VIFTDLETAVKEHADLVKPYLHQALKNDEHSMAALHAAVWNGGVFLYVPKNVEVDVPLQA 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
++ L++A+ S ++Y++ + H VE+ + A+++Y++
Sbjct: 172 VMLSDDAEATFAPHVLVVAEANSQITYVDNYVSDSLTAPVTHNGAVEVFVKNGAKVRYAS 231
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V VT R + I W E T +L+G S +
Sbjct: 232 VHQLTGE--------VTDVTFRRAVLENDASIEWIVGEMNDGDTASDTMSILKGNGSTSD 283
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA+ +G Q+I+ T+ H K++ S+++++ + + G + +GA +
Sbjct: 284 AKIIAVGSGSQKINYTTQAKHFGKSSESQMITRAVMREEAQAIINGITKIEKGATKADGQ 343
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
L++ P + H A+ +++ E ++Y + RGI A +LI
Sbjct: 344 QTERVLMLSPKARGDANPILLIDEDDVTAGHAASVGQVNREQVYYLMSRGISRTVAESLI 403
Query: 457 VNGFVREVLQKLPME-FAVEAQKLIDISL 484
+ GF+ V+ ++P+E + Q L++ L
Sbjct: 404 IYGFLAPVVSEIPLEGLRDQLQGLVERKL 432
>gi|258611894|ref|ZP_05242932.2| FeS assembly protein SufD [Listeria monocytogenes FSL R2-503]
gi|293597012|ref|ZP_05266520.2| FeS assembly protein SufD [Listeria monocytogenes HPB2262]
gi|300765258|ref|ZP_07075243.1| FeS assembly protein SufD [Listeria monocytogenes FSL N1-017]
gi|258606957|gb|EEW19565.1| FeS assembly protein SufD [Listeria monocytogenes FSL R2-503]
gi|293584719|gb|EFF96751.1| FeS assembly protein SufD [Listeria monocytogenes HPB2262]
gi|300514079|gb|EFK41141.1| FeS assembly protein SufD [Listeria monocytogenes FSL N1-017]
Length = 429
Score = 315 bits (808), Expect = 8e-84, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 6 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 65
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 66 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 108
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 109 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 168
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 169 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 228
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 229 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 280
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 281 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 340
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 341 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 400
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 401 HGFLDPVVRQLPIES---VKTMLREVIEGKV 428
>gi|293596317|ref|ZP_05230466.2| FeS assembly protein SufD [Listeria monocytogenes FSL J1-194]
gi|293594707|gb|EFG02468.1| FeS assembly protein SufD [Listeria monocytogenes FSL J1-194]
Length = 429
Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 6 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 65
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 66 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 108
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 109 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 168
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 169 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 228
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 229 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 280
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 281 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 340
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 341 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 400
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 401 HGFLDPVVRQLPIES---VKTMLREVIEGKV 428
>gi|310641149|ref|YP_003945907.1| fes assembly protein sufd [Paenibacillus polymyxa SC2]
gi|309246099|gb|ADO55666.1| FeS assembly protein SufD [Paenibacillus polymyxa SC2]
Length = 434
Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats.
Identities = 102/449 (22%), Positives = 198/449 (44%), Gaps = 27/449 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + +R +S + EP W+ E R A ++ P + + + + +D + + I
Sbjct: 10 DSEQLRVLSERNGEPTWLAEDRQKALELAGQLELPVFEKTKIERWNLNDYGQHKLSEVIT 69
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ +L++ ++ G+ I+ +S +V EEL G
Sbjct: 70 SVGQVPAAIADLVKEQQEGGLIIQR------------------NSGAVYVKLSEELAAQG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A+ EH DLVK +L+TV+ +N +AL++A++ G F Y+PK V + L
Sbjct: 112 VIFTDLQTAVKEHADLVKAHLNTVIKAEENSLSALHAALWNGGVFAYVPKNVELNVPLQA 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
F ++ L+IA+ S V+Y++ + LH VE+VA A+++Y+T
Sbjct: 172 VFLTDDATATFAPHVLLIAENHSSVTYVDNYVSADLAAPVLHNGAVEVVANAGAKVRYAT 231
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V + + R G + I W E + T +L+G S +
Sbjct: 232 VHQFGEQVTDIS--------IRRATLGNDAAIEWIVGEMNNGNTASNTMSVLKGNGSNSD 283
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA+ +G Q+++ T+ H KN+ S+++++ + +++ G + +GA +
Sbjct: 284 AKVIAVGSGSQKLNYTTQAQHFGKNSASQMITRAVMREEASSIINGITKIEKGATKADGQ 343
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
L++ P + H A+ +++ E ++Y + RGI A LI
Sbjct: 344 QTERVLMLSPQARGDANPILLIDEDDVTAGHAASVGQVNREQVYYLMSRGISRAEAERLI 403
Query: 457 VNGFVREVLQKLPME-FAVEAQKLIDISL 484
+ GF+ V+ ++P+E + Q L++ L
Sbjct: 404 IYGFLAPVVSEIPLEGLQHQLQSLVERKL 432
>gi|254831163|ref|ZP_05235818.1| FeS assembly protein SufD [Listeria monocytogenes 10403S]
Length = 433
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 187/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKNAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|328465278|gb|EGF36535.1| aminotransferase [Listeria monocytogenes 1816]
gi|332312843|gb|EGJ25938.1| FeS cluster assembly protein sufD [Listeria monocytogenes str.
Scott A]
Length = 433
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|116873777|ref|YP_850558.1| FeS assembly protein SufD [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742655|emb|CAK21779.1| FeS assembly protein SufD [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 433
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSSANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFLPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNKPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|16801571|ref|NP_471839.1| hypothetical protein lin2509 [Listeria innocua Clip11262]
gi|16415031|emb|CAC97736.1| lin2509 [Listeria innocua Clip11262]
Length = 433
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 106/451 (23%), Positives = 187/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY T V V +N A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMTDAVQVNENKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F + + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQEKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N G + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASG-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|205375191|ref|ZP_03227982.1| iron ABC transporter membrane protein [Bacillus coahuilensis m4-4]
Length = 435
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 193/451 (42%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ + S E W+ R A+ + L + P + + +F +A ++
Sbjct: 12 EYVNTFSTNSGEAAWLTTLRKEAFEKALDLPMPKPDKTKIDNWNFTSFEQHAVESTV--- 68
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ L E + L + +K V ++ + E+L GVI
Sbjct: 69 -------------FSSLNELPEEVKALVNTEDTK-NVYIQRNNTPAYVSLSEDLASKGVI 114
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A H +LV +Y V V ++ AL++A+ G+F+Y+PK V +
Sbjct: 115 FTDILTAAKNHSELVAQYFMKDCVKVDEHKLTALHAALMNGGAFLYVPKNVIIEEPIQAI 174
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+ ++ + T F L++A++ S V+Y+E + EN + + E++A +NA++ Y V
Sbjct: 175 YLLDNEKTTLFNHVLVVAEDNSSVTYVENYISTTEVENGVANIITEVIAGNNAKVAYGAV 234
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
G +V +RG G +KI W T L G+ S G+
Sbjct: 235 DTLAKGY-------TTYVNRRGIA-GRDAKIEWALGLMNDGNTVSENVTNLMGDGSFGDT 286
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q+ + TK++H KN+ I+ G+ +++ + G + GA+ S
Sbjct: 287 KTVVVGRGNQKQNFTTKVVHFGKNSEGYILKHGVMKDEASSIFNGIGKIEHGASKSNAEQ 346
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + H A+ ++ L+Y + RGI + A L++
Sbjct: 347 ESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGISQTEAERLVI 406
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E ++L+++ +E V
Sbjct: 407 HGFLAPVVKELPIEGVK--KQLVEV-IERKV 434
>gi|255519988|ref|ZP_05387225.1| aminotransferase [Listeria monocytogenes FSL J1-175]
Length = 433
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|289435675|ref|YP_003465547.1| FeS assembly protein SufD [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171919|emb|CBH28465.1| FeS assembly protein SufD [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 433
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 107/451 (23%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRSAFKAYGELDLPYVDKTKITRWNFTKFQTFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + D +EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKDANFYVQMDERPARLQLNQELIDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY T V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIITAVKNHPELVKKYFMTDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSSVTYVENYVTVNNVPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N G +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASGA-------TAYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K +T I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASTGTILSHGVMKESATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V++KLP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRKLPIES---VKTMLREVIEGKV 432
>gi|332969523|gb|EGK08542.1| FeS assembly protein SufD [Desmospora sp. 8437]
Length = 434
Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats.
Identities = 98/454 (21%), Positives = 179/454 (39%), Gaps = 31/454 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + I +S + EPDWML+ RL A+ + + P + R +F D + +
Sbjct: 11 DRETIIQLSQSQQEPDWMLQRRLSAWEQVDQLPLPKPEKTRIDRWNFTDFQPIQKEEGLA 70
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
P+ +P + ++G +T + + +S V EL G
Sbjct: 71 SPEE----------------LPEELRSYISGDETDNLFIQK--NSSPVYCRLPGELSAKG 112
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
V+F + A+ H +LV+KY T V ++ AL++A + G F+Y+PK V +
Sbjct: 113 VLFTDLPTAVRNHGELVRKYFMTDGVKPDEHKLTALHAAWVSGGLFLYVPKDVAVEIPFQ 172
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F G G F L++A+ GS V+ + + E + VVE+ A DN+ ++ +
Sbjct: 173 ALFWTQGSGIGTFPHLLVVAEAGSDVNVVANFISDSDTEAVI-NGVVEVFAGDNSRVRIA 231
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ G ++ R G + + W + S T + + G
Sbjct: 232 SLHTHGQGVTE--------ANYRRTVVGRDADLEWIVGDLNSGKTLSDNTTQMNGSGGNA 283
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
I + G ++ + + H +T S I +G+ + G + +GA +
Sbjct: 284 RIKGITVGAGDERSNITATVNHWGTHTESDITVRGVMKDQAQTILNGITKIEKGARKANG 343
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + + H A+ +I +FY + RG+ A L
Sbjct: 344 VQAEKVLMLSGEARGDANPILLIDENDVQAGHAASVGRIDPIQMFYLMSRGLTRREAERL 403
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ GFV VL +P E E I +E +G
Sbjct: 404 LIFGFVGPVLDTIPFESLRER---ISSVIERKLG 434
>gi|217963486|ref|YP_002349164.1| FeS assembly protein SufD [Listeria monocytogenes HCC23]
gi|217332756|gb|ACK38550.1| FeS assembly protein SufD [Listeria monocytogenes HCC23]
gi|307571940|emb|CAR85119.1| FeS assembly protein [Listeria monocytogenes L99]
Length = 433
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLIGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|290893710|ref|ZP_06556691.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556783|gb|EFD90316.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 433
Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMNDAVQVNEHKLTAFHTALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|313636476|gb|EFS02221.1| FeS assembly protein SufD [Listeria seeligeri FSL S4-171]
Length = 433
Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats.
Identities = 107/451 (23%), Positives = 186/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRSAFKAYGELDLPYVDKTKIARWNFTKFQTFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + D +EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKDANFYVQMDERPARLQLNQELIDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY T V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIITAVKNHPELVKKYFMTDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSSVTYVENYVTVNNVPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N G +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASGA-------TAYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K +T I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASTGTILSHGVMKESATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V++KLP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRKLPIES---VKTMLREVIEGKV 432
>gi|284802852|ref|YP_003414717.1| hypothetical protein LM5578_2609 [Listeria monocytogenes 08-5578]
gi|284995993|ref|YP_003417761.1| hypothetical protein LM5923_2558 [Listeria monocytogenes 08-5923]
gi|284058414|gb|ADB69355.1| hypothetical protein LM5578_2609 [Listeria monocytogenes 08-5578]
gi|284061460|gb|ADB72399.1| hypothetical protein LM5923_2558 [Listeria monocytogenes 08-5923]
Length = 433
Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats.
Identities = 102/451 (22%), Positives = 187/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKK+ V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKHFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASE-------VTAYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|16804452|ref|NP_465937.1| hypothetical protein lmo2414 [Listeria monocytogenes EGD-e]
gi|224503439|ref|ZP_03671746.1| hypothetical protein LmonFR_13167 [Listeria monocytogenes FSL
R2-561]
gi|16411902|emb|CAD00492.1| lmo2414 [Listeria monocytogenes EGD-e]
Length = 433
Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 187/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASE-------VTAYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|47095894|ref|ZP_00233498.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|254900448|ref|ZP_05260372.1| hypothetical protein LmonJ_11557 [Listeria monocytogenes J0161]
gi|254913314|ref|ZP_05263326.1| FeS assembly protein SufD [Listeria monocytogenes J2818]
gi|254937694|ref|ZP_05269391.1| sufD [Listeria monocytogenes F6900]
gi|47015771|gb|EAL06700.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258610297|gb|EEW22905.1| sufD [Listeria monocytogenes F6900]
gi|293591317|gb|EFF99651.1| FeS assembly protein SufD [Listeria monocytogenes J2818]
Length = 433
Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats.
Identities = 104/451 (23%), Positives = 188/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW LE R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLEIRRNAFKTYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL + GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVEQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKSPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASE-------VTAYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|1171584|emb|CAA64569.1| sufB [Plasmodium falciparum]
Length = 470
Score = 312 bits (800), Expect = 6e-83, Method: Composition-based stats.
Identities = 189/468 (40%), Positives = 278/468 (59%), Gaps = 15/468 (3%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY ++ I + +GLN ++I+ +S+ ++ ++ + + K P W
Sbjct: 14 NYKYQYKNKINLYLIRQGLNINLIKNLSSNIFLYMFIYNFKKYSLKLLNIFKLPDWNFFD 73
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY+ + L Y K + I E L + ++D
Sbjct: 74 CPNINYDNIIYYS-----------SILKDNNLIYYLKNNLNI---EFLDSILIKNNSIDI 119
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+S++ T + LKK G+IF+P+ + I ++P L+KKYL T++ DNF+A +NS +F+
Sbjct: 120 IFDSMSILHTTQYFLKKLGIIFLPLFDIIFKYPLLIKKYLGTIISYKDNFFANINSIIFS 179
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
+GSF YIPK V+C LSTYF+ N QFERTLII + SYVSYLEGCTA E+QL
Sbjct: 180 EGSFCYIPKYVKCNFNLSTYFKTNSSDFAQFERTLIIVGKYSYVSYLEGCTASLYKESQL 239
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H A+VE++ D IKY T+QNWY GD G GG+YNF TKRG C SK+ W Q+E GS
Sbjct: 240 HVAIVEIIVKDYGYIKYYTLQNWYRGDYLGNGGLYNFTTKRGICLN-YSKLDWIQVEVGS 298
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
ITWKYPS +L+G+ S FYSI+ + Q D+G+KM H+ T S I+SK IS S
Sbjct: 299 IITWKYPSTILKGKFSISNFYSISFISNMQIADTGSKMYHIGSYTKSYIISKSISLNNSL 358
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
N +RG V + + S N+T+C SL+ GNN TIPYI++ N++ ++ EA SKI
Sbjct: 359 NIFRGLVYIKPFSYKSYNYTECSSLIFGNNSLTVTIPYIKNYNNTSYVKQEAFVSKIEII 418
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
+LF +QRG+ +I+L++ GF ++ KLP EF +E L + ++
Sbjct: 419 YLFLLMQRGLSISESISLLIIGFCSDIYNKLPFEFNLEIPILFSLKIK 466
>gi|116334934|ref|YP_802429.1| putative ABC transporter permease component [Candidatus Carsonella
ruddii PV]
gi|116235215|dbj|BAF35063.1| putative ABC transporter permease component [Candidatus Carsonella
ruddii PV]
Length = 449
Score = 312 bits (800), Expect = 7e-83, Method: Composition-based stats.
Identities = 190/468 (40%), Positives = 284/468 (60%), Gaps = 23/468 (4%)
Query: 21 YGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPA 80
Y + + I + E++I IS EP+W+ +R+ ++ + P W
Sbjct: 4 YNYYSIINSYQIENKYCENLINEISYINTEPNWLKSFRINSFNIIKKINIPKWGNFFLKK 63
Query: 81 IDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
I +Y + L +T+++ + +A D V++
Sbjct: 64 IILSKSCFYNFHDNNNNYS--------LKKTFKQ-------------IINKNIATDFVYN 102
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
S+S+ TT K++L K G++F I+EAI + +L++KYL ++V DNF++ LNS++F+DG+
Sbjct: 103 SISIKTTMKKKLLKHGIVFCSINEAIKNYSELLRKYLGSIVKPQDNFFSCLNSSIFSDGT 162
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
FV+IPK CP+ELS+YFRIN++ GQFERTLII D+ S +SYLEGCTA + + QLH+A
Sbjct: 163 FVFIPKNTICPIELSSYFRINDE-IGQFERTLIICDDNSQLSYLEGCTASIKKKQQLHSA 221
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
VVEL+A N+ IKYST+QNWY G+ GIYNFVTKRG C G S I W Q+E+GS+IT
Sbjct: 222 VVELIAKKNSTIKYSTIQNWYVGNKFNYNGIYNFVTKRGLCFGNNSLILWIQIESGSSIT 281
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
WKYPSC+L+G S EFYSI+I+N +QQ+D+GTKM+HL S + +K I+ +S TY
Sbjct: 282 WKYPSCILKGNFSNSEFYSISITNNYQQVDTGTKMIHLGNKNYSIVNAKSIALDYSFQTY 341
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG + + A +S+N+T CDS+LIG +T P N C +EHEA+ S+IS + +
Sbjct: 342 RGIIKILNNANYSKNYTSCDSILIG-MSKIYTFPLNIVNNKFCKIEHEASVSQISFDEIN 400
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GI ++ +++N F E+ +KLP+EF E + LI ++ SV
Sbjct: 401 LLKSKGIKKKDCYNILINNFCYEIFKKLPLEFNNEIENLISSIIKYSV 448
>gi|239636562|ref|ZP_04677564.1| FeS assembly protein SufD [Staphylococcus warneri L37603]
gi|239597917|gb|EEQ80412.1| FeS assembly protein SufD [Staphylococcus warneri L37603]
Length = 435
Score = 312 bits (800), Expect = 7e-83, Method: Composition-based stats.
Identities = 103/450 (22%), Positives = 191/450 (42%), Gaps = 27/450 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH--HTEG 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
QSL+++ + + I + E L + +A T E+ K
Sbjct: 66 SVYQSLEELPESVKK-----IIDVENTENLVIQHNNDLA----------YTQVSEQAKND 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +SEA+ H DLV+KY T V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEGLSEALVNHSDLVQKYYMTDAVNVDEHRLTALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ T + +I+ ++ + V+Y+E + E V E++A N+ I Y
Sbjct: 171 QYVVLHDDENTSFYNHVIIVTEQSAEVTYVENYLSNASGEGNQINIVSEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGTTEADASINWALGLMNEGSQIIDNTTNLMGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SELKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRREAER 402
Query: 455 LIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + +++I++
Sbjct: 403 LVIHGFLDPVVRELPIEDVKRQLREVIELK 432
>gi|27467525|ref|NP_764162.1| hypothetical protein SE0607 [Staphylococcus epidermidis ATCC 12228]
gi|57866418|ref|YP_188089.1| FeS assembly protein SufD [Staphylococcus epidermidis RP62A]
gi|251810284|ref|ZP_04824757.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|282875593|ref|ZP_06284464.1| FeS assembly protein SufD [Staphylococcus epidermidis SK135]
gi|27315068|gb|AAO04204.1|AE016745_303 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637076|gb|AAW53864.1| FeS assembly protein SufD [Staphylococcus epidermidis RP62A]
gi|251806166|gb|EES58823.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|281295620|gb|EFA88143.1| FeS assembly protein SufD [Staphylococcus epidermidis SK135]
Length = 435
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 97/454 (21%), Positives = 184/454 (40%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD + +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQH--HTTG 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
L D+ + I + E L ++ T ++ K
Sbjct: 66 DAYTQLTDLPKSVKE-----IIDVENSENLI----------IQHNNELAYTQVSDQAKHD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +SEA+ H DLV+KY V V ++ AL++A+ G FVY+PK +
Sbjct: 111 GVIIEGLSEALVNHSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E+ V E++A N+ + Y
Sbjct: 171 QYVVLHDDEQASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + RG S
Sbjct: 283 SALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKRGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+ + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPI---DDVKRQLREVIERKV 433
>gi|310643920|ref|YP_003948678.1| iron abc transporter membrane protein [Paenibacillus polymyxa SC2]
gi|309248870|gb|ADO58437.1| iron ABC transporter membrane protein [Paenibacillus polymyxa SC2]
Length = 435
Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats.
Identities = 101/452 (22%), Positives = 189/452 (41%), Gaps = 27/452 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N D +R S+ K+EP W++E R+ A T++ P +I D + Y A +
Sbjct: 10 NVDDLRAWSSAKDEPRWLIERRVHALELAGTLELPKVEKINLEKWDIYESGDYKAENAWS 69
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ +V L+ + K G+ ++ F+S V T E L G
Sbjct: 70 SLEEAPEVVRGLVASPVKGGLIVQ------------------FNSDVVYTKLSESLAAQG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VI + A EH +LV++YL V ++ +A +SA+++ G F+Y+P GV +
Sbjct: 112 VILTDLHTAANEHEELVQRYLFQAVKPEEHRLSAAHSALWSGGVFLYVPDGVEVEAPIQA 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
F + G LI+A S ++Y++ C + + D LH +V E+ A ++++ ++
Sbjct: 172 IFINDTSGVCFAPHVLIVAGSNSKITYVDNCVSSRDDVKVLHNSVTEVFAGAGSKVQVAS 231
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V T+R + W E + T LL+G + +
Sbjct: 232 VHQLAA--------TTTDFTQRRAVVLADGGVEWIIGEMNNGYTASDTKTLLQGNGAVSD 283
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IAI G Q+ T+ H +++ S+++++ + + G + +GA H
Sbjct: 284 NKVIAIGTGNQKSSYTTQAQHFGRSSVSQMITRAVMLEEATAIINGITKIEKGATHCDGQ 343
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
L++ P + H A+ +++ E +Y + RGI A L+
Sbjct: 344 QTERVLMLSPKARGDANPILLIDEDDVTAGHAASVGQVNAEQFYYLMSRGISRSEAEHLV 403
Query: 457 VNGFVREVLQKLPMEFAV-EAQKLIDISLEGS 487
+ GF+ V+ ++P+E + L++ L S
Sbjct: 404 IFGFLAPVISEIPLEGVRSRLKDLVESKLGRS 435
>gi|293368291|ref|ZP_06614919.1| FeS assembly protein SufD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291317538|gb|EFE57956.1| FeS assembly protein SufD [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329726780|gb|EGG63240.1| FeS assembly protein SufD [Staphylococcus epidermidis VCU144]
gi|329736737|gb|EGG73002.1| FeS assembly protein SufD [Staphylococcus epidermidis VCU028]
gi|329737590|gb|EGG73836.1| FeS assembly protein SufD [Staphylococcus epidermidis VCU045]
Length = 435
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 96/454 (21%), Positives = 183/454 (40%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD + +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQH--HTTG 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
L D+ + I + E L ++ T ++ K
Sbjct: 66 DAYTQLTDLPKSVKE-----IIDVENSENLI----------IQHNNELAYTQVSDQAKHD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +SEA+ H DLV+KY V V ++ AL++A+ G FVY+PK +
Sbjct: 111 GVIIEGLSEALVNHSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E+ V E++A N+ + Y
Sbjct: 171 QYVVLHDDEQASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+ + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPI---DDVKRQLREVIERKV 433
>gi|167462632|ref|ZP_02327721.1| hypothetical protein Plarl_08745 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381722|ref|ZP_08055679.1| SufD-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321154312|gb|EFX46631.1| SufD-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 431
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 91/454 (20%), Positives = 190/454 (41%), Gaps = 32/454 (7%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++ + + +S EP+W+ R A T++ P ++ + Y KSI
Sbjct: 9 IDRNSVLEMSRSNQEPEWVTSLRTEALELAGTLEWPKLEKMNITRWNLSSFGTYTTEKSI 68
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ L +L S V +S V+ EEL
Sbjct: 69 TSIEQLPASVKDLA---------------------SVDNVLVQRNSGMVLNQLSEELAAK 107
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GVIF + A+ +H +L+K YL V ++ AAL++A ++ G+F+Y+PK V + L
Sbjct: 108 GVIFTDLQTALSKHEELIKPYLFQAVKKEEHKVAALHAASWSGGAFLYVPKNVNLDVPLQ 167
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ LI+A+ S V+Y+E + Q ++ + +VE+ + A++ +
Sbjct: 168 ALFLSDDAKASFSPHVLIVAEPNSSVTYVENLVSEQAKDSLVQTGIVEVFVKEGAKVNVA 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ + +T R +I+W + + + +L+G S
Sbjct: 228 SIHSLGKHVID--------LTYRRAVLENDGQINWIVGDLNHGDSVSDTTSILKGNGSNS 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ I + G Q+++ T+ +H ++ S ++++ + ++ G + +GA +
Sbjct: 280 DTKIICVGTGDQKLNLTTRAVHFGLDSNSDMITRAVMRDEASAIINGITKIEKGATRANG 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ +++ E +FY + RGI E A L
Sbjct: 340 QQTEKVLMLSPKARGDANPILLIDEDDVKAGHAASVGQVNPEQVFYMMSRGISREEATRL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
I+ GF+ V+ ++P+ + ++ + + +E +G
Sbjct: 400 IIYGFLAPVVSEIPI---TKIEEQLSLLVERKLG 430
>gi|297583456|ref|YP_003699236.1| FeS assembly protein SufD [Bacillus selenitireducens MLS10]
gi|297141913|gb|ADH98670.1| FeS assembly protein SufD [Bacillus selenitireducens MLS10]
Length = 435
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 111/454 (24%), Positives = 188/454 (41%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
+N++ + S + +P W + RL A + L++ P + +F+
Sbjct: 9 INKEDVTRFSTDRQDPKWFADLRLSALEQALSLDLPKPDKTNITKWNFNGFST------- 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ E Y L L GV+ + + + T ++LK
Sbjct: 62 -------ETGVEAANKYTALSEAE---RTLTGVEADVSNIVVQKNGQNRFTALTDDLKDK 111
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EH DLVKKY V V ++ AL++A G F+YIPK V L
Sbjct: 112 GVIFTDIQTALSEHSDLVKKYFMQDAVNVNEHRLTALHAAALNGGIFIYIPKNVEVKEPL 171
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ F G F LI+A+ S ++Y+E + EN + E+ D AE+++
Sbjct: 172 QSVFTH-AGDFGLFNHVLIVAEANSQLTYVENYLSEGSKENAFVNIIAEIYVEDGAEVRF 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V N + +V +RG G +K+ W + T + L GE S
Sbjct: 231 GAVDNLSED-------VVTYVNRRGQVNGRDAKLYWALGQMNDGNTVSENTTYLVGEGSY 283
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
G+ ++AI G Q + T ++H KN+ +I+ G+ + + + G + GA +
Sbjct: 284 GDTKTVAIGRGSQVQNFTTNVVHFGKNSDGQILKHGVMKDAATSIFNGVSKIEHGATKAN 343
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
L++ P + H A+ KI +FY + RG+ + A
Sbjct: 344 GEQTERVLMLSEKARGDANPILLIDEDDVTAGHAASVGKIDPVQMFYLMSRGMSKIEAER 403
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
LI++GF+ V+ LP++ E +L D+ +E V
Sbjct: 404 LIIHGFLNPVVSALPIDSVKE--QLFDV-IERKV 434
>gi|319401806|gb|EFV90014.1| feS assembly protein SufD [Staphylococcus epidermidis FRI909]
Length = 435
Score = 310 bits (795), Expect = 3e-82, Method: Composition-based stats.
Identities = 98/455 (21%), Positives = 184/455 (40%), Gaps = 31/455 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKS 94
++E+ + S NEP WM E R A + T++ P + + DFD ++ S
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQHHTTGDS 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
L E++ + I+ LA T ++ K
Sbjct: 68 YHQLTDLPKSVKEIIDVENSENLIIQHNNDLA------------------YTQVSDQAKN 109
Query: 155 SGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
GVI +SEA+ H DLV+KY V V ++ AL++A+ G FVY+PK
Sbjct: 110 DGVIIEGLSEALVNHSDLVQKYFMTKAVNVDEHRLTALHTALVNGGIFVYVPKNTVVEHP 169
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ +++ T + +I+ +E + V+Y+E + E+ V E++A N+ +
Sbjct: 170 IQYVVLHDDEQTSFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVT 229
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +V G + R + I+W + L G++S
Sbjct: 230 YGSVDYLDKG--------FTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRS 281
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 282 TSALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKS 341
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 342 IANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAE 401
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+ + ++ + +E V
Sbjct: 402 RLVIHGFLDPVVRELPI---DDVKRQLREVIERKV 433
>gi|223042707|ref|ZP_03612755.1| FeS assembly protein SufD [Staphylococcus capitis SK14]
gi|222443561|gb|EEE49658.1| FeS assembly protein SufD [Staphylococcus capitis SK14]
Length = 435
Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats.
Identities = 97/454 (21%), Positives = 188/454 (41%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + +FD + S
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWNFDTFKQHETKGS- 66
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
YE L + + V+ S+ V ++ + ++ KK
Sbjct: 67 ---------------AYENLSELPESVKQIIDVENSENLVIQH-NNDLAYSQVSDQAKKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +SEA+ H +LV+KY V + ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEGLSEALVNHSELVQKYFMTKAVDIDEHRLTALHTALMNGGIFVYVPKNVVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++ + +++ +E + V+Y+E + E+ V E++A N+ + Y
Sbjct: 171 QYVVLHDDDNASFYNHVILVTEESAEVTYVENYLSNANGEDNQINIVSEVIAGANSNVTY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGTTEADASINWALGLMNEGSQIIDNTTNLIGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SELKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMTENASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRTEAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|57640665|ref|YP_183143.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus kodakarensis KOD1]
gi|57158989|dbj|BAD84919.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus kodakarensis KOD1]
Length = 446
Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats.
Identities = 124/456 (27%), Positives = 211/456 (46%), Gaps = 33/456 (7%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E+ I ++ + EP+WM + R A + A + P I + L ++ A + G
Sbjct: 15 ENQIEELARRNKEPEWMTKIRYKALEAFER------APHKDPVISEEQLLHFIAKPEVKG 68
Query: 98 P----QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+SLDD+ PE+ ++LGI EQ+ +AG+ D+ + F ++
Sbjct: 69 LPDHIESLDDLPPEMKALLDRLGISEVEQKYIAGLA-------VQTDTGVIYNQFLQDWA 121
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
K G+I +P EA+ ++PD+VK++ + ++ A ++AV+ G F+Y+ +G++ P
Sbjct: 122 KKGLIVLPTEEAVRKYPDIVKQHFLKLFRADESKLTAYHTAVWNGGIFLYVKEGLKVPFP 181
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
L +F I E Q +IIA+ + +EGCTAP ++ LH + E + A+ +
Sbjct: 182 LHLFFLIQESALAQAPHIIIIAERNTEFHLIEGCTAPILLKHSLHLDMTEAYFHEGAKAQ 241
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCR---GMRSKISWTQLETGSAITWKYPSCLLRG 330
+ +QNW +V R R G ++ T + GS +
Sbjct: 242 LTVLQNWPE-----------YVHTRPMTRAKVGRGARFINTTVTLGSGKSNIGDPHYWVE 290
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
E E I + +D G +M + SK + S RG + A
Sbjct: 291 EGGHVELNGIILGQKDFYVDLGGRMFLQGPGASGINASKAVIMDESTVVTRGI--IEADA 348
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
++ CD+LL+ + T P + S+ L HEA KI +E LFY + RG+ EE
Sbjct: 349 PKTKGHISCDALLMSDKAVMETYPGLISRVDDAELSHEAAIGKIREEELFYLMSRGLDEE 408
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
A LIV GF+ +L+ +PMEF VE +K+I++++ G
Sbjct: 409 KATQLIVKGFLDPMLKDIPMEFLVEIRKIIELAVSG 444
>gi|242242206|ref|ZP_04796651.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
gi|242234379|gb|EES36691.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
Length = 435
Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats.
Identities = 97/455 (21%), Positives = 183/455 (40%), Gaps = 31/455 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKS 94
++E+ + S NEP WM E R A + T++ P + + DFD ++ S
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQHHTTGDS 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
L E++ + I+ LA T ++ K
Sbjct: 68 YHQLTDLPKSVKEIIDVENSENLIIQHNNDLA------------------YTQVSDQAKN 109
Query: 155 SGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
GVI +SEA+ H DLV+KY V V ++ AL++A+ G FVY+PK
Sbjct: 110 DGVIIEGLSEALVNHSDLVQKYFMTKAVNVDEHRLTALHTALVNGGIFVYVPKNTVVEHP 169
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ +++ + +I+ +E + V+Y+E + E+ V E++A N+ +
Sbjct: 170 IQYVVLHDDEQASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVT 229
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +V G + R + I+W + L G++S
Sbjct: 230 YGSVDYLDKG--------FTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRS 281
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 282 TSALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKS 341
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 342 IANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAE 401
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+ + ++ + +E V
Sbjct: 402 RLVIHGFLDPVVRELPI---DDVKRQLREVIERKV 433
>gi|228474352|ref|ZP_04059087.1| FeS assembly protein SufD [Staphylococcus hominis SK119]
gi|228271711|gb|EEK13058.1| FeS assembly protein SufD [Staphylococcus hominis SK119]
Length = 435
Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats.
Identities = 97/451 (21%), Positives = 188/451 (41%), Gaps = 29/451 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKS 94
++E + S +NEP WM E R A + T++ P + + DFD ++ KS
Sbjct: 8 ISEAQLVDYSKAQNEPSWMTELRQKALKLTETLEMPKPDKTKLRKWDFDAFKQHHVESKS 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
L + ++ + I+ LA T E+
Sbjct: 68 YNDVSELPESVKNIIDIENSKNLIIQHNNDLA------------------FTQVSEQANH 109
Query: 155 SGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
+ VI +S+A+ +H +LV+KYL V V ++ AL++A+ G FVY+PK V
Sbjct: 110 NNVIIEGLSKALQDHSELVEKYLMKDAVTVDEHRLTALHTALLNGGVFVYVPKNVVVEDP 169
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ + + F +I+ +E + V+Y+E + E + E++A N+ I
Sbjct: 170 IQYVVLHDNENASLFNHAIIVTEESAEVTYVENYLSTASGEGNQVNIISEVIAGANSNIT 229
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +V G + R + I+W + L G++S
Sbjct: 230 YGSVDYLDKG--------FTGHIIRRGVTAADASINWALGLMNEGSQIIDNTTNLIGDRS 281
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 282 TSELKSVIVGTGDQKINLTSKIVQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKS 341
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ + P + H A+ ++ E L+Y + RGI ++ A
Sbjct: 342 IANQESRVLMLSEHARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAE 401
Query: 454 ALIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + +++I++
Sbjct: 402 RLVIHGFLDPVVRELPIEDVKRQLREVIELK 432
>gi|323465017|gb|ADX77170.1| FeS assembly protein SufD [Staphylococcus pseudintermedius ED99]
Length = 435
Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats.
Identities = 100/455 (21%), Positives = 190/455 (41%), Gaps = 29/455 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E + S NEP WM E R A ++ +++ P + + DFD + ++
Sbjct: 8 ISEAQLVDYSQAHNEPSWMTELRKKALQQVESLEMPKPDKTKLTKWDFDSFKQHETEGAV 67
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
Y L +E + + V+ ++ V ++ T E+ ++
Sbjct: 68 ----------------YYDLKELPKEIDRIINVENTENLVIQH-NNTLAYTKVNEKAQQD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI I EA+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEHIQEALVNHSDLVEKYFMKDAVTVDEHRLTALHTALMNGGIFVYVPKNVVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++ F L++ +E + V+Y+E + E + E+VA N+ I Y
Sbjct: 171 QYVVLHDDDNASFFNHVLLVTEESAEVTYVENYLSTASGEGNQLNIISEVVAGANSNISY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I W+ + L G++S
Sbjct: 231 GSVDFLDQG--------FTGHIIRRGVTAADASIRWSLGLMNEGDQIIDNTTNLIGDRSS 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q I+ ++++ K T I+ G+ +++ + G + G + S
Sbjct: 283 SELKSVVVGRGKQTINLTSRIVQYGKETDGYILKHGVMKENASSIFNGIGHIKHGGSGSS 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI + +
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQSESER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
L+++GF+ V+++LP+E + Q+ + +E VG
Sbjct: 403 LVIHGFLDPVVRELPIE---DVQRQLREVIELKVG 434
>gi|47092995|ref|ZP_00230775.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47018649|gb|EAL09402.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
Length = 433
Score = 308 bits (790), Expect = 9e-82, Method: Composition-based stats.
Identities = 102/451 (22%), Positives = 185/451 (41%), Gaps = 29/451 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLSFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ L++ P + + H A+ ++ LFY + RGI ++ A L++
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVI 404
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+GF+ V+++LP+E + ++ +EG V
Sbjct: 405 HGFLDPVVRQLPIES---VKTMLREVIEGKV 432
>gi|314936861|ref|ZP_07844208.1| FeS assembly protein SufD [Staphylococcus hominis subsp. hominis
C80]
gi|313655480|gb|EFS19225.1| FeS assembly protein SufD [Staphylococcus hominis subsp. hominis
C80]
Length = 435
Score = 308 bits (790), Expect = 9e-82, Method: Composition-based stats.
Identities = 97/451 (21%), Positives = 188/451 (41%), Gaps = 29/451 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKS 94
++E + S +NEP WM E R A + T++ P + + DFD ++ KS
Sbjct: 8 ISEAQLVDYSKAQNEPSWMTELRQKALKLTETLEMPKPDKTKLRKWDFDAFKQHHVESKS 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
L + ++ + I+ LA T E+
Sbjct: 68 YNDVSELPESVKNIIDIENSKNLIIQHNNDLA------------------FTQVSEQANH 109
Query: 155 SGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
+ VI +S+A+ +H +LV+KYL V V ++ AL++A+ G FVY+PK V
Sbjct: 110 NNVIIEGLSKALQDHSELVEKYLMKDAVTVDEHRLTALHTALLNGGVFVYVPKNVVVEDP 169
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ + + F +I+ +E + V+Y+E + E + E++A N+ I
Sbjct: 170 IQYVVLHDNENASLFNHAIIVTEESAEVTYVENYLSTASGEGNQVNIISEVIAGANSNIT 229
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +V G + R + I+W + L G++S
Sbjct: 230 YGSVDYLDKG--------FTGHIIRRGVTAADALINWALGLMNEGSQIIDNTTNLIGDRS 281
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 282 TSELKSVIVGTGDQKINLTSKIVQYGKETNGYILKHGVMRENASSVFNGIGYIKHGGTKS 341
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ + P + H A+ ++ E L+Y + RGI ++ A
Sbjct: 342 IANQESRVLMLSEHARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQKEAE 401
Query: 454 ALIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + +++I++
Sbjct: 402 RLVIHGFLDPVVRELPIEDVKRQLREVIELK 432
>gi|319891827|ref|YP_004148702.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
pseudintermedius HKU10-03]
gi|317161523|gb|ADV05066.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
pseudintermedius HKU10-03]
Length = 435
Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats.
Identities = 100/455 (21%), Positives = 190/455 (41%), Gaps = 29/455 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E + S NEP WM E R A ++ +++ P + + DFD + ++
Sbjct: 8 ISEAQLVDYSQAHNEPSWMTELRKKALQQVESLEMPKPDKTKLTKWDFDSFKQHETEGAV 67
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
Y L +E + + V+ ++ V ++ T E+ ++
Sbjct: 68 ----------------YYDLKELPKEIDRIINVENTENLVIQH-NNTLAYTKVNEKAQQD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI I EA+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEHIQEALVNHSDLVEKYFMKDAVTVDEHRLTALHTALMNGGIFVYVPKNVVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++ F L++ +E + V+Y+E + E + E+VA N+ I Y
Sbjct: 171 QYVVLHDDDNASFFNHVLLVTEESAEVTYVENYLSTASGEGNQLNIISEVVAGANSNISY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I W+ + L G++S
Sbjct: 231 GSVDFLDQG--------FTGHIIRRGVTAADASIRWSLGLMNEGDQIIDNTTNLIGDRSS 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q I+ ++++ K T I+ G+ +++ + G + G + S
Sbjct: 283 SELKSVVVGRGTQTINLTSRIVQYGKETDGYILKHGVMKENASSIFNGIGHIKHGGSGSS 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI + +
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQSESER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
L+++GF+ V+++LP+E + Q+ + +E VG
Sbjct: 403 LVIHGFLDPVVRELPIE---DVQRQLREVIELKVG 434
>gi|14591188|ref|NP_143264.1| hypothetical protein PH1385 [Pyrococcus horikoshii OT3]
gi|6686191|sp|O50093|Y1385_PYRHO RecName: Full=UPF0051 protein PH1385
gi|3257808|dbj|BAA30491.1| 446aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 446
Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats.
Identities = 124/453 (27%), Positives = 204/453 (45%), Gaps = 27/453 (5%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV- 96
E+ I ++ + EP+WM + R A ++ P ID + L + A I
Sbjct: 15 ENQIEELAKRNKEPEWMTKIRYKALEEFMKAPL------NDPVIDEETLLNFIAKPEIEG 68
Query: 97 ---GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+SLDD+ PE+ ++LGI EQ+ +AG+ D+ + F +E
Sbjct: 69 IPEKVESLDDLPPEMKDLLDRLGINEVEQKYIAGLA-------VQTDTGVIYNQFLQEWA 121
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
K G+I +P EA+ +PD++K++ + G++ A + A++ G F+Y+ + ++ P
Sbjct: 122 KKGLIVLPTEEAVRRYPDIMKEHFLKLFKAGESKLTAYHIAIWNGGIFLYVKENLKVPFP 181
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
L +F I E Q IIA++ S V +EGCTAP + LH + E +NA+++
Sbjct: 182 LHLFFLIQESSLAQAPHITIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYLHENAKVR 241
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+ +QNW ++ R I+ T P GE
Sbjct: 242 LTVLQNWPEY-------VHTRPMTRAKVGRNAEFINTTVSLGAGKSNIANPK-YWVGENG 293
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E + + ID G +M + SK + S RG + A +
Sbjct: 294 YVELNGVILGQKDWYIDLGGEMHLQGEGGRGINASKSVIMDESTVITRG--KIVAEAKKT 351
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ CD+LL+ + T P + S L HEA KI +E LFY + RG+ EE A
Sbjct: 352 KGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIKEEELFYLMSRGLSEEKAT 411
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
LIV GFV +L+ +P+EF VE +K+I++++ G
Sbjct: 412 QLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSG 444
>gi|257876353|ref|ZP_05656006.1| FeS assembly protein SufD [Enterococcus casseliflavus EC20]
gi|257810519|gb|EEV39339.1| FeS assembly protein SufD [Enterococcus casseliflavus EC20]
Length = 446
Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats.
Identities = 106/450 (23%), Positives = 179/450 (39%), Gaps = 18/450 (4%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ + SA K EP+WMLE R A + + P R+RY ++ A
Sbjct: 9 EQVNVFSALKEEPEWMLELRQAALAKVDELAFPKIERVRYERWPLFNIDEQALAGEKEFA 68
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+D P G+ + A FD ++ +EL GVI
Sbjct: 69 GFIDPTLPASESKETGAGL------VPAFDAMDNHPTLVQFDDTTIFEQLPQELIDKGVI 122
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E P+LV +Y VP+ ++ A ++A G F+Y+PK V L
Sbjct: 123 FTDLFTAMKEVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGMFLYVPKNVVIEEPLEAI 182
Query: 218 FRINEKGTGQF-ERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F N F + LI+ADE S SYLE +L VVE++A A++K+S
Sbjct: 183 FYHNGNSQAHFFKHILIVADEHSEFSYLERFQTKGDQAKKLSGNIVVEVIAKAGAKVKFS 242
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ I ++ +RG + + W L GE +
Sbjct: 243 AIDQLGV-------NITTYMNRRGYVL-RDAMVDWAIGVMNDGDVVADFDSDLVGEGAHS 294
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E ++AIS G Q T++ + A ++ I+ G+ T+ G + +GA +
Sbjct: 295 EVKAVAISAGRQTQGIDTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADA 354
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + H A+ ++ E ++Y + RG+ + A L
Sbjct: 355 QQESRVLMLSDQARGDANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKAEAERL 414
Query: 456 IVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
++ GF+ VL +P+ E E +I+ L
Sbjct: 415 VIRGFLGSVLTAIPVKEVQQELVAVIEGKL 444
>gi|169826149|ref|YP_001696307.1| hypothetical protein Bsph_0552 [Lysinibacillus sphaericus C3-41]
gi|168990637|gb|ACA38177.1| UPF0051 protein [Lysinibacillus sphaericus C3-41]
Length = 435
Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats.
Identities = 97/449 (21%), Positives = 175/449 (38%), Gaps = 29/449 (6%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
+R S EP W E R A + + P R DF + +
Sbjct: 14 VRSFSEANGEPTWFTELRAAALDKVTGLDLPKPDRTNITKWDFMNFPAFTVHS------- 66
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ L E + L ++ + + ++ +EL GV+F
Sbjct: 67 ---------EAFPSLDALPEEAKGLIDLEAQE-NLYIQRNNTPAYIKISQELVDKGVVFT 116
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ EH +LV+KY T V V ++ AL++A+ G FVY+PK V L F
Sbjct: 117 DIFTAVREHGELVQKYFMTEAVKVDEHKLTALHTALVNGGVFVYVPKNVVIEQPLQVVFL 176
Query: 220 INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
+ + L++A+ S V+Y+E + + E+V DNA++ Y V
Sbjct: 177 NDNAEASLYNHVLVVAEANSAVTYVETYVSTVEQAKGQANIIAEVVVQDNAQVTYGAVDV 236
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
G +V +R +K+ W + T L G+ S + +
Sbjct: 237 LAKG-------FTTYVNRR-ARLARDAKVDWALGLMNDSDTISENITHLIGDGSHADTKT 288
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+ + G Q+++ T++ H KN+ I+ G+ + + + G + GA + +
Sbjct: 289 VVVGRGEQKLNFTTEVRHWGKNSNGHILKHGVMKDAAQSIFNGIGYIEHGATKADAQQES 348
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
L++ P + H A+ ++ L+Y + RGI + A L+++G
Sbjct: 349 RVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGISKAEAERLVIHG 408
Query: 460 FVREVLQKLPMEFAVEAQKLIDISLEGSV 488
F+ V+ +LP+E QK + +E V
Sbjct: 409 FLAPVVTQLPIEG---VQKQLTEVIERKV 434
>gi|242373061|ref|ZP_04818635.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
gi|242349215|gb|EES40816.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W1]
Length = 435
Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats.
Identities = 99/454 (21%), Positives = 185/454 (40%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E + S NEP WM E R A T++ P + + +FD +
Sbjct: 8 ISEAQLVDYSKAHNEPSWMTELRKKALELTETLEMPKPDKTKLRKWNFDTFKQHE--TKG 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+LD++ + + I + E L + +A T + K
Sbjct: 66 SAYNNLDELPESVKQ-----IIDVENTENLVIQHNNDLA----------YTQVSNQAKND 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +SEA+ H DLV+KY T V + ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEGLSEALVNHSDLVQKYFMTEAVDIDEHRLTALHTALLNGGVFVYVPKNVVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E V E++A N+ + Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQINIVSEVIAGANSNVAY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGTTEADASIKWALGLMNEGSQIIDNTTNLVGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SELKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRTEAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|126652014|ref|ZP_01724203.1| hypothetical protein BB14905_11225 [Bacillus sp. B14905]
gi|126591104|gb|EAZ85214.1| hypothetical protein BB14905_11225 [Bacillus sp. B14905]
Length = 435
Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats.
Identities = 99/449 (22%), Positives = 175/449 (38%), Gaps = 29/449 (6%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
+R S EP W E R A + + P R DF + +
Sbjct: 14 VRSFSEANGEPTWFTELRAAALDKVTGLDLPKPDRTNITKWDFMNFPAFTVHS------- 66
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
Y L E + L ++ + ++ +EL GVIF
Sbjct: 67 ---------EAYPSLDALPEEAKGLIDLEAQG-NLYIQRNNTPAYIKTSQELADKGVIFT 116
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ EH +LV+KY T V V ++ AL++A+ G FVY+PK V L F
Sbjct: 117 DIFTAVREHGELVQKYFMTEAVKVDEHKLTALHTALVNGGVFVYVPKNVVIEQPLQVVFL 176
Query: 220 INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
+ + L++A+ S V+Y+E + + + E+V DNA++ Y V
Sbjct: 177 NDNADASLYNHVLVVAEANSAVTYVETYISTVEEAKGQANIIAEVVVQDNAQVTYGAVDV 236
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
G +V +R +K+ W + T L G+ S + +
Sbjct: 237 LAKG-------FTTYVNRR-ARLARDAKVDWALGLMNDSDTISENITHLIGDGSHADTKT 288
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+ + G Q+++ T++ H KN+ I+ G+ + + + G + GA + +
Sbjct: 289 VVVGRGEQKLNFTTEVRHWGKNSNGHILKHGVMKDAAQSIFNGIGYIEHGATKADAQQES 348
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
L++ P + H A+ ++ L+Y + RGI + A L+++G
Sbjct: 349 RVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGISKAEAERLVIHG 408
Query: 460 FVREVLQKLPMEFAVEAQKLIDISLEGSV 488
F+ V+ +LP+E QK + +E V
Sbjct: 409 FLAPVVTQLPIEG---VQKQLTEVIERKV 434
>gi|314933128|ref|ZP_07840493.1| FeS assembly protein SufD [Staphylococcus caprae C87]
gi|313653278|gb|EFS17035.1| FeS assembly protein SufD [Staphylococcus caprae C87]
Length = 435
Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats.
Identities = 96/454 (21%), Positives = 186/454 (40%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + +FD + S
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWNFDTFKQHETKGS- 66
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
YE L + + V+ S+ V ++ + E+ K
Sbjct: 67 ---------------AYENLNELPESVKQIIDVENSENLVIQH-NNDLAYSQVSEQAKND 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI + EA+ H +LV+KY T V + ++ AL++A+ G FVY+PK + +
Sbjct: 111 GVIIEGLHEALVNHSELVQKYYMTQAVDIDEHRLTALHTALMNGGIFVYVPKNIVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++ + +++ +E + V+Y+E + E+ V E++A N+ + Y
Sbjct: 171 QYVVLHDDDNASFYNHVILVTEESAEVTYVENYLSNANGEDNQINIVSEVIAGANSNVTY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGTTEADASIKWALGLMNEGSQIIDNTTNLIGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SELKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRTEAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|14520971|ref|NP_126446.1| hypothetical protein PAB1856 [Pyrococcus abyssi GE5]
gi|5458188|emb|CAB49677.1| Hypothetical protein, UPF0051 family [Pyrococcus abyssi GE5]
Length = 446
Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats.
Identities = 121/449 (26%), Positives = 203/449 (45%), Gaps = 19/449 (4%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E+ I ++ + EP+WM + R A ++ ++F +
Sbjct: 15 ENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF--IAKPEIEGIPDK 72
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
+SLDD+ PE+ ++LGI EQ+ +AG+ D+ + F +E K G+
Sbjct: 73 IESLDDLPPEMKALLDRLGISEVEQKYIAGLA-------VQTDTGVIYNQFLQEWAKKGL 125
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I +P EAI ++PD++K++ + G+N A ++AV+ G F+Y+ + ++ P L +
Sbjct: 126 IVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLF 185
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F I E Q +IIA++ S V +EGCTAP + LH + E D A+++ + +
Sbjct: 186 FLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVL 245
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
QNW ++ R ++ T P E E
Sbjct: 246 QNWPEY-------VHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPK-YWVEEGGHVEL 297
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
+ + ID G +M K + SK + S+ RG + A ++
Sbjct: 298 NGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHI 355
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
CD+LL+ + T P + S L HEA KI +E LFY + RG+ EE A LIV
Sbjct: 356 SCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIV 415
Query: 458 NGFVREVLQKLPMEFAVEAQKLIDISLEG 486
GFV +L+ +P+EF VE +K+I++++ G
Sbjct: 416 KGFVEPMLKDIPIEFVVEIKKIIELAVSG 444
>gi|329930471|ref|ZP_08284011.1| FeS assembly protein SufD [Paenibacillus sp. HGF5]
gi|328934849|gb|EGG31339.1| FeS assembly protein SufD [Paenibacillus sp. HGF5]
Length = 434
Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats.
Identities = 98/449 (21%), Positives = 190/449 (42%), Gaps = 27/449 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N + ++ +S + EP W+ + RL + ++ P + R + ++ Y K
Sbjct: 10 NAEALKALSESRQEPTWLTDSRLASLELAGQLELPKLEKQRIERWN---IHSYGEYKESK 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SLD++ + E + + + +S +V T+ EL G
Sbjct: 67 KLASLDELPERAAQLVE---------------GSREGGLVIQRNSGTVYTSLASELAAKG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A+ +H DLVK YL + ++ AAL++AV+ G F+Y+PK V + L
Sbjct: 112 VIFTDLETAVRKHEDLVKPYLHQALKNDEHALAALHAAVWNGGVFLYVPKNVEVDVPLQA 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
++ LI+A+ S ++Y++ + H VE+ A + A+++Y++
Sbjct: 172 VMLTDDAEATFAPHVLIVAEANSQITYVDNYVSDSLAAPVTHNGAVEIFAKNGAKVRYAS 231
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V VT R + I W E T +L+G S +
Sbjct: 232 VHQLTVE--------TTDVTFRRAVLDNDASIEWIVGEMNDGDTASDTMSILKGNGSTSD 283
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA+ +G Q+I+ T+ H K++ S+++++ + + G + +GA +
Sbjct: 284 AKVIAVGSGSQKINYTTQAKHYGKSSASQMITRAVMREEAQAIINGITKIEKGATKADGQ 343
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
L++ P + H A+ +++ E ++Y + RGI A +LI
Sbjct: 344 QTERVLMLSPKARGDANPILLIDEDDVTAGHAASVGQVNREQIYYLMSRGISRSVAESLI 403
Query: 457 VNGFVREVLQKLPME-FAVEAQKLIDISL 484
+ GF+ V+ ++P+E + Q L++ L
Sbjct: 404 IYGFLAPVVSEIPLEGLRDQLQGLVERKL 432
>gi|82750525|ref|YP_416266.1| hypothetical protein SAB0775 [Staphylococcus aureus RF122]
gi|82656056|emb|CAI80463.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 435
Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 191/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVKGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|323488653|ref|ZP_08093895.1| hypothetical protein GPDM_04894 [Planococcus donghaensis MPA1U2]
gi|323397671|gb|EGA90475.1| hypothetical protein GPDM_04894 [Planococcus donghaensis MPA1U2]
Length = 434
Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats.
Identities = 109/453 (24%), Positives = 193/453 (42%), Gaps = 30/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
E +R S EP W E RL ++ ++ P + + + +F D +A
Sbjct: 10 TEQDVRSFSEMNGEPSWFTELRLRSFGEAQSLPLPKPDKTKILSWNFTDFPVHAV--ESE 67
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+SL+D+ ++ I EQ+ L ++ + E+L G
Sbjct: 68 KFESLEDLTEDVKA------IVDLEQKNL----------YIQHNNTPAFSRISEDLAAQG 111
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VI I A+ EH DLVKKY T V ++ ALN+A+ G+F+Y+PK V +
Sbjct: 112 VILTDIFTALREHGDLVKKYFMTNGVKTDEHKLTALNAALMNGGAFLYVPKNVVVEEPVQ 171
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ F +++AD S V+Y+E + N L V E+ A DNA+I Y
Sbjct: 172 VVFYHDDAEASLFNHVIVVADTSSKVTYVENYYSTVPHANGLANIVSEVFAEDNAQITYG 231
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V G +V +RG ++I W + T + L G+ S G
Sbjct: 232 AVDTLAEG-------FITYVNRRGIA-ARDARIEWALGMMNDSDTISENTTHLIGDNSFG 283
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ S+ + G Q+ + T+++H K++ I+ G+ +++ + G + GA S
Sbjct: 284 DTKSVVVGRGSQKQNFTTQVVHWGKDSEGFILKHGVMKDSASSIFNGIGKIEHGATRSNA 343
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGI ++ A L
Sbjct: 344 VQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGITKQEAERL 403
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V++ LP+E +K + +E V
Sbjct: 404 VIHGFLAPVVRVLPIEG---VKKQLTEVIERKV 433
>gi|49483075|ref|YP_040299.1| hypothetical protein SAR0877 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|57651605|ref|YP_185786.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus COL]
gi|87161300|ref|YP_493519.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194606|ref|YP_499402.1| hypothetical protein SAOUHSC_00848 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151220998|ref|YP_001331820.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509112|ref|YP_001574771.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141906|ref|ZP_03566399.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253731452|ref|ZP_04865617.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732732|ref|ZP_04866897.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257424962|ref|ZP_05601389.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427630|ref|ZP_05604029.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430264|ref|ZP_05606647.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
68-397]
gi|257432962|ref|ZP_05609322.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
E1410]
gi|257435866|ref|ZP_05611914.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M876]
gi|258423467|ref|ZP_05686358.1| FeS assembly protein SufD [Staphylococcus aureus A9635]
gi|258452133|ref|ZP_05700149.1| FeS assembly protein SufD [Staphylococcus aureus A5948]
gi|262052916|ref|ZP_06025097.1| hypothetical protein SA930_0128 [Staphylococcus aureus 930918-3]
gi|282905230|ref|ZP_06313087.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908210|ref|ZP_06316041.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910491|ref|ZP_06318295.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913686|ref|ZP_06321475.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M899]
gi|282922193|ref|ZP_06329888.1| FeS assembly protein SufD [Staphylococcus aureus A9765]
gi|282923602|ref|ZP_06331282.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C101]
gi|283769981|ref|ZP_06342873.1| Fe-S cluster assembly protein SufD [Staphylococcus aureus subsp.
aureus H19]
gi|283957652|ref|ZP_06375105.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023842|ref|ZP_06378240.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus 132]
gi|293500729|ref|ZP_06666580.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
58-424]
gi|293509679|ref|ZP_06668390.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M809]
gi|293524266|ref|ZP_06670953.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M1015]
gi|294850188|ref|ZP_06790924.1| FeS assembly protein SufD [Staphylococcus aureus A9754]
gi|295427398|ref|ZP_06820033.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590244|ref|ZP_06948883.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|49241204|emb|CAG39883.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|57285791|gb|AAW37885.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus COL]
gi|87127274|gb|ABD21788.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202164|gb|ABD29974.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373798|dbj|BAF67058.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160367921|gb|ABX28892.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253724695|gb|EES93424.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729343|gb|EES98072.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272532|gb|EEV04655.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275823|gb|EEV07296.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279041|gb|EEV09652.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
68-397]
gi|257282377|gb|EEV12512.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
E1410]
gi|257285057|gb|EEV15176.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M876]
gi|257846528|gb|EEV70551.1| FeS assembly protein SufD [Staphylococcus aureus A9635]
gi|257860348|gb|EEV83180.1| FeS assembly protein SufD [Staphylococcus aureus A5948]
gi|259159167|gb|EEW44230.1| hypothetical protein SA930_0128 [Staphylococcus aureus 930918-3]
gi|269940417|emb|CBI48794.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314470|gb|EFB44860.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C101]
gi|282322718|gb|EFB53040.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M899]
gi|282325883|gb|EFB56191.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327875|gb|EFB58157.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331637|gb|EFB61149.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282593483|gb|EFB98477.1| FeS assembly protein SufD [Staphylococcus aureus A9765]
gi|283460128|gb|EFC07218.1| Fe-S cluster assembly protein SufD [Staphylococcus aureus subsp.
aureus H19]
gi|283470114|emb|CAQ49325.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
ST398]
gi|283791103|gb|EFC29918.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921229|gb|EFD98290.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M1015]
gi|291095734|gb|EFE25995.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
58-424]
gi|291467776|gb|EFF10291.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
M809]
gi|294822962|gb|EFG39395.1| FeS assembly protein SufD [Staphylococcus aureus A9754]
gi|295128786|gb|EFG58417.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297576543|gb|EFH95258.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus MN8]
gi|302750742|gb|ADL64919.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|312438724|gb|ADQ77795.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
TCH60]
gi|315194443|gb|EFU24835.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|315197263|gb|EFU27601.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141269|gb|EFW33116.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143041|gb|EFW34832.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323442001|gb|EGA99638.1| FeS assembly protein SufD [Staphylococcus aureus O46]
gi|329313582|gb|AEB87995.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
T0131]
gi|329726245|gb|EGG62715.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
21189]
gi|329733979|gb|EGG70301.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
21193]
Length = 435
Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 191/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|262049610|ref|ZP_06022478.1| hypothetical protein SAD30_1193 [Staphylococcus aureus D30]
gi|259162252|gb|EEW46826.1| hypothetical protein SAD30_1193 [Staphylococcus aureus D30]
Length = 435
Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 191/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVDHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|257870755|ref|ZP_05650408.1| FeS assembly protein SufD [Enterococcus gallinarum EG2]
gi|257804919|gb|EEV33741.1| FeS assembly protein SufD [Enterococcus gallinarum EG2]
Length = 439
Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats.
Identities = 106/450 (23%), Positives = 177/450 (39%), Gaps = 25/450 (5%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D + SA K EP+WMLE R A + + P R+RY ++ A
Sbjct: 9 DQVNVFSALKEEPEWMLELRQAALAKVDELPFPKIERVRYERWPLFNINEAALVGEQEFS 68
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+D L + + FD +V + L GVI
Sbjct: 69 GVIDPAAAGL-------------GAVPSFDAMDSHPTVVQFDETTVFEQLPQHLVDQGVI 115
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E P+LV +Y VP+ ++ A ++A G F+Y+PK V L
Sbjct: 116 FTDLFTAMREVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGLFLYVPKNVIIEEPLEAI 175
Query: 218 FRINEKGTGQF-ERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F N F + LI+ADE S SYLE +L VVE++A A++K+S
Sbjct: 176 FYHNGNSQAHFFKHVLIVADEHSEFSYLERFQTKGDQAKKLSGNIVVEVIAKAGAKVKFS 235
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ I ++ +RG + + W L GE +
Sbjct: 236 AIDQLGV-------NITTYMNRRGYVL-RDAMVDWAIGVMNDGDVIADFDSDLVGEGAHS 287
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E ++AIS G Q T++ + A ++ I+ G+ T+ G + +GA +
Sbjct: 288 EVKAVAISAGRQTQGIDTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADA 347
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 348 QQESRVLMLSDQARGDANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERL 407
Query: 456 IVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
++ GF+ VL +P+ E E +I+ L
Sbjct: 408 VIRGFLGSVLTAIPVKEVQQELVAVIEGKL 437
>gi|21282525|ref|NP_645613.1| hypothetical protein MW0796 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485690|ref|YP_042911.1| hypothetical protein SAS0785 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208451|ref|ZP_06924881.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300912527|ref|ZP_07129970.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
gi|21203962|dbj|BAB94661.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244133|emb|CAG42559.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296887190|gb|EFH26093.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300886773|gb|EFK81975.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus TCH70]
Length = 435
Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats.
Identities = 96/454 (21%), Positives = 191/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ I G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVIGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|15923833|ref|NP_371367.1| ABC transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|15926503|ref|NP_374036.1| hypothetical protein SA0775 [Staphylococcus aureus subsp. aureus
N315]
gi|148267278|ref|YP_001246221.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH9]
gi|150393328|ref|YP_001316003.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH1]
gi|156979170|ref|YP_001441429.1| hypothetical protein SAHV_0839 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253316873|ref|ZP_04840086.1| hypothetical protein SauraC_12154 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005631|ref|ZP_05144232.2| hypothetical protein SauraM_04150 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794860|ref|ZP_05643839.1| FeS assembly protein SufD [Staphylococcus aureus A9781]
gi|258418176|ref|ZP_05682441.1| FeS assembly protein SufD [Staphylococcus aureus A9763]
gi|258421473|ref|ZP_05684398.1| FeS assembly protein SufD [Staphylococcus aureus A9719]
gi|258439185|ref|ZP_05690229.1| FeS assembly protein SufD [Staphylococcus aureus A9299]
gi|258440887|ref|ZP_05690722.1| FeS assembly protein SufD [Staphylococcus aureus A8115]
gi|258445717|ref|ZP_05693894.1| FeS assembly protein SufD [Staphylococcus aureus A6300]
gi|258448952|ref|ZP_05697061.1| FeS assembly protein SufD [Staphylococcus aureus A6224]
gi|258453930|ref|ZP_05701902.1| FeS assembly protein SufD [Staphylococcus aureus A5937]
gi|269202468|ref|YP_003281737.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
ED98]
gi|282894653|ref|ZP_06302880.1| FeS assembly protein SufD [Staphylococcus aureus A8117]
gi|282929253|ref|ZP_06336826.1| FeS assembly protein SufD [Staphylococcus aureus A10102]
gi|295406547|ref|ZP_06816353.1| FeS assembly protein SufD [Staphylococcus aureus A8819]
gi|296276587|ref|ZP_06859094.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus MR1]
gi|297245273|ref|ZP_06929147.1| FeS assembly protein SufD [Staphylococcus aureus A8796]
gi|13700717|dbj|BAB42014.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246612|dbj|BAB57005.1| similar to ABC transporter-associated protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|147740347|gb|ABQ48645.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH9]
gi|149945780|gb|ABR51716.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus JH1]
gi|156721305|dbj|BAF77722.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257788832|gb|EEV27172.1| FeS assembly protein SufD [Staphylococcus aureus A9781]
gi|257838969|gb|EEV63448.1| FeS assembly protein SufD [Staphylococcus aureus A9763]
gi|257842399|gb|EEV66823.1| FeS assembly protein SufD [Staphylococcus aureus A9719]
gi|257847757|gb|EEV71754.1| FeS assembly protein SufD [Staphylococcus aureus A9299]
gi|257852401|gb|EEV76322.1| FeS assembly protein SufD [Staphylococcus aureus A8115]
gi|257855293|gb|EEV78231.1| FeS assembly protein SufD [Staphylococcus aureus A6300]
gi|257857848|gb|EEV80740.1| FeS assembly protein SufD [Staphylococcus aureus A6224]
gi|257863795|gb|EEV86551.1| FeS assembly protein SufD [Staphylococcus aureus A5937]
gi|262074758|gb|ACY10731.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
ED98]
gi|282589129|gb|EFB94227.1| FeS assembly protein SufD [Staphylococcus aureus A10102]
gi|282762930|gb|EFC03063.1| FeS assembly protein SufD [Staphylococcus aureus A8117]
gi|285816522|gb|ADC37009.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus aureus
04-02981]
gi|294968692|gb|EFG44715.1| FeS assembly protein SufD [Staphylococcus aureus A8819]
gi|297177944|gb|EFH37193.1| FeS assembly protein SufD [Staphylococcus aureus A8796]
gi|312829311|emb|CBX34153.1| feS assembly protein SufD [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128965|gb|EFT84962.1| hypothetical protein CGSSa03_14183 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329724566|gb|EGG61073.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
21172]
Length = 435
Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 191/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+K+ V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKHFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++K + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDKNASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|323438409|gb|EGA96166.1| FeS assembly protein SufD [Staphylococcus aureus O11]
Length = 435
Score = 306 bits (784), Expect = 6e-81, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 191/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|302332528|gb|ADL22721.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 435
Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats.
Identities = 93/455 (20%), Positives = 183/455 (40%), Gaps = 31/455 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYY-AAPKS 94
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQHDVKGDV 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
L + E++ + I+ +A T + K
Sbjct: 68 YQSLSQLPESVREIIDVDHSKNLVIQHNNAIA------------------YTQVDDNASK 109
Query: 155 SGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V
Sbjct: 110 DGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHP 169
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ +++ + +I+ +E + V+Y+E + E + E++A N+ I
Sbjct: 170 VQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNIT 229
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +V G + R + I+W + L G++S
Sbjct: 230 YGSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRS 281
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 282 TSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKS 341
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 342 IANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAE 401
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 402 RLVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|282916163|ref|ZP_06323926.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
D139]
gi|282320111|gb|EFB50458.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
D139]
Length = 435
Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 192/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEVDASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|299536322|ref|ZP_07049635.1| hypothetical protein BFZC1_09890 [Lysinibacillus fusiformis ZC1]
gi|298728308|gb|EFI68870.1| hypothetical protein BFZC1_09890 [Lysinibacillus fusiformis ZC1]
Length = 435
Score = 305 bits (782), Expect = 9e-81, Method: Composition-based stats.
Identities = 100/449 (22%), Positives = 176/449 (39%), Gaps = 29/449 (6%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
+R S EP W E R A + + P R DF + A
Sbjct: 14 VRSFSEANGEPTWFTELRAAALDKVTGLDLPKPDRTNITKWDFMNFPALAVHS------- 66
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ L E + L ++ + + ++ +EL GVIF
Sbjct: 67 ---------EAFPSLDALPEEAKGLIDLEAQE-NLYIQRNNTPAYIKASQELADKGVIFT 116
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ EH +LV+KY T V V ++ AL++A+ G FVY+PK V L F
Sbjct: 117 DIFTAVREHGELVQKYFMTEAVKVDEHKLTALHTALVNGGVFVYVPKNVIIEQPLQVVFL 176
Query: 220 INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
+ + LI+A+ S V+Y+E + + + E+V DNA++ Y V
Sbjct: 177 NDNAEASLYNHVLIVAEANSAVTYVETYISTVEEAKGQANIIAEVVVQDNAQVTYGAVDV 236
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
G +V +R +K+ W + T L G+ S + +
Sbjct: 237 LAKG-------FTTYVNRR-ARLARDAKVDWALGLMNDSDTISENITHLIGDGSHADTKT 288
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+ + G Q+++ T++ H KN+ I+ G+ + + + G + GA + +
Sbjct: 289 VVVGRGEQKLNFTTEVRHWGKNSNGHILKHGVMKDAAQSIFNGIGYIEHGATKADAQQES 348
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
L++ P + H A+ ++ L+Y + RGI + A L+++G
Sbjct: 349 RVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPLQLYYLMSRGISKAEAERLVIHG 408
Query: 460 FVREVLQKLPMEFAVEAQKLIDISLEGSV 488
F+ V+ +LP+E QK + +E V
Sbjct: 409 FLAPVVTQLPIEG---VQKQLTEVIERKV 434
>gi|152977257|ref|YP_001376774.1| FeS assembly protein SufD [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026009|gb|ABS23779.1| FeS assembly protein SufD [Bacillus cytotoxicus NVH 391-98]
Length = 430
Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats.
Identities = 106/453 (23%), Positives = 193/453 (42%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF +S+
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDFIGKGTTLKQESVS 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L + L+ +L G +K V +E K+ G
Sbjct: 69 SLAELPEAVKNLID---------ENNNVLVGRTGTKAFVS-----------LADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +ADE S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANLYNHVLFVADENSSATYVENYVA-DENVTGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V G + +V +RG G ++I W T L G+ S
Sbjct: 228 AVDLLAKG-------VTTYVNRRGVV-GRDARIEWALGLMNDGDTISENVTNLMGDGSFA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGYILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP++ A L
Sbjct: 340 QQSSRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKKEAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--TQLVEV-IERKV 429
>gi|282918613|ref|ZP_06326350.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C427]
gi|282317747|gb|EFB48119.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C427]
Length = 435
Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 94/450 (20%), Positives = 189/450 (42%), Gaps = 27/450 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + +++I
Sbjct: 403 LVIHGFLDPVVRELPIEDVKRQLREVIKRK 432
>gi|254171907|ref|ZP_04878583.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus sp. AM4]
gi|214033803|gb|EEB74629.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus sp. AM4]
Length = 446
Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 128/456 (28%), Positives = 210/456 (46%), Gaps = 33/456 (7%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV- 96
E+ I ++ + EP+WM R A + P I ++L + A I
Sbjct: 15 ENQIEELAKRNREPEWMTRIRYKALEAFERAPL------NDPVISEEELLQFIAKPEIEG 68
Query: 97 ---GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+SLDD+ PE+ ++LGI EQ+ +AG+ D+ + F +E
Sbjct: 69 LPEKVESLDDLPPEMKALLDRLGISEVEQKYIAGLA-------VQTDTGVIYNEFLKEWA 121
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
K G+I +P EA+ ++PDLVK++ + V ++ A ++AV+ G F+Y+ +G++ P
Sbjct: 122 KKGLIVLPTEEAVRKYPDLVKEHFLKLFRVDESKLTAYHTAVWNGGIFLYVKEGLKVPFP 181
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
L +F I E Q +IIA++ + +EGCTAP ++ LH + E +NA+ +
Sbjct: 182 LHLFFLIQESALAQAPHIIIIAEKNTEFHLIEGCTAPILVKHSLHLDMTEAYFHENAKGQ 241
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCR---GMRSKISWTQLETGSAITWKYPSCLLRG 330
+ +QNW +V R R G ++ T + G+ +
Sbjct: 242 LTVLQNWPE-----------YVHTRPMTRAKIGKGARFINTTVGLGTGRSNVANPKYWVD 290
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
E E I + +D G +M K SK + S RG + A
Sbjct: 291 ENGYVELNGILLGQKDWFVDLGGEMYLQGKGAGGINASKAVIMDESTVITRGI--IRAEA 348
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
++ CD+LL+ + T P + SK L HEA KI +E LFY + RG+ EE
Sbjct: 349 PKTKGHISCDALLLSDRATMETYPGLVSKVDDAELSHEAAIGKIREEELFYLMSRGLDEE 408
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
A LIV GF+ +L+ +PMEF VE +K+I++++ G
Sbjct: 409 KATQLIVKGFLEPMLKDIPMEFLVEIRKIIELAVSG 444
>gi|224475952|ref|YP_002633558.1| hypothetical protein Sca_0459 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420559|emb|CAL27373.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 435
Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 94/450 (20%), Positives = 184/450 (40%), Gaps = 27/450 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E + S NEP WM + R A + T++ P + + DFD +
Sbjct: 8 ISEAELVEYSQAHNEPSWMTDLRKEALKLTETLEMPKPDKTKIDKWDFDSFKQLE--TTS 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ ++DV + + + + ++ + E +K
Sbjct: 66 DKYKDINDVPDSIEKVIDV---------------EKSENLIIQHNNTLAFSRVSESAQKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI ++EA+ H DLV+KYL V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEGLAEALVNHGDLVQKYLMQDAVTVDEHRLTALHTALINGGIFVYVPKNVVVENPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ F +I ++ + V+Y+E + E V E++A N++I Y
Sbjct: 171 QYVVLHDDENASFFNHVIIATEQSAEVTYVENYLSDVSGEGSQVNIVSEVIAGANSKITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V G + R + I+W + L G++S
Sbjct: 231 GAVDYLDKG--------FTGHIIRRGVTEADASINWALGLMNEGNQIIDNTTNLIGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+A+ G Q+ + +K++ T I+ G+ + + G + G + S
Sbjct: 283 SELKSVAVGTGSQKSNVTSKIVQYGVETDGYILKHGVVEDSATIIFNGIGYIKHGGSKSV 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ P + H A+ ++ DE L+Y + RGI ++ A
Sbjct: 343 ANQESRVLMLSEKARGDANPILLIDEDDVEAGHAASVGRVDDEQLYYLMSRGISQQEAER 402
Query: 455 LIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + +++I++
Sbjct: 403 LVIHGFLDPVVRELPIEDVKRQLREVIELK 432
>gi|304381533|ref|ZP_07364183.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|304339896|gb|EFM05840.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
Length = 435
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 191/454 (42%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESSVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|240102612|ref|YP_002958921.1| Fe-S cluster containing protein, SufBD related (SufBD)
[Thermococcus gammatolerans EJ3]
gi|239910166|gb|ACS33057.1| Fe-S cluster containing protein, SufBD related (SufBD)
[Thermococcus gammatolerans EJ3]
Length = 446
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 126/453 (27%), Positives = 204/453 (45%), Gaps = 27/453 (5%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E+ I ++ + EP+WM R A + P I + L + A I G
Sbjct: 15 ENQIEELARRNREPEWMTRIRYKALEAFERAPL------NDPVISEERLLQFIAKPEIEG 68
Query: 98 P----QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+SLDD+ PE+ ++LGI EQ+ +AG+ D+ + F +E
Sbjct: 69 LPENIESLDDLPPEMKALLDRLGISEVEQKYIAGLA-------VQTDTGVIYNQFLQEWA 121
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
K G+I +P EA+ ++PDLVK++ + V ++ A ++AV+ G F+Y+ +G++ P
Sbjct: 122 KKGLIVLPTEEAVRKYPDLVKEHFLKLFRVDESKLTAYHTAVWNGGIFLYVKEGLKVPFP 181
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
L +F I E Q +IIA++ + +EGCTAP ++ LH + E + A+ +
Sbjct: 182 LHLFFLIQESALAQAPHIIIIAEKNTEFHLIEGCTAPILVKHSLHLDMTEAYFHEGAKGQ 241
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+ +QNW ++ R I+ T P E
Sbjct: 242 LTVLQNWPEY-------VHTRPMTRAKVGKGARFINTTVGLGTGKSNVANPK-YWVEENG 293
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E I + +D G +M K SK + S RG + A +
Sbjct: 294 YIELNGILLGQKDWFVDLGGEMYLQGKGAGGINASKAVIMDESTVITRGI--IRAEAPKT 351
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ CD+LL+ + T P + SK L HEA KI +E LFY + RG+ EE A
Sbjct: 352 KGHISCDALLLSDKATMETYPGLVSKVDDAELSHEAAIGKIREEELFYLMSRGLDEEKAT 411
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
LIV GF+ +L+ +PMEF VE +K+I++++ G
Sbjct: 412 QLIVKGFLEPMLKDIPMEFLVEIRKIIELAVSG 444
>gi|257866761|ref|ZP_05646414.1| FeS assembly protein SufD [Enterococcus casseliflavus EC30]
gi|257872722|ref|ZP_05652375.1| FeS assembly protein SufD [Enterococcus casseliflavus EC10]
gi|257800719|gb|EEV29747.1| FeS assembly protein SufD [Enterococcus casseliflavus EC30]
gi|257806886|gb|EEV35708.1| FeS assembly protein SufD [Enterococcus casseliflavus EC10]
Length = 434
Score = 304 bits (778), Expect = 3e-80, Method: Composition-based stats.
Identities = 105/450 (23%), Positives = 177/450 (39%), Gaps = 30/450 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ + SA K EP+WMLE R A + + P R+RY ++
Sbjct: 9 EQVNVFSALKEEPEWMLELRQAALAKVDELAFPKIERVRYERWPLFNI------------ 56
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
D + L L + A FD ++ +EL GVI
Sbjct: 57 ------DEQALAGEYALPEEEVAGAVPAFDAMDNHPTLVQFDDTTIFEQLPQELIDKGVI 110
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E P+LV +Y VP+ ++ A ++A G F+Y+PK V L
Sbjct: 111 FTDLFTAMKEVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGMFLYVPKNVVIEEPLEAI 170
Query: 218 FRINEKGTGQF-ERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F N F + LI+ADE S SYLE +L VVE++A A++K+S
Sbjct: 171 FYHNGNSQAHFFKHILIVADEHSEFSYLERFQTKGDQAKKLSGNIVVEVIAKAGAKVKFS 230
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ I ++ +RG + + W L GE +
Sbjct: 231 AIDQLGV-------NITTYMNRRGYVL-RDAMVDWAIGVMNDGDVVADFDSDLVGEGAHS 282
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E ++AIS G Q T++ + A ++ I+ G+ T+ G + +GA +
Sbjct: 283 EVKAVAISAGRQTQGIDTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADA 342
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + H A+ ++ E ++Y + RG+ + A L
Sbjct: 343 QQESRVLMLSDQARGDANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKAEAERL 402
Query: 456 IVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
++ GF+ VL +P+ E E +I+ L
Sbjct: 403 VIRGFLGSVLTAIPVKEVQQELVAVIEGKL 432
>gi|32476186|ref|NP_869180.1| iron-regulated ABC transporter [Rhodopirellula baltica SH 1]
gi|32446730|emb|CAD76566.1| conserved hypothetical protein-putative iron-regulated ABC
transporter [Rhodopirellula baltica SH 1]
Length = 486
Score = 304 bits (778), Expect = 3e-80, Method: Composition-based stats.
Identities = 103/434 (23%), Positives = 194/434 (44%), Gaps = 27/434 (6%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
F++++K+EP W+ + R ++ M W R D+ + K ++
Sbjct: 67 FLASRKDEPQWLTDLRRESFSHADAM---DWPARRSEEWIRTDIRTFQINKFAPPVEATA 123
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
P + + + + V +DS V + EEL GVIF +
Sbjct: 124 GDVPAVHQLRDGV---------------EPGGVLETYDSQVVSESLDEELAAKGVIFGSL 168
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
E PD V+ +L TVV + +AAL++A ++ G F+Y+P+GV + +++
Sbjct: 169 ERLCREQPDKVRPFLYTVVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSD 228
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
GT TLI+ ++G+ + L C + + LH VEL+ + ++Y VQ W
Sbjct: 229 GGTDTA-HTLIVLEDGAEATVLHECNSANPEAAGLHMGAVELIQKPGSHLRYVNVQEWG- 286
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
Y+F ++ + S++ WT GS ++ S + G + + +
Sbjct: 287 ------HKTYHFAHQQANI-DRDSQLQWTIAAMGSGLSKVNQSVDMVGAGANCQVNGVMF 339
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ G Q + T+ H A N S + K S +RG + V + A + + + D+L
Sbjct: 340 TEGRQHLAYHTQQYHRAPNCHSDFLYKSAQQDKSRTVWRGMIKVDKVAQKTDGYQRNDNL 399
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
++ N+ A +IP +E + H +TT+K+ +E +FY RG ++ A +IV+GF +
Sbjct: 400 VLSNHSRADSIPGLEIEADDVRCTHGSTTAKVDEEQIFYARCRGFTQKEATRMIVSGFFQ 459
Query: 463 EVLQKLPMEFAVEA 476
++ ++ +E +A
Sbjct: 460 QIFDRITIESVRDA 473
>gi|222150793|ref|YP_002559946.1| hypothetical protein MCCL_0543 [Macrococcus caseolyticus JCSC5402]
gi|222119915|dbj|BAH17250.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 434
Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats.
Identities = 90/453 (19%), Positives = 187/453 (41%), Gaps = 28/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++I+ +SA + EP WM+ R A + T++ P + + +FD + ++
Sbjct: 8 TQEILTDLSAARKEPSWMVSLRQDALNKLNTIEMPKPDKTKLDKWNFDVHHKVVESETFT 67
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++L + L+ + ++ A ++ +E+L+ G
Sbjct: 68 SKEALPESVKALIDLENTHNLIVQHNNTPAFIE------------------IEEKLQSQG 109
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VI I A+ EH +LV++Y T V V ++ AL++A+ G F+Y+P+ V +
Sbjct: 110 VIITDIQTALTEHSELVEQYYMTDAVKVDEHRLTALHAAMMNGGLFIYVPRNVVIEHPVQ 169
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + F +I+A+E S V+Y+E + + E++A DNA++ Y
Sbjct: 170 YIVLHDNEDANLFNHVIIVAEESSEVTYVENYLSGVTAAKGQLNIISEVIAKDNAKVNYG 229
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V ++ D G R + I W T + L G+ S
Sbjct: 230 AV-DFLNKDLVGH-------VIRRGIANRDAVIDWALGLMNDGDTIHDNTTYLMGDDSKS 281
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + G Q+++ ++++ K + I+ G+ +++ + G + G +
Sbjct: 282 NLKIVVVGRGSQKLNFTSQIIQYGKRSEGHILKHGVMKDSASSIFNGIGYIKHGGTKADA 341
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ LFY + RGI ++ A L
Sbjct: 342 QQESRVLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPMQLFYLMSRGISKQEAERL 401
Query: 456 IVNGFVREVLQKLPMEFA-VEAQKLIDISLEGS 487
+++GF+ V+ LP+E + ++I+ + G
Sbjct: 402 VIHGFLAPVVNALPIEAVKKQLTEVIESKVTGK 434
>gi|73663169|ref|YP_301950.1| hypothetical protein SSP1860 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495684|dbj|BAE19005.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 435
Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats.
Identities = 102/450 (22%), Positives = 189/450 (42%), Gaps = 27/450 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E + S NEP W+ E R A + T++ P + + DFD + +
Sbjct: 8 ISEAQLVEYSQAHNEPAWLTELRKEALKLTETLEMPKPDKTKINRWDFDSFKQHE--TTG 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
QSL+ + + I I E L + +A + DS K
Sbjct: 66 DVYQSLEALPEAVKE-----IIDIENSENLIIQHNNTLAFSKISDSA----------KND 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ HPDLVK+Y V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALVNHPDLVKQYFMKEAVVVDEHRLTALHTALLNGGMFVYVPKNVVVEHPI 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++ + +I A+E + V+Y+E + E + E++A N++I Y
Sbjct: 171 QYVVLHDDNQASFYNHVIIAAEESAEVTYVENYLSNADGEGNQLNIISEVIAGANSKITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R +KI+W + L G++S
Sbjct: 231 GSVDYLDKG--------FTGHIIRRGTADADAKINWALGLMNEGSQIIDNTTNLIGDRSE 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E S+ + G Q+I+ +K++ K T I+ G+ ++ + G + G S
Sbjct: 283 SELKSVVVGTGSQKINLTSKIVQYGKETIGYILKHGVMLESASTVFNGIGYIKHGGTKSN 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ N P + H A+ ++ E L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRQEAER 402
Query: 455 LIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + +++I++
Sbjct: 403 LVIHGFLDPVVRELPIEDVKRQLREVIELK 432
>gi|295695245|ref|YP_003588483.1| FeS assembly protein SufD [Bacillus tusciae DSM 2912]
gi|295410847|gb|ADG05339.1| FeS assembly protein SufD [Bacillus tusciae DSM 2912]
Length = 440
Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats.
Identities = 112/452 (24%), Positives = 203/452 (44%), Gaps = 25/452 (5%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++ + ++ ++ EP W+ EWRL ++ R+ + P R F++
Sbjct: 9 IDRAAVERLAQERGEPAWLREWRLESWDRYTRLPMPKLERSDLGKRSFEE---------- 58
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD-SVSVVTTFKEELKK 154
+ D L G+ + LAG ++ A AVF S + L
Sbjct: 59 -KWRMEADAGVALQSGNSTFGVAEDQ---LAGPDRAEAAATAVFSGSGRPRIHLQASLDD 114
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV +S A E ++V++ L ++V G+N + AL SA + G FVY+PKGVR +
Sbjct: 115 RGVYVADLSTAAREREEVVRRTLGSLVSPGENRWTALQSACWNAGLFVYVPKGVRVEAPV 174
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELV-ALDNAEIK 273
+R + F R L + +EG+ ++ +E + + + AVV+ N E++
Sbjct: 175 LISYRWEDPRNPIFPRVLAVVEEGASLTLVETWSGTELGQEGASTAVVDEYLVEANGELR 234
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+T+Q+ + F+T+RG +++ W E G A L G S
Sbjct: 235 VATLQDLPRE-------VTGFLTRRGRT-ARDARLDWAIGEMGEAYLVAEYGTNLEGPGS 286
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E +A+ G Q +D M+H + T S I+++G++ S+ +R + +GA +
Sbjct: 287 RSEAKVVAVGTGRQHLDLTLHMVHRGRFTVSDILARGVALDRSDLVFRAVTGIEKGAVGT 346
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
LL+ A+ IP + + +H A+ KI+ E ++Y + RGIPE+ A
Sbjct: 347 DGHQAEGLLLLSPKARANAIPMLLIDENDVKADHAASVGKINAEQMYYLMSRGIPEDEAK 406
Query: 454 ALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
LIV GF+ V+ +LP+ + ++L++ +
Sbjct: 407 RLIVRGFLDPVIDRLPLADVKGWMERLVERKM 438
>gi|168060623|ref|XP_001782294.1| ATP-binding cassette transporter, subfamily I, member 17, ABC
component protein PpABCI17 [Physcomitrella patens subsp.
patens]
gi|162666224|gb|EDQ52884.1| ATP-binding cassette transporter, subfamily I, member 17, ABC
component protein PpABCI17 [Physcomitrella patens subsp.
patens]
Length = 478
Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats.
Identities = 170/459 (37%), Positives = 260/459 (56%), Gaps = 31/459 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L E++I IS + +EP+WML++RL A +WL MK+P IDF + +A
Sbjct: 41 LTEEVITMISKRNDEPEWMLQFRLNALNQWLMMKEPEELLQTSRRIDFRTVCDFA----- 95
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD-SVSVVTTFKEELKK 154
+ R+ A Q + D S S TT ++ L +
Sbjct: 96 -------------------SRVYQRDDNSSANSQRVLSSDAGTSDNSDSFATTHQKALAE 136
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
+GVIF ISEAI ++P+LV+KYL VV +N++AALNSA+FTDGSF Y+PK CP+++
Sbjct: 137 AGVIFCSISEAIQKYPELVRKYLGKVVSSSENYFAALNSAIFTDGSFCYVPKNTICPIDI 196
Query: 215 STYFRINEKG-TGQFERTLIIADEGSYVSYL--EGCTAPQRDENQLHAAVVELVALDNAE 271
STYF + + T FER LII +EGSYVS L + QL+A V+EL + AE
Sbjct: 197 STYFLVEGRKVTNLFERNLIICEEGSYVSSLGCTSPSPSMDASQQLNAPVIELYCAEGAE 256
Query: 272 IKYSTVQNWYPGDSQGK---GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
IKY V+NW + +YNFVT+RG C G RSKI+W +E GS I W +P+ +L
Sbjct: 257 IKYFVVENWQEPGANRSPVQSEVYNFVTQRGLCDGPRSKITWITVELGSTIAWHHPTVVL 316
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
+G S G+ +S+ + N Q D G +++H+ NT SR+VSK + AG S+ +R V +H
Sbjct: 317 KGNGSTGQSFSMTMLNSGQFADMGARIIHMGSNTKSRVVSKSVHAGNSHGCFRSYVEIHP 376
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
A ++R+ D++L+G + A + P +N+S ++ E + S +++ +FY QRGI
Sbjct: 377 LAKNARSEVTWDAMLLGPHAEAVSYPSSTVRNTSAQIKQEGSASGVNEHTVFYFQQRGIE 436
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
+ A+ I+ GF ++L++LP EF E + ++++ +E S
Sbjct: 437 FQKAVQTILTGFCSDILRELPCEFEEEVKVMVELKIEES 475
>gi|325567128|ref|ZP_08143795.1| FeS assembly protein SufD [Enterococcus casseliflavus ATCC 12755]
gi|325158561|gb|EGC70707.1| FeS assembly protein SufD [Enterococcus casseliflavus ATCC 12755]
Length = 434
Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats.
Identities = 105/450 (23%), Positives = 177/450 (39%), Gaps = 30/450 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ + SA K EP+WMLE R A + + P R+RY ++
Sbjct: 9 EQVNVFSALKEEPEWMLELRQAALAKVDELAFPKIERVRYERWPLFNI------------ 56
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
D + L L + A FD ++ +EL GVI
Sbjct: 57 ------DEQALAGEYALSEEEVAGAVPAFDAMDNHPTLVQFDDTTIFEQLPQELIDKGVI 110
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E P+LV +Y VP+ ++ A ++A G F+Y+PK V L
Sbjct: 111 FTDLFTAMKEVPELVNQYYMTKAVPMDEDKMTAAHAAFMNSGMFLYVPKNVVIEEPLEAI 170
Query: 218 FRINEKGTGQF-ERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F N F + LI+ADE S SYLE +L VVE++A A++K+S
Sbjct: 171 FYHNGNSQAHFFKHILIVADEHSEFSYLERFQTKGEQAKKLSGNIVVEVIAKAGAKVKFS 230
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ I ++ +RG + + W L GE +
Sbjct: 231 AIDQLGV-------NITTYMNRRGYVL-RDAMVDWAIGVMNEGDVVADFDSDLVGEGAHS 282
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E ++AIS G Q T++ + A ++ I+ G+ T+ G + +GA +
Sbjct: 283 EVKAVAISAGRQTQGIDTRVTNKAPHSIGHILQHGVIRERGVLTFNGIGHILKGAKGADA 342
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + H A+ ++ E ++Y + RG+ + A L
Sbjct: 343 QQESRVLMLSDQARGDANPILLIDEHEVTAGHAASVGRVDPEEMYYLMSRGLRKAEAERL 402
Query: 456 IVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
++ GF+ VL +P+ E E +I+ L
Sbjct: 403 VIRGFLGSVLTAIPVKEVQQELVAVIEGKL 432
>gi|298694153|gb|ADI97375.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 435
Score = 302 bits (773), Expect = 9e-80, Method: Composition-based stats.
Identities = 94/454 (20%), Positives = 187/454 (41%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L +RE + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQLPESVRE----IIDVNHSKNLVIQHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + RGI + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDYVQAGHAASVGRVDPDQLYYLMSRGISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|327439105|dbj|BAK15470.1| ABC-type transport system [Solibacillus silvestris StLB046]
Length = 435
Score = 302 bits (773), Expect = 9e-80, Method: Composition-based stats.
Identities = 102/454 (22%), Positives = 189/454 (41%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ + +R S K EP ++R+ A + + P R +F D + +
Sbjct: 9 LSAEEVRSFSQKHAEPASFADFRVSAMEKAAALDLPKPDRTNINKWNFIDFANHTVESAP 68
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ L E + + +T + + ++ +ELK
Sbjct: 69 ----------------FNSLEELPVEVKSVVDTETQE-NLYIQRNNTPAFIKISDELKNK 111
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I AI +H DLV+KY T V V ++ A ++A+ G FVY+P+ V L
Sbjct: 112 GVIFTDIQTAIRDHKDLVEKYFMTTAVKVDEHKLTAYHAALVNGGIFVYVPRNVVIEAPL 171
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
F + F L++A+E S V+Y+E + + + V E++A DNA++ +
Sbjct: 172 QVVFLNDNAEASLFNHVLVVAEESSAVTYVETYISTFDEAHGQVNVVTEVIAKDNAQVTF 231
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V N G +V +RG + +KI W ++ T + L G+ S
Sbjct: 232 GAVDNLA-------HGYTAYVNRRGHVQ-RDAKIDWALGLMTNSDTIYENTTNLIGDNST 283
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+F + + +G Q+++ T + KN+ +I+ G+ + + + G + G +
Sbjct: 284 SDFKMVTVGSGDQKLNFTTLIRQWGKNSDGQILKHGVMKDSAQSIFNGIGHIMHGGTKAN 343
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ P + H A+ ++ L+Y + RGI + A
Sbjct: 344 AEQESRVLMLSEGARGDANPILLIDEDDVTAGHAASVGRVDPTQLYYLMSRGISKAEAER 403
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+ KLP+E +K + +E V
Sbjct: 404 LVIHGFLAPVVAKLPIEG---VKKQLTEVIERKV 434
>gi|328951403|ref|YP_004368738.1| FeS assembly protein SufD [Marinithermus hydrothermalis DSM 14884]
gi|328451727|gb|AEB12628.1| FeS assembly protein SufD [Marinithermus hydrothermalis DSM 14884]
Length = 443
Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 106/461 (22%), Positives = 201/461 (43%), Gaps = 34/461 (7%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ + + +S EP W+ + RL A+ + + P+ + + D+
Sbjct: 7 LSRERVETLSQTLGEPAWLTQARLAAWEAYKDLPFPTP---KTEEWKYTDIR-------- 55
Query: 96 VGPQSLDDVDPELL--RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+D+ E RT + +P Q L + +AV D V EEL+
Sbjct: 56 --NLPFEDLPLETPTGRTLTREALPQAVQARLERTDAAAIAVFVGPDLAYV--ELPEELR 111
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGD------NFYAALNSAVFTDGSFVYIPKG 207
+ GVI + A+ EHP+ V+ L VP + ALN+A +T G F+Y+PKG
Sbjct: 112 EKGVIVTDLRTALAEHPEKVRPALYRAVPATSPTPGAPDKLTALNAAFWTYGIFIYLPKG 171
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
V + + + G RTLI+A+E + +YLE +P D +H +V EL+
Sbjct: 172 VTLEAPIGIFKYLETGGALSVGRTLIVAEETAQGAYLEEYLSPALDAPAIHVSVSELLLH 231
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
A ++++ VQ+W G +++F +R ++++ G ++
Sbjct: 232 PGAILRHANVQSWGRG-------VHHFHRQRAL-LEKDARLNDLVATFGGTLSRAEVQSE 283
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L G + E I ++ Q D T H+A + S ++ KG + + Y G + +
Sbjct: 284 LVGPGADSEMLGIYFAHADQHFDHYTLQHHVADHARSDVLYKGAAKDRARTVYSGLIRLE 343
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
GA + + +LL+ + ++P +E + H ++T+ + + + Y + RG+
Sbjct: 344 PGAQKTDAYQTNRNLLLSPEARSDSVPQLEIAANDVRCSHGSSTAPVDETQVLYLMSRGL 403
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
P A L+V F+ +VL ++P+ ++ ++ +E V
Sbjct: 404 PRTLAEQLLVKAFLADVLTRIPLPA---LRQHLETVIEEKV 441
>gi|327537446|gb|EGF24171.1| FeS assembly protein SufD [Rhodopirellula baltica WH47]
Length = 464
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 102/434 (23%), Positives = 194/434 (44%), Gaps = 27/434 (6%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
F++++K+EP W+ + R ++ M W R D+ + K ++
Sbjct: 45 FLASRKDEPQWLTDLRRESFSHADAM---DWPARRSEEWIRTDIRTFQINKFAPPVEATA 101
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
P + + + + V +DS + + EEL GVIF +
Sbjct: 102 GDVPAVHQLRDGV---------------EPGGVLETYDSQVISESLDEELAAKGVIFGSL 146
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
E PD V+ +L TVV + +AAL++A ++ G F+Y+P+GV + +++
Sbjct: 147 ERLCREQPDKVRPFLYTVVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSD 206
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
GT TLI+ ++G+ + L C + + LH VEL+ + ++Y VQ W
Sbjct: 207 GGTDTA-HTLIVLEDGAEATVLHECNSANPEAAGLHMGAVELIQKPGSHLRYVNVQEWGH 265
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
Y+F ++ + S++ WT GS ++ S + G + + +
Sbjct: 266 K-------TYHFAHQQANI-DRDSQLQWTIAAMGSGLSKVNQSVDMVGAGANCQVNGVMF 317
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ G Q + T+ H A N S + K S +RG + V + A + + + D+L
Sbjct: 318 TEGRQHLAYHTQQYHRAPNCHSDFLYKSAQQDKSRTVWRGMIKVDKVAQKTDGYQRNDNL 377
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
++ N+ A +IP +E + H +TT+K+ +E +FY RG ++ A +IV+GF +
Sbjct: 378 VLSNHSRADSIPGLEIEADDVRCTHGSTTAKVDEEQIFYARCRGFTQKEATRMIVSGFFQ 437
Query: 463 EVLQKLPMEFAVEA 476
++ ++ +E +A
Sbjct: 438 QIFDRITIESVRDA 451
>gi|282903451|ref|ZP_06311342.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C160]
gi|282596406|gb|EFC01367.1| FeS assembly protein SufD [Staphylococcus aureus subsp. aureus
C160]
Length = 435
Score = 301 bits (771), Expect = 2e-79, Method: Composition-based stats.
Identities = 94/454 (20%), Positives = 190/454 (41%), Gaps = 29/454 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQH------ 61
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
DV ++ ++ +L P +EI+ + + + ++ T + K
Sbjct: 62 -------DVKGDVYQSLSQL--PESVREIIDVDHSKNLVI--QHNNTIAYTQVDDNASKD 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +++A+ H DLV+KY V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ + +I+ +E + V+Y+E + E + E++A N+ I Y
Sbjct: 171 QYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITY 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+V G + R + I+W + L G++S
Sbjct: 231 GSVDYMDKG--------FTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRST 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 283 SSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSI 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + P + H A+ ++ + L+Y + R I + A
Sbjct: 343 ANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRRISQREAER 402
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L+++GF+ V+++LP+E + ++ + +E V
Sbjct: 403 LVIHGFLDPVVRELPIE---DVKRQLREVIERKV 433
>gi|49480357|ref|YP_039001.1| iron-regulated ABC transporter [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49331913|gb|AAT62559.1| probable iron-regulated ABC transporter [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 430
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPTQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229199128|ref|ZP_04325811.1| hypothetical protein bcere0001_46410 [Bacillus cereus m1293]
gi|228584399|gb|EEK42534.1| hypothetical protein bcere0001_46410 [Bacillus cereus m1293]
Length = 430
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 188/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G ++ W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRVDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K + I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKQSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPTQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|206976419|ref|ZP_03237326.1| FeS assembly protein SufD [Bacillus cereus H3081.97]
gi|222098430|ref|YP_002532488.1| iron-regulated ABC transporter [Bacillus cereus Q1]
gi|206745343|gb|EDZ56743.1| FeS assembly protein SufD [Bacillus cereus H3081.97]
gi|221242489|gb|ACM15199.1| probable iron-regulated ABC transporter [Bacillus cereus Q1]
gi|324328912|gb|ADY24172.1| putative iron-regulated ABC transporter [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 430
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G ++ W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRVDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPTQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|315658800|ref|ZP_07911667.1| FeS assembly protein SufD [Staphylococcus lugdunensis M23590]
gi|315495924|gb|EFU84252.1| FeS assembly protein SufD [Staphylococcus lugdunensis M23590]
Length = 435
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 96/451 (21%), Positives = 191/451 (42%), Gaps = 29/451 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKS 94
++E+ + S +EP WM + R A + T++ P + + DFD ++ +
Sbjct: 8 ISEEQLVDYSKALHEPSWMTDSRKKALKLTETLEMPKPDKTKLRKWDFDSFQQHHVDGAT 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
L + +++ + I+ LA T ++ K+
Sbjct: 68 FKDLSELPESINKIINVETSENLIIQHNNTLA------------------YTQVSDQAKQ 109
Query: 155 SGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
GVI +SEA+ H DLV+KYL T V V ++ AL++A+ G FVY+PK V
Sbjct: 110 DGVIIEGLSEALVNHGDLVQKYLMTEAVQVDEHRLTALHAALINGGVFVYVPKNVVVEHP 169
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ ++ F +++ +E + V+Y+E + + + E++A N+ I
Sbjct: 170 IHYVVLHDDDKASFFNHVILVTEESAEVTYVENYVSDASGDGNQINIISEVIAGANSSIT 229
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +V G ++ +RG + I+W + L G++S
Sbjct: 230 YGSVDYLDKG-------FTGYIIRRGHTEAD-ASINWALGLMNEGSQIIDNTTNLVGDRS 281
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 282 TSELKSVVVGTGDQKINLTSKIVQYGKETNGYILKHGVMKEHASSVFNGIGHIKHGGTKS 341
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ + P + H A+ ++ E L+Y + RGI + A
Sbjct: 342 IANQESRVLMLSEHSRGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQHEAE 401
Query: 454 ALIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + + +I++
Sbjct: 402 RLVIHGFLDPVVRELPIEDVKRQLRDVIELK 432
>gi|229187219|ref|ZP_04314364.1| hypothetical protein bcere0004_47550 [Bacillus cereus BGSC 6E1]
gi|228596229|gb|EEK53904.1| hypothetical protein bcere0004_47550 [Bacillus cereus BGSC 6E1]
Length = 430
Score = 299 bits (766), Expect = 6e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENATGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|118480066|ref|YP_897217.1| FeS assembly protein SufB [Bacillus thuringiensis str. Al Hakam]
gi|196044033|ref|ZP_03111270.1| FeS assembly protein SufD [Bacillus cereus 03BB108]
gi|118419291|gb|ABK87710.1| Iron-regulated ABC transporter permease protein SufD [Bacillus
thuringiensis str. Al Hakam]
gi|196025369|gb|EDX64039.1| FeS assembly protein SufD [Bacillus cereus 03BB108]
Length = 430
Score = 299 bits (766), Expect = 6e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229014171|ref|ZP_04171292.1| hypothetical protein bmyco0001_45760 [Bacillus mycoides DSM 2048]
gi|228747125|gb|EEL97007.1| hypothetical protein bmyco0001_45760 [Bacillus mycoides DSM 2048]
Length = 430
Score = 299 bits (766), Expect = 6e-79, Method: Composition-based stats.
Identities = 103/453 (22%), Positives = 190/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLIELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S V+Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTVTYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|225866953|ref|YP_002752331.1| FeS assembly protein SufD [Bacillus cereus 03BB102]
gi|225790807|gb|ACO31024.1| FeS assembly protein SufD [Bacillus cereus 03BB102]
Length = 430
Score = 299 bits (766), Expect = 6e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENATGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|217962445|ref|YP_002341017.1| FeS assembly protein SufD [Bacillus cereus AH187]
gi|229141699|ref|ZP_04270229.1| hypothetical protein bcere0013_47890 [Bacillus cereus BDRD-ST26]
gi|217063901|gb|ACJ78151.1| FeS assembly protein SufD [Bacillus cereus AH187]
gi|228641767|gb|EEK98068.1| hypothetical protein bcere0013_47890 [Bacillus cereus BDRD-ST26]
Length = 430
Score = 299 bits (766), Expect = 6e-79, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTAAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G ++ W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRVDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPTQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|296122638|ref|YP_003630416.1| FeS assembly protein SufD [Planctomyces limnophilus DSM 3776]
gi|296014978|gb|ADG68217.1| FeS assembly protein SufD [Planctomyces limnophilus DSM 3776]
Length = 455
Score = 299 bits (766), Expect = 7e-79, Method: Composition-based stats.
Identities = 103/456 (22%), Positives = 190/456 (41%), Gaps = 18/456 (3%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
G ++++ + ++EP W+ E R A+ ++ + + ID L P
Sbjct: 12 GFSQEVFEQFLSSRHEPAWVSELRREAFAKYTEFLEQPLDPEEWKRIDLRAL----KPSQ 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ + E P L + D SV++ EEL
Sbjct: 68 FHLVTTQAAAEANAASGLEANSDPAI--GTLLADRAEFAGRVIHVDGQSVISELSEELAA 125
Query: 155 SGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
GV+F +++ I H +L+K YL V + +A ++A +T G+ +Y+P+ VR
Sbjct: 126 RGVVFGSLTQLIQTHGELLKPYLMQKAVKHDQDRMSAWHAAFWTGGTVLYVPRNVRVEAP 185
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
L + + F T++I ++G+ + LE T+ LH VEL+ A ++
Sbjct: 186 LYGLVALAKDKAADFSHTIVILEDGAEATLLEETTSLHATHAGLHVGGVELLLGQEARLR 245
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +QNW ++ T+ G + WT GS + + L G +
Sbjct: 246 YVQLQNW-------NHRTWHLATQAGHV-EKDGFLQWTVGGLGSRLAHTHQDVSLDGRGA 297
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ + + Q I T+ H A +T S ++ K + S +RG + V +GA +
Sbjct: 298 VAQVNGVTFAINRQVISYYTQQTHRAPDTRSDLLYKDVLRDESRVIWRGMIDVEKGAPRT 357
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ + DSLL+ A IP +E + H AT ++ + + YC+ RG+ A+
Sbjct: 358 DGYQRNDSLLLSTTARADAIPGLEIETDDVRCTHGATVGEVDQDQILYCMCRGLSRHEAM 417
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+IV GF ++V ++P+ E + ++E +G
Sbjct: 418 HMIVEGFFQQVYDRIPVPAVQET---LSQAVERKLG 450
>gi|42784165|ref|NP_981412.1| hypothetical protein BCE_5119 [Bacillus cereus ATCC 10987]
gi|42740096|gb|AAS44020.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 430
Score = 299 bits (766), Expect = 7e-79, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATALPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G ++ W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRVDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPTQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|163942697|ref|YP_001647581.1| FeS assembly protein SufD [Bacillus weihenstephanensis KBAB4]
gi|163864894|gb|ABY45953.1| FeS assembly protein SufD [Bacillus weihenstephanensis KBAB4]
Length = 430
Score = 299 bits (765), Expect = 7e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229169704|ref|ZP_04297404.1| hypothetical protein bcere0007_46480 [Bacillus cereus AH621]
gi|228613743|gb|EEK70868.1| hypothetical protein bcere0007_46480 [Bacillus cereus AH621]
Length = 430
Score = 299 bits (765), Expect = 7e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSFA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|239828242|ref|YP_002950866.1| FeS assembly protein SufD [Geobacillus sp. WCH70]
gi|239808535|gb|ACS25600.1| FeS assembly protein SufD [Geobacillus sp. WCH70]
Length = 437
Score = 299 bits (765), Expect = 8e-79, Method: Composition-based stats.
Identities = 103/453 (22%), Positives = 186/453 (41%), Gaps = 28/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ +R S+ + EPDW+L+ RL A + + P + + +F + +
Sbjct: 10 DQQYVRSFSSGRGEPDWLLQLRLQALAKAEELPLPKPDKTKIDKWNFTQFANHVVESAP- 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L + L + D + +ELK G
Sbjct: 69 ---------------FASLDELPEAVKALIEAGEGTKNLYVQRDHTPAYLSLSDELKAKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DL++KYL V + ++ AL++A+ G FVY+PK V + L
Sbjct: 114 VIFTDIFTAAREHGDLLQKYLMKDGVKIDEHRLTALHAALLNGGVFVYVPKNVVVDVPLQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ F +++A++ S V Y+E + + + V E+ A NA + ++
Sbjct: 174 AVYIQENDDIALFNHVIVVAEDNSRVVYVENYISVKETSKAVVNIVAEVFANTNARVFFA 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G I +V +RG +I W T L G+ S G
Sbjct: 234 AVDNLAKG-------ITTYVNRRGIA-ARDGRIEWALGLMNDGDTVSENITRLIGDGSFG 285
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T ++H K+T I+ G+ + + + G + GA+ S
Sbjct: 286 DTKTVVVGRGEQVQNFTTSVVHYGKHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNA 345
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ +I L+Y + RGIP+ A L
Sbjct: 346 QQESRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRIDPTQLYYLMSRGIPKHEAERL 405
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
I++GF+ V++ +P+E ++LI++ +E V
Sbjct: 406 IIHGFLAPVVEAIPIESVK--KQLIEV-IERKV 435
>gi|47567019|ref|ZP_00237736.1| FeS assembly protein sufD [Bacillus cereus G9241]
gi|52140551|ref|YP_086278.1| iron-regulated ABC transporter [Bacillus cereus E33L]
gi|196040538|ref|ZP_03107838.1| FeS assembly protein SufD [Bacillus cereus NVH0597-99]
gi|228917609|ref|ZP_04081153.1| hypothetical protein bthur0012_48150 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228988224|ref|ZP_04148321.1| hypothetical protein bthur0001_48820 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229158578|ref|ZP_04286637.1| hypothetical protein bcere0010_47510 [Bacillus cereus ATCC 4342]
gi|254725326|ref|ZP_05187109.1| iron-regulated ABC transporter [Bacillus anthracis str. A1055]
gi|300119649|ref|ZP_07057191.1| iron-regulated ABC transporter [Bacillus cereus SJ1]
gi|301056470|ref|YP_003794681.1| putative iron-regulated ABC transporter [Bacillus anthracis CI]
gi|47556337|gb|EAL14671.1| FeS assembly protein sufD [Bacillus cereus G9241]
gi|51974020|gb|AAU15570.1| probable iron-regulated ABC transporter [Bacillus cereus E33L]
gi|196028670|gb|EDX67277.1| FeS assembly protein SufD [Bacillus cereus NVH0597-99]
gi|228624892|gb|EEK81660.1| hypothetical protein bcere0010_47510 [Bacillus cereus ATCC 4342]
gi|228771521|gb|EEM19990.1| hypothetical protein bthur0001_48820 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228842089|gb|EEM87192.1| hypothetical protein bthur0012_48150 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|298722944|gb|EFI63844.1| iron-regulated ABC transporter [Bacillus cereus SJ1]
gi|300378639|gb|ADK07543.1| probable iron-regulated ABC transporter [Bacillus cereus biovar
anthracis str. CI]
Length = 430
Score = 299 bits (765), Expect = 8e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229153174|ref|ZP_04281353.1| hypothetical protein bcere0011_47040 [Bacillus cereus m1550]
gi|228630273|gb|EEK86923.1| hypothetical protein bcere0011_47040 [Bacillus cereus m1550]
Length = 430
Score = 299 bits (765), Expect = 8e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQGP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|228993714|ref|ZP_04153619.1| hypothetical protein bpmyx0001_44390 [Bacillus pseudomycoides DSM
12442]
gi|229007312|ref|ZP_04164911.1| hypothetical protein bmyco0002_41930 [Bacillus mycoides Rock1-4]
gi|228753917|gb|EEM03356.1| hypothetical protein bmyco0002_41930 [Bacillus mycoides Rock1-4]
gi|228765925|gb|EEM14574.1| hypothetical protein bpmyx0001_44390 [Bacillus pseudomycoides DSM
12442]
Length = 430
Score = 299 bits (765), Expect = 8e-79, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 188/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDFIGKGHTAK---QE 65
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 66 PVSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSSATYVENYVAN-ETVTGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIEWALGLMNDGNTISENVTNLMGDGSFA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGFILKHGVQTDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP++ A L
Sbjct: 340 QQSSRVLMLNEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKKEAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229135810|ref|ZP_04264580.1| hypothetical protein bcere0014_46930 [Bacillus cereus BDRD-ST196]
gi|228647676|gb|EEL03741.1| hypothetical protein bcere0014_46930 [Bacillus cereus BDRD-ST196]
Length = 430
Score = 299 bits (765), Expect = 9e-79, Method: Composition-based stats.
Identities = 103/453 (22%), Positives = 190/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ N P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDENARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|228923714|ref|ZP_04086992.1| hypothetical protein bthur0011_46890 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835843|gb|EEM81206.1| hypothetical protein bthur0011_46890 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 430
Score = 299 bits (765), Expect = 9e-79, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAAIEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229076358|ref|ZP_04209323.1| hypothetical protein bcere0024_46620 [Bacillus cereus Rock4-18]
gi|229099441|ref|ZP_04230370.1| hypothetical protein bcere0020_46590 [Bacillus cereus Rock3-29]
gi|229105598|ref|ZP_04236232.1| hypothetical protein bcere0019_47270 [Bacillus cereus Rock3-28]
gi|229118454|ref|ZP_04247808.1| hypothetical protein bcere0017_47210 [Bacillus cereus Rock1-3]
gi|228665024|gb|EEL20512.1| hypothetical protein bcere0017_47210 [Bacillus cereus Rock1-3]
gi|228677868|gb|EEL32111.1| hypothetical protein bcere0019_47270 [Bacillus cereus Rock3-28]
gi|228683937|gb|EEL37886.1| hypothetical protein bcere0020_46590 [Bacillus cereus Rock3-29]
gi|228706793|gb|EEL59001.1| hypothetical protein bcere0024_46620 [Bacillus cereus Rock4-18]
Length = 430
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +L++KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELLQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|30023022|ref|NP_834653.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
gi|206969994|ref|ZP_03230947.1| FeS assembly protein SufD [Bacillus cereus AH1134]
gi|218233282|ref|YP_002369784.1| FeS assembly protein SufD [Bacillus cereus B4264]
gi|228955249|ref|ZP_04117257.1| hypothetical protein bthur0006_46070 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229049674|ref|ZP_04194231.1| hypothetical protein bcere0027_46320 [Bacillus cereus AH676]
gi|229072472|ref|ZP_04205674.1| hypothetical protein bcere0025_46330 [Bacillus cereus F65185]
gi|229082231|ref|ZP_04214694.1| hypothetical protein bcere0023_48480 [Bacillus cereus Rock4-2]
gi|229112427|ref|ZP_04241965.1| hypothetical protein bcere0018_46670 [Bacillus cereus Rock1-15]
gi|229130240|ref|ZP_04259199.1| hypothetical protein bcere0015_46760 [Bacillus cereus BDRD-Cer4]
gi|229147530|ref|ZP_04275877.1| hypothetical protein bcere0012_46590 [Bacillus cereus BDRD-ST24]
gi|296505419|ref|YP_003667119.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
gi|29898582|gb|AAP11854.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579]
gi|206734571|gb|EDZ51740.1| FeS assembly protein SufD [Bacillus cereus AH1134]
gi|218161239|gb|ACK61231.1| FeS assembly protein SufD [Bacillus cereus B4264]
gi|228635956|gb|EEK92439.1| hypothetical protein bcere0012_46590 [Bacillus cereus BDRD-ST24]
gi|228653173|gb|EEL09052.1| hypothetical protein bcere0015_46760 [Bacillus cereus BDRD-Cer4]
gi|228671075|gb|EEL26381.1| hypothetical protein bcere0018_46670 [Bacillus cereus Rock1-15]
gi|228700663|gb|EEL53186.1| hypothetical protein bcere0023_48480 [Bacillus cereus Rock4-2]
gi|228710448|gb|EEL62421.1| hypothetical protein bcere0025_46330 [Bacillus cereus F65185]
gi|228722587|gb|EEL73975.1| hypothetical protein bcere0027_46320 [Bacillus cereus AH676]
gi|228804382|gb|EEM50993.1| hypothetical protein bthur0006_46070 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|296326471|gb|ADH09399.1| ABC transporter-associated protein [Bacillus thuringiensis BMB171]
Length = 430
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|75760715|ref|ZP_00740739.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218900137|ref|YP_002448548.1| FeS assembly protein SufD [Bacillus cereus G9842]
gi|228903487|ref|ZP_04067612.1| hypothetical protein bthur0014_46480 [Bacillus thuringiensis IBL
4222]
gi|228910822|ref|ZP_04074631.1| hypothetical protein bthur0013_49640 [Bacillus thuringiensis IBL
200]
gi|228968100|ref|ZP_04129105.1| hypothetical protein bthur0004_48850 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|229020220|ref|ZP_04176992.1| hypothetical protein bcere0030_47110 [Bacillus cereus AH1273]
gi|229026446|ref|ZP_04182803.1| hypothetical protein bcere0029_47230 [Bacillus cereus AH1272]
gi|229032621|ref|ZP_04188585.1| hypothetical protein bcere0028_46580 [Bacillus cereus AH1271]
gi|229175679|ref|ZP_04303187.1| hypothetical protein bcere0006_47560 [Bacillus cereus MM3]
gi|74491799|gb|EAO54991.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218540705|gb|ACK93099.1| FeS assembly protein SufD [Bacillus cereus G9842]
gi|228607820|gb|EEK65134.1| hypothetical protein bcere0006_47560 [Bacillus cereus MM3]
gi|228728706|gb|EEL79718.1| hypothetical protein bcere0028_46580 [Bacillus cereus AH1271]
gi|228734909|gb|EEL85547.1| hypothetical protein bcere0029_47230 [Bacillus cereus AH1272]
gi|228741060|gb|EEL91286.1| hypothetical protein bcere0030_47110 [Bacillus cereus AH1273]
gi|228791591|gb|EEM39188.1| hypothetical protein bthur0004_48850 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228848773|gb|EEM93618.1| hypothetical protein bthur0013_49640 [Bacillus thuringiensis IBL
200]
gi|228856172|gb|EEN00707.1| hypothetical protein bthur0014_46480 [Bacillus thuringiensis IBL
4222]
Length = 430
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +L++KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELLQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229087497|ref|ZP_04219630.1| hypothetical protein bcere0022_40620 [Bacillus cereus Rock3-44]
gi|228695821|gb|EEL48673.1| hypothetical protein bcere0022_40620 [Bacillus cereus Rock3-44]
Length = 430
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +L++KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELLQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGIV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|196032815|ref|ZP_03100228.1| FeS assembly protein SufD [Bacillus cereus W]
gi|218906175|ref|YP_002454009.1| FeS assembly protein SufD [Bacillus cereus AH820]
gi|228930005|ref|ZP_04093016.1| hypothetical protein bthur0010_46870 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936279|ref|ZP_04099078.1| hypothetical protein bthur0009_47170 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948707|ref|ZP_04110985.1| hypothetical protein bthur0007_48310 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124517|ref|ZP_04253702.1| hypothetical protein bcere0016_48010 [Bacillus cereus 95/8201]
gi|195994244|gb|EDX58199.1| FeS assembly protein SufD [Bacillus cereus W]
gi|218536140|gb|ACK88538.1| FeS assembly protein SufD [Bacillus cereus AH820]
gi|228658857|gb|EEL14512.1| hypothetical protein bcere0016_48010 [Bacillus cereus 95/8201]
gi|228811014|gb|EEM57357.1| hypothetical protein bthur0007_48310 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228823395|gb|EEM69228.1| hypothetical protein bthur0009_47170 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829685|gb|EEM75311.1| hypothetical protein bthur0010_46870 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 430
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGTV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229193263|ref|ZP_04320214.1| hypothetical protein bcere0002_49100 [Bacillus cereus ATCC 10876]
gi|228590240|gb|EEK48108.1| hypothetical protein bcere0002_49100 [Bacillus cereus ATCC 10876]
Length = 430
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+F+Y+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFIYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPIQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|228999757|ref|ZP_04159331.1| hypothetical protein bmyco0003_43100 [Bacillus mycoides Rock3-17]
gi|228759964|gb|EEM08936.1| hypothetical protein bmyco0003_43100 [Bacillus mycoides Rock3-17]
Length = 430
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 100/453 (22%), Positives = 188/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDFIGKGHTAK---QE 65
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 66 PVSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +L++KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELIQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSSATYVENYVAN-ETVTGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIEWALGLMNDGNTISENVTNLMGDGSFA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGFILKHGVQTDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP++ A L
Sbjct: 340 QQSSRVLMLNEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKKEAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|228961228|ref|ZP_04122848.1| hypothetical protein bthur0005_46760 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798434|gb|EEM45427.1| hypothetical protein bthur0005_46760 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 430
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKSDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|295401409|ref|ZP_06811380.1| FeS assembly protein SufD [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109634|ref|YP_003987950.1| FeS assembly protein SufD [Geobacillus sp. Y4.1MC1]
gi|294976624|gb|EFG52231.1| FeS assembly protein SufD [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214735|gb|ADP73339.1| FeS assembly protein SufD [Geobacillus sp. Y4.1MC1]
Length = 437
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 105/453 (23%), Positives = 189/453 (41%), Gaps = 28/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ +R S + EPDW+L+ RL A + + P + + +F + ++
Sbjct: 10 DQQYVRSFSGGRGEPDWLLQLRLQALAKAEELPLPKPDKTKIDNWNFTQFANHIVERAP- 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L + L + D E+LK G
Sbjct: 69 ---------------FASLDELPETVKALIEAGEGTKNLYVQRDHTPAFLALSEDLKAKG 113
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH DL++KYL V + ++ AL++A+F G FVY+PKGV + L
Sbjct: 114 VIFTDIFTAAREHGDLLQKYLLKDGVKIDEHRLTALHAALFNGGVFVYVPKGVEVDVPLQ 173
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ T F +++A++ S V Y+E + + + V E+ A NA + ++
Sbjct: 174 AVYIQESDDTALFNHVIVVAEDNSRVVYVENYISAKETSKAVVNIVAEVFANTNARVFFA 233
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V N G + +V +RG G +I W T L G+ S G
Sbjct: 234 AVDNLAKG-------VTTYVNRRGIA-GRDGRIEWALGLMNDGDTISENITRLIGDGSFG 285
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q + T ++H K+T I+ G+ + + + G + GA+ S
Sbjct: 286 DTKTVVVGRGEQVQNFTTSVVHYGKHTEGYILKHGVVRDSATSIFNGIGKIEHGASKSNA 345
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 346 QQESRVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDPTQLYYLMSRGIPKREAERL 405
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
I++GF+ V++ +P+E ++LI++ +E V
Sbjct: 406 IIHGFLAPVVEAIPIESVK--KQLIEV-IERKV 435
>gi|229163960|ref|ZP_04291900.1| hypothetical protein bcere0009_47230 [Bacillus cereus R309803]
gi|228619581|gb|EEK76467.1| hypothetical protein bcere0009_47230 [Bacillus cereus R309803]
Length = 430
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 188/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-EKAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGTV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|228942150|ref|ZP_04104690.1| hypothetical protein bthur0008_47810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975079|ref|ZP_04135638.1| hypothetical protein bthur0003_48270 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981719|ref|ZP_04142014.1| hypothetical protein bthur0002_48780 [Bacillus thuringiensis Bt407]
gi|228777831|gb|EEM26103.1| hypothetical protein bthur0002_48780 [Bacillus thuringiensis Bt407]
gi|228784600|gb|EEM32620.1| hypothetical protein bthur0003_48270 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817484|gb|EEM63569.1| hypothetical protein bthur0008_47810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326942801|gb|AEA18697.1| ABC transporter-associated protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 430
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 188/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKDKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +L++KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELLQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229062650|ref|ZP_04199959.1| hypothetical protein bcere0026_47160 [Bacillus cereus AH603]
gi|228716620|gb|EEL68317.1| hypothetical protein bcere0026_47160 [Bacillus cereus AH603]
Length = 430
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRAGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGTV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSFA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPYQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|229094086|ref|ZP_04225170.1| hypothetical protein bcere0021_48010 [Bacillus cereus Rock3-42]
gi|228689298|gb|EEL43117.1| hypothetical protein bcere0021_48010 [Bacillus cereus Rock3-42]
Length = 430
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRIGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|30265021|ref|NP_847398.1| hypothetical protein BA_5216 [Bacillus anthracis str. Ames]
gi|47530522|ref|YP_021871.1| hypothetical protein GBAA_5216 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187840|ref|YP_031093.1| hypothetical protein BAS4850 [Bacillus anthracis str. Sterne]
gi|65316973|ref|ZP_00389932.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bacillus anthracis str.
A2012]
gi|165870812|ref|ZP_02215464.1| FeS assembly protein SufD [Bacillus anthracis str. A0488]
gi|167639981|ref|ZP_02398249.1| FeS assembly protein SufD [Bacillus anthracis str. A0193]
gi|170685896|ref|ZP_02877119.1| FeS assembly protein SufD [Bacillus anthracis str. A0465]
gi|170706923|ref|ZP_02897380.1| FeS assembly protein SufD [Bacillus anthracis str. A0389]
gi|177652250|ref|ZP_02934753.1| FeS assembly protein SufD [Bacillus anthracis str. A0174]
gi|190567300|ref|ZP_03020215.1| FeS assembly protein SufD [Bacillus anthracis Tsiankovskii-I]
gi|227817753|ref|YP_002817762.1| FeS assembly protein SufD [Bacillus anthracis str. CDC 684]
gi|229602920|ref|YP_002869223.1| FeS assembly protein SufD [Bacillus anthracis str. A0248]
gi|254687314|ref|ZP_05151171.1| FeS assembly protein SufD [Bacillus anthracis str. CNEVA-9066]
gi|254735349|ref|ZP_05193057.1| FeS assembly protein SufD [Bacillus anthracis str. Western North
America USA6153]
gi|254753122|ref|ZP_05205158.1| FeS assembly protein SufD [Bacillus anthracis str. Vollum]
gi|254761464|ref|ZP_05213485.1| FeS assembly protein SufD [Bacillus anthracis str. Australia 94]
gi|30259698|gb|AAP28884.1| FeS assembly protein SufD [Bacillus anthracis str. Ames]
gi|47505670|gb|AAT34346.1| FeS assembly protein SufD [Bacillus anthracis str. 'Ames Ancestor']
gi|49181767|gb|AAT57143.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164713321|gb|EDR18846.1| FeS assembly protein SufD [Bacillus anthracis str. A0488]
gi|167512062|gb|EDR87440.1| FeS assembly protein SufD [Bacillus anthracis str. A0193]
gi|170128026|gb|EDS96896.1| FeS assembly protein SufD [Bacillus anthracis str. A0389]
gi|170670360|gb|EDT21100.1| FeS assembly protein SufD [Bacillus anthracis str. A0465]
gi|172082256|gb|EDT67322.1| FeS assembly protein SufD [Bacillus anthracis str. A0174]
gi|190561804|gb|EDV15774.1| FeS assembly protein SufD [Bacillus anthracis Tsiankovskii-I]
gi|227006322|gb|ACP16065.1| FeS assembly protein SufD [Bacillus anthracis str. CDC 684]
gi|229267328|gb|ACQ48965.1| FeS assembly protein SufD [Bacillus anthracis str. A0248]
Length = 430
Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDASPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|46199791|ref|YP_005458.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55981809|ref|YP_145106.1| SufD protein membrane protein [Thermus thermophilus HB8]
gi|46197418|gb|AAS81831.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|55773222|dbj|BAD71663.1| SufD protein (membrane protein) [Thermus thermophilus HB8]
Length = 431
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 108/453 (23%), Positives = 193/453 (42%), Gaps = 27/453 (5%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L++ + +S EP W+LE RL A + + PS + + DL
Sbjct: 4 LDKTQVEAVSKALGEPAWLLEKRLKALEAFARLPYPS---KKDENWRYTDLS-------- 52
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
P L P+ LR + +P + L S V D V E LK+
Sbjct: 53 EAPLELPVEAPKGLR-LSRDDLPEPVKRRLERTDVSGFLVFVGPD--LVYAEVPEALKEK 109
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G++F ++EA+ HPD V+ L V ++ +AA NSA FT G+F+Y+P G+ L
Sbjct: 110 GLVFTSLAEALKTHPDKVEAALFQAV-YTEDKFAAQNSAFFTHGAFLYVPAGLEVEKPLG 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + E R+L+ ++ + +Y+E LH + E+V A ++++
Sbjct: 169 VFKVLLEGEKASAGRSLLFLEDNAKAAYIEEYL-SLDLPPTLHLSATEMVLRPGARLRHA 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
VQ + G +++F +R S ++ + G A + L G +
Sbjct: 228 HVQTFGEG-------VWHFHRQRAL-LERDSGLNDLVVNLGGAYARSEVASELVGPGAES 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E + +G QQ D T H+ +T S ++ KG + + G + + +GA +
Sbjct: 280 EMLGLYFGHGRQQFDHYTLQHHVEHHTRSDLLYKGAVKDEARAVFSGLIRLEKGAQKTDA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ +LL+ +IP +E + H +TT+ + + LFY RG+P A L
Sbjct: 340 YQANRNLLLSPTARVDSIPQLEIGANDVRCTHGSTTAPVDEMQLFYLQSRGLPRGLAQEL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+V + +VL ++P++ + I+ +E V
Sbjct: 400 LVKAHLADVLSRIPLKA---LRAHIEAVIEEKV 429
>gi|289551294|ref|YP_003472198.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
lugdunensis HKU09-01]
gi|289180826|gb|ADC88071.1| Iron-sulfur cluster assembly protein SufD [Staphylococcus
lugdunensis HKU09-01]
Length = 435
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 95/451 (21%), Positives = 191/451 (42%), Gaps = 29/451 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKS 94
++E+ + S +EP WM + R A + T++ P + + DFD ++ +
Sbjct: 8 ISEEQLVDYSKALHEPSWMTDSRKKALKLTETLEMPKPDKTKLRKWDFDSFQQHHVDGAT 67
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
L + +++ + I+ LA T ++ K+
Sbjct: 68 FKDLSELPESINKIINVETSENLIIQHNNTLA------------------YTQVSDQAKQ 109
Query: 155 SGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
GVI +SE++ H DLV+KYL T V V ++ AL++A+ G FVY+PK V
Sbjct: 110 DGVIIEGLSESLVNHGDLVQKYLMTEAVQVDEHRLTALHAALINGGVFVYVPKNVVVEHP 169
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ ++ F +++ +E + V+Y+E + + + E++A N+ I
Sbjct: 170 IHYVVLHDDDKASFFNHVILVTEESAEVTYVENYVSDASGDGNQINIISEVIAGANSSIT 229
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +V G ++ +RG + I+W + L G++S
Sbjct: 230 YGSVDYLDKG-------FTGYIIRRGHTEAD-ASINWALGLMNEGSQIIDNTTNLVGDRS 281
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E S+ + G Q+I+ +K++ K T I+ G+ +++ + G + G S
Sbjct: 282 TSELKSVVVGTGDQKINLTSKIVQYGKETNGYILKHGVMKEHASSVFNGIGHIKHGGTKS 341
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ + P + H A+ ++ E L+Y + RGI + A
Sbjct: 342 IANQESRVLMLSEHSRGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISQHEAE 401
Query: 454 ALIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
L+++GF+ V+++LP+E + + +I++
Sbjct: 402 RLVIHGFLDPVVRELPIEDVKRQLRDVIELK 432
>gi|229181281|ref|ZP_04308611.1| hypothetical protein bcere0005_46230 [Bacillus cereus 172560W]
gi|228602174|gb|EEK59665.1| hypothetical protein bcere0005_46230 [Bacillus cereus 172560W]
Length = 430
Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIDKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELTEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V V ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDANPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|167634936|ref|ZP_02393254.1| FeS assembly protein SufD [Bacillus anthracis str. A0442]
gi|254740616|ref|ZP_05198307.1| FeS assembly protein SufD [Bacillus anthracis str. Kruger B]
gi|167529686|gb|EDR92435.1| FeS assembly protein SufD [Bacillus anthracis str. A0442]
Length = 430
Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 189/453 (41%), Gaps = 33/453 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ IR +++ NE W+ E+RL A + + P+ + + DF + A K
Sbjct: 9 DQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDF--IGKGDAAKQEP 66
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
SL ++ + + +V + + +E K+ G
Sbjct: 67 -VSSLTELPEAVKNLID-----------------ENNSVLVQRTGTTAFVSLADEAKEKG 108
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF I A EH +LV+KYL V + ++ AL++A+ G+FVY+PK V L
Sbjct: 109 VIFTDIVTAATEHAELVQKYLMKDGVKIDEHRLTALHAALINGGAFVYVPKNVVLETPLQ 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F ++ + + L +AD S +Y+E A + + V E++ A++K+
Sbjct: 169 AVFLVDGEEANVYNHVLFVADANSTATYVENYVAN-ENAKGIANIVAEVIVEQGAQVKFG 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + +V +RG G +I W T L G+ S
Sbjct: 228 AVDLLAKD-------VTTYVNRRGVV-GRDGRIDWALGLMNDGNTISENVTNLMGDGSYA 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ I G Q + TK++H K++ I+ G+ + + + G + GA+ S
Sbjct: 280 DTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ L+Y + RGIP+ A L
Sbjct: 340 QQSSRVLMLDEKARGDASPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+++GF+ V+ +LP+E +L+++ +E V
Sbjct: 400 VIHGFLAPVVNELPIEGVK--AQLVEV-IERKV 429
>gi|212223679|ref|YP_002306915.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus onnurineus NA1]
gi|212008636|gb|ACJ16018.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermococcus onnurineus NA1]
Length = 445
Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats.
Identities = 127/453 (28%), Positives = 209/453 (46%), Gaps = 33/453 (7%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP-- 98
I ++ + EP+WM R + A P I D+L + A I G
Sbjct: 17 IENLARRNKEPEWMTRIRYKGLEAFEK------APHNDPVISKDELLRFIAKPEIEGLPE 70
Query: 99 --QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+SLDD+ PE+ ++LGI EQ+ +AG+ D+ + F +E K G
Sbjct: 71 HIESLDDLPPEMKALLDRLGISEVEQKYIAGLA-------VQTDTGIIYNQFLQEWAKKG 123
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
+I +P+ EA+ ++PD+VK++ + V ++ AA ++AV+ G F+Y+ +G++ P L
Sbjct: 124 LIVLPMEEAVKKYPDVVKRHFLQMFSVNESKMAAYHTAVWNGGIFLYVKEGLKVPFPLHL 183
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+F I E Q +IIA+ + +EGCTAP + LH + E D A+++ +
Sbjct: 184 FFLIQESALAQAPHIIIIAERNTEFHLIEGCTAPVLVRHSLHLDMTEAYIHDGAKVQLTV 243
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCR---GMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+QNW +V R R G ++ T + G+ + E
Sbjct: 244 LQNWPE-----------YVHTRPMTRARIGKNARFINTTVGLGTGRSNIANPKYWVEENG 292
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E I + +D G +M + SK + S RG + A +
Sbjct: 293 YVELNGIILGQKDWYVDLGGEMYLQGREAAGINASKAVIMDESTVITRG--KIVAEAPRT 350
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ CD+LL+ + T P + S+ L HEA KI +E LFY + RG+ EE A
Sbjct: 351 KGHISCDALLMSDKAVMETYPGLVSRVDDAELSHEAAIGKIREEELFYLMSRGLSEEKAT 410
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
LIV GF+ +L+ +PMEF VE +K+I++++ G
Sbjct: 411 QLIVKGFLEPMLKDIPMEFLVEIRKIIELAVSG 443
>gi|325109893|ref|YP_004270961.1| Iron-regulated ABC transporter permease SufD [Planctomyces
brasiliensis DSM 5305]
gi|324970161|gb|ADY60939.1| Iron-regulated ABC transporter permease protein SufD [Planctomyces
brasiliensis DSM 5305]
Length = 442
Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats.
Identities = 102/454 (22%), Positives = 192/454 (42%), Gaps = 27/454 (5%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
E+ A +NEP W+ E R A+R + + + +D
Sbjct: 12 TEEGFEAFLATRNEPAWLTERRREAFRLYQELSSQELDPEEFRRLDL------------- 58
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ D + + E + + + + EEL G
Sbjct: 59 --RLFRPTDYAISGSVESASAAANRFSTTMSERDEFGGHLVHINGYTTRSELAEELASQG 116
Query: 157 VIFMPISEAICEHPDLVKKYL-STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VI+ ++EA+ +H +LV++YL + V G + ++A ++A +T G+F+Y+P+ V L
Sbjct: 117 VIYCSLAEAVEQHAELVQEYLLTKAVQPGTDRFSAWHAAFWTGGAFLYVPRNVEISKPLH 176
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + E G TLI+ ++ + + LE + LH VEL+ A+++Y
Sbjct: 177 SLIGLAEAGAADCSHTLIVVEDNANATMLEETLSADDSIAGLHLGAVELLVGQGAQLRYV 236
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+QNW +++F + G + WT GS + LL G + G
Sbjct: 237 QLQNWNE-------RVFHFAHQCGRV-AKDGSLQWTVGALGSKFAHVHQDVLLDGAGADG 288
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A + Q++ T+ H A NT S ++ K + + +RG + V + A +
Sbjct: 289 QVNGVAFATDRQKLSFYTRQAHKAPNTHSDLLYKEVVRDRARMIWRGMIDVDKIAQLTDG 348
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ + DSL++ + IP +E + H AT + ++ + YC+ RGI + A+ L
Sbjct: 349 YQRNDSLILSRDARVDAIPGLEIEADDVRCTHGATAGMVDEDQVLYCMSRGISRKEAMHL 408
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
IV GF +V ++ +E E + S++ +G
Sbjct: 409 IVEGFFAQVFDRIQVEAVRET---LSQSVQEKLG 439
>gi|291295169|ref|YP_003506567.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
gi|290470128|gb|ADD27547.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
Length = 444
Score = 296 bits (757), Expect = 6e-78, Method: Composition-based stats.
Identities = 116/464 (25%), Positives = 209/464 (45%), Gaps = 39/464 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ D++ +S K NEP W+ RL A+ ++ + P+ R + D+
Sbjct: 7 LSRDLVLEVSKKLNEPQWLQTKRLEAWETFVKLPYPT---TRTEEWKYTDIT-------- 55
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+++ EL + IP Q+ LA Q S AV D V EE ++
Sbjct: 56 --EVPFEELPLELPKGGAS-EIPQAVQDRLAQAQLSGYAVFVGAD--LVHVELPEEYRQQ 110
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA-----------LNSAVFTDGSFVYI 204
GVIF + +AI +HP+LV+ L V D LN+A+FT G F+YI
Sbjct: 111 GVIFTSLHQAIAQHPELVEANLFKAVNWHDLVGTQKNRPENSKIPALNAALFTHGVFLYI 170
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
PK V + F+ E G RTLI+ D S Y+E +P R ++ + E+
Sbjct: 171 PKNVEFSKPIGV-FKYLEGGRLSGSRTLIVGDVNSQAVYIEEYISPARVAPSVNTSSTEI 229
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ A+++++ +Q G Y+F +R + + ++ + G++I+
Sbjct: 230 IVGPGAKVRHAHIQLLGQG-------FYHFHRQRAHLQ-RDAALNDLVVNMGASISRAEV 281
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ G S E + + G + +D T H+A + S ++ KG + S Y G +
Sbjct: 282 QSEMLGPGSSSEMLGLYFTTGQEHVDHYTLQHHVADHAYSDVLYKGAAKDQSRTVYAGLI 341
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
V +GA + + +LL+ + + ++P +E + H ++T+ ++ E LFY +
Sbjct: 342 KVEQGAQKTDAYQTNRNLLLSEDARSDSVPQLEIGANDVKCSHGSSTAPVAPEELFYLMS 401
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
RG+P A ++V G + +VL ++P+E ++ I+ +E V
Sbjct: 402 RGLPRHMAQQILVKGHMTDVLTRIPIEP---LRQYIESIIEEKV 442
>gi|56964741|ref|YP_176472.1| ABC transporter [Bacillus clausii KSM-K16]
gi|56910984|dbj|BAD65511.1| ABC transporter [Bacillus clausii KSM-K16]
Length = 436
Score = 296 bits (757), Expect = 7e-78, Method: Composition-based stats.
Identities = 93/450 (20%), Positives = 182/450 (40%), Gaps = 27/450 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
+ D ++ S K EP W+ + RL A + +++ P + + DF
Sbjct: 9 IGPDKLKERSEGKQEPKWLTDLRLDALNKVESLELPKPDKTKIHNWDFTSFTQELR--EP 66
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
SLD++ ++ + + + ++ + ++ T EL +
Sbjct: 67 KEISSLDELSSDI--------------QQFVDEEATGNSLLIQDNGKTIFQTNAAELAEK 112
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV+F + A+ EH DLVKKYL T V +N A+++A+ G+F+Y+PK V + L
Sbjct: 113 GVVFCDFATAVKEHGDLVKKYLLTEAVSADENKLTAMHAALMEGGAFIYVPKNVNVEVPL 172
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ ++++ G F LI+A++ S V+Y+E T + V E+ A + +
Sbjct: 173 QAVYAVSDEKAGLFNHVLIVAEDNSSVTYVENYTGYG-SGASVANLVAEVYVGAGARVSF 231
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V +V +R +I W + T L G+ S
Sbjct: 232 GGVDTLNEDA-------TTYVVRRAHV-ERDGRIDWALGQMNDGDTVAENITYLVGDGSY 283
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +++ G Q+ + T + H K++ I+ G+ + + G + + A +
Sbjct: 284 ADAKLVSVGTGEQKQNFTTLIKHYGKHSEGYILKHGVMTERALGIFNGISKIEKAATKAH 343
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
L++G P + H A+ +I +FY + RGI A
Sbjct: 344 GEQTERILMLGERARGDANPILLIDEDDVTAGHAASVGRIDPLQMFYLMSRGISRAEAER 403
Query: 455 LIVNGFVREVLQKLPMEFAV-EAQKLIDIS 483
L+++GF+ V+ +LP+ + + +I+
Sbjct: 404 LVIHGFLEPVVSQLPVASVRKQMKTVIERK 433
>gi|254168190|ref|ZP_04875037.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
gi|197622956|gb|EDY35524.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
Length = 441
Score = 295 bits (756), Expect = 8e-78, Method: Composition-based stats.
Identities = 122/451 (27%), Positives = 199/451 (44%), Gaps = 27/451 (5%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
ED I + + EP+WM + R A + I D L Y A +
Sbjct: 14 EDQIEKLKKRNKEPEWMTKLRYKAMDAFFEAP-------HNDPIIKDPLDYIAKTEGEKY 66
Query: 98 P--QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
P +SLDD+ P++L ++LGI E++ +AG+ D+ V+ F +E +K
Sbjct: 67 PEVKSLDDLPPDMLALLDRLGIAEVEKKYIAGLAVQS-------DTSIVLNDFLKEWRKK 119
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G+I + +A+ HP ++K ++ AA ++AV+ G F+++ +G++ PM L
Sbjct: 120 GLIVESMEDAVRNHP-ILKDLFLKQFNPYESKLAAYHTAVWNGGIFLHVSEGLKVPMPLH 178
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+F I Q +I A+ S + +EGCT+P + LH + E D A +K S
Sbjct: 179 LFFLIQNSAMAQAPHIIINAEPNSEIHLIEGCTSPVLVRHSLHLDMTEAYIGDGANVKLS 238
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+QNW ++ R I+ T P E
Sbjct: 239 VLQNWPEY-------VHTRPMTRARIGKNAEFINTTVGLGTGKSNIANPK-YWVDEGGYV 290
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E I + +D G +M A SK + S+ RG + A ++
Sbjct: 291 ELNGIILGQKDFYVDLGGEMNLDAPGARGLNASKSVIMDKSSVITRGI--IRANAPRTKG 348
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
CD+L++ + T P + S+ L HEA KI +E LFY + RG+ EE A L
Sbjct: 349 HISCDALILNSEARMETYPGLVSQVDDAELSHEAAIGKIREEELFYLMSRGLKEEEATQL 408
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
IV GFV +L+ +PMEF +E +K+I++++ G
Sbjct: 409 IVKGFVNPLLKDIPMEFVIEIRKIIEMAVSG 439
>gi|332159607|ref|YP_004424886.1| hypothetical protein PNA2_1968 [Pyrococcus sp. NA2]
gi|331035070|gb|AEC52882.1| hypothetical protein PNA2_1968 [Pyrococcus sp. NA2]
Length = 446
Score = 295 bits (756), Expect = 8e-78, Method: Composition-based stats.
Identities = 124/453 (27%), Positives = 204/453 (45%), Gaps = 27/453 (5%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV- 96
E+ I ++ + EP+WM R A ++ A I P ID L + A I
Sbjct: 15 ENQIEELAKRNKEPEWMTRIRYKALEDFMK------APINDPIIDEQTLLNFIAKPEIEG 68
Query: 97 ---GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+SL+D+ PE+ ++LGI EQ+ +AG+ D+ + F +E
Sbjct: 69 IPEKIESLEDLPPEMKELLDRLGINEVEQKYIAGLA-------VQTDTGVIYNQFLQEWA 121
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
+ G+I +P EA+ +PD+VK++ + G+N A ++A++ G F+Y+ + ++ P
Sbjct: 122 RKGLIVLPTEEAVNRYPDIVKRHFLKLFNSGENKLTAYHTAIWNGGIFLYVKENLKVPFP 181
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
L +F I E Q +IIA++ S V +EGCTAP + LH + E +NA+++
Sbjct: 182 LHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYVHENAKVR 241
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+ +QNW ++ R + ++ T P +
Sbjct: 242 LTVLQNWPEY-------VHTRPMTRAEIGEGGEFLNTTVSLGAGKSNIANPK-YWVKKNG 293
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E + + ID G +M L SK + + RGK+
Sbjct: 294 YVELNGVILGQKDWYIDLGGEMYLLDTGARGMNASKAVIMDEATVITRGKIIAKAKKTK- 352
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
CD+LL+ N T P + S L HEA KI +E LFY + RG+ EE A
Sbjct: 353 -GHISCDALLLSNKARMETYPGLVSLVDDAELSHEAAIGKIREEELFYLMSRGLSEEKAT 411
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
LIV GFV +L+ +P+EF VE +K+I++++ G
Sbjct: 412 QLIVKGFVEPMLKDIPVEFLVEIRKIIELAVSG 444
>gi|320161198|ref|YP_004174422.1| putative protein SufD [Anaerolinea thermophila UNI-1]
gi|319995051|dbj|BAJ63822.1| putative protein SufD [Anaerolinea thermophila UNI-1]
Length = 457
Score = 295 bits (756), Expect = 8e-78, Method: Composition-based stats.
Identities = 117/440 (26%), Positives = 183/440 (41%), Gaps = 35/440 (7%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
PD ++ +R A++ + T PS W R + DL+ + D
Sbjct: 38 PD-LIAYRKEAWQNFQTFPMPSVQEEAWRRTDIRGLK-ADLFRLPREQEYKDLTPPPDEL 95
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
+ L E G E +L G EELKK GVIF A
Sbjct: 96 LQPLADGEHGG----EIVLLPGKA---------------QVQLDEELKKQGVIFTDYQSA 136
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ E+P LV K L V D +AAL A+ G F+Y+P+ V L + G
Sbjct: 137 LREYPSLVTKILGKAVRTSDGKFAALAGALAHTGVFLYVPRNVHLKTPLHSLLWGPGTGL 196
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
L+ +EG+ +Y+ +P E LHA +VEL + A++ + +Q+W
Sbjct: 197 AYISHFLVYLEEGASATYVHEFASPTEMEQALHAGIVELYVGNGAQLTFVELQSWGE--- 253
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
++NF +R + W GS +T + L GE S G+ ++
Sbjct: 254 ----HVWNFTHERALV-DRDGHLDWIFGAIGSHLTKNFSEIDLVGEGSTGKMSGFYFTDH 308
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q +D T+ HLA +TTS ++ KG S + ++G + V GA + + +L++
Sbjct: 309 DQHLDHDTQQNHLAPHTTSDLLFKGALIQESRSVWQGMIYVAPGAQKTDGYQANRNLVLS 368
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A +IP +E H AT KI +E +FY + RGI A LIV GF ++
Sbjct: 369 PKARADSIPGLEILADDVRCTHGATVGKIDEEQIFYLMARGISRPLAERLIVEGFFDPIM 428
Query: 466 QKLPMEFAV-EAQKLIDISL 484
Q++P E Q+ I +
Sbjct: 429 QRIPFEGVRQRFQRTIAEKM 448
>gi|226314442|ref|YP_002774338.1| iron-sulfur cluster assembly protein SufD [Brevibacillus brevis
NBRC 100599]
gi|226097392|dbj|BAH45834.1| iron-sulfur cluster assembly protein SufD [Brevibacillus brevis
NBRC 100599]
Length = 432
Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 188/453 (41%), Gaps = 30/453 (6%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + I S EP W LE RL + + P+ + + + D + +
Sbjct: 10 DSEAITQYSKANQEPAWFLEKRLAGLKAAGELALPALEKTKIDKWNTVDFDPFQTTTKVA 69
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L D+ + + +++ ++ +V +ELK G
Sbjct: 70 AANELSDLVKAQIDVDSVKNLLVQK------------------NASTVFQAVSDELKAQG 111
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF ++A+ H DLV+KYL V+ + ++ AL++AV G F+Y+PK V + L
Sbjct: 112 VIFTTFADALQTHGDLVQKYLLNVIALDEHKLTALHTAVVNGGVFLYVPKNVEVDVPLQA 171
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ I LI+A+ S V+Y+ ++ + ++VE+ A ++ ++
Sbjct: 172 VYEIAGDNALLAPHVLIVAEANSKVTYV-DTYVSGEGKSMVANSLVEVYVGAGASVQVAS 230
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V++ R K+ W E T + +L+G S E
Sbjct: 231 VRSLSVDVHDYSF--------RRATVERDGKMEWILGEMNDGNTVANNTTILKGTASIAE 282
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
SI++ G Q+ + +++ H+ +T S +VSK + + + G + +GA +
Sbjct: 283 TKSISVGTGSQRQNLTSQVQHIGTHTESDMVSKAVMTDEAVSILNGITKIEKGAEKANGV 342
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ + P + H A+ + S+E +FY + RGI + A LI
Sbjct: 343 QAENILMLSDKSRGDANPILLIDEDDVKAGHAASVGRFSEESIFYLMSRGISRQGAERLI 402
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ GF+ V+ ++P+E E + + +LE +G
Sbjct: 403 ILGFLEPVVAEIPVE---EVKNRLRQALERKLG 432
>gi|293553784|ref|ZP_06674401.1| FeS assembly protein SufD [Enterococcus faecium E1039]
gi|291602077|gb|EFF32312.1| FeS assembly protein SufD [Enterococcus faecium E1039]
Length = 428
Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats.
Identities = 107/452 (23%), Positives = 182/452 (40%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D + S K EPDWM +R A + + P R+++ D+
Sbjct: 11 DAVNDFSLSKGEPDWMRTFRQDALAKADELPLPHIDRVKFHRWSLFDVK----------- 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E E IP A V S ++ EL + GVI
Sbjct: 60 --------ETQTISETGTIP-------AFDAMKDNPVLVQQSSWTIFEQLPVELAEKGVI 104
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E+P+LV++Y V + ++ AL+ A G F+Y+PK V L +
Sbjct: 105 FTDLFTAMIEYPELVQEYYMKKAVNMNEDQLTALHVAFMNSGIFLYVPKNVVIDEPLESL 164
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F + F+ LI+ADE S SYLE + + +VE++A ++IKYS
Sbjct: 165 FIQDGASDEHFFKHVLIVADEHSEFSYLERFQTTKEQVAKSSGNIIVEVIAKAGSKIKYS 224
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
TV I +++ +RG + + W L GE +
Sbjct: 225 TVDQLGE-------NITSYMNRRGHIL-RDASVDWAIGVMNDGHVIADFDSDLAGEGAHA 276
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E +AIS+G Q T++ + A +T I+ G+ T+ G + +GA +
Sbjct: 277 EVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGTLTFNGIGHILKGAKGADA 336
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 337 QQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLHKEEAERL 396
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISLEG 486
++ GF+ VL +P+E E ++I+ L G
Sbjct: 397 VIRGFLGSVLTAIPVEQVRKELVEVIEGKLNG 428
>gi|254168067|ref|ZP_04874915.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
gi|289596013|ref|YP_003482709.1| SufBD protein [Aciduliprofundum boonei T469]
gi|197623110|gb|EDY35677.1| sufB/sufD domain protein [Aciduliprofundum boonei T469]
gi|289533800|gb|ADD08147.1| SufBD protein [Aciduliprofundum boonei T469]
Length = 441
Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats.
Identities = 122/451 (27%), Positives = 200/451 (44%), Gaps = 27/451 (5%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI-- 95
ED I + + EP+WM + R A + A P I D L Y A +
Sbjct: 14 EDQIEKLKKRNKEPEWMTKLRYKAMDAFFE------APHNDPVIK-DPLDYIAKTEEEMY 66
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+SLD++ P++L ++LGI E++ +AG+ D+ V+ F +E +K
Sbjct: 67 PEVKSLDELPPDMLALLDRLGIAEVEKKYIAGLAVQS-------DTSIVLNDFLKEWRKK 119
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G+I + +A+ HP ++K ++ AA ++AV+ G F+++ +G++ PM L
Sbjct: 120 GLIVESMEDAVRNHP-ILKDLFLKQFNPYESKLAAYHTAVWNGGIFLHVAQGLKVPMPLH 178
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+F I Q +I A+ S + +EGCT+P + LH + E D A +K S
Sbjct: 179 LFFLIQNSAMAQAPHIIINAEPNSEIHLIEGCTSPVLVRHSLHLDMTEAYIGDGANVKLS 238
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+QNW ++ R I+ T P E
Sbjct: 239 VLQNWPEY-------VHTRPMTRARIGKNAEFINTTVGLGTGKSNIANPK-YWVDEGGYV 290
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E I + +D G +M A SK + S+ RG + A ++
Sbjct: 291 ELNGIILGQKDFYVDLGGEMNLDASGARGLNASKSVIMDRSSVITRGI--IRANAPKTKG 348
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
CD+L++ + T P + S+ L HEA KI +E LFY + RG+ EE A L
Sbjct: 349 HISCDALILNSEARMETYPGLVSQVDDAELSHEAAIGKIREEELFYLMSRGLKEEEATQL 408
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
IV GFV +L+ +PMEF +E +K+I++++ G
Sbjct: 409 IVKGFVNPLLKDIPMEFVIEIRKIIEMAVSG 439
>gi|82777162|ref|YP_403511.1| hypothetical protein SDY_1914 [Shigella dysenteriae Sd197]
gi|309788334|ref|ZP_07682938.1| sufB domain protein [Shigella dysenteriae 1617]
gi|81241310|gb|ABB62020.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923716|gb|EFP69219.1| sufB domain protein [Shigella dysenteriae 1617]
Length = 255
Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats.
Identities = 171/256 (66%), Positives = 207/256 (80%), Gaps = 1/256 (0%)
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ADE SYVSY+EGC+AP RD QLHAAVVE+ NAE+KYSTVQNW+PGD+ GGI N
Sbjct: 1 MADEDSYVSYIEGCSAPVRDSYQLHAAVVEVTIHKNAEVKYSTVQNWFPGDNN-TGGILN 59
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
FVTK C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G QQ D+GT
Sbjct: 60 FVTKCALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGT 119
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG NCGAHT
Sbjct: 120 KMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTF 179
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PY+E +N+S LEHEATTS+I ++ LFYCLQRG EE AI++IVNGF ++V +LP+EFA
Sbjct: 180 PYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGSSEEDAISMIVNGFCKDVFSELPLEFA 239
Query: 474 VEAQKLIDISLEGSVG 489
VEAQKL+ ISLE SVG
Sbjct: 240 VEAQKLLAISLEHSVG 255
>gi|257883796|ref|ZP_05663449.1| FeS assembly protein SufD [Enterococcus faecium 1,231,501]
gi|257819634|gb|EEV46782.1| FeS assembly protein SufD [Enterococcus faecium 1,231,501]
Length = 428
Score = 292 bits (748), Expect = 8e-77, Method: Composition-based stats.
Identities = 105/452 (23%), Positives = 181/452 (40%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D + S K EPDWM +R A + + P R+++ D+
Sbjct: 11 DAVNDFSLSKGEPDWMRTFRQDALAKADELPLPHIDRVKFHRWSLFDVK----------- 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E E IP A V S ++ EL + GV+
Sbjct: 60 --------ETQTISETGTIP-------AFDAMKDNPVLVQQGSWTIFEQLPVELAEKGVV 104
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E+P+LV++Y V + ++ AL+ A G F+Y+PK V L +
Sbjct: 105 FTDLFTAMIEYPELVQEYYMKKAVNMNEDQLTALHVAFMNSGIFLYVPKNVVIDEPLESL 164
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F + F+ LI+ADE S SYLE + + +VE++A ++IKYS
Sbjct: 165 FIQDGASDEHFFKHVLIVADEHSEFSYLERFQTTKEQVAKSSGNIIVEVIAKAGSKIKYS 224
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V I +++ +RG + + W L GE +
Sbjct: 225 AVDQLGE-------NITSYMNRRGHIL-RDASVDWAIGVMNDGHVIADFDSDLAGEGAHA 276
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E +AIS+G Q T++ + A +T I+ G+ T+ G + +GA +
Sbjct: 277 EVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGTLTFNGIGHILKGAKGADA 336
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 337 QQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLHKEEAERL 396
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISLEG 486
++ GF+ VL +P+E E ++I+ L G
Sbjct: 397 VIRGFLGSVLTAIPVEQVRKELVEVIEGKLNG 428
>gi|317120964|ref|YP_004100967.1| SufBD protein [Thermaerobacter marianensis DSM 12885]
gi|315590944|gb|ADU50240.1| SufBD protein [Thermaerobacter marianensis DSM 12885]
Length = 440
Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats.
Identities = 106/459 (23%), Positives = 187/459 (40%), Gaps = 37/459 (8%)
Query: 34 KGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPK 93
+G D++ I+ +EPDW++E R A R + + PSW + ++ L AP
Sbjct: 15 QGFTADLVDRIARAHDEPDWLVERRREALRIFNELPLPSWRHTKVDDLNLQALRP-VAPA 73
Query: 94 SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
S + + + P T A+ D V L
Sbjct: 74 SALPAWAEAALPP----------------------ATEAAAIAVQTDGRVEVRHMDPALA 111
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTV-VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
G++ + A H DLV+KY + + +AAL++A +T G FVY+P+G+
Sbjct: 112 DRGLVVTDLHTAARTHADLVEKYYMKSGLDPRSDRFAALHAAFWTGGFFVYVPRGLVVEK 171
Query: 213 ELSTYFRINEK--GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
+ I G L++ DE + + + A E L+ +E+ A
Sbjct: 172 PIYLITLITAGAAGASVSGHGLVVVDEQAQATLFDESDAHDLSEAALYTGQLEIHVQPAA 231
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
+ Y +VQNW + ++ + + T G + T + +
Sbjct: 232 RLDYVSVQNWRAPVREFS--------QKAGVVRRDATLVATTGFFGGSQTRNLFTLEMVE 283
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ E ++G Q D TK H +++T + ++GI G S Y+G + + RGA
Sbjct: 284 PGASMENILAYAASGQQHFDLFTKSRHASQSTFGNMTARGILTGASRLVYQGLIRIERGA 343
Query: 391 AHSRNFTQCDSLLIGNNCGA-HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
S ++ ++L++ IP +E + H AT ++ E LFY RG+ E
Sbjct: 344 HKSEDYLSSNTLILSPEAKVLDDIPSLEIEADDVKASHGATVGQVDQEQLFYLRSRGLDE 403
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ A L+V+GF +L K+P + A E ++ ++ LE V
Sbjct: 404 KQARRLLVSGFFEPLLGKIPNDAARE--RISELVLEKVV 440
>gi|69245843|ref|ZP_00603660.1| FeS assembly protein SufD [Enterococcus faecium DO]
gi|257879170|ref|ZP_05658823.1| FeS assembly protein SufD [Enterococcus faecium 1,230,933]
gi|257882023|ref|ZP_05661676.1| FeS assembly protein SufD [Enterococcus faecium 1,231,502]
gi|257890000|ref|ZP_05669653.1| FeS assembly protein SufD [Enterococcus faecium 1,231,410]
gi|258615556|ref|ZP_05713326.1| hypothetical protein EfaeD_07582 [Enterococcus faecium DO]
gi|260560183|ref|ZP_05832360.1| FeS assembly protein SufD [Enterococcus faecium C68]
gi|261208053|ref|ZP_05922728.1| FeS assembly protein SufD [Enterococcus faecium TC 6]
gi|289565516|ref|ZP_06445964.1| FeS assembly protein SufD [Enterococcus faecium D344SRF]
gi|293563477|ref|ZP_06677925.1| FeS assembly protein SufD [Enterococcus faecium E1162]
gi|293569077|ref|ZP_06680389.1| FeS assembly protein SufD [Enterococcus faecium E1071]
gi|293571249|ref|ZP_06682283.1| FeS assembly protein SufD [Enterococcus faecium E980]
gi|294615163|ref|ZP_06695047.1| FeS assembly protein SufD [Enterococcus faecium E1636]
gi|294619916|ref|ZP_06699292.1| FeS assembly protein SufD [Enterococcus faecium E1679]
gi|294620810|ref|ZP_06700014.1| FeS assembly protein SufD [Enterococcus faecium U0317]
gi|314938396|ref|ZP_07845687.1| FeS assembly protein SufD [Enterococcus faecium TX0133a04]
gi|314942321|ref|ZP_07849169.1| FeS assembly protein SufD [Enterococcus faecium TX0133C]
gi|314947746|ref|ZP_07851153.1| FeS assembly protein SufD [Enterococcus faecium TX0082]
gi|314951455|ref|ZP_07854505.1| FeS assembly protein SufD [Enterococcus faecium TX0133A]
gi|314993134|ref|ZP_07858520.1| FeS assembly protein SufD [Enterococcus faecium TX0133B]
gi|314996017|ref|ZP_07861095.1| FeS assembly protein SufD [Enterococcus faecium TX0133a01]
gi|68195545|gb|EAN09987.1| FeS assembly protein SufD [Enterococcus faecium DO]
gi|257813398|gb|EEV42156.1| FeS assembly protein SufD [Enterococcus faecium 1,230,933]
gi|257817681|gb|EEV45009.1| FeS assembly protein SufD [Enterococcus faecium 1,231,502]
gi|257826360|gb|EEV52986.1| FeS assembly protein SufD [Enterococcus faecium 1,231,410]
gi|260073750|gb|EEW62075.1| FeS assembly protein SufD [Enterococcus faecium C68]
gi|260077637|gb|EEW65353.1| FeS assembly protein SufD [Enterococcus faecium TC 6]
gi|289162714|gb|EFD10566.1| FeS assembly protein SufD [Enterococcus faecium D344SRF]
gi|291588258|gb|EFF20094.1| FeS assembly protein SufD [Enterococcus faecium E1071]
gi|291591983|gb|EFF23608.1| FeS assembly protein SufD [Enterococcus faecium E1636]
gi|291593853|gb|EFF25351.1| FeS assembly protein SufD [Enterococcus faecium E1679]
gi|291599595|gb|EFF30608.1| FeS assembly protein SufD [Enterococcus faecium U0317]
gi|291604479|gb|EFF33965.1| FeS assembly protein SufD [Enterococcus faecium E1162]
gi|291608656|gb|EFF37944.1| FeS assembly protein SufD [Enterococcus faecium E980]
gi|313589771|gb|EFR68616.1| FeS assembly protein SufD [Enterococcus faecium TX0133a01]
gi|313592374|gb|EFR71219.1| FeS assembly protein SufD [Enterococcus faecium TX0133B]
gi|313596412|gb|EFR75257.1| FeS assembly protein SufD [Enterococcus faecium TX0133A]
gi|313598938|gb|EFR77783.1| FeS assembly protein SufD [Enterococcus faecium TX0133C]
gi|313642294|gb|EFS06874.1| FeS assembly protein SufD [Enterococcus faecium TX0133a04]
gi|313645726|gb|EFS10306.1| FeS assembly protein SufD [Enterococcus faecium TX0082]
Length = 428
Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats.
Identities = 106/452 (23%), Positives = 181/452 (40%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D + S K EPDWM +R A + + P R+++ D+
Sbjct: 11 DAVNDFSLSKGEPDWMRTFRQDALAKADELPLPHIDRVKFHRWSLFDVK----------- 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E E IP A V S ++ EL + GVI
Sbjct: 60 --------ETQTISETGTIP-------AFDAMKDNPVLVQQGSWTIFEQLPVELAEKGVI 104
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E+P+LV++Y V + ++ AL+ A G F+Y+PK V L +
Sbjct: 105 FTDLFTAMIEYPELVQEYYMKKAVNMNEDQLTALHVAFMNSGIFLYVPKNVVIDEPLESL 164
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F + F+ LI+ADE S SYLE + + +VE++A ++IKYS
Sbjct: 165 FIQDGASDEHFFKHVLIVADEHSEFSYLERFQTTKEQVAKSSGNIIVEVIAKAGSKIKYS 224
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V I +++ +RG + + W L GE +
Sbjct: 225 AVDQLGE-------NITSYMNRRGHIL-RDASVDWAIGVMNDGHVIADFDSDLAGEGAHA 276
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E +AIS+G Q T++ + A +T I+ G+ T+ G + +GA +
Sbjct: 277 EVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGTLTFNGIGHILKGAKGADA 336
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 337 QQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLHKEEAERL 396
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISLEG 486
++ GF+ VL +P+E E ++I+ L G
Sbjct: 397 VIRGFLGSVLTAIPVEQVRKELVEVIEGKLNG 428
>gi|293331449|ref|NP_001168818.1| hypothetical protein LOC100382623 [Zea mays]
gi|223973189|gb|ACN30782.1| unknown [Zea mays]
Length = 278
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 177/278 (63%), Positives = 214/278 (76%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
ME+STYFRIN+K TGQFERTLI+ADE S VSYLEGCTAP D NQLHAAVVELV + AE
Sbjct: 1 MEISTYFRINDKETGQFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCENGAE 60
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
IKYSTVQNWY GD +G+GGIYNFVTKRG C+G SKISWTQ+ETGSAITWKYPS L G+
Sbjct: 61 IKYSTVQNWYSGDEEGRGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWKYPSVELVGD 120
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
S GEFYS+A++ QQ D+GTKM+H KN+ SRI+SKGISAG S N YRG V ++ A
Sbjct: 121 DSVGEFYSVALTKDCQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVLMNSSAE 180
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
++ N +QCDSLLIG+N A+T P I+ +S +EHEA+TSKI ++ LFY QRG+ E
Sbjct: 181 NAYNSSQCDSLLIGDNAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGVDHEK 240
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
A+A ++ GF R V + LP EFA E L+++ LEGSVG
Sbjct: 241 AVAAMIGGFCRSVFEHLPYEFAQEVDALMNLKLEGSVG 278
>gi|227552274|ref|ZP_03982323.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecium TX1330]
gi|257892762|ref|ZP_05672415.1| FeS assembly protein SufD [Enterococcus faecium 1,231,408]
gi|257895148|ref|ZP_05674801.1| FeS assembly protein SufD [Enterococcus faecium Com12]
gi|293377864|ref|ZP_06624045.1| FeS assembly protein SufD [Enterococcus faecium PC4.1]
gi|227178604|gb|EEI59576.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecium TX1330]
gi|257829141|gb|EEV55748.1| FeS assembly protein SufD [Enterococcus faecium 1,231,408]
gi|257831713|gb|EEV58134.1| FeS assembly protein SufD [Enterococcus faecium Com12]
gi|292643411|gb|EFF61540.1| FeS assembly protein SufD [Enterococcus faecium PC4.1]
Length = 428
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 107/452 (23%), Positives = 182/452 (40%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D + S K EPDWM +R A + + P R+++ D+
Sbjct: 11 DAVNDFSLSKGEPDWMRTFRQDALTKADELPLPHIDRVKFHRWSLFDVK----------- 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E E IP A V S ++ EL + GVI
Sbjct: 60 --------ETQTISETGTIP-------AFDAMKDNPVLVQQGSWTIFEQLPVELAEKGVI 104
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F +S A+ E+P+LV++Y V + ++ AL+ A G F+Y+PK V L +
Sbjct: 105 FTDLSTAMIEYPELVQEYYMKKAVNMDEDQLTALHVAFMNSGIFLYVPKNVVIDEPLESL 164
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F + F+ LI+ADE S SYLE + + +VE++A ++IKYS
Sbjct: 165 FIQDGASDEHFFKHVLIVADEHSEFSYLERFQTTKEQVAKSSGNIIVEVIAKAGSKIKYS 224
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V I +++ +RG + + W L GE +
Sbjct: 225 AVDQLGE-------NITSYMNRRGHIL-RDASVDWAIGVMNDGHVIADFDSDLAGEGAHA 276
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E +AIS+G Q T++ + A +T I+ G+ T+ G + +GA +
Sbjct: 277 EVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGTLTFNGIGHILKGAKGADA 336
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 337 QQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLHKEEAERL 396
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISLEG 486
++ GF+ VL +P+E E ++I+ L G
Sbjct: 397 VIRGFLGSVLTAIPVEQVRKELVEVIEGKLNG 428
>gi|320449480|ref|YP_004201576.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
gi|320149649|gb|ADW21027.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
Length = 430
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 108/453 (23%), Positives = 189/453 (41%), Gaps = 28/453 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L++ + IS EP W+LE RL A + + PS + A + DL + +
Sbjct: 4 LDKTQVEAISRALKEPGWVLEKRLKALEAFARLPYPS---KKDEAWRYTDLSEAPLEQEV 60
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
P+ L EL P + L S V D V EEL
Sbjct: 61 ETPKGLSLSRDEL---------PELVKRRLEKTDVSGFLVFVGPD--LVYAEVPEELSAK 109
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G++F ++EA+ HP V+ L V V D +AA NSA FT G+F+Y+P G+ L
Sbjct: 110 GLVFTSLAEALKTHPGKVEATLFRGVYVED-KFAAENSAFFTHGAFLYVPAGLEVEKPLG 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F++ E G R+LI ++ + +Y+E LH + E+V A ++++
Sbjct: 169 V-FKVLEGGKASAGRSLIFLEDNAKAAYIEEYL-SLDLPPTLHLSATEMVLRPGARLRHA 226
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
VQ G +++F +R + ++ + G + L G +
Sbjct: 227 HVQTLGDG-------VWHFHRQRAL-LERDAALNDLVVNLGGRYARSEVASELLGPGAES 278
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E + +G Q D T H+ +T S ++ KG + + G + + RGA +
Sbjct: 279 EMLGLYFGHGLQHFDHYTLQHHVEHHTRSDLLYKGAVKDEARAVFSGLIKLERGAQKTDA 338
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ +L++ +IP +E + H +TT+ + + LFY RG+ A L
Sbjct: 339 YQANRNLILSPTARVDSIPQLEIGANDVRCTHGSTTAPVDEMQLFYLQSRGLSRSLAQEL 398
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+V + +VL ++P++ + ++ +E V
Sbjct: 399 LVKAHLADVLNRIPLKA---LRAHLEAVIEEKV 428
>gi|313902525|ref|ZP_07835926.1| FeS assembly protein SufD [Thermaerobacter subterraneus DSM 13965]
gi|313467211|gb|EFR62724.1| FeS assembly protein SufD [Thermaerobacter subterraneus DSM 13965]
Length = 440
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 108/469 (23%), Positives = 189/469 (40%), Gaps = 37/469 (7%)
Query: 24 ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDF 83
N++ +G +++ I+ +EPDW++E R A+R + + PSW R +
Sbjct: 5 VDNLETLAQAQGFTAELVDRIARAHDEPDWLVERRREAFRIFSELPLPSWRHTRVDDLKL 64
Query: 84 DDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
+ L AP S + + + P A+ D
Sbjct: 65 ERLRP-VAPASALPAWAEASLPP----------------------AAEAAAIAVQVDGRV 101
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFV 202
VT L + G++ + A H +LV+KY + + G + +AAL++A +T G FV
Sbjct: 102 EVTHLDPALAERGLVVSDLHTAARTHGELVQKYFMQSGLDAGADRFAALHAAFWTGGFFV 161
Query: 203 YIPKGVRCPMELSTYFRIN--EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
Y+P+G+ + I G L++ DE + + + A E L+
Sbjct: 162 YVPRGLVVEKPIYLVNLITGRAAGASVSGHGLVVVDEQAEATLFDESDAHDLAEAALYTG 221
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+E+ A + Y + QNW + ++ + + T G T
Sbjct: 222 QLEIHVQPAARLNYVSFQNWRGPVREFS--------QKAGVVRRDATLRVTTGFFGGNQT 273
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ + E + G Q D T+ H A +T + ++GI G S Y
Sbjct: 274 RHQFFLDMVEPGASMEHILAYAAAGQQHFDLFTRSRHGAPSTFGNMTARGILTGASRLVY 333
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGA-HTIPYIESKNSSCNLEHEATTSKISDEHL 439
+G + + RGA S ++ ++L++ IP +E + H AT +I E L
Sbjct: 334 QGLIRIDRGAHKSEDYLSSNTLILSPEAKVLDDIPSLEIEADDVKASHGATVGQIDQEQL 393
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
FY RG+ E+ A L+V+GF +L K+P E A E ++ ++ LE V
Sbjct: 394 FYLRSRGLDEKQARRLLVSGFFEPLLGKIPNEAAQE--RISELVLEKVV 440
>gi|320547991|ref|ZP_08042272.1| FeS assembly protein SufD [Streptococcus equinus ATCC 9812]
gi|320447337|gb|EFW88099.1| FeS assembly protein SufD [Streptococcus equinus ATCC 9812]
Length = 420
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 86/452 (19%), Positives = 180/452 (39%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++++ S K EP W+ E RL A+ + P R+++ + D
Sbjct: 2 TKELVLNFSQAKAEPLWLQERRLAAFDNIDKLPLPEINRVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++V + + LG + + +V+ +L + G
Sbjct: 51 -GTISENVALANVPDFTALGDNPK---------------LVQVGTQTVLEQLPMDLMEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
++F A+ E P++++KY + ++ AA ++A F + +Y+P V +
Sbjct: 95 IVFTDFYSALEEIPEVIEKYFGSARGGKEDKLAAYHTAYFNSAAVLYVPDNVDIKEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F ++ F LI+ + S++SYLE + E VE++ALD + +K+
Sbjct: 155 LFFQDKASDVPFNKHILIVVGKNSHISYLERFESIGEGEATATANISVEVIALDGSHVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++R G + + W L G+ S
Sbjct: 215 SAIDRLGE-------NVTTYISRR-AHHGKDAVVDWALGIMNEGNVIADFDSDLYGDGSQ 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + +T I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVVAASSGRQVQGVDTRVTNYGCHTVGHILQHGVILERGTLTFNGVGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ + ++Y + RGI +E A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPDDMYYLMSRGIDKETAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E ++D LE
Sbjct: 387 LVIRGFLGTVITEIPVKEVRDEMIAVLDNKLE 418
>gi|257886560|ref|ZP_05666213.1| FeS assembly protein SufD [Enterococcus faecium 1,141,733]
gi|257822614|gb|EEV49546.1| FeS assembly protein SufD [Enterococcus faecium 1,141,733]
Length = 428
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 106/452 (23%), Positives = 181/452 (40%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D + S K EPDWM +R A + + P R+++ D+
Sbjct: 11 DAVNDFSLSKGEPDWMRTFRQDALTKADELPLPHIDRVKFHRWSLFDVK----------- 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E E IP A V S ++ EL + GVI
Sbjct: 60 --------ETQTISETGTIP-------AFDAMKDNPVLVQQGSWTIFEQLPVELAEKGVI 104
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E+P+LV++Y V + ++ AL+ A G F+Y+PK V L +
Sbjct: 105 FTDLFTAMIEYPELVQEYYMKKAVNLDEDQLTALHVAFMNSGIFLYVPKNVVIDEPLESL 164
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F + F+ LI+ADE S SYLE + + +VE++A ++IKYS
Sbjct: 165 FIQDGASDEHFFKHVLIVADEHSEFSYLERFQTTKEQVAKSSGNIIVEVIAKAGSKIKYS 224
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V I +++ +RG + + W L GE +
Sbjct: 225 AVDQLGE-------NITSYMNRRGHIL-RDASVDWAIGVMNDGHVIADFDSDLAGEGAHA 276
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E +AIS+G Q T++ + A +T I+ G+ T+ G + +GA +
Sbjct: 277 EVKIVAISSGRQIQGIDTRVTNKAPHTIGHILQHGVIREKGTLTFNGIGHILKGAKGADA 336
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 337 QQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLHKEEAERL 396
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISLEG 486
++ GF+ VL +P+E E ++I+ L G
Sbjct: 397 VIRGFLGSVLTAIPVEQVRKELVEVIEGKLNG 428
>gi|171777442|ref|ZP_02919192.1| hypothetical protein STRINF_00019 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283260|gb|EDT48684.1| hypothetical protein STRINF_00019 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 431
Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats.
Identities = 89/452 (19%), Positives = 179/452 (39%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ + S K EP W+ E RL A+ + P R+++ + D
Sbjct: 13 TKESVLNFSQAKAEPLWLQERRLAAFDHIDKLPLPEVNRVKFHRWNLGD----------- 61
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+DV + + LG + + +V+ +L G
Sbjct: 62 -GSISEDVALANVPDFTALGDNPK---------------LVQVGTQTVLEQLPVDLMSKG 105
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P++++KY ++ AA ++A F + +Y+P V +
Sbjct: 106 VIFTDFYSALEEIPEVIEKYFGKARGDLEDKLAAYHTAYFNSAAVLYVPDNVDIEEPIEG 165
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F ++ F LII + S++SYLE + + + VE++ALD +++K+
Sbjct: 166 LFFQDKASDVPFNKHVLIIVGKNSHISYLERFESIGEGDAKATANISVEVIALDGSQVKF 225
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++R G + + W L G+ S
Sbjct: 226 SAIDRLG-------NNVTTYISRR-AHHGKDAVVDWAIGIMNEGNVIADFDSDLYGDGSQ 277
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + ++ I+ G+ T+ G + +GA +
Sbjct: 278 ANLKVVAASSGRQVQGVDTRVTNYGCHSVGHILQHGVILERGTLTFNGVGHIVKGAKGAD 337
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RGI +E A
Sbjct: 338 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGIDKETAER 397
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E ++D LE
Sbjct: 398 LVIRGFLGTVITEIPVKEVRDEMIAVLDSKLE 429
>gi|149002406|ref|ZP_01827340.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS69]
gi|147759343|gb|EDK66335.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS69]
Length = 309
Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats.
Identities = 137/316 (43%), Positives = 190/316 (60%), Gaps = 18/316 (5%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
+ E + + ID+ +YK+GF +++ V KGLNE +IR +SA K EP+WMLE+RL +Y
Sbjct: 1 MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSY 60
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+ M +W IDFDDL YY P +S DDV ++ T+E++GIP E+
Sbjct: 61 ETFKKMPMQTWG-ADLSEIDFDDLIYYQKPSDKPA-RSWDDVPEKIKETFERIGIPEAER 118
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
LAG A ++S V KEE +K G+IF A+ E+PDL K+Y + +VP
Sbjct: 119 AYLAGAS-------AQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVP 171
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN AALNSAV++ G+F+Y+PKGV+ + L TYFRIN + GQFERTLII DEG+ V
Sbjct: 172 PTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVH 231
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
Y+EGCTAP N LHAA+VE+ ALD A ++Y+T+QNW +YN VTKR +
Sbjct: 232 YVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNW-------SDNVYNLVTKRAKAQ 284
Query: 303 GMRSKISWTQLETGSA 318
+ + W G+
Sbjct: 285 -KDATVEWIDGNLGAK 299
>gi|98979394|gb|ABF59996.1| SufB [Plasmodium vivax]
Length = 470
Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats.
Identities = 179/477 (37%), Positives = 265/477 (55%), Gaps = 15/477 (3%)
Query: 7 TVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWL 66
T+ I YKY ++ I + +GLN ++I+ +S+ ++ ++ + +
Sbjct: 3 TLKNFLNIYNLNYKYQYKNKINLYLIRQGLNINLIKNLSSNIFLYMFIYNFKKYSLKLLN 62
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
K P W P I++D++ YY+ + L Y K + I E L
Sbjct: 63 IFKLPDWNFFDCPNINYDNIIYYS-----------SILKDNNLIYYLKNNLNI---EFLD 108
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
+ ++D +FDS+S++ T + LKK G+IF P+ + I ++P L+KKYL ++ DN
Sbjct: 109 SILIKNNSIDIIFDSMSILHTTQYFLKKLGIIFFPLFDIIFKYPLLIKKYLGPIISYKDN 168
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
F+A +NS +F++GSF YIPK VR LS YF+ N QF R LI+ + Y SYLEG
Sbjct: 169 FFANINSIIFSEGSFGYIPKYVRWNFNLSPYFKTNSSDFAQFGRPLIMVGKYPYGSYLEG 228
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
TA E+QLH A+V ++ D IKY QNW G G GG+YNF TKRG C S
Sbjct: 229 WTASMYKESQLHVAIVGIIVKDYGYIKYYPFQNWDRGGYLGNGGLYNFTTKRGICLN-YS 287
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
K+ W Q+E GS ITWKYPS +L+G+ S FYSI+ + Q D+G+KM H+ T S I
Sbjct: 288 KLDWIQVEVGSIITWKYPSTILKGKFSISNFYSISFISNMQIADTGSKMYHIGSYTKSYI 347
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+SK IS S N +RG V + + S N+T+C SL+ GNN TIPYI++ N++ ++
Sbjct: 348 ISKSISLNNSLNIFRGLVYIKPFSYKSYNYTECSSLIFGNNSLTVTIPYIKNYNNTSYVK 407
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
EA SKI +LF +QRG+ +I+L++ GF ++ KLP EF +E L +
Sbjct: 408 QEAFVSKIEIIYLFLLMQRGLSISESISLLIIGFCSDIYNKLPFEFNLEIPILFSLK 464
>gi|157151539|ref|YP_001450993.1| FeS assembly protein SufD [Streptococcus gordonii str. Challis
substr. CH1]
gi|157076333|gb|ABV11016.1| FeS assembly protein SufD [Streptococcus gordonii str. Challis
substr. CH1]
Length = 420
Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EP+W+ R A+ + + P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPEWLASLRQKAFDKIDQLDLPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ D + + LG ++ + +V+ +L + G
Sbjct: 51 -GRISDSEPLTSVPDFTSLGDNLK---------------FIQMGTQTVLEQLPADLAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+LV+K+ + + ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VVFTDFHTALEEIPELVEKHFMSAIKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGAVPATANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLG-------QNVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|257897760|ref|ZP_05677413.1| FeS assembly protein SufD [Enterococcus faecium Com15]
gi|257835672|gb|EEV60746.1| FeS assembly protein SufD [Enterococcus faecium Com15]
Length = 428
Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats.
Identities = 103/452 (22%), Positives = 180/452 (39%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ + S K EPDWM +R A + + P R+++ D+
Sbjct: 11 NAVNDFSLSKGEPDWMRTFRQDALTKADELPLPHIDRVKFHRWSLFDVK----------- 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E E IP A V S ++ EL + GVI
Sbjct: 60 --------ETQTISETGTIP-------AFDAMKDNPVLVQQGSWTIFEQLPVELAEKGVI 104
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F + A+ E+P+LV++Y V + ++ AL+ A G F+Y+PK + L +
Sbjct: 105 FTDLFTAMIEYPELVQEYYMKKAVNMDEDQLTALHVAFMNSGIFLYVPKNIVIDEPLESL 164
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F + F+ LI+ADE S SYLE + + +VE++A ++IKYS
Sbjct: 165 FIQDGASDEHFFKHVLIVADEHSEFSYLERFQTTKEQVAKSSGNIIVEVIAKAGSKIKYS 224
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V I +++ +RG + + W L GE +
Sbjct: 225 AVDQLGE-------NITSYMNRRGHIL-RDASVDWAIGVMNDGHVIADFDSDLAGEGAHA 276
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E +AIS+G Q T++ + +T I+ G+ T+ G + +GA +
Sbjct: 277 EVKIVAISSGRQIQGIDTRVTNKVPHTIGHILQHGVIREKGTLTFNGIGHILKGAKGADA 336
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 337 QQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLHKEEAERL 396
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISLEG 486
++ GF+ VL +P+E E ++I+ L G
Sbjct: 397 VIRGFLGSVLTAIPVEQVRKELVEVIEGKLNG 428
>gi|322388025|ref|ZP_08061631.1| FeS assembly protein SufD [Streptococcus infantis ATCC 700779]
gi|321141046|gb|EFX36545.1| FeS assembly protein SufD [Streptococcus infantis ATCC 700779]
Length = 420
Score = 289 bits (739), Expect = 7e-76, Method: Composition-based stats.
Identities = 88/452 (19%), Positives = 177/452 (39%), Gaps = 40/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDD-LYYYAAPKSI 95
++ I+ S EP W+ + R A+ + +++ P R+++ + D + + P +
Sbjct: 2 TKETIKLFSEMHAEPSWLSDLRQKAFDKIESLELPVIERVKFHRWNLGDGIIMESEPSA- 60
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ + +V EL +
Sbjct: 61 ---------------------------NVPDFTALDNHLKLVQVGTQTVFEQIPVELAEQ 93
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV+F A+ E P+LV+++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 94 GVVFTDFHSALEEIPELVEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIE 153
Query: 216 TYFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIK 273
F + F LIIA + S +SYLE + + VE++A A++K
Sbjct: 154 GIFYQDSDSDVPFNKHILIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVK 213
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
++ + + ++++RG G + I W L G S
Sbjct: 214 FAAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLLGNGS 265
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 266 HADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGA 325
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 326 DAQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAE 385
Query: 454 ALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 386 RLVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|76788150|ref|YP_328873.1| hypothetical protein SAK_0200 [Streptococcus agalactiae A909]
gi|76563207|gb|ABA45791.1| FeS assembly protein SufD [Streptococcus agalactiae A909]
Length = 420
Score = 289 bits (739), Expect = 8e-76, Method: Composition-based stats.
Identities = 91/452 (20%), Positives = 178/452 (39%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I K EP W+ E RL A+ + ++ P R+++ + D
Sbjct: 2 SKEAILNFLQAKGEPTWLQELRLKAFEKIEELELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+L IP + + +V+ EL + G
Sbjct: 51 ---------GTILENDYTANIP-------DFTELGNNPKLVQIGTQTVLEQVPMELIEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+++++Y P ++ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFYSALEEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F L+I + + VSYLE + + VE++A ++IK+
Sbjct: 155 LFYQDSQSKVPFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+++ + F+++RG + I W L G+ S
Sbjct: 215 ASIDRLGE-------NVTTFISRRG-RHSSDATIDWALGVMNEGNVVADFDSDLIGDGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G V +GA +
Sbjct: 267 ANLKVVAASSGRQVQGIDTRVTNYGCNSVGHILQHGVILERGTLTFNGIGHVIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E L+Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQ 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E +ID LE
Sbjct: 387 LVIRGFLGTVIAEIPVKEVRDEMIAVIDTKLE 418
>gi|77405114|ref|ZP_00782213.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|77409046|ref|ZP_00785764.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77172340|gb|EAO75491.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae COH1]
gi|77176257|gb|EAO79027.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae H36B]
gi|319744060|gb|EFV96437.1| FeS assembly protein SufD [Streptococcus agalactiae ATCC 13813]
Length = 420
Score = 289 bits (739), Expect = 9e-76, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 178/452 (39%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I K EP W+ E RL A+ + ++ P R+++ + D
Sbjct: 2 SKEAILNFLQAKGEPTWLQELRLKAFEKIEELELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+L IP + + +V+ EL + G
Sbjct: 51 ---------GTILENDYTANIP-------DFTELGNNPKLVQIGTQTVLEQVPMELIEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+++++Y P ++ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFYSALEEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F L+I + + VSYLE + + VE++A ++IK+
Sbjct: 155 LFYQDSQSKVPFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+++ + F+++RG + I W L G+ S
Sbjct: 215 ASIDRLGE-------NVTTFISRRG-RHSSDATIDWALGVMNEGNVVADFDSDLIGDGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVVAASSGRQVQGIDTRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E L+Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQ 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E +ID LE
Sbjct: 387 LVIRGFLGTVIAEIPVKEVRDEMIAVIDTKLE 418
>gi|320104748|ref|YP_004180339.1| SufBD protein [Isosphaera pallida ATCC 43644]
gi|319752030|gb|ADV63790.1| SufBD protein [Isosphaera pallida ATCC 43644]
Length = 463
Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats.
Identities = 103/463 (22%), Positives = 190/463 (41%), Gaps = 33/463 (7%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYY 89
G + D + ++EP W + R A+ R++ P+ W R + D
Sbjct: 11 GFHADALAAFLEGRDEPSWFGDRRRAAFERFIQTPLPTLRDEEWRRTDLRGLKLDQFGP- 69
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
A ++L LA ++ V D
Sbjct: 70 VAGGPASPSEALSASPAW---------------STLAETHGAEFGVH-HRDGRPATHPAS 113
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
+GV+F ++ A+ HPDL++++L + + +A L SA + G +Y+P+GV+
Sbjct: 114 APELPAGVVFTDLATALKRHPDLIQRHLGHAIDTQADAFALLQSAFVSGGVALYVPQGVK 173
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL--HAAVVELVAL 267
L + G F TL+I ++G+ ++++ + QR + H VEL
Sbjct: 174 LDHPLFHLIELGPDGRSDFNHTLVILEKGAEATFIQETASTQRPDKTPALHVGAVELFVG 233
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
+ A++++ +QNW ++F +R + + WT G+ +
Sbjct: 234 ERAKLRFVNIQNWDRQ-------TWHFSRERAVVAAEGA-LQWTVGGLGARLAKVNQDVA 285
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L G ++ + + + G Q + T+ H A TTS ++ KG S ++G + V
Sbjct: 286 LAGPRARAQVNGVLFTTGRQHLAYFTRQDHQAPQTTSDLLYKGGLTDHSRLVWKGMIRVE 345
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
A + + + DSL++ + + +IP +E + + H AT I E LFYC RG+
Sbjct: 346 PDAQKTDAYQKNDSLILSPHARSDSIPGLEIEANDVRCTHGATAGPIDPEMLFYCRSRGL 405
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLEGSVG 489
E ++ LIV GF V ++ +E A + ++ SVG
Sbjct: 406 GREESVRLIVEGFFANVYDRISLESARATLETVVAQRFAESVG 448
>gi|297565448|ref|YP_003684420.1| FeS assembly protein SufD [Meiothermus silvanus DSM 9946]
gi|296849897|gb|ADH62912.1| FeS assembly protein SufD [Meiothermus silvanus DSM 9946]
Length = 435
Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats.
Identities = 110/453 (24%), Positives = 201/453 (44%), Gaps = 26/453 (5%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ D++ +S K EP W+LE RL A+ + + P+ ++ + +L
Sbjct: 7 LSRDLVLEVSQKLQEPRWLLEKRLAAWEAFARLPYPT---LKTEEWRYTNLS-------K 56
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
V + L P + + +P + + L + S VAV D V EEL+
Sbjct: 57 VPLEGLALELPTGQK-LSRQDLPAQVRSRLEQAELSGVAVFVGAD--LVYLELPEELQAQ 113
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV+ I+EA+ H V++ L V + A N+A+FT G+F+++PKGV +
Sbjct: 114 GVVLTSIAEALKTHQAQVREALFRAVGWNEKLQA-YNAALFTHGAFLFVPKGVEFDAPIG 172
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F E G RTLI+A+ S Y+E +P + E ++ +V EL+ A +++S
Sbjct: 173 V-FNYLEGGRLSIGRTLIVAEPNSKAVYIEEYVSPAQVEEGVNLSVSELILEQGARLRHS 231
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
VQ G Y+F R ++++ G + L G +
Sbjct: 232 HVQTLALG-------FYHFHRTRAL-LARDARLNDLTATFGGTLARTETQSELAGPGADS 283
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E + ++G Q +D T H +T S ++ KG ++ Y G + + A +
Sbjct: 284 EMLGLYFAHGEQHLDHYTLQHHAEHHTKSDLLYKGAVKDRAHTVYSGLIKLEEAAQKADA 343
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ +LL+ + +IP +E + H +TT+ + + LFY + RG+P+ A +
Sbjct: 344 YQSNRNLLLSSEARVDSIPQLEIAANEVRCTHGSTTAPVDEMQLFYLMSRGVPKHVAQQV 403
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+V + +VL ++P+ + ++ I+ +E V
Sbjct: 404 LVKAHLYDVLTRIPL---LPLREHIERIIEEKV 433
>gi|25010213|ref|NP_734608.1| hypothetical protein gbs0138 [Streptococcus agalactiae NEM316]
gi|77414654|ref|ZP_00790791.1| Unknown [Streptococcus agalactiae 515]
gi|23094565|emb|CAD45783.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159296|gb|EAO70470.1| Unknown [Streptococcus agalactiae 515]
Length = 420
Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 178/452 (39%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I K EP W+ E RL A+ + ++ P R+++ + D
Sbjct: 2 SKEAILNFLQAKGEPTWLQELRLKAFEKIEELELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+L IP + + +V+ EL + G
Sbjct: 51 ---------GTILENDYTANIP-------DFTELGNNPKLVQIGTQTVLEQVPMELIEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+++++Y P ++ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFYSALEEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F L+I + + VSYLE + + VE++A ++IK+
Sbjct: 155 LFYQDNQSKVPFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+++ + F+++RG + I W L G+ S
Sbjct: 215 ASIDRLGE-------NVTTFISRRG-RHSSDATIDWALGVMNEGNVVADFDSDLIGDGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVVAASSGRQVQGIDTRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E L+Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQ 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E +ID LE
Sbjct: 387 LVIRGFLGTVIAEIPVKEVRDEMIAVIDTKLE 418
>gi|22536327|ref|NP_687178.1| hypothetical protein SAG0142 [Streptococcus agalactiae 2603V/R]
gi|76799313|ref|ZP_00781478.1| FeS assembly protein SufD [Streptococcus agalactiae 18RS21]
gi|77411795|ref|ZP_00788130.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
gi|22533150|gb|AAM99050.1|AE014197_18 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|76585340|gb|EAO61933.1| FeS assembly protein SufD [Streptococcus agalactiae 18RS21]
gi|77162130|gb|EAO73106.1| Uncharacterized protein family (UPF0051) family [Streptococcus
agalactiae CJB111]
Length = 420
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 87/452 (19%), Positives = 176/452 (38%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I K EP W+ E RL A+ + ++ P R+++ + D
Sbjct: 2 SKEAILNFLQAKGEPTWLQELRLKAFEKIEELELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + +V+ EL + G
Sbjct: 51 ----------------GTILENDYTANVPDFTELGNNPKLVQIGTQTVLEQVPMELIEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+++++Y P ++ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFYSALEEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F L+I + + VSYLE + + VE++A ++IK+
Sbjct: 155 LFYQDSQSKVPFNKHILLIVGKNAKVSYLERFESIGDGTERTSANISVEVIAQAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+++ + F+++RG + I W L G+ S
Sbjct: 215 ASIDRLGE-------NVTTFISRRG-RHSSDATIDWALGVMNEGNVVADFDSDLIGDGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVVAASSGRQVQGIDTRVTNYGCNSVGHILQHGVILERGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E L+Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQ 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E +ID LE
Sbjct: 387 LVIRGFLGTVIAEIPVKEVRDEMIAVIDTKLE 418
>gi|218294672|ref|ZP_03495526.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
gi|218244580|gb|EED11104.1| FeS assembly protein SufD [Thermus aquaticus Y51MC23]
Length = 431
Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/453 (22%), Positives = 190/453 (41%), Gaps = 27/453 (5%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L++ + IS EP W L+ RL A + + PS + + DL
Sbjct: 4 LDKTQVEAISQALGEPAWALKKRLEALEAFARLPYPS---RKDENWRYTDLS-------E 53
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ L T + L P + L + V D V EELK
Sbjct: 54 APLDRPVEAPKGLSLTRDTL--PEAVKRRLEKTDVAAFLVFVGPD--LVYAEVPEELKAQ 109
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G++ ++EA+ HP+ V+ L V ++ +AA NSA FT G+F+Y+P G+ +
Sbjct: 110 GLVLTSLAEAMRLHPEKVEAGLFQAV-FTEDKFAAQNSAFFTHGAFLYVPAGLELEKPVG 168
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + E R+L+ ++ + +Y+E +P LH + E+V A ++++
Sbjct: 169 VFKVLLEGSKASAGRSLLFLEDNAKAAYIEEYLSP-DLPPTLHLSATEMVLRPGARLRHA 227
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V+ + G+++F +R + ++ + G A + L G S
Sbjct: 228 HVETFG-------NGVWHFHRQRAL-LERDAGLNDLVVNLGGAYARSEVASELLGPGSES 279
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E + +G QQ D T H+ +T S ++ KG + + G + + RGA +
Sbjct: 280 EMLGLYFGHGRQQFDHYTLQHHVEHHTRSDLLYKGAVKDEARAVFSGLIRLERGAQKTDA 339
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ +L++ +IP +E + H +TT+ + + LFY RG+P A L
Sbjct: 340 YQANRNLILSPTARVDSIPQLEIGANDVRCTHGSTTAPVDETQLFYLQSRGLPRTLAQEL 399
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+V + +VL ++P++ + I+ +E V
Sbjct: 400 LVKAHLADVLTRIPLKA---LRAHIEAVIEEKV 429
>gi|283782289|ref|YP_003373044.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
gi|283440742|gb|ADB19184.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
Length = 443
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 94/443 (21%), Positives = 182/443 (41%), Gaps = 28/443 (6%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
G + A +NEP W+++ R + + T SW D+ + P
Sbjct: 15 GFTQRSFEAFLASRNEPAWLVDLRRRWWDVFQTQ---SWPARNSEEWIRTDIRLF-KPDQ 70
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ L E + LAG ++ DS V + +
Sbjct: 71 YQ-------LPIGSLEAAETTQPLLNVGVQLAGSTSA-------VDSRPVKSILDPKWAA 116
Query: 155 SGVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
GV+F + + + H DL+++YL T + + +A+L++A ++ G F+Y+P+GV
Sbjct: 117 KGVVFGSLDQLVHTHGDLIRRYLFTEAMNPAYDRFASLHAACWSGGQFLYVPRGVVIDEP 176
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ ++ G TL++ +EG+ + L + + +H E++ N+ ++
Sbjct: 177 VHMLSALHHGG-CDMGHTLVVLEEGAEATVLSETASHGEKDAGMHCGATEVIQRANSRLR 235
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
++QNW G +++F ++ G + + WT GS + L G +
Sbjct: 236 LVSLQNWGLG-------VWHFAHQK-AVLGRDASLQWTIAAIGSRLAKVNQHVELAGIGA 287
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ + S Q + T H A S + K S +RG + V + A +
Sbjct: 288 ESQVNGVLFSEDKQHLSYHTLQHHKAPQCISDFLYKSALQDKSRTVWRGMIKVDKAAQKT 347
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ + D+LL+ A +IP +E + H +TT K+ +E +FY RG + A
Sbjct: 348 NGYQRNDNLLLSATSRADSIPGLEIEADDVRCTHGSTTGKVDEELIFYAQARGFTRKEAT 407
Query: 454 ALIVNGFVREVLQKLPMEFAVEA 476
+IV GF +++ ++ +E +A
Sbjct: 408 RMIVTGFFQQIFDRITLEQVRDA 430
>gi|215445654|ref|ZP_03432406.1| hypothetical protein MtubT_06804 [Mycobacterium tuberculosis T85]
gi|289757570|ref|ZP_06516948.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289713134|gb|EFD77146.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length = 644
Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats.
Identities = 102/259 (39%), Positives = 159/259 (61%), Gaps = 11/259 (4%)
Query: 234 IADEGSYVSY---LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ + SY++Y + CTAP + LH+AVVE++ +A ++Y+T+QNW
Sbjct: 394 VENPDSYLAYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNN 446
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN VTKR + + W GS +T KYP+ + GE + GE S+A + Q D
Sbjct: 447 VYNLVTKRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQD 505
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+G KMLHLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ +
Sbjct: 506 TGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRS 565
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPM
Sbjct: 566 DTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPM 625
Query: 471 EFAVEAQKLIDISLEGSVG 489
E+A+E +LI++ +EG+VG
Sbjct: 626 EYALELNRLIELQMEGAVG 644
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 36/51 (70%)
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
F+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGC
Sbjct: 5 FIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCLPAG 55
>gi|325695647|gb|EGD37547.1| FeS assembly protein SufD [Streptococcus sanguinis SK150]
Length = 420
Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQLGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VVFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S VSYLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVSYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|322386839|ref|ZP_08060463.1| FeS assembly protein SufD [Streptococcus cristatus ATCC 51100]
gi|321269121|gb|EFX52057.1| FeS assembly protein SufD [Streptococcus cristatus ATCC 51100]
Length = 420
Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats.
Identities = 94/451 (20%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I S EP W+ + R A+ + + P R+++ + D
Sbjct: 2 TKELIHEFSQVHAEPVWLADLRQQAFDKMDQLDLPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ D + + LG ++ + +V+ +L + G
Sbjct: 51 -GRLSDSEPLTNVPDFTALGDNLK---------------FIQMGTQTVLEQLPADLAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGALLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S VSYLE D + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVSYLERLETYGEDSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|288904536|ref|YP_003429757.1| FeS assembly protein SufD [Streptococcus gallolyticus UCN34]
gi|288731261|emb|CBI12811.1| putative FeS assembly protein SufD [Streptococcus gallolyticus
UCN34]
Length = 420
Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 176/452 (38%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S K EP W+ E RL A+ + P R+++ + D
Sbjct: 2 TKESILNFSQTKAEPLWLQERRLTAFDNIDKLPLPEINRVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+D + + LG + + +V+ +L G
Sbjct: 51 -GTISEDQALANVPDFTALGDNPK---------------LVQVGTQTVLEQLPTDLINKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E PD+++KY ++ AA ++A F + +Y+P V +
Sbjct: 95 VIFTDFYTALEEIPDIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNVEIEEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F ++ F LIIA S ++YLE + Q VE++ALD++++K+
Sbjct: 155 LFYQDKASDVPFNKHILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++R G + + W L G S
Sbjct: 215 SAIDRLGE-------NVTTYISRR-ARHGKDASVDWALGVMNEGNVIADFDSDLYGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVVAASSGRQVQGVDTRVTNYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E ++D LE
Sbjct: 387 LVIRGFLGAVITEIPVKEVRDEMIAVLDRKLE 418
>gi|254364333|ref|ZP_04980379.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|134149847|gb|EBA41892.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length = 846
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 102/259 (39%), Positives = 159/259 (61%), Gaps = 11/259 (4%)
Query: 234 IADEGSYVSY---LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ + SY++Y + CTAP + LH+AVVE++ +A ++Y+T+QNW
Sbjct: 596 VENPDSYLAYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNN 648
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN VTKR + + W GS +T KYP+ + GE + GE S+A + Q D
Sbjct: 649 VYNLVTKRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQD 707
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+G KMLHLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ +
Sbjct: 708 TGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRS 767
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPM
Sbjct: 768 DTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPM 827
Query: 471 EFAVEAQKLIDISLEGSVG 489
E+A+E +LI++ +EG+VG
Sbjct: 828 EYALELNRLIELQMEGAVG 846
Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 144/237 (60%), Gaps = 9/237 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEPDWML+ RL A R + P W
Sbjct: 29 LGRYGYGWADSDVAGANAQRGLSEAVVRDISAKKNEPDWMLQSRLKALRIFDRKPIPKWG 88
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY++LGIP E++ L
Sbjct: 89 S-NLDGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTYDRLGIPEAEKQRLV------AG 140
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHPD+ K+Y TV+P GDN ++ALN+A
Sbjct: 141 VAAQYESEVVYHQIREDLEAQGVIFLDTDTGLREHPDIFKEYFGTVIPAGDNKFSALNTA 200
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
V++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGC
Sbjct: 201 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCLPAG 257
>gi|15608599|ref|NP_215977.1| hypothetical protein Rv1461 [Mycobacterium tuberculosis H37Rv]
gi|15840921|ref|NP_335958.1| intein-containing [Mycobacterium tuberculosis CDC1551]
gi|31792655|ref|NP_855148.1| hypothetical protein Mb1496 [Mycobacterium bovis AF2122/97]
gi|121637391|ref|YP_977614.1| hypothetical protein BCG_1522 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148661253|ref|YP_001282776.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|148822680|ref|YP_001287434.1| hypothetical protein TBFG_11489 [Mycobacterium tuberculosis F11]
gi|167967411|ref|ZP_02549688.1| hypothetical protein MtubH3_04987 [Mycobacterium tuberculosis
H37Ra]
gi|215411117|ref|ZP_03419925.1| hypothetical protein Mtub9_07270 [Mycobacterium tuberculosis
94_M4241A]
gi|218753176|ref|ZP_03531972.1| hypothetical protein MtubG1_06944 [Mycobacterium tuberculosis GM
1503]
gi|224989866|ref|YP_002644553.1| hypothetical protein JTY_1497 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799490|ref|YP_003032491.1| hypothetical protein TBMG_02521 [Mycobacterium tuberculosis KZN
1435]
gi|254231696|ref|ZP_04925023.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254550477|ref|ZP_05140924.1| hypothetical protein Mtube_08452 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260186406|ref|ZP_05763880.1| hypothetical protein MtubCP_10324 [Mycobacterium tuberculosis
CPHL_A]
gi|260204743|ref|ZP_05772234.1| hypothetical protein MtubK8_10603 [Mycobacterium tuberculosis K85]
gi|289447063|ref|ZP_06436807.1| FeS assembly protein SufB [Mycobacterium tuberculosis CPHL_A]
gi|289554750|ref|ZP_06443960.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289574140|ref|ZP_06454367.1| FeS assembly protein SufB [Mycobacterium tuberculosis K85]
gi|289761619|ref|ZP_06520997.1| intein/homing endonuclease [Mycobacterium tuberculosis GM 1503]
gi|297634026|ref|ZP_06951806.1| hypothetical protein MtubK4_07882 [Mycobacterium tuberculosis KZN
4207]
gi|297731012|ref|ZP_06960130.1| hypothetical protein MtubKR_07967 [Mycobacterium tuberculosis KZN
R506]
gi|298524968|ref|ZP_07012377.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306775648|ref|ZP_07413985.1| hypothetical protein TMAG_02789 [Mycobacterium tuberculosis
SUMu001]
gi|306779469|ref|ZP_07417806.1| hypothetical protein TMBG_00013 [Mycobacterium tuberculosis
SUMu002]
gi|306784199|ref|ZP_07422521.1| hypothetical protein TMCG_03573 [Mycobacterium tuberculosis
SUMu003]
gi|306788566|ref|ZP_07426888.1| hypothetical protein TMDG_03670 [Mycobacterium tuberculosis
SUMu004]
gi|306792909|ref|ZP_07431211.1| hypothetical protein TMEG_01364 [Mycobacterium tuberculosis
SUMu005]
gi|306797287|ref|ZP_07435589.1| hypothetical protein TMFG_00554 [Mycobacterium tuberculosis
SUMu006]
gi|306803168|ref|ZP_07439836.1| hypothetical protein TMHG_00650 [Mycobacterium tuberculosis
SUMu008]
gi|306807747|ref|ZP_07444415.1| hypothetical protein TMGG_00013 [Mycobacterium tuberculosis
SUMu007]
gi|306967567|ref|ZP_07480228.1| hypothetical protein TMIG_01721 [Mycobacterium tuberculosis
SUMu009]
gi|306971757|ref|ZP_07484418.1| hypothetical protein TMJG_02895 [Mycobacterium tuberculosis
SUMu010]
gi|307079477|ref|ZP_07488647.1| hypothetical protein TMKG_01968 [Mycobacterium tuberculosis
SUMu011]
gi|307084036|ref|ZP_07493149.1| hypothetical protein TMLG_00443 [Mycobacterium tuberculosis
SUMu012]
gi|313658345|ref|ZP_07815225.1| hypothetical protein MtubKV_07987 [Mycobacterium tuberculosis KZN
V2475]
gi|54040163|sp|P67126|Y1496_MYCBO RecName: Full=UPF0051 protein Mb1496; Contains: RecName:
Full=Endonuclease PI-MtuHIIP; AltName: Full=Mtu pps1
intein
gi|54042630|sp|P67125|Y1461_MYCTU RecName: Full=UPF0051 protein Rv1461/MT1508; Contains: RecName:
Full=Endonuclease PI-MtuHIIP; AltName: Full=Mtu pps1
intein
gi|2791395|emb|CAA15991.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|13881125|gb|AAK45772.1| conserved hypothetical protein, intein-containing [Mycobacterium
tuberculosis CDC1551]
gi|31618245|emb|CAD96163.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493038|emb|CAL71509.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600755|gb|EAY59765.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|148505405|gb|ABQ73214.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|148721207|gb|ABR05832.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772979|dbj|BAH25785.1| hypothetical protein JTY_1497 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320993|gb|ACT25596.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289420021|gb|EFD17222.1| FeS assembly protein SufB [Mycobacterium tuberculosis CPHL_A]
gi|289439382|gb|EFD21875.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289538571|gb|EFD43149.1| FeS assembly protein SufB [Mycobacterium tuberculosis K85]
gi|289709125|gb|EFD73141.1| intein/homing endonuclease [Mycobacterium tuberculosis GM 1503]
gi|298494762|gb|EFI30056.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308215872|gb|EFO75271.1| hypothetical protein TMAG_02789 [Mycobacterium tuberculosis
SUMu001]
gi|308327582|gb|EFP16433.1| hypothetical protein TMBG_00013 [Mycobacterium tuberculosis
SUMu002]
gi|308331046|gb|EFP19897.1| hypothetical protein TMCG_03573 [Mycobacterium tuberculosis
SUMu003]
gi|308334865|gb|EFP23716.1| hypothetical protein TMDG_03670 [Mycobacterium tuberculosis
SUMu004]
gi|308338655|gb|EFP27506.1| hypothetical protein TMEG_01364 [Mycobacterium tuberculosis
SUMu005]
gi|308342355|gb|EFP31206.1| hypothetical protein TMFG_00554 [Mycobacterium tuberculosis
SUMu006]
gi|308345851|gb|EFP34702.1| hypothetical protein TMGG_00013 [Mycobacterium tuberculosis
SUMu007]
gi|308350152|gb|EFP39003.1| hypothetical protein TMHG_00650 [Mycobacterium tuberculosis
SUMu008]
gi|308354790|gb|EFP43641.1| hypothetical protein TMIG_01721 [Mycobacterium tuberculosis
SUMu009]
gi|308358743|gb|EFP47594.1| hypothetical protein TMJG_02895 [Mycobacterium tuberculosis
SUMu010]
gi|308362671|gb|EFP51522.1| hypothetical protein TMKG_01968 [Mycobacterium tuberculosis
SUMu011]
gi|308366320|gb|EFP55171.1| hypothetical protein TMLG_00443 [Mycobacterium tuberculosis
SUMu012]
gi|323720032|gb|EGB29143.1| hypothetical protein TMMG_00720 [Mycobacterium tuberculosis
CDC1551A]
gi|328459238|gb|AEB04661.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 846
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 102/259 (39%), Positives = 159/259 (61%), Gaps = 11/259 (4%)
Query: 234 IADEGSYVSY---LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ + SY++Y + CTAP + LH+AVVE++ +A ++Y+T+QNW
Sbjct: 596 VENPDSYLAYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNN 648
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN VTKR + + W GS +T KYP+ + GE + GE S+A + Q D
Sbjct: 649 VYNLVTKRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQD 707
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+G KMLHLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ +
Sbjct: 708 TGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRS 767
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPM
Sbjct: 768 DTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPM 827
Query: 471 EFAVEAQKLIDISLEGSVG 489
E+A+E +LI++ +EG+VG
Sbjct: 828 EYALELNRLIELQMEGAVG 846
Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 144/237 (60%), Gaps = 9/237 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEPDWML+ RL A R + P W
Sbjct: 29 LGRYGYGWADSDVAGANAQRGLSEAVVRDISAKKNEPDWMLQSRLKALRIFDRKPIPKWG 88
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY++LGIP E++ L
Sbjct: 89 S-NLDGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTYDRLGIPEAEKQRLV------AG 140
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHPD+ K+Y TV+P GDN ++ALN+A
Sbjct: 141 VAAQYESEVVYHQIREDLEAQGVIFLDTDTGLREHPDIFKEYFGTVIPAGDNKFSALNTA 200
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
V++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGC
Sbjct: 201 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCLPAG 257
>gi|226355169|ref|YP_002784909.1| FeS assembly protein SufD [Deinococcus deserti VCD115]
gi|226317159|gb|ACO45155.1| putative FeS assembly protein SufD [Deinococcus deserti VCD115]
Length = 450
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 111/462 (24%), Positives = 205/462 (44%), Gaps = 50/462 (10%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+W+ R + + + P+ + A + + D + P R
Sbjct: 14 PEWLTTKRQESLELFNALSVPT---EQVEAWKYTQV-----------EVDFDALQPHPKR 59
Query: 111 --TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +P Q+ L G V D V T +L++ GVIF + A+ +
Sbjct: 60 GVALDLAALPQSVQKRLQGTDVGAFLVLDGPD-VVYRTELPADLREKGVIFTDLKTAVEQ 118
Query: 169 HPDLVKKYLSTVVP---------------------VGDNFYAALNSAVFTDGSFVYIPKG 207
H DLV+ +L +VVP + ++AL +A++T+G+FVY+P+G
Sbjct: 119 HADLVQAHLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRG 178
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
V + L ++ ++E GT RTL++A+E + V++++ + N VELV
Sbjct: 179 VEVELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDE-QDSEDLPNTYAIGAVELVVK 237
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
A ++Y ++QNW G + + +RGD + ++ + G ++
Sbjct: 238 QGARLRYVSIQNWGKG-------VTHIQRQRGDV-ARDATLNSLVVTMGGTLSRTEMQSY 289
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
LRG+ S E ++ +N Q D T H A N S ++ KG+ G S + G + V
Sbjct: 290 LRGQGSDSEMLALYFANEDQHFDHYTLQHHAAPNAHSDLLYKGVGDGQSVGVFSGMIKVD 349
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
GA + + + +L++ + ++P +E + H +TT + +E LF+ RGI
Sbjct: 350 LGAQKTDAYQKHRTLMLSSEARNFSVPQLEINANDVRCSHGSTTGPVDEEQLFFLRSRGI 409
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+E A ++V F+ +VL ++P++ V K I+ + VG
Sbjct: 410 RKELAEKMLVTAFLEDVLARVPLQSVV---KYIEGIIAEKVG 448
>gi|215403314|ref|ZP_03415495.1| hypothetical protein Mtub0_06423 [Mycobacterium tuberculosis
02_1987]
gi|289745211|ref|ZP_06504589.1| iron-regulated ABC transporter permease [Mycobacterium tuberculosis
02_1987]
gi|294995014|ref|ZP_06800705.1| hypothetical protein Mtub2_11005 [Mycobacterium tuberculosis 210]
gi|289685739|gb|EFD53227.1| iron-regulated ABC transporter permease [Mycobacterium tuberculosis
02_1987]
gi|326903084|gb|EGE50017.1| iron-regulated ABC transporter permease [Mycobacterium tuberculosis
W-148]
Length = 846
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 102/259 (39%), Positives = 159/259 (61%), Gaps = 11/259 (4%)
Query: 234 IADEGSYVSY---LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ + SY++Y + CTAP + LH+AVVE++ +A ++Y+T+QNW
Sbjct: 596 VENPDSYLAYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNN 648
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN VTKR + + W GS +T KYP+ + GE + GE S+A + Q D
Sbjct: 649 VYNLVTKRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQD 707
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+G KMLHLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ +
Sbjct: 708 TGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRS 767
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPM
Sbjct: 768 DTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPM 827
Query: 471 EFAVEAQKLIDISLEGSVG 489
E+A+E +LI++ +EG+VG
Sbjct: 828 EYALELNRLIELQMEGAVG 846
Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 144/237 (60%), Gaps = 9/237 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEPDWML+ RL A R + P W
Sbjct: 29 LGRYGYGWADSDVAGANAQRGLSEAVVRDISAKKNEPDWMLQSRLKALRIFDRKPIPKWG 88
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY++LGIP E++ L
Sbjct: 89 S-NLDGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTYDRLGIPEAEKQRLV------AG 140
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S + +E+L+ GVIF+ + EHPD+ K+Y TV+P GDN ++ALN+A
Sbjct: 141 VAAQYESEVIYHQIREDLEAQGVIFLDTDTGLREHPDIFKEYFGTVIPAGDNKFSALNTA 200
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
V++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGC
Sbjct: 201 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCLPAG 257
>gi|125718747|ref|YP_001035880.1| ABC transporter permease [Streptococcus sanguinis SK36]
gi|125498664|gb|ABN45330.1| ABC-type Fe-S cluster assembly transporter, permease component,
putative [Streptococcus sanguinis SK36]
gi|327462871|gb|EGF09193.1| FeS assembly protein SufD [Streptococcus sanguinis SK1057]
Length = 420
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQVGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|6983946|gb|AAF34740.1|AF200327_1 unknown [Plasmodium chabaudi]
Length = 473
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 180/468 (38%), Positives = 270/468 (57%), Gaps = 15/468 (3%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 17 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 76
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 77 CPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDV 122
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 123 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYEDNFFANINSIIFS 182
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
+GSF YI K ++C LSTYF+ N QFERTL+IA E SYV YLEGCTA E+QL
Sbjct: 183 EGSFCYISKYIKCNFNLSTYFKTNSYDFAQFERTLLIASEFSYVGYLEGCTALMYKESQL 242
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H A+VE++ + +KY T+QNWY GD G GG+YNF TKRG C +K+ W Q+E GS
Sbjct: 243 HIAIVEIIVKNYGYVKYYTLQNWYRGDYLGNGGLYNFTTKRGICFY-SAKLDWIQIELGS 301
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
ITWKYPS +L+G S FYSI+ + Q D+G+K+ H+ T S I+SK IS S
Sbjct: 302 IITWKYPSTILKGNYSISNFYSISFISDTQIADTGSKIYHIGSYTKSYIISKSISLNKSL 361
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
N +RG V + + S N+T+C SL+ GNN TIPYI++ N++ ++ EA SKI
Sbjct: 362 NIFRGLVYIKPNSYRSYNYTECSSLIFGNNSLTITIPYIKNYNNTSVIKQEAFISKIEIL 421
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
+LF +QRG+ +I+LI+ GF + KLP E +E L + ++
Sbjct: 422 YLFLLMQRGLSISDSISLIIIGFCSSIYNKLPFELNLEIPILFSLKVK 469
>gi|215426799|ref|ZP_03424718.1| hypothetical protein MtubT9_10565 [Mycobacterium tuberculosis T92]
gi|215430353|ref|ZP_03428272.1| hypothetical protein MtubE_06696 [Mycobacterium tuberculosis
EAS054]
gi|219557368|ref|ZP_03536444.1| hypothetical protein MtubT1_08717 [Mycobacterium tuberculosis T17]
gi|260200518|ref|ZP_05768009.1| hypothetical protein MtubT4_10440 [Mycobacterium tuberculosis T46]
gi|289442908|ref|ZP_06432652.1| FeS assembly protein SufB [Mycobacterium tuberculosis T46]
gi|289569484|ref|ZP_06449711.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289750021|ref|ZP_06509399.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289753543|ref|ZP_06512921.1| Mtu pps1 intein [Mycobacterium tuberculosis EAS054]
gi|289415827|gb|EFD13067.1| FeS assembly protein SufB [Mycobacterium tuberculosis T46]
gi|289543238|gb|EFD46886.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289690608|gb|EFD58037.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694130|gb|EFD61559.1| Mtu pps1 intein [Mycobacterium tuberculosis EAS054]
Length = 846
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 102/259 (39%), Positives = 159/259 (61%), Gaps = 11/259 (4%)
Query: 234 IADEGSYVSY---LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ + SY++Y + CTAP + LH+AVVE++ +A ++Y+T+QNW
Sbjct: 596 VENPDSYLAYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNN 648
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN VTKR + + W GS +T KYP+ + GE + GE S+A + Q D
Sbjct: 649 VYNLVTKRARAEA-GATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQD 707
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+G KMLHLA NT+S IVSK ++ G +YRG V V++GA SR+ +CD+LL+ +
Sbjct: 708 TGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRS 767
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPM
Sbjct: 768 DTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPM 827
Query: 471 EFAVEAQKLIDISLEGSVG 489
E+A+E +LI++ +EG+VG
Sbjct: 828 EYALELNRLIELQMEGAVG 846
Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 144/237 (60%), Gaps = 9/237 (3%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEPDWML+ RL A R + P W
Sbjct: 29 LGRYGYGWADSDVAGANAQRGLSEAVVRDISAKKNEPDWMLQSRLKALRIFDRKPIPKWG 88
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY++LGIP E++ L
Sbjct: 89 S-NLDGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTYDRLGIPEAEKQRLV------AG 140
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
V A ++S V +E+L+ GVIF+ + EHPD+ K+Y TV+P GDN ++ALN+A
Sbjct: 141 VAAQYESEVVYHQIREDLEAQGVIFLDTDTGLREHPDIFKEYFGTVIPAGDNKFSALNTA 200
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
V++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y+EGC
Sbjct: 201 VWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGCLPAG 257
>gi|322376419|ref|ZP_08050912.1| FeS assembly protein SufD [Streptococcus sp. M334]
gi|321282226|gb|EFX59233.1| FeS assembly protein SufD [Streptococcus sp. M334]
Length = 420
Score = 286 bits (732), Expect = 5e-75, Method: Composition-based stats.
Identities = 87/451 (19%), Positives = 176/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKETIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFAQIPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+LV+++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELVEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHIMIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|332359814|gb|EGJ37628.1| FeS assembly protein SufD [Streptococcus sanguinis SK1056]
Length = 420
Score = 286 bits (732), Expect = 5e-75, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQLGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|306830530|ref|ZP_07463698.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304427324|gb|EFM30428.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 430
Score = 286 bits (732), Expect = 6e-75, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 176/452 (38%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S K EP W+ E RL A+ + P R+++ + D
Sbjct: 12 TKESILNFSQTKAEPLWLQERRLTAFDNIDKLPLPEINRVKFHRWNLGD----------- 60
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+D + + LG + + +V+ +L G
Sbjct: 61 -GTISEDQALANVPDFTALGDNPK---------------LVQVGTQTVLEQLPTDLINKG 104
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E PD+++KY ++ AA ++A F + +Y+P V +
Sbjct: 105 VIFTDFYTALEEIPDIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNVEIEEPIEG 164
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F ++ F LIIA S ++YLE + Q VE++ALD++++K+
Sbjct: 165 LFYQDKASDVPFNKHILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQVKF 224
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++R G + + W L G S
Sbjct: 225 SAIDRLGE-------NVTTYISRR-ARHGKDASVDWALGVMNEGNVIADFDSDLYGNGSH 276
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 277 ANLKVVAASSGRQVQGVDTRVTNYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGAD 336
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 337 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAER 396
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E ++D LE
Sbjct: 397 LVIRGFLGAVITEIPVKEVRDEMIAVLDRKLE 428
>gi|322392115|ref|ZP_08065577.1| FeS assembly protein SufD [Streptococcus peroris ATCC 700780]
gi|321145015|gb|EFX40414.1| FeS assembly protein SufD [Streptococcus peroris ATCC 700780]
Length = 420
Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 178/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ E R A+ + +++ P+ R+++ + D
Sbjct: 2 TKETIKLFSELHAEPSWLSELRQKAFDKIESLELPAIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + IP + +V EL + G
Sbjct: 51 ---------GTITESEPSTNIP-------DFTALDNHLKLVQVGTQTVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+++K++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPEIIKEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LI+A + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIVAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIAVMNEGNVIADFDSDLLGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +IA+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKAIALSSGRQIQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|332366183|gb|EGJ43938.1| FeS assembly protein SufD [Streptococcus sanguinis SK355]
Length = 420
Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALEDNLK---------------LVQVGTQTVLEQLPADLADQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VVFTDFHSALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGAVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|325977507|ref|YP_004287223.1| iron-sulfur ABC transporter [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325177435|emb|CBZ47479.1| iron-sulfur ABC superfamily ATP binding cassette transporter
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 431
Score = 286 bits (731), Expect = 7e-75, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 176/452 (38%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S K EP W+ E RL A+ + P R+++ + D
Sbjct: 13 TKESILNFSQTKAEPLWLQERRLTAFDNIDKLPLPEINRVKFHRWNLGD----------- 61
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+D + + LG + + +V+ +L G
Sbjct: 62 -GTISEDQALANVPDFTALGDNPK---------------LVQVGTQTVLEQLPTDLINKG 105
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E PD+++KY ++ AA ++A F + +Y+P V +
Sbjct: 106 VIFTDFYTALEEIPDIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNVEIEEPIEG 165
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F ++ F LIIA S ++YLE + Q VE++ALD++++K+
Sbjct: 166 LFYQDKASDVPFNKHILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQVKF 225
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++R G + + W L G S
Sbjct: 226 SAIDRLGE-------NVTTYISRR-ARHGKDASVDWALGVMNEGNVIADFDSDLYGNGSH 277
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 278 ANLKVVAASSGRQVQGVDTRVTNYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGAD 337
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 338 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAER 397
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E ++D LE
Sbjct: 398 LVIRGFLGAVITEIPVKEVRDEMIAVLDRKLE 429
>gi|324992348|gb|EGC24269.1| FeS assembly protein SufD [Streptococcus sanguinis SK405]
gi|324996129|gb|EGC28040.1| FeS assembly protein SufD [Streptococcus sanguinis SK678]
gi|327460577|gb|EGF06912.1| FeS assembly protein SufD [Streptococcus sanguinis SK1]
gi|327488934|gb|EGF20731.1| FeS assembly protein SufD [Streptococcus sanguinis SK1058]
Length = 420
Score = 286 bits (731), Expect = 7e-75, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALEDNLK---------------LVQVGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|298246144|ref|ZP_06969950.1| SufBD protein [Ktedonobacter racemifer DSM 44963]
gi|297553625|gb|EFH87490.1| SufBD protein [Ktedonobacter racemifer DSM 44963]
Length = 485
Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats.
Identities = 104/461 (22%), Positives = 197/461 (42%), Gaps = 36/461 (7%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRY------PAIDFDDLYY 88
G +D + +S +K EP+WML+ RL A+ + P R F +L
Sbjct: 8 GFTKDALLELSRQKGEPEWMLQKRLQAWEHYEQTPAPLGRRGDLGTLQNLSRFKFQELKP 67
Query: 89 YAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTF 148
+ P + P + ++ ++ + + + +S V
Sbjct: 68 FV-------PAPDTALPPAIQQSLQESLVNE------------RSGLIVQHNSSVVYIHL 108
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
+ELK GVI + A+ E+P+LV+++ VPV + Y AL++A +T G F+Y+P G
Sbjct: 109 NDELKAQGVILTDLETAVREYPELVQEHFMTKCVPVTASKYTALHAAFWTGGFFLYVPSG 168
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL-HAAVVELVA 266
V + ++ + F +L+I + S +++ T+ E+ + VVE++A
Sbjct: 169 VEIEAPILAQVWVDSSASAIFSHSLVITESQSSTRFVQEFTSSVEAEHPSLVSDVVEVIA 228
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
A +++S +Q+ +T + + +++ + G+ +
Sbjct: 229 KREAMVEFSNLQDLDQHTW--------LITNKNAMHENDASVTFVMADLGAQLNLNTIGA 280
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L+G E I ++ Q+ T H+ +T + + KG+ S + G + +
Sbjct: 281 GLQGNGCAAELVGIFFTDHNQRYAINTLSDHVGVSTNAETMIKGVLTDESRVEFDGMIRI 340
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
H+ A + +F LL+ IP +E + + H ATT +I +E LFY + RG
Sbjct: 341 HKNAQQTASFLAAHGLLLSKKARGEFIPGLEIAANDVSASHGATTGQIDEEQLFYLMVRG 400
Query: 447 IPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLEG 486
I A +IV GF VLQ++P+E + ++ I + G
Sbjct: 401 IARPEAERIIVQGFFEPVLQRIPLENLRIRLRRSIISRMSG 441
>gi|332365491|gb|EGJ43251.1| FeS assembly protein SufD [Streptococcus sanguinis SK1059]
Length = 420
Score = 285 bits (730), Expect = 1e-74, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQVGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+L++K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHSALEEIPELLEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|325697559|gb|EGD39445.1| FeS assembly protein SufD [Streptococcus sanguinis SK160]
Length = 420
Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALEDNLK---------------LVQVGTQTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHSALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|325686785|gb|EGD28810.1| FeS assembly protein SufD [Streptococcus sanguinis SK72]
Length = 420
Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALEDNLK---------------LVQVGTQTVLEQLPADLVAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VVFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDGESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|240171376|ref|ZP_04750035.1| hypothetical protein MkanA1_18836 [Mycobacterium kansasii ATCC
12478]
Length = 839
Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats.
Identities = 102/259 (39%), Positives = 159/259 (61%), Gaps = 11/259 (4%)
Query: 234 IADEGSYVSY---LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ + SY++Y + CTAP + LH+AVVE++ +A ++Y+T+QNW
Sbjct: 589 VEEPDSYLAYGFAVHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNW-------SNN 641
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN VTKR + + W GS +T KYP+ + GE + GE S+A + Q D
Sbjct: 642 VYNLVTKRARAEA-GATMEWVDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQD 700
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+G KMLHLA NT+S IVSK ++ G +YRG V V++GA S++ +CD+LL+ +
Sbjct: 701 TGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSKSSVKCDALLVDTISRS 760
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T PY++ + + HEAT SK+S+ LFY + RG+ E+ A+A++V GFV + ++LPM
Sbjct: 761 DTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGMTEDEAMAMVVRGFVEPIAKELPM 820
Query: 471 EFAVEAQKLIDISLEGSVG 489
E+A+E +LI++ +EGSVG
Sbjct: 821 EYALELNRLIELQMEGSVG 839
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 101/248 (40%), Positives = 146/248 (58%), Gaps = 10/248 (4%)
Query: 6 ETVDKVRKI-DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYR 63
E + + I + +Y YG+ ++ A +GL+E ++R ISAKKNEP+WML+ RL A R
Sbjct: 11 EPLTQAEAIASLSRYGYGWVDSDVAGASAQRGLSEAVVRDISAKKNEPEWMLQNRLKALR 70
Query: 64 RWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQE 123
+ P W IDFD++ Y+ DD+ ++ TY++LGIP E++
Sbjct: 71 IFERKPMPRWGS-NLEGIDFDNIKYFVRSTEKQAAS-WDDLPEDIKNTYDRLGIPEAEKQ 128
Query: 124 ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV 183
L V A ++S V +E+L+ GVIF+ + EHP++ K+Y TV+P
Sbjct: 129 RLV------AGVAAQYESEVVYHQIREDLESQGVIFLDTDTGLREHPEVFKQYFGTVIPA 182
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
GDN ++ALN+AV++ GSF+Y+P GV + L YFRIN + GQFERTLIIADEGSYV Y
Sbjct: 183 GDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHY 242
Query: 244 LEGCTAPQ 251
+EGC
Sbjct: 243 VEGCVPAG 250
>gi|324989896|gb|EGC21838.1| FeS assembly protein SufD [Streptococcus sanguinis SK353]
Length = 420
Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQVGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VVFTDFHTALEEIPVLVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|322373790|ref|ZP_08048325.1| FeS assembly protein SufD [Streptococcus sp. C150]
gi|321277162|gb|EFX54232.1| FeS assembly protein SufD [Streptococcus sp. C150]
Length = 420
Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 85/451 (18%), Positives = 178/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S K EP W+ + R A+ + ++ P R+++ + D
Sbjct: 2 SKESIIAFSQAKAEPLWLQDLRQSAFDKLESLGLPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + LG + + +V+ +L G
Sbjct: 51 -GTLTENEPSANVPDFTALGNNPK---------------LVQVGTNTVLEQLPADLISQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F ++ A+ E P++V+ + V ++ AA N A F + +Y+P V + +
Sbjct: 95 VVFTDLTTALEEIPEVVEAFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEVDLPVEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
YF + F LIIA + S ++YLE + VE++A D A++K+
Sbjct: 155 YFYQDGTSNVPFNKHILIIAGKNSKLTYLERFETLGEATEKASANISVEVIAQDGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + + W L G+ S
Sbjct: 215 AAIDRLGE-------NVTTYISRRGRI-GRDASLDWALGIMNEGNVIADFDSDLIGDGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
I +S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHILQHGVILERGTLTFNGIGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E E + D L
Sbjct: 387 LVIRGFLGAVITEIPVKEVRDEMISVTDTKL 417
>gi|325689086|gb|EGD31094.1| FeS assembly protein SufD [Streptococcus sanguinis SK115]
Length = 420
Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++IR S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIREFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQLGTQTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHSTLEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|327468254|gb|EGF13739.1| FeS assembly protein SufD [Streptococcus sanguinis SK330]
Length = 420
Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDEIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQLGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + + W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMVDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|323350410|ref|ZP_08086073.1| FeS assembly protein SufD [Streptococcus sanguinis VMC66]
gi|322123347|gb|EFX95025.1| FeS assembly protein SufD [Streptococcus sanguinis VMC66]
Length = 420
Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDEIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQLGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|327472305|gb|EGF17736.1| FeS assembly protein SufD [Streptococcus sanguinis SK408]
Length = 420
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 177/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDEIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+++ + + +V+ +L G
Sbjct: 51 ----------------DRISESEPLTSVPDFTALDDNLKLVQLGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+LV+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|55820263|ref|YP_138705.1| hypothetical protein stu0165 [Streptococcus thermophilus LMG 18311]
gi|55822153|ref|YP_140594.1| hypothetical protein str0165 [Streptococcus thermophilus CNRZ1066]
gi|38679244|gb|AAR26258.1| SufD [Streptococcus thermophilus]
gi|55736248|gb|AAV59890.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738138|gb|AAV61779.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|312277585|gb|ADQ62242.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus thermophilus ND03]
Length = 420
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 83/451 (18%), Positives = 174/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S K EP W+ + R A+ + ++ P R+++ + D
Sbjct: 2 SKESIIAFSQAKAEPLWLQDLRQAAFDKLDSLALPKIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V+ +L G
Sbjct: 51 ----------------GTIAENESSANVPDFTALGNNPKLVQVGTNTVLEQLPSDLINQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
++F ++ A+ E P++V+ + V ++ AA N A F + +Y+P V + + +
Sbjct: 95 LVFTDLATALEEIPEVVESFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVES 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
YF + + F LI+A + S ++YLE + VE++A D A++K+
Sbjct: 155 YFYQDGDSSVPFNKHVLIVAGKNSKLTYLERFETLGESTEKASANISVEVIAQDGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTTYISRRGRI-GRDASIDWALGIMNEGNVIADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
I +S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHILQHGVILERGTLTFNGIGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E E + D L
Sbjct: 387 LVIRGFLGAVITEIPVKEVRDEMISVTDTKL 417
>gi|312864030|ref|ZP_07724266.1| FeS assembly protein SufD [Streptococcus vestibularis F0396]
gi|311100443|gb|EFQ58650.1| FeS assembly protein SufD [Streptococcus vestibularis F0396]
Length = 420
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 85/451 (18%), Positives = 178/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S K EP W+ + R A+ + ++ P R+++ + D
Sbjct: 2 SKESIIAFSQAKAEPLWLQDLRQAAFDKLDSLALPKIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + LG + + +V+ +L G
Sbjct: 51 -GTIAENEPSANVPDFTALGNNPK---------------LVQVGTNTVLEQLPADLISQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F ++ A+ E P++V+ + V ++ AA N A F + +Y+P V + + +
Sbjct: 95 VVFTDLTTALEEIPEVVEAFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVES 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
YF + F LI+A + S ++YLE + VE++A D A++K+
Sbjct: 155 YFYQDGTSNVPFNKHVLIVAGKNSKLTYLERFETLGEATEKASANISVEVIAQDGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTTYISRRGRI-GRDASIDWALGIMNEGNVIADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
I +S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHILQHGVILERGTLTFNGIGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E E + D L
Sbjct: 387 LVIRGFLGAVITEIPVKEVRDEMISVTDTKL 417
>gi|319945580|ref|ZP_08019832.1| FeS assembly protein SufD [Streptococcus australis ATCC 700641]
gi|319748179|gb|EFW00421.1| FeS assembly protein SufD [Streptococcus australis ATCC 700641]
Length = 420
Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats.
Identities = 88/451 (19%), Positives = 175/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + ++ P R+++ + D +I
Sbjct: 2 TKENIKLFSEMHAEPQWLQDLRQKAFDKIDDLELPVIERVKFHRWNLGD-------GTIT 54
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L V + +V +L G
Sbjct: 55 ESEPLTAVPD--------------------FTAIDNQLKLVQHGTHTVFEQIPVDLANQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ P++V+++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VIFTDFHSALEVIPEVVEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDHVEIAEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LIIA + S +SYLE + + VE++A A++K+
Sbjct: 155 VFYQDSDSDVPFNKHILIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGKDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSVGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDQATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVREEMIQTIEDKL 417
>gi|307704669|ref|ZP_07641569.1| feS assembly protein SufD [Streptococcus mitis SK597]
gi|307621778|gb|EFO00815.1| feS assembly protein SufD [Streptococcus mitis SK597]
Length = 420
Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats.
Identities = 87/451 (19%), Positives = 177/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQIPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
+IF A+ E P+LV+++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 IIFTDFHSALEEIPELVEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIAEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHIMIIAGKNSKISYLERLESRGQGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|332359196|gb|EGJ37017.1| FeS assembly protein SufD [Streptococcus sanguinis SK49]
Length = 420
Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALDDNLK---------------LVQLGTHTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+LV+K+ + V ++ AA ++A F GS +Y+P V +
Sbjct: 95 VVFTDFHTALEEIPELVEKHFMSAVKYDEDKLAAYHTAYFNSGSVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKMTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|257421961|ref|ZP_05598951.1| FeS assembly protein sufD [Enterococcus faecalis X98]
gi|257163785|gb|EEU93745.1| FeS assembly protein sufD [Enterococcus faecalis X98]
gi|315155329|gb|EFT99345.1| FeS assembly protein SufD [Enterococcus faecalis TX0043]
Length = 428
Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 177/453 (39%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ E+P+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEYPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + N++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTNYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|315166411|gb|EFU10428.1| FeS assembly protein SufD [Enterococcus faecalis TX1341]
Length = 428
Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPSSLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|312867908|ref|ZP_07728112.1| FeS assembly protein SufD [Streptococcus parasanguinis F0405]
gi|311096312|gb|EFQ54552.1| FeS assembly protein SufD [Streptococcus parasanguinis F0405]
Length = 420
Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats.
Identities = 86/451 (19%), Positives = 168/451 (37%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + I S EP W+ + R A+ + ++ P+ R+++ + D
Sbjct: 2 SIENITLFSELHAEPSWLQDLRKKAFDKIDQLELPAIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V + L G
Sbjct: 51 ----------------GTITESEASANVPDFTALDSNLKLVQVGTQTVFEQVPQALADQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P +V+ Y + V D+ AA ++A F G+ +Y+P V +
Sbjct: 95 VLFTDFHTALEEIPQVVEDYFMSSVKYDDDKLAAYHTAYFNSGAVLYVPDNVEISEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKY 274
F + F LIIA + S SYLE + A V E++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKFSYLERLESKGEGSATATANVTVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGQDASIDWAIGVMNEGNVVADFDSDLVGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNFGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDQHTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|116627117|ref|YP_819736.1| hypothetical protein STER_0219 [Streptococcus thermophilus LMD-9]
gi|116100394|gb|ABJ65540.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus thermophilus LMD-9]
Length = 420
Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats.
Identities = 83/451 (18%), Positives = 173/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S K EP W+ + R A+ + + P R+++ + D
Sbjct: 2 SKESIIAFSQAKAEPLWLQDLRQAAFDKLDGLALPKIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V+ +L G
Sbjct: 51 ----------------GTIAENESSANVPDFTALGNNPKLVQVGTNTVLEQLPSDLINQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
++F ++ A+ E P++V+ + V ++ AA N A F + +Y+P V + + +
Sbjct: 95 LVFTDLATALEEIPEVVESFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVES 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
YF + + F LI+A + S ++YLE + VE++A D A++K+
Sbjct: 155 YFYQDGDSSVPFNKHVLIVAGKNSKLTYLERFETLGESTEKASANISVEVIAQDGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTTYISRRGRI-GRDASIDWALGIMNEGNVIADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
I +S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHILQHGVILERGTLTFNGIGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E E + D L
Sbjct: 387 LVIRGFLGAVITEIPVKEVRDEMISVTDTKL 417
>gi|328944935|gb|EGG39093.1| FeS assembly protein SufD [Streptococcus sanguinis SK1087]
Length = 420
Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++I+ S EPDW+ + R A+ + ++ P R+++ + D
Sbjct: 2 TKELIQEFSQLHAEPDWLFQLRQQAFDKIDQLELPRIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + L ++ + +V+ +L G
Sbjct: 51 -GRISESEPLTSVPDFTALEDNLK---------------LVQVGTQTVLEQLPADLAAQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+ V+K+ + V ++ AA ++A F G+ +Y+P V +
Sbjct: 95 VIFTDFHSALEEIPEHVEKHFMSAVKYDEDKLAAYHTAYFNSGAVLYVPDNVEIDQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + + F LIIA + S V+YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKVNYLERLETYGEGSVPVTANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSSGKQVQGIDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + IDI L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIENIDIIL 417
>gi|228476461|ref|ZP_04061151.1| FeS assembly protein SufD [Streptococcus salivarius SK126]
gi|228251882|gb|EEK10928.1| FeS assembly protein SufD [Streptococcus salivarius SK126]
Length = 420
Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats.
Identities = 85/451 (18%), Positives = 177/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S K EP W+ + R A+ + ++ P R+++ + D
Sbjct: 2 SKESIIAFSQAKAEPLWLQDLRQAAFDKIESLALPKIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + LG + + +V+ +L G
Sbjct: 51 -GTITENEPSANVPDFTALGNNPK---------------LVQVGTNTVLEQLPADLISQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F ++ A+ E P++V+ + V ++ AA N A F + +Y+P V + + +
Sbjct: 95 VVFTDLTTALEEIPEVVEAFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVES 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
YF F LI+A + S ++YLE + VE++A D A++K+
Sbjct: 155 YFYQEGTSNVSFNKHVLIVAGKNSKLTYLERFETLGEATEKASANISVEVIAQDGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTTYISRRGRI-GRDASIDWALGIMNEGNVIADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
I +S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHILQHGVILERGTLTFNGIGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E E + D L
Sbjct: 387 LVIRGFLGAVITEIPVKEVRDEMISVTDTKL 417
>gi|319939698|ref|ZP_08014057.1| FeS assembly protein SufD [Streptococcus anginosus 1_2_62CV]
gi|319811287|gb|EFW07593.1| FeS assembly protein SufD [Streptococcus anginosus 1_2_62CV]
Length = 420
Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 173/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP+W++ R A+ + ++ P R+++ + D
Sbjct: 2 TKETIKHFSQMHAEPEWLVNLRQAAFDKIDKLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L + + + +V+ EL + G
Sbjct: 51 ----------------GTLSESEVLANVPDFTALNDHLTLVQVGTQTVLEQLPTELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P++++KY + V ++ AA ++A F G+ +YIP V +
Sbjct: 95 VIFTDFYTALEEIPEIMEKYFMSSVKYDEDKLAAYHTAYFNSGAVLYIPDNVEINQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEIKY 274
F + + F LIIA + S +YLE + VE++A A+IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKFTYLERLETYGSGSLSATANITVEVIAQAGAQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG S I W L G S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGK-LDDDSMIDWAIGVMNEGNVIADFDSDLFGRGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S G Q +++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSRGKQIQGIDSRITNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E + ID L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRAEMIENIDEIL 417
>gi|255972136|ref|ZP_05422722.1| FeS assembly protein SufD [Enterococcus faecalis T1]
gi|255963154|gb|EET95630.1| FeS assembly protein SufD [Enterococcus faecalis T1]
Length = 422
Score = 283 bits (724), Expect = 5e-74, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 4 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 56
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 57 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 95
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 96 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 155
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 156 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 215
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 216 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 267
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 268 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 327
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 328 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 387
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 388 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 420
>gi|29376890|ref|NP_816044.1| hypothetical protein EF2393 [Enterococcus faecalis V583]
gi|227553927|ref|ZP_03983974.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis HH22]
gi|229549432|ref|ZP_04438157.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis ATCC 29200]
gi|256956673|ref|ZP_05560844.1| FeS assembly protein SufD [Enterococcus faecalis DS5]
gi|257416634|ref|ZP_05593628.1| FeS assembly protein SufD [Enterococcus faecalis AR01/DG]
gi|300861206|ref|ZP_07107293.1| FeS assembly protein SufD [Enterococcus faecalis TUSoD Ef11]
gi|312899825|ref|ZP_07759144.1| FeS assembly protein SufD [Enterococcus faecalis TX0470]
gi|312953475|ref|ZP_07772315.1| FeS assembly protein SufD [Enterococcus faecalis TX0102]
gi|29344355|gb|AAO82114.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227176913|gb|EEI57885.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis HH22]
gi|229305669|gb|EEN71665.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis ATCC 29200]
gi|256947169|gb|EEU63801.1| FeS assembly protein SufD [Enterococcus faecalis DS5]
gi|257158462|gb|EEU88422.1| FeS assembly protein SufD [Enterococcus faecalis ARO1/DG]
gi|300850245|gb|EFK77995.1| FeS assembly protein SufD [Enterococcus faecalis TUSoD Ef11]
gi|310628684|gb|EFQ11967.1| FeS assembly protein SufD [Enterococcus faecalis TX0102]
gi|311293075|gb|EFQ71631.1| FeS assembly protein SufD [Enterococcus faecalis TX0470]
gi|315032887|gb|EFT44819.1| FeS assembly protein SufD [Enterococcus faecalis TX0017]
gi|315035628|gb|EFT47560.1| FeS assembly protein SufD [Enterococcus faecalis TX0027]
gi|315152142|gb|EFT96158.1| FeS assembly protein SufD [Enterococcus faecalis TX0031]
gi|315159095|gb|EFU03112.1| FeS assembly protein SufD [Enterococcus faecalis TX0312]
gi|315170308|gb|EFU14325.1| FeS assembly protein SufD [Enterococcus faecalis TX1342]
gi|315574372|gb|EFU86563.1| FeS assembly protein SufD [Enterococcus faecalis TX0309B]
gi|315580153|gb|EFU92344.1| FeS assembly protein SufD [Enterococcus faecalis TX0309A]
Length = 428
Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|297622510|ref|YP_003703944.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
gi|297163690|gb|ADI13401.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
Length = 437
Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats.
Identities = 101/450 (22%), Positives = 196/450 (43%), Gaps = 29/450 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ +++ I + EP W+ R A+R + + P+ R A + L ++
Sbjct: 7 LSPELVEGIIQQHEEPAWLASERRAAWRTFEALPWPT---NRDEAWRYTQLERFSLAGLE 63
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ D E + + I + E G K DS +LK++
Sbjct: 64 LVTAPRDRAVSERI----TMRITDSDAE---GALVYKGGEAIYRDS---------KLKEA 107
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GVIF + A+ EH LV+ +L +VV + YAAL++A++ +G+F+++PK + L
Sbjct: 108 GVIFTDLRTALKEHEALVRAHLYSVVNATQSKYAALSAALWQNGTFLFVPKNTEVKLPLG 167
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + G RTLI+ + ++ ++++ T+ + E + VE++ D A+++Y
Sbjct: 168 AFHTADAGGL-TAPRTLIVLEPNAHATFIDEYTSDEFGERLFASGSVEIILQDGAKLRYV 226
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++QNW V++ S++ + G+ C++ G S
Sbjct: 227 SLQNWS--------RTVAHVSRIRAHLERNSRLESLTVSLGADAARAEVECVMAGPGSES 278
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E + ++ Q + T H A + S ++ KG S Y G + V GA +
Sbjct: 279 EMLGLYFADKGQHFNQYTLQHHAADHAHSDLLFKGALRDASTAVYSGLIQVDEGAQKTDA 338
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ +LL+ A +IP +E + H +T S + ++ FY + RG+ E A +
Sbjct: 339 YQTNRNLLLDAASEAVSIPQLEIGANDVRCSHGSTVSPVPEDQRFYLMSRGLRPEVAEHV 398
Query: 456 IVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
+V GF+ EV ++ + E ++++ L
Sbjct: 399 LVTGFLHEVTSRVTLPKVAEYVERVVQAKL 428
>gi|227519886|ref|ZP_03949935.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX0104]
gi|229545184|ref|ZP_04433909.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX1322]
gi|256853756|ref|ZP_05559121.1| FeS assembly protein SufD [Enterococcus faecalis T8]
gi|256961310|ref|ZP_05565481.1| FeS assembly protein SufD [Enterococcus faecalis Merz96]
gi|257082026|ref|ZP_05576387.1| FeS assembly protein SufD [Enterococcus faecalis E1Sol]
gi|257084577|ref|ZP_05578938.1| FeS assembly protein SufD [Enterococcus faecalis Fly1]
gi|257087427|ref|ZP_05581788.1| FeS assembly protein SufD [Enterococcus faecalis D6]
gi|293383595|ref|ZP_06629505.1| FeS assembly protein SufD [Enterococcus faecalis R712]
gi|293387292|ref|ZP_06631849.1| FeS assembly protein SufD [Enterococcus faecalis S613]
gi|307287725|ref|ZP_07567768.1| FeS assembly protein SufD [Enterococcus faecalis TX0109]
gi|307290553|ref|ZP_07570465.1| FeS assembly protein SufD [Enterococcus faecalis TX0411]
gi|312906145|ref|ZP_07765157.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 512]
gi|312909490|ref|ZP_07768345.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 516]
gi|227072680|gb|EEI10643.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX0104]
gi|229309729|gb|EEN75716.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis TX1322]
gi|256710699|gb|EEU25742.1| FeS assembly protein SufD [Enterococcus faecalis T8]
gi|256951806|gb|EEU68438.1| FeS assembly protein SufD [Enterococcus faecalis Merz96]
gi|256990056|gb|EEU77358.1| FeS assembly protein SufD [Enterococcus faecalis E1Sol]
gi|256992607|gb|EEU79909.1| FeS assembly protein SufD [Enterococcus faecalis Fly1]
gi|256995457|gb|EEU82759.1| FeS assembly protein SufD [Enterococcus faecalis D6]
gi|291079107|gb|EFE16471.1| FeS assembly protein SufD [Enterococcus faecalis R712]
gi|291083329|gb|EFE20292.1| FeS assembly protein SufD [Enterococcus faecalis S613]
gi|306498408|gb|EFM67913.1| FeS assembly protein SufD [Enterococcus faecalis TX0411]
gi|306501463|gb|EFM70766.1| FeS assembly protein SufD [Enterococcus faecalis TX0109]
gi|310627791|gb|EFQ11074.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 512]
gi|311290163|gb|EFQ68719.1| FeS assembly protein SufD [Enterococcus faecalis DAPTO 516]
gi|315025418|gb|EFT37350.1| FeS assembly protein SufD [Enterococcus faecalis TX2137]
gi|315030227|gb|EFT42159.1| FeS assembly protein SufD [Enterococcus faecalis TX4000]
gi|315144764|gb|EFT88780.1| FeS assembly protein SufD [Enterococcus faecalis TX2141]
gi|315164824|gb|EFU08841.1| FeS assembly protein SufD [Enterococcus faecalis TX1302]
Length = 428
Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|255975203|ref|ZP_05425789.1| FeS assembly protein SufD [Enterococcus faecalis T2]
gi|255968075|gb|EET98697.1| FeS assembly protein SufD [Enterococcus faecalis T2]
Length = 422
Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 177/453 (39%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 4 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 56
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q ++ S L +
Sbjct: 57 ---------------------YVPSEGNVASFDQMKDNSLIVQQGSFHAFEQLPASLAEQ 95
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 96 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 155
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 156 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 215
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 216 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 267
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 268 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 327
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 328 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 387
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 388 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 420
>gi|307285822|ref|ZP_07565956.1| FeS assembly protein SufD [Enterococcus faecalis TX0860]
gi|306502583|gb|EFM71850.1| FeS assembly protein SufD [Enterococcus faecalis TX0860]
Length = 428
Score = 283 bits (723), Expect = 6e-74, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 177/453 (39%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q ++ S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNSLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|322517570|ref|ZP_08070439.1| FeS assembly protein SufD [Streptococcus vestibularis ATCC 49124]
gi|322123830|gb|EFX95404.1| FeS assembly protein SufD [Streptococcus vestibularis ATCC 49124]
Length = 420
Score = 283 bits (723), Expect = 6e-74, Method: Composition-based stats.
Identities = 82/451 (18%), Positives = 173/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+++ I S K EP W+ + R A+ + ++ P R+++ + +
Sbjct: 2 SKESIIAFSQAKAEPLWLQDLRQAAFDKLDSLALPKIERVKFHRWNLGN----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V+ +L G
Sbjct: 51 ----------------GTIAENESSANVPDFTALGNNPKLVQVGTNTVLEQLPADLISQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F ++ A+ E P++V+ + V ++ AA N A F + +Y+P V + + +
Sbjct: 95 VVFTDLTTALEEIPEVVESFFGKAVAYDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVES 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
YF + F LI+A + S ++YLE + VE++A D A++K+
Sbjct: 155 YFYQDGTSNVPFNKHVLIVAGKNSKLTYLERFETLGEATEKASANISVEVIAQDGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTTYISRRGRI-GRDASIDWALGIMNEGNVIADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
I +S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHILQHGVILERGTLTFNGIGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E E + D L
Sbjct: 387 LVIRGFLGAVITEIPVKEVRDEMISVTDTKL 417
>gi|256617049|ref|ZP_05473895.1| FeS assembly protein SufD [Enterococcus faecalis ATCC 4200]
gi|256963562|ref|ZP_05567733.1| FeS assembly protein SufD [Enterococcus faecalis HIP11704]
gi|257079628|ref|ZP_05573989.1| FeS assembly protein SufD [Enterococcus faecalis JH1]
gi|294780908|ref|ZP_06746262.1| FeS assembly protein SufD [Enterococcus faecalis PC1.1]
gi|307270849|ref|ZP_07552136.1| FeS assembly protein SufD [Enterococcus faecalis TX4248]
gi|307271501|ref|ZP_07552773.1| FeS assembly protein SufD [Enterococcus faecalis TX0855]
gi|307277171|ref|ZP_07558275.1| FeS assembly protein SufD [Enterococcus faecalis TX2134]
gi|256596576|gb|EEU15752.1| FeS assembly protein SufD [Enterococcus faecalis ATCC 4200]
gi|256954058|gb|EEU70690.1| FeS assembly protein SufD [Enterococcus faecalis HIP11704]
gi|256987658|gb|EEU74960.1| FeS assembly protein SufD [Enterococcus faecalis JH1]
gi|294452034|gb|EFG20482.1| FeS assembly protein SufD [Enterococcus faecalis PC1.1]
gi|295113450|emb|CBL32087.1| FeS assembly protein SufD, group 1 [Enterococcus sp. 7L76]
gi|306506101|gb|EFM75267.1| FeS assembly protein SufD [Enterococcus faecalis TX2134]
gi|306511773|gb|EFM80771.1| FeS assembly protein SufD [Enterococcus faecalis TX0855]
gi|306512762|gb|EFM81407.1| FeS assembly protein SufD [Enterococcus faecalis TX4248]
gi|315161688|gb|EFU05705.1| FeS assembly protein SufD [Enterococcus faecalis TX0645]
gi|323481385|gb|ADX80824.1| FeS assembly protein SufD [Enterococcus faecalis 62]
Length = 428
Score = 283 bits (723), Expect = 6e-74, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 175/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A + I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPYSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|315146671|gb|EFT90687.1| FeS assembly protein SufD [Enterococcus faecalis TX4244]
Length = 428
Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ E+P+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEYPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|257419850|ref|ZP_05596844.1| FeS assembly protein sufD [Enterococcus faecalis T11]
gi|257161678|gb|EEU91638.1| FeS assembly protein sufD [Enterococcus faecalis T11]
Length = 428
Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNKPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|322390978|ref|ZP_08064484.1| FeS assembly protein SufD [Streptococcus parasanguinis ATCC 903]
gi|321142353|gb|EFX37825.1| FeS assembly protein SufD [Streptococcus parasanguinis ATCC 903]
Length = 420
Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats.
Identities = 86/451 (19%), Positives = 168/451 (37%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + I S EP W+ + R A+ + ++ P+ R+++ + D
Sbjct: 2 SIEKITLFSELHAEPSWLQDLRKKAFDKIDQLELPAIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V + L G
Sbjct: 51 ----------------GTITESEASANVPDFTALDSNLKLVQVGTQTVFEQVPQALADQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P +V+ Y + V D+ AA ++A F G+ +Y+P V +
Sbjct: 95 VLFTDFHSALEEIPQVVEDYFMSSVKYDDDKLAAYHTAYFNSGAVLYVPDNVEISEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKY 274
F + F LIIA + S SYLE + A V E++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKFSYLERLESKGEGSATATANVTVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGQDASIDWAIGVMNEGNVVADFDSDLVGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNFGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDQHTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|156938007|ref|YP_001435803.1| SufBD protein [Ignicoccus hospitalis KIN4/I]
gi|156566991|gb|ABU82396.1| SufBD protein [Ignicoccus hospitalis KIN4/I]
Length = 438
Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats.
Identities = 121/447 (27%), Positives = 205/447 (45%), Gaps = 21/447 (4%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL 101
IS K EP+W L RL A + + P W DFD + A +
Sbjct: 12 EEISKKLKEPEWALRLRLKAAELYPKVPAPPWMPE-----DFDLEAFAAKAAEEEFVKPG 66
Query: 102 D-DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ ++ E++G+P EQ LAG V + + V K +L + GVI
Sbjct: 67 EGEIPDWYKALLERIGVPDIEQSALAG-------VTVMVNENVVYEAQKRDLMRKGVILK 119
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
+ EA+ EH + VK+ L + + AAL++A+ G+F+Y+P VR P + +F I
Sbjct: 120 SMDEAVREHEEFVKERLHSAQRPEAHKLAALHAALRRGGTFMYVPPRVRVPFPVQAFFVI 179
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
E+ Q E T+IIADEGSYV ++EGC P +H E A ++ S++Q+W
Sbjct: 180 TEEQLAQTEHTMIIADEGSYVHFIEGCIVPIPAPFSVHLGGSEFFVERGARLRVSSLQDW 239
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
V +G R + + G P+ L GE + F ++
Sbjct: 240 LGDVVH--------VPVKGAIVKERGTLEELGVSFGGTKIGMRPTIRLVGEGAKLSFNNV 291
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A+ + SG+ + A T++ ++++ + S + G++ V RGA + + C+
Sbjct: 292 ALLKKEMRSWSGSFVKMEAPRTSATVINRSVMLDKSFEEFLGEIDVERGAKGVKGYQSCN 351
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
+LL+ + TIP + SK S L HE T K+ +E LFY G E A+ ++ GF
Sbjct: 352 TLLLSDEATNVTIPKLVSKTSDAELAHEGTVGKLGEEQLFYLRSMGFTEPEAVQMLTIGF 411
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGS 487
+ +++ LP ++ ++++ ++L S
Sbjct: 412 IDPLVKDLPSDYVRAIREIVKMTLNAS 438
>gi|256763089|ref|ZP_05503669.1| FeS assembly protein SufD [Enterococcus faecalis T3]
gi|256684340|gb|EEU24035.1| FeS assembly protein SufD [Enterococcus faecalis T3]
Length = 422
Score = 282 bits (722), Expect = 8e-74, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 175/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 4 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 56
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + Q + S L +
Sbjct: 57 ---------------------YVPSEGNVANFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 95
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 96 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 155
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 156 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 215
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 216 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 267
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 268 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 327
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 328 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 387
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 388 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 420
>gi|257090587|ref|ZP_05584948.1| FeS assembly protein sufD [Enterococcus faecalis CH188]
gi|312905117|ref|ZP_07764238.1| FeS assembly protein SufD [Enterococcus faecalis TX0635]
gi|256999399|gb|EEU85919.1| FeS assembly protein sufD [Enterococcus faecalis CH188]
gi|310631507|gb|EFQ14790.1| FeS assembly protein SufD [Enterococcus faecalis TX0635]
gi|315579054|gb|EFU91245.1| FeS assembly protein SufD [Enterococcus faecalis TX0630]
Length = 428
Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 177/453 (39%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D+A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDDAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|315173658|gb|EFU17675.1| FeS assembly protein SufD [Enterococcus faecalis TX1346]
Length = 428
Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGYILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|196020634|ref|XP_002119103.1| hypothetical protein TRIADDRAFT_63066 [Trichoplax adhaerens]
gi|190576946|gb|EDV18411.1| hypothetical protein TRIADDRAFT_63066 [Trichoplax adhaerens]
Length = 286
Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 167/279 (59%), Positives = 221/279 (79%), Gaps = 5/279 (1%)
Query: 11 VRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKD 70
+ K+ Y+YGF TNI+ D KGLN++ I+ IS+KK EP+++L++RL AY++W MK+
Sbjct: 13 ITKLVNKDYQYGFSTNIEKDIIEKGLNQNTIKLISSKKKEPNFLLKFRLKAYKKWKEMKE 72
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P WA +++P I++ D+ YY+APK + +++VDPELL+T+EKLGI + EQ+ LA
Sbjct: 73 PEWAHLKFPQINYQDIIYYSAPKEQKKLKDINEVDPELLKTFEKLGISLTEQKRLA---- 128
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
VAVD VFDSVS+ TTFKEEL + GVIF ISEAI ++ +L++KYL +VVP+GDN++AA
Sbjct: 129 -NVAVDVVFDSVSIATTFKEELSEYGVIFSSISEAIIDYSELIEKYLGSVVPIGDNYFAA 187
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNSAVFTDGSF YIP+ V+CP++LSTYFRIN++ +GQFERTLIIA+ S V+YLEGCTAP
Sbjct: 188 LNSAVFTDGSFCYIPEDVKCPLDLSTYFRINDEQSGQFERTLIIAEPNSEVNYLEGCTAP 247
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
Q D NQLHAA+VEL+AL+NA IKYSTVQNWY GD G G
Sbjct: 248 QYDTNQLHAAIVELIALENANIKYSTVQNWYSGDEYGNG 286
>gi|327535681|gb|AEA94515.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Enterococcus faecalis OG1RF]
Length = 428
Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + +VE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIIVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKAPHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|306832767|ref|ZP_07465903.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus bovis ATCC 700338]
gi|304425116|gb|EFM28246.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus bovis ATCC 700338]
Length = 430
Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 176/452 (38%), Gaps = 38/452 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S K EP W+ E RL A+ + P R+++ + D
Sbjct: 12 TKESILNFSQTKAEPLWLQERRLTAFDNIDKLTLPEINRVKFHRWNLGD----------- 60
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+D + + LG + + +V+ +L G
Sbjct: 61 -GTISEDQALANVPDFTALGDNPK---------------LVQVGTQTVLEQLPTDLINKG 104
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E PD+++KY ++ AA ++A F + +Y+P + +
Sbjct: 105 VIFTDFYTALEEIPDIIEKYFGAARDFKEDKLAAYHTAYFNSAAVLYVPDNIEIEEPIEG 164
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F ++ F LIIA S ++YLE + Q VE++ALD+++IK+
Sbjct: 165 LFYQDKASDVPFNKHILIIAGRNSRINYLERFETIGEGDAQATANISVEVIALDDSQIKF 224
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++R G + + W L G S
Sbjct: 225 SAIDRLGE-------NVTTYISRR-ARHGKDASVDWALGIMNEGNVIADFDSDLYGNGSH 276
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 277 ANLKVVAASSGRQVQGVDTRVTNYGCNSIGHILQHGVILERGTLTFNGIGHIIKGAKGAD 336
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 337 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKDTAER 396
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF+ V+ ++P+ E E ++D LE
Sbjct: 397 LVIRGFLGAVITEIPVKEVRDEMIAVLDRKLE 428
>gi|296877423|ref|ZP_06901460.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus parasanguinis ATCC
15912]
gi|296431584|gb|EFH17394.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus parasanguinis ATCC
15912]
Length = 420
Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats.
Identities = 86/451 (19%), Positives = 169/451 (37%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + I S EP W+ + R A+ + ++ P+ R+++ + D
Sbjct: 2 SIENITLFSELHAEPSWLQDLRKKAFNKIDQLELPAIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V + L G
Sbjct: 51 ----------------GTITESEASANVPDFTALDSNLKLVQVGTQTVFEQVPQALADQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P +++ Y + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VLFTDFHTALEEIPQVMEDYFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEISEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKY 274
F + F LIIA + S SYLE + + A V E++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKFSYLERLESKGDGSAKATANVTVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGQDASIDWAIGVMNEGNVVADFDSDLVGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNFGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDQHTAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|329115845|ref|ZP_08244562.1| FeS assembly protein SufD [Streptococcus parauberis NCFD 2020]
gi|326906250|gb|EGE53164.1| FeS assembly protein SufD [Streptococcus parauberis NCFD 2020]
Length = 420
Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S K EP+W+ E RL A+ + + PS R+++ + D
Sbjct: 2 TIETIKAFSQSKAEPNWLQELRLAAFDKIEELPLPSIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
E+ + + I + + G QT VV EL + G
Sbjct: 51 ---GTISESTEIAAVPDFMAIGDNPKLVQVGTQT-------------VVEQVPYELVEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
+IF A+ E P++++K+ + V + +A ++A F + +Y+P + +
Sbjct: 95 LIFTDFYSALEEIPEVIEKHFGSAVQFDQDKLSAYHTAYFNSAAVLYVPDFMEIAEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + LIIA + S SYLE + + VE++A +++K+
Sbjct: 155 VFLQDSDSDVPLNKHILIIAGKESKFSYLEQLESIGGQTAKATANITVEVIAQAGSQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I+W+ L GE S
Sbjct: 215 SAIDKLGA-------NVTTYISRRGK-LESNATINWSLSIMNDGNVIADFDSDLLGEGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S G Q T++ + +N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADLKVVAVSAGRQVQGIDTRVTNYGRNSVGHILQHGVILDRGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDKDTAEK 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E K++D L
Sbjct: 387 LVIRGFLGTVITEIPVKEVRDRIIKVLDEKL 417
>gi|315222030|ref|ZP_07863941.1| FeS assembly protein SufD [Streptococcus anginosus F0211]
gi|315188996|gb|EFU22700.1| FeS assembly protein SufD [Streptococcus anginosus F0211]
Length = 420
Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 88/451 (19%), Positives = 171/451 (37%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP+W+ R A+ + +K P R+++ + D
Sbjct: 2 TKETIKHFSQMHAEPEWLANLRQAAFDKIEELKLPIIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L + + + +V+ +L + G
Sbjct: 51 ----------------GTLSESEALANVPDFTALNNHLKLVQIGTQTVLEQLPADLAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P++++K+ + V ++ AA ++A F G+ +YIP V +
Sbjct: 95 VIFTDFYSALEEIPEIIEKHFMSSVKYDEDKLAAYHTAYFNGGAVLYIPDNVEINQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEIKY 274
F + + F LIIA + S +YLE VE++A ++IK+
Sbjct: 155 IFYQDSESDVPFNKHILIIAGKHSKFTYLECLETYGSGTVPVTANITVEVIAQAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG S I W L G S
Sbjct: 215 SAIDRLGE-------NVTAYISRRGK-LDDDSMIDWAIGVMNEGNVIADFDSDLFGRGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S G Q +++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADMKVVALSRGRQIQGIDSRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ K+P+ E E + ID L
Sbjct: 387 LVVRGFLGSVIVKIPVKEVRAEMIENIDEIL 417
>gi|82701831|ref|YP_411397.1| FeS assembly protein SufD [Nitrosospira multiformis ATCC 25196]
gi|82409896|gb|ABB74005.1| Iron-regulated ABC transporter permease protein SufD [Nitrosospira
multiformis ATCC 25196]
Length = 440
Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 101/437 (23%), Positives = 162/437 (37%), Gaps = 33/437 (7%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W + R A +K P+ R F DL R
Sbjct: 28 AWFNQLRANAVDHAGRLKLPT---TRDEEWRFTDLSPLVRHSFQPA------------RA 72
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L E L V VD + +T E L G+I +S AI + +
Sbjct: 73 APALQTADVEHFSLTEAAIRLVFVDGKYMPQL--STPAERLGNRGLIVTNLSSAITANAE 130
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
++ +L N +AALN+A DG+ V +P+G + + R
Sbjct: 131 AIEPHLGQYARFEGNLFAALNTAFLHDGALVIVPRGAVIDTPVHVLLVTTQPEVASHPRC 190
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L IA+ GS V+ LE + + AV E+ DNA+I + VQ
Sbjct: 191 LFIAEAGSEVTILEDYVSLNEAI-YVTNAVTEIAVGDNAQISHIRVQRDSTEAFHIGNCA 249
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ S+ + G+ I+ + L E + +A+ NG Q D+
Sbjct: 250 VSLAH--------ASRYRSVSVALGARISRYDLNTALAAEGAECVIDGLALINGRQLADT 301
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H N TSR + K I+ G ++ + GK+ V GA ++ + +LL+
Sbjct: 302 HSSIDHARPNCTSRQLHKCIADGSAHAVFNGKIMVRPGAQNTDSAQSSRNLLLNAKARID 361
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT ++ E LFY RG+ E AA L+ F E++ ++P+
Sbjct: 362 TKPQLEIFADDVKCAHGATVGQLDSEELFYLKSRGLSEVAARNLLTYAFGAEIIDRIPI- 420
Query: 472 FAVEAQKLIDISLEGSV 488
+ LE +V
Sbjct: 421 ------ASLKYRLERTV 431
>gi|315150165|gb|EFT94181.1| FeS assembly protein SufD [Enterococcus faecalis TX0012]
Length = 428
Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 176/453 (38%), Gaps = 40/453 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A + + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS V + ++ +RG + + W L GE
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM-RDASVDWALGVMNDGDVVADFDSDLVGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +AIS G Q T++ + A ++ I+ G+ T+ G + +GA
Sbjct: 274 AHSEVKVVAISAGKQTQGIDTRVTNKASHSIGHILQHGVIRERGTLTFNGIGHILKGAKG 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + L++ + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 334 ADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEA 393
Query: 453 IALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 394 ERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 426
>gi|218513556|ref|ZP_03510396.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
8C-3]
Length = 265
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 225/265 (84%), Positives = 248/265 (93%)
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A LNSAV TDGSFV++PKGVRCPMELSTYFRINEKGTGQFERTLIIA+EG+YVSYLEGCT
Sbjct: 1 ATLNSAVLTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYVSYLEGCT 60
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
APQRDENQLHAAVVELVALD+AEIKYSTVQNWYPGD +GKGGIYNFVTKRGDCRG RSKI
Sbjct: 61 APQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKI 120
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
SWTQ+ETGSAITWKYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL KNT+SRIVS
Sbjct: 121 SWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVS 180
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
KGI+AG SNNTYRG+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KNS+ EHE
Sbjct: 181 KGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHE 240
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAI 453
ATTSKIS++ LFYCLQRGIP EAAI
Sbjct: 241 ATTSKISEDQLFYCLQRGIPTEAAI 265
>gi|258593118|emb|CBE69429.1| sufD, needed for fhuF Fe-S center production/stability [NC10
bacterium 'Dutch sediment']
Length = 480
Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/492 (19%), Positives = 177/492 (35%), Gaps = 77/492 (15%)
Query: 15 DVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
D+D Y+ FE + D A +G P W + R A+ R++ + P+
Sbjct: 7 DLDSYRADFE-RFERDDAGRG---------------PQWTQQIRTAAFGRFIELGFPT-- 48
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
R + ++ Q+ + E + ++ + + + G +S ++
Sbjct: 49 -TRLEDWKYTNVAPIITTAFRRAGQAQRTLPIEPIESFTLEDVACAQLVFVNGCYSSDLS 107
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA 194
+GV+ ++ + +P VK +L+ + + ALN+A
Sbjct: 108 SLKKL--------------PAGVVVSNLATVLACNPASVKPHLAQHAGFHNQAFVALNTA 153
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKG------------------------------ 224
DG+FV+IPKG + F +
Sbjct: 154 FMEDGAFVFIPKGTVVDAPIHLLFVSSSPCDSALGRPPSTEFGAGFESPVPAGFQGGADD 213
Query: 225 -----TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
+ + R LI+ + S V +E D AV E+V +NA I Y VQ
Sbjct: 214 KSSVASVSYPRNLIVVESHSQVRVIESYVGMGHDVYC-TNAVTEIVGGENAVIDYYKVQR 272
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
V G S ++ G A+ L G+ +
Sbjct: 273 ESEEAFH--------VATAQVQLGRGGTFSSHTIDLGGALVRNNLGVALDGDGAECTLNG 324
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
++++ G Q +D+ T++ H+ + +SR + KGI G S + GKV VH A +
Sbjct: 325 LSMATGRQHVDNHTRIDHIRPHCSSRQLYKGILDGKSRGVFNGKVVVHGAARKTDARQVN 384
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+LL+ + + P +E N+ H T + + +FY RGI A L+
Sbjct: 385 KNLLLSEDAVIDSKPQLEIFNNDVKCTHGTTIGQHDQDAIFYLRSRGIDPAATRRLLTYA 444
Query: 460 FVREVLQKLPME 471
F E+L ++ +E
Sbjct: 445 FASELLSRITIE 456
>gi|313680303|ref|YP_004058042.1| iron-regulated ABC transporter permease protein sufd [Oceanithermus
profundus DSM 14977]
gi|313153018|gb|ADR36869.1| Iron-regulated ABC transporter permease protein SufD [Oceanithermus
profundus DSM 14977]
Length = 441
Score = 279 bits (714), Expect = 6e-73, Method: Composition-based stats.
Identities = 104/457 (22%), Positives = 190/457 (41%), Gaps = 29/457 (6%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ + +R S ++ EP W+ R A+R + + P+ A + DL +
Sbjct: 8 LSLESLRRRSKQRGEPAWLAAARERAWRIFERLDWPTRKN---EAWRYTDLDP-----AW 59
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ + EL + E +P +E LA V D V EL
Sbjct: 60 FALELEEARPAELRQRDE---LPRAVRERLAESDAEAALVFE--DGRLVYAHLPAELGAK 114
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVG-----DNFYAALNSAVFTDGSFVYIPKGVRC 210
GV+ ++ A+ +H + V+ L V ++ AALN+A++ G+FVY+P GV
Sbjct: 115 GVVLSDLAGALEDHGEHVEGALYQAVTETGLQGPEDKLAALNAALWGYGAFVYVPAGVTL 174
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
+ + G RTLI+ D+ + +++E + + H A EL+ A
Sbjct: 175 EAPIGVFHYAARPGKLSLSRTLIVLDDNAEATFIEEYLSEAH--ARTHVATGELLLRPGA 232
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++++ VQ W G + +F +R + + G + + L G
Sbjct: 233 RLRHAGVQTWGAG-------VRHFHRQRALLERDAVLLDLA-VNLGGTLARTEVASELVG 284
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ E + + Q +D T H++ S + KG +A Y+G + + A
Sbjct: 285 PGADSEMLGVYFAGRDQHLDHYTTQHHVSAQARSDVYYKGAAAANGRVVYQGLIQLEPTA 344
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
+ + +LL+ A ++P +E + H ++T+ + +E LFY RGIP
Sbjct: 345 QKTDAYQTNRNLLLSREARAESVPQLEIAANDVRCSHGSSTAPVDEEQLFYLATRGIPRA 404
Query: 451 AAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLEG 486
A L+V F+ EVL ++P+E + ++I+ L G
Sbjct: 405 QAQQLLVAAFLEEVLGRVPLEKLRLHIARIIEERLAG 441
>gi|325283587|ref|YP_004256128.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
gi|324315396|gb|ADY26511.1| FeS assembly protein SufD [Deinococcus proteolyticus MRP]
Length = 450
Score = 279 bits (714), Expect = 6e-73, Method: Composition-based stats.
Identities = 106/465 (22%), Positives = 201/465 (43%), Gaps = 56/465 (12%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
P+W+ R + + +++ P+ W R +DFD L +
Sbjct: 14 PEWLQAKRQESLALFESLEVPTEQVEAWKYTRVE-VDFDSLQPH---------------- 56
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
P+ + +P Q+ L V D V T +EL + GVIF + A
Sbjct: 57 PKRDAVQDSSQLPQSVQKRLNSTDVGAFLVFDGPD-VVYRTELPQELAEKGVIFTDLRTA 115
Query: 166 ICEHPDLVKKYLSTVVP---------------------VGDNFYAALNSAVFTDGSFVYI 204
+ +H D V++YL +VVP + ++AL +A++T+G+FVY+
Sbjct: 116 VEQHADKVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYV 175
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
P+GV + L ++ ++E T RTL++ ++ + +++ + +N VEL
Sbjct: 176 PRGVEVELPLGSFRVMSEANTYTATRTLVVVEDNASAVFIDEQDSEA-LDNAYAIGAVEL 234
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V A ++Y ++QNW G + + +RGD K++ + G ++
Sbjct: 235 VVKPGARLRYVSIQNWGKG-------VTHIQRQRGDV-DKDGKLNSLVVTMGGTLSRTEM 286
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+RG + E ++ ++ Q D T H A N S ++ KG+ A S + G +
Sbjct: 287 QSYVRGSGAESEMLALYFADEDQHFDHYTLQHHAAPNAYSDLLYKGVGADQSVGVFSGMI 346
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
V GA + + + +L++ + ++P +E + H +TT + +E +FY
Sbjct: 347 KVDLGAQKTDAYQKHRTLMLSSEARNFSVPQLEINANDVKCSHGSTTGPVGEEEMFYLRS 406
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
RGI +E A ++V F+ +VL ++P+ I+ + VG
Sbjct: 407 RGISKETAEKMLVTAFLEDVLGRVPL---RSVTDYIEGIIAEKVG 448
>gi|31442391|ref|NP_852648.1| putative ABC transporter [Eimeria tenella strain Penn State]
gi|31322483|gb|AAO40249.1| ORF-G [Eimeria tenella]
Length = 478
Score = 279 bits (714), Expect = 6e-73, Method: Composition-based stats.
Identities = 172/411 (41%), Positives = 252/411 (61%), Gaps = 9/411 (2%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
+R AY K P W P I +DD+ YY+ P +S++++ +L +K+G
Sbjct: 56 FRYKAYLLLKKFKQPDWCFFEIPDIFYDDISYYSIPSKFNSKKSINNMFNSIL---DKIG 112
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ +E ++++ +A+D V DSVS+V T L K+G+IF+P EAI LV Y
Sbjct: 113 LNSQENKLIS-----TLAIDIVLDSVSIVDTITNFLIKTGIIFIPFFEAINYFSYLVFSY 167
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ T+VP+ DNF++ LNS +F+ GSF +I K ++C + LSTYFR + QFERTL+I D
Sbjct: 168 IGTIVPLEDNFFSTLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFERTLLIVD 227
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
SY+ Y EGC+AP E+QLH A+VE++ + + YST+QNWY GD G+GG+YNF T
Sbjct: 228 NSSYIIYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTIQNWYRGDQSGEGGLYNFTT 287
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRG C ++ + W Q+E GSAITWKYPS L G S F+S+++ + Q D+G KML
Sbjct: 288 KRGWCL-KKALLDWVQIEMGSAITWKYPSTYLIGNYSSSNFFSLSLISDMQISDTGNKML 346
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ T S + SK IS S YRG V + + A ++ N+T+C+SLL+GNN TIPY
Sbjct: 347 HIGSYTKSHVYSKSISLNKSIYAYRGLVKIFKNAKYTYNYTECNSLLLGNNTFTITIPYT 406
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
N S + EA+ SK+ + +F+ LQRGI + AI+L++ GF + + K
Sbjct: 407 IVNNFSTFINQEASISKLESDFIFFLLQRGINLKTAISLLIIGFCQNICSK 457
>gi|306829657|ref|ZP_07462847.1| FeS assembly protein SufD [Streptococcus mitis ATCC 6249]
gi|304428743|gb|EFM31833.1| FeS assembly protein SufD [Streptococcus mitis ATCC 6249]
Length = 420
Score = 279 bits (714), Expect = 7e-73, Method: Composition-based stats.
Identities = 88/451 (19%), Positives = 176/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ E R A+ + +++ P R+++ + D
Sbjct: 2 TKETIKLFSEMHAEPSWLSELRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQIPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKFDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LIIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKISYLERLESRGGSSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|323169251|gb|EFZ54927.1| sufB domain protein [Shigella sonnei 53G]
Length = 227
Score = 279 bits (714), Expect = 7e-73, Method: Composition-based stats.
Identities = 151/228 (66%), Positives = 186/228 (81%), Gaps = 1/228 (0%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+E++ NAE+KYSTVQNW+PGD+ GGI NFVTKR C G SK+SWTQ ETGSAITW
Sbjct: 1 MEVIIHKNAEVKYSTVQNWFPGDNN-TGGILNFVTKRALCEGENSKMSWTQSETGSAITW 59
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
KYPSC+LRG+ S GEFYS+A+++G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YR
Sbjct: 60 KYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYR 119
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G V + A ++RNFTQCDS+LIG NCGAHT PY+E +N+S LEHEATTS+I ++ LFY
Sbjct: 120 GLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFY 179
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
CLQRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 180 CLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 227
>gi|270292581|ref|ZP_06198792.1| FeS assembly protein SufD [Streptococcus sp. M143]
gi|270278560|gb|EFA24406.1| FeS assembly protein SufD [Streptococcus sp. M143]
Length = 420
Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats.
Identities = 87/451 (19%), Positives = 176/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKETIKLFSEMHAEPSWLSDLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LIIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQIQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|325982997|ref|YP_004295399.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
gi|325532516|gb|ADZ27237.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
Length = 435
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 88/445 (19%), Positives = 157/445 (35%), Gaps = 37/445 (8%)
Query: 45 SAKKNEP-DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD 103
S K NEP W+ + R A T + P+ R F D+ +
Sbjct: 18 STKSNEPLSWLNQLRARAIDHVSTQRLPT---KRDEEWRFTDISALTRLSFQSAQPHTNL 74
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
++ E L ++S V VD + L +S
Sbjct: 75 QTQDI------------EHLYLKEAKSSLVFVDGYYSPQLSTHVDSAVL-----QIGNLS 117
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
+ P +++ + +N +AALN+A D + + PK + F +
Sbjct: 118 TFLLTQPSVLESHFGQYAKFDNNVFAALNTAFLRDCALIIAPKNTVIAEPIHLLFIATQS 177
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
+ R LII + GS V+++E R+ + +V E+ NA K+ +Q
Sbjct: 178 EVTCYPRCLIIGEPGSDVTFVEDY-VSLRETAYVTNSVTEISLSANAHAKHIRIQRESAQ 236
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
+ S + G+ I+ + L E + +A+
Sbjct: 237 AYHLANCAVSLAH--------GSNYQSVSISLGAQISRYNLNVQLGDEAAQCTIDGLALI 288
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+ Q D+ T + H+ N SR K I ++ + GK+ V A + + +LL
Sbjct: 289 SDNQLADTHTCIDHIKPNGISRQQHKCIVNDKAHAVFNGKIIVRPHAQQTNSSQSSRNLL 348
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ T P +E H AT ++ E +FY RG+ E A +L+ F E
Sbjct: 349 LSKTAQIDTKPQLEIFADDVKCAHGATVGQLDQEEIFYLQSRGLSEATARSLLTYAFGAE 408
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSV 488
++ ++P+ + LE +V
Sbjct: 409 IIDRIPV-------NSLRQQLEQTV 426
>gi|253752536|ref|YP_003025677.1| hypothetical protein SSUSC84_1694 [Streptococcus suis SC84]
gi|253754362|ref|YP_003027503.1| hypothetical protein SSU1670 [Streptococcus suis P1/7]
gi|253756296|ref|YP_003029436.1| hypothetical protein SSUBM407_1742 [Streptococcus suis BM407]
gi|251816825|emb|CAZ52470.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818760|emb|CAZ56598.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251820608|emb|CAR47366.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|319758947|gb|ADV70889.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis JS14]
Length = 420
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ SA + EP W+ + RL A+ + + P R+++ + D
Sbjct: 2 TKEKIQEFSALQAEPTWLTDLRLKAFDKIAELDLPVIERVKFHRWNLGDGS--------- 52
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L T +++G + + S +++ L + G
Sbjct: 53 ------------LATNDEIG------AVPDFTAIGDNPMLVQVGSQTILEQLPVALVEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F + A+ PD+++KYL V ++ AA N+A F + +Y+P V +
Sbjct: 95 VVFTDFASAMDVIPDVLEKYLGAAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEA 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F R LIIA + + ++YLE + VVE++AL ++IK+
Sbjct: 155 LFYQDSTSPVAFNKRVLIIAGKNAKLNYLERFESLGDGAATTSANIVVEVIALAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++ +RG G + I W L+G S
Sbjct: 215 AAIDRLGK-------HLDTYLNRRG-YLGNDATIDWAIGLLNEGNVVADLDSELKGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +S+G Q T++ + N+ I+ G+ T+ G + RGA +
Sbjct: 267 ANLKVVGLSSGRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E + +I+ L
Sbjct: 387 LVVRGFLGSVITEIPVKEVRDQLIAVIEEKL 417
>gi|331266207|ref|YP_004325837.1| FeS assembly protein SufD [Streptococcus oralis Uo5]
gi|326682879|emb|CBZ00496.1| FeS assembly protein SufD [Streptococcus oralis Uo5]
Length = 420
Score = 278 bits (711), Expect = 2e-72, Method: Composition-based stats.
Identities = 88/451 (19%), Positives = 176/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VIFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LIIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKISYLERLESRGGGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLLGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|315613320|ref|ZP_07888229.1| FeS assembly protein SufD [Streptococcus sanguinis ATCC 49296]
gi|315314555|gb|EFU62598.1| FeS assembly protein SufD [Streptococcus sanguinis ATCC 49296]
Length = 420
Score = 278 bits (711), Expect = 2e-72, Method: Composition-based stats.
Identities = 87/451 (19%), Positives = 177/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LIIA + S +SYLE + ++ VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKISYLERLESRGGGSAKVTANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|146319529|ref|YP_001199241.1| ABC transporter permease [Streptococcus suis 05ZYH33]
gi|146321726|ref|YP_001201437.1| ABC transporter permease [Streptococcus suis 98HAH33]
gi|145690335|gb|ABP90841.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05ZYH33]
gi|145692532|gb|ABP93037.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 98HAH33]
gi|292559145|gb|ADE32146.1| FeS assembly protein SufD [Streptococcus suis GZ1]
Length = 443
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ SA + EP W+ + RL A+ + + P R+++ + D
Sbjct: 25 TKEKIQEFSALQAEPTWLTDLRLKAFDKIAELDLPVIERVKFHRWNLGDGS--------- 75
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L T +++G + + S +++ L + G
Sbjct: 76 ------------LATNDEIG------AVPDFTAIGDNPMLVQVGSQTILEQLPVALVEKG 117
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F + A+ PD+++KYL V ++ AA N+A F + +Y+P V +
Sbjct: 118 VVFTDFASAMDVIPDVLEKYLGAAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEA 177
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F R LIIA + + ++YLE + VVE++AL ++IK+
Sbjct: 178 LFYQDSTSPVAFNKRVLIIAGKNAKLNYLERFESLGDGAATTSANIVVEVIALAGSQIKF 237
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++ +RG G + I W L+G S
Sbjct: 238 AAIDRLGK-------HLDTYLNRRG-YLGNDATIDWAIGLLNEGNVVADLDSELKGNGSH 289
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +S+G Q T++ + N+ I+ G+ T+ G + RGA +
Sbjct: 290 ANLKVVGLSSGRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGAD 349
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ A
Sbjct: 350 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAER 409
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E + +I+ L
Sbjct: 410 LVVRGFLGSVITEIPVKEVRDQLIAVIEEKL 440
>gi|289167759|ref|YP_003446028.1| hypothetical protein smi_0916 [Streptococcus mitis B6]
gi|288907326|emb|CBJ22163.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 420
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 87/451 (19%), Positives = 176/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIDTLELPDIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQIPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHIMIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|124027892|ref|YP_001013212.1| ABC transporter [Hyperthermus butylicus DSM 5456]
gi|123978586|gb|ABM80867.1| predicted ABC transporter [Hyperthermus butylicus DSM 5456]
Length = 439
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 130/452 (28%), Positives = 222/452 (49%), Gaps = 25/452 (5%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAID-FDDLYYYAAPKS 94
L+ + I S K+ EP+W+L RL AY + P+ID + + Y +
Sbjct: 11 LSREDIIEFSRKRGEPEWVLRLRLKAYEYIRSTSY-------DPSIDPYMEKVTYR--QF 61
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ G + VD +L + +LGI E EI+ D+V + T K L+K
Sbjct: 62 LEGLEKPLIVDEQLAKAARRLGIRPDELEII------YSGFSVNIDNVVIKTVLK-MLEK 114
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI + EA+ +P +VK Y + + A + ++ G FVY+P+GVR P +
Sbjct: 115 RGVILTSMDEAVKRYP-VVKDYAFRGLHPTLSKKVAYHVMLWAGGIFVYVPEGVRLPQPI 173
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
F I ++G Q E TLI+ +EG+ + ++EGCTAP R +H +E D A +
Sbjct: 174 QGLFIIGKEGLSQTEHTLIVLEEGAELHWIEGCTAPLRLSYGVHLGGLEAFVKDRARLFV 233
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
++ NW G +++ KR G ++ T + + P LRG+ S
Sbjct: 234 VSINNWP-------GDVHHTPAKRVIVEGYKAYAELTSVSLAAKTVNVAPRIDLRGQDST 286
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+I + G Q + S +++ A T +++++ + ++ +RG++ V RGA +
Sbjct: 287 AVIQNIGLYRGNQVVRSSPLIVYEAPGTRGQLLNRTVVKDSADEEFRGRLEVRRGAKGAT 346
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
F C++L+IG+ + IP I S+ L HEA+ +IS E L+Y G EE A
Sbjct: 347 GFMSCNTLIIGDKARSAAIPAIASEERDSELSHEASVGRISYEKLYYLQLMGFDEEEATW 406
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
LIV+GF V++KLP + +E +K+++++++G
Sbjct: 407 LIVSGFFDPVIKKLPFDIQIEVRKILELAVKG 438
>gi|223933672|ref|ZP_03625649.1| FeS assembly protein SufD [Streptococcus suis 89/1591]
gi|302024472|ref|ZP_07249683.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus suis 05HAS68]
gi|330833498|ref|YP_004402323.1| FeS assembly protein SufD [Streptococcus suis ST3]
gi|223897665|gb|EEF64049.1| FeS assembly protein SufD [Streptococcus suis 89/1591]
gi|329307721|gb|AEB82137.1| FeS assembly protein SufD [Streptococcus suis ST3]
Length = 420
Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ SA + EP W+ + RL A+ + + P R+++ + D
Sbjct: 2 TKEKIQEFSALQAEPTWLTDLRLKAFDKIAELDLPVIERVKFHRWNLGDGS--------- 52
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L T +++G + + S +++ +L + G
Sbjct: 53 ------------LATNDEIG------AVPDFTAIGDNPMLVQVGSQTILEQLPVDLVEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F + A+ PD+++KYL V ++ AA N+A F + +Y+P V +
Sbjct: 95 VVFTDFASAMDLIPDVIEKYLGVAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEA 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F R LIIA + + ++YLE + VVE++AL ++IK+
Sbjct: 155 LFYQDSTSPVAFNKRVLIIAGKNAKLNYLERFESLGDGAATTSANIVVEVIALAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++ +RG G + I W L+G S
Sbjct: 215 AAIDRLGK-------HLDTYLNRRG-YLGNDATIDWAIGLLNEGNVVADLDSELKGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +S+G Q T++ + N+ I+ G+ T+ G + RGA +
Sbjct: 267 ANLKVVGLSSGRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E + +I+ L
Sbjct: 387 LVVRGFLGAVITEIPVKEVRDQLIAVIEEKL 417
>gi|315283505|ref|ZP_07871681.1| FeS assembly protein SufB [Listeria marthii FSL S4-120]
gi|313612859|gb|EFR86825.1| FeS assembly protein SufB [Listeria marthii FSL S4-120]
Length = 248
Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats.
Identities = 117/256 (45%), Positives = 158/256 (61%), Gaps = 8/256 (3%)
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I DE + V+Y+EGCTAP N LH+AVVE++ A +Y+T+QNW +YN
Sbjct: 1 IVDENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRYTTIQNWA-------NNVYN 53
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
VTKR C + + W GS +T KYP+ LRGE + G SIAI+ Q+ D+G
Sbjct: 54 LVTKRTFC-EENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGA 112
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
KM+H A NT+S IVSK IS N TYRG V R A +R+ +CD+L++ N + TI
Sbjct: 113 KMMHYAPNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTI 172
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PY E NS+ +LEHEA SK+S+E LFY + RG+ EE A +IV GF+ ++LPME+A
Sbjct: 173 PYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYA 232
Query: 474 VEAQKLIDISLEGSVG 489
VE +LI +EGS+G
Sbjct: 233 VEMNRLIKFEMEGSIG 248
>gi|163789749|ref|ZP_02184186.1| hypothetical protein CAT7_05941 [Carnobacterium sp. AT7]
gi|159874971|gb|EDP69038.1| hypothetical protein CAT7_05941 [Carnobacterium sp. AT7]
Length = 428
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 96/434 (22%), Positives = 175/434 (40%), Gaps = 35/434 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D ++ S + EP WMLE R A + ++ P + R++Y
Sbjct: 11 DAVQQFSVMQEEPLWMLELRKTALAKIDGLELPVFERVKYQRWPL--------------- 55
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
E+ + + ++ L G + + + +V+ + + GVI
Sbjct: 56 -------FEVPDLFSYEEGILLAEDFLTGDNDAPRVIQVG--NQTVMEQLPMKYYEQGVI 106
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ EHPD+V++ T V ++ A ++A T G F+Y+PK V L
Sbjct: 107 FTDIFTALQEHPDVVEQVYMTLAVAHDEDKLTAFHTAFMTSGLFLYVPKNVVIEEPLEAL 166
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ N + + LI AD S +Y+E ++N +VE++A A++KYS
Sbjct: 167 YVQNSQVQNSWIKHVLIFADTNSEFTYVEKYETIGTEKN-TANIIVEVIANPGAKVKYSA 225
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V ++ +RG + I W + L GE +
Sbjct: 226 VDQLGE-------NTTTYINRRGHIL-KDATIEWAMGVMNTGNVVADFDTDLIGEGAHSA 277
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+AIS G Q T++ + +NT I+ G+ S T+ G + +GA +
Sbjct: 278 VKIVAISMGKQIQGIDTRVTNYGRNTIGHILQHGVILDKSTLTFNGIGHIIKGAKGADAQ 337
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ + P + + H A+ ++ E L+Y + RGIP++ A L+
Sbjct: 338 QESRVLMLSEHARGDANPILLIDENDVTAGHAASVGRVDPEELYYLMSRGIPKQEAERLV 397
Query: 457 VNGFVREVLQKLPM 470
+ GF+ V+ +P+
Sbjct: 398 IRGFLGSVIAAIPL 411
>gi|168484750|ref|ZP_02709695.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1873-00]
gi|168490303|ref|ZP_02714502.1| FeS assembly protein SufD [Streptococcus pneumoniae SP195]
gi|303255295|ref|ZP_07341366.1| FeS assembly protein SufD [Streptococcus pneumoniae BS455]
gi|303260387|ref|ZP_07346356.1| FeS assembly protein SufD [Streptococcus pneumoniae SP-BS293]
gi|303262744|ref|ZP_07348682.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS292]
gi|303265033|ref|ZP_07350947.1| FeS assembly protein SufD [Streptococcus pneumoniae BS397]
gi|303267137|ref|ZP_07353006.1| FeS assembly protein SufD [Streptococcus pneumoniae BS457]
gi|303269367|ref|ZP_07355138.1| FeS assembly protein SufD [Streptococcus pneumoniae BS458]
gi|172042070|gb|EDT50116.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1873-00]
gi|183571344|gb|EDT91872.1| FeS assembly protein SufD [Streptococcus pneumoniae SP195]
gi|301801692|emb|CBW34398.1| FeS assembly protein SufD [Streptococcus pneumoniae INV200]
gi|302597764|gb|EFL64839.1| FeS assembly protein SufD [Streptococcus pneumoniae BS455]
gi|302636066|gb|EFL66563.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS292]
gi|302638422|gb|EFL68888.1| FeS assembly protein SufD [Streptococcus pneumoniae SP-BS293]
gi|302641085|gb|EFL71461.1| FeS assembly protein SufD [Streptococcus pneumoniae BS458]
gi|302643345|gb|EFL73623.1| FeS assembly protein SufD [Streptococcus pneumoniae BS457]
gi|302645393|gb|EFL75626.1| FeS assembly protein SufD [Streptococcus pneumoniae BS397]
gi|332073199|gb|EGI83678.1| feS assembly protein SufD [Streptococcus pneumoniae GA17570]
gi|332204024|gb|EGJ18091.1| feS assembly protein SufD [Streptococcus pneumoniae GA47368]
Length = 420
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + ++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLLGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|307708556|ref|ZP_07645021.1| FeS assembly protein SufD [Streptococcus mitis NCTC 12261]
gi|307615472|gb|EFN94680.1| FeS assembly protein SufD [Streptococcus mitis NCTC 12261]
Length = 420
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 86/451 (19%), Positives = 175/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
E + + + +V EL + G
Sbjct: 51 ----------------ETITESEPSANVPDFTALDNHLKLVQVGTQTVFEQIPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHIMIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|94984579|ref|YP_603943.1| FeS assembly protein SufD [Deinococcus geothermalis DSM 11300]
gi|94554860|gb|ABF44774.1| Iron-regulated ABC transporter permease protein SufD [Deinococcus
geothermalis DSM 11300]
Length = 450
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 112/465 (24%), Positives = 208/465 (44%), Gaps = 56/465 (12%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
P+W+ R + + + PS W R +DF +L +
Sbjct: 14 PEWLTAKRRASLDLFHQLDVPSESVEAWKYTRV-DVDFSELRPH---------------- 56
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
P+ R + +P Q+ L V D V T EL++ GVIF + A
Sbjct: 57 PKRERVTDLSALPSSVQKRLTSTDVGAYLVLDGPD-VVYATELPAELREKGVIFTDLKTA 115
Query: 166 ICEHPDLVKKYLSTVVP---------------------VGDNFYAALNSAVFTDGSFVYI 204
+ +H +LV++YL +VVP + ++AL +A++T+G+FVY+
Sbjct: 116 VEQHAELVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYV 175
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
P+GV + L ++ ++E GT RTL++A+E + V++++ + VEL
Sbjct: 176 PRGVEVELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDE-QDSEDLPGTYAIGAVEL 234
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V A ++Y ++QNW G + + +RGD + ++ + G ++
Sbjct: 235 VVKQGARLRYVSIQNWGKG-------VTHIQRQRGDVH-RDATLNSLVVTMGGTLSRTEM 286
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
LRG+ S E + ++ Q D T H A + S ++ KG++A S + G +
Sbjct: 287 QSYLRGQGSDSEMLGLYFASKDQHFDHYTLQHHAAPHAHSDLLYKGVNADQSVGVFSGMI 346
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
V GA + + + +L++ + +++P +E + H +TT ++ E LF+
Sbjct: 347 KVDLGAQKTDAYQKHRTLMLSSEAQNYSVPQLEINANDVRCSHGSTTGPVNQEALFFLRS 406
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
RGI +E A ++V F+ +VL ++P++ V K I+ + VG
Sbjct: 407 RGIHKELAEKMLVTAFLEDVLARVPLQSVV---KYIEGIIAEKVG 448
>gi|182683783|ref|YP_001835530.1| hypothetical protein SPCG_0813 [Streptococcus pneumoniae CGSP14]
gi|182629117|gb|ACB90065.1| hypothetical protein SPCG_0813 [Streptococcus pneumoniae CGSP14]
Length = 420
Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + ++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKATDNITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLLGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|312865621|ref|ZP_07725846.1| FeS assembly protein SufD [Streptococcus downei F0415]
gi|311098889|gb|EFQ57108.1| FeS assembly protein SufD [Streptococcus downei F0415]
Length = 420
Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats.
Identities = 81/451 (17%), Positives = 170/451 (37%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S K EP W+ E RL A+ + ++ P ++R+ + D
Sbjct: 2 TKEAIINFSQLKAEPAWLQERRLAAFEQIDHLELPRIEKVRFNRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L + S+ + +++ +L + G
Sbjct: 51 ----------------GSLAENEPSANVPDFTALSQNPKLVQVGTQTLLEQLSPDLLEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F + A+ P++++ +P ++ AA + A F + +Y+P + L
Sbjct: 95 VVFSDFASALETIPEVLEANFGKALPFDEDKLAAYHYAYFNSSAVLYVPDNLEMDQPLEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LIIA S SYLE + + VE++A +++K+
Sbjct: 155 LFYQDSDSDVPFNKHILIIAGRNSKFSYLERFESIGSGSAKATANISVEVIAGAGSQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLG-------QNLTTYMSRRG-RLERDASIDWALGVMNEGNVIGDFDSDLIGDGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A S+G Q T++ + +N+ I+ G+ T+ G + +GA +
Sbjct: 267 ADLKVVAASSGRQVQGIDTRVTNYGRNSVGHILQHGVILEKGTLTFNGIGHIVKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ +I + ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQIDPDDMYYLMSRGLKHDEAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P + E ++D L
Sbjct: 387 LVILGFLGAVITEIPSKDVRDEMIAVLDSKL 417
>gi|148984601|ref|ZP_01817869.1| FeS assembly protein SufD [Streptococcus pneumoniae SP3-BS71]
gi|148988287|ref|ZP_01819734.1| FeS assembly protein SufD [Streptococcus pneumoniae SP6-BS73]
gi|149010500|ref|ZP_01831871.1| FeS assembly protein SufD [Streptococcus pneumoniae SP19-BS75]
gi|149026349|ref|ZP_01836504.1| FeS assembly protein SufD [Streptococcus pneumoniae SP23-BS72]
gi|168485815|ref|ZP_02710323.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1087-00]
gi|169832415|ref|YP_001694320.1| FeS assembly protein SufD [Streptococcus pneumoniae Hungary19A-6]
gi|194398657|ref|YP_002037504.1| FeS assembly protein SufD [Streptococcus pneumoniae G54]
gi|225858668|ref|YP_002740178.1| FeS assembly protein SufD [Streptococcus pneumoniae 70585]
gi|147764981|gb|EDK71910.1| FeS assembly protein SufD [Streptococcus pneumoniae SP19-BS75]
gi|147922992|gb|EDK74107.1| FeS assembly protein SufD [Streptococcus pneumoniae SP3-BS71]
gi|147925968|gb|EDK77042.1| FeS assembly protein SufD [Streptococcus pneumoniae SP6-BS73]
gi|147929311|gb|EDK80310.1| FeS assembly protein SufD [Streptococcus pneumoniae SP23-BS72]
gi|168994917|gb|ACA35529.1| FeS assembly protein SufD [Streptococcus pneumoniae Hungary19A-6]
gi|183571018|gb|EDT91546.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC1087-00]
gi|194358324|gb|ACF56772.1| FeS assembly protein SufD [Streptococcus pneumoniae G54]
gi|225720959|gb|ACO16813.1| FeS assembly protein SufD [Streptococcus pneumoniae 70585]
gi|301799860|emb|CBW32435.1| FeS assembly protein SufD [Streptococcus pneumoniae OXC141]
gi|327390221|gb|EGE88564.1| feS assembly protein SufD [Streptococcus pneumoniae GA04375]
gi|332077281|gb|EGI87743.1| feS assembly protein SufD [Streptococcus pneumoniae GA17545]
Length = 420
Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 180/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + +++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKVTANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|307127581|ref|YP_003879612.1| FeS assembly protein SufD [Streptococcus pneumoniae 670-6B]
gi|306484643|gb|ADM91512.1| FeS assembly protein SufD [Streptococcus pneumoniae 670-6B]
Length = 420
Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 181/451 (40%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P+ R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPAIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + +++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKVTANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|15902816|ref|NP_358366.1| hypothetical protein spr0772 [Streptococcus pneumoniae R6]
gi|116516109|ref|YP_816250.1| hypothetical protein SPD_0763 [Streptococcus pneumoniae D39]
gi|148993682|ref|ZP_01823129.1| FeS assembly protein SufD [Streptococcus pneumoniae SP9-BS68]
gi|168490957|ref|ZP_02715100.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC0288-04]
gi|221231647|ref|YP_002510799.1| FeS assembly protein SufD [Streptococcus pneumoniae ATCC 700669]
gi|225854376|ref|YP_002735888.1| FeS assembly protein SufD [Streptococcus pneumoniae JJA]
gi|225861239|ref|YP_002742748.1| FeS assembly protein SufD [Streptococcus pneumoniae Taiwan19F-14]
gi|298229162|ref|ZP_06962843.1| FeS assembly protein SufD [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255730|ref|ZP_06979316.1| FeS assembly protein SufD [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503126|ref|YP_003725066.1| iron-sulfur ABC superfamily transporter membrane protein
[Streptococcus pneumoniae TCH8431/19A]
gi|15458368|gb|AAK99576.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076685|gb|ABJ54405.1| FeS assembly protein SufD [Streptococcus pneumoniae D39]
gi|147927762|gb|EDK78785.1| FeS assembly protein SufD [Streptococcus pneumoniae SP9-BS68]
gi|183574544|gb|EDT95072.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC0288-04]
gi|220674107|emb|CAR68626.1| FeS assembly protein SufD [Streptococcus pneumoniae ATCC 700669]
gi|225724194|gb|ACO20047.1| FeS assembly protein SufD [Streptococcus pneumoniae JJA]
gi|225727129|gb|ACO22980.1| FeS assembly protein SufD [Streptococcus pneumoniae Taiwan19F-14]
gi|298238721|gb|ADI69852.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus pneumoniae TCH8431/19A]
gi|332202724|gb|EGJ16793.1| feS assembly protein SufD [Streptococcus pneumoniae GA41317]
Length = 420
Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + ++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|225856534|ref|YP_002738045.1| FeS assembly protein SufD [Streptococcus pneumoniae P1031]
gi|225724696|gb|ACO20548.1| FeS assembly protein SufD [Streptococcus pneumoniae P1031]
Length = 420
Score = 276 bits (707), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + ++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKATANITVEVIAHSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSY 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|307706416|ref|ZP_07643226.1| feS assembly protein SufD [Streptococcus mitis SK321]
gi|307618203|gb|EFN97360.1| feS assembly protein SufD [Streptococcus mitis SK321]
Length = 420
Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats.
Identities = 86/451 (19%), Positives = 174/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V EL + G
Sbjct: 51 ----------------GTITENEPSANVPDFTALDNHLKLVQVGTQTVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHIMIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|306825068|ref|ZP_07458410.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432504|gb|EFM35478.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 420
Score = 276 bits (706), Expect = 6e-72, Method: Composition-based stats.
Identities = 85/451 (18%), Positives = 174/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKETIKLFSETHAEPSWLSDLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V EL + G
Sbjct: 51 ----------------GTIIESETSANVPDFTALDNHLKLIQVGTQTVFEQIPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V ++ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDEDKLAAYHTAYFNSGAVLYIPDNVEIKEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F LIIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHILIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQIQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|15900751|ref|NP_345355.1| hypothetical protein SP_0868 [Streptococcus pneumoniae TIGR4]
gi|14972340|gb|AAK74995.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
Length = 420
Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats.
Identities = 88/451 (19%), Positives = 177/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P +++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIECVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +II + S +SYLE + ++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIVGKNSKISYLERLESRGEGSDKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|149002403|ref|ZP_01827337.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS69]
gi|149007187|ref|ZP_01830851.1| FeS assembly protein SufD [Streptococcus pneumoniae SP18-BS74]
gi|168493022|ref|ZP_02717165.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC3059-06]
gi|168575526|ref|ZP_02721462.1| FeS assembly protein SufD [Streptococcus pneumoniae MLV-016]
gi|237650842|ref|ZP_04525094.1| FeS assembly protein SufD [Streptococcus pneumoniae CCRI 1974]
gi|237822662|ref|ZP_04598507.1| FeS assembly protein SufD [Streptococcus pneumoniae CCRI 1974M2]
gi|147759340|gb|EDK66332.1| FeS assembly protein SufD [Streptococcus pneumoniae SP14-BS69]
gi|147761225|gb|EDK68192.1| FeS assembly protein SufD [Streptococcus pneumoniae SP18-BS74]
gi|183577060|gb|EDT97588.1| FeS assembly protein SufD [Streptococcus pneumoniae CDC3059-06]
gi|183578630|gb|EDT99158.1| FeS assembly protein SufD [Streptococcus pneumoniae MLV-016]
gi|332076148|gb|EGI86614.1| feS assembly protein SufD [Streptococcus pneumoniae GA41301]
Length = 420
Score = 276 bits (705), Expect = 8e-72, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 178/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S ++YLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKINYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|148997053|ref|ZP_01824707.1| FeS assembly protein SufD [Streptococcus pneumoniae SP11-BS70]
gi|307067466|ref|YP_003876432.1| Fe-S cluster assemble ABC transporter permease [Streptococcus
pneumoniae AP200]
gi|147756753|gb|EDK63793.1| FeS assembly protein SufD [Streptococcus pneumoniae SP11-BS70]
gi|306409003|gb|ADM84430.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Streptococcus pneumoniae AP200]
Length = 420
Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + +++ VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKVTANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + + A +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKDAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|219847880|ref|YP_002462313.1| FeS assembly protein SufD [Chloroflexus aggregans DSM 9485]
gi|219542139|gb|ACL23877.1| FeS assembly protein SufD [Chloroflexus aggregans DSM 9485]
Length = 404
Score = 275 bits (704), Expect = 9e-72, Method: Composition-based stats.
Identities = 93/451 (20%), Positives = 170/451 (37%), Gaps = 59/451 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++ + + S EP W+ + R A+ + M P W R +D + S
Sbjct: 11 ISAEFVVARSQAAGEPAWLTDRRREAWAAFAQMNPPEWRRTDLSKLDPTTIAP-----SD 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ DP L
Sbjct: 66 SAHATAIQWDPA--------------------------------------------LAAQ 81
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV+F ++ A+ H L++KY+ T V + ++AL +A++ DG+F+Y+PKGV + L
Sbjct: 82 GVVFTTLAAALRSHEALIQKYMDTAVEPLKHKFSALRAALWQDGAFLYVPKGVAIEVPLR 141
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + G F RTL+I + + V+ +E T+P + E+ D A +++
Sbjct: 142 LIYTLGTDGVAIFPRTLVIVEPQASVTLIEEFTSPDLRAGSFAGPITEIFVGDGASVRFI 201
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++Q+W G +Y+ +R + + WT ++ G + L G S
Sbjct: 202 SIQHWGRG-------VYHLAGQRAI-LNRDANLEWTSIQLGGQVQHIEAEATLVGNGSRL 253
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q + M H+ N S + K + + + + G + + +A +
Sbjct: 254 NWLGATFAADSQNLVIAPWMRHVGHNCESFMQFKTVVNDTAYSVFDGMIKIEHESAATST 313
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L + +IP + + H +T+ I E LFY RGIP A
Sbjct: 314 RLEEHALHLSPKARNDSIPGLMISTNDVLKGGHASTSGDIDQEQLFYMQTRGIPRAEAQR 373
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
+IV GF L +P+ E E I +
Sbjct: 374 MIVMGFFEPALDTIPLEELRAELIAEIAAKI 404
>gi|81428721|ref|YP_395721.1| iron/sulfur ABC transporter [Lactobacillus sakei subsp. sakei 23K]
gi|78610363|emb|CAI55413.1| Putative ABC-type system involved in Fe-S cluster assembly (SufB
homolog) [Lactobacillus sakei subsp. sakei 23K]
Length = 434
Score = 275 bits (704), Expect = 9e-72, Method: Composition-based stats.
Identities = 95/452 (21%), Positives = 178/452 (39%), Gaps = 35/452 (7%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
+ + + S EPDW R A + + P + +I Y A +
Sbjct: 7 ITPEQVAAFSIAHQEPDWFAALRQTALGQIEKLDLPIFEKINYKHW------PIMAASAP 60
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
S+ D PE++ T+ EL +
Sbjct: 61 TLTTSVTDTLPEMVADL-----------------TADQPYVIQVGQKIAKLNLPSELAEQ 103
Query: 156 GVIFMPISEAICEHPDLVKKYLSTV-VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ ++P+LV +Y V V ++ A ++A+ G F+Y+PK V +
Sbjct: 104 GVIFTDIFTALQDYPELVHEYYMQVTVKPDEDRLTAFHTALMNSGMFLYVPKNVVIKQPI 163
Query: 215 STYFRINEKGTGQFERT-LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ Y+ + F LI+A++ S SYLE +N L VVE++A DN+ +
Sbjct: 164 TAYYVQDSTQATDFIHHVLIVAEQNSEFSYLENLQTMGDHKN-LANMVVEVIAKDNSHVH 222
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+S V + + ++ +RG ++I W L G+ S
Sbjct: 223 FSAVDAFGK-------SVTTYLNRRGHLM-RDARIDWALGFMNDGNIIGDFDSDLVGDGS 274
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E +AIS G Q T++ ++ + I+ G+ + T+ G + +GA +
Sbjct: 275 HAETKVVAISTGKQIQGIDTRVTNIGPRSIGHILQHGVILEDATLTFNGIGHIIKGAKGA 334
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ P + + H A+ +++++ ++Y + RG+ +E A
Sbjct: 335 DAQQENRVLMLSRTARGDANPLLLIDENDVQAGHAASVGRVNEQQMYYLMSRGLSKEVAQ 394
Query: 454 ALIVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
L++ GF+ VL ++P + + I+ L
Sbjct: 395 RLVIRGFLGAVLTEIPDKNVRQQLTDTIERKL 426
>gi|320334855|ref|YP_004171566.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
gi|319756144|gb|ADV67901.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
Length = 451
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 107/461 (23%), Positives = 202/461 (43%), Gaps = 48/461 (10%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL-YYYAAPKSIVGPQSLDDVDPELL 109
P+W+ R + + + + P+ A + + + A + + V+
Sbjct: 15 PEWLAAKRQESLKLFNDLNTPT---ENVEAWKYTQVDVDFGALRPHGKRDRVSGVEA--- 68
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
+P R Q+ L V D V T ++ GVIF + A+ +H
Sbjct: 69 -------LPERVQKRLRSTDVGGYLVFDGPD-VVYSTDLPADVAAKGVIFTDLKTAVEQH 120
Query: 170 PDLVKKYLSTVVP---------------------VGDNFYAALNSAVFTDGSFVYIPKGV 208
D V++YL +VVP + ++ALN+A++T+G+FVY+P+GV
Sbjct: 121 ADKVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALNAALWTNGAFVYVPRGV 180
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
+ L ++ ++E GT RTL++A+E + V++++ VELV
Sbjct: 181 EVELPLGSFRVMSEAGTYTATRTLVVAEENAQVTFIDE-QDSDELPGTYAFGAVELVVKA 239
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
A ++Y +VQNW G + + +RGD + ++ + G ++ L
Sbjct: 240 GARVRYVSVQNWGKG-------VTHIQRQRGDV-DRDATLNSLVVTMGGTLSRTEMQSYL 291
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
RG+ S E ++ +N Q D T H A + S ++ KG+ + + G + V
Sbjct: 292 RGQGSDSEMLALYFANEDQHFDHYTLQHHAAPHAHSDLLYKGVGDNQAVGVFSGMIKVDL 351
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
GA + + + +L++ + ++P +E + H +TT ++ E LF+ RGI
Sbjct: 352 GAQKTDAYQKHRTLMLSSEARNFSVPQLEINANDVRCSHGSTTGPVNAEQLFFLRSRGIS 411
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+E A ++V F+ +VL ++P++ V K I+ + VG
Sbjct: 412 KEQAEKMLVTAFLEDVLSRVPLKSVV---KYIEGIIAEKVG 449
>gi|94993636|ref|YP_601734.1| SufD protein [Streptococcus pyogenes MGAS10750]
gi|94547144|gb|ABF37190.1| SufD protein [Streptococcus pyogenes MGAS10750]
Length = 420
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 83/450 (18%), Positives = 170/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPNLELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I WT L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWTLAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|315639988|ref|ZP_07895115.1| FeS assembly protein SufD [Enterococcus italicus DSM 15952]
gi|315484250|gb|EFU74719.1| FeS assembly protein SufD [Enterococcus italicus DSM 15952]
Length = 428
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/450 (20%), Positives = 172/450 (38%), Gaps = 35/450 (7%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D + SA K EP +M R A + P R+R+ ++
Sbjct: 10 DAVNVFSATKEEPSFMSALRQQAIAEIDALPLPHIERVRFDRWPLFEIT----------- 58
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
G + + A + D ++V + L GVI
Sbjct: 59 ------------EAGLSGEVAVDASVPAFDEMKNNPTIVQQDDLTVFEQLPQALADQGVI 106
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+ A+ ++P+LV+ Y VP+ ++ A ++A G F+Y+PK V +
Sbjct: 107 LTDLFSAMQDYPELVESYYMKKAVPINEDKMTAAHAAFMNSGIFLYVPKNVVIKEPIEAL 166
Query: 218 FRINEKGTGQF-ERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F N F + LI+A+E S YLE + +VE++A + A++K+S
Sbjct: 167 FYQNSASDAHFFKHVLIVAEEHSEFHYLERFMTVGEGSEKASANIIVEVIAKNGAKVKFS 226
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ + ++ +RG + + W L GE S
Sbjct: 227 AIDQLGE-------HLSTYMNRRGYIM-RDASVDWALGVLNDGNVIADFDSDLVGEGSHA 278
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E ++AIS G Q T++ + A + I+ G+ T+ G + +GA +
Sbjct: 279 ELKAVAISAGRQTQAIDTRVTNKAPYSIGHILQHGVIRERGTLTFNGIGHIIKGAKGADA 338
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + P + + H A+ ++ E ++Y L RG+ +E A L
Sbjct: 339 QQESRVLMLSDQARGDANPILLIDENEVTAGHAASVGRVDPEEMYYLLSRGLHKEEAERL 398
Query: 456 IVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
++ GF+ VL +P+ E E ++I+ L
Sbjct: 399 VIRGFLGSVLTAIPVKEVQKELIEVIEGKL 428
>gi|259047101|ref|ZP_05737502.1| FeS assembly protein SufD [Granulicatella adiacens ATCC 49175]
gi|259036151|gb|EEW37406.1| FeS assembly protein SufD [Granulicatella adiacens ATCC 49175]
Length = 439
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 107/455 (23%), Positives = 185/455 (40%), Gaps = 37/455 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
+ + I S KNEP+W L+ RL T+ P R+++ + SI
Sbjct: 17 ITPEEITAFSLTKNEPEWFLQTRLKGLELAKTLDLPFIERVKFHRWNL-------FQSSI 69
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
S+ + P+++ T + A +VS E +
Sbjct: 70 GEGTSMIEELPKVIPT------------------AAGSAKIVQLGAVSYWEEMNAETAMN 111
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
V+ M + +A+ ++P+LVK Y VPV ++ A ++A+ G F+YIPK V +
Sbjct: 112 DVLVMDLFDALEQYPELVKPYYMTKAVPVDEDSLTAYHAAMVNSGVFIYIPKNVAVEEII 171
Query: 215 STYFRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
++F N + LI+ADE S VSY+E + +N VVE++A A+++
Sbjct: 172 ESHFVQNNLVDEAFVKHVLIVADENSSVSYVERFESVGDKKN-TANIVVEVIAKQGAKVQ 230
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
++ V +V +RG + I+W LRG+ S
Sbjct: 231 FAAVDTLG-------QSTDAYVNRRG-YLEKDATINWALGIMNDGNVIADFDSELRGDGS 282
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ I IS G Q T++ + A ++ I+ G+ S T+ G + +GA +
Sbjct: 283 HSQVNVIGISTGRQVQGIDTRVTNYAPHSVGHILQHGVILDKSTLTFNGIGHIIKGAKFA 342
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ P + + H A+ ++ DE LFY RGI E A
Sbjct: 343 DAQQESRVLMLSEGGRGDANPILLIDENEVTAGHAASVGQVDDEQLFYLTSRGISEAEAK 402
Query: 454 ALIVNGFVREVLQKLPME-FAVEAQKLIDISLEGS 487
L++ GF+ V++ +P E +I+ L S
Sbjct: 403 RLVIRGFLGAVIRSIPSSTLQKELVDMIEQKLVAS 437
>gi|213649930|ref|ZP_03379983.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
Length = 347
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 166/321 (51%), Positives = 219/321 (68%), Gaps = 24/321 (7%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNFVTKRGDCRGMRS 306
GGI NFVTKR +G +
Sbjct: 293 N-TGGILNFVTKRAFAKGKTA 312
>gi|301794002|emb|CBW36400.1| FeS assembly protein SufD [Streptococcus pneumoniae INV104]
gi|332204872|gb|EGJ18937.1| feS assembly protein SufD [Streptococcus pneumoniae GA47901]
Length = 420
Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 178/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ I+ S EP W+ + R A+ + T++ P R+++ + D
Sbjct: 2 TRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
++ + + L L V T +V EL + G
Sbjct: 51 -GTITENEPSANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S ++YLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSNVPFNKHIMIIAGKNSKINYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSY 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|306828011|ref|ZP_07461277.1| FeS assembly protein SufD [Streptococcus pyogenes ATCC 10782]
gi|304429792|gb|EFM32835.1| FeS assembly protein SufD [Streptococcus pyogenes ATCC 10782]
Length = 420
Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats.
Identities = 83/450 (18%), Positives = 170/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EPDW+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPDWLQERRLAALEAIPELELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLILSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|293365605|ref|ZP_06612314.1| FeS assembly protein SufD [Streptococcus oralis ATCC 35037]
gi|307703555|ref|ZP_07640497.1| feS assembly protein SufD [Streptococcus oralis ATCC 35037]
gi|291315973|gb|EFE56417.1| FeS assembly protein SufD [Streptococcus oralis ATCC 35037]
gi|307622962|gb|EFO01957.1| feS assembly protein SufD [Streptococcus oralis ATCC 35037]
Length = 420
Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats.
Identities = 85/451 (18%), Positives = 174/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + +V EL + G
Sbjct: 51 ----------------GTITESELSANVPDFTALDNHLKLVQVGTQTVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGALLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHIMIIAGKNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|56808477|ref|ZP_00366219.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Streptococcus pyogenes M49
591]
gi|209558806|ref|YP_002285278.1| Iron-sulfur cluster assembly protein SufD [Streptococcus pyogenes
NZ131]
gi|209540007|gb|ACI60583.1| Iron-sulfur cluster assembly protein SufD [Streptococcus pyogenes
NZ131]
Length = 420
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 168/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPNLELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 NLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|94989752|ref|YP_597852.1| SufD protein [Streptococcus pyogenes MGAS10270]
gi|94543260|gb|ABF33308.1| SufD protein [Streptococcus pyogenes MGAS10270]
Length = 420
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 169/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPNLELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|307709204|ref|ZP_07645663.1| feS assembly protein SufD [Streptococcus mitis SK564]
gi|307620150|gb|EFN99267.1| feS assembly protein SufD [Streptococcus mitis SK564]
Length = 420
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 85/451 (18%), Positives = 175/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQTPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + +IIA + S +SYLE + + VE++A A++K+
Sbjct: 155 VFYQDSDSDVPLNKHIMIIAGKNSKISYLERLESRGGGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|322375391|ref|ZP_08049904.1| FeS assembly protein SufD [Streptococcus sp. C300]
gi|321279654|gb|EFX56694.1| FeS assembly protein SufD [Streptococcus sp. C300]
Length = 420
Score = 274 bits (700), Expect = 3e-71, Method: Composition-based stats.
Identities = 85/451 (18%), Positives = 175/451 (38%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ + R A+ + +++ P R+++ + D
Sbjct: 2 TKENIKLFSEMHAEPSWLADLRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V L + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------NHLKLVQVGTQTVFEQTPVALAEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P+L++++ + V D+ AA ++A F G+ +YIP V +
Sbjct: 95 VVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + F +IIA + S +SYLE + + VE++A A++K+
Sbjct: 155 IFYQDSDSDVPFNKHIMIIAGKNSKISYLERLESRDEGSAKATANITVEVIARSGAQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + ++++RG G + I W L G S
Sbjct: 215 AAIDRLGE-------NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A+S+G Q T++ + N+ I+ G+ + T+ G + +GA +
Sbjct: 267 ADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ + A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAER 386
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF+ V+ ++P+ E E I+ L
Sbjct: 387 LVVRGFLGSVIVEIPVKEVRDEMIATIEEKL 417
>gi|19745415|ref|NP_606551.1| hypothetical protein spyM18_0275 [Streptococcus pyogenes MGAS8232]
gi|19747525|gb|AAL97050.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 420
Score = 274 bits (700), Expect = 3e-71, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 169/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPELELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRILMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|15807095|ref|NP_295824.1| hypothetical protein DR_2101 [Deinococcus radiodurans R1]
gi|6459895|gb|AAF11649.1|AE002045_9 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 450
Score = 274 bits (700), Expect = 3e-71, Method: Composition-based stats.
Identities = 109/465 (23%), Positives = 200/465 (43%), Gaps = 56/465 (12%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
P+W+ R + ++ P+ W R +DFD L +
Sbjct: 14 PEWLTAKRQQGLDLFTSLDVPTEGVEAWKYTRV-DVDFDALNPH---------------- 56
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
P+ T + +P Q+ L+ V D V T EL GVIF + A
Sbjct: 57 PKREATTDTTKLPASVQKRLSSTDVGAFLVLDGPD-VVYRTELPAELTAKGVIFTDLKTA 115
Query: 166 ICEHPDLVKKYLSTVVP---------------------VGDNFYAALNSAVFTDGSFVYI 204
+ +H D V++YL +VVP + ++AL +A++T+G+FVY+
Sbjct: 116 VEQHADKVQQYLYSVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYV 175
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
P+GV + L ++ ++E GT RTL++ +E + V++++ + VEL
Sbjct: 176 PRGVEVELPLGSFRVMSEAGTYTATRTLVVCEENAQVTFIDE-QDSEELPGTYAIGAVEL 234
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V A ++Y ++QNW G + + +RGD ++ + G ++
Sbjct: 235 VVKQAARLRYVSIQNWGKG-------VTHIQRQRGDV-ERDGTLNSLVVTMGGTLSRTEM 286
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
LRG+ + E ++ +N Q D T H A + S ++ KG++ S + G +
Sbjct: 287 QSYLRGQGADSEMLALYFANDDQHFDHYTLQHHAAAHAHSDLLYKGVNDDTSVGVFSGMI 346
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
V A + + + +L++ + ++P +E + H +TT + E LF+
Sbjct: 347 KVDLDAQKTDAYQKHRTLMLSSEARNFSVPQLEINANDVRCSHGSTTGPVDQEALFFLRS 406
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
RGI E A ++V F+ +VL ++P++ V K I+ + VG
Sbjct: 407 RGISREVAEKMLVTAFLEDVLARVPLQSVV---KYIEGIIAEKVG 448
>gi|71902904|ref|YP_279707.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
gi|71801999|gb|AAX71352.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS6180]
Length = 420
Score = 273 bits (699), Expect = 4e-71, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 169/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPELELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFA-VEAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVHQEIIKVLDEKL 417
>gi|50913620|ref|YP_059592.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
gi|50902694|gb|AAT86409.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS10394]
Length = 420
Score = 273 bits (699), Expect = 4e-71, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 170/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A + ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLEALKAIPELELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKTSANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 GIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTAGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRILMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|21909745|ref|NP_664013.1| hypothetical protein SpyM3_0209 [Streptococcus pyogenes MGAS315]
gi|28895127|ref|NP_801477.1| hypothetical protein SPs0215 [Streptococcus pyogenes SSI-1]
gi|139473100|ref|YP_001127815.1| hypothetical protein SpyM50221 [Streptococcus pyogenes str.
Manfredo]
gi|21903929|gb|AAM78816.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810372|dbj|BAC63310.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|134271346|emb|CAM29564.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
Length = 420
Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 168/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPELELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDVNIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|260584061|ref|ZP_05851809.1| FeS assembly protein SufD [Granulicatella elegans ATCC 700633]
gi|260158687|gb|EEW93755.1| FeS assembly protein SufD [Granulicatella elegans ATCC 700633]
Length = 430
Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats.
Identities = 102/451 (22%), Positives = 184/451 (40%), Gaps = 37/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+ + + S KNEPDW L+ RL A + P R+++ +
Sbjct: 8 SPEQLTSFSLLKNEPDWFLDIRLKALELAKQLPLPFIERVKFHRWNL------------- 54
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
E+ I E++I + V ++K+ +VS E
Sbjct: 55 -------FQSEIGEA--NSLITELEKDIPSAVGSAKIVQLG---AVSYWEEMNVETAMQD 102
Query: 157 VIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
V+ M + EA+ ++P+LVK Y VPV ++ A ++A+ G F+Y+PK V +
Sbjct: 103 VLVMDLFEALQQYPELVKPYYMTKAVPVDEDSLTAYHAAMVNSGIFIYVPKNVVLEDIIE 162
Query: 216 TYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
++F N + LI+A+E S +SY+E + +N +VE++A + A++ +
Sbjct: 163 SHFVQNNTIDEAFVKHVLIVAEENSSLSYVERFESIGDCKN-TANIIVEVIAKEGAKVHF 221
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ V ++ +RG + I W LRG S
Sbjct: 222 AAVDTLGQPTDA-------YINRRG-YLEKDATIEWALGIMNDGNVIADFDSELRGVGST 273
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +AIS G Q T++ + A ++ I+ G+ S T+ G + +GA +
Sbjct: 274 AKVNVVAISTGKQVQGIDTRVTNYANHSVGHILQHGVILDKSTLTFNGIGHIIKGAKFAD 333
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ P + + H A+ ++ DE LFY RGI + A
Sbjct: 334 AQQESRVLMLSEGGRGDANPILLIDENEVTAGHAASVGQVDDEQLFYLTSRGISQAEAKR 393
Query: 455 LIVNGFVREVLQKLPME-FAVEAQKLIDISL 484
L++ GF+ V+ +P + E ++ID L
Sbjct: 394 LVIRGFLGSVISAIPAQNTQKELVEMIDQKL 424
>gi|15674461|ref|NP_268635.1| hypothetical protein SPy_0287 [Streptococcus pyogenes M1 GAS]
gi|71910057|ref|YP_281607.1| ABC transporter [Streptococcus pyogenes MGAS5005]
gi|13621559|gb|AAK33356.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71852839|gb|AAZ50862.1| ABC transporter-associated protein [Streptococcus pyogenes
MGAS5005]
Length = 420
Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats.
Identities = 81/450 (18%), Positives = 168/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPNLELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + + A +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKDAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKVLDEKL 417
>gi|94987876|ref|YP_595977.1| SufD protein [Streptococcus pyogenes MGAS9429]
gi|94991759|ref|YP_599858.1| SufD protein [Streptococcus pyogenes MGAS2096]
gi|94541384|gb|ABF31433.1| SufD protein [Streptococcus pyogenes MGAS9429]
gi|94545267|gb|ABF35314.1| SufD protein [Streptococcus pyogenes MGAS2096]
Length = 420
Score = 272 bits (696), Expect = 8e-71, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 169/450 (37%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLAALEAIPELELPTIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
L + + + +V+ L GV
Sbjct: 51 ---------------GTLTENESLASVPDFIAIGDNPKLVQVGTQTVLEQLPMALIDKGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P++++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFSDFYTALEEIPEVIEAHFGQALAFDEDKLAAYHTAYFNSAAVLYVPDHLEITTPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNATQKISANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ P + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGP-------SVTTYISRRG-RLEKDANIDWALAVMNEGNVIADFDSDLIGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A S+G Q T++ + + T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAASSGRQVQGIDTRVTNYGQRTVGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + A P + + H A+ ++ E ++Y + RG+ +E A L
Sbjct: 328 QQESRVLMLSDQARADANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLNQETAERL 387
Query: 456 IVNGFVREVLQKLPMEFA-VEAQKLIDISL 484
++ GF+ V+ ++P+ E K++D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVHQEIIKVLDEKL 417
>gi|124005856|ref|ZP_01690694.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
gi|123988539|gb|EAY28180.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
Length = 442
Score = 272 bits (696), Expect = 8e-71, Method: Composition-based stats.
Identities = 88/433 (20%), Positives = 169/433 (39%), Gaps = 30/433 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + + P+ ++ + +L K + + P E+
Sbjct: 34 KIRQQAIQSFDGLGFPT---TKHEEWKYTNLG-----KVLKEAYTFGQTSPLQKADIEQF 85
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+P K + V T + + ++ + EA H LV+
Sbjct: 86 FLP----------NMPKANNIVFVNGVYQPTLSQIVSSEDVLVVKNLEEAYDTHTTLVEP 135
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN--EKGTGQFERTLI 233
+ + + + ALN+A DG F+++P YF + G R+LI
Sbjct: 136 HFAQLANSEEEALIALNTAFVQDGVFIHVPANKVVEAPTVLYFINDARNGNVGVQPRSLI 195
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ ++G+ ++++ + AV+E+V NA + + VQN P S
Sbjct: 196 VVEQGAQATFVDKTDTIGGQAS-FSNAVMEVVVEPNARMTHYKVQNDQPNAS-------- 246
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+V + S + T + + + L G + + + G +D+ +
Sbjct: 247 YVGTTQVKQASDSYYANTTISLNGGVIRNNLNIALDGSNVESNMFGLYMLTGNTHVDNHS 306
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
HL ++ S + KG+ G S + GK+ V + A + + Q ++L+ +N +T
Sbjct: 307 VADHLKPHSLSNELYKGVLDGKSTGVFNGKIFVRQDAQKTNAYQQNRNILLSDNSSINTK 366
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-F 472
P +E H ATT + +E LFY RGI A AL+++ F E++ K+ +E
Sbjct: 367 PQLEIWADDVKCSHGATTGNLDEEALFYLRSRGIATNEARALLIHAFGNEIVDKIELEPL 426
Query: 473 AVEAQKLIDISLE 485
V + L+ LE
Sbjct: 427 RVYLENLVMERLE 439
>gi|163849011|ref|YP_001637055.1| FeS assembly protein SufD [Chloroflexus aurantiacus J-10-fl]
gi|222526973|ref|YP_002571444.1| FeS assembly protein SufD [Chloroflexus sp. Y-400-fl]
gi|163670300|gb|ABY36666.1| FeS assembly protein SufD [Chloroflexus aurantiacus J-10-fl]
gi|222450852|gb|ACM55118.1| FeS assembly protein SufD [Chloroflexus sp. Y-400-fl]
Length = 404
Score = 272 bits (696), Expect = 9e-71, Method: Composition-based stats.
Identities = 92/451 (20%), Positives = 171/451 (37%), Gaps = 59/451 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++ + + S EP W+ E R A+ + M P W R +D + A +
Sbjct: 11 ISAEFVVARSQAAGEPAWLTERRREAWAAFAQMNPPEWRRTDLSKLDPTTIAP--ADGAH 68
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
D L
Sbjct: 69 ATAIQWD-----------------------------------------------PALSSQ 81
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GVIF ++ A+ H L+++Y+ T V + ++AL +A++ DG+ +Y+PKGV + L
Sbjct: 82 GVIFTTLAAALHSHEALIQRYMDTAVEPLKHKFSALRAALWQDGALLYVPKGVAIEVPLR 141
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + G F RTL+I + + V+ +E T+P + E+ D A +++
Sbjct: 142 LIYTLGADGVAIFPRTLVIVEPQASVTLIEEFTSPDLRAGSFAGPITEIFVGDGASVRFV 201
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++Q+W G +Y+ +R + + + WT ++ G + L G S
Sbjct: 202 SIQHWGTG-------VYHLGGQRAILQ-RDASLEWTSIQLGGQVQHIEAETTLVGNGSRL 253
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q + M H+ N S + K + + + + G + + +A +
Sbjct: 254 NWLGATFAADSQHLVIAPWMRHVGHNCESFMQFKTVVNDTAYSVFDGMIKIEHESAATST 313
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L + +IP + + H +T+ I +E LFY RGIP A
Sbjct: 314 RLEEHALHLSPKARNDSIPGLMISTNDVLKGGHASTSGDIDEEQLFYMQTRGIPRVEAQR 373
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
+IV GF L+ +P+ E E I +
Sbjct: 374 MIVMGFFEPALETVPLEELRAELTAEIAAKI 404
>gi|116512661|ref|YP_811568.1| hypothetical protein LACR_1973 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108315|gb|ABJ73455.1| ABC-type transport system for Fe-S cluster assembly, permease
component [Lactococcus lactis subsp. cremoris SK11]
Length = 418
Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 170/451 (37%), Gaps = 39/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N+D I S EP W+ + R A + ++ P+ R++ D L
Sbjct: 2 NQD-ILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLT--------- 51
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + S +V+ + L + G
Sbjct: 52 ------------------ISENEEIGSVPTFTEIPNHPLLVQVGSQTVMEQMTKTLAEQG 93
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A+ E P+LV++ +VVP ++ A N+A F G Y+P GV + +
Sbjct: 94 VIFTDFNSALTEIPELVEENFGSVVPFNESRLTAANAATFNSGLVFYVPDGVEVLEPIES 153
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKY 274
F R L+I + + V YLE + + VVE++A A++K+
Sbjct: 154 ILMQEGSSEVPFNKRILLIVGKNAKVDYLERLETSGEQTAKAIANLVVEVIAKAGAQVKF 213
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + V +RG G + + W+ L+G S
Sbjct: 214 AAIDRLGK-------NVTASVIRRGLI-GDNATVDWSVGVMNDGNVVADFDSDLKGNGSH 265
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + IS G Q T++ + N+ I+ G+ T+ + +GA ++
Sbjct: 266 SQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKGAKNAD 325
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
L++ + P + + H A+ ++ +E LFY RG+ EE A
Sbjct: 326 AQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKR 385
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E + I+ L
Sbjct: 386 LVIRGFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|281492385|ref|YP_003354365.1| SUF system FeS cluster assembly protein SufD [Lactococcus lactis
subsp. lactis KF147]
gi|281376049|gb|ADA65540.1| SUF system FeS cluster assembly protein SufD [Lactococcus lactis
subsp. lactis KF147]
Length = 418
Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats.
Identities = 93/447 (20%), Positives = 170/447 (38%), Gaps = 38/447 (8%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
I S EP W+ + R A + ++ P+ R++ D L
Sbjct: 5 ILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLT------------- 51
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ E+ IP + G S +V+ L + GVIF
Sbjct: 52 -ISENEEIESVPTFTEIPNHPLLVQVG-------------SQTVMEQMTPNLAEQGVIFT 97
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
+ A+ E P+L+++ +VVP ++ A N+A F G +Y+P GV + +
Sbjct: 98 DFNSALTEIPELLEENFGSVVPFNESRLTAANTATFNSGLVLYVPDGVEVLEPIESILMQ 157
Query: 221 NEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKYSTVQ 278
F R LII + + V YLE ++ VVE++A A++K++ +
Sbjct: 158 EGSSEVPFNKRILIIVGKNAKVDYLERLETSGEQSSKAKANIVVEVIAKAGAQVKFAAID 217
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ V +RG G + + W+ L+G S +
Sbjct: 218 RLGE-------NVTASVVRRGLI-GDNATVDWSVGVMNDGNVVADFDSDLKGNGSHSQIK 269
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+ IS G Q T++ + N+ I+ G+ T+ + +GA ++
Sbjct: 270 VVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKGAKNADAQQS 329
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ + P + + H A+ ++ +E LFY RG+ EE A L++
Sbjct: 330 SHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKRLVIR 389
Query: 459 GFVREVLQKLPM-EFAVEAQKLIDISL 484
GF+ V+ ++P+ E + I+ L
Sbjct: 390 GFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|222152525|ref|YP_002561700.1| hypothetical protein SUB0344 [Streptococcus uberis 0140J]
gi|222113336|emb|CAR40929.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length = 423
Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 181/439 (41%), Gaps = 37/439 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S K EPDW+++ R A+++ ++ P R+++ + D
Sbjct: 4 DNILRFSQAKAEPDWLVQRRQDAFKKIDELELPRIERVKFHRWNLGD------------- 50
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
PE+ + + I + G QT V+ +L + GV+
Sbjct: 51 -GSIQESPEVTAVPDFVAIGDNPTLLQVGTQT-------------VLEQLPMDLIEKGVV 96
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
F +A+ E P+++++Y + + + AA + A F + +Y+P V + F
Sbjct: 97 FTDFYQALEEIPEIIREYFGSALAYDQDKLAAYHHAYFNSAAVLYVPDFVEISQPIEGIF 156
Query: 219 RINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYST 276
+ F LIIA +GS+ +YLE + + + VE++A ++ IK+S
Sbjct: 157 LQDSDNDVAFNKHILIIAGKGSHFTYLERLESIGQGSAKASANISVEVIAKADSHIKFSA 216
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ + +F+++RG + I W+ L G+ S +
Sbjct: 217 IDRLGE-------TVTSFISRRG-RLETNASIDWSLALMNEGNVVADFDSDLIGDGSQAD 268
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+A S+G Q T++ + KN+ I+ G+ T+ G + +GA +
Sbjct: 269 LKVVAASSGRQVQGIDTRVTNYGKNSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQ 328
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A L+
Sbjct: 329 QESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLV 388
Query: 457 VNGFVREVLQKLPMEFAVE 475
+ GF+ V+ ++P++ E
Sbjct: 389 IRGFLGAVIAEIPVKEVRE 407
>gi|223936151|ref|ZP_03628065.1| FeS assembly protein SufD [bacterium Ellin514]
gi|223895373|gb|EEF61820.1| FeS assembly protein SufD [bacterium Ellin514]
Length = 449
Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 163/443 (36%), Gaps = 29/443 (6%)
Query: 46 AKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
KN P W+ R + R+ + P+ ++ F ++ +
Sbjct: 24 EIKN-PSWLFPIRKASIARFAELGFPT---LKDEDWRFTNVGPITKLPFKPVFTYSKESL 79
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E I + + + V V+ F +++ G+ ++ A
Sbjct: 80 NEAA---------INQFAFTSLKSSKLVFVNGHFSKELSHILPQKD----GIKVGSLAAA 126
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE--K 223
+ L++K+L V ++ALN+A F DG+F+++P G + F
Sbjct: 127 LEADSALLEKHLGRYVKPEGTAFSALNTAFFHDGAFIHVPAGKVIEEPVHLLFVTTSKEP 186
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
GT R LIIA+ GS + +E + V E+V ++A +++ Q+ P
Sbjct: 187 GTTVHPRNLIIAERGSQATVIESYVSTVDGP-YFTNVVSEMVIGEDAVVEHCKFQDESPE 245
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
+ G + G+ ++ L E+ + ++
Sbjct: 246 AFH--------IAAVNVQLGKGCNFIAHSIALGAKLSRNNIWTNLDAERVECVLNGLYLT 297
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q D+ + H + S GI AG S + G++ V A + +LL
Sbjct: 298 KDEQLADNHMIVEHAKPHCNSHEYYNGILAGKSRGVFHGRILVRPDAQKTDAKQTNKNLL 357
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ ++ T P +E H AT ++++E +FY RGI +E A ++++ F E
Sbjct: 358 LSDDATIDTKPQLEIYADDVKCTHGATVGQLNEESIFYLRARGIGKETARRMLIHSFAGE 417
Query: 464 VLQKL-PMEFAVEAQKLIDISLE 485
++ ++ E ++ LE
Sbjct: 418 IIARVRNAALREELDAIVWDRLE 440
>gi|195978802|ref|YP_002124046.1| iron-sulfur cluster assembly protein SufD [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975507|gb|ACG63033.1| iron-sulfur cluster assembly protein SufD [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 420
Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 84/436 (19%), Positives = 176/436 (40%), Gaps = 37/436 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S EP W+ E RL A+ ++ P+ R+++ +F D S+
Sbjct: 2 TKEKILAFSQAHAEPVWLQELRLKAFDVMPHLELPTIERVKFHRWNFGD-------GSLT 54
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L V + + + L V T +V+ EL + G
Sbjct: 55 ESTGLGAVPD---------FMALGDNPKLVQVGTQ-----------TVLEQLPMELIEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F ++ A+ E P+ ++ + + + ++ AA ++A F + +Y+P V +
Sbjct: 95 VVFTDLATALEEIPEQLEAHFGSALAFDEHRLAAYHTAYFNSAAVLYVPDHVEIEQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKY 274
F + F LIIA + S ++YLE + + VE++A + ++IK+
Sbjct: 155 IFLQDSDSDVPFNKHVLIIAGKESKLTYLERFESIGDGTQAASANISVEVIAQEGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ +
Sbjct: 215 SAIDRLGDQ-------VTAYISRRG-RLDRAATIDWALALMNEGNVIADFDSDLIGQGAQ 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A S+G Q T++ + K+T I+ G+ T+ + +GA +
Sbjct: 267 TDVKVVAASSGRQVQGIDTRVTNYGKHTVGHILQHGVILERGTLTFNAIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAER 386
Query: 455 LIVNGFVREVLQKLPM 470
L++ GF+ V+ ++P+
Sbjct: 387 LVIRGFLGAVVAEIPV 402
>gi|125624751|ref|YP_001033234.1| hypothetical protein llmg_1973 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493559|emb|CAL98543.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071550|gb|ADJ60950.1| hypothetical protein LLNZ_10185 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 418
Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 169/451 (37%), Gaps = 39/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N+D I S EP W+ + R A + ++ P+ R++ D L
Sbjct: 2 NQD-ILNFSQMHAEPAWLSDLRQKAALEFKNLELPNIERVKINRWGLDHLT--------- 51
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + + S +V+ L + G
Sbjct: 52 ------------------ISENEEIGSVPTFTEIPNHPLLVQVGSQTVMEQMTPTLAEQG 93
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VIF + A+ E P+LV++ +VVP ++ A N+A F G +Y+P GV + +
Sbjct: 94 VIFTDFNSALTEIPELVEENFGSVVPFNESRLTAANAATFNSGLVLYVPDGVEVLEPIES 153
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F R L+I + + V YLE + VVE++A A++K+
Sbjct: 154 ILMQEGSSEIPFNKRILLIVGKNAKVDYLERLETSGEQTAKATANLVVEVIAKAGAQVKF 213
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + V +RG G + + W+ L+G S
Sbjct: 214 AAIDRLGK-------NVTASVIRRGLI-GDNATVDWSVGVMNDGNVVADFDSDLKGNGSH 265
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + IS G Q T++ + N+ I+ G+ T+ + +GA ++
Sbjct: 266 SQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKGAKNAD 325
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
L++ + P + + H A+ ++ +E LFY RG+ EE A
Sbjct: 326 AQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKR 385
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L++ GF+ V+ ++P+ E + I+ L
Sbjct: 386 LVIRGFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|24378757|ref|NP_720712.1| putative ABC transporter, membrane protein [Streptococcus mutans
UA159]
gi|24376626|gb|AAN58018.1|AE014874_4 putative ABC transporter, membrane protein [Streptococcus mutans
UA159]
Length = 420
Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 92/451 (20%), Positives = 179/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S K EP W+ E RL A+ + ++ P R+++ + D +P S
Sbjct: 2 TKESILTFSQSKAEPAWLQEKRLAAFDKIDDLELPRIERVKFQRWNLGDGTITESPISAN 61
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
P E L + T +V+ + +L + G
Sbjct: 62 VPDFTSF----------------GENPKLVQLGTQ-----------TVLESLPAKLVEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ E P +++KY +T + ++ +A ++A F GS +Y+P V + L
Sbjct: 95 VVFTDFHSALEEIPQVIEKYFATALKFDEDKLSAYHTAYFNSGSVLYVPDNVEIDLPLEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + LIIA + V+YLE + + VE++A +++K+
Sbjct: 155 IFLQDSTSNVPLNKHVLIIAGRHAKVNYLERFETIGDSDVKATANIAVEVLAQAGSQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + I ++++RG + I W L G S
Sbjct: 215 AAIDRLG-------NNITTYISRRG-RLDNDASIDWALGVMNEGNVIADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E +A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 AELKVVAASSGRQIQGIDTRVTNYGNNSIGHILQHGVILERGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RGI +E A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGIDKETAER 386
Query: 455 LIVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
L++ GF+ V+ ++P++ E ++D L
Sbjct: 387 LVIRGFLGTVITEIPVKAVRDEMIAVLDEKL 417
>gi|332686999|ref|YP_004456773.1| iron-sulfur cluster assembly protein SufD [Melissococcus plutonius
ATCC 35311]
gi|332371008|dbj|BAK21964.1| iron-sulfur cluster assembly protein SufD [Melissococcus plutonius
ATCC 35311]
Length = 428
Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats.
Identities = 108/452 (23%), Positives = 182/452 (40%), Gaps = 42/452 (9%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDD--LYYYAAPKSIV 96
+ I+ SA+K EP WM E RL A + + P R+ Y + + Y
Sbjct: 11 EDIKAFSAEKEEPTWMSELRLDALKNVDELDLPKVDRVNYKRWPLFNVNINNY------- 63
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
PE L + + + + S + + L + G
Sbjct: 64 ------TPQPESLADFNQF---------------ADHSAIIQKSSFNQFEQLSKTLAEQG 102
Query: 157 VIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF + A+ E PDLVK+Y V +N A+++A G F+YIPK V L
Sbjct: 103 VIFTDLFTALLEFPDLVKEYYMTKAVKTDENKLTAVHTAFMNSGIFIYIPKNVVIKETLE 162
Query: 216 TYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIK 273
T F + F+ LIIA+E S +SYLE + + + VVE++A A+IK
Sbjct: 163 TLFIQDTDSDQPLFKHVLIIAEENSEMSYLERFQSTEDTLKSVSGNIVVEVIAKRGAKIK 222
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y+ V I +++ R ++I WT T + L G+ +
Sbjct: 223 YTAVDQLGK-------NITSYIH-RCCYLMQDAQIDWTIGAMNDGNTISNFNAELAGKGA 274
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
E AIS+ Q T++ + +T S I G+ S T+ G + +GA +
Sbjct: 275 SAEVKVTAISSEKQIQGMNTQISNRCAHTVSHIQQHGVVLDASTLTFNGICHLLKGAKEA 334
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ L++ + P + + H A+ ++ + L+Y + RG+ ++ A
Sbjct: 335 DAQQENRVLMLSDKARGDANPILLIDENDVTAGHAASVGSLNADDLYYLMSRGLSKQVAE 394
Query: 454 ALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
LIV+GF+ ++ + E + +ID L
Sbjct: 395 RLIVHGFLTPMISTISNKEVQEKMMVIIDRKL 426
>gi|323126576|gb|ADX23873.1| SufD protein [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 420
Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 175/450 (38%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A + ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLEALKAMPNLELPAIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
+ EL + + I + G QT V+ EL GV
Sbjct: 51 --GTLTENDELANVPDFMAIGDNPTLVQVGTQT-------------VLEQLPMELINQGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P+++ + V ++ AA ++A F + +Y+P + +
Sbjct: 96 VFTDFYTALEEIPEVIAAHFGQAVAFDEDKLAAYHTAYFNSAAVLYVPDHLEITAPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNGSQKASANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGS-------SVTTYMSRRG-RLDKDASIDWALSIMNEGNVVADFDSDLVGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A+S+G Q T++ + ++T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAVSSGRQVQGIDTRVTNYGQHTIGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A L
Sbjct: 328 QQESRVLMLSDQARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K +D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKGLDGKL 417
>gi|225867880|ref|YP_002743828.1| FeS assembly protein SufD [Streptococcus equi subsp. zooepidemicus]
gi|225701156|emb|CAW98045.1| FeS assembly protein SufD [Streptococcus equi subsp. zooepidemicus]
Length = 420
Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats.
Identities = 85/436 (19%), Positives = 176/436 (40%), Gaps = 37/436 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S EP W+ E RL A+ ++ P+ R+++ +F D S+
Sbjct: 2 TKEKILAFSQAHAEPVWLQELRLKAFDVMPHLELPTIERVKFHRWNFGD-------GSLT 54
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L V + + + L V T +V+ EL + G
Sbjct: 55 ESTGLGAVPD---------FMALGDNPKLVQVGTQ-----------TVLEQLPMELIEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F ++ A+ E P+ ++ + + + ++ AA ++A F + +Y+P V +
Sbjct: 95 VVFTDLATALEEIPEQLEAHFGSALAFDEHRLAAYHTACFNSAAVLYVPDHVEIEQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKY 274
F + F LIIA + S ++YLE + + VE++A + ++IK+
Sbjct: 155 IFLQDSDSNVPFNKHVLIIAGKESKLTYLERFESVGDGTQAASANISVEVIAQEGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGDQ-------VTAYISRRG-RLDRAATIDWALALMNEGNVIADFDSDLIGQGSQ 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A S+G Q T++ + K+T I+ G+ T+ + +GA +
Sbjct: 267 ADVKVVAASSGRQVQGIDTRVTNYGKHTVGHILQHGVILERGTLTFNAIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAER 386
Query: 455 LIVNGFVREVLQKLPM 470
L++ GF+ V+ ++P+
Sbjct: 387 LVIRGFLGAVVAEIPV 402
>gi|172058344|ref|YP_001814804.1| FeS assembly protein SufD [Exiguobacterium sibiricum 255-15]
gi|171990865|gb|ACB61787.1| FeS assembly protein SufD [Exiguobacterium sibiricum 255-15]
Length = 425
Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats.
Identities = 96/453 (21%), Positives = 190/453 (41%), Gaps = 39/453 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
N + + + + EP WM+ R A T+ P +I+ +F +
Sbjct: 10 NREAVAERATRLGEPAWMITKRQDALDLAPTLALPKVEKIKIGGWNFTE--------GTA 61
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+++ + P++ E L G + + + V E +G
Sbjct: 62 DLETVTGLTPDI--------------ESLIGENRDHMLIT--RNGQLVHAQNSE--ATNG 103
Query: 157 VIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VIF + +A+ HP+LV+KY T V V ++ AALN+A+ G+F+Y+PKG++ + +
Sbjct: 104 VIFTTLEDAMKHHPELVEKYFMTEGVNVNEDRLAALNAALMNGGTFLYVPKGLKLTVPMQ 163
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + + G + +IIAD S ++Y+E + + V E+ DNA++ +
Sbjct: 164 AIYTLEQTGGALYHHAIIIADADSELTYIENFVSYG-EGAHNVNVVTEVFVEDNAKVLFG 222
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V G ++ +RG + +K+ W T L G S
Sbjct: 223 GVDTLAKGA-------VTYMNRRGVVK-QGAKLEWALGHMNDGHTITETKTHLVGNDSFS 274
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G Q+ + + H K + I+ G+ + + + G +H GA+ S
Sbjct: 275 DTKAVTVGRGEQKQNFNVRTDHFGKGSEGFILIHGVQKDSATSIFNGTSMIHHGASKSNG 334
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L++ P + H A+ ++ + L+Y + RG+ + A L
Sbjct: 335 VQTERVLMLSEKARGDANPILLIDEDDVMAGHAASVGRVDELQLYYLMSRGLSRKEAERL 394
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+V+GF++ V+ +L ++ E +L+ + +EG V
Sbjct: 395 VVHGFLQPVVSELAIDSVKE--RLVQV-IEGKV 424
>gi|290581235|ref|YP_003485627.1| putative ABC transporter membrane protein [Streptococcus mutans
NN2025]
gi|254998134|dbj|BAH88735.1| putative ABC transporter membrane protein [Streptococcus mutans
NN2025]
Length = 420
Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 178/451 (39%), Gaps = 38/451 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S K EP W+ E RL A+ + ++ P R+++ + D +P S
Sbjct: 2 TKESILTFSQSKAEPAWLQEKRLAAFDKIDDLELPRIERVKFQRWNLGDGTITESPISAN 61
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
P E L + T +V+ + L + G
Sbjct: 62 VPDFTSF----------------GENPKLVQLGTQ-----------TVLESLPANLGEQG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F A+ + P +++K+ +T + ++ +A ++A F G+ +Y+P V + L
Sbjct: 95 VVFTDFHSALEKIPQVIEKHFATALKFDEDKLSAYHTAYFNSGAVLYVPDNVEIDLPLEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKY 274
F + LIIA + V+YLE + + VE++A +++K+
Sbjct: 155 IFLQDSTSNVPLNKHVLIIAGRHAKVNYLERFETVGDSDVKATANIAVEVLAQAGSQVKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + I ++++RG + I W L G S
Sbjct: 215 AAIDRLG-------NNITTYISRRG-RLDNDASIDWALGVMNEGNVIADFDSDLIGNGSH 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
E +A S+G Q T++ + N+ I+ G+ T+ G + +GA +
Sbjct: 267 AELKVVAASSGRQIQGIDTRVTNYGNNSIGHILQHGVILERGTLTFNGIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RGI +E A
Sbjct: 327 AQQESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGIDKETAER 386
Query: 455 LIVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
L++ GF+ V+ ++P++ E ++D L
Sbjct: 387 LVIRGFLGTVITEIPVKAVRDEMIAVLDEKL 417
>gi|549518|sp|P35912|YCF24_GALSU RecName: Full=UPF0051 protein in atpA 3'region; AltName: Full=ORF X
gi|629439|pir||S39522 hypothetical protein X - red alga (Cyanidium caldarium) chloroplast
(fragment)
gi|429180|emb|CAA48016.1| orfX [Galdieria sulphuraria]
Length = 221
Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats.
Identities = 142/221 (64%), Positives = 177/221 (80%)
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
N+E+KYSTVQNWY GD GKGGIYNFVTKRG C SKISWTQ+ETGSAITWKYPSC+L
Sbjct: 1 NSEVKYSTVQNWYSGDENGKGGIYNFVTKRGLCAESNSKISWTQVETGSAITWKYPSCIL 60
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
G S GEFYS+A++N +QQ D+G+KM+H+ KN+ S+I+SKGIS G S N+YRGKV V
Sbjct: 61 AGNNSKGEFYSVALTNHYQQADTGSKMIHIGKNSRSKIISKGISTGNSINSYRGKVKVSL 120
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
A+ +RN++QCDSLLIGN+ A+T PYIE N S +EHEA+ SKI++E LFY +QRGI
Sbjct: 121 NASRARNYSQCDSLLIGNSSEANTFPYIEVYNRSSIIEHEASISKINEEKLFYFMQRGIS 180
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
E AI+LIV+GF +EV +LP+EFA+EA KL+ + LEGSVG
Sbjct: 181 IEEAISLIVSGFCKEVFTELPLEFALEADKLLGLKLEGSVG 221
>gi|255039511|ref|YP_003090132.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
gi|254952267|gb|ACT96967.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
Length = 439
Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats.
Identities = 93/452 (20%), Positives = 168/452 (37%), Gaps = 41/452 (9%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
LN + KK E R+ + PS I++ + ++ +
Sbjct: 23 LNGEASSEFHQKKRE----------GLARFEKLGFPS---IKHEEWKYSNVRDLISVSYD 69
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+S + E L +P +E IL V A + S
Sbjct: 70 FNAESSIGLAE-----LEDLKVPAQEANILYFVNGRYDASLSTIISPV-----------E 113
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
+ ++EA P V + + + ++ + ALN+A DG F++IP +
Sbjct: 114 KITISSLAEAYKNDPAKVASFFNELTKDAEDAFTALNTAFTQDGVFIHIPDNQSVEHPII 173
Query: 216 TYFRIN--EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
F + E+ G R +I + ++V E + AV E+ + A ++
Sbjct: 174 LRFVSDAREQHVGSQPRNIIWVGKNAHVKMAEAFRTLGDQRS-FTNAVTEIHVAEEANVQ 232
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y VQN Y+ T + + T + T + +L GE
Sbjct: 233 YYKVQN-------ESENAYHIGTTQVRMLDRSHFYAGT-VTLNGKFTRNNLNIVLDGEHC 284
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
Y + +G Q +D+ T H N+ S + KGI S + GK+ V A +
Sbjct: 285 DAHMYGLYFPDGSQHVDNHTVADHQKPNSESNELYKGILRDKSKGVFNGKIFVRPDAQKT 344
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
F C ++++ + +T P +E H TT +I +E LFY RGI + A+
Sbjct: 345 NAFQSCKNIVLSPDATMNTKPQLEIFADDVKCSHGTTTGQIDEEALFYMRSRGISQPEAM 404
Query: 454 ALIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
+L++ F +V+ ++ ++ E + +I L
Sbjct: 405 SLLMFAFCADVVSQIKIDSIREYLENVITQKL 436
>gi|328956791|ref|YP_004374177.1| FeS assembly protein SufD [Carnobacterium sp. 17-4]
gi|328673115|gb|AEB29161.1| FeS assembly protein SufD [Carnobacterium sp. 17-4]
Length = 428
Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats.
Identities = 98/434 (22%), Positives = 178/434 (41%), Gaps = 35/434 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D ++ S EP WM+E+R A + +++ PS+ R++Y
Sbjct: 11 DSVQQFSLMHEEPLWMMEFRKSALTKINSLELPSFERVKYQRWPL--------------- 55
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++ + + ++ L G + + + +V+ + + GVI
Sbjct: 56 -------LQVPDLFSYEEGIMLAEDFLTGDSDAPRVIQVG--NQTVMEQLPMKYIEQGVI 106
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ EHPDLVKK V ++ A ++A T G F+Y+PK V L
Sbjct: 107 FTDIFTALQEHPDLVKKVYMKLAVEHDEDKLTAFHAAFMTSGLFLYVPKNVVIDEPLEAL 166
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
F N + + LI AD S +Y+E ++N +VE++A A++K+S
Sbjct: 167 FVQNSQVRNSWIKHVLIFADTNSEFTYVEKYETIGTEQN-AANIIVEVIANPGAKVKFSA 225
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V ++ +RG + I W + L GE + E
Sbjct: 226 VDQIGE-------TTTTYINRRGYAL-KDATIEWAIGVMNAGNVIADFDTDLIGEGAHSE 277
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+AIS G Q T++ + +NT I+ G+ S T+ G + +GA +
Sbjct: 278 VKVVAISMGKQIQGIDTRVTNYGRNTIGHILQHGVILEKSTLTFNGIGHIIKGAKGADAQ 337
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ + P + + H A+ ++ E+L+Y + RGIP++ A L+
Sbjct: 338 QESRILMLSEHARGDANPILLIDENDVTAGHAASVGRVDPENLYYLMSRGIPKQEAERLV 397
Query: 457 VNGFVREVLQKLPM 470
+ GF+ V+ +P+
Sbjct: 398 IRGFLGSVIAAIPL 411
>gi|225871206|ref|YP_002747153.1| FeS assembly protein SufD [Streptococcus equi subsp. equi 4047]
gi|225700610|emb|CAW95146.1| FeS assembly protein SufD [Streptococcus equi subsp. equi 4047]
Length = 420
Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 169/436 (38%), Gaps = 37/436 (8%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I S EP W+ E RL A+ ++ P+ R+++ +F D
Sbjct: 2 TKEKILAFSQAHAEPTWLQELRLKAFDVMPHLELPTIERVKFHRWNFGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
L + + + +V+ EL + G
Sbjct: 51 ----------------GSLTESTALGTVPDFMALGDNPKLVQVGTQTVLEQLPMELIEKG 94
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+F ++ A+ E P+ ++ + + + ++ AA ++A F + +Y+P V +
Sbjct: 95 VVFTDLATALDEIPEQLEAHFGSALAFDEHRLAAYHTAYFNSAAVLYVPDHVEIEQPIEG 154
Query: 217 YFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRD-ENQLHAAVVELVALDNAEIKY 274
F + F LIIA + S ++YLE + + VE++A ++IK+
Sbjct: 155 IFLQDGDSDVPFNKHVLIIAGKESKLTYLERFESIGDKTQAASANISVEVIAQAGSQIKF 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S + + ++++RG + I W L G+ S
Sbjct: 215 SAIDRLGDQ-------VTAYISRRG-RLDHAATIDWALALMNEGNVIADFDSDLIGQGSQ 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ +A S+G Q T++ + K+T I+ G+ T+ + +GA +
Sbjct: 267 ADVKVVAASSGRQVQGIDTRVTNYGKHTVGHILQHGVILERGTLTFNAIGHIIKGAKGAD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ L++ + + P + + H A+ ++ E ++Y + RG+ +E A
Sbjct: 327 AQQESRVLMLSDQARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQETAER 386
Query: 455 LIVNGFVREVLQKLPM 470
L++ GF+ V+ ++P+
Sbjct: 387 LVIRGFLGAVVAEIPV 402
>gi|167470823|ref|ZP_02335527.1| FeS assembly protein SufB [Yersinia pestis FV-1]
Length = 321
Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats.
Identities = 166/315 (52%), Positives = 213/315 (67%), Gaps = 30/315 (9%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T++ D+ KG+NE+++R ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSDGRYKEGFFTHLATDELAKGINEEVVRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 75
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD---------------------PELLRTY 112
+ Y +D+ D YY+AP + D E+ +
Sbjct: 76 LKAHYQGLDYQDYSYYSAPSCGSCDDNCDSQPGAVQQSSADGSAPSNANEYLTAEVESAF 135
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+LGIP+RE ++VAVDA+FDSVSV TT++E+L G++F EAI E+PDL
Sbjct: 136 AQLGIPVRE--------GAEVAVDAIFDSVSVATTYREKLAGQGILFCSFGEAIQEYPDL 187
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
V+KYL +VVP DNF+AALN+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT+
Sbjct: 188 VQKYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTI 247
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+IADEGSYVSY+EGC+AP RD QLHAAVVE++ NAE+KYSTVQNW+ G GGI
Sbjct: 248 LIADEGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQNWFAGS-DSTGGIL 306
Query: 293 NFVTKRGDCRGMRSK 307
NFVTKR C G SK
Sbjct: 307 NFVTKRALCEGEGSK 321
>gi|332523352|ref|ZP_08399604.1| FeS assembly protein SufD [Streptococcus porcinus str. Jelinkova
176]
gi|332314616|gb|EGJ27601.1| FeS assembly protein SufD [Streptococcus porcinus str. Jelinkova
176]
Length = 421
Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats.
Identities = 86/449 (19%), Positives = 172/449 (38%), Gaps = 38/449 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ I S K EP W+ E R A+ ++ P R+++ + D
Sbjct: 4 ETIMAFSQGKAEPAWLQERRREAFHLIDYLELPIIERVKFHRWNLGD------------- 50
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++ E ++ + + +V+ EL + GV+
Sbjct: 51 --------------GRIEDSPFEAKVPDFIAIGDNPTLVQNGTQTVMEQLPMELHEQGVV 96
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
F A+ E PD++ Y T + + +A ++A F + +Y+P V + F
Sbjct: 97 FTDFYSALEEIPDIIHAYFGTAIEDNQDKLSAYHTAYFNSAAVLYVPDFVEIEQPIEAIF 156
Query: 219 RINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYST 276
+ F LIIA S SYLE + +D + VE++A + IK+S
Sbjct: 157 LQDSDSEVPFNKHVLIIAGRESQFSYLERFESYGQDSAKATANISVEVIAQAGSRIKFSA 216
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ + ++++RG + I W+ L G+ S +
Sbjct: 217 IDRLGK-------SVTTYISRRG-RLADNATIDWSLSIMNEGNVVADFDSDLLGDGSQAD 268
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+A S+G Q T++ + KN+ I+ G+ T+ G + +GA +
Sbjct: 269 LKVVAASSGRQIQGIDTRVTNYGKNSVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQ 328
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A L+
Sbjct: 329 QESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLV 388
Query: 457 VNGFVREVLQKLPM-EFAVEAQKLIDISL 484
+ GF+ V+ ++P+ E ++D L
Sbjct: 389 IRGFLGAVITEIPIKEVRDNIIAVLDQKL 417
>gi|209963826|ref|YP_002296741.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
gi|209957292|gb|ACI97928.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
Length = 439
Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats.
Identities = 86/425 (20%), Positives = 148/425 (34%), Gaps = 29/425 (6%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E R R++ P+ + + F L + P V + T
Sbjct: 29 WLDELRAAGLDRFVKTGFPTPRQ---ESWKFTSLRPLERQSFGLAPALTAPVPAASIPTV 85
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
G L G ++ G + EA+ PD
Sbjct: 86 APDGGS-HRMVFLGGRYRPDLSDIGGL--------------PPGATLESLGEALVRAPDG 130
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TGQFER 230
V ++L + + ALN A TDG + + +G + F ++ G R
Sbjct: 131 VAEHLGRTATLDGHPLLALNLAFLTDGVVLRLARGTVVAKPVELVFLSSDDGLPAAWHPR 190
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
L++A+E + + +E V E+V A + + +Q
Sbjct: 191 ILVLAEENAEATLVEHHVGLG-SATCFSNIVAEIVLGAGARLHHYKIQRESLSTIHLATT 249
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ G + L G+A++ +L G + G Q D
Sbjct: 250 TAH--------VGRDATYDTFILNLGAALSRHEGRSVLEGTGTTCRISGAYAVRGTQHTD 301
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + H TSR V KG+ G + ++GK+ V A + + +LL+ +
Sbjct: 302 ITTLIDHAKPRGTSREVVKGVIDGQARAVFQGKIIVRPDAQKTDGYQLNRALLLSDQAEI 361
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+ P +E H AT ++ D LFY RG+P E A AL++ F+ E L+++P+
Sbjct: 362 DSKPELEIYADDVKCSHGATAGELDDAQLFYLRSRGLPLERARALLIAAFLDEALEEIPV 421
Query: 471 EFAVE 475
E E
Sbjct: 422 EAVRE 426
>gi|322411111|gb|EFY02019.1| SufD protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 420
Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 175/450 (38%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A + ++ P+ RI++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLEALKAMPNLELPAIERIKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
+ EL + + I + G QT V+ EL GV
Sbjct: 51 --GTLTENDELANVPDFMAIGDNPTLVQVGTQT-------------VLEQLPMELINQGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P+++ + + ++ AA ++A F + +Y+P + +
Sbjct: 96 VFTDFYTALEEIPEVIAAHFGQAIAFDEDKLAAYHTAYFNSAAILYVPDHLEITAPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNASQKASANISVEVIAKAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGS-------SVTTYISRRG-RLDKDASIDWALSIMNEGNVVADFDSDLVGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A+S+G Q T++ + ++T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAVSSGRQVQGIDTRVTNYGQHTIGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A L
Sbjct: 328 QQESRVLMLSDQARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDTAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K +D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKGLDGKL 417
>gi|15673774|ref|NP_267949.1| hypothetical protein L33412 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724816|gb|AAK05890.1|AE006408_14 hypothetical protein L33412 [Lactococcus lactis subsp. lactis
Il1403]
Length = 418
Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats.
Identities = 88/447 (19%), Positives = 166/447 (37%), Gaps = 38/447 (8%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
I S EP W+ + R A + ++ P+ R++ D L
Sbjct: 5 ILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLS------------- 51
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + + + S +V+ L + GVIF
Sbjct: 52 --------------ISENEEIGSVPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFT 97
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
+ A+ E P+L+++ +VVP ++ A N+ F G +Y+P GV + +
Sbjct: 98 DFNSALTEIPELLEENFGSVVPFNESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQ 157
Query: 221 NEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKYSTVQ 278
F R LII + + V YLE ++ VVE++A A++K++ +
Sbjct: 158 EGSSEVPFNKRILIIVGKNAKVDYLERLETSDEQSSKAKANIVVEVIAKAGAQVKFAAID 217
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ V +RG G + + W+ L+G S +
Sbjct: 218 RLGE-------NVTASVVRRGLI-GDNATVDWSVGVMNDGNVVADFDSDLKGNGSHSQIK 269
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+ IS G Q T++ + N+ I+ G+ T+ + +GA ++
Sbjct: 270 VVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKGAKNADAQQS 329
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ + P + + H A+ ++ +E LFY RG+ EE A L++
Sbjct: 330 SHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKRLVIR 389
Query: 459 GFVREVLQKLPM-EFAVEAQKLIDISL 484
GF+ V+ ++P+ E + I+ L
Sbjct: 390 GFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|251781770|ref|YP_002996072.1| iron-sulfur cluster assembly protein [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242390399|dbj|BAH80858.1| iron-sulfur cluster assembly protein [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 420
Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 175/450 (38%), Gaps = 39/450 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
E ++ S EP W+ E RL A + ++ P+ R+++ + D
Sbjct: 4 EKLV-AFSQAHAEPAWLQERRLEALKAMPNLELPAIERVKFHRWNLGD------------ 50
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
+ EL + + I + G QT V+ EL GV
Sbjct: 51 --GTLTENDELANVPDFMAIGDNPTLVQVGTQT-------------VLEQLPMELINQGV 95
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+F A+ E P+++ + V ++ AA ++A F + +Y+P + +
Sbjct: 96 VFTDFYTALEEIPEVIATHFGQAVAFDEDKLAAYHTAYFNSAAVLYVPDHLEITAPIEAI 155
Query: 218 FRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYS 275
F + F L+IA + S +YLE + + VE++A ++IK+S
Sbjct: 156 FLQDSDSDVPFNKHVLVIAGKESKFTYLERFESIGNGSQKASANISVEVIAQAGSQIKFS 215
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ + ++++RG + I W L G+ S
Sbjct: 216 AIDRLGS-------SVTTYMSRRG-RLDKDASIDWALSIMNEGNVVADFDSDLVGQGSQA 267
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +A+S+G Q T++ + ++T I+ G+ T+ G + +GA +
Sbjct: 268 DLKVVAVSSGRQVQGIDTRVTNYGQHTIGHILQHGVILERGTLTFNGIGHILKGAKGADA 327
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A L
Sbjct: 328 QQESRVLMLSDQARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDQDIAERL 387
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
++ GF+ V+ ++P+ E K +D L
Sbjct: 388 VIRGFLGAVIAEIPIPSVRQEIIKGLDGKL 417
>gi|326407280|gb|ADZ64351.1| Fe-S cluster assembly protein SufD [Lactococcus lactis subsp.
lactis CV56]
Length = 418
Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats.
Identities = 89/447 (19%), Positives = 166/447 (37%), Gaps = 38/447 (8%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
I S EP W+ + R A + ++ P+ R++ D L
Sbjct: 5 ILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLS------------- 51
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + + + S +V+ L + GVIF
Sbjct: 52 --------------ISENEEIGSVPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFT 97
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
+ A+ E P+L+++ +VVP ++ A N+ F G +Y+P GV + +
Sbjct: 98 DFNSALTEIPELLEENFGSVVPFNESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQ 157
Query: 221 NEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKYSTVQ 278
F R LII + + V YLE ++ VVE++A A++K++ +
Sbjct: 158 EGSSEVPFNKRILIIVGKNAKVDYLERLETTDEQSSKAKANIVVEVIAKAGAQVKFAAID 217
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ V +RG G + + W+ L+G S +
Sbjct: 218 RLGE-------NVTASVVRRGLI-GDNATVDWSVGVMNDGNVVADFDSDLKGNGSHSQIK 269
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
I IS G Q T++ + N+ I+ G+ T+ + +GA ++
Sbjct: 270 VIGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKGAKNADAQQS 329
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ + P + + H A+ ++ +E LFY RG+ EE A L++
Sbjct: 330 SHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKRLVIR 389
Query: 459 GFVREVLQKLPM-EFAVEAQKLIDISL 484
GF+ V+ ++P+ E + I+ L
Sbjct: 390 GFLGSVVSEIPVKSVQAEFIETIERKL 416
>gi|313890313|ref|ZP_07823945.1| FeS assembly protein SufD [Streptococcus pseudoporcinus SPIN 20026]
gi|313121299|gb|EFR44406.1| FeS assembly protein SufD [Streptococcus pseudoporcinus SPIN 20026]
Length = 421
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 89/449 (19%), Positives = 173/449 (38%), Gaps = 38/449 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ I S K EP W+ E R A+ ++ P R+++ + D
Sbjct: 4 ENIMAFSQGKAEPVWLQERRQKAFHLIDHLELPIIERVKFHRWNLGD------------G 51
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ D + + LG + + +V+ EL + GV+
Sbjct: 52 RIEDSPFEATVPDFIALGDNP---------------ILVQNGTRTVMEQLPMELHEQGVL 96
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
F A+ E PD++ Y T + + +A ++A F + +Y+P V L F
Sbjct: 97 FTDFYSALEEIPDIIHAYFGTAIEDNQDKLSAYHTAYFNSAAVLYVPDFVEIKQPLEAIF 156
Query: 219 RINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYST 276
N F LIIA S SYLE + ++ + VE++A + IK+S
Sbjct: 157 LQNSDSEVPFNKHVLIIAGRESQFSYLERFESYGQNSAKASANISVEVIAQAGSRIKFSA 216
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ + ++++RG + I W+ L G+ S +
Sbjct: 217 IDRLGK-------SVTTYISRRG-RLAENATIDWSLSIMNEGNVIADFDSDLLGDGSHAD 268
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+A S+G Q T++ + KN+ I+ G+ T+ G + +GA +
Sbjct: 269 LKVVAASSGRQIQGIDTRVTNYGKNSIGHILQHGVILEKGTLTFNGIGHIIKGAKGADAQ 328
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ + + P + + H A+ ++ E ++Y + RG+ ++ A L+
Sbjct: 329 QESRVLMLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDKDTAERLV 388
Query: 457 VNGFVREVLQKLPM-EFAVEAQKLIDISL 484
+ GF+ V+ ++P+ E ++D L
Sbjct: 389 IRGFLGAVITEIPVKEVRDNIIAVLDQKL 417
>gi|325286420|ref|YP_004262210.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
gi|324321874|gb|ADY29339.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
Length = 455
Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats.
Identities = 101/444 (22%), Positives = 159/444 (35%), Gaps = 44/444 (9%)
Query: 56 EWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
+ R A + + T PS W ++ D + +S + + + +
Sbjct: 43 DVRTEAIKNFETKGFPSKKEEAWKYTSLNSLQKIDFSIFPKKESSLEYKDVKKYFIHQID 102
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI-CEH 169
TY V VD V+ S E GV +S A+
Sbjct: 103 TY------------------KIVFVDGVYSSNL------SETTHDGVDICLMSAALTKPM 138
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF- 228
V V D+ LN+A +G+++YIPK +
Sbjct: 139 YKAVIDVYFNKVASKDDSLTTLNTAFSREGAYIYIPKNKVPKKPIEIIHFSTGNDAALML 198
Query: 229 -ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R LIIA+E S + +E + L V E+ A NA + Y VQN S
Sbjct: 199 QPRNLIIAEENSEMQIIERHQSLT-SNEVLTNCVTEIFAAKNAIVDYYKVQNDVDSASLI 257
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ S + G + + GE+ I I Q
Sbjct: 258 DNT--------YVDQKDGSHVKVHTFSFGGKLMRNNLNFYQNGERIDSTMKGITIIGDKQ 309
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D T + H+ N S KGI A + + GK+ V + A + F Q +++LI +
Sbjct: 310 HVDHHTLVHHIEPNCESHQDYKGIYADSATGVFNGKIIVDKIAQKTNAFQQNNNILISDK 369
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ- 466
+T P +E H T ++ +E LFY RGIP++ A AL++ F VL+
Sbjct: 370 ATINTKPQLEIFADDVKCSHGCTIGQLDEEALFYLQSRGIPKKEARALLMYAFANNVLES 429
Query: 467 -KLPMEFAVEAQKLIDISLEGSVG 489
++P E V KLI L ++G
Sbjct: 430 VRIP-ELKVRINKLIANKLGVNLG 452
>gi|209516301|ref|ZP_03265158.1| FeS assembly protein SufD [Burkholderia sp. H160]
gi|209503237|gb|EEA03236.1| FeS assembly protein SufD [Burkholderia sp. H160]
Length = 441
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/436 (20%), Positives = 164/436 (37%), Gaps = 30/436 (6%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ R A+ + + P+ R + ++ A + P
Sbjct: 27 WLRRARHDAFETFEALGFPT---TRLEDWKYTNVATIAK-------RPWHFTSP------ 70
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ P E+ + V + V + + + ++ A+ E P+
Sbjct: 71 -RSDEPDVERIVDQLVPDTTVGRLVFMNGHHIPRLSRVPALPDAAFVGSLTRALREMPER 129
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
+ ++ P + +AALN+A +DG V +P L F +E G
Sbjct: 130 LMGVIAHQAP--HDGFAALNTAFLSDGYVVLLPPDCAIDAPLVMLFLTDEAGLAVHPFNT 187
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+AD S S +E + AV +V + A++++ +QN
Sbjct: 188 IVADARSRCSIVEQFVGIADGAYLI-NAVTRIVTGNEADVQHCRIQNEARNAFH------ 240
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ + S+ + G A++ L+ + E + ++ Q +D
Sbjct: 241 --IAHVDVTQERASRFTSHSFAFGGALSRTQIDTRLQDVDANAELNGLYFADAKQHVDHH 298
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T++ H + TSR +G+ G S+ + GKV VHR A + +LL+ + T
Sbjct: 299 TRIDHDKPHGTSREYYRGVLDGASHGVFNGKVIVHRDAQQTDTHQSNYNLLLSRDAQIDT 358
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H AT ++ +E LFY RGI E A AL++ FVRE L+ + +E
Sbjct: 359 KPQLEIHADDVKCTHGATVGQLDEEPLFYLRSRGIEERVARALLIWAFVRERLEHVGIEA 418
Query: 473 AVEAQK--LIDISLEG 486
K L+ + EG
Sbjct: 419 VRNTLKQMLLARTPEG 434
>gi|254445793|ref|ZP_05059269.1| FeS assembly protein SufD [Verrucomicrobiae bacterium DG1235]
gi|198260101|gb|EDY84409.1| FeS assembly protein SufD [Verrucomicrobiae bacterium DG1235]
Length = 443
Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats.
Identities = 101/440 (22%), Positives = 178/440 (40%), Gaps = 26/440 (5%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W + A+ + ++ P+ R F ++ LDDV L
Sbjct: 26 PAWWKTSKTEAFENFASLPLPT---RRTETWRFANI----------KGLELDDVKFAALP 72
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+ + + V D D EL GVI+ P+ EA+ +H
Sbjct: 73 SISDAASLVDRSNFIETYAGRFVFGD---DQTLKADRLSPELAAKGVIWAPLREAVSKHG 129
Query: 171 DLVKKYLSTV-VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
+++K Y +G +AAL+ A +G+ +Y+PKGV Y G+ F
Sbjct: 130 EILKDYFMKQEADLGSAKFAALHQAFLENGALLYVPKGVEIEDPFVVYNWSINAGSAIFP 189
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
TL+I ++ + V +E + D V + A + + Y+ +QN+ +
Sbjct: 190 HTLVITEDFAKVRLVEANLSATEDAAAFSCGVNHIFAGVGSTVDYTLLQNFNEQTLGFQI 249
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ G S + + G ++G S S+A+++ Q+I
Sbjct: 250 N--------SNIAGKDSNVKTISVNVGCKRYRSETHGQIKGSGSQVNMLSLAVADHDQEI 301
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T H A +T S ++ K + + G + V GA + + +LL+
Sbjct: 302 DQRTLQTHSAPHTYSNLLFKNALVDDARTIFSGLIKVDPGAQQTDAYQTNRNLLLSGTAE 361
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
A+++P +E + H ATTS+I D+ +FY L RGIP E A LIV GF E+L+++
Sbjct: 362 ANSLPGLEIDANDVKCSHGATTSQIEDDEIFYMLARGIPREKAQELIVYGFFEEILEQIS 421
Query: 470 MEFAVE-AQKLIDISLEGSV 488
+ E A+++I + +
Sbjct: 422 CDTVAENARQIIQAKFKKRL 441
>gi|284035108|ref|YP_003385038.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
gi|283814401|gb|ADB36239.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
Length = 441
Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats.
Identities = 88/435 (20%), Positives = 157/435 (36%), Gaps = 37/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A +++ + P+ + ++ LD L
Sbjct: 36 QLRRAALKQFEQLGFPTIRH---EEWKYSNVNSLIKEDFA-----LDATSSLTAEDLAPL 87
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP E IL V + S S V ++EAI P+ V
Sbjct: 88 EIPNLEGNILYFVNGIYHPELSRLVSPSEQ-----------VQITSLAEAIKADPEFVGT 136
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE--KGTGQFERTLI 233
+ + D+ + ALN+A+ +DG V +P + F + R LI
Sbjct: 137 HFAHYADYQDSAFTALNTAMASDGVVVRVPANTTVEQPIILRFITDARVNNITSQPRNLI 196
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + V E + + V E+V +A ++Y V N +
Sbjct: 197 VIGKNAEVMMAESYRTLGEKSSFV-NVVTEIVLDRDARMQYYKVLNETAKAYHIGTTQVH 255
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ S + + +L G+ + Y + + NG Q +D+ T
Sbjct: 256 --------QSDNSHFYSASITLNGHFVRNNLNIVLNGQHAEAFMYGLYMPNGRQHVDNHT 307
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H N+ S + KGI S + GK+ V A + + C ++++ +T
Sbjct: 308 LVDHAMPNSYSNELYKGILDDNSTGVFNGKIFVRPDAQKTNAYQSCKNVVLSPGASMNTK 367
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H TT +++DE LFY RGIP++ A L++ F ++VL ++ ++
Sbjct: 368 PQLEIYADDVKCSHGTTTGQLNDEALFYMRSRGIPKDEARTLLLYAFSQDVLSQIKIQPI 427
Query: 474 VEAQKLIDISLEGSV 488
E LEG V
Sbjct: 428 RE-------YLEGVV 435
>gi|111657217|ref|ZP_01407989.1| hypothetical protein SpneT_02001569 [Streptococcus pneumoniae
TIGR4]
Length = 409
Score = 266 bits (680), Expect = 6e-69, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 173/441 (39%), Gaps = 38/441 (8%)
Query: 47 KKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
EP W+ + R A+ + T++ P +++ + D ++
Sbjct: 1 MHAEPSWLADLRQKAFDKIETLELPVIECVKFHRWNLGD------------GTITENEPS 48
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
+ + L L V T +V EL + GV+F A+
Sbjct: 49 ANVPDFTAL----DHHLKLVQVGTQ-----------TVFEQTPVELAEQGVVFTDFHSAL 93
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
E P+L++++ + V D+ AA ++A F G+ +YIP V + F +
Sbjct: 94 EEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNV 153
Query: 227 QFE-RTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYSTVQNWYPGD 284
F +II + S +SYLE + ++ VE++A A++K++ +
Sbjct: 154 PFNKHIMIIVGKNSKISYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGE-- 211
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ ++++RG G + I W L G S + +A+S+
Sbjct: 212 -----NVTAYISRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSS 265
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G Q T++ + N+ I+ G+ + T+ G + +GA + + L++
Sbjct: 266 GRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLML 325
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ + P + + H A+ ++ E ++Y + RG+ + A L+V GF+ V
Sbjct: 326 SDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSV 385
Query: 465 LQKLPM-EFAVEAQKLIDISL 484
+ ++P+ E E I+ L
Sbjct: 386 IVEIPVKEVRDEMIATIEEKL 406
>gi|227544252|ref|ZP_03974301.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri CF48-3A]
gi|300910225|ref|ZP_07127685.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri SD2112]
gi|86604284|gb|ABD13920.1| putative ABC-type transporter-associated protein [Lactobacillus
reuteri]
gi|227185765|gb|EEI65836.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri CF48-3A]
gi|300892873|gb|EFK86233.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri SD2112]
Length = 429
Score = 266 bits (679), Expect = 7e-69, Method: Composition-based stats.
Identities = 98/452 (21%), Positives = 174/452 (38%), Gaps = 38/452 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
++ I S NEP +++ RL A+ ++ P R + P
Sbjct: 8 KEQIIAASKANNEPQQLIDRRLSAWELMEKLRLPRMQRFDFRTW----------PLIAER 57
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P + D +L++ V +V F + ++L+ GV
Sbjct: 58 PLKWVESDADLVK---------------KPVTDDEVIKVTQFGQTLLHVNLPQKLQDQGV 102
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I I A E+P+L KY T + +N A + A G F+YIPK V +
Sbjct: 103 ILTDIFTAAREYPELFNKYFMTAINPEENLLTAYHLAYLNAGLFLYIPKNVEIEKPIEAE 162
Query: 218 FRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ + L+IAD GS + +++ T EN ++EL+A +N+EI +S+
Sbjct: 163 IIQDSTQDEPLISHILVIADRGSRIKFIQHLTTVGDHEN-AANMMIELMAQENSEIDFSS 221
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ + P + KR G + + W T L G+
Sbjct: 222 LDEFGPH--------THTYFKRRADIGKDAHVEWAVGLMNDGATVGDMDSELLGDGGYAN 273
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA++ Q++ ++ + K+TT I +G+ S + G + GA ++
Sbjct: 274 SKMIAVTTRDQEVGVNNRVTNHGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKAD 333
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
Q L++ + P + + H A+ + + ++Y + RGIP A ++
Sbjct: 334 QQNRVLIMSDQARGDANPILLIDENDVEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMV 393
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL +P A KLI I LE +
Sbjct: 394 IRGFLGAVLSAIP--AADVRNKLITI-LERKL 422
>gi|227511591|ref|ZP_03941640.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus buchneri ATCC 11577]
gi|227085236|gb|EEI20548.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus buchneri ATCC 11577]
Length = 430
Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats.
Identities = 90/444 (20%), Positives = 179/444 (40%), Gaps = 39/444 (8%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
NEP+W+ R A+ + + P + ++ Y + D + Q DV L
Sbjct: 21 NEPEWLTNLRDEAWEQVDKLTLPVFDKVDYHSWPLLDF-------TETEEQPTGDVTSLL 73
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
T + + + ++ ++LK G+I + AI +
Sbjct: 74 DPTENYHFVSVGK--------------------ETIKNDLSDDLKSKGIILTDMKTAIRD 113
Query: 169 HPDLV-KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+ +L+ K V +N A+N+A+ G+F+Y+P V ++ + +
Sbjct: 114 YSELLSKYLFQKAVKYKENRLTAVNAALMNGGTFLYVPDNVDIKEPINLMTVQDSRFKEN 173
Query: 228 F-ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
F TLI+A S+ S L+ + N H V E++A D++ +K+S +
Sbjct: 174 FVNHTLIVAGVNSHFSVLQRVSTIGEQTNPAHVTV-EIIAEDSSYVKFSALDTLAK---- 228
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
Y + +RG ++I WT T L G+ S E ++A+S G
Sbjct: 229 ---NTYAYYNRRG-YLESSARIDWTMGVLNDGHTVADFDSDLMGDGSHTEMQTVALSTGK 284
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q T++ + +++ I+ +G+ S + G + GA ++ + L++
Sbjct: 285 QVQGLDTQVTNYGRHSEGNILQRGVLLDSSTLIFNGVGKIIHGAHGAKAQQENRVLMLSP 344
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
P + + H A+ +I+ + L+Y + RG+ ++ A L+V GF+ VL+
Sbjct: 345 KAHGDANPILLIDENDVVAGHAASVGQINKKQLYYLMSRGLSKKVAKRLVVRGFLGVVLR 404
Query: 467 KLPMEFAVE-AQKLIDISLEGSVG 489
+P+ E ++++ L G
Sbjct: 405 DIPVADVREQMVEMMERKLSNEQG 428
>gi|313638921|gb|EFS03956.1| FeS assembly protein SufB [Listeria seeligeri FSL S4-171]
Length = 234
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 107/240 (44%), Positives = 145/240 (60%), Gaps = 8/240 (3%)
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
P N LH+AVVE++ A +Y+T+QNW +YN VTKR C + +
Sbjct: 3 PVYTTNSLHSAVVEIIVKPGAYCRYTTIQNWA-------NNVYNLVTKRTFC-EENATME 54
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
W GS +T KYP+ LRGE + G SIAI+ Q+ D+G KM+H A NT+S IVSK
Sbjct: 55 WIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYAPNTSSTIVSK 114
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
IS N TYRG V R A +R+ +CD+L++ N + TIPY E NS+ +LEHEA
Sbjct: 115 SISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEA 174
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SK+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 175 KVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 234
>gi|89900648|ref|YP_523119.1| FeS assembly protein SufD [Rhodoferax ferrireducens T118]
gi|89345385|gb|ABD69588.1| Iron-regulated ABC transporter permease protein SufD [Rhodoferax
ferrireducens T118]
Length = 442
Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats.
Identities = 79/420 (18%), Positives = 143/420 (34%), Gaps = 29/420 (6%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ R A R + PS A F L +A + ++
Sbjct: 33 PKWLTTLRAQALERVGALTLPS---THDEAWRFTPLATFARQSFHPLRTPTALLPGDIK- 88
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+ V T V VD +G+ ++ +
Sbjct: 89 -----------HLHIEEVTTRLVFVDG-----VHAPQLSSLKPDAGLAVGTLASMLARQA 132
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
++ +L + D +AALN+A D + + +P+ + + + R
Sbjct: 133 SSIEPHLGQHLAFHDALFAALNTAFLQDAAVLVVPRETTLAAPVHVLYISTQPDVASHPR 192
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
L++A GS + +E A AV E+ NA++ + +Q
Sbjct: 193 LLLVAGAGSKATLIEDYVAL-HPGTYFTNAVAEVALGANAQVSHVRIQRESQQAFHMAS- 250
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
G S+ + G I+ L + + +A+ G Q D
Sbjct: 251 -------CAVSLGAASRYHSASITLGGQISRLDLKVLQSADAAECALDGLALIGGQQLAD 303
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ T + H + SR + K I G ++ + G+V V GA + + +LL+
Sbjct: 304 THTFIDHAKPHGVSRQLHKCIVGGAAHAVFNGQVMVRPGAQKTDSAQSSRNLLLSGKAQV 363
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT ++ + +FY RG+ E A L+ F EV+ ++P+
Sbjct: 364 DTQPQLEIFADDVKCTHGATVGQLDSDEVFYLQSRGLSEAVARNLLTYAFGAEVINRIPV 423
>gi|108760528|ref|YP_629415.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
gi|108464408|gb|ABF89593.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
Length = 446
Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/441 (20%), Positives = 162/441 (36%), Gaps = 30/441 (6%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ R A + P+ R A + L A I D L
Sbjct: 25 PQWLKRLRADALAHFERQGLPT---TRDEAWKYSRLGAIAEGTFIPRTDVSRD-TAHLSA 80
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
E+LG+P + G +++ A G+ P+ +A+ E
Sbjct: 81 VVERLGLPGPRLVFVDGRLAPELSSVAGL--------------PRGLTLKPLRDAVREDG 126
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR-INEKGTGQFE 229
+L++ L ++ + ALN+A+ +G + + G + + F +
Sbjct: 127 ELLESVLGQRALANEHAFTALNAALLEEGVLLRLAPGALSEVPVQVVFLTRGDAPVLSSP 186
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDEN--QLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R L++A E S + +E + + AV E+ DNA + + +Q
Sbjct: 187 RILVVAGESSEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEADAALH- 245
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
V +G S+ + G A+ GE + + G Q
Sbjct: 246 -------VGALHARQGRDSRFASHAFAFGGAMARNEVHAAFAGEGGDATLNGLYVGQGAQ 298
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D+ T + H TSR + KG+ G S T+ G + V + A + + Q +LL+ +
Sbjct: 299 HLDNRTALDHAVPRCTSRELYKGVLDGHSRGTFHGLIRVRQDAQRTDSRQQNRNLLLSES 358
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
A P +E H A ++ + LFY RG+P+ A L+ F REV++
Sbjct: 359 AQADARPQLEIFADDVKCAHGAAVGRLDAQALFYLRSRGVPQAEAERLLTYAFAREVVEA 418
Query: 468 LPM-EFAVEAQKLIDISLEGS 487
+P + L+ + L G+
Sbjct: 419 VPAGPVRANIEALLALKLPGA 439
>gi|227508612|ref|ZP_03938661.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191944|gb|EEI72011.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 430
Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/444 (20%), Positives = 180/444 (40%), Gaps = 39/444 (8%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
NEP+W+ R A+++ + P + ++ Y + D + Q DV L
Sbjct: 21 NEPEWLTNLRDEAWKQVDKLTLPVFDKVDYHSWPLLDF-------TETEEQPTGDVTSLL 73
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
T + + ++ ++ ++LK G+I + AI +
Sbjct: 74 DPTENYHFVSVGKK--------------------TIKNDLSDDLKSKGIILTDMKTAIRD 113
Query: 169 HPD-LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
H + L K V +N A+N+A+ G+F+Y+P V ++ + +
Sbjct: 114 HSETLSKYLFQKAVKYKENRLTAVNAALMNGGTFLYVPDNVDIKDPINLMAVQDSRVKEN 173
Query: 228 F-ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
F TLI+A S+ S L+ + N H V E++A D++ +K+S +
Sbjct: 174 FVNHTLIVAGANSHFSVLQRVSTIGEQTNPAHVTV-EIIAEDSSYVKFSALDTLAK---- 228
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
Y + +RG ++I WT T L G+ S E ++A+S G
Sbjct: 229 ---NTYAYYNRRG-YLESSARIDWTMGVLNDGHTVADFDSDLMGDGSHTEMQTVALSTGK 284
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q T++ + +++ I+ +G+ S + G + GA ++ + L++
Sbjct: 285 QVQGLDTQVTNYGRHSEGNILQRGVLLDSSTLIFNGVGKIIHGAHGAKAQQENRVLMLSP 344
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
P + + H A+ +I+ + L+Y + RG+ ++ A L+V GF+ VL+
Sbjct: 345 KAHGDANPILLIDENDVIAGHAASVGQINKKQLYYLMSRGLSKKVAKRLVVRGFLGVVLR 404
Query: 467 KLPMEFAVE-AQKLIDISLEGSVG 489
+P+ E ++++ L G
Sbjct: 405 DIPVADVREQMVEMMERKLSNEQG 428
>gi|305665682|ref|YP_003861969.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
gi|88710440|gb|EAR02672.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
Length = 438
Score = 263 bits (673), Expect = 4e-68, Method: Composition-based stats.
Identities = 95/439 (21%), Positives = 164/439 (37%), Gaps = 34/439 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + PS + A + L + P+ ++ ++ + ++ +
Sbjct: 26 DIRSEAIKNFEEKGFPS---KKDEAWKYTSLKGLQKIDFSIFPKEVNALEYKDVKKFFLH 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI-CEHPDLVK 174
I + + G + ++F E GV +S A+ V
Sbjct: 83 EIESYKIVFIDG----------------IYSSFLSETTHDGVDICLMSAALTKPMYKQVI 126
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTGQFERTL 232
+ D LN+A +G+++YIPK + + NE R+L
Sbjct: 127 DVYFNKIASKDETLTTLNTAFSREGAYIYIPKNKMPKKPIEILYFSTGNEASLMLQPRSL 186
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
++ +E + V +E + L AV E+ A +N+ I Y VQN S
Sbjct: 187 VVVEENAEVQIIERHQSLT-SNEVLTNAVTEIFAAENSIIDYYKVQNDSKTASLIDNTYI 245
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N + +S + G +T + GE + I Q +D
Sbjct: 246 N--------QKSKSVVKVHTFSFGGKLTRNNLNFYQNGEHIDSTMKGVTILGYKQHVDHH 297
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H+ N S KGI S + GK+ V + A + F Q +++LI + +T
Sbjct: 298 TLVHHIEPNCESHQDYKGIYGENSTGVFNGKIIVDKIAQKTNAFQQNNNILISDKATINT 357
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK--LPM 470
P +E H T ++ ++ LFY RGIP++ A AL++ F VL +P
Sbjct: 358 KPQLEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEARALLMYAFANNVLASVLIP- 416
Query: 471 EFAVEAQKLIDISLEGSVG 489
E KLI L S+G
Sbjct: 417 ELKSRINKLIAEKLGVSLG 435
>gi|77165946|ref|YP_344471.1| FeS assembly protein SufD [Nitrosococcus oceani ATCC 19707]
gi|254433093|ref|ZP_05046601.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
gi|76884260|gb|ABA58941.1| Iron-regulated ABC transporter permease protein SufD [Nitrosococcus
oceani ATCC 19707]
gi|207089426|gb|EDZ66697.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
Length = 446
Score = 263 bits (672), Expect = 5e-68, Method: Composition-based stats.
Identities = 86/449 (19%), Positives = 166/449 (36%), Gaps = 40/449 (8%)
Query: 34 KGLNED---IIRFISAKKNEPD-------WMLEWRLLAYRRWLTMKDPSWARIRYPAIDF 83
KG++E + S + EPD W+ E R A R++++ P ++ +
Sbjct: 2 KGISEAWQPYVD--SYARLEPDLAGANLPWLRELRQQALARFISLGFP---GLKNEDWKY 56
Query: 84 DDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
+ A S V E + Y P + G ++ + +
Sbjct: 57 TRVRALAETAFNSAVSSSVAVSLEQCQRYFLAETPCFRLVFVDGCFAPGLSEIEDLPAGT 116
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
VV K+ G + ++ L++ + + ALN+A DG+++Y
Sbjct: 117 VVGNLAGCFKQQG--------------ESLRGVLASYADYQNQPFTALNTAFMADGAYLY 162
Query: 204 IPKGVRCPMELSTYFRINEKGTG--QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+P + F + R LI+ + S ++ +E V
Sbjct: 163 LPPRTVLAKPVHLIFLTTGRSEAVVTHSRNLIVLEPESELTVIEHYAGLNDAV-YFTNTV 221
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
E+ A A +++ +Q + + ++ L G +
Sbjct: 222 TEIAAGKGANVEHIKLQEESAKSFH--------IATIQVQQEQDAQFLSRNLALGGRLAR 273
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
+ +L GE + + + +G + +D+ T++ H +TTS+ KGI G S +
Sbjct: 274 NDINSVLAGEGAGCILEGLYVLDGVRHVDNHTRVDHQQPHTTSQEFYKGILDGKSRAVFN 333
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
GKV VH A + +LL+ T P +E H AT ++ + +FY
Sbjct: 334 GKVIVHPHAQKADARQANRNLLLSEGAEVDTKPELEIYADDVKCAHGATVGQLDKDQIFY 393
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPM 470
RG+ E+AA L+ FV E+++++ +
Sbjct: 394 LRSRGMEEDAARQLLTYAFVEEIVRRIKL 422
>gi|116695455|ref|YP_841031.1| iron sulfur cluster assembly protein SufD [Ralstonia eutropha H16]
gi|113529954|emb|CAJ96301.1| iron sulfur cluster assembly protein (SufD),ABC-type transporter
involved in Fe-S cluster assembly,Fe-S family [Ralstonia
eutropha H16]
Length = 443
Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats.
Identities = 95/434 (21%), Positives = 165/434 (38%), Gaps = 27/434 (6%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG-PQSLDDVDPELLRT 111
W+ R A + P+ +R+ + + + V PQ+ D DP +
Sbjct: 27 WLAHARRQALDHFAQAGFPT---LRHEDWKYTSVAALERSRFAVALPQAGDSPDPAVAAQ 83
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E L LAG Q S + T +G+ ++ + PD
Sbjct: 84 IEAL--------ALAGAQLMVFVNGTHQPQWSRIGTLP-----AGIELASLAATLERAPD 130
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
++ L + +AALN A TDG+++ + G + F R
Sbjct: 131 CLEALLLCRTSDYPSGFAALNMAFMTDGAYIRVAAGTVPEQPIHLLFLATAAELATHARN 190
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L++A GS V +E + ++VA +A++++ +Q G
Sbjct: 191 LVVAQAGSQVCIVEHHAGL-DGLAYCTNTITDIVAERDAQVEHHKLQQESLKAFHIAG-- 247
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
N ++G S G A+ + L E + + ++ G Q +D
Sbjct: 248 VNLDQRQGSRCASSSF------ALGGALARVDINVGLNAEHTECSLDGLYMTAGRQHVDH 301
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T++ H + ++ SR + KG+ AG S + GKV VH A HS +LL+ +
Sbjct: 302 HTRVDHASPHSKSRELYKGVLAGASRAVFNGKVVVHADAQHSDAHQSNRNLLLSDQAEVD 361
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL-PM 470
T P +E H AT ++ E ++Y RG+ + AA AL+ F EV+++L P
Sbjct: 362 TKPQLEIYADDVKCGHGATVGQLDAEQIYYLRSRGMDDAAARALLTFAFAEEVVRRLGPA 421
Query: 471 EFAVEAQKLIDISL 484
+ L+ L
Sbjct: 422 PLRTRLETLLRGKL 435
>gi|300113348|ref|YP_003759923.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
gi|299539285|gb|ADJ27602.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
Length = 446
Score = 263 bits (671), Expect = 7e-68, Method: Composition-based stats.
Identities = 84/449 (18%), Positives = 162/449 (36%), Gaps = 40/449 (8%)
Query: 34 KGLNED---IIRFISAKKNEPD-------WMLEWRLLAYRRWLTMKDPSWARIRYPAIDF 83
KG++E + S + EPD W+ E R A R++++ P +
Sbjct: 2 KGISEAWQPYVD--SYARLEPDLAGSNLPWLRELRQQALARFISLGFPGPKHED---WKY 56
Query: 84 DDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
+ A S V E + Y P + G ++ A
Sbjct: 57 TRVRTLAETAFTSAVSSSIAVSLEQCQRYFLAETPCFRLVFVDGGFAPGLSEVADL---- 112
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
+G + ++ + + ++ L++ + + ALN+A DG+++Y
Sbjct: 113 ----------PAGAVVGNLASCFKQQAESLRGVLASYADYQNQPFTALNTAFMADGAYLY 162
Query: 204 IPKGVRCPMELSTYFRINEKGTG--QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+P + F + R LI+ + S ++ +E V
Sbjct: 163 LPPRTVLTKPVHLIFLTTGRSKAVVTHPRNLIVLEPESELTVIEHHAGLNDAV-YFTNTV 221
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
E+V A +++ +Q + + ++ L G +
Sbjct: 222 TEIVVGKGASVEHIKLQEESAKSFH--------IATVQVQQEQDAQFLSRNLALGGRLAR 273
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
+ +L GE + + +G + +D+ T++ H +TTS+ KGI G S +
Sbjct: 274 NDINSVLAGEGAGCILEGLYALDGVRHVDNHTRVDHQQPHTTSQEFYKGILEGKSRAVFN 333
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
GKV VH A + +LL+ T P +E H AT ++ + +FY
Sbjct: 334 GKVIVHPHAQKADACQANRNLLLSEGAEVDTKPELEIYADDVKCAHGATVGQLDKDQIFY 393
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPM 470
RG+ E+AA L+ FV E+ +++ +
Sbjct: 394 LRSRGMKEDAARQLLTYAFVEEIARRIKL 422
>gi|292655024|ref|YP_003534921.1| FeS assembly protein SufD [Haloferax volcanii DS2]
gi|291371934|gb|ADE04161.1| FeS assembly protein SufD [Haloferax volcanii DS2]
Length = 402
Score = 262 bits (670), Expect = 9e-68, Method: Composition-based stats.
Identities = 110/459 (23%), Positives = 204/459 (44%), Gaps = 62/459 (13%)
Query: 29 VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLY 87
+ P L+ + +R IS ++EP+W+LE RL A ++ P + + + L
Sbjct: 2 SAQLPANLSAETVREISDARDEPEWLLEARLEALEALDALELPDVIQTPGRRWTNLEAL- 60
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
+E L P+ + + T
Sbjct: 61 -----------------------DFESLVDPLNQAD----------------------ET 75
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
+E + GV+ +P +EA+ E+ DL+++ +VV N+ AL++A+FT G+F+Y+P+G
Sbjct: 76 TRESPE--GVVVLPFTEALSEYGDLIEERFGSVVAPDTNYLTALSAALFTTGTFIYVPEG 133
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN-QLHAAVVELVA 266
V R F TL++ +E S V+ LE + ++ + + +VE+ A
Sbjct: 134 VDAED---VKIRAEMNSRSLFSHTLVVTEESSSVTILEAIESGDSVDDARYFSNLVEIDA 190
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
+N+ ++Y ++QN Y + KR D S ++W + GS +T
Sbjct: 191 GENSYVQYGSLQNLDEE-------TYTYSLKRADA-DTYSTVNWIEGNLGSRLTRSDVET 242
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L GE S + + Q +D ++ H A+NTT+ +V++G+ + + Y G V
Sbjct: 243 ELNGEASETKIVGAFFGHDDQHLDVNARVWHKAENTTADLVTRGVLDDEARSVYEGVQDV 302
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
R A + ++ + ++L++ + A P + N H A+ ++ E LFY + R
Sbjct: 303 GRDAWSTNSYQRENTLMLSDQSEADASPKLIINNHDTEASHAASVGQVDAEDLFYMVSRS 362
Query: 447 IPEEAAIALIVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
+PEE A ++V GF VL+++ EF + ++LI L
Sbjct: 363 VPEEQARNMLVEGFFVPVLEEIEVDEFRDDLEELIAARL 401
>gi|229823014|ref|ZP_04449084.1| hypothetical protein GCWU000282_00307 [Catonella morbi ATCC 51271]
gi|229787827|gb|EEP23941.1| hypothetical protein GCWU000282_00307 [Catonella morbi ATCC 51271]
Length = 435
Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/438 (21%), Positives = 181/438 (41%), Gaps = 31/438 (7%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
PDW + A+ W ++ P R++Y + +V PQ+L++
Sbjct: 20 PDWFRAIQNQAHSVWQDLQLPVIERVKYHRWPL-------LSQEVVAPQTLEE------P 66
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
L + EQ+ L+G + ++V + ++L GVI + +A+ ++P
Sbjct: 67 LLYGLDAALAEQDHLSGQ-------IVHVGNHTLVESLDQDLVDQGVIVTDLFQALADYP 119
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE- 229
DLVK++L +V+ ++ A ++A G F+Y+P+ V + L + + F
Sbjct: 120 DLVKEHLFSVIGAHEDQIEAYHTAFMNGGLFIYVPRNVAVTLPLEALLVQDSRYGQAFNK 179
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
LI+ ++G+ + Y+E N V E+V A+IKYS V
Sbjct: 180 HVLIVLEQGASLDYVERLETYGDKPNSATYFV-EVVVKAGAQIKYSAVDTLGAKS----- 233
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ KR +KI W E L G+ S + + IS G Q
Sbjct: 234 ---HAYIKRYAQTARDAKIDWAIGELNDGNVILDLDTYLNGDGSESQVQIVGISTGKQIQ 290
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+K+++ ++ I+ G+ + T+ G + + A + + L++
Sbjct: 291 GIDSKVVNRGNHSVGNILQHGVILDRATLTFNGIGLIEKYAKGADAQQESRVLMLSEKAR 350
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P + + H A+ ++ +E L+Y + RG+ EAA L+V GF+ V+ ++P
Sbjct: 351 GDANPILLIEEFEVTAGHAASVGQVDEEQLYYLMSRGLSREAAEYLVVRGFLGPVIVQMP 410
Query: 470 M-EFAVEAQKLIDISLEG 486
E + ++ID L G
Sbjct: 411 SAEIRRQLVEIIDRKLSG 428
>gi|292490818|ref|YP_003526257.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
gi|291579413|gb|ADE13870.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
Length = 447
Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 154/430 (35%), Gaps = 31/430 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E R A ++ +M P + + A S V + + Y
Sbjct: 29 WLRELRQQALGQFQSMGFPGPKNED---WKYTRVRALAETAFTPVVSSPVAVSLDECQGY 85
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+P + G ++ +VV + + LK+ G +
Sbjct: 86 FLPDMPCFRLVFVDGRFVPGLSEIEELPQGAVVGSLADGLKQEG--------------EG 131
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG--QFER 230
++ + + + ALN+A DG+++Y+P + F + R
Sbjct: 132 LRSVFAGYADHHNQPFTALNTAFMADGAYLYLPAKAVLTKPVHLLFITTGRSDAVVTHPR 191
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
L+I + S ++ +E AV E+V A++++ +Q
Sbjct: 192 NLMILEPESELTVIEHYAGLNDGV-YFTNAVTEVVMGRGAKVEHIKLQEEAAKSFH---- 246
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ + ++ L G + + +L GE + + NG + +D
Sbjct: 247 ----IATVQVQQEQDAQFLSRNLALGGRLVRNDINSVLGGEGAGCVLEGLYALNGERHVD 302
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ T++ H +TTS KGI G S + GKV VH A +LL+
Sbjct: 303 NHTRIDHKQPHTTSEEYYKGILGGKSRAVFNGKVIVHPHAQKVDARQANRNLLLSEGTEV 362
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK--- 467
T P +E H AT ++ + +FY RG+ E+ A L+ + F E+++
Sbjct: 363 DTKPELEIYADDVKCAHGATIGQLDKDQVFYLRSRGMEEKDARQLLTHAFAEEIVKHIEL 422
Query: 468 LPMEFAVEAQ 477
LP+ VE Q
Sbjct: 423 LPVRNRVEHQ 432
>gi|259501892|ref|ZP_05744794.1| FeS assembly protein SufD [Lactobacillus antri DSM 16041]
gi|259170069|gb|EEW54564.1| FeS assembly protein SufD [Lactobacillus antri DSM 16041]
Length = 428
Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/445 (21%), Positives = 169/445 (37%), Gaps = 39/445 (8%)
Query: 45 SAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDV 104
S + +EP +LE RL A + P R ++ P P
Sbjct: 15 SQQNDEPASLLERRLAARDLMARLHLPRMQRFKFQDW----------PLVADQPLQWVAS 64
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
DP+L A +V +V E L+ +GV+ I
Sbjct: 65 DPKLE----------------AIAPDDEVIRVTQVGQTTVQIHIPERLRAAGVVLTDIFT 108
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEK 223
A ++P+L +KY + + +N A + A G F+Y+PK V + + N +
Sbjct: 109 AARQYPELFEKYFMSAIKADENLLTAYHVAYLNAGLFLYVPKNVEIEKPIEAELVQDNTQ 168
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
L++AD GS V +++ T N ++EL+A DN+EI +S++
Sbjct: 169 DQPLLSHILVVADRGSKVKFIQHLTTVGDQAN-PANMMIELIARDNSEIDFSSLDELGAQ 227
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
+ KR G + + W T L GE IA++
Sbjct: 228 --------THTYFKRRADIGRDAHVEWAVGLMNDGDTVGDMDSELLGEGGYANSKMIAVT 279
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q++ ++ + K+TT I +G+ S + G + GA ++ Q L+
Sbjct: 280 TRQQEVGVNNRVTNRGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKADQQNRVLI 339
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ + P + + H A+ + ++Y + RGIP + A +++ GF+
Sbjct: 340 MSDQARGDANPILLIDENDVEAGHAASVGPVDPHQMYYLMSRGIPRKQAERMVIRGFLGA 399
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSV 488
VL +P A KL+DI LE +
Sbjct: 400 VLSAIP--AADVRNKLVDI-LERKL 421
>gi|110667665|ref|YP_657476.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein II [Haloquadratum walsbyi DSM 16790]
gi|109625412|emb|CAJ51836.1| ABC-type transport system involved in Fe-S cluster assembly,
permease protein II [Haloquadratum walsbyi DSM 16790]
Length = 404
Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 105/455 (23%), Positives = 195/455 (42%), Gaps = 64/455 (14%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLYYYAAPKS 94
L+ D +R IS++++EP+W+L+ RL A ++ P + D + L
Sbjct: 9 LSADTVREISSRRDEPEWLLQTRLEALESLESLDLPDVIKTPGRRWTDLESL-------- 60
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+E L P+ + + + V
Sbjct: 61 ----------------DFETLVDPLNQSDETSRVTAE----------------------- 81
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV +P +EA+ H D+V+ + V +N+ AL++A+FT G+ VY+P+GV
Sbjct: 82 -GVKVLPFAEAVDTHSDVVESAFGSTVAFDENYLTALSTALFTTGTVVYVPEGVDAED-- 138
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA---PQRDENQLHAAVVELVALDNAE 271
R F TL+I++ S V+ LE +++ + +VE+ A +N+
Sbjct: 139 -VKVRAEMNSRSLFSHTLVISEPSSSVTILESIEPGSASVDVDSRYFSNLVEIAAGENSY 197
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
++Y ++Q Y++ KR D ++W + GS +T L G+
Sbjct: 198 VQYGSLQTLE-------DNTYSYTLKRADVS-TYGTVNWIEGNLGSRLTRSDVESNLNGD 249
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
S + + Q D ++ H+A++TT+ +V++G+ + + Y G V R A
Sbjct: 250 SSESQIVGAFFGHEDQHFDVNARVWHMAEHTTADLVTRGVLDDEARSVYEGVQDVGRDAW 309
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ ++ + ++L++ + A P + N H AT ++++E LFY R I
Sbjct: 310 STSSYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQVNEEDLFYMTSRAIDPGV 369
Query: 452 AIALIVNGFVREVLQKLP-MEFAVEAQKLIDISLE 485
A ++V GF VL+++ EF + Q+LI LE
Sbjct: 370 ARDMLVEGFFVPVLEEIAVDEFRDDLQQLISDRLE 404
>gi|30249419|ref|NP_841489.1| hypothetical protein NE1448 [Nitrosomonas europaea ATCC 19718]
gi|30138782|emb|CAD85359.1| Uncharacterized protein family UPF0051 [Nitrosomonas europaea ATCC
19718]
Length = 435
Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats.
Identities = 92/416 (22%), Positives = 162/416 (38%), Gaps = 31/416 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A R +++ P+ IR F D+ ++ +S+ P++ P
Sbjct: 30 LDQLREDALDRIESLRLPT---IRDEEWRFTDI---SSLRSMPFPRASAAPLP------- 76
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG-VIFMPISEAICEHPDL 172
G+ + L V VD + S L G + +SE I +
Sbjct: 77 --GLDKQAGTFLDETACRLVFVDGQYMSGL------SSLADDGSITVCSLSELIGTRASI 128
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
++Y + +N + ALN+A+ DG + IP GV + + + + K + R L
Sbjct: 129 AERYFGQLADFQENVFVALNTALMHDGVCIVIPAGVSVKVPVHILYVTSRKDVAVYPRCL 188
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+IA+ G+ V+ +E + L AV E+ D+A + + VQ G
Sbjct: 189 LIAEPGANVTVVEEY-VTLYEGASLTNAVTEMYIRDSACVNHIRVQRESSQAFHIANG-- 245
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ L G+ I+ +L G + E +A+ G Q D+
Sbjct: 246 ------SVLVAQSAHYDSVSLALGARISRFDQKIILAGGNAECEVDGLALIAGRQLADTH 299
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + SR + K I ++ + GK+ V A + +LL+ + T
Sbjct: 300 TFIDHANPHCRSRQLHKCIVDESAHGVFSGKIMVRPHAQQTDARQLNRNLLLSDKARMDT 359
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H AT ++ +E LFY RG+ E AA L+ F EV+ ++
Sbjct: 360 KPQLEIFADDVKCAHGATVGQLDNESLFYLRSRGLTEVAARNLLTYAFGGEVINRV 415
>gi|319953155|ref|YP_004164422.1| iron-regulated abc transporter permease protein sufd [Cellulophaga
algicola DSM 14237]
gi|319421815|gb|ADV48924.1| Iron-regulated ABC transporter permease protein SufD [Cellulophaga
algicola DSM 14237]
Length = 438
Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/439 (21%), Positives = 163/439 (37%), Gaps = 34/439 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A + + T PS + A + L + P+ ++ ++ ++ Y
Sbjct: 26 EVRSEAMKNFETKGFPS---KKDEAWKYTSLNGLQKIDFSIFPKEVNALEYREVKKYFIN 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE-HPDLVK 174
I + + G+ +S + E GV +S A+ + +
Sbjct: 83 EIDTYKIVFIDGIFSSNL----------------SETTHDGVDICLMSSALNKPMYKQII 126
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTGQFERTL 232
+ D LN+A +G+++YIPK + NE R L
Sbjct: 127 DVYFNKIASKDESLTTLNTAFSKEGAYIYIPKNKMPKKPIEILHFATGNEASLMLQPRNL 186
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II +E + V +E + L V E+ A +A + Y VQN S
Sbjct: 187 IIVEEHAEVQIIERHQSLT-SNEVLTNCVTEIFAAKSAIVDYYKVQNDDANASLIDNT-- 243
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ +S + G +T + GE + I Q +D
Sbjct: 244 ------YIDQKDKSDVKVHTFSFGGKLTRNNLNFYQNGEYIDSTMKGVTILGDKQHVDHH 297
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H+ N S KGI S + GK+ V + A + F Q +++LI + +T
Sbjct: 298 TLVHHIEPNCESHQDYKGIYNDSSTGVFNGKIIVEKLAQKTNAFQQNNNILISDKASINT 357
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLPM 470
P +E H T ++ ++ LFY RGIP++ A AL++ F VL+ ++P
Sbjct: 358 KPQLEIFADDVKCSHGCTIGQLDEDALFYLQSRGIPKKEASALLMYAFANNVLESVRIP- 416
Query: 471 EFAVEAQKLIDISLEGSVG 489
E + KLI L ++G
Sbjct: 417 ELKIRINKLIANKLGVNLG 435
>gi|323256694|gb|EGA40423.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
Length = 300
Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats.
Identities = 160/309 (51%), Positives = 212/309 (68%), Gaps = 24/309 (7%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HPDLV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + T
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKT 232
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+
Sbjct: 233 GQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDN 292
Query: 286 QGKGGIYNF 294
GGI NF
Sbjct: 293 N-TGGILNF 300
>gi|148544122|ref|YP_001271492.1| FeS assembly protein SufD [Lactobacillus reuteri DSM 20016]
gi|227364549|ref|ZP_03848610.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri MM2-3]
gi|325682336|ref|ZP_08161853.1| FeS assembly protein SufD [Lactobacillus reuteri MM4-1A]
gi|148531156|gb|ABQ83155.1| Iron-regulated ABC transporter permease protein SufD [Lactobacillus
reuteri DSM 20016]
gi|227070386|gb|EEI08748.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus reuteri MM2-3]
gi|324978175|gb|EGC15125.1| FeS assembly protein SufD [Lactobacillus reuteri MM4-1A]
Length = 429
Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/452 (21%), Positives = 171/452 (37%), Gaps = 38/452 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
++ I S NEP ++ RL A ++ P R + P
Sbjct: 8 KEQIIAASKANNEPQQLINRRLSARELMEKLRLPRMQRFDFRTW----------PLIAER 57
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P + D +L+ V +V F + ++L+ GV
Sbjct: 58 PLKWVESDADLVE---------------KPVTDDEVIKVTQFGQTLLHVNLPQKLQDQGV 102
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I I A E+P+L KY T + +N A + A G F+YIPK + +
Sbjct: 103 ILTDIFTAAREYPELFNKYFMTAINPEENLLTAYHLAYLNAGLFLYIPKNIEIEKPIEAE 162
Query: 218 FRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ + L+IAD GS + +++ T EN ++EL+A +N+EI +S+
Sbjct: 163 IIQDSTQDEPLISHILVIADRGSRIKFIQHLTTVGDHEN-AANMMIELMAQENSEIDFSS 221
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ + P + KR G + + W T L G+
Sbjct: 222 LDEFGPH--------THTYFKRRADIGKDAHVEWAVGLMNDGATVGDMDSELLGDGGYAN 273
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA++ Q++ ++ + K+TT I +G+ S + G + GA ++
Sbjct: 274 SKMIAVTTRDQEVGVNNRVTNHGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKAD 333
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
Q L++ + P + + H A+ + + ++Y + RGIP A ++
Sbjct: 334 QQNRVLIMSDQARGDANPILLIDENDVEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMV 393
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL +P A KLI I LE +
Sbjct: 394 IRGFLGAVLSAIP--AADVRNKLITI-LERKL 422
>gi|184153493|ref|YP_001841834.1| hypothetical protein LAR_0838 [Lactobacillus reuteri JCM 1112]
gi|183224837|dbj|BAG25354.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
Length = 430
Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/452 (21%), Positives = 171/452 (37%), Gaps = 38/452 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
++ I S NEP ++ RL A ++ P R + P
Sbjct: 9 KEQIIAASKANNEPQQLINRRLSARELMEKLRLPRMQRFDFRTW----------PLIAER 58
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P + D +L+ V +V F + ++L+ GV
Sbjct: 59 PLKWVESDADLVE---------------KPVTDDEVIKVTQFGQTLLHVNLPQKLQDQGV 103
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I I A E+P+L KY T + +N A + A G F+YIPK + +
Sbjct: 104 ILTDIFTAAREYPELFNKYFMTAINPEENLLTAYHLAYLNAGLFLYIPKNIEIEKPIEAE 163
Query: 218 FRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ + L+IAD GS + +++ T EN ++EL+A +N+EI +S+
Sbjct: 164 IIQDSTQDEPLISHILVIADRGSRIKFIQHLTTVGDHEN-AANMMIELMAQENSEIDFSS 222
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ + P + KR G + + W T L G+
Sbjct: 223 LDEFGPH--------THTYFKRRADIGKDAHVEWAVGLMNDGATVGDMDSELLGDGGYAN 274
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA++ Q++ ++ + K+TT I +G+ S + G + GA ++
Sbjct: 275 SKMIAVTTRDQEVGVNNRVTNHGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKAD 334
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
Q L++ + P + + H A+ + + ++Y + RGIP A ++
Sbjct: 335 QQNRVLIMSDQARGDANPILLIDENDVEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMV 394
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL +P A KLI I LE +
Sbjct: 395 IRGFLGAVLSAIP--AADVRNKLITI-LERKL 423
>gi|288961956|ref|YP_003452266.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
gi|288914236|dbj|BAI75722.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
Length = 454
Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats.
Identities = 90/427 (21%), Positives = 156/427 (36%), Gaps = 33/427 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E R R+ + P+ + + DL + + S+D LL T
Sbjct: 45 WLTELRAAGRERFAAVGLPTIKNESWRYTNLRDLAKTSFLSAAPAAASID-----LLPTL 99
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
G P L V A + + GV + ++ A+ H DL
Sbjct: 100 RAEGGP-----RLVFVDGRFRADLSSVGGLP-----------PGVELLSLAAALTSHGDL 143
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG---TGQFE 229
+ ++ + D ALNSA DG +++P GV+ + F T
Sbjct: 144 LADHIGRLAVADDRPLVALNSAYLADGPVLHVPAGVQVERPVELVFVSVGSEAQATACHP 203
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R+L++A+ GS + +E L V E+ + A + + Q G
Sbjct: 204 RSLLVAEAGSKAAVVEHHVGRG-AGTTLANHVTEVFVGEGATLHHYKSQCEGGGAIHLSH 262
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
L TG+ ++ L G + + G Q
Sbjct: 263 --------IAATVAAGGCYDNFILTTGAKLSRNEVVSRLDGTDARTHVSGGYLVRGTQHA 314
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D+ T ++H N TSR V KG+ + ++GK++V GA + + +LL+ +
Sbjct: 315 DTTTLIVHAQPNGTSREVYKGVIDDSARAVFQGKITVCPGAQKTDGYQLNRALLLSDGAE 374
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ P +E H T ++ D+ LFY RGI + A L++ F+ E L+++
Sbjct: 375 IDSKPELEIHADDVKCSHGCTAGELDDDALFYLRARGIDRDTAQGLLIGAFLSESLEEIA 434
Query: 470 MEFAVEA 476
E +A
Sbjct: 435 EESIRDA 441
>gi|284164782|ref|YP_003403061.1| SufBD protein [Haloterrigena turkmenica DSM 5511]
gi|284014437|gb|ADB60388.1| SufBD protein [Haloterrigena turkmenica DSM 5511]
Length = 406
Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats.
Identities = 106/450 (23%), Positives = 196/450 (43%), Gaps = 59/450 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L E+ +R IS +EP+W+LE RL A ++ P +
Sbjct: 11 LTEEQVREISGDLDEPEWLLETRLEALEALDSLDMPDVIKT------------------- 51
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ ++ +E L P+ E K+++
Sbjct: 52 -PGREWTNLHE---LDFESLVDPLNAAEN------------------------KDQVGPD 83
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
+ ++A+ EH +L+K++ ++V +N+ AL++A+F+ G+ +Y+P+GV
Sbjct: 84 EADVLSWADAVQEHEELLKEHFGSIVDPQENYLTALSTALFSTGTVIYVPEGVDAED--- 140
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
R + F TL++ +E S V+ LE + + E Q ++ VVE+ A +N+ ++Y
Sbjct: 141 VAIRTEQNSRSLFNYTLVVTEESSSVTILERQSTGEEAEEQYYSGVVEVAAGENSYVQYG 200
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++QN YNF KRG + I W + G+ +T S LRG+ S
Sbjct: 201 SLQNLSEEA-------YNFTVKRGVT-DTYATIDWIEGNLGTQLTKTEVSTELRGDSSET 252
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q D K+ H A++TT+ ++++G+ S + Y G V A + +
Sbjct: 253 QIVGAFYGHNDQHFDLDAKVWHRAEHTTADLITRGVIDDISRSVYEGVQDVGADAWDTSS 312
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ + ++L++ + A P + N H AT +I E LFY RG+ +A +
Sbjct: 313 YQRENTLMLSDESEADASPQLIINNHDTEASHSATVGQIDAEDLFYMTSRGVDPRSARNM 372
Query: 456 IVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
+V GF VL+++ E + ++LI L
Sbjct: 373 LVEGFFVPVLEEIDVDELRDDLEELIGARL 402
>gi|312129604|ref|YP_003996944.1| iroN-regulated abc transporter permease protein sufd
[Leadbetterella byssophila DSM 17132]
gi|311906150|gb|ADQ16591.1| Iron-regulated ABC transporter permease protein SufD
[Leadbetterella byssophila DSM 17132]
Length = 432
Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats.
Identities = 80/432 (18%), Positives = 154/432 (35%), Gaps = 32/432 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A+ + + P+ +++ + +L + + L
Sbjct: 28 QIRKEAFESYKQLGIPT---VKHEDWKYANLKGLEKHNFQRATEVNV-----IAEDLSAL 79
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+ L V + V +L + + +A E P+++ +
Sbjct: 80 PFSTLKGISLVFVNGNFVP------------ELSSDLHNESIKVLDFKQAETEIPEILNQ 127
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE--RTLI 233
+ V +ALN A G+ VY+P + + + F L
Sbjct: 128 HYGKAVNFQKEGLSALNVAFAQQGAVVYVPANATLEEPVLIKHINDSRNLEAFNAIHHLT 187
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ D+ + V +E ++ AV E+ ++A + Y +Q+
Sbjct: 188 VVDKNAEVKLVE-IFQSVGEQAAFTNAVSEIFVAEDARVDYYKIQDENDASYH------- 239
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V + +S + + +L GE Y + I NG Q +D+ T
Sbjct: 240 -VGTTQVVQKDKSYFYAATVTVNGGFVRNNLNLVLDGEYIESHMYGLYIPNGNQLVDNHT 298
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H N+ S + KGI G S + GK+ V + A + + C ++++ ++ +T
Sbjct: 299 LVDHRKPNSESNELYKGILDGKSKGVFNGKIYVQQDAQKTNAYQNCRNVILSDSASMNTK 358
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-F 472
P +E H TT K+ +E +FY RGIP+ A+ L + F +V+ + E
Sbjct: 359 PQLEIWADDVKCSHGTTTGKLDEEAIFYMQSRGIPKAEAVKLQLAAFAEDVVSQFKWETL 418
Query: 473 AVEAQKLIDISL 484
E LI L
Sbjct: 419 REELDVLILQKL 430
>gi|120437456|ref|YP_863142.1| FeS assembly protein SufD [Gramella forsetii KT0803]
gi|117579606|emb|CAL68075.1| FeS assembly protein SufD [Gramella forsetii KT0803]
Length = 437
Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats.
Identities = 98/445 (22%), Positives = 168/445 (37%), Gaps = 34/445 (7%)
Query: 50 EPDW-MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EPD M R A + + + P+ + L V P+ D +D
Sbjct: 19 EPDNGMDAIRNQAIKDFEDLGFPNKKNED---WKYTSLNSVLKHDYSVFPKKEDAIDYRD 75
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
++ Y I + + G+ +S ++ + +K V M + +
Sbjct: 76 IKKYLIHDIDTYDLVFIDGIYSSHLS--------------QTTHEKIDVCLMSSALTKDK 121
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTG 226
+ ++ Y + V P +LN+A +G+F++I K + + NE
Sbjct: 122 YRPIIDNYFNKVAPKS--GLNSLNTAFSKEGAFIHIHKNKQADKPIQIINFATGNESSLL 179
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R L++ADE S+V +E + L +V E+ A A + Y +QN S
Sbjct: 180 LQPRNLVVADENSHVQIIERHQSLTDHP-VLTNSVTEIFADKRAIVDYYKIQNDNASASL 238
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ S +S G +T + RGE+ + I G
Sbjct: 239 IDNTF--------IEQKDESHVSVHTFSFGGKLTRNNLNFYQRGERIDSTMKGVTIIEGK 290
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q +D T + H+ N S KGI S + GKV V + A + + +++L +
Sbjct: 291 QHVDHNTLVHHIEPNCESHQDYKGIFGDSSTGVFNGKVLVEKEAQKTNAYQSNNNILADD 350
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
++ P +E H T ++ ++ LFY RGIP + A L++ F VL+
Sbjct: 351 KATINSKPQLEIFADDVACSHGCTIGQLDEDALFYMQSRGIPRKEARGLMMYAFANNVLE 410
Query: 467 --KLPMEFAVEAQKLIDISLEGSVG 489
K+P E KLI LE +G
Sbjct: 411 SVKIP-EVKKRINKLIASKLEVDLG 434
>gi|116626729|ref|YP_828885.1| Iron-regulated ABC transporter permease SufD [Candidatus Solibacter
usitatus Ellin6076]
gi|116229891|gb|ABJ88600.1| Iron-regulated ABC transporter permease protein SufD [Candidatus
Solibacter usitatus Ellin6076]
Length = 420
Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats.
Identities = 90/420 (21%), Positives = 158/420 (37%), Gaps = 45/420 (10%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ R A+RR+ + P+ I F ++ A K G R
Sbjct: 22 PAWLQPLRDNAFRRFAELGFPT---IHNEEWRFTNIAPIARTKFAPG------------R 66
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T E + L + + T L+ G + P
Sbjct: 67 TGEVATKLAKGPIQLVFANGHLL---------TRPETLPAGLQAGGFA---------DDP 108
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQF 228
++K+L +N + ALN+A+ DG+ + + +G + ++ + T
Sbjct: 109 AAIEKHLGKYASFDENAFVALNTAMTQDGALIRVARGAVIAEPIELFYLTSTAATPIATH 168
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R LI+ E + S +E + AV E+V + A + + VQ
Sbjct: 169 PRALILIGENAQCSIVERYQGAG-EGAYFTNAVTEIVVGEGAVVDHYKVQQETLAAYH-- 225
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
V+ G S + + G A+ +C L E S G + I NG Q
Sbjct: 226 ------VSTIQAELGRSSVFASHSIALGGALVRNDANCTLS-EGSEGTLNGLYIVNGTQH 278
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+ T + H + S + KGI G S+ + GK+ V + A + + +L++ ++
Sbjct: 279 VDNHTAIDHRQPHANSHELYKGILDGKSHAVFNGKIFVRKDAQKTDSKQTNKNLVLSDDA 338
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
T P ++ H AT ++ E LFY RGI +E A L+V F ++V+ ++
Sbjct: 339 VVDTKPELQILADDVRCTHGATIGQLDAESLFYLQSRGIGKEDARNLLVFAFAQDVVDRI 398
>gi|194467983|ref|ZP_03073969.1| FeS assembly protein SufD [Lactobacillus reuteri 100-23]
gi|194452836|gb|EDX41734.1| FeS assembly protein SufD [Lactobacillus reuteri 100-23]
Length = 429
Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats.
Identities = 97/452 (21%), Positives = 173/452 (38%), Gaps = 38/452 (8%)
Query: 38 EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
++ I S NEP +++ RL A ++ P R +
Sbjct: 8 KEQILAASKANNEPQQLIDRRLNARELMEKLRLPRMQRFDFRTW---------------- 51
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P D + + P + E++ Q F + ++L++ GV
Sbjct: 52 PLIADQPLKWIKSDTNLVEKPTADDEVIKVTQ---------FGQTLLHVNLPQKLQEQGV 102
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I I A ++P+L KY T + +N A + A G F+YIPK V +
Sbjct: 103 ILTDIFTAARKYPELFNKYFMTAINPEENRLTAYHLAYLNAGLFLYIPKNVEIEKPIEAE 162
Query: 218 FRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ + L+IAD GS + +++ T EN ++EL+A +N+EI +S+
Sbjct: 163 IIQDSTQDEPLISHILVIADRGSRIKFIQHLTTVGDHEN-AANMMIELMAQENSEIDFSS 221
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ P + KR G + + W T L G+ C
Sbjct: 222 LDELGPH--------THTYFKRRADIGKDAHVEWAVGLMNDGATVGDMDSELLGDGGCAN 273
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
IA++ Q++ ++ + K+TT I +G+ S + G + GA ++
Sbjct: 274 SKMIAVTTRDQEVGVNNRVTNHGKHTTGLINQRGVILEKSELIFNGIGQIIHGAHGAKAD 333
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
Q L++ + P + + H A+ + + ++Y + RGIP A ++
Sbjct: 334 QQNRVLIMSDQARGDANPILLIAENDVEAGHAASVGPVDQQQMYYLMSRGIPRAQAERMV 393
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL +P A KLI I LE +
Sbjct: 394 IRGFLGAVLSAIP--AADVRNKLITI-LERKL 422
>gi|196230994|ref|ZP_03129854.1| FeS assembly protein SufD [Chthoniobacter flavus Ellin428]
gi|196224824|gb|EDY19334.1| FeS assembly protein SufD [Chthoniobacter flavus Ellin428]
Length = 438
Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats.
Identities = 89/410 (21%), Positives = 181/410 (44%), Gaps = 25/410 (6%)
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A+ ++ + P+ R F ++ + + ELL
Sbjct: 32 AAWEQFTKIPLPT--RTD-ERWRFANVKDLDLSPYLQPQPVDETTREELLA--------- 79
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
G++ + + D + E L + GV+++P+ +A+ E+PDL+++Y
Sbjct: 80 ----RSRGLEKAAGRMVFANDQLLSREVLSESLTRLGVVWLPLEQALVEYPDLLQQYFMR 135
Query: 180 VVP-VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+G +AAL+++ G +++P+G+ + + + ++ + F TLIIA+E
Sbjct: 136 EEAILGGQKFAALHASQVRTGMLLFVPRGIEIDLPVEAFHWLHGANSSCFPHTLIIAEER 195
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ V+ ++ + + L AV +L A++ Y QNW +
Sbjct: 196 AKVTVVDYYESADTNAPGLACAVNDLWLGAGAQVTYVCAQNWSREALAFQINAT------ 249
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G ++ + G LRG + ++ +++ Q++D+ T +H
Sbjct: 250 --VVGRDAQARSLFAQLGGRHVRSESVSHLRGPGGRSDMLALTVADNAQEVDARTFQIHE 307
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A NT+S ++ K + + G + V GA + + + +LL+ ++ A++ P +E
Sbjct: 308 APNTSSDLLYKNSLDDAARTIFSGLIRVDPGAQMTDAYQKVRNLLLSDDAEANSAPGLEI 367
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ + H AT+ +I E LFY + RGI + AA LIVNGF++EV+++L
Sbjct: 368 EADNVRCTHGATSGQIEQEELFYLMSRGISKRAAQKLIVNGFLQEVIERL 417
>gi|260061112|ref|YP_003194192.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
gi|88785244|gb|EAR16413.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
Length = 455
Score = 259 bits (661), Expect = 9e-67, Method: Composition-based stats.
Identities = 89/435 (20%), Positives = 158/435 (36%), Gaps = 36/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A R + + P + A + L + P+ +D ++ Y
Sbjct: 43 DIRSEAIRNFESKGFP---HRKMEAWKYTSLAPLQKVDFSLFPKEDSTLDYREVKQYFLH 99
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLV 173
+ + + G+ +S + E GV +S A+ + + ++
Sbjct: 100 EVDTYKIVFIDGIYSSYL----------------SETTHDGVDICLMSAALNKPMYRPII 143
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTGQFERT 231
Y + V + LN+A +G+++YIPK + NE R
Sbjct: 144 DVYFNKVASREE-SLTTLNTAFTREGAYIYIPKNKAPRKPVEILHLSTGNEASLLLQPRN 202
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ +E + + +E + L +V E+ A +A + Y VQ P S
Sbjct: 203 LIVVEENAELQVIERHQSLT-SNEVLTNSVTEIFAAKDAIVDYYKVQTDRPTASLIDNT- 260
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ S++S G +T + G + I Q +D
Sbjct: 261 -------YIDQKTNSQVSVHTFSFGGNLTRNNLNFYQDGNHMNSILKGVTILGDKQHVDH 313
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + S KGI S + GK+ V + A + F Q ++LLI + +
Sbjct: 314 HTLVHHQQPDCESHQDYKGIFGDQSTGVFNGKIIVDKIAQKTNAFQQNNNLLISDKASVN 373
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLP 469
T P +E H T ++ + LFY RGI ++ A AL++ F VL+ ++P
Sbjct: 374 TKPQLEIFADDVKCSHGCTIGQLDQDALFYLRSRGIGKKEAEALLMYAFANNVLESVRIP 433
Query: 470 MEFAVEAQKLIDISL 484
E +LI L
Sbjct: 434 -ELKGRINRLIAEKL 447
>gi|149369533|ref|ZP_01889385.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
gi|149356960|gb|EDM45515.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
Length = 437
Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats.
Identities = 98/442 (22%), Positives = 162/442 (36%), Gaps = 37/442 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A + + PS + L + P+ D++ + ++ Y
Sbjct: 24 LYDLRSNALKVFEEKGFPSKKE---ENWKYTSLNSLLKKDYCISPKGDTDIEFKNVKQYF 80
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPD 171
+ + + G V +++ E G+ +S A + +
Sbjct: 81 LHNVDTYKVVFIDG----------------VYSSYLSETTHDGIDVCLLSSAFDKSKYRP 124
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--E 229
+++ Y + LN+A +G+F++IPK + + F
Sbjct: 125 VIESYFNKAAKKE--GLTQLNTAFTKEGAFIHIPKNKEADKPIEIIYFSTGNEATLFVQP 182
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R LIIADE ++V +E + L AV E+ A A + Y +QN P S
Sbjct: 183 RNLIIADENAHVQIIERHQSLS-SNAVLTNAVTEIFADKRAMVDYYKIQNDTPEAS---- 237
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
V + S S G IT GE + I Q +
Sbjct: 238 ----LVDSTYIKQERESICSVHTFSFGGKITRNNLQFTQEGEYCDSILNGVTIIGDKQHV 293
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T + H+A+N S KGI S + GKV V + A F Q +++LI +
Sbjct: 294 DHNTLVHHIAENCESHQDYKGIFDDSSTGVFNGKVYVEKEAQKLDAFQQNNNILISDKAT 353
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--K 467
+ P +E H T ++ + LFY RGI E+ A AL++ F VL+ K
Sbjct: 354 INAKPQLEIFADDVKCSHGCTIGQMDSDALFYMRSRGIGEKEAKALLMYAFANNVLESVK 413
Query: 468 LPMEFAVEAQKLIDISLEGSVG 489
+P E KLI + S+G
Sbjct: 414 IP-ELKSRINKLIAEKIGVSLG 434
>gi|115372504|ref|ZP_01459812.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|310819044|ref|YP_003951402.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|115370466|gb|EAU69393.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|309392116|gb|ADO69575.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
Length = 441
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 91/444 (20%), Positives = 160/444 (36%), Gaps = 37/444 (8%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
+P W+ R R P+ R+ A + D+ + + L
Sbjct: 22 DPVWLRTLRQEGLERLAQAGFPT---TRHEAWKYTDVAPIVSRPFVPA---WPGKRVHLE 75
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
E+ +P D + E GV M + EA+ E
Sbjct: 76 ACVEQRALPGPR--------------WVFVDGLLAPELSSLEGLPPGVRVMSLREAVREE 121
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF- 228
+ ++ L + + ALN+A+ +G FV + G + + F ++ G Q
Sbjct: 122 GEALEAVLGQRARAEAHPFVALNAALLEEGVFVRVAPGTVAQVPVQLLFLVSGDGAAQVL 181
Query: 229 --ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R ++ + + +E + + AV E+V +NA + + +Q G
Sbjct: 182 ASPRIVVDVGANAEAALVEFYAGEEDGAS-FTNAVTEVVLGENARLHHYKLQAETEGA-- 238
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
Y+ + + S+ + G A+ S + GE + + + G
Sbjct: 239 -----YHLASLH-ARQARDSRFASHSFALGGALARNEVSSVFGGEGGECQLNGLYVGRGA 292
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q +D T + H TSR + KG+ G S T+ G+V V A H+ +LL+
Sbjct: 293 QHLDHRTDLDHAVPRCTSRELYKGVLDGRSRGTFHGRVLVRPDAQHTDATQSNRNLLLSE 352
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H A ++ ++ LFY RGIP A L+ F EV+
Sbjct: 353 EALVDTRPQLEILADDVKCAHGAVVGRLDEQALFYLRSRGIPRPEAEQLLTYAFASEVVG 412
Query: 467 KL---PMEFAVEAQKLIDISLEGS 487
+ P+ VE +L+ L G+
Sbjct: 413 AVALAPLRAQVE--RLVAERLLGT 434
>gi|332520189|ref|ZP_08396653.1| FeS assembly protein SufD [Lacinutrix algicola 5H-3-7-4]
gi|332044748|gb|EGI80942.1| FeS assembly protein SufD [Lacinutrix algicola 5H-3-7-4]
Length = 437
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/445 (20%), Positives = 163/445 (36%), Gaps = 47/445 (10%)
Query: 56 EWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
+ R A + + T PS W I +D + ++ + + + +
Sbjct: 26 DIRTEAIKTFETTGFPSKKEEAWKYTSLKNILKEDYSVFPKQENALEYKDIKKYFIHDID 85
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE-- 168
TY+ + I + L+ + G+ +S A+ +
Sbjct: 86 TYKIIFIDGKYSSHLS------------------------HVTHDGIDVCLMSSALNKPK 121
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+ +++ Y + + + +ALN+A +G++++IPK +
Sbjct: 122 YRPVIENYFNKIA--TKDSLSALNTAFSNEGAYIHIPKNKLVEKPIQIIHFSTGNEAALM 179
Query: 229 --ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R LI+ DE S+V +E + + L +V E+ A + Y +QN S
Sbjct: 180 LQPRNLIVVDENSHVQIIERHQSLTENP-VLTNSVTEIYGNKRAIVDYYKIQNDNKNASL 238
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ +S G + + GE+ I I
Sbjct: 239 IDNT--------YVDQKEQSHCLVHTFSFGGKLIRNNLNFYQNGERIDSTMKGITIIGDK 290
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q +D T + H+ N S KGI + + + GKV V + A + F +++L+ +
Sbjct: 291 QHVDHNTLVHHIEPNCESHQDYKGIFSDNATGVFNGKVVVEKEAQKTNAFQANNNILLSD 350
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+T P +E H T ++ + LFY QRGIPE+ A AL++ F VL
Sbjct: 351 KATINTKPQLEIFADDVKCSHGCTIGQLDESALFYMKQRGIPEKEARALLMFAFSNNVLD 410
Query: 467 --KLPMEFAVEAQKLIDISLEGSVG 489
K+P E KLI L ++G
Sbjct: 411 SVKIP-ELKQRITKLIANKLGVNIG 434
>gi|126662697|ref|ZP_01733696.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
gi|126626076|gb|EAZ96765.1| iron-regulated ABC transporter, membrane-spanning permease
[Flavobacteria bacterium BAL38]
Length = 438
Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/438 (20%), Positives = 154/438 (35%), Gaps = 42/438 (9%)
Query: 56 EWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
E R A + + P+ W +I +D + ++ + + + +
Sbjct: 26 ELRSNAIKNFENKGFPTKKEEAWKYTSLNSILKNDFSVFPKKENTIEFKDVKKFFLHEVD 85
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI-CEH 169
TY+ + I L+ G+ +S A+
Sbjct: 86 TYKVVFIDGIFSSFLSSTT------------------------HDGLDVCLMSSALTKPK 121
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF- 228
++ + ++ +LN+A +G++V IPK + +
Sbjct: 122 YKMIIDTYFNQIANKEDSLTSLNTAFSLEGAYVNIPKSKVVEKPIEIIYFSTGNEAALMT 181
Query: 229 -ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R LII E ++V +E L +V E+ A A + Y VQN
Sbjct: 182 QPRNLIIVGENAHVQIVERH-QSLNSNPVLTNSVTEVYAQKRAIVDYYKVQNDVQTA--- 237
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
N V + S++S G IT + +GE+ I I Q
Sbjct: 238 -----NLVDNTYIAQKQESRVSVHTFSFGGNITRNNLNFYHQGERIDSTLKGITIIGDKQ 292
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D T + H N S K I S + GK+ V + A + F Q +++LIG+
Sbjct: 293 HVDHYTLVQHATPNCESHQNYKTILNDSSTGVFNGKIFVEKEAQKTDAFQQNNNILIGDK 352
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+ P +E H T ++ + +FY QRGIP++ A AL++ F EV
Sbjct: 353 ATINAKPQLEIFADDVKCSHGCTIGQLDESAMFYMQQRGIPKKEAKALLMYAFTSEVTNS 412
Query: 468 LPM-EFAVEAQKLIDISL 484
+ + E + +LI L
Sbjct: 413 IKIPELKAKIARLIANKL 430
>gi|229916533|ref|YP_002885179.1| FeS assembly protein SufD [Exiguobacterium sp. AT1b]
gi|229467962|gb|ACQ69734.1| FeS assembly protein SufD [Exiguobacterium sp. AT1b]
Length = 422
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 101/439 (23%), Positives = 181/439 (41%), Gaps = 40/439 (9%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P WM+ R A T+ P +I+ DF AA +GP+ D + ++
Sbjct: 22 PAWMVNRRKEAAELAPTLALPKVEKIKIDKWDF------AAGDVNLGPK--DGLTADI-- 71
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
E L G + V V+ + V GV+FM I EA+ +HP
Sbjct: 72 ------------ESLLGDHRTNVLVE--RNGHVVYNELS---MPEGVLFMGIKEAMEQHP 114
Query: 171 DLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
+LV+KY T V V + +ALN+A+ G+F+Y+PK + L F + + +
Sbjct: 115 ELVEKYFMTEGVRVDEERLSALNAALTNGGAFIYVPKNTQLKDPLQAIFTMEQANGALYH 174
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
T+++ADEGS V+Y+E +E V E+ A +NA++ + V
Sbjct: 175 HTILVADEGSEVTYIENFL-SGTNEPHTVNVVTEVFAGENAKVVFGGVDQLAESAL---- 229
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
F+ +RG ++ W + L G+ + + ++ I G Q+
Sbjct: 230 ---TFMNRRGVVYA-NGRLDWALGHMNDGNSVVETKTHLVGDNTYSDTKAVTIGRGAQKQ 285
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ + H K + I+ G+ + + G +H GA+ S L++
Sbjct: 286 NFNIRTDHFGKASEGFILIHGVQKDAATAIFSGTSMIHHGASKSNGVQTERVLMLSEKAR 345
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P + H A+ ++ D L+Y + RG+ + A LI++GF+ V+++L
Sbjct: 346 GDANPILLIDEDDVMAGHAASVGRVDDVQLYYLMSRGLSRQEAERLIIHGFLTPVVEELA 405
Query: 470 MEFAVEAQKLIDISLEGSV 488
++ + + +EG V
Sbjct: 406 IDSVKDR---LREVIEGKV 421
>gi|260662974|ref|ZP_05863867.1| FeS assembly protein SufD [Lactobacillus fermentum 28-3-CHN]
gi|260552595|gb|EEX25595.1| FeS assembly protein SufD [Lactobacillus fermentum 28-3-CHN]
Length = 431
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/452 (21%), Positives = 179/452 (39%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I +S + EP +L+ RL A + K P+ R + P P
Sbjct: 10 DQIEEVSHQHGEPYTLLDRRLEALQLMADQKMPTIPRYHFEDW----------PLLSDQP 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ +D DP L G+ + +++ VQ + + EEL++ GVI
Sbjct: 60 LTFEDSDPHLAE-----GLLDSDPDVIRIVQVGQTTTEV---------QLPEELRQQGVI 105
Query: 159 FMPISEAICEHPDLVKKY-LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I A HP L++++ ++ VV G+N A + A G F+Y+PKGV +
Sbjct: 106 LTDIFSAARIHPRLIERFLMNRVVKPGENKMTAAHLAFLNAGVFLYVPKGVEIDTPIEAE 165
Query: 218 FRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ K LI+A+ S + +L+ + + +VE+VA + + + +S+
Sbjct: 166 IIQDATKDQPLNSHLLIVAEAQSKIHFLQH-LQTVGERSVPANMMVEIVAQEGSNVAFSS 224
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ P + KR G + + W T L G+ +
Sbjct: 225 LDELGPN--------THVYFKRRANIGRDAHVEWAVGLMNDGNTLGDMDSELIGQGGYAD 276
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+IA++ G Q + ++ + K TT I +G+ S + G + GA ++
Sbjct: 277 AKAIAVTTGSQLMAVNNRVTNRGKKTTGLINQRGVLLEKSELIFNGIGQIVHGAHGAKAD 336
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
Q L++ + P + + H A+ + E ++Y + RGI A ++
Sbjct: 337 QQNRVLMMSGDAHGDANPILLIDENDVVAGHAASVGPVDPEQMYYLMSRGIDRATAERMV 396
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL +P + KL+ + LE +
Sbjct: 397 IRGFLGSVLTAIPAKNVR--DKLVAV-LERKL 425
>gi|86134637|ref|ZP_01053219.1| FeS assembly protein SufD [Polaribacter sp. MED152]
gi|85821500|gb|EAQ42647.1| FeS assembly protein SufD [Polaribacter sp. MED152]
Length = 437
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 95/438 (21%), Positives = 164/438 (37%), Gaps = 33/438 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A + + P+ + A + L + P V+ ++ Y
Sbjct: 26 EIRSKALENFDKLGFPT---KKLEAWKYTSLNSLLKNDYSIFPDREKAVELADVKKYFIH 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
I + + G +S ++ +K V M + ++ +++
Sbjct: 83 DIDTYKVVFIDGKYSSFLSATTH--------------EKFDVCLMSSALNKPKYKSVIET 128
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TGQFERTLI 233
Y + V + +LN+A ++G+++YIPK + + T R LI
Sbjct: 129 YFNKVAK--QDNLTSLNTAFASEGAYIYIPKNIEVQKPIQIINFTTGSEPATMIQPRNLI 186
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ +E S+V +E + L V E+ A +A + Y +QN S N
Sbjct: 187 VVEENSHVQIIERHQSLT-SNAVLSNVVTEVFAAKSATVDYYKIQNDNTNASLVDNTYVN 245
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ S +S G IT + GE I I G Q +D T
Sbjct: 246 --------QKSNSVVSVHTFSFGGNITRNNLNFYQNGEHIDSILKGITIIEGKQHVDHHT 297
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+ N S KGI S + GKV V + A + + Q +++L+ + +
Sbjct: 298 LVHHIEPNCESHQDYKGIFDERSTGVFNGKVIVEKEAQKTNAYQQNNNVLVSDKATINAK 357
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLPME 471
P +E H T ++ D+ LFY QRGIP++ L++ F VL+ K+P E
Sbjct: 358 PQLEIFADDVKCSHGCTIGQLDDDALFYMQQRGIPKKEGRGLLMFAFANTVLESVKIP-E 416
Query: 472 FAVEAQKLIDISLEGSVG 489
KLI L ++G
Sbjct: 417 VKSRITKLIANKLNVNIG 434
>gi|146298940|ref|YP_001193531.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
gi|146153358|gb|ABQ04212.1| FeS assembly protein SufD [Flavobacterium johnsoniae UW101]
Length = 438
Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 156/443 (35%), Gaps = 42/443 (9%)
Query: 56 EWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
+ R A + + P+ W AI +D + ++ + + +
Sbjct: 26 DIRTNALKNFENKGFPTKKEEAWKYTSLNAILKNDFTVFPKQENAIEFNQVKKYFLHEID 85
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI-CEH 169
TY+ + I L+ G+ +S A+
Sbjct: 86 TYKLVFIDGVFSSHLSSTT------------------------HDGIDVCLMSSALTKPK 121
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF- 228
+V + D+ +LN+A +G+F+ IPK + +
Sbjct: 122 YKMVIDTYFNQIASKDDSLTSLNTAFAIEGAFINIPKKKVADKPIEIMYFSTGNEAALMV 181
Query: 229 -ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R L+I E S+V +E + L +V E+ A A + Y +QN
Sbjct: 182 QPRNLVIVGENSHVQIIERH-QSLNENPVLTNSVTEIFAQKRAIVDYYKIQNDNNEA--- 237
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
N + + S S G +T + GE+ I+I N Q
Sbjct: 238 -----NLIDNTYVSQQQESHASVHTFSFGGNLTRNNLNFYHYGERLTSTLNGISILNDKQ 292
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D T + H N S KGI + S + GKV V + A + F + +++L+ +
Sbjct: 293 HVDHYTLVNHAQPNCESFQDYKGIFSDRSTGVFNGKVLVEKEAQKTNAFQKSNNILLSDK 352
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+ P +E H T ++ + +FY RGIP++ A AL++ F V++
Sbjct: 353 ATINAKPQLEIFADDVKCSHGCTVGQLDETAMFYMQSRGIPKKEAKALLMYAFSNAVIES 412
Query: 468 LPM-EFAVEAQKLIDISLEGSVG 489
+ + E K+I L ++G
Sbjct: 413 IKIPELKQRITKIIATKLGVNLG 435
>gi|323339981|ref|ZP_08080248.1| FeS assembly protein SufD [Lactobacillus ruminis ATCC 25644]
gi|323092623|gb|EFZ35228.1| FeS assembly protein SufD [Lactobacillus ruminis ATCC 25644]
Length = 428
Score = 256 bits (655), Expect = 5e-66, Method: Composition-based stats.
Identities = 94/439 (21%), Positives = 173/439 (39%), Gaps = 37/439 (8%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EP W E R A+ + + PS+ +I+Y E
Sbjct: 17 GEPRWFTEKRSAAFDKAKELPMPSFQKIKYHRWPIQ---------------------LEK 55
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ K + E+ ++ + + D EELK+ GVI + A+ E
Sbjct: 56 ELVFSKSELDENEKSVIDDSENLLIEFGQSTD----TIKISEELKEKGVIVADLKAALTE 111
Query: 169 HPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KGTG 226
H +L ++Y V +N A ++A T G+ +YIPK ++TYF + K
Sbjct: 112 HRELFERYYMQKAVKADENRLTAQHAAKVTSGALIYIPKNTIIEKPITTYFIQDATKAED 171
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
L+IAD S VSYLE + +VE++A + +K+++
Sbjct: 172 YVHHVLLIADSCSEVSYLEN-LLTVGNNETTANIIVEVIARPGSHVKFASFDRLGE---- 226
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
++ +RG +KI W+ L G S E +AI+ G
Sbjct: 227 ---NTTTYLNRRG-YLEQDAKIDWSMGMMNDGNIVGDFDSDLIGNGSHAEVKVVAITTGK 282
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q T++ + K++ I+ G+ S+ + G + GA + + L++
Sbjct: 283 QVQGIDTRVTNYGKHSIGHILQHGVILAKSSLIFNGIGHIIHGAKGADAQQESRVLMLST 342
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
P + ++ + H A+ ++++E L+Y + RG+P++ A L++ GF+ VL
Sbjct: 343 KARGDANPILLIDDNDVSAGHAASVGRVNEEQLYYLMSRGLPKKLAERLVIRGFLGPVLT 402
Query: 467 KLP-MEFAVEAQKLIDISL 484
+P + +I+ L
Sbjct: 403 AVPSISVRKRLSDMIEEKL 421
>gi|289582087|ref|YP_003480553.1| SufBD protein [Natrialba magadii ATCC 43099]
gi|289531640|gb|ADD05991.1| SufBD protein [Natrialba magadii ATCC 43099]
Length = 408
Score = 256 bits (655), Expect = 5e-66, Method: Composition-based stats.
Identities = 111/451 (24%), Positives = 200/451 (44%), Gaps = 61/451 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLYYYAAPKS 94
L ++ +R IS + +EP+W+LE RL A ++ P R + +L Y +
Sbjct: 13 LTDEQVRQISDELDEPEWLLETRLDALEALESLDMPDVIRTPGRDWTNLHELDYESLVDP 72
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ ++ D V PE E E+LA
Sbjct: 73 LNAAENKDQVGPE-------------EAEVLA---------------------------- 91
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
SEA+ EH +L+K++ +VV +N+ AL++A+F+ G+ +Y+P+GV
Sbjct: 92 -------WSEAVNEHEELLKEHFGSVVDPQENYLTALSTALFSTGTVIYVPEGVDAE--- 141
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
R + F TL++ +E S V+ LE + + + Q ++ +VE+VA +N+ ++Y
Sbjct: 142 GVTVRTEQNSRSLFNYTLVVTEESSSVTILERQSTGEEQDEQYYSGIVEIVAGENSNVQY 201
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
++QN YNF KRGD + I W + G+ +T L G+ S
Sbjct: 202 GSLQNLSEEA-------YNFTLKRGDA-DTYATIDWIEANLGTQLTKSGVETELNGDGSE 253
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + Q D ++ H A++TT+ +V++G++ + + Y G V R A +
Sbjct: 254 SQIVGAFYGHNDQHFDIDARVWHRAEHTTADLVTRGVTDDVARSVYEGVQDVGRSAWDTS 313
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
++ + ++L++ + A P + N H AT +I E L Y RG+ A
Sbjct: 314 SYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQIDQEDLLYMTSRGVQPRDARN 373
Query: 455 LIVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
++V GF VL+++ E + ++LI L
Sbjct: 374 MLVEGFFVPVLEEIAVDELRDDLEELIAARL 404
>gi|163753693|ref|ZP_02160816.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
gi|161325907|gb|EDP97233.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
Length = 439
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 91/440 (20%), Positives = 155/440 (35%), Gaps = 32/440 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A + PS + + L + PQ V+ + ++ Y
Sbjct: 25 LNEIRNEAINTFQQKGFPS---KKDEDWKYTSLNALLKHDYCISPQQETAVEFKEIKKYF 81
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH-PDL 172
I + + G +S F E G+ +S A+ + +
Sbjct: 82 IHDIDTYKIVFIDGKYSS----------------FLSETTHDGIDVCLMSSALNKPKYKI 125
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTGQFER 230
+ D+ +LN+A ++G++++IPK + NE R
Sbjct: 126 IIDSYYNKAAKSDHSLTSLNTAFASEGAYIHIPKNKVVEKPIQIIHFSTGNEATLMLQPR 185
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+ E S+V +E + L +V E+ A A + Y +QN S
Sbjct: 186 NLIVVGENSHVQIIERHQSLT-SNVVLTNSVTEVFANKRAIVDYYKIQNDNQQASLIDNT 244
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ S S G + +GE I I Q +D
Sbjct: 245 --------YISQKQSSHASVHTFSFGGKLVRNNLQFFQKGEHIDSTMKGITIIGDKQHVD 296
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + H+ N S KGI S + GKV V + A + F +++L+ +
Sbjct: 297 HNTLVHHIEPNCESHQDYKGIFGDRSTGVFNGKVVVEKEAQKTNAFQANNNILVDDKATI 356
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+T P +E H T ++ + LFY RGIP++ A AL++ F VL+ + +
Sbjct: 357 NTKPQLEIFADDVKCSHGCTIGQLDKDALFYLRSRGIPKKEAKALLMYAFANNVLESVKI 416
Query: 471 EFAV-EAQKLIDISLEGSVG 489
KLI L ++G
Sbjct: 417 NAIKTRINKLIAQKLGVNLG 436
>gi|225010410|ref|ZP_03700882.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
gi|225005889|gb|EEG43839.1| FeS assembly protein SufD [Flavobacteria bacterium MS024-3C]
Length = 438
Score = 256 bits (654), Expect = 6e-66, Method: Composition-based stats.
Identities = 91/440 (20%), Positives = 169/440 (38%), Gaps = 36/440 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + P+ + A + L + P+ ++ + ++ Y
Sbjct: 26 DVRSAAMKVFENQGFPT---KKMEAWKYTSLKSLEKLDFNIFPKEAATLEYKDVKKYFLH 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLV 173
+ + + G V ++F E G+ +S A+ + + ++
Sbjct: 83 EVDTYKIVFVDG----------------VYSSFLSETTHQGIDVCLMSAALTKEMYKPII 126
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERT 231
+ Y + V +N A LN+A +G++++IPK + + + R
Sbjct: 127 EAYFNKVASKEENLTA-LNTAFSKEGAYIHIPKNTQAMKPIEIIHFATGREQALLLQPRN 185
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L++ +E + V LE + + AV E+ A +A I + VQN
Sbjct: 186 LVVVEENAEVQILERHQSLS-ENAVFTNAVTEIFAAKSAIIDFYKVQN--------DNNS 236
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ V + +S ++ G +T + GE+ + I Q +D
Sbjct: 237 ASLVDNTYIDQHSQSVVTLHTFSFGGKMTRNNLNFYQNGERIDSTMKGVTIIGDGQHVDH 296
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H+ N S KGI G S + GK+ V R A + F Q ++LLI + +
Sbjct: 297 HTLVHHIQPNCESHQDYKGIYDGNSTGVFNGKIMVDRLAQKTNAFQQNNNLLISDKSSIN 356
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLP 469
T P +E H T ++ + LFY RGI ++ A AL++ F VL+ ++P
Sbjct: 357 TKPQLEIFADDVKCSHGCTIGQLDHDALFYLQSRGIGKKEAQALLMYAFANNVLESVRIP 416
Query: 470 MEFAVEAQKLIDISLEGSVG 489
E LI L ++G
Sbjct: 417 -ELKKRVNALIAEKLGVNLG 435
>gi|298207477|ref|YP_003715656.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
gi|83850113|gb|EAP87981.1| FeS assembly protein SufD [Croceibacter atlanticus HTCC2559]
Length = 437
Score = 256 bits (654), Expect = 6e-66, Method: Composition-based stats.
Identities = 86/445 (19%), Positives = 160/445 (35%), Gaps = 47/445 (10%)
Query: 56 EWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
+ R A + + P+ W ++ D + + + + + +
Sbjct: 26 DIRSEAIKAFEEQGFPTKKQEAWKYTSLNSVLKQDYSIFPKKEDAIDYRDVKKYFIHDID 85
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI--CE 168
TY + I L+ K V +S A+ +
Sbjct: 86 TYNIVFIDGIYSSHLSQTTHDKFDV------------------------CLMSSALNHEK 121
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTG 226
+ +++ Y + + P + +LN+A +G++++IPK + NE
Sbjct: 122 YKPVIENYFNKIAPK--DGLNSLNTAFSHEGAYIHIPKNKLVDKPIQIVNFATGNEASLL 179
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R L++ E S+V +E + + AV E+ A A + Y +QN S
Sbjct: 180 LQPRNLVVVGENSHVQIIERHQSLNDNP-VFTNAVTEIFADKRAIVDYYKIQNDRQSASL 238
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ S S G +T + GE+ + I
Sbjct: 239 IDNT--------YIDQKGESLCSVHTFSFGGKLTRNNLNFYQNGERINSVLNGVTIIEDK 290
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q +D T + H+ N S KGI + + GKV V++ A + + +++L+ +
Sbjct: 291 QHVDHNTLVHHIEPNCESHQDYKGIFDDKAVGVFNGKVVVNKEAQKTNAYQSNNNILVSD 350
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
++ P +E H T ++ ++ LFY RGIP + A AL++ F VL+
Sbjct: 351 KATINSKPQLEIFADDVRCTHGCTIGQLDEDALFYMKSRGIPHKEARALLMYAFANNVLE 410
Query: 467 --KLPMEFAVEAQKLIDISLEGSVG 489
K+P E K+I L S+G
Sbjct: 411 SVKIP-EVKKRINKIIANKLNVSLG 434
>gi|313127092|ref|YP_004037362.1| iron-regulated ABC transporter permease sufd [Halogeometricum
borinquense DSM 11551]
gi|312293457|gb|ADQ67917.1| Iron-regulated ABC transporter permease protein SufD
[Halogeometricum borinquense DSM 11551]
Length = 402
Score = 256 bits (654), Expect = 6e-66, Method: Composition-based stats.
Identities = 106/459 (23%), Positives = 196/459 (42%), Gaps = 62/459 (13%)
Query: 29 VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLY 87
+ P L+E+ +R IS +++EP+W+LE RL A ++ P + + + L
Sbjct: 2 SAQLPANLSEETVREISEQRDEPEWLLETRLSALAALDDIELPDVIQTPGRRWTNLEAL- 60
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
+E L P+ + +
Sbjct: 61 -----------------------DFEDLVDPLNQSDE----------------------- 74
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
E + GV + +EA E D+++ V N+ AL++A+FT G+F+Y+P+G
Sbjct: 75 -TERVTDEGVHVLSFTEAFDEFGDVLEANFGQTVDPESNYLTALSTALFTTGTFIYVPEG 133
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE-NQLHAAVVELVA 266
V R F TL++ +E S V+ LE + E + + +VE+
Sbjct: 134 VDAED---VKVRAEMNSKSLFSHTLVVTEESSSVTILERIDSGASAEGARYFSNLVEIAT 190
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
+N+ ++Y ++QN Y++ KRGD + I+W + GS +T
Sbjct: 191 GENSYVQYGSLQNLDED-------TYHYTLKRGDA-DVYGTINWIEGNIGSRLTRSDVET 242
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L G+ S + + Q +D ++ H A+NTT+ +V++G+ + + Y G V
Sbjct: 243 ELNGDSSETQIVGAFFGHEDQHLDLNARVWHNAENTTADLVTRGVLDDDARSVYEGVQDV 302
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
R A ++ ++ + ++L++ + A P + N H AT ++ E LFY + R
Sbjct: 303 GRDAWNTSSYQRENTLMLSDESEADASPKLIIHNHDTEASHSATVGQVDKEDLFYMISRS 362
Query: 447 IPEEAAIALIVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
+P+ A ++V GF VL ++ EF + ++LI L
Sbjct: 363 VPQLQARNMLVEGFFVPVLDEIAVDEFREDLEELISARL 401
>gi|114331235|ref|YP_747457.1| FeS assembly protein SufD [Nitrosomonas eutropha C91]
gi|114308249|gb|ABI59492.1| Iron-regulated ABC transporter permease protein SufD [Nitrosomonas
eutropha C91]
Length = 435
Score = 256 bits (654), Expect = 6e-66, Method: Composition-based stats.
Identities = 90/437 (20%), Positives = 161/437 (36%), Gaps = 38/437 (8%)
Query: 38 EDIIRFISAKK-NEPD----WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
E +I S +K EP ++ R A R +++ P+ IR F D+
Sbjct: 11 EKLIE--SWRKEGEPSRTVSYLNRLRANALSRIESLRLPT---IRDEEWRFTDIS----- 60
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
+ + P T G+ ++ L V VD + L
Sbjct: 61 ------SLRNTLFPR-ASTASLPGLDSQKSTFLDEPTCRLVFVDGQYMPGL------SGL 107
Query: 153 KKSG-VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
G +I +SE ++YL + D+ + ALN+A+ DG + IP V
Sbjct: 108 TDDGSIIVCSLSELTGICASKTEQYLGQLADFQDDVFVALNTALMHDGICIVIPANVSIT 167
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ + + + K + R L++A+ + V+ +E A Q + L AV E+ ++A
Sbjct: 168 VPVHILYITSGKEVAAYPRCLLVAESEAEVTIVEEYVAWQEGVS-LTNAVTEIYVGESAR 226
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ + VQ + L G+ I+ L GE
Sbjct: 227 VNHIRVQREASQAFHIANNST--------FVAKTAHYDSVNLALGARISRFDQKITLAGE 278
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ + +A+ Q D+ T + H + + SR + K I ++ + G++ V +
Sbjct: 279 GAECQIDGLALIADRQLADTHTFIDHASPHGRSRQLHKCIVDESAHGVFSGEIMVRPHSQ 338
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ +LL+ T P +E H AT ++ E LFY RG EE
Sbjct: 339 QTDARQLNHNLLLSEKARMDTKPQLEIFADDVKCAHGATVGQLDKESLFYLQSRGFAEEV 398
Query: 452 AIALIVNGFVREVLQKL 468
A L+ F E++ ++
Sbjct: 399 ARNLLTYAFGGEIINRV 415
>gi|184155571|ref|YP_001843911.1| hypothetical protein LAF_1095 [Lactobacillus fermentum IFO 3956]
gi|227514948|ref|ZP_03944997.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus fermentum ATCC 14931]
gi|183226915|dbj|BAG27431.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|227086712|gb|EEI22024.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus fermentum ATCC 14931]
Length = 431
Score = 256 bits (654), Expect = 6e-66, Method: Composition-based stats.
Identities = 97/452 (21%), Positives = 177/452 (39%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I +S + EP +L+ RL A + K P+ R + P P
Sbjct: 10 DQIEEVSHQHGEPYTLLDRRLEALQLMADQKMPTIPRYHFEDW----------PLLSDQP 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ +D DP L G+ + +++ VQ + + EEL++ GVI
Sbjct: 60 LAFEDSDPHLAE-----GLLDSDPDVIRIVQVGQTTTEV---------QLPEELRQQGVI 105
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I A HP L++++ VV G+N A + A G F+Y+PKGV +
Sbjct: 106 LTDIFSAARIHPRLIERFFMNRVVKPGENKMTAAHLAFLNAGVFLYVPKGVEIDTPIEAE 165
Query: 218 FRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ K LI+A+ S + +L+ + + +VE+VA + + + +S+
Sbjct: 166 IIQDATKDQPLNSHLLIVAEAQSKIHFLQH-LQTVGERSVPANMMVEIVAQEGSNVAFSS 224
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ P + KR G + + W T L G+ +
Sbjct: 225 LDELGPN--------THVYFKRRANIGRDAHVEWAVGLMNDGNTLGDMDSELIGQGGYAD 276
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+IA++ G Q + ++ + K TT I +G+ S + G + GA ++
Sbjct: 277 AKAIAVTTGSQLMAVNNRVTNRGKKTTGLINQRGVLLEKSELIFNGIGQIVHGAHGAKAD 336
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
Q L++ + P + + H A+ + E ++Y + RGI A ++
Sbjct: 337 QQNRVLMMSGDAHGDANPILLIDENDVVAGHAASVGPVDPEQMYYLMSRGIDRATAERMV 396
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL +P + KL+ + LE +
Sbjct: 397 IRGFLGSVLTVIPAKNVR--DKLVAV-LERKL 425
>gi|294054747|ref|YP_003548405.1| FeS assembly protein SufD [Coraliomargarita akajimensis DSM 45221]
gi|293614080|gb|ADE54235.1| FeS assembly protein SufD [Coraliomargarita akajimensis DSM 45221]
Length = 431
Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats.
Identities = 102/442 (23%), Positives = 180/442 (40%), Gaps = 26/442 (5%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
NEP W+ R ++ + PS R F + + D EL
Sbjct: 13 NEPAWLTTRRDEGKAQFEILPAPS---ARDERWRFASVGRLSIDGFAPAEVPADTKLAEL 69
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ E+ L + ++ D+ + EEL GVI++P++EAI +
Sbjct: 70 V-----------ERSNLVTERAGQLIFAD--DATAQFEGISEELAAKGVIYLPVAEAIQK 116
Query: 169 HPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
HP+L++KY +G + L++ + GS +++PKGV Y+ + +
Sbjct: 117 HPELLEKYFLQESTELGSEKFFGLHAQLVKAGSILFVPKGVEIEKPFVNYYWTTQAKSAV 176
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F TLIIA++ S + ++ + L AV + A + A + VQ+W
Sbjct: 177 FPHTLIIAEDNSKAAVVDIFFSDTEANEALSVAVSNIHAGNGANVFRKVVQDWNEKTVSF 236
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ G +++ + G+ + G + + YS+ ++ Q
Sbjct: 237 QLDTT--------IAGRDTQVKNLAVNIGAERARFENQTRIEGPGADVKMYSLTVAEEKQ 288
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+ D T H A N S ++ K S + G + V GA + + +LL+
Sbjct: 289 EFDQRTFQTHNAGNAVSDLLYKNALLDSSRTIFSGLIKVAEGAQQTDAYQTNRNLLLDPT 348
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
A+ +P +E + H ATT + +E LFY +QRGI + A+ L+V GF EV++K
Sbjct: 349 AEANALPGLEILANDVKCSHGATTGNVDEEELFYMMQRGIHKRTAMQLMVFGFFEEVIEK 408
Query: 468 LP-MEFAVEAQKLIDISLEGSV 488
+ E A + LI E +
Sbjct: 409 VDSDELADNLRTLIRNKFEAKI 430
>gi|299783321|gb|ADJ41319.1| Iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus fermentum CECT 5716]
Length = 431
Score = 256 bits (653), Expect = 8e-66, Method: Composition-based stats.
Identities = 97/452 (21%), Positives = 177/452 (39%), Gaps = 38/452 (8%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I +S + EP +L+ RL A + K P+ R + P P
Sbjct: 10 DQIEEVSHQHGEPYTLLDRRLEALQLMADQKMPTIPRYHFEDW----------PLLSDQP 59
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ +D DP L G+ + +++ VQ + + EEL++ GVI
Sbjct: 60 LAFEDSDPHLAE-----GLLDSDPDVIRIVQVGQTTTEV---------QLPEELRQQGVI 105
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I A HP L++++ VV G+N A + A G F+Y+PKGV +
Sbjct: 106 LTDIFSAAQIHPRLIERFFMNRVVKPGENKMTAAHLAFLNAGVFLYVPKGVEIDTPIEAE 165
Query: 218 FRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ K LI+A+ S + +L+ + + +VE+VA + + + +S+
Sbjct: 166 IIQDATKDQPLNSHLLIVAEAQSKIHFLQH-LQTVGERSVPANMMVEIVAQEGSNVAFSS 224
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ P + KR G + + W T L G+ +
Sbjct: 225 LDELGPN--------THVYFKRRANIGRDAHVEWAVGLMNDGNTLGDMDSELIGQGGYAD 276
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+IA++ G Q + ++ + K TT I +G+ S + G + GA ++
Sbjct: 277 AKAIAVTTGSQLMAVNNRVTNRGKKTTGLINQRGVLLEKSELIFNGIGQIVHGAHGAKAD 336
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
Q L++ + P + + H A+ + E ++Y + RGI A ++
Sbjct: 337 QQNRVLMMSGDAHGDANPILLIDENDVVAGHAASVGPVDPEQMYYLMSRGIDRATAERMV 396
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL +P + KL+ + LE +
Sbjct: 397 IRGFLGSVLTVIPAKNVR--DKLVAV-LERKL 425
>gi|312870214|ref|ZP_07730345.1| FeS assembly protein SufD [Lactobacillus oris PB013-T2-3]
gi|311094237|gb|EFQ52550.1| FeS assembly protein SufD [Lactobacillus oris PB013-T2-3]
Length = 428
Score = 256 bits (653), Expect = 9e-66, Method: Composition-based stats.
Identities = 98/445 (22%), Positives = 169/445 (37%), Gaps = 39/445 (8%)
Query: 45 SAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDV 104
S + EP +L RL A ++ P R + P P
Sbjct: 15 SQQNEEPASLLARRLAARDLMAQLRLPRMQRFNFRDW----------PLIADQPLEWVSS 64
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
D L P E + V + V V E L+ +GV+ I
Sbjct: 65 DTNLEE-----IAPDDEVIRVTQVGQTTVKV-----------HIPERLRAAGVVLTDIFT 108
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEK 223
A ++P++ +KY + + +N A + A G F+Y+PK V + + N +
Sbjct: 109 AARQYPEMFEKYFMSAIKTDENLLTAYHVAYLNAGLFLYVPKNVEIEKPIEAELVQDNTQ 168
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
G L++AD GS V +++ T N L ++EL+A DN+EI +S++
Sbjct: 169 GQPLISHILVVADRGSKVKFIQHLTTVGDQAN-LANMMIELIARDNSEIDFSSLDELGAQ 227
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
+ KR G + + W T L GE IA++
Sbjct: 228 --------THTYFKRRADIGRDAHVEWAVGLMNDGDTVGDMDSELLGEGGYANSKMIAVT 279
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q++ ++ + K+TT I +G+ S + G + GA S+ Q L+
Sbjct: 280 TRKQEVGVNNRVTNHGKHTTGLINQRGVILENSELIFNGIGQIIHGAHGSKADQQNRVLI 339
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ + P + + H A+ + ++Y + RGIP + A +++ GF+
Sbjct: 340 MSDQARGDANPILLIDENDVEAGHAASVGPVDPHQMYYLMSRGIPRKQAERMVIRGFLGA 399
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSV 488
VL +P A KL++I LE +
Sbjct: 400 VLSAIP--AADVRNKLVEI-LERKL 421
>gi|227892244|ref|ZP_04010049.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus salivarius ATCC 11741]
gi|227865966|gb|EEJ73387.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus salivarius ATCC 11741]
Length = 416
Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats.
Identities = 101/446 (22%), Positives = 174/446 (39%), Gaps = 45/446 (10%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
I + + EP+W R A + T K PS+ +I+Y D + + G
Sbjct: 6 IDELIELRKEPEWFRAKRNEAKQLIETTKLPSFQKIKYHDWDIN----------VDGTSV 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+DD + A + S E GVI
Sbjct: 56 IDDQP-----------------------KFDTNADVYQYASNKAQIKLPSEFLDKGVIVE 92
Query: 161 PISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
+A+ H D++KKY + + DN A + A G VY+PK V L+ +
Sbjct: 93 DFEDALINHEDIMKKYFMEKGLKMDDNRLLAEHVANLQSGVLVYVPKNVDLETPLTCEYI 152
Query: 220 INEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
N + LI+ + S +SY+E +N VVE++A D + I +++V
Sbjct: 153 QNSRVEEDYVHHVLIVTEANSSLSYVERLKTDGDKKN-TANIVVEVIAGDGSRIHFASVD 211
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
N ++ +RG + SKI W S +T L G+ S E
Sbjct: 212 NL-------SKNTTAYMNRRGYLQ-RDSKIDWAMGMMNSGLTIGDFDSDLVGDGSHAELK 263
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+ IS Q T++ ++ KNT I+ G++ S T+ G V + + S +
Sbjct: 264 VVGISTSDQIQGIDTRVTNIGKNTIGHILQHGVALDASELTFNGIGHVMKRSKGSDAQQE 323
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ P + ++ H A+ +++ E L+Y + RG+ + A L++
Sbjct: 324 SRILMLSPQARGDANPILLIDDNDVTAGHAASIGRVNPEQLYYLMSRGLQKRLAEKLVIR 383
Query: 459 GFVREVLQKLPM-EFAVEAQKLIDIS 483
GF+ VL ++P+ E E +LI+
Sbjct: 384 GFLAPVLDEIPLKEIRNEFSELIERK 409
>gi|161528004|ref|YP_001581830.1| FeS assembly protein SufD [Nitrosopumilus maritimus SCM1]
gi|160339305|gb|ABX12392.1| FeS assembly protein SufD [Nitrosopumilus maritimus SCM1]
Length = 466
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 108/452 (23%), Positives = 188/452 (41%), Gaps = 32/452 (7%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI--DFDDLYYYAAPK 93
++E I IS+ +NEPDW+ ++R + + T+ I + + D K
Sbjct: 9 IDESHINEISSSRNEPDWLKDYRKDSLSIYSTLP------IEMSPLYNKYTDAKRLNPEK 62
Query: 94 SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+ + D + L + +LG E I+ ++LK
Sbjct: 63 ISIASSTKDTIPDFLQK---RLGELENEICIIQIGTN------------IHKINLPDDLK 107
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
G++ IS+AI + +LVKK L D+ + ALN+A F G F++IPK
Sbjct: 108 SKGLVISSISDAIQNNSELVKKAL-EASNSNDDKFTALNNAAFNSGVFIHIPKNFVLEKP 166
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ +++ G R +I ADE S S ++ +P+ + Q + ++ NAE+
Sbjct: 167 IHFLSCLSDDGLSTISRNVIFADESSKASIVQELYSPKTETQQAYLELLNTNVAANAELS 226
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+T+Q NF T+R D + ++W GS ++ L G +
Sbjct: 227 LTTLQ-------MMDQNSVNFSTRRTD-LAQDATVNWYSGLFGSVLSRYKIDYYLNGTGA 278
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ N Q D T M H + T +R+V K I S + ++G + + AA S
Sbjct: 279 SSNESEVVFGNNDQHFDIQTNMNHQSPATEARVVEKSILKNRSKSLFKGMIRIKENAAKS 338
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+F S+L+ N + IP +E + H A+ ++I +E +FY R + E A
Sbjct: 339 NSFLSGRSILLDKNAKSDAIPGLEILTNDVKATHSASVAQIDEEQIFYLKSRCLSHEEAE 398
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
IV GF+ + +K+ + LI+ E
Sbjct: 399 RTIVEGFLEPLSRKMSFQVRAWIAYLIESKWE 430
>gi|225154860|ref|ZP_03723358.1| FeS assembly protein SufD [Opitutaceae bacterium TAV2]
gi|224804390|gb|EEG22615.1| FeS assembly protein SufD [Opitutaceae bacterium TAV2]
Length = 447
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/421 (21%), Positives = 167/421 (39%), Gaps = 34/421 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W L+ + AY ++ P ++ + ++ L
Sbjct: 39 PAWWLDAKRAAYEQFQQTPFP--------------------GRTAETWRFSSTLNDAALT 78
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSV--SVVTTFKEELKKSGVIFMPISEAICE 168
++ +P + T K A + ++ + + +L GVI+ P+ EA+
Sbjct: 79 GFD---LPEDPAINIPNYSTIKHAAEIIYSNRQLVARSPLPADLAAKGVIYAPLDEALRN 135
Query: 169 HPDLVKKYLSTV-VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
H DLV+KY + +G + ALN+A G+ +Y+PKGV ++
Sbjct: 136 HSDLVQKYFQKLPANLGSEKFVALNTAFTAAGALLYVPKGVEIAAPFVLQHTLSGDNKAV 195
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F TL+I ++ + + +E + + L + V +L A A + Y Q W
Sbjct: 196 FPHTLVILEDQARATLVEFFVSAEAGARHLASGVNDLHAGPGAHLTYVGAQAWSQHTLAF 255
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ +++ + G L G + E ++ I++G Q
Sbjct: 256 QSN--------SIVAERDARVLSLNVHLGGKRARHESHSRLLGPGAHSEMLALTIASGAQ 307
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+ D T H A +T+S ++ K + + G + V A + + +L++ +
Sbjct: 308 EFDQRTLQTHAAPHTSSNLLYKNALLDTAKTIFSGLIIVEPDAQKTDAYQSNRNLMLSDT 367
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
A+++P +E + + H +TTS+I E FY RGI + A L+V GF EVL K
Sbjct: 368 AEANSLPGLEIEANDVRCTHGSTTSRIEPEQQFYLQARGIDPKNAHELLVFGFFEEVLGK 427
Query: 468 L 468
L
Sbjct: 428 L 428
>gi|90962854|ref|YP_536769.1| SufD protein [Lactobacillus salivarius UCC118]
gi|301300094|ref|ZP_07206310.1| FeS assembly protein SufD [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90822048|gb|ABE00686.1| SufD protein [Lactobacillus salivarius UCC118]
gi|300852268|gb|EFK79936.1| FeS assembly protein SufD [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 416
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 100/446 (22%), Positives = 176/446 (39%), Gaps = 45/446 (10%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
I + + EP+W R A + T K PS+ +I+Y + + + G +
Sbjct: 6 IDELIELRKEPEWFKAKRNEAKQLIETTKLPSFQKIKYHDWNIN----------VDGTTA 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+D+ A + S +E GVI
Sbjct: 56 IDNQPE-----------------------FDTNADVYQYASDKAQIKLPQEFLDKGVIVE 92
Query: 161 PISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
+A+ H D++KKY + + DN A + A G VY+PK V L+ +
Sbjct: 93 DFEDALVNHEDIMKKYFMEKGLKMDDNRLLAEHVANLQSGVLVYVPKNVDLETPLTCEYI 152
Query: 220 INEKGTGQFERT-LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
N + G + LI+ + S +SY+E N VVE++A D + I +++V
Sbjct: 153 QNSRVEGDYVHHVLIVTEANSSLSYVERLKTDGDKSN-TANIVVEVIAGDGSRIHFASVD 211
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
N ++ +RG + SKI W S +T L G+ S E
Sbjct: 212 NL-------SKNTTAYMNRRGYLQ-RDSKIDWAMGMMNSGLTIGDFDSDLVGDGSHAELK 263
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+ IS Q T++ ++ KNT I+ G++ S T+ G V + + S +
Sbjct: 264 VVGISTSDQIQGIDTRVTNIGKNTIGHILQHGVALDASELTFNGIGHVMKRSKGSDAQQE 323
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ P + ++ H A+ +++ E L+Y + RG+ + A L++
Sbjct: 324 SRILMLSPQARGDANPILLIDDNDVTAGHAASIGRVNPEQLYYLMSRGLQKRLAEKLVIR 383
Query: 459 GFVREVLQKLPM-EFAVEAQKLIDIS 483
GF+ VL ++P+ E E +LI+
Sbjct: 384 GFLAPVLDEIPLKEIRNEFSELIERK 409
>gi|253996497|ref|YP_003048561.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
gi|253983176|gb|ACT48034.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
Length = 442
Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats.
Identities = 89/423 (21%), Positives = 162/423 (38%), Gaps = 29/423 (6%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+L R A++R+ PS + D+ + G + D++ PE
Sbjct: 27 WVLATRKAAFKRFEAHGFPSRRE---EEWKYTDVSMISK----RGTLAPDNIPPEA---- 75
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKE-ELKKSGVIFMPISEAICEHPD 171
E ++LA +S+ VF + + +GV +++ + + +
Sbjct: 76 ------SSEAKLLAWSLSSERMHLMVFVNGHFDNGLSTLDDLPAGVQLSSLADMLEDGAE 129
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L K ++ALN+A TDG+ + I G+ + + GT + R
Sbjct: 130 LPKPLFQQ--QHEHTVFSALNNAFVTDGAVLNIAPGIVLDKPIYLLLIASGHGTAIYPRI 187
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+++A G+ + +E N A +L A I++ + P + G
Sbjct: 188 IVMAGAGTRATIIEHYMGTLDAHN-FTNATTQLNLDAGASIEHCKLTQEGPAAAHIAGIH 246
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
S + G + + L + + N Q +D
Sbjct: 247 AQL--------AEGSTFTSKSFVFGGRLVRNDITASLNEPNCTCNLDGLYLLNDKQHVDH 298
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T++ H A + TSR +G+ G S + GKV VH GA H+ +LL+ +
Sbjct: 299 HTRIDHRAASCTSREYYRGVLDGDSRGVFNGKVVVHAGANHTDANQTNHNLLLSRQAEIN 358
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT ++SDE LFY RG+ EE A ++++ GF +V++ + +
Sbjct: 359 TKPQLEIFADDVKCTHGATVGQLSDESLFYLRTRGLDEEVARSMLIYGFANDVIRSVDVP 418
Query: 472 FAV 474
+
Sbjct: 419 YLR 421
>gi|332878306|ref|ZP_08446032.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683757|gb|EGJ56628.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 433
Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 87/438 (19%), Positives = 156/438 (35%), Gaps = 38/438 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A + P + A + L +L T
Sbjct: 21 LKDIRKEALSFFAEKGFP---HKKIEAWKYTSLS-------------------KLQATDY 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS---GVIFMPISEAICEHP 170
L P+ E+ L+ + ++ + V V + E+ GV P+ EA+ +
Sbjct: 59 SLWQPVNEKATLSAEVLHEYSIKDCYSLVFVNGFYCAEMSSKEIAGVTITPLLEALHKGG 118
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-E 229
+ + + ALN+A ++G ++ +PKG + + + T +
Sbjct: 119 EAFISKYFNTTTEKGDVFTALNTAFASEGIYIEVPKGKVVDKPIQLLYFNDRGETTCYQP 178
Query: 230 RTLIIADEGSYVSYLE-GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R +I E + + +E L AV E+ A + Y +QN S
Sbjct: 179 RNIIAVGENAQLKVIEVHQNVSNTATAILTNAVTEIFVAKEAFLDYYKLQNDRLTASLID 238
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S S G +T + +GE ++I G Q
Sbjct: 239 NT--------YISQEANSHASVHTFSFGGELTRNNLNFYHQGEHLESTLKGLSILQGSQH 290
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D T + H N S K I + + N + GK+ V + A + + Q D++L+ +
Sbjct: 291 TDHYTLVNHAYPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKA 350
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ-- 466
+T P +E H T +S + LFY RGI ++ A AL+ F VL+
Sbjct: 351 TVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEASALLTYAFANTVLESV 410
Query: 467 KLPMEFAVEAQKLIDISL 484
K+P+ + ++I L
Sbjct: 411 KIPV-LSAYINRIIAEKL 427
>gi|300215446|gb|ADJ79859.1| SufD protein [Lactobacillus salivarius CECT 5713]
Length = 416
Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats.
Identities = 99/446 (22%), Positives = 176/446 (39%), Gaps = 45/446 (10%)
Query: 41 IRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
I + + EP+W R A + T K PS+ +I+Y + + + G +
Sbjct: 6 IDELIELRKEPEWFKAKRNEAKQLIETTKLPSFQKIKYHDWNIN----------VDGTTA 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+D+ A + S +E GVI
Sbjct: 56 IDNQPE-----------------------FDTNADVYQYASDKAQIKLPQEFLDKGVIVE 92
Query: 161 PISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
+A+ H D++KKY + + DN A + A G VY+PK V L+ +
Sbjct: 93 DFEDALVNHEDIMKKYFMEKGLKMDDNRLLAEHVANLQSGVLVYVPKNVDLETPLTCEYI 152
Query: 220 INEKGTGQFERT-LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
N + G + LI+ + S +SY+E N VVE++A + + I +++V
Sbjct: 153 QNSRVEGDYVHHVLIVTEANSSLSYVERLKTDGDKSN-TANIVVEVIAGNGSRIHFASVD 211
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
N ++ +RG + SKI W S +T L G+ S E
Sbjct: 212 NL-------SKNTTAYMNRRGYLQ-RDSKIDWAMGMMNSGLTIGDFDSDLVGDGSHAELK 263
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+ IS Q T++ ++ KNT I+ G++ S T+ G V + + S +
Sbjct: 264 VVGISTSDQIQGIDTRVTNIGKNTIGHILQHGVALDASELTFNGIGHVMKRSKGSDAQQE 323
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ P + ++ H A+ +++ E L+Y + RG+ + A L++
Sbjct: 324 SRILMLSPQARGDANPILLIDDNDVTAGHAASIGRVNPEQLYYLMSRGLQKRLAEKLVIR 383
Query: 459 GFVREVLQKLPM-EFAVEAQKLIDIS 483
GF+ VL ++P+ E E +LI+
Sbjct: 384 GFLAPVLDEIPLKEIRNEFSELIERK 409
>gi|55378572|ref|YP_136422.1| hypothetical protein rrnAC1828 [Haloarcula marismortui ATCC 43049]
gi|55231297|gb|AAV46716.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 403
Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats.
Identities = 111/452 (24%), Positives = 188/452 (41%), Gaps = 62/452 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLYYYAAPKS 94
L E + IS EP+W+LE R A + P R + D L Y +
Sbjct: 9 LTEAQVEQISDDLGEPEWLLETRKDALAALEELDMPDVIRTPGRTWTNLDALEYESLVDP 68
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ Q D VD E
Sbjct: 69 LDYAQDKDRVDAE----------------------------------------------- 81
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV + SEA+ +H DLVK++ + V ++ AL++A+F+ G+ VY+P+GV
Sbjct: 82 -GVEVLSWSEALADHEDLVKEHFGSTVDPQRDYLTALSTALFSAGTVVYVPEGVDAED-- 138
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA-PQRDENQLHAAVVELVALDNAEIK 273
R F TL++A+E S V+ LE D +Q ++ +VE+VA +NA ++
Sbjct: 139 -VKIRTTMNSQSLFNYTLVLAEESSSVTILERQQTGETTDADQYYSGIVEVVAEENAYVQ 197
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y +QN YNF KRG + ++W GS +T L G+ S
Sbjct: 198 YGALQNLSEE-------TYNFQVKRGHA-DTYATVNWIDGNIGSRLTKSNVETRLLGDSS 249
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ + Q D +++ H A++T + +V++G+ + + Y G V R A +
Sbjct: 250 ESQILGAFFGHEDQHFDIASRVWHEAEHTIADLVTRGVLDDDARSVYEGVQDVGREAWDT 309
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
++ + ++L++ ++ A P + N H AT ++ E +FY RG+ E+A
Sbjct: 310 SSYQRENTLMLSDDSEADASPKLIINNHDTEASHSATVGQVDAEDMFYMTSRGVDPESAK 369
Query: 454 ALIVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
++V GF VL+++ E + +LI L
Sbjct: 370 NMLVEGFFVPVLEEVEVDELREDLDQLIYERL 401
>gi|148360747|ref|YP_001251954.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296106188|ref|YP_003617888.1| ABC transporter, permease component [Legionella pneumophila 2300/99
Alcoy]
gi|148282520|gb|ABQ56608.1| ABC transporter, permease component [Legionella pneumophila str.
Corby]
gi|295648089|gb|ADG23936.1| ABC transporter, permease component [Legionella pneumophila 2300/99
Alcoy]
Length = 428
Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 164/435 (37%), Gaps = 36/435 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELLR 110
W+ + + A P+ + D L ++ P V P L
Sbjct: 21 WLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPD--------PTVKPALKT 72
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
++ + + L +Q ++ + + GV+ +P+S A+ +
Sbjct: 73 AFDDSPV-----KNLFLIQNGFISQEQEWIKNL----------PEGVLILPLSLALIHYA 117
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
DLVK YL +V ++ + LN+A+ G F+YIP G+ + ++ R
Sbjct: 118 DLVKPYLGKIVEQ-EHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMHLR 176
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+ ++ S + +E + + ++ E+ A++ + +Q +
Sbjct: 177 HLILMEKESQATLIEEYQG-EENICYFTNSITEVFLGAGAKLNHYKIQ-------KESKS 228
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
Y+ + S+ S L G + S ++ EQ+ I Q ID
Sbjct: 229 AYHLGHL-SVRQSAASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHID 287
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + HL N S KGI G S + GKV V + A H+ Q +LL+ N
Sbjct: 288 HHTVVHHLVPNCRSDQDYKGILKGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEI 347
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT ++ +E +FY RGI + A ++ F + L+ +P
Sbjct: 348 DTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPN 407
Query: 471 -EFAVEAQKLIDISL 484
+ A L+ L
Sbjct: 408 RDLADWMGNLLTQQL 422
>gi|329764692|ref|ZP_08256288.1| FeS assembly protein SufD [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138838|gb|EGG43078.1| FeS assembly protein SufD [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 465
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 100/445 (22%), Positives = 188/445 (42%), Gaps = 38/445 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS----WARIRYPAIDFDDLYYYAA 91
+N I+ IS +NEPDW+ ++R + + T+ + +D + + A
Sbjct: 8 INSSIVEEISTLRNEPDWLKQYRKNSLSIYETLPIETSPLYNKYTDAKKMDPQQVSF--A 65
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
P + IP Q+ L + + S ++
Sbjct: 66 PSTTNT-------------------IPKLLQKRL--HELENQTCIILIGSNIHKINISDD 104
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
LK G++ I++A+ +P+L+KK L ++ + ALN+A F G F++IP+ +
Sbjct: 105 LKSKGLVITSINDAVKNNPELIKKAL-EASNSKEDKFTALNNAAFNSGIFIHIPRNLVLE 163
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ +++ G R +I ADE S + ++ + + ++ Q + ++ NA+
Sbjct: 164 KPIHIVSCLSDDGISTIARNVIFADESSKATIVQELYSSKAEKQQAYLELLNTNVAPNAQ 223
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ +T+Q NF T+R D G +KI+W GS ++ L G
Sbjct: 224 LDVTTLQ-------MMDQSTVNFSTRRTD-LGQDAKINWYSGLFGSMLSRYKIEYFLNGT 275
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ + N Q D T + H + +T R+V K I S + ++G + + A
Sbjct: 276 GASANDSEVIFGNNEQSFDIQTNVNHESPSTEGRVVEKSILRNKSKSLFKGMIRIKEKAT 335
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
S +F S+L+ + + IP +E + H A+ ++I +E +FY R + +E
Sbjct: 336 KSNSFLSGRSILLDKDAKSDAIPGLEIFTNDVKATHSASVAQIDEEQIFYLKTRCLSKEE 395
Query: 452 AIALIVNGFVREVLQKLPMEFAVEA 476
A IV GF+ + +K M + V A
Sbjct: 396 AERTIVEGFLEPLSRK--MSYQVRA 418
>gi|163786784|ref|ZP_02181232.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
gi|159878644|gb|EDP72700.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
Length = 437
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 88/440 (20%), Positives = 166/440 (37%), Gaps = 37/440 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + T P+ + A + L V P+ + ++ + ++ Y
Sbjct: 26 DIRTEAIKTFETEGFPTKRQ---EAWKYTSLNSVLKHDYSVFPKHENALEFKDVKKYFIH 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI--CEHPDLV 173
I + + G +S + + G+ +S A+ ++ ++
Sbjct: 83 DIDSYKIIFIDGKYSSHL----------------SQTTHDGIDVCLMSAALTKPKYQLII 126
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERT 231
+ Y + + + A+LN+A ++G++++IPK + R
Sbjct: 127 ENYFNKIASK--DSLASLNTAFSSEGAYIHIPKNKLVDKPIQIIHFSTGNEAALMLQPRN 184
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L++ DE S+V +E + + L +V E+ A + Y +QN S
Sbjct: 185 LVVVDENSHVQIIERHQSLTDNP-VLTNSVTEIFTNKRAIVDYYKIQNDNENASLIDN-- 241
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+V ++ + S G + + GE+ I I Q +D
Sbjct: 242 -TYVNQKQESLAKVHTFS-----FGGKLIRNNLNFYQNGERIDSTMKGITIIGNKQHVDH 295
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H+ N S KGI + + GKV V + A + F +++LI + +
Sbjct: 296 NTLVHHIEPNCESHQDYKGIFDDGATGVFNGKVVVEKEAQKTNAFQANNNILISDKASIN 355
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLP 469
T P +E H T ++ + +FY RGIPE+ A AL++ F VL K+P
Sbjct: 356 TKPQLEIFADDVKCSHGCTIGQLDESAMFYLRSRGIPEKEARALLMFAFSNNVLDSVKIP 415
Query: 470 MEFAVEAQKLIDISLEGSVG 489
E K+I L +G
Sbjct: 416 -EIKNRITKIIANKLGVDIG 434
>gi|150026421|ref|YP_001297247.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
gi|149772962|emb|CAL44446.1| Fe-S assembly protein, SufD [Flavobacterium psychrophilum JIP02/86]
Length = 438
Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats.
Identities = 80/443 (18%), Positives = 157/443 (35%), Gaps = 42/443 (9%)
Query: 56 EWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
+ R A + + + P+ W I +D + ++ + + + +
Sbjct: 26 DVRSQAIKNFESKGFPTKKEEAWKYTSLNTILKNDFSVFPKKENTIEFKEVKKYFIHEID 85
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T++ + I L+ G+ +S A+ +
Sbjct: 86 TFKVVFIDGIFSSFLSSTS------------------------HDGLDVCLMSSALNKPK 121
Query: 171 DLVK-KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF- 228
++ + + +LN+A ++G+++ IPK + +
Sbjct: 122 YKIQIDEYFNKIASKEESLTSLNTAFASEGAYINIPKSKVVEKPIEIIYFSTGAEAALMV 181
Query: 229 -ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R L+I E ++V +E + + L +V E+ A A + Y VQN
Sbjct: 182 QPRNLVIVGENAHVQIMERHQSLNDNP-VLTNSVTEIFAQKRAVVDYYKVQNDVQTA--- 237
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
N + + S +S G IT + +GE+ + I Q
Sbjct: 238 -----NLIDNTYIAQKQESHVSVHTFSFGGNITRNNLNFYHQGERIYSTLKGVTIIGNKQ 292
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D T + H N S K I G S + GK+ V + A + F + +++L+
Sbjct: 293 HVDHYTLVQHATPNCESHQNYKTILDGSSTGVFNGKIFVEKEAQKTDAFQKNNNILLSEK 352
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+ P +E H T ++ + +FY QRGIP++ A AL++ F EV
Sbjct: 353 ATINAKPQLEIFADDVKCSHGCTIGQLDENAMFYMQQRGIPKKEAKALLMYAFTSEVTGS 412
Query: 468 LPM-EFAVEAQKLIDISLEGSVG 489
+ + E + ++I L +G
Sbjct: 413 IKIPELRSKIARIIADKLGVKMG 435
>gi|54293586|ref|YP_126001.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
gi|53753418|emb|CAH14871.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
Length = 428
Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 165/435 (37%), Gaps = 36/435 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELLR 110
W+ + + A P+ + D L ++ P V P L
Sbjct: 21 WLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPD--------PTVKPALKT 72
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
++ + + L +Q ++ + + GV+ +P+S A+ +
Sbjct: 73 AFDDSPV-----KNLFLIQNGFISQEQEWIKNL----------PEGVLILPLSLALINYA 117
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
DLVK YL +V ++ + LN+A+ G F+YIP G+ + ++ + R
Sbjct: 118 DLVKPYLGKIVEQ-EHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLR 176
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+ ++ S + +E + + ++ E+ A++ + +Q +
Sbjct: 177 HLILMEKESQATLIEEYQG-EENICYFTNSITEVFLGAGAKLNHYKIQ-------KESKS 228
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
Y+ + S+ S L G + S ++ EQ+ I Q ID
Sbjct: 229 AYHLGHL-SVRQSAASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHID 287
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + HL N S KGI G S + GKV V + A H+ Q +LL+ N
Sbjct: 288 HHTVVHHLVPNCRSDQDYKGILTGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEI 347
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT ++ +E +FY RGI + A ++ F + L+ +P
Sbjct: 348 DTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPN 407
Query: 471 -EFAVEAQKLIDISL 484
+ A L+ L
Sbjct: 408 RDLADWMGNLLTQQL 422
>gi|148654870|ref|YP_001275075.1| FeS assembly protein SufD [Roseiflexus sp. RS-1]
gi|148566980|gb|ABQ89125.1| FeS assembly protein SufD [Roseiflexus sp. RS-1]
Length = 405
Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats.
Identities = 91/454 (20%), Positives = 190/454 (41%), Gaps = 61/454 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
+++ ++ S EP+W+ E R+ A+R + + + P DL +
Sbjct: 12 ISDALVIERSRAAGEPEWLTEQRVDAWRFFASAEPP--------YWRRTDLSKF------ 57
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+++ + + ++ E+L
Sbjct: 58 --------KPEQVIAAADTAATSLYQE---------------------------EDLTDQ 82
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV+F +++AI H DL++++L + + + ALN+A++ DG F+Y+PK V + L+
Sbjct: 83 GVVFTTLAQAIHSHSDLIRRHLGAAIESKRHKFLALNAALWQDGVFLYVPKHVNVELPLT 142
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
F + G R LII D+G+ V+++E + + A V E+ ++A +++
Sbjct: 143 AMFSMPIPGGAIAPRNLIILDDGASVTFVEEYHSVAASDQAFAAPVTEMFLGNDATLRFV 202
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
VQ W +Y+ ++ G + + W + G+ + L G+ S
Sbjct: 203 AVQTWGED-------VYHIGAQK-VRAGRGASVEWAAVNLGARVQHIEAETALEGDGSRV 254
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
E+ + + Q + + + H+ T + + K + S T+ G + + + + +
Sbjct: 255 EWVAATFAADHQNLLTAPWLRHIGAKTEAHMDFKTVVKDQSYTTFDGMIKIEHQSRATVS 314
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L + + +IP + + H +T+ ++ +E LFY RGIP + AI
Sbjct: 315 RLEEHALHLSPKARSDSIPGLMIDTNDVARAGHASTSGEVDEEQLFYMRSRGIPRDEAIH 374
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
LIV GF VL ++P + ++ I +E +
Sbjct: 375 LIVMGFFEPVLDRIPNDA---LRQRIAEMIEAKI 405
>gi|307609399|emb|CBW98888.1| hypothetical protein LPW_06751 [Legionella pneumophila 130b]
Length = 428
Score = 253 bits (645), Expect = 7e-65, Method: Composition-based stats.
Identities = 91/435 (20%), Positives = 165/435 (37%), Gaps = 36/435 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELLR 110
W+ + + A P+ + D L ++ P V P L
Sbjct: 21 WLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPD--------PTVKPALKT 72
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
++ + + L +Q ++ + + GV+ +P+S A+ +
Sbjct: 73 VFDDSPV-----KNLFLIQNGFISQEQEWIKNL----------PEGVLILPLSLALINYA 117
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
DLVK YL +V ++ + LN+A+ G F+YIP G+ + ++ + R
Sbjct: 118 DLVKPYLGKIVEQ-EHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLR 176
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+ ++ S + +E + + ++ E+ A++ + +Q +
Sbjct: 177 HLILMEKESQATLIEEYQG-EENICYFTNSITEVFLGAGAKLNHYKIQ-------KESKS 228
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
Y+ + S+ S L G + S ++ EQ+ I Q ID
Sbjct: 229 AYHLGHL-SVRQSAASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHID 287
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + HL N S KGI G S + GKV V + A H+ Q +LL+ N
Sbjct: 288 HHTVVHHLVPNCRSDQDYKGILTGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEI 347
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT ++ +E +FY RGI + A ++ F + L+ +P
Sbjct: 348 DTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPN 407
Query: 471 -EFAVEAQKLIDISL 484
+ A L+ L
Sbjct: 408 RDLADWMGNLLTQQL 422
>gi|91216150|ref|ZP_01253118.1| FeS assembly protein SufD [Psychroflexus torquis ATCC 700755]
gi|91185667|gb|EAS72042.1| FeS assembly protein SufD [Psychroflexus torquis ATCC 700755]
Length = 437
Score = 253 bits (645), Expect = 7e-65, Method: Composition-based stats.
Identities = 97/438 (22%), Positives = 174/438 (39%), Gaps = 37/438 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + + + P+ + A + L + P+ D +D + ++ Y I
Sbjct: 28 RNKAIKFFESTGFPT---KKMEAWKYTSLNSVLKEDYSIFPKKEDAIDYKDIKKYLIHDI 84
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLVKK 175
+ V +D ++ S TT + + +S A+ + + ++ K
Sbjct: 85 D----------TYTIVFIDGIYSSHLSRTTHDK------LDACLMSSALNKSKYKPIMDK 128
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTLI 233
Y + +VP + ++LN+A +G+++ IPK V + + R LI
Sbjct: 129 YFNKIVP--EESMSSLNTAFAKEGAYIRIPKNVSAEKPIQILNFSTGNESALMIQPRNLI 186
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA+EG++V +E + + L +V E+ NAE+ Y +QN +
Sbjct: 187 IAEEGAHVQIIERHQSLTDNP-VLTNSVTEVYVGKNAEVDYYKIQN--------DKTTSS 237
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + S S G IT GE + I G Q +D T
Sbjct: 238 LIDNTFIKQERDSTCSLHTFSLGGKITRNNLRFYQHGENCNSILKGVTILEGKQHVDHNT 297
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+ N S KGI + S + G + V R A + F +++L+ + ++
Sbjct: 298 LVHHIEPNCESHQDYKGIFSEKSVGVFNGSILVDRLAQKTNAFQSNNNILLDDGATCNSK 357
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLPME 471
P +E H T ++ +E L+Y RGIP++ A AL++ F +VL K+P E
Sbjct: 358 PQLEIFADDVKCSHGCTIGQLDNEALYYLRTRGIPKKEARALLMFAFANKVLGSVKIP-E 416
Query: 472 FAVEAQKLIDISLEGSVG 489
K I + LE +G
Sbjct: 417 IKKRITKQIALKLEVELG 434
>gi|52840840|ref|YP_094639.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296623|ref|YP_122992.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
gi|52627951|gb|AAU26692.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750408|emb|CAH11802.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
Length = 428
Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats.
Identities = 89/435 (20%), Positives = 166/435 (38%), Gaps = 36/435 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELLR 110
W+ + + A P+ + D L ++ P V P L
Sbjct: 21 WLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVPPD--------PTVKPALKT 72
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
++ + + L +Q ++ + + GV+ +P+S A+ +
Sbjct: 73 AFDDSPV-----KNLFLIQNGFISQEQEWIKNL----------PQGVLILPLSLALIHYA 117
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
DLVK +L ++ ++ + LN+A+ G F+YIP+G+ + ++ + R
Sbjct: 118 DLVKPHLGKIMEQ-EHGFHYLNTAMLQCGVFIYIPEGICLEEPIVLKHIQDQTNQAMYLR 176
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+ ++ S + +E + + ++ E+ A++ + +Q +
Sbjct: 177 HLILMEKESQATLIEEYHG-EENICYFTNSITEVFLGAGAKLNHYKIQ-------KESKS 228
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
Y+ + S+ S L G + S ++ EQ+ I Q ID
Sbjct: 229 AYHLGHL-SVRQSAASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHID 287
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + HL N S KGI G S + GKV V + A H+ Q +LL+ N
Sbjct: 288 HHTVVHHLVPNCRSDQDYKGILKGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEI 347
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT ++ +E +FY RGI + A ++ F + L+ +P
Sbjct: 348 DTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPN 407
Query: 471 -EFAVEAQKLIDISL 484
+ A L+ L
Sbjct: 408 RDLADWMGNLLTQQL 422
>gi|300711791|ref|YP_003737605.1| SufBD protein [Halalkalicoccus jeotgali B3]
gi|299125474|gb|ADJ15813.1| SufBD protein [Halalkalicoccus jeotgali B3]
Length = 404
Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats.
Identities = 106/457 (23%), Positives = 200/457 (43%), Gaps = 70/457 (15%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLYYYAAPKS 94
++E+ + IS K +EP+W+L+ RL A +++ PS + + +DL
Sbjct: 9 ISEETVEKISEKLDEPEWLLDARLEALEALDSLELPSVIQTPGRRWTNLEDL-------- 60
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+E L P+ E K+++
Sbjct: 61 ----------------DFEALVDPLDAAEE------------------------KDQVGP 80
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
V +P +EA EH DLV+++ +++ +N+ AL++A+FT G+ VY+P+ V
Sbjct: 81 DDVEVLPFAEAAREHEDLVREHFGSIIDPEENYLTALSTALFTTGTVVYVPRNVDAED-- 138
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN---QLHAAVVELVALDNAE 271
R F TL++ ++ S V+ LE + + E+ + ++ +VE+ A +N+
Sbjct: 139 -VTIRTTMNSGSLFNYTLVVTEQSSSVTILERQSTGESVESEEGRYYSGIVEIAAGENSH 197
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
++Y ++Q+ YN+ T + S ISW + GS +T L GE
Sbjct: 198 VQYGSLQDLDEE-------TYNY-TLKHGVTDQYSTISWIEGNLGSRLTKSGVETTLSGE 249
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
S + + Q D +++ H A++TT+ +V++G+ S + Y G V A
Sbjct: 250 GSETKIVGAFFGHDDQHFDINSRVWHRAEHTTADLVTRGVLDDRSRSVYEGVQDVGSEAW 309
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ ++ + ++L++ + A P + N H AT ++ E LFY + RG+ ++
Sbjct: 310 DTNSYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQVDKEDLFYMISRGVDPQS 369
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
A ++V GF VL ++ E +L LEG +
Sbjct: 370 ARNMLVEGFFVPVLDEI------EVDEL-REDLEGRI 399
>gi|88811717|ref|ZP_01126971.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
gi|88791108|gb|EAR22221.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
Length = 443
Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats.
Identities = 104/452 (23%), Positives = 174/452 (38%), Gaps = 36/452 (7%)
Query: 45 SAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDV 104
SA ++ P+W+ R + P + A DL +
Sbjct: 19 SAHQDAPEWLARLRQHGIECFEAQGFP---GRKVEAWRKTDLTPVLREHFVPASGPG--- 72
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
++G + E+ + G V VD FD + +G+ P+SE
Sbjct: 73 ---------QMGPELLEKVGVLGQVHRLVFVDGWFDPGLSDV----DKLPNGLTLAPLSE 119
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INE 222
P ++++ L V + + ALN+A F DG+ +++ +G +
Sbjct: 120 YGERLPAVIQEALGGFVDTETHPFTALNTAFFRDGAIMHVARGATVEQPVVVVHLLTPEA 179
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
+ RT+++A+E S V+ +E + L+ V E+VA A + Y VQ
Sbjct: 180 DRRAVYPRTVLVAEEASQVTLIEQFVG-ADEPFALNCPVTEIVARQGANVDYYKVQEEGA 238
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
G + G + T R + + L G+ + L G + + +
Sbjct: 239 GSAHL--GAVHAETFR------DATVHIHSLACGAKLARTDIYANLIGPGADVTLNGLYL 290
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ G Q D T + H A++ TSR V KG+ G S + G V V A Q +L
Sbjct: 291 TTGRQYCDHHTWVNHKAEHGTSRQVFKGVLQGRSETVFDGLVKVFERAQKIDAQQQNRNL 350
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
L+G AH+ P +E H +T K+ DE LFY RGI + A L+ F
Sbjct: 351 LLGKLALAHSNPRLEIHADDVKCSHGSTVGKLDDEALFYLNTRGIGLDEAQGLLTFAFAA 410
Query: 463 EVLQKLPME--FAVE----AQKLIDISLEGSV 488
E+L+ + ++ + E Q+L L G V
Sbjct: 411 EMLKPIRLDRLYQYERQLLLQRLPGAELTGEV 442
>gi|254556393|ref|YP_003062810.1| ABC transporter component (putative) [Lactobacillus plantarum JDM1]
gi|254045320|gb|ACT62113.1| ABC transporter component (putative) [Lactobacillus plantarum JDM1]
Length = 433
Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats.
Identities = 88/445 (19%), Positives = 163/445 (36%), Gaps = 36/445 (8%)
Query: 47 KKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
+ EP W++E RL A + P R P S D
Sbjct: 20 EHGEPHWLVERRLAALDAMQGLAVPKADRFSIRDWPLT-------PTDQPLKFSRSDRTL 72
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
T E I I +V +EL GVI + A
Sbjct: 73 ATDVTAEAGHIQI-----------------VQVGQTTVTVNLPDELDDQGVILTDMFTAF 115
Query: 167 CEHPDLV-KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KG 224
EHP L K ++ VV ++ + ++A G F+Y+PKGV + + +
Sbjct: 116 REHPQLTEKHFMGKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTRV 175
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
LI+A++ S+ + + T +N + VVE++A ++E+ +S
Sbjct: 176 QPLISHVLIVAEQDSHFAVTQHLTTKGDVDN-IANCVVEILARADSEVHFSAFDELGA-- 232
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++ +R +K+ W + T+ L GE + + I ++
Sbjct: 233 -----NTTAYLNRR-AAISRGAKVDWAIGMMNNGNTFGDFDSELIGEGAKSDAKVITVTT 286
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q + T++ + K T IV +G+ SN + G + GA+ + + L++
Sbjct: 287 KAQDVCVNTRVTNRGKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMM 346
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
++ P + + H A+ +I ++Y + RGI + A L++ GF+ V
Sbjct: 347 SDDAHGDANPILLIDENDVLAGHAASVGQIDQNQMYYLMSRGIDKPQAQRLVIRGFLSTV 406
Query: 465 LQKLPMEFAV-EAQKLIDISLEGSV 488
+ +P + I+ LE +
Sbjct: 407 IGAIPSKIVRTRLTNTIERKLEDGI 431
>gi|325911688|ref|ZP_08174095.1| FeS assembly protein SufD [Lactobacillus iners UPII 143-D]
gi|325476454|gb|EGC79613.1| FeS assembly protein SufD [Lactobacillus iners UPII 143-D]
Length = 432
Score = 252 bits (644), Expect = 9e-65, Method: Composition-based stats.
Identities = 93/447 (20%), Positives = 181/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ + +K GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NLPPKYQKQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ E+P+++KKY T V+ V ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ + T LI+A + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSRSETSFNPHLLIVAGKNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|284046833|ref|YP_003397173.1| FeS assembly protein SufD [Conexibacter woesei DSM 14684]
gi|283951054|gb|ADB53798.1| FeS assembly protein SufD [Conexibacter woesei DSM 14684]
Length = 420
Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats.
Identities = 112/445 (25%), Positives = 182/445 (40%), Gaps = 32/445 (7%)
Query: 45 SAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDV 104
SA +P W+ E R A + P++ P +F D+
Sbjct: 3 SATIEQPSWLAERRARAAGLTERLDLPTYKGR--PGWEFTDISSLDLAAYAAAGDGDAGA 60
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
+ L PI ++ A V V E GV+ +
Sbjct: 61 VARADALFVGLEQPIVVTQVDATT-------------VEVSGELPE-----GVVVTTLER 102
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A EHP+LV+++L T+V D F A N A F G FV++P+G P + +
Sbjct: 103 AAAEHPELVERHLGTIVAGEDAFVA-RNEAGFAGGLFVHVPRGTIVPRPVLVTVVQDADR 161
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
T R+LI+ ++G E + + L VVELV +NA +++ QN
Sbjct: 162 TALNWRSLIVVEDGGQAEVWEQYLSADAERETLLNTVVELVVGENANLRFVNGQNLSEKS 221
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ F T+R + G + W L GSA L G+ + G S+
Sbjct: 222 -------WIFGTQRSEV-GRDGALDWVSLGFGSARGKVRMETKLAGKGADGRVTGAYASH 273
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q +D T H A +TTS + +G+ G S +RG + V GA + F + +LL+
Sbjct: 274 KRQHVDFDTTQEHAAPHTTSDLAFRGVLQGRSEAVWRGNIIVDPGAQQTDAFQESRNLLL 333
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
A IP +E + + H A ++I E LFY RG+ + A L++ GF+ E+
Sbjct: 334 SKRAHADAIPGLEIQANDVRCTHAAAIAQIDPEQLFYLKSRGLRPDVAKRLVIEGFLAEL 393
Query: 465 LQKLPMEFAVEAQKLIDISLEGSVG 489
+++ E V ++++ +LE +G
Sbjct: 394 VERFE-EGPV--RQVLGDALERRLG 415
>gi|329901919|ref|ZP_08272987.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
gi|327548918|gb|EGF33540.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
Length = 440
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 93/441 (21%), Positives = 162/441 (36%), Gaps = 36/441 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W R R+ + P+ R F DL +A + P P L
Sbjct: 20 PSWTGALRARGAARFALLARPT---TRDEEWRFTDLSPFAQTAFVAAPG--SKTSPLTLA 74
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
L + QT V VD ++ + + L + + A H
Sbjct: 75 DIAGLTVDEA--------QTRLVFVDGIYAPALSIRQDDDHL-----VVADLQTAPARHA 121
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
++ +L + ++AA N+A + + V +P+ + F +K F R
Sbjct: 122 HTIEAHLGRHASIDTAYFAAQNTASIENAAVVIVPRDSAITAPVHLLFIGTQKDVLGFPR 181
Query: 231 TLIIADEGSYVSYLE--------GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
LI+A+ GS V+ LE G V E+ D+A + + +Q
Sbjct: 182 ALIVAEPGSSVTVLEDYVVLNPPGGQEEAHLATYFTNTVTEIALADSARVNHIRLQREGN 241
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
V S+ + + G+ I+ + GE++ +A+
Sbjct: 242 RALH--------VGLCAVSLARASEYTSVSVAFGARISRVNVEVVHHGERAACTLDGLAM 293
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+G Q D+ T + H + SR + K I+ G ++ + GKV V A +L
Sbjct: 294 IDGRQLADTHTFVDHAKPHGISRQLHKCIAGGSAHAVFNGKVMVRPDAQKIDARQSNRNL 353
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
L+ T P +E S H AT ++ + +FY RG+ E AA L+ F
Sbjct: 354 LLSGKAHIDTKPQLEIFASDVKCTHGATVGQLDHDEVFYLQSRGLDEVAARNLLTYAFGA 413
Query: 463 EVLQKLPMEFAVE--AQKLID 481
E++ ++P++ AQK++D
Sbjct: 414 EIVDRIPIDSVKRQLAQKVLD 434
>gi|309803290|ref|ZP_07697387.1| FeS assembly protein SufD [Lactobacillus iners LactinV 11V1-d]
gi|312874640|ref|ZP_07734664.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2053A-b]
gi|315653689|ref|ZP_07906609.1| FeS assembly protein SufD [Lactobacillus iners ATCC 55195]
gi|308164798|gb|EFO67048.1| FeS assembly protein SufD [Lactobacillus iners LactinV 11V1-d]
gi|311089870|gb|EFQ48290.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2053A-b]
gi|315489051|gb|EFU78693.1| FeS assembly protein SufD [Lactobacillus iners ATCC 55195]
Length = 432
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 183/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ F ++ ++ GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NFPKKYQEQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ ++P+++KKY T V+ + ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKKYPEMIKKYFMTEVIKMDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ K T LI+A + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|326334712|ref|ZP_08200919.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693162|gb|EGD35094.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 433
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 83/434 (19%), Positives = 152/434 (35%), Gaps = 30/434 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A+ + P+ + A ++ L A P +T
Sbjct: 21 LKDIRKEAFSFFAEKGFPN---KKVEAWEYTSLTELQATD-------YHLWQPVNKKT-- 68
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+P + V V+ + S +GV + EA+ + +
Sbjct: 69 -TLLPEVLYKYAIADCYQLVFVNGYYSSEMSSKEL------TGVTVTSLLEALHKGGEAF 121
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-ERTL 232
+ + + A+N+A ++G ++ +PKG + + + K T + R +
Sbjct: 122 IQKYFNANTEKGDIFTAINTAFASEGVYIEVPKGKVVEKPIQLLYFNDRKETTCYQPRNI 181
Query: 233 IIADEGSYVSYLE-GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
I+ E + + +E L AV E+ NA + Y +QN S
Sbjct: 182 IVVGENAQLKVIEMHQNLSDAATAILTNAVTEVFVAKNAFLDYYKLQNDSLTASLIDNT- 240
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ S + G +T + +GE ++I G Q D
Sbjct: 241 -------YISQEANSHANVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQHTDH 293
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H N S K I + N + GK+ V + A + + Q D++L+ + +
Sbjct: 294 YTLVNHAHPNCESHQDYKSIVNEEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKATVY 353
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H T +S + LFY RGI ++ A AL+ F VL+ + +
Sbjct: 354 TKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEAAALLTYAFANTVLESVKIP 413
Query: 472 FAVE-AQKLIDISL 484
E +I L
Sbjct: 414 ALSEYINAIIAEKL 427
>gi|309807877|ref|ZP_07701808.1| FeS assembly protein SufD [Lactobacillus iners LactinV 01V1-a]
gi|308168857|gb|EFO70944.1| FeS assembly protein SufD [Lactobacillus iners LactinV 01V1-a]
Length = 432
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 94/447 (21%), Positives = 181/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ + +K GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NLPPKYQKQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ E+P+++KKY T V+ V ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ K T LI+A + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|309804781|ref|ZP_07698845.1| FeS assembly protein SufD [Lactobacillus iners LactinV 09V1-c]
gi|312873201|ref|ZP_07733257.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2052A-d]
gi|308165891|gb|EFO68110.1| FeS assembly protein SufD [Lactobacillus iners LactinV 09V1-c]
gi|311091212|gb|EFQ49600.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2052A-d]
Length = 432
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 93/447 (20%), Positives = 181/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ + +K GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NLPPKYQKQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ E+P+++KKY T V+ V ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ + T LI+A + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSRSETSFNPHLLIVAGKNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|308180366|ref|YP_003924494.1| ABC transporter component (putative) [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308045857|gb|ADN98400.1| ABC transporter component (putative) [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 433
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 88/445 (19%), Positives = 163/445 (36%), Gaps = 36/445 (8%)
Query: 47 KKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
+ EP W++E RL A + P R P S D
Sbjct: 20 EHGEPHWLVERRLAALDAMQGLAVPKADRFSIRDWPLT-------PTDQPLKFSRSDRTL 72
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
T E I I +V +EL GVI + A
Sbjct: 73 ATDVTAEAGHIQI-----------------VQVGQTTVTVNLPDELDDQGVILTDMFTAF 115
Query: 167 CEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KG 224
EHP L +K+ VV ++ + ++A G F+Y+PKGV + + +
Sbjct: 116 REHPQLTEKHFMDKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTRV 175
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
LI+A++ S+ + + T +N + VVE++A ++E+ +S
Sbjct: 176 QPLISHVLIVAEQDSHFAVTQHLTTKGDVDN-IANCVVEILARADSEVHFSAFDELGA-- 232
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++ +R +K+ W + T+ L GE + + I ++
Sbjct: 233 -----NTTAYLNRR-AAISRGAKVDWAIGMMNNGNTFGDFDSELIGEGAKSDAKVITVTT 286
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q + T++ + K T IV +G+ SN + G + GA+ + + L++
Sbjct: 287 KAQDVCVNTRVTNRGKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMM 346
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
++ P + + H A+ +I ++Y + RGI + A L++ GF+ V
Sbjct: 347 SDDAHGDANPILLIDENDVLAGHAASVGQIDQNQMYYLMSRGIDKPQAQRLVIRGFLSTV 406
Query: 465 LQKLPMEFAV-EAQKLIDISLEGSV 488
+ +P + I+ LE +
Sbjct: 407 IGAIPSKTVRTRLTNTIERKLEDGI 431
>gi|312871610|ref|ZP_07731702.1| FeS assembly protein SufD [Lactobacillus iners LEAF 3008A-a]
gi|325913029|ref|ZP_08175402.1| FeS assembly protein SufD [Lactobacillus iners UPII 60-B]
gi|329921113|ref|ZP_08277636.1| FeS assembly protein SufD [Lactobacillus iners SPIN 1401G]
gi|311092835|gb|EFQ51187.1| FeS assembly protein SufD [Lactobacillus iners LEAF 3008A-a]
gi|325477709|gb|EGC80848.1| FeS assembly protein SufD [Lactobacillus iners UPII 60-B]
gi|328935020|gb|EGG31509.1| FeS assembly protein SufD [Lactobacillus iners SPIN 1401G]
Length = 432
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 183/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ F ++ ++ GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NFPKKYQEQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ ++P+++KKY T V+ + ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKKYPEMIKKYFMTEVIKMNEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ K T LI+A + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|88801810|ref|ZP_01117338.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
gi|88782468|gb|EAR13645.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
Length = 437
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 91/443 (20%), Positives = 164/443 (37%), Gaps = 43/443 (9%)
Query: 56 EWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
E R A++ + + P+ W +I D + ++ + + +
Sbjct: 26 EIRSKAFQNFEGLGFPTKKLEAWKYTSLNSILKQDYSLFPNKENSIQLADVQKYFIHDID 85
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
TY+ + I + L+ V M + A ++
Sbjct: 86 TYKLVFIDGKYSSFLSETTHDT----------------------FDVCLMSSALAKPKYK 123
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-- 228
+++ Y + + + +LN+A +G+++YIP+ V +
Sbjct: 124 AVIENYFNKIARK--DNLTSLNTAFANEGAYIYIPRNVEVEKPIQIINFTTGSEAATMLQ 181
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R LI+ ++ ++V +E + L AV E+ A +A + +QN + S
Sbjct: 182 PRNLIVVEQNAHVQIIERHQSLT-SNPVLTNAVTEIFAAKDATVDIYKIQNDHKTASLID 240
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S +S G IT + RGE I I G Q
Sbjct: 241 NS--------YIEQKSNSVVSVHTFSFGGNITRNNLNFYQRGEHIDSILKGITIIEGKQH 292
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D T + H+ N S KGI S + GKV V++ A + + + +++L+ +
Sbjct: 293 VDHHTMVQHIEPNCESHQDYKGIFDERSTGVFNGKVIVNKEAQKTNAYQKNNNILVSDRA 352
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ-- 466
+ P +E H T ++ DE LFY QRGIPE+ AL++ F VL+
Sbjct: 353 TINAKPQLEIFADDVKCSHGCTIGQLDDEALFYMQQRGIPEKEGKALLMFAFANTVLESV 412
Query: 467 KLPMEFAVEAQKLIDISLEGSVG 489
K+P E K+I L +G
Sbjct: 413 KIP-EVKQRIAKIIANKLNVKMG 434
>gi|312871908|ref|ZP_07731990.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2062A-h1]
gi|311092485|gb|EFQ50847.1| FeS assembly protein SufD [Lactobacillus iners LEAF 2062A-h1]
Length = 432
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 91/447 (20%), Positives = 182/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ ++ ++ GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NLPKKYQEQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ ++P+++KKY T V+ + ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKKYPEMIKKYFMTEVIKMDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ K T LI+A + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSKSETSFNPHLLIVAGQNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|309809983|ref|ZP_07703831.1| FeS assembly protein SufD [Lactobacillus iners SPIN 2503V10-D]
gi|308169771|gb|EFO71816.1| FeS assembly protein SufD [Lactobacillus iners SPIN 2503V10-D]
Length = 432
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 182/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ ++ ++ GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NLPQKYQEQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ E+P+++KKY T V+ V ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ + T LI+A + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSRSETSFNPHLLIVAGQNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|222478612|ref|YP_002564849.1| SufBD protein [Halorubrum lacusprofundi ATCC 49239]
gi|222451514|gb|ACM55779.1| SufBD protein [Halorubrum lacusprofundi ATCC 49239]
Length = 404
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 109/453 (24%), Positives = 194/453 (42%), Gaps = 62/453 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLYYYAAPKS 94
L+ED +R I+ +++EP+W+LE RL A T P + D + L
Sbjct: 9 LSEDTVRRIAEERDEPEWLLETRLNALSALETADLPDVIQTPGRRWTDLEAL-------- 60
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+E L P+ + + T +
Sbjct: 61 ----------------DFEALVDPLNQSD-----------------------TTERSAGD 81
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
V+ +P SEA E+ D+++ +V+ N+ AL+ A+FT G+FVY+P+GV
Sbjct: 82 DDVVILPFSEAFDEYGDIIEANFGSVLDPEHNYLTALSVALFTTGTFVYVPEGVDVED-- 139
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR--DENQLHAAVVELVALDNAEI 272
R F +TL++A+E S V+ LE + D ++ + +VE+VA +NA +
Sbjct: 140 -VTVRAEMNSRSLFSQTLVVAEESSSVTILESIESGDDGVDGDRYFSNLVEIVAGENANV 198
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
++ ++QN Y + KRG + + W + GS +T L G+
Sbjct: 199 QFGSLQNLDDDS-------YTYSLKRGVT-DTYATVDWIESNFGSKLTRSDVETELNGDG 250
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
S + Q D ++ H A++TT+ +V++G+ S + Y G V A +
Sbjct: 251 SESQIVGTFFGTEDQHFDINARVWHQAEHTTADLVTRGVLDDVSRSVYEGVQDVGEDAWN 310
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ ++ + ++L++ ++ A P + N H AT ++ E LFY R I A
Sbjct: 311 TSSYQRENTLMLSDDAEADASPKLIIHNHDTEASHSATVGQVDAEDLFYLESRTIDPLTA 370
Query: 453 IALIVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
++V GF VL+++ EF + Q+L+ L
Sbjct: 371 RNMLVEGFFVPVLEEIAVDEFRDDVQELVLQRL 403
>gi|259501626|ref|ZP_05744528.1| FeS assembly protein SufD [Lactobacillus iners DSM 13335]
gi|302191167|ref|ZP_07267421.1| hypothetical protein LineA_04087 [Lactobacillus iners AB-1]
gi|259166911|gb|EEW51406.1| FeS assembly protein SufD [Lactobacillus iners DSM 13335]
Length = 432
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 181/447 (40%), Gaps = 40/447 (8%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLT-MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
R ++ EP W +E RL A + L + P R ++ F ++
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPQMQRFKFDNWPF-----FSK--------- 55
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D+D ++ + EK + E +L QT+ ++ +K GVIF
Sbjct: 56 -HDIDLQIAESIEKNAVTTNEFNVLQIGQTTCSL------------NLPQKYQKQGVIFT 102
Query: 161 PISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
I A+ E+P+++KKY T V+ V ++ A + A G F+Y+PK V + +
Sbjct: 103 DIFTALKEYPEMIKKYFMTEVIKVDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLV 162
Query: 220 INEKG-TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ + T LI+ + S + +++ N ++ AV E+ A D + +++S++
Sbjct: 163 QDSRSETSFNPHLLIVVGQNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL- 220
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+ + KR + + + W T L G+ S
Sbjct: 221 ------EEIGKNTTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSK 273
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+IA++ Q + ++++ ++T I +G+ S + G + GA S+ Q
Sbjct: 274 AIAVTTDKQHVGINNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQ 333
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
L++ +N P + + H A+ + + Y + RGIP + A L++
Sbjct: 334 NRILMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIR 393
Query: 459 GFVREVLQKLP-MEFAVEAQKLIDISL 484
GF+ VL +P ++ E +++ L
Sbjct: 394 GFLGAVLDAIPAVDVRHEMINILERKL 420
>gi|11496556|ref|NP_044570.1| putative ABC transporter [Toxoplasma gondii RH]
gi|5231259|gb|AAD41153.1|U87145_22 ycf24 homolog [Toxoplasma gondii]
Length = 465
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 175/468 (37%), Positives = 265/468 (56%), Gaps = 21/468 (4%)
Query: 19 YKY---GFETNIQVDKAPK---GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPS 72
YKY + N + + GLN +++ + K++ ++ +RL A K P
Sbjct: 4 YKYLYNKYNNNTDLFNTVRLIGGLNINMVNKLIFKQDNFIFLYIFRLNALSILNKFKQPD 63
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W P FDD+ YY+ P ++ ++ + KLG+ ++ E L
Sbjct: 64 WCFYELPEFAFDDISYYSIPLNVYTNKN------KYKSILSKLGLELKFSENLI------ 111
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
+D +FDSV ++ L K G+ F+ ++I +P L+ YL ++V DNF+ +N
Sbjct: 112 --LDVIFDSVLLLNLTTFFLIKMGLFFLSFFQSIIFYPYLIFSYLGSIVSNTDNFFLTIN 169
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
S +F +GSF ++ K + + L+TYFR + + QFERTLI+ E S + Y EGC+AP
Sbjct: 170 SIIFNEGSFCFVMKDLNSNINLTTYFRTHSENFAQFERTLIVLSENSKLIYFEGCSAPMF 229
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
E+QLH A+VEL A +KYST+QNWY G+ G+GG+YNF TKRG C S ++W Q
Sbjct: 230 LESQLHIAIVELFIKTKANLKYSTIQNWYRGNQLGEGGLYNFTTKRGFCMDK-SFLNWIQ 288
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
+E GS ITWKYPS L G +S F+S+A+ + +Q D+GTKMLH+ KNT S I+SK +S
Sbjct: 289 IEIGSVITWKYPSTYLIGNKSFSNFFSLAMLSDYQVSDTGTKMLHIGKNTKSFILSKSLS 348
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
FS TYRG V++ + A +S N+T+C+SLLIG N TIPY N S + EAT S
Sbjct: 349 FNFSFYTYRGLVTIFKTALNSYNYTECNSLLIGCNAFTATIPYTIINNFSAYINQEATIS 408
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
K+ + LF+ L RG+ ++ + +++ G+ + K+ E +E LI
Sbjct: 409 KLELDFLFFLLHRGLNLKSTLMILIYGYCYNICSKISFELELEVPLLI 456
>gi|332292133|ref|YP_004430742.1| FeS assembly protein SufD [Krokinobacter diaphorus 4H-3-7-5]
gi|332170219|gb|AEE19474.1| FeS assembly protein SufD [Krokinobacter diaphorus 4H-3-7-5]
Length = 437
Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats.
Identities = 91/440 (20%), Positives = 160/440 (36%), Gaps = 37/440 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + P+ + + L + P +D + ++ Y
Sbjct: 26 DIRNEAIKTFEAEGFPT---KKLENWKYTSLNSILKEDYNIFPSKEAALDFKDVKQYFLN 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI--CEHPDLV 173
+ + + G V ++F E G+ + A+ ++ ++
Sbjct: 83 DVDTYKIVFVDG----------------VYSSFLSETTHDGIDVCTMGAALSKPKYKQVI 126
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERT 231
Y + + +LN+A DG+++YIPKG + R
Sbjct: 127 DVYFNKIAKGE--SMDSLNTAFAKDGAYIYIPKGKVAQKPIQIVHFATGANEAMMLQPRN 184
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+A+E S V +E + + L V E+ A A + Y +QN S
Sbjct: 185 LIVAEENSEVQIIERHQSLTDKK-VLTNVVTEIFADKRALVDYYKIQNDNLSAS------ 237
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V + S +S G IT + +GE I I G Q +D
Sbjct: 238 --LVDTTEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGITIIEGKQHVDH 295
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H+ N S KGI A S + GKV V + A + + +++L+ + +
Sbjct: 296 NTLVHHITPNCESHQDYKGIFADKSVGVFNGKVVVEKEAQKTNAYQSNNNILLDDTATIN 355
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLP 469
+ P +E H T ++ + LFY RGI E+ AL++ F VL K+P
Sbjct: 356 SKPQLEIFADDVRCSHGCTIGQLDESALFYLQSRGIGEKEGRALLMYAFANTVLSSVKIP 415
Query: 470 MEFAVEAQKLIDISLEGSVG 489
+ KLI + ++G
Sbjct: 416 -QLKERITKLIAKKIGVNIG 434
>gi|256820069|ref|YP_003141348.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
gi|256581652|gb|ACU92787.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
Length = 433
Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 152/437 (34%), Gaps = 36/437 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A + P + A + L L T
Sbjct: 21 LKDIRKEALSFFAEKGFP---HKKVEAWKYTSLS-------------------NLQATDY 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS---GVIFMPISEAICEHP 170
L PI + L+ K + + V V + E+ G P+ EA+ +
Sbjct: 59 SLWQPIHNKTTLSPEVLHKYVIADCYVLVFVNGYYSPEMSSKEIAGATITPLLEALHKGG 118
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFE 229
+ K + + ALN+A ++G ++ +PK + YF ++ T
Sbjct: 119 EAFIKKYFNANTEKGDVFTALNTAFASEGIYIEVPKAKVVDKPIQLLYFNDRKEPTCYQP 178
Query: 230 RTLIIADEGSYVSYLE-GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R +I E + + +E L AV E+ +A + Y +QN S
Sbjct: 179 RNIIAVGENAQLKVIEVHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDRLTASLID 238
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S S G +T + +GE ++I G Q
Sbjct: 239 NT--------YISQEANSHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKGTQH 290
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D T + H N S K I + + N + GK+ V + A + + Q D++L+ +
Sbjct: 291 TDHYTLVNHAYPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKA 350
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+T P +E H T +S + LFY RGI ++ A AL+ F VL+ +
Sbjct: 351 TVYTKPQLEIFADDVKCSHGCTVGSLSADFLFYLQTRGIGKKEASALLTYAFANTVLESV 410
Query: 469 PMEFAVE-AQKLIDISL 484
+ E ++I L
Sbjct: 411 KIPALSEYINRIIAKKL 427
>gi|257051465|ref|YP_003129298.1| SufBD protein [Halorhabdus utahensis DSM 12940]
gi|256690228|gb|ACV10565.1| SufBD protein [Halorhabdus utahensis DSM 12940]
Length = 403
Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats.
Identities = 110/451 (24%), Positives = 197/451 (43%), Gaps = 62/451 (13%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLYYYAAPKSI 95
D + ISA+ EP+W+ E RL A+ + PS R + D L
Sbjct: 10 TADDVEQISAELGEPEWLTETRLEAFEALADLDMPSVIRTPGRDWTNLDAL--------- 60
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
YE L P+ +E K+ ++
Sbjct: 61 ---------------DYESLVDPLAFEEE------------------------KDRIEAE 81
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV +P +EA+ EH DL++++ +VV ++ AL++A+F+ G+ VY+P+GV
Sbjct: 82 GVDVLPWAEALEEHGDLIEEHFGSVVDPQRDYLTALSTALFSAGTVVYVPEGVAAED--- 138
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKY 274
R F TL+I +E + V+ LE + Q ++ VVE+VA +N+ ++Y
Sbjct: 139 VKIRTRMNSRSLFNYTLVITEESASVTILERQETGEELPGEQYYSGVVEVVASENSHVQY 198
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
++QN YN+ KRG + + W + GS +T L G+ S
Sbjct: 199 GSLQNLSEA-------TYNYSVKRGHA-DQYATVDWIEGNIGSRLTKTNVETRLLGDSSE 250
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + Q +D +++ H A++TT+ +V++G+ + + Y G V A +
Sbjct: 251 SQIVGAFFGHEDQHLDIASRVWHEAEHTTADLVTRGVLDDEARSVYEGVQDVGTDAWDTS 310
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
++ + ++L++ ++ A P + N H AT ++ E LFY RG+ EE+A
Sbjct: 311 SYQRENTLMLSDDSEADASPKLIINNHDTEASHSATVGQVDAEDLFYMTSRGVDEESATN 370
Query: 455 LIVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
++V GF VL+++ E + +L+ L
Sbjct: 371 MLVEGFFVPVLEEVAVDELREDLDELVVDRL 401
>gi|189501697|ref|YP_001957414.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497138|gb|ACE05685.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
Length = 439
Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats.
Identities = 86/440 (19%), Positives = 157/440 (35%), Gaps = 38/440 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L E R IS+ DW + + AYR + + P Y +
Sbjct: 10 LQEAFSRHISSLSTTHDW-QKVQQEAYRTFQKLGLPHAKTEAYKNTPITSV--------- 59
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE---- 151
L + +PI E ++ + V V +
Sbjct: 60 ------------LSEKFNLSDVPIALDEPSEEIEALLQQSFDSYPIVLVNGMISKRYTPI 107
Query: 152 -LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
L EA +HPDL+ K+ + + +N+A+F G +YIP V
Sbjct: 108 NLLHPSFQVYTFDEAYTQHPDLLMKHFDQCASDKLDIFTFINTALFKTGIMIYIPDNVVL 167
Query: 211 PMELSTYFRINE--KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
L Y + + + R LI+ + S +S + + AV +++
Sbjct: 168 DKTLHIYNITDAATQKAISYPRLLIVTGKNSQLSIINSWHTLG-ENEGFTNAVTDIIVGP 226
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
++ T+Q G++ I+ + + S ++ + ++
Sbjct: 227 YTQLDCYTLQT-QLGNACQINNIHYY-------QAEHSVVNNYAFSWDGMLIRNNLHIVI 278
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
+ + Y + N Q ID+ T + H +T S + KGI G + + G++ V
Sbjct: 279 QASHAEANMYGLYCLNNTQHIDNHTLVDHQQPHTASNELYKGIIGGNATGVFNGRIYVQP 338
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
A + F +++L+ + HT P +E H AT ++ + LFY RGIP
Sbjct: 339 EAQKTNAFQANNNILLSDQATIHTKPQLEIWADDVKCSHGATIGQLDESQLFYLQSRGIP 398
Query: 449 EEAAIALIVNGFVREVLQKL 468
E A +++ F EV+ K+
Sbjct: 399 EGLAKHMLLESFADEVISKI 418
>gi|92113361|ref|YP_573289.1| FeS assembly protein SufD [Chromohalobacter salexigens DSM 3043]
gi|91796451|gb|ABE58590.1| Iron-regulated ABC transporter permease protein SufD
[Chromohalobacter salexigens DSM 3043]
Length = 445
Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats.
Identities = 87/439 (19%), Positives = 158/439 (35%), Gaps = 32/439 (7%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
+EP W+ R R+ + P+ R A + D+ A + + +
Sbjct: 17 DEPTWVTARRQAGAARFEALGFPT---KRDEAWKYTDVRRIAEGEFALTYDA-----ELS 68
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+E L +P+ + D V E G+ P++ A+
Sbjct: 69 ASRFEALSMPLDAYRL------------VFVDGVFSTALSDVEALPEGISIEPLTTAMRT 116
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF--RINEKGTG 226
+ + + + + V + + ALN A+ +G+ V I +GV + F R NE
Sbjct: 117 NHEAIGGAIGRLAGVDFSPFTALNVALSEEGAVVRIGQGVVVDKPIYVVFASRANEAPRM 176
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R L++A S + +E N V E++ A + + +Q D
Sbjct: 177 SHPRVLVMAGARSQSTVIEHYAGETGAAN-FTNVVSEVMLERGAIVDHYKLQEASSEDLH 235
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V + S+ + L G A+ L + + + + G
Sbjct: 236 --------VASIHVEQARDSRFTSFNLNLGGALVRTDLVTDLNAQGAEANYNGLFFVQGR 287
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q +D+ T + H A T S KGI + + GKV V R + + +LL+ +
Sbjct: 288 QHVDNHTLVNHNAPQTFSNENYKGILNDRARGVFNGKVIVKRDSQQIEAYQNNANLLLSD 347
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H TT ++ +E +F RGI E+ A L+ F EV+
Sbjct: 348 RAEIDTKPELEIYADDVKCSHGTTTGQLDEEAVFALRTRGIDEQMARGLLTLAFAGEVMD 407
Query: 467 KLPMEFAVE-AQKLIDISL 484
++ + E ++ + L
Sbjct: 408 QVRLPAIAERVERAVAGKL 426
>gi|253795582|ref|YP_003038678.1| putative FeS assembly protein SufB [Candidatus Hodgkinia cicadicola
Dsem]
gi|253739890|gb|ACT34225.1| putative FeS assembly protein SufB [Candidatus Hodgkinia cicadicola
Dsem]
Length = 420
Score = 249 bits (637), Expect = 6e-64, Method: Composition-based stats.
Identities = 162/447 (36%), Positives = 247/447 (55%), Gaps = 38/447 (8%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL+ + +A + EP W++ WR+ AY + P W+ + + A P +
Sbjct: 8 GLS--AVLEAAATRREPRWLVSWRVNAYYCYAFSTVPKWSGVH------SAVCTLAPPCA 59
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
G GV VD VFD+ SV + +EL++
Sbjct: 60 AGGCDGA------------------------RGVGAYAQNVDVVFDASSVFLSASKELRR 95
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV+F P+S+A+ H LV++++ +VV D++YAALN+ +FTDG+FV++P GV CP L
Sbjct: 96 LGVVFEPLSKAVFLHSKLVRRHMGSVVCHNDSYYAALNACLFTDGTFVWVPAGVACPATL 155
Query: 215 STYFRINEKGT-GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
STYF++ GQFERTL++ S Y EGC A + LHAAVVE+V A K
Sbjct: 156 STYFKMTTSSRWGQFERTLVVLCARSKALYFEGCNAAKLLAPALHAAVVEVVIGARATAK 215
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y+T+QNW G +YNFVTKR C G + + W Q+E G+ +TWKYPS +L S
Sbjct: 216 YATLQNWASSARAG---VYNFVTKRAVCAGAGAGVVWVQIEIGALLTWKYPSSVLLAPAS 272
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
EF S+++SNG Q++D+GTK HLA NT S +V+K I+ S++ +R +V A+
Sbjct: 273 RSEFLSLSVSNGLQRVDTGTKCWHLAPNTCSTVVAKSIALASSSSVFRALCAV--RASDC 330
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
R +CDSL+ G+ C +P + ++E+E+ TS ++ L YC RG+ E A+
Sbjct: 331 RCNIRCDSLVFGSLCAVRALPVVVVDGWPSSVEYESVTSYVTAMQLEYCRLRGLSEADAV 390
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLI 480
L+VNG+ +V++ LP+E ++E +L+
Sbjct: 391 RLVVNGYAHDVVRHLPLEASLEVTRLL 417
>gi|238854815|ref|ZP_04645145.1| FeS assembly protein SufD [Lactobacillus jensenii 269-3]
gi|260664046|ref|ZP_05864899.1| FeS assembly protein SufD [Lactobacillus jensenii SJ-7A-US]
gi|282933893|ref|ZP_06339241.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
gi|313472320|ref|ZP_07812812.1| FeS assembly protein SufD [Lactobacillus jensenii 1153]
gi|238832605|gb|EEQ24912.1| FeS assembly protein SufD [Lactobacillus jensenii 269-3]
gi|239529825|gb|EEQ68826.1| FeS assembly protein SufD [Lactobacillus jensenii 1153]
gi|260561932|gb|EEX27901.1| FeS assembly protein SufD [Lactobacillus jensenii SJ-7A-US]
gi|281301982|gb|EFA94236.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
Length = 409
Score = 249 bits (637), Expect = 6e-64, Method: Composition-based stats.
Identities = 89/452 (19%), Positives = 180/452 (39%), Gaps = 49/452 (10%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ + ++ K+ EP W E R A + P + +++Y D + +
Sbjct: 2 ESVETLAKKRLEPTWFEEIREKASQLIGKTPYPDFKKLKYKDWDLHLTGNFVS------- 54
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
T+ + E LA + +E +K GVI
Sbjct: 55 ----------TETFTANANVAQAGENLAQI------------------NLPDEYRKKGVI 86
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
EA+ +P LV+KY + D+ + A + A G F+Y+PK V+ + L+
Sbjct: 87 VADFHEALQNYPKLVQKYFMTKGLKASDDEFLAEHVAYLQSGLFIYVPKDVQVEIPLTCE 146
Query: 218 FRINEKGTGQFERT-LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ ++ L+I DEGS SY+E Q +E V E++A N+ + +++
Sbjct: 147 YLQKAALASEYVHHVLLIVDEGSSFSYIE-KLTSQGNEKSKVNFVCEVIAKKNSHVHFTS 205
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ N + +++ +RG +K+ W T + L G+ S E
Sbjct: 206 IDNLAE-------NVTSYLNRRG-YLEKDAKVDWAMALMNDGRTLGDFNSDLVGDGSHAE 257
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
++ IS Q T++ + NT I+ G+S S + + +G+ S
Sbjct: 258 LKAVGISTNSQIQGINTRVTNYGNNTIGHILQHGVSLDKSTLIFNAVGHIMKGSKGSDAE 317
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ P + ++ H A+ +++ E L+Y + RG+ ++ A ++
Sbjct: 318 QESRILMLSQGARGDANPILLIDDNDVMAGHAASIGRVNPEQLYYLMSRGLDKKMAERVV 377
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL+++P + +++ +E +
Sbjct: 378 IRGFLSPVLEEIP---TADLKQVFSDLIERKI 406
>gi|256851339|ref|ZP_05556728.1| FeS assembly protein SufD [Lactobacillus jensenii 27-2-CHN]
gi|260660764|ref|ZP_05861679.1| FeS assembly protein SufD [Lactobacillus jensenii 115-3-CHN]
gi|282933215|ref|ZP_06338602.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
gi|297206210|ref|ZP_06923605.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus jensenii JV-V16]
gi|256616401|gb|EEU21589.1| FeS assembly protein SufD [Lactobacillus jensenii 27-2-CHN]
gi|260548486|gb|EEX24461.1| FeS assembly protein SufD [Lactobacillus jensenii 115-3-CHN]
gi|281302719|gb|EFA94934.1| FeS assembly protein SufD [Lactobacillus jensenii 208-1]
gi|297149336|gb|EFH29634.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus jensenii JV-V16]
Length = 409
Score = 249 bits (637), Expect = 6e-64, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 176/452 (38%), Gaps = 49/452 (10%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
+ + ++ K+ EP W E R A + P + +++Y D
Sbjct: 2 ENVETLAKKRLEPTWFSEIRENASQLIGKTPYPDFKKLKYKHWDL--------------- 46
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
IP A V + + +E +K GVI
Sbjct: 47 ------------HLTGNFIPTESFASKANVVQAGENLAQ--------INIPDEYRKKGVI 86
Query: 159 FMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+A+ +P L+KKY + D+ + A + A G F+Y+PK V L+
Sbjct: 87 VADFHDALQNYPKLIKKYFMTKGLKASDDEFLAEHVAYLQSGLFIYVPKNVHVETPLTCE 146
Query: 218 FRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ G+ L+I DEGS SY+E Q +E V E++A N+ + Y++
Sbjct: 147 YLQKAALGSEYVHHVLLIVDEGSNFSYIE-KLTSQGNEASKVNFVCEVIAKKNSHVHYTS 205
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ N + +++ +RG +K+ W +T + L G+ S E
Sbjct: 206 IDNLAE-------NVTSYLNRRG-YLEKDAKVDWAMALMNDGLTLGDFNSDLVGDGSHAE 257
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
++ IS Q T++ + NT I+ G+S S + + +G+ S
Sbjct: 258 LKAVGISTNNQVQGINTRVTNYGNNTIGHILQHGVSLDKSTLIFNAVGHIMKGSKGSDAE 317
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ L++ P + ++ H A+ +++ E L+Y + RG+ ++ A ++
Sbjct: 318 QESRILMLSQGARGDANPILLIDDNDVMAGHAASIGRVNPEQLYYLMSRGLDKKMAERVV 377
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ GF+ VL+++P + +++ +E +
Sbjct: 378 IRGFLSPVLEEIP---TADLKQVFSDLIERKI 406
>gi|288940481|ref|YP_003442721.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
gi|288895853|gb|ADC61689.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
Length = 433
Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats.
Identities = 85/427 (19%), Positives = 150/427 (35%), Gaps = 28/427 (6%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
PDW+LE R A R T P + A + +L + L + PE L
Sbjct: 22 PDWLLEHRRAARARLSTQPLP---HSKQEAWRYTNLKGLLEQDFTAIEEPLSALQPEDLD 78
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T G ++ G +++ +G + + + P
Sbjct: 79 TVLIPGFDAHRVVLVNGRFAPELSTLGEL--------------PAGARIGGLRDWLDHDP 124
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN--EKGTGQF 228
+ ++ L F+A LN+A DG V++ +GV L ++
Sbjct: 125 ESLRGRLDAARGESGAFFALLNTAGLDDGLVVWLARGVILERPLELIHLSVGLDEPRVAQ 184
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R L+ + G+ + +E + AV+E+V +A +K+ +Q
Sbjct: 185 PRHLVHLEAGAQATLVERYVSLGESLYC-TNAVMEVVLERDAVLKHERLQ-------MES 236
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
++ T + S + + G+ + RGEQ+ + + ++ Q
Sbjct: 237 RNAFHL-TGFYLVQDENSHYAGVNIGLGARWARTDLNTRFRGEQAECVLHGLYLAGDGQL 295
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D + H N S KG+ G + G+V V + A S +L++
Sbjct: 296 LDYHLDVEHAVPNCRSEENFKGLLTGQGRAVFDGRVLVSKDAQKSDAAMSNRNLMLSEQA 355
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
T P +E H T +I E LFY RGI A ++ GF E++ +L
Sbjct: 356 EIDTKPQLEIYADDVKCSHGTTVGQIEPEMLFYLRSRGIDAAQARRMLCLGFAGEIIDRL 415
Query: 469 PMEFAVE 475
E E
Sbjct: 416 SDEAVRE 422
>gi|300767146|ref|ZP_07077058.1| FeS assembly ATPase SufD [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300494965|gb|EFK30121.1| FeS assembly ATPase SufD [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 433
Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats.
Identities = 88/445 (19%), Positives = 162/445 (36%), Gaps = 36/445 (8%)
Query: 47 KKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
+ EP W++E RL A + P R P S D
Sbjct: 20 EHGEPHWLVERRLAALDAMQGLAVPKADRFSIRDWPLT-------PTDQPLKFSRSDRTL 72
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
T E I I +V +EL GVI + A
Sbjct: 73 ATDVTAEAGHIQI-----------------VQVGQTTVTVNLPDELDDQGVILTDMFTAF 115
Query: 167 CEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KG 224
EHP L +K+ VV ++ + ++A G F+Y+PKGV + + +
Sbjct: 116 REHPQLTEKHFMDKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTRV 175
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
LI+A++ S+ + + T +N + VVE++A ++E+ +S
Sbjct: 176 QPLISHVLIVAEQDSHFAVTQHLTTKGDVDN-IANCVVEILARADSEVHFSAFDELGA-- 232
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++ +R +K+ W + T+ L GE + + I ++
Sbjct: 233 -----NTTAYLNRR-AAISRGAKVDWAIGMMNNGNTFGDFDSELIGEGAKSDAKVITVTT 286
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q + T++ + K T IV +G+ SN + G + GA+ + + L++
Sbjct: 287 KAQDVCVNTRVTNRGKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMM 346
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
++ P + + H A+ +I +Y + RGI + A L++ GF+ V
Sbjct: 347 SDDAHGDANPILLIDENDVLAGHAASVGQIDQNQTYYLMSRGIDKPQAQRLVIRGFLSTV 406
Query: 465 LQKLPMEFAV-EAQKLIDISLEGSV 488
+ +P + I+ LE +
Sbjct: 407 IGAIPSKTVRTRLTNTIERKLEDGI 431
>gi|227893109|ref|ZP_04010914.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227865087|gb|EEJ72508.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 425
Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats.
Identities = 92/448 (20%), Positives = 172/448 (38%), Gaps = 42/448 (9%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
+S + +EP W+ + R A + + P +DF + PK+I +
Sbjct: 9 KLSEENHEPSWLTKRREKAQEQISQLAMPKMEHFHPGDVDFAN-----KPKTICANDTSS 63
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+ E T F + ++ T E+ GV+ + +
Sbjct: 64 ENVTEDFET-----------------------NLIQFGTDTIQTNLSPEMANKGVVLVDL 100
Query: 163 SEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
+A + PD ++KY T V+ +N A + A G +YIPK V + +
Sbjct: 101 FDAFRDLPDFMRKYFMTEVIKGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQD 160
Query: 222 E-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
K ++ LI+AD S +L+ T + N + +VE++A + +++S+V+
Sbjct: 161 STKKLNWYQHLLIVADSNSSCRFLQHLTTVGEESN-IANMMVEIIAKPGSHVEFSSVEEL 219
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
F R + + W S T L GE S +
Sbjct: 220 SKK--------TTFYFDRHAKIEKDAHVEWAIGLMNSCDTLGEIDSELVGEGSYANSQLV 271
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++++G Q+ ++ + ++T I +G+ S + G + GA S+ Q
Sbjct: 272 SVTSGKQKSFINNRVTNRGPHSTGLINQRGVLLDQSKLIFNGIGQIVHGAHGSKADQQNR 331
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++ + P + + H A+ + + Y + RGIP + A L++ GF
Sbjct: 332 VLMMSPDARGDANPLLLIDENDVIAAHAASVGPVDPVQMNYLMSRGIPYDQAQRLVIRGF 391
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ VL +P + QK+IDI LE +
Sbjct: 392 LGAVLDAVPDKDVR--QKMIDI-LERKL 416
>gi|298387897|ref|ZP_06997446.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
gi|298259304|gb|EFI02179.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
Length = 447
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 93/434 (21%), Positives = 160/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 30 RAAAFADFERLGFPTRKMEKY---KYTDISKYFEPDYGLN--------------LNRLQI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GVIF + E EHP+LVKK+
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYNKALPKTHLPEGVIFGSLKEVAAEHPELVKKF 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG Y+PK V + + R LII
Sbjct: 133 YGKLADTSKDGITAFNTAFAQDGVIFYVPKNVIVEKPIQLVNILRADVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +NA + + +
Sbjct: 193 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENAVFDMYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q +D+ T +
Sbjct: 244 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSTGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|29348817|ref|NP_812320.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|253568838|ref|ZP_04846248.1| ABC transporter permease [Bacteroides sp. 1_1_6]
gi|29340723|gb|AAO78514.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides thetaiotaomicron VPI-5482]
gi|251840857|gb|EES68938.1| ABC transporter permease [Bacteroides sp. 1_1_6]
Length = 447
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 94/434 (21%), Positives = 160/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 30 RAAAFADFERLGFPTRKMEKY---KYTDISKYFEPDYGLN--------------LNRLQI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GVIF + E EHP+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYNKALPKTHLPEGVIFGSLKEVAAEHPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG Y+PK V + + R LII
Sbjct: 133 YGKLADTSKDGITAFNTAFAQDGVIFYVPKNVIVEKPIQLVNILRADVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +NA + + +
Sbjct: 193 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENAVFDMYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q +D+ T +
Sbjct: 244 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSTGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|86140875|ref|ZP_01059434.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
gi|85832817|gb|EAQ51266.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
Length = 437
Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 160/441 (36%), Gaps = 37/441 (8%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
L+ + A + + T PS + + L P + + D ++ + ++ Y
Sbjct: 25 LDIKDQAIKVFETEGFPS---KKDENWKYTSLNSVTKPDYSLVSHADDAIEFKDVKQYFL 81
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI--CEHPDL 172
I + + G V +++ E GV +S A+ + +
Sbjct: 82 NDIDTFKIVFIDG----------------VYSSYLSETTHDGVDVCLLSSALTKPKFKQV 125
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTGQFER 230
+ Y + + ALN+A +G+++Y+PK + +E R
Sbjct: 126 IDVYFNKIAKKE--SLTALNTAFAKEGAYIYVPKSRAVNKPIQIVHLSTGSEANLMLQPR 183
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+A+E + V +E + +V E+ A +A + Y +QN S
Sbjct: 184 NLIVAEENAEVQVIERHQSLS-SNAVFTNSVTEIYAGKHARVDYYKIQNDKENASLIDNT 242
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ S++S G +T + GE + I Q +D
Sbjct: 243 --------HIDQQESSEVSVHTFSFGGKLTRNNLNYYQNGEHINSILKGVTIIEDKQHVD 294
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + H N S KGI + + GKV V A + +++L+ +
Sbjct: 295 HNTLVHHRQPNCESHQDYKGIFDDRATGVFNGKVVVDDIAQKINAYQSNNNILVSDKASI 354
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KL 468
++ P +E H T ++ ++ LFY RGI ++ AL++ F VL+ K+
Sbjct: 355 NSKPQLEIFADDVRCSHGCTIGQLDEDALFYMRTRGIGKKEGRALLMYAFANNVLESVKI 414
Query: 469 PMEFAVEAQKLIDISLEGSVG 489
P + LI L ++G
Sbjct: 415 P-QLKARITNLIAEKLGVNIG 434
>gi|322371763|ref|ZP_08046306.1| SufBD protein [Haladaptatus paucihalophilus DX253]
gi|320548648|gb|EFW90319.1| SufBD protein [Haladaptatus paucihalophilus DX253]
Length = 402
Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats.
Identities = 105/440 (23%), Positives = 197/440 (44%), Gaps = 58/440 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E+ +R IS +EPDW+LE RL A +D D+
Sbjct: 9 LSEETVREISGDLDEPDWLLETRLEALDA-------------LSELDMPDVI-------R 48
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ ++D YE P+ E KE ++
Sbjct: 49 TPGRDWTNLDA---LDYESFVDPLSAAEE------------------------KERVEPE 81
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV + +S+A+ EH ++V++Y +V+ +N+ AL++A+FT G+ VY+P+GV
Sbjct: 82 GVSVLSLSDALDEHEEIVEEYFGSVIDPQENYLTALSAALFTSGTLVYVPEGVDAED--- 138
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
R + F TL++ ++ S V+ LE + + D + ++ +VE+ A +N+ ++Y
Sbjct: 139 VTIRTTMQSQSLFNYTLVVTEKSSSVTILERQESEELDGERYYSGLVEIAAGENSHVQYG 198
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++Q+ Y + KRG + ++W + GS +T +L GE S
Sbjct: 199 SLQDVDEE-------TYTYTLKRG-TAADHATVNWVEGNIGSRLTKSSVETMLDGEGSET 250
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q D ++ H ++TT+ +V++G+ + + Y G V + A + +
Sbjct: 251 KTVGAFFGHDDQHFDVAARVWHKNEHTTADLVTRGVLDDEARSVYEGVQDVGKEAWDTSS 310
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ + ++L++ + A P + N H AT ++ +E LFY RG+P+E A +
Sbjct: 311 YQRENTLMLSDRSEADASPKLIINNHDTEASHSATVGQVDEEDLFYMTSRGVPDELAKNM 370
Query: 456 IVNGFVREVLQKLPMEFAVE 475
+V GF VL ++ +E E
Sbjct: 371 LVEGFFVPVLDEVEVEELRE 390
>gi|325281868|ref|YP_004254410.1| FeS assembly protein SufD [Odoribacter splanchnicus DSM 20712]
gi|324313677|gb|ADY34230.1| FeS assembly protein SufD [Odoribacter splanchnicus DSM 20712]
Length = 453
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 83/364 (22%), Positives = 145/364 (39%), Gaps = 17/364 (4%)
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPV-GDN 186
V T + V+ + + EE V+ + EA ++PDL K+ + PV +
Sbjct: 92 VTTPVLTVNGWWFDGNPAAEIPEE-----VVICGLQEASVKYPDLFAKHYNHYAPVAHRD 146
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTY-FRINEKGTGQFERTLIIADEGSYVSYLE 245
ALN+A DG FVY+P V L + F+R LI+ + + + L
Sbjct: 147 GLVALNTAFAQDGVFVYVPDDVVLECPLQIINLLRAKADLMGFQRNLIVLGKNARATVLV 206
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
C + + L E+ NA ++Y VQN + G SQ +
Sbjct: 207 -CDHTLSEHDFLINNTTEVYLGPNAHMEYYQVQNQHLGASQ--------INSLFVSEHRN 257
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
S + L E Y + I + Q +D+ + + H+A + TS
Sbjct: 258 STFESNLVTLYGGTIRNNMYVALNEEGGECHLYGMYIQDKKQIVDNFSYIDHIAPHCTSN 317
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
KG+ + + G + V A + + ++LL+ + + P +
Sbjct: 318 EHFKGVLDDAALANFSGCIRVRPDAQKTEAYQANNNLLLTDTARINAKPQLIIDADDVKC 377
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISL 484
H AT +I +E +FY RGI E A +++ GF ++++++ +E V+ LID L
Sbjct: 378 SHGATVGQIDEEAMFYLRSRGISPEEARMMMMFGFAHDIIRRVKLEPLRVKIDDLIDKRL 437
Query: 485 EGSV 488
G +
Sbjct: 438 RGEL 441
>gi|294507395|ref|YP_003571453.1| FeS assembly protein SufD [Salinibacter ruber M8]
gi|294343723|emb|CBH24501.1| FeS assembly protein SufD [Salinibacter ruber M8]
Length = 487
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 81/412 (19%), Positives = 154/412 (37%), Gaps = 28/412 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A R+ + P+ A + ++ P ++ +DP + +
Sbjct: 79 REDAIERFAQLGIPT---NDLEAWKYTNISKTIDRPYTLSLSPEGPSLDPSDIAPFTIDE 135
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ ++ G ++ S GV+ +++A EHPD+V+++
Sbjct: 136 MDAHRVVLVNGHVDESLSDIGDLPS--------------GVVLSSLAQAGEEHPDIVEEH 181
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-NEKGTGQFERTLIIA 235
D ALN+A DG+F+Y+P G + + R L +
Sbjct: 182 YGQYADFEDEALTALNTAFVQDGAFIYVPSGTIVEKPIFFLHITAGSEPLFLQPRHLFVV 241
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ +E + V E + A +++ VQ+ SQ V
Sbjct: 242 EDGAIAKVVEA-QHSVTEAQTFTNTVSEAFVGERANLEHYLVQDEGANASQ--------V 292
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
R + S S + + + + G Y + I +D+ T+M
Sbjct: 293 HTRAGQQEDDSVYSTNTITFSGEVVRNNATIEVNGSFCESNLYGLCIGKDEMHVDNHTQM 352
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+ + +S + K + S + GKV V RG+ + Q D++++ + +T P
Sbjct: 353 NHVQPDCSSNELYKHVLNDESTAVFNGKVLVTRGSQRIDAYQQNDTIVLTTDANIYTKPE 412
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+E H ATT ++ +E +FY RG+ E A L++ F EVL +
Sbjct: 413 LEIYADDVVCSHGATTGQVDEEGVFYLRSRGLSERRAHILMLQAFTDEVLSE 464
>gi|325953986|ref|YP_004237646.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
gi|323436604|gb|ADX67068.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
Length = 439
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 87/438 (19%), Positives = 163/438 (37%), Gaps = 34/438 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A + P + + ++ + P++ ++ + ++ Y
Sbjct: 27 ELRQHAIEVFKEKGFPK---RKDEEWKYTNIAPILKVDYKLFPETEVGLEYKDIKKYLIN 83
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLV 173
I V ++ + S TT E +S A+ H ++
Sbjct: 84 DID----------TYLIVFINGKYSSFLSNTTHDE------ADICVLSSALNNSVHHSVI 127
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE--KGTGQFERT 231
+ Y + ++F A LN+A DG+F+Y+P + + + R
Sbjct: 128 ENYFGKIAAKDESFTA-LNTAFARDGAFIYVPNNTILSKPIQVVYFSTGVLQEVMYQPRN 186
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ + + +E C L AV E+ NAE++ QN + +
Sbjct: 187 LIVIGDNAQAQIIE-CHQTLDGVANLTNAVTEVNVGKNAEVQIHKFQN-DSDNVSLIDNV 244
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
Y + S+ S G I + GE + I + Q +D
Sbjct: 245 Y-------INQERDSRASVFTFAFGGKIVRNNLNFYQNGENCNSILDGVTIIDKKQHVDH 297
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T ++H N S + KGI A ++ + GK+ VH+ A F Q +++L+ ++
Sbjct: 298 HTLVVHNYPNCESHELYKGIYADEAHGVFNGKIYVHKEAQKLNAFQQNNNVLLSDSASID 357
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H T ++ ++ +FY QRGI +E A AL++ F + LQ + +
Sbjct: 358 TKPQLEIFADDVKCSHGCTVGQLDEDAMFYMQQRGIGKEVAQALLLYAFAADALQHVTIP 417
Query: 472 FA-VEAQKLIDISLEGSV 488
+ +L+ L S+
Sbjct: 418 QVTAKVNQLVANKLGVSI 435
>gi|89889830|ref|ZP_01201341.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
gi|89518103|gb|EAS20759.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
Length = 437
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 88/440 (20%), Positives = 160/440 (36%), Gaps = 37/440 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + P Y + L + P+ ++ ++ Y
Sbjct: 26 QLRNEALASFEELGIPQRKEEAY---KYTSLKSLFNKDYSLFPKKESAIEYGDIKPYLIH 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLV 173
I + G+ +S + E +S A+ + ++
Sbjct: 83 QIDAYRVIFIDGIYSSHL----------------SETTHDKFDVCLMSSALNNPKYSPVI 126
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTGQFERT 231
+ Y + + P + +LN+A +G+++ I K + + NE R
Sbjct: 127 EAYYNKLAPK--DGLTSLNTAFAREGAYISIGKNTAVEKPIEVVYFSTGNESTLMTQPRN 184
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L++ E S V +E + ++ L +V E+ A A + Y +QN + S
Sbjct: 185 LVVVGENSQVQIIERHQSLSDNQ-VLTNSVTEIFADKRAMVDYYKIQNDHLNAS------ 237
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + S++ G A+T + RGE + I G Q +D
Sbjct: 238 --LIDHTSVEQKSDSEVRLHTFSFGGALTRNNLNFYQRGEHCNSILNGVTIIEGKQHVDH 295
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H A N S K I + + GKV V + A F Q +++L+ + +
Sbjct: 296 STLVHHTAPNCESYQQYKQIFDDKAVGVFNGKVLVDKIAQKINAFQQNNNILVSDKATIN 355
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLP 469
P +E H T ++ ++ LFY RGI ++ A AL++ F VL+ K+P
Sbjct: 356 AKPQLEIFADDVRCSHGCTIGQLDEDALFYMQSRGIGKKEARALLMFAFANSVLESVKIP 415
Query: 470 MEFAVEAQKLIDISLEGSVG 489
E KLI L +G
Sbjct: 416 -EIKSRITKLIAKKLGVEIG 434
>gi|110637386|ref|YP_677593.1| iron-regulated ABC transporter membrane-spanning permease
[Cytophaga hutchinsonii ATCC 33406]
gi|110280067|gb|ABG58253.1| Iron-regulated ABC transporter permease protein SufD [Cytophaga
hutchinsonii ATCC 33406]
Length = 425
Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 157/437 (35%), Gaps = 39/437 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+++ R A + + P+ ++ + +L A +S + ++
Sbjct: 25 LVDTRKEAISAFQELGFPT---TKHEEWKYTNLKNTIAKTY--AIESAATFSADDIKALT 79
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
L I + + G+ + + + SGV P + + ++V
Sbjct: 80 ALPIDCYKVIFVNGIFSPAL----------------SSIDASGVTIEPFQTS---NQEVV 120
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERT 231
K Y +P D+ A LN A TDG+ +++ + ++ + + F
Sbjct: 121 KNYFGKNLPYNDSMVA-LNVAFATDGTLIHVKAKQHITKPIVCFYLSDVRSANVFAQPSV 179
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ +E + + +E A + A ++ +QN
Sbjct: 180 LIVVEEAASATVVE-LNRSLGKNTAFTNAFTHAILKKEAYLEQYKIQNDIDNS------- 231
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
NF+ +S T + + + L E + + G Q +D+
Sbjct: 232 -NFIHNSQIVHEGKSNSYTTTITLNGGLVRNNLNITLGAEYCEAYLNGLYLEKGAQHVDN 290
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + S + KGI G S + GK+ V + A + F ++L+ H
Sbjct: 291 HTLVDHAMPHCYSNELYKGILDGKSTGVFNGKIWVRKDAQKTNAFQSNKNILLSKEASVH 350
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H ATT ++ E +FY RG+ E+ A ++V+ +VL K+
Sbjct: 351 TKPQLEIFADDVKCSHGATTGQLDPEAMFYLRARGVGEDKAKKMLVHAIAFDVLDKVKH- 409
Query: 472 FAVEAQKLIDISLEGSV 488
E + ++ +E +
Sbjct: 410 --DELRGYLEQEIEERL 424
>gi|295132093|ref|YP_003582769.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
gi|294980108|gb|ADF50573.1| FeS assembly protein SufD [Zunongwangia profunda SM-A87]
Length = 437
Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats.
Identities = 93/440 (21%), Positives = 168/440 (38%), Gaps = 37/440 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + T+ PS A + L + P+ + ++ ++ Y
Sbjct: 26 QIRSQAIKDFETIGFPSKKE---EAWKYTSLKSTLKHDYSIFPKEENAIEYSQIKKYLIH 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE--HPDLV 173
I + V +D ++ S TT + + +S A+ + ++
Sbjct: 83 DIDTYD----------LVFIDGIYSSHLSNTTHDK------IDVCLMSSALNKDKFKPVI 126
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST--YFRINEKGTGQFERT 231
Y + + P N ALN+A +G++++I K + + + NE R
Sbjct: 127 DNYFNKLAPK--NGLNALNTAFTKEGAYIHIHKNIMADKPIQIINFSTGNESSLLLQPRN 184
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ DE S+V +E + L +V E+ A A + Y +QN
Sbjct: 185 LIVVDENSHVQIIEKHQSLT-SHPVLTNSVTEIFADRRAIVDYYKIQNDKE--------T 235
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + + S S G +T + +GE+ + I G Q +D
Sbjct: 236 SSLIDNTFIEQKDESNCSVHTFSFGGNLTRNNLNFYQKGERIDSTMKGVTIIEGKQHVDH 295
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H+ N S KGI + S + GKV V + A + + +++L+ + +
Sbjct: 296 NTLVHHIYPNCESHQDYKGIFSDKSVGVFNGKVVVEKEAQKTNAYQANNNILVDDKATIN 355
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLP 469
+ P +E H T ++ +E LFY RGIP + A L++ F VL+ K+P
Sbjct: 356 SKPQLEIFADDVRCSHGCTIGQLDEEALFYLQSRGIPRKEARGLLMYAFANNVLESVKIP 415
Query: 470 MEFAVEAQKLIDISLEGSVG 489
E LI L +G
Sbjct: 416 -EIKKRINNLIAEKLGVELG 434
>gi|28378186|ref|NP_785078.1| ABC transporter component (putative) [Lactobacillus plantarum
WCFS1]
gi|28271021|emb|CAD63926.1| ABC transporter component (putative) [Lactobacillus plantarum
WCFS1]
Length = 433
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 87/445 (19%), Positives = 162/445 (36%), Gaps = 36/445 (8%)
Query: 47 KKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
+ EP W++E RL A + P R P S D
Sbjct: 20 EHGEPHWLVERRLAALDAMQGLAVPKADRFSICDWPLT-------PTDQPLKFSRSDRTL 72
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
T E I I +V +EL GVI + A
Sbjct: 73 ATDVTAEAGHIQI-----------------VQVGQTTVTVNLPDELDDQGVILTDMFTAF 115
Query: 167 CEHPDLV-KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KG 224
EHP L K ++ VV ++ + ++A G F+Y+PKGV + + +
Sbjct: 116 REHPQLTEKHFMGKVVKTDEDRLTSYHTAFLNAGVFLYVPKGVTVKEPIEITTIQDSTRV 175
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
LI+A++ S+ + + T +N + VVE++A ++E+ +S
Sbjct: 176 QPLISHVLIVAEQDSHFAVTQHLTTKGDVDN-IANCVVEILARADSEVHFSAFDELGA-- 232
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++ +R +K+ W + T+ L E + + I ++
Sbjct: 233 -----NTTAYLNRR-AAISRGAKVDWAIGMMNNGNTFGDFDSELISEGAKSDAKVITVTT 286
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q + T++ + K T IV +G+ SN + G + GA+ + + L++
Sbjct: 287 KAQDVCVNTRVTNRGKKTDGNIVQRGVIMEKSNLIFNGIGHIIHGASGAHAEQENRVLMM 346
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
++ P + + H A+ +I ++Y + RGI + A L++ GF+ V
Sbjct: 347 SDDAHGDANPILLIDENDVLAGHAASVGQIDQNQMYYLMSRGIDKPQAQRLVIRGFLSTV 406
Query: 465 LQKLPMEFAV-EAQKLIDISLEGSV 488
+ +P + I+ LE +
Sbjct: 407 IGAIPSKTVRTRLTNTIERKLEDGI 431
>gi|226228435|ref|YP_002762541.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
gi|226091626|dbj|BAH40071.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
Length = 438
Score = 246 bits (629), Expect = 5e-63, Method: Composition-based stats.
Identities = 87/432 (20%), Positives = 161/432 (37%), Gaps = 27/432 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ R + ++ P+ R + ++ A+ + V
Sbjct: 23 LKALRTAGAEAFKSLGFPT---TREEDWHYTNVSAIASAQFDVAAD---------RTAAS 70
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ + G V V+ F + GV MP+++A + P+L+
Sbjct: 71 AVDVAALAPYTFGGTWPLIVFVNGRFSAALSSFG----ALPDGVRVMPLTQAAIDEPELL 126
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERT 231
++L T V + ++ALN+A +G V+I K + + ++ R
Sbjct: 127 SRFLGTAVTPSRDGFSALNAAFAGEGMLVHIAKEMVSDTPVHILHVVDAAGANVMSHPRH 186
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
++IA+ + S +E AVVE+ D A ++ +Q
Sbjct: 187 VLIAERHAKASVVESYVGLADVP-YFTNAVVEVFVEDGATLQLVRIQRESRSAQH----- 240
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V +G S +TG+A++ +L GE + + G Q D
Sbjct: 241 ---VGTVEARQGRDSHFFAFTFQTGAALSRSNIYTVLAGEGCGCTINGLYMLGGQQHGDH 297
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T++ H+A N SR KG+ S+ + GKV VH A + ++LL+ +
Sbjct: 298 QTRVEHVAPNCFSREQYKGLLDERSHGVFNGKVYVHPEAQKTDGKQTNNTLLLSQDAQID 357
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT +I + LFY RG+ A L++ F +VL+ + +
Sbjct: 358 TKPQLEIFADDVKCTHGATVGRIDETALFYLKSRGVSAGLARQLLMYAFAADVLETIDVP 417
Query: 472 FAVEAQKLIDIS 483
V+A + + +
Sbjct: 418 VIVDALETLTLE 429
>gi|227530412|ref|ZP_03960461.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus vaginalis ATCC 49540]
gi|227349644|gb|EEJ39935.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus vaginalis ATCC 49540]
Length = 431
Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 93/441 (21%), Positives = 173/441 (39%), Gaps = 40/441 (9%)
Query: 46 AKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
A EP+ + + R A++ T + P + +F D + S
Sbjct: 25 AANKEPEELTQLRQRAFQNVTTAQLP-----KVTKFNFQDWPLISEQSS----------P 69
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
+ + E+L P + V S V LK+ GVI + A
Sbjct: 70 LQFPKVIEQLTDPDQ--------------VTVKASSEEVTVVLPNSLKEQGVIISELGSA 115
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I HP+++ KYL+TV+ +N AA ++A G FVY+P+ V + N+
Sbjct: 116 IKTHPEILTKYLATVIRPDENLLAAYHTAFINQGLFVYVPRNVELKKPIHLTINFNQTVK 175
Query: 226 GQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
G LI+A E S ++ + ++ N L V E++A +N+E+ +S++ +
Sbjct: 176 GTINFHLLIVAGENSRFQIIDHLVSSRQQTNPLTNFV-EIMAEENSEVHFSSLDHLAQQS 234
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ +K+ W T L G+ + IA++
Sbjct: 235 PSYY--------QYRAAIKNYAKVDWAIGLMNECNTVGEIDSELVGQGAYANSQLIALTA 286
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
QQ+ ++ + + ++ I +G++ G S + G + GA S Q L++
Sbjct: 287 NDQQLGINNRVTNRSPHSQGLINQRGVALGNSRLIFNGIGQIVHGAHGSEAEQQNRLLMM 346
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ P + + H A+ KI+ + L+Y L RGIP A +++ GF+ V
Sbjct: 347 SPHATGDANPILLIDENDVEAGHAASVGKINQDQLYYLLSRGIPLHQAQRMVIRGFLSAV 406
Query: 465 LQKLPMEFAV-EAQKLIDISL 484
+ +P + E +++ L
Sbjct: 407 ITAVPDKNVRQEMVDILERKL 427
>gi|86132481|ref|ZP_01051075.1| FeS assembly protein SufD [Dokdonia donghaensis MED134]
gi|85817042|gb|EAQ38226.1| FeS assembly protein SufD [Dokdonia donghaensis MED134]
Length = 437
Score = 246 bits (627), Expect = 8e-63, Method: Composition-based stats.
Identities = 90/439 (20%), Positives = 159/439 (36%), Gaps = 37/439 (8%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + P+ + + L + P +D + ++ Y
Sbjct: 27 IRNEAIKTFEAEGFPT---KKLENWKYTSLNSILKEDYNIFPSKEAALDFKDVKQYFLND 83
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI--CEHPDLVK 174
I + + G V +++ E G+ + A+ ++ ++
Sbjct: 84 IDTYKIVFVDG----------------VYSSYLSETTHDGIDVCTMGAALTKPKYKQVID 127
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTL 232
Y + + ALN+A DG+++YIPKG + R L
Sbjct: 128 VYFNKIAKGE--SMDALNTAYAKDGAYIYIPKGKVAQKPIQIVHFSTGTNDAMMLQPRNL 185
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+A+E S V +E + + L V E+ A A + Y +QN S
Sbjct: 186 IVAEENSEVQIIERHQSLSEKK-VLTNVVTEIFADKRALVDYYKIQNDKLDAS------- 237
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ + S +S G IT + +GE + I G Q +D
Sbjct: 238 -LIDTTEIEQHKESIVSVHTFSLGGNITRNNLNFYQKGEYMDSILKGVTIIEGKQHVDHN 296
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H+ N S KGI A S + GKV V + A + + +++L+ + ++
Sbjct: 297 TLVHHITPNCESHQDYKGIFAEKSTGVFNGKVVVEKEAQKTNAYQSNNNILLDDTATINS 356
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KLPM 470
P +E H T ++ + LFY RGI E+ AL++ F VL K+P
Sbjct: 357 KPQLEIFADDVRCSHGCTIGQLDESALFYLQSRGIGEKEGRALLMYAFANTVLSSVKIP- 415
Query: 471 EFAVEAQKLIDISLEGSVG 489
+ KLI + ++G
Sbjct: 416 QLKTRITKLIAKKIGVNIG 434
>gi|315225486|ref|ZP_07867299.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|314944584|gb|EFS96620.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
Length = 433
Score = 246 bits (627), Expect = 9e-63, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 152/437 (34%), Gaps = 36/437 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A + P + A + L L T
Sbjct: 21 LKDIRKEALSFFAEKGFP---HKKVEAWKYTSLS-------------------NLQATDY 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS---GVIFMPISEAICEHP 170
L PI + L+ K A+ + V V + E+ GV P+ EA+ +
Sbjct: 59 SLWQPIHNKTTLSPEVLHKYAIADCYQLVFVNGYYCPEMSSKELIGVTVTPLLEALHKGG 118
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-E 229
+ K + + ALN+A ++G ++ +PKG + + + K T +
Sbjct: 119 EAFIKKYFNTNTEKGDIFTALNTAFASEGIYIEVPKGKVVNKPIQLLYFNDRKETTCYQP 178
Query: 230 RTLIIADEGSYVSYLE-GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R +I E + + +E L AV E+ +A + Y +QN S
Sbjct: 179 RNIIAVGENAQLKVIEVHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDSLTASLID 238
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S S G +T + + E ++I Q
Sbjct: 239 NT--------YISQEANSHASVHTFSFGGTLTRNNLNFYHQDEHLESTLKGLSILKATQH 290
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D T + H N S K I + + N + GK+ V + A + + Q D++L+ +
Sbjct: 291 TDHYTLVNHAYPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKA 350
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+T P +E H T +S + LFY RGI ++ A AL+ F VL+ +
Sbjct: 351 TVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEASALLTYAFANTVLESV 410
Query: 469 PMEFAVE-AQKLIDISL 484
+ E +I L
Sbjct: 411 SIPALSEYINAIIAEKL 427
>gi|83593903|ref|YP_427655.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
gi|83576817|gb|ABC23368.1| FeS assembly protein SufD [Rhodospirillum rubrum ATCC 11170]
Length = 447
Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats.
Identities = 84/432 (19%), Positives = 150/432 (34%), Gaps = 32/432 (7%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ + R + P+ R A + +L P +
Sbjct: 28 PGWLDDLRQAGLDIYRRQGLPTP---RVEAWKYTNLGGLTKIAFKPEPAPV--------- 75
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T + +P+ +LA V V+ D T +G+ ++ + E P
Sbjct: 76 TLDPGRLPLD--RVLALDAHKLVFVNGRLD----RTLSDAGDLPAGLRVSGLAALLAEDP 129
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN--EKGTGQF 228
++ L + D AALN+ + DG + + + L + +
Sbjct: 130 ARIEPLLGKGAALDDLPLAALNTGMIADGMVIEVAEDAVIERPLHVIAVSAALDGPMVFY 189
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R L++ + + E V E+ + A++ + + G + G
Sbjct: 190 PRLLVVVGARARLVLAESHVGLPDHPA-FSNGVSEISLGEGAQLSHYRL---IDGAADGY 245
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
V G+R+ LE G +T L GE+ Q
Sbjct: 246 LVGTTLV-----EVGVRAGYESFTLELGGRLTRNEIRVTLAGEEGQARVSGGYAVRAGQH 300
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+ + H TSR + KG+ ++GK+ V RGA + +LL+
Sbjct: 301 LDNTVLIDHAQPGATSRQLFKGVLDETGKAVFQGKILVRRGAQKTDGQQLHKALLLSRGA 360
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK- 467
T P +E H AT ++ + LFY RG+ E A AL+V F+ +V+ +
Sbjct: 361 EVDTKPELEIYADDVVCGHGATAGEMDADQLFYLQARGLDEATARALLVEAFLEDVVGEV 420
Query: 468 --LPMEFAVEAQ 477
LP+ A+ A+
Sbjct: 421 GDLPVRAAMIAK 432
>gi|153003773|ref|YP_001378098.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
gi|152027346|gb|ABS25114.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
Length = 437
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 91/418 (21%), Positives = 163/418 (38%), Gaps = 28/418 (6%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
EP W+ E R A R+ P+ R F L A L
Sbjct: 18 EPGWLSEARAEALARFRARGLPT---SRDEDWRFTSLAPLA--------------PLVLE 60
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
R + +L ++ D + GV+ P+S A+ E
Sbjct: 61 RAHVADADGGAAAALLDRAPGAEGTRLVFLDGRLRPELSRVGALPGGVVVCPLSRALREA 120
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF- 228
P+LV+ +L + P GD+ + A N+A+ DG FV++ G + F +
Sbjct: 121 PELVRPHLGRLAPPGDHAFVAANAALMADGGFVHLAAGAALDAPVVLVFLASSHRPALAS 180
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
RTL++A EG+ + E + L AV ELV + AE+++ +Q+
Sbjct: 181 PRTLVVAGEGARATVAE--VFLGTEGVYLTNAVTELVLGEGAEVEHLRLQDESRRAFH-- 236
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
V + R+ ++ L G ++ L GEQ+ + +++G +
Sbjct: 237 ------VGVVAAEQQARASLTAHALSLGGRLSRSELRTRLVGEQASVAANGLYMADGERL 290
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+ + + H+A ++ KG+ G S + G++ V GA + +LL+ ++
Sbjct: 291 VDNFSWVEHVAPRCSTAETYKGVLDGHSRGVFSGRIRVLPGAQKTVARQMNSNLLLSDDA 350
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H T ++ + LFY RG+P A L++ F E+++
Sbjct: 351 VVDTKPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVPAAEARGLLIYAFAGEMVE 408
>gi|237716680|ref|ZP_04547161.1| ABC transporter permease [Bacteroides sp. D1]
gi|262405456|ref|ZP_06082006.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|293370445|ref|ZP_06616998.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|294646235|ref|ZP_06723889.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294809097|ref|ZP_06767815.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|298480552|ref|ZP_06998749.1| FeS assembly protein SufD [Bacteroides sp. D22]
gi|229442663|gb|EEO48454.1| ABC transporter permease [Bacteroides sp. D1]
gi|262356331|gb|EEZ05421.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|292634437|gb|EFF52973.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|292638453|gb|EFF56817.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294443651|gb|EFG12400.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|295086249|emb|CBK67772.1| FeS assembly protein SufD, group 1 [Bacteroides xylanisolvens XB1A]
gi|298273373|gb|EFI14937.1| FeS assembly protein SufD [Bacteroides sp. D22]
Length = 447
Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats.
Identities = 93/434 (21%), Positives = 159/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 30 RAAAFADFERLGFPTRKMEKY---KYTDVSKYFEPDYGLN--------------LNRLAI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GVIF + E +HP+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYNRALPKVNLPEGVIFGSLKEVAGQHPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG Y+PK V + + R LII
Sbjct: 133 YGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKPIQLVNILRADVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +N + + +
Sbjct: 193 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENTVFDMYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q +D+ T +
Sbjct: 244 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNHTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 364 LEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|300774695|ref|ZP_07084558.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
gi|300506510|gb|EFK37645.1| FeS assembly protein SufD [Chryseobacterium gleum ATCC 35910]
Length = 444
Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats.
Identities = 83/454 (18%), Positives = 155/454 (34%), Gaps = 38/454 (8%)
Query: 42 RFISAKKNEP------DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
I NE ++ + R A +R+ + P+ Y + ++
Sbjct: 14 EQIIENHNEFLESLRHRFLDDERKTALQRFNNIGFPTKKDEEYKYTNLKEI------TEK 67
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ +++L + + + V +
Sbjct: 68 SYNFFPKENHNITKEQFDELHLGEENFDWIVFVNGKLHKELSKVSIE------------- 114
Query: 156 GVIFMPISEAIC-EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
V F+ + A+ E V + + + + LN A G F+ +PK V +
Sbjct: 115 NVEFLSFNYALNDEKHKEVFEKYFNTIASKEQAFTNLNLAYCKYGFFLKVPKNVVIEKPI 174
Query: 215 STYFR--INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
++ E+ T R L+I +EG+ V +E L +V E+ NA+
Sbjct: 175 HVFYISQNQEENTFYNTRNLLIVEEGAKVEVIESH-HNFDSSYVLTNSVTEIFTYPNAKA 233
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+ +QN + + S + G + + G
Sbjct: 234 DWHKLQN--------DNNTTYLIDNTFAKQEKDSLTTVNTFSFGGKLVRNNLDFIHNGSN 285
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
I I Q +D T + H N S KGI G ++ + GKV V + A
Sbjct: 286 INSFMNGITIIGKDQLVDHHTAVHHNFPNCESYQNYKGIFDGNAHGVFNGKVFVDKIAQK 345
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ + Q +++L+ T P +E H T +++++ LFY RGI ++ A
Sbjct: 346 TNAYQQNNNVLLSEGASIDTKPQLEIFADDVKCSHGCTVGQLNEDALFYLRARGISKKEA 405
Query: 453 IALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
AL++ F + +Q + +E E KL+ LE
Sbjct: 406 QALLLYAFANDAMQNIDIEPLKEKISKLLAEKLE 439
>gi|323467020|gb|ADX70707.1| Iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus helveticus H10]
Length = 425
Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 170/448 (37%), Gaps = 42/448 (9%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
+S + +EP W+ + R A + + P +DF + + D
Sbjct: 9 KLSEENHEPSWLTKRREKAQEQISQLAMPKMEHFHPGDVDFAN--------KSETICTND 60
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+ +E I F + ++ T E+ GV+ + +
Sbjct: 61 ASSENVTEDFETNLI--------------------QFGTDTIQTNLSPEMANKGVVLVDL 100
Query: 163 SEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
EA + PD ++KY T V+ +N A + A G +YIPK V + +
Sbjct: 101 FEAFRDLPDFMRKYFMTEVIKGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQD 160
Query: 222 E-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
K ++ LI+AD S +L+ T + N + +VE++A + +++S+V+
Sbjct: 161 STKKLNWYQHLLIVADSNSSCRFLQHLTTVGEESN-IANMMVEIIAKPGSHVEFSSVEEL 219
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
F R + + W S T L GE S +
Sbjct: 220 SKK--------TTFYFDRHAKIKKDAHVEWAVGLMNSCDTLGEIDSELIGEGSYANSQLV 271
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++++G Q+ ++ + ++T I +G+ S + G + GA S+ Q
Sbjct: 272 SVTSGKQKSFINNRVTNRGPHSTGLINQRGVLLDQSKLIFNGIGQIVHGAHGSKADQQNR 331
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++ + P + + H A+ + + Y + RGIP + A L++ GF
Sbjct: 332 VLMMSPDARGDANPLLLIDENDVIAAHAASVGPVDPVQMNYLMSRGIPYDQAQRLVIRGF 391
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ VL +P + QK+IDI LE +
Sbjct: 392 LGAVLDAVPDKDVR--QKMIDI-LERKL 416
>gi|182415977|ref|YP_001821043.1| FeS assembly protein SufD [Opitutus terrae PB90-1]
gi|177843191|gb|ACB77443.1| FeS assembly protein SufD [Opitutus terrae PB90-1]
Length = 445
Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats.
Identities = 98/445 (22%), Positives = 165/445 (37%), Gaps = 40/445 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W LE + AY + + P R + F + VG V P
Sbjct: 30 PAWWLERKRAAYATFADLPMPK--RTD-ESWRFSTIAGLTLDGFEVG-----RVVPNAPP 81
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
G A V T A+ D V V T A P
Sbjct: 82 VASPFGPAALAFVNNAQVSTGGQPTGALPDGVIVTT--------------LTEAAARHAP 127
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
L + +++ +G +AAL+SA DG+F+Y+P+GV + T F
Sbjct: 128 LLREHFMAQPQQLGSEKFAALHSAFVGDGAFIYVPRGVEVTAPIVVLHAAVGAETAVFPH 187
Query: 231 TLIIADEGSYVSYLEGCTAP---------QRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
TL+IA++ + V+ ++ + QL +L A A++ Y Q+W
Sbjct: 188 TLVIAEDNAKVTVVDYFVSLDSSAQRSALGTQVRQLAVGANDLYAGHGAQLTYIGAQDWS 247
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
+++ + G L+ + E ++
Sbjct: 248 REALSFHLNDT--------IVRRDARVQSLNIHLGGKQARHESLSQLQAPGAFSEMLALT 299
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
++ Q+ D T +H A NT S ++ K S + G + V A + + +
Sbjct: 300 VAEAAQEFDQRTLQIHQAPNTKSDLLYKNALRDRSRTIFSGLIIVDPDAQKTDAYQSNRN 359
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
L++ ++ A+++P +E + + H ATTS+I E FY RGI ++AA L+ GF
Sbjct: 360 LMLSDDAEANSLPGLEIQANDVRCTHGATTSRIDPEQEFYLQSRGIDKKAADELLTFGFF 419
Query: 462 REVLQKLPMEFAVEAQK-LIDISLE 485
EVL +L E +A + LI +
Sbjct: 420 EEVLARLASEPLHDALRTLIQTKFK 444
>gi|167764128|ref|ZP_02436255.1| hypothetical protein BACSTE_02511 [Bacteroides stercoris ATCC
43183]
gi|167698244|gb|EDS14823.1| hypothetical protein BACSTE_02511 [Bacteroides stercoris ATCC
43183]
Length = 447
Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats.
Identities = 90/434 (20%), Positives = 156/434 (35%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ + P + +L I
Sbjct: 30 RAAAFADFERLGFPTRKTEKY---KYTDVSKFFEPDYGLN--------------LNRLEI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + + GVIF + E + P+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPKSHLPEGVIFGSLKEMAEQRPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG +Y+PK V + + R LII
Sbjct: 133 YGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C N L VVE+ +NA + + + +
Sbjct: 193 EEGAQARLL-ACDHAMDSVNFLATQVVEVFVGENATFDFYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S + + + T L GE + +A+++ Q +D+ T +
Sbjct: 244 NSLYVRQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAVADKNQHVDNNTTI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V GA H+ + +L +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPGAQHTSSQQTNRNLCATREAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDESALFYMQQRGISVHEARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|114319888|ref|YP_741571.1| FeS assembly protein SufD [Alkalilimnicola ehrlichii MLHE-1]
gi|114226282|gb|ABI56081.1| Iron-regulated ABC transporter permease protein SufD
[Alkalilimnicola ehrlichii MLHE-1]
Length = 441
Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats.
Identities = 89/421 (21%), Positives = 164/421 (38%), Gaps = 34/421 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL-YYYAAPKSIVGPQSLDDVDPELL 109
PDW+ R A + M P+ + I D L ++ P
Sbjct: 25 PDWLEARRQAAIEAFERMGFPTRRWEAWRNIKLDALLQHHYRP----------------A 68
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
T ++E +A V +D VF S + + L + G+ P+SEA+ E
Sbjct: 69 ETLGVAPQVLQEAISVAPDAPRLVFIDGVF---SPQHSTPDALPE-GLTVKPLSEALDEA 124
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQ 227
V+++L+ + + ALN+A G +V++P+G E+ F ++ G
Sbjct: 125 D--VQQHLAAHADYEQHPFIALNTAFARQGVYVHVPRGQAVEQEVLFIFACSDAGADRAS 182
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+ R L+ A+E + +E P L + V E++A NA ++ +Q
Sbjct: 183 WPRVLVHAEESAECRLIEWHGGP-DGSAYLASPVTEIIAEANANVRLDRLQREGADAFHL 241
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+++ G I+ LL+G + + + + +
Sbjct: 242 G--------AVHAEADRDARVHVQNFNFGGRISRVDYYGLLKGTAAEVIINGLYLGDRKR 293
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D T M H ++ S + KGI + + G + V GA + F + +L++
Sbjct: 294 FTDQHTWMTHDCEHGHSSQLFKGILKDKAEAVFDGLLKVEEGAQKTDGFQENRNLILSPM 353
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
AH+ P +E H +T ++ E +FY RG+ +++A AL+ F EVL +
Sbjct: 354 ALAHSNPRLEIYADDVKCSHGSTVGELDKEAVFYLRSRGMDQDSAQALLTWAFANEVLSE 413
Query: 468 L 468
+
Sbjct: 414 V 414
>gi|213962936|ref|ZP_03391196.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
gi|213954593|gb|EEB65915.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
Length = 433
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 90/438 (20%), Positives = 153/438 (34%), Gaps = 38/438 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A + P + A + L +L T
Sbjct: 21 LNDIRKEALSFFAEKGFP---HKKVEAWKYTSLS-------------------DLQATDY 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS---GVIFMPISEAICEHP 170
L PI + L+ K A+ + V V + E+ G P+ EA+ +
Sbjct: 59 SLWQPIHNKTTLSPEVLHKYAIADCYQLVFVNGYYCPEMSSKEIAGATISPLLEALHKGG 118
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-E 229
+ K + + ALN+A ++G ++ +PKG + + + K T +
Sbjct: 119 EAFIKKYFNTNTEKGDIFTALNTAFTSEGLYIEVPKGKVVDKPIQLLYFNDRKETTCYQP 178
Query: 230 RTLIIADEGSYVSYLE-GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R +I E + + +E L AV E A + Y +QN S
Sbjct: 179 RNIIAVGENAQLKVIEVHQNLSDTATAILTNAVTEAFVAKEAFLDYYKLQNDSLSASLID 238
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S S G +T + +GE ++I G Q
Sbjct: 239 NT--------YISQEANSHASVHTFSFGGTLTRNNLNFYHQGEHLESTLKGLSILKGSQH 290
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D T + H N S K I + + N + GK+ V + A + + Q D++L+ +
Sbjct: 291 TDHYTLVNHAYPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKA 350
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ-- 466
+T P +E H T +S + LFY RGI ++ A AL+ F VL+
Sbjct: 351 TVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEAAALLTYAFANTVLESV 410
Query: 467 KLPMEFAVEAQKLIDISL 484
K+P + +I L
Sbjct: 411 KIPA-LSAYINAIIAEKL 427
>gi|332709645|ref|ZP_08429604.1| Iron-regulated ABC transporter permease protein SufD [Lyngbya
majuscula 3L]
gi|332351472|gb|EGJ31053.1| Iron-regulated ABC transporter permease protein SufD [Lyngbya
majuscula 3L]
Length = 449
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 84/425 (19%), Positives = 148/425 (34%), Gaps = 34/425 (8%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
DW+ E A + P+ + F DL
Sbjct: 30 DWLQELSNHARGIAQELAIPT---TKDEEWRFTDLSPLLQETFEAALAVDTSTL-----D 81
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+ +P L V + + GV ++E E+
Sbjct: 82 ISPVVLPEAMNSRLVFVNGIYAPEQSSVAGLP-----------EGVFVGNLAELPSEYQS 130
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG--QFE 229
+ YL V D + LN+A TD + +++P+ + F G
Sbjct: 131 RIADYLGNQQGVSD-VFTLLNTAGLTDVAVIWLPRNTEVTAPIHLLFVSMADGVPRLFQP 189
Query: 230 RTLIIADEGSYVS----YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
R L++A+ GS +S Y +G A L +V EL +NA + + V
Sbjct: 190 RCLVVAEPGSQLSLVEEYWQGQEANSAQGVYLTNSVTELWVGENARVTHIRV-------- 241
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
G+ V K + S S + G ++ GE + + +
Sbjct: 242 DGESNQAFHVGKSAIAQSRNSFYSCHGVAFGGKLSRHTLEVFQMGEGTETILNGLTAISE 301
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q D+ + ++ N S + K I G ++ + GKVSV + A + +LL+
Sbjct: 302 QQLADTHSAVMLNHPNGISNQLQKCIIDGSAHAVFNGKVSVPQAAQLTNAAQLNRNLLLS 361
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
T P +E + H AT S++ + +FY RG+ E A L+++ FV E++
Sbjct: 362 PKARVDTKPQLEITADNVKCSHGATVSQLEADEVFYLQSRGLKETDARNLLIDAFVAEII 421
Query: 466 QKLPM 470
++P+
Sbjct: 422 NQIPL 426
>gi|329964517|ref|ZP_08301571.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
gi|328524917|gb|EGF51969.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
Length = 447
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 88/433 (20%), Positives = 160/433 (36%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ + P + L ++ ++
Sbjct: 30 RAAAFADFERLGFPTRKQEKYR---YTDVSKFFEPDYGLNLNRL-ELPVNPYEVFK---- 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V ++ V + V + GVIF + E +HP+LVKKY
Sbjct: 82 --------CDVPNMSTSLYFVVNDVFYNKALPKPHLPEGVIFGSLKEMAQQHPELVKKYY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ ++ A N+A DG +Y+PK V + + R LI+ +
Sbjct: 134 GKLADTSEDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVNFLVNRRVLIVLE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ L C N L V+E+ A +NA + + ++
Sbjct: 194 EGAQARLL-ACDHAMDGVNFLATQVIEVFAGENATFDLYEL--------EETHTSTVRIS 244
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 245 NMYVKQEANSNVLLNGMTLHNGTTRNTTRVTLAGEHAELNLCGMAIADKNQHVDNHTAID 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N TS + K + + + G V V A H+ + +L + +T P +
Sbjct: 305 HAVPNCTSNELYKYVLDDQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDAHMYTQPQL 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY QRGIP A L++ FV EV+ + ++
Sbjct: 365 EIYADDVKCSHGATVGQLDESALFYMQQRGIPAREARLLLMFAFVNEVIDTIRLDALKDR 424
Query: 476 AQKLIDISLEGSV 488
L++ G +
Sbjct: 425 LHLLVEKRFRGEL 437
>gi|228471669|ref|ZP_04056442.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
gi|228276822|gb|EEK15517.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
Length = 433
Score = 244 bits (623), Expect = 3e-62, Method: Composition-based stats.
Identities = 89/437 (20%), Positives = 152/437 (34%), Gaps = 36/437 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A ++ P + A + L L T
Sbjct: 21 LKDIRKEALSFFVEKGFP---HKKVEAWKYTSLS-------------------NLQATDY 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS---GVIFMPISEAICEHP 170
L PI + L+ K A+ + V V + E+ G P+ EA+ +
Sbjct: 59 SLWQPIHNKTTLSPEVLHKYAIADCYQLVFVNGYYCPEMSSKEIVGATISPLLEALHKGG 118
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFE 229
+ K + + ALN+A ++G ++ +PKG + YF ++ T
Sbjct: 119 EAFIKKYFNTNTEKGDIFTALNTAFASEGIYIEVPKGKIVDKPIQLLYFNDRKEITCYQP 178
Query: 230 RTLIIADEGSYVSYLE-GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R +I E + + +E L V E A + Y +QN S
Sbjct: 179 RNIIAVGENAQLKVIEVHQNLSDTATAILTNVVTEAFVAKEAFLDYYKLQNDSLTASLID 238
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S S G +T + +GE ++I G Q
Sbjct: 239 NT--------YISQEANSHASVHTFSFGGTLTRNNLNFYHQGEYLESTLKGLSILKGTQH 290
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D T + H N S K I + + N + GK+ V + A + + Q D++L+ +
Sbjct: 291 TDHYTLVNHACPNCESHQDYKSIVSDEATNVFNGKIMVEQIAQKTNAYQQNDNILLSDKA 350
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+T P +E H T +S + LFY RGI ++ A AL+ F VL+ +
Sbjct: 351 TVYTKPQLEIFADDVKCSHGCTVGSLSADSLFYLQTRGIGKKEAAALLTYAFANTVLESV 410
Query: 469 PMEFAVE-AQKLIDISL 484
+ E ++I L
Sbjct: 411 KIPALSEHINQIIAEKL 427
>gi|153809155|ref|ZP_01961823.1| hypothetical protein BACCAC_03465 [Bacteroides caccae ATCC 43185]
gi|149128131|gb|EDM19351.1| hypothetical protein BACCAC_03465 [Bacteroides caccae ATCC 43185]
Length = 449
Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats.
Identities = 92/434 (21%), Positives = 158/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 32 RAAAFADFERIGFPTRKMEKY---KYTDVSKYFEPDFGLN--------------LNRLAI 74
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GVIF + E +HP+LVKKY
Sbjct: 75 PVNPYEVFKCDVPNMSTALYFVVNDAFYDKALPKSHLPEGVIFGSLKEVARQHPELVKKY 134
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+ DG Y+PK V + + R LII
Sbjct: 135 YGKLADTSKDGVTAFNTTFAQDGVIFYVPKNVVVEKPIQLVNILRADVNFMVNRRVLIIL 194
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +N + + +
Sbjct: 195 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENTVFDLYEL--------EETHTSTVRI 245
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q ID+ T +
Sbjct: 246 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHIDNNTSI 305
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 306 DHAVPNCTSNELFKYVLDDQSIGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 365
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + ++
Sbjct: 366 LEIYADDVKCSHGATVGQLDENALFYMRSRGINEKEARLLLMFAFVNEVIDTIRLDALKD 425
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 426 RLHLLVEKRFRGEL 439
>gi|309790995|ref|ZP_07685535.1| FeS assembly protein SufD [Oscillochloris trichoides DG6]
gi|308226968|gb|EFO80656.1| FeS assembly protein SufD [Oscillochloris trichoides DG6]
Length = 402
Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats.
Identities = 84/412 (20%), Positives = 171/412 (41%), Gaps = 16/412 (3%)
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
I D++ A ++ P L + + + P + L+G+ + A
Sbjct: 6 LKDITADEIV--ARSEAAGEPAWLAQRRRDAWNHFLQSVPPEWRRTNLSGLDPEVLVPAA 63
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++ + EL +GV+F ++ A+ H DL++ + V ++ ++AL +A++
Sbjct: 64 APQGTAI--QWDAELAPAGVVFTTMAAALKTHGDLIQAKMDQAVEALEHKFSALRAALWQ 121
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
DG+F+Y+PKGV L + + + F RTL+I +E + + +E + E L
Sbjct: 122 DGAFLYVPKGVAIERPLRVCYTLADSKQAIFPRTLVILEEQASATLIEEFISHDHAEPAL 181
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
+ E+ A + +++ +VQ+W G G + G + WT + G
Sbjct: 182 AGPISEIFAGPGSSLRFVSVQHWGAGVYHIGG--------QKLILGRDANAEWTSVALGG 233
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ L G S + +NG Q + + H+ N S + K +
Sbjct: 234 HVQHIEAEARLEGNGSQVNWLGATFANGAQNLVIAPWLRHVGHNAESFMQFKTVVNDTGY 293
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEATTSKISD 436
+ + G + + + + + +L + + +IP ++ + H +T+ + D
Sbjct: 294 SVFDGMIKIEHESKATSTRLEEHALHLSPDARNDSIPGLKIDTNDVLKGGHASTSGDLDD 353
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
LFY RGI + A +IV GF L ++P+E + + + +EG +
Sbjct: 354 MQLFYMQARGIKRDDAKHMIVMGFFEPALNRIPVE---DLRDELAGIIEGKI 402
>gi|160883924|ref|ZP_02064927.1| hypothetical protein BACOVA_01898 [Bacteroides ovatus ATCC 8483]
gi|156110654|gb|EDO12399.1| hypothetical protein BACOVA_01898 [Bacteroides ovatus ATCC 8483]
Length = 447
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 93/434 (21%), Positives = 159/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 30 RASAFADFERLGFPTRKMEKY---KYTDVSKYFEPDFGLN--------------LNRLAI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + GVIF + E +HP+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEVAEQHPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG Y+PK V + + R LII
Sbjct: 133 YGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +NA + + +
Sbjct: 193 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENAVFDMYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q +D+ T +
Sbjct: 244 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNHTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 364 LEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|227877518|ref|ZP_03995582.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus crispatus JV-V01]
gi|256842990|ref|ZP_05548478.1| FeS assembly protein SufD [Lactobacillus crispatus 125-2-CHN]
gi|256848638|ref|ZP_05554072.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262045957|ref|ZP_06018921.1| FeS assembly protein SufD [Lactobacillus crispatus MV-3A-US]
gi|293379888|ref|ZP_06626003.1| FeS assembly protein SufD [Lactobacillus crispatus 214-1]
gi|227862889|gb|EEJ70344.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus crispatus JV-V01]
gi|256614410|gb|EEU19611.1| FeS assembly protein SufD [Lactobacillus crispatus 125-2-CHN]
gi|256714177|gb|EEU29164.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260573916|gb|EEX30472.1| FeS assembly protein SufD [Lactobacillus crispatus MV-3A-US]
gi|290923549|gb|EFE00437.1| FeS assembly protein SufD [Lactobacillus crispatus 214-1]
Length = 402
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 88/453 (19%), Positives = 167/453 (36%), Gaps = 59/453 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+++ I S + NEP W+ + R ++ + + P R Y +
Sbjct: 2 LSKENILVSSKENNEPSWLTDLRTSSFEKMHKLSYPKMQRFSYQDWPL---------IAK 52
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ + D + + + L
Sbjct: 53 EDFKWQNQPDFFIKK------------------------------------ENHDLLNDK 76
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G+I + AI ++PDLVK L++V+ ++ A + A G F+YIPK ++
Sbjct: 77 GIILCDLFTAIKQYPDLVKSALASVIKNDEDKLTAYHYAYLNSGLFLYIPKNTVLAEPIT 136
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+N LI+ ++ S V +LE + + +VE+VA + +++S
Sbjct: 137 V--TLNPTQDPYISHLLIVTEDNSQVKFLEEI-QNEDKAVKSANLMVEIVAHPGSHVEFS 193
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ R + + W T L GE S
Sbjct: 194 SLDEMDKD--------TTLYFNRRARIENDAHVEWAIAFMNDCNTLGDLDSELIGEGSYA 245
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +IA++ G Q++ ++ + ++T I +G+ S + G + GA S+
Sbjct: 246 DSKAIAVTTGDQRVGINNRVTNRGPHSTGLINQRGVLLENSQLIFNGIGQIVHGAHGSKA 305
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
Q L++ +N P + + H A+ + + Y + RGIP + A L
Sbjct: 306 DQQNRVLMMSDNAHGDANPLLLIDENDVIAAHAASVGPVDQIQMNYLMSRGIPYDQAQRL 365
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ VL +P + QK+IDI LE +
Sbjct: 366 VIRGFLGAVLDAIPNKEVR--QKMIDI-LEKKL 395
>gi|156740327|ref|YP_001430456.1| FeS assembly protein SufD [Roseiflexus castenholzii DSM 13941]
gi|156231655|gb|ABU56438.1| FeS assembly protein SufD [Roseiflexus castenholzii DSM 13941]
Length = 405
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 86/398 (21%), Positives = 178/398 (44%), Gaps = 14/398 (3%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
++ P L + E R + + P + L+ + +V A + S+ E+
Sbjct: 21 SRAADEPAWLTEQRAEAWRFFASVEPPYWRRTDLSKFKPDQVIAAADTAATSLYQE--ED 78
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
L + GV+ +++A+ H L++++L + + + ALN+A++ DG F+Y+PK V
Sbjct: 79 LTEQGVVLTTLAQALHSHETLIRRHLGAAIEPTRHKFLALNAALWKDGVFLYVPKNVSVE 138
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ L+ F + G R LII D+G+ V+++E + + A V E+ +++
Sbjct: 139 LPLTAVFSMPIPGGAIVPRNLIILDDGASVTFVEEYHSIAASDQAFAAPVTEMFLGNDST 198
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+++ VQ W +Y+ ++ G + I W + G+ + L G+
Sbjct: 199 LRFIAVQTWGED-------VYHIGAQKARV-GRGAAIEWAAVNLGARVQHIEAETALEGD 250
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
S E+ + + Q + + + H+ T + + K + S T+ G + + +
Sbjct: 251 GSRVEWVAATFAGDHQNLLTAPWLRHIGAKTEAHMDFKTVVKDQSYTTFDGMIKIEHQSR 310
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEE 450
+ + + +L + + +IP + + H +T+ ++ +E LFY RGIP +
Sbjct: 311 ATVSRLEEHALHLSPKARSDSIPGLMIDTNDVARAGHASTSGEVDEEQLFYMRSRGIPRD 370
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AI LIV GF VL ++P + ++ I +E +
Sbjct: 371 EAIHLIVMGFFEPVLDRIPNDA---LRQRIAEMIEAKI 405
>gi|299147101|ref|ZP_07040168.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
gi|298514986|gb|EFI38868.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
Length = 447
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 94/434 (21%), Positives = 159/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 30 RASAFADFERLGFPTRKMEKY---KYTDVSKYFEPDFGLN--------------LNRLAI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + GVIF + E +HP+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEVAEQHPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG Y+PK V + + R LII
Sbjct: 133 YGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +NA + + +
Sbjct: 193 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENAVFDMYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q ID+ T +
Sbjct: 244 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHIDNHTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 364 LEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|254491895|ref|ZP_05105074.1| FeS assembly protein SufD [Methylophaga thiooxidans DMS010]
gi|224463373|gb|EEF79643.1| FeS assembly protein SufD [Methylophaga thiooxydans DMS010]
Length = 433
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 170/441 (38%), Gaps = 45/441 (10%)
Query: 52 DWMLEWRLLAYRRWLTMKDP-----SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
DW+ R A ++ P W + + + A P S+ QS +
Sbjct: 26 DWLQSLRQQARGQFERQGLPAKKVEDWKYTSLWQLSQESFTHDAKPSSVTKAQSAN---- 81
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
I + L V A + D+ ++G+ P+S ++
Sbjct: 82 ---------VALIEQAHRLVIVDGQFSAELSQLDN-----------LETGLTLSPLSTSL 121
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--G 224
+ +L+ + + V ALN+ + +G+++++ + + + +
Sbjct: 122 DKAENLLNAH----IDVEKPGLNALNTFLMQEGAYLHVAADSKIEKPVEILVINSGETDN 177
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
R L+ ++ S ++ +E + Q + V E+ D A++ + +Q+
Sbjct: 178 LATHLRHLVQLEKNSEITLIEHYVSLQDNV-GFTNVVTEVALADKAKLHHFKLQHESLKH 236
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
I +K + S+ + + G + L GE+S + + +
Sbjct: 237 YH----IATLASK----QAANSEWNTNNISLGGKLARNDIHSQLLGEESHVTLDGLYLLD 288
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G Q +D+ T++ H +TTS V KG+ G S+ + GKV VH+ A + +LL+
Sbjct: 289 GDQHVDNHTRIDHAVPHTTSEEVYKGVMDGESHAVFNGKVIVHKDAQKTDANQSNRNLLL 348
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
C T P +E H +T ++ + LF+ RG+ E +A +L+ F EV
Sbjct: 349 SRTCEIDTKPEMEIYADDVKCGHGSTVGQLDETQLFFLRARGLDEVSARSLLTYAFAVEV 408
Query: 465 LQKLPMEFAVE-AQKLIDISL 484
LQ++ E + +I+ L
Sbjct: 409 LQRIKAEPVRQALSNVIEHRL 429
>gi|91790109|ref|YP_551061.1| FeS assembly protein SufD [Polaromonas sp. JS666]
gi|91699334|gb|ABE46163.1| Iron-regulated ABC transporter permease protein SufD [Polaromonas
sp. JS666]
Length = 447
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 91/434 (20%), Positives = 165/434 (38%), Gaps = 31/434 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ R + P+ +R + + + ++ + + +
Sbjct: 27 WLRRAREAGLASFADTGLPT---LRQEDWKYTSVAAIEKGRFVLATLTPPTPNGVTAQQI 83
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
E +P ++ + + +GV ++E + P+
Sbjct: 84 EDWSLPDTQR-------------LVFVNGHYQPRWSRIAPLPAGVTLASLAELLERDPEC 130
Query: 173 VKKYLS---TVVPVGDNF--YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
++ L P G +AALN+A +DG++V++ GV + F E G
Sbjct: 131 LESLLGPTPHAYPSGCYPSAFAALNAAFMSDGAYVHLAAGVALDTPIHLLFVTTEAGLAV 190
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R L++AD GS S +E A + + +LVA +AEI++ +Q
Sbjct: 191 QTRNLVVADAGSRASLIEHHVAVG-EGAYFTNVITDLVAGRDAEIEHHKLQQESLKAFH- 248
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
V + S+ + G+ + L E + + +++G Q
Sbjct: 249 -------VAAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGRQ 301
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
ID T++ H + TSR KG+ AG S + GKV VH A HS +LL+ +N
Sbjct: 302 HIDHHTRIDHARPHGTSREFYKGVLAGASRAVFNGKVIVHADAQHSDADQTNRNLLLSDN 361
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H AT ++ E +FY RG+ + +A AL+ F EV+ +
Sbjct: 362 AEVDTKPQLEIYADDVKCSHGATVGQLDPEQIFYLRSRGVDDASARALLTFAFAEEVVDR 421
Query: 468 LPM-EFAVEAQKLI 480
+ + +KL+
Sbjct: 422 VGIAPLRARLEKLL 435
>gi|260172448|ref|ZP_05758860.1| ABC transporter permease [Bacteroides sp. D2]
gi|315920742|ref|ZP_07916982.1| ABC transporter permease [Bacteroides sp. D2]
gi|313694617|gb|EFS31452.1| ABC transporter permease [Bacteroides sp. D2]
Length = 447
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 94/434 (21%), Positives = 159/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 30 RASAFADFERLGFPTRKMEKY---KYTDVSKYFEPDFGLN--------------LNRLAI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + GVIF + E +HP+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEVAEQHPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG Y+PK V + + R LII
Sbjct: 133 YGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +NA + + +
Sbjct: 193 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENAIFDMYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE S +AI++ Q +D+ T +
Sbjct: 244 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGSEINLCGMAIADKNQHVDNHTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 364 LEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|260102730|ref|ZP_05752967.1| FeS assembly protein SufD [Lactobacillus helveticus DSM 20075]
gi|111610266|gb|ABH11633.1| putative ABC transporter ABC5MC5 [Lactobacillus helveticus CNRZ32]
gi|260083469|gb|EEW67589.1| FeS assembly protein SufD [Lactobacillus helveticus DSM 20075]
Length = 425
Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 169/448 (37%), Gaps = 42/448 (9%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
+S + +EP W+ + R A + + P +DF + + D
Sbjct: 9 KLSEENHEPSWLTKRREKAQEQISQLAMPKMEHFHPGDVDFAN--------KSETICTND 60
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+ +E I F + ++ T E+ GV+ + +
Sbjct: 61 ASSENVTEDFETNLI--------------------QFGTDTIQTNLSPEMANKGVVLVDL 100
Query: 163 SEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
EA + PD ++KY T V+ +N A + A G +YIPK V + +
Sbjct: 101 FEAFRDLPDFMRKYFMTEVIKGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQD 160
Query: 222 E-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
K ++ LI+AD S +L+ T + N + +VE++A + +++S+V+
Sbjct: 161 STKKLNWYQHLLIVADSNSSCRFLQHLTTVGEESN-IANMMVEIIAKPGSHVEFSSVEEL 219
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
F R + + W S T L GE S +
Sbjct: 220 SKK--------TTFYFDRHANIEKDAHVEWAVGLMNSCDTLGEIDSELVGEGSYANSQLV 271
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++++ Q+ ++ + ++T I +G+ S + G + GA S+ Q
Sbjct: 272 SVTSDKQKYFINNRVTNRGPHSTGLINQRGVLLDQSKLIFNGIGQIVHGAHGSKADQQNR 331
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++ + P + + H A+ + + Y + RGIP + A L++ GF
Sbjct: 332 VLMMSPDARGDANPLLLIDENDVIAAHAASVGPVDPVQMNYLMSRGIPYDQAQRLVIRGF 391
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ VL +P + QK+IDI LE +
Sbjct: 392 LGAVLDAVPDKDVR--QKMIDI-LERKL 416
>gi|161507125|ref|YP_001577079.1| hypothetical protein lhv_0622 [Lactobacillus helveticus DPC 4571]
gi|160348114|gb|ABX26788.1| hypothetical protein lhv_0622 [Lactobacillus helveticus DPC 4571]
Length = 425
Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 169/448 (37%), Gaps = 42/448 (9%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
+S + +EP W+ + R A + + P +DF + + D
Sbjct: 9 KLSEENHEPSWLTKRREKAQEQISQLTMPKMEHFHPGDVDFAN--------KSETICTND 60
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+ +E I F + ++ T E+ GV+ + +
Sbjct: 61 ASSENVTEDFETNLI--------------------QFGTDTIQTNLSPEMANKGVVLVDL 100
Query: 163 SEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
EA + PD ++KY T V+ +N A + A G +YIPK V + +
Sbjct: 101 FEAFRDLPDFMRKYFMTEVIKGDENKLNAEHLAYLNSGILLYIPKNVVLDDPIEVKLIQD 160
Query: 222 E-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
K ++ LI+AD S +L+ T + N + +VE++A + +++S+V+
Sbjct: 161 STKKLNWYQHLLIVADSNSSCRFLQHLTTVGEESN-IANMMVEIIAKPGSHVEFSSVEEL 219
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
F R + + W S T L GE S +
Sbjct: 220 SKK--------TTFYFDRHAKIEKDAHVEWAVGLMNSCDTLGEIDSELVGEGSYANSQLV 271
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++++ Q+ ++ + ++T I +G+ S + G + GA S+ Q
Sbjct: 272 SVTSDKQKYFINNRVTNRGPHSTGLINQRGVLLDQSKLIFNGIGQIVHGAHGSKADQQNR 331
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++ + P + + H A+ + + Y + RGIP + A L++ GF
Sbjct: 332 VLMMSPDARGDANPLLLIDENDVIAAHAASVGPVDPVQMNYLMSRGIPYDQAQRLVIRGF 391
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ VL +P + QK+IDI LE +
Sbjct: 392 LGAVLDAVPDKDVR--QKMIDI-LERKL 416
>gi|237720412|ref|ZP_04550893.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450163|gb|EEO55954.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 447
Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats.
Identities = 92/434 (21%), Positives = 159/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 30 RASAFADFERLGFPTRKMEKY---KYTDVSKYFEPDFGLN--------------LNRLAI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + GVIF + E +HP+LVK+Y
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDTFYNRALPTGNLPEGVIFGSLKEVAEQHPELVKEY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG Y+PK V + + R LII
Sbjct: 133 YGQLADTSKDGVTAFNTAFAQDGVVFYVPKNVVVEKTIQLVNILRADVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +NA + + +
Sbjct: 193 EDGAQARLLI-CDHAMDNVNFLATQVIEVFAGENAVFDMYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q +D+ T +
Sbjct: 244 SNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNHTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 364 LEIYADDVKCSHGATVGQLDEGALFYMRSRGIAEKEARLLLMFAFVNEVIDTIRLEALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|313147911|ref|ZP_07810104.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
gi|313136678|gb|EFR54038.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
Length = 447
Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats.
Identities = 97/441 (21%), Positives = 163/441 (36%), Gaps = 29/441 (6%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
EP M R A+ + P+ + +Y + D+ + P + L P +
Sbjct: 24 EP--MNAPRAAAFADFERQGFPTRKQEKY---KYTDVSKFFEPDYGLNLNRL----PIPV 74
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
YE + V DA ++ + E GVIF + E +H
Sbjct: 75 NPYEVFKCDVPNMS----TSLFFVVNDAFYNQALPKSGLPE-----GVIFGGLREMAEQH 125
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQF 228
P+LVKKY + + A N+A DG +Y+PK V + +
Sbjct: 126 PELVKKYYGKLADTSKDAVTAFNTAFTQDGVLMYVPKNVVVDKPIQLVNILRADVNFMVN 185
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R LII +EG+ L C + N L V+E+ A +N+ + +
Sbjct: 186 RRVLIILEEGAQARLLV-CDHAMDNVNFLATQVIEVFAEENSVFDLYEL--------EET 236
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ +G S + + + T L GE + +AI++ Q
Sbjct: 237 HTSTVRFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQH 296
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+ T + H N TS + K + S + G V V A H+ + +L +
Sbjct: 297 VDNNTSIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDA 356
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+T P +E H AT ++ + LFY RGI E+ A L++ FV EV+ +
Sbjct: 357 RMYTQPQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTI 416
Query: 469 PME-FAVEAQKLIDISLEGSV 488
+E L++ G +
Sbjct: 417 RLEALKDRLHLLVEKRFRGEL 437
>gi|282900437|ref|ZP_06308387.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
gi|281194750|gb|EFA69697.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
Length = 461
Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 159/448 (35%), Gaps = 46/448 (10%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQ-SLDDVDPE 107
EP W+ + R A + P+ R F DL +G + E
Sbjct: 37 KEPSWLEQVRTNATKWVRHSVIPT---TRDEEWRFTDLSPLREISFALGSNLGSSQIAME 93
Query: 108 LLRTYEKLGIPIREQE--ILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E LG+P + GV T ++ + S V
Sbjct: 94 SFMDMEGLGLPEATHRLVFINGVLTPTLSQTSDLPSGLHVGN------------------ 135
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ D V + + ++ LN+A +D + V+ K V + F
Sbjct: 136 LNSLEDSVAQKYLAQFDGTRDVFSDLNTAGLSDVAVVWARKNVVVEDPIQLLFISLVGEF 195
Query: 226 GQF--ERTLIIADEGSYVSYLEGC----------TAPQRDENQLHAAVVELVALDNAEIK 273
F R L+IA+ S +S +E + + +V E+ +NA+I
Sbjct: 196 PTFCQPRCLVIAEGNSQISLIEEHITLNTPSPQNNPSPGLNSGFNNSVTEIWVHENAQIN 255
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+S + GD G K + S+ S + G I+ + GEQ+
Sbjct: 256 HSRI--VLGGDHSFDIG------KTAVTQARYSRYSCNAITIGGKISRHNLELVQTGEQT 307
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ + Q D+ + + TS+ + K I ++ + GK+ V + A +
Sbjct: 308 ETNLNGLTVIAQKQLGDTHSAIALNYPYATSKQLHKLIIGDRAHGVFNGKIFVPKSAQLT 367
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+LL+ + T P +E + H AT S++ D+ +FY RGI E A
Sbjct: 368 DASQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLQDDEIFYLQSRGIGETEAR 427
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLID 481
L+VN F EV+ +P+ E KL+
Sbjct: 428 KLLVNAFATEVINLIPLASLRE--KLLK 453
>gi|329954148|ref|ZP_08295243.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
gi|328528125|gb|EGF55105.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
Length = 447
Score = 243 bits (620), Expect = 6e-62, Method: Composition-based stats.
Identities = 91/434 (20%), Positives = 156/434 (35%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ + P + LD I
Sbjct: 30 RAAAFADFERLGFPTRKTEKY---KYTDVSKFFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + + GVIF + + +HP+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDAFYGKALPKSHLPEGVIFGSLKDMAEQHPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG +Y+PK V + + R LII
Sbjct: 133 YGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C N L VVE +NA + + + +
Sbjct: 193 EEGAQARLL-ACDHAMDGVNFLATQVVEAFIGENATFDFYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 244 SSLYVRQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAIADKNQHVDNNTTI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATREAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDESALFYMRQRGISMREARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|154253698|ref|YP_001414522.1| FeS assembly protein SufD [Parvibaculum lavamentivorans DS-1]
gi|154157648|gb|ABS64865.1| FeS assembly protein SufD [Parvibaculum lavamentivorans DS-1]
Length = 437
Score = 243 bits (620), Expect = 6e-62, Method: Composition-based stats.
Identities = 91/433 (21%), Positives = 153/433 (35%), Gaps = 31/433 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ R A + ++ P R + DL Q LD +
Sbjct: 26 WLSRRRETALKAFMEAGLP---HRRLEEWKYTDLR-----------QVLDKAAFASAPAH 71
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH--P 170
E I A + V V S + L K GV P+++A+ E
Sbjct: 72 EGAVILPEGGAAAAFAAIDRYTVVFVNGSYRADLSNTARLPK-GVELRPLADAVPEQWAK 130
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
DLV++ L LN+A+ +DG+ + I GV+ L F + G R
Sbjct: 131 DLVERRLDDARQAE--GVVDLNTALMSDGTCLRIRSGVKLDKPLHLLFVTADAGAS-HAR 187
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+ ++ + + E V ++ + A + + +Q+ PG
Sbjct: 188 NLILLEKEAEATIFE---THIGSAAGFSDIVTDIALAECARLDHLKLQDEAPGA------ 238
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ T R + + L G ++ GE + Q D
Sbjct: 239 -VHLATMRTSLEA-NAYFASFTLTLGCGVSRGQNFVRFAGEGAKAHVNGAYALKDKQHSD 296
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ H TS + KG+ G S ++GKV V A + +LL+ +
Sbjct: 297 QFCVIDHAVPGCTSHTLFKGVLDGSSEGVFQGKVIVRPHAQKTDGRQMTQALLLSRDAAM 356
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+ P +E H +T ++S + +FY RGIPE A L+++ F+ E L +P
Sbjct: 357 NAKPELEIYADDVQCAHGSTVGELSRDAIFYLRSRGIPELQARQLLISAFLDESLDLVPH 416
Query: 471 EFAVEAQKLIDIS 483
E A +A K +
Sbjct: 417 EAARDALKSLTAE 429
>gi|113477761|ref|YP_723822.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
gi|110168809|gb|ABG53349.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
Length = 453
Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats.
Identities = 84/457 (18%), Positives = 164/457 (35%), Gaps = 37/457 (8%)
Query: 23 FETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAID 82
F + ++++ K ++ I S W+ + R A + P+ +
Sbjct: 10 FYLDKLLEESCKKVSPAIASDFSLDVKMAAWLQQVRDRAAAWVRELSIPT---KKDEEWR 66
Query: 83 FDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSV 142
F +L + + +P L V + +
Sbjct: 67 FTNLS-----SMMKLSFQAPTLVDLDALNIAPFILPEVADSRLVFVNGVFAPQLSEVKGI 121
Query: 143 SVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFV 202
++ V + + E+ V YL+ P + + LN+A TD + V
Sbjct: 122 -----------ENQVFVGNLGQLPEEYQKRVGNYLAQ-QPGSEEVFTCLNTAGLTDAAVV 169
Query: 203 YIPKGVRCPMELSTYFRINEKGTGQF--ERTLIIADEGSYVSYLEGC-------TAPQRD 253
++PK + F E R L++A+ S +E C
Sbjct: 170 WLPKNQVLEKPIHLLFIATETEIPILTQRRCLVVAESNSSGKIIEHCVTAEVICPEAPNS 229
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
L V E+ +NAEI ++ VQ + K + S+ + +
Sbjct: 230 HPYLTNTVTEIWVEENAEIDHTRVQRDAGAAFH--------IGKTAIAQAKNSRYTCNAI 281
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G ++ + GE + Y +A Q+ID+ + + N+ + + K I
Sbjct: 282 NLGGRLSRHNLEVVQMGEGTETNLYGLAFLRNEQEIDTHSSITLNYPNSVTDQLYKCIVD 341
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+++ + GK+ V + A + +LL+ + T P +E + H AT S+
Sbjct: 342 DKAHSIFNGKIYVSQTAQLTNAAQLNRNLLLSSGGRVDTKPQLEIIADNVQCSHGATVSQ 401
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+ D+ +FY RG+ +EA+ L+++ F E+L KLP+
Sbjct: 402 LDDDEVFYLQSRGLSQEASRNLLIDAFAAEILNKLPL 438
>gi|255010113|ref|ZP_05282239.1| putative ABC transporter protein [Bacteroides fragilis 3_1_12]
Length = 451
Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats.
Identities = 97/441 (21%), Positives = 163/441 (36%), Gaps = 29/441 (6%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
EP M R A+ + P+ + +Y + D+ + P + L P +
Sbjct: 28 EP--MNAPRAAAFADFERQGFPTRKQEKY---KYTDVSKFFEPDYGLNLNRL----PIPV 78
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
YE + V DA ++ + E GVIF + E +H
Sbjct: 79 NPYEVFKCDVPNMS----TSLFFVVNDAFYNQALPKSGLPE-----GVIFGGLREMAEQH 129
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQF 228
P+LVKKY + + A N+A DG +Y+PK V + +
Sbjct: 130 PELVKKYYGKLADTSKDAVTAFNTAFTQDGVLMYVPKNVVVDKPIQLVNILRADVNFMVN 189
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R LII +EG+ L C + N L V+E+ A +N+ + +
Sbjct: 190 RRVLIILEEGAQARLLV-CDHAMDNVNFLATQVIEVFAEENSVFDLYEL--------EET 240
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ +G S + + + T L GE + +AI++ Q
Sbjct: 241 HTSTVRFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQH 300
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+ T + H N TS + K + S + G V V A H+ + +L +
Sbjct: 301 VDNNTSIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDA 360
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+T P +E H AT ++ + LFY RGI E+ A L++ FV EV+ +
Sbjct: 361 RMYTQPQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTI 420
Query: 469 PME-FAVEAQKLIDISLEGSV 488
+E L++ G +
Sbjct: 421 RLEALKDRLHLLVEKRFRGEL 441
>gi|83814449|ref|YP_445509.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
gi|83755843|gb|ABC43956.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
Length = 446
Score = 243 bits (619), Expect = 7e-62, Method: Composition-based stats.
Identities = 81/412 (19%), Positives = 154/412 (37%), Gaps = 28/412 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLY-YYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A R+ + P+ A + ++ P ++ +DP + +
Sbjct: 38 REDAIERFAQLGIPT---NDLEAWKYTNISKTIDRPYTLSLSPEGPSLDPSDIAPFTIDE 94
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ ++ G ++ S GV+ +++A EHPD+V+++
Sbjct: 95 MDAHRVVLVNGHVDESLSDIGDLPS--------------GVVLSSLAQAGEEHPDIVEEH 140
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-NEKGTGQFERTLIIA 235
D ALN+A DG+F+Y+P G + + R L +
Sbjct: 141 YGQYADFEDEALTALNTAFVQDGAFIYVPSGTIVEKPIFFLHVTAGSEPLFLQPRHLFVV 200
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ +E + V E + A +++ VQ+ SQ V
Sbjct: 201 EDGAIAKVVEA-QHSVTEAQTFTNTVSEAFVGERANLEHYLVQDEGANASQ--------V 251
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
R + S S + + + + G Y + I +D+ T+M
Sbjct: 252 HTRAGQQEDDSVYSTNTITFSGEVVRNNATIEVNGSFCESNLYGLCIGKDEMHVDNHTQM 311
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+ + +S + K + S + GKV V RG+ + Q D++++ + +T P
Sbjct: 312 NHVQPDCSSNELYKHVLNDESTAVFNGKVLVTRGSQRIDAYQQNDTIVLTTDANIYTKPE 371
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+E H ATT ++ +E +FY RG+ E A L++ F EVL +
Sbjct: 372 LEIYADDVVCSHGATTGQVDEEGVFYLRSRGLSERRAHILMLQAFTDEVLSE 423
>gi|160887875|ref|ZP_02068878.1| hypothetical protein BACUNI_00278 [Bacteroides uniformis ATCC 8492]
gi|317477850|ref|ZP_07937036.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
gi|156862561|gb|EDO55992.1| hypothetical protein BACUNI_00278 [Bacteroides uniformis ATCC 8492]
gi|316905986|gb|EFV27754.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
Length = 447
Score = 243 bits (619), Expect = 7e-62, Method: Composition-based stats.
Identities = 93/434 (21%), Positives = 160/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ + P + +L I
Sbjct: 30 RAAAFADFERLGFPTRKEEKY---KYTDISKFFEPDYGLN--------------LNRLEI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GVIF + E +HPDLVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYGRALPKSHLPEGVIFGSLKEVAEKHPDLVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ ++ A N+A DG Y+PK V + + R LII
Sbjct: 133 YGKLADTAEDGVTAFNTAFAQDGVLFYVPKNVVVEKPIQLVNILRGDVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C N L V+E+ A +NA + + + +
Sbjct: 193 EEGAQARLLV-CDHAMDGVNFLATQVIEIFAGENAIFDFYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 244 SNMYVRQEANSNVLLNGMTLHNGTTRNTTCVTLAGEHAELNLCGMAIADKNQHVDNHTTI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + + + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELYKYVLDEQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGIP A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDESALFYMRQRGIPVREARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|317474555|ref|ZP_07933829.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
gi|316909236|gb|EFV30916.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
Length = 447
Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats.
Identities = 89/434 (20%), Positives = 156/434 (35%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ + P + LD I
Sbjct: 30 RAAAFADFERLGFPTRKVEKY---KYTDVSKFFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + + GVIF + E HP+LV+KY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPKSHLPEGVIFGSLKEMADRHPELVRKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG +Y+PK V + + R L+I
Sbjct: 133 YGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRADVNFMVNRRVLVIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C N L V+E+ +NA + + + +
Sbjct: 193 EEGAQARLL-ACDHAMDSVNFLATQVIEVFVGENATFDFYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 244 SALYVKQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAIADKNQHVDNNTTI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATREAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDESALFYMQQRGISMREARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|315022125|gb|EFT35154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
Length = 427
Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats.
Identities = 77/430 (17%), Positives = 148/430 (34%), Gaps = 30/430 (6%)
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A R+L+ PS Y + +L + PQ + E L+ G
Sbjct: 20 LNALERFLSKGFPSKKDEEY---KYTNLKEIIEKQYQFLPQEEHHISEEELKALRLGGED 76
Query: 119 IREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS 178
++ G +++ + D L V+ +EA+
Sbjct: 77 FDWVVLVNGKLRPELSKISDKDIKV--------LALDEVLSSGENEALFRP-------YF 121
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLIIAD 236
+ + LN A G +Y+PK + ++ + T R +++ +
Sbjct: 122 NTISNESWAFPNLNLAFAHLGVALYVPKNTVVEKPIHIFYISQNQSENTFYNPRNILVVE 181
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
GS + +E ++ E+ NA+ + +QN V
Sbjct: 182 AGSQIEVIESH-HNFDTSFTFTNSLTEIFTKPNAKADWHKLQN--------DTDTSYLVD 232
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + G + + GE I I Q +D T +
Sbjct: 233 HTFVKQERDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQLVDHHTAVH 292
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N S KG+ ++ + GKV V + A + + Q +++L+ + P +
Sbjct: 293 HNQPNCESYQNYKGVFKDNAHGVFNGKVFVDKIAQKTNAYQQNNNILLSEGATIDSKPQL 352
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H T +++++ LFY RGI + A AL++ F + ++ + +E ++
Sbjct: 353 EIFADDVKCSHGCTVGQLNEDALFYLRARGISKNEAQALLLYAFANDAMENIDIEPLKLK 412
Query: 476 AQKLIDISLE 485
KL+ LE
Sbjct: 413 ISKLLAEKLE 422
>gi|149278439|ref|ZP_01884576.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
gi|149230809|gb|EDM36191.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
Length = 435
Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats.
Identities = 63/434 (14%), Positives = 158/434 (36%), Gaps = 26/434 (5%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ R ++ + P+ + + ++ + D L E
Sbjct: 22 LAALRAGSFGTFDQKGFPT---TKLEEWKYTNIS--SLFDKEYQISPFTDNPASLAAAIE 76
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
++ +P V+ ++ + + +++ V+ + + A +++
Sbjct: 77 EIQLPEHTN------ANVLYFVNGRYEPSL--SIIRSTIEELQVMPL-LQAASAGFQEII 127
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERT 231
++L + ALN++ TD F+++ G + Y + + R+
Sbjct: 128 DQHLGESSVYLKDGIHALNTSFITDAVFIHVAAGKELSHPVYIYHLADAQHQAILTQPRS 187
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+ + + + E + AV+E+V +A ++Y +QN +
Sbjct: 188 LVYVSKRAKIQIAE-TFRTVGTMDSFSNAVMEVVVAQDAFLEYYKLQN---DAAHTSQVS 243
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + G +S + + + + +L E + Y +++ G +D+
Sbjct: 244 STHIHQTG-----KSHVHTVTISLNGGLLRNNLNMILDAEGNETHLYGLSLLKGKTHVDN 298
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + + N S + K I+ + + G++ V A + + ++++ + +
Sbjct: 299 HTLIDNKHPNCFSNQLYKNIADDAATGVFSGRIIVQPDAQKTNAYQSNKNIILSDQATIN 358
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E H T ++ +E LFY RGI E A L++ F ++++++ +E
Sbjct: 359 AKPQLEIFADDVKCSHGCTVGQLDEEALFYLRARGISRELAEVLLLQAFATDIVEQVKIE 418
Query: 472 FAVE-AQKLIDISL 484
+ LI L
Sbjct: 419 PLRQHIDTLIQQHL 432
>gi|325299865|ref|YP_004259782.1| FeS assembly protein SufD [Bacteroides salanitronis DSM 18170]
gi|324319418|gb|ADY37309.1| FeS assembly protein SufD [Bacteroides salanitronis DSM 18170]
Length = 447
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 86/433 (19%), Positives = 158/433 (36%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + ++ Y AP + L + ++
Sbjct: 30 RAKAFADFERLGFPTRKQEKY---KYTEVGKYFAPDFGLNLNRL-EFPVNPYEVFK---- 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V ++ V + GV+F + E +HPDL+K +
Sbjct: 82 --------CDVPNMSTSLYFVINDSFDKHDHPSAQLPEGVLFGSLKELAVQHPDLIKNHY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ + A N+ DG +Y+PK V + + T R LII +
Sbjct: 134 GKLADTSKDGLTAFNTMFAQDGVLMYVPKNVVIEKPIQLVNILRADVDTLSNRRLLIILE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ L C + N L V E+ +NA + + +
Sbjct: 194 EGAQAKLLV-CDHAMDNVNFLSTQVTEVFVGENAYFDLYEL--------EETHNSTVRFS 244
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ + S + + + T L G + +AI++ +QID+ T +
Sbjct: 245 QLFVEQQAGSNVLLNGMTLHNGTTRNTTEVQLVGRGAEISLCGMAIADKNEQIDNHTTID 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + TS + K + + + GKV V GA H+ + ++ +T P +
Sbjct: 305 HKVPDCTSNELFKYVLDDQAVGAFAGKVLVREGAQHTSSQQTNRNICATREARMYTQPQL 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY QRGIP + A L++ FV EV+ + M+
Sbjct: 365 EIYADDVKCSHGATVGQLDENALFYMQQRGIPLKEARLLLMFAFVNEVIDYIRMDALKDR 424
Query: 476 AQKLIDISLEGSV 488
+L++ G +
Sbjct: 425 LHRLVEKRFRGEL 437
>gi|254413288|ref|ZP_05027059.1| FeS assembly protein SufD [Microcoleus chthonoplastes PCC 7420]
gi|196179908|gb|EDX74901.1| FeS assembly protein SufD [Microcoleus chthonoplastes PCC 7420]
Length = 452
Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats.
Identities = 81/425 (19%), Positives = 150/425 (35%), Gaps = 34/425 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + P+ R F DL A + L L
Sbjct: 38 QLRDQAAAIVEELAMPT---RRDEEWRFTDLSPLLAVNFQGVEAFFEQFLQHL--DLTSL 92
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+P L V + + GV ++ + + +
Sbjct: 93 TLPETPDSRLVFVNGVYAPDLSSVRGLP-----------EGVYVGNLAGLPNAYQERIPN 141
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTLI 233
YL D +AALN++ TD + V+IPK + F R L+
Sbjct: 142 YLGKQQAASD-VFAALNTSGLTDAAVVWIPKATIVETPIHLLFISTTDDVPVICQPRCLV 200
Query: 234 IADEGSYVSYLEGCTAPQRDEN-------QLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+A+ GS V+ +E A + V E+ D+A++ ++ Q
Sbjct: 201 VAEPGSVVNLIEHYAANVEGCPDIPVNRPYFNNQVTEIWIEDDAQVIHTRNQREAIDGFH 260
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ K + S+ + + G+ ++ + GE + + + G
Sbjct: 261 --------IGKTAVTQARNSRYTCNAISLGARLSRHNLEIVQTGEATETTLKGLTMIGGE 312
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q D+ + +L + + + K I ++ + GKV V + A + +LL+
Sbjct: 313 QVADTHSAVLLNHPHGMTNQLHKCIIDDRAHGVFNGKVFVPQAAQFTNAAQLNRNLLLSA 372
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+T P +E H AT S++ E +FY RG+ E A L+++ FV E+LQ
Sbjct: 373 KARVNTKPQLEITADQVKCSHGATVSQLDPEDVFYLQSRGLNETNARNLLIDAFVAEILQ 432
Query: 467 KLPME 471
++P++
Sbjct: 433 RIPVD 437
>gi|257388959|ref|YP_003178732.1| SufBD protein [Halomicrobium mukohataei DSM 12286]
gi|257171266|gb|ACV49025.1| SufBD protein [Halomicrobium mukohataei DSM 12286]
Length = 403
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 102/434 (23%), Positives = 186/434 (42%), Gaps = 59/434 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L + + IS + +EP+W+LE RL AY ++ P R P D+ +L
Sbjct: 9 LTAEQVTQISEELDEPEWLLETRLDAYEALDSLDMPDVIRT--PGRDWTNLD-------- 58
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
YE L P+ K+ +
Sbjct: 59 -------------ALDYETLVDPLE------------------------WEQEKDRVDAE 81
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
V + ++A+ +H +L++ ++V ++ AL++A+F+ G+ VY+P+GV
Sbjct: 82 SVDVLSWADALEQHGELIEAQFGSIVDPQRDYLTALSTALFSAGTVVYVPEGVDAED--- 138
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA-PQRDENQLHAAVVELVALDNAEIKY 274
R F TL++A+E S V+ LE T D Q ++ VVE+ A +N+ ++Y
Sbjct: 139 VKIRTTMNSRSLFNYTLVVAEESSSVTILERQTTGTNVDGEQYYSGVVEVAAEENSSVQY 198
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
T+QN YNF KRG + + W + GS +T L G+ S
Sbjct: 199 GTLQNLDDDS-------YNFQVKRGHA-DTYATVDWIEGNIGSRLTKSNVETRLLGDASE 250
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + Q D +++ H A++TT+ +V++G+ + + Y G V R A +
Sbjct: 251 SQIVGAFFGHEDQHFDIASRVWHEAEHTTADLVTRGVLDDAARSVYEGVQDVGREAWDTN 310
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
++ + ++L++ + A P + N H AT ++ +E +FY R + E+A
Sbjct: 311 SYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQVDEEDMFYMTSRSVDPESAEN 370
Query: 455 LIVNGFVREVLQKL 468
++V GF V +++
Sbjct: 371 MLVEGFFVPVFEEI 384
>gi|218131829|ref|ZP_03460633.1| hypothetical protein BACEGG_03450 [Bacteroides eggerthii DSM 20697]
gi|217986132|gb|EEC52471.1| hypothetical protein BACEGG_03450 [Bacteroides eggerthii DSM 20697]
Length = 447
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 89/434 (20%), Positives = 156/434 (35%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ + P + LD I
Sbjct: 30 RAAAFADFERLGFPTRKVEKY---KYTDVSKFFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + + GVIF + E HP+LV+KY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPKSHLPEGVIFGSLKEMADRHPELVRKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG +Y+PK V + + R L+I
Sbjct: 133 YGKLADTSKDGVTAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRADVNFMVNRRVLVIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C N L V+E+ +NA + + + +
Sbjct: 193 EEGAQARLL-ACDHAMDSVNFLATQVIEVFVGENATFDFYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 244 SALYVKQEANSNVLLNGMTLHNGTTRNTTEVTLAGEGAELNLCGMAIADKNQHVDNNTTI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATCEAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDESALFYMQQRGISMREARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|288800581|ref|ZP_06406039.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332794|gb|EFC71274.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
Length = 461
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 94/461 (20%), Positives = 178/461 (38%), Gaps = 34/461 (7%)
Query: 37 NEDIIRFISAKKN------EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYA 90
+E I+ A++N P M R A + + + P RY D ++
Sbjct: 18 SEQYIQLFEAEQNLLCQNSAPA-MNAKRAEALQHFKQLGIPQRKDERYKYTDMQAIF--- 73
Query: 91 APKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKE 150
AP + + E+ V AV + + V V + +
Sbjct: 74 APDYGLNLHRMPFSF-------------RPEEVFSCDVPNLSTAVYFLMNDVFDVNSLPK 120
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
GV+ + E ++PD ++KY + + + AALN+ + DG VY+PK +
Sbjct: 121 GHLPEGVVVDSLKEYALKNPDFIEKYYAKLAATDKDGIAALNTMLAQDGLLVYVPKNTKV 180
Query: 211 PMELSTYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
+ + R LI+ + G+ V L C D N L V+E +N
Sbjct: 181 EKTIQVINIMRSDVDLMLNRRVLIVVEPGAEVKMLF-CDHTANDRNYLATQVIEAYVGEN 239
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A + ++ + + + + S+++ + + +T S
Sbjct: 240 ASLDLYCMEETSYNNKRVSNAYF--------DQASNSRLTHHVITLHNGVTRNTTSLRFS 291
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
GE + Y I++ Q +D+ T + H + TS + K + G S + G+V V +
Sbjct: 292 GEGAECNLYGCVIADKQQHVDNNTLIDHAVPHCTSNELYKYVLDGHSTGAFAGRVLVQKD 351
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A + + + ++ + ++ P +E H +T +++D LFY QRGI E
Sbjct: 352 AQKTSSEERNQNICVTKEARMYSQPELEIYADDVKCAHGSTVGQLNDAALFYMRQRGISE 411
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLEGSVG 489
+ A L+ F+ EV+ ++ +E E L++ G +G
Sbjct: 412 KEAKFLLEFAFINEVVDQIKLEPLRERLHHLVEKRFRGELG 452
>gi|255534221|ref|YP_003094592.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
gi|255340417|gb|ACU06530.1| Iron-sulfur cluster assembly protein SufD [Flavobacteriaceae
bacterium 3519-10]
Length = 436
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 158/436 (36%), Gaps = 32/436 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
++ E R+ A + +L M P+ Y + ++ +
Sbjct: 22 FLDENRVFALQNFLQMGLPTKKDEEYKYTNLREI------TEKSYNFFPKEAHNISKEKI 75
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
E+L + + + V V+ ++ V F+ + A+ +
Sbjct: 76 EELHLGEENFDWIVFVNG-------------VLHKELSKISIENVEFLSFNYALNDPKHK 122
Query: 173 -VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFE 229
V ++ + D + LN+A G F+ +PK V + ++ ++ T
Sbjct: 123 EVFEHYFNTIAAKDLAFTNLNTAYCKQGFFLKVPKNVVIEKPVHVFYLSQNQDENTIYNT 182
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R L+IA+ GS V +E + L V E+ +NA+ + +QN
Sbjct: 183 RNLLIAEAGSKVEIIESH-HNFDETFVLTNTVTEIFTYENAKADWHKLQNDSDHSYMIDH 241
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ S+ + G + + GE I I Q +
Sbjct: 242 TF--------AKQERDSRTTVNTFTFGGKLVRNNLDFIHNGENINSYMNGITIIGKEQLV 293
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T + H + S KGI S+ + GKV V + A + + Q +++L+
Sbjct: 294 DHHTAVHHKTPHCESYQNYKGIYKDKSHGVFNGKVFVDKLAQKTNAYQQNNNILLDEGAT 353
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P +E H T +++++ LFY RGI ++ A AL++ F + +Q +
Sbjct: 354 IDTKPQLEIFADDVKCSHGCTVGQLNEDALFYLRARGISKKEAQALLLFAFASDAIQNID 413
Query: 470 ME-FAVEAQKLIDISL 484
+E V+ +L+ L
Sbjct: 414 IEPLKVKISRLLASKL 429
>gi|192361506|ref|YP_001981956.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
gi|190687671|gb|ACE85349.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
Length = 434
Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats.
Identities = 90/422 (21%), Positives = 161/422 (38%), Gaps = 37/422 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E R+ A WL P+ + L PQS E L
Sbjct: 20 WLQELRVQAADAWLAQPWPTRKTEHWKYTPLQSL-------QKDTPQSWGQG--ETLEAA 70
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
IP+ T V V+ VF+S +GV+ S+A E L
Sbjct: 71 SLDLIPLD--------ATRLVFVNGVFNSEL------SSSLPAGVV--RFSQANSEQQAL 114
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TGQFER 230
V++YL VV + +A LN+A +G V++P+ ++ + + + T R
Sbjct: 115 VRQYLGRVVEGERHLFATLNNAWVNEGVLVHVPRNIQWEKPVYLVHVSSAQDAPTSANSR 174
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
L++ + G+ + +E + +N A+ ELV DNA + + +
Sbjct: 175 VLVVLESGASATLVEQYISTDEIQNSFVNALSELVLGDNASLHHYRLNLEQENALHIGAV 234
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
N +++ L GS + R + + + + Q +D
Sbjct: 235 HANL--------QRSARLRAFTLALGSRLQRIDYQLNHRAPGAELDLQGLYLPRHQQLVD 286
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + H N TS + +GI + + G++ +H+ A + +LL N
Sbjct: 287 YHTTINHWVPNCTSNEIFRGIVGDSAQAVFNGRIYIHQDAQKTLAELSNKNLLTSNKAEV 346
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL-- 468
+T P +E H AT S+++ + +Y RG+ + A ++ GFV E+L+++
Sbjct: 347 NTKPELEIYADDVKCAHGATVSQLNAQARYYLQSRGVSRQEAEVMLSFGFVNELLEQIAE 406
Query: 469 PM 470
PM
Sbjct: 407 PM 408
>gi|256422368|ref|YP_003123021.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
gi|256037276|gb|ACU60820.1| FeS assembly protein SufD [Chitinophaga pinensis DSM 2588]
Length = 439
Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats.
Identities = 87/416 (20%), Positives = 158/416 (37%), Gaps = 32/416 (7%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R LA+ R+ + P+ I+ + ++ + + + V P+ L+ I
Sbjct: 32 RKLAFSRFKELGLPT---IKTEEWRYTNVQRFLKDAFTLAQEEQVTVTPDQLKA---ANI 85
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P + + V A E + +S+A ++ +
Sbjct: 86 PQLDSYRVVLVNGRLQAD------------LSELPAGGKITVSKLSDAAGNTQ--LQAWF 131
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-ERTLIIAD 236
+ +AALN+A+F DG F+ L R L++
Sbjct: 132 DKHPHLQSQPFAALNAALFADGLFIEAGVNATLDKPLQIIHVYTASANAFIQPRHLVVLH 191
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ + + +E AV E+V +NAE+ + +Q + IY+
Sbjct: 192 KSATLEIIESAVGLNDSAIAFVNAVTEVVLEENAELWHYNIQ----STIKNSRHIYH--- 244
Query: 297 KRGDCRGMRSKISWTQLETGSA-ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+ SA +T S L G + + + ++ G Q +D+ T +
Sbjct: 245 -TSATQKADSRYHHFNFTLPSAELTRNNLSVALTGSNTETNLHGLYLATGSQHVDNHTFV 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
HL N S + KG+ +N + GK+ VH+ A + F Q ++LL+ ++ P
Sbjct: 304 DHLVPNCNSNELYKGVLLDDANGVFTGKIHVHQDAQKTNAFQQNNNLLMSEKANINSQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK--LP 469
+E H T + S+E LFY RGI EEAA +L+VN F ++ + +P
Sbjct: 364 LEIYADDVKCSHGFTVGRFSEESLFYLRSRGIGEEAAKSLLVNAFAFDITDQVHIP 419
>gi|17229986|ref|NP_486534.1| hypothetical protein alr2494 [Nostoc sp. PCC 7120]
gi|17131586|dbj|BAB74193.1| alr2494 [Nostoc sp. PCC 7120]
Length = 453
Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats.
Identities = 87/421 (20%), Positives = 148/421 (35%), Gaps = 34/421 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E R A P+ R F DL + G +V P +
Sbjct: 44 WLQELRGSAANWVRHSTIPT---TREEEWRFTDLSALRRVEFQQG-----EVKPADISAL 95
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ GV ++ A VV A+
Sbjct: 96 SLSEAANNRLVFVNGVYAPDLSAVADLPPGIVVDNL---------------SALPITEQE 140
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ER 230
+ + ALN+A +D + V + K V + F T R
Sbjct: 141 RVQKYLAQSEGALEVFTALNTAGISDVAVVLVAKNVIVETPIHLVFIAVAGETATISQPR 200
Query: 231 TLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
L++A+ GS VS +E P + L AV E+ DNA++ ++ V+N
Sbjct: 201 CLVVAESGSQVSVIEEFVTPNVDEGVYLTNAVTEITIADNAQVVHTRVENESKQAFH--- 257
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ K + S+ + + G I+ L GEQ+ + + Q
Sbjct: 258 -----IGKTAVTQARYSRYTCHAVTLGGKISRHNLEILQTGEQTETTLNGLTMVATNQLA 312
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D+ + + TS+ + K I ++ + GKV V + A + +LL+ +
Sbjct: 313 DTHSAIALNHPYGTSKQLHKCIVGDRAHAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKAR 372
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P +E + H AT S++ D+ +FY RGI A L+VN F E++ ++P
Sbjct: 373 VDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGIDANDARKLLVNAFAAEIINQIP 432
Query: 470 M 470
+
Sbjct: 433 V 433
>gi|300863813|ref|ZP_07108738.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
gi|300338161|emb|CBN53884.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
Length = 446
Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats.
Identities = 79/419 (18%), Positives = 150/419 (35%), Gaps = 23/419 (5%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R +A L P+ + F +L V +D L
Sbjct: 34 LKDLRDIATEYVLAAAFPT---TKDEEWRFTNLSPLLEIPFQVAEN--KQLDIGLSDITL 88
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ L V + S + T E +S A + +
Sbjct: 89 PVSSKEDLPLRLVFVNGYYAPQLSSVQSSLLPTLALE------FYAGNLSNAPGPYHARI 142
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERT 231
+++LS + F A LN A D + V++P+ + F T
Sbjct: 143 REHLSKHQQQSEVFSA-LNIAGLVDAAVVFVPQDKAIDTPIHLLFFTIAGATPVMCQPHC 201
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+IA+ GS ++ +E + + A+ E+V +NA + + +Q
Sbjct: 202 LVIAEPGSSITLVEDYATIG-NVSTFTNAMTEIVVGENATVNHLRIQREGGDAFH----- 255
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ K + S+ + + G+ I+ GE + + + G Q D+
Sbjct: 256 ---IGKSTISQSRHSRYTCHAISLGAKISRHNLEVTQAGEGTETTLNGLTLIGGEQLADT 312
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + + SR + K I ++ + GKV V + A + +LL+
Sbjct: 313 HSVIGFNYPHGMSRQLHKCIVDDKAHAVFNGKVFVPKLAQLTDAGQLNRNLLLSPKARVD 372
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E + H AT S++ D+ +FY RG+ E + L+++ F E+L +LP+
Sbjct: 373 TKPQLEIVADNVKCSHGATVSQLEDDEMFYLQSRGLDETTSRHLLIDAFAAEILNQLPV 431
>gi|198277422|ref|ZP_03209953.1| hypothetical protein BACPLE_03636 [Bacteroides plebeius DSM 17135]
gi|198269920|gb|EDY94190.1| hypothetical protein BACPLE_03636 [Bacteroides plebeius DSM 17135]
Length = 449
Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats.
Identities = 87/433 (20%), Positives = 154/433 (35%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + ++ Y AP + L + ++
Sbjct: 32 RAKAFADFEKLGFPTRKQEKY---KYTEVSKYFAPDYGLNLNRL-EFPVNPYEVFK---- 83
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V ++ V + GV F + + + PDLV+KY
Sbjct: 84 --------CDVPNMSTSLYFVVNDTFDKHVHPSAQLPEGVYFGSLKDVAEQRPDLVRKYY 135
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ + AA N+ DG +Y+PK V + + R LII +
Sbjct: 136 GKLADTSKDALAAFNTMFAQDGVCMYVPKNVVLERPIQLVNILRADVDFMVNRRVLIILE 195
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+ L C D N L VVE+ A +NA + +
Sbjct: 196 DGAQAKLLV-CDHAMDDVNFLSTQVVEVFAGENAVFDLYEL--------EETHNSTVRFN 246
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + + + T L G + +AI + +Q+D+ T +
Sbjct: 247 NLYVNQEAGSNVLLNGMTLHNGTTRNTTEVTLAGRGAEISLCGMAIVDQNEQVDNHTFID 306
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + TS + K + + + GKV V GA H+ + +L +T P +
Sbjct: 307 HKVPDCTSNELFKYVLDDQAVGAFAGKVLVREGAQHTSSQQTNRNLCATREARMYTQPQL 366
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY QRGI + A L++ FV EV+ + M+
Sbjct: 367 EIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDHIRMDALKDR 426
Query: 476 AQKLIDISLEGSV 488
L++ G +
Sbjct: 427 LHLLVEKRFRGEL 439
>gi|313206630|ref|YP_004045807.1| fes assembly protein sufd [Riemerella anatipestifer DSM 15868]
gi|312445946|gb|ADQ82301.1| FeS assembly protein SufD [Riemerella anatipestifer DSM 15868]
gi|325335929|gb|ADZ12203.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Riemerella anatipestifer RA-GD]
Length = 426
Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats.
Identities = 78/435 (17%), Positives = 153/435 (35%), Gaps = 40/435 (9%)
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIP 118
L A R+L+ PS Y + ++ + + E + I
Sbjct: 19 LNALERFLSKGFPSKKDEEYKYTNLKEII----------EKQYQFLPQE------EHHIS 62
Query: 119 IREQEIL---AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC--EHPDLV 173
E + L V V+ + ++ + + + EA+ E+ L
Sbjct: 63 EEELKALRLGEEDFDWVVLVNGKWCPEL------SKISDKDIKVLALEEALSNGENGALF 116
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERT 231
+ Y +T+ + LN A G +Y+PK + ++ + T R
Sbjct: 117 RPYFNTIAN-ESWAFPNLNLAFAHSGVALYVPKNTVVEKPIHIFYISQNQSENTFYNPRN 175
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+++ + GS + +E D ++ E+ NA+ + +QN
Sbjct: 176 ILVVEAGSQIEVIESH-HNFDDSFTFTNSLTEIFTKPNAKADWHKLQN--------DTDT 226
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V + S + G + + GE I I Q +D
Sbjct: 227 SYLVDHTFVKQERDSLATVNTFSFGGKLVRNNLDFIQEGENINSFMNGITIIGKDQLVDH 286
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H N S KG+ ++ + GKV V + A + + Q +++L+
Sbjct: 287 HTAVHHNQPNCESYQNYKGVFKDNAHGVFNGKVFVDKIAQKTNAYQQNNNILLSEGATID 346
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H T +++++ LFY RGI + A AL++ F + ++ + +E
Sbjct: 347 SKPQLEIFADDVKCSHGCTVGQLNEDALFYLRARGISKNEAQALLLYAFANDAMENIDIE 406
Query: 472 -FAVEAQKLIDISLE 485
++ KL+ LE
Sbjct: 407 PLKLKISKLLAEKLE 421
>gi|224823958|ref|ZP_03697066.1| FeS assembly protein SufD [Lutiella nitroferrum 2002]
gi|224603377|gb|EEG09552.1| FeS assembly protein SufD [Lutiella nitroferrum 2002]
Length = 438
Score = 240 bits (613), Expect = 4e-61, Method: Composition-based stats.
Identities = 87/429 (20%), Positives = 155/429 (36%), Gaps = 29/429 (6%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ R + P+ +R + + + + P + + V P L+ +
Sbjct: 26 WLRRGREAGLAFFAEAGFPT---LRQEDWKYTSVAAIEKSRFMPPPPTANGVAPGLIDAW 82
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
G + L V + D + GV ++E + P
Sbjct: 83 GLAG-----TQRLVFVNGRYQPRWSNIDPLP-----------GGVTLASLAEVLERDPQR 126
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
++ L + + +AALN A F+DG ++ + GV + F E G R +
Sbjct: 127 LEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAGLALHTRNV 186
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ A+ GS +E A L +LV +AE+++ +Q
Sbjct: 187 VRAEAGSRACLIEHHVALGD-GAYLSNTATDLVVGQDAEVEHLKLQQESLKAFH------ 239
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
V + S+ G + L E + + +++G Q D
Sbjct: 240 --VAALDVDQQQGSRFVSRSFALGGGLARVDIRVGLNAEHAACTLDGLYMTDGRQHSDHH 297
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T++ H TSR KG+ AG S + G+V V A HS + +LL+ +N T
Sbjct: 298 TRIDHARPYGTSREFYKGVLAGASRAVFNGRVIVQADAQHSDAYQANRNLLLSDNAEIDT 357
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-E 471
P +E H AT ++ E +FY RG+ E + L+ F E++ ++ M
Sbjct: 358 KPQLEIYADDVKCSHGATVGQLDPEQVFYLRSRGVGEVDSRTLLTFAFAAEMIGRVDMAP 417
Query: 472 FAVEAQKLI 480
+KL+
Sbjct: 418 LRARLEKLL 426
>gi|75906651|ref|YP_320947.1| FeS assembly protein SufD [Anabaena variabilis ATCC 29413]
gi|75700376|gb|ABA20052.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
variabilis ATCC 29413]
Length = 454
Score = 240 bits (613), Expect = 4e-61, Method: Composition-based stats.
Identities = 89/432 (20%), Positives = 152/432 (35%), Gaps = 37/432 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E R A P+ R F DL LR
Sbjct: 44 WLQELRERATNWVRHSVIPN---TREEEWRFTDLS--------------------ALRRV 80
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK-SGVIFMPISEAICEHPD 171
E + E L + + + V T + I + A+
Sbjct: 81 EFHHAAHTDVEKLHEMSLRGTGDNGLVFVNGVYTPELSNIANLPTGIVVGNLSALPITEQ 140
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--E 229
+ + ALN+A +D + V + K V + F T
Sbjct: 141 ERVQKYLAQSEGALEVFTALNTAGISDVAVVLVAKNVIVETPIHLLFVSVADETATISQP 200
Query: 230 RTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R L++A+ GS VS +E P + L AV E+ DNA++ ++ ++N
Sbjct: 201 RCLVVAESGSQVSVVEEFVTPNADEGVYLTNAVTEITIADNAQVVHTRIENESKQAFH-- 258
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ K +G S+ + + G I+ L GEQ+ + + Q
Sbjct: 259 ------IGKTAVTQGRYSRYTCHAITLGGKISRHNLEILQTGEQTETTLNGLTMIASNQL 312
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+ + + TS+ + K I ++ + GKV V + A + +LL+ +
Sbjct: 313 ADTHSAIALNHPYGTSKQLHKCIVGDRAHAVFNGKVFVPKPAQLTDAAQLNRNLLLSSKA 372
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
T P +E + H AT S++ D+ +FY RGI A L+VN F E++ ++
Sbjct: 373 RVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGIDANDARKLLVNAFAAEIINQI 432
Query: 469 PMEFAVEAQKLI 480
P+ KL+
Sbjct: 433 PVPSLR--NKLL 442
>gi|270158825|ref|ZP_06187482.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|289166382|ref|YP_003456520.1| component of SufBCD complex [Legionella longbeachae NSW150]
gi|269990850|gb|EEZ97104.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|288859555|emb|CBJ13520.1| component of SufBCD complex [Legionella longbeachae NSW150]
Length = 426
Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats.
Identities = 99/438 (22%), Positives = 162/438 (36%), Gaps = 39/438 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPE 107
W+ + A R P+ W + + +S+ P D
Sbjct: 21 WLAHLQTKALRDLHRRGFPTRHDEDWKYTSVDGLLNQSFLPVSNLESVAKPSHYDLEFD- 79
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+PI ++ +L S L K GVI +P+S AI
Sbjct: 80 ---------LPITQKILLQNG------------SYFSDDRLTSVLPK-GVIVLPLSAAII 117
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+HP+L++ YL ++ ++ + LN+A+ G +YIPKGV ++
Sbjct: 118 QHPELLEPYLGNILKQ-EHGFHYLNTAMIHCGVMIYIPKGVVLEEPIALTHVQTRMNQAV 176
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+ R +IIA+ S + +E + L V E++ NA++ + +Q
Sbjct: 177 YLRHVIIAEANSRATVIEDYQGLPD-GSYLTNTVTEILVGANAQLTHYKIQRESKSAYH- 234
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
V + S+ + L G S L+ E++ I Q
Sbjct: 235 -------VGHVAVKQLAGSEFANHSLSLGGQWVRSDVSLDLQEEKTYSLMNGIYAPTEGQ 287
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D T + HL N S KGI G S + GKV V + A H+ Q +LL+ N
Sbjct: 288 HVDHHTTVQHLVPNCRSEQDYKGILTGRSRAVFNGKVFVAKDAQHTDAIQQNKNLLLSVN 347
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H AT ++ +E LFY RGI A +++ F + L+
Sbjct: 348 AEVDTKPQLEIFADDVLCSHGATVGQLDEEALFYLATRGIDRLEASHYLIHAFASDNLRL 407
Query: 468 LPM-EFAVEAQKLIDISL 484
+P E A L+ L
Sbjct: 408 VPHRELAAYMGHLLTKQL 425
>gi|270294862|ref|ZP_06201063.1| FeS assembly protein SufD [Bacteroides sp. D20]
gi|270274109|gb|EFA19970.1| FeS assembly protein SufD [Bacteroides sp. D20]
Length = 447
Score = 239 bits (611), Expect = 5e-61, Method: Composition-based stats.
Identities = 93/434 (21%), Positives = 161/434 (37%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R +A+ + + P+ +Y + D+ + P + +L I
Sbjct: 30 RAVAFADFERLGFPTRKEEKY---KYTDISKFFEPDYGLN--------------LNRLEI 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GVIF + E +HPDLVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYGRALPKSHLPEGVIFGSLKEVAGKHPDLVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ ++ A N+A DG Y+PK V + + R LII
Sbjct: 133 YGKLADTAEDGVTAFNTAFAQDGVLFYVPKNVVVEKPIQLVNILRGDVNFMVNRRVLIIL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C N L V+E+ A +NA + + + +
Sbjct: 193 EEGAQARLLV-CDHAMDGVNFLATQVIEIFAGENAIFDFYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 244 SNMYVKQEANSNVLLNGMTLHNGTTRNTTRVTLVGEHAELNLCGMAIADKNQHVDNHTTI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + + + G V V A H+ + +L + +T P
Sbjct: 304 DHAVPNCTSNELYKYVLDEQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGIP A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDESALFYMRQRGIPVREARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|186684918|ref|YP_001868114.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
gi|186467370|gb|ACC83171.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
Length = 457
Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats.
Identities = 91/437 (20%), Positives = 162/437 (37%), Gaps = 49/437 (11%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E R A P+ R F DL + + + ++ ++L
Sbjct: 43 WLQELRQSAANWVRHSIIPT---TREEEWRFTDLSSLRKVQFNIETVNYASLEFDIL--- 96
Query: 113 EKLGIPIREQEILA---GVQTSKVAVDAVFDSVSVVTTFK--EELKKSGVIFMPISEAIC 167
P L GV +++ + S VV+ L++ GV
Sbjct: 97 -----PEAANSRLVFVNGVFAPELSAVSDLPSGIVVSNLAGLSVLEQEGVRQFLAQ---- 147
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+ ALN+A TD + V++ K V + F T
Sbjct: 148 -------------AEGAQEVFTALNTAGITDAAVVWVKKNVVVETPIHLVFISVVGETAT 194
Query: 228 F--ERTLIIADEGSYVSYLEGCTAPQRDEN------QLHAAVVELVALDNAEIKYSTVQN 279
R L++A+ GS V+ +E T + E+ AV E+ DNA++ ++ V+
Sbjct: 195 ISQPRCLVVAESGSEVTLVEEYTNRRGAESAEKEGVYFTNAVTEVWVGDNAQVSHTRVEQ 254
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
+ K + S+ + + G+ ++ L GEQ+
Sbjct: 255 EGAEAFH--------IGKTAIAQARDSRYTCHAITLGAKLSRHNLEILQTGEQTQTTLNG 306
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+ I +G Q D+ + + + TS + K I ++ + GKV V + A +
Sbjct: 307 LTIISGKQLSDTHSAIALNYPHGTSDQLHKCIVGDRAHAVFNGKVFVPKLAQLTNASQLN 366
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+LL+ + T P +E + H AT S++ D+ +FY RGI E A L++N
Sbjct: 367 RNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGIDENDARKLLINA 426
Query: 460 FVREVLQKLPMEFAVEA 476
F EV+ ++P+ E
Sbjct: 427 FAAEVINQIPIPSLREI 443
>gi|319900396|ref|YP_004160124.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
gi|319415427|gb|ADV42538.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
Length = 447
Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats.
Identities = 89/433 (20%), Positives = 161/433 (37%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ + P + L ++ ++
Sbjct: 30 RSAAFADFERLGFPTRKQEKY---KYTDVSNFFEPDYGLNLNRL-ELPVNPYEVFK---- 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V A+ V + T + GVIF + E ++P+LV+KY
Sbjct: 82 --------CDVPNMSTALYFVVNDAFYNKTLPKSHLPQGVIFGSLKEVAEQNPELVRKYY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ ++ AA N+A DG +Y+PK V + + R LII +
Sbjct: 134 GKLANTAEDGVAAFNTAFAQDGVLLYVPKNVVVEKPIQLVNILRGDVDFLVNRRVLIILE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ V L C N L V+E +NA + + + ++
Sbjct: 194 EGAQVRLL-ACDHAMDSVNFLATQVIEAFVGENAVFDFYEL--------EETHTSTVRIS 244
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + + + T L G + +AI++ Q +D+ T +
Sbjct: 245 NLYVKQEAGSNVLLNGMTLHNGTTRNTTRVTLAGRHAELNLCGMAIADKNQHVDNNTSID 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A TS + K + + + G V V GA H+ + +L + +T P +
Sbjct: 305 HAASYCTSNELYKYVLDDRAVGAFAGLVLVRPGAQHTSSQQTNRNLCATRDAHMYTQPQL 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY QRGIP A L++ FV EV+ + ++
Sbjct: 365 EIYADDVKCSHGATVGQLDETALFYMRQRGIPVHEARLLLMFAFVNEVIDTIRLDALKDR 424
Query: 476 AQKLIDISLEGSV 488
L++ G +
Sbjct: 425 LHLLVEKRFRGEL 437
>gi|159027408|emb|CAO86892.1| sufD [Microcystis aeruginosa PCC 7806]
Length = 441
Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 164/445 (36%), Gaps = 46/445 (10%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ + + I K +LE R + + P + F DL A
Sbjct: 18 LSRETVPTIDNGK-----ILELRESGASKAQELAIP---GRKDEEWQFTDLSQLWAIDFR 69
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
D +P + L V + ++ S
Sbjct: 70 APQPVTID-----KNALAVFLLPEAKNSRLVFVNGIYQPELSDISALP-----------S 113
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV ++ A D++ YL F+ ALN A +DG+ +++ +
Sbjct: 114 GVRVSNLANA---QKDVLVNYLGK--EKTPEFFTALNQAGLSDGAVIHVTANTVVTTPIH 168
Query: 216 TYFRINEKGTGQF--ERTLIIADEGSYVSYLEGCTAPQRDEN-------QLHAAVVELVA 266
F + +F LI+A+ G+ V+ +E A + AV E+
Sbjct: 169 LLFITVVEEIPRFYQPHNLIVAETGASVNIIENYGALAEHCSDLPVNYSYFTNAVTEIYL 228
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
NAE+ ++ VQ I +G S+ + ++ G+ +
Sbjct: 229 EANAEVIHTRVQRESGDGFHIGRTI--------IEQGRDSRYTLNEINLGAKLCRHNLDI 280
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L +GEQ+ + +A+ G Q D+ + + + + + K I G ++ + GKV V
Sbjct: 281 LQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGIANQLHKCIVDGSAHAIFNGKVFV 340
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+ A + +LLI N +T P ++ + H AT S++ + LFY RG
Sbjct: 341 PKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATISQLEADDLFYLQSRG 400
Query: 447 IPEEAAIALIVNGFVREVLQKLPME 471
+ + A +L+++ F E+L K+P+E
Sbjct: 401 LSADTARSLLIDAFSAEILAKIPLE 425
>gi|333029418|ref|ZP_08457479.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
gi|332740015|gb|EGJ70497.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
Length = 446
Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats.
Identities = 81/433 (18%), Positives = 160/433 (36%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + + P+ + + D+ + + + P L+ E
Sbjct: 30 RPSAISSFKKLGLPT---RKLEKYKYTDVAQF----FEGDYKVNFNRAPSSLKVDEVFK- 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V A + + K+++ GV ++ + KY
Sbjct: 82 --------CDVPYLDTAQAFLVNDSFHPEITKKDILPRGVTIGGLNAMSERFLEWFAKYY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KGTGQFERTLIIAD 236
+ ++ ALN+A+ DG F+YIPK M + + + R LIIA+
Sbjct: 134 GKIADTREDAIVALNTALVQDGVFIYIPKNTVVDMPIQLINILTSKENLMVNRRLLIIAE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
E S V++L C + L V E+ A +NA + + ++ +
Sbjct: 194 ENSQVNFLL-CNHTIDPVSFLMTGVTEIFAGENAHVNFYEIEENNSKSKRFNHTF----- 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + + + I+ + L GE + + +AI++ Q +D+ T +
Sbjct: 248 ---VYQESNSTVQVNGMTLHNGISCNCTNFYLAGEGAHADCNGMAITDKEQHVDNITLIE 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + TS + K + S + G + V A + + S+ + + + P +
Sbjct: 305 HSVPHCTSHELYKYVLDDKSVGAFTGMILVRPNAQKTDSIQTNRSICLTKDARMYARPQL 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
E H AT ++ ++ LFY RG+ A L++ F+ EV+ K+ +E E
Sbjct: 365 EIYADDVKCAHGATVGQLDEDALFYMRTRGMSMYEARLLLMFAFINEVVDKIKIEPLKER 424
Query: 476 AQKLIDISLEGSV 488
L++ +G +
Sbjct: 425 LHVLVEKRFKGEL 437
>gi|300770537|ref|ZP_07080416.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
gi|300763013|gb|EFK59830.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
Length = 446
Score = 239 bits (610), Expect = 8e-61, Method: Composition-based stats.
Identities = 75/416 (18%), Positives = 153/416 (36%), Gaps = 32/416 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A+ ++ + P+ ++ + +++ ++ P D +
Sbjct: 41 LTKLRQDAFDKFRQVGFPT---VKNEDWKYTNVHSLVNKTYVLNPDVDIDGL-----DFS 92
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
K IP + + V V + + ++ G+ PI +A E
Sbjct: 93 KADIPDLDAHRIILVNGQYVLAFSSLE------------EEIGLTVKPIDDAAQEGN--F 138
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTL 232
+ + N + ALN+A++T G ++ + KG + + R L
Sbjct: 139 SAHFAQYADKTQNPFVALNTALYTSGLYIDVAKGKALQKPIHIVHVATGAEDFFTQTRNL 198
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+ + + +E + V E+V +NA++++ +Q +
Sbjct: 199 IVLEPNAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQHYYLQ--------VSASVS 250
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSA-ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+++ + S + A + L E Y I ++ Q +D+
Sbjct: 251 HYLNHTEVYQEKYSLYNNYNCNFPGASFVRNDINVRLDAEYVESHLYGINLTADNQFVDN 310
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H+ + S K I S + GK+ V A + F Q +++LIG+ +
Sbjct: 311 HTVVDHMKPHCESYEWYKNIPQDTSTAVFNGKIFVREDAQKTNAFQQNNNMLIGDKSTVY 370
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H T + ++ LFY RGI EE+A L+V+ F +V +
Sbjct: 371 TKPQLEIFADDVKCSHGCTMGQFDNDALFYLRARGIGEESARLLLVHAFAFDVTTR 426
>gi|94501135|ref|ZP_01307658.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
gi|94426711|gb|EAT11696.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
Length = 451
Score = 239 bits (610), Expect = 8e-61, Method: Composition-based stats.
Identities = 78/414 (18%), Positives = 146/414 (35%), Gaps = 31/414 (7%)
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
++ + P+ + A + L+ Q+ D E IP
Sbjct: 35 AGLEQFKALPFPT---RKTEAWKYTSLFALTQQDYNHPVQNTDVTGVESFE------IPE 85
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+ L V +V D S G+ + S+A ++ L
Sbjct: 86 LDVHRLVYVNGVYQESLSVIDQES------------GLSVVRFSDADESQKSIIADKLGQ 133
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLIIADE 237
N + ALN+A DG +++ K + + + F R LI+ +
Sbjct: 134 TAETDRNLFTALNNAQVNDGVLIHVAKETQVEKPIQLVNITTQQAQPASAFARHLIVLER 193
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ V +E + ++N L E D A++++ V + GG+Y
Sbjct: 194 HANVKVIEQFISSDDEQNVLLNQTSEAYVADGAKLEHYRVHTEHESSLHF-GGMY----- 247
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
S+ Q+ G I S E + + Q +D + + H
Sbjct: 248 --VDLQRDSQFESYQMLLGGKIKRFDVLVNHNQPGSHCEMKGVYLPKNDQHVDIHSYIEH 305
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A + T+ V +GI A S + G++ +H A + +LL+ + +T P +E
Sbjct: 306 KAAHCTTDEVYRGIMADNSKAVFNGRIHIHPDAQKTLAELSNKNLLLSDKAQVNTKPELE 365
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +++ + FY RGI + A ++ GF+ E++ +P+E
Sbjct: 366 IYADDVRCAHGATVAQLDETAKFYLRSRGISSKEADIMLSFGFINELIDSMPLE 419
>gi|53711559|ref|YP_097551.1| putative ABC transporter permease [Bacteroides fragilis YCH46]
gi|52214424|dbj|BAD47017.1| putative ABC transporter permease protein [Bacteroides fragilis
YCH46]
Length = 447
Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats.
Identities = 94/433 (21%), Positives = 160/433 (36%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P+ + +Y + D+ + P + L P + YE
Sbjct: 30 RATAFADFERQGFPTRKQEKY---KYTDVSKFFEPDYGLNLNRL----PIPVNPYEVFKC 82
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ V DA ++ V + E GVIF + +HP+LVKKY
Sbjct: 83 DVPNMS----TSLFFVVNDAFYNQVLPKSGLPE-----GVIFGSLRNMAEQHPELVKKYY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ + A N+A DG +Y+PK V + + R LII +
Sbjct: 134 GKLADTSKDAVTAFNTAFAQDGVLMYVPKNVIVDRPIQLVNILRADVNFMVNRRVLIILE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ L C + N L V+E+ A +N+ + + +
Sbjct: 194 EGAQARLLI-CDHAMDNVNFLATQVIEVFAEENSVFDLYEL--------EETHTSTVRFS 244
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+G S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 245 NLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQHVDNNTSID 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N TS + K + S + G V V A H+ + +L + +T P +
Sbjct: 305 HAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQPQL 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 365 EIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLEALKDR 424
Query: 476 AQKLIDISLEGSV 488
L++ G +
Sbjct: 425 LHLLVEKRFRGEL 437
>gi|307824105|ref|ZP_07654332.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
gi|307734889|gb|EFO05739.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
Length = 440
Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats.
Identities = 86/418 (20%), Positives = 155/418 (37%), Gaps = 33/418 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQ-SLDDVDPELLRT 111
W+ R A + PS + ++ + D+D E L++
Sbjct: 27 WLKALRAEALMAFSAHGFPSPRE---EEWRYTNVSGIEKKLFSPSLSLTAGDLDSEWLKS 83
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSV-SVVTTFKEELKKSGVIFMPISEAICEHP 170
Y+ S V V+ F + S +T V M +++A+ + P
Sbjct: 84 YQL------------EDTWSVVLVNGHFSAELSNLTDLPST-----VSVMSMADALVKQP 126
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
D V+KYL T ++ + A N+A FTDG FV++P + + R
Sbjct: 127 DKVEKYLGTAADQSEHSFIAFNTAWFTDGLFVHVPVKQVLNKPIQLLHIVTGSDAMATTR 186
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+IIADE + +E L AAV E+ NA++ +Q+ G
Sbjct: 187 NIIIADEMAEAKVIETFVGID--NAYLTAAVTEVFVGSNADVTLYKMQSESDKAYHFGGS 244
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ ++ + G + L S E + + Q ID
Sbjct: 245 --------YIKQARDARFTHHNFAFGGLLARSDIHADLD-HASECELNGLYLGVKRQHID 295
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ T++ HL SR + KG+ + ++G+V V A + + +LL+ ++
Sbjct: 296 NHTRINHLKPYAISRELYKGVLDDRARGVFQGRVIVAIDAQKTDSQMNNRNLLLSDDAEV 355
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
T P +E H T ++ ++ +FY R + EE A ++ F E++ K+
Sbjct: 356 DTKPQLEIYADDVKCGHGVTVGQLDEKSIFYLQSRCVDEETARNMLTFAFANEMVDKI 413
>gi|171910581|ref|ZP_02926051.1| FeS assembly protein SufD [Verrucomicrobium spinosum DSM 4136]
Length = 450
Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats.
Identities = 97/444 (21%), Positives = 180/444 (40%), Gaps = 30/444 (6%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
S ++ P+W A+ + + P +R + S SLD
Sbjct: 30 DFSKLEDAPEWFQSRARAAWEEFQALPMP---GLRDEHWRY----------SQSKNLSLD 76
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+ T + + + L+ V + ++ + + + GV+ +P
Sbjct: 77 GLHLAGETTEAEKQAAMEGSKGLSHVAARLIFLNDRL------IHSQTDGLEHGVVVLPF 130
Query: 163 SEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
+EA+ H D++++YL +G +AAL+ A G+ V PK + + ++
Sbjct: 131 AEALRTHGDVLQQYLMKRKADLGSEKFAALHLAHVRAGAVVLAPKNAVLKAPIEIFHWVS 190
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
+ F TLI+A + + V+ L+ A RDE AV + VA + + I Y Q
Sbjct: 191 GVNSLVFPHTLIVAGDHAQVTVLDHH-ASLRDEVAQSVAVADFVAGNGSHITYVNSQELA 249
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
+++ QL+ G++ L GE S + ++
Sbjct: 250 DSARALHISSTT--------VARDAQVKALQLQLGASFARSESVSDLAGEGSRSDMLGVS 301
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
+ Q +D T HLA T S ++ K + + G ++V GA ++ + +C +
Sbjct: 302 LPFSSQIVDMRTLQNHLAPRTYSDLLYKNALYDKTRTIFSGLINVADGAHYTDAYQKCRN 361
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LL + A ++P +E H AT++ IS++ LFY RGIP++ + LI GFV
Sbjct: 362 LLNSADSEAVSMPGLEINADQVKCSHGATSAPISEDELFYLKARGIPDQESRQLIAIGFV 421
Query: 462 REVLQKLPMEFAVE-AQKLIDISL 484
+V+ +L E +E + I+
Sbjct: 422 EDVISRLGHEELIESLDRRIEEKF 445
>gi|227539029|ref|ZP_03969078.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
gi|227241085|gb|EEI91100.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
Length = 446
Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats.
Identities = 74/416 (17%), Positives = 153/416 (36%), Gaps = 32/416 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A+ ++ + P+ ++ + +++ ++ P D +
Sbjct: 41 LTKLRQDAFDKFRQVGFPT---VKNEDWKYTNVHSLVNKTYVLNPDVDIDGL-----DFS 92
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
K IP + + V + + + ++ G+ PI +A E
Sbjct: 93 KADIPDLDAHRIVLVNGQYILAFSSLE------------EEIGLTVKPIDDAAQEGN--F 138
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTL 232
+ + N + ALN+A++T G ++ + KG + + R L
Sbjct: 139 ITHFAHYADKTQNPFVALNTALYTSGLYIDVAKGKTLQKPIHIVHVATGAEDFFTQTRNL 198
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+ + + +E + V E+V +NA++++ +Q +
Sbjct: 199 IVLEPHAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQHYYLQ--------VSASVS 250
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSA-ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+++ + S + A + L E Y I ++ Q +D+
Sbjct: 251 HYLNHTEVYQEKYSLYNNYNCNFPGASFVRNDINVRLDAEYVESHLYGINLTADNQFVDN 310
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H+ + S K I S + GK+ V A + F Q +++LIG+ +
Sbjct: 311 HTVVDHMKPHCESYEWYKNIPQDTSTAVFNGKIFVREDAQKTNAFQQNNNMLIGDKSTVY 370
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H T + ++ LFY RGI EE+A L+V+ F +V +
Sbjct: 371 TKPQLEIFADDVKCSHGCTMGQFDNDALFYLRARGIGEESARLLLVHAFAFDVTTR 426
>gi|329667396|gb|AEB93344.1| hypothetical protein LJP_1018c [Lactobacillus johnsonii DPC 6026]
Length = 401
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 88/453 (19%), Positives = 161/453 (35%), Gaps = 60/453 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L ++ + S K NE W+ + RL A+ R + P R Y
Sbjct: 2 LTKENLLNFSHKNNESSWLTDLRLKAFERLEELDYPKMQRFSYQDWPL---------IKK 52
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ D L ++ L+K
Sbjct: 53 EDFSWSNQADFSLKEE-------------------------------------QKLLEKK 75
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G+I I A ++P+LV+ +V+ ++ A + A G F+YIPK ++
Sbjct: 76 GIILTDIFTASKKYPELVQSTFGSVIKHNEDKLTAYHYAYLNSGLFLYIPKDTILTEPIT 135
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ LI+AD S V +LE ++ + + V EL+A + I++S
Sbjct: 136 ISLSPTQDT--YISHLLIVADNNSKVKFLEEIQDKEKKASSASSMV-ELIARPGSHIEFS 192
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ R + + W T L GE S
Sbjct: 193 SLDELSQD--------TTLYFNRRAKIEKDAHVEWAIAFMNDCNTLGDLDSELVGEGSFA 244
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +IA++ Q++ ++ + ++T I +G+ S + G + GA S+
Sbjct: 245 DSKAIAVTTANQKVGINNRVTNRGPHSTGLINQRGVLLENSRLIFNGIGQIVHGAHGSKA 304
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
Q L++ + P + + H A+ + + Y + RGIP + A L
Sbjct: 305 DQQNRVLMMSDEAHGDANPLLLIDENDVIAAHAASVGPVDKVQMNYLMSRGIPYDQAQRL 364
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ VL +P + +K+IDI LE +
Sbjct: 365 VIRGFLGAVLDAIPNKDVR--RKMIDI-LERKL 394
>gi|255692958|ref|ZP_05416633.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
gi|260621269|gb|EEX44140.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
Length = 449
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 89/434 (20%), Positives = 157/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ +Y + D+ Y P + +L I
Sbjct: 32 RAAAFADFERIGFPTRKMEKY---KYTDVSKYFEPDFGLN--------------LNRLAI 74
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GVIF + E ++P+LVKKY
Sbjct: 75 PVNPYEVFKCDVPNMSTALYFVVNDAFYNKALPKTHLPEGVIFGSLKEVAEQYPELVKKY 134
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+ DG Y+PK V + + R LII
Sbjct: 135 YGKLADTSKDGVTAFNTTFAQDGVIFYVPKNVVVEKPIQLVNILRADVNFMVNRRVLIIL 194
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C + N L V+E+ A +N + +
Sbjct: 195 EDGAQARLLL-CDHAMDNVNFLATQVIEVFAGENVVFDMYEL--------EETHTSTVRF 245
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + T LL GE + +AI++ Q +D+ T +
Sbjct: 246 SNLYVKQEANSNVHLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNTSI 305
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + + + G V V A H+ + +L + +T P
Sbjct: 306 DHAVPNCTSNELFKYVLDDQAVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQPQ 365
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY RGI E+ A L++ FV EV+ + ++
Sbjct: 366 LEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLDALKD 425
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 426 RLHLLVEKRFRGEL 439
>gi|227889934|ref|ZP_04007739.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227849378|gb|EEJ59464.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 401
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 90/453 (19%), Positives = 164/453 (36%), Gaps = 60/453 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L ++ + S K NE W+ + RL A+ R + P R Y + P S
Sbjct: 2 LTKENLLNFSHKNNESSWLTDLRLKAFERLEELDYPKMQRFSYQDWPL--IKKEDFPWSN 59
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
SL + ++ L+K
Sbjct: 60 QADFSLKEE--------------------------------------------QKLLEKK 75
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G+I I A ++P+LV+ +V+ ++ A + A G F+YIPK ++
Sbjct: 76 GIILTDIFTASKKYPELVQSTFGSVIKHNEDKLTAYHYAYLNSGLFLYIPKDTILTEPIT 135
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ LI+AD S V +LE + + + +VEL+A + I++S
Sbjct: 136 ISLSPTQDT--YISHLLIVADNNSKVKFLEEIQD-KEKKASSASLMVELIARPGSHIEFS 192
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ R + + W T L GE S
Sbjct: 193 SLDELSQD--------TTLYFNRRAKIEKDAHVEWAIAFMNDCNTLGDLDSELVGEGSFA 244
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +IA++ Q++ ++ + ++T I +G+ S + G + GA S+
Sbjct: 245 DSKAIAVTTANQKVGINNRVTNRGPHSTGLINQRGVLLENSRLIFNGIGQIVHGAHGSKA 304
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
Q L++ + P + + H A+ + + Y + RGIP + A L
Sbjct: 305 DQQNRVLMMSDEAHGDANPLLLIDENDVIAAHAASVGPVDKVQMNYLMSRGIPYDQAQRL 364
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ VL +P + +K+IDI LE +
Sbjct: 365 VIRGFLGAVLDAIPNKDVR--RKMIDI-LERKL 394
>gi|46445825|ref|YP_007190.1| putative sufD [Candidatus Protochlamydia amoebophila UWE25]
gi|46399466|emb|CAF22915.1| putative sufD [Candidatus Protochlamydia amoebophila UWE25]
Length = 450
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/427 (19%), Positives = 157/427 (36%), Gaps = 33/427 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYY--YAAPKSIVGPQSLDDVDPELLRT 111
+ + R A+ ++L P+ Y I L+ Y PK +
Sbjct: 41 LQKARQKAWSQFLERGLPTKQSEAYRYIKLRHLFSQNYEFPKEESITKDQ---------- 90
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L P + L V ++ F S T VI + EA
Sbjct: 91 IASLVYPECQHSFL-------VFINGQFCSEFSETKNLPSQ----VIISTLQEANQTFGT 139
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFE 229
Y S + ++ +A +NSA+ G+F+YIP + + +G
Sbjct: 140 FFNNYWSKSLKEENDSFALINSALHHQGAFIYIPPKTIVETPIQILHLVQAQGQLLMLMP 199
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R + + V ++ + + V + + D A + Y+ + N +
Sbjct: 200 RINVCVGAQAEVKFVSSIHQKSMNGYFI-NQVTDFLVEDQAYVHYTQILN------EEHV 252
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
++F R + +S + G L GE + I++ +++
Sbjct: 253 QAWHFEAVRAHLK-KQSTFKTVCITEGGMTVRNDYHISLSGENAEVLLNGISMLEDKREV 311
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ + H A N S + K + FS +++ GK+ V + A + F ++LL+ ++
Sbjct: 312 HTHIFIDHQAPNCRSYQLFKAVLNDFSRSSFEGKIMVRQKAQKTEAFQLNNNLLLSDHAH 371
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
A + P +E H AT ++ E LFY RG PE AA L++ GF +V++ +P
Sbjct: 372 ADSKPNLEIFADDVKASHGATVGQLDAEQLFYMKTRGFPEMAAKNLLIYGFAEQVIEMIP 431
Query: 470 MEFAVEA 476
+ EA
Sbjct: 432 INSIKEA 438
>gi|148257191|ref|YP_001241776.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. BTAi1]
gi|146409364|gb|ABQ37870.1| Iron-regulated ABC transporter permease protein SufD
[Bradyrhizobium sp. BTAi1]
Length = 441
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 86/409 (21%), Positives = 153/409 (37%), Gaps = 25/409 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ R+ + P R A + DL + + L + + +T +
Sbjct: 35 RAAAFDRFDAVGLP---HRRVEAWRYTDLRT-----QMKEAKRLASLPDDAAKTKAR--- 83
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ AG K+ + D V + G+ P+++A+ L+ + L
Sbjct: 84 --EASNLFAGAGFRKLVI---VDGAFVPELSDLADLEPGLTIQPMADALAADQPLLLQRL 138
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
VVP D A + + P + N T F R+ +
Sbjct: 139 GPVVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVTTNWVATSMFTRSQVNIGA 198
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + +E P E Q++ A+ +LV D A I + V G + N
Sbjct: 199 GASATLVESHQGPDGTEYQVNTAL-QLVVGDEARIDHVKVVTEGNGALHISSLLAN---- 253
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G R+ + G ++ + GE + + ++ G Q D+ + H
Sbjct: 254 ----IGARATFNQLGFVAGGSLVRNQLFVHIAGEGTVADIRGGSLLAGAQHADTTLAIEH 309
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A+N SR K + + ++GK++V GA + +LL+ + A + P +E
Sbjct: 310 AAENCQSRETFKAVVGDTARAVFQGKITVSPGAQKTDAKMMSRALLLSDEAEADSKPELE 369
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
H TT I DE LFY + RGIP + A AL++ F+ E+++
Sbjct: 370 IFADDVQCGHGTTTGAIDDELLFYLMARGIPPDEAKALLIQAFIGEIIE 418
>gi|313675023|ref|YP_004053019.1| fes assembly protein sufd [Marivirga tractuosa DSM 4126]
gi|312941721|gb|ADR20911.1| FeS assembly protein SufD [Marivirga tractuosa DSM 4126]
Length = 441
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 88/429 (20%), Positives = 156/429 (36%), Gaps = 29/429 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + + P Y + ++ K DD L K I
Sbjct: 36 RKQAIDNFKELGFPHAKHEEY---KYSNVAK-MFGKLFNVGNLSDDSFSLSLDEASKYFI 91
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P + L V + V E GV I A ++ + +K+
Sbjct: 92 PELDAIRLVFV-----------NGVLDNKLSDMETLPKGVHIQAIKTAADDYAEDFEKHF 140
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTLIIA 235
+T G + ++ LN+A G FV I ++ Y+ + K R L+IA
Sbjct: 141 NTHEIEGADNFSELNTAFTNGGVFVKIDANAVVETPIACYYFNDAKNADVISQPRNLVIA 200
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+ S S +E + + AV E+V D+ Y QN Q + +
Sbjct: 201 KKNSQASLIESYVTLGENTS-FTNAVTEIVMEDDCVFNYYKYQNESDQAIQVGATMVH-- 257
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ +S + L A+ + + E S Y + + + +D+ T +
Sbjct: 258 ------QLGKSVFNGVTLSLNGAMLRNNLNTAIHKEHSETNMYGLYLLDRKTHVDNHTVV 311
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N S + KGI G S + GK+ V + A + F ++++ ++ T P
Sbjct: 312 DHKVPNCESNEMYKGILDGQSRGVFNGKIFVRQDAQKTNAFQSNRNVVLSDDAEVDTKPQ 371
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT ++ + LFY RGI + A ++++N F +VL + +E
Sbjct: 372 LEIWADDVQCSHGATVGQLDVDQLFYLRARGIDKHTAKSMLLNAFASDVLSNIKIEA--- 428
Query: 476 AQKLIDISL 484
+ LI+ +
Sbjct: 429 FRTLIEGKI 437
>gi|228470973|ref|ZP_04055818.1| FeS assembly protein SufD [Porphyromonas uenonis 60-3]
gi|228307370|gb|EEK16384.1| FeS assembly protein SufD [Porphyromonas uenonis 60-3]
Length = 462
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 88/418 (21%), Positives = 162/418 (38%), Gaps = 23/418 (5%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
++ L A + P + ID + LY AP + Q LD +
Sbjct: 37 RDFALEALSEYA---LPQRGMEDWQRIDIESLY---APDYGINLQELDLAPAGHKQ---- 86
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
+P ++ T K + + K +L + GV I E + E+PDL +
Sbjct: 87 --LPQYNCDLSVNALTIKASALNSNYLYTHYANQKRKLPE-GVFVGSIKEFVKEYPDLAE 143
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY-FRINEKGTGQFERTLI 233
+Y + V + ALN+ D +Y+P G++ + ++ R LI
Sbjct: 144 RYYGQIAEVDTDGTIALNTLFVQDAFVLYVPDGMQLEQPVQLVQLLHAQEPLLCIRRWLI 203
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I + + S L C + L V E+ D A++K D + +
Sbjct: 204 ILGDRAEASILV-CDHTIDRTSFLINQVAEIYVGDGAQLKLF--------DMEENSHQTH 254
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+G S+++ + IT GE++ +A++NG Q +D+ T
Sbjct: 255 RTCTYFLRQGAESQVTLATYTLNNGITRNSFRTRFLGERAEQILGGVAVTNGTQHVDTFT 314
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++ H+ S + K + S + G++ V + A + + ++L+ ++
Sbjct: 315 RVEHIKPKCHSTQLFKNLLEEQSTGAFSGRIFVAQSAQQTEAYQSNRNMLLSPEARMYSK 374
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E H T + +E LFY +QRGIPE A ++ FV +V+ +P+E
Sbjct: 375 PQLEIYADDVQCSHGMATGHLDEEALFYMMQRGIPEHEARVMLSVAFVGDVIALMPLE 432
>gi|253564380|ref|ZP_04841837.1| ABC transporter permease [Bacteroides sp. 3_2_5]
gi|265764951|ref|ZP_06093226.1| FeS assembly protein SufD [Bacteroides sp. 2_1_16]
gi|251948156|gb|EES88438.1| ABC transporter permease [Bacteroides sp. 3_2_5]
gi|263254335|gb|EEZ25769.1| FeS assembly protein SufD [Bacteroides sp. 2_1_16]
Length = 447
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 93/433 (21%), Positives = 159/433 (36%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P+ + +Y + D+ + P + L P + YE
Sbjct: 30 RATAFADFERQGFPTRKQEKY---KYTDVSKFFEPDYGLNLNRL----PIPVNPYEVFKC 82
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ V DA ++ + E GVIF + +HP+LVKKY
Sbjct: 83 DVPNMS----TSLFFVVNDAFYNQALPKSGLPE-----GVIFGSLRNMAEQHPELVKKYY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ + A N+A DG +Y+PK V + + R LII +
Sbjct: 134 GKLADTSKDAVTAFNTAFAQDGVLMYVPKNVIVDRPIQLVNILRADVNFMVNRRVLIILE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ L C + N L V+E+ A +N+ + + +
Sbjct: 194 EGAQARLLI-CDHAMDNVNFLATQVIEVFAEENSVFDLYEL--------EETHTSTVRFS 244
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+G S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 245 NLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQHVDNNTSID 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N TS + K + S + G V V A H+ + +L + +T P +
Sbjct: 305 HAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQPQL 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 365 EIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLEALKDR 424
Query: 476 AQKLIDISLEGSV 488
L++ G +
Sbjct: 425 LHLLVEKRFRGEL 437
>gi|60679818|ref|YP_209962.1| putative ABC transporter protein [Bacteroides fragilis NCTC 9343]
gi|60491252|emb|CAH06000.1| putative ABC transporter protein [Bacteroides fragilis NCTC 9343]
gi|301161341|emb|CBW20881.1| putative ABC transporter protein sufD [Bacteroides fragilis 638R]
Length = 451
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 93/433 (21%), Positives = 159/433 (36%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P+ + +Y + D+ + P + L P + YE
Sbjct: 34 RATAFADFERQGFPTRKQEKY---KYTDVSKFFEPDYGLNLNRL----PIPVNPYEVFKC 86
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ V DA ++ + E GVIF + +HP+LVKKY
Sbjct: 87 DVPNMS----TSLFFVVNDAFYNQALPKSGLPE-----GVIFGSLRNMAEQHPELVKKYY 137
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ + A N+A DG +Y+PK V + + R LII +
Sbjct: 138 GKLADTSKDAVTAFNTAFAQDGVLMYVPKNVIVDRPIQLVNILRADVNFMVNRRVLIILE 197
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ L C + N L V+E+ A +N+ + + +
Sbjct: 198 EGAQARLLI-CDHAMDNVNFLATQVIEVFAEENSVFDLYEL--------EETHTSTVRFS 248
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+G S + + + T L GE + +AI++ Q +D+ T +
Sbjct: 249 NLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLAGEGAEINLCGMAIADKNQHVDNNTSID 308
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N TS + K + S + G V V A H+ + +L + +T P +
Sbjct: 309 HAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTNRNLCATRDARMYTQPQL 368
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY RGI E+ A L++ FV EV+ + +E
Sbjct: 369 EIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLEALKDR 428
Query: 476 AQKLIDISLEGSV 488
L++ G +
Sbjct: 429 LHLLVEKRFRGEL 441
>gi|282897159|ref|ZP_06305161.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
gi|281197811|gb|EFA72705.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
Length = 460
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 91/446 (20%), Positives = 160/446 (35%), Gaps = 43/446 (9%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EP W+ + R A + P+ R F DL + +L +
Sbjct: 37 KEPSWLEQVRTNATKWVRHSVIPT---TRDEEWRFTDLSP-LREINFALGSNLGSSQIAM 92
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
E L +P + + V T + SG+ +
Sbjct: 93 ESLMEGLALPEATHRL------------VFINGVLTPTLSQTSDLPSGLHVGNLDS---- 136
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
D V + + ++ LN+A +D + ++ K V + F F
Sbjct: 137 LEDSVAQKYLAQFDGTRDVFSDLNTAGLSDVAVLWAGKNVVVEDSIHLLFISLVGEFPTF 196
Query: 229 --ERTLIIADEGSYVSYLEGCTAPQRDENQ-----------LHAAVVELVALDNAEIKYS 275
R L+IA+ S +S +E Q + +V E+ +NA++ +S
Sbjct: 197 CQPRCLVIAEGNSQISLVEEYIILNTPSLQNNPMGAGLNTGFNNSVTEIWVHENAQVNHS 256
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ GD G K + S+ S + GS I+ + GEQ+
Sbjct: 257 RI--VLGGDHSFDIG------KTAVTQARHSRYSCNAITIGSKISRHNLELIQTGEQTET 308
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
Y++ + Q D+ + + TS+ + K I ++ + GK+ V + A +
Sbjct: 309 NLYALTVIAQKQLGDTHSAIALNYPYATSKQLHKLIIGDRAHGVFNGKIFVPKSAQLTDA 368
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+LL+ + T P +E + H AT S++ D+ +FY RGI E A L
Sbjct: 369 SQLNRNLLLSSKARVDTKPQLEITADNVKCAHGATVSQLEDDQIFYLQSRGIGETEARKL 428
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLID 481
+VN F EV+ +P+ E KL+
Sbjct: 429 LVNAFATEVINLIPLASLRE--KLLK 452
>gi|333029423|ref|ZP_08457484.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
gi|332740020|gb|EGJ70502.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
Length = 447
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 87/455 (19%), Positives = 160/455 (35%), Gaps = 34/455 (7%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+E +I S+ M R A + P+ + + D+ + P +
Sbjct: 14 SEKVINSNSSVI-----MNRLRKNAISDFEKQGFPT---KKLEDFKYTDVAKFFEPDYGI 65
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ +L IP + V + + V K+ L
Sbjct: 66 NLK--------------RLNIPANPDSVFKCDVPNLNTIECFMVNDVFYPEVRKQSLIPD 111
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV+F + + ++ D+V+KY + + +ALN+A DG +YIPK V +
Sbjct: 112 GVVFGSLKDLGDKYADIVEKYYGQLADTSKDAISALNTAFAQDGILLYIPKNVIIEEPIQ 171
Query: 216 TYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ R LII + G+ L C + L V E+ +NA +
Sbjct: 172 LINLLRADVNLMSNRRLLIILERGAQAKMLI-CNHAVDEVEFLSTGVTEIFVGENANFDF 230
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + + S + + + T L GE +
Sbjct: 231 YEL--------EETHTRTARFNNVFVSQDANSNVLLNNMTLHNGATRNTIEVKLLGEGAH 282
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + +AI + Q +D+ T + H+ N TS + K + S + G V V A +
Sbjct: 283 IDCHGMAIEDKNQHVDNTTLIDHVVPNCTSNELFKYVLDDHSVGAFTGLVLVRPDAQKTN 342
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L + + + P +E H AT ++ + LFY RGI + A
Sbjct: 343 SQQTNRNLCVTKDARMYARPQLEIYADDVKCGHGATVGQLDETALFYMRARGISKHEARL 402
Query: 455 LIVNGFVREVLQKLPME-FAVEAQKLIDISLEGSV 488
L++ FV EV+ + +E L++ G +
Sbjct: 403 LLMFAFVNEVIDTISIEALKDRLHILVEKRFRGEL 437
>gi|282892126|ref|ZP_06300601.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498021|gb|EFB40365.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 434
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 79/417 (18%), Positives = 149/417 (35%), Gaps = 30/417 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT-Y 112
+ + R A+ +L + P+ D++ Y + + + P L +
Sbjct: 29 LKKIRQKAWDHFLELGLPTPRN---------DVFRYVPLRKLFAHTYATALTPALDKAKI 79
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
P +L V V + + + V+ P+ +AI
Sbjct: 80 ADFIAPECIHSVLVFVNGYYVPSLSDISGLP-----------TKVVVTPLEQAIRSFGAF 128
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERT 231
+ + + +A LN+A+ TDG FVYIP ++ + ++ + R
Sbjct: 129 LTNQWGKTLMEETDPFAILNAAIHTDGIFVYIPPRLQVEKPIQILEIMDTEVPFMSMPRL 188
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
S ++ L V + + A ++Y+ Q YP +
Sbjct: 189 HFFVGAQSELNVLS-TLGSLSGSTYWVNQVADFSIEEQAHVRYT--QTSYPLPPECWQ-- 243
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+T S GS +L GE + E + ++ +
Sbjct: 244 ---MTSTRAYLKKNSTFLAVHATEGSTTARHDYRVVLNGENAHAELNGAWTLDEKREAHT 300
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ H + N S + KGI G S++++ GK+ V + A + F +++++ + A
Sbjct: 301 HVLVDHQSPNCQSLQLFKGILNGSSHSSFEGKILVRQAAQKTNAFQLNNNIILSDTARAE 360
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ P +E H AT ++ E LFY RG P A L+V+GF +EV K+
Sbjct: 361 SKPNLEIFADDVKASHGATVGQLDKEQLFYLKTRGCPPVDAKRLLVDGFAQEVYNKI 417
>gi|119945238|ref|YP_942918.1| FeS assembly protein SufD [Psychromonas ingrahamii 37]
gi|119863842|gb|ABM03319.1| FeS assembly protein SufD [Psychromonas ingrahamii 37]
Length = 475
Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats.
Identities = 88/454 (19%), Positives = 170/454 (37%), Gaps = 40/454 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ + R A + + PS + + + + K + + + T
Sbjct: 25 WLNDLRESAIKNFAAQGFPSP---KDESWKYTN------TKKLQQTEYCLAQQSIIPPT- 74
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ L I EQ+ +S + G+I ++A+ +HP L
Sbjct: 75 DSLTAQISEQQFCPDEHRMVFINGTYHHDLSSNPPLPK-----GIILSSFAQALQDHPIL 129
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFER 230
+ L +V + ++ALNSA +DG F++ + + + F K + R
Sbjct: 130 IASTLGEMVNHQTHPFSALNSAFMSDGLFLWAAENSQMAPPIHCLFISTTTAKTVVCYPR 189
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQL--------------HAAVVELVALDNAEIKYST 276
L++ + ++ +E + AV E+ A++ +
Sbjct: 190 LLLVLKNKTQLTLIEHYIDLCSPRSDPDMTAANGTSGNPNLINAVTEIHLGSEAQLDHYK 249
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+Q S + + S+ + G+ + L G Q
Sbjct: 250 LQRESLNSSH--------IAAMYVQQHQASRFTSHSYSLGAPLARYDIQVELTGSQCECC 301
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+ +++ Q +D T++ HLA +S+ + KG+ G + + GKV +H A S
Sbjct: 302 LNGVYLADDNQHVDYHTQITHLAPGCSSQQLYKGVIQGHARAVFNGKVIIHPEAQQSNAK 361
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
++LL+ +N T P ++ H AT ++ + LFY RGI E+ A A +
Sbjct: 362 QLNNNLLLSDNGEVDTKPELQIYADDVICNHGATVGQLDTQALFYLQSRGISEKDAQACL 421
Query: 457 VNGFVREVLQKLPMEFAVEAQKL-IDISLEGSVG 489
V+GFV E+L+++ +L I L+ VG
Sbjct: 422 VDGFVGELLERINHLSLRNFIQLSISAQLKQLVG 455
>gi|268317574|ref|YP_003291293.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
gi|262335108|gb|ACY48905.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
Length = 444
Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats.
Identities = 76/416 (18%), Positives = 150/416 (36%), Gaps = 26/416 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ R A R+ + P + A + + A + + V +
Sbjct: 35 LAALRRKAIERFGVLGFP---GRKSEAWKYTPIAK--ALQHPYRIDPVPAVPALNEQALA 89
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
IP + + V V S + E GV+ + EA H DL
Sbjct: 90 DYAIPELDAYRVVLVNGRFVPEL------STTSDLPE-----GVVLTGLEEAARRHADLF 138
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY-FRINEKGTGQFERTL 232
+KY + + + + ALN+A DG F+Y+P+G + ++ R +
Sbjct: 139 EKYFAHYLDFENEPFLALNTAFARDGFFLYVPEGTALERPVHVLNLIDTDEELFLQPRNV 198
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
++A G+ + + + + V E+ AE+ ++ S
Sbjct: 199 VVAAPGASLKLVTSGHSRA-AQRTFTNGVTEVFVGQGAEVHQYDLRLEGEAASGI----- 252
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
F T+ G ++ + L G A+ ++ Y + + G ID+
Sbjct: 253 -FSTQAYLEGG--ARYTNGTLTLGGALVRNNVYVRFDDQEGEANLYGLFLGRGSMHIDNH 309
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + S + KGI + + GKV V A + + S+++ ++
Sbjct: 310 TMIDHAVPHCVSNELYKGILDDEATGVFNGKVLVRPHAQKTNAYQSNKSIVLTREARMYS 369
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H A ++ ++ +FY RG+ + A A+++ F R+VL ++
Sbjct: 370 KPELEIYADDVRCTHGAAIGQLDEDGIFYLRARGLTLQKARAMMLLAFARDVLDQI 425
>gi|42519065|ref|NP_964995.1| hypothetical protein LJ1139 [Lactobacillus johnsonii NCC 533]
gi|41583352|gb|AAS08961.1| hypothetical protein LJ_1139 [Lactobacillus johnsonii NCC 533]
Length = 401
Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats.
Identities = 90/453 (19%), Positives = 166/453 (36%), Gaps = 60/453 (13%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L ++ + S K NE W+ + R+ ++ R + P R Y + P S
Sbjct: 2 LTKENLLNFSHKNNESSWLTDLRIKSFERLEELDYPKMQRFSYHDWPL--IKKEDFPWSN 59
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
SL + ++ L+K
Sbjct: 60 QADFSLKEE--------------------------------------------QKLLEKK 75
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G+I I A ++P+LV+ L +V+ ++ A + A G F+YIPK ++
Sbjct: 76 GIILTDIFTASKKYPELVQSTLGSVIKHNEDKLTAYHYAYLNSGLFLYIPKDTILTEPIT 135
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ LI+AD S V +LE + + + +VEL+A + I++S
Sbjct: 136 ISLSPTQDT--YISHLLIVADNNSKVKFLEEIQD-KDKKASSASLMVELIARPGSHIEFS 192
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ R + + W T L GE S
Sbjct: 193 SLDELSQD--------TTLYFNRRAKIEKDAHVEWAIAFMNDCNTLGDLDSELVGEGSFA 244
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +IA++ G Q++ ++ + ++T I +G+ S + G + GA S+
Sbjct: 245 DSKAIAVTTGDQRVGINNRVTNRGPHSTGLINQRGVLLENSRLIFNGIGQIVHGAHGSKA 304
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
Q L++ + P + + H A+ + + Y + RGIP + A L
Sbjct: 305 DQQNRVLMMSDEAHGDANPLLLIDENDVIAAHAASVGPVDKVQMNYLMSRGIPYDQAQRL 364
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ GF+ VL +P + +K+IDI LE +
Sbjct: 365 VIRGFLGAVLDAIPNKDVR--RKMIDI-LERKL 394
>gi|224536658|ref|ZP_03677197.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521749|gb|EEF90854.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
Length = 447
Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats.
Identities = 89/413 (21%), Positives = 151/413 (36%), Gaps = 28/413 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ + P + LD I
Sbjct: 30 RATAFADFERLGFPTRKQEKY---KYTDVSKFFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + GVIF + E +HP+LVKKY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPASHLPEGVIFGSLKEMAAKHPELVKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG +YIPK V + + R LI+
Sbjct: 133 YGKLADTSKDGVTAFNTAFAQDGVLLYIPKNVALERPIQLVNILRGDVNFLVNRRVLIVL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C N L V+E+ +NA + + +
Sbjct: 193 EDGAQARMLV-CDHAMDAVNFLATQVIEVFVGENAVFDLYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + + LL GE + +AI++ Q +D+ T +
Sbjct: 244 SNMYVKQEANSNVLLNGMTLHNGTSRNTTEVLLAGEGAEVNLCGMAIADKNQHVDNNTSI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTNSQQTNRNLCATREARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H AT ++ + LFY QRGIP A L++ FV EV+ +
Sbjct: 364 LEIYADDVKCSHGATVGQLDENALFYMRQRGIPAREARLLLMFAFVNEVIDTI 416
>gi|218245299|ref|YP_002370670.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|257058334|ref|YP_003136222.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
gi|218165777|gb|ACK64514.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|256588500|gb|ACU99386.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
Length = 455
Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats.
Identities = 76/424 (17%), Positives = 150/424 (35%), Gaps = 37/424 (8%)
Query: 57 WRLLAYRR-WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
R AYR + P+ + F DL + P+S + T
Sbjct: 43 RRNAAYRIDKEEVPFPT---THHEEWRFTDLSELYQIRFDPRPRSTTILS----DTLAPF 95
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+P + L V + ++ GV + E + V
Sbjct: 96 ILPEAKLSSLIFVNGEFAPELSNLAALP-----------DGVYVGNLMGLSSEKREKVVN 144
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTLI 233
YL+ + + +N+A + V++ V + + F R L+
Sbjct: 145 YLAKH-DGAKDVFTLMNTADMYHIAIVWVDPNVTVDIPIFLLFLTVASHIHNIIQPRVLV 203
Query: 234 IADEGSYVSYLEG-------CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
IA+ GS + +E C+ ++ V E+ DNA++ ++ VQ
Sbjct: 204 IAETGSSLQLVEHYGAISEDCSDLAHNKAYFTNTVTEIWVKDNAQVNHTRVQRELGDSFH 263
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ K + S+ + T++ G+ ++ G+Q+ + + G
Sbjct: 264 --------IGKTAIAQSQDSRYTCTEINLGAKLSRHTLEVFQHGKQTETYLNGLTMVGGK 315
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q D+ + + + + K I + + GK+ V + A + +LL+
Sbjct: 316 QVADTHSAVFLNHSYGMAHQLHKCIIDDEARGVFNGKIFVPKAAQLTNATQLNRNLLLSP 375
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+T P ++ + H AT S++ + LFY RG+ E A L+++ F E+L
Sbjct: 376 KARINTKPELQITADNVKCSHGATISQLESDELFYLQSRGLTESDARNLLIDAFAAEILD 435
Query: 467 KLPM 470
K+P+
Sbjct: 436 KIPL 439
>gi|307152986|ref|YP_003888370.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
gi|306983214|gb|ADN15095.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
Length = 449
Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats.
Identities = 80/442 (18%), Positives = 165/442 (37%), Gaps = 44/442 (9%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
+E+ I I E +++ + R A + P+ + F D+ +
Sbjct: 27 SEEKIAVI-----EAEFLQQIRQQATATVGQLALPT---KKDEEWRFTDISELQ--QQNF 76
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ ++ + ++++ +P IL V V+ + + E K G
Sbjct: 77 SAATPVNLTADSIKSF---ILPETANSIL-------VFVNGFYAPELSNLSALPEGVKVG 126
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
+ +E + YL + ++ALN+A TD + V+ GV +
Sbjct: 127 NLASIPTE-------KISVYLGKQNEQTE-IFSALNTAGLTDVAVVWTEAGVTVDSSIQL 178
Query: 217 YFRINEKGTGQF--ERTLIIADEGSYVSYLEGCTAPQRDENQ------LHAAVVELVALD 268
F + T F R L++A++ S + +E + +V E+ +
Sbjct: 179 LFLTVKTETPIFTQPRVLVVAEKHSSLQIIEDYRVITNSCSHLSDNTYFTNSVTEIWLEE 238
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
NA++ +S +Q + K + S + ++ G +
Sbjct: 239 NAQVNHSRIQREAGKSFH--------IAKSTIAQKRDSNYTINEINFGGKLYRHNLEIFQ 290
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
+GEQ+ + I Q D+ + + T+ + K I ++ + GKV V +
Sbjct: 291 QGEQTQTTLNGLTIIGDKQVSDTHSAVYLNHPYGTTNQLHKCIIDHSAHAIFNGKVFVPK 350
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
A + +LLI +T P ++ + H AT S++ + LFY RG+
Sbjct: 351 PAQMTNAAQLNRNLLISPKARVNTKPELQITADNVKCSHGATVSQLEADELFYLRSRGLT 410
Query: 449 EEAAIALIVNGFVREVLQKLPM 470
EE A L+++ F +++ ++P+
Sbjct: 411 EEDARHLLIDAFAADIIDRIPV 432
>gi|119509160|ref|ZP_01628311.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
gi|119466326|gb|EAW47212.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
Length = 457
Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats.
Identities = 86/425 (20%), Positives = 157/425 (36%), Gaps = 36/425 (8%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
D+ E R A P+ R F DL + V Q
Sbjct: 43 DYFQELRQGAANWVRHSSIPT---TREEEWRFTDLSALRQVQFHVETQLKSV-------D 92
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L +P L V + SGV+ ++ +
Sbjct: 93 ISALTLPEAVNSRLVFVNGVYAPDLSAV-----------ADLPSGVVVGNLAGFSKSQQE 141
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--E 229
+VK YL+ + F A LN+A +D + V++ + V + F
Sbjct: 142 IVKHYLAQAEGSQEVFTA-LNTAGISDAAVVWVAQNVIVETPIHLLFVAVVGEQATISQP 200
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDEN----QLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
R L++A+ G V+ +E + E+ L AV E+ +NA++ ++ ++
Sbjct: 201 RCLVMAETGGSVTVVEDFINHRGAEDAEGVYLTNAVTEVWLGENAQVSHTRIEREGAEAF 260
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
V K + S+ + L G ++ L GEQ+ + + +
Sbjct: 261 H--------VGKTAVTQARDSRYTCHALSFGGKLSRHNLEILQTGEQTETTLNGLTMISD 312
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q D+ + + ++TS + K I ++ + GKV V + A + +LL+
Sbjct: 313 RQVGDTHSAIALNYPHSTSTQLHKCIVGDRAHAVFNGKVFVPKAAQLTNAGQLNRNLLLS 372
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+ T P +E + H AT S++ D+ +FY RGI E+ A L++N F E++
Sbjct: 373 SKARVDTKPQLEITADNVKCAHGATVSQLEDDEIFYLQSRGINEDDARKLLINAFAAEII 432
Query: 466 QKLPM 470
++P+
Sbjct: 433 NQIPV 437
>gi|163796147|ref|ZP_02190109.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
gi|159178606|gb|EDP63146.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
Length = 429
Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats.
Identities = 89/428 (20%), Positives = 154/428 (35%), Gaps = 47/428 (10%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
PDW++ R A R+ + P R A F L A + + V P L
Sbjct: 20 PDWLVAQRRSAIARYRQIGLP---GARTEAWKFTGLNALKALQPVAAEGPAPTVLPAALA 76
Query: 111 TYEKLGIPIREQ--EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
++ I + E L V + ++ D +V +E L
Sbjct: 77 ELDRTEIRVANGRAESLPSSLPGGVEIVSLDDPATVPGWVRESL---------------- 120
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ- 227
+V + + +AALN+A FT G + I +GV + +
Sbjct: 121 ---------GSVSSIDSHPFAALNAAQFTGGVAIRIARGVMPEAPILLSMATSGGDGATA 171
Query: 228 --FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
R L++ +EG+ + T Q + V E++ A + +S +Q
Sbjct: 172 IAHPRVLVVVEEGASADLV---TVHQGTGAYMANPVTEIIVGAGARLSHSVLQAEAAEAF 228
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
V ++ L TG+ + L G + + G
Sbjct: 229 H--------VAMTSVRLADKATYDGFVLATGARLARHEVRAELAGRHIDYRINGVYLGAG 280
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q D T + H + S + KG+ G S ++GK+ V A + F +LL+
Sbjct: 281 DQHHDLTTFIDHAQPHGASHEMVKGVLTGRSRGVFQGKILVRPNAQKTDGFQMNRALLLS 340
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE-- 463
+ + P +E H AT ++ D+ LFY + RGIP+ A AL+V +V E
Sbjct: 341 RDAEVDSKPELEIYADDVKCSHGATVGELDDDQLFYLMARGIPKARARALLVEAYVLEAI 400
Query: 464 -VLQKLPM 470
++ ++P+
Sbjct: 401 ALIARIPV 408
>gi|254498596|ref|ZP_05111316.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
gi|254352187|gb|EET11002.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
Length = 397
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 93/426 (21%), Positives = 154/426 (36%), Gaps = 34/426 (7%)
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A P + + L V + +PI
Sbjct: 4 KALADLQERGFP---GRHDEEWKYTRVDALLKQPFAAYHHGLAAVP-------KASDLPI 53
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
Q ++ S V V A + +GV+ +P++ A+ HP+L+K YL
Sbjct: 54 ASQIVIHNGLISGVEVLA-------------KTLPAGVLVLPLAAALISHPELLKPYLGM 100
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++ ++ + LN+A+ G +Y+P GV ++ ++ R +IIA+ GS
Sbjct: 101 ILKQ-EHGFHFLNTAMIHCGVLIYLPAGVYLDEPIALRHIQDQTNQAVHLRHVIIAEAGS 159
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ +E + L V E+ NA++ + +Q T+
Sbjct: 160 QATIVEDYQGLENSC-YLTNTVTEVFMGTNAKLTHCKIQRESKAAYHLGHLSVKQSTR-- 216
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
S+ + L G S L+ E + I Q +D T + HL
Sbjct: 217 ------SEFANHSLSLGGKCVRSDLSLYLQEEHAHCLMNGIYAPAEGQHVDHHTTVHHLV 270
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
N S KGI G S + GKV V + A H+ Q +LL+ N T P +E
Sbjct: 271 PNCRSEQDYKGILTGRSRAVFNGKVLVAKDAQHTDAQQQNKNLLLSANAEVDTKPQLEIF 330
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQK 478
H AT ++ +E LFY RGI A +++ F R+ L+ +P E
Sbjct: 331 ADDVLCSHGATVGQLDEEALFYLATRGIDRVEASHYLIHAFARDNLRLIPHPKLAEFMGH 390
Query: 479 LIDISL 484
L+ L
Sbjct: 391 LLTQQL 396
>gi|323255201|gb|EGA38979.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
Length = 182
Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats.
Identities = 122/182 (67%), Positives = 152/182 (83%)
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G QQ D+GTKM+H+ KNT S I+
Sbjct: 1 MSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTRSTII 60
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
SKGISAG S N+YRG V + A ++RNFTQCDS+LIG +CGAHT PY+E +N+S LEH
Sbjct: 61 SKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFPYVECRNNSAQLEH 120
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
EATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE S
Sbjct: 121 EATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHS 180
Query: 488 VG 489
VG
Sbjct: 181 VG 182
>gi|172035921|ref|YP_001802422.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|171697375|gb|ACB50356.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
Length = 449
Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats.
Identities = 81/427 (18%), Positives = 160/427 (37%), Gaps = 37/427 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A + + PS + F DL + + V ++ +
Sbjct: 34 MQTLRKNAVSQVQELTLPS---KKDEEWRFTDLSELYQLEFQTAKT--ETVTQSIIDNF- 87
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+P +Q L V + S V+ E+ + +S+ + +
Sbjct: 88 --ILPEAQQSYLVFVNGEYSSEL------SNVSELPED-----IYVGNLSDLPDPKNNKI 134
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF--RINEKGTGQFERT 231
YL + + ALN+A F D + +++ K + + F NE + RT
Sbjct: 135 ADYLGK-QEGEKDAFTALNTAGFKDVAVIWVNKNIVVETPIQLLFLTVGNETPSLIQPRT 193
Query: 232 LIIADEGSYVSYLEGCTAPQRDEN-------QLHAAVVELVALDNAEIKYSTVQNWYPGD 284
L+IA+ GS +S++E + +V E+ +NA+I +S +Q
Sbjct: 194 LVIAETGSSLSFVEYYATVTESCSDDEKNQPYFTNSVTEIWLDNNAQINHSRIQRELGDS 253
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ K + S + ++ G+ ++ +G Q+ + + +
Sbjct: 254 FH--------IGKSAISQNQDSHYTCNEVNLGAKLSRHTLQMWQQGTQTETHLNGLTMID 305
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q D+ T + + + K I G + GK+ V + A + +LL+
Sbjct: 306 HEQLADTHTAVCLNHPYGITHQLHKCIIDGNGRGVFNGKIFVPKPAQLTNATQLNRNLLL 365
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+T P ++ + H AT S++ + LFY RG+ E A L+++ F E+
Sbjct: 366 SPKARINTKPELQITADNVKCSHGATISQLEADELFYLQSRGLNETDARHLLIDAFATEI 425
Query: 465 LQKLPME 471
L+++P+E
Sbjct: 426 LERIPLE 432
>gi|313887268|ref|ZP_07820959.1| FeS assembly protein SufD [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299231|ref|YP_004441152.1| FeS assembly protein SufD [Porphyromonas asaccharolytica DSM 20707]
gi|312923187|gb|EFR34005.1| FeS assembly protein SufD [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176294|gb|AEE11984.1| FeS assembly protein SufD [Porphyromonas asaccharolytica DSM 20707]
Length = 462
Score = 236 bits (601), Expect = 9e-60, Method: Composition-based stats.
Identities = 82/420 (19%), Positives = 155/420 (36%), Gaps = 27/420 (6%)
Query: 55 LEWRLLAYRRWL--TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
++ L A + + W R A+ AP + Q LD +
Sbjct: 37 RDFALEALNEYALPQLGMEDWQRTDVEAL--------YAPDYGINLQELDLAPAGHKQLP 88
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ + + + + + ++ GV I E + E+PDL
Sbjct: 89 QYSCDLSVNELTIKASALNSNYLYTHY-------ANQKRKLPEGVFVGSIKEFVKEYPDL 141
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY-FRINEKGTGQFERT 231
++Y + V + ALN+ D +Y+P G+ + ++ R
Sbjct: 142 AERYYGQIAEVDTDGTIALNTLFVQDAFVLYVPDGMELEQPVQLVQLLHAQEPLLCIRRW 201
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LII + + S L C N L V E+ D A++K D +
Sbjct: 202 LIIIGDRAKASVLV-CDHTIDRTNFLVNQVAEIYVGDGAQLKLF--------DMEENSHQ 252
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ +G S+++ + IT GE + +A++NG Q +D+
Sbjct: 253 THRTCAYFLRQGAESQVTLAAYTLNNGITRNSFRTRFLGEHAEQTLGGVAVTNGTQHVDT 312
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T++ H+ S + K + S + G++ V + A + + ++L+ + +
Sbjct: 313 FTRVEHIKPKCHSTQLFKNLLEEQSTGAFSGRIFVAQSAQQTEAYQSNRNMLLSSEARMY 372
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H T + +E LFY +QRGIPE A ++ FV +V+ +P+E
Sbjct: 373 SKPQLEIYADDVQCSHGMATGHLDEEALFYMMQRGIPEHEARVMLSVAFVGDVIALMPLE 432
>gi|118586903|ref|ZP_01544336.1| ABC-type Fe-S cluster assembly transport system, permease component
[Oenococcus oeni ATCC BAA-1163]
gi|118432630|gb|EAV39363.1| ABC-type Fe-S cluster assembly transport system, permease component
[Oenococcus oeni ATCC BAA-1163]
Length = 426
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 165/437 (37%), Gaps = 41/437 (9%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
+E +W+ E R A + P YP + +AP S + + +
Sbjct: 21 HEAEWLTEHRKKALSVSRDLDWP-----DYPRVLKTTFQAISAPSSWSLQEEKTFLTEKS 75
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
E+ + S+ EL+K GV+ M + EA +
Sbjct: 76 QIRIEQSNL------------------------SSLKIYLPRELQKLGVVVMNLFEAAEK 111
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
PDLV++YL +N A++ A + G +Y+P + + ++ +
Sbjct: 112 RPDLVQQYLQK---DPNNRLLAMHQAYWNCGLLIYLPNDLHLEKPIEISLTVDNYASAIE 168
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+ L I G + ++ + E +V +L+A + + V D
Sbjct: 169 QHILFITGSGVTATVVQTTKSSPGLEKVQLNSVFDLIAGPGSRLDCFAV------DQLNH 222
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
I F R G+ ++++W E S +L G S +++++ Q+
Sbjct: 223 SKISYFN--RFSRLGVDAEVNWLLAEMNLNNLVGECSAILNGNGSKANLRVVSLADRKQK 280
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
TK++H+ ++TT I +G+ Y + +GA + + LL+
Sbjct: 281 QALMTKLIHIGQHTTGNINQRGVILQDGRLIYNAVGKIVKGAHGANSEQSSRILLLSPTA 340
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P + + H A+ ++S E L+Y + RG+ + A L+V GF ++L +L
Sbjct: 341 TGDANPILLIDENDVEAGHAASIGRVSPEQLYYLMSRGLTVDRARQLLVKGFFDDLLDRL 400
Query: 469 PME-FAVEAQKLIDISL 484
P+E E + ++ L
Sbjct: 401 PIENLRAELDQALERRL 417
>gi|224025202|ref|ZP_03643568.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
gi|224018438|gb|EEF76436.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
Length = 450
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 165/438 (37%), Gaps = 37/438 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + Y + D+ Y AP + +L I
Sbjct: 33 RSKAFADFERLGFPTRKQEDY---KYTDVGRYFAPDYGLN--------------LNRLEI 75
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + GV F + E P+L+KKY
Sbjct: 76 PVNPYEVFKCDVPNMSTSLYFVVNDAFDRHDSPTASLPEGVEFGSLCEIATRRPELIKKY 135
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL-IIA 235
+ + ++ AA N+ DG +Y+PKGV + + R L II
Sbjct: 136 YAHLADTSEDALAAFNTLFAQDGVVMYVPKGVVVERPIQLVNILRADVATLVNRRLLIIL 195
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C + N L V E+ +NA + ++ ++
Sbjct: 196 EEGAQAKLLI-CDHAMDEVNFLSTQVAEVFVGENASLDLYELEE------------THYS 242
Query: 296 TKR----GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
T R + S++ + + T +L G + + +AI++ +Q+D+
Sbjct: 243 TVRFSNLYVHQSAGSRVLLNGVTLHNGTTRNRVHVVLDGPGAEVDLCGMAIADRDEQVDN 302
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H A TS + K + + + GKV V GA + + +L + +
Sbjct: 303 HTFIDHRAPACTSNELFKYVLDERAVGAFAGKVLVRPGAERTSSLQTNRNLCVTREARMY 362
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT ++ + LFY QRG+ A L++ FV EV ++ ME
Sbjct: 363 TQPQLEIYADDVKCSHGATVGQLDENALFYMQQRGVSLREARLLLMFAFVNEVTDRIRME 422
Query: 472 -FAVEAQKLIDISLEGSV 488
+L++ G +
Sbjct: 423 ALRDRLHQLVEKRFRGEL 440
>gi|317495202|ref|ZP_07953572.1| FeS assembly protein SufD [Gemella moribillum M424]
gi|316914624|gb|EFV36100.1| FeS assembly protein SufD [Gemella moribillum M424]
Length = 428
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/451 (18%), Positives = 167/451 (37%), Gaps = 36/451 (7%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ ++ I + EP W L R LA R T+ P + + ++
Sbjct: 8 LSIKTLQNIFSNTEEPTWFLNTRKLALYRSYTLPFPKLESMNLDNWNLFNI--------- 58
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ L + ++ + V + +VV E +
Sbjct: 59 ---------------DFSTLRLEEMNTLDISNYGLEQDDFAIVQKNNTVVHVSIPEKYRD 103
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VI I A+ + D +K +VV +N A++ + G F+ + + + L
Sbjct: 104 KVIIKDIFSAMND--DHIKDSFMSVVDYAENKVTAVHYTLLNAGLFIDVKENIVIEEPLQ 161
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
Y I++K F I E S +++E +++ + V E+V + A+I YS
Sbjct: 162 -YIVISDKEQSLFNHVTINVGENSTFNFIENYINTTKEDKAPFSFVSEVVTHEGAKINYS 220
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ N R S I+W A + + + G+ S
Sbjct: 221 SITNQPREKRG--------TILRRGLTFKNSLINWNVAAMDEADVYHDNTTNILGDGSEA 272
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q+ +++++ ++ I+ G+ S+ + G + +GA S
Sbjct: 273 NLKIVTLGVKEQKTYFNSEVVNQGLSSKGDILQHGVLLDKSHIVFNGVGFIVKGATGSNA 332
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L + + A P + + H A+ +I +E L+Y RG+ + + L
Sbjct: 333 YQSSRMLTLSSAAKADANPMLLIDENDVMAGHGASLGRIDEEQLYYLQSRGLTRKESSRL 392
Query: 456 IVNGFVREVLQKLPMEFAVEA-QKLIDISLE 485
+V+GF+ V+ +L ++ E LID ++
Sbjct: 393 LVHGFLSPVISELTVDKIKELVTILIDEKIK 423
>gi|167042163|gb|ABZ06896.1| putative uncharacterized protein family (UPF0051) [uncultured
marine crenarchaeote HF4000_ANIW93H17]
Length = 466
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 89/443 (20%), Positives = 180/443 (40%), Gaps = 30/443 (6%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL 101
IS+K+NEP+W+ E+R + + + +P +
Sbjct: 15 EEISSKRNEPNWLREYRKNSLSVYHDLP------------------AEVSPLYNKYTDAR 56
Query: 102 DDVDPELLRTYEKLG-IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
++ + +P + L ++ V S +ELK +G++
Sbjct: 57 KMNPEQVSLSTSSDSSVPDFLAKRLDEIKNEISIVQIG--SNIHSININDELKSNGLVIS 114
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
+ +A+ H +L++K L ++ Y ALN+A F G FVY+P+ + + +
Sbjct: 115 SLDDALQNHSELIQKALEDS-NSKEDKYTALNNAAFNSGVFVYVPQNLTLDKPIHLLSCL 173
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+ G R +IIA++ ++ S ++ AP+ + Q + ++ +N+++ ++T Q
Sbjct: 174 SLDGISTISRNIIIAEKNTHASIVQELYAPKTSKQQAYLELLNTRIGENSKLDFTTFQIM 233
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ +KI+W GS ++ L G + +
Sbjct: 234 DQSAVNFSTRRTHL--------AQDAKINWYLGLFGSMLSRYRIEYHLNGTGAAVNDAVV 285
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
N Q D + H A++T +IV K I S + ++G V ++ AAHS +F
Sbjct: 286 IFGNNDQSFDLNIIVNHNAQSTEGKIVEKSILKDTSKSLFKGMVRINEQAAHSNSFLSGR 345
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+L+ + +IP +E + H A+ +++ DE +FY R + A +IV GF
Sbjct: 346 SILLSKGARSDSIPGLEIFTNDVKATHSASVAQVDDEQIFYLGTRCLSHSEAERIIVEGF 405
Query: 461 VREVLQKLPMEFAVEAQKLIDIS 483
+ + + + + +I+
Sbjct: 406 LEPLSRIMSHQVRAWLANIIESK 428
>gi|313204300|ref|YP_004042957.1| fes assembly protein sufd [Paludibacter propionicigenes WB4]
gi|312443616|gb|ADQ79972.1| FeS assembly protein SufD [Paludibacter propionicigenes WB4]
Length = 466
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 89/440 (20%), Positives = 164/440 (37%), Gaps = 32/440 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M + R ++ + ++ P+ A Y + DL + +
Sbjct: 44 MNDSRDASFALFEELRFPTTALEDY---KYSDLK--------------AALSIDYGLNIN 86
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELK-KSGVIFMPISEAICEHPD 171
++ IP+ + V + + V + T + LK GVI + E P+
Sbjct: 87 RIPIPVNPYDAFKCDVPGIQSYLFFVVNDAFYPTMDPKALKLPEGVIIGSLKEIAETRPE 146
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFER 230
L+K+Y + + A N A DG F+Y+PK V+ + +
Sbjct: 147 LLKEYYGKLSTPKKDGLVAFNGAFAQDGFFMYVPKNVQLTKPVQLVNIMRSDVDFMANSH 206
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LII +EG+ L C + L V E+ ++A ++ ++N
Sbjct: 207 NLIILEEGAKAQLLV-CDHTVDEVRFLSNRVTEVFVGEHATYEHYKLEN-------THTK 258
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
N T D R + I+ + + +T L GE + + I + QQ+D
Sbjct: 259 TTNLSTLLIDQRASSNVIANV-ITLHNGVTRNTVEIDLDGEHCETQLCGMVIGDKNQQVD 317
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ T ++H N S + K + F+ + GK+ V + A + F ++L+
Sbjct: 318 NFTSIIHNKPNCNSHELFKYVLDDFAKGGFTGKLLVAKDAQKTAAFQTNRNILLNKTAKM 377
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ--KL 468
T P +E H AT + + FY RGI E A L++ F +V++ ++
Sbjct: 378 RTKPQLEIYADDVKCSHGATIGSLDETAKFYMQSRGISEPEARLLLMFAFTNDVIEFIRI 437
Query: 469 PMEFAVEAQKLIDISLEGSV 488
P + L++ L G +
Sbjct: 438 PA-LQDRIKMLVEKRLRGEL 456
>gi|166365048|ref|YP_001657321.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|166087421|dbj|BAG02129.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
Length = 441
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 86/445 (19%), Positives = 164/445 (36%), Gaps = 46/445 (10%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ + + + K +LE R + + P + F DL A
Sbjct: 18 LSRETVPTVDNSK-----ILELRESGASKAHELAIP---GRKDEEWQFTDLSQLWAIDFR 69
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
D +P + + V + ++
Sbjct: 70 APQTVTID-----KNALATFLLPEAKNSRIVFVNGIYQPELSDISALP-----------P 113
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV ++ A D++ YL F+ ALN A +DG+ +++ +
Sbjct: 114 GVSVSNLANA---QKDVLVNYLGK--EKTPEFFTALNQAGLSDGAVIHVTANTVVTTPIH 168
Query: 216 TYFRINEKGTGQF--ERTLIIADEGSYVSYLEGCTAPQRDEN-------QLHAAVVELVA 266
F + +F +LI+A+ G+ V+ +E A + AV E+
Sbjct: 169 LLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEYCSDLPVNYSYFTNAVTEIYL 228
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
NAE+ ++ VQ I +G S+ + ++ G+ +
Sbjct: 229 EANAEVIHTRVQRESGDGFHIGRTI--------IEQGRDSRYTLNEINLGAKLCRHNLDI 280
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L +GEQ+ + +A+ G Q D+ + + + + + K I G ++ + GKV V
Sbjct: 281 LQKGEQTETNLHGLAMITGQQTTDTHSAIYLNHPHGIANQLHKCIVDGSAHAIFNGKVFV 340
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+ A + +LLI N +T P ++ + H AT S++ + LFY RG
Sbjct: 341 PKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEADDLFYLQSRG 400
Query: 447 IPEEAAIALIVNGFVREVLQKLPME 471
+ + A +L+++ F E+L K+P+E
Sbjct: 401 LSTDTARSLLIDAFSAEILAKIPLE 425
>gi|53804903|ref|YP_113468.1| FeS assembly protein SufD [Methylococcus capsulatus str. Bath]
gi|53758664|gb|AAU92955.1| FeS assembly protein SufD [Methylococcus capsulatus str. Bath]
Length = 434
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 73/419 (17%), Positives = 136/419 (32%), Gaps = 23/419 (5%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
NEP W+ R A R+ PS R + + S D E
Sbjct: 19 NEPAWLSRARRQALARFEASGFPSP---RDEEWRYTHVAPIERKLFTAATGSADTDAAEA 75
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
L E +A + +S + + +
Sbjct: 76 L----------IESCRIADAWSLVFVDGMFVPGLSERHGLPAGVTLESLASLLALSEADG 125
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+ ++ L + + N+A FTDG+ + + +GV + +F
Sbjct: 126 NAAWLESGLERETESDRHGFLDFNTAFFTDGAVLRLEEGVALEKPVQLFFVSTRNDGRST 185
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R LI + +E P A V ++ DN + + +Q
Sbjct: 186 LRNLIRIGRNAEARVVETHVGPPETGYLG-AVVNQIEVADNGGLNHYKLQ-------LDG 237
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
G Y+F + L G + L G + E + +S Q
Sbjct: 238 GRAYHFG-GSYARVARDGRFGHHLLSLGGLLVRNEVHARL-GHAAQTEMNGVFLSENRQH 295
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+ ++ H + +SR+ +GI S ++G++ VH A + +LL+ ++
Sbjct: 296 VDNHIRVDHDEPHGSSRVSYRGILEDRSRGVFQGRIVVHADAQKTDAEMNNRNLLLSDDA 355
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H T ++ + +FY RGI A ++ F E++++
Sbjct: 356 EIDTKPQLEIHADDVKCAHGVTIGQLDPDSVFYLESRGIDAATAREMLTFAFAAEIVER 414
>gi|119493189|ref|ZP_01624064.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
gi|119452754|gb|EAW33931.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
Length = 446
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 77/426 (18%), Positives = 150/426 (35%), Gaps = 37/426 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A P+ + F DL V + + ++
Sbjct: 33 LQDLRDRAATELQDKAIPT---QKEEDWRFTDLSGLLQVNFQVA-KPMQLTPEDI----S 84
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
L +P E L V + F G+ + D +
Sbjct: 85 PLTLPEAENSCLVFVDGEYAPHLSTFSQT------------DGIFAGNLGNLPASFGDRI 132
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERT 231
YL + + ALN+A TD + +++ K L F T + R
Sbjct: 133 DDYLDKQQGNSE-IFTALNTASLTDIAIIWVGKNQAVETPLHLLFISTADDTPRMSQPRA 191
Query: 232 LIIADEGSYVSYLEGCTAPQRD------ENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
L++A+ GS +++E + + +V E+ +NAE+K++ VQ P
Sbjct: 192 LVVAETGSSCTFIEHYASLEDCSGFSTHHPYFVNSVTEIWIEENAEVKHTRVQRDAPQAF 251
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
+ + + S+ + + G+ ++ GE + + +
Sbjct: 252 H--------IGRTAISQARTSRYTLNTISLGAKLSRHNLDLYQAGEGTETTLNGLTLIGE 303
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q D+ + ++ V K I + + G+V V + A + +LL+
Sbjct: 304 EQLADTHSATFFNHQHGIYNQVHKCILDDRARGVFNGRVVVSQAAQLTNANQLSQNLLLS 363
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+T P +E H AT S++ D+ +FY RG+ + + L+++ F E+L
Sbjct: 364 PQARINTKPQLEIVADDVKCSHGATVSQLEDDEIFYLRSRGLDDRMSRHLLIDAFASEIL 423
Query: 466 QKLPME 471
QKLP++
Sbjct: 424 QKLPLD 429
>gi|189459831|ref|ZP_03008616.1| hypothetical protein BACCOP_00461 [Bacteroides coprocola DSM 17136]
gi|189433441|gb|EDV02426.1| hypothetical protein BACCOP_00461 [Bacteroides coprocola DSM 17136]
Length = 447
Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats.
Identities = 86/433 (19%), Positives = 156/433 (36%), Gaps = 27/433 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + ++ Y AP + L + ++
Sbjct: 30 RAKAFADFERLGFPTRKQEKY---KYTEVSKYFAPDYGLNLNRL-EFPVNPYEVFK---- 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V ++ V + GVIF + + +HP+LVKKY
Sbjct: 82 --------CDVPNMSTSLYFVVNDAFDKHVHPSAQLPEGVIFGSLKDVAEQHPELVKKYY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ + A N+ DG+ +Y+PK V + + T R LII +
Sbjct: 134 GKLADTSKDGVVAFNTMFAQDGALMYVPKNVVMERPVQLVNILRADVNTMVNRRILIILE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ L C + N L VVE +NA + +
Sbjct: 194 EGAQAKLLI-CDHAMDEVNFLSTQVVEAFIGENAVFDLYEL--------EETHNSTVRFN 244
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + + + T L G + +AI++ +Q+D+ T +
Sbjct: 245 NLYVHQEANSNVLLNGMTLHNGTTRNTTEVTLAGRGAEVNLCGMAIADKNEQVDNNTFID 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + TS + K + + + GK+ V GA H+ + ++ +T P +
Sbjct: 305 HQVSDCTSNELFKYVLDDQAVGAFAGKILVREGAQHTSSQQTNRNICATREARMYTQPQL 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVE 475
E H AT ++ + LFY QRGI + A L++ FV EV+ + M+
Sbjct: 365 EIYADDVKCSHGATVGQLDENALFYMRQRGISLKEARLLLMFAFVNEVIDNIRMDALKDR 424
Query: 476 AQKLIDISLEGSV 488
L++ G +
Sbjct: 425 LHLLVEKRFRGEL 437
>gi|332284498|ref|YP_004416409.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
gi|330428451|gb|AEC19785.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
Length = 435
Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats.
Identities = 76/419 (18%), Positives = 139/419 (33%), Gaps = 32/419 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ R A R+ + P+ + S+ + +
Sbjct: 25 WLAAMRKRAIERFASEGWPT---TKQENW---------RHTSLATLEQQSFLPAGQASVA 72
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ + Q V D FD G + +S A+ + PD
Sbjct: 73 D-----LVNQVRANESGHWLVFTDGRFDPALSDIG----DLPGGAQILALSAALADSPDT 123
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
V+ AALN A+ +DG+ + + +GV + F + F R L
Sbjct: 124 VQDLFGD--ETQGASTAALNLALASDGAVIRLARGVELEKPVHLIFIAASQQAASFPRNL 181
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I A+ GS +E Q L V +A + + +Q+
Sbjct: 182 IQAEAGSRAVIVEHYLG-QNSGASLTNTVTRAQLAADAHVTHLKLQHEDEQAVHLG---- 236
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ S + + G+ + + G+ + NG + +D
Sbjct: 237 ----AIDVVQATGSVYNSHSMSFGARLARHDIATDFSGDHCEALLNGLYYVNGRRHVDHH 292
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + S +G+ A + + G++ V GA + + DSLL+ A
Sbjct: 293 TLIGHSKPHGVSHEYYRGVLADTARGVFSGRILVAPGADKTDAVQRSDSLLLSRMAKADA 352
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E H AT +I ++ LFY RG+ E +A +++ F E + ++ E
Sbjct: 353 RPELEIYADDVKCAHGATVGQIDEDSLFYLRTRGLDESSARSVLTYAFAAEAVARIEPE 411
>gi|260910874|ref|ZP_05917518.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635025|gb|EEX53071.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 447
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 87/432 (20%), Positives = 168/432 (38%), Gaps = 27/432 (6%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A+ + + P+ +Y + D+ P + Q L +
Sbjct: 29 LREAAFEDFKRLGFPTRKTEKY---KYTDISKLFEPDFGLNLQRLP------------IP 73
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I E + S V D+ T ++L GV+ + E ++PD + KY
Sbjct: 74 INPYEVFSCDVPRLSTANHFVVNDAFLHPTMPHKQLPD-GVVITSLCEYAEKNPDFIAKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-LIIA 235
+ ++ ALN+ + DG VY+P+GV+ + ++ + R LII
Sbjct: 133 YGKLASTAEDGVTALNTMLAQDGLLVYVPRGVKIEQTIQVINILHAEVDLMVNRRVLIIV 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+ + +L C D + L V+E DNA + ++ + + + V
Sbjct: 193 EPQAEAKFLF-CDHTFDDRHFLATQVIEAFVGDNARLDLYCMEETHEKNVR--------V 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S+++ + + +T S RGE + I++ Q +D+ T +
Sbjct: 244 SSVYIEQQASSRVNHNVITLHNGVTRNNVSLTFRGEGAECNLSGCVIADKKQHVDNNTVI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N S + K + + + G V V + A H+ + + ++ +T P
Sbjct: 304 DHAVPNCNSHELYKYVLDDEAVGAFAGLVLVRQDAQHTDSEMRNQNICATKKAHMYTQPM 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H +T +++D LFY QRG+ E+ A L+ F+ EV+ ++ +E E
Sbjct: 364 LEIYADDVKCSHGSTVGQLNDAALFYMRQRGVSEKEAKLLLEFAFINEVIDQMDLEPLRE 423
Query: 476 -AQKLIDISLEG 486
L++ G
Sbjct: 424 RLHHLVEKRFRG 435
>gi|297172431|gb|ADI23405.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [uncultured gamma proteobacterium
HF0770_28K04]
Length = 466
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 95/436 (21%), Positives = 180/436 (41%), Gaps = 32/436 (7%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLTMK-DPSWARIRYPAIDFDDLYYYAAPKSIVGPQS 100
IS+K+NEP+W+ E+R + + + + S +Y + P+
Sbjct: 15 EEISSKRNEPNWLREYRKNSLSVYHDLPAEVSPLYNKYTD------------ARKMNPEQ 62
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + L + E + G+ S +ELK +G++
Sbjct: 63 VSLSTSSDSSVPDFLAKRLDEIKNEIGI--------VQIGSNIHSININDELKSNGLVIS 114
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
+ +A+ H L++K L ++ Y ALN+A F G FVY+P+ + + +
Sbjct: 115 SLDDALQNHSKLIQKALEDS-DSKEDKYTALNNAAFNSGVFVYVPQNLTLDKPIHLVSCL 173
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+ G R +IIA++ + S ++ AP+ + Q + ++ +N+++ ++T Q
Sbjct: 174 SLDGISTISRNIIIAEKNTQASIVQELYAPKMSKQQAYLELLNTRIGENSKLDFTTFQIM 233
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ +KI+W GS ++ L G S +
Sbjct: 234 DQSAVNFSTRRTHL--------AQDAKINWYLGLFGSMLSRYRIEYHLNGTGSAVNDAEV 285
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
N Q D + H A++T +IV K I S + ++G V ++ AAHS +F
Sbjct: 286 IFGNNDQSFDLNIIVNHNAQSTEGKIVEKSILKDTSKSLFKGMVRINEQAAHSNSFLSGR 345
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+L+ + +IP +E + H A+ +++ DE +FY R + A +IV GF
Sbjct: 346 SILLSKGAKSDSIPGLEIFTNDVKATHSASVAQVDDEQIFYLGTRCLSHSEAERIIVEGF 405
Query: 461 VREVLQKLPMEFAVEA 476
+ L ++ M + V A
Sbjct: 406 LEP-LSRI-MSYQVRA 419
>gi|307544376|ref|YP_003896855.1| Fe-S cluster assembly protein SufD [Halomonas elongata DSM 2581]
gi|307216400|emb|CBV41670.1| K09015 Fe-S cluster assembly protein SufD [Halomonas elongata DSM
2581]
Length = 448
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 87/433 (20%), Positives = 153/433 (35%), Gaps = 31/433 (7%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
+EP W+ R R+ + P R + D+ A ++ +
Sbjct: 20 DEPTWIAARRQAGAARFEALGFP---HRRVEEWKYTDVRDIARNDFVLTENADFSPAAAA 76
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
T L + + GV ++ GV +P+S A+ E
Sbjct: 77 ALT---LPLDAHRLTFVDGVFAPALSDLGSL--------------PEGVQVLPLSRALEE 119
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF--RINEKGTG 226
+ + V L + V + +AALN+A +G+ V + + F R E+
Sbjct: 120 NHEAVGGPLGRLTGVDFSSFAALNTAFMEEGAVVRLAPRTVVDKPIVLQFLSRAGEQDVM 179
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R L+ A S + +E N V E++ A + + +Q D
Sbjct: 180 SHPRILVEAGGRSEATLIEHHVGEAEAAN-FTNLVEEIILERGAILTHYKLQEAPLKDRH 238
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ + S+ L G + L GE + + + G
Sbjct: 239 --------IASIHVEQARDSRYVSFNLNLGGGLVRNDLVSELNGEGAEAIYNGLFYGQGR 290
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q +D+ T + H A T SR KGI ++ + GKV V R + +LL+ +
Sbjct: 291 QHVDNHTLVNHNAPRTFSRENYKGILDDRAHGVFNGKVIVKRDSQQIEADQSNANLLLSD 350
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H ATT ++ +E ++ RGI E+ A L+ F EV++
Sbjct: 351 RAEIDTKPELEIYADDVKCAHGATTGQLDEEAVYALRTRGIDEQTARGLLTLAFAGEVME 410
Query: 467 KLPMEFAVEAQKL 479
+ ++ E +L
Sbjct: 411 LVDLDAVSERVEL 423
>gi|254515561|ref|ZP_05127621.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
gi|219675283|gb|EED31649.1| FeS assembly protein SufD [gamma proteobacterium NOR5-3]
Length = 430
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 75/423 (17%), Positives = 144/423 (34%), Gaps = 32/423 (7%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ + W P+ R + L D L
Sbjct: 13 PHWLQSVQARGLTFWEGASMPT---RRTENWKYTGLSAL--------------RDDYALA 55
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
E + E + V VD ++ T + GV +A
Sbjct: 56 DAETSLESLPENLAAGFGGSRLVFVDGIYQPALSNTAHAD-----GVQVCRFDDASEAQA 110
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQF 228
D + ++L+T + V D+ +AALN+A DG FV I + + ++
Sbjct: 111 DRIAEHLNTSLDVEDHLFAALNTATLRDGVFVEIAANASVDAPVEVLYLVSAAAAPIAIN 170
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+R L++A G+ + +E + + EL+ NA + + +
Sbjct: 171 QRLLVLAQTGACATIVEHFVSLDAANESFCNGMTELLLAPNARLSHYRIHEESGNAVHIG 230
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
G + + L GS + G + + + G +
Sbjct: 231 G--------VHARLDRDAHLESFHLALGSVLKRFDLVVNHAGPGAYASLNGVYLPRGDEH 282
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
ID T + H + + V +GI A + + G++ +H A +R +LL
Sbjct: 283 IDYHTTIEHAVPHCDTDEVFRGIIADRATAVFNGRIHIHPDAQKTRAELSNKNLLTSAEA 342
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++ P +E H AT +++ + + Y RG+ + A ++ GF+ E+++ L
Sbjct: 343 QINSKPELEIYADDVQCAHGATVAQLDELAMHYLRTRGVSRDEAEVMLSFGFINELIEAL 402
Query: 469 PME 471
+E
Sbjct: 403 KLE 405
>gi|255532926|ref|YP_003093298.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
gi|255345910|gb|ACU05236.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
Length = 436
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 85/427 (19%), Positives = 157/427 (36%), Gaps = 28/427 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R + + + P++ + + V + + I
Sbjct: 27 RKNNFDAFNKIGLPTF---HTEEWKYTGISNL----FDREYNLTSAVLESTVTVADVDAI 79
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKY 176
+ + V V+ F++ ++ + P++EA + +V +
Sbjct: 80 RLPGHK----TANELVFVNGHFNTALSNIR----SSETELTVQPLTEAAQGTYKTIVAAH 131
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN--EKGTGQFERTLII 234
L+ + ALN A G FVY+ KG L Y ++ + R+L+
Sbjct: 132 LNKSSTYIKDGVHALNGAFIAGGVFVYLHKGKLPEHPLYIYHILDGRAEHILAQPRSLVY 191
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
DE S + E A + V+ELV NA ++Y +QN SQ
Sbjct: 192 VDESSTLKLTE-VYASVGTSDTFCNEVMELVVEKNAYVEYYKIQNDRANASQVS---TTH 247
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+T+ G RS + + I + +L + Y + + G D+ T
Sbjct: 248 ITQIG-----RSYVHTVTITLSGNIVRNNMNLVLDAPGNEAHLYGLYLLKGKTHADNHTL 302
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ + N S KGI+A FS + G++ V A + + ++L+ +N +T P
Sbjct: 303 IDNRQANCFSNQFYKGIAADFSTAVFNGRIMVQPDAQKTNAYQSNKNILLSDNATINTKP 362
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FA 473
+E H T ++ +E LFY RGIP+ A L++ + ++L ++ E
Sbjct: 363 QLEIFADDVKCSHGCTVGQLDEEALFYLRARGIPKAKAEVLLLQAYATDILDQIKSEPLR 422
Query: 474 VEAQKLI 480
+KLI
Sbjct: 423 KYVEKLI 429
>gi|51893173|ref|YP_075864.1| hypothetical protein STH2035 [Symbiobacterium thermophilum IAM
14863]
gi|51856862|dbj|BAD41020.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 382
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 92/393 (23%), Positives = 169/393 (43%), Gaps = 16/393 (4%)
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
++ P+ L++ E L +P + E A +TS +D + + +
Sbjct: 2 PTVTEPRFLEERRKAAQTLTETLSLPAKTDE--AWRRTSLEGLDVLQYRPTAARVTLKGS 59
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
GV+F + +A EH +LV++YL + P+ N A +A G +Y+P+GV
Sbjct: 60 VPEGVVFANLLDAAAEHAELVQRYLGRLFPMDQNLLTAAQAAHLNGGVLLYVPRGVVVEE 119
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
L + G Q+ TL+IA++ + V+ LE + VVE+ L A +
Sbjct: 120 PLEVV-FEAQDGEAQYLHTLVIAEDNAEVTLLERYEGTGDYLSVH---VVEVFPLQGARV 175
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+Y +QN T R G + + W E G A+ + GE
Sbjct: 176 RYGYLQNHSQDAWAF--------TFRRGLTGRDATLDWAGGEFGGALVRSEIVNDVSGEG 227
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
S + + G Q D +H + S I+ +G+ +G ++ +RG ++ A H
Sbjct: 228 SQSNLKVVFGATGRQHQDIVASQVHNGSYSRSDILGRGVLSGHAHTVFRGNGQINPAAKH 287
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEA 451
++ F + +L++ A +IP + H AT ++ +E LFY + RG+ +
Sbjct: 288 AQTFQRQQALVLSETARADSIPALIINEHEVEGAGHAATVGQLDEEQLFYLMARGLTRQE 347
Query: 452 AIALIVNGFVREVLQKLPM-EFAVEAQKLIDIS 483
A+ ++V F+ VL+++P+ E E +L+
Sbjct: 348 AVRMLVLAFLSPVLEQIPVQELRDEMIRLMGEK 380
>gi|116491133|ref|YP_810677.1| Fe-S cluster assembly ABC-type transport system, permease component
[Oenococcus oeni PSU-1]
gi|116091858|gb|ABJ57012.1| Iron-regulated ABC transporter permease protein SufD [Oenococcus
oeni PSU-1]
Length = 426
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 165/437 (37%), Gaps = 41/437 (9%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
+E +W+ E R A + P YP + +AP S + + +
Sbjct: 21 HEAEWLTEHRKKALSVSRDLDWP-----DYPRVLKTTFQAISAPSSWSLQEEKTFLTEKS 75
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
E+ + S+ EL+K GV+ M + EA +
Sbjct: 76 QIRIEQSNL------------------------SSLKIYLPRELQKLGVVVMNLFEAAEK 111
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
PDLV++YL N A++ A + G +Y+P + + ++ +
Sbjct: 112 RPDLVQQYLQK---DPHNRLLAIHQAYWNCGLLIYLPNDLHLEKPIEISLTVDNYASAIE 168
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+ L I G + ++ + E +V +L+A + + V D
Sbjct: 169 QHILFITGSGVTATVVQTTKSSTGLEKVQLNSVFDLIAGPGSRLDCFAV------DQLNH 222
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
I F R G+ ++++W E S +L G S +++++ Q+
Sbjct: 223 SKISYFN--RFSRLGVDAEVNWLLAEMNLNNLVGECSAILNGNGSKANLRVVSLADRKQK 280
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
TK++H+ ++TT I +G+ Y + +GA + + LL+
Sbjct: 281 QALMTKLIHIGQHTTGNINQRGVILQDGRLIYNAVGKIVKGAHGANSEQSSRILLLSPTA 340
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P + + H A+ ++S E L+Y + RG+ + A L+V GF ++L +L
Sbjct: 341 TGDANPILLIDENDVEAGHAASIGRVSPEQLYYLMSRGLTVDRARQLLVKGFFDDLLDRL 400
Query: 469 PME-FAVEAQKLIDISL 484
P++ VE + ++ L
Sbjct: 401 PIDNLRVELDQALERRL 417
>gi|325842549|ref|ZP_08167720.1| FeS assembly protein SufD [Turicibacter sp. HGF1]
gi|325489593|gb|EGC91957.1| FeS assembly protein SufD [Turicibacter sp. HGF1]
Length = 404
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 93/435 (21%), Positives = 161/435 (37%), Gaps = 38/435 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ + + A ++K P R F+ + Q+ + E+
Sbjct: 5 PTWVQQMQTEAQSVMPSLKLPKADRTIIKNWAFEAI----------EVQTPSTYNNEIPS 54
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
L V T V + D V + GVI + EA+ +H
Sbjct: 55 AVAHL------------VSTEDQNVVILCDGKIVYQNL--GIAFDGVIIANLEEALTKHE 100
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ K Y V V N AL+ A G F+++PK L+ + + F
Sbjct: 101 AIFKPYFMNVASVDTNRLTALHMAHLNSGLFIHVPKNKVVKEALNVIYLQ--ENGSLFNH 158
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLI+A+ S Y+E + + E V +NA++ Y+ +
Sbjct: 159 TLIVAEPNSEFKYIENYCNTV---SGNINVISETVVKENAQVDYAAMDRLTSETL----- 210
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN R ++ + T L G+ + E ++AI+ G Q+ +
Sbjct: 211 VYNL---RKARVEANGRLLVSLGALNDGNTVSENLVSLVGQGAHAEVKTVAIAEGSQKQN 267
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ HLA T IV+ GIS + T+ G +H+G S + ++++ A
Sbjct: 268 ITVNIEHLAPFTEGHIVNHGISKDDAQLTFNGIGKIHKGMNGSNAQQESRAMILSETARA 327
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
P + H A KI +E L+Y + RG+ AA LI+ GF+ + ++
Sbjct: 328 DANPILLIDEYDVKAGHAAGVGKIDEEQLYYLMSRGLTRRAAEVLIIYGFLMPFIDEIRN 387
Query: 471 E-FAVEAQKLIDISL 484
E E +K+I +
Sbjct: 388 ESIKAEFEKVIARKI 402
>gi|159896944|ref|YP_001543191.1| FeS assembly protein SufD [Herpetosiphon aurantiacus ATCC 23779]
gi|159889983|gb|ABX03063.1| FeS assembly protein SufD [Herpetosiphon aurantiacus ATCC 23779]
Length = 396
Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats.
Identities = 85/438 (19%), Positives = 157/438 (35%), Gaps = 62/438 (14%)
Query: 46 AKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
A +NEP W+ R A+ + T + P W R + D
Sbjct: 19 ASRNEPSWLTSRRREAWEAFETAEQPDWRRTNLKGFNIADYT-----------------L 61
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E + + G LA S + +V T
Sbjct: 62 AEAEVSVDFAGAEGVTILPLAEAIQSHAELVQRVLGSAVQT------------------- 102
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ ++ALN+A+ G F+++ K V + + ++ GT
Sbjct: 103 ------------------SRDPFSALNNALVNGGIFIHVAKDVAVEELVRIRYHLSNAGT 144
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
RTLI+ + S ++ +E ++ + + E+ D ++ +S+VQ
Sbjct: 145 VVAPRTLIVTERHSSINVIEEISSADFAGSAVVLTGAEIEVGDGGQVGFSSVQTL----- 199
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
+Y ++ ++ W + GSA+ L G S + + NG
Sbjct: 200 --NSNVYLLGSQ-QIRINRDAQAEWLNVVVGSAVQHVTLEANLSGNGSSVNWNGLLYGNG 256
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q + K+ H+ NT +I K + + + G V + + + + ++L +
Sbjct: 257 KQNLLVAPKLNHIGLNTEGQINFKTVVDDEAYAVFDGMVKIPATGQGTNSDLRENALHLS 316
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
N + +IP +E + H +T+ +I +E LFY RG+P A IV GFV E++
Sbjct: 317 KNSRSDSIPGLEIDANEVKAGHGSTSGQIDEEQLFYLQSRGLPFAEAKRTIVLGFVGEII 376
Query: 466 QKLPMEFAVEAQKLIDIS 483
+P E E + I
Sbjct: 377 DMIPDEAVRERVETIVAE 394
>gi|293375295|ref|ZP_06621577.1| FeS assembly protein SufD [Turicibacter sanguinis PC909]
gi|292646051|gb|EFF64079.1| FeS assembly protein SufD [Turicibacter sanguinis PC909]
Length = 404
Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats.
Identities = 94/435 (21%), Positives = 161/435 (37%), Gaps = 38/435 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ + + A ++K P R F+ + Q+ + E+
Sbjct: 5 PTWVQQMQTEAQSVMPSLKLPKADRTIIKNWAFEAI----------EVQTPSTYNNEIPS 54
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
L V T V + D V + GVI + EA+ +H
Sbjct: 55 AVAHL------------VSTEDQNVVILCDGKIVYQNL--GIAFDGVIIANLEEALTKHE 100
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ K Y V V N AL+ A G F+++PK L+ + + F
Sbjct: 101 AIFKPYFMNVASVDTNRLTALHMAHLNSGLFIHVPKNKVVKEALNVIYLQ--ENGSLFNH 158
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
TLI+A+ S Y+E + + E V +NA++ Y+ +
Sbjct: 159 TLIVAEPNSEFKYIENYCNTV---SGNINVISETVVKENAQVDYAAMDRLTSETL----- 210
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+YN R ++ + T L G+ + E ++AI+ G Q+ +
Sbjct: 211 VYNL---RKARVEANGRLLVSLGALNDGNTVSENLVSLVGQGAHAEVKTVAIAEGLQKQN 267
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ HLA T IV+ GIS + T+ G VH+G S + ++++ A
Sbjct: 268 ITVNIEHLAPFTEGHIVNHGISKDDAQLTFNGIGKVHKGMNGSNAQQESRAMILSETARA 327
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
P + H A KI +E L+Y + RG+ AA LI+ GF+ + ++
Sbjct: 328 DANPILLIDEYDVKAGHAAGVGKIDEEQLYYLMSRGLTRRAAEVLIIYGFLMPFIDEIRN 387
Query: 471 E-FAVEAQKLIDISL 484
E E +K+I +
Sbjct: 388 ESIKAEFEKVIARKI 402
>gi|146342290|ref|YP_001207338.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
gi|146195096|emb|CAL79121.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
Length = 441
Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats.
Identities = 84/419 (20%), Positives = 154/419 (36%), Gaps = 25/419 (5%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ R+ + P R A + DL + + L + + + +
Sbjct: 35 RAAAFDRFTAVGLP---HRRVEAWRYTDLRT-----QMKEAKRLASLPDDAAKARAREAK 86
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ + + D V ++G+ P+++A+ L+ + L
Sbjct: 87 DL--------FVGAGFRKLVIVDGAFVPELSDLAELETGLTIQPMADALAADKPLLSQRL 138
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+VP D A + + P + N T F R+L+
Sbjct: 139 GAIVPDDDPALALNTALAANGVVILVAPGTALSRPIHVAFVTTNWVATSMFTRSLVNIGA 198
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + +E P E Q++ A ++LV D A I + V + + N
Sbjct: 199 GASATIVESHQGPDGSEYQVNTA-MQLVVGDEARIDHIKVVSEGGSALHIGSLLAN---- 253
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G R+ + G ++ L GE + + ++ +G Q D+ + H
Sbjct: 254 ----IGARATFNQLGFVAGGSLVRNQLFVRLAGEGTVADIRGGSLLSGTQHADTTLSIEH 309
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
A+N SR K + + ++GK++V GA + +LL+ + A + P +E
Sbjct: 310 AAENGQSRETFKAVVGDTARAVFQGKITVAPGAQKTDAKMMSRALLLSDEAEADSKPELE 369
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H TT I DE LFY + RGIP A AL++ F+ E+++ E +A
Sbjct: 370 IFADDVQCGHGTTTGAIDDELLFYLMARGIPPAEAKALLIQAFIGEIIEGAANEAVRDA 428
>gi|121997338|ref|YP_001002125.1| FeS assembly protein SufD [Halorhodospira halophila SL1]
gi|121588743|gb|ABM61323.1| Iron-regulated ABC transporter permease protein SufD
[Halorhodospira halophila SL1]
Length = 445
Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats.
Identities = 92/418 (22%), Positives = 175/418 (41%), Gaps = 27/418 (6%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+W+ E R A + P+ R+ A DL PQ+ VD L
Sbjct: 23 PEWLAERRRAAMATFDAHGFPT---RRWEAWKHIDLTPVLRSDFHP-PQTAGAVDDGLAG 78
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
++L +P + L + A + + + +G+ P+S+A+ +
Sbjct: 79 RVDQL-LPRSDGPRLVFIDGYLDASRSDYAELP-----------AGLSVQPLSQALADDV 126
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ--F 228
++++L+ ++ + ALN+A+ +G +++ +G L + G +
Sbjct: 127 AWLQQHLAAHADPANSPFIALNTALMDEGVAIHVARGAMIEAPLLIVCYTSAACAGHAVY 186
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R ++ +E S++ +E + + L V ELVA A++ + + GD+ +
Sbjct: 187 PRVIVHGEEASHLRVVEYHSGDP-EAAYLSCPVTELVADAGAQVDLTRI--SEEGDAGCQ 243
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
G + R G S + G ++G+ G+ + +S+G +
Sbjct: 244 LGAVSGTAARDARVGAHSFV------WGGDKVRVDIEATVQGDNGEGDLTGVHLSDGQRF 297
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D T + H A++T SR V KG+ G S + + G + VH GA + + +LL+
Sbjct: 298 VDHHTWVHHDAEHTRSRQVFKGVLDGRSESVFDGLIKVHPGAQKTDAEQENRNLLLSPRA 357
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
AH+ P +E H +T ++ ++ LFY RGI A +L+ FV EVL+
Sbjct: 358 FAHSNPRLEIFADDVRCTHGSTVGELDEQALFYMRARGIDPLVAKSLLTYAFVAEVLE 415
>gi|290890641|ref|ZP_06553712.1| hypothetical protein AWRIB429_1102 [Oenococcus oeni AWRIB429]
gi|290479769|gb|EFD88422.1| hypothetical protein AWRIB429_1102 [Oenococcus oeni AWRIB429]
Length = 426
Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 165/437 (37%), Gaps = 41/437 (9%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
+E +W+ E R A + P YP + +AP S + + +
Sbjct: 21 HEAEWLTEHRKKALSVSRDLDWP-----DYPRVLKTTFQAISAPLSWSLQEEKTFLTEKS 75
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
E+ + S+ EL+K GV+ M + EA +
Sbjct: 76 QIRIEQSNL------------------------SSLKIYLPRELQKLGVVVMNLFEAAEK 111
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
PDLV++YL N A++ A + G +Y+P + + ++ +
Sbjct: 112 RPDLVQQYLQK---DPHNRLLAIHQAYWNCGLLIYLPNDLHLEKPIEISLTVDNYASAIE 168
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+ L I G + ++ + E +V +L+A + + V D
Sbjct: 169 QHILFITGSGVTATVVQTTKSSTGLEKVQLNSVFDLIAGPGSRLDCFAV------DQLNH 222
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
I F R G+ ++++W E S +L G S +++++ Q+
Sbjct: 223 SKISYFN--RFSRLGVDAEVNWLLAEMNLNNLVGECSAILNGNGSKANLRVVSLADRKQK 280
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
TK++H+ ++TT I +G+ Y + +GA + + LL+
Sbjct: 281 QALMTKLIHIGQHTTGNINQRGVILQDGRLIYNAVGKIVKGAHGANSEQSSRILLLSPTA 340
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P + + H A+ ++S E L+Y + RG+ + A L+V GF ++L +L
Sbjct: 341 TGDANPILLIDENDVEAGHAASIGRVSPEQLYYLMSRGLTVDRARQLLVKGFFDDLLDRL 400
Query: 469 PME-FAVEAQKLIDISL 484
P++ VE + ++ L
Sbjct: 401 PIDNLRVELDQALERRL 417
>gi|118576536|ref|YP_876279.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
gi|118195057|gb|ABK77975.1| Fe-S cluster assembly protein [Cenarchaeum symbiosum A]
Length = 461
Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats.
Identities = 84/454 (18%), Positives = 169/454 (37%), Gaps = 37/454 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI--DFDDLYYYAAPK 93
+N + +S+ + EPDW+ E+R + + M + + + D +
Sbjct: 9 INSGHVDDLSSSRKEPDWLREFRRNSLSIYDEMP------VETSPLYNKYTDAKRMNQEQ 62
Query: 94 SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+ + + +LG ++ +G+ + D V+++ + L
Sbjct: 63 VSLSTAGGGSLPSFIEARVAELGNSPGIVQVGSGIHRINLP-----DDKLVISSIGDALL 117
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
G + A ++ + ALN+A F G ++ IP G
Sbjct: 118 NGGPARALVESA----------------DPHEDKFTALNNAAFDSGIYIEIPDGYDKEEP 161
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ + E R +I S + ++ +P Q + V+ A +
Sbjct: 162 IHILTCLPEDRLSTISRNVIKVGRDSRSTIVQELYSPPGQGQQAYLEVLTTDIGPGARLS 221
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+T+Q NF T+R D + I+W G+ ++ L G +
Sbjct: 222 ATTLQMMDQAS-------VNFSTRRSDV-AQDATINWYLGLFGTVLSRYRIDYKLMGTGA 273
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ G Q D + + H A +T R++ K I S + ++G + + GAA S
Sbjct: 274 SANDSEVVFGTGDQSFDIQSNLNHEAGSTEGRVIEKSILRERSKSLFKGMIRIMEGAAKS 333
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
++ S+L+ + + IP +E + H A+ ++I +E +FY R + E A
Sbjct: 334 NSYLSGRSILLDPDAKSDAIPGLEILTNDVKATHAASVAQIDEEQIFYLQTRCLTEAEAE 393
Query: 454 ALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
IV GF+ + +K+ + +L++ EG
Sbjct: 394 RTIVEGFLEPLSRKMSYQVRAWIAQLVESKWEGK 427
>gi|241889812|ref|ZP_04777110.1| ABC transporter ATP-binding protein [Gemella haemolysans ATCC
10379]
gi|241863434|gb|EER67818.1| ABC transporter ATP-binding protein [Gemella haemolysans ATCC
10379]
Length = 428
Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats.
Identities = 90/450 (20%), Positives = 173/450 (38%), Gaps = 36/450 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ ++ I + NEP W L R LA + T+ P + +
Sbjct: 8 LSIKTLQSIFSNTNEPTWFLNTRKLALYKSYTLPFPKLESMELERWRLFN---------- 57
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
VD LR + I E G+ + AV ++ V E+
Sbjct: 58 --------VDFSTLRLENDGNVDIVE----YGINSDDFAVVQK-NNTIVHINIPEKYADK 104
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
VI I A+ + D +K +VV ++ A++ + G F+ + L
Sbjct: 105 -VIIKDIFTAMND--DHIKDSFMSVVDYAESKVTAVHYTLLNAGLFIDVKDNAVIEEPLQ 161
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
Y I++K F I + +++E Q+++ + V E+VA + A+I YS
Sbjct: 162 -YIVISDKEQSLFNHVTIQVGNNAKFNFIENYVNNQKEDKAPFSLVSEVVAHEGAQINYS 220
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ N PG+ +G R S I+W A + + + G+ S
Sbjct: 221 SITN-QPGEKRGT-------ILRRGLTYRDSLINWNVAAMDEADVYHDNTTNILGDGSEA 272
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q+ +++++ ++ I+ G+ S+ + G + +GA S
Sbjct: 273 NLKIVTLGVKEQKTYFNSEVVNQGLSSKGDILQHGVLLDRSHIVFNGVGFIVKGATGSNA 332
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L + + A P + + H A+ +I +E L+Y RG+ + + L
Sbjct: 333 YQSSRMLTLSSEAKADANPMLLIDENDVMAGHGASLGRIDEEQLYYLQSRGLTRKESSRL 392
Query: 456 IVNGFVREVLQKLPMEFAVEA-QKLIDISL 484
+V+GF+ V+ +L ++ E LID +
Sbjct: 393 LVHGFLSPVISELTVDKIKELVTVLIDEKI 422
>gi|255027010|ref|ZP_05298996.1| aminotransferase [Listeria monocytogenes FSL J2-003]
Length = 374
Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats.
Identities = 85/390 (21%), Positives = 150/390 (38%), Gaps = 26/390 (6%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY V V ++ A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F ++ + L++AD+ S V+Y+E + + V E++A NA I + V
Sbjct: 173 FVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEEVIAEKNARITFGGV 232
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
N + +V +RG G S+I W T L G+ S +
Sbjct: 233 DNLASD-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADV 284
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
++ + G Q + T++ H K + I+S G+ + + G + GA+ S
Sbjct: 285 KTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQ 344
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+ L++ P + + H
Sbjct: 345 ESRVLMLSPEARGDANPILLIDENDVVAGH 374
>gi|268323716|emb|CBH37304.1| conserved hypothetical protein, UPF0051 family [uncultured
archaeon]
Length = 406
Score = 232 bits (592), Expect = 9e-59, Method: Composition-based stats.
Identities = 99/401 (24%), Positives = 171/401 (42%), Gaps = 22/401 (5%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
+ Y + SLD+ E + GI E++ D V
Sbjct: 25 AIEEYITGQEHPSLNSLDEFPAEYQQDLLDAGIEPTEKDR--------SGSFLQRDCSVV 76
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
+T K G+ M ++A+ E D +K+YL VPV + Y A T G F+
Sbjct: 77 FSTAKY----PGLELMSTTDALKE-HDWLKEYLWKAVPVDQDKYTAEVELEQTHGYFIRS 131
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
G + M + + I+ GQ +IIA+E S + + GC+ + LH V E
Sbjct: 132 EAGKKVTMPVQSCLFISSDKIGQKVHNIIIAEEDSELHIITGCSVSHAVNSALHLGVSEF 191
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
A+I ++ + NW G + IS L T YP
Sbjct: 192 YVKKGAKITFTMIHNWSRGMEVRPRSAV-------MIEDDGAFISNYILMTPVKSLQMYP 244
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ G + F +I ++G +IDSG++ + + + S I+S+ I+ + R V
Sbjct: 245 TAYCVGRNARATFQTIIYAHGDTKIDSGSRAVLRGEGSRSEIISRVIATDNAQVIARSDV 304
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
+ GA ++R +C L++ + +IP +++ +L HEA K+++E + Y +
Sbjct: 305 -IGEGA-NARGHIECRGLMLSDTAEVDSIPELKATRKDLDLSHEAAVGKVAEEEIQYLMA 362
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
RG+ E+ A ++I+ GF+ + LP A E +K+ D+SLE
Sbjct: 363 RGLSEDEATSVIIRGFLNVDITGLPDALAQETKKMFDMSLE 403
>gi|114776744|ref|ZP_01451787.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
gi|114552830|gb|EAU55261.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
Length = 416
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/415 (18%), Positives = 144/415 (34%), Gaps = 31/415 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ R A++ + P+ R + D+ A ++G Q E
Sbjct: 5 LQHIRDEAWQAFEARGLPT---TRDEDWKYTDISRIQA---LLGDQWWQSAATEPCDAAS 58
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ + V V+ FD+ + +K + E + E
Sbjct: 59 FVIAKLD--------AYRVVIVNGHFDAQASDLPASVSVKSLAAMIQDEPEQVSELITYR 110
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ N A NSA+ +DG+ + +P R + + T RT I
Sbjct: 111 DDAFLS------NGIVAANSALASDGACICVPDNTRLDKPIHILNVNSGGTT--HLRTGI 162
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + +E + + L AV + L+ A I++ +Q P
Sbjct: 163 HIGKQAQAEIIEHFAGN-HNNSGLTTAVTAIRLLEGARIEHYRLQMEAPKQCHLG----- 216
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + S + E G I+ L+ + + ++ Q ID T
Sbjct: 217 ---RVEITQQRDSSCTLHATEIGGMISRADVVVRLQQAGASCTLNGLFVAANRQHIDHHT 273
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++ H A + TSR + + G S+ + GK+ V GA + + +LL+ + T
Sbjct: 274 RIDHNAPHCTSRENYRAVLDGRSHGVFNGKIVVAEGAIKTDSAQNNANLLLSQHAEIDTK 333
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E N H T ++ LFY RG+ ++ A ++ F EVL K+
Sbjct: 334 PELEIYNDDVKCAHGVTVGQLDQNQLFYLKSRGLSDDEARQMLTFAFADEVLAKM 388
>gi|262382595|ref|ZP_06075732.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
gi|262295473|gb|EEY83404.1| FeS assembly protein SufD [Bacteroides sp. 2_1_33B]
Length = 450
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 153/438 (34%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A + + PS Y + D+ AP +
Sbjct: 29 MNALRADALANFERLGFPSTRSEDY---KYTDVAQAFAPDYGLN--------------IN 71
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++ IP+ ++ V ++ V + + GV + ++P++
Sbjct: 72 RVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEI 131
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-NEKGTGQFERT 231
KY P + ALN+ + DG VY+PK V + N+ T R
Sbjct: 132 ASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNIFRNDVDTMANRRV 191
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + S L C D L VVE+ A + A Y D +
Sbjct: 192 LVIMEPHSEAKLLV-CDHSIDDVKFLATQVVEIFAEEGARFDYY--------DLEESSVS 242
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + + + + + +T L GE + +++ + QQ+D+
Sbjct: 243 TTRFSSVHVRQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDT 302
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H N TS + K + + + G++ V A + + +L +
Sbjct: 303 YSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMY 362
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H TT ++ + LFY RGIP + A L+ F +V+ + +E
Sbjct: 363 SKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDHVRLE 422
Query: 472 -FAVEAQKLIDISLEGSV 488
+KL++ G +
Sbjct: 423 ALKDRLRKLVEKRFRGEL 440
>gi|329767029|ref|ZP_08258557.1| hypothetical protein HMPREF0428_00254 [Gemella haemolysans M341]
gi|328837754|gb|EGF87379.1| hypothetical protein HMPREF0428_00254 [Gemella haemolysans M341]
Length = 428
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 91/450 (20%), Positives = 178/450 (39%), Gaps = 36/450 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ ++ I + NEP W L R LA + T+ P + + +
Sbjct: 8 LSIKTLQSIFSNTNEPTWFLNTRKLALYKSYTLSFPKLESMELERWNLFN---------- 57
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
VD LR + I I + G+ AV ++ V E+
Sbjct: 58 --------VDFSTLRLENEGNIDITK----YGINNDDFAVVQK-NNTIVHINIPEKYADK 104
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
V+ I A+ + D +K +VV ++ A++ ++ G F+ + V L
Sbjct: 105 -VVIKDIFSAMND--DHIKDSFMSVVDYAESKVTAVHYSLLNAGLFINVKDNVFIEEPLQ 161
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
Y I++K F I + S +++E Q+++ + V E+VA + A+I YS
Sbjct: 162 -YIVISDKEQCLFNHVTIQVGKNSKFNFIENYVNNQKEDKAPFSLVSEVVAHEGAQINYS 220
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ N PG+ +G R S I+W A + + + G+ S
Sbjct: 221 SITN-QPGEKRGT-------ILRRGLTYRDSLINWNVAAMDEADVYHDNTTNILGDGSEA 272
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q+ +++++ ++ I+ G+ S+ + G + +GA S
Sbjct: 273 NLKIVTLGVKEQKTYFNSEVVNQGLSSKGDILQHGVLLDRSHIVFNGVGFIVKGATGSNA 332
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L + + A P + + + H A+ +I +E L+Y RG+ + + L
Sbjct: 333 YQSSRMLTLSSEAKADANPMLLIDENDVMVGHGASLGRIDEEQLYYLQSRGLTRKESSRL 392
Query: 456 IVNGFVREVLQKLPMEFAVEA-QKLIDISL 484
+V+GF+ V+ +L ++ E LID +
Sbjct: 393 LVHGFLSPVISELTVDKIKELVTVLIDEKI 422
>gi|189465086|ref|ZP_03013871.1| hypothetical protein BACINT_01430 [Bacteroides intestinalis DSM
17393]
gi|189437360|gb|EDV06345.1| hypothetical protein BACINT_01430 [Bacteroides intestinalis DSM
17393]
Length = 447
Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats.
Identities = 88/434 (20%), Positives = 157/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P+ + +Y + D+ + P + LD I
Sbjct: 30 RATAFADFERFGFPTRKQEKY---KYTDVSKFFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V ++ V + GVIF + E ++P+L+KKY
Sbjct: 73 PVNPYEVFKCDVPNMSTSLYFVVNDAFYNKALPASHLPEGVIFGSLKEMAEKYPELLKKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+A DG +Y+PK V + + R LI+
Sbjct: 133 YGKLADTSKDGVTAFNTAFTQDGVLLYVPKNVALERPIQLVNILRGDVNFLVNRRVLIVL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ L C N L V+E+ +NA + + +
Sbjct: 193 EDGAQARMLV-CDHAMDAVNFLATQVIEVFVGENAVFDLYEL--------EETHTSTVRI 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ + S + + + + LL GE + +AI++ Q +D+ T +
Sbjct: 244 SNMYVKQEANSNVLLNGMTLHNGTSRNTTEVLLAGEGAEINLCGMAIADKNQHVDNNTII 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H N TS + K + S + G V V A H+ + +L +T P
Sbjct: 304 DHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRPDAQHTSSQQTSRNLCATREARMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGIP A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDENALFYMRQRGIPAREARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|296536719|ref|ZP_06898779.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
gi|296262950|gb|EFH09515.1| FeS assembly protein SufD [Roseomonas cervicalis ATCC 49957]
Length = 429
Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/425 (18%), Positives = 147/425 (34%), Gaps = 43/425 (10%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ R + + P+ R A + DL A +D P
Sbjct: 30 WLTALRERGIEAFRALGLPT---RRVEAWKYTDLAPVAQAGFAEPLTPVDGALPLPRA-- 84
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ + V A + D+ ++ +
Sbjct: 85 -------AAPKRIVFVDGRYRADLSDSDAPVK--------------------SLAANLPA 117
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
+ L +V + D ALN+A+F DG + + G + + + ++ R L
Sbjct: 118 AEGLLGSVARLDDLPLVALNTALFEDGVLIDLGPGEDGGVVEVLHVTLADRPVAAHPRHL 177
Query: 233 IIADEGSYVSYLE---GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
+ EG+ + +E G + LH+ V E A + ++ +Q Q
Sbjct: 178 VRLAEGAKLVLIERAWGHGVGGTESRTLHSPVWEFAVGKAAHVTHARLQ-------QESL 230
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ T L G+ ++ +L G ++ + Q
Sbjct: 231 SGVHLATTFARVEAE-GTYDSFLLHAGAKLSRSEAHVVLAGPKAAAHLNGAQLLADGQHG 289
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T + H A + SR K + +G S ++GK+ VH+ A + + +LL+ +
Sbjct: 290 DCTTFLDHAAPDCPSRQTVKTVLSGKSRGVFQGKIHVHQVAQRTDGYQMNQALLLSDQAE 349
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ P +E H AT ++ + LFY RGIPEE A A+++ F+ E ++ +
Sbjct: 350 IDSKPQLEIYADDVKCSHGATVGELDEAQLFYLRARGIPEETARAMLIEAFLLEAVEGVA 409
Query: 470 MEFAV 474
E A
Sbjct: 410 DETAR 414
>gi|67920339|ref|ZP_00513859.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
gi|67857823|gb|EAM53062.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
Length = 449
Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/424 (18%), Positives = 153/424 (36%), Gaps = 37/424 (8%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + P + F DL K ++ + ++
Sbjct: 37 LRKNAVSQVQELTLPK---KKDEEWRFTDLS-----KLYELDLTIGKTEAVSKNIIDQFI 88
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+P +Q L V V+ + S + E GV +S + + Y
Sbjct: 89 LPEAKQSYL-------VFVNGEYASELSNVSALSE----GVSVGNLSHLSDAQTEKIVNY 137
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG--QFERTLII 234
L + ++ALN+A +D + ++I K V + F T RTL+I
Sbjct: 138 LGKS-EGEKDTFSALNTAGLSDAAVIWINKNVVLETPIMVLFLAVSSETASLIQPRTLVI 196
Query: 235 ADEGSYVSYLEGCTAPQRD-------ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
A+ GS + +E E +V E+ NA I ++ +Q
Sbjct: 197 AETGSSATLVEYYGTITEQSLYVKQNEPYFTNSVTEICLDGNAHINHNRIQRELGNSFHI 256
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
I + S + ++ G+ ++ + G Q+ + + Q
Sbjct: 257 GRSI--------ITQNQDSHYTCNEINLGAKVSRHTLQIIQNGTQTESNLNGLTMIGNEQ 308
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D+ T + + + + K I G S + GK+ V + A + +LL+
Sbjct: 309 VADTHTAVCLSHPHGVTHQLHKCIMDGNSRGVFNGKIFVPKPAQLTSATQLNRNLLLSTK 368
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+T P ++ + H AT S++ + LFY RG+ E A L+++ F E+L++
Sbjct: 369 ARINTKPELQITADNVKCSHGATISQLEADELFYLQSRGLNESDARHLLIDAFAAEILER 428
Query: 468 LPME 471
+P++
Sbjct: 429 IPLD 432
>gi|258510980|ref|YP_003184414.1| SufBD protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477706|gb|ACV58025.1| SufBD protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 423
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 87/431 (20%), Positives = 175/431 (40%), Gaps = 39/431 (9%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPA--IDFDDLYYYAAPKSIVGPQSLDDVDP 106
EP + E R A++++ ++ P + + + + AP
Sbjct: 18 QEPKAVTEKRDAAWKQYELLEVPRLEKTDLRRVAWEVGEFEPFEAP-------------- 63
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
IP LA V+ + V D + EE K+ GV + I EA
Sbjct: 64 ----------IPES---ALAYVRGITHSYALVVDGLVREIRLAEEAKEKGVALLAIHEAC 110
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
HP++ ++ T+VPV + + ALN A+F G F+++P+G + + +
Sbjct: 111 ETHPEIWNRHFGTIVPVEEAKWTALNMALFAGGVFLHVPRGAELEQPVEVVYVWTGRPFS 170
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R+L++ + S + Y E T +++ V+E+ A + ++ + W G
Sbjct: 171 ACSRSLVVTEPLSRLRYAE-TTFAADGGRFVNSHVLEVFAGQASRVEIAMADEWAKGG-- 227
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+FVT+R +++ W +T + L G+ S + + +G
Sbjct: 228 -----IHFVTRRAKTDND-AEVDWVVADTSDGQAVETIESALVGQGSRSFTRVMGLGHGR 281
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
++ M H+ ++T S I G +N +R + + +GA + + +++
Sbjct: 282 AHVEITASMRHVGRHTESEISMNGALRDRANVIFRSRTQIEKGAVGAGSEQHDRMIMVDG 341
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A IP + + H A+ KI ++Y + RGIP+ A+ +I+ G++R+ +
Sbjct: 342 TARADAIPMLLIDENDVERCGHAASVGKIDPLQVYYLMSRGIPQSVAVQMIIWGYLRDSV 401
Query: 466 QKLPMEFAVEA 476
+ LP + +
Sbjct: 402 EALPSDAMRDL 412
>gi|288928614|ref|ZP_06422460.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329598|gb|EFC68183.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
Length = 447
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 86/431 (19%), Positives = 165/431 (38%), Gaps = 27/431 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ Y + D+ P + Q L + I
Sbjct: 30 REAAFEDFKRLGFPTRKTEEY---KYTDISKLFEPDFGLNLQRLP------------MPI 74
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E S V D+ T ++L GV+ + + ++PD + +Y
Sbjct: 75 NPYEVFSCDVPHLSTANHFVVNDAFLQPTAPHKQLPD-GVVITSLCQYAEKNPDFIARYY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-LIIAD 236
+ + ALN+ + DG VY+P+GV+ + ++ + R LII +
Sbjct: 134 GKLAATSGDAVTALNTMLAQDGLLVYVPRGVKLGQTIQVINILHAQVDLMVNRRVLIIVE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ +L C D+ L V+E DNA + ++ + + + V+
Sbjct: 194 PQAEAKFLF-CDHTFDDQRFLATQVIEAFVGDNARLDLYCMEETHEKNVR--------VS 244
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S+++ + + +T S RGE + I++ Q +D+ T +
Sbjct: 245 SVYIEQQSSSRVNHNVITLHNGVTRNNVSLTFRGEGAECNLSGCVIADKKQHVDNNTVID 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N S + K + + + G V V + A H+ + + ++ +T P +
Sbjct: 305 HAVPNCQSHELYKYVLDDEAIGAFAGLVLVRQDAQHTDSEMRNQNICATKKAHMYTQPML 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
E H +T +++D LFY QRGI E+ A L+ F+ EV+ ++ +E E
Sbjct: 365 EIYADDVKCSHGSTVGQLNDAALFYMRQRGISEKEAKLLLEFAFINEVIDQMDLEPLRER 424
Query: 476 AQKLIDISLEG 486
L++ G
Sbjct: 425 LHHLVEKRFRG 435
>gi|298490172|ref|YP_003720349.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
gi|298232090|gb|ADI63226.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
Length = 448
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 91/437 (20%), Positives = 164/437 (37%), Gaps = 40/437 (9%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ + R A + P+ R F DL + ++ ++ T
Sbjct: 36 WLQQLRDSAVKWVRHSVIPN---TRNEEWRFTDLSL---------LKEVEFNSVDIK-TL 82
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSV-SVVTTFKEELKKSGVIFMPISEAICEHPD 171
EK + EI + V V V+ +F S +T LK + + PD
Sbjct: 83 EKFQETALDVEIFSEVSHCLVFVNGIFAPNLSAITNLPPGLKIGNLDIL---------PD 133
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--E 229
V + + + LN+A D + V++ K V + F +
Sbjct: 134 AVAQEYLAQSEGTRDVFTTLNTAGLNDVAVVWVGKNVVVQNPIYLLFISVAGESAIISQP 193
Query: 230 RTLIIADEGSYVSYLEGCTAP-----QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
R L++A+ S VS +E T DE +V E+ +NA++ ++ V
Sbjct: 194 RCLVVAESNSQVSLIEEYTNRRGAEKAEDEVYFANSVTEIWVNENAQVSHTRV------- 246
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+G + K + S+ S + G I+ L GEQ+ + +
Sbjct: 247 -VMQGEAAFHIGKTAVTQAQYSRYSCNAVTVGGKISRHNLEILQTGEQTETTLNGLTVIA 305
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q D+ + + + S+ + K I ++ + GK+ V + A + + +LL+
Sbjct: 306 EKQLADTHSVLFLNHPHGVSKHLHKCIIGDRAHGVFNGKIFVPKHAQLTDAYQLNRNLLL 365
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ T P +E + H AT S++ D+ +FY RGI A L+VN F E+
Sbjct: 366 SSKARVDTKPQLEITADNVKCSHGATVSQLEDDEIFYLQSRGIDRNNARKLLVNAFASEI 425
Query: 465 LQKLPMEFAVEAQKLID 481
+ +P+ E KL+
Sbjct: 426 INFIPVSPLRE--KLLK 440
>gi|256838941|ref|ZP_05544451.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298374488|ref|ZP_06984446.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
gi|256739860|gb|EEU53184.1| FeS assembly protein SufD [Parabacteroides sp. D13]
gi|298268856|gb|EFI10511.1| FeS assembly protein SufD [Bacteroides sp. 3_1_19]
Length = 450
Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 150/438 (34%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A + + PS Y + D+ AP +
Sbjct: 29 MNALRAEALANFERLGFPSTRSEDY---KYTDVAQAFAPDYGLN--------------IN 71
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++ IP+ ++ V ++ V + + GV + ++P++
Sbjct: 72 RVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKELPKAHLPEGVYAGGLKAFTEQYPEI 131
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERT 231
KY P + ALN+ + DG VY+PK V + T R
Sbjct: 132 ASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNIFRSDVDTMANRRV 191
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + S L C D L VVE+ A + A Y D +
Sbjct: 192 LVIMEPHSEAKLLV-CDHSIDDVKFLATQVVEIFAEEGARFDYY--------DLEESSVS 242
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + + + + + +T L GE + +++ + QQ+D+
Sbjct: 243 TTRFSSVHVRQAASANVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDT 302
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H N TS + K + + + G++ V A + + +L +
Sbjct: 303 YSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMY 362
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H TT ++ + LFY RGIP + A L+ F +V+ + +E
Sbjct: 363 SKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDHVRLE 422
Query: 472 -FAVEAQKLIDISLEGSV 488
KL++ G +
Sbjct: 423 ALKDRLHKLVEKRFRGEL 440
>gi|255012622|ref|ZP_05284748.1| putative ABC transporter protein [Bacteroides sp. 2_1_7]
Length = 450
Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 151/438 (34%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A + + PS Y + D+ AP +
Sbjct: 29 MNALRADALANFERLGFPSTRSEDY---KYTDVAQAFAPDYGLN--------------IN 71
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++ IP+ ++ V ++ V + + GV + ++P++
Sbjct: 72 RVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEI 131
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-NEKGTGQFERT 231
KY P + ALN+ + DG VY+PK V + N+ T R
Sbjct: 132 ASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNIFRNDVDTMANRRV 191
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + S L C L VVE+ A + A Y D +
Sbjct: 192 LVIMEPHSEAKLLV-CDHSIDGVKFLATQVVEIFAEEGARFDYY--------DLEESSVS 242
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + + + + + +T L GE + +++ + QQ+D+
Sbjct: 243 TTRFSSVHVRQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDT 302
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H N TS + K + + + G++ V A + + +L +
Sbjct: 303 YSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMY 362
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H TT ++ + LFY RGIP + A L+ F +V+ + +E
Sbjct: 363 SKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDHVRLE 422
Query: 472 -FAVEAQKLIDISLEGSV 488
KL++ G +
Sbjct: 423 ALKDRLHKLVEKRFRGEL 440
>gi|126660041|ref|ZP_01731162.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
gi|126618638|gb|EAZ89386.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
Length = 449
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 76/423 (17%), Positives = 151/423 (35%), Gaps = 37/423 (8%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + PS + F DL + V ++ +
Sbjct: 37 LRKNAVSQVQELTLPS---KKDEEWRFTDLSELYQLNFQTAKT--ETVTQTIIDNF---I 88
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+P +Q L V + + +S + +A + Y
Sbjct: 89 LPEAQQSYLVFVNGEYSSELSNVSGLSEDIYIGN--------LGHLPDA---KNSKIANY 137
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF--RINEKGTGQFERTLII 234
L + + ALN+A F D + ++ K + F N+ RTL+I
Sbjct: 138 LGK-QEGEKDAFTALNTAGFKDAAVIWANKNSVIETPIQLLFLTVGNDTPILIQPRTLVI 196
Query: 235 ADEGSYVSYLEGCTAPQRDEN-------QLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
A+ GS +S++E + +V E+ +NA+I +S +Q
Sbjct: 197 AETGSSLSFVEYYATVTESCSDDEKNQPYFTNSVTEIWLENNAQINHSRIQRELGDSFH- 255
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ K + S + ++ G+ ++ +G Q+ + + + Q
Sbjct: 256 -------IGKSAISQNQDSHYTCNEVNLGAKVSRHTLQIWQKGTQTESHLNGLTMIDNEQ 308
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D+ T + + + + K I G + GK+ V + A + +LL+
Sbjct: 309 LADTHTAVCLNHPHGVTHQLHKCIIDGNGRGVFNGKIFVPKPAQLTNATQLNRNLLLSPK 368
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+T P ++ + H AT S++ + LFY RG+ E A L+++ F E+L++
Sbjct: 369 ARINTKPELQITADNVKCSHGATISQLEADELFYLQSRGLNEIDARHLLIDAFAAEILER 428
Query: 468 LPM 470
+P+
Sbjct: 429 IPL 431
>gi|315425112|dbj|BAJ46784.1| Fe-S cluster assembly protein SufD [Candidatus Caldiarchaeum
subterraneum]
Length = 494
Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats.
Identities = 83/442 (18%), Positives = 179/442 (40%), Gaps = 28/442 (6%)
Query: 48 KNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPE 107
+ EP+W+ R + + ++ P + + Y P ++ E
Sbjct: 53 RGEPEWLSRLRARSLEMYFSLP-PEVSEL------------YVRHYE--APSLPEESLIE 97
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ ++ IP + LA A+ S V + L+ + +P++EA+
Sbjct: 98 MTDPGDQRQIP-ADFRHLAEDTEHPTAIFVG--SKLVHISIPRNLEAQQIELLPLAEALK 154
Query: 168 EHPDLVKKYLSTVVPVGD-NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+H +++ V + Y L A+ G F+ IPK ++ + + +++
Sbjct: 155 KHEPFIRELYQRVTNSSYADKYTYLVHALTNAGVFLRIPKNLQLSRPIRVVYVLDKPREA 214
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
F + + + + G+ S +E + + L +LD++ +K+ST+QN G
Sbjct: 215 VFSKVVAVTEPGAVASIIEEVHGLPGADESVFGHHTHLYSLDDSSLKHSTLQNLSHGQ-- 272
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+V+ R G S G ++ + G+ S I +
Sbjct: 273 ------TYVSNRVADVGRGSSAMVVGAVIGGQVSKVRVDSSMHGDGSSVNDLEIVFGDAE 326
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q+ID + H+ T R+++KG+ + + ++G +++ + A ++ + ++++
Sbjct: 327 QRIDVTANLHHIGFGTQGRVLAKGVVKDKAKSIFKGVITIEKQAKNTSAYLAEHAMIMSP 386
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
A+ IP +E H A+ S+I E L+Y + RGIPE+ A ++ GF V+
Sbjct: 387 EARAYAIPSLEIMTDEVKATHSASVSQIDPEQLYYLMARGIPEQEARKMLALGFFEPVVS 446
Query: 467 KLPM-EFAVEAQKLIDISLEGS 487
+ + E + L++ G+
Sbjct: 447 MIDLNEVRWGLRTLLESKWGGA 468
>gi|254439728|ref|ZP_05053222.1| FeS assembly protein SufD [Octadecabacter antarcticus 307]
gi|198255174|gb|EDY79488.1| FeS assembly protein SufD [Octadecabacter antarcticus 307]
Length = 433
Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats.
Identities = 86/422 (20%), Positives = 149/422 (35%), Gaps = 44/422 (10%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W+ E R A R M P R F + P + D +
Sbjct: 29 AWITEARTAAVNRVKAMGLP---HGRDEYWKFTKPDTFVQPDAPKAALFHSDEGA-IWAD 84
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
++L I V VD VFD+ + ++L G+ +S+A +
Sbjct: 85 VDRLKI---------------VFVDGVFDADA-----SDDLSGEGLAIERLSDAADKDIH 124
Query: 172 LVKKYLSTV----VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
K + D AALN+A TDG +++ + ++ + N + +
Sbjct: 125 WAKDLYGVLEIGGQDAVDRPLAALNTAFATDGVLIHVTG--KLSKPVNLIYLHNSESSDV 182
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
I + G+ ++ LE R V+E+ D A + VQ G
Sbjct: 183 ILHHCIKIENGAEMTLLETGPGAARL-----NKVMEVEIADKATFHHVRVQ----GRDHD 233
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-F 346
+ + T+ G S L +T L G+ + + +G
Sbjct: 234 RRAVTGIFTR----LGHESTFKSFTLTMNGVLTRNECVIELTGDNAMAHVAGACVGDGKD 289
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
D + H + N SR V K + + ++GK+ V GA + + +LL+ +
Sbjct: 290 FHQDDTVFITHDSLNCESRQVFKKVLRNGATGVFQGKILVKNGAQKTDGYQISQALLLDD 349
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ P +E H +TT I ++ LFY RG+P+ A L+V F+ E L
Sbjct: 350 DSQFLAKPELEIYADDVACSHGSTTGAIDEDSLFYLQSRGVPKAEATDLLVLAFLAEALD 409
Query: 467 KL 468
++
Sbjct: 410 EI 411
>gi|212692752|ref|ZP_03300880.1| hypothetical protein BACDOR_02250 [Bacteroides dorei DSM 17855]
gi|212664688|gb|EEB25260.1| hypothetical protein BACDOR_02250 [Bacteroides dorei DSM 17855]
Length = 447
Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 158/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ P + LD I
Sbjct: 30 RAQAFADFEKLGFPTRKQEKY---KYTDVSKLFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GV+ + E ++P LVK+Y
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYRKVLPKAQLPEGVLLGSLKELSEQYPALVKQY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+ DG +Y+PKGV + + R L++
Sbjct: 133 YGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVNFMVNRRVLVVL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+E + L C + N L V+E+ A +NA ++ + + N
Sbjct: 193 EESAQARLLI-CDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTVRFSNLYVN-- 249
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S + + + T L G + + I++ +Q+D+ T +
Sbjct: 250 ------QEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + S + K + + + GKV V GA H+ + +L + +T P
Sbjct: 304 DHKVADCASNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI + A L++ FV EV+ + M+
Sbjct: 364 LEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRMDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|150010118|ref|YP_001304861.1| putative ABC transporter protein [Parabacteroides distasonis ATCC
8503]
gi|149938542|gb|ABR45239.1| putative ABC transporter protein [Parabacteroides distasonis ATCC
8503]
Length = 450
Score = 229 bits (585), Expect = 6e-58, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 152/438 (34%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A + + PS Y + D+ AP +
Sbjct: 29 MNALRADALANFERLGFPSTRSEDY---KYTDVAQAFAPDYGLN--------------IN 71
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++ IP+ ++ V ++ V + + GV + ++P++
Sbjct: 72 RVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEI 131
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-NEKGTGQFERT 231
KY P + ALN+ + DG VY+PK V + N+ T R
Sbjct: 132 ASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNIFRNDVDTMANRRV 191
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + S L C D L VVE+ A + A Y D +
Sbjct: 192 LVIMEPHSEAKLLV-CDHSIDDVKFLATQVVEIFAEEGARFDYY--------DLEESSES 242
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + + + + + +T L GE + +++ + QQ+D+
Sbjct: 243 TTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDT 302
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H N TS + K + + + G++ V A + + +L +
Sbjct: 303 YSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMY 362
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H TT ++ + LFY RGIP + A L+ F +V+ + +E
Sbjct: 363 SKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDHVRLE 422
Query: 472 -FAVEAQKLIDISLEGSV 488
KL++ G +
Sbjct: 423 ALKDRLHKLVEKRFRGEL 440
>gi|315426876|dbj|BAJ48496.1| Fe-S cluster assembly protein SufB [Candidatus Caldiarchaeum
subterraneum]
Length = 471
Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats.
Identities = 83/442 (18%), Positives = 179/442 (40%), Gaps = 28/442 (6%)
Query: 48 KNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPE 107
+ EP+W+ R + + ++ P + + Y P ++ E
Sbjct: 30 RGEPEWLSRLRARSLEMYFSLP-PEVSEL------------YVRHYE--APSLPEESLIE 74
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ ++ IP + LA A+ S V + L+ + +P++EA+
Sbjct: 75 MTDPGDQRQIP-ADFRHLAEDTEHPTAIFVG--SKLVHISIPRNLEAQQIELLPLAEALK 131
Query: 168 EHPDLVKKYLSTVVPVGD-NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+H +++ V + Y L A+ G F+ IPK ++ + + +++
Sbjct: 132 KHEPFIRELYQRVTNSSYADKYTYLVHALTNAGVFLRIPKNLQLSRPIRVVYVLDKPREA 191
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
F + + + + G+ S +E + + L +LD++ +K+ST+QN G
Sbjct: 192 VFSKVVAVTEPGAVASIIEEVHGLPGADESVFGHHTHLYSLDDSSLKHSTLQNLSHGQ-- 249
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+V+ R G S G ++ + G+ S I +
Sbjct: 250 ------TYVSNRVADVGRGSSAMVVGAVIGGQVSKVRVDSSMHGDGSSVNDLEIVFGDAE 303
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q+ID + H+ T R+++KG+ + + ++G +++ + A ++ + ++++
Sbjct: 304 QRIDVTANLHHIGFGTQGRVLAKGVVKDKAKSIFKGVITIEKQAKNTSAYLAEHAMIMSP 363
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
A+ IP +E H A+ S+I E L+Y + RGIPE+ A ++ GF V+
Sbjct: 364 EARAYAIPSLEIMTDEVKATHSASVSQIDPEQLYYLMARGIPEQEARKMLALGFFEPVVS 423
Query: 467 KLPM-EFAVEAQKLIDISLEGS 487
+ + E + L++ G+
Sbjct: 424 MIDLNEVRWGLRTLLESKWGGA 445
>gi|197121305|ref|YP_002133256.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
gi|196171154|gb|ACG72127.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
Length = 439
Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats.
Identities = 90/439 (20%), Positives = 163/439 (37%), Gaps = 30/439 (6%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EP W+ + R A + P+ F L + P D P
Sbjct: 17 GEPAWLADARAGALAAFRAAGLPTPRHED---WRFTSLAALSTLSLAPAPAPEDGEGPA- 72
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +LAG + A + +G + +++A+
Sbjct: 73 -------------RALLAGRPAPEGARLVFENGRFRRELSSGAPLPAGAVLGSLADALRH 119
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TG 226
P+ V+ +L + V + ALN A+ DG+F+ +P G R + F G
Sbjct: 120 APEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPAGARVEAPIELVFATGAAGRAVA 179
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R L++A EG+ + E L +V ELV + AEI++ +Q+
Sbjct: 180 VHPRVLVVAGEGARATLAEVHLGTGDT--YLANSVTELVLGEGAEIEHLRLQDEGARAFH 237
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V+ + RS+++ L G + L GE + + +++G
Sbjct: 238 --------VSALFAEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGA 289
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ D+ T + H T+ KGI G + + G++ V GA + +LL+ +
Sbjct: 290 RTTDAFTWVEHAVPRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSD 349
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ T P +E H T ++ + LFY RG+ E A +L++ F E++
Sbjct: 350 DAIVDTKPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVD 409
Query: 467 KL-PMEFAVEAQKLIDISL 484
+ P A++L+ L
Sbjct: 410 LVRPAGLHARARELVAARL 428
>gi|160872499|ref|ZP_02062631.1| FeS assembly protein SufD [Rickettsiella grylli]
gi|159121298|gb|EDP46636.1| FeS assembly protein SufD [Rickettsiella grylli]
Length = 434
Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats.
Identities = 89/421 (21%), Positives = 163/421 (38%), Gaps = 37/421 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ R A + TM PS + + F+ L + P +V S D E
Sbjct: 34 LTRLRRTALDAFTTMGFPSKKQADWKYTSFNTL--HQTPYFLVASSSPPDPVLE-----A 86
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+G+ + S V A D ++ + HP+LV
Sbjct: 87 TIGVRLVFVNGFFAPHLSTVIDLAQNDRITHLIQMH-----------------HHHPELV 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE--RT 231
K ++++ V N + LN+A +G+F+Y+P + F ++ +F R
Sbjct: 130 KAHVNSNA-VEKNSFTQLNTAFLREGAFIYLPANTCLNTPIDVLFINTDETPNRFIPLRN 188
Query: 232 LIIADEGSYVSYLEGC--TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
+IIA+E S+ + +E +++ +V E N+ I++ N
Sbjct: 189 IIIAEENSHATIVEKYIDMTSKKNTPYFTNSVTECYLSANSHIEHYQYINESQQAQH--- 245
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
V + S+ S SA+ + L Q+ + + ++ QQI
Sbjct: 246 -----VGSLSVSQQENSQFSAYSFALNSALIRRDIIVKLLAPQAQCQLKGLYLAFRHQQI 300
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T + H++ T S KGI + T+ GK+ V A S+ +LL+ +
Sbjct: 301 DYCTVIDHVSPKTQSDEFYKGIIGDNARATFNGKLIVREDAIQSKAHQLNKNLLLSAHSE 360
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
++ P +E + H A+ ++ ++ LFY RG+ A L+VN F ++LQ +P
Sbjct: 361 MNSKPQLELFTDDIHCTHGASIGQLDNDALFYLQSRGLTINQATDLLVNAFAHDILQHMP 420
Query: 470 M 470
+
Sbjct: 421 L 421
>gi|332885278|gb|EGK05529.1| hypothetical protein HMPREF9456_02730 [Dysgonomonas mossii DSM
22836]
Length = 446
Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats.
Identities = 82/427 (19%), Positives = 159/427 (37%), Gaps = 28/427 (6%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + P+ Y +D V + L D + R
Sbjct: 28 LRDKALNIFKDQGFPTKKMEDYLYLD-------------VAAEFLPDFALNINRLPFTGN 74
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ + + + T+ V + + + SGV E PD+ KY
Sbjct: 75 PYVAFRCEIPNLTTNLYFV---LNDIFHEEHKPKINYPSGVFVGSFKHFAEEKPDVFSKY 131
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + +N A N+ DG +Y+PKGV + + + R LIIA
Sbjct: 132 YGQIADMDNNGIVAFNTMFAQDGFVIYVPKGVVVEEPIQLINILKSEFNILVNRRILIIA 191
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++ + V L C + L V E+ A NA I Y ++ +
Sbjct: 192 EDDAQVKLLI-CDHTVDESQFLATQVTEIFAGRNALIDYYDLEENSDK--------VTRL 242
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
T + S + + + ++ + L G+ + + I++ Q +D+ +
Sbjct: 243 TNTFVHQLEASNVLINNMTFNTGVSRNNYNVKLSGQHAEAYVCGMVIADKHQYVDNFAFL 302
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
HL + TS + K + + + G++ V + A + + ++L I N ++ P
Sbjct: 303 DHLVPHCTSTQLFKYVLQDEATGAFCGRIRVEKDAQKTLAYQSNNNLCISPNAHMYSKPQ 362
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H TT ++ +E LFY RG+ +E+A +++ F VL+ + ++ E
Sbjct: 363 LEIYADDVKCSHGLTTGQLDEEALFYLRSRGLSKESARLMLMQAFAAGVLEHVRIDRLKE 422
Query: 476 AQKLIDI 482
+L+D+
Sbjct: 423 --RLLDL 427
>gi|150003926|ref|YP_001298670.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|294775082|ref|ZP_06740611.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|319639843|ref|ZP_07994572.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
gi|149932350|gb|ABR39048.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides vulgatus ATCC 8482]
gi|294451126|gb|EFG19597.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|317388507|gb|EFV69357.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
Length = 447
Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 160/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ P + LD I
Sbjct: 30 RAQAFADFEKLGFPTRKQEKY---KYTDVSKLFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GV+ + E ++P LVK+Y
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKELSEQYPALVKQY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+ DG +Y+PKGV + + R L++
Sbjct: 133 YGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVNFMVNRRVLVVL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C + N L V+E+ A +NA ++ + + N
Sbjct: 193 EEGAQARLLI-CDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTVRFSNLYVN-- 249
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S + + + T L G + + I++ +Q+D+ T +
Sbjct: 250 ------QEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + TS + K + + + GKV V GA H+ + +L + +T P
Sbjct: 304 DHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI + A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|315428023|dbj|BAJ49611.1| Fe-S cluster assembly protein SufB [Candidatus Caldiarchaeum
subterraneum]
Length = 471
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 83/442 (18%), Positives = 179/442 (40%), Gaps = 28/442 (6%)
Query: 48 KNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPE 107
+ EP+W+ R + + ++ P + + Y P ++ E
Sbjct: 30 RGEPEWLSRLRARSLEMYFSLP-PEVSEL------------YVRHYE--APSLPEESLIE 74
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ ++ IP + LA A+ S V + L+ + +P++EA+
Sbjct: 75 MTDPGDQRQIP-ADFRHLAEDTEHPTAIFVG--SKLVHISIPRNLEAQQIELLPLAEALK 131
Query: 168 EHPDLVKKYLSTVVPVGD-NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+H +++ V + Y L A+ G F+ IPK ++ + + +++
Sbjct: 132 KHEPFIRELYQRVTNSSYADKYTYLVHALTNAGVFLRIPKNLQLARPIRVVYVLDKPREA 191
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
F + + + + G+ S +E + + L +LD++ +K+ST+QN G
Sbjct: 192 VFSKVVAVTEPGAVASIIEEVHGLPGADESVFGHHTHLYSLDDSSLKHSTLQNLSHGQ-- 249
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+V+ R G S G ++ + G+ S I +
Sbjct: 250 ------TYVSNRVADVGRGSSAMVVGAVIGGQVSKVRVDSSMHGDGSSVNDLEIVFGDAE 303
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q+ID + H+ T R+++KG+ + + ++G +++ + A ++ + ++++
Sbjct: 304 QRIDVTANLHHIGFGTQGRVLAKGVVKDKAKSIFKGVITIEKQAKNTSAYLAEHAMIMSP 363
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
A+ IP +E H A+ S+I E L+Y + RGIPE+ A ++ GF V+
Sbjct: 364 EARAYAIPSLEIMTDEVKATHSASVSQIDPEQLYYLMARGIPEQEARKMLALGFFEPVVS 423
Query: 467 KLPM-EFAVEAQKLIDISLEGS 487
+ + E + L++ G+
Sbjct: 424 MIDLNEVRWGLRTLLESKWGGA 445
>gi|301308168|ref|ZP_07214122.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
gi|300833638|gb|EFK64254.1| FeS assembly protein SufD [Bacteroides sp. 20_3]
Length = 450
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 147/437 (33%), Gaps = 27/437 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A + + PS Y + D+ AP + + + +
Sbjct: 29 MNALRADALANFERLGFPSTRSEDY---KYTDVAQAFAPDYGLNINRV-AIPVNPYDVFR 84
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ V D +D T E + G+ ++P++
Sbjct: 85 CDVPNLS-------TSLYFVVNDTFYDKELPKTHLPEGVYAGGLKAFT-----EQYPEIA 132
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTL 232
KY P + ALN+ + DG VY+PK V + T R L
Sbjct: 133 SKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNIFRSDVDTMANRRVL 192
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+I + S L C D L VVE+ A + A Y D +
Sbjct: 193 VIMEPHSEAKLLV-CDHSIDDVKFLATQVVEIFAEEGARFDYY--------DLEESSEST 243
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ + + + + + +T L GE + +++ + QQ+D+
Sbjct: 244 TRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTY 303
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ + H N TS + K + + + G++ V A + + +L ++
Sbjct: 304 SHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMYS 363
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME- 471
P +E H TT ++ + LFY RGIP + A L+ F +V+ + +E
Sbjct: 364 KPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDHVRLEA 423
Query: 472 FAVEAQKLIDISLEGSV 488
KL++ G +
Sbjct: 424 LKDRLHKLVEKRFRGEL 440
>gi|237709448|ref|ZP_04539929.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754647|ref|ZP_06089699.1| FeS assembly protein SufD [Bacteroides sp. 3_1_33FAA]
gi|229456504|gb|EEO62225.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234761|gb|EEZ20329.1| FeS assembly protein SufD [Bacteroides sp. 3_1_33FAA]
Length = 447
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 159/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ P + LD I
Sbjct: 30 RAQAFADFEKLGFPTRKQEKY---KYTDVSKLFEPDYGLNLNRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GV+ + E ++P LVK+Y
Sbjct: 73 PVNPYEVFKCDVPNMSTALYFVVNDAFYRKVLPKAQLPEGVLLGSLKELSEQYPALVKQY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+ DG +Y+PKGV + + R L++
Sbjct: 133 YGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVNFMVNRRVLVVL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+E + L C + N L V+E+ A +NA ++ + + N
Sbjct: 193 EESAQARLLI-CDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTVRFSNLYVN-- 249
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S + + + T L G + + I++ +Q+D+ T +
Sbjct: 250 ------QEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + TS + K + + + GKV V GA H+ + +L + +T P
Sbjct: 304 DHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI + A L++ FV EV+ + ++
Sbjct: 364 LEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHLLVEKRFRGEL 437
>gi|254880833|ref|ZP_05253543.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
gi|254833626|gb|EET13935.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
Length = 449
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 160/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ P + LD I
Sbjct: 32 RAQAFADFEKLGFPTRKQEKY---KYTDVSKLFEPDYGLNLNRLD--------------I 74
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GV+ + E ++P LVK+Y
Sbjct: 75 PVNPYEVFKCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKELSEQYPALVKQY 134
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+ DG +Y+PKGV + + R L++
Sbjct: 135 YGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVNFMVNRRVLVVL 194
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ L C + N L V+E+ A +NA ++ + + N
Sbjct: 195 EEGAQARLLI-CDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTSTVRFSNLYVN-- 251
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S + + + T L G + + I++ +Q+D+ T +
Sbjct: 252 ------QEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFI 305
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + TS + K + + + GKV V GA H+ + +L + +T P
Sbjct: 306 DHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQ 365
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI + A L++ FV EV+ + ++
Sbjct: 366 LEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDALKD 425
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 426 RLHLLVEKRFRGEL 439
>gi|220908817|ref|YP_002484128.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
gi|219865428|gb|ACL45767.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
Length = 451
Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats.
Identities = 83/422 (19%), Positives = 152/422 (36%), Gaps = 36/422 (8%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
++ + R A + P+ R F DL LRT
Sbjct: 46 AFVQDLRDRATALAQELTIPT---TREEEWRFTDLSP--------------------LRT 82
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA-ICEHP 170
+ I + A + V ++ V V F EL I + +
Sbjct: 83 VQFTAIAPEQSPARAEQISGFVLPESSLRLVFVNGRFAPELSDLQAIPSGLKVGTLAGQT 142
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ--F 228
+ YL+ + + LN+A F+D + + + + + L F T
Sbjct: 143 AQLNPYLAQQAGSEE-IFTVLNTASFSDAAVIQVDRNQQIEAPLHLLFIAVPTSTPTIAH 201
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R L++A+ S ++ +E QL AV E+ NAE+ + +Q
Sbjct: 202 PRCLVMAETSSRLTLVEEY-VTVGTGVQLTNAVTEIWLGSNAEVNHIRIQAQALDGFH-- 258
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ K + S+ + + G I+ GEQ+ + ++ G Q
Sbjct: 259 ------IGKTAVSQARDSRYTGQAISLGGQISRHNLEVHSAGEQTQTTLNGLTLATGEQL 312
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+ + + TS+ + K I + + + GKV V + A + +LL+
Sbjct: 313 SDTHSTIAFTKPYCTSQQLHKCIVSDRARAVFNGKVFVPKAAQLTDAAQLNRNLLLSPKA 372
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
T P +E + H AT S++ ++ +FY RG+ + A L+V GF E+L+ +
Sbjct: 373 RIDTKPQLEIVADNVKCSHGATVSQLEEDEIFYLRSRGLNYQDASNLLVKGFAVEMLELI 432
Query: 469 PM 470
P+
Sbjct: 433 PV 434
>gi|88706201|ref|ZP_01103908.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
gi|88699595|gb|EAQ96707.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
Length = 435
Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats.
Identities = 71/425 (16%), Positives = 148/425 (34%), Gaps = 35/425 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ + W P+ R + L+ + +
Sbjct: 17 PHWLQSVQARGLSLWQEADLPT---RRTENWKYT---------------GLNVLRDDYHL 58
Query: 111 TYEKLGIPIREQEILAGVQTSK-VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
L + + AG ++ V VD ++ S GV +A E
Sbjct: 59 ADGSLTLDALPDKWAAGCGGTRLVFVDGIYQS-----ALSTAASADGVRVCRFEDADEEQ 113
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC-PMELSTYFRIN--EKGTG 226
+ +L+ + V D+ +AALN+A DG V I + + ++ + T
Sbjct: 114 SAKIAGHLNGALNVEDHLFAALNTATLRDGVLVEIAANTAADEAPIECLWLVSAVDAPTA 173
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+R L++A+ G+ + +E + ++ + EL+ NA + + +
Sbjct: 174 ANQRLLVLAESGASATVVEHFASLDDAKDSFCNGLTELMLGPNARLSHYRIHEESGSAVH 233
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
G + + L GS + G + + + G
Sbjct: 234 IGG--------VHARLDRDAHLESFHLALGSVLKRFDLVINHAGPGAYASLNGVYLPRGD 285
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ ID + + H + +S + +GI A + + G++ +H A +R +LL
Sbjct: 286 EHIDYHSTIEHAVPHCSSDEIFRGIIADKATAVFNGRIHIHPDAQKTRAELSNRNLLTSP 345
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
++ P +E H T +++ + + Y RG+ + A ++ GF+ E++
Sbjct: 346 EATVNSKPELEIYADDVQCAHGTTVAQLDETAMHYLRTRGVSQAEAEVMLSFGFINELID 405
Query: 467 KLPME 471
L +E
Sbjct: 406 GLGLE 410
>gi|75675854|ref|YP_318275.1| FeS assembly protein SufD [Nitrobacter winogradskyi Nb-255]
gi|74420724|gb|ABA04923.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
winogradskyi Nb-255]
Length = 440
Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats.
Identities = 77/411 (18%), Positives = 147/411 (35%), Gaps = 26/411 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A+ + P R + DL + +
Sbjct: 33 EARQAAFDDFARRGLP---YRRIEEWKYTDLRTLLREIAPLAAAPDQAALARAGEAVTAY 89
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
G AG V VD VF ++ ++GV + E + + +
Sbjct: 90 G---------AGDAYKLVLVDGVFAP-----KLSDQTPENGVEVRALREVLENNEVAARA 135
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
L T D +LN+A+ TDG + + + + L + T F R+ +
Sbjct: 136 DLLTTTAASD-TMISLNTAMATDGIVIDVAENAKLTRPLHIVHIATQSSTAAFTRSSLRL 194
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G+ + +E A + V L D+A +++ + + I
Sbjct: 195 ANGAQATLVESFVAAEGAAAYQAHDSVVLWVGDDAVLQHVRLVEDARDAANISTAIVT-- 252
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G ++ + L +G+A++ GE S + + + NG Q D+ +
Sbjct: 253 ------IGAKATFNSLNLTSGAAVSRYQGFIKFSGEGSHADVNGVNLLNGRQHGDTTLVL 306
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + +S V + + +++ ++GK+ V A + +LL+ ++ A P
Sbjct: 307 DHAVPHCSSNEVFRAVLDDQAHSVFQGKIIVRPDAQKTDGRMMTRALLLSDSAEADNKPE 366
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+E + H AT + + LFY RG+ E+ A AL++ FV E ++
Sbjct: 367 LEIFADDVSCGHGATIGALDESLLFYLRARGLSEKEAQALLIQAFVGEAIE 417
>gi|257075583|ref|ZP_05569944.1| hypothetical protein Faci_00895 [Ferroplasma acidarmanus fer1]
Length = 835
Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats.
Identities = 107/420 (25%), Positives = 193/420 (45%), Gaps = 27/420 (6%)
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
+ + Y+ + + + + + +P +Q++L D
Sbjct: 431 KYYTVSTYSKTLIDFCLNNAGKYADKKAFSEKIMKLPPEKQKLLIDYYLKG-------DG 483
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
+ K ++ ++G ++ + E + S ++ + + +
Sbjct: 484 NVYIKKGKSKMIRAGTASKILALQLQEMLSRNNTFASIMIRKASDDVILGRNIKRKEQYI 543
Query: 202 VYIPKGVR---CPMELSTYFRINEKGTGQFERTLI----IADEGSYVSY---LEGCTAPQ 251
V + ++ + + Y+ +K + ++ + + SY+ + CTAP+
Sbjct: 544 VEYTENIKFSRVRHKDNYYYVPIKKMEAEVYDDIVYNMEVETDDSYLVKGFAVHNCTAPK 603
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ + LH A+VE+ A N+++KY++VQNW +YN KR + + W
Sbjct: 604 YNTSSLHTAIVEIYARKNSDVKYTSVQNW-------SDSVYNLPVKRAWV-DENAHMDWV 655
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
E GS +T YPS LRG + I ++ D+G K LHLA +TTSRIVSK I
Sbjct: 656 TGELGSKVTMIYPSSYLRGRGASTSNLQITLATKDTFKDAGGKALHLAPDTTSRIVSKSI 715
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S YRG V ++ GA +++ QCD+LLI ++ +T PY E + HEAT
Sbjct: 716 SLDNGLTAYRGLVRMNEGAKRAKSHVQCDALLINSDSKNYTYPYDEIYEPTAEFSHEATV 775
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE--GSVG 489
KI + L Y RG+ E+ A ++IV GF+ ++++++PMEFAVE +L+ + + G+VG
Sbjct: 776 GKIGTDELTYLRSRGLSEDEASSMIVLGFMDDIMKEIPMEFAVEMNRLVKLEMSKMGAVG 835
Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats.
Identities = 98/245 (40%), Positives = 139/245 (56%), Gaps = 12/245 (4%)
Query: 6 ETVDKVRK--IDVDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
E ++K+ + + + F I V GLN + IS K+EPDWM RL A
Sbjct: 8 EEIEKLTESLKHNKKSDFEFHDTINPVYSTGTGLNRKTVEEISDIKHEPDWMRRSRLKAL 67
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+L+ P+W I+FD+L YY+ P ++ DDV ++ T+ KLGIP EQ
Sbjct: 68 DIFLSKPMPTWGP-DLSGINFDELTYYSKPGETKA-KNWDDVPDKIKETFNKLGIPQMEQ 125
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
+ LAG A +DS V + ++E + GVIF + A+ EHPDLVK Y +P
Sbjct: 126 KYLAGSV-------AQYDSEGVYGSLRKEWEDKGVIFTDLDTAVQEHPDLVKDYYCRAIP 178
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
DN +AALN AV++ GSF+Y+PK V M L TYFR+N + +GQFE T+++ADEG+ V
Sbjct: 179 PSDNKFAALNGAVWSGGSFLYVPKNVTIDMPLQTYFRMNGEQSGQFEHTIVVADEGAKVH 238
Query: 243 YLEGC 247
Y+EGC
Sbjct: 239 YIEGC 243
>gi|237724952|ref|ZP_04555433.1| ABC transporter permease [Bacteroides sp. D4]
gi|229436690|gb|EEO46767.1| ABC transporter permease [Bacteroides dorei 5_1_36/D4]
Length = 449
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 159/434 (36%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P+ + +Y + D+ P + LD I
Sbjct: 32 RAQAFADFEKLGFPTRKQEKY---KYTDVSKLFEPDYGLNLNRLD--------------I 74
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E+ V A+ V + + GV+ + E ++P LVK+Y
Sbjct: 75 PVNPYEVFKCDVPNMSTALYFVVNDAFYRKVLPKAQLPEGVLLGSLKELSEQYPALVKQY 134
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
+ + A N+ DG +Y+PKGV + + R L++
Sbjct: 135 YGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADVNFMVNRRVLVVL 194
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+E + L C + N L V+E+ A +NA ++ + + N
Sbjct: 195 EESAQARLLI-CDHAMDNVNFLSTQVIEVFAKENAIFDLYELEETHTSTVRFSNLYVN-- 251
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S + + + T L G + + I++ +Q+D+ T +
Sbjct: 252 ------QEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFI 305
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + TS + K + + + GKV V GA H+ + +L + +T P
Sbjct: 306 DHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQ 365
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H AT ++ + LFY QRGI + A L++ FV EV+ + ++
Sbjct: 366 LEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDALKD 425
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 426 RLHLLVEKRFRGEL 439
>gi|83952075|ref|ZP_00960807.1| FeS assembly protein SufD [Roseovarius nubinhibens ISM]
gi|83837081|gb|EAP76378.1| FeS assembly protein SufD [Roseovarius nubinhibens ISM]
Length = 434
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 89/444 (20%), Positives = 149/444 (33%), Gaps = 44/444 (9%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W+ + R A R P R F D +
Sbjct: 30 PAWLRDIREAAVARVRDRGLPD---RRDEYWKFTRPETLVQ-AEAPKAAVFAGGDQSVFA 85
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+ L I V VD VFD+ + +EL G+ ++E
Sbjct: 86 NVDALKI---------------VFVDGVFDAEA-----SDELALDGLRIERLAELNGTDI 125
Query: 171 DLVKKYLSTVVP----VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
K + D AALN+ +DG +++ R + + +
Sbjct: 126 HWAKDLYGVLEERGQWPVDRPLAALNTGFASDGVVIHVTG--RVSKPVHIVYEHQSDSSD 183
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
L+ D G+ V+ LE R +V+E+ D A + VQ D +
Sbjct: 184 AMLHHLVKLDAGADVTLLETGPGAARF-----NSVMEVDVADKAGFHHVRVQ---GRDHE 235
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ + F G S + +T L G+ + A+ +G
Sbjct: 236 RRSNTHVFAR-----LGTESTFKSFTMTANGVLTRNEAVLELTGDDAVAHVAGAAMGDGD 290
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
D + H A+N SR V K + + ++GK+ V GA + + SLL+
Sbjct: 291 FHHDDTVFITHDAENCESRQVFKKVLRNGATGVFQGKILVKPGAQKTDGYQISQSLLLDE 350
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ P +E H +T+ I ++ L+Y RG+P+E A L+ F+ E +
Sbjct: 351 DSQFLAKPELEIYADDVVCSHGSTSGAIDEDALYYLRARGLPKEIATDLLTQAFLAEAVD 410
Query: 467 KLPME-FAVEAQKLIDISLEGSVG 489
++ E E L+ LE G
Sbjct: 411 EIEDEGLREEVVGLLSGWLERRRG 434
>gi|209527508|ref|ZP_03276011.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|209492057|gb|EDZ92409.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
Length = 458
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/429 (17%), Positives = 149/429 (34%), Gaps = 38/429 (8%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
+ + R A + P+ F DL D
Sbjct: 38 EQLQNIRDNAASWVKELAIPTRRHED---WRFTDLSALLELPFQPATAVELSRDE----- 89
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L +P + L V + D++ GV + + D
Sbjct: 90 ISPLILPEVKGTRLVFVNGFYSPQLSCLDNLP-----------DGVFVGNLGQLDKPLSD 138
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--E 229
+ YL+ P + ALN++ D + V++ + + F
Sbjct: 139 KLGNYLTQ-QPDSQEVFTALNTSSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQP 197
Query: 230 RTLIIADEGSYVSYLE--------GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
RTLI+A+ GS + +E GC+ + V EL DNAE++++ +Q
Sbjct: 198 RTLIVAEPGSKATVIEHYATANILGCSDRTQKTPYFTNTVTELWVGDNAELQHTRLQREL 257
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
+ +G S+ + + G+ ++ + + +
Sbjct: 258 ASSFHIGRTV--------VSQGRSSRYTGNAISLGAKLSRHNFDIHQTAVGTETQLNGLT 309
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
+ NG Q D+ + + + + K I ++ + G++ V + A + +
Sbjct: 310 LVNGQQVADTHSAVFLNHPHGVINQLHKAIVDDRAHAIFNGRIVVPQAAQMTDATQLNRN 369
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LL+ +T P +E + H AT S++ + +FY RG+ E+ + L+++ F
Sbjct: 370 LLLSAKGRVNTKPQLEIVADNVKCAHGATVSQLEADEIFYLRSRGLDEKTSRNLLIDAFA 429
Query: 462 REVLQKLPM 470
E+L+KLP+
Sbjct: 430 AEILEKLPL 438
>gi|325856465|ref|ZP_08172154.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
gi|325483434|gb|EGC86407.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
Length = 447
Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats.
Identities = 91/438 (20%), Positives = 171/438 (39%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A+ + + P RY D L +P+
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTDMQKL-----------------FEPDYGLNLN 68
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+L IP+ E V ++ + + + G+I ++ EHP+L
Sbjct: 69 RLEIPVNPYETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNRIAAEHPEL 128
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT- 231
V+KY + + ALN+ + DG F+Y+PK V+ + + R
Sbjct: 129 VRKYYGRIAHTEADAVTALNTMLAQDGLFIYVPKNVQMERTVQVVNILRSDVDLMVNRRV 188
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ +EG+ +L C + N L V+E DNA ++ + ++ + +++ +
Sbjct: 189 LIVLEEGAKAQFLF-CDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKNTRVS-NV 246
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
Y + S++S + + +T + +GE S +++ Q +D+
Sbjct: 247 Y-------IEQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVVADKSQHVDN 299
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + TS + K + G + + G+V V +GA + + +L
Sbjct: 300 NTLIDHQVPHCTSNELYKYVLDGNAIGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMF 359
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H +T +++D LFY QRGI + A L+ FV EV+ K+ +E
Sbjct: 360 TQPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDRKEAKLLLEFAFVNEVIDKMELE 419
Query: 472 -FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 420 PLRDRLHHLVEKRFRGEL 437
>gi|329770474|ref|ZP_08261853.1| hypothetical protein HMPREF0433_01617 [Gemella sanguinis M325]
gi|328836329|gb|EGF85995.1| hypothetical protein HMPREF0433_01617 [Gemella sanguinis M325]
Length = 431
Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats.
Identities = 78/450 (17%), Positives = 172/450 (38%), Gaps = 33/450 (7%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+ ++ I + NEP+W L R L+ + ++ P + + ++ + S
Sbjct: 8 LSIKTLQNIFSDTNEPEWYLNTRKLSLYKSYSLPFPKLESMNLENWNLFNVDF-----SK 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ E+L Y + V ++ V E+ ++
Sbjct: 63 LRIVESTINTEEILEKYNV---------------NREDFVVIQKNNTLVYVNIPEKY-EN 106
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
V I A+ + + +K +VV ++ +++ + G +V + L
Sbjct: 107 KVEIKNIFSAMND--EHIKDSFMSVVDYAESKVTSVHYTLLNAGLYVDVVDNSEIDEPLQ 164
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
Y I++ F + + + +++E +++ V E+VA D A+I YS
Sbjct: 165 -YIVISDGEQSLFNHVTLQVGKNAKFNFIENYINNIDKDSEPFNIVTEVVAHDGAKINYS 223
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ N PG +G R + I+W A + + + G+ S
Sbjct: 224 SITN-QPGAKRGT-------ILRRGLTYRDALINWNVAAMDEANVYHDNTTHILGDGSEA 275
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + Q+ +++++ N+ I+ G+ S+ + G + +GA S
Sbjct: 276 NLKIVTLGVKEQKTYFNSEVVNQGLNSKGDILQHGVLLDRSHIVFNGVGFIVKGATGSNA 335
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ L + ++ A P + + H A+ +I +E L+Y RG+ + + L
Sbjct: 336 YQSSRMLTLSSDAKADANPMLLIDENDVMAGHGASLGRIDEEQLYYLQSRGLTRKESSRL 395
Query: 456 IVNGFVREVLQKLPMEFAVEA-QKLIDISL 484
+V+GF+ V+ +L ++ + LID +
Sbjct: 396 LVHGFLSPVITELTVDKIKDLVTILIDEKI 425
>gi|291567130|dbj|BAI89402.1| FeS assembly protein SufD [Arthrospira platensis NIES-39]
Length = 458
Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats.
Identities = 75/441 (17%), Positives = 151/441 (34%), Gaps = 41/441 (9%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
+ + R A + P+ F DL
Sbjct: 38 EQLQNIRDNAASWVKELAIPTRRHED---WRFTDLSALLELPFQAA-----TAVELSREE 89
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L +P + L V + D++ GV + + D
Sbjct: 90 ISPLILPEVKGTRLVFVNGFYSPQLSCLDNLP-----------DGVFVGNLGQLDKPLSD 138
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--E 229
+ YL+ P + ALN++ D + V++ + + F
Sbjct: 139 KLGNYLTQ-QPDSQEVFTALNTSSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQP 197
Query: 230 RTLIIADEGSYVSYLE--------GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
R LI+A+ GS + +E GC+ + V EL DNAE++++ +Q
Sbjct: 198 RILIVAEPGSKATVIEHYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQREL 257
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
+ +G S+ + + G+ ++ + + +
Sbjct: 258 ASSFHIGRTV--------VSQGRDSRYTGNAISLGAKLSRHNFDIHQTAAGTETQLNGLT 309
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
+ NG Q D+ + + + + K I ++ + G++ V + A + +
Sbjct: 310 LVNGQQVADTHSAVFLNHPHGVINQLHKAIVDDRAHGIFNGRIVVPQAAQMTDATQLNRN 369
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LL+ +T P +E + H AT S++ + +FY RG+ E+ + L+++ F
Sbjct: 370 LLLSAKGRVNTKPQLEIVADNVKCAHGATVSQLEADEIFYLRSRGLDEKTSRNLLIDAFA 429
Query: 462 REVLQKLPMEFAVEAQKLIDI 482
E+L KLP+ V Q+++
Sbjct: 430 AEILDKLPL---VSLQQILAR 447
>gi|254282895|ref|ZP_04957863.1| FeS assembly protein SufD [gamma proteobacterium NOR51-B]
gi|219679098|gb|EED35447.1| FeS assembly protein SufD [gamma proteobacterium NOR51-B]
Length = 424
Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats.
Identities = 82/425 (19%), Positives = 143/425 (33%), Gaps = 34/425 (8%)
Query: 44 ISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD 103
+S + P W+ + + W P+ R A +++L
Sbjct: 2 LSRAEGAPAWLSDVQARGRAVWDKTPMPT---RRTEAWKYNNLKP--------------- 43
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
L T+ P + A VF + G + +
Sbjct: 44 ----LQTTFSAATGPAS-VSLPAASYPELAGTTLVFIDGLYREDLSQVSLPEGARLVRFA 98
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
+A + + L T V + +A LN A DG V I KGV + + + +
Sbjct: 99 DADAPDSTAILERLGTAVNHDRHLFAPLNDATLADGVQVTIDKGVVVGDPIQVIWATSGE 158
Query: 224 --GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
G +R L S + +E + EL+ DNA++ + +
Sbjct: 159 FENVGVTQRLLFEMSPNSQATLVETFVNLG-SAAAFTNGISELLLQDNAQLNHYRLHLEE 217
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
G G + ++ L GS + + GE + E I
Sbjct: 218 EEGLHVGG--------VHAVLGSHATLNSFHLALGSLLKRIDVTVQHEGEGAHCEINGIY 269
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
+ G +QID T + H + TS +GI A S + G++ +H A + +
Sbjct: 270 LPRGDEQIDYHTCIEHAVPHCTSSETFRGIVADSSRAVFNGRIHIHPDAQKTFAELSNKN 329
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LL + +T P +E H AT +++ L Y RG+P A ++ GF+
Sbjct: 330 LLTSHKAEVYTKPELEIYADDVQCAHGATVAQMDATALHYLRTRGVPAAEAEVMLSYGFI 389
Query: 462 REVLQ 466
EV++
Sbjct: 390 NEVVE 394
>gi|327313029|ref|YP_004328466.1| FeS assembly protein SufD [Prevotella denticola F0289]
gi|326945567|gb|AEA21452.1| FeS assembly protein SufD [Prevotella denticola F0289]
Length = 447
Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats.
Identities = 91/438 (20%), Positives = 171/438 (39%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A+ + + P RY D L +P+
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTDMQKL-----------------FEPDYGLNLN 68
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+L IP+ E V ++ + + + G+I ++ EHP+L
Sbjct: 69 RLEIPVNPYETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNRIATEHPEL 128
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT- 231
V+KY + + ALN+ + DG F+Y+PK V+ + + R
Sbjct: 129 VRKYYGRIAHTEADAVTALNTMLAQDGLFIYVPKNVQMERTVQVVNILRSDVDLMVNRRV 188
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ +EG+ +L C + N L V+E DNA ++ + ++ + +++ +
Sbjct: 189 LIVLEEGAKAQFLF-CDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKNTRVS-NV 246
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
Y + S++S + + +T + +GE S +++ Q +D+
Sbjct: 247 Y-------IEQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVVADKSQHVDN 299
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + TS + K + G + + G+V V +GA + + +L
Sbjct: 300 NTLIDHQVPHCTSNELYKYVLDGNAIGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMF 359
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H +T +++D LFY QRGI + A L+ FV EV+ K+ +E
Sbjct: 360 TQPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDRKEAKLLLEFAFVNEVIDKMELE 419
Query: 472 -FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 420 PLRDRLHHLVEKRFRGEL 437
>gi|88799896|ref|ZP_01115468.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
gi|88777327|gb|EAR08530.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
Length = 429
Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats.
Identities = 74/438 (16%), Positives = 143/438 (32%), Gaps = 44/438 (10%)
Query: 48 KNE----PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD 103
K E P W+ +W+ R+ P+ + +
Sbjct: 13 KQEAWSRPQWLQQWQQAGLDRFRETPWPT---RKTEHWKYT------------------- 50
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
L++ + + E + +A+ ++ +GV + +S
Sbjct: 51 ----PLKSLTGIDWSLPEPKTSVADGIRFDDWNAIRLNIVNGELQNPGDLPTGVSLVRLS 106
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
E E + L D + N A D ++ + + L + +
Sbjct: 107 ECNQEQAERFLAALE--ASRNDFLFDTANQAFIQDAYWLNVDPNTQVQQALHLNYVTDGD 164
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
+ I G+ V+ +E + L A + DNA + + + G
Sbjct: 165 DVLSSSQIWINLGVGAQVTVVE-TFSAGEQGRCLVNANTAITLADNARMTHYHL-MLEEG 222
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D+ G + + + + G + K GE + + +
Sbjct: 223 DAHHIGRVT-------AELQRSAYLDSFHVGIGGVLKRKDIRVRHCGEGAELRLNGVYLP 275
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
G + ID T + H + TS + +GI + + + G++ +H+ A S +LL
Sbjct: 276 KGAEIIDYHTCIEHEVPHCTSEEIFRGIISDSAKAVFNGRIHIHKDAQKSLAEMNNRNLL 335
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ + T P +E H AT +++ D LFY RGI A ++ GF+ E
Sbjct: 336 LSDQAEIDTKPELEIYADDVKCAHGATIARLDDTQLFYFQARGISRAEAEVMLSFGFINE 395
Query: 464 VLQKLPMEFAVEAQKLID 481
+L L E Q L+
Sbjct: 396 LLDSLQDEA---VQNLLR 410
>gi|284050863|ref|ZP_06381073.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
Length = 458
Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats.
Identities = 75/441 (17%), Positives = 151/441 (34%), Gaps = 41/441 (9%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
+ + R A + P+ F DL
Sbjct: 38 EQLQNIRDNAASWVKELAIPTRRHED---WRFTDLSALLELPFQAA-----TAVELSREE 89
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L +P + L V + D++ GV + + D
Sbjct: 90 ISPLILPEVKGTRLVFVNGFYSPQLSCLDNLP-----------DGVFVGNLGQLDKPLSD 138
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--E 229
+ YL+ P + ALN++ D + V++ + + F
Sbjct: 139 KLGNYLTQ-QPDSQEVFTALNTSSLADAAVVWVHQNQVIDTPIHLLFISLSSSQPVTSQP 197
Query: 230 RTLIIADEGSYVSYLE--------GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
R LI+A+ GS + +E GC+ + V EL DNAE++++ +Q
Sbjct: 198 RLLIVAEPGSKATVIEHYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQREL 257
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
+ +G S+ + + G+ ++ + + +
Sbjct: 258 ASSFHIGRTV--------VSQGRDSRYTGNAISLGAKLSRHNFDIHQTAAGTETQLNGLT 309
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
+ NG Q D+ + + + + K I ++ + G++ V + A + +
Sbjct: 310 LVNGQQVADTHSAVFLNHPHGVINQLHKAIVDDRAHGIFNGRIVVPQAAQMTDATQLNRN 369
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LL+ +T P +E + H AT S++ + +FY RG+ E+ + L+++ F
Sbjct: 370 LLLSAKGRVNTKPQLEIVADNVKCAHGATVSQLEADEIFYLRSRGLDEKTSRNLLIDAFA 429
Query: 462 REVLQKLPMEFAVEAQKLIDI 482
E+L KLP+ V Q+++
Sbjct: 430 AEILDKLPL---VSLQQILAR 447
>gi|90021063|ref|YP_526890.1| Iron-regulated ABC transporter permease SufD [Saccharophagus
degradans 2-40]
gi|89950663|gb|ABD80678.1| Iron-regulated ABC transporter permease protein SufD
[Saccharophagus degradans 2-40]
Length = 439
Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats.
Identities = 72/424 (16%), Positives = 149/424 (35%), Gaps = 32/424 (7%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ + + WL + P+ + + +L ++
Sbjct: 18 WLQDKTQQGKQAWLGHRFPT---RKTENWKYTNL----RALEQGDYLRAANIGAAPEALP 70
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS---GVIFMPISEAICEH 169
+ L I E L V VA + ++L ++ G+ S A
Sbjct: 71 QHLTIAGLEAVKLVFVNGQFVA------------SLSDDLARANVAGLELTLFSNASDAQ 118
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF- 228
+ + L +V ++ LN+A DG ++ + K + + + + +
Sbjct: 119 KKAINEQLGQLVNSTKYEFSGLNTAQLNDGVYINVAKNQQVAKPIHIVWMTTAQDSAFTV 178
Query: 229 -ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R L+ + G+ +E + +N +V E +NA +++ +Q
Sbjct: 179 PHRLLVNLETGASACVIEQFVSGDEAQNSFTHSVSEFNVGENARLQHYRLQQEQEDAIHI 238
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
G + + + GS I +GE S + + + Q
Sbjct: 239 GG--------VFVRLDRSADLDSFHMAFGSKIKRVDIEVQHQGEGSTSKINGVYLPKNNQ 290
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
ID T + H + TS+ +GI A ++ + G++ +H A + +LL +
Sbjct: 291 HIDYHTCIEHAVPHCTSQETFRGIIADSAHAVFNGRIHIHPDAQKTLAELSNKNLLTSDK 350
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H AT +++ ++ L Y RGI + A ++ GF+ E++
Sbjct: 351 AQIDTKPELEIYADDVRCAHGATIAQLDEKSLNYLRTRGISLDEAQVMLSYGFINELIND 410
Query: 468 LPME 471
+ +E
Sbjct: 411 VALE 414
>gi|260433729|ref|ZP_05787700.1| FeS assembly protein SufD [Silicibacter lacuscaerulensis ITI-1157]
gi|260417557|gb|EEX10816.1| FeS assembly protein SufD [Silicibacter lacuscaerulensis ITI-1157]
Length = 426
Score = 226 bits (576), Expect = 7e-57, Method: Composition-based stats.
Identities = 84/432 (19%), Positives = 155/432 (35%), Gaps = 38/432 (8%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
+ R A R M P R + +P + +P + +++
Sbjct: 27 RDAREAALARLRAMGLP---GRRDEYWKYTRPDTLISP-EPPTAEVFHTDEPMVFDGFDR 82
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
L I + GV + + + D + VS+ + L+ + I A + L +
Sbjct: 83 LKI-----VFVDGVFSPEDSDDLTLEGVSI-----DRLED--ICCKDIHWAKQLYGVLEE 130
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ + V AALN+A DG +++ + +S +R + + +I
Sbjct: 131 RGQTPVQRP----LAALNTAFAQDGVAIHVTG--KPSKPISLIYRHESESSDAILHHVIR 184
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G+ V+ LE A R +E+ D + + Q G + +
Sbjct: 185 VESGAEVTILENGPAAARF-----NKCIEIDIADGGTLHHVRAQ----GRDHQRRAATHM 235
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
T+ G S L +T L G+ + + +G D
Sbjct: 236 FTR----LGKESVYKSFTLTVNGVLTRNEQVVELTGDDAVAHVAGACVGDGDFHHDDTVF 291
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H A N SR V K + + ++GK+ V GA + + SLL+ ++ P
Sbjct: 292 ITHDAVNCESRQVFKKVLRNGATGVFQGKILVKAGAQKTDGYQISQSLLLDDDSQFLAKP 351
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H +T+ I + LFY RG+P + A ++ F+ E ++++ E
Sbjct: 352 ELEIYADDVACSHGSTSGAIDETALFYLRSRGVPAKEATNMLTLAFLAEAVEEIEDEALA 411
Query: 475 EAQKLIDISLEG 486
E I LEG
Sbjct: 412 ED---IVSRLEG 420
>gi|326801400|ref|YP_004319219.1| FeS assembly protein SufD [Sphingobacterium sp. 21]
gi|326552164|gb|ADZ80549.1| FeS assembly protein SufD [Sphingobacterium sp. 21]
Length = 435
Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats.
Identities = 76/423 (17%), Positives = 148/423 (34%), Gaps = 39/423 (9%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EP + R A+ R+ P+ ++ + +L P D + +
Sbjct: 27 QEPQ--VSLRKEAFARFKDWGFPT---LKAEDWKYTNLQ----PLINQHYLLNDAIPGKN 77
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ T + + + + V ++++L AI +
Sbjct: 78 VDT-----------------SQAIIKGLDAYRLILVNGRYRKDLSDVITEPGIFVSAIED 120
Query: 169 --HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+ +L + + DN ALN+A+ G +++I + + + +
Sbjct: 121 VANNELFAAHFAKYADKTDNPLVALNTALHEGGLYIHIGQNIALKKSIQIIHVASSSEAI 180
Query: 227 QFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
+ R L + D + +E A + L+ V ELV +NA +++ +Q
Sbjct: 181 FNQTRNLFVLDPNAEAEIIESFIANGSTIS-LNNTVSELVLNENAHLQHYYLQTSGEKSR 239
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA-ITWKYPSCLLRGEQSCGEFYSIAISN 344
++ + S + + + L Y + ++
Sbjct: 240 --------YLNHTEVKQAKHSLYNNYNCSFPGSSFVRNNINVRLDDTSVESHLYGVTLTA 291
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q +D+ T + H + S K I+ S + GK+ V A + F Q +++LI
Sbjct: 292 KDQLVDNHTIVDHRMPHCESYEWYKNIAQDTSTAVFNGKIFVQPDAQKTNAFQQNNNMLI 351
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G+ T P +E H T + DE LFY RGI E +A L+V+ F +V
Sbjct: 352 GDKASILTKPQLEIFADDVKCSHGCTMGQFDDEALFYLKARGIGEASARVLLVHAFAFDV 411
Query: 465 LQK 467
+K
Sbjct: 412 TEK 414
>gi|37520941|ref|NP_924318.1| hypothetical protein glr1372 [Gloeobacter violaceus PCC 7421]
gi|35211936|dbj|BAC89313.1| glr1372 [Gloeobacter violaceus PCC 7421]
Length = 444
Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats.
Identities = 86/428 (20%), Positives = 155/428 (36%), Gaps = 36/428 (8%)
Query: 43 FISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLD 102
FI+A+ E + +L R A R++ + P R DL + + + +
Sbjct: 23 FIAARPGEAEAVLASRRAAMGRFVQLGVP---HRRLENWRHTDLSALTKNRFTLAAEPVS 79
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+DP L Y G RE + G+ +++++ S ++ ++ E
Sbjct: 80 -IDPVQLVPYTFSG--ARELVFVDGLFSAELSNPGKAQSGLLLGSYAE---------CLP 127
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
+A+ V P ALN A + DG+ V + R + F
Sbjct: 128 EDALR----------WAVAPEAAEALEALNGAYWQDGACVDLAADARVEEPIHLLFIATG 177
Query: 223 KGT--GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
QF R I A GS + +E A V + +A++ + +
Sbjct: 178 ADLPLAQFVRNRITAGPGSRATIIE-TYASLGAGVHFTCPVGAVDVGADADLDHYRL--- 233
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
Q ++ T R G ++ G + L G S + +
Sbjct: 234 ----GQENAAAFHLATSR-VRLGRDARFKSLAFVAGGGLVRHDLFAELAGPGSEATLHGL 288
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++ G + +D + H A + SR + KGI AG + + G V V AA +
Sbjct: 289 YLAGGTRHVDHHLWVRHSAPHAASRQIYKGILAGRARAVFNGNVFVASEAAKTDAKQTNR 348
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
+LL+ + H+ P +E H +T ++ +E LFY RG+ E A L+ F
Sbjct: 349 NLLLSDAALVHSNPQLEIYAGDVRCTHGSTVGQLDEEALFYLRSRGLDEAQAKNLLTRAF 408
Query: 461 VREVLQKL 468
++ + +
Sbjct: 409 AGDLFEDI 416
>gi|220916009|ref|YP_002491313.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953863|gb|ACL64247.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
Length = 437
Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 163/439 (37%), Gaps = 32/439 (7%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EP W+ + R A + P+ F L + P +
Sbjct: 17 GEPAWLADARAGALAAFRAAGLPTPRHED---WRFTSLAALSTLSLAPAPDDGEGPA--- 70
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +LAG + A + +G + +++A+
Sbjct: 71 -------------RALLAGRPAPEGARLVFENGRFRRELSSGAPLPAGAVLGSLADALRH 117
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TG 226
P+ V+ +L + V + ALN A+ DG+F+ +P G R + F G
Sbjct: 118 APEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVEAPIELVFATGAAGRAVA 177
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R L++A EG+ + E + L +V ELV + AEI++ +Q+
Sbjct: 178 VHPRVLVVAGEGARATLAE--VHLGTSDTYLANSVTELVLGEGAEIEHLRLQDEGARAFH 235
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V+ + RS+++ L G + L GE + + +++G
Sbjct: 236 --------VSALFAEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGA 287
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ D+ T + H T+ KGI G + + G++ V GA + +LL+ +
Sbjct: 288 RTTDAFTWVEHAVPRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSD 347
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ T P +E H T ++ + LFY RG+ E A +L++ F E++
Sbjct: 348 DAIVDTKPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVD 407
Query: 467 KL-PMEFAVEAQKLIDISL 484
+ P A++L+ L
Sbjct: 408 LVRPAGLHARARELVAARL 426
>gi|325269678|ref|ZP_08136291.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
gi|324988046|gb|EGC20016.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
Length = 447
Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats.
Identities = 91/438 (20%), Positives = 171/438 (39%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A+ + + P RY D L +P+
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTDMQKL-----------------FEPDYGLNLN 68
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+L IP+ E V ++ + + + G+I ++ EHP+L
Sbjct: 69 RLEIPVNPYETFKCDVPNLSTSLYFIVNDQFYAKALPKTKLNDGIIVDSLNRMATEHPEL 128
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT- 231
V+KY + + ALN+ + DG F+Y+PK V+ + + R
Sbjct: 129 VRKYYGRIAHTEADAVTALNTMLAQDGLFIYVPKNVQMERTVQVVNILRSDVDLMVNRRV 188
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ +EG+ +L C + N L V+E DNA ++ + ++ + +++ +
Sbjct: 189 LIVLEEGAKAQFLF-CDHAADNRNFLATQVIEAFVGDNARLELNCLEETHAKNTRVS-NV 246
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
Y + S++S + + +T + +GE S +++ Q +D+
Sbjct: 247 Y-------IEQQRNSRVSHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVVADKSQHVDN 299
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + TS + K + G + + G+V V +GA + + +L
Sbjct: 300 NTLIDHQVPHCTSNELYKYVLDGNAVGAFAGRVLVRKGAQKTLSQENNRNLCASRTSRMF 359
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H +T +++D LFY QRGI + A L+ FV EV+ K+ +E
Sbjct: 360 TQPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDRKEAKLLLEFAFVNEVIDKMELE 419
Query: 472 -FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 420 PLRDRLHHLVEKRFRGEL 437
>gi|85716313|ref|ZP_01047286.1| FeS assembly protein SufD [Nitrobacter sp. Nb-311A]
gi|85696829|gb|EAQ34714.1| FeS assembly protein SufD [Nitrobacter sp. Nb-311A]
Length = 440
Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats.
Identities = 72/411 (17%), Positives = 145/411 (35%), Gaps = 26/411 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A+ + P R + DL + + +
Sbjct: 33 EARQAAFDDFARRGLP---YRRIEEWKYTDLRTLLREIAPLAATPDQAALARAAKAVVAR 89
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+ +L + D ++ V + L+ + V DL+
Sbjct: 90 DAKGAYKLVLVDGVFAPQLSDQTPETGVEVRALRNILENNDVAAR---------ADLLIT 140
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
++ + +LN+A+ TDG + + + + L + T F R+L+
Sbjct: 141 TAAS------DTMISLNTALATDGVVIDVAENLNLSRPLHIVHITTQSSTAAFTRSLLRL 194
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G++ + +E A + V L D AE+++ + + I
Sbjct: 195 ANGAHATLIESFVAAEGAAAYQAHDSVVLWIGDGAELQHVRLVEDAHDAANISTAIVT-- 252
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G +++ + L G+A++ GE S + + + NG Q D+ +
Sbjct: 253 ------IGAKARFNSLNLTCGAAVSRYQGFIKFGGEGSHADVNGVNLLNGHQHGDTTLVL 306
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + +S V + + +++ ++GK+ V A + +LL+ + A P
Sbjct: 307 DHAVPHCSSNEVFRAVLDDQAHSVFQGKIIVQPDAQKTDGKMMTRALLLSDGAEADNKPE 366
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+E H AT + + LFY RG+ E+ A AL++ FV E ++
Sbjct: 367 LEIFADDVTCGHGATVGALDESLLFYLRARGLSEKEAQALLIQAFVGEAVE 417
>gi|307565753|ref|ZP_07628222.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
gi|307345579|gb|EFN90947.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
Length = 447
Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats.
Identities = 87/437 (19%), Positives = 173/437 (39%), Gaps = 27/437 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M + R A+ + + PS RY + +++ P + L ++ + +T++
Sbjct: 26 MNDLRDEAFMNFKKLGFPSKKEERY---KYTNIHSLFEPNYGLNLNRL-EIPIDPYKTFK 81
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
G+ ++ + + GVI +++A +P+L+
Sbjct: 82 ------------CGIPNLSTSLYFIVNDQLYTKKLPNTYLGEGVIIDSLAKAATHYPELI 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-L 232
KY + ++ ALN+ + DG F+Y+PK V+ + + R L
Sbjct: 130 TKYYGKLAKTSEDGITALNTMLAQDGLFIYVPKNVKLKNTVQIVNILRSDVDLMVNRRVL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II +EG+ +L C D N L V+E +NA I + ++ + + +
Sbjct: 190 IILEEGAEGQFLF-CDDTADDRNFLTTQVIEAFVGNNAHIDLNCLEETHTKNVRISNAF- 247
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ SK S + + IT + +G+ S I++ Q +D+
Sbjct: 248 -------IQQESYSKASHNVITLHNGITRNMLNLTFKGQHSECFINGCIIADKEQHVDNN 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H A + S + K + + + G V V + A + + +L+ N ++
Sbjct: 301 TLIDHAAPHCQSHELYKYVLNDKAVGAFAGLVLVRKEAQKTTSIETNRNLVSTNTARMYS 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H +T +++D LFY QRGI ++ A L+ F+ EV+ K+ ++
Sbjct: 361 QPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDQQEARTLLQTAFIYEVIDKIELDS 420
Query: 473 AVE-AQKLIDISLEGSV 488
E L++ G +
Sbjct: 421 LRERLHLLVEKRFRGEL 437
>gi|92117849|ref|YP_577578.1| FeS assembly protein SufD [Nitrobacter hamburgensis X14]
gi|91800743|gb|ABE63118.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
hamburgensis X14]
Length = 441
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 71/411 (17%), Positives = 139/411 (33%), Gaps = 26/411 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + ++ P R + DL + +
Sbjct: 36 RQKAFEAYESLGLP---HRRVEDWKYTDLRVLMREVLPLAAAPDQAALAKA--------- 83
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
EIL + D V V + G+ E + D
Sbjct: 84 ----GEILKAQSLGDAYRFVLVDGVFVPQLSDVGGLEDGLRARSFHEVLGTGTDQSADLF 139
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+T + +LN+A+ TDG + + + + F R+ + +
Sbjct: 140 TT--SATTDVMVSLNAAMTTDGVIIEVGDRISLTKPIHVVHVTTVSSASAFTRSRLTIGK 197
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ V+ +E A ++ + + D A++ + + + I
Sbjct: 198 AARVTLIESFVAADDAKSYQAHDALIVAVGDGADVAHIRLMADADDATNISSAIVT---- 253
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G +K++ L +G ++ L GE S F +++ Q D + H
Sbjct: 254 ----VGGEAKLNLFSLTSGGRLSRYQVFATLEGEGSDVFFNGVSLLKDTQHADMTLVVDH 309
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ TSR V + + +++ ++GK+ V A + +LL+ + A + P +E
Sbjct: 310 AVPHCTSREVFRAVVDDRAHSVFQGKIIVRPDAQKTDGKMMTRALLLSDGAEADSKPELE 369
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT + D LFY RG+ E+ A AL++ FV E ++ +
Sbjct: 370 IFADDVTCGHGATIGALDDSLLFYLRARGLSEKEAQALLIQAFVGEAIESI 420
>gi|15789749|ref|NP_279573.1| hypothetical protein VNG0527C [Halobacterium sp. NRC-1]
gi|169235465|ref|YP_001688665.1| sufB domain-containing protein [Halobacterium salinarum R1]
gi|10580127|gb|AAG19053.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726531|emb|CAP13316.1| sufB domain protein [Halobacterium salinarum R1]
Length = 404
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 97/445 (21%), Positives = 184/445 (41%), Gaps = 63/445 (14%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++ + +R I+ +++EP W+ E RL A + PS
Sbjct: 9 ISAETVRRIADERDEPAWLRETRLDALEALDDLAFPSVIETPGRKW-------------- 54
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+L+D+D ++ L P+ + E V V++ D++
Sbjct: 55 ---TTLEDLD------FDALVDPLSQTEDKDQVGAENARVESFHDALQDDDL-------- 97
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
D V+ +V+ N AL++A+FT G+ VY+P GV
Sbjct: 98 --------------ADRVEDAFGSVIDPHQNRLTALSTALFTTGTVVYVPAGVDAED--- 140
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE-NQLHAAVVELVALDNAEIKY 274
R + F TL+I ++ + + LE + + ++ +VE+ A +N+ ++Y
Sbjct: 141 VTIRTSMNSRSLFNYTLVITEDNATATILERQDTGDDVDGERYYSGIVEVDAGENSYVQY 200
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
++Q++ YN+ KRG + ++W + GS +T S L G+ S
Sbjct: 201 GSLQDFDEQ-------TYNYTLKRGHA-DTYATVNWIEGNIGSRLTKTGVSTELAGDASE 252
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + Q D K+ H A++TT+ +V++G+ + + Y G V A +
Sbjct: 253 TKIVGAFFGHDDQHFDLDAKVWHRAEHTTADLVTRGVIDDDARSVYEGVQDVGSDAWDTS 312
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
++ + ++L++ + A P + N H AT ++ E LFY RG+ + A
Sbjct: 313 SYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQVDQETLFYMQDRGLTAQQATD 372
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKL 479
++V GF VL++ VE Q+L
Sbjct: 373 MLVAGFFVPVLEE------VEVQEL 391
>gi|81300546|ref|YP_400754.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
elongatus PCC 7942]
gi|81169427|gb|ABB57767.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
elongatus PCC 7942]
Length = 442
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 87/421 (20%), Positives = 150/421 (35%), Gaps = 45/421 (10%)
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A R + PS + F DL + P E L
Sbjct: 45 QARDRLTDLAIPS---TKVEDWRFTDLSLLLKRSFVAAPAQAKAEFVEPL---------- 91
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+LA V V VD F + + E G+ +A L
Sbjct: 92 ----LLADVPLRAVFVDGQFRADLSSADWPE-----GLSLTVGFDAAIAQNLL------- 135
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTLIIADE 237
D+ +A LN+A F + + + G L + + F R LI
Sbjct: 136 ----ADDLFATLNTAGFGQAAVIRVAAGAAIAQPLHLLWISSSTSETAFSQPRALIELGA 191
Query: 238 GSYVSYLEGCTAPQRDE--NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
S ++ +E D + AV E+ NA++K+S VQ GD G
Sbjct: 192 NSALTLIEDFAPLGNDCTADYFVNAVTEIQLGANAQLKHSRVQR--DGDRAIHIGTT--- 246
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+ + TG+ ++ G Q+ +++++G + +D+ + M
Sbjct: 247 ---AVRQERDSRYHGIAVSTGAHLSRHNYLAAQDGSQAETILDGLSLADGDRLVDTHSGM 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+ S+ + K I++ + G+V V + A + +LL+ + P
Sbjct: 304 FFNQPHGRSQQLHKCIASDRGRAVFSGRVVVPQIAQQTDAAQLSRNLLLSSRARIDAKPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT S++S++ +FY RG+ + A L++ F E+LQKLP E
Sbjct: 364 LEIVADDVKCSHGATVSQLSEDEIFYLQSRGLNQAEATHLLIEAFAGEILQKLPSAQLRE 423
Query: 476 A 476
A
Sbjct: 424 A 424
>gi|89068819|ref|ZP_01156202.1| FeS assembly protein SufD [Oceanicola granulosus HTCC2516]
gi|89045589|gb|EAR51652.1| FeS assembly protein SufD [Oceanicola granulosus HTCC2516]
Length = 432
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 90/440 (20%), Positives = 151/440 (34%), Gaps = 45/440 (10%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W+ E R A R M P R F D P SL +P
Sbjct: 28 AWLREAREAALGRVQAMGLP---HRRDEYWRFTD------------PTSLSAAEPAPAAL 72
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
++ P+ + + + V VD VFD+ + ++L G+ ++EA +
Sbjct: 73 FDPQEAPLFD----SVDRLRLVFVDGVFDAEA-----SDDLALEGIEIERLAEAGAKDIH 123
Query: 172 LVKKYLSTVV----PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+ + D AALNSA TDG + + + + +
Sbjct: 124 WARDVYGRLEAQGHEKTDRPLAALNSATATDGVVIRVTGT--PAKPVHLVYERASERADA 181
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
++ ++G+ V+ LE R +E+ D A VQ
Sbjct: 182 VLHHVVKVEQGASVTLLETGPGAARLSTG-----LEVDVADGAACHLVRVQGRDHERRAE 236
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI-SNGF 346
T G S L +T L G+ + + +
Sbjct: 237 --------TSVFARLGTESTFKTFTLTFNGVLTRNECVVELTGDDAVAHIAGACLGAGKD 288
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
D + H A + SR V K + + ++GK+ V +GA + + SLL+ +
Sbjct: 289 FHHDDTVFVTHDAVDCESRQVFKKVLRNAATGVFQGKILVRKGAQKTDGYQISQSLLLDD 348
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ P +E H +T+ I E LFY RG+ E A L+ FV E L+
Sbjct: 349 DAQFLAKPELEIYADDVACSHGSTSGAIDPEALFYLRSRGVGEVEATNLLTLAFVAEALE 408
Query: 467 KLPME-FAVEAQKLIDISLE 485
++ E +A E ++ + LE
Sbjct: 409 EIEDEAYADELRERLAGWLE 428
>gi|218289788|ref|ZP_03493988.1| SufBD protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240079|gb|EED07264.1| SufBD protein [Alicyclobacillus acidocaldarius LAA1]
Length = 423
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 84/431 (19%), Positives = 174/431 (40%), Gaps = 39/431 (9%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPA--IDFDDLYYYAAPKSIVGPQSLDDVDP 106
EP + E R A++ + +++ + D +
Sbjct: 18 QEPKAVTEKRDAAWKLYESLEVHRLEKTDLRRVTWDVGE--------------------- 56
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
++ PI E LA V+ + + + D + EE K+ GV + I EA
Sbjct: 57 -----FDSSEAPIPEG-ALAYVRGIRHSYALIVDGLIREIRLAEEAKEKGVALVSIHEAC 110
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
HP++ ++ T+VP + + ALN A+F G F+++P+G + + +
Sbjct: 111 ERHPEIWNRHFGTIVPAEEAKWTALNMAIFAGGVFLHVPRGAELEQPVEVVYVWTGRPFS 170
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R+L++ + S + Y E T +++ V+E+ A + ++ + W G
Sbjct: 171 ACSRSLVVTEPLSRLRYAE-TTFAADGGRFVNSHVLEVFAGQASRVEIAMADEWAKGG-- 227
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+FVT+R +++ W +T + L G+ S + + +G
Sbjct: 228 -----IHFVTRRAKTDND-AEVDWVVADTSDGQAVETIESALVGQGSRSFTRVMGLGHGR 281
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
++ M H+ ++T S I G +N +R + + +GA + + +++
Sbjct: 282 AHVEITASMRHVGRHTESEIAMNGALRDRANVIFRSRTQIEKGAVGAGSEQHDRMIMVDG 341
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A IP + + H A+ KI ++Y + RGIP+ A+ +I+ G++R+ +
Sbjct: 342 TARADAIPMLLIDENDVERCGHAASVGKIDPLQVYYLMSRGIPQSVAVQMIIWGYLRDSV 401
Query: 466 QKLPMEFAVEA 476
+ LP + +
Sbjct: 402 EALPSDAMRDL 412
>gi|325956936|ref|YP_004292348.1| hypothetical protein LAC30SC_06415 [Lactobacillus acidophilus 30SC]
gi|325333501|gb|ADZ07409.1| hypothetical protein LAC30SC_06415 [Lactobacillus acidophilus 30SC]
Length = 407
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 163/434 (37%), Gaps = 58/434 (13%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ + +S+K N+PDW++ RL A+ + P Y
Sbjct: 3 SKTTFQELSSKYNDPDWLINERLEAFNLIEKLLLPK----------MQQFKY-------- 44
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
D + + EQ L S EL+++
Sbjct: 45 -----SDWPLTVNNDFAL------EQSALKISDNS-------------------ELEENK 74
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
VI I EA ++P+LV+KYL++V ++ A N+A +G F+YIP V +
Sbjct: 75 VICQDIFEASKQYPELVQKYLNSVSHFNEDKLLAYNTAFMNNGLFLYIPDNVEIQEPIEI 134
Query: 217 YFRINE-KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
N + +I+ + S +++ + ++N L VVE+ A+ + +++S
Sbjct: 135 ELVQNSMSKSALISHIVIVVGKNSKAKFIQHLSTVGHEKN-LANLVVEVQAVAGSNVEFS 193
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++ R + I W T + L GE S
Sbjct: 194 SLDEMEEN--------TTLYFNRRANLARDAHIEWNVAFMNDCNTVGDLASELLGEGSYA 245
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+IAI+ G Q++ ++++ ++T I +G+ S + G + GA S+
Sbjct: 246 YSKAIAITTGNQKVAVNNRVINRGPHSTGLINQRGVLLEDSRLIFNGIGQIVHGAHGSKA 305
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
Q L++ + P + + H A+ + + Y + RGIP A +
Sbjct: 306 DQQNRVLMMSDTAQGDANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPYAQAERM 365
Query: 456 IVNGFVREVLQKLP 469
+++GF+ VL +P
Sbjct: 366 VIHGFLDPVLGAIP 379
>gi|56752363|ref|YP_173064.1| hypothetical protein syc2354_c [Synechococcus elongatus PCC 6301]
gi|56687322|dbj|BAD80544.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 442
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 87/421 (20%), Positives = 150/421 (35%), Gaps = 45/421 (10%)
Query: 60 LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
A R + PS + F DL + P E L
Sbjct: 45 QARDRLTDLAIPS---TKVEDWRFTDLSLLPKRSFVAAPAQAKAEFVEPL---------- 91
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
+LA V V VD F + + E G+ +A L
Sbjct: 92 ----LLADVPLRAVFVDGQFRADLSSADWPE-----GLSLTVGFDAAIAQNLL------- 135
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTLIIADE 237
D+ +A LN+A F + + + G L + + F R LI
Sbjct: 136 ----ADDLFATLNTAGFGQAAVIRVAAGAAIAQPLHLLWISSSTSETAFSQPRALIELGA 191
Query: 238 GSYVSYLEGCTAPQRDE--NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
S ++ +E D + AV E+ NA++K+S VQ GD G
Sbjct: 192 NSALTLIEDFAPLGNDCTADYFVNAVTEIQLGANAQLKHSRVQR--DGDRAIHIGTT--- 246
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+ + TG+ ++ G Q+ +++++G + +D+ + M
Sbjct: 247 ---AVRQERDSRYHGIAVSTGAHLSRHNYLAAQDGSQAETILDGLSLADGDRLVDTHSGM 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+ S+ + K I++ + G+V V + A + +LL+ + P
Sbjct: 304 FFNQPHGRSQQLHKCIASDRGRAVFSGRVVVPQIAQQTDAAQLSRNLLLSSRARIDAKPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT S++S++ +FY RG+ + A L++ F E+LQKLP E
Sbjct: 364 LEIVADDVKCSHGATVSQLSEDEIFYLQSRGLNQAEATHLLIEAFAGEILQKLPSAQLRE 423
Query: 476 A 476
A
Sbjct: 424 A 424
>gi|304383862|ref|ZP_07366319.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
gi|304334940|gb|EFM01213.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
Length = 455
Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 161/437 (36%), Gaps = 25/437 (5%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A+ + + P+ Y D L+ AP + +D + T+
Sbjct: 35 MNAMREQAFEDFKRIGIPTKKVEHYKYTDMQALF---APDYGLNLNRID-IPINPYETF- 89
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
V + V + +GVI + + EHP+LV
Sbjct: 90 -----------PCDVPNLSTTLYFVINDRFYDKHLPAATLPAGVIVDSLKKVAEEHPELV 138
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+KY + D+ ALN+ + DG FVY+PK VR + + R ++
Sbjct: 139 EKYYGKLAATCDDSMTALNTMLAQDGLFVYVPKNVRLNRCIQVLNLLRSDVDLMANRRVV 198
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA E + C D L V+E NA + ++ + + + +Y
Sbjct: 199 IALEEGAEAKFLFCDHAADDRQFLTTQVIEAYVGSNASLDLYCLEETHERNVRVS-NVY- 256
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ S+++ + + T + +GE + I++ Q +D+ T
Sbjct: 257 ------FAQEANSRLNHNVITLHNGSTRNSTHLVFKGEGAECHLSGCVIADKHQHVDNNT 310
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H TS + K + + + G + V GA + + +L + N +T
Sbjct: 311 VIDHQVPRCTSNELYKYVLDDEATGAFAGLILVREGAQKTSSNEVNQNLCMTKNAHMYTQ 370
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-F 472
P +E H +T +++D +FY QRGI E A L+ F+ EV+ ++ +E
Sbjct: 371 PMLEIYADDVKCSHGSTVGQLNDAAMFYMRQRGISEHEAKLLLQVAFINEVIDQMLLEPL 430
Query: 473 AVEAQKLIDISLEGSVG 489
L++ G +G
Sbjct: 431 RDRLHHLVEKRFRGELG 447
>gi|29654655|ref|NP_820347.1| FeS assembly protein SufD [Coxiella burnetii RSA 493]
gi|161831539|ref|YP_001597200.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
gi|29541923|gb|AAO90861.1| SufD [Coxiella burnetii RSA 493]
gi|161763406|gb|ABX79048.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
Length = 426
Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 150/431 (34%), Gaps = 41/431 (9%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
W+ + +L P + + ++ A G + D+ +L +L
Sbjct: 22 WQKEQLKTFLLHGFP---HRKVENWKYTNVTPIAEQAFSFGENTDTDIADFILPDAYRLV 78
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ G +++ + S +T+ K + + AI +
Sbjct: 79 -------FINGHFAPRLSDLSGLPSAVQMTSLKNIQRD-----IQNELAIKKDYQ----- 121
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLII 234
++ +N A+F DG F+ +PK + T R +I+
Sbjct: 122 ---------TAFSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVIL 172
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+E + E + V ++ A ++ +Q +
Sbjct: 173 LEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIH- 230
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ S+++ + GS ++ + L + + N +D+ T+
Sbjct: 231 -------QNRHSQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTR 283
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + TS+ KG+ A S + GK+ V A + +L++ ++ T P
Sbjct: 284 IDHRVSHCTSQQNYKGVLADKSRAVFNGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKP 343
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FA 473
+E N H AT ++++E +FY RGI AA L+ F EV++ LP + A
Sbjct: 344 ELEIYNDDVKCTHGATVGQLNEEAIFYLQSRGINRGAAEHLLTCAFANEVVEMLPNKVIA 403
Query: 474 VEAQKLIDISL 484
Q+L+ L
Sbjct: 404 DRIQQLVTDRL 414
>gi|282859029|ref|ZP_06268165.1| FeS assembly protein SufD [Prevotella bivia JCVIHMP010]
gi|282588197|gb|EFB93366.1| FeS assembly protein SufD [Prevotella bivia JCVIHMP010]
Length = 447
Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 164/437 (37%), Gaps = 27/437 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A+ + + P+ RY + D+ P + L ++ + +T++
Sbjct: 26 MNALREEAFNNFKKLGFPTKKVERY---KYSDIPTLFKPDYGLNLSRL-EIPVDPYKTFK 81
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
V ++ + + + G+I +S+ P+LV
Sbjct: 82 ------------CDVPNLSTSLYFIVNDQFYTKEPPKVKLDEGIIIDSLSQVATSRPELV 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-L 232
KY + + ALN+ + DG F+Y+PK V+ + + R L
Sbjct: 130 AKYYGKLAKTEKDGITALNTMLAQDGLFIYVPKNVKLERTVQIVNILRSDVDLMVNRRVL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+ +EG+ +L C D L V+E +NA + + ++ + + +
Sbjct: 190 IVLEEGAEAKFLF-CDDTADDRKFLTTQVIEAFVGNNAVLDLNCLEETHTKNVRVSN--- 245
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ SK S + + IT +GE S I++ Q++D+
Sbjct: 246 -----VFIEQQSHSKASHNIITLHNGITRNMLDLTFKGEHSECFLNGCVIADKEQRVDNN 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H N S + K + + + G V V GA + + +L+ +T
Sbjct: 301 TMIDHAVPNCDSHELYKYVLDDKAVGAFAGLVLVREGAQKTTSVETNRNLVATKTAHMYT 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME- 471
P +E H +T +++D LFY QRGI ++ A L+ F+ EV+ K+ +E
Sbjct: 361 QPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDQKEARTLLQTAFIYEVIDKIELEP 420
Query: 472 FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 421 LRDRLHLLVEKRFRGEL 437
>gi|159905885|ref|YP_001549547.1| SufBD protein [Methanococcus maripaludis C6]
gi|159887378|gb|ABX02315.1| SufBD protein [Methanococcus maripaludis C6]
Length = 408
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 90/405 (22%), Positives = 185/405 (45%), Gaps = 26/405 (6%)
Query: 85 DLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
DL Y PK + SL+++ + + +G+ I E+ + +S +
Sbjct: 29 DLSMYPTPKENLLKVDSLNELSDDHKKALANVGVDIEEKNTI--------GSYVQVNSDA 80
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
+ T + +I MPI++A+ + + Y + V +GD + A + + T+G F+
Sbjct: 81 IYTKMYSD-----IIIMPITQALEKFE--LDDYYWSAVKMGDKYGARVAN-ELTEGYFIR 132
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
PKGV+ + L T I + Q +II ++G+ ++ + GCT ++ LH V E
Sbjct: 133 APKGVKKTIPLQTCLLIGSEEVSQNVHNIIIVEDGAELNVITGCTTSPHVKSGLHLGVSE 192
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NA++ ++ + NW ++ I+ Y
Sbjct: 193 IYIGKNAKLTFTMIHNWGE-------NVHVRPRTAIKMDDDSIFINNYVTMMPVKSIQSY 245
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
P+ G+ + F +I G +ID G+K++ +++ + ++S+ I + RG
Sbjct: 246 PTAYCEGKNAKATFQTIVYGKGDSKIDMGSKVVLSGEHSAADMISRVIVVDNAEVISRG- 304
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ +H + +C L++ N+ +P +E++ + L HEA KI+++ + Y +
Sbjct: 305 -HLVGAESHVKGHLECRGLILSNDGHILAVPELEAERTDLELSHEAAVGKIAEDQIMYLM 363
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
RG+ E+ A +LI+ GF+ + LP E A ++++D++LE ++
Sbjct: 364 SRGLSEDEAASLIIKGFLSVDITGLPPELAKSVKEMMDMTLENAM 408
>gi|149202625|ref|ZP_01879597.1| SufBD [Roseovarius sp. TM1035]
gi|149143907|gb|EDM31941.1| SufBD [Roseovarius sp. TM1035]
Length = 429
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 87/438 (19%), Positives = 150/438 (34%), Gaps = 43/438 (9%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W R A R M P R F A ++ L+D +P+
Sbjct: 26 WATGAREAALTRLQAMGLPD---RRDEYWKFTRPDSLAQAEAPHAALFLNDDEPDSFAAV 82
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
++L + V VD VFD+ + ++L GV +S A
Sbjct: 83 DRLKL---------------VFVDGVFDAEA-----SDDLTLEGVRIDRLSMAAKSDIHW 122
Query: 173 VKKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
V+ AALN+A +DG +++ R ++ + + +
Sbjct: 123 VRDLYGVLEERGQTPVVRPLAALNTAYASDGVLIHVTG--RPSKPINLVYVHKSEVSDAI 180
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+I D + V+ LE A R V+E+ D A + Q G +
Sbjct: 181 LHHVIKLDPEAEVTILENGPAAARF-----NKVMEVDVGDGARFHHIRTQ----GRDHER 231
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ + G S L +T L G+ + A+ +G
Sbjct: 232 RAATHVFAR----LGAESLFKSFTLTANGVMTRNECVIELLGDDAVAHVAGAAMGDGDFH 287
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D + H A+ SR V K + + ++GK+ V GA + + +LL+ +
Sbjct: 288 QDDTVFVTHDAQRCESRQVFKKVLRNGATGVFQGKILVKPGAQKTDGYQISQALLLDEDS 347
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H +T+ I ++ L+Y RGIP A L+ F+ E ++++
Sbjct: 348 QFLAKPELEIYADDVACSHGSTSGAIDEDALYYLRARGIPRPIATDLLTLSFLAEAVEEI 407
Query: 469 PMEFAVE-AQKLIDISLE 485
E E + LE
Sbjct: 408 EDEGLREDINSQLAAWLE 425
>gi|158334401|ref|YP_001515573.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
gi|158304642|gb|ABW26259.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
Length = 434
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 85/435 (19%), Positives = 157/435 (36%), Gaps = 39/435 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P + + R A PS R F DL
Sbjct: 34 PQGLEKVREGALSIVQERGLPS---NRDEDWRFTDLSGLYK-------------TAFTAP 77
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T L + + ILA V V+ F + +G+ +++A P
Sbjct: 78 TAASLSLEEIDAFILAEAPVRLVFVNGWFAPDLSTI----DHLPAGLSVSTLADA-GNLP 132
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-TGQFE 229
+L ++ P + ALN+A F D + + I K + +
Sbjct: 133 ELGQQ------PGLSEVFTALNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPIITSP 186
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R L+IA+ S + +E A + +V+E+ NA++ + +Q
Sbjct: 187 RGLVIAEANSAATLIEEYAA-VNAASYFTNSVMEVSLGQNAQLHHHRIQREAKTAFH--- 242
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + S+ + T L G ++ P + EQ+ + ++ Q
Sbjct: 243 -----IGTTSVSQDRDSRYALTSLSLGGQMSRHNPVVVPTAEQTDTTLNGLTLAVDQQVA 297
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D+ + + + T++ + K I + + G+V V + A + +LL+ +
Sbjct: 298 DTHSDLSFTGPHCTAQQLHKCIVDNRARAVFNGRVFVPKLAQQTNASQLSRNLLLSSKAR 357
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P +E H AT S++ DE +FY RG+ +A L+V GF E++ +LP
Sbjct: 358 VDTKPQLEIIADDVKCAHGATVSQLDDEEVFYLQSRGLDRNSACDLLVEGFAAEIIDQLP 417
Query: 470 MEFAVEAQKLIDISL 484
+ A + Q L++ L
Sbjct: 418 I--AEQRQTLLNAVL 430
>gi|309800120|ref|ZP_07694312.1| FeS assembly protein SufD [Streptococcus infantis SK1302]
gi|308116261|gb|EFO53745.1| FeS assembly protein SufD [Streptococcus infantis SK1302]
Length = 305
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 128/310 (41%), Gaps = 11/310 (3%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE-RTLIIAD 236
+ V D+ AA ++A F G+ +YIP V + F + F +IIA
Sbjct: 1 MSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEIAEPIEGIFYQDSDSDVPFNKHIMIIAG 60
Query: 237 EGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+ S +SYLE + + VE++A A++K+S + + ++
Sbjct: 61 KNSKISYLERLESRGEGSAKATANITVEVIARSGAQVKFSAIDRLGE-------NVTAYI 113
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
++RG G + I W L G S + +A+S+G Q T++
Sbjct: 114 SRRGK-LGNDASIDWAIGVMNEGNVVADFDSDLLGNGSHADLKVVALSSGRQVQGIDTRV 172
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+ N+ I+ G+ + T+ G + +GA + + L++ + + P
Sbjct: 173 TNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPI 232
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAV 474
+ + H A+ ++ E ++Y + RG+ + A L+V GF+ V+ ++P+ E
Sbjct: 233 LLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRD 292
Query: 475 EAQKLIDISL 484
E I+ L
Sbjct: 293 EMIATIEEKL 302
>gi|297620331|ref|YP_003708468.1| FeS assembly protein SufD [Waddlia chondrophila WSU 86-1044]
gi|297375632|gb|ADI37462.1| FeS assembly protein SufD [Waddlia chondrophila WSU 86-1044]
Length = 421
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 81/424 (19%), Positives = 153/424 (36%), Gaps = 30/424 (7%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A+ R+ + P + + +I L +L + E L
Sbjct: 24 IRQKAWDRFQAVGLPQKNQEVWRSIKLRKL--------FEKSLTLPSLGTRSREEIETLI 75
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+P ++ L V ++ D T E +I + A + +K
Sbjct: 76 LPGFKKRCL-------VMINGQLDLELSST----EDLGGRLIVSHLERAAKSYGGFLKPA 124
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-ERTLIIA 235
+ + +A LNSA+ G+FVY+P + + + + R + A
Sbjct: 125 WMQAIKEETDPFAVLNSALGAKGAFVYLPPNAIIEKPVQILSVHSSETSSLVQPRLHLFA 184
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+GS ++ + T + A EL +NA++ + + P +
Sbjct: 185 GKGSRITLVS--TPHVFSSGSVCNASFELSIDENADVSLYQLNHRMPEAH------WQLE 236
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
T R + S+ + L GS +L GE + + G ++ + +
Sbjct: 237 TTRSFLK-RDSRFTAVNLTNGSETVRSDYKAVLTGENGEVNLSGLWMLQGNREAHTNILI 295
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A + S + KG+ S +++ GK+ V + A + F ++LL+ A + P
Sbjct: 296 DHQAPHCRSNQLFKGVLDDASRSSFEGKIYVRQAAQKTDAFQLNNNLLLSEKANAFSKPN 355
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV- 474
+E H AT ++ E LFY RG +E A ++ GF E++ ++
Sbjct: 356 LEIFADDVKASHGATVGQLDKEQLFYLKSRGYSQEMAQKTMIKGFYLEIIDQIKDSVVRD 415
Query: 475 EAQK 478
E K
Sbjct: 416 EITK 419
>gi|154706072|ref|YP_001424793.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164685980|ref|ZP_01947350.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165924043|ref|ZP_02219875.1| FeS assembly protein SufD [Coxiella burnetii RSA 334]
gi|212218764|ref|YP_002305551.1| SufD [Coxiella burnetii CbuK_Q154]
gi|154355358|gb|ABS76820.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164601505|gb|EAX32026.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165916502|gb|EDR35106.1| FeS assembly protein SufD [Coxiella burnetii RSA 334]
gi|212013026|gb|ACJ20406.1| SufD [Coxiella burnetii CbuK_Q154]
Length = 426
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 150/431 (34%), Gaps = 41/431 (9%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
W+ + +L P + + ++ A G + D+ +L +L
Sbjct: 22 WQKEQLKTFLLHGFP---HRKVENWKYTNVTPIAEQAFSFGENTDADIADFILPDAYRLV 78
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ G +++ + S +T+ K + + AI +
Sbjct: 79 -------FINGHFAPRLSDLSGLPSAVQMTSLKNIQRD-----IQNELAIKKDYQ----- 121
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLII 234
++ +N A+F DG F+ +PK + T R +I+
Sbjct: 122 ---------TAFSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVIL 172
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+E + E + V ++ A ++ +Q +
Sbjct: 173 LEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIH- 230
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ S+++ + GS ++ + L + + N +D+ T+
Sbjct: 231 -------QNRHSQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTR 283
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + TS+ KGI A S + GK+ V A + +L++ ++ T P
Sbjct: 284 IDHRVSHCTSQQNYKGILADKSRAVFNGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKP 343
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FA 473
+E N H AT ++++E +FY RGI AA L+ F EV++ LP + A
Sbjct: 344 ELEIYNDDVKCTHGATVGQLNEEAIFYLQSRGINRGAAEHLLTCAFANEVVEMLPNKVIA 403
Query: 474 VEAQKLIDISL 484
Q+L+ L
Sbjct: 404 DRIQQLVTDRL 414
>gi|146340501|ref|YP_001205549.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
gi|146193307|emb|CAL77323.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS278]
Length = 440
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/421 (17%), Positives = 150/421 (35%), Gaps = 28/421 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A+ + P R + DL + +
Sbjct: 33 EIRREAFAAFERTGLP---HRRIEEWKYTDLRALVREVLPLAGAPDAAALARAKAAIAPI 89
Query: 116 GIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
I + +L GV ++++ A + V T + L + +EAI +
Sbjct: 90 SIDGAAKLVLVDGVVAAELSDLAALPAGVGVRTLRAVLDE------ASNEAIGDL----- 138
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
++ + +LN+A+ TDG V + G + L ++ R+ +
Sbjct: 139 -----LLTKVSDPMLSLNAALATDGVVVTVADGAQLTEPLHLIHVATASKAARYSRSHVK 193
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ + +E A + + D A++ + + ++
Sbjct: 194 VGQGARATLVETSIAAEGVAAYQANDAAVIWVGDGAQLSHIRLMRDAADAVNVSSELFT- 252
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G +SK+S + +G A++ L GE S + + Q D
Sbjct: 253 -------VGAKSKLSLFNMTSGGAVSRLQAFFTLAGEASELIVNGVNLLRDKQHGDMTLV 305
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H TSR + + +++ ++G++ V + A + +LL+ + A + P
Sbjct: 306 VDHAVPGCTSRENFRAVLDDRAHSVFQGRIIVRQDAQQTDGKMMTRALLLSDEAEADSKP 365
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E + H AT + + LFY RG+PE+ A AL++ FV E ++ + +
Sbjct: 366 ELEIFADDVSCGHGATAGALDESLLFYLRARGLPEKQAQALLIQAFVGEAIEAIEDDALR 425
Query: 475 E 475
E
Sbjct: 426 E 426
>gi|218679492|ref|ZP_03527389.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
CIAT 894]
Length = 168
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 136/168 (80%), Positives = 154/168 (91%)
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
KYPSC+LRG+ S GEFYSIA+SNG QQIDSGTKM+HL KNT+SRIVSKGI+AG SNNTYR
Sbjct: 1 KYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGVSNNTYR 60
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G+VS HR A+++RNFTQCDSLLIG+ CGAHT+PYIE+KNS+ EHEATTSKIS++ LFY
Sbjct: 61 GQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFY 120
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
CLQRGIP EAAIALIVNGFV+EVLQ+LPMEFAVEAQKLI ISLEGSVG
Sbjct: 121 CLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLISISLEGSVG 168
>gi|218264752|ref|ZP_03478464.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
gi|218221801|gb|EEC94451.1| hypothetical protein PRABACTJOHN_04173 [Parabacteroides johnsonii
DSM 18315]
Length = 450
Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats.
Identities = 87/454 (19%), Positives = 158/454 (34%), Gaps = 34/454 (7%)
Query: 38 EDIIRF-ISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
ED+IR S +N P R A + P+ Y + D+ AP V
Sbjct: 18 EDLIRRHASGVQNAP------RTQALADLERLGFPTVKSEDY---KYTDVAQAFAPDYGV 68
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
LD IP+ ++ V ++ V + +
Sbjct: 69 NINRLD--------------IPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKMLPKAHLPE 114
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV + + ++P++ +Y P G + ALN+ + DG VY+P+GV +
Sbjct: 115 GVYAGGMRTFMEKYPEVASRYYGKAAPTGKDGIVALNTMLAQDGFVVYVPEGVVVERPIQ 174
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
R +++ E + L C D L VVE+ A + A Y
Sbjct: 175 LVNIFRSDVDTMANRRILVIMEARSEAKLLVCDHSIDDVKFLATQVVEIFAGEGAFFDYY 234
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
D + + S + + + +T L GEQ+
Sbjct: 235 --------DLEESSVSTTRFASVHVKQEAGSNVLVNGITLNNGLTRNNYYIELNGEQAEA 286
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
++I + QQ+D+ + + H TS + K + + + G++ V A +
Sbjct: 287 TLCGMSILDKEQQLDTYSHITHAVPYCTSNELFKNVLDDHAVGAFSGRILVKEDAQKTAA 346
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ +L ++ P +E H TT ++ + LFY RGIP + A L
Sbjct: 347 YQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARML 406
Query: 456 IVNGFVREVLQKLPME-FAVEAQKLIDISLEGSV 488
+ F +V+ + ++ KL++ G +
Sbjct: 407 LSVAFTSDVIDYVRLDALKDRLHKLVEKRFRGEL 440
>gi|282879388|ref|ZP_06288131.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
gi|281298501|gb|EFA90927.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
Length = 447
Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 170/438 (38%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M + R A+ + PS RY D L +P
Sbjct: 27 MNDVRDAAFEDFKRQGFPSRKVERYRYTDMAAL-----------------FEPNYGLNLN 69
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+L IP++ E V ++ + + + GVI + + HP L
Sbjct: 70 RLDIPVKPYEAFKCSVPNLSTSLYFIVNDAFHAKALPKATLPEGVIVDSLQKVANTHPQL 129
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT- 231
V KY + + D+ ALN+ + DG F+Y+PK V+ + + R
Sbjct: 130 VSKYYAQLAETKDDAITALNTMLAQDGLFIYVPKRVKIDRAVQVVNLLRSDVDLMVNRRV 189
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ DEG+ +L C D++ L V+E +NA + ++ + +++ +
Sbjct: 190 LIVLDEGAEAKFLF-CDHTMDDKHFLATQVIEAYVGENASLDLYCMEETHEHNTRVS-NV 247
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
Y + S + L + IT + + RGE + I++ Q +D+
Sbjct: 248 Y-------VEQQANSHFNHNVLTLHNGITRNQLNLVFRGEGASCCCNGCVIADKKQHVDN 300
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + S + K + G + + G+V V +GA + + + +L +
Sbjct: 301 NTFIRHAVPHCESHELYKYVLDGQATGAFAGRVLVEKGAQKTNSEMRNQNLCTTKQARMY 360
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H +T +++D+ +FY QRGI E+ A L+ F+ EV+ + +E
Sbjct: 361 TQPELEIYADDVKCGHGSTVGQLNDQAMFYMRQRGISEQEAKLLLEFAFINEVVDSMQLE 420
Query: 472 -FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 421 PLKDRLHYLVEKRFRGEL 438
>gi|297619180|ref|YP_003707285.1| SufBD protein [Methanococcus voltae A3]
gi|297378157|gb|ADI36312.1| SufBD protein [Methanococcus voltae A3]
Length = 416
Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats.
Identities = 94/411 (22%), Positives = 181/411 (44%), Gaps = 29/411 (7%)
Query: 79 PAIDFDDLYYYAAPK-SIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
I+ DD Y PK + +SL D++ + K+GI I E+
Sbjct: 34 DDINLDD---YPTPKNTNRAVESLTDIEEDEKEALSKVGIDINEKN--------TSGSYL 82
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
++ + + + + MPI+EA+ +H + +Y VV + D + A + + +
Sbjct: 83 QVNNEPIYSKMYK-----NIEIMPITEALEKHD--LSEYYWNVVEIKDKYSARVEN-ELS 134
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
G F+Y PKGV+ + L T I ++ Q +I+ DEG+ ++ + GCT ++ L
Sbjct: 135 QGYFIYAPKGVKESIPLQTCLLIGKEDVSQNVHNIIVVDEGAELNVITGCTTSPHVKSGL 194
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H V E ++ Y+ V NW ++ I+
Sbjct: 195 HLGVSEFYVKKGGKLTYTMVHNWGE-------NVHVRPRTGIRLDEDAVFINNYVTTMPV 247
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
YP+ G+ S F +I G + D G++++ K +++ ++S+ I+ S
Sbjct: 248 KSMQSYPTAYCDGDNSKATFQTIVYGTGKSKYDMGSRVVLNGKGSSADMISRVIAVDESE 307
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
RG + + +C L++ + +P +E+ + +L HEA KI+++
Sbjct: 308 VISRGHLVGAEK--GVKGHLECRGLILSKDARILAVPELEATETDLDLSHEAAVGKIAED 365
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L Y + RG+ E+ A +LI+ GF+ + LP E A ++++D++LE ++
Sbjct: 366 QLIYLMSRGLTEDEATSLIIKGFLSVDINGLPEELAKNVKEMMDMTLENAM 416
>gi|218441630|ref|YP_002379959.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
gi|218174358|gb|ACK73091.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
Length = 454
Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats.
Identities = 79/431 (18%), Positives = 156/431 (36%), Gaps = 42/431 (9%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL- 108
E D++ + R A P+ + F D+ + EL
Sbjct: 29 EADFIQQLRHQAGMTVSQSSLPT---KKDEEWRFTDIS------QLQQHHFQVATPVELT 79
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
L + + +P + IL V + + GV ++
Sbjct: 80 LNSIDSFILPETDNSILVFVNGFYSPELSNISGLP-----------QGVKIGNLATL--- 125
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
P+ + YL P F+ A N+ TD + +++ + + F E T
Sbjct: 126 SPEKIAPYLGQ-QPGQTEFFTAFNTVGLTDVAVIWVDAEITVERPVELLFLTVEPQTPIV 184
Query: 229 --ERTLIIADEGSYVSYLEGCTAPQRDEN-------QLHAAVVELVALDNAEIKYSTVQN 279
R L++A++ S + +E + + +V E+ +NA+I ++ +Q
Sbjct: 185 IQPRVLVVAEKNSSLQLVEYYNVLTENCSGSSGKSSYFTNSVTEIWLQENAQINHTRIQQ 244
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
+ K + S+ + ++ GS +GEQ+
Sbjct: 245 ESGKSFH--------IGKTAIAQARDSRYTCNEISIGSQFYRHNLEIFQQGEQTQTNLNG 296
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+ IS Q D+ + + T+ + K I ++ + GKV V + A +
Sbjct: 297 LIISADHQVADTHSAIYLNYPYGTTDQLHKCIIDDSAHAIFNGKVFVPKPAQLTNAAQLN 356
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+LLI +T P ++ + H AT S++ + LFY RG+ EE A L+++
Sbjct: 357 RNLLISPKARVNTKPELQITADNVKCSHGATVSQLEADELFYLRSRGLTEENARYLLIDA 416
Query: 460 FVREVLQKLPM 470
F E+++++P+
Sbjct: 417 FATEIIERIPL 427
>gi|327404072|ref|YP_004344910.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
gi|327319580|gb|AEA44072.1| FeS assembly protein SufD [Fluviicola taffensis DSM 16823]
Length = 422
Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/412 (18%), Positives = 147/412 (35%), Gaps = 37/412 (8%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A P+ R A + + ++ E T
Sbjct: 26 LRQKALEILEQTAFPT---TRTEAWKYTRVA---------KIKNSTLSVQENPITVNGYF 73
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
L V V+ F + +F + GV +P + + +
Sbjct: 74 -------GLEENSIQYVFVNGHFSAELSSKSFPD-----GVKILP----LSQMDEAEVLV 117
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
L V + ++++N+A TDG +V++ ++ + K R +++A+
Sbjct: 118 LGRNVGLDGEIFSSINTAYVTDGLYVHVSAKMQIEPTIEIIQINTGKNILTNLRHVLVAE 177
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
S V ++ + EN + E+ NA Y T+ D V
Sbjct: 178 AFSKVQLIQRSLSVNGTEN-FTNVISEIHVGKNA---YVTIDKLQEEDESCSQISTELVN 233
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + + A+ + + G+ I NG Q +D+ T +
Sbjct: 234 QH-----QDSNFTINTVTLNGALVRNNLTIEVDGQNCETHLNGAYILNGNQHVDNHTIVD 288
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N S + KG+ G + + GKV V + A F ++L+ N+ ++ P +
Sbjct: 289 HKVANCESFELYKGVIDGKATAVFNGKVYVRKDAQKINAFQSNGNVLLSNDATVNSKPEL 348
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H +TT ++ +E +FY RG+ E +A L+V F+ +V+QK+
Sbjct: 349 EIYADDVKCSHGSTTGQLDEEAVFYLRARGLSEASARQLMVGAFIEDVIQKI 400
>gi|311695877|gb|ADP98750.1| FeS assembly protein SufD [marine bacterium HP15]
Length = 428
Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats.
Identities = 82/429 (19%), Positives = 152/429 (35%), Gaps = 41/429 (9%)
Query: 51 PDWMLEWRLL---AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPE 107
P+ +L R A + M P+ + + Y + D
Sbjct: 20 PEPLLALRKQRGTAL---VDMPLPT---RKTENWKYS--SKYLKLTDDMAISLPADG--- 68
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+T L +P + L GV + D G+ +
Sbjct: 69 --KTGSGLAVPGYKVAFLNGVMMPEACEYPDLD---------------GISIKSFGDLSD 111
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E + L + + A LNSA F DG + + L + + +G
Sbjct: 112 EEASDLADRLDSTLDNKAVQMARLNSARFEDGLLIRLKPDAVLDQPLFIVHEVTAEASGS 171
Query: 228 -FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
F R + A S ++ +E + + V E D A I ++++ G++
Sbjct: 172 AFPRIFVDAGRHSQITLVEEYISSG-SAQVMVNTVTEFNVADGANI--TSIRLNMEGENV 228
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
G + +R S+ + G + L GE + + + ++ G
Sbjct: 229 QHIGSTGVLQQR------SSRFESHTVGFGGPLRRHDLQVRLEGEGAECKLNGVVVTQGK 282
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q D+ T + H+A + S + I+A S+ + G++ +H+ A S +LL+ N
Sbjct: 283 QHYDNHTTIEHVAAHCNSEETYRNIAADQSHAVFNGRIHIHQDAQKSNADMNNKNLLLSN 342
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H AT ++ + LFY + RGI A L+ F+ E+++
Sbjct: 343 GAEIDTKPELEIYADDVKCAHGATIGQLDEISLFYLVSRGIGRRQANVLLTMAFINELVE 402
Query: 467 KLPMEFAVE 475
++P+E E
Sbjct: 403 QIPVEAVRE 411
>gi|254451130|ref|ZP_05064567.1| FeS assembly protein SufD, putative [Octadecabacter antarcticus
238]
gi|198265536|gb|EDY89806.1| FeS assembly protein SufD, putative [Octadecabacter antarcticus
238]
Length = 433
Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats.
Identities = 88/429 (20%), Positives = 151/429 (35%), Gaps = 44/429 (10%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W+ E R A R TM P R F + P + +D P L
Sbjct: 29 AWITEARTAAVNRVKTMGLP---HGRDEYWKFTKPDSFVQPVAPKAALFDNDEGP-LWDD 84
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
++L I V VD VFD+V+ ++ G++ + A +
Sbjct: 85 TDRLKI---------------VFVDGVFDAVA-----SDDFSGEGLVIERLCNAASKDIH 124
Query: 172 LVKKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
K AALN+A TDG +++ + ++ + +
Sbjct: 125 WAKDLYGVLEIRGQDAVQRPLAALNTAFATDGVLIHVTG--KVTRPVNLIYLHKSDSSDV 182
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
I ++G+ ++ LE R V+E+ D A + VQ G
Sbjct: 183 ILHHCIKIEDGAEITLLETGPGAARL-----NTVMEVEVADKAAFHHVRVQ----GRDHE 233
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-F 346
+ + T+ G S L +T L G+ + + +G
Sbjct: 234 RRAVTGMFTR----LGHESAFKSFTLTMNGVLTRNECVIELTGDNAIAHVAGACVGDGKD 289
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
D + H + N SR V K + + ++GK+ V +GA + + +LL+ +
Sbjct: 290 FHQDDTVFITHDSLNCESRQVFKKVLRNGATGVFQGKILVKKGAQKTDGYQISQALLLDD 349
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ P +E H +TT I ++ LFY RG+P+ A L+V F+ E LQ
Sbjct: 350 DSQFLAKPELEIYADDVACSHGSTTGAIDEDSLFYLQSRGVPKAQATDLLVLAFLAEALQ 409
Query: 467 KLPMEFAVE 475
++ E
Sbjct: 410 EIENSTLAE 418
>gi|91976930|ref|YP_569589.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
gi|91683386|gb|ABE39688.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
Length = 437
Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats.
Identities = 74/422 (17%), Positives = 144/422 (34%), Gaps = 31/422 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A+ + + P R + DL V P +
Sbjct: 33 DARREAFDEFQRIGLP---HRRIEEWKYTDLRALMREVLPVAPTPDAAALARAEAAVKLH 89
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
I + +L + D ++G+ + EA+ D +
Sbjct: 90 AIDGVRRLVLVDGALAVALSDL-------------SALEAGLSIRSLREALDAGDDRLLS 136
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLII 234
N ALN+A+ TDG + I G + L + + F R+L+
Sbjct: 137 L------DTGNPMTALNTALMTDGVVIDIADGAKLAKPLHIVHIASGGAPSAMFTRSLVS 190
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ S + +E A + + D A + + + + +N
Sbjct: 191 LGKESAATVVESFVAGEGAGVYQVHDTAVMTVGDRARLDHVRL-------IEDSRDAFNI 243
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G + S + TG+ ++ + GE + E + + NG Q D+
Sbjct: 244 ASA-EVRVGAHAHYSVAGVTTGALVSRYQLVVNIAGEYARVETNGVNLLNGKQHADTTLV 302
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M H + SR + + ++ ++G+++V + A + +LL+ + A P
Sbjct: 303 MNHDVPHCVSREGFRAVVDDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSDEAEADNKP 362
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H A + D+ LFY RG+ E+ A AL++ FV E ++ + +
Sbjct: 363 ELEIFADDVTCGHGAAIGALDDQLLFYLRARGLAEKEAEALLIQAFVGEAIEAIADDNLR 422
Query: 475 EA 476
E
Sbjct: 423 EL 424
>gi|120556063|ref|YP_960414.1| FeS assembly protein SufD [Marinobacter aquaeolei VT8]
gi|120325912|gb|ABM20227.1| Iron-regulated ABC transporter permease protein SufD [Marinobacter
aquaeolei VT8]
Length = 428
Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats.
Identities = 80/426 (18%), Positives = 159/426 (37%), Gaps = 35/426 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P+ +L R + M P+ + + K + + P +
Sbjct: 20 PEPLLALRKERASALVDMPLPT---RKTENWKYS-------SKYLKLADDMAISLPAEGK 69
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T L +P + + GV + + D G+ + ++ +
Sbjct: 70 TGNSLAVPGYKVVFINGVMIPEASEYPDLD---------------GIEILSFNDLANDEA 114
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-FE 229
+ + L + + +A LN A F DG F+ + G L + +G +
Sbjct: 115 EALSAKLGSTLNHDQAQFARLNGARFEDGLFIRLKPGAVLDQPLFIIHETSADASGSAYP 174
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R + A S ++ +E T+ L + V E D A + ++++ G++
Sbjct: 175 RIYVEAGANSQLTLVEEYTSSGEASA-LVSTVTEFNLADGANV--TSIRLNMEGENVQHI 231
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
G + +R S+ + G + L GE + + + ++ G Q
Sbjct: 232 GATGVLQQR------SSRFESHCVGFGGPLRRHDLQVRLEGEGAETKLNGVVVTQGKQHY 285
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D+ T + H+A + S + I+A S+ + G++ +H+ A S +LL+ N
Sbjct: 286 DNHTSIDHVAAHCNSEETYRNIAADQSHAVFNGRIHIHQDAQKSNADMNNKNLLLSNGAE 345
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P +E H AT ++ + +FY + RGI A L+ F+ E++Q++P
Sbjct: 346 IDTKPELEIYADDVKCAHGATIGQLDETSVFYLVSRGIGRRQANVLLTMAFINELVQQIP 405
Query: 470 MEFAVE 475
+E E
Sbjct: 406 VEAVRE 411
>gi|116514678|ref|YP_813584.1| Fe-S cluster assembly ABC-type transport system, permease
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093993|gb|ABJ59146.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325125655|gb|ADY84985.1| ABC transporter component (putative) [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 387
Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats.
Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 10/335 (2%)
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
E G + A+ EH DL++KY +N N A G F+Y+P V
Sbjct: 55 EFWAKGCVACDWETALAEHGDLLEKYFGRAANFKENRLLGENVAKMEQGLFIYVPDNVAL 114
Query: 211 PMELSTYFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
L+ + + + F L++A + + SY E + E VVE+ AL
Sbjct: 115 AEPLTVTYLQDSQKQEDFALHVLLVAGKNAAFSYFEKVASRGDKEA-TANLVVEICALAG 173
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+++KY+ + ++ KR G +K+ W L
Sbjct: 174 SQVKYAAIDRLGK-------NTTAYL-KRVAWVGRDAKLDWAMGMLSDGKILADYDSDLY 225
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ + E IAI+ G Q T + + K + RI+ G+ S + G V +G
Sbjct: 226 GQGARAEMNVIAITIGDQVQGLNTVVNNYGKKSDGRILQHGVILQKSCLVFNGIGHVMKG 285
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A + + L++ + P + ++ H A+ ++ D+ L+Y + RG+P+
Sbjct: 286 AKGANAQQENRVLMLSRSARGDANPILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPK 345
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
A L++ GF+ VL K+P ++++ L
Sbjct: 346 PLAERLVIRGFLGPVLTKIPEASRQPLFEMVERKL 380
>gi|104774556|ref|YP_619536.1| hypothetical protein Ldb1820 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423637|emb|CAI98589.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
Length = 378
Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats.
Identities = 75/335 (22%), Positives = 134/335 (40%), Gaps = 10/335 (2%)
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
E G + A+ EH DL++KY +N N A G FVY+P V
Sbjct: 46 EFWAKGCVACDWETALAEHGDLLEKYFGRAANFKENRLLGENVAKMEQGLFVYVPDNVAL 105
Query: 211 PMELSTYFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
L+ + + + F L++A + + SY E + E VVE+ AL
Sbjct: 106 AEPLTVTYLQDSQKQEDFALHVLLVAGKNAAFSYFEKVASRGDKEA-TANLVVEICALAG 164
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+++KY+ + ++ KR G +K+ W L
Sbjct: 165 SQVKYAAIDRLGK-------NTTAYL-KRVAWVGRDAKLDWAMGMLSDGKILADYDSDLY 216
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ + E IAI+ G Q T + + K + RI+ G+ S + G V +G
Sbjct: 217 GQGARAEMNVIAITIGDQVQGLNTVVNNYGKKSDGRILQHGVILQKSCLVFNGIGHVMKG 276
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A + + L++ + P + ++ H A+ ++ D+ L+Y + RG+P+
Sbjct: 277 AKGANAQQENRVLMLSRSARGDANPILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPK 336
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
A L++ GF+ VL K+P ++++ L
Sbjct: 337 PLAERLVIRGFLGPVLTKIPEASRQPLFEMVERKL 371
>gi|158422670|ref|YP_001523962.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158329559|dbj|BAF87044.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 444
Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats.
Identities = 86/420 (20%), Positives = 152/420 (36%), Gaps = 27/420 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL A+ + + P R A + DL D + L
Sbjct: 37 RLAAFEAFNRVGLP---HRRVEAWKYTDLRRLMR-------------DAKPLAPLPDAAA 80
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
A + + V D + G+ P++E E L+ L
Sbjct: 81 KAEAASAGALLAGLGLRRLVVVDGSLAPELSDLADLEPGLTIRPMAEVFGEDGPLLPDSL 140
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTLIIAD 236
+P + A LN+A DG F+ + G + F + F R+ ++
Sbjct: 141 RDALPDVEPALA-LNAAFARDGVFIGVAPGAVVTRPIHVAFITTGDAPQAVFSRSRVVLG 199
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ ++ +E A E+Q++ A+ L+ D A++ + V G+G V
Sbjct: 200 AEAQLALVETHEAKAGVEHQVNVAL-GLLVGDKAQLDHVKV--------TGEGSAVLHVG 250
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G +++ G A L GE + ++ G Q D+ +
Sbjct: 251 SLVASVGAQARFGSCGFTLGGATVRNQLYVRLVGETTELNLAGASLLCGKQHADTALFLT 310
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A +TSR V K + + ++G+++V + A + +LL+ A++ P +
Sbjct: 311 HAAPGSTSREVFKAVVDDKAEAAFQGRITVEQAAQQTDARMMSRALLLSEEAEAYSKPEL 370
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H AT + ++ FY RGIP + A AL++ F+ EVL + E EA
Sbjct: 371 EIFADDVQCGHGATVGTLDEQLKFYLKARGIPAKEAEALLIQAFIGEVLDGIAHEGVREA 430
>gi|86608871|ref|YP_477633.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557413|gb|ABD02370.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 430
Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats.
Identities = 80/433 (18%), Positives = 152/433 (35%), Gaps = 41/433 (9%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + P+ + DL A K + +D L +
Sbjct: 34 LRQQARAQLAELGIPTPREED---WKYSDLSPLLAHKFRLAAAGDPSLDAATLEPW---- 86
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E V + + D + T + +P+++A +L++
Sbjct: 87 -LWPETSYSRAVFVNGYFAPQLSDLSGLPTALQ---------VIPLAQA---PGELLQTL 133
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF---ERTLI 233
T + + ALN+A DG + + G P L F R L+
Sbjct: 134 AKT------DVFTALNTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAVLAQPRCLL 187
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
S ++ +E + AV E+ + + + + +Q
Sbjct: 188 SLQAHSSLTLIEDHVSLGSGIPFG-NAVTEIALAEGSRLHHVILQRQGSPAFH------- 239
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + + S ++ GS + G Q+ + + + G Q D+ +
Sbjct: 240 -INQTAVRQSRNSHYRLQSIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHS 298
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++H A + +SR + K I ++ + G++ V R A + +LL+G T
Sbjct: 299 RLVHQAPHGSSRQLHKCIVDETAHAVFSGRILVSREAQLTDAAQTNRNLLLGPKARVDTQ 358
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E + H AT S++ E +FY RGIP+ A L+ F EVL+ +P+
Sbjct: 359 PQLEIFADNVKCAHGATVSQLEAEEIFYLQSRGIPQADARQLLTCAFAAEVLEGIPL--- 415
Query: 474 VEAQKLIDISLEG 486
+ L+ L G
Sbjct: 416 AQLPALVARQLAG 428
>gi|134045462|ref|YP_001096948.1| SufBD protein [Methanococcus maripaludis C5]
gi|132663087|gb|ABO34733.1| SufBD protein [Methanococcus maripaludis C5]
Length = 396
Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats.
Identities = 89/405 (21%), Positives = 182/405 (44%), Gaps = 26/405 (6%)
Query: 85 DLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
DL Y PK + SL ++ + + +G+ I E+ + +S +
Sbjct: 17 DLSMYPTPKENLLKVDSLKELSDDHKKALANVGVDIEEKNTI--------GSYVQVNSDA 68
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
V + + +I MPI+EA+ + + Y + V + D + A + + T+G F+
Sbjct: 69 VYSKMYSD-----IIIMPITEALEKFE--LDDYYWSAVKMSDKYGARVAN-ELTEGYFIR 120
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
PKGV+ + L T I + Q +II ++G+ ++ + GCT ++ LH V E
Sbjct: 121 APKGVKKTIPLQTCLLIGSEEVSQNVHNIIIVEDGAELNLITGCTTSPHVKSGLHLGVSE 180
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NA++ ++ + NW ++ I+ Y
Sbjct: 181 IYIGKNAKLTFTMIHNWGE-------NVHVRPRTAVKMDDDSIFINNYVTMMPVKSIQSY 233
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
P+ G+ + F +I G ++D G++++ +N+ + ++S+ I + RG
Sbjct: 234 PTAYCEGKNAKATFQTIVYGKGDSKLDMGSRVILSGENSAADMISRVIVVDDAEVISRG- 292
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ +H + +C L++ N +P +E++ + L HEA KI+++ + Y +
Sbjct: 293 -HLVGAESHVKGHLECRGLILSNEGHILAVPELEAEKTDLELSHEAAVGKIAEDQIMYLM 351
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
RG+ E+ A +LI+ GF+ + LP E A ++++D++LE ++
Sbjct: 352 SRGLSEDEAASLIIKGFLSVDISGLPPELAKSVKEMMDMTLENAM 396
>gi|288801641|ref|ZP_06407083.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302344948|ref|YP_003813301.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
gi|288335683|gb|EFC74116.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302149228|gb|ADK95490.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
Length = 447
Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats.
Identities = 89/438 (20%), Positives = 167/438 (38%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A+ + P+ RY D L +P+
Sbjct: 26 LNEVRDKAFEDFRRQGFPTKKVERYKYTDMQKL-----------------FEPDYGLNLN 68
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+L IP+ + V ++ + + + + GVI ++ E P+L
Sbjct: 69 RLEIPVNPYDTFKCDVPNLSTSLYFIVNDQFYSKSLPKAKLNDGVIVDSLNHVATERPEL 128
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT- 231
V KY + + ALN+ + DG F+Y+PK V+ + + R
Sbjct: 129 VAKYYGRLANTEADAITALNTMLAQDGLFIYVPKNVQLERTIQVINILRSDVDLMVNRRV 188
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ +EG+ +L C D N L V+E NA ++ + ++ + + + +
Sbjct: 189 LIVLEEGAKAQFLF-CDHAADDRNFLATQVIEAYVGANANLELNCLEETHAKNVRVS-NV 246
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
Y + S+ S + + +T + +GE S I++ Q +D+
Sbjct: 247 Y-------IEQQRDSRASHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVIADKSQHVDN 299
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + TS + K + + + G+V V +GA + + +L
Sbjct: 300 NTLIDHQVPHCTSNELYKYVLDDNAVGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMF 359
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H +T +++D LFY QRGI ++ A L+ F+ EV+ K+ +E
Sbjct: 360 TQPMLEIYADDVQCNHGSTVGQLNDAALFYMQQRGIDKKEAKLLLEFAFINEVIDKMELE 419
Query: 472 -FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 420 PLRDRLHHLVEKRFRGEL 437
>gi|332881714|ref|ZP_08449362.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332680353|gb|EGJ53302.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 447
Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 165/437 (37%), Gaps = 27/437 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A+ + P+ + + D+ AP + ++
Sbjct: 26 MNALRDKAFEDFTRQGFPT---QKVERYKYTDVPAAFAPDYGLNLNRVE----------- 71
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ E V ++ V + + GV+ + +A ++PD V
Sbjct: 72 -FSVNPYEAFR-CDVPNLSTSLYFVVNDAFYRKSLPAAALPEGVVVCSLKQAAEDYPDRV 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-L 232
+ + ALN+ + DG F+Y+P+GV L + R L
Sbjct: 130 SACYGKLARTEKDAINALNTMLVQDGLFIYVPRGVVVERTLQVVNILRSDVDLMANRRVL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
++ +E + L C D N L VVE+ A +NA ++ ++ + + + +Y
Sbjct: 190 VVLEENAQARLLF-CDHAMDDRNFLTTQVVEVFAAENARLELYELEETHVKNRRFS-NMY 247
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ S ++ + + T +L GE + Y I++ Q++D+
Sbjct: 248 -------VRQQRGSVVNLYNITLHNGQTRNRTDLVLDGEGAESNLYGCVIADKEQRVDNN 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H A++ S + K + S + G++ V +GA H+ + + +L ++
Sbjct: 301 TLIDHRAEHCVSNQLYKYVMDERSVGAFAGRILVRQGAQHTISNERNANLCATKEARMYS 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME- 471
P +E H +T +++++ LFY QRGI E A L+ F EV+ + +E
Sbjct: 361 QPMLEIYADDVKCSHGSTVGQLNEQALFYMQQRGISREEAQMLLKFAFAGEVIDAISLEA 420
Query: 472 FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 421 LRDRLHHLVEKRFRGEL 437
>gi|330997786|ref|ZP_08321621.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
gi|329569674|gb|EGG51439.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
Length = 447
Score = 223 bits (567), Expect = 8e-56, Method: Composition-based stats.
Identities = 80/434 (18%), Positives = 162/434 (37%), Gaps = 27/434 (6%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A+ + P+ + + D+ AP + + + +
Sbjct: 29 LRDKAFEDFTRQGFPT---QKVERYKYTDVSAAFAPDYGLNLNRV-EFPVNPYEAFR--- 81
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
V ++ + + GV+ + +A ++PD V
Sbjct: 82 ---------CDVPNLSTSLYFMVNDSFYRKALPAAALPEGVVVCSLKQAAEDYPDRVSAC 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-LIIA 235
+ + ALN+ + DG F+Y+P+GV L + R L++
Sbjct: 133 YGKLARTEKDAINALNTMLVQDGLFIYVPRGVVVERTLQVVNILRSDVDLMANRRVLVVL 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+E + V L C D N L VVE+ A +N ++ ++ + + + +Y
Sbjct: 193 EENAQVRLLF-CDHAMDDRNFLTTQVVEVFAAENTRLELYELEETHVKNRRFS-NMY--- 247
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S ++ + + T +L GE + + I++ Q++D+ T +
Sbjct: 248 ----VRQQRGSVVNLYNITLHNGQTRNRTDLVLDGEGAESNLCGLVIADKEQRVDNNTLI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A + TS + K + S + G++ V +GA H+ + + +L ++ P
Sbjct: 304 DHRAGHCTSNQLYKYVMDERSVGAFAGRILVRQGAQHTVSNERNANLCATKEARMYSQPM 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H +T +++++ LFY QRGI E A L+ F EV+ + +E
Sbjct: 364 LEIYADDVKCSHGSTVGQLNEQALFYMQQRGISREEAQMLLKFAFAGEVIDAISLEALRD 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 RLHHLVEKRFRGEL 437
>gi|254460208|ref|ZP_05073624.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2083]
gi|206676797|gb|EDZ41284.1| FeS assembly protein SufD [Rhodobacteraceae bacterium HTCC2083]
Length = 426
Score = 223 bits (567), Expect = 8e-56, Method: Composition-based stats.
Identities = 89/436 (20%), Positives = 158/436 (36%), Gaps = 43/436 (9%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W R A R +M PS D+ + Y P ++V P++LD +L+T
Sbjct: 25 WSTAARKDALMRLRSMGLPS---------RRDEYWKYTRPDTLVQPKALD---AAVLQTD 72
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD- 171
E E+ + V A ++ ++L GV +++A +
Sbjct: 73 EVPVFDGLERLKIVFVDGVFSADES------------DDLVLEGVAIERLADATADIHWA 120
Query: 172 --LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
L + + AALN+A TDG +++ + +S +R +
Sbjct: 121 KGLYGVLENKGQNPVERPLAALNTAYATDGVLIHVTG--KPSKPISMIYRHISTSSDAIL 178
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
++ D+G+ V+ LE A R +E+ D A + Q G +
Sbjct: 179 HHIVKIDKGAEVTILENGPAAARF-----NKCMEIDVADTATFHHVRAQ----GRDHERR 229
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + G S L +T L G+ + A+ +G
Sbjct: 230 AATHMFAR----LGTESTFKSFTLTANGVMTRNECVIELTGDDAHATVAGAALGDGDFHH 285
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 286 DDTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKAGAQKTDGYQISQSLLLDEDSQ 345
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +E H +T+ I +E LFY RG+P A ++ F+ E ++++
Sbjct: 346 FLAKPELEIYADDVACSHGSTSGAIDEEALFYLRSRGVPVGEATDMLTLSFLAEAVEEIE 405
Query: 470 M-EFAVEAQKLIDISL 484
A E + + L
Sbjct: 406 DGALAEEINECLAAWL 421
>gi|85703162|ref|ZP_01034266.1| FeS assembly protein SufD [Roseovarius sp. 217]
gi|85672090|gb|EAQ26947.1| FeS assembly protein SufD [Roseovarius sp. 217]
Length = 429
Score = 223 bits (567), Expect = 8e-56, Method: Composition-based stats.
Identities = 85/456 (18%), Positives = 154/456 (33%), Gaps = 46/456 (10%)
Query: 38 EDIIRFISAKKNEPD---WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
+D++ + P+ W+ R A RR T+ P R F +
Sbjct: 8 QDVVEARLSALTLPEGGKWITTAREAALRRLRTLGLPD---RRDEYWKFTRPDTLVQANA 64
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+PE +L + V VD VFD + ++L
Sbjct: 65 PEAALLQGAEEPEGFDAVNRLKL---------------VFVDGVFDPKA-----SDDLAL 104
Query: 155 SGVIFMPISEAICEHPDLVKKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
GV +SEA + AA N+A +DG +++ R
Sbjct: 105 DGVRIERLSEAAKTDIHWARDLYGVLEERGQSPVPRSLAAFNTAFASDGMLIHVTG--RP 162
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
++ + K + +I + G+ ++ LE A R V+E+ D A
Sbjct: 163 SKAINLIYIHKSKTSDAVLHHVIKLETGAELTILESGPAAARL-----NKVMEVEIADEA 217
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
+ Q G + + + + +S + +T L G
Sbjct: 218 TFHHICTQ----GRDHERRAVTHLFAR----LAAQSTFKSFTMTANGKMTRNECVIELTG 269
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ + A+ +G D + H A SR V K + + ++GK+ V GA
Sbjct: 270 DDAVAHVAGAAMGDGDFHQDDTVFVTHDALRCESRQVFKKVLRKGATGVFQGKILVKPGA 329
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
+ + +LL+ + P +E H +T+ I ++ L+Y RGIP+
Sbjct: 330 QKTDGYQISQALLLDEDSQFLAKPELEIYADDVACSHGSTSGAIDEDALYYLRARGIPKS 389
Query: 451 AAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLE 485
A L+ F+ E ++++ E E + LE
Sbjct: 390 LATDLLTLSFLAEAVEEIEDETLREEINGQLAGWLE 425
>gi|312136989|ref|YP_004004326.1| sufbd protein [Methanothermus fervidus DSM 2088]
gi|311224708|gb|ADP77564.1| SufBD protein [Methanothermus fervidus DSM 2088]
Length = 411
Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats.
Identities = 101/439 (23%), Positives = 177/439 (40%), Gaps = 36/439 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + + A + + P + +D P +S++DV ++ T
Sbjct: 2 LRDIKKRA-EKAKDKESPYGPKTDLKKFLAED------PGEHERIESIEDVPKKVRDTLV 54
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
K+GI E+E AG + S S V M I A+ E D V
Sbjct: 55 KVGIDTSEKER-AGTYIQLDESEIYSVSPS-----------KSVEIMGIKSAL-EKYDWV 101
Query: 174 KKYLSTVVPVGDNFYAALNSAVFT------DGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
K Y+ V + Y + A+ G F+ G + L I ++ Q
Sbjct: 102 KDYMWKAVAPDTDKYT-AHVALKELEEEKYTGYFIRSLPGSKEIFPLQACLFIGDERIMQ 160
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+IIA+E S + + GC Q + LH + E NA+I ++ V NW
Sbjct: 161 TAHNIIIAEENSELHIITGCATGQDVNSALHIGISEFYVKKNAKITFTMVHNWAEQVEVR 220
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ I+ L + + YP+ G+ S F S+
Sbjct: 221 PRTG-------IVIGDNGTYINNYILTSPVRVIQSYPTAYCTGKNSKAIFQSVMAGKKNS 273
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D G++++ K +++ ++S+ +S S RG + + +C L++ ++
Sbjct: 274 LLDIGSRVILEGKESSANVISRAVSMDESKIYSRG--HLAGRIPGVKGHLECHGLILSDD 331
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
H IP +E + + HEA KI +E + Y + RG+ EE AI++IV GF+ ++
Sbjct: 332 SMIHAIPELEGSATDLEMSHEAAVGKIDEEKILYLMSRGLTEEEAISMIVRGFLSIDIKG 391
Query: 468 LPMEFAVEAQKLIDISLEG 486
LP E A E +K+ID+S++G
Sbjct: 392 LPPELAAETKKMIDMSVKG 410
>gi|217970310|ref|YP_002355544.1| FeS assembly protein SufD [Thauera sp. MZ1T]
gi|217507637|gb|ACK54648.1| FeS assembly protein SufD [Thauera sp. MZ1T]
Length = 454
Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/418 (19%), Positives = 156/418 (37%), Gaps = 17/418 (4%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYP--AIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
W++ R A R+ P+ R + ++ F A +++ + D+
Sbjct: 25 WLVRLREDAIDRFADEGWPTTRRENWRHTSLAFMAQQALAVRETVAPEAVVADLRARYRA 84
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
P R+ AG V D GV +++A+ + P
Sbjct: 85 ALGTAQDPARKAVESAGDDGHWV---VFVDGHFAPALSAIGGLPGGVRIGSLADALGQTP 141
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ V+ AALN+A+ DG+++ + +GV + F Q R
Sbjct: 142 EAVEAAFGQA--GDGEAPAALNAALAADGAWIRLGRGVAVEPPIHLVFL-TATVADQHLR 198
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
L++ + G+ + +E A + L AV ++A ++ + + +Q P
Sbjct: 199 NLVVTEPGAQATIVEHYPA-GAAGSTLTTAVTRVLAAQDSHVTHLKLQQEAPEAIH---- 253
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ + + + L G+ + L GE + + ++G + +D
Sbjct: 254 ----LATIEAEQARGAVFASHSLSFGARLARNDIRTRLAGEGAEVLLNGLYHADGRRHVD 309
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T++ H TSR +G+ G + + G++ V + A + +CD+LL+ A
Sbjct: 310 HHTRIDHARPQGTSREFYRGLIDGSARGVFTGRILVAQDAQRTDAMQRCDNLLLSRLAEA 369
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H AT ++ ++ LFY RG+ A L+ F EVL ++
Sbjct: 370 DARPELEIYADDVKCAHGATVGQLDEDALFYLRSRGVDAVHARQLLTYAFAAEVLDRI 427
>gi|300727479|ref|ZP_07060870.1| FeS assembly protein SufD [Prevotella bryantii B14]
gi|299775182|gb|EFI71783.1| FeS assembly protein SufD [Prevotella bryantii B14]
Length = 431
Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 172/448 (38%), Gaps = 31/448 (6%)
Query: 44 ISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDD 103
I EP + R A+ + PS RY + D L
Sbjct: 2 ICKHAAEP--LNAIRDKAFEDFKKQGFPSKKVERYKYTNMDKL----------------- 42
Query: 104 VDPELLRTYEKLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+P+ +L IP+ + V ++ V + + GVI +
Sbjct: 43 FEPDYGLNLNRLEIPVNPYDAFRCDVPNLSTSLYFVVNDAFYTKAQPKTTLPEGVIVASL 102
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
S P+LV KY ++ ALN+ + DG VY+PK V+ + +
Sbjct: 103 SHVAATCPELVAKYYGKQAKTEEDAITALNTMLAQDGLMVYVPKNVKIDRAVQVVNILRS 162
Query: 223 KGTGQFERT-LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
R LI+ +EG+ ++L C D N L V+E +NA+++ + ++ +
Sbjct: 163 DVDLMINRRVLIVLEEGAEATFLF-CDDSADDRNFLTTQVIEAFVGENAKLELNCLEETH 221
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
+++ +Y + S++ + + IT + +GE + A
Sbjct: 222 LKNTRVS-NVY-------IEQQANSRVYHNVITLHNGITRNKLDLVFKGEGAECYCNGCA 273
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
I + Q +D+ T + H + S + K + + + GKV V + A + + +
Sbjct: 274 IEDKNQHVDNNTLIDHQVPHCDSHELYKYVLDENAVGAFAGKVLVRKEAQKTTSQETNQN 333
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
L+ +T P +E H +T +++D +FY QRGI ++ A L+ F+
Sbjct: 334 LVATKTARMYTQPMLEIYADDVKCAHGSTVGQLNDAAMFYMQQRGIDQKEAKMLLEFAFI 393
Query: 462 REVLQKLPME-FAVEAQKLIDISLEGSV 488
EV+ ++ +E L+++ G +
Sbjct: 394 NEVIDQMTLEPLRDRLHHLVEMRFRGQL 421
>gi|258542736|ref|YP_003188169.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|256633814|dbj|BAH99789.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01]
gi|256636873|dbj|BAI02842.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-03]
gi|256639926|dbj|BAI05888.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-07]
gi|256642982|dbj|BAI08937.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-22]
gi|256646037|dbj|BAI11985.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-26]
gi|256649090|dbj|BAI15031.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-32]
gi|256652077|dbj|BAI18011.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655134|dbj|BAI21061.1| iron-sulfur (Fe-S) assembly protein SufD [Acetobacter pasteurianus
IFO 3283-12]
Length = 420
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 82/421 (19%), Positives = 141/421 (33%), Gaps = 40/421 (9%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A L P A + L +A + P D V + L
Sbjct: 20 RQAAIGALLRTGLPD---RHVEAWKYTSLRPLSAQEFQAPPAQYDAVQAKSL-------- 68
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK--KSGVIFMPISEAICEHPDLVKK 175
L + + AV A+ V V F ++L GV S+
Sbjct: 69 -------LDNLLSQHDAVQALPHIVFVNGRFVKDLSLLPEGVDVSFFSQN--------SL 113
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLII 234
+ ALN+A+ DG+ +++ KG L + R ++
Sbjct: 114 TSDVQASPDRDPLVALNTALVDDGAILHVAKGADAGRVLLISLGVAGDTAISFHPRHSVV 173
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+EG+++S L H V E+ ++A++ ++T+Q P
Sbjct: 174 LEEGAHLSLLS---LSAGVGPYFHNPVTEVTVGESAKLYHTTLQTEGPQAIA-------- 222
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + L GS ++ L + Q D +
Sbjct: 223 LATTYVQVAGHGVYNSFALGLGSLLSRHEVHARLNAPHAQLHVNGAQNLAEHQVGDITSV 282
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H A + SR + + G + ++GKV V + A + + +LL+ N P
Sbjct: 283 ITHAASDCISRQTVRNVLDGHARGVFQGKVLVEQVAQKTDGYQMNQALLLSENAEIDAKP 342
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + D+ LFY RG+PE A +++ F+ E L + E A
Sbjct: 343 ELEIYADDVRCSHGATVGALDDDQLFYMRSRGVPEAQARHILIAAFLDEALSLIEDETAQ 402
Query: 475 E 475
E
Sbjct: 403 E 403
>gi|154491950|ref|ZP_02031576.1| hypothetical protein PARMER_01580 [Parabacteroides merdae ATCC
43184]
gi|154088191|gb|EDN87236.1| hypothetical protein PARMER_01580 [Parabacteroides merdae ATCC
43184]
Length = 447
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 83/434 (19%), Positives = 150/434 (34%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + P+ Y + D+ AP V LD I
Sbjct: 30 RAEALADLERLGFPTVKSEDY---KYTDVAQAFAPDYGVNINRLD--------------I 72
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ ++ V ++ V + + GV + + ++P++ +Y
Sbjct: 73 PVNPYDVFRCDVPNLSTSLYFVVNDTFYDKMLPKAHLPEGVYAGGMRTFMEKYPEVASRY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIA 235
P G + ALN+ + DG VY+P+GV + T R L+I
Sbjct: 133 YGKAAPTGKDGIVALNTMLAQDGFVVYVPEGVVVERPIQLVNIFRSDVDTMANRRILVIM 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+ S L C D L VVE+ A + A Y D +
Sbjct: 193 EPRSEAKLLV-CDHSIDDVKFLATQVVEIFAGEGAFFDYY--------DLEESSMSTTRF 243
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S + + + +T L GEQ+ ++I + QQ+D+ + +
Sbjct: 244 ASVHVKQEAGSNVLVNGITLNNGLTRNNYYIELNGEQAEATLCGMSILDKEQQLDTYSHI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H TS + K + + + G++ V A + + +L ++ P
Sbjct: 304 THAVPYCTSNELFKNVLDDHAVGAFSGRILVKEDAQKTAAYQTNRNLCATREARMYSKPQ 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H TT ++ + LFY RGIP + A L+ F +V+ + ++
Sbjct: 364 LEIYADDVKCSHGMTTGQLDETALFYMQSRGIPRDEARMLLSVAFTADVIDYVRLDALKD 423
Query: 475 EAQKLIDISLEGSV 488
KL++ G +
Sbjct: 424 RLHKLVEKRFRGEL 437
>gi|332829537|gb|EGK02186.1| hypothetical protein HMPREF9455_01820 [Dysgonomonas gadei ATCC
BAA-286]
Length = 446
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/431 (18%), Positives = 159/431 (36%), Gaps = 27/431 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P+ Y +D V + + D L R +
Sbjct: 29 RDKAFEAFRKQGFPTKKLEDYLYLD-------------VAAEFMPDFGLNLNRVPFQGNP 75
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ + + + T+ V + + + GV + + E P++ KY
Sbjct: 76 YVAFRCEIPNMTTNLYFV---LNDLFHQEHSPQVEYPKGVFVGSLKQFAEEKPEVCSKYY 132
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ V +N A N+ DG +Y+PKGV + + + R LIIA+
Sbjct: 133 GQIADVNNNGIIAFNTMFAQDGLAIYVPKGVIVEEPIQLINILKSEFNYLVNRRILIIAE 192
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ + V L C + + L V E+ A NA + ++ +T
Sbjct: 193 DDAQVKLLI-CDHTVDESHFLATQVTEIYAGRNAVVDCYDLEENSDK--------VTRLT 243
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S + + + ++ + L GE + + I++ Q +D+ +
Sbjct: 244 NTFVLQEGSSNVLVNNMTLNTGVSRNNYNVKLNGEHAEAYVCGMVIADRQQYVDNFAFLD 303
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + TS + K + + ++ G++ V + A + + ++L I N + P +
Sbjct: 304 HAKPHCTSTQLFKYVLQDEAKGSFCGRILVEKDAQKTMAYQSNNNLCISPNAKMYAKPQL 363
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
E H TT ++ +E LFY RGI +AA +++ F VL+ + + E
Sbjct: 364 EIYADDVKCSHGLTTGQLDEEALFYLRSRGIGYDAAKLMLMQAFTAGVLEHVRIPRLRER 423
Query: 476 AQKLIDISLEG 486
Q L++ G
Sbjct: 424 LQDLVEKRFRG 434
>gi|255027295|ref|ZP_05299281.1| hypothetical protein LmonocytFSL_14848 [Listeria monocytogenes FSL
J2-003]
Length = 215
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 132/219 (60%), Gaps = 10/219 (4%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF + V + +GL E ++R IS K EP+WMLE+RL + ++ M P+W
Sbjct: 6 EIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKMPMPTW 65
Query: 74 ARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKV 133
+ F+D+ YY P S +S D+V E+ RT++KLGIP EQ+ LAG
Sbjct: 66 GG-DLSELKFEDITYYVKP-SEQTVRSWDEVPEEIKRTFDKLGIPEAEQKYLAGAS---- 119
Query: 134 AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNS 193
A ++S V K++L+ G++F A+ E+ D+ K+Y + V+P DN +AALNS
Sbjct: 120 ---AQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFKEYFAKVIPPSDNKFAALNS 176
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
AV++ GSF+Y+P G++ L YFRIN + GQFERTL
Sbjct: 177 AVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTL 215
>gi|261881039|ref|ZP_06007466.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
gi|270332221|gb|EFA43007.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
Length = 453
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 86/434 (19%), Positives = 163/434 (37%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P+ Y D L +P+ +++
Sbjct: 30 RDKAFEDFKKQGLPNRKVEDYKYTDMQKL-----------------FEPDYGVNLKRIQF 72
Query: 118 PIR-EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
PI Q V ++ V + + GVI + E +P+L+ KY
Sbjct: 73 PINPYQSFSCDVPNLSTSLYFVVNDQFYSKVHPKTTLPEGVIVGSLKEQAERNPELITKY 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-LIIA 235
+ + + ALN+ + DG FVY+PK V+ + + R LII
Sbjct: 133 YAKLAKTNGDPLTALNTMLAQDGLFVYVPKNVKMDRAIQVVNILRSDVDLMVNRRVLIIV 192
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG+ V +L C D N L V+E +NA + ++ + + + +Y
Sbjct: 193 EEGAEVKFLF-CDDSADDRNFLGTQVIEAFVGENASLDLYCLEATHHKNVRIS-NVY--- 247
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+++ + + IT + + +GE + I++G Q +D+ T +
Sbjct: 248 ----IDQQANSRVNHNVITLHNGITRNHLELVFKGEGAECWCNGCVIADGNQHVDNNTLI 303
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + S + K + G + + G + V + + + +L T P
Sbjct: 304 DHRVGHCKSNQLYKYVLDGKAVGAFAGLIHVRPDSQKTESQMTNQNLCTTKTARMFTQPM 363
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H +T +++D +FY QRGI + A L+ FV EV+ ++ +E
Sbjct: 364 LEIYADDVKCAHGSTVGQLNDAAMFYMQQRGIDKREAKLLLEFAFVGEVIDQIKLEPLRS 423
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 424 SLHHLVEKRFRGEL 437
>gi|260591773|ref|ZP_05857231.1| FeS assembly protein SufD [Prevotella veroralis F0319]
gi|260536057|gb|EEX18674.1| FeS assembly protein SufD [Prevotella veroralis F0319]
Length = 467
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 93/438 (21%), Positives = 161/438 (36%), Gaps = 29/438 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M E R A+ + + PS RY D L +P+
Sbjct: 46 MNEVRDKAFDDFRRLGFPSKKVERYKYTDMQKL-----------------FEPDYGLNLN 88
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+L IP+ E V ++ + + + GV+ ++ EHP+L
Sbjct: 89 RLEIPVDPYETFKCDVPNLSTSLYFIVNDQFYTKALPKAKLNDGVVIDSLNHVAIEHPEL 148
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT- 231
V KY + + ALN+ + DG F+Y+PK V+ + + R
Sbjct: 149 VSKYYGKLADTEKDAVTALNTMLAQDGLFIYVPKNVQLDRTVQVINILRSDVDLMVNRRV 208
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ +EG+ +L C D N L V+E DNA N +
Sbjct: 209 LIVLEEGAKAQFLF-CDHAADDRNFLATQVIEAFVGDNA--------NLELNCMEETHAK 259
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V+ + S+ S + + +T + +GE S I++ Q +D+
Sbjct: 260 NVRVSNVYIEQQRNSRASHNVITLHNGVTRNMLDLVFKGEGSECFCNGCVIADKNQHVDN 319
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + S + K + + + G+V V +GA + + +L
Sbjct: 320 NTLIDHQVPHCISNELYKYVLDENAVGAFAGRVLVRKGAQKTLSQENNRNLCASKTARMF 379
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H +T +++D LFY QRGI + A L+ F+ EV+ K+ +E
Sbjct: 380 TQPMLEIYADDVQCNHGSTVGQLNDAALFYMEQRGIDRKEAKLLLEFAFINEVIDKMELE 439
Query: 472 -FAVEAQKLIDISLEGSV 488
L++ G +
Sbjct: 440 PLRDRLHHLVEKRFRGEL 457
>gi|212212267|ref|YP_002303203.1| SufD [Coxiella burnetii CbuG_Q212]
gi|212010677|gb|ACJ18058.1| SufD [Coxiella burnetii CbuG_Q212]
Length = 426
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 73/431 (16%), Positives = 149/431 (34%), Gaps = 41/431 (9%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
W+ + +L P + + ++ A G + D+ +L +L
Sbjct: 22 WQKEQLKTFLLHGFP---HRKVENWKYTNVTPIAEQAFSFGENTDTDIADFILPDAYRLV 78
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ G +++ + S +T+ K + + AI +
Sbjct: 79 -------FINGHFAPRLSDLSGLPSAVQMTSLKNIQRD-----IQNELAIKKDYQ----- 121
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLII 234
++ +N A+F DG F+ +PK + T R +I+
Sbjct: 122 ---------TAFSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKPTASLTMSQIRHVIL 172
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+E + E + V ++ A ++ +Q +
Sbjct: 173 LEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIANTSIH- 230
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ S+++ + GS ++ + L + + N +D+ T+
Sbjct: 231 -------QNRHSQVTSGHIAMGSELSRDDLNYSLDEAGASCQLLGFYYLNDGCHVDNHTR 283
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + TS+ KG+ A S + GK+ V A + +L++ ++ T P
Sbjct: 284 IDHRVSHCTSQQNYKGVLADKSRAVFNGKIIVQPNAKQTSAHQTNKNLILSSDAEVDTKP 343
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FA 473
+E N H AT ++++E +FY RGI AA + F EV++ LP + A
Sbjct: 344 ELEIYNDDVKCTHGATVGQLNEEAIFYLQSRGINRGAAEHFLTCAFANEVVEMLPNKVIA 403
Query: 474 VEAQKLIDISL 484
Q+L+ L
Sbjct: 404 DRIQQLVTDRL 414
>gi|86157272|ref|YP_464057.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773783|gb|ABC80620.1| Iron-regulated ABC transporter permease protein SufD
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 437
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 89/439 (20%), Positives = 163/439 (37%), Gaps = 32/439 (7%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EP W+ E R A + P+ R+ F L + P +
Sbjct: 17 GEPAWLAEARAGALAAFRAAGLPT---TRHEDWRFTSLAALSTLSLAPAPADGEGPA--- 70
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +LA + A + +G + +++A+
Sbjct: 71 -------------RALLASRPAPEGARLVFENGRFRRELSTGAPLPAGAVLGSLADALRH 117
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TG 226
P+ V+ +L + V + ALN A+ DG+F+ +P G R + F G
Sbjct: 118 APEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVDAPIELVFATGAAGRAVA 177
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R L++A EG+ + E L +V ELV + AEI++ +Q+
Sbjct: 178 VHPRVLVVAGEGARATLAEVHLGTGDT--YLANSVTELVLGEGAEIEHLRLQDEGARAFH 235
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V+ + RS+++ L G + L GE + + +++G
Sbjct: 236 --------VSALFAEQAARSRLAAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGA 287
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ D+ T + H T+ KGI G + + G++ V GA + +LL+ +
Sbjct: 288 RTTDAFTWVEHAVPRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSD 347
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ T P +E H T ++ + LFY RG+ E A +L++ F E++
Sbjct: 348 DAIVDTKPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVD 407
Query: 467 KL-PMEFAVEAQKLIDISL 484
+ P A++L+ L
Sbjct: 408 LVRPAGLHARARELVAARL 426
>gi|316934378|ref|YP_004109360.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
gi|315602092|gb|ADU44627.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
Length = 437
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/429 (17%), Positives = 142/429 (33%), Gaps = 41/429 (9%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A + + P R + DL +
Sbjct: 31 LDETRRQALDVFQRIGLP---HRRIEDWKYTDLR------------------ASMREVLP 69
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK-----KSGVIFMPISEAICE 168
P + A A+ V V V L ++G+ + EA+
Sbjct: 70 VAPAPDASALVRAEAAAGLHAIAGVRRLVLVDGALAPGLSDLAGLEAGLSIRSLREALQS 129
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQ 227
D V + AALN+A+ TDG + + G L +
Sbjct: 130 GDDCVLSL------DTADPMAALNTALMTDGVVIEVADGTTLARPLHILHIASGGAPVAM 183
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F R+ I + + + +E A + + + D A + Y + DS+
Sbjct: 184 FTRSRIALGKDAAATVVESYVAGEGAGSYQVHDAAVIAVGDYARLDYVRI----VEDSRE 239
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
I T G + + + TG ++ + G S E + + NG Q
Sbjct: 240 AFNI----TSAAVSVGAHAHFNAFGITTGGLVSRYQAVVTVAGSHSKVETNGVNLLNGKQ 295
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D+ M H + SR + + ++ ++G+++V + A + +LL+ +
Sbjct: 296 HADTTLVMNHDVPDCVSREGFRAVCDDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSDE 355
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
P +E H A + D LFY RG+P++ A A+++ FV E ++
Sbjct: 356 AEVDNKPELEIFADDVTCGHGAAVGALDDSLLFYLRARGLPQKEAEAMLIQAFVGEAIEA 415
Query: 468 LPMEFAVEA 476
+ + E
Sbjct: 416 IADDDLREL 424
>gi|325685498|gb|EGD27592.1| FeS assembly protein SufD [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 387
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 10/335 (2%)
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
E G + A+ EH DL++KY +N N A G FVY+P V
Sbjct: 55 EFWAKGCVACDWETALAEHGDLLEKYFGRAANFKENRLLGENVAKMEQGLFVYVPDNVAL 114
Query: 211 PMELSTYFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
L+ + + + F L++A + + SY E A Q D+ VVE+ AL
Sbjct: 115 AEPLTVTYLQDSQKQEDFALHVLLVAGKNAAFSYFE-KVASQGDKEATANLVVEICALAG 173
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ +KY+ + ++ KR G +K+ W L
Sbjct: 174 SRVKYAAIDRLGK-------NTTAYL-KRVAWVGRDAKVDWAMGMLSDGKILADYDSDLY 225
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ + + IAI+ G Q T + + K + RI+ G S + G V +G
Sbjct: 226 GQGARAKMNVIAITIGDQVQGLNTVVNNYGKKSDGRILQHGAILQKSCLVFNGIGHVMKG 285
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A + + L++ + P + ++ H A+ ++ D+ L+Y + RG+P+
Sbjct: 286 AKGANAQQENRVLMLSRSARGDANPILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPK 345
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
A L++ GF+ VL K+P ++++ L
Sbjct: 346 PLAERLVIRGFLGPVLTKIPEASRQPLFEMVERKL 380
>gi|39935532|ref|NP_947808.1| FeS assembly protein SufD [Rhodopseudomonas palustris CGA009]
gi|39649385|emb|CAE27907.1| sufD, needed for fhuF Fe-S center production/stability
[Rhodopseudomonas palustris CGA009]
Length = 437
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/423 (16%), Positives = 142/423 (33%), Gaps = 33/423 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + P R + DL + + +
Sbjct: 33 DTRRQALDTFQRIGLP---HRRIEDWKYTDLRALMREVLPLAAAPEAAALAQAEAAAKLH 89
Query: 116 GIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
I + +L GV ++ A ++ + + +E L+ + + A
Sbjct: 90 AIDGVRRLVLVDGVLAPGLSELAGLEAGLSIRSLREALQSGDDRVLSLDTA--------- 140
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLI 233
+ ALN+A+ TDG + + G L + F R+ I
Sbjct: 141 -----------DPMVALNTALMTDGLVIEVADGTTLARPLHILHIASGGAPAAMFTRSRI 189
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + +E A + + D+A + Y + DS+ I
Sbjct: 190 SLGNAAVATVVESYVAGEGAAAYQVHDSAVITIGDHARLDYVRI----VEDSREAFNI-- 243
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
T G + + + TG ++ + G S E + + NG Q D+
Sbjct: 244 --TSATVAVGAHAHFNAFGITTGGLVSRYQAVVTVAGSHSEVETNGVNLLNGKQHADTTL 301
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
M H + SR + + ++ ++G+++V + A + +LL+ +
Sbjct: 302 VMNHDVPHCVSREGFRAVVDDRGHSVFQGRINVRQAAQQTDAKMMTRALLLSDEAEVDNK 361
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H A + D LFY RG+P++ A A+++ FV E ++ + +
Sbjct: 362 PELEIFADDVTCGHGAAVGALDDSLLFYLRARGLPQKEAEAMLIQAFVGEAIEAIADDNL 421
Query: 474 VEA 476
E
Sbjct: 422 REL 424
>gi|90424335|ref|YP_532705.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB18]
gi|90106349|gb|ABD88386.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisB18]
Length = 459
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/428 (16%), Positives = 158/428 (36%), Gaps = 29/428 (6%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
EP + E R ++ + + P+ R + DL + +
Sbjct: 47 EP--VTERRQASFEAYASKGLPN---RRIEDWKYTDLRVLMREVLPLAAAPDEAALQRAA 101
Query: 110 RTYEKLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+L + +L GV ++ A ++ + + + L G
Sbjct: 102 AALAQLETRDTTKLVLVDGVFAPSLSDHAGLEAAIEIRSLADVLGDDG---------NAS 152
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
DL+ + + +LN+A+ TDG + + G + + +
Sbjct: 153 RADLLN------IKASADAMISLNAAMATDGVLITVADGASVGKPIHIVHVATQSKAASY 206
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R+ + G+ V+++E + V + D AE+++ +
Sbjct: 207 TRSFLKLGNGARVTFVESFVGAAGAASYQANDAVVIWVGDGAELEHVRLMEDALDAINIS 266
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
++ G ++K++ L +G ++ + GE + + + G Q
Sbjct: 267 TAVFT--------VGAKAKLNTLNLTSGGGVSRYQGFVSIAGEGAHVATNGVNLLKGTQH 318
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+ + H+ + TSR V + + G +++ ++G+++VH+ A + +LL+ +
Sbjct: 319 GDTTLVLNHVVPHCTSREVFRAVLDGRAHSVFQGRINVHQPAQKTDAKMMTRALLLSDEA 378
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A P +E H +TT + + LFY RG+ E+ A +L++ F+ E ++ +
Sbjct: 379 EADNKPELEIFADDVTCGHGSTTGALDESLLFYLRARGLSEKDAQSLLIQAFIGEAIESI 438
Query: 469 PMEFAVEA 476
+ E
Sbjct: 439 ADDGLREL 446
>gi|313885411|ref|ZP_07819161.1| FeS assembly protein SufD [Eremococcus coleocola ACS-139-V-Col8]
gi|312619141|gb|EFR30580.1| FeS assembly protein SufD [Eremococcus coleocola ACS-139-V-Col8]
Length = 401
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 81/379 (21%), Positives = 151/379 (39%), Gaps = 13/379 (3%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
P P + +T++ L P E+ + + + V +
Sbjct: 14 PNLKKFPTCFLNKMEVAKKTWKSLTPPQIERVDFSDFD----FFQSDLKDIPVFHYDATQ 69
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
L +SGVI M + +A +PDL++ L +V+ + A N A G F+Y+P +
Sbjct: 70 LAQSGVIIMDLFQACLTYPDLIQDNLFSVIDSQADQVTAYNLAFLQGGLFIYVPPYLELD 129
Query: 212 MELSTYFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
L IN + F R L++AD S+ +YLE + + N+ V E++A + A
Sbjct: 130 QALDITVLINNQKQAGFNQRILLLADHHSHFTYLERLQSQGQQANKGSLMV-EVIANEGA 188
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++ Y + Q F KR ++I+W+ A T L G
Sbjct: 189 QVNYLALDAIDSAQGQ-------FYLKRYGATQKDAQINWSIAAMNQANTILDLDTYLLG 241
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
S +AI+N Q +K+++ A + I G+ + ++ G + +GA
Sbjct: 242 PGSQSYVQIVAIANQDQVQVIDSKVVNQANYSVGHIYQHGVILDQARLSFNGIGHIIKGA 301
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
+ + L++ + P + H A+ +I + L+Y + RG+ +
Sbjct: 302 KQADAQQESRVLMLSDQGRGDANPILLIDEFEVTAGHAASIGQIDADQLYYLMSRGLKRK 361
Query: 451 AAIALIVNGFVREVLQKLP 469
A L++ GF+ V+ +P
Sbjct: 362 EAEYLVIRGFLGSVIHSMP 380
>gi|254786626|ref|YP_003074055.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
gi|237684877|gb|ACR12141.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
Length = 440
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/339 (20%), Positives = 123/339 (36%), Gaps = 12/339 (3%)
Query: 134 AVDAVFDSVSVVTTFKEELK--KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
A+ VF + EL+ GV P S A E + L++ V +F+A
Sbjct: 82 ALKLVFVNGVYCADLSSELEGLPDGVELTPFSLATAEQQASISCALNSAVVGEKHFFAVA 141
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINE--KGTGQFERTLIIADEGSYVSYLEGCTA 249
NSA +G ++ + + +E + R L+ E S + +E
Sbjct: 142 NSAQVNEGVYLKVRANTLLLTPIQILHLHSESEQQQSAVLRVLVDMGESSQATLIEQFAG 201
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
N ++ E + DNA+ Y + G N G + +
Sbjct: 202 GDGVANVFVNSLNEFLVGDNAKFDYYRLNLEAETVPHIGGVHANL--------GRCATFN 253
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
+ GS + RGE + + + + Q +D T + H + TS + +
Sbjct: 254 SFYIALGSVLKRLDLVVNHRGEGAHCDMQGVYLPRNKQLVDFHTCIEHAVPHCTSNEIFR 313
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
GI A S + G++ +H A + +LL N T P +E H A
Sbjct: 314 GIVADESKAVFNGRIHIHPDAQKTYAQLSNKNLLTSNKAEVDTKPELEIYADDVQCAHGA 373
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
T +++ L Y RG+ E A ++ GF+ E++ +
Sbjct: 374 TVAQLDSTALHYMQTRGVSAEEARVMLSFGFINELINDI 412
>gi|330717957|ref|ZP_08312557.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc fallax KCTC 3537]
Length = 401
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 169/436 (38%), Gaps = 43/436 (9%)
Query: 54 MLEWRLL--AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
M +++ + + P++ +++Y + D L S + +DV E+L T
Sbjct: 1 MTKYQKQDISLTAAQQLPLPNFPKVKYASWHLDQLMPVQKAISNAHFLTAEDVGIEILGT 60
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+EL +GV+ M I A ++P
Sbjct: 61 QAG------------------------------HQYLPQELINAGVLVMSIQAAKKDYPQ 90
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-FER 230
LV++YLS+V+P + +A N + G FVYIP V L N TG +R
Sbjct: 91 LVQRYLSSVIPADQDRLSAQNLLQYNAGIFVYIPDNVVIQSLLQLVLVQNATTTGDAVQR 150
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI + + + L+ + + V+E+ A ++YS +
Sbjct: 151 ILIYVGKNAQCTILQ-QLRTMGEATIKSSTVIEVFLDAGANVQYSAI-------DALSAN 202
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
++ R ++++W Q E + +L G+ + +A+ + Q
Sbjct: 203 TSGYLN-RSALLADNAQLNWAQAEFNRGNMVMHLDTMLSGQGAQTHANVMAMVSQKQVQG 261
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T++ + ++T I+ +G+ + + G ++ +GA + + L++
Sbjct: 262 INTRVSNRGRHTIGHILQRGVILDHAALVFNGVGNIIKGAKGADAQQESRILMLSKKARG 321
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
P + S H A+ +++ L+Y + RG+ E+ A L++ GF+ +L ++P
Sbjct: 322 DANPLLLIDESDVTAGHAASVGRMNAAQLYYLMSRGLCEKVARRLVIRGFMGPILAQIPH 381
Query: 471 EFAVE-AQKLIDISLE 485
+ E + I+ L+
Sbjct: 382 QVVRESIIEDIERQLK 397
>gi|192291123|ref|YP_001991728.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
gi|192284872|gb|ACF01253.1| FeS assembly protein SufD [Rhodopseudomonas palustris TIE-1]
Length = 437
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 71/423 (16%), Positives = 141/423 (33%), Gaps = 33/423 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A + + P R + DL + + +
Sbjct: 33 DTRRQALDTFQRIGLP---HRRIEDWKYTDLRALMREVLPLAAAPEAAALAQAEAAAKLH 89
Query: 116 GIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
I + +L GV ++ A ++ + + +E L+ + + A
Sbjct: 90 AIDGVRRLVLVDGVLAPGLSELAGLEAGLSIRSLREALQSGDDRVLSLDTA--------- 140
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLI 233
+ ALN+A+ TDG + + G L + F R+ I
Sbjct: 141 -----------DPMVALNTALMTDGLVIEVADGTTLTRPLHILHIASGGAPAAMFTRSRI 189
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + +E A + + D+A + Y + DS+ I
Sbjct: 190 SLGNAAVATVVESYVAGEGASAYQVHDSAVITIGDHARLDYVRI----VEDSREAFNI-- 243
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
T G + + + TG + + G S E + + NG Q D+
Sbjct: 244 --TSATVAVGAHAHFNAFGITTGGLASRYQAVVTVAGSHSEVETNGVNLLNGKQHADTTL 301
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
M H + SR + + ++ ++G+++V + A + +LL+ +
Sbjct: 302 VMNHDVPHCVSREGFRAVVDDRGHSVFQGRINVRQAAQQTDAKMMTRALLLSDEAEVDNK 361
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H A + D LFY RG+P++ A A+++ FV E ++ + +
Sbjct: 362 PELEIFADDVTCGHGAAVGALDDSLLFYLRARGLPQKEAEAMLIRAFVGEAIEAIADDNL 421
Query: 474 VEA 476
E
Sbjct: 422 REL 424
>gi|323343779|ref|ZP_08084006.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
gi|323095598|gb|EFZ38172.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
Length = 447
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 91/437 (20%), Positives = 170/437 (38%), Gaps = 27/437 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A+ + + PS RY ID ++ P + + L ++ +
Sbjct: 26 MNAVRDKAFDDFQQLGFPSKKAERYKYIDIQKIF---EPDFGLNLRRL-EMPLNPYEEF- 80
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
K G+P + V D+ + + + E GVI + + ++PD +
Sbjct: 81 KCGVPNLD------TSLYFVVNDSFYSKIRHGSPLPE-----GVIVGSLRDETAKNPDFI 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTL 232
KY S + ++ ALN+ + DG VY+PKGV+ + + R L
Sbjct: 130 GKYYSKIAKTEEDAITALNTMLAQDGLLVYVPKGVKVDRAVQVINILRSDIDLMLNRRVL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II +E + + L C D N L V+E+ A + + +
Sbjct: 190 IIVEEEAEIKLLF-CDDSADDRNFLATQVIEVYVAKGASLDLYCL--------EETHHKN 240
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
V+ + S+++ + + +T + +GE + I++ Q +D+
Sbjct: 241 TRVSNVYVEQQANSRVNHNIITLHNGVTRNRLDLVFKGEGAECNCNGCVIADKQQFVDNN 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + TS + K + + + G+V V A + + + +L I +T
Sbjct: 301 TLIDHQVGHCTSNELYKYVLDDRATGAFAGRVVVRHDAQKTVSEERNQNLCITKEAHMYT 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H +T +++D LFY QRGI + A L+ FV EV+ ++ +E
Sbjct: 361 QPMLEIYADDVKCAHGSTVGQLNDAALFYMRQRGISLKEAKLLLEFAFVGEVIDQIKLEP 420
Query: 473 AVE-AQKLIDISLEGSV 488
E L++ G +
Sbjct: 421 LREHLHHLVEKRFRGEL 437
>gi|329114665|ref|ZP_08243424.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
gi|326696145|gb|EGE47827.1| FeS cluster assembly protein SufD [Acetobacter pomorum DM001]
Length = 427
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 81/421 (19%), Positives = 140/421 (33%), Gaps = 40/421 (9%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A L P A + L AA + P D + L
Sbjct: 27 RQAAIGALLRTGLPD---RHIEAWKYTSLRPLAAQEFQAPPAQYDAAQAKSL-------- 75
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK--KSGVIFMPISEAICEHPDLVKK 175
L + + V +V V V F ++L GV S+
Sbjct: 76 -------LDNLLSKHDTVQSVPRIVFVNGRFVKDLSLLPEGVDVSFFSQN--------NL 120
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLII 234
+ ALN+A+ DG+ +++ KG L + R ++
Sbjct: 121 ASDVQASPDRDPLVALNTALVEDGATLHVAKGADAGRVLLISLGVAGDTAISFHPRHSVV 180
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+EG+++S L H V+E+ + A++ ++T+Q P
Sbjct: 181 LEEGAHLSLLS---LSAGVGQYFHNPVMEVTVGERAKLYHTTLQTEGPQAIA-------- 229
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + L G ++ L+ + Q D +
Sbjct: 230 LATTYVQVAGHGVYNSFALGLGGLLSRHEVHARLKAPHAQLHVNGAQNLAEHQVGDITSV 289
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H A + TSR + + G + ++GKV V + A + + +LL+ N P
Sbjct: 290 ITHAASDCTSRQTVRNVLDGHARGVFQGKVLVEQVAQKTDGYQMNQALLLSENAEIDAKP 349
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + D+ LFY RG+PE A +++ F+ E L + E A
Sbjct: 350 ELEIYADDVRCSHGATVGALDDDQLFYMRSRGVPEAQARQILIAAFLDEALSLIEDETAQ 409
Query: 475 E 475
E
Sbjct: 410 E 410
>gi|282163080|ref|YP_003355465.1| putative ABC transporter [Methanocella paludicola SANAE]
gi|282155394|dbj|BAI60482.1| putative ABC transporter [Methanocella paludicola SANAE]
Length = 410
Score = 220 bits (561), Expect = 4e-55, Method: Composition-based stats.
Identities = 98/419 (23%), Positives = 167/419 (39%), Gaps = 30/419 (7%)
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR----------TYEKLGIPIREQEILAG 127
+ ++ A P +D+D E + ++L ++E+ + AG
Sbjct: 2 LEPVRLSEIKKKAEAAMNKRPAYGNDIDLEKYEKAVPVREKITSLDQLSSSVKERALHAG 61
Query: 128 VQTS---KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
V S + D V T E GV M I+ A+ E D ++ Y ++
Sbjct: 62 VDASMRQRSGSYFQLDQSVVHTATSME----GVELMDINAAL-EKYDWLQDYFFKLIQPD 116
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
+ + A + G F+ G + L I +G Q ++IA+EGS + +
Sbjct: 117 QDKFTAYGATHPFGGYFIRALPGAKVTFPLQACMYIGREGMIQNVHNILIAEEGSELHVI 176
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
GCT LH V E DNA++ Y+ + NW P + G
Sbjct: 177 TGCTTDTHVSQGLHIGVSEFFIKDNAKLTYTMIHNWAPEVVVRP--------RTNTVMGK 228
Query: 305 RS-KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
S +S T YP C ++GE F ++ + +D G+K + AK
Sbjct: 229 NSVFLSNYVSMTPVKDAQMYPGCTMQGENGVARFNTVVYAPKGSHLDLGSKAVLKAKGCK 288
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+ ++++ IS G + RG + + +C LL+ + + +P +
Sbjct: 289 AELIARTISKGGYIAS-RGL--IQGDVPDIKAHLECRGLLLSGDGTIYAVPELLGTVPGV 345
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
+L HEA KI++E + Y + RG+ + A ALIV GF+ + LP E E +K ID+
Sbjct: 346 DLSHEAAVGKIAEEEIQYLMSRGVDSDTATALIVRGFLDVDIHGLPPELQAEIKKTIDL 404
>gi|150399241|ref|YP_001323008.1| SufBD protein [Methanococcus vannielii SB]
gi|150011944|gb|ABR54396.1| SufBD protein [Methanococcus vannielii SB]
Length = 408
Score = 220 bits (561), Expect = 4e-55, Method: Composition-based stats.
Identities = 93/405 (22%), Positives = 179/405 (44%), Gaps = 26/405 (6%)
Query: 85 DLYYYAAPKSI-VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
DL Y P+ SL ++ + K+G+ + E++ L ++
Sbjct: 29 DLSKYPIPRENLKTLDSLSELSDDHKTALSKVGVDVSEKDTL--------GSYIQINNDP 80
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
V T + + MPI+E + ++ +++Y VV + D + A + T+G F+
Sbjct: 81 VYTKMYSD-----IEIMPITETLKKYD--IEEYYWNVVEIKDKYSARVAD-EITEGYFIR 132
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
PKGV+ + L T I + Q +I+ +EG+ ++ + GCT ++ LH V E
Sbjct: 133 APKGVKKTIPLQTCLLIGTEEVSQNVHNIIVVEEGAELNVITGCTTSPHVKSGLHLGVSE 192
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
++++ ++ + NW ++ I+ Y
Sbjct: 193 FYLKKDSKLTFTMIHNWGE-------NVHVRPRTGIKMDDNSIFINNYVTMMPVKSIQSY 245
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
P+ G+ F +IA G ++D G++++ KN S I+S+ I + RG
Sbjct: 246 PTAYCEGDNCKATFQTIAYGKGKSKMDMGSRVILSGKNAASDIISRVIVVDDAEIISRGH 305
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ + + +C L++ NN H IP +E+K + L HEA KI++ + Y +
Sbjct: 306 LIGAE--ENVKGHLECRGLILSNNAHIHAIPELEAKKTDLELSHEAAVGKIAENQIMYLM 363
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
RG+ E+ A +LI+ GF+ + LP E A ++++D++LE ++
Sbjct: 364 SRGLSEDEASSLIIKGFLSVDISGLPPELAKSVKEMMDMTLENAL 408
>gi|269986284|gb|EEZ92592.1| Hedgehog/intein hint domain protein [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 679
Score = 220 bits (561), Expect = 4e-55, Method: Composition-based stats.
Identities = 103/261 (39%), Positives = 152/261 (58%), Gaps = 11/261 (4%)
Query: 11 VRKIDVDQYKYGFETNIQVDKA--PKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTM 68
+ KI+ D KY F+ + K +GL+EDI+R IS K+EP+WM ++R AY+ ++
Sbjct: 1 MEKIEFDYSKYDFKNSTAKYKILFNEGLSEDIVRKISKLKDEPEWMTDFRTNAYKFFVKR 60
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
P W I+F+++ Y+A + D+ ++ TY+KLGIP E++ L+G
Sbjct: 61 PVPEWG-ADLSKINFENITYFARATDK-KTNNWADLPDDIRDTYDKLGIPEAEKKSLSG- 117
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V+ +++S V + K+EL++ GVIF AI ++P+LVKKY V+ DN +
Sbjct: 118 ------VEVMYESEVVYNSIKKELEELGVIFCDTDTAIKQYPELVKKYFGKVISPNDNKF 171
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
AALNSAV++ GSF+Y+PKGV+ PM L YFRIN GQFERTLIIADEGS V+Y+EGC
Sbjct: 172 AALNSAVWSGGSFIYVPKGVKVPMPLQAYFRINAANMGQFERTLIIADEGSDVTYIEGCL 231
Query: 249 APQRDENQLHAAVVELVALDN 269
+ +
Sbjct: 232 PAEELVSNGETFSTIESISKG 252
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+ CTAP ++ LHAAVVE++A NA +KY TVQNW +YN VTKR
Sbjct: 587 VHNCTAPVYSKDSLHAAVVEVIAHKNAHVKYITVQNW-------SSDVYNLVTKRAFAY- 638
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQS 333
S + W GS +T KYPS L
Sbjct: 639 ENSFVEWIDANMGSKVTEKYPSVYLMEPGG 668
>gi|150402343|ref|YP_001329637.1| SufBD protein [Methanococcus maripaludis C7]
gi|150033373|gb|ABR65486.1| SufBD protein [Methanococcus maripaludis C7]
Length = 408
Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats.
Identities = 88/405 (21%), Positives = 184/405 (45%), Gaps = 26/405 (6%)
Query: 85 DLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
DL Y PK + SL+D+ + + +G+ I E+ + +S +
Sbjct: 29 DLSMYPTPKENLLKVDSLNDLSDDHKKALATVGVDIEEKNTI--------GSYVQVNSDA 80
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
+ + +I MPI+EA+ ++ + Y + V + D + A + + T+G F+
Sbjct: 81 IYAKMYSD-----IIIMPITEALEKYE--LDDYYWSAVEMSDKYGARVAN-ELTEGYFIR 132
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
PKGV+ + L T I + Q +II ++G+ ++ + GCT ++ LH + E
Sbjct: 133 APKGVKKTIPLQTCLLIGSEEVSQNVHNIIIVEDGAELNLITGCTTSPHVKSGLHLGISE 192
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NA++ ++ + NW ++ I+ Y
Sbjct: 193 IYIGKNAKLTFTMIHNWGE-------SVHVRPRTAIKMDDDSIFINNYVTMMPVKSIQSY 245
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
P+ G+ + F +I G ++D G++++ +N+ + ++S+ I + RG
Sbjct: 246 PTAYCEGKNAKATFQTIVYGKGDSKLDMGSRVILSGENSAADMISRVIVVDNAEVISRG- 304
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ +H + +C L++ N+ +P +E++ + L HEA KI+++ + Y +
Sbjct: 305 -HLVGAESHVKGHLECRGLILSNDGHILAVPELEAERTDLELSHEAAVGKIAEDQIQYMM 363
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
RG+ E+ A +LI+ GF+ + LP E A ++++D++LE ++
Sbjct: 364 SRGLSEDEASSLIIKGFLSVDISGLPDELAKSVKEMMDMTLENAM 408
>gi|282881111|ref|ZP_06289798.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
gi|281304915|gb|EFA96988.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
Length = 447
Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats.
Identities = 83/416 (19%), Positives = 160/416 (38%), Gaps = 26/416 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A++ + PS + + D+ P + L ++ + ++
Sbjct: 26 MNHVREQAFKDFKQQGFPS---RKIERYRYTDINALFEPNYGLNLNRL-EIPVDPYAAFK 81
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
V ++ V + + GV + + EA E PDLV
Sbjct: 82 ------------CDVPNLSTSLYFVVNDAFYTKALPKVGLPDGVKVLSLREASMEMPDLV 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-L 232
KY + ++ ALN+ + DG F+Y+ KGV+ + + R L
Sbjct: 130 AKYYGQIAKTQEDALTALNAMLAQDGLFIYVSKGVQMDRAVQVINLLRSDVDLMVNRRVL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+ +EG+ +L C D L V+E +NA + ++ + +++ +Y
Sbjct: 190 IVMEEGAQAKFLF-CDHTIDDHRFLATQVIEAYVGENASLDLYCMEETHERNTRIS-NVY 247
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ S+ + L + IT + RGE + I++ Q ID+
Sbjct: 248 -------VEQQANSRFNHNVLTLHNGITRNQLQLVFRGEGAECVCNGCVIADKQQHIDNN 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + SR + K + + + G+V V + A + + + +L ++
Sbjct: 301 TFIDHAVPHCVSRELYKYVLDDQATGAFAGRVLVEKDAQKTNSEMRNQNLCTTKQARMYS 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H +T +++DE +FY QRGI ++ A L+ F+ EV+ +
Sbjct: 361 QPELEIYADDVKCGHGSTVGQLNDEAMFYMQQRGISQKEAKLLLEFAFINEVVDNI 416
>gi|311746538|ref|ZP_07720323.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
gi|126575438|gb|EAZ79770.1| FeS assembly protein SufD [Algoriphagus sp. PR1]
Length = 422
Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats.
Identities = 87/416 (20%), Positives = 152/416 (36%), Gaps = 36/416 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ R +L+ P+ Y F + + L+ EL
Sbjct: 21 FTQVREEGKNSFLSQGLPTLKTEEY---KFTAIT-----------KKLEQSISELKAA-- 64
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ K A+ + FD +V L+ + + + D
Sbjct: 65 --------KPFAVSEDDVKAAIPSGFDGTVLVFANGHLLEDQCINVEGLD--FSKLSDKS 114
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY-FRINEKGTGQFERTL 232
+ L ++ V + + ALN A F G + IPK + F +G R
Sbjct: 115 ETALGSIAKVEKDPFVALNQASFDQGIHISIPKKEIVEKAILLLSFYKANEGQVIQPRVW 174
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I A + + VS++ + VVE+ N++I+Y ++QN +
Sbjct: 175 IEAGDFAEVSFISQSVNLSD-SSYFVNKVVEIKGGLNSQIRYYSLQNEGSNAIEVCNTET 233
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N + S+ S + + + L G S G Y I + NG +D+
Sbjct: 234 NLL--------QDSRFSSVTISLSGDMVRNNLNLNLLGSNSEGNMYGIYLLNGKAHVDNH 285
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + S + KGI A S + GK+ V + A + F Q +++L+ + +T
Sbjct: 286 TNVDHTIPHAESNELYKGILADHSRGVFNGKIFVRQDAQKTNAFQQNNNILLSEDAIVNT 345
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H TT ++ +E LFY RGI + A L++ F EVL+ +
Sbjct: 346 KPQLEIWADDVKCSHGCTTGQLDEEALFYLQARGIDKVQAKGLLLYAFAGEVLEHI 401
>gi|126726557|ref|ZP_01742398.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2150]
gi|126704420|gb|EBA03512.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2150]
Length = 424
Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats.
Identities = 79/436 (18%), Positives = 152/436 (34%), Gaps = 39/436 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W + R A R M P+ R + P++L P +
Sbjct: 21 WGTKSRKDALARLTAMGLPN---HRDEYWKYT------------RPETLTSATPTPAAIF 65
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ A +D VFD+ + ++L+ +GV ++ A+
Sbjct: 66 DGNDEAPM---FDAIDCLQITFIDGVFDADA-----SDDLEMAGVSIERLATAMENDIHW 117
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSF--VYIPKGVRCPMELSTYFRINEKGTGQFER 230
K T+ G N +A+ + + V I + + + + +
Sbjct: 118 AKDLYGTLETNGQNPVQRPLAALNSATATDGVVIHATGQAAKPVLIRYLHQNETSDAVLH 177
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+I D+G+ ++ LE A R V+E+ + A + Q G +
Sbjct: 178 HVIKLDDGAALTVLETGPAAARL-----NKVMEVDQGNEARFNHVCTQ----GRDHARRA 228
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ + + S+ L +T + G+ + A+ +G D
Sbjct: 229 VTHIFAR----LATESRFKSFTLTANGVLTRNECIIEITGDDAFAHVAGAALGDGDFHHD 284
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ H A N SR V K + + ++GK+ V A + + +LL+ ++
Sbjct: 285 DTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVQPDAQKTDGYQISQALLLDDDSQF 344
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
P +E H +TT I + LFY RG+ ++ A L+V F+ E + ++
Sbjct: 345 LAKPELEIYADDVACSHGSTTGAIDETALFYLRSRGVEKDEAQDLLVLSFLAEAIGEIED 404
Query: 471 E-FAVEAQKLIDISLE 485
E A E Q ++ L+
Sbjct: 405 EVLADEIQSRLESWLK 420
>gi|313124439|ref|YP_004034698.1| fe-s cluster assembly ABC transporter permease [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281002|gb|ADQ61721.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 387
Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats.
Identities = 74/335 (22%), Positives = 133/335 (39%), Gaps = 10/335 (2%)
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
E G + A+ EH L++KY +N N A G F+Y+P V
Sbjct: 55 EFWAKGCVACDWETALAEHGYLLEKYFGRAANFKENRLLGENVAKMEQGLFIYVPDNVAL 114
Query: 211 PMELSTYFRINEKGTGQFE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
L+ + + + F L++A + + SY E A Q D+ VVE+ AL
Sbjct: 115 AEPLTVTYLQDSQKQEDFALHVLLVAGKNAAFSYFE-KVASQGDKEATANLVVEICALAG 173
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ +KY+ + ++ KR G +K+ W L
Sbjct: 174 SRVKYAAIDRLGK-------NTTAYL-KRVAWVGRDAKVDWAMGMLSDGKILADYDSDLY 225
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ + + IAI+ G Q T + + K + RI+ G S + G V +G
Sbjct: 226 GQGARAKMNVIAITIGDQVQGLNTVVNNYGKKSDGRILQHGAILQKSCLVFNGIGHVMKG 285
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A + + L++ + P + ++ H A+ ++ D+ L+Y + RG+P+
Sbjct: 286 AKGANAQQENRVLMLSRSARGDANPILLIDDNDVFAGHAASVGRVDDQQLYYLMSRGLPK 345
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
A L++ GF+ VL K+P ++++ L
Sbjct: 346 PLAERLVIRGFLGPVLTKIPEASRQPLFEMVERKL 380
>gi|86138291|ref|ZP_01056865.1| FeS assembly protein SufD [Roseobacter sp. MED193]
gi|85824816|gb|EAQ45017.1| FeS assembly protein SufD [Roseobacter sp. MED193]
Length = 436
Score = 219 bits (558), Expect = 8e-55, Method: Composition-based stats.
Identities = 83/433 (19%), Positives = 150/433 (34%), Gaps = 46/433 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R T+ P R + A ++ + D P + +++L I
Sbjct: 40 RQAALSRVQTLGLP---GRRDEYWKYTRPDTLTAAEATQASVFVTDEAP-MFDEFDRLKI 95
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V VD V++ + ++L GV I++ C+ K
Sbjct: 96 ---------------VFVDGVYNPEA-----SDDLSLEGVQIDRIADICCQDIHWAKDLY 135
Query: 178 S----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
AALN+A DG +++ + ++ + +++ + +I
Sbjct: 136 GVLEARGQSPVARPLAALNTAFAQDGVAIHVTG--KPSKPINLVYVHSDEASDAILHHVI 193
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ G+ + LE A R +E+ D ++ Q G + +
Sbjct: 194 RVEAGAEATILENGPAASRF-----NKCMEIDIADTGKLHLVRAQ----GRDHERRAATH 244
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G S L +T L G+ + + +G D
Sbjct: 245 LFAR----LGTESVFKSFTLTVNGILTRNEAVVELLGDDAIAHIAGACVGDGEFHHDDTV 300
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V GA + + SLL+ ++
Sbjct: 301 FITHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDDDSQFLAK 360
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H +TT I +E LFY RG+P + A L+ F+ E ++++
Sbjct: 361 PELEIYADDVICSHGSTTGAIDEEALFYLRSRGVPADEATDLLTLAFLAEAVEEIED--- 417
Query: 474 VEAQKLIDISLEG 486
E I LEG
Sbjct: 418 GEIAAAIVARLEG 430
>gi|86606834|ref|YP_475597.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
gi|86555376|gb|ABD00334.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
Length = 429
Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats.
Identities = 75/417 (17%), Positives = 143/417 (34%), Gaps = 38/417 (9%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + P+ + DL A K + +D T E
Sbjct: 34 LRQQARAQLAELGIPTPREED---WKYSDLSPLLAHKFRLAAAGDPSLDA---ATLEPWL 87
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P V + + + + +P+++A +L++
Sbjct: 88 WPEASYSRAVFVNGYFAPQLSDLSGLP-----------TALQVIPLAQA---PGELLQTL 133
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF---ERTLI 233
T + + ALN+A DG + + G P L F R L+
Sbjct: 134 AKT------DVFTALNTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAVLAQPRCLL 187
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
S ++ +E + AV E+ + + + + +Q
Sbjct: 188 SLQAHSSLTLIEDHVSLGSGIP-FSNAVTEIALAEGSRLHHVILQRQGSPAFH------- 239
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ K + S ++ GS + G Q+ + + + G Q D+ +
Sbjct: 240 -INKTAVRQSCDSHYRLQAIQWGSQFSRHNLEITQAGAQAHTQLQGLTLLKGSQHSDTHS 298
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++LH A + +SR + K I + + G++ V + A + +LL+ T
Sbjct: 299 RLLHQAPHGSSRQLHKCIVDEAARAVFSGRILVSQAAQLTDAAQTNRNLLLSPKARVDTR 358
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
P +E + H AT S++ E +FY RGIP+ A L+ F E+L+ +P+
Sbjct: 359 PQLEIFADNVKCAHGATVSQLEAEEIFYLQSRGIPQAQARQLLTYAFAAEILEGIPL 415
>gi|56696887|ref|YP_167249.1| FeS assembly protein SufD [Ruegeria pomeroyi DSS-3]
gi|56678624|gb|AAV95290.1| FeS assembly protein SufD [Ruegeria pomeroyi DSS-3]
Length = 426
Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats.
Identities = 86/421 (20%), Positives = 148/421 (35%), Gaps = 43/421 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + +P++ D P + ++L I
Sbjct: 30 REAALARLREMGVP---GRRDEYWKYTRPDSLISPEAPRAATFHTDE-PMMFDAIDRLKI 85
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V VD VFD+ + + L+ GV I + C+ K
Sbjct: 86 ---------------VFVDGVFDAEA-----SDALELDGVRIERIEDICCKDIHWAKDLY 125
Query: 178 S----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
AALN+A DG +++ + +S ++ + + +I
Sbjct: 126 GVLEARGQTPVPRPLAALNTAFAADGIAIHVTG--KPSKPISLIYKHASESSDALLHHVI 183
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ G+ V+ LE A R +E+ D + + Q G + + +
Sbjct: 184 RVESGAEVTILENGPAASRF-----NKCMEIDIADGGTLHHVRAQ----GRDHERRAVTH 234
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
T+ G S L +T L G++ + +G D
Sbjct: 235 MFTR----LGAASVYKSFTLTVNGVLTRNEQVVELTGDEGVAHVAGACVGDGDFLHDDTV 290
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V GA + + SLL+ ++
Sbjct: 291 FVTHDAVNCESRQVFKKVLRNGATGVFQGKILVQPGAQKTDGYQISQSLLLDDDSQFLAK 350
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H +T+ I D LFY RG+PE+AA L+ F+ E ++++ E
Sbjct: 351 PELEIYADDVACSHGSTSGAIDDTALFYLRSRGVPEKAATDLLTLAFLAEAVEEIEDEAL 410
Query: 474 V 474
V
Sbjct: 411 V 411
>gi|170078418|ref|YP_001735056.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
gi|34765745|gb|AAQ82449.1| SufD [Synechococcus sp. PCC 7002]
gi|169886087|gb|ACA99800.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
Length = 452
Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 36/418 (8%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R + K PS R A DL + Q +L +
Sbjct: 42 IRDQGLEKVRQGKFPS---RRDEAWRVTDLSV-LKHTTFQAAQPTTPTAADL----DVFA 93
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+P L V + + GV + + + KY
Sbjct: 94 LPETANSRLVFVNGHYAPDQSCVSGLP-----------DGVFVGNFTALAADQKAAIAKY 142
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TGQFERTLII 234
L D +AALN A D + V++PK + F N T R L+I
Sbjct: 143 LGQQTEQLD-VFAALNDAGLGDLAIVWVPKNTVVEQPIQLLFVGNGADQPTAMQSRCLVI 201
Query: 235 ADEGSYVSYLEGC------TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
A+ G+ + +E Q + A+ E+ NA + + VQ G
Sbjct: 202 AETGAQANVVEYYGAIAQGCTDQDTHRYFNNALTEVWVQTNARLNHVRVQREAGGAIHLG 261
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S T++ G+ ++ + G Q+ + + Q
Sbjct: 262 NTA--------IAQAQDSHYQLTEVNFGARLSRHTLTLTQNGPQTETILKGLTMVGAEQL 313
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+ T + + + K I + + + G++ V + A + +LL+
Sbjct: 314 SDTHTAVYLQHPYGSVDQLHKCIIDDAARSVFNGQIHVPQKAQMTNAAQLNRNLLLSPKA 373
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P ++ + H AT S++ E +FY RG+ + A L+++ F E+L
Sbjct: 374 KVDTKPELQITADNVKCAHGATVSQLEAEEIFYLRSRGLNDYDARHLLIDAFAAEILD 431
>gi|328543979|ref|YP_004304088.1| FeS assembly protein SufD [polymorphum gilvum SL003B-26A1]
gi|326413723|gb|ADZ70786.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
Length = 440
Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats.
Identities = 86/422 (20%), Positives = 139/422 (32%), Gaps = 34/422 (8%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYY---AAPKSIVGPQSLDDVDPELLRTYE 113
R A+ R+ P R + DL Y AAP + E Y
Sbjct: 36 LRNAAFDRFSQTGLP---HRRVEEWKYTDLRAYMKGAAPLADPVTAQAAGPALEAADAYG 92
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
L E+ L VA + ++ L +GV I++ + D
Sbjct: 93 GL-----ERFRLVLANGRLVAELSDLNA----------LDAAGVTVRDINDGLAN-SDAA 136
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K + G N LN+A+ G V + G R + G F R I
Sbjct: 137 KLLQCPAIAQG-NALVDLNTALVQGGVTVAVEAGRRVDKPVEIVHLTVGAGAS-FSRCRI 194
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
EG+ ++ LE + AV + A + + G +
Sbjct: 195 ALGEGAELTLLESFASVGAGGE--TNAVSDYDLGKGAILASVRL--------MSGAGSHA 244
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V+ + + G+A GE + + + + + G Q D
Sbjct: 245 HVSTSFARLAGDAHLKTLGFVVGTAFARNQSFVSFAGEGARADLFGVTMVRGDQLADQTL 304
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H + SR K + G + Y+GK+ V A + +LL+
Sbjct: 305 VVDHAVPHCDSREYFKSVIDGRAKAVYQGKIIVRPHAQKTDGRMMTQALLLSEEAEMANK 364
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H AT+ +I ++ LFY RGIPE A L+V F+ E +++ E
Sbjct: 365 PELEIFADDVQCAHGATSGQIDEDLLFYLRARGIPEAEARTLLVLAFLSEAIEEFGSESV 424
Query: 474 VE 475
E
Sbjct: 425 TE 426
>gi|304311759|ref|YP_003811357.1| FeS assembly protein [gamma proteobacterium HdN1]
gi|301797492|emb|CBL45712.1| FeS assembly protein [gamma proteobacterium HdN1]
Length = 456
Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/420 (16%), Positives = 142/420 (33%), Gaps = 27/420 (6%)
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR-TYEKLGI 117
A TM+ P + + L Q +D P+ L + + +
Sbjct: 41 RAARAHLQTMRFPD---RKTENWKYTALNTL---NQSELWQPIDAAQPKALPLPNDAITL 94
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ +L G ++ S S + L+ + + E P L
Sbjct: 95 DCAARLVLRGGSVQLIS------SSSGAPVSADILEVRALESLNADEQARYLPKLALGET 148
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE-RTLIIAD 236
+ + L A V + + + + R L++ +
Sbjct: 149 WQT-----HPFVQLCEANLHKSWVVIVKSRQILEKPIVIEQWFDSATATTNDLRVLVVVE 203
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ + ++ + + L +++++ DNA++++ +Q Q
Sbjct: 204 SEAQATLVQITDSSENAAASLQMSLLQIHLHDNAQLQHVQLQLADEQCQQICTTQTQL-- 261
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G ++ + G+ + L + + E Y +S Q +D+ +
Sbjct: 262 ------GRDARYRHYNVLLGTNLLRNDLHLLFNDKGAEAELYGAFLSKHNQHVDNHLNLE 315
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H++ S KG+ S + G++ +H A + +LL+ T P +
Sbjct: 316 HVSGYCQSTTQYKGLVTDRSRAIFNGRIHIHPHAIKTDAQLNNKNLLLSREAEIDTKPEL 375
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H A+ ++ D LFY RGI A A++ GF+ E+++KLP+ VEA
Sbjct: 376 EIYADDVKCAHGASIGQLDDRSLFYFESRGIDRSTAEAMLSFGFINEIIEKLPIPSLVEA 435
>gi|262196468|ref|YP_003267677.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
gi|262079815|gb|ACY15784.1| FeS assembly protein SufD [Haliangium ochraceum DSM 14365]
Length = 467
Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 165/438 (37%), Gaps = 32/438 (7%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
P W+ E R A R L P+ W ++ D Y A + D D
Sbjct: 30 PAWLGELRAAA-RDVLAAGLPTNKHEGWRFTPLRGLN--DRAYADAGARDLDASEGVDGD 86
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
++G+P +L + A+ V + T + + +E
Sbjct: 87 ALRAWANAEIGLPDDAPALLLVDGRPLLPGGALPAGVELSTLAQ-------LCASEAAEG 139
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
E +L K L V + ++ALN+A+F D V + + L N G+
Sbjct: 140 SAELAELAAKNLGRVAKLE--TFSALNAALFADALIVRLSEDA-ADRPLHIAHIANRSGS 196
Query: 226 ---GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
+ R L+ EG+ +E QL AV E+ +AE+++ V +
Sbjct: 197 DAGAAYPRVLVAVAEGARACVVESVLGRAEAP-QLACAVTEITLAPSAELEHVRVHHHSG 255
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
Q V + + S + G ++ + ++ E +
Sbjct: 256 IALQQ-------VARVAVRQDQGSSYRSRVVTLGGKLSRLDLDVAMTAPEARCELDGVYH 308
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ + +D T + H A +S+ +GI A + + G + V + A HS + +L
Sbjct: 309 AGRGEHLDHYTTIDHQAPRCSSQERYRGIIAETGHAVFDGTIMVQQDAQHSDAHQENRNL 368
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
L+ ++ HT P++ + H AT + D LFY RGI ++ A A++ FVR
Sbjct: 369 LLDDDAVVHTKPHLRIDADDVSCSHGATVGSLDDAQLFYLRSRGIGDDQARAVLTFAFVR 428
Query: 463 EVLQKL---PMEFAVEAQ 477
E++ ++ P+ A+ AQ
Sbjct: 429 ELIDEIGCAPLREALSAQ 446
>gi|126668347|ref|ZP_01739305.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126627163|gb|EAZ97802.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 428
Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/430 (18%), Positives = 154/430 (35%), Gaps = 41/430 (9%)
Query: 54 MLEWRLL---AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
+LE R A + M P+ + + S+ + D++ L
Sbjct: 23 LLELRKQKGTAL---VDMPLPT---RKTENWKY----------SVRHLKLSDELAVALPS 66
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
++ G S VF + +V + +G+ + +
Sbjct: 67 LGKE------------GTSLSMAGYRVVFRNGVMVPEASDFPDFNGIRIQRFCDLDDQDA 114
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-FE 229
+ + L + A LNSA F DG F+ + K L + G +
Sbjct: 115 AALAERLDNTLDSQTVQMARLNSARFEDGLFIQLDKEAVLDQPLFIIHEVTASSVGSAYP 174
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R + A S ++ +E + E + V E + A I + +G
Sbjct: 175 RIYVDAARHSQMTLVEEYMSSG-SEPVMVNTVTEFFLAEGARITSVRL--------TLEG 225
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ G + S+ + G + L GE + + + ++ G Q
Sbjct: 226 ESVQHIGATGVRQATASRFESHCVGFGGPLRRHDLQVRLEGEGAECKLNGVVVTQGKQHY 285
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D+ T + H+A + S + I+AG S+ + G++ +H+ A S +LL+
Sbjct: 286 DNHTSIEHIAAHCDSEETYRNIAAGQSHAIFNGRIHIHQDAQKSNANMSNKNLLLSTGAE 345
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P +E H AT +++ LFY + RG+ A L+ F+ E+++++P
Sbjct: 346 IDTKPELEIYADDVKCAHGATIGQLNKTSLFYLVSRGVGRREANTLLTIAFINELVEQIP 405
Query: 470 MEFAVEAQKL 479
+E EA +L
Sbjct: 406 VEAVREAVQL 415
>gi|254466136|ref|ZP_05079547.1| SufBD [Rhodobacterales bacterium Y4I]
gi|206687044|gb|EDZ47526.1| SufBD [Rhodobacterales bacterium Y4I]
Length = 426
Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats.
Identities = 89/433 (20%), Positives = 148/433 (34%), Gaps = 46/433 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R TM PS R + + D P + +E+L I
Sbjct: 30 REAALSRVQTMGLPS---RRDEYWKYTKPDTLVQADAPKAAVFNADEAP-MFSAFERLNI 85
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V VD VFD+ + ++L GV I + C+ K
Sbjct: 86 ---------------VFVDGVFDAEA-----SDDLSLEGVTIDRIEDICCKDIHWAKDLY 125
Query: 178 S----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ AALN+A TDG + + + ++ + +++ + +I
Sbjct: 126 GVLEARGQTPVERPLAALNTAFATDGVAIRVTG--KVSKPINFTYVHSDENSDAILHHVI 183
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ G+ V+ LE A R +E+ D ++ Q G + +
Sbjct: 184 RVETGAEVTILENGPAASRF-----NKCMEIDIADGGKLHLVRAQ----GRDHERRAATH 234
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G S L +T L G+ + + +G D
Sbjct: 235 LFAR----LGTESVFKSFTLTVNGVLTRNEAVIELTGDDAVAHIAGACVGDGDFHHDDTV 290
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 291 FITHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQFLAK 350
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H +T+ I DE LFY RG+P A L+ F+ E ++++
Sbjct: 351 PELEIYADDVACSHGSTSGAIDDEGLFYLRSRGVPHAEATDLMTLAFLAEAVEEIED--- 407
Query: 474 VEAQKLIDISLEG 486
E I LEG
Sbjct: 408 AEIAADIVSRLEG 420
>gi|89054849|ref|YP_510300.1| SufBD [Jannaschia sp. CCS1]
gi|88864398|gb|ABD55275.1| Iron-regulated ABC transporter permease protein SufD [Jannaschia
sp. CCS1]
Length = 430
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/423 (17%), Positives = 143/423 (33%), Gaps = 45/423 (10%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A R M P+ R + D + D + L + ++L
Sbjct: 26 EARKAALARVREMGLPT---RRDEYWRYTDPSSLTQAGAPRAAVFHDPNEAPLFKDIDRL 82
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+ V VD VFD+ ++L +G+ +++ + + K
Sbjct: 83 KV---------------VFVDGVFDAEK-----SDDLSIAGLEIERLADVLSKDIHWAKD 122
Query: 176 YLSTVVPVGDNFYAA----LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
T G + A LN+A TDG + + ++ + ++ +
Sbjct: 123 LYGTQEAAGQDPVARPLAALNTAFATDGIVIRA--TAKAEKPVALIYLHRDETSDAILHH 180
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+ + G+ ++ LE A R +E+ D + Q G + +
Sbjct: 181 LVRVETGAELTVLEVGPAAARF-----NKCMEIDVADGGAFHHVRAQ----GRDHERRAV 231
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ + G + T + G + A+ +
Sbjct: 232 THMFAR----VGEEALYKSFTTTANGVTTRNEHVIEIVGNNAVAHVAGAALGDARNAAFH 287
Query: 352 GTKMLHLAK---NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+ + N SR V K + + ++GK+ V GA + + +LL+ ++
Sbjct: 288 HDDTVFITHDAVNCESRQVFKKVLRNGAEGVFQGKILVKEGAQKTDGYQISQALLLDDDS 347
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H +TT I +E LFY RG+P + A L+V F+ E ++++
Sbjct: 348 SFQAKPELEIYADDVICSHGSTTGAIDEEALFYLRSRGLPTDQATDLLVLAFLAEAIEEI 407
Query: 469 PME 471
E
Sbjct: 408 ADE 410
>gi|258647680|ref|ZP_05735149.1| putative ABC transporter protein [Prevotella tannerae ATCC 51259]
gi|260852509|gb|EEX72378.1| putative ABC transporter protein [Prevotella tannerae ATCC 51259]
Length = 451
Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats.
Identities = 92/435 (21%), Positives = 166/435 (38%), Gaps = 27/435 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A P+ RY + D+ AP + + +
Sbjct: 26 MNNRREEAAALLTEKGLPTAKTERY---KYTDVEAAFAPDFGLNLKRIP----------- 71
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
L I E V D+V+ + L G+I + + P+L+
Sbjct: 72 -LEIDPYETYRCTIEHLGAWNYYVVNDTVAPASHDSAAL-PQGIIVDSLVNVAAKRPELL 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTL 232
+K+ + ALN+ + DG +YIP GV + R L
Sbjct: 130 EKFYHQAAGKSYDGVTALNTLLAQDGLLIYIPSGVEAERAVQIVNVSASTIDFMSNRRVL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+ +E + + L C + L VVE+ A AE+ V + +
Sbjct: 190 IVLEENAKATVLF-CDHALEGRHYLTTEVVEVFAEQGAELDMYAV--------EETDFVN 240
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ +SK+++ + + ++ + L GEQ+ Y +++G +++D+
Sbjct: 241 TRFCNVYIEQASKSKVTYCNMTLHNGVSRNTVNVRLNGEQAEVNTYGAVVADGKERVDNN 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H+ + TS ++ K + + + GKV V GA H+++ D+L + + A
Sbjct: 301 LLIDHVGEGCTSDMLYKYVLDDNAVGAFAGKVLVEPGAQHTQSQQTNDNLCVSQHARAFA 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME- 471
P +E H +T K+ LFY QRG+PE+ A L+ + F+ +VLQ++ ME
Sbjct: 361 QPMLEIYADDVKCNHGSTVGKLDANALFYMQQRGVPEKEASLLLQHAFINDVLQRIKMET 420
Query: 472 FAVEAQKLIDISLEG 486
LI+ G
Sbjct: 421 LRDRLSYLIEQRFRG 435
>gi|149914903|ref|ZP_01903432.1| FeS assembly protein SufD, putative [Roseobacter sp. AzwK-3b]
gi|149811091|gb|EDM70928.1| FeS assembly protein SufD, putative [Roseobacter sp. AzwK-3b]
Length = 428
Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 148/443 (33%), Gaps = 44/443 (9%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W R A R P R + + + D P +
Sbjct: 25 AWSNAARDAALARVRNAGLP---HRRDEYWKYTNPETLVQADAPEAALFQSDDTP-IFNG 80
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
++L I V VD VFD+ + ++L GV +S+A
Sbjct: 81 IDRLKI---------------VFVDGVFDAEA-----SDDLSLEGVKIERLSDAASVDIH 120
Query: 172 LVKKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
K AALN+A+ TDG +++ + ++ + +
Sbjct: 121 WAKDLYGVLEERGQTPVARPLAALNTALATDGVVIHVTG--KVSKPVNLIYHHRSTSSDA 178
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+I D G+ ++ LE A R V+E+ D A + Q G
Sbjct: 179 ILHHVIKMDPGAEMTVLENGPAAARF-----NKVMEVEVADGARFHHVRAQ----GRDHE 229
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ + T+ S L +T L G+ + + +G
Sbjct: 230 RRAATHVFTR----LAEESVFKSFTLTANGVLTRNECIIELTGDNAKAHVAGACVGDGDF 285
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D + H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 286 LHDDTVFITHDAVNCESRQVFKKVLRNGARGVFQGKILVKPGAQKTDGYQISQSLLLDGD 345
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
P +E H +T+ I +E LFY RG+P + A L+ F+ E +++
Sbjct: 346 SEFDAKPELEIYADDVACSHGSTSGAIDEEGLFYLRARGVPRDIATNLLTLAFLAEAVEE 405
Query: 468 LPME-FAVEAQKLIDISLEGSVG 489
+ + E ++ LE G
Sbjct: 406 IEDDGLRDEIVGRLEGWLERRRG 428
>gi|209885129|ref|YP_002288986.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|209873325|gb|ACI93121.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 439
Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats.
Identities = 81/420 (19%), Positives = 152/420 (36%), Gaps = 32/420 (7%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P R + DL + + P D + +GI
Sbjct: 38 RKAAFEDFTSRGLP---HRRIEEWKYTDLRALLRAVAPLAPVPGDAALALAAKAQAAIGI 94
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ L GV K++ A+ V + +E L V + + A
Sbjct: 95 ENATRLTLVDGVLAPKLSDLALLPKGVRVRSLRESLAAGAVDLLKTTFAA---------- 144
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ + N A+ TDG V + GV L R+ I
Sbjct: 145 ---------DAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIG 195
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ + V+ +E A Q+H V ++ D++E+++ + + +
Sbjct: 196 KKACVTLVESFVAAGATAYQVHDQV-DISVGDDSELQHIRLMEDARDAANITTAAFTL-- 252
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G R K++ L G+A++ GE S + + G + D+ +
Sbjct: 253 ------GARVKLNTFGLNQGAAVSRYQGFISFLGEDSELSTNGVNLLGGRRHADTTLVVN 306
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N TSR + + + S + ++G++ V + A + +LL+ + A P +
Sbjct: 307 HAVPNCTSREIFRAVLDDQSRSVFQGRIIVQQDAQKTDGKMMTRALLLSDEAEADNKPEL 366
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H AT + +E LFY RG+PE A +L+++ FV E ++ + + E
Sbjct: 367 EIFADDVACGHGATAGALDEELLFYLRARGLPENEAQSLLISAFVGEAIESIVDDGLREL 426
>gi|294675013|ref|YP_003575629.1| FeS assembly protein SufD [Prevotella ruminicola 23]
gi|294472044|gb|ADE81433.1| FeS assembly protein SufD [Prevotella ruminicola 23]
Length = 451
Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats.
Identities = 91/453 (20%), Positives = 169/453 (37%), Gaps = 41/453 (9%)
Query: 47 KKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
K+ P+ M R A+ + P+ RY D L +P
Sbjct: 19 IKHAPESMNVVRDQAFEDFRKQGFPTKKVERYKYTDMQKL-----------------FEP 61
Query: 107 ELLRTYEKLGIPIREQEIL-AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
+ +L IP+ E V ++ V + + ++ GV+ +
Sbjct: 62 DYGVNLNRLQIPVDPYEAFHCDVPNLSTSLYFVVNDMFYHDDKQKGHLPEGVVIGSM--- 118
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR------ 219
++P+LV KY + + G++ ALN+ + DG VY+PK V+ +
Sbjct: 119 -RDYPELVSKYYTKLAKTGEDAVTALNTMLAQDGLLVYVPKNVKVDRAIQVINILKATPQ 177
Query: 220 ---INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
R LI+ +E + + L C D N L V+E +NA +
Sbjct: 178 NAQHVVTDLMVNRRVLIVLEESAEIKMLF-CDHAADDRNFLATQVIEAYVGENASLD--- 233
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
Y + + V+ + S+++ + + IT GE + +
Sbjct: 234 ---LYCMEETHHKNV--RVSNVYIDQQANSRVNHNVITLHNGITRNKLDLTFSGEGAECQ 288
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
Y I++ Q +D+ T ++H + S+ + K + + + G+V V GA + +
Sbjct: 289 CYGCVIADKQQHVDNNTLIVHKVPHCNSQELYKYVLDEKATGAFAGRVLVEHGAQKTTSQ 348
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+L +T P +E H +T +++D LFY QRGI + A L+
Sbjct: 349 MTNQNLTATKEARMYTQPMLEIYADDVKCAHGSTVGQLNDAALFYMRQRGISLQEAKVLL 408
Query: 457 VNGFVREVLQKLPME-FAVEAQKLIDISLEGSV 488
N F+ EV+ + +E L++ G +
Sbjct: 409 QNAFINEVIDHMQLEPLRDRLHYLVEKRFRGEL 441
>gi|298372247|ref|ZP_06982237.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
gi|298275151|gb|EFI16702.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
Length = 446
Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 181/434 (41%), Gaps = 29/434 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ ++R ++ + P Y + ++ ++ +
Sbjct: 23 LNKFRDASFAEFEQKGFPDKKTEAY-----------------LNSSLIETLNTDYDVKIH 65
Query: 114 KLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+L I + ++ + + A+ + + + + GV F +S+A +P++
Sbjct: 66 QLDIDTSQNQLFQCKIPSINAALGFMLNDKFYMADDQRRSLPEGVEFCALSDAERLYPEV 125
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY-FRINEKGTGQFERT 231
V +YL T+ + A NS +G F+Y+ K L ++E F
Sbjct: 126 VGRYLHTLSDKSRDAMTAFNSTFVQNGYFIYVKKNTVADKPLQLINMLLSEAPMIAFTHN 185
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
LI+ ++G+ + L C + + + V E+V D A +Y +++N +
Sbjct: 186 LIVVEQGASLQLLV-CDHAEEGVDFFASKVTEVVVGDGARFEYYSLENTTRKANNLMQ-- 242
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
FVT+ G S++ L +A++ + + GE + + IS+G Q+ ++
Sbjct: 243 -MFVTQ-----GNNSQVIVNNLLLLNAVSRNQITADIDGENASLFLGGMLISDGTQEAEN 296
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H N+TS + K I S+ + G + V + A + + S+ + +
Sbjct: 297 NTIIRHNQPNSTSNELFKYILDERSHGIFSGIIVVEKDAQKTLSRQTNKSICLTPEAVVN 356
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H ATT ++ +E LFY QRGI ++ A ++++ FV++V+ ++ ++
Sbjct: 357 SRPQLEIYADDVKCGHGATTGQLDNEALFYMKQRGIDQDTARMMLLSAFVQDVIDEIHID 416
Query: 472 FAVE-AQKLIDISL 484
+ + +ID L
Sbjct: 417 VLRDKMKDMIDRRL 430
>gi|270261597|ref|ZP_06189870.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|270045081|gb|EFA18172.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
Length = 428
Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats.
Identities = 74/423 (17%), Positives = 141/423 (33%), Gaps = 48/423 (11%)
Query: 61 AYRRWL---TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
A W + P+ ++ + L G ++P+ E +
Sbjct: 31 ALAHWQQALRLGWPT---RKHENWKYTPL---------EGLLEQQFLEPQA----EPIAA 74
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
R+ L V VD F++ + E + V +A+ E
Sbjct: 75 AQRDALALNLDAYRLVFVDGRFNAALSDSDLGEY--QFEVTPYGTPQALPE--------- 123
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-----GQFERTL 232
P+ + L ++ + S + + G L + +G R
Sbjct: 124 ----PIQPEIFLHLTESLAQETSMIRVAAGKIAARPLYLLHISSGRGAEGEVNTVHHRHH 179
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ + +E + + A + + DNAE+++ + + Y
Sbjct: 180 LDVGRNARAEVIEHYVSLNDAAHFTGARLTASI-GDNAELRHCKL-------AFESQASY 231
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+F G +++ G+ +T S L GE S S+ + G D+
Sbjct: 232 HFAHN-DLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGSNLVINSLVLPVGKDVCDTR 290
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H SR + K + + + + G + V + A + +LL+G T
Sbjct: 291 TYLEHNKGYCESRQLHKTVVSDRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDT 350
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H AT +I +E LFY RGI + AA +I+ F E+ + + +
Sbjct: 351 KPQLEIYADDVKCSHGATVGRIDEEQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIGNDV 410
Query: 473 AVE 475
E
Sbjct: 411 IRE 413
>gi|296116549|ref|ZP_06835159.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
gi|295976761|gb|EFG83529.1| FeS assembly protein SufD [Gluconacetobacter hansenii ATCC 23769]
Length = 422
Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats.
Identities = 85/428 (19%), Positives = 144/428 (33%), Gaps = 46/428 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYA-APKSIVGPQSLDDVDPELLRTYEKLG 116
R A P R A + L ++A P + Q LL T E +
Sbjct: 25 RRAAAAFLTQAGLP---RAGVEAWKYTSLRHFADVPYATPPAQVDAAEVARLLATVETVS 81
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ V A + VT F +
Sbjct: 82 GLGAGTSRIVLVNGRFDASLSRLPQGVHVTAFAAD-----------------------PV 118
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC-PMELSTYFRINEKGTGQFERTLIIA 235
+ + + ALN+ + DG+ V + GV + L + + R I
Sbjct: 119 FADWIDPCGDVGTALNTVMADDGAVVRVDAGVDAGALLLVSIAVAGDAPISFHPRHRIDL 178
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G+ ++ LE A N LH V E+ + A + ++ +Q G + + +
Sbjct: 179 GAGARLAVLE---ATVGVGNYLHNPVFEVRVTEGARLTHARLQ--AEGQQASQIAVTH-- 231
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
L G+ ++ L GE++C + + Q D + +
Sbjct: 232 ----AQVASDGLYDSFNLTLGALLSRHEVHAALLGERACVHVNGAQLLDAKQHGDLSSII 287
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A N SR K + AG + ++GK+ V R A + + +LL+ + P
Sbjct: 288 THAAPNCVSRQTVKNVLAGHARGVFQGKIHVERIAQKTDGYQMNQALLLSDTAEIDAKPE 347
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP------ 469
+E H AT I E LFY RGI A ++++ F+ +V+ L
Sbjct: 348 LEIYADDVKCSHGATVGAIDPEQLFYLRSRGITLSDARSMLIRAFLHDVVHLLEDTRLRD 407
Query: 470 -MEFAVEA 476
++ AVEA
Sbjct: 408 SLDLAVEA 415
>gi|158425237|ref|YP_001526529.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158332126|dbj|BAF89611.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 445
Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 82/422 (19%), Positives = 150/422 (35%), Gaps = 29/422 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A + P+ R + DL V D E +++ L
Sbjct: 39 ELRRAAATAFSEGGLPT---RRVEEWKYTDLKAILR--DAVPLAGPLDASAEAEGSFKAL 93
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+P ++ + ++ A D + +SG+ +P+ AI + L ++
Sbjct: 94 TVPGAKRILFVNGALARPASDLL-------------ALESGIAALPLESAIASNDPLAER 140
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-TGQFERTLII 234
+ + P + ALN+ +G V + G + L + R +++
Sbjct: 141 -IGALQPQRYDAPLALNTVFLGEGLLVRVAAGAKIAAPLHIANVFTGDDPVATYGRVVVV 199
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
++G+ V+ +E Q + A+ EL D A + VQ
Sbjct: 200 VEDGAEVTLVESFQGRDGVAYQTNTAL-ELFVGDGAHVDLVRVQEEGDAALHLS------ 252
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G +++ L +G+ + G+ S + G Q D+
Sbjct: 253 --TVMVEIGREAQLHTFALNSGAKASRTSLYGRFGGQHSHAGLRGANLLKGKQHQDTTLL 310
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + SR + K + A S+ ++GK+ V A + +LL+G P
Sbjct: 311 LDHAVPHCESRELFKTVLADESHGVFQGKIVVRPDAQKTDGRMMSRALLLGEAAEMDNKP 370
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + ++ LFY RGIP+ A AL+V FV E ++ + E
Sbjct: 371 ELEIFADDVQCGHGATAGDLDEDLLFYLKARGIPQRQAEALLVQAFVGEAIEFVENEALR 430
Query: 475 EA 476
E
Sbjct: 431 EL 432
>gi|154248387|ref|YP_001419345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154162472|gb|ABS69688.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 154/434 (35%), Gaps = 36/434 (8%)
Query: 55 LEWRL-----LAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
L+ RL A + P+ R + DL AA + E
Sbjct: 33 LDGRLGELSADALEAFRAHGLPN---RRVEEWKYTDLR--AAVRDFPPLAGSPGTAAEAE 87
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
+ L +P L V + + F + +GV +P+ A H
Sbjct: 88 AASQTLDVP--HAARLLFVSGALARGASDFAGLP-----------AGVSALPLDAAKAAH 134
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-GQF 228
LV + + ++ P + ALN+ +G + + G R + + + F
Sbjct: 135 DPLVDR-IGSLQPDRYDGALALNTGFLGEGLVMKVDAGTRAAKPVHLAYVFPAEEAVAGF 193
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
RT+++ +G+ ++ +E T + +ELV D A + +Q
Sbjct: 194 TRTVVVVGDGAELTLVESFTG-REGVAYQANHAMELVVGDGATVNLVRLQEEGASALHLG 252
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ G +K++ L G+A++ +G + + G Q
Sbjct: 253 TLMVEL--------GRAAKLNVFSLVQGAALSRYSVYGRFQGTGTNLGVRGATLLKGRQH 304
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D+ + H SR + K + + ++ ++GK+ V R A + SLL+ +
Sbjct: 305 ADTTMFIDHAVAGCESRELFKTVLSDEAHGVFQGKIVVRRDAQKTDGRMMSQSLLLSDGA 364
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H AT + D+ LFY RG+P + A L++ FV E ++ +
Sbjct: 365 EMDNKPELEIFADDVQCGHGATVGTLDDKMLFYLRSRGLPLKEAERLLIQAFVGEAVEFV 424
Query: 469 PMEFAVEAQKLIDI 482
E E LI
Sbjct: 425 EDEALREI--LIAR 436
>gi|76801400|ref|YP_326408.1| Fe-S cluster assembly protein ABC transporter permease
[Natronomonas pharaonis DSM 2160]
gi|76557265|emb|CAI48841.1| ABC-type transport system permease protein (probable Fe-S cluster
assembly protein) 2 [Natronomonas pharaonis DSM 2160]
Length = 405
Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats.
Identities = 94/427 (22%), Positives = 179/427 (41%), Gaps = 61/427 (14%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI-DFDDLYYYAAPKS 94
++E +R IS + +EP+W+LE RL A + P + + +DL Y
Sbjct: 9 IDEATVRQISDELDEPEWLLETRLEALEALEELPFPDVIQTPGRKWTNLEDLDYEVLVDP 68
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ + D V P+
Sbjct: 69 LDAAEEKDQVGPDT---------------------------------------------- 82
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
V +P +EA+ EH DL++++ +VV N+ AL++A+FT G+ VY+P+G
Sbjct: 83 --VDVLPFAEAVDEHGDLLEEHFGSVVDPETNYLTALSTALFTTGTVVYVPEGTDAED-- 138
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE-NQLHAAVVELVALDNAEIK 273
R F TL++A+E S V+ LE + + N+ ++ + E+VA +N+ ++
Sbjct: 139 -VTIRTKMNSRSLFNYTLVVAEESSSVTILERQESGDEVDGNRYYSGLTEVVAGENSYVQ 197
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+ +Q+ Y + + + ++W + GS +T L G+ S
Sbjct: 198 FGNLQDLD-------QTTYTY-SLKEAAIDTYGNVNWIECNIGSKLTKSSVESYLDGDSS 249
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ + Q +D ++ H A++TT+ +V++G+ + + Y G V A +
Sbjct: 250 ESKIVGAFYGHDDQHLDIDARVWHTAEHTTADLVTRGVIDDEARSVYEGVQDVGADAWDT 309
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
++ + ++L++ + A P + N H AT ++S E +FY R +PE A
Sbjct: 310 NSYQRENTLMLSDESEADASPKLIINNHDTEASHSATVGQVSAEEMFYMTSRALPERLAK 369
Query: 454 ALIVNGF 460
++V GF
Sbjct: 370 NMLVEGF 376
>gi|116619109|ref|YP_819480.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116097956|gb|ABJ63107.1| Fe-S cluster assembly ABC-type transport system, permease component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 394
Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats.
Identities = 83/424 (19%), Positives = 159/424 (37%), Gaps = 43/424 (10%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
++ P++A++RY + D++ I +E+
Sbjct: 8 QSLPLPTFAKVRYSSWQLDEM------------------------------IAAKEETTT 37
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ + V V + +++ GVI M +++A EHP LV+K L +V+
Sbjct: 38 SYFTENNVHGIEVSGLSTTYQQLSDDMIARGVILMNMAQAQIEHPALVEKLLGSVISKTA 97
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIADEGSYVSYL 244
+ +A N A F G FVYIP+ V+ L + G R + + V L
Sbjct: 98 DRLSAQNFAQFNTGIFVYIPENVQFDDVLHLSLNHLAISGEDFVARIFVYVGANAKVDIL 157
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ + + V+E VA A++ Y+ + + R
Sbjct: 158 QEMHTIG-TQKTKASVVIEAVADVGAQVTYANIDAFGEQ--------TTAFINREVEVRD 208
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W E + L GE + I ++ Q T +L+ ++T
Sbjct: 209 HATVDWQNAEFNDGNVIIRLASQLNGEGATSHTNVIGLTTKKQTQGLVTTILNRGRHTIG 268
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I +G+ S + G + +GA S + L++ P + +
Sbjct: 269 HIFQRGVILNRSTLVFNGIGKIIKGAKGSDAQQESRVLMLSRRARGDANPLLLIDENDVT 328
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
H A+ ++ + ++Y + RGI E+ A L++ GF+ EVL K+P + A Q+ + +
Sbjct: 329 AGHAASVGRVDENQMYYLMSRGISEQVARKLVIRGFMGEVLAKMPTKVA---QRQVVEEI 385
Query: 485 EGSV 488
E +
Sbjct: 386 ERKL 389
>gi|16331746|ref|NP_442474.1| hypothetical protein slr0076 [Synechocystis sp. PCC 6803]
gi|3024874|sp|Q55792|Y076_SYNY3 RecName: Full=UPF0051 protein slr0076
gi|1001707|dbj|BAA10544.1| slr0076 [Synechocystis sp. PCC 6803]
Length = 453
Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats.
Identities = 77/426 (18%), Positives = 156/426 (36%), Gaps = 37/426 (8%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
++ R A +++ P R F DL A + + DV E
Sbjct: 40 LVNKRQGAADLLGSLRLP---HKRDEEWQFTDLSELKAIDFVAAGKVSLDVAAA-----E 91
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+P Q L V ++ F T S + + + +
Sbjct: 92 NFYLPEAHQSRL-------VFINGFFTPELSNTN----DLPSAITCQSWTNLAAHQREQL 140
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERT 231
YL + ++ LN+A TD + V+IP + F T R
Sbjct: 141 ANYLGQKTDGNE-VFSNLNTAGMTDSAVVWIPANTELKSPIHLLFLTVVDPTPIMVQPRL 199
Query: 232 LIIADEGSYVSYLE-------GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
L++ + + V+ E CT + + + V E+ +NA++ + Q
Sbjct: 200 LVVVENNAQVTIAESYGAISTNCTDRPQQQPYFNNIVSEIYLGENAQVTHIRNQR----- 254
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
G ++ T +G +S+ + G+ ++ + E + EF ++ I
Sbjct: 255 --DSGDSFHIATT-AIAQGKQSRYRLIDVNLGAKLSRHNLQMTQQEEATKTEFLALTILA 311
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G Q D+ + + + + + K I ++ + GKV V + A + +L++
Sbjct: 312 GRQVSDTHSTIALNHPHGATNQLHKCIVDEYAQAVFSGKVLVPQAAQLTNAQQLNRNLVL 371
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ +T P ++ + H AT S++ + +FY RG+ + A L+++ F E+
Sbjct: 372 SSKARINTKPELQITADNVKCSHGATISQLEADEVFYLRSRGLNDYDARHLLIDAFAGEI 431
Query: 465 LQKLPM 470
L ++P+
Sbjct: 432 LDQIPL 437
>gi|281424961|ref|ZP_06255874.1| FeS assembly protein SufD [Prevotella oris F0302]
gi|281400805|gb|EFB31636.1| FeS assembly protein SufD [Prevotella oris F0302]
Length = 447
Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats.
Identities = 87/452 (19%), Positives = 173/452 (38%), Gaps = 32/452 (7%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
++I+ SA EP + R A+ + P+ RY + D+ AP +
Sbjct: 16 EMIKSHSA---EP--LNAVRDRAFADFKAQGFPTRKVERY---KYTDMAALFAPDYGLN- 66
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
+L IP+ + V ++ + + + +GV
Sbjct: 67 -------------LNRLAIPVNPYDAFKCDVPNLSTSLYFIVNDSFYSQKLPQVQLPAGV 113
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I + E PD + KY + + ++ ALN+ + DG FVY+PK V+ +
Sbjct: 114 IVDSLRHIAAEKPDFIAKYYARIAATHEDAVTALNTMLAQDGLFVYVPKNVKVDRTIQII 173
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+ R +++ E + L C D L V+E DNA ++ + +
Sbjct: 174 NILRADVDLMVNRRVLVVMEQGAEAKLLFCDHATDDRKFLSTQVIEAYVGDNASLELNCL 233
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+ + + + +Y + S+++ + + +T + +GE +
Sbjct: 234 EETHLKNVRVS-NVY-------IEQQANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHC 285
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
+++ Q +D+ T + H + TS + K + + + G+V V GA + +
Sbjct: 286 NGCVVADKQQHVDNNTLIDHQVPHCTSNELYKYVLDENAVGAFAGRVLVRHGAQKTISQE 345
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+L + +T P +E H +T +++D LFY QRGI + A L+
Sbjct: 346 TNQNLCVTKTARMYTQPMLEIYADDVKCAHGSTVGQLNDAALFYMQQRGISLKEAKLLLE 405
Query: 458 NGFVREVLQKLPME-FAVEAQKLIDISLEGSV 488
F+ EV+ K+ +E L++ G +
Sbjct: 406 FAFINEVIDKMELEPLRDRLHHLVEKRFRGEL 437
>gi|84686882|ref|ZP_01014766.1| FeS assembly protein SufD [Maritimibacter alkaliphilus HTCC2654]
gi|84665079|gb|EAQ11559.1| FeS assembly protein SufD [Rhodobacterales bacterium HTCC2654]
Length = 434
Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats.
Identities = 85/414 (20%), Positives = 148/414 (35%), Gaps = 42/414 (10%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W+ E R A R M P+ R F P L+ P
Sbjct: 30 AWITEARKSALGRLEAMGLPAP---RDEYWRFT------------KPDLLNAPKPAPAAV 74
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
++ E+ + V VD VFD+ ++L +GV ++EA
Sbjct: 75 FDHGDEMPVFGEV---DRIKIVFVDGVFDAAQ-----SDDLTLAGVEIDRLAEAAKADIH 126
Query: 172 LVKKYLSTV----VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
K TV + AALN+A TDG + + + +S ++ + +
Sbjct: 127 WAKGVFGTVELASQTPVERPLAALNTAFATDGVLIRVTG--KAAKPISLIYKHEDDCSDA 184
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
++ + G+ ++ LE A R +E+ D A + Q G
Sbjct: 185 ILHNVVKLEPGAELTLLENGPAAARF-----NKCLEVDIADGARFHHIRAQ----GRDHE 235
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ + + +G S L +T ++G + A+ +G
Sbjct: 236 RQAVTGMFVR----QGAESLFKSFTLTANGRLTRNESFIEMKGANASAHIAGAALGHGDF 291
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D + H A+N SR V K + + ++GK+ V RGA + + + SLL+ +
Sbjct: 292 HHDDTVFITHDAENCESRQVFKKVLQKGAVGAFQGKILVKRGAQKTDGYQKSQSLLLDDE 351
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
P +E H +T+ I ++ LFY RG+ + A+ L+V FV
Sbjct: 352 AQFLAKPELEIYADDVACSHGSTSGAIDEDMLFYLRARGVDKGTAMDLLVIAFV 405
>gi|220925675|ref|YP_002500977.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
gi|219950282|gb|ACL60674.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
Length = 439
Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats.
Identities = 85/420 (20%), Positives = 148/420 (35%), Gaps = 27/420 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + P R A + DL AA + P + + G
Sbjct: 33 REEAFRFFEATGLP---HRRVEAFKYSDLR--AALREAAPPAEAPTPEAARNAVMKAEGF 87
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L V V + ++ GV P+ EA+ L +++
Sbjct: 88 ATIEAARLTFVNGHLVPALSDLGAMP-----------EGVEVTPLVEALTNGHPLTEQFT 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTLIIAD 236
V +N LN A DG+ + + G + L F + R L++ +
Sbjct: 137 P-VAQARENPIFQLNIAFMADGALIRVAAGAKVERPLHLRFVGTGAEAFSTATRILVVLE 195
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ ++ E P Q + A+ ++ D A ++++ +
Sbjct: 196 EGAELTLFESHEGPDGVAYQPNDALDAVI-ADGATLRHTRLNREGREAIALS-------- 246
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G ++ + + G+A + L GE + + Q DS
Sbjct: 247 TLSVKLGAKAHLETVNVVAGAAFSRHQLYLLFAGEDATATVNGATMLGNGQLGDSTLLAD 306
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A SR K + G + ++GK+ V + A + + D LL+ + P +
Sbjct: 307 HAATGGFSREQFKTVIDGEATGVFQGKIIVEQAAQKTDGKMKSDCLLLSDEGQMMNKPEL 366
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H AT + D+ LFY + RG+P A L+V F+ E ++ + E A EA
Sbjct: 367 EIFADDVACGHGATCGALDDDLLFYLMARGLPRGEAEGLLVQAFLGEAIEAISHEGAREA 426
>gi|27379452|ref|NP_770981.1| hypothetical protein blr4341 [Bradyrhizobium japonicum USDA 110]
gi|27352603|dbj|BAC49606.1| blr4341 [Bradyrhizobium japonicum USDA 110]
Length = 434
Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats.
Identities = 78/419 (18%), Positives = 153/419 (36%), Gaps = 34/419 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + P R + DL + + I
Sbjct: 35 RREAFETYERLGLP---HRRIEEWKYTDLRALVGEVLPLAAAPDTAALKRAADAVKAHAI 91
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ +L GV + ++ S T +E L+K + M S
Sbjct: 92 EGARKLVLVDGVFAADLSDVKALASEVGFKTLRETLEKDAALLMTAST------------ 139
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ ALN+A+ TDG + I G + + F R+ +
Sbjct: 140 ---------DAVIALNAALATDGVVLSIADGAQLSAPIQIIHIATAASASAFTRSQVAVG 190
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ + +E A Q+ AV+ + DNA++ + + + P +T
Sbjct: 191 NGARATIIESFVAAGAKAYQVSDAVI-VTIGDNADVAHIRLMDDAPDAVN--------IT 241
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ G +K+++ + +G+A++ L GE S + + + D+ +
Sbjct: 242 SQFVTVGANTKVNFFNMTSGAAVSRLQGFITLAGEGSDLAINGVNLLQKTEHGDTTLVVD 301
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N SR + + + +++ ++G++ V A + +LL+ + A P +
Sbjct: 302 HAVPNCVSREIFRAVIDDRAHSVFQGRIIVRPDAQKTDGKMMTRALLLSDEAEADNKPEL 361
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
E + H AT + D LFY RG+PE+ A AL++ FV E ++++ + E
Sbjct: 362 EIFADDVSCGHGATAGALDDSLLFYLKARGLPEKQAQALLIQAFVGEAIEQIADDGLRE 420
>gi|298291336|ref|YP_003693275.1| FeS assembly protein SufD [Starkeya novella DSM 506]
gi|296927847|gb|ADH88656.1| FeS assembly protein SufD [Starkeya novella DSM 506]
Length = 437
Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats.
Identities = 83/424 (19%), Positives = 149/424 (35%), Gaps = 30/424 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ + R A R + P R + DL V +
Sbjct: 30 LADLRRAAARSFEEHGLP---HRRVEEWKYTDLRTLMRDAVPVAGSAAVAEADARATA-- 84
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ E + + V + ++G+ ++ AI +++
Sbjct: 85 ---LREVEVRRIVVANGAVVPELSDLAG-----------LEAGLAVTTLAAAIASGDEVL 130
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE-RTL 232
+ ++P + ALN+A+ DG + + G + R+L
Sbjct: 131 -SRVGGILPGRYDAALALNTALAKDGVVLTVAPGAILERPIHVAHVFAGDAAAASYARSL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
++ G+ ++Y+E P +V E V D A + +Q Q G +
Sbjct: 190 VVVGAGAKLTYVESFEGP-EAIAYQANSVTEFVVGDEAHLDVVRLQ-------QEGGSAF 241
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ T D G +++ TG+++ L G+ S F A+ G Q DS
Sbjct: 242 HLSTILFDV-GRHAQVHAFTFATGASVARTSLYATLSGDASHVSFNGAALLKGRQHSDST 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H SR + K + S ++GK+ V + A + +LL+G +
Sbjct: 301 LFVDHQVPGCESRELFKTVLDDSSRGVFQGKIVVRQAAQKTDGRMMSRALLLGEDAEMDN 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H AT I +E LFY RGIP + A +L+V FV E ++ + +
Sbjct: 361 KPELEIFADDVACGHGATCGDIDEELLFYLRARGIPLKEAQSLLVQAFVGEAIETVKHDG 420
Query: 473 AVEA 476
EA
Sbjct: 421 LREA 424
>gi|284929291|ref|YP_003421813.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
gi|284809735|gb|ADB95432.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
Length = 443
Score = 216 bits (550), Expect = 8e-54, Method: Composition-based stats.
Identities = 75/437 (17%), Positives = 163/437 (37%), Gaps = 45/437 (10%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
+ + ++ + P+ + ++ +LY Y ++ + +
Sbjct: 33 LKQDSLQKIKELSFPTSKEEEWRFMNLAELYKY---------------QFKIAKATKITK 77
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I++ + V VD +D + G + + PD+ K
Sbjct: 78 ESIKDLVVSEANSNCIVFVDGQYDRALSDIALSSDDIFIGT--------LQDVPDIKKNE 129
Query: 177 LSTVVPVGDNF---YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG--QFERT 231
+ T++ N ++ LN+ D + + + + + + F ++ RT
Sbjct: 130 IYTLLNSDQNKKDIFSRLNTIGLVDPAIIIVNENITIKDPIQLLFIATKQKNSLLIQPRT 189
Query: 232 LIIADEGSYVSYLEGCTAPQRDE-------NQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
L++A++GS +S +E + + +V E+ DN+ + +S +Q
Sbjct: 190 LVVAEKGSDLSIVEYYSTVENPYLELDQIVPYFTNSVTEIFLKDNSRVIHSRIQLES--- 246
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
I ++K + S Q + GS ++ G ++ +++
Sbjct: 247 -----NISFHISKSNITQNQDSFYVLNQFDLGSKVSRNNIEIFQNGARTESYLNGLSLLG 301
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q + T + N + K + ++ + GK+ V + A ++ +LL+
Sbjct: 302 NDQISCTKTSINLNYPNGIIDQLHKYVIDDKAHGIFDGKIIVSKLAQITKAKQLNRNLLL 361
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
N +T P ++ + H AT +++ LFY RG+ E A L+V+ F+RE+
Sbjct: 362 SKNSHINTKPELQIIADNVKCSHGATITQLEANELFYLQSRGLSELEARHLLVDAFMREI 421
Query: 465 LQKLPMEFAVEAQKLID 481
L K+P + QKLI
Sbjct: 422 LMKIPHKSLE--QKLIK 436
>gi|148255359|ref|YP_001239944.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. BTAi1]
gi|146407532|gb|ABQ36038.1| Iron-regulated ABC transporter permease protein SufD
[Bradyrhizobium sp. BTAi1]
Length = 440
Score = 216 bits (549), Expect = 9e-54, Method: Composition-based stats.
Identities = 75/421 (17%), Positives = 148/421 (35%), Gaps = 28/421 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R A+ + P R + DL + +
Sbjct: 33 DIRREAFAAFERTGLP---HRRIEEWKYTDLRALVREVLPLAGTPDAAALARAKVAIASV 89
Query: 116 GIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
I + +L GV +++ A S V T + L + ++ DL+
Sbjct: 90 AIDGATKIVLVDGVVALELSDLAALPSGVSVRTLRALLDE---------QSNESRGDLLL 140
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ +LN+A+ TDG V + GV+ L ++ R+ ++
Sbjct: 141 TKA-------SDPMLSLNAALATDGVVVTVADGVQLSSPLQLIHVATASKVARYSRSHVL 193
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ + +E A + + D A + + + ++
Sbjct: 194 IGQGARAALVENSIAAEGAAAYQANDAAVIWVGDEAALSHVRLMRDATDVVNVSSELFT- 252
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G +SK+S + +G A++ L GE S + + Q D
Sbjct: 253 -------VGAKSKLSLFNMTSGGAVSRLQAFITLAGEASELIVNGVNLLRDKQHGDMTLV 305
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H TSR + + +++ ++G++ V + A + +LL+ + A + P
Sbjct: 306 VDHAVPGCTSRENFRAVLDDRAHSVFQGRIIVRQDAQQTDGKMMTRALLLSDEAEADSKP 365
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E + H AT + D LFY RG+PE+ A AL++ FV E ++ + +
Sbjct: 366 ELEIFADDVSCGHGATAGALDDSLLFYLQARGLPEKQAQALLIQAFVGEAIEAIEDDDLR 425
Query: 475 E 475
E
Sbjct: 426 E 426
>gi|300716482|ref|YP_003741285.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
gi|299062318|emb|CAX59435.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
billingiae Eb661]
Length = 408
Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/426 (18%), Positives = 142/426 (33%), Gaps = 50/426 (11%)
Query: 59 LLAYRRWL---TMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
L A + W + P+ W + FD +AAP + DV E ++
Sbjct: 11 LQAQQHWQQVLRLGLPTRKQENWKYTPLEGL-FDH--QFAAPTAA-------DVTAEQVK 60
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
L V VD F++ + F + +
Sbjct: 61 AL-----------ALDIDAIKMVFVDGRFNAALSDSEFDLFNVQVTDSAQRRELSAPVQA 109
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
++ ++ + + A + ++I + M S Y R
Sbjct: 110 EVFLHLTESLAEEVTSIHLARGKSAARALYMLHISSSAQAEMSTSHY------------R 157
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ DEG+ + +E + + A NA++K+ + +
Sbjct: 158 HHLQLDEGAEATIIEHY-VSLNEASHFTGARFTANVAKNAQLKHYKL-------AFEHNS 209
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
Y+F + + G+ +T S L GE + S+ + + D
Sbjct: 210 SYHFSHN-DLVIERDANVKSHSFLLGAGLTRHNTSVQLNGEGTDLGINSLMLPVDKEVCD 268
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
S T + H + SR + K I + + G + V + A + ++LL+G
Sbjct: 269 SRTYLEHNKGHCQSRQLHKTIVRDKARAVFNGMIKVAKHALKTDGQMTNNNLLLGRLAEV 328
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT +I DE +FY RGI EE+A +I+ F E+ + +
Sbjct: 329 DTKPQLEIYADDVKCSHGATIGRIDDEQMFYLRARGINEESAQRMIIYAFAAELTEAITD 388
Query: 471 EFAVEA 476
E EA
Sbjct: 389 EVLKEA 394
>gi|281422602|ref|ZP_06253601.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
gi|281403272|gb|EFB33952.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
Length = 449
Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats.
Identities = 87/434 (20%), Positives = 167/434 (38%), Gaps = 29/434 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + + PS RY D + +P+ +L I
Sbjct: 32 RDAAFEDFRRLGFPSRKIERYKYTDMSAI-----------------FEPDYGLNLNRLEI 74
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E V ++ V + + GVI +++ E+P+ + KY
Sbjct: 75 PVDPYEAFRCDVPNLSTSLYFVVNDAFYNKALPKVELPEGVIVDSLNKIAAENPEFIGKY 134
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-LIIA 235
+ + ++ ALN+ + DG +Y+PK V+ + + R LI+
Sbjct: 135 YAKIAKTDEDGITALNTFLAQDGLLIYVPKNVKVERTIQVINILRSDVDLMVNRRVLIVM 194
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+ G+ +L C D+N L V+E +NA + ++ + +S+ +Y
Sbjct: 195 EPGAEAKFLF-CDHAADDKNFLATQVIEAFVGENASLDLYCLEETHYKNSRVS-NVY--- 249
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+++ + + IT + +GE + I++ Q +D+ T +
Sbjct: 250 ----IEQQANSRVNHNVITLHNGITRNRLDLVFKGEGAECFCNGCVIADKNQVVDNNTLI 305
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + TS + K + G + + G+V V GA + + +L T P
Sbjct: 306 DHQVGHCTSNELYKYVLDGEARGAFAGRVLVRHGAQKTISQETNQNLCATKTARMFTQPM 365
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H +T +++D LFY QRG+ E A L+ F+ EV+ K+ +E
Sbjct: 366 LEIYADDVKCAHGSTVGQLNDAALFYMQQRGVSREEAKLLLQFAFINEVIDKMELEPLRD 425
Query: 475 EAQKLIDISLEGSV 488
L++ G +
Sbjct: 426 RLHHLVEKRFRGEL 439
>gi|227432826|ref|ZP_03914785.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351411|gb|EEJ41678.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 394
Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats.
Identities = 83/424 (19%), Positives = 158/424 (37%), Gaps = 43/424 (10%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
++ P++A++RY + D++ I +E+
Sbjct: 8 QSLPLPTFAKVRYSSWQLDEM------------------------------IAAKEETTT 37
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ + V V + +++ GVI M +++A EHP LV+K L +V+
Sbjct: 38 SYFTENNVHGIEVSGLSTTYQQLSDDMIARGVILMNMAQAQIEHPALVEKLLGSVISKTA 97
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIADEGSYVSYL 244
+ +A N A F G FVYIP+ V+ L + G R + + V L
Sbjct: 98 DRLSAQNFAQFNTGIFVYIPENVQFDDVLHLSLNHLAISGEDFVARIFVCVGANAKVDIL 157
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ + + V+E VA A++ Y+ + + R
Sbjct: 158 QEMHTIG-TQKTKASVVIEAVADVGAQVTYANIDAFGEQ--------TTAFINREVEVRD 208
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W E + L GE + I ++ Q T +L+ ++T
Sbjct: 209 HATVDWQNAEFNDGNVIIRLASQLNGEGATSHTNVIGLTTKKQTQGLVTTILNRGRHTIG 268
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I +G S + G + +GA S + L++ P + +
Sbjct: 269 HIFQRGFILNRSTLVFNGIGKIIKGAKGSDAQQESRVLMLSRRARGDANPLLLIDENDVT 328
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
H A+ ++ + ++Y + RGI E+ A L++ GF+ EVL K+P + A Q+ + +
Sbjct: 329 AGHAASVGRVDENQMYYLMSRGISEQVARKLVIRGFMGEVLAKMPTKAA---QRQVVEEI 385
Query: 485 EGSV 488
E +
Sbjct: 386 ERKL 389
>gi|115524971|ref|YP_781882.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisA53]
gi|115518918|gb|ABJ06902.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisA53]
Length = 439
Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/414 (17%), Positives = 144/414 (34%), Gaps = 28/414 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R LA+ + P+ R + DL + +
Sbjct: 32 EKRELAFESYARQGLPN---RRVEDWKYTDLRVLMREVLPLAAGPDHATLARAADALKLH 88
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
I + +L D V V + G++ + EA+ + L +
Sbjct: 89 AIEGVRRIVLV-------------DGVFVADLSDLADLEDGLVIRALREALDQGEPLEDR 135
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-TGQFERTLII 234
+ P + ALN+A+ TDG + + + L R+L+
Sbjct: 136 WP---APETADAMVALNTAMMTDGVVIEVGADIVLARPLQIVHVAAAATPVAIVTRSLLR 192
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ + +E A + +++ D A ++ +
Sbjct: 193 LGRNARATLVESFVAAGGTKGYQTHDALQIAIEDGARLEQIRLNEDATDAFH-------- 244
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G + ++ L TG A++ GE S + + NG Q D+
Sbjct: 245 IASCFATLGASAGLNTFNLTTGGAVSRYQAFIRFNGEGSEVMTNGVNLLNGTQHGDTTLF 304
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + +SR V + + G +++ ++G++ V A + +LL+ + A + P
Sbjct: 305 LDHAVPHCSSREVFRAVLDGRAHSVFQGRIIVRPHAQKTDAKMMTRALLLSDEAEADSKP 364
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H +TT + + LFY RG+PE+ A +L++ FV E ++ +
Sbjct: 365 ELEIFADDVTCGHGSTTGALDESLLFYLRARGLPEKDAQSLLIQAFVGEAIESI 418
>gi|126665740|ref|ZP_01736721.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126629674|gb|EBA00291.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 433
Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/382 (17%), Positives = 132/382 (34%), Gaps = 17/382 (4%)
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++ L T E AG + V + V G+
Sbjct: 45 ENWKYSAKHLKLTDEMASSLPLNAS--AGAEADIQGYTVVLVNGVVRPEASNYPALEGLS 102
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF-----VYIPKGVRCPME 213
S+ + +L L + + ++N ++ F + + G
Sbjct: 103 IQRFSDLNGDDAELAADLLGKSISDQPAKHGSINLSLLNAARFEDGLLIQLQPGTVLDQP 162
Query: 214 LSTYFRINEKGTGQ-FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
L + +G F L+ A S ++ +E + ++ A E D A +
Sbjct: 163 LFVVHHTSASHSGSAFPCILVAAGSNSQLTLVEDYVSSGESPVMVNTA-TEFSLGDGANV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+ G + G +R S+ + G + L GE
Sbjct: 222 TSVRLNT--EGQNVQHMGTTGVRQQR------NSRFESHSVGFGGTLRRHDLHVRLEGEG 273
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ + + ++ G Q D+ T + H+A + S + I+A S+ + G++ +H+ A
Sbjct: 274 AECKLNGVVVTQGTQHYDNHTTIEHIAAHCNSEESYRNIAADKSHAIFNGRIHIHQDAQK 333
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S +LL+ N + P +E H AT ++ ++ +FY + RG+ A
Sbjct: 334 SNANMSNKNLLLTNGAEIDSKPELEIYADDVKCAHGATIGQLDNDSIFYLVSRGLSPRDA 393
Query: 453 IALIVNGFVREVLQKLPMEFAV 474
L+ F+ E++ ++P+E
Sbjct: 394 KVLLTMAFINELVAQIPVEQVR 415
>gi|157370422|ref|YP_001478411.1| FeS assembly protein SufD [Serratia proteamaculans 568]
gi|157322186|gb|ABV41283.1| FeS assembly protein SufD [Serratia proteamaculans 568]
Length = 430
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/423 (17%), Positives = 139/423 (32%), Gaps = 48/423 (11%)
Query: 61 AYRRWL---TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
A W + P+ ++ + L G ++P L E +
Sbjct: 31 ALAHWQQALRLGWPT---RKHENWKYTPL---------EGLLEQQFLEPPL----EPVTA 74
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
R+ L V +D F + + + + V +A+ E
Sbjct: 75 AQRDALALDIDAYRLVFIDGRFSAALSDSELGDY--QFDVAPYGTLQALPE--------- 123
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-----GQFERTL 232
P+ + L ++ + S + + G L + +G R
Sbjct: 124 ----PIQAEIFLHLTESLAQETSIIRVAAGKIAERPLYLLHISSGRGAEGEVNTVHHRHH 179
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ + +E + A + DNA++++ + + Y
Sbjct: 180 LEIARNAQAEVIEHYVSLND-AAHFTGARLTANVGDNAQLQHCKL-------AFESRPSY 231
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+F G +++ G+ +T S L GE S S+ + G + D+
Sbjct: 232 HFAHN-DLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGSNLTINSLVLPVGKEVCDTR 290
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H SR + K + + + + G + V + A + +LL+G T
Sbjct: 291 TYLEHNKGYCESRQLHKVVVSDRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDT 350
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H AT +I +E LFY RGI + AA +I+ F E+ + + +
Sbjct: 351 KPQLEIYADDVKCSHGATVGRIDEEQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIGNDT 410
Query: 473 AVE 475
E
Sbjct: 411 IRE 413
>gi|37526510|ref|NP_929854.1| cysteine desulfurase activator complex subunit SufD [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36785941|emb|CAE14993.1| SufD protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 438
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 55/286 (19%), Positives = 96/286 (33%), Gaps = 12/286 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT----GQFERTLIIADEGSYVSYLE 245
L ++ + + G L + + R I + S +E
Sbjct: 142 HLTESLAQQPLVITLKAGQVAEKPLYLLNITSSHCSEALNSSHYRYHIAVGTNASASVIE 201
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + + + DNA + + Y+F G
Sbjct: 202 HFVSIDGQQPHMTGGRLTAEVGDNAHFTHIKL-------GVENSASYHFAHN-DIVIGRD 253
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+++ T GS + S L GE + S+ + G + D+ T + H + SR
Sbjct: 254 AQVKSTSFLLGSGLGRHNTSVKLNGEGANLSLNSLLLPQGKEVADTRTYLEHHKGHCESR 313
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K I S + G + V A + ++LL+G T P +E
Sbjct: 314 QLHKTIVMDQSKAVFNGMIKVAPHALKTDGQMTNNNLLLGKQAEVDTKPQLEIYADDVKC 373
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I +E LFY RGI A ++V F E+ + + E
Sbjct: 374 SHGATVGRIDEEQLFYLQSRGISRRDAEHMMVFAFAAELTESIEDE 419
>gi|150400752|ref|YP_001324518.1| SufBD protein [Methanococcus aeolicus Nankai-3]
gi|150013455|gb|ABR55906.1| SufBD protein [Methanococcus aeolicus Nankai-3]
Length = 406
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/406 (23%), Positives = 190/406 (46%), Gaps = 28/406 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
I+ +D Y K + S ++D E +LGI E+ + +
Sbjct: 26 EDINLED---YKIEKGGISIDSFAELDEEYKSKLAQLGIDTEEK--------ATIGSYLQ 74
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
++ +V + +S + +PISEA+ ++ + +YL VV + D YAA + T+
Sbjct: 75 VNNKAVYSKI-----ESKIEMIPISEALEKYN--LDEYLWNVVDIKD-KYAARTALELTE 126
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G F+ +PKGV+ + L T I E+ + Q +II +EG ++ + GC ++ LH
Sbjct: 127 GFFIRVPKGVKETIPLQTCLLIGEESSSQNVHNIIIVEEGGELNVITGCATSPHIKSGLH 186
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
V E +A++ Y+ + +W ++ + IS + +
Sbjct: 187 IGVSEFYVGKDAKLTYTMIHDWGE-------NVHVRPRTGLQIKENGVFISNYVVLSPVK 239
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP+ +G+ S F ++A +G +D G++++ KN+T+ ++S+ I S
Sbjct: 240 SIQSYPTAHCKGDNSSATFQTVAYGSGNSVMDMGSRVILDGKNSTADMISRTIVVDNSKI 299
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
RG + + +C L++ ++ H +P +E+K ++ +L HEA KI+++
Sbjct: 300 IARG--HLVGANDDVKGHLECRGLILSDDAHIHAVPELEAKKTNLDLSHEAAVGKIAEDQ 357
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
L Y + RG+ + A +LI+ GF+ ++ LP + A K+++++L
Sbjct: 358 LMYLMSRGLTVDEATSLIIKGFLSVDIKGLPPKLAKAVDKIMEMTL 403
>gi|283478520|emb|CAY74436.1| FeS assembly protein SufD [Erwinia pyrifoliae DSM 12163]
Length = 426
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 61/299 (20%), Positives = 105/299 (35%), Gaps = 13/299 (4%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ----FERTLIIADE 237
PV + L ++ + + + +G L + TG+ R + DE
Sbjct: 123 PVHPEVFLHLTESLAEQVTLIQLARGKAAARPLYLLHISSGSSTGELNTSHYRHHLQLDE 182
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ + +E E A +NA + + +
Sbjct: 183 AAEATVIEHY-VSLDAEPHFTGARFTAEVGNNAALTHYNLAFEDCRSYHFSHNDLTL--- 238
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G +++ G+ +T + S L GE S S+ + + DS T + H
Sbjct: 239 -----GRDTRVQSHSFLLGAGLTRHHTSTRLNGEGSDLAINSLMLPMDKEVCDSRTWLEH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + + G + V R A + ++LL+G T P +E
Sbjct: 294 NKGYCQSRQLHKTIVRDRARAVFNGIIKVARHALKTDGQMSNNNLLLGRLAEVDTKPQLE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +I +E +FY RGI E AA +I+ F E+ + + E EA
Sbjct: 354 IYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEA 412
>gi|149196445|ref|ZP_01873500.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
gi|149140706|gb|EDM29104.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
Length = 434
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 77/425 (18%), Positives = 159/425 (37%), Gaps = 42/425 (9%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ ++R + ++ P + LR
Sbjct: 21 WLGDFRKSHASKVSELEFP---GRHNERWKYT-----------------------PLRAV 54
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK------SGVIFMPISEAI 166
+L + +Q ++ + + + V + +F EEL G +P+S+A+
Sbjct: 55 LELDYQVAQQVNVSDEVLASHRLQGSIELVFINGSFSEELSNLPVDLPKGFSVVPVSQAL 114
Query: 167 C-EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ V+ L V ++ + LN + F DG+F+ + KG + + + +
Sbjct: 115 NSDLAHDVQNILEYEVSEEEDVFETLNKSSFRDGAFIKVAKGAYSETAIHILNFSSAEQS 174
Query: 226 G-QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
F R LI +EG+ + +E C + +++ + ++V + + + YS +QN
Sbjct: 175 AVNFSRHLIYLEEGALATVIETCADRDGEVKKINNIMTDIVLQERSVLTYSRLQNESEES 234
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
V+ +K + + +G A++ + L G+ + + + +
Sbjct: 235 VN--------VSALRARLAADAKFNSSVFSSGGALSRHFMDVELNGKHAETDLLGLFTTK 286
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G D+ + H + + KG+ S + G V++ R A + +LL+
Sbjct: 287 GTMHADNRGIIRHNVPECEANQLYKGVLDDSSRGVFNGIVNIARDAQLTNATQMSRNLLL 346
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
P ++ H A ++SD LFY R I E AI +++ GF+ EV
Sbjct: 347 SRQARVDAKPELDVYADDVKAAHGAAIGQLSDAELFYLQTRCISREEAIQMLIKGFMHEV 406
Query: 465 LQKLP 469
+ K P
Sbjct: 407 IDKAP 411
>gi|299142246|ref|ZP_07035379.1| FeS assembly protein SufD [Prevotella oris C735]
gi|298576335|gb|EFI48208.1| FeS assembly protein SufD [Prevotella oris C735]
Length = 447
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/452 (19%), Positives = 170/452 (37%), Gaps = 32/452 (7%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
++I+ SA EP + R A+ + P+ RY D L
Sbjct: 16 EMIKSHSA---EP--LNAVRDRAFADFKAQGFPTRKVERYKYTDMAAL------------ 58
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P+ +L IP+ + V ++ + + + +GV
Sbjct: 59 -----FSPDYGLNLNRLAIPVNPYDAFKCDVPNLSTSLYFIVNDSFYSQKLPQVQLPAGV 113
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I + E PD + KY + + ++ ALN+ + DG FVY+PK V+ +
Sbjct: 114 IVDSLRHIAAEKPDFIAKYYAQIAATHEDAVTALNTMLAQDGLFVYVPKNVKVDRTIQII 173
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+ R +++ E + L C D L V+E DNA ++ + +
Sbjct: 174 NILRADVDLMVNRRVLVVMEQGAEAKLLFCDHATDDRKFLSTQVIEAYVGDNASLELNCL 233
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+ + + + +Y + S+++ + + +T + +GE +
Sbjct: 234 EETHLKNVRVS-NVY-------IEQQANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHC 285
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
+++ Q +D+ T + H + TS + K + + + G+V V A + +
Sbjct: 286 NGCVVADKQQHVDNNTLIDHQVPHCTSNELYKYVLDENAVGAFAGRVLVRHDAQKTISQE 345
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+L + +T P +E H +T +++D LFY QRGI + A L+
Sbjct: 346 TNQNLCVTKTARMYTQPMLEIYADDVKCAHGSTVGQLNDAALFYMQQRGISLKEAKLLLE 405
Query: 458 NGFVREVLQKLPME-FAVEAQKLIDISLEGSV 488
F+ EV+ K+ +E L++ G +
Sbjct: 406 FAFINEVIDKMELEPLRDRLHHLVEKRFRGEL 437
>gi|254422828|ref|ZP_05036546.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
gi|196190317|gb|EDX85281.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
Length = 462
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 77/439 (17%), Positives = 159/439 (36%), Gaps = 41/439 (9%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ R A PS + F DL + LD Y
Sbjct: 39 LKALRDQAIALVNERSFPS---GKDEEWRFTDLS-----------KMLDQPFQRSQPVYS 84
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVS---VVTTFKEELKKSGVIFMPISEAICEHP 170
+ ++L+ T ++ +DS V + + + + S+ +
Sbjct: 85 QADDWNAHLKLLS-DGTCLTTINGHYDSSLSREVDQSTDKAIVGPLSELLKNSDYAEKLG 143
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
++K L+ + G + ALN+ F D V++ + R ++ G R
Sbjct: 144 PILKDKLAQ-IKGGSEVFTALNTVGFADVMVVWVQADQVVDAPIYI-ARGSQGGFISHVR 201
Query: 231 TLIIADEGSYVSYLEGCTAPQRDEN-------------QLHAAVVELVALDNAEIKYSTV 277
+L+IA+ + + +E P N + +V E+ + A++ + V
Sbjct: 202 SLVIAERHAKFTLVESFFGPAEATNAQCSVGQDEPTETCCNNSVTEIWLAEGAQVNHIRV 261
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
Q+ ++ K + S+ T ++ G+ ++ + G Q+ +
Sbjct: 262 QD-------ESANTFHLA-KTAVDQAANSQYQCTAVDLGAKLSRHHVEVYQSGAQTDTKL 313
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
Y ++ Q D+ + + ++ + K I S+ + GKV V + A +
Sbjct: 314 YGLSALGDRQLADTHSLLALTYPYGSATQIQKNIVDDQSHCVFNGKVYVSKEAQLTDASQ 373
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+L++ T P ++ + H AT S++ + +FY RGI E A L++
Sbjct: 374 LNRNLMLSTKARVDTKPELDIIADNVKCAHGATVSQLQSDEVFYLQSRGISAEQAQRLLL 433
Query: 458 NGFVREVLQKLPMEFAVEA 476
GF E+++K+ + EA
Sbjct: 434 YGFGMEIVEKVSVPSLKEA 452
>gi|259416429|ref|ZP_05740349.1| SufBD [Silicibacter sp. TrichCH4B]
gi|259347868|gb|EEW59645.1| SufBD [Silicibacter sp. TrichCH4B]
Length = 426
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 85/425 (20%), Positives = 148/425 (34%), Gaps = 44/425 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R TM P + D L AP + D + + T++++ I
Sbjct: 30 RRAAVSRVQTMGLPDRRDEYWKYTRPDTLTSADAPNAA----VFDSGEAPMFDTFDRIRI 85
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V VD VFD+ + ++L GV ++E + K
Sbjct: 86 ---------------VFVDGVFDAEA-----SDDLSLEGVNIERLAEIQGKDIHWAKDIY 125
Query: 178 S----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ AALN+A TDG V++ + ++ +R + + +I
Sbjct: 126 GVLEARGQTPVERPLAALNTAFATDGVVVHVTG--KPSKPINLVYRHETESSDAILHHVI 183
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
D G+ + LE A R +E+ DN + Q G + +
Sbjct: 184 KVDSGAEATILENGPAASRF-----NKAMEIDIADNGTLHLVRAQ----GRDHERRAATH 234
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G + L +T G+ + + +G D
Sbjct: 235 LFAR----LGTEAVFKSFTLTVNGVLTRNEAVVEFLGDDAVAHVAGACVGDGDFHHDDTV 290
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V GA + + SLL+ ++
Sbjct: 291 FVTHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDDDSQFLAK 350
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL-PMEF 472
P +E H +T+ I ++ LFY RG+PE A L+ F+ E ++++ E
Sbjct: 351 PELEIYADDVACSHGSTSGAIDEDGLFYLRSRGVPESEATDLMTLAFLAEAVEEIEDDEI 410
Query: 473 AVEAQ 477
A
Sbjct: 411 AASIN 415
>gi|294083586|ref|YP_003550343.1| Fe-S center production/stability protein SufD [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663158|gb|ADE38259.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 421
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 69/409 (16%), Positives = 123/409 (30%), Gaps = 34/409 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A RW P A F L A + Q + +
Sbjct: 20 RSDALARWQASGWPD---ANVEAWRFTRLGAVIARDLVPAIQGGETGRETSATIAKIAAE 76
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
++D + D + + + ++
Sbjct: 77 MQAHVIRFYNGMIDVASLDGLPDGMVATHSLTSDFDAIAAEVAGLA-------------- 122
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ L+ A + G + + GV+ + F + + ++
Sbjct: 123 -----PNDHPVGNLSLAAMSSGLRLSVAAGVQITQPVLLAFEGDGENVSAHPVLMVDVGM 177
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS E + + L+A + L D A + Y+ VQ
Sbjct: 178 GSAAVIAEWHQS----QLGLNAPLCALRLADKARLDYAKVQAEGADSVHLAAT------- 226
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G G S + + G + L GE + +I + Q D T M H
Sbjct: 227 -GIALGEESVFAGFSISAGGQLARLETHVTLTGETAECGLSAIYLGRDKQHHDITTYMDH 285
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ S + +G+ S ++GKV V A + +LL+ A P +E
Sbjct: 286 AVGHCHSNQIIRGVLDDASRGVFQGKVHVAPDAQKTDGQQMSRALLLSRKAEADAKPELE 345
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
H AT ++ + LFY RGIP+ A A+++ F+ + +
Sbjct: 346 IYADDVICAHGATVGELDETQLFYLTSRGIPKAKARAMLIGAFLDDAID 394
>gi|188994223|ref|YP_001928475.1| putative ABC transporter permease protein [Porphyromonas gingivalis
ATCC 33277]
gi|188593903|dbj|BAG32878.1| putative ABC transporter permease protein [Porphyromonas gingivalis
ATCC 33277]
Length = 447
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 84/435 (19%), Positives = 162/435 (37%), Gaps = 27/435 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A + + P + Y D +L+ Y G P +
Sbjct: 26 LNEQREKASMAFASKGLPRYGIENYQRTDLSELFGY-----DYGVNLNRVNFPIRQKEAF 80
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+P + + DA + S V+ E G +S+ + HP++
Sbjct: 81 HCTLPDLD------TDLCYIVNDAYDNEWSRVSELPE-----GAFVGSLSDFVLSHPEIA 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL- 232
+Y + + A ++ DG +Y+P G + + R L
Sbjct: 130 ARYYAQAAAPDHDGIIAFSTMFAQDGFVIYLPDGAVLKNPIQLVQLLRADMEILANRRLL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II + + S L C + L VVE+ A +N+ ++ +
Sbjct: 190 IILGKDAEASLLI-CEHTLDTHSFLVTEVVEIFAAENSRFALYDLEESSKNTKR------ 242
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ + S ++ + + +T C L GE + +AI+ G Q +D+
Sbjct: 243 --IASVHVRQAANSNVTINCMTIHNGLTRNNYYCHLEGEGADLTLGGMAIAEGKQHVDNY 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+++ HL N S + K I + + + G++ V +GA + + +LL+ + ++
Sbjct: 301 SRIEHLVPNCQSNELFKYILSRQAQGAFSGRIYVAKGAQKTAAYQNNRNLLLDDTARMYS 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H TT ++ D+ LFY QRGIP A ++ F +V++ + +E
Sbjct: 361 KPQLEIYADDVKCSHGMTTGQLDDDALFYLRQRGIPLAEAKTMLSVAFTDDVVKLVHIEQ 420
Query: 473 AVE-AQKLIDISLEG 486
E + +I+ G
Sbjct: 421 LRERLRDIIEHRFRG 435
>gi|259908555|ref|YP_002648911.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
gi|224964177|emb|CAX55684.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
pyrifoliae Ep1/96]
Length = 399
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 61/299 (20%), Positives = 105/299 (35%), Gaps = 13/299 (4%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ----FERTLIIADE 237
PV + L ++ + + + +G L + TG+ R + DE
Sbjct: 96 PVHPEVFLHLTESLAEQVTLIQLARGKAAARPLYLLHISSGSSTGELNTSHYRHHLQLDE 155
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ + +E E A +NA + + +
Sbjct: 156 AAEATVIEHY-VSLDAEPHFTGARFTAEVGNNAALTHYNLAFEDCRSYHFSHNDLTL--- 211
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G +++ G+ +T + S L GE S S+ + + DS T + H
Sbjct: 212 -----GRDTRVQSHSFLLGAGLTRHHTSTRLNGEGSDLAINSLMLPMDKEVCDSRTWLEH 266
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + + G + V R A + ++LL+G T P +E
Sbjct: 267 NKGYCQSRQLHKTIVRDRARAVFNGIIKVARHALKTDGQMSNNNLLLGRLAEVDTKPQLE 326
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +I +E +FY RGI E AA +I+ F E+ + + E EA
Sbjct: 327 IYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEA 385
>gi|91772531|ref|YP_565223.1| SufBD [Methanococcoides burtonii DSM 6242]
gi|91711546|gb|ABE51473.1| FeS cluster assembly protein sufB [Methanococcoides burtonii DSM
6242]
Length = 407
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 90/400 (22%), Positives = 171/400 (42%), Gaps = 23/400 (5%)
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
DFD + A + + L+++D + +T +G+ E++ V
Sbjct: 24 DFDLNKFEIAAQEVPQTDDLENLDDDFKKTLLNVGVLTDEKDRSGSFLMLDNGVS----- 78
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
LK + M + EA+ E D +K Y +V V + Y A + +G F
Sbjct: 79 -------HSSLKDPNIELMSLHEAL-EKHDWLKDYSWKLVSVDADKYTAKSYLEDANGYF 130
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ P G + M + T + K Q +II +E + + + GCT + E +H +
Sbjct: 131 IRAPAGQKSSMPVQTCLVMGHKDVAQTVHNIIIVEEDAKLDVITGCTTKKGVERAIHLGI 190
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
E+ + ++ + NW + + S ++ L
Sbjct: 191 SEIYVKKGGILNFTMIHNWAGDVGVRPRTVIHL-------EEGASFVNNYILLKPVRSIQ 243
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YP+ +L GE + F++IA+++ ++D G+++L A NT + ++S+ I+ G R
Sbjct: 244 SYPTAILDGEGAFARFHTIAVAHPGSELDLGSRVLFNAPNTKAELISRTITTGGK-VIAR 302
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G++ ++ H + +C L++ + IP +E+ + L HEA +I+ E + Y
Sbjct: 303 GEMVANK--PHCKGHLECHGLVLKDGGTQLAIPALEASVADVELTHEAAVGRIAREQVEY 360
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ RG+ EE A+ +IV GF+ + LP E A + I
Sbjct: 361 LMARGLSEEDAVGMIVRGFLDVGITGLPDELAKDIDDTIA 400
>gi|309806255|ref|ZP_07700268.1| FeS assembly protein SufD [Lactobacillus iners LactinV 03V1-b]
gi|308167239|gb|EFO69405.1| FeS assembly protein SufD [Lactobacillus iners LactinV 03V1-b]
Length = 319
Score = 214 bits (545), Expect = 3e-53, Method: Composition-based stats.
Identities = 61/315 (19%), Positives = 130/315 (41%), Gaps = 11/315 (3%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-TGQFER 230
+ K +++ V+ + ++ A + A G F+Y+PK V + + + K T
Sbjct: 2 IKKYFMTEVIKMDEDRITAYHQAFVNAGLFLYVPKNVEINIPIKADLVQDSKSETSFNPH 61
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
LI+A + S + +++ N ++ AV E+ A D + +++S++ +
Sbjct: 62 LLIVAGQNSKLKFVQHLKTIGSCHNTMNMAV-EIWAEDGSHVEFSSL-------EEIGKN 113
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ KR + + + W T L G+ S +IA++ Q +
Sbjct: 114 TTLYFNKRANIM-RDAYVEWAVGLMNDCNTVGNIDSELIGDGSYAYSKAIAVTTDKQHVG 172
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
++++ ++T I +G+ S + G + GA S+ Q L++ +N
Sbjct: 173 INNRVINRGPHSTGLINQRGVLLDNSRLIFNGIGQIKHGAHGSKADQQNRVLMMSDNAHG 232
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP- 469
P + + H A+ + + Y + RGIP + A L++ GF+ VL +P
Sbjct: 233 DANPLLLIDENDVIAAHAASVGPVDPIQMNYLMSRGIPFDQAERLVIRGFLGAVLDAIPA 292
Query: 470 MEFAVEAQKLIDISL 484
++ E +++ L
Sbjct: 293 VDVRHEMINILERKL 307
>gi|188533953|ref|YP_001907750.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
gi|188028995|emb|CAO96863.1| Component of SufB-SufC-SufD cysteine desulfurase [Erwinia
tasmaniensis Et1/99]
Length = 398
Score = 214 bits (545), Expect = 3e-53, Method: Composition-based stats.
Identities = 75/419 (17%), Positives = 134/419 (31%), Gaps = 45/419 (10%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+++ L + P+ + + L V PE + L +
Sbjct: 7 WQQLLRLGLPT---RKQENWKYTPL---------DRLLDNQFVQPEPAK----LDADTIQ 50
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F S + + + I++A E +L
Sbjct: 51 SLALPIDAVRLVFVDGRFSSELSDG-------EHDLFTIQIAQAA-ERREL-------NA 95
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK----GTGQFERTLIIADE 237
PV + L ++ +F+ + +G L + T + L D
Sbjct: 96 PVQPEVFLHLTESLAEQVTFIQLARGKAATRPLYLLHISSSSAGELNTSHYRHHL-QLDA 154
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ + +E + + DNA + + +
Sbjct: 155 AAEATVIEHYISLS-AAPHFTGSRFTAEVGDNASLAHYNLSFEDSSSYHFSHNDLTL--- 210
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G +++ G+ +T + S L GE S S+ + + DS T + H
Sbjct: 211 -----GRDTRVQSHSFLLGAGLTRHHTSTQLNGEGSDLAINSLMLPIDKEVCDSRTWLEH 265
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + G + V + A + ++LL+G T P +E
Sbjct: 266 NKGYCQSRQLHKTIVRDRGRAVFNGIIKVAKHALKTDGQMSNNNLLLGRLAEVDTKPQLE 325
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +I +E +FY RGI E AA +I+ F E+ + + E EA
Sbjct: 326 IYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAIANETLKEA 384
>gi|254485867|ref|ZP_05099072.1| FeS assembly protein SufD, putative [Roseobacter sp. GAI101]
gi|214042736|gb|EEB83374.1| FeS assembly protein SufD, putative [Roseobacter sp. GAI101]
Length = 427
Score = 214 bits (545), Expect = 3e-53, Method: Composition-based stats.
Identities = 85/422 (20%), Positives = 148/422 (35%), Gaps = 43/422 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R +M P R + P+++ + D L ++L I
Sbjct: 30 RKDALARVQSMGLPQ---RRDEYWKYTRPDTLIQPEALPAALRVSDEVA-LFDHIDRLKI 85
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP---DLVK 174
V VD VFD+ + ++L G+ +++A + DL
Sbjct: 86 ---------------VFVDGVFDADA-----SDDLTLEGINIERLADASADIHWARDLYG 125
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ AALN+A DG +++ + ++ +R + I
Sbjct: 126 TLETRGQSPVARPLAALNTAFAPDGILIHV--TAKVSKPVNFIYRRTSETADAMLHHCIK 183
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+EG+ ++ LE R V+E+ DNA + Q G + +
Sbjct: 184 LEEGAELTLLENGPVAARF-----NGVLEVEVADNAAFHHVRAQ----GRDHEQRAATHI 234
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-FQQIDSGT 353
T+ G S L +T L G+ + + +G D
Sbjct: 235 FTR----LGTESTFKSFTLTANGVMTRNDCVIELTGDDANATVAGACVGDGSDFHHDDTV 290
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 291 FVTHDAVNCESRQVFKKVLRNGATGVFQGKILVKAGAQKTDGYQISQSLLLDEDSQFLAK 350
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H +T+ I ++ LFY RG+P AA L+ F+ E + ++ E
Sbjct: 351 PELEIYADDVACSHGSTSGAIDEDALFYLRSRGVPHGAATDLLTLAFLAEAVTEVEDETL 410
Query: 474 VE 475
E
Sbjct: 411 RE 412
>gi|317153400|ref|YP_004121448.1| SufBD protein [Desulfovibrio aespoeensis Aspo-2]
gi|316943651|gb|ADU62702.1| SufBD protein [Desulfovibrio aespoeensis Aspo-2]
Length = 386
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 84/381 (22%), Positives = 154/381 (40%), Gaps = 13/381 (3%)
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D ++ E + L ++Q +LAGV + A + + + GV +
Sbjct: 11 FDGMNREAIDDLNTLSQEDKDQLLLAGVVADESMRSASYLQ-MDHSAVHCQSHDEGVEIL 69
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
I +A+ ++ D + +Y T+V + + + G F+ + G + + + +
Sbjct: 70 DIKDALKKY-DGLGEYYWTLVDKDKDEFTRAANDNLHGGYFIRVRAGAKIKDPIQSCLML 128
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+ GQ L+I +EG+ + GC+ + H + E NA + ++ V NW
Sbjct: 129 KSENVGQNVHNLVIIEEGASAHIITGCSVAHGTKAGAHLGISEFFIKKNASLTFTMVHNW 188
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G + +S L YPS + G S F S+
Sbjct: 189 GESVAVRPRSA-------GVVEEGGTFLSNYVLLKAVKDLQMYPSITMNGANSVARFNSV 241
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++ +D G +++ A NT I++K I+AG + RG + A S+ +C
Sbjct: 242 VVAPKGAHLDLGNRVIMNAPNTRCEIIAKTIAAGGTIIN-RG--HIGAHAVPSKGHLECQ 298
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++G+ IP ++ L HEA+ KI+ + Y + RG+ E A + IV GF
Sbjct: 299 GLILGDG-RIWAIPELDGTAEGVELSHEASVGKIAQNEIEYLMARGLDEAEATSTIVRGF 357
Query: 461 VREVLQKLPMEFAVEAQKLID 481
+ + LP E K I+
Sbjct: 358 LNTDIMGLPDRLQREIDKQIE 378
>gi|325958124|ref|YP_004289590.1| SufBD protein [Methanobacterium sp. AL-21]
gi|325329556|gb|ADZ08618.1| SufBD protein [Methanobacterium sp. AL-21]
Length = 406
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 88/384 (22%), Positives = 165/384 (42%), Gaps = 22/384 (5%)
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
D+ + ++ K+G+ E T + D V + + E + M +
Sbjct: 44 DLPGKYQKSLLKVGVDPSE--------TGRAGSFLQIDQSKVCSNCESE----NIELMGL 91
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
+A+ + D VK Y+ VPV + Y A + G F+ + + I +
Sbjct: 92 PQAL-DKYDWVKDYMWNAVPVDTDKYTAKTALGEPGGYFIRSLPNTKEVFPIQACMFIGD 150
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
+ Q +IIA+E S + + GC+ ++ +H V E A+I ++ V NW
Sbjct: 151 EKVAQTAHNIIIAEENSELHIITGCSTGSDVQSAMHVGVSEFYLKKGAKITFTMVHNWAE 210
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
+ IS L + YP+ +GE S F SI
Sbjct: 211 QVEVRPRTGV-------ILSDDTTYISNYILTSPVNTIQTYPTAYCQGENSKVVFQSILG 263
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+D+G++ + KN+++ ++++ +S S RG + + + +C L
Sbjct: 264 GQKDSILDTGSRAILTGKNSSAEMITRAVSKDESQIYTRG--HLAGKSPDVKGHLECMGL 321
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
++ ++ +++P +E + L HEA KI++E + Y + RG+ EE A ++IV GF+
Sbjct: 322 VLSDDSLIYSVPELEGSATDLELSHEAAVGKIAEEEVLYLMSRGLTEEEAASMIVKGFLS 381
Query: 463 EVLQKLPMEFAVEAQKLIDISLEG 486
+ LP E A E Q++ID+S++G
Sbjct: 382 MDIAGLPPELAAETQRMIDLSIQG 405
>gi|34540104|ref|NP_904583.1| hypothetical protein PG0259 [Porphyromonas gingivalis W83]
gi|34396415|gb|AAQ65482.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 447
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 84/435 (19%), Positives = 161/435 (37%), Gaps = 27/435 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A + + P + Y D +L+ Y G P +
Sbjct: 26 LNEQREKASMAFASKGLPRYGTENYQRTDLSELFGY-----DYGVNLNRVNFPIRQKEAF 80
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+P + + DA + S V+ E G +S+ HP++
Sbjct: 81 HCTLPDLD------TDLCYIVNDAYDNEWSRVSELPE-----GAFVGSLSDFALSHPEIA 129
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL- 232
+Y + + A ++ DG +Y+P G + + R L
Sbjct: 130 ARYYAQAAAPDHDGIIAFSTMFAQDGFIIYLPDGAVLKNPIQLVQLLRADMEILANRRLL 189
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
II + + S L C + L VVE+ A +N+ ++ +
Sbjct: 190 IILGKDAEASLLI-CEHTLDTHSFLVTEVVEIFAAENSRFALYDLEESSKNTKR------ 242
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ + S ++ + + +T C L GE + +AI+ G Q +D+
Sbjct: 243 --IASVHVRQAENSNVTINCMTIHNGLTRNNYYCHLEGEGADLTLGGMAIAEGKQHVDNY 300
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+++ HL N S + K I + + + G++ V +GA + + +LL+ + ++
Sbjct: 301 SRIEHLVPNCQSNELFKYILSRQAQGAFSGRIYVAKGAQKTAAYQNNRNLLLDDTARMYS 360
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H TT ++ D+ LFY QRGIP A ++ F +V++ + +E
Sbjct: 361 KPQLEIYADDVKCSHGMTTGQLDDDALFYLRQRGIPLAEAKTMLSVAFTDDVVKLVHIEQ 420
Query: 473 AVE-AQKLIDISLEG 486
E + +I+ G
Sbjct: 421 LRERLRDIIEHRFRG 435
>gi|84489133|ref|YP_447365.1| hypothetical protein Msp_0312 [Methanosphaera stadtmanae DSM 3091]
gi|84372452|gb|ABC56722.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
Length = 405
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 90/380 (23%), Positives = 161/380 (42%), Gaps = 11/380 (2%)
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
E + + E L E GV ++ A F + F + + GV M ++A+
Sbjct: 36 EHIDSLEDLQKVDLETLTSVGVDATEEDRAASFLQMDQSEIFVKNM-FPGVEVMGTAQAL 94
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+ D +K Y+ V V + Y A G F+ + + + I +
Sbjct: 95 -DKYDWLKDYMWKAVQVDADKYTAATELGARSGYFIRSQPNTKLDIPVQACMYIGDDEVR 153
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
Q +IIA+E S ++ + GC+ + +N H V E A++ ++ V NW
Sbjct: 154 QTAHNIIIAEENSEINIITGCSTAKHVDNAAHIGVSEFYLKKGAKVTFTMVHNWAKEVDV 213
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ IS L YP+ G+ F SI
Sbjct: 214 RPRTGV-------IMEDNSTYISNYILAHPVRNLQSYPTAYANGDNCKVFFQSILAGKED 266
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
ID G++ + KN+ S ++++ IS S+ RG + + R +C L++ +
Sbjct: 267 SVIDQGSRTILKGKNSQSEMITRAISEDQSSIYTRGDL--VGMSPDVRGHLECMGLILSD 324
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+++P + ++++ L HEA KI++E + Y + RG+ EE A ++IV GF+ ++
Sbjct: 325 ESKIYSVPELRGESTNMELSHEAAVGKIAEEEIQYLMARGLTEEEAASMIVRGFLDIDIK 384
Query: 467 KLPMEFAVEAQKLIDISLEG 486
LP E A E + L+D+S+EG
Sbjct: 385 GLPDELAKETKNLMDMSMEG 404
>gi|85059412|ref|YP_455114.1| cysteine desulfurase activator complex subunit SufD [Sodalis
glossinidius str. 'morsitans']
gi|84779932|dbj|BAE74709.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 428
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 71/423 (16%), Positives = 127/423 (30%), Gaps = 48/423 (11%)
Query: 60 LAYRRW---LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
AY W + P+ + L A + T +
Sbjct: 30 EAYAHWRDVERLGLPTRQHEH---WKYTPLDGLLAHRFAPA-------------TARSVS 73
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+R+ L V VD F + L + V A+
Sbjct: 74 AAVRDALSLTLDAYRLVFVDGRFAPALSDSDT--GLWQIEVEEGAARRALP--------- 122
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERT 231
P+ + L ++ + + + +P+G L + R
Sbjct: 123 ----APIQPEVFLHLTESLSQETTRIRLPEGKAAQRPLYLLHISQGSEDKEALSTLHYRH 178
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
I + G+ +E + A L DNA + + +
Sbjct: 179 HIDIESGAQGQIIEHF-TSVDAQGHFSGARTTLAVGDNAHLSHIKLAFESRASYHFSHN- 236
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
G + + + G+ +T S L GE S S+ + +G D+
Sbjct: 237 -------DISVGRDAVVRSSTFILGAGLTRHQTSAQLNGEGSDLAINSLLLPSGQDISDT 289
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
T + H + SR + K I+ + G + V + A + ++LL+
Sbjct: 290 RTYLEHNKGHCLSRQLHKVIARDRGKGVFNGLIKVAKHALKTDGQMTNNNLLLDRLAEVD 349
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT +I +E +FY R I E A +I+ F EV++ + E
Sbjct: 350 TKPQLEIYADDVKCSHGATVGRIDEEQMFYLRSRAITRENAQQMIIYAFAAEVMEAIGHE 409
Query: 472 FAV 474
Sbjct: 410 GVR 412
>gi|126737787|ref|ZP_01753517.1| FeS assembly protein SufD [Roseobacter sp. SK209-2-6]
gi|126721180|gb|EBA17884.1| FeS assembly protein SufD [Roseobacter sp. SK209-2-6]
Length = 426
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 81/434 (18%), Positives = 143/434 (32%), Gaps = 48/434 (11%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R TM P+ D+ + Y P ++ +E
Sbjct: 30 RQAALSRVQTMGLPN---------RRDEYWKYTRPDTLTTGDVQK------AAVFETGEA 74
Query: 118 PI-REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ E + L V V D +L GV I++ C+ K
Sbjct: 75 PMFDEFDRLQIVFVDGVYSAEQSD----------DLSLEGVQIDRIADICCKDIHWAKDL 124
Query: 177 LS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
AALN+A DG +++ + ++ + +++ + +
Sbjct: 125 YGVLEARGQSPVQRPLAALNTAFAQDGVAIHVTG--KPSKPINFVYIHSDEASDAILHHV 182
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I + + + LE A R +E+ D ++ Q G +
Sbjct: 183 IRVEPDAEATILENGPAASRF-----NKCMEIDIADTGKLHLVRAQ----GRDHERRAAT 233
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ + G S L +T L G+ + + +G D
Sbjct: 234 HLFAR----LGTESVFKSFTLTVNGVLTRNEAVLELLGDDAIAHIAGACVGDGDFHHDDT 289
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H A N SR V K + + ++GK+ V A + + SLL+ ++
Sbjct: 290 VFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKPDAQKTDGYQISQSLLLDDDSQFLA 349
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H +T+ I +E LFY RG+P A L+ F+ E ++++
Sbjct: 350 KPELEIYADDVACSHGSTSGAIDEEALFYLRSRGVPAGEATDLLTLAFLAEAVEEIED-- 407
Query: 473 AVEAQKLIDISLEG 486
E I LEG
Sbjct: 408 -GEIADAIVARLEG 420
>gi|303235596|ref|ZP_07322203.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
gi|302484043|gb|EFL47031.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
Length = 447
Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats.
Identities = 86/435 (19%), Positives = 169/435 (38%), Gaps = 31/435 (7%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + T P+ RY + D+ AP + Q L+ + Y+
Sbjct: 30 RDKAFEDFKTQGFPTKKVERY---KYTDIPKLFAPDYGLNLQRLET----PINPYDSFK- 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V ++ V + + G++ I A +P+L++++
Sbjct: 82 --------CDVPNLSTSLYFVVNDQFYNKQLPKVQLNEGIVIDSICNAAKIYPELLEQHY 133
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIAD 236
+ + + A N+ + DG F+Y+PKG++ + + R LII +
Sbjct: 134 ARIADTSKDALTAFNTMLAQDGLFIYVPKGIKADRTIQVINILRSNVNLMVNRRVLIIIE 193
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ S L C D N L V+E DNA+++ + ++ + + + +Y
Sbjct: 194 EGAEASMLF-CDDSTDDRNFLTTQVIEAYVADNAKLELNCLEETHLKNVRVS-NVY---- 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ S++S + + +T RGE S I++ Q +D+ T +
Sbjct: 248 ---IEQQKNSRVSHNIITLHNGVTRNKLDLTFRGEGSECFLNGCVIADKHQHVDNNTVIN 304
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N +S + K + + + G + V + A + + ++ + +T P +
Sbjct: 305 HAVSNCSSNQLYKYVLDDHAVGAFAGLIYVAKDAQKTLSHEVNQNICAASTAHMYTQPML 364
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK---LPMEFA 473
E H +T +++D LFY QRGI + A L+ F+ EV+ K +P+
Sbjct: 365 EIYADDVQCNHGSTIGQLNDAALFYMQQRGIDKREAKLLLEFAFINEVIDKMELIPL--R 422
Query: 474 VEAQKLIDISLEGSV 488
L++ G +
Sbjct: 423 DRLHHLVEKRFRGEL 437
>gi|147920093|ref|YP_686148.1| putative Fe-S cluster assembly protein (SufB/D-like) [uncultured
methanogenic archaeon RC-I]
gi|110621544|emb|CAJ36822.1| putative Fe-S cluster assembly protein (SufB/D-like) [uncultured
methanogenic archaeon RC-I]
Length = 406
Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 12/384 (3%)
Query: 100 SLDDVDP-ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
L+ V P E + + +L ++E+ I AGV S F T + G+
Sbjct: 28 YLEQVPPREKITSLGELAKGVQERAIHAGVDASMKDRSGSFFMH-DQTVIHTTTMQEGLE 86
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
M I++A+ ++ D ++ Y +V + + A ++ G F+ G + L
Sbjct: 87 IMDINDALKKY-DWLQDYYFKLVQPDQDKFTAYSATHPVAGYFLRALPGAKIVFPLQACL 145
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ +G Q +IIA+EGS + GCT+ + LH + E DNA++ ++ V
Sbjct: 146 YMGREGMIQNVHNIIIAEEGSEFHIISGCTSDTHVTSGLHVGISEFYVKDNAKLTFTMVH 205
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
NW +S T YP ++ GE S +
Sbjct: 206 NWAEKVVVRPRSAT-------KMGKNAVFMSNYVCMTPVKDIQMYPGTVMEGENSIARYN 258
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+I ++ D G+K + AK + +V++ I+ RG + ++ +
Sbjct: 259 TIVYASPGSHFDLGSKAILKAKGCRAELVARTIAKDGGYVASRGL--IQGDVPDTKAHLE 316
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
C LL+G+ + +P + +L HEA KI++E + Y + RG+ + A ALIV
Sbjct: 317 CHGLLLGSGGVIYAVPELLGHVPGVDLSHEAAVGKIAEEEIQYLMSRGVDADTATALIVR 376
Query: 459 GFVREVLQKLPMEFAVEAQKLIDI 482
GF+ ++ LP + E ++ I++
Sbjct: 377 GFLDVDVKGLPPQLQAEMKRTIEL 400
>gi|315606717|ref|ZP_07881727.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
gi|315251572|gb|EFU31551.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
Length = 448
Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats.
Identities = 88/418 (21%), Positives = 162/418 (38%), Gaps = 30/418 (7%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + PS RY D L +P+ +L I
Sbjct: 31 RDKAFEDFCRQGFPSRKVERYRYTDMSKL-----------------FEPDYGLNLNRLEI 73
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
PI E V ++ V + + GVI + E+P L+++Y
Sbjct: 74 PINPYEAFKCDVPNLSTSLYFVVNDAFYTKQLPKTELPDGVIVDSLCRVATENPGLIERY 133
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-LIIA 235
+ + D+ ALN+ + DG VY+PK V+ + + R LII
Sbjct: 134 YARMAKTEDDSITALNTMLAQDGLLVYVPKNVKLDRAVQVINILRSDVDLMVNRRVLIIL 193
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ +L C D + L V+E +NA + ++ + +++ +Y
Sbjct: 194 EQGAEAKFLF-CDDSADDRHFLTTQVIEAYVGENASLDLYCLEETHVKNTRVS-NVY--- 248
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+++ + + +T + +GE + I++ Q++D+ T +
Sbjct: 249 ----IEQQAYSRVNHNVITLHNGVTRNKLDLVFKGEGAECFANGCVIADKTQRVDNNTLI 304
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + TS + K + + + G+V V A + + ++L+ +T P
Sbjct: 305 DHQVPHCTSNELYKYVLDDDAVGAFAGRVLVRHDAQKTNSQETNNNLVAAKTARMYTQPE 364
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
+E H T +++D +FY QRGI E+ A L+ FV EV+ K ME A
Sbjct: 365 LEIYADDVKCAHGCTVGQLNDAAMFYMRQRGISEKEAKLLLEFAFVNEVIDK--MELA 420
>gi|45358732|ref|NP_988289.1| SufBD protein [Methanococcus maripaludis S2]
gi|45047598|emb|CAF30725.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 418
Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats.
Identities = 89/398 (22%), Positives = 177/398 (44%), Gaps = 26/398 (6%)
Query: 85 DLYYYAAPKSIV-GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
DL Y PK + +SL D++ + + +G+ I E+ S V +S +
Sbjct: 29 DLSMYPTPKENLLKVESLKDLNEDHKQALANVGVDIEEK--------STVGSYVQVNSDA 80
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
+ + + +I MPI+EA+ + + Y V + D + A + T+G F+
Sbjct: 81 IYSKMYSD-----IILMPITEALEKFE--LDDYYWNAVQMSDKYGARVAK-ELTEGYFIR 132
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
PKGV+ + L T I + Q +II +EG+ ++ + GCT ++ LH V E
Sbjct: 133 APKGVKKTIPLQTCLLIGSEEVSQNVHNIIIVEEGAELNVITGCTTSPHVKSGLHLGVSE 192
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NA++ ++ + NW ++ I+ Y
Sbjct: 193 IYLEKNAKLTFTMIHNWGE-------NVHVRPRTAIKMDDDSIFINNYVTMMPVKSIQSY 245
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
P+ G+ + F +I G +D G++++ +N+ + ++S+ I + RG
Sbjct: 246 PTAYCEGKNAKATFQTIVYGKGSSNLDMGSRVILSGENSAADMISRVIVVDDAKVISRGH 305
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ ++ + +C L++ N+ +P +E++ + L HEA KI+++ + Y +
Sbjct: 306 LIGAE--SNVKGHLECRGLILSNDGHILAVPELEAEKTDLELSHEAAVGKIAEDQIQYLM 363
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
RG+ E+ A +LI+ GF+ + LP E A ++++D
Sbjct: 364 SRGLSEDEASSLIIKGFLSVDISGLPPELAKSVKEMMD 401
>gi|152995375|ref|YP_001340210.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
gi|150836299|gb|ABR70275.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
Length = 419
Score = 213 bits (543), Expect = 5e-53, Method: Composition-based stats.
Identities = 73/433 (16%), Positives = 147/433 (33%), Gaps = 39/433 (9%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
DW+ R A K P+ + A + L ++ V +D +
Sbjct: 17 DWLAPKRAHALELLANTKWPT---RKTEAWRYTPLRPVERTQAKVISDKIDLSPVAIADL 73
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK-KSGVIFMPISEAICEHP 170
V V+ FD + T E L G +A
Sbjct: 74 ----------------SAIELVFVNGQFDQAQLTKTLPEGLSISLGGDLGSAQQADA--- 114
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ + + + + +N A+ D + + +GV + + +G R
Sbjct: 115 ----LSVFSTIKPERHIFGLVNDALAQDVVVITVAEGVEITQPIRISSLL-SQGAESHTR 169
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ GS ++ +E A + A VE NA +++ + G
Sbjct: 170 VQVALAAGSRLTVIEDVQAQGES---FNTAFVEYNVAANARLEHYRFAMQTGSNVAIGGS 226
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+N +K++ T + GS ++ + GE + + ++ + +G + D
Sbjct: 227 HFNLH--------DHAKMNSTIVGFGSDLSRLDTDIIHAGEFADAKLNAMYLLDGKELFD 278
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ H N + + I A + + G++ +HR A + +LL+ +
Sbjct: 279 LHATVEHAMPNGKTEENVRCIVADRARAIFNGRIHIHRDAQKTLAELNNRNLLLSDKAEI 338
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+T P +E H AT ++I + L+Y RG+ A ++ GF+ E++ +P
Sbjct: 339 NTKPELEIYADDVKCAHGATVAQIDKQALYYLQTRGVSRSKAQVMLNFGFINELIDLMPN 398
Query: 471 EFAVEAQKLIDIS 483
E + I
Sbjct: 399 AALAEWIRPIIRE 411
>gi|146278394|ref|YP_001168553.1| SufBD protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556635|gb|ABP71248.1| SufBD protein [Rhodobacter sphaeroides ATCC 17025]
Length = 427
Score = 213 bits (543), Expect = 5e-53, Method: Composition-based stats.
Identities = 84/431 (19%), Positives = 150/431 (34%), Gaps = 44/431 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + D + + P DD + + ++L +
Sbjct: 30 RFDALARLTAMGLP---GRRDEYWRYTDPASFNRAEPFPAPTFDDDGEGMVFEGIDRLRL 86
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP---DLVK 174
V VD VFD+ + + L V +S A + +L
Sbjct: 87 ---------------VFVDGVFDAEA-----SDPLALDHVEIGLLSAAQSDIHWARELYG 126
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ +AALN+A T+G + + P ++ + + + I
Sbjct: 127 VLEARGQVPVKRPFAALNTAFATEGVLIRVTGY--VPRPIALIYIHSSDTSDAMLHHCIR 184
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G+ V+ LE A R V+E+ + + Q G + +
Sbjct: 185 VESGADVTILESGPAAARFTK-----VMEVDVAEGGRFHHIRAQ----GRDHDRRASTHI 235
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + L +T L G+++ A+ +G D
Sbjct: 236 FAR----VAGKGLFKSFTLTANGVMTRNEAVIELLGDEAVAHVAGAAMGDGRFHHDDTVF 291
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + SR V K + + ++GK+ V GA + + SLL+ + P
Sbjct: 292 VTHEGECCESRQVFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDGDSVFLAKP 351
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H +T+ I + LFY RG+P +AA +L+V F+ E +Q++ E
Sbjct: 352 ELEIYADDVKCSHGSTSGAIDETALFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENE--- 408
Query: 475 EAQKLIDISLE 485
E + I LE
Sbjct: 409 EIAEDIRQRLE 419
>gi|288925322|ref|ZP_06419256.1| FeS assembly protein SufD [Prevotella buccae D17]
gi|288337793|gb|EFC76145.1| FeS assembly protein SufD [Prevotella buccae D17]
Length = 448
Score = 213 bits (543), Expect = 5e-53, Method: Composition-based stats.
Identities = 88/418 (21%), Positives = 162/418 (38%), Gaps = 30/418 (7%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + PS RY D L +P+ +L I
Sbjct: 31 RDKAFEDFCRQGFPSRKVERYRYTDMSKL-----------------FEPDYGLNLNRLEI 73
Query: 118 PIREQEILA-GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
PI E V ++ V + + GVI + E+P L+++Y
Sbjct: 74 PINPYEAFKCDVPNLSTSLYFVVNDAFYTKQLPKTELPDGVIVDSLCRVATENPGLIERY 133
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT-LIIA 235
+ + D+ ALN+ + DG VY+PK V+ + + R LII
Sbjct: 134 YARMAKTEDDAITALNTMLAQDGLLVYVPKNVKLDRAVQVINILRSDVDLMVNRRVLIIL 193
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G+ +L C D + L V+E +NA + ++ + +++ +Y
Sbjct: 194 EQGAEAKFLF-CDDSADDRHFLTTQVIEAYVGENASLDLYCLEETHVKNTRVS-NVY--- 248
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+++ + + +T + +GE + I++ Q++D+ T +
Sbjct: 249 ----IEQQAYSRVNHNVITLHNGVTRNKLDLVFKGEGAECFANGCVIADKTQRVDNNTLI 304
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H + TS + K + + + G+V V A + + ++L+ +T P
Sbjct: 305 DHQVPHCTSNELYKYVLDDDAVGAFAGRVLVRHDAQKTNSQETNNNLVAAKTARMYTQPE 364
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
+E H T +++D +FY QRGI E+ A L+ FV EV+ K ME A
Sbjct: 365 LEIYADDVKCAHGCTVGQLNDAAMFYMRQRGISEKEAKLLLEFAFVNEVIDK--MELA 420
>gi|42521820|ref|NP_967200.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
gi|39574350|emb|CAE77854.1| Transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
Length = 419
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 73/438 (16%), Positives = 143/438 (32%), Gaps = 56/438 (12%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAA----PKSIVGPQSLDDVDPELLRTY 112
+R Y L P+ + + + P ++ + + E+ +
Sbjct: 23 FRKAGYDYALNKGLPT---RKDEDWHYTSVKTLNEGTFLPSAVNPVEPSHETLVEIKK-- 77
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
L GV ++ D +EL + F +A+
Sbjct: 78 -NLNPEFANIVFFNGVLNKTLSADLPAGVSL------KELSQYPAQFDDTFDAL------ 124
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT---GQFE 229
N A V + K ++ F + +G
Sbjct: 125 -------------------NGAYMAKPFLVTVAKETSVEKPVNFVFFTSAEGGPSLMVNP 165
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R + S V LE +V ++ ++A++ Y VQ
Sbjct: 166 RLSLDVGARSSVRVLESHYGKAGTT-YFANSVSDVHVGESAKLVYVRVQAESESAVN--- 221
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + + + TG+ ++ +L G S E + G Q +
Sbjct: 222 -----IGRTRLVVEKDANVESLAFATGARLSRHSLDVILNGPGSNTEILGVYAVRGNQHV 276
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D+ + + H + + KGI G S + G V + +GA + + ++LL+
Sbjct: 277 DNTSLINHKVGECNTNQLYKGILDGESRAVFCGTVRIEKGAQKANSAQLNNNLLLSGKAE 336
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
A + P ++ H +T +++ E LFY R IP+E AI ++ G++ EV+ K+
Sbjct: 337 ADSKPCLQIYADDVKAAHGSTVGQLNREELFYLQSRAIPKEKAIPMLSYGYLSEVIYKIS 396
Query: 470 MEFAVEAQKLIDISLEGS 487
E QK + L+ +
Sbjct: 397 DEN---IQKWLSRHLDEA 411
>gi|254447152|ref|ZP_05060619.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
gi|198263291|gb|EDY87569.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
Length = 439
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 81/426 (19%), Positives = 151/426 (35%), Gaps = 32/426 (7%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P + +WR A + P+ R + Y A Q+ +
Sbjct: 24 PAPLAKWRDEAAPHLSALTLPT---RRTENWKY---SYRALKLDDQIAQTRTNAPQ---- 73
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T +P G+ V + D + + G+ + SE
Sbjct: 74 TDSADSVPHH------GLGYRLVIRNGWIDRSASRLPQQS-----GIELLAFSELDDLQA 122
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ L + + A LN A DG + + KG L Y I+ + R
Sbjct: 123 QALAGKLGSCLDAKTTQLAVLNQAHLADGLVIRLAKGAVLDQPL--YLAIHGDAGASYPR 180
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ A E S ++ +E + + + L A VE+ NA + + +
Sbjct: 181 IWLEAAENSQIAVVEEY-SSEGADPTLTNAAVEMTLAANAHVNWVRLALEAEHSQHIGAT 239
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
G +++ + G + L + + +A++ G Q D
Sbjct: 240 --------GAVLAQHARLEHHHIGFGGQLRRHDLQVRLEESGAECKLNGVAVTQGRQHFD 291
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ T + H+A + S + I+A S+ + G++ +H+ A S +LL+ N
Sbjct: 292 NHTVIEHIAPHCNSEETYRNIAADRSHAIFNGRIHIHQDAQKSLAEMNNKNLLLSNGAEI 351
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT ++ ++ LFY + RGI A AL+ F+ E++ ++P+
Sbjct: 352 DTKPELEIYADDVKCAHGATIGRLDEKSLFYLVARGINRLDAKALLSMAFINELVDEVPI 411
Query: 471 EFAVEA 476
+ EA
Sbjct: 412 DNVREA 417
>gi|253688824|ref|YP_003018014.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755402|gb|ACT13478.1| FeS assembly protein SufD [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 448
Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats.
Identities = 50/290 (17%), Positives = 102/290 (35%), Gaps = 12/290 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG---QFERTLIIADEGSYVSYLEG 246
L ++ + + + + G + L + + R + + G+ +E
Sbjct: 148 HLTESLASTSTLIRLAAGQQAEKPLYLLHISSSQAAALNTVHHRHHLNVERGASAEIIEH 207
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
+ A + + A +N+++ + + +
Sbjct: 208 Y-VSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAASYHFAHN--------DLVLARDA 258
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
++ G+ +T + S L GE + S+ + G + D+ T + H SR
Sbjct: 259 RVRSHSFLLGAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYGESRQ 318
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+ K I + + G + V A + ++LL+G T P +E
Sbjct: 319 LHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCS 378
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT ++ +E LFY RGI E+ A +I+ F EV + + E +
Sbjct: 379 HGATIGRMDEEQLFYLRSRGITEQDAQQMIIFAFAAEVTEAIENESLRDV 428
>gi|299133788|ref|ZP_07026982.1| FeS assembly protein SufD [Afipia sp. 1NLS2]
gi|298591624|gb|EFI51825.1| FeS assembly protein SufD [Afipia sp. 1NLS2]
Length = 436
Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats.
Identities = 80/420 (19%), Positives = 148/420 (35%), Gaps = 31/420 (7%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P R + DL + + P + E LGI
Sbjct: 34 RKAAFDDFAERGLP---HRRIEEWKYTDLRALLRTVAPLAPSPEKAALALAAKAVEALGI 90
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE-HPDLVKKY 176
+ L D V + GV + EA+ E D +K
Sbjct: 91 ENTCRLTLV-------------DGVFAPELSDLATLEKGVRVQTLREALGEGKTDRLKTK 137
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+++ + +LN A+ TDG V + V + R+ +
Sbjct: 138 VAS------DAMISLNGALATDGVIVTVDNNVTLSRPIHIAHVATASSASVVTRSHVRIG 191
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ V+ +E + VE+ D+AE+++ + + +T
Sbjct: 192 NKTRVTLVESFVGAEGAATYQVHDQVEVSIGDDAELQHVRLMEDARDAAN--------IT 243
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G R+K++ L G+A++ GE S + + + D+ +
Sbjct: 244 TAAFRLGARTKLNSFGLTQGAAVSRYQGFITFAGEGSELSTNGVNLLGSRRHGDTTLVVD 303
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N SR V + + S++ ++G++ V + A + +LL+ ++ A P +
Sbjct: 304 HAVPNCISREVFRAVLDDQSHSVFQGRIIVRQDAQKTDGKMMTRALLLSDDTEADNKPEL 363
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H AT I +E LFY RG+PE+ A L++ FV E ++ + E +
Sbjct: 364 EIFADDVACGHGATAGAIDEELLFYLRARGLPEKEAQGLLIAAFVGEAIESIVDEGLRDI 423
>gi|322833499|ref|YP_004213526.1| FeS assembly protein SufD [Rahnella sp. Y9602]
gi|321168700|gb|ADW74399.1| FeS assembly protein SufD [Rahnella sp. Y9602]
Length = 433
Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats.
Identities = 70/420 (16%), Positives = 130/420 (30%), Gaps = 45/420 (10%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+++ L + P + + + PQ ++ L E
Sbjct: 41 WQQVLRLGFP---HAKLEDWKYTPVSSLLG-NQFFAPQQQALTVEKIKSLALPL-----E 91
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V A + D+ + A PD
Sbjct: 92 CYRLVFVDGRFDASLSDSDTGAFEIE------------KLSPSAQQTLPD---------- 129
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-----FERTLIIAD 236
P+ + L ++ D V +P G L + + + R + +
Sbjct: 130 PIQSEVFLHLTESLAQDSFSVRLPVGKHAEKPLYLLHLSSGRDQSREMNTVHHRYHLAIE 189
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ +E + A + + DNA+ + +
Sbjct: 190 NGANAEVIEHYLSLNDQG-HFTGARMTINVGDNADFTHYKLAFESQASFHFSHN------ 242
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G +++S G+ +T S L GE S + S+ + + D+ T +
Sbjct: 243 --DLVIGRDARVSSHSFLLGAGLTRNNTSAQLNGENSNLDINSLVLPVDSEIADTRTYLE 300
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H S+ + K I + + G + V + A + ++LL+G + T P +
Sbjct: 301 HNKGYCNSKQLHKVIVNDRAKAIFNGMIKVAQHALKTDGKMTNNNLLLGKHTEVDTKPQL 360
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H AT +I DE LFY RGI + A +I+ F E+ + + E E
Sbjct: 361 EIYADDVKCSHGATVGRIDDEQLFYLRTRGISGQDAQQMIIFAFAAELTEAIKNETLREV 420
>gi|163731803|ref|ZP_02139250.1| FeS assembly protein SufD, putative [Roseobacter litoralis Och 149]
gi|161395257|gb|EDQ19579.1| FeS assembly protein SufD, putative [Roseobacter litoralis Och 149]
Length = 426
Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 152/437 (34%), Gaps = 43/437 (9%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W R A R + M P D+ + Y P S+ P ++ +
Sbjct: 25 WSQTARKDALSRVIAMGLPERK---------DEYWRYTRPDSLTQPGAIPAALFHNDESP 75
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP-- 170
+ + V VD VFD+ + ++L G+ ++EA +
Sbjct: 76 LFGEVE----------RIKIVFVDGVFDADA-----SDDLTLEGLTIERLAEANTDIHWA 120
Query: 171 -DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
DL + AALN+A TDG +++ + ++ + + +
Sbjct: 121 RDLYGVLETNGQTPVHRPLAALNTAFATDGVLIHVTG--KVSKPINLQYHHRSETSDAIL 178
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
+I D G+ V+ LE A R V+E+ D + Q G +
Sbjct: 179 HHVIRVDTGAEVTILESGPAAARF-----NKVMEVDVADQGVFHHVRAQ----GRDHERR 229
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ T+ G S L +T L+G+ + + +G
Sbjct: 230 AATHIFTR----LGQESVFKSFTLTANGVMTRNECIIELKGDDAVAHVAGACVGDGDFHH 285
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + H A N SR V K + + ++GK+ V +GA + + SLL+ +
Sbjct: 286 DDTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKQGAQKTDGYQISQSLLLDEDSQ 345
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +E H +T+ I + LFY RGIP A L+ F+ E + ++
Sbjct: 346 FLAKPELEIYADDVACSHGSTSGAIDETALFYLRSRGIPHGPATDLLTLAFLAEAVDEIE 405
Query: 470 ME-FAVEAQKLIDISLE 485
E E + LE
Sbjct: 406 DETLRAEIVDRLAGWLE 422
>gi|149002407|ref|ZP_01827341.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS69]
gi|147759344|gb|EDK66336.1| FeS assembly protein SufB [Streptococcus pneumoniae SP14-BS69]
Length = 169
Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats.
Identities = 75/169 (44%), Positives = 106/169 (62%)
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
KYPS L GE + G SIA +N Q D+G KM+H A +T+S IVSK I+ G Y
Sbjct: 1 MKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDY 60
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG+V+ ++ + S + +CD++++ + + TIP+ E NS LEHEA SKIS+E L+
Sbjct: 61 RGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQVALEHEAKVSKISEEQLY 120
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
Y + RG+ E A +IV GFV ++LPME+AVE +LI +EGSVG
Sbjct: 121 YLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG 169
>gi|295096073|emb|CBK85163.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 423
Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats.
Identities = 71/414 (17%), Positives = 140/414 (33%), Gaps = 48/414 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L ++ E + ++ R+
Sbjct: 33 LQQMLRLGLPT---RKHENWKYTPL--------------DGLLNGEFVTRLAQVSPDQRD 75
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L+ V VD +F + + +++SG + E S
Sbjct: 76 MLALSVDAVRLVFVDGLFRAE-----LSDSVQESGFDIVINDE-----------RQSLNA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ + + + + R L +E T + L
Sbjct: 120 PVQPEVFLHLTESLSQSVTHIRVKRNQRPAKPLLLMHITQGVEGDEINTAHYRHHL-ELA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + + + + + NA++ + + P
Sbjct: 179 EGAEATVIEHYVSLNDTRHFTGSRLT-MNVAANAQLHHIKLAFENPLSHHFAHN------ 231
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + G A+ S L GE + S+A+ + D+ T +
Sbjct: 232 --DILLGQDAAAYSHSFLLGGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
E H AT +I DE +FY RGI ++AA +I+ F E+ + LP
Sbjct: 350 EIYADDVKCSHGATVGRIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALPD 403
>gi|294495672|ref|YP_003542165.1| SufBD protein [Methanohalophilus mahii DSM 5219]
gi|292666671|gb|ADE36520.1| SufBD protein [Methanohalophilus mahii DSM 5219]
Length = 407
Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats.
Identities = 89/403 (22%), Positives = 168/403 (41%), Gaps = 25/403 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
D D Y APK +L ++D + RT +G+ + G S V VD
Sbjct: 23 EKFDLD--KYSIAPKETKYTDNLKELDEKSQRTLLNVGVIPSGE----GRGGSLVMVDNA 76
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
SV + MP+ A+ + D +K Y +VPV + Y A + +
Sbjct: 77 ISHSSV--------SDKEIELMPLHFAMQK-HDWLKDYSWNLVPVDADKYTATSYLENAN 127
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G F+ P+GV+ + + T + K Q ++I +E + + + GC+ + +H
Sbjct: 128 GYFIRAPEGVKTKLPIQTCLLMGSKDVSQTVHNIVIVEENARLDVITGCSTSSDVDKAMH 187
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ E+ + ++ + NW + + + I+
Sbjct: 188 LGISEMYVKKGGTLNFTMIHNWAEQIGVRPRTVIHL-------EEGATFINNYVTLKAVK 240
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP+ L G+ + F +IA+++ ++D G++++ A NT + +VS+ I+ G
Sbjct: 241 SIQSYPTARLTGKGAFARFNTIAVAHPGSELDIGSRVIFDAPNTKAELVSRTITTGG-TV 299
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
RG++ + S+ +C L++ IP +E+ L HEA +I+ E
Sbjct: 300 IARGEMIGNE--VQSKGHLECHGLVLSKKGTQRAIPILEANVDDIELTHEAAVGRIAREQ 357
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ Y + RG+ EE A+ +IV GF+ + +P E + + I
Sbjct: 358 VEYLMARGLSEEDAVGMIVRGFLDVGISGIPDELQKDIDETIA 400
>gi|126728561|ref|ZP_01744376.1| FeS assembly protein SufD [Sagittula stellata E-37]
gi|126710491|gb|EBA09542.1| FeS assembly protein SufD [Sagittula stellata E-37]
Length = 425
Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats.
Identities = 84/428 (19%), Positives = 152/428 (35%), Gaps = 45/428 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + P +L+ V+ E
Sbjct: 30 RQDALTRLQAMGLP---GARDEYWKYT------------RPDTLNAVEAPAATALEAHEA 74
Query: 118 PI-REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA--ICEHPDLVK 174
P+ E++ L V VD VFD+ + ++L GV ++EA I D+
Sbjct: 75 PLFGERDRL-----RIVFVDGVFDAEA-----SDDLSMEGVTIERLAEARDIHWAKDVYG 124
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ +A LN+A TDG +++ + + + + + ++
Sbjct: 125 VLEARGQTPVQRPFAVLNTAFATDGLLIHVTG--KVAKPIHINYVHKGETSDAMLHHVVK 182
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
D G+ ++ LE A R V+E+ D + + Q G + + +
Sbjct: 183 VDAGADLTILENGPAAARF-----NHVMEVEIADKGALHHVRAQ----GRDHDRRAVTHV 233
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G+ S L +T G+ + + +G D
Sbjct: 234 FAR----LGVESTFKSFTLTVNGGLTRNECVIEFTGDDAVAHVAGACMGDGSFHHDDTVF 289
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H A N SR V K + + ++GK+ V A + + SLL+ + P
Sbjct: 290 VTHDAVNCESRQVFKKVLRNGAVGVFQGKILVKPDAQKTDGYQISQSLLLDEDSQFLAKP 349
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H +T+ I ++ LFY RG+P AA ++ F+ E Q++ E
Sbjct: 350 ELEIYADDVACSHGSTSGAIDEDSLFYLRARGVPRGAAEDMMTIAFIAEATQEIEDESLR 409
Query: 475 EAQKLIDI 482
E +L++
Sbjct: 410 E--ELVER 415
>gi|84503545|ref|ZP_01001596.1| FeS assembly protein SufD [Oceanicola batsensis HTCC2597]
gi|84388035|gb|EAQ01083.1| FeS assembly protein SufD [Oceanicola batsensis HTCC2597]
Length = 433
Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats.
Identities = 89/438 (20%), Positives = 149/438 (34%), Gaps = 44/438 (10%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W R A R + P R F P+++ P+ + T
Sbjct: 31 WTAAARASALDRVVQSGLP---HARDEYWKFT------RPEALTAPEPSEAALFAAEETP 81
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
I + V VD VFD+ + + +GV +++A
Sbjct: 82 IFQKID----------RVRLVFVDGVFDADA-----SDAPDLAGVRIERLAKAAEADIHW 126
Query: 173 VKKYLSTV----VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
K T+ AALN+A DG +++ + +S + +
Sbjct: 127 AKSLYGTLEANGQAPVSRPLAALNTAFADDGVLIHVTG--KADRPVSIAYERRDGTADAM 184
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+I D G+ + LE A R V+E+ D A + Q G +
Sbjct: 185 LHHVIKLDPGADFTLLENGPAAARF-----NKVMEVDIADGAAFHHVRAQ----GRDHER 235
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ + G S L +T L G+ + + +G
Sbjct: 236 QAATHIFAR----LGQESVFKSFTLTANGRLTRNDCVIDLTGDDAVAHVAGACVGDGDFH 291
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D + H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 292 HDDTVFVTHDAVNCESRQVFKKVLRNGATGVFQGKILVREGAQKTDGYQISQSLLLDGDS 351
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H +T+ I +E LFY RG+PE+ A L+ F+ E +Q++
Sbjct: 352 QFLAKPELEIYADDVACSHGSTSGAIDEEALFYLRSRGVPEDRATDLLTLAFLAEAVQEI 411
Query: 469 PME-FAVEAQKLIDISLE 485
E A E ++ LE
Sbjct: 412 EDEALAGEILTRLEAWLE 429
>gi|258405125|ref|YP_003197867.1| SufBD protein [Desulfohalobium retbaense DSM 5692]
gi|257797352|gb|ACV68289.1| SufBD protein [Desulfohalobium retbaense DSM 5692]
Length = 390
Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats.
Identities = 82/379 (21%), Positives = 152/379 (40%), Gaps = 17/379 (4%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ + ++Q +++GV S+ + + + GV + I +A+ E
Sbjct: 24 ITDLRHMSDEDKQQLLMSGVDVSEEGRSGTY-LHVNQSQVHCSSCQPGVEVLDIKQAL-E 81
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
D + Y V + Y + G F+ KG + + + I + GQ
Sbjct: 82 KYDGLPDYYFQAVDKNKDEYTQAVAEKLHGGYFIRTEKGAKILDPVQSCLFIKGENVGQN 141
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+I+ +E S + + GC +N LH V E ++ ++ V NW
Sbjct: 142 VHNIIVVEEDSELHIITGCAVSHGVQNALHLGVSEFYVKKGGKLTFTMVHNWGEQVKVRP 201
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ G ++ L YP+ L GE F S+ ++
Sbjct: 202 RTV-------GIVEEDGVFMNNYVLMKPVYSVQSYPTVYLNGENGVATFNSVLVAPPGSY 254
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
I+SG++++ A +T I+S+ I+ G + + A +R +C L++ +
Sbjct: 255 INSGSRIVLNAPHTRGEIISRTITTGGTIV---APGHIVGNAVPARGHLECKGLIL-EDG 310
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H IP +E + L HEA KI+ E + Y + RG+ E+ A + IV GF+ + L
Sbjct: 311 VIHAIPELEGSVTGVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFLNMDVSGL 370
Query: 469 PMEFAVEAQKLIDISLEGS 487
P E Q++I+ ++E S
Sbjct: 371 PDE----LQQMIEKTIEES 385
>gi|183598856|ref|ZP_02960349.1| hypothetical protein PROSTU_02288 [Providencia stuartii ATCC 25827]
gi|188021063|gb|EDU59103.1| hypothetical protein PROSTU_02288 [Providencia stuartii ATCC 25827]
Length = 434
Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats.
Identities = 70/423 (16%), Positives = 134/423 (31%), Gaps = 50/423 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + + P + + L+ ++ + L E
Sbjct: 47 WEKAKQVGLPVFRHED---WHYTPLH--------------SVLNTHYRFAEQDLDEKACE 89
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD + S + P A+ + D++ +++ +
Sbjct: 90 ALALPIDAYRIVLVDGRYSSTLSS-----------IDMGPFQVALLDSQDMLPDAVNSEI 138
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTLIIADE 237
+ L ++ +++ L + R I D
Sbjct: 139 ------FLHLTESLAQQPIVIHLGANQIAQKPLYLLNISSGSDGDTVNTSQYRYHITLDA 192
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S +E D+ + + DNA+ ++ + N
Sbjct: 193 NSKAQVIEHF-VSFNDKAHFTGGRLTVEVGDNAQYQHFKLNNENNVAQHFAHN------- 244
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S++ + G A+T + S L GE S+ + + +D+ T + H
Sbjct: 245 -DIVVGRDSQVLSSSFLLGGALTRHHTSAQLMGENGHFSLNSLLLPKDSEIVDTRTYLEH 303
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I+ S + G + V A + +LL+G+ T P +E
Sbjct: 304 NVGQCESRQLHKVIAMDGSKAVFNGMIKVAPNALKTDGQMSNHTLLLGDKAEVDTKPQLE 363
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +I DE LFY RGI +AA +I+ F E+ + + E E +
Sbjct: 364 IYADDVKCGHGATVGRIDDEQLFYLRSRGIDGKAAKHMIIIAFAAELTESIENE---ELK 420
Query: 478 KLI 480
+ +
Sbjct: 421 QAV 423
>gi|310767546|gb|ADP12496.1| FeS assembly protein SufD [Erwinia sp. Ejp617]
Length = 426
Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats.
Identities = 59/299 (19%), Positives = 104/299 (34%), Gaps = 13/299 (4%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ----FERTLIIADE 237
PV + L ++ + + + +G L + TG+ R + DE
Sbjct: 123 PVHPEVFLHLTESLAEQVTLIQLARGKAAARPLYFLHISSGSSTGELNTSHYRHHLQLDE 182
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ + +E E A +NA + + +
Sbjct: 183 AAEATVIEHY-VSLDAEPHFTGARFTAEVGNNAALTHYNLAFEDCRSYHFSHNDLTL--- 238
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+++ G+ +T + S L GE S S+ + + DS T + H
Sbjct: 239 -----ERDTRVQSHSFLLGAGLTRHHTSTRLNGEGSDLAINSLMLPMDKEVCDSRTWLEH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + + G + V + A + ++LL+G T P +E
Sbjct: 294 NKGYCQSRQLHKTIVRDRARAVFNGIIKVAKHALKTDGQMSNNNLLLGRLAEVDTKPQLE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +I +E +FY RGI E AA +I+ F E+ + + E EA
Sbjct: 354 IYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEA 412
>gi|254476410|ref|ZP_05089796.1| SufBD [Ruegeria sp. R11]
gi|214030653|gb|EEB71488.1| SufBD [Ruegeria sp. R11]
Length = 426
Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 147/437 (33%), Gaps = 46/437 (10%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A R TM P+ R + P +L D ++
Sbjct: 26 LAEARKAALSRVQTMGLPN---RRDEYWKYT------------RPDTLVQADAPTAAVFD 70
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
P+ ++ + V VD VFD+ + ++L G+ I++ +
Sbjct: 71 AGEAPMFDE----FDRLKVVFVDGVFDAEA-----SDDLSLEGISIERIADICDKDIHWA 121
Query: 174 KKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
K AALN+A DG + + ++ +R +
Sbjct: 122 KDLYGVLEARGQTPVARPLAALNTAFAQDGVVIRVTGT--PSKPVNLVYRHGSDSSDAIL 179
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
++ + G+ + LE A R +E+ D + Q G +
Sbjct: 180 HHVVRVESGASATILENGPAASRF-----NKCMEVDVADGGALHLVRAQ----GRDHERR 230
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + G S L +T L G+ + + +G
Sbjct: 231 AATHLFAR----LGTESVFKAFTLTVNGVLTRNEAVIELTGDDAVAHIAGACVGDGDFHH 286
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + H A N SR V K + + ++GK+ V GA + + SLL+ ++
Sbjct: 287 DDTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDDDSQ 346
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +E H +T+ I +E LFY RG+P + A L+ F+ E ++++
Sbjct: 347 FLAKPELEIYADDVACSHGSTSGAIDEEGLFYLRSRGVPTDVATDLLTLAFLAEAVEEIE 406
Query: 470 MEFAVEAQKLIDISLEG 486
E + LEG
Sbjct: 407 D---DEIAAALVARLEG 420
>gi|227111736|ref|ZP_03825392.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 448
Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 102/290 (35%), Gaps = 12/290 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG---QFERTLIIADEGSYVSYLEG 246
L ++ + + +++ G + L + + R + + G+ +E
Sbjct: 148 HLTESLASTSTLIHLAAGQQAEKPLYLLHISSSQEAALNTVHHRHHLNVERGASAEIIEH 207
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
+ A + + A +N+++ + + +
Sbjct: 208 Y-VSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHN--------DLVLARDA 258
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
++ G+ +T S L GE + S+ + G + D+ T + H SR
Sbjct: 259 RVRSHSFLLGAGLTRHNTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYGESRQ 318
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+ K I + + G + V A + ++LL+G T P +E
Sbjct: 319 LHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCS 378
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT ++ +E LFY RGI ++ A +I+ F EV + + E +
Sbjct: 379 HGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDV 428
>gi|163746296|ref|ZP_02153654.1| FeS assembly protein SufD, putative [Oceanibulbus indolifex HEL-45]
gi|161380181|gb|EDQ04592.1| FeS assembly protein SufD, putative [Oceanibulbus indolifex HEL-45]
Length = 426
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/412 (20%), Positives = 140/412 (33%), Gaps = 42/412 (10%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W R A R TM P R F P + + + +L
Sbjct: 25 WAQAAREDALARVRTMGLPQ---RRDEYWKFT------RPDT---LTQAEALPAAILDHG 72
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP-- 170
+ E+ + V VD VFD+ + ++L GV ++ A +
Sbjct: 73 DAPLFDDTERLRI-------VFVDGVFDAEA-----SDDLSLEGVKIERLAAANTDLHWA 120
Query: 171 -DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
DL AALN+A TDG +++ + ++ + + +
Sbjct: 121 RDLYGALEKNGQTPVARPLAALNTAFATDGVLIHVTG--KPSKPINLVYHHKSETSDAML 178
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
++ D G+ V+ LE A R V+E+ D A + Q G +
Sbjct: 179 HHVVKLDTGAEVTLLENGPAAARF-----NTVMEVDVADTARFHHVRAQ----GRDHERR 229
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ T+ G S + A+T L G+ + + +G
Sbjct: 230 AATHLFTR----LGTESLFKSFTVTVNGAMTRNECVIELTGDDASAHVAGACVGDGDFHH 285
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 286 DDTVFITHDAVNCESRQVYKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDGDSQ 345
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
P +E H +T+ I +E LFY RG+ A L+ F+
Sbjct: 346 FLAKPELEIYADDVACSHGSTSGAIDEEALFYLRARGVSHAEATDLLTLAFL 397
>gi|209545424|ref|YP_002277653.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|209533101|gb|ACI53038.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
Length = 430
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 85/430 (19%), Positives = 147/430 (34%), Gaps = 46/430 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A P R A + L A P D + +
Sbjct: 37 RDRAAALLRASGLP---RTGVEAWKYTSLRALADIPFAAAPARPDMAAVHAI-------V 86
Query: 118 PIREQEI-LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E+E L V VD FD+ GV + A E
Sbjct: 87 AEAEREFALDADLPRAVVVDGRFDAALSRLP-------DGVTVTRL-TARDE-------- 130
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC-PMELSTYFRINEKGTGQFERTLIIA 235
+P D+ ALN+ + DG +++ GV M L + + R I+
Sbjct: 131 ----LPPYDDVATALNTLLADDGLVLHVGPGVDAGRMLLLSVTVADSAPLSVHPRHRIVL 186
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+G+ +S L+ LH V ++ DNA + ++ +Q P +
Sbjct: 187 DQGARLSVLD---LAVGRGAYLHNPVFDITVADNAALIHAKLQAEDPAAQH--------L 235
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G + L G+++ L E + +G Q D + +
Sbjct: 236 AVIHAEVGAGASYDSFTLTLGASLARHEVHARLAAEGGIVHVNGAQLLDGRQVADLTSVI 295
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A SR K + +G + ++GK+ V R A + + +LL+ + P
Sbjct: 296 THAAPACNSRQTVKNVLSGHARGVFQGKILVERIAQKTDGYQMNQALLLSDTAEIDAKPE 355
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT + + LFY RG+ E A A++V F+ + ++ + E
Sbjct: 356 LEIYADDVRCSHGATVGALDPDQLFYLRSRGVAEHEARAILVKAFLHDAVELIGDES--- 412
Query: 476 AQKLIDISLE 485
+ ++D ++E
Sbjct: 413 LRAVLDRAVE 422
>gi|197285272|ref|YP_002151144.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis HI4320]
gi|227355702|ref|ZP_03840095.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
gi|194682759|emb|CAR42981.1| subunit of cysteine desulfurase activator complex [Proteus
mirabilis HI4320]
gi|227164021|gb|EEI48918.1| cysteine desulfurase activator complex subunit SufD [Proteus
mirabilis ATCC 29906]
Length = 435
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/440 (18%), Positives = 151/440 (34%), Gaps = 53/440 (12%)
Query: 37 NEDIIRFISA----KKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP 92
N+ ++ SA +K E + L A WL ++ ++ +PA +D +Y P
Sbjct: 21 NQQALKQFSALYQQRKGEDN------LNARNHWLQVE-----KVGFPAYRHEDWHY--TP 67
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
Q + P ++ + EQ L+ V V+ F F
Sbjct: 68 LDETLSQQYQMLPPFEVQD-------LIEQRALSFDCYRIVMVNGAFSPAESSQDFGPYQ 120
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
+ +L + V + L ++ F+ + KGV
Sbjct: 121 V----------TLLDNQSELPQAINGEV-------FLHLVESLAQQPLFITLKKGVVADK 163
Query: 213 ELSTYFRIN----EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
L ++ R + + + +E + + A + D
Sbjct: 164 PLYILNITQGHAGQEVNSANYRFHLDVGANAQMQVIEHYISSDGENRHFTGARLTATIGD 223
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
NA + + + GI G ++++ G+ ++ + S L
Sbjct: 224 NASFNHIKL--------GFENGISQHFAHNDLSIGRDARVNSYAFLLGNKLSRHHTSAAL 275
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
GE S S+ + + D+ T ++H KN SR + K I+ + G ++V
Sbjct: 276 TGENSELSMNSVVLPKANEIADTRTWLVHGEKNCLSRQLHKSIAMDAGKAVFNGMITVTP 335
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
A + ++LL+G+ T P +E H AT +I DE LFY RGI
Sbjct: 336 QALKTDGQMTNNNLLLGDKAQIDTKPQLEIYADDVKCSHGATVGRIDDEQLFYLRSRGIA 395
Query: 449 EEAAIALIVNGFVREVLQKL 468
A +I++ F E+ + L
Sbjct: 396 LSEARKMIIHAFAAELTESL 415
>gi|281413858|ref|ZP_06245600.1| Iron-regulated ABC transporter membrane component SufB [Micrococcus
luteus NCTC 2665]
Length = 233
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 84/223 (37%), Positives = 138/223 (61%), Gaps = 10/223 (4%)
Query: 4 VRETVDKVRKID-VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
++E +DK +++ + Y+YG+ +++ +KA +GLNED++R IS KK+EP+WM RL A
Sbjct: 19 IQEILDKNPELNAIGAYQYGWADSDAAGEKAVRGLNEDVVRDISGKKDEPEWMRNLRLKA 78
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+W IDFD++ Y+ ++ +D+ ++ TYE+LGIP E
Sbjct: 79 LKYFERKPMPAWGP-DLSGIDFDNIKYFVRSTEGQA-KTWEDLPEDIRNTYERLGIPEAE 136
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L V A ++S V +E+L++ GV+F+ A+ EHP++ ++Y TV+
Sbjct: 137 RERLV------AGVAAQYESEVVYHQIREDLEEQGVVFLDTDTALKEHPEIFEEYFGTVI 190
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
PVGDN +A+LN+AV++ GSFVY+PKGV + L YFRIN +
Sbjct: 191 PVGDNKFASLNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTEN 233
>gi|126736364|ref|ZP_01752106.1| FeS assembly protein SufD, putative [Roseobacter sp. CCS2]
gi|126714185|gb|EBA11054.1| FeS assembly protein SufD, putative [Roseobacter sp. CCS2]
Length = 429
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/434 (18%), Positives = 148/434 (34%), Gaps = 47/434 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P+ + D L AAP++ + +
Sbjct: 32 RADAMARVRQMGLPTKRDEYWKYTDPTSLTTLAAPEAALFRNDEGPLFD----------- 80
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
A + V VD VFDS + ++L GV +++A+ K
Sbjct: 81 --------AVDRVKIVFVDGVFDSEA-----SDDLSAEGVEIDRLADAMTTDIHWAKDLY 127
Query: 178 S----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
D AALN+A+ TDG + + + ++ + + ++
Sbjct: 128 GVLESRGQTPVDRPLAALNTALATDGVVIRVTG--KATKPINFIYLHKNVSSDAILHNMV 185
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ G+ V+ LE A R + ++E+ + + Q G + + +
Sbjct: 186 KVEAGAEVTLLETGPAAARF-----SKLLEVDVAEGGTFHHIRAQ----GRDHERRAVTH 236
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-FQQIDSG 352
S L +T + G+ + + + +G D
Sbjct: 237 ----CFARIAANSTFKSFTLTFNGVLTRNECVLEIVGDDAVAHVAGVCVGDGTDFHHDDT 292
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H A N SR V K + + ++GK+ V GA + + SLL+ ++
Sbjct: 293 VFITHDALNGESRQVFKKVLRNGATGVFQGKILVKAGAQKTDGYQISQSLLLDDDSVFLA 352
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H +T+ I + LFY RG+ + A L+ F+ E L ++ E
Sbjct: 353 KPELEIYADDVACSHGSTSGAIDETALFYLRSRGVSHDDARNLLTLSFLAEALDEIEDEG 412
Query: 473 AVEAQKLIDISLEG 486
E + LEG
Sbjct: 413 LSE---ELRDRLEG 423
>gi|312115588|ref|YP_004013184.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
gi|311220717|gb|ADP72085.1| FeS assembly protein SufD [Rhodomicrobium vannielii ATCC 17100]
Length = 441
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 76/417 (18%), Positives = 140/417 (33%), Gaps = 30/417 (7%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
WR A + + P + D L P + + DVD + R
Sbjct: 38 RAWREEALDAFAVLGVPHRRVEAWKYTDLRALMTAVHPLGGLDAGARADVDASIGRALAN 97
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
+ + + AG + T +LK ++ D+V
Sbjct: 98 ID---SYRAVFAGGKFRPDLSTIQGAPGISFTPLCAKLKSEADAAAALAALPLPKGDVV- 153
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
AAL++A T G+ + I G + + + + R I
Sbjct: 154 --------------AALSTAFATCGALISIAPGKKIDKPIHLIVIASSEANAYALRHAIK 199
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ + +E + + L A +K++ + +
Sbjct: 200 LGDGAEATIIETHVGAGASQAWSY---TALDIGKGAALKHARLTQSAAALHLASATVT-- 254
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G R+ T G A+T + G + + ++ G +D
Sbjct: 255 -------LGERAVYEPTHAAIGGALTRSEGTIRFTGPNARATYNGAILARGHSHVDFTLV 307
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H A + SR + K + + ++GKV+V RGA + ++LL+ N+ + P
Sbjct: 308 VDHAAPHCESRELVKAVLDDRAKGVFQGKVAVQRGAQKTDGKQMANALLLSNDAEFDSKP 367
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+E H AT ++ ++ +FY RGIPE A AL++ FV L + E
Sbjct: 368 ELEIFADDVVCGHGATAGQLDEDLMFYLRARGIPEAQARALLIAAFVGAALDTIDNE 424
>gi|227327028|ref|ZP_03831052.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 448
Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 101/290 (34%), Gaps = 12/290 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG---QFERTLIIADEGSYVSYLEG 246
L ++ + + + + G + L + + R + + G+ +E
Sbjct: 148 HLTESLASTSTLIRLAAGQQAEKPLYLLHISSCQEAALNTVHHRHHLNVERGASAEIIEH 207
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
+ A + + A +N+++ + + +
Sbjct: 208 Y-VSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHN--------DLVLARDA 258
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
++ G+ +T S L GE + S+ + G + D+ T + H SR
Sbjct: 259 RVRSHSFLLGAGLTRHNTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYGESRQ 318
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+ K I + + G + V A + ++LL+G T P +E
Sbjct: 319 LHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCS 378
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT ++ +E LFY RGI ++ A +I+ F EV + + E +
Sbjct: 379 HGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIESESLRDV 428
>gi|254511654|ref|ZP_05123721.1| FeS assembly protein SufD [Rhodobacteraceae bacterium KLH11]
gi|221535365|gb|EEE38353.1| FeS assembly protein SufD [Rhodobacteraceae bacterium KLH11]
Length = 426
Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats.
Identities = 75/423 (17%), Positives = 138/423 (32%), Gaps = 43/423 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + + ++ D P + +++L I
Sbjct: 30 REAALARLRQMGLP---GRRDEYWKYTRPDTLTSAEAPTAALFQTDE-PTMFHEFDRLKI 85
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
D V +EL GV + + + K+
Sbjct: 86 -------------------VFIDGVFSPEE-SDELSLEGVTIDRLEDICGKDIHWAKELY 125
Query: 178 STV----VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ AALN+A +DG +++ + +S +R + + ++
Sbjct: 126 GVLEANGQTPVQRPLAALNTAYASDGVAIHVTG--KPSKPISLIYRHASETSDAILHHVV 183
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + V+ LE A R +E+ D + + Q G + +
Sbjct: 184 RVESDAEVTILENGPAASRF-----NKCMEIDIADGGALHHIRAQ----GRDHQRRAATH 234
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
T+ G S L +T L G+ + + +G D
Sbjct: 235 MFTR----MGTESVYKSFTLTVNGVLTRNEQVIELTGDDAVAHVAGACVGDGEFHHDDTV 290
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 291 FVTHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQFLAK 350
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H +T+ I + LFY RG+P A ++ F+ E +Q++ +
Sbjct: 351 PELEIYADDVACSHGSTSGAIDETALFYLRSRGVPTREATDMLTLAFLAEAVQEIEDDAL 410
Query: 474 VEA 476
E
Sbjct: 411 AEV 413
>gi|293396325|ref|ZP_06640603.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
gi|291421114|gb|EFE94365.1| FeS assembly protein SufD [Serratia odorifera DSM 4582]
Length = 428
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 70/423 (16%), Positives = 134/423 (31%), Gaps = 48/423 (11%)
Query: 61 AYRRWL---TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
A W + P+ ++ + L E+ +
Sbjct: 31 ALAHWQQALRLGWPT---RKHENWKYTP----------------------LEGLLERQFV 65
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+I A + + + V V + +L + + A P + +
Sbjct: 66 APIVSDITAAQRDALALDIDAYRLVFVDGRYSAQLSDADLGDYQFEVASYASPQTLPE-- 123
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG-----QFERTL 232
P+ + L ++ + S + +P G L + +G R
Sbjct: 124 ----PIQPEIFLHLTESLAQETSLIRLPAGKVGVRPLYLLHISSGRGEAGEINTVHHRHH 179
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ G+ S +E + A + DNAE+++S +
Sbjct: 180 LDIARGAQASVIEHY-VSLNERAHFTGARLTANVGDNAELQHSKLAFESQPSYHFSHN-- 236
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
G +++ G+ +T S L GE S S+ + G + D+
Sbjct: 237 ------DLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGEGSNLAINSLILPIGKEVCDTR 290
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H SR + K + + + + G + V + A + +LL+GN T
Sbjct: 291 TYLEHNKGFCESRQLHKTVVSDRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGNVAEVDT 350
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H AT +I E +FY RGI A +I+ F E+ + + +
Sbjct: 351 KPQLEIYADDVKCSHGATVGRIDQEQIFYLQSRGISRHDAQQMIIFAFAAELTEGIKDDA 410
Query: 473 AVE 475
E
Sbjct: 411 IRE 413
>gi|162148828|ref|YP_001603289.1| FeS assembly protein SufD [Gluconacetobacter diazotrophicus PAl 5]
gi|161787405|emb|CAP57000.1| putative FeS assembly protein SufD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 430
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/430 (19%), Positives = 147/430 (34%), Gaps = 46/430 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A P R A + L A P D + +
Sbjct: 37 RDRAAALLRASGLP---RTGVEAWKYTSLRALADIPFAAAPARPDMSAVHAI-------V 86
Query: 118 PIREQEI-LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E+E L V VD FD+ + + + + + S
Sbjct: 87 AETEREFALDADLPRAVVVDGRFDAAL--SRLPDGVTVTRLTARDES------------- 131
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC-PMELSTYFRINEKGTGQFERTLIIA 235
P D+ ALN+ + DG +++ GV M L + + R I+
Sbjct: 132 -----PPYDDVATALNTLLADDGLVLHVGPGVDAGRMLLLSVTVADSAPLSVHPRHRIVL 186
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+G+ +S L+ LH V ++ DNA + ++ +Q P +
Sbjct: 187 DQGARLSVLD---LAVGRGAYLHNPVFDITVADNAALIHAKLQAEDPAAQH--------L 235
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G + L G+++ L E + +G Q D + +
Sbjct: 236 AVIHAEVGAGASYDSFTLTLGASLARHEVHARLAAEGGIVHVNGAQLLDGRQVADLTSVI 295
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A SR K + +G + ++GK+ V R A + + +LL+ + P
Sbjct: 296 THAAPACNSRQTVKNVLSGHARGVFQGKILVERIAQKTDGYQMNQALLLSDTAEIDAKPE 355
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT + + LFY RG+ E A A++V F+ + ++ + E
Sbjct: 356 LEIYADDVRCSHGATVGALDPDQLFYLRSRGVAEHEARAILVKAFLHDAVELIGDES--- 412
Query: 476 AQKLIDISLE 485
+ ++D ++E
Sbjct: 413 LRAVLDRAVE 422
>gi|304318027|ref|YP_003853172.1| SufBD protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302779529|gb|ADL70088.1| SufBD protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 388
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/447 (18%), Positives = 157/447 (35%), Gaps = 78/447 (17%)
Query: 34 KGLNEDIIRFI-----SAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYY 88
K L+ + I+ + S +K E R+ Y + + P W R++ + + Y
Sbjct: 3 KSLDYNTIQELIKSSGSEEK-------ELRVKGYEVFSKVPMPMWKRVKLDDV---HIPY 52
Query: 89 YAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTF 148
Y + Y+ I EQ+ L +K +D +S
Sbjct: 53 Y--------------------KEYKSAIIKNEEQDGLVTDLITKALMDDDLNS------- 85
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGV 208
++ A+ + + D+ + + A + G +
Sbjct: 86 -------------LNTALKRNFGV------------DDKFKNMVLAFYNTGFSIRALPNS 120
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
+ ++ + +N + LIIA+ S ++ + ++ +R H + ++A D
Sbjct: 121 NIKLPIAVNYAVNGDDDTIIDLNLIIAERASNMTVMFDYSSEKRG---FHNGLTVVIAKD 177
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
+ + +Q S I G + + WTQ++ GS + + L
Sbjct: 178 GSNVNIVKIQRLSDDSSNFDNNI--------IITGNDASVRWTQVDLGSRVDAYDITAEL 229
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
G S SI + Q D K+ H+A T S + KG S +RG + + R
Sbjct: 230 EGTGSSAYLNSIFLGTKNQSHDMSYKVNHIAPRTESNVDVKGALKDTSKAVFRGNLDMKR 289
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
GA ++ LL+ + IP + H A+ +I + L+Y + RG+
Sbjct: 290 GAKKAKGNESEVVLLLDKTVRSDAIPALWCSEDDVQANHSASAGQIDENKLYYMMSRGLS 349
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVE 475
+ A L+V V+ LP + E
Sbjct: 350 IDEAKLLMVEASFNPVIDTLPSDTMRE 376
>gi|114327987|ref|YP_745144.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
gi|114316161|gb|ABI62221.1| sufD protein [Granulibacter bethesdensis CGDNIH1]
Length = 441
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 78/420 (18%), Positives = 135/420 (32%), Gaps = 38/420 (9%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + P+ R A + L A + D L LG
Sbjct: 38 IRAEAAQVFDRTGLPT---QRVEAWKYTSLRPLADIRFREPLTQTDGSASRQLGDVPDLG 94
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P L + F+ +L +G+ + I
Sbjct: 95 AP-----RLVFLDGR----------------FRPDLSDAGL-LEGSRDGIDLEHFGHSSA 132
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG--QFERTLII 234
ALN+ + DG + I G+ + + G R I
Sbjct: 133 FGERTGSDGVPLVALNTMLAEDGMVLTISSGIAAGTIVLVNLASDMSGEAVDFHPRHTIR 192
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
G+ ++ +E C LH AV ++ ++A +++ QN
Sbjct: 193 LGSGASLTLVEICRGRG---TYLHNAVTQISVAEDAVLEHIRWQNEDQHAFH-------- 241
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ R + L G + L GE + + Q D +
Sbjct: 242 IATVFADVAARGRYEAFVLNMGGRVARAEFHARLDGEGGAVHVHGAQLLRDQQVGDITSI 301
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H A +SR + + AG S ++GK+ V R A + + +LL+ + T P
Sbjct: 302 VRHTAPGCSSRQAVRNVLAGRSRGVFQGKIEVTREAQKTDGYQMNAALLLSDEAEIDTKP 361
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT ++ + +FY RG+PE A A++V F+ E + + E A
Sbjct: 362 ELEIFADDVKCSHGATVGELDADQMFYLRSRGVPEVQARAILVRAFLAEAIDTVSHEGAR 421
>gi|163741050|ref|ZP_02148442.1| FeS assembly protein SufD [Phaeobacter gallaeciensis 2.10]
gi|161385403|gb|EDQ09780.1| FeS assembly protein SufD [Phaeobacter gallaeciensis 2.10]
Length = 426
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 87/437 (19%), Positives = 152/437 (34%), Gaps = 46/437 (10%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A R T+ PS D+ + Y P ++ ++ + ++
Sbjct: 26 LTEARKAALSRVQTLGLPS---------RRDEYWKYTRPDTLTAAEAP------MAAVFD 70
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
P+ + V VD VFD+ + +EL G+ I++ +
Sbjct: 71 AGEAPM----FSEFDRIKIVFVDGVFDADA-----SDELALEGISIDRIADICSKDIHWA 121
Query: 174 KKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
K AALN+A DG + + +S +R + +
Sbjct: 122 KDLYGVLEARGQTPVARPLAALNTAFAQDGVAIRVTGT--PSKPVSLIYRHASEDSDAIL 179
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
+I + G+ + LE A R +E+ D + Q G +
Sbjct: 180 HHVIRVESGATATILENGPAASRF-----NKCMEIDVADGGSLHLVRAQ----GRDHERR 230
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + G S L +T L G+ + + +G
Sbjct: 231 AATHLFAR----LGTESVFKSFTLTVNGVLTRNEAVIELTGDDAVAHIAGACVGDGDFHH 286
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 287 DDTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQ 346
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +E H +T+ I +E LFY RG+P A L+ F+ E ++++
Sbjct: 347 FLAKPELEIYADDVACSHGSTSGAIDEEGLFYLRSRGVPHGEATDLMTLAFLAEAVEEI- 405
Query: 470 MEFAVEAQKLIDISLEG 486
E A A ++D LEG
Sbjct: 406 -EDADIAANVVD-RLEG 420
>gi|255262400|ref|ZP_05341742.1| SufBD protein [Thalassiobium sp. R2A62]
gi|255104735|gb|EET47409.1| SufBD protein [Thalassiobium sp. R2A62]
Length = 429
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 150/439 (34%), Gaps = 47/439 (10%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W +E R A R M PS R + + + D P +
Sbjct: 25 AWAVEARGDALARVTKMGLPS---RRDEYWKYTEPSSLVDEAATEAALFSSDEAP-MFDQ 80
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
++L I V VD VFD+ + ++L GV +S+ +
Sbjct: 81 IDRLKI---------------VFVDGVFDADA-----SDDLAMDGVTIERLSDVMAHDIH 120
Query: 172 LVKKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
V+ + AALN+A DG ++ + +S + + +
Sbjct: 121 WVRDIYGVLETKGQDPVERPLAALNTAFADDGIVIHATG--QAARPISLIYLHRDTSSDV 178
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
++ DEG+ V+ LE A R +V E+ D + + Q G
Sbjct: 179 MLHHVVRVDEGASVTVLENGAAAARF-----NSVTEVEIADRSAFHHVRAQ----GRDHE 229
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ + + G S L +T L G+ + A+ +G
Sbjct: 230 RRAVTGLFAQ----LGTESLFKSFTLTANGVMTRNECVLELTGDDAQAHVAGAAVGDGGD 285
Query: 348 QIDS-GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ + H A N SR V K + + ++GK+ V A + + SLL+
Sbjct: 286 FLHDDTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQSLLLDG 345
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ P +E H +T+ I D+ LFY RG+P A L+ F+ E L
Sbjct: 346 DSQFLAKPELEIYADDVACSHGSTSGAIDDDALFYLQSRGVPVGQAQDLLTLAFLAEALD 405
Query: 467 KLPMEFAVEAQKLIDISLE 485
++ E +A + LE
Sbjct: 406 EIENEDLADA---LRDRLE 421
>gi|85710908|ref|ZP_01041969.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
gi|85695312|gb|EAQ33249.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
Length = 415
Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 156/441 (35%), Gaps = 47/441 (10%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
DW+ R A +K+ SW R A + L+
Sbjct: 17 DWLSPVRAEALA---KLKEQSWPGRRTEAWRYTSLH-----------------------A 50
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E L +P E A + + D V V +L + ++ + D
Sbjct: 51 VENLSLPT---ESNAQAEAPAIKGLDAIDLVFVDGRLTSDLAALNLPEGLTIRSLTDKSD 107
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+ ++ + V + + +N + T G + + + R
Sbjct: 108 IAEQVFTQ-VKPSHHLFGLVNDVLATQGIVIEVAANATIERPIRVVNFA-TDNVESHTRV 165
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+ + + + +E + N A E DNA +++ G
Sbjct: 166 LVSLGDNAKATVIEHGSGTGHSLN---TAFAEYDIADNARLEHYRFALHQGEAIHVGGSH 222
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ K S+++ T + GS +T + GE + +F + + + D
Sbjct: 223 FKLANK--------SRLNSTLIGYGSQLTRLDVDIIHAGEHAHAKFNNAYLLAPKEHFDL 274
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H N T+ ++GI + + G++ +HR A + +LL+ +
Sbjct: 275 HSTIEHAMPNGTTEENARGIIGDKAKAVFNGRIHIHRDAQKTLAELNNRNLLLSRGAQIN 334
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT ++I +E L+Y L RGI ++ A+ ++ GFV+E++ +P E
Sbjct: 335 TKPELEIYADDVQCAHGATVAEIDEEALYYLLTRGIDKQKALVMLNFGFVQEMVFDMPNE 394
Query: 472 FAVE-----AQKLIDISLEGS 487
E ++ + +E S
Sbjct: 395 ALAEWLQPILKQRFEDMMERS 415
>gi|300023862|ref|YP_003756473.1| FeS assembly protein SufD [Hyphomicrobium denitrificans ATCC 51888]
gi|299525683|gb|ADJ24152.1| FeS assembly protein SufD [Hyphomicrobium denitrificans ATCC 51888]
Length = 444
Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats.
Identities = 73/414 (17%), Positives = 139/414 (33%), Gaps = 28/414 (6%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + ++ P R + DL D + P + +++
Sbjct: 34 RRAEAIGAFGSLGLP---HRRIEEWKYTDLR----------GNLKDVLPPAI---HDETP 77
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ I E + G A F + + SG+ + + + P V
Sbjct: 78 LTIAELIVALGPLAHVDAHRIAFVNGHHRAELDDLRDASGLEVTTLGKTLSSAPTNVADA 137
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF-RINEKGTGQFERTLIIA 235
L+ + AALN+A TDG+ V + L F R R +
Sbjct: 138 LTK--SDANGAIAALNAAFMTDGAIVRVADKATLAKPLLVVFVRAGSAKQTVTVRNFVSI 195
Query: 236 DEGSYVSYLE-GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ + + +E P A+ E+ A + ++ V
Sbjct: 196 GDAATATIIEAHVVLPGSAIESQSNALTEVSVGKGATLHHAKVAVDDGKCLHLAD----- 250
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G + Q +G + + GE+ + ++ + +D+
Sbjct: 251 ---WDVVLGADATYRGFQFSSGLGLARNEINVRYAGERGKLDLSGAYMARAHEHVDTTLV 307
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H N SR + KG+ ++GK+ V A + +L++ + + P
Sbjct: 308 VDHAVPNCESRELFKGVLDDHGRGVFQGKIIVRPDAQKTDGKQMAQALMLSEDAEFDSKP 367
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H T++++ + LFYC RGIPE A AL++ F+ E + K+
Sbjct: 368 ELEIFADDVVCGHGTTSAELDPDLLFYCRSRGIPEAEARALMIESFIGEAIDKV 421
>gi|261822004|ref|YP_003260110.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
wasabiae WPP163]
gi|261606017|gb|ACX88503.1| FeS assembly protein SufD [Pectobacterium wasabiae WPP163]
Length = 448
Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 102/290 (35%), Gaps = 12/290 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG---QFERTLIIADEGSYVSYLEG 246
L ++ + + + + G + L + + R + + G+ +E
Sbjct: 148 HLTESLASTSTLIRLAAGQQAEKPLYLLHISSSQTAALNTVHHRHHLNVERGASAEIIEH 207
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
+ A + + A +N+++ + + +
Sbjct: 208 Y-VSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAAGYHFAHN--------DLVLARDA 258
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
++ G+ +T + S L GE + S+ + G + D+ T + H SR
Sbjct: 259 RVRSHSFLLGAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGYGESRQ 318
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+ K I + + G + V A + ++LL+G T P +E
Sbjct: 319 LHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCS 378
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT ++ +E LFY RGI ++ A +I+ F EV + + E +
Sbjct: 379 HGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDV 428
>gi|300172558|ref|YP_003771723.1| FeS assembly protein SufD [Leuconostoc gasicomitatum LMG 18811]
gi|299886936|emb|CBL90904.1| FeS assembly protein SufD [Leuconostoc gasicomitatum LMG 18811]
Length = 394
Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats.
Identities = 82/423 (19%), Positives = 154/423 (36%), Gaps = 43/423 (10%)
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
++ P +A++RY LD++ P T + + ++
Sbjct: 9 SLPLPEFAKVRYSGW------------------QLDELTPATENTKTTYFL----KNTIS 46
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G++ S + E + GVI M + +A + LV K + +V+ +
Sbjct: 47 GIEVSG--------QSTTYQHLSENMIAQGVIVMGMKQAQMVYGPLVNKLIGSVISKRAD 98
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIADEGSYVSYLE 245
+A N F G FVYIP V+ L + G R + + V+ L+
Sbjct: 99 RLSAQNYEQFNTGIFVYIPDQVKFDDVLHLALNHLAMSGQDFVARIFVCVGAHAKVTILQ 158
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
E + V+E++A A++ Y+ + + R
Sbjct: 159 EMHTIG-SEKTKASVVIEVLANVGAQVTYANIDSLGEQ--------TTAFINREVLVKDH 209
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + W E + L GE + I ++ Q T +L+ ++T
Sbjct: 210 ATVDWQNAEFNDGNVVMRVASQLNGEGATSHANVIGLTIKKQTQGLVTTVLNKGRHTVGH 269
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
I +G+ S + G + +GA S + L++ P + +
Sbjct: 270 IFQRGVILNRSTLVFNGIGQIIKGAKGSDAQQESRVLMLSRRARGDANPLLLIDENDVTA 329
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
H A+ ++ DE ++Y + RGI E A L++ GF+ EVL K+P AQ+ + +E
Sbjct: 330 GHAASVGRVDDEQMYYLMSRGISERVARKLVIRGFMGEVLMKMP---TRAAQQKVMSEIE 386
Query: 486 GSV 488
+
Sbjct: 387 RKL 389
>gi|149376034|ref|ZP_01893800.1| FeS assembly protein SufD [Marinobacter algicola DG893]
gi|149359671|gb|EDM48129.1| FeS assembly protein SufD [Marinobacter algicola DG893]
Length = 428
Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats.
Identities = 77/433 (17%), Positives = 145/433 (33%), Gaps = 41/433 (9%)
Query: 51 PDWMLEWRLL---AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPE 107
P+ +LE R A + M P+ + + + + L P
Sbjct: 20 PEPLLELRKQRGTAL---VDMPLPT---RKTENWKYS-------SRHLKLTDELATTLPA 66
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ L IP GV + + D G+ ++
Sbjct: 67 TGKDGYSLSIPGYRVVFHNGVMIPEASDFPDLD---------------GIRIQRFADLDD 111
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF-RINEKGTG 226
+ + + L + A LNSA F DG ++ + K L
Sbjct: 112 DEAAALAERLDNTLDTRAVQMARLNSARFEDGLYIQLDKEAVLDQPLFIVHEVTGTASGS 171
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ R + A S ++ +E + + + V E V D A++ +
Sbjct: 172 AYPRIYVDAARHSQITVVEEYLSSGEEPVMV-DTVTEFVLADGAQVTNVRLVMEGENVQH 230
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
G + S+ + G + L GE + + ++ G
Sbjct: 231 IGAT--------GVRQAANSRFESHCVGFGGPLRRHDLQVRLEGEGGECKLNGVVVTQGK 282
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q D+ T + H+A + S + I+A S+ + G++ +H A S +LL+
Sbjct: 283 QHYDNHTSIEHVAAHCDSEETYRNIAADESHAVFNGRIHIHEDAQKSNANMNNKNLLLST 342
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H AT ++ LFY + RGI A L+ F+ E+++
Sbjct: 343 GAEIDTKPELEIYADDVKCAHGATIGQLDRISLFYLVSRGIGRREANTLLTMAFINELVE 402
Query: 467 KLPMEFAVEAQKL 479
++P++ +A +L
Sbjct: 403 QIPVQAVKDAAQL 415
>gi|323169252|gb|EFZ54928.1| sufB domain protein [Shigella sonnei 53G]
Length = 278
Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 112/241 (46%), Positives = 153/241 (63%), Gaps = 23/241 (9%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I +HP+LV+KYL TVVP DNF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN +
Sbjct: 173 IHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKP 232
Query: 226 G 226
G
Sbjct: 233 G 233
>gi|159044175|ref|YP_001532969.1| sufD [Dinoroseobacter shibae DFL 12]
gi|157911935|gb|ABV93368.1| sufD [Dinoroseobacter shibae DFL 12]
Length = 427
Score = 210 bits (535), Expect = 4e-52, Method: Composition-based stats.
Identities = 84/412 (20%), Positives = 136/412 (33%), Gaps = 43/412 (10%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W E R A R M P R + + P L D P +
Sbjct: 26 WASEARAAALSRVQNMGLP---GRRDEYWKYTN------------PTRLTDAAPTPAALF 70
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
E P+ + V VD VFD + ++L V+ ++EA
Sbjct: 71 EPNETPV----FGTMDRIKIVFVDGVFD-----ESASDDLSGDNVVIERLAEAQLADIHW 121
Query: 173 VKKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
K+ AALN+A +DG ++ +S + ++ +
Sbjct: 122 AKEVYGVLETRGQTPVARPLAALNTAFASDGVLIHATGP--VSKPVSLIYLHKDEASDAI 179
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
I + G+ ++ LE A R +E+ D E + Q G +
Sbjct: 180 LHHAIKVETGASLTVLENGPAAARF-----NKCMEIEIADGGEFHHVRTQ----GRDHER 230
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ T+ G S + +T + G+ + +G
Sbjct: 231 QAATHMFTR----LGAESVFKSFTMTANGVLTRNEVIIEMTGDNGVAHVAGCCVGDGDFH 286
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D + H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 287 HDDTVFVTHDALNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDS 346
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
P +E H +T+ I +E LFY RGIPE A L+V F
Sbjct: 347 QFLAKPELEIYADDVACSHGSTSGAIDEEGLFYLRSRGIPEGLATDLMVLAF 398
>gi|83942225|ref|ZP_00954686.1| FeS assembly protein SufD [Sulfitobacter sp. EE-36]
gi|83846318|gb|EAP84194.1| FeS assembly protein SufD [Sulfitobacter sp. EE-36]
Length = 427
Score = 210 bits (535), Expect = 4e-52, Method: Composition-based stats.
Identities = 83/433 (19%), Positives = 146/433 (33%), Gaps = 44/433 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R P D+ + Y P ++ PQ++ I
Sbjct: 30 RKDALSRLQQAGLPE---------RRDEYWKYTRPDTLTQPQAISAAVRASEDVALFDQI 80
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP---DLVK 174
+ V VD VFD+ + ++L G+ +++A + DL
Sbjct: 81 D----------RLKLVFVDGVFDADA-----SDDLALEGITIERLAQADADLHWARDLYG 125
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
AALN+A DG +++ + ++ +R + ++
Sbjct: 126 TLEKNGQTPVARPLAALNTAFAADGVLIHVTD--KVSKPVNIVYRRTSETADVMLHHVVK 183
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
D G+ + LE R V+E+ DNA + Q G + +
Sbjct: 184 LDAGAEFTLLENGPVAARF-----NGVLEVEVADNASFHHVRAQ----GRDHEQRAATHI 234
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-FQQIDSGT 353
T+ G S L +T L G+ + + +G D
Sbjct: 235 FTR----LGTESAFKSFTLTANGVMTRNDCVIELTGDDAAAHVAGACVGDGADFHHDDTV 290
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V A + + SLL+ +
Sbjct: 291 FITHDAVNCESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQSLLLDEDSQFLAK 350
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-F 472
P +E H +T+ I ++ LFY RG+P A L+ F+ E ++++ E
Sbjct: 351 PELEIYADDVACSHGSTSGAIDEDALFYLRSRGVPHNVATDLLTLSFLAEAVEEIEDETL 410
Query: 473 AVEAQKLIDISLE 485
E + LE
Sbjct: 411 REEITARLAAWLE 423
>gi|303244340|ref|ZP_07330676.1| SufBD protein [Methanothermococcus okinawensis IH1]
gi|302485235|gb|EFL48163.1| SufBD protein [Methanothermococcus okinawensis IH1]
Length = 406
Score = 210 bits (535), Expect = 4e-52, Method: Composition-based stats.
Identities = 94/408 (23%), Positives = 186/408 (45%), Gaps = 28/408 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
I+ ++ Y K + SL ++D E E +GI I E+ S
Sbjct: 26 EDINLEE---YKIEKDGISIDSLTELDQEYKSELENIGIDIEEK--------SSAGSYLQ 74
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
++ +V + + MPISEA+ ++ + Y +V + D + A + T+
Sbjct: 75 INNKAVYSKTYS-----NIEMMPISEALKKYD--LDDYFWNLVEIKDKYTARVAL-ELTE 126
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G F+ +PKGV+ + L T I E+ + Q +II +EG+ ++ + GC ++ LH
Sbjct: 127 GFFIRVPKGVKETIPLQTCLLIGEESSSQNVHNIIIVEEGAELNVITGCATSPHVKSGLH 186
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
V E +A++ Y+ + +W ++ I+ + +
Sbjct: 187 IGVSEFYVKKDAKLTYTMIHDWGE-------NVHVRPRTGVYVEENGIFINNYVVLSKVK 239
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP+ G+ S F ++A G ++D GT+ + K +++ ++S+ I +
Sbjct: 240 SIQSYPTVYCAGDNSKATFQTVAYGKGNSKMDMGTRAILSGKGSSADMISRTIVVDNAEI 299
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
RG + + + +C L++ +N H +P +E+K ++ +L HEA KI++
Sbjct: 300 IARG--HLVGESEDVKGHLECRGLILSDNAHLHAVPELEAKKTNLDLSHEAAVGKIAENQ 357
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
L Y + RG+ E+ A +LI+ GF+ + LP + A ++++D++L+G
Sbjct: 358 LMYLMSRGLTEDEATSLIIKGFLSVDISGLPPKLAKSVEQIMDMTLDG 405
>gi|282861992|ref|ZP_06271055.1| FeS assembly protein SufD [Streptomyces sp. ACTE]
gi|282563017|gb|EFB68556.1| FeS assembly protein SufD [Streptomyces sp. ACTE]
Length = 393
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 63/307 (20%), Positives = 117/307 (38%), Gaps = 20/307 (6%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA A F SFV + K + ++ +G + +I + +
Sbjct: 103 DRVAAQAYASFEQASFVTVAKEAVLTEPIRI--AVHGEGGVAYGHQVIELGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + A V+ V D A++ +VQ+W V + G
Sbjct: 160 ----IDHTGDTVLATNVDYVLGDGAKLTVVSVQDWDEKAVH--------VAQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + P G E + + ++ Q + + H + S
Sbjct: 208 ASFKSVVVTFGGDLVRLNPRVAYAGPGGEAELFGLYFTDKGQHQEHRLLVDHNTPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+ KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 VAYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL--ID 481
H + T + DE LFY RGIPEE A L+V GF E++Q++ + VEA+ L I+
Sbjct: 328 GAGHASATGRFDDEQLFYLQSRGIPEEEARRLVVRGFFAELVQQIGLP-DVEARLLDKIE 386
Query: 482 ISLEGSV 488
L+ SV
Sbjct: 387 AELKASV 393
>gi|86750108|ref|YP_486604.1| FeS assembly protein SufD [Rhodopseudomonas palustris HaA2]
gi|86573136|gb|ABD07693.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris HaA2]
Length = 437
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 69/413 (16%), Positives = 138/413 (33%), Gaps = 31/413 (7%)
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+ + P R + DL V P + I + +
Sbjct: 42 FQRIGLP---HRRIEDWKYTDLRALMREVLPVAPAPDAAALARAEAAVKLHAIDGVRRLV 98
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVG 184
L D V + ++G+ + +A+ D +
Sbjct: 99 LV-------------DGALVPSLSDLTALEAGLSIRSLRDALDAGDDRLLSL------DN 139
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLIIADEGSYVSY 243
N ALN+A+ TDG + + G + L + F R+LI + +
Sbjct: 140 ANPMTALNTALMTDGVVIEVADGAKPARPLHILHIASGGAPAAMFTRSLISIGNNAAATV 199
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+E A + + D A + + + + G
Sbjct: 200 VESYVASEGAGVYQVHDAAVIAIGDGARLDHVRLIEDSREAFS--------IAAAEVRVG 251
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + + TG+ ++ + + GE + E + + NG Q D+ M H +
Sbjct: 252 AHAHYNVVGIATGALVSRYSSTVTIAGEHAQVETNGVNLLNGKQHADTTLVMNHDVPHCV 311
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SR + ++ ++ ++G+++V + A + +LL+ + A P +E
Sbjct: 312 SREGFRAVADDRGHSVFQGRINVRQPAQQTDAKMMTRALLLSDEAEADNKPELEIFADDV 371
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H A + D+ LFY RG+ E+ A AL++ FV E ++ + + E
Sbjct: 372 TCGHGAAIGALDDQLLFYLRARGLAEKEAEALLIQAFVGEAIEAIADDNLREL 424
>gi|254428157|ref|ZP_05041864.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
gi|196194326|gb|EDX89285.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
Length = 409
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 62/309 (20%), Positives = 111/309 (35%), Gaps = 13/309 (4%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIAD 236
+ +A NSAV + + + R + ++ R +++ +
Sbjct: 101 GPAINGLQTPFAFYNSAVASQPVVLTVAANTRIEQPIHVQIQSASDAPAHCNPRLVVVLN 160
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+ + +E AV LV DNA++ + +Q I
Sbjct: 161 QGAEAAVIEHYHGQGEAL---TNAVTALVTADNAQLTHYRLQGEQASSLHIGTLI----- 212
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ SK+ QL TG+ + L+ + I + +D+ +
Sbjct: 213 ---IDQQGISKVDSYQLMTGNRLRRNDVRALVSKSGAELNMKGIFVVRDKTHVDNQLCVE 269
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N S KG++ + G++ +H GA+ + +LL+ +T P +
Sbjct: 270 HSVPNCESDQNFKGLAGENGKAVFNGRIHIHPGASGTNAELSNKNLLLNPGAEINTKPEL 329
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
E N H T ++ FY RGIP A ++ GFV E+L LP E E
Sbjct: 330 EIYNDDVKCAHGTTVGQLDAMQQFYLQSRGIPAAEAKRMLSLGFVNELLMTLPHEKVAEW 389
Query: 476 AQKLIDISL 484
A ++ L
Sbjct: 390 ATPWLEAEL 398
>gi|226330346|ref|ZP_03805864.1| hypothetical protein PROPEN_04263 [Proteus penneri ATCC 35198]
gi|225201141|gb|EEG83495.1| hypothetical protein PROPEN_04263 [Proteus penneri ATCC 35198]
Length = 435
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 53/290 (18%), Positives = 104/290 (35%), Gaps = 12/290 (4%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTLIIADEG 238
V + L ++ + + GV L + + R +
Sbjct: 134 VNGEIFLHLVESLAPHPLLITLKNGVIADKPLYILNITQGESGAEVNNANYRFHLDVGAN 193
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + +E + A + DNA + + + G+
Sbjct: 194 TQMQVIEHYISSDNKNRHFTGARLTAAIGDNASFNHIKL--------GFENGVSQHFAHN 245
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G ++++ G+ ++ + S L+GE + S+ + + D+ T ++H
Sbjct: 246 DLTIGRDARVNSYAFLLGAKLSRHHTSSALKGENTVLSMNSVVLPKAGEIADTRTWLVHG 305
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
KN SR + K I+ + G ++V A + ++LL+G+ T P +E
Sbjct: 306 EKNCQSRQLHKSIAMDAGKAVFNGMITVTPQALKTDGQMTNNNLLLGDKAQIDTKPQLEI 365
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I DE LFY RGI A +I++ F E+ + +
Sbjct: 366 YADDVKCSHGATVGRIDDEQLFYLRSRGISLTDARKMIIHAFAAELTESI 415
>gi|242279276|ref|YP_002991405.1| SufBD protein [Desulfovibrio salexigens DSM 2638]
gi|242122170|gb|ACS79866.1| SufBD protein [Desulfovibrio salexigens DSM 2638]
Length = 386
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 88/403 (21%), Positives = 157/403 (38%), Gaps = 26/403 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
ID +D D ++ ++ + +EQ I+AGV V A
Sbjct: 2 KKIDLNDFK-------------FDGLEHAVIEDLSSIETEEKEQLIMAGVDVDAKDVSAT 48
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
F + V M I +A+ E D + Y ++ + + +
Sbjct: 49 FMQ-VDHSNVHCGSNDKDVEVMDIKKAL-EKYDGLPDYFFKLIDKDKDEFTRNAADNLHG 106
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G FV KG + + + + + +GQ +++ +E S + + GC A + H
Sbjct: 107 GYFVRTKKGAKIEKPVQSCLFLKAENSGQNIHNIVVVEEDSELHIITGCAAAHDKFSGGH 166
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ E ++ ++ V NW + G S I+ L
Sbjct: 167 FGLSEFYVKKGGKLTFTMVHNWGENTVVRPRTV-------GVVEEGGSLINNYVLMKRVK 219
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP+ L GE + F S+ ++ ID+GT+++ A NT + +S+ I+ G +
Sbjct: 220 DLQSYPTIFLNGEGAVARFNSVLVAPEGSHIDTGTRIIQNAPNTKAETISRTITTGGTII 279
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+ RG + +R +C L++G H +P +E L HEA KI+ E
Sbjct: 280 S-RG--HIQGNHVPARGHIECQGLILG-GGRIHAVPELEGTVEGVELSHEAAVGKIAQEE 335
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ Y + RG+ E+ A + IV GF+ + LP + E K I+
Sbjct: 336 IEYLMARGMDEDEATSTIVRGFLNVDIMGLPAKLQKEIDKQIE 378
>gi|260597666|ref|YP_003210237.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
turicensis z3032]
gi|260216843|emb|CBA30354.1| Protein sufD [Cronobacter turicensis z3032]
Length = 438
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 134/412 (32%), Gaps = 41/412 (9%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
++ L + P+ + D L + + AP + + + + I
Sbjct: 47 LQQLLRLGLPTRKHEDWKYTPLDGLLKHDFVAPAAAALSREELSALALPVDALRLVFIDG 106
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
R L+ + +V DS S G+ EA + + + ++
Sbjct: 107 RFAPDLSDATENSGFEISVNDSRS------------GLPAPVQPEAFLHLTESLAQSVTH 154
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+ + P M +S +E T + L DEG+
Sbjct: 155 I-----------------RVARNQQPSKALLLMHISAGRAGDEINTVHYRHHL-DLDEGA 196
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ +E + + A + + NA++ + + P
Sbjct: 197 QATVIEHY-VSRDAQPHFTGARLTMQVGANAQLNHYKLAFENPVSWHFAHN--------D 247
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + + G+ + S L GE S+A+ + D+ T + H
Sbjct: 248 LVVSQDAHAASSSYLLGAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCDTRTWLEHNT 307
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
SR + K I + G + V + A + ++LL+G T P +E
Sbjct: 308 GYCNSRQLHKTIVRDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIY 367
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI E+AA +I+ F E+ + + E
Sbjct: 368 ADDVKCSHGATVGRIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDE 419
>gi|83955460|ref|ZP_00964091.1| FeS assembly protein SufD [Sulfitobacter sp. NAS-14.1]
gi|83840104|gb|EAP79279.1| FeS assembly protein SufD [Sulfitobacter sp. NAS-14.1]
Length = 427
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 83/433 (19%), Positives = 146/433 (33%), Gaps = 44/433 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R P D+ + Y P ++ PQ++ I
Sbjct: 30 RKDALSRLQQAGLPE---------RRDEYWKYTRPDTLTQPQAVSAAVHASEDVALFDQI 80
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP---DLVK 174
+ V VD VFD+ + ++L G+ +++A + DL
Sbjct: 81 D----------RLKLVFVDGVFDADA-----SDDLALEGITIERLAQADADLHWARDLYG 125
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
AALN+A DG +++ + ++ +R + ++
Sbjct: 126 TLEKNGQTPVARPLAALNTAFAADGVLIHVTG--KISKPVNIVYRRTSETADVMLHHVVK 183
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
D G+ + LE R V+E+ DNA + Q G + +
Sbjct: 184 LDAGAEFTLLENGPVAARF-----NGVLEVEVADNASFHHVRAQ----GRDHEQRAATHI 234
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-FQQIDSGT 353
T+ G S L +T L G+ + + +G D
Sbjct: 235 FTR----LGTESAFKSFTLTANGVMTRNDCVIELTGDDAAAHVAGACVGDGGDFHHDDTV 290
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N SR V K + + ++GK+ V A + + SLL+ +
Sbjct: 291 FITHDAVNCESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQSLLLDEDSQFLAK 350
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-F 472
P +E H +T+ I ++ LFY RG+P A L+ F+ E ++++ E
Sbjct: 351 PELEIYADDVACSHGSTSGAIDEDALFYLRSRGVPHNVATDLLTLSFLAEAVEEIEDETL 410
Query: 473 AVEAQKLIDISLE 485
E + LE
Sbjct: 411 REEITARLAAWLE 423
>gi|260428604|ref|ZP_05782583.1| SufBD [Citreicella sp. SE45]
gi|260423096|gb|EEX16347.1| SufBD [Citreicella sp. SE45]
Length = 425
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 84/420 (20%), Positives = 144/420 (34%), Gaps = 41/420 (9%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + A ++ D P + ++L I
Sbjct: 30 RQSALARLQAMGLP---GARDEYWKYTRPDTLVAAEAPTAAVFQGDE-PLVFDGVDRLKI 85
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH--PDLVKK 175
V D VFD+ + + L + +++A H DL K
Sbjct: 86 ---------------VFRDGVFDAEA-----SDPLALENIEIARLADAADIHWAQDLYGK 125
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
+ AALN+A TDG + + + ++ + + + ++
Sbjct: 126 LEEDGQTPVERPLAALNTAFATDGILMRVTG--KVSKPVALIYYHESETSDAILHHVVKV 183
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+EG V+ LE A R V+E+ D A + Q G + +
Sbjct: 184 EEGGDVTVLENGPAAARF-----NKVMEVDVADGAGFHHIRAQ----GRDHERRAATHIF 234
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ G S L +T L G+ + + +G D +
Sbjct: 235 AR----LGTESTFKTFTLTVNGVLTRNECVVELTGDDAVCHIAGACMGDGDFHHDDTVFV 290
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A N SR V K + + ++GK+ V +GA + + SLL+ + P
Sbjct: 291 THDAVNCESRQVFKKVLRNGATGVFQGKILVKQGAQKTDGYQISQSLLLDEDSQFLAKPE 350
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H +T+ I ++ LFY RG+P A L+ F+ E +Q++ E E
Sbjct: 351 LEIYADDVACSHGSTSGAIDEDGLFYLRARGLPRGIAEDLLTIAFIAEAVQEIEDESLQE 410
>gi|50120792|ref|YP_049959.1| cysteine desulfurase activator complex subunit SufD [Pectobacterium
atrosepticum SCRI1043]
gi|49611318|emb|CAG74765.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 439
Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats.
Identities = 50/290 (17%), Positives = 103/290 (35%), Gaps = 12/290 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG---QFERTLIIADEGSYVSYLEG 246
L ++ + + + + G + L + + R + + + +E
Sbjct: 139 HLTESLASTSTLIRLAAGQQAEKPLYLLHISSSQAAALNTVHHRHHLNVERSASAEIIEH 198
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
+ A + + A +N+++ + + +
Sbjct: 199 Y-VSLDEHAHFTGARLTVNAAENSQVSHYKLAFEAAASYHFAHN--------DLVLARDA 249
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
++ G+ +T + S L GE + S+ + G + D+ T + H N SR
Sbjct: 250 RVRSHSFLLGAGLTRHHTSAQLNGEGTNLSMNSLILPVGSEVCDTRTYLEHNQGNGESRQ 309
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+ K I + + G + V A + ++LL+G T P +E
Sbjct: 310 LHKVIVNDRARAVFNGMIKVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCS 369
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT ++ +E LFY RGI ++ A +I+ F EV + + E +A
Sbjct: 370 HGATIGRMDEEQLFYLRSRGITQQDAQQMIIFAFAAEVTEAIENESLRDA 419
>gi|163736415|ref|ZP_02143834.1| SufBD [Phaeobacter gallaeciensis BS107]
gi|161390285|gb|EDQ14635.1| SufBD [Phaeobacter gallaeciensis BS107]
Length = 426
Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 147/437 (33%), Gaps = 46/437 (10%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A R T+ P R + P +L + ++
Sbjct: 26 LTEARKAALSRVQTLGLP---GRRDEYWKYT------------RPDTLTAAEASTAAVFD 70
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
P+ + V VD VFD+ + +EL G+ I++ +
Sbjct: 71 AGEAPM----FSEFDRIKIVFVDGVFDADA-----SDELALEGISIDRIADICAKDIHWA 121
Query: 174 KKYLS----TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
K AALN+A DG + + +S +R + +
Sbjct: 122 KDLYGVLEARGQTPVARPLAALNTAFAQDGVAIRVTGT--PSKPVSLIYRHASEDSDAIL 179
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
+I + G+ + LE A R +E+ D + Q G +
Sbjct: 180 HHVIRVESGATATILENGPAASRF-----NKCMEIDVADGGSLHLVRAQ----GRDHERR 230
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + G S L +T L G+ + + +G
Sbjct: 231 AATHLFAR----LGTESVFKSFTLTVNGVLTRNEAVIELTGDDAVAHIAGACVGDGDFHH 286
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + H A N SR V K + + ++GK+ V GA + + SLL+ +
Sbjct: 287 DDTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDEDSQ 346
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +E H +T+ I +E LFY RG+P A L+ F+ E ++++
Sbjct: 347 FLAKPELEIYADDVACSHGSTSGAIDEEGLFYLRSRGVPHGEATDLMTLAFLAEAVEEI- 405
Query: 470 MEFAVEAQKLIDISLEG 486
E A A ++D LEG
Sbjct: 406 -EDADIAANVVD-RLEG 420
>gi|170017846|ref|YP_001728765.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
gi|169804703|gb|ACA83321.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leuconostoc citreum KM20]
Length = 388
Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats.
Identities = 72/422 (17%), Positives = 150/422 (35%), Gaps = 42/422 (9%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
++ P + +++Y D + S + + EL
Sbjct: 4 ESLPLPEFTKVKYRTWQLDQMNP-----SQAQSATSHFLTDEL----------------- 41
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
G++ S A + + L GV+ I+ A +P + K L V+
Sbjct: 42 -GIEVSGTATSYYY--------LPKYLVAQGVLLTNINTAQSRYPQQLDKLLGQVIANNT 92
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIADEGSYVSYL 244
+ A N+ F G +Y+P + +++ G R L+ S V+ L
Sbjct: 93 DRLTAQNAQKFNTGILLYVPDHTVIKDVIHLNLNQLSVGGNDYIARVLVYVGRQSSVTIL 152
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ + + VVE++A A + Y+ + G ++ R
Sbjct: 153 QSAHTIG-SDTTKASLVVEVIADVGASVHYANL-------DAFSGKTTAYIH-READIRD 203
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W+ + L GE + +A+++ Q T M++ +++
Sbjct: 204 HATLDWSNVAFNDGQVVTKLVSHLNGEGAVSHANIMAMTHHKQTQGFMTNMVNRGRHSLG 263
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I +G+ S + G + +GA S + L++ P + +
Sbjct: 264 HIYQRGVILNHSTLVFNGIGQIIKGAKGSDAQQESRVLMLSRRARGDANPLLLIDENDVT 323
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA-QKLIDIS 483
H A+ ++ + ++Y + RG+ E+ A L++ GF+ VL ++P A +A I
Sbjct: 324 AGHAASVGRVDENQMYYLMSRGLSEKLARELVIRGFMGNVLAEIPTNRAQQAVINAIAEK 383
Query: 484 LE 485
L+
Sbjct: 384 LK 385
>gi|20093194|ref|NP_619269.1| hypothetical protein MA4407 [Methanosarcina acetivorans C2A]
gi|19918541|gb|AAM07749.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 407
Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats.
Identities = 87/399 (21%), Positives = 167/399 (41%), Gaps = 23/399 (5%)
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
DF+ + K + L +D E +T ++GI E+ + V D+
Sbjct: 25 DFELEKFEEGSKVSKPIEDLQTLDEESKKTLLQVGIIPSEE--------GRSGSFIVLDN 76
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
++ K+E V M +A+ E + +K Y +V V + Y A DG F
Sbjct: 77 AVSHSSLKDE----NVELMSTHKAL-EKYEWLKDYSWKLVQVDADKYTAKTYLEDADGYF 131
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ P G + M + T + K Q +I+ +E + + + GCT + E LH +
Sbjct: 132 IRAPPGKKSSMPVQTCLMLGSKKAAQTVHNIIVVEEEASLDIITGCTTKKGVEEGLHLGI 191
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
E+ A + ++ + NW + + + IS
Sbjct: 192 SEMYVKKGATLNFTMIHNWAEQIGVRPRTVVH-------VEEGGTYISNYICLKPVHSVQ 244
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YP+ L G+ + +IAI + ++D G++ + A +T + ++S+ I+ G R
Sbjct: 245 TYPTVRLEGKGAVTRLNTIAIGHPGSELDLGSRAVFNAPDTRAELISRTITIGG-RLVAR 303
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G++ A ++ +C L++ + IP +E+ L HEA KI+ + + Y
Sbjct: 304 GEMI--GNAKGAKGHLECKGLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVEY 361
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ RG+ E+ A+ +I+ GF+ ++ +P E E ++ I
Sbjct: 362 LMARGLTEDEAVGMIIRGFLDVGIRGIPEELKKEIEETI 400
>gi|295395288|ref|ZP_06805492.1| FeS assembly protein SufD [Brevibacterium mcbrellneri ATCC 49030]
gi|294971839|gb|EFG47710.1| FeS assembly protein SufD [Brevibacterium mcbrellneri ATCC 49030]
Length = 379
Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats.
Identities = 58/311 (18%), Positives = 117/311 (37%), Gaps = 16/311 (5%)
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
VP ++ A + + + + I +GV T++ +
Sbjct: 81 VPSPEDLPAVIAANRASSVTRYDIGEGVELESPAFITTEGASNENPVHNHTVVTVGAHAS 140
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+ + + + + ++ ++ A +K T+Q W +
Sbjct: 141 ATIV-----IKHTGHAQLSELLSVIVGPGARVKLVTLQLWDDEAVHLG--------QHDA 187
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
G ++ + + G I + G + + ++ Q ++ T + H
Sbjct: 188 VVGKDAQFTHIAITLGGKIVRLNSNVSYDGPGGEAQMLGLYFADAGQHLEHRTYVDHNTP 247
Query: 361 NTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
N TS ++ KG G + + G V + A + +L++ A ++P +E +
Sbjct: 248 NATSDVLYKGALQGKDARSVWIGDVLIRPEANGIDTYELNRNLVLTEGARADSVPNLEIE 307
Query: 420 NSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQ 477
H ++T + +EHLFY + RGI E+ A L+V GF EV+QK+ +E E
Sbjct: 308 TGEIEGAGHASSTGRFDEEHLFYLMSRGIDEKTARRLVVRGFFNEVIQKIDIEQIEEVLT 367
Query: 478 KLIDISLEGSV 488
+ I+ L SV
Sbjct: 368 EQIEEELSRSV 378
>gi|227503595|ref|ZP_03933644.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49725]
gi|227075631|gb|EEI13594.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49725]
Length = 384
Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats.
Identities = 65/324 (20%), Positives = 114/324 (35%), Gaps = 20/324 (6%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E D + L V D A ++ +G V + V+ ++ F +
Sbjct: 71 ETVDRDDERLGRVGKPSDRVAAQAWTS-MPEGQVVTVDPEVQVEDPITITFTGKGEDVTS 129
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F T I + + + + + HA VE + D A + +W
Sbjct: 130 FGATSIEVGHHAEATVV-----LKYVGSGTHADNVEFILGDGAHLTVIVDVDWENDAVHL 184
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ G + + G + P E + ++ Q
Sbjct: 185 SNQV--------AQVGRDAVLRHNSAIFGGEVVRIVPRVNFTAPGGDAELLGVYFADSGQ 236
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR----GKVSVHRGAAHSRNFTQCDSLL 403
++ + H N S ++ KG G N R G V + A + + ++L+
Sbjct: 237 YFENRMLVDHSVPNCRSNVLYKGALQGEKKNEARTCWVGDVLIRSNAQGTDTYETNNNLI 296
Query: 404 IGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ + A IP +E + H AT + D LFY + RGIPE A LI+ GF
Sbjct: 297 LTDGARADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFN 356
Query: 463 EVLQKLPME-FAVEAQKLIDISLE 485
EV+ ++P++ + E + I LE
Sbjct: 357 EVIHRIPVQSLSEELENRISEELE 380
>gi|21232199|ref|NP_638116.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767672|ref|YP_242434.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990789|ref|YP_001902799.1| ABC transporter-like protein involved in Fe-S cluster assembly
[Xanthomonas campestris pv. campestris str. B100]
gi|21113955|gb|AAM42040.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573004|gb|AAY48414.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
gi|167732549|emb|CAP50743.1| ABC transporter-like protein involved in Fe-S cluster assembly
[Xanthomonas campestris pv. campestris]
Length = 420
Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats.
Identities = 79/433 (18%), Positives = 154/433 (35%), Gaps = 38/433 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R L P A + L P + P L+ I
Sbjct: 18 RRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPALIDAAVLDEI 69
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P + G + ++ + +GV +S A+ + ++ L
Sbjct: 70 PTPRLVFVNGRASDALSDLSEL--------------PAGVQVQTLSSALV-GDESAQQLL 114
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLIIA 235
D +A LN+A+ +G+ V + GV+ + L F R LI
Sbjct: 115 GRRFERSDEIFARLNAALADEGALVRVDAGVKVALPLQLVFVSVGGEHDLAWHHRHLIEL 174
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+ + +E D L +V+ + +A + ++ VQ
Sbjct: 175 RADAALGVVEHHL-HVGDAAHLDNSVMHVHLAQDAVLSHARVQADSARA--------TAF 225
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ ++ LE G+ ++ + L G+ + + + NG + +D+ +
Sbjct: 226 ARTDAVLARNAQYQRVDLELGAGLSRHELNARLEGDNARLTANGVLLGNGRRHVDTRLGI 285
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+A++T +V +G+ A S + G + + +GA + +LL+ +N T P
Sbjct: 286 EHIARDTACELVWRGVGADRSRVVFHGGIHIRQGADGTDARLSNKNLLLSDNAEIDTQPV 345
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ H AT ++ D LFY RG+P++ A L+ F E L+ LP
Sbjct: 346 LVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQQQAQRLLSAAFCHEPLRALPSP---- 401
Query: 476 AQKLIDISLEGSV 488
+ L+ + L+ ++
Sbjct: 402 LRDLLAVQLDRAL 414
>gi|311898929|dbj|BAJ31337.1| putative FeS assembly protein SufD [Kitasatospora setae KM-6054]
Length = 410
Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats.
Identities = 68/389 (17%), Positives = 138/389 (35%), Gaps = 23/389 (5%)
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
D + +++ P+ T + + D + E+ + G+
Sbjct: 41 DARVAVKPSFDVNDFPVPTGREEDWRFTPLHRLGGLHDGTAADAAKGEDKIELGLPEGVT 100
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
SE + V + + V + AA + F V +PK + +
Sbjct: 101 SELVGRDDARVGRAGTPV-----DRVAAQAFSAFEQALVVTVPKETVLTEPVRIDV--HG 153
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
+G F ++ + + T AA V+L+ D A++ + +VQ+W
Sbjct: 154 EGGTAFAHLVVEVKPFAEAVVVLNHTGTGTR-----AANVDLLVGDGAKLTFVSVQDWER 208
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
V + G + + G + +P E + +
Sbjct: 209 DAVH--------VAQCNALVGRDASFKSVVVTFGGDVVRLHPRVNYAAPGGEAELFGLYF 260
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDS 401
++ Q ++ + H + S + KG G + + G V + A + + +
Sbjct: 261 ADAGQHLEHRLVIDHDTPHCRSNVAYKGALQGQDAHAVWIGDVLIRAAALGTDTYELNRN 320
Query: 402 LLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++ + ++P +E + H + T + DE LFY RGIP + A L+V GF
Sbjct: 321 LVLTDGARVDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPADEARRLVVRGF 380
Query: 461 VREVLQKLPM-EFAVEAQKLIDISLEGSV 488
E++Q++ + E + I+ LE +V
Sbjct: 381 FAELVQQIGVAEIQDRLLEKIEAELEETV 409
>gi|304397639|ref|ZP_07379516.1| FeS assembly protein SufD [Pantoea sp. aB]
gi|304354811|gb|EFM19181.1| FeS assembly protein SufD [Pantoea sp. aB]
Length = 426
Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats.
Identities = 71/416 (17%), Positives = 137/416 (32%), Gaps = 45/416 (10%)
Query: 59 LLAYRRWLTM---KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
L A + W + P+ ++ + L S V P+ +T
Sbjct: 28 LQAQQHWQQLMRVGLPT---RKHENWKYTPLDTLL---------SQQFVLPDAPQTLSAE 75
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+ + A V V F+ E V + +
Sbjct: 76 QVDALALPLDAIRL------------VYVDGQFQPEFSSRDVELFE----VQHCVAAEHR 119
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ---FERTL 232
L V + L ++ + + + + +G + + + TG R
Sbjct: 120 PLPAAVQPE--IFLHLTESLAEEVTTLRLARGKSAARPIYLLHITSGQQTGMNTVHYRHH 177
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ +E + +E + DNA++ ++ + + Y
Sbjct: 178 LQLEESAEAEVIEHY-VSLDERAHFTGTRFTFAVGDNAKLTHTKL-------AFESSASY 229
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+F G ++S T G+ ++ S L GE + S+ + + D+
Sbjct: 230 HFAHN-DLVIGNDGQVSSTSFLLGAGLSRHNTSTQLNGENTTLAINSLVLPVKQEVADTR 288
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + SR + K I + G + V + A + ++LL+G T
Sbjct: 289 TYLEHNKGHCMSRQMHKTIVRDKGRAVFNGHIKVAQHALKTDGQMTNNNLLLGKLSEVDT 348
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H AT +I DE +FY RGI ++AA +I++ F E+ + L
Sbjct: 349 KPQLEIYADDVKCSHGATIGRIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETL 404
>gi|238757750|ref|ZP_04618933.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
gi|238703993|gb|EEP96527.1| hypothetical protein yaldo0001_35070 [Yersinia aldovae ATCC 35236]
Length = 412
Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats.
Identities = 59/306 (19%), Positives = 106/306 (34%), Gaps = 21/306 (6%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + + +P+G L + T + L+I + + +
Sbjct: 117 HLTESLAQESLHIRLPQGETSDKPLYLLHISSGNDAEAVNTSHYRHHLMI-EPTAQAEVI 175
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E ++ A + + DNAE+ + + P G
Sbjct: 176 EHF-VSVNEQPHFTGARLTIAVGDNAELSHYKLAFESPRSYHFAHN--------DLVLGR 226
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 227 DARARSYSFLLGAGLTRHNTSAQLNGEGATLSMNSLLLPIGREICDTRTYLEHNKGYCES 286
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + G + V + A + ++LL+ T P +E
Sbjct: 287 RQLHKVIVRERGKAIFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 346
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME------FAVEAQK 478
H AT +I E LFY RGI + A +I+ F E+ + + E A A++
Sbjct: 347 CSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAIHNETIRKVVLARIAER 406
Query: 479 LIDISL 484
L SL
Sbjct: 407 LAGESL 412
>gi|187734996|ref|YP_001877108.1| SufBD protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425048|gb|ACD04327.1| SufBD protein [Akkermansia muciniphila ATCC BAA-835]
Length = 417
Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats.
Identities = 102/446 (22%), Positives = 169/446 (37%), Gaps = 37/446 (8%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
LNE+ SA P W R A + + +PS R + F
Sbjct: 5 LNEE---QFSAG-FLPAWFEARRRHALEQAERLPEPS---RRMESWRF----------GT 47
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
G +SL+ V+ L E L IRE + A + EEL +
Sbjct: 48 PGNESLEHVEAALPVAPEALAPIIREHASMPEALRIVYANGLPV-------SLPEELPE- 99
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPV-GDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
G+ M + + + + PD +KYL T G +AL A+ +G I + L
Sbjct: 100 GLSVMDMEDFVLQCPDTARKYLETETETLGSEKLSALTMALQHNGLV--IMADREISLPL 157
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
I+ F TL+IA+ GS + LE Q A+ + + +KY
Sbjct: 158 EILHFISGDNVAVFPSTLLIAETGSRLHILERHL-SADHGRQFCGALQQYHLSSASSVKY 216
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ VQ V +++ G+A + C+L G+ +
Sbjct: 217 ALVQELNSRSRA--------VELSHIMADDSAEMEHLVSHPGAAWARQETVCILNGDGAG 268
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S +++D T HL + +S ++ + +++ + G + V GA +
Sbjct: 269 VRLLSANHLKENKELDQRTCQKHLYRGASSNLLYANVLDDEASSIFSGMILVAEGAHDTS 328
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L++ A++IP +E H + TS IS E +FY L RGIPE+ A
Sbjct: 329 AYQSNRNLILSPRAEANSIPGLEILADRVQCSHGSATSSISPEEIFYLLSRGIPEQTARR 388
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLI 480
+I GF++ VL + E A + I
Sbjct: 389 MIAQGFLKHVLDQFGDETIRTAVESI 414
>gi|260772564|ref|ZP_05881480.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
gi|260611703|gb|EEX36906.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
Length = 419
Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats.
Identities = 63/424 (14%), Positives = 138/424 (32%), Gaps = 37/424 (8%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
DW+ R A + P+ R A + L + L+
Sbjct: 17 DWLSPVRQQALNALRQTRWPT---RRTEAWRYTSLS---------CLEQLELSPKSDNAP 64
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+ I E L V + + GV +
Sbjct: 65 FNLAPIAGLETIDLVFVDGQLQTDLSALN------------LPQGVSIYSAQS-LPADQQ 111
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+ V + + +N + + F+ + C + + + R
Sbjct: 112 AAAVSRFSQVKPSRHLFGMVNDVLADNVLFIDVDPECHCTTPIRIVHHNHHGYEAHY-RV 170
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+ ++ +E + E + +AE+++ P G
Sbjct: 171 QVNLGHHGKLTLIEHAQGSGDNLR---TGFTECLLDTHAELEHYQFLINSPQALYFGGTH 227
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
++ ++++ T + GS ++ + GE + + ++ + + D
Sbjct: 228 FSLN--------DHAQLNSTVIGFGSQLSRLDVDIIHSGEHAEAKMNAVYLLGESEHFDM 279
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H N TS +GI + + G++ +HR A + +LL+ +
Sbjct: 280 HSTIEHAKPNGTSEENVRGIVGDKATAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGQIN 339
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT ++I +E L+Y + RGI A+ ++ GF++E++ ++P +
Sbjct: 340 TKPELEIYADDVKCAHGATVAEIEEEALYYLMSRGIGRSQALVMLNVGFIQELINQMPNQ 399
Query: 472 FAVE 475
E
Sbjct: 400 VLAE 403
>gi|21227190|ref|NP_633112.1| ABC transporter ATP-binding protein [Methanosarcina mazei Go1]
gi|20905528|gb|AAM30784.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
Length = 407
Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats.
Identities = 89/400 (22%), Positives = 162/400 (40%), Gaps = 23/400 (5%)
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
DF+ Y K + L +D E +T ++G+ E+ AV
Sbjct: 25 DFELEKYEEGSKVSKPIEDLQSLDEESKKTLLQVGVIPSEEGRSGSFLVLDNAVS----- 79
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
LK V M +A+ E + +K Y +V V + Y A DG F
Sbjct: 80 -------HSTLKDKNVELMSTHKAM-EKYEWLKDYSWKLVQVDADKYTAKTYLEDADGYF 131
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ +P G + M + T + K Q +II +EG+ + + GCT + E LH +
Sbjct: 132 IRVPAGKKTSMPVQTCLMLGSKKAAQTVHNIIIVEEGATLDIITGCTTKKGVEEGLHLGI 191
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
E+ + ++ + NW + + + +S
Sbjct: 192 SEMYIKKGGTLNFTMIHNWAEQIGVRPRTVVS-------VEEGGTYVSNYICLKPVRSVQ 244
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YP+ L GE + +IAI++ ++D G+K + A T + ++S+ I+ G R
Sbjct: 245 TYPTVRLEGEGAVTRLNTIAIAHPGSELDLGSKAIFNAPGTRAELISRTITIGG-RLIAR 303
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G++ A ++ +C L++ + IP +E+ L HEA KI+ + + Y
Sbjct: 304 GEMI--GNAKGAKGHLECKGLVLTDKGSQLAIPILEANVDDIELTHEAAVGKIAKDQVEY 361
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ RG+ E+ A+ +I+ GF+ ++ +P E E + I
Sbjct: 362 LMARGLTEDEAVGMIIRGFLDVGIRGIPEELKEEIENTIA 401
>gi|119476386|ref|ZP_01616737.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
gi|119450250|gb|EAW31485.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
Length = 418
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 73/418 (17%), Positives = 154/418 (36%), Gaps = 39/418 (9%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
DW+ R + + P+ + A + + + D PEL+
Sbjct: 17 DWLSPKRQQSLELLQQSRWPT---RKTEAWKYTSVNMLVDATFAETSDGIFDA-PELIDN 72
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+ + + + + GV S + SG+ I++ E +
Sbjct: 73 LDSIDLLLVD-----GVLRSDIGDLP-----------------SGLSIYSIADTPIEQRE 110
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+ + T +++ +N + T G + + +GV+ + R + R
Sbjct: 111 WAAE-VFTGAKPSKHYFGLVNDVLATAGVLIDVAEGVKVDRPIRVICRQSNGCES-HTRI 168
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+ + +E + + E + ++A +++ + G
Sbjct: 169 LMRLGSNAEAVIIEDF---AGEVKSFNTGFSEYIVGESATLEHYRIAMNTGEAISIGGCH 225
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+N RS ++ T + GS+++ GE + + + + NG + D
Sbjct: 226 FNLN--------YRSALNSTVVGLGSSLSRLDIDVNHIGEYATAKLNAFYLLNGSETFDL 277
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H+A N TS +GI A S + G++ +HR A + +LL+ N +
Sbjct: 278 HSSIEHIAANGTSEENVRGIVADSSRAVFNGRIHIHRNAQKTLAELNNRNLLLSRNAEIY 337
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P +E H AT ++I E L+Y RG+ + A ++ GF+ E++ ++P
Sbjct: 338 TKPELEIYADDVRCAHGATIAEIDKEALYYLQSRGMSKAQAQIMLSFGFINELVDQMP 395
>gi|306836143|ref|ZP_07469129.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49726]
gi|304567993|gb|EFM43572.1| FeS assembly protein SufD [Corynebacterium accolens ATCC 49726]
Length = 384
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 65/324 (20%), Positives = 114/324 (35%), Gaps = 20/324 (6%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E D + L V D A ++ +G V + V+ ++ F +
Sbjct: 71 ETVDRDDERLGRVGKPSDRVAAQAWTS-MPEGQVVTVDPEVQVEDPITITFTGKGEDVTS 129
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F T I + + + + + HA VE + D A + +W
Sbjct: 130 FGATSIEVGHHAEATVV-----LKYVGSGTHADNVEFILGDGAHLTVIVDVDWENDAVHL 184
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ G + + G + P E + ++ Q
Sbjct: 185 SNQV--------AQVGRDAVLRHNSAIFGGEVVRIVPRVNFTAPGGDAELLGVYFADSGQ 236
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR----GKVSVHRGAAHSRNFTQCDSLL 403
++ + H N S ++ KG G N R G V + A + + ++L+
Sbjct: 237 YFENRMLVDHSVPNCRSNVLYKGALQGEKKNEARTCWVGDVLIRSNAQGTDTYETNNNLI 296
Query: 404 IGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ + A IP +E + H AT + D LFY + RGIPE A LI+ GF
Sbjct: 297 LTDGARADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFN 356
Query: 463 EVLQKLPME-FAVEAQKLIDISLE 485
EV+ ++P++ + E + I LE
Sbjct: 357 EVIHRIPVQSLSEELENRISEELE 380
>gi|3378158|emb|CAA73004.1| hypothetical protein [Eimeria tenella]
Length = 387
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 9/341 (2%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
+R AY K P W P I +DD+ YY+ P +S++++ +L +K+G
Sbjct: 56 FRYKAYLLLKKFKQPDWCFFEIPDIFYDDISYYSIPSKFNSKKSINNMFNSIL---DKIG 112
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ +E ++++ +A+D V DSVS+V T L K+G+IF+P EAI LV Y
Sbjct: 113 LNSQENKLIS-----TLAIDIVLDSVSIVDTITNFLIKTGIIFIPFFEAINYFSYLVFSY 167
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ T+VP+ DNF++ LNS +F+ GSF +I K ++C + LSTYFR + QFERTL+I D
Sbjct: 168 IGTIVPLEDNFFSTLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFERTLLIVD 227
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
SY+ Y EGC+AP E+QLH A+VE++ + + YST+QNWY GD G+GG+YNF T
Sbjct: 228 NSSYIIYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTIQNWYRGDQSGEGGLYNFTT 287
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
KRG C ++ + W Q+E GSAITWKYPS L G S F+S+++ + Q D+G KML
Sbjct: 288 KRGWCL-KKALLDWVQIEMGSAITWKYPSTYLIGNYSSSNFFSLSLISDMQISDTGNKML 346
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
H+ T S + SK IS S YRG V + + A ++ N++
Sbjct: 347 HIGSYTKSHVYSKSISLNKSIYAYRGLVKIFKNAKYTYNYS 387
>gi|296111529|ref|YP_003621911.1| hypothetical protein LKI_07015 [Leuconostoc kimchii IMSNU 11154]
gi|295833061|gb|ADG40942.1| hypothetical protein LKI_07015 [Leuconostoc kimchii IMSNU 11154]
Length = 393
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 83/424 (19%), Positives = 165/424 (38%), Gaps = 44/424 (10%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
+ P +A++RY A DD+ Q + + E+LGI + Q
Sbjct: 8 KDLPMPIFAKVRYHAWLLDDM------------QPALEFTDQGYFNQEELGIEVSGQ--- 52
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ + ++L + GVI M + +A H LVKK + +V+P
Sbjct: 53 ----------------STTYSKLTDDLIRQGVILMSMQDAQQRHQQLVKKLIGSVIPNNL 96
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIADEGSYVSYL 244
+ AA N F G F+YIP + L ++ G R + + V +
Sbjct: 97 DRLAAQNFNAFNTGIFLYIPDNTQIKHVLHLTLNHLSVTGKDFIARIFVYVGQNVTVDMM 156
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ E + V+E++A A++ Y+ V + R G
Sbjct: 157 Q-LIHSADLEKSKASVVIEVLAATGAQVNYANVDAFSQK--------TTGYINRQANVGD 207
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + W+ + L GE + IA+++ Q T++ + +++
Sbjct: 208 HATVDWSNVSFNDGNVITKLESRLNGEGATSHVGVIALTHKKQTQGLVTEVRNTGRHSVG 267
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I +G+ S + G + +GA S + L++ ++ P + +
Sbjct: 268 HIFQRGVILNHSALIFNGIGRIIKGAKGSDAQQESRVLMLSHHARGEANPLLLIDENDVT 327
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
H A+ ++ ++ ++Y + RG+ E+ A L++ GF+ ++L K+P + A Q +ID +
Sbjct: 328 AGHAASVGRVDEQQMYYLMSRGLTEKVARKLVIRGFMGQILAKMPTKAAR--QAVID-EI 384
Query: 485 EGSV 488
E +
Sbjct: 385 ERKL 388
>gi|110834728|ref|YP_693587.1| ABC transporter permease [Alcanivorax borkumensis SK2]
gi|110647839|emb|CAL17315.1| permease component of ABC-tranporter [Alcanivorax borkumensis SK2]
Length = 409
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/295 (20%), Positives = 108/295 (36%), Gaps = 12/295 (4%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIAD 236
+ +A NSAV + + + R + ++ R +++ +
Sbjct: 101 GPAINGLQTPFAFYNSAVASQPIVLTVAANTRIEQPIHVQIQAASDTPAHCNPRLVVVLN 160
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+ + +E A L AV L+ DNA++ + +Q I
Sbjct: 161 QGAEAAVIEHYHAQG---KALTNAVTALITADNAQLTHYRLQGEQASTIHIGTLI----- 212
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ SK+ QL TG+ + L+ + I + +D+ +
Sbjct: 213 ---IDQQGASKVDSYQLMTGNRLRRNDVRALMNKSGAELNMKGIFVVRDNSHVDNQMCVE 269
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H N S KG++ + G++ +H GA+ + +LL+ +T P +
Sbjct: 270 HAVPNGESDQNFKGLAGERGKAVFNGRIHIHPGASGTNAGLSNKNLLLNPGAEINTKPEL 329
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
E N H T ++ FY RGIP A ++ GFV E+L LP E
Sbjct: 330 EIYNDDVKCAHGTTVGQLDAMQQFYLQSRGIPAAEAKRMLSLGFVNELLMTLPHE 384
>gi|114764566|ref|ZP_01443770.1| FeS assembly protein SufD [Pelagibaca bermudensis HTCC2601]
gi|114542942|gb|EAU45962.1| FeS assembly protein SufD [Roseovarius sp. HTCC2601]
Length = 425
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 87/430 (20%), Positives = 152/430 (35%), Gaps = 42/430 (9%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + P+++V ++ E
Sbjct: 30 RKDALARLRAMGLP---HARDEYWKYT------RPETLVSAEAPKASVFEADEA-----P 75
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA--ICEHPDLVKK 175
E++ L V VD VFD+ + +EL GV +++A I DL
Sbjct: 76 IFGERDRL-----KIVFVDGVFDAEA-----SDELALEGVEIARLADATDIHWAKDLYGT 125
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
+ + AALN+A TDG + + + ++ + + ++
Sbjct: 126 LEANGQTPVERPLAALNTAFATDGILMRVTG--KVSKPINLIYHHKSDSSDAILHHVVKV 183
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G V+ LE A R V+E+ D + + Q D + + Y F
Sbjct: 184 EQGGDVTILENGPAAARF-----NKVMEVDVADRSGFHHVRTQ---GRDDERRAATYIFG 235
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G S L +T L G+ + + +G D +
Sbjct: 236 R-----LGTESTFKTFTLTVNGVMTRNECVLELNGDDAVAHVAGACMGDGDFHHDDTVFI 290
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A N SR V K + + ++GK+ V A + + SLL+ ++ P
Sbjct: 291 THDAVNCESRQVFKKVLRNGATGVFQGKILVKPDAQKTDGYQISQSLLLDDDSQFLAKPE 350
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H +T+ I ++ LFY RG+P A L+ F+ E +Q++ E
Sbjct: 351 LEIYADDVACSHGSTSGAIDEDGLFYLRARGLPRGIAEDLLTIAFIAEAVQEVEDEGLQE 410
Query: 475 EAQKLIDISL 484
E + ++ L
Sbjct: 411 EIVERVEAWL 420
>gi|157145961|ref|YP_001453280.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
koseri ATCC BAA-895]
gi|157083166|gb|ABV12844.1| hypothetical protein CKO_01714 [Citrobacter koseri ATCC BAA-895]
Length = 423
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/412 (16%), Positives = 127/412 (30%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L V + + + ++ R+
Sbjct: 33 LQQMLRLGLPT---RKHENWKYTPL--------------EGLVSSQFVSRFAEVTQEQRD 75
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + SG E +
Sbjct: 76 ALALDIDAVRLVFVDGKFSP-----QLSDSATASGFDIAINDE-----------RQALGA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ + + + + R L +E T + L
Sbjct: 120 PVQPEVFLHLTESLAQSVTHIRVKRNQRPSKPLLLMHITQGLEGDEVNTAHYRHHL-ELA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E A + + NA + + + P
Sbjct: 179 EGAEATVIEHY-VSLNAARHFTGARLTMNVAANAHLHHIKLAFENPVSHHFAHN------ 231
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ G A+ S L GE + S+A+ + D+ T +
Sbjct: 232 --DILLAADASAHSHSFLLGDAVLRHNTSTQLNGENTTLRINSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI E+ A +I+ F E+ + L
Sbjct: 350 EIYADDVKCSHGATVGRIDDEQMFYLRSRGIGEQDARQMILYAFAAELTEAL 401
>gi|323136296|ref|ZP_08071378.1| FeS assembly protein SufD [Methylocystis sp. ATCC 49242]
gi|322398370|gb|EFY00890.1| FeS assembly protein SufD [Methylocystis sp. ATCC 49242]
Length = 430
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 77/427 (18%), Positives = 147/427 (34%), Gaps = 37/427 (8%)
Query: 46 AKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
+K P R A+ + P+ R A + D+ A + + S
Sbjct: 20 REKGAP----RLREAAWDDFSRKGLPN---RRVEAWHYTDIKAALAKPAPIAAASRAAPS 72
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E +L I L GV ++ A GV+ + +A
Sbjct: 73 LERAHDSLRLVI-------LDGVFRPDLSDVARL--------------PEGVVAQSLRDA 111
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKG 224
+ + V L++ D+ +LN+A+ DG + I G + F +
Sbjct: 112 LAQSDPQVMDALASADVGADDAMVSLNAALMQDGVVLRIAPGAVIERAIELASFVSTDAA 171
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
F R+L + +G+ + +E A + L A + + G
Sbjct: 172 QSTFSRSLALVGKGARATLIETVGALANAPA-QDNQTLILRLAAGAALDLVS---HVSGA 227
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
++ + + + + + L G+ + + L GE++ ++
Sbjct: 228 AEQAVRVMSLL----AHLDEGATVKSYALIEGAGLLRRQIFARLDGERAHIALNGATLAR 283
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G Q D+ + N SR + I S ++G++ V GA + Q LL+
Sbjct: 284 GRQHADTTLVVDQAKPNGESRERFRNILDEQSVGVFQGRIVVRPGAQKTDGAMQSKGLLL 343
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ + P +E H AT ++ + LFY + RG+P A AL++ F E
Sbjct: 344 SDGATMNNKPELEIFADDVQCSHGATCGRLDKDQLFYLMARGLPRREAEALLIEAFANEA 403
Query: 465 LQKLPME 471
++ L +
Sbjct: 404 MEGLDDD 410
>gi|161503531|ref|YP_001570643.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160864878|gb|ABX21501.1| hypothetical protein SARI_01607 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 421
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 139/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L +A + I + + R+
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLDGFAHSQFIQQ--------------FAAISAAQRD 75
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 76 ALALKNDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVQPEIFLHLTESLAHCVTYIQVRRNQRPVKPLLLMHITQGVDGDELNTAHYRHHL-SLA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + + A + + +NA +++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSHGEAK-HFTGARLTMKVAENARLRHIKL-------TFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-CFLLGAAVLRHHTSTQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATVGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|297198864|ref|ZP_06916261.1| FeS assembly protein SufD [Streptomyces sviceus ATCC 29083]
gi|197711215|gb|EDY55249.1| FeS assembly protein SufD [Streptomyces sviceus ATCC 29083]
Length = 393
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/383 (18%), Positives = 134/383 (34%), Gaps = 28/383 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+++ P+ T + + D +V T V + E
Sbjct: 34 SFDVADFPVPHGREEEWRFTPLERLRGLHDGTAVATG-----DGVKVDIEAPEGVVIETV 88
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
L D A SA G +PK + ++ +G +F
Sbjct: 89 GRDDARLGKAGTPVDRIAAQAYSAFEKAGVVT-VPKETVLTEPIRI--AVHGEGGVRFGH 145
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+I + + + + AA V+ + D A++ +VQ+W
Sbjct: 146 QVIELGAFAEAVVV-----IDHTGDAVLAANVDYILGDGAKLTVVSVQDWDDKAVH---- 196
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
V + G + + G + +P G E + + ++ Q +
Sbjct: 197 ----VAQHNALIGRDATFKSFVVTFGGDLVRLHPRVAYAGPGGEAELFGLYFTDAGQHQE 252
Query: 351 SGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H + S + KG G ++ + G V + A + + +L++ +
Sbjct: 253 HRLLVDHNTPHCKSNVAYKGALQGEGAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGAR 312
Query: 410 AHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++P +E + H + T + DE LFY + RGIP + A L+V GF E++Q++
Sbjct: 313 VDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPADEARRLVVRGFFAELVQQI 372
Query: 469 PMEFAVEAQKL---IDISLEGSV 488
++ E +L ID LE +V
Sbjct: 373 GVDDIEE--RLLTKIDEELEATV 393
>gi|302550612|ref|ZP_07302954.1| FeS assembly protein SufD [Streptomyces viridochromogenes DSM
40736]
gi|302468230|gb|EFL31323.1| FeS assembly protein SufD [Streptomyces viridochromogenes DSM
40736]
Length = 394
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 61/307 (19%), Positives = 117/307 (38%), Gaps = 18/307 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V +PK + ++ +G F +I + +
Sbjct: 103 DRVAAQAYSAFEKASVVTVPKETVLTEPIRI--AVHGEGGTAFGHQVIELGPFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ + D A++ +VQ+W + + G
Sbjct: 160 ----IDHTGDAVLAANVDYLLGDGAKLTVVSVQDWDDKAVH--------IAQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P G E + + ++ Q + + H + S
Sbjct: 208 ASFKSVVVTFGGDVVRLHPRVSYAGPGGEAELFGLYFTDRSQHQEHRLLVDHNVPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 VVYKGALQGDDAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY + RGIPE A L+V GF E++Q++ + E I+
Sbjct: 328 GAGHASATGRFDDEQLFYLMARGIPEYEARRLVVRGFFAELVQQIGLPDIEERLIAKIEE 387
Query: 483 SLEGSVG 489
LE SVG
Sbjct: 388 ELEASVG 394
>gi|114768834|ref|ZP_01446460.1| FeS assembly protein SufD [alpha proteobacterium HTCC2255]
gi|114549751|gb|EAU52632.1| FeS assembly protein SufD [alpha proteobacterium HTCC2255]
Length = 427
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/438 (17%), Positives = 147/438 (33%), Gaps = 45/438 (10%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W R A + P+ R + + PQ L + E +
Sbjct: 26 WANNIRSEALVAFNDFGVPT---KRDEYWKYTN------------PQKLTMIPTEPAALF 70
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
P+ E + + V VD + D ++L G + +A +
Sbjct: 71 SNDEPPMFE----SIDRVKIVFVDGILDLSQ-----SDDLILEGATIETLVDATSKDIHW 121
Query: 173 VKKYLSTV----VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
K ++ AALN+A+ +G + I +C L+ + N + +
Sbjct: 122 AKDLFGSLEKNGQKPVKRPLAALNTAMAAEGLVIRITD--KCKKPLAIRYIHNSETSDAL 179
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+I + + + LE R +V+E+ DNA+ + Q G +
Sbjct: 180 VHNIIKIESNAQFTLLESGAGAARF-----NSVLEVDVADNADFHHVRTQ----GRDHER 230
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF-Q 347
+ + + G S + +T G+ + +G
Sbjct: 231 KTVTHIFGR----LGKESIFKSFTMTVNGTLTRNDAVLEFTGDNARATVAGATAGDGESF 286
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D + H A N SR V K + + ++GK+ V A + + LL+ +N
Sbjct: 287 HHDDTVFITHDAVNCESRQVFKKVLRNGATGVFQGKILVKADAQKTDGYQISQGLLLDDN 346
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
P +E H +T I ++ +FY + RG+P + A ++V F+ E + +
Sbjct: 347 SNFLAKPELEIYADDVACSHGSTVGAIDEDAIFYLVSRGVPRKQAQDMLVLAFLAEAIDE 406
Query: 468 LP-MEFAVEAQKLIDISL 484
+ + A + + +
Sbjct: 407 IDSNDLADDINDRLAAWM 424
>gi|110679913|ref|YP_682920.1| FeS assembly protein SufD, putative [Roseobacter denitrificans OCh
114]
gi|109456029|gb|ABG32234.1| FeS assembly protein SufD, putative [Roseobacter denitrificans OCh
114]
Length = 426
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 80/411 (19%), Positives = 141/411 (34%), Gaps = 38/411 (9%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M P R + ++ +D P L +++ I
Sbjct: 38 EAMGLPD---RRDEYWKYTHPDTLTQADAVPAALFHNDEAP-LFGEIDRIRI-------- 85
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH-PDLVKKYLSTVVPVG 184
V VD VFD+ + E L + + A DL +
Sbjct: 86 -------VFVDGVFDAEASDDLVGEGLA---IERLAEQSADIHWARDLYGALEARGQSPV 135
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
+ AALN+A TDG +++ + +S +++ ++ + +I D G+ ++ L
Sbjct: 136 ERPLAALNTAYATDGVLIHVTG--KASKPVSLHYQHRDETSDAILHHVIKVDAGAELTLL 193
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E A R V+E+ D + Q G + + T+ G
Sbjct: 194 ETGPAAARF-----NKVMEVDIADTGVFHHVRAQ----GRDHERRAATHIFTR----LGS 240
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
S L +T L G+ + + +G D + H A N S
Sbjct: 241 ESTFKSFTLTANGVLTRNECIIELTGDDAIAHVAGACVGDGDFHHDDTVFITHDAVNCES 300
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R V K + + ++GK+ V GA + + SLL+ ++ P +E
Sbjct: 301 RQVFKKVLRNGATGVFQGKILVQPGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDVA 360
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
H +T+ I + LFY RG+P A L+ F+ E + ++ E E
Sbjct: 361 CSHGSTSGAIDETALFYLRSRGVPRAQATDLLTLAFLAEAVDEIEDEALRE 411
>gi|329296200|ref|ZP_08253536.1| SufD [Plautia stali symbiont]
Length = 425
Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats.
Identities = 75/425 (17%), Positives = 144/425 (33%), Gaps = 48/425 (11%)
Query: 59 LLAYRRWLTM---KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
L A + W + P+ ++ + L D L + + +
Sbjct: 28 LQAQQHWQQLMRVGPPT---RKHENWKYTAL------------------DNLLTQQFVQA 66
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
P E +A + A+ VF V F+ EL + ++
Sbjct: 67 EAPGVSAEQVAALALPLDAICLVF----VDGRFQPELSSRDTGLFD----VQHSRAAGRR 118
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK----GTGQFERT 231
L V + L ++ + + + +P+G L + + T
Sbjct: 119 PLPAAVQPE--VFLHLTESLAEEVTSIRLPRGKAAAQPLYLLHITSGQADALNTVHHRHH 176
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L + G+ +E A DNA++K++ +
Sbjct: 177 L-ELESGAEAQVIEHYVTLNG-RAHFTGARFTFAVGDNAQLKHTKLAFEESSSYHFAHN- 233
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
G +++S T G+ ++ S L GE + S+ + G + D+
Sbjct: 234 -------DIVIGRDAQVSSTSFLLGAGLSRHNTSLQLNGENTQLSLNSLVLPVGSEVADT 286
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H + SR + K IS + + G + V + A + ++LL+G
Sbjct: 287 RSYLEHNKGHCLSRQLHKTISRDKGRSVFNGHIKVAQHALKTDGQMTNNNLLLGRLAEVD 346
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT +I DE +FY RGI E+AA ++++ F E+ + L +
Sbjct: 347 TKPQLEIYADDVKCSHGATIGRIDDEQMFYLRSRGIAEDAAQQMLIHAFAAELTEALEDD 406
Query: 472 FAVEA 476
+
Sbjct: 407 ALRQV 411
>gi|241204824|ref|YP_002975920.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858714|gb|ACS56381.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 424
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/432 (17%), Positives = 138/432 (31%), Gaps = 45/432 (10%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
R P+ R A + DL + + L+
Sbjct: 34 TALRDRLLDDLKKAGLPT---RRIEAWHYTDLKNLLRTVPQQAGDAGSEALEPLVADATV 90
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
L + A V+ + + G+ + +A+
Sbjct: 91 LAVIQGHSNQKATADGLGVSAYS--------EHLLDGSAADGLDALGSDDAV-------- 134
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+N + DG + +P L F T R +
Sbjct: 135 --------------GRINGSFVRDGYVIDVPAETELENPLEIQFIHAGGQT--HTRLPVS 178
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
G + +E D L + V ++ + E+ + +Q D+
Sbjct: 179 FGAGVKATVIERHRTVTGDAA-LVSHVTDITVGEGTELTWIILQQQGADDTHLG------ 231
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G +K+ + G + + + GE + I + G D
Sbjct: 232 --QIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGGDTHTDVTMV 289
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H NT S V + + + ++G + V A + C++LL+ ++ P
Sbjct: 290 LGHDVPNTGSTEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKP 349
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + I HL+Y + RGIPE A A++VN FV E++++L E V
Sbjct: 350 ELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALV 409
Query: 475 EAQK-LIDISLE 485
EA + +I LE
Sbjct: 410 EALEGVISAWLE 421
>gi|308186668|ref|YP_003930799.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
gi|308057178|gb|ADO09350.1| Iron-sulfur cluster biosynthesis protein sufD [Pantoea vagans C9-1]
Length = 426
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 72/424 (16%), Positives = 140/424 (33%), Gaps = 45/424 (10%)
Query: 59 LLAYRRWLTM---KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
L A + W + P+ ++ + L S V P+ +T
Sbjct: 28 LQAQQHWQQLMRVGLPT---RKHENWKYTPLDTLL---------SQQFVLPDAPQTLSAE 75
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+ + A V V F+ V + ++
Sbjct: 76 QVDALALPLDAIRL------------VYVDGQFQPAFSSRDVELFE----VQHSVAAERR 119
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ---FERTL 232
L V + L ++ + + + + +G + + + TG R
Sbjct: 120 PLPAAVQPE--VFLHLTESLAEEVTTLRLARGKAAARPVYLLHITSGQQTGMNTVHYRHH 177
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ +E + +E + DNA++ ++ + + Y
Sbjct: 178 LQLEESAEAEVIEHY-VSLDERAHFTGTRFTFAIGDNAKLTHTKL-------AFESSASY 229
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+F G ++S T G+ ++ S L GE + S+ + + D+
Sbjct: 230 HFAHN-DLVIGNDGQVSSTSFLLGAGLSRHNTSTQLNGENTTLAINSLVLPVKQEVADTR 288
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H + SR + K I + G + V + A + ++LL+G T
Sbjct: 289 TYLEHNKGHCVSRQMHKTIVRDKGRAVFNGHIKVAQHALKTDGQMTNNNLLLGKLSEVDT 348
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H AT +I DE +FY RGI ++AA +I++ F E+ + L E
Sbjct: 349 KPQLEIYADDVKCSHGATIGRIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTETLENEV 408
Query: 473 AVEA 476
+A
Sbjct: 409 MRQA 412
>gi|295839571|ref|ZP_06826504.1| FeS assembly protein SufD [Streptomyces sp. SPB74]
gi|197696846|gb|EDY43779.1| FeS assembly protein SufD [Streptomyces sp. SPB74]
Length = 391
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 68/326 (20%), Positives = 120/326 (36%), Gaps = 19/326 (5%)
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
E D + D A SA S + +PK R + R + G
Sbjct: 82 QETVDREDPRVGRGGTPVDRVAAQAYSAF-EKASVITVPKEARPAEPIRITVRGH--GGV 138
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ +I + + + + AA V+ + D A++ +VQ+W
Sbjct: 139 AYAHQVIELGAFAEAVVV-----LDHTGDAVLAANVDYLLGDGAKLTVVSVQDWGTETVH 193
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V + G + + G + +P E + ++
Sbjct: 194 --------VGQHNALIGRDASFKSVVVTFGGDLVRLHPRVSYTAPGGEAELLGLYFTDKG 245
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q + + H A + TS + KG G ++ + G V + A + + +L++
Sbjct: 246 QHHEHRLFVDHNAPHCTSNVSYKGALQGEGAHAVWIGDVLIEAAAEGTDTYEMNRNLVLT 305
Query: 406 NNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ ++P +E + H +TT + DE LFY + RGI EE A L+V GF E+
Sbjct: 306 DGARVDSVPNLEIETGEIVGAGHASTTGRFDDEQLFYLMARGIAEEDARRLVVRGFFAEL 365
Query: 465 LQKLPMEFAVE-AQKLIDISLEGSVG 489
+QK+ + E I LEG+VG
Sbjct: 366 VQKIGLPDVEERLLAKIGEELEGAVG 391
>gi|290559398|gb|EFD92730.1| SufBD protein [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 252
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 122/260 (46%), Positives = 162/260 (62%), Gaps = 8/260 (3%)
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+++S V + K+EL+ GVIF A+ EHP+LVKKY V+ DN +AALNSAV++
Sbjct: 1 MYESEVVYNSVKKELEALGVIFCDTDTAVREHPELVKKYFGKVISPNDNKFAALNSAVWS 60
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
GSF+Y+PKGV+ PM L YFRIN GQFERTLIIADEG+ ++Y+EGCTAP ++ L
Sbjct: 61 GGSFIYVPKGVKVPMPLQAYFRINAANMGQFERTLIIADEGADLTYIEGCTAPVYSKDAL 120
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
HAAVVE++A NA +KY TVQNW +YN VTKR + + W GS
Sbjct: 121 HAAVVEVIAHKNAHVKYITVQNW-------SSDVYNLVTKRAFAYA-NAFVEWVDANMGS 172
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+T KYPS L + S+A++N Q D+GTK +HLA +T+S I SK I
Sbjct: 173 KVTEKYPSVYLMERGAKSNVLSVALANKGQHQDTGTKAVHLAPDTSSVIRSKSICLNGGR 232
Query: 378 NTYRGKVSVHRGAAHSRNFT 397
TYRG V V++GA ++ T
Sbjct: 233 TTYRGLVKVNKGATDIKSST 252
>gi|296102713|ref|YP_003612859.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057172|gb|ADF61910.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 423
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 71/414 (17%), Positives = 132/414 (31%), Gaps = 48/414 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L ++ E + + R+
Sbjct: 33 LQQMLRLGLPT---RKHENWKYTPL--------------EGLLNAEFVSQRADITPTQRD 75
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + +SG E S
Sbjct: 76 ALALNVDALRLVFVDGQF-----RPDLSDSTDESGYTIAINDE-----------RQSLTA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ + +++ + R L +E T + L
Sbjct: 120 PVQPEVFLHLTESLAQSVTQIHVKRNQRPAKPLLLMHITQGLDGDEINTAHYRHHL-ELA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + NA++ + + P
Sbjct: 179 EGAEATIIEHYVSLND-TRHFTGARLSMNVAANAQLHHIKLAFENPQSHHFAHN------ 231
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + G A+ S L GE + S+A+ + D+ T +
Sbjct: 232 --DILLGQDAAAYSHSFLLGGAVLRHNTSTQLNGENTTLRINSLAMPVKSEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
E H AT +I DE +FY RGI ++AA +I+ F E+ + L
Sbjct: 350 EIYADDVKCSHGATVGRIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALDD 403
>gi|298675869|ref|YP_003727619.1| SufBD protein [Methanohalobium evestigatum Z-7303]
gi|298288857|gb|ADI74823.1| SufBD protein [Methanohalobium evestigatum Z-7303]
Length = 411
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 84/400 (21%), Positives = 166/400 (41%), Gaps = 23/400 (5%)
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
DFD Y AP ++L + D + + G+ + V ++
Sbjct: 28 DFDLSEYEIAPSESEQVETLTEWDEKTQKQLLNTGVVPS--------GEGRSGSLVVLNN 79
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
++ K E V +P +A E D + Y +VPV + Y A +G F
Sbjct: 80 AVSYSSTKSE----NVELIPTKQA-REKYDWLDDYAWNLVPVDTDKYTAATYLQQPNGYF 134
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ G + + + T + K Q +II +E + + + GCT + + LH +
Sbjct: 135 IRAHAGKKETLPVQTCLLLGNKEVSQTVHNIIIVEENAELEIITGCTTKEEVMSGLHLGI 194
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
E+ ++ ++ + NW I + + I+
Sbjct: 195 SEMYVKKGGKLTFTMIHNWAED-------IGVRPRTKIKVEEGGTFINNYIALKPVKSIQ 247
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YP+ L G+ + F +IA+ + ++D G+K+ + T + ++S+ I+ G + R
Sbjct: 248 SYPTAFLDGKGAVARFNTIAVGHPGSELDLGSKVEFNSPETKAELISRTITTGGN-VVAR 306
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G+ + A +++ +C L++ ++ IP +E+ + L HEA KI+ + + Y
Sbjct: 307 GE--MVGNADNAKGHLECRGLVLSDDGSQRAIPILEANLQNVELTHEAAVGKIARDQVEY 364
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ RG+ E+ A+ +IV GF+ ++ LP E + + ID
Sbjct: 365 LMSRGLSEDEAVGMIVRGFLDVGIKGLPEELESDINETID 404
>gi|221639869|ref|YP_002526131.1| SufBD protein [Rhodobacter sphaeroides KD131]
gi|221160650|gb|ACM01630.1| SufBD protein [Rhodobacter sphaeroides KD131]
Length = 428
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 83/431 (19%), Positives = 151/431 (35%), Gaps = 44/431 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + D + + + + D + + ++L +
Sbjct: 31 RFDALARLTAMGLPK---RRDEYWRYTDPASFNSAEPVPATTFDDGEEGMVFEAIDRLKL 87
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP---DLVK 174
V VD VFD+ + + L + +SEA + DL
Sbjct: 88 ---------------VFVDGVFDAAA-----SDPLALENIEIGLLSEAQSDIHWARDLYG 127
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ +AALN+A T+G + + P ++ + + + I
Sbjct: 128 VLEARGQVPVKRPFAALNTAFATEGVLIRVTGY--VPRPIALIYIHSSDTSDAVLHHCIR 185
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G+ V+ LE A R V+E+ + + Q G + +
Sbjct: 186 VESGADVTILENGPAAARFTK-----VMEVDVAEGGRFHHIRAQ----GRDHDRRASTHI 236
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + L +T L G+++ A+ +G D
Sbjct: 237 FAR----VAGKGLFKSFTLTANGVMTRNEAVIELVGDEAVAHVAGAAVGDGKFHHDDTVF 292
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + SR V K + + ++GK+ V GA + + SLL+ + P
Sbjct: 293 VTHEGEACESRQVFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDEDSVFLAKP 352
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H +T+ I + LFY RG+P +AA +L+V F+ E +Q++ E
Sbjct: 353 ELEIYADDVKCSHGSTSGAIDETGLFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENE--- 409
Query: 475 EAQKLIDISLE 485
E + I LE
Sbjct: 410 EIAEDIRQRLE 420
>gi|148261257|ref|YP_001235384.1| FeS assembly protein SufD [Acidiphilium cryptum JF-5]
gi|326404671|ref|YP_004284753.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
gi|146402938|gb|ABQ31465.1| Iron-regulated ABC transporter permease protein SufD [Acidiphilium
cryptum JF-5]
gi|325051533|dbj|BAJ81871.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
Length = 399
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 67/391 (17%), Positives = 123/391 (31%), Gaps = 34/391 (8%)
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
+LL ++ +P A + D T L+ + P E
Sbjct: 5 DLLDGFDLAALPGAAAREAAAARVRAGGWPTKRDEAWHYTDLAAGLRGFALGPAPAVEVA 64
Query: 167 CEHPD-----LVKKYLSTVVPVGDNFYAALNSAVFT-----------------DGSFVYI 204
E P+ V ++ + L A +
Sbjct: 65 AELPEGPRVVFVNGRFDAARSAAPDWVSQLGDAAADPARGGVVVALNTALAEDGVAITLA 124
Query: 205 PKGVRCPMELSTYFRINEKGT-GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
P + L + R I+ G+ ++ +E + LHA V E
Sbjct: 125 PGQQGGTLFLVALAAGRGETMPAIAPRHRIVLGAGATLTLIETARGEG---SYLHAPVFE 181
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ A + + +Q+ V + L G+ ++
Sbjct: 182 VDLGAGARLNHYRLQDESAEAVH--------VATIFAEIAGGAGYESFTLNRGARLSRNE 233
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
L G + + + G Q D T + H A + SR K + AG + ++G+
Sbjct: 234 THARLTGPAADVHLNAAQLLAGTQHGDVTTVVRHDAPDCASRQTVKSVLAGAARGVFQGR 293
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ V R A + + +LL+ + + P +E H AT + E LFY
Sbjct: 294 IEVDRIAQKTDGYQMNQALLLSDEAEIDSKPELEIFADDVKCSHGATIGALDPEQLFYLR 353
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
RG+P A ++++ F+ E L+ + E A
Sbjct: 354 SRGVPAAEAKSILIRAFLDEALEPVTDEAAR 384
>gi|332558881|ref|ZP_08413203.1| SufBD protein [Rhodobacter sphaeroides WS8N]
gi|332276593|gb|EGJ21908.1| SufBD protein [Rhodobacter sphaeroides WS8N]
Length = 427
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 83/431 (19%), Positives = 151/431 (35%), Gaps = 44/431 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + D + + + + D + + ++L +
Sbjct: 30 RFDALARLTAMGLPK---RRDEYWRYTDPASFNSAEPVPATTFDDGEEGMVFEAIDRLKL 86
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP---DLVK 174
V VD VFD+ + + L + +SEA + DL
Sbjct: 87 ---------------VFVDGVFDAAA-----SDPLALENIEIGLLSEAQSDIHWARDLYG 126
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ +AALN+A T+G + + P ++ + + + I
Sbjct: 127 VLEARGQVPVKRPFAALNTAFATEGVLIRVTGY--VPQPIALIYIHSSDTSDAVLHHCIR 184
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G+ V+ LE A R V+E+ + + Q G + +
Sbjct: 185 VETGADVTVLENGPAAARFTK-----VMEVDVAEGGRFHHIRAQ----GRDHDRRASTHI 235
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + L +T L G+++ A+ +G D
Sbjct: 236 FAR----VAGKGLFKSFTLTANGVMTRNEAVIELVGDEAVAHVAGAAVGDGKFHHDDTVF 291
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + SR V K + + ++GK+ V GA + + SLL+ + P
Sbjct: 292 VTHEGEACESRQVFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDEDSVFLAKP 351
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H +T+ I + LFY RG+P +AA +L+V F+ E +Q++ E
Sbjct: 352 ELEIYADDVKCSHGSTSGAIDETGLFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENE--- 408
Query: 475 EAQKLIDISLE 485
E + I LE
Sbjct: 409 EIAEDIRQRLE 419
>gi|238787123|ref|ZP_04630923.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
gi|238724911|gb|EEQ16551.1| hypothetical protein yfred0001_6090 [Yersinia frederiksenii ATCC
33641]
Length = 428
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/470 (16%), Positives = 137/470 (29%), Gaps = 77/470 (16%)
Query: 49 NEPDWMLEW-RLLAYRRW----------------------LTMKDPSWARIRYPAIDFDD 85
EP +LE R+ A + + L + PS ++ +
Sbjct: 2 QEPQNILEQQRIDALKHFGLLFKQRQSGYSTAATAHWQQVLQLGFPS---AKHEDWKYTP 58
Query: 86 LYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVV 145
L A V P L V VD +
Sbjct: 59 LERLLAHNFDFA--CAPAVTPAQRDALS-----------LVQDAHRLVFVDGRY------ 99
Query: 146 TTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIP 205
EL S ++ + + L ++ +G + +P
Sbjct: 100 ---SPELSDSECGPYQLTSMTE------NTQFPAAIQPE--VFLHLTESLAQEGLHIRLP 148
Query: 206 KGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
G + L + T + L I + + +E ++ A
Sbjct: 149 AGKQSDKPLYLLHISSGNDSDVVNTSHYRHHLTI-EVAAQAEVIEHF-VSLNEQPHFTGA 206
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ + DNAE+ + + ++ G+ +T
Sbjct: 207 RLTIAVGDNAELSHCKLAFETTQSYHFAHN--------DLVLERDARARSYSFLLGAGLT 258
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
S L GE + S+ + G + D+ T + H SR + K I +
Sbjct: 259 RHNTSAQLNGEGATLAINSLLLPIGREICDTRTYLEHNKGYCESRQLHKTIVRERGKAIF 318
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
G + V + A + ++LL+ T P +E H AT +I E LF
Sbjct: 319 NGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHGATVGRIDAEQLF 378
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPME------FAVEAQKLIDISL 484
Y RGI A +I+ F E+ + + E A A++L + SL
Sbjct: 379 YLQSRGINHADAQQMIIFAFAAELTEAIHDETIRKIVLARIAERLAEASL 428
>gi|146311419|ref|YP_001176493.1| cysteine desulfurase activator complex subunit SufD [Enterobacter
sp. 638]
gi|145318295|gb|ABP60442.1| Iron-regulated ABC transporter permease protein SufD [Enterobacter
sp. 638]
Length = 423
Score = 208 bits (528), Expect = 3e-51, Method: Composition-based stats.
Identities = 72/421 (17%), Positives = 133/421 (31%), Gaps = 49/421 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + + L DV P
Sbjct: 33 LQQMLRLGLPT---RKHENWKYTPLDGLLKSQFVT---RLADVSPAQRDAL--------- 77
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD ++ T E V +A+
Sbjct: 78 --ALNIDAVRLVFVDGCYNPALSDNT---EGSGFDVEINDNRQALP-------------A 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN----EKGTGQFERTLIIADE 237
PV + + L ++ + + I + R L ++ R + E
Sbjct: 120 PVQPDVFLHLTESLSQSVTHIRIKRNQRPAKPLLLLHITQGLEGDEVNTAHYRHHVELAE 179
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + +E + A V + NA++ + + P
Sbjct: 180 GADATVIEHY-VSLNETAHFTGARVTMNVAANAQLHHIKLAFENPACHHFAHN------- 231
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+ G ++ S L GE + S+A+ + D+ T + H
Sbjct: 232 -DLFMAADAAAFSHSFLLGGSVLRHNTSTQLNGENTTLRINSLAMPVKSEVCDTRTWVEH 290
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + G ++V + A + ++LL+G T P +E
Sbjct: 291 NKGYCNSRQMHKIIVNDKGRAVFNGMINVAQHAIKTDGQMTNNNLLLGRLSEVDTKPQLE 350
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +I DE +FY RGI ++AA +I+ F E+ + L E E +
Sbjct: 351 IYADDVKCSHGATVGRIDDEQMFYLRSRGIDKQAAQKMIIYAFAAELTEALGDE---ELK 407
Query: 478 K 478
+
Sbjct: 408 Q 408
>gi|148264497|ref|YP_001231203.1| SufBD protein [Geobacter uraniireducens Rf4]
gi|146397997|gb|ABQ26630.1| SufBD protein [Geobacter uraniireducens Rf4]
Length = 407
Score = 208 bits (528), Expect = 3e-51, Method: Composition-based stats.
Identities = 93/409 (22%), Positives = 150/409 (36%), Gaps = 26/409 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
P ID Y A L ++ ++ +G+ E +
Sbjct: 22 PDIDLAA--YQAEAAEHGKVAGLRELPDDVRERALSVGVDTGEACR--------MGSFFQ 71
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
D V +SG+ M I A+ E D +K Y + V + Y A
Sbjct: 72 MDHSVVF----AAAYQSGLEVMDIGAAL-EKYDWLKDYWWKALAVDADKYTARAELEPHH 126
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G F+ G + + L + +G Q ++IA+EG+ + + GCT R + LH
Sbjct: 127 GYFLRALPGAKVEVPLQACLYMTREGLAQNVHNIVIAEEGAELHIITGCTVAPRVRSGLH 186
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
V E NA + ++ + NW P + IS
Sbjct: 187 IGVSEFYVKKNARLTFTMIHNWAPEVAVRPRTA-------AIVEENGVFISNYICMKPVK 239
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP+ GE + F S+ ++ ID G ++ AK + VSK I+ G +
Sbjct: 240 TLQAYPTAYCVGENATVRFNSVLLAQEGSNIDVGARVYLRAKGCRAEAVSKAITTGGNIV 299
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
RG A + +C L++ + H IP +E + HEA KI+ E
Sbjct: 300 A-RG--HFIGEAEGVKGHLECRGLILSDRGKIHAIPELEGSVKDLEMTHEAAVGKIAPEE 356
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI-SLEG 486
+ Y + RG+ E A A IV GF+ ++ LP E ++ + EG
Sbjct: 357 IEYLMARGLTGEEATAAIVRGFLDIEMKGLPESINDEIKRALRTGETEG 405
>gi|78048637|ref|YP_364812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325925549|ref|ZP_08186937.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
gi|78037067|emb|CAJ24812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325544053|gb|EGD15448.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
Length = 420
Score = 208 bits (528), Expect = 3e-51, Method: Composition-based stats.
Identities = 81/435 (18%), Positives = 152/435 (34%), Gaps = 38/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DARRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPTLVDAAALD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP + G + ++ + + T L EA ++
Sbjct: 68 DIPSPRLVFVNGRPSEALSDLSTLPEGVQLDTLSASLA-------ASDEA--------QQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLI 233
L D +A LN+A+ +G V + G + + L F E+ R LI
Sbjct: 113 LLGRRFDGSDEVFARLNAALADEGVLVRVQAGAQIELPLHLVFVGVAGEQDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + A + ++ VQ G +
Sbjct: 173 ELRAGAALQVVEHHL-HVGDAAHLANSVMHVHLAQGAALSHARVQ-------AGSAHATS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 225 LL-RTEAVLARDARYQRVDLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEEAQRLLSAAFCHEPLRVLP---- 399
Query: 474 VEAQKLIDISLEGSV 488
++ + L+ ++
Sbjct: 400 AALSAVLALQLDRAL 414
>gi|126462852|ref|YP_001043966.1| SufBD protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104516|gb|ABN77194.1| SufBD protein [Rhodobacter sphaeroides ATCC 17029]
Length = 427
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 83/431 (19%), Positives = 151/431 (35%), Gaps = 44/431 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A R M P R + D + + + + D + + ++L +
Sbjct: 30 RFDALARLTAMGLPK---RRDEYWRYTDPASFNSAEPVPATTFDDGEEGMVFEAIDRLKL 86
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP---DLVK 174
V VD VFD+ + + L + +SEA + DL
Sbjct: 87 ---------------VFVDGVFDAAA-----SDPLALENIEIGLLSEAQSDIHWARDLYG 126
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ +AALN+A T+G + + P ++ + + + I
Sbjct: 127 VLEARGQVPVKRPFAALNTAFATEGVLIRVTGY--VPRPIALIYIHSSDTSDAVLHHCIR 184
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ G+ V+ LE A R V+E+ + + Q G + +
Sbjct: 185 VETGADVTVLENGPAAARFTK-----VMEVDVAEGGRFHHIRAQ----GRDHDRRASTHI 235
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + L +T L G+++ A+ +G D
Sbjct: 236 FAR----VAGKGLFKSFTLTANGVMTRNEAVIELVGDEAVAHVAGAAVGDGKFHHDDTVF 291
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + SR V K + + ++GK+ V GA + + SLL+ + P
Sbjct: 292 VTHEGEACESRQVFKKVLKNGATGVFQGKILVKPGAQKTDGYQISQSLLLDEDSVFLAKP 351
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H +T+ I + LFY RG+P +AA +L+V F+ E +Q++ E
Sbjct: 352 ELEIYADDVKCSHGSTSGAIDETGLFYLRSRGVPLKAAQSLLVLAFLAEAIQEIENE--- 408
Query: 475 EAQKLIDISLE 485
E + I LE
Sbjct: 409 EIAEDIRQRLE 419
>gi|84516297|ref|ZP_01003657.1| FeS assembly protein SufD [Loktanella vestfoldensis SKA53]
gi|84509993|gb|EAQ06450.1| FeS assembly protein SufD [Loktanella vestfoldensis SKA53]
Length = 428
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 146/438 (33%), Gaps = 45/438 (10%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W R A R M P+ R + D + D P L
Sbjct: 26 WATAARSDALARLSAMGLPT---RRDEYWRYTD----------PASLIVADAPPAAL--- 69
Query: 113 EKLGIPIREQEILAGVQT-SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
E + AGV + V VD VFD+ ++L +G+ +++
Sbjct: 70 ----FDNGEAPLFAGVDRIALVFVDGVFDAAQ-----SDDLAGAGIEIHRLADVAQRDIH 120
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSF--VYIPKGVRCPMELSTYFRINEKGTGQFE 229
K T+ G + +A+ T + + I + + + + +
Sbjct: 121 WAKDLYGTLESRGQHPVERPLAALNTAIASDGIVIRATAKVQKPVHLVYLHQSETSDVTL 180
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
L+ + G+ ++ LE R +E+ D + + Q G +
Sbjct: 181 HNLVRIEAGASLTLLETGPGAARLSTC-----LEVDIADAGQFHHIRAQ----GSDHERR 231
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-FQQ 348
+ + S L +T +RG+ + + +G
Sbjct: 232 AVTH----CFAQLAAESVFKSFTLTFNGVLTRNECVIDMRGDDAVAHVAGACVGDGGDFH 287
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D + H A SR V K + + ++GK+ V +GA + + SLL+ ++
Sbjct: 288 HDDTVFVTHDALRGESRQVFKKVLRNGAVGVFQGKILVKQGAQKTDGYQISQSLLLDDDS 347
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H +TT I + LFY RG+P EAA L+ F+ E L ++
Sbjct: 348 QFLAKPELEIYADDVACSHGSTTGAIDETALFYLRSRGVPMEAARNLLTLSFLAEALAEI 407
Query: 469 PMEFAVEAQKLIDISLEG 486
+ E + LEG
Sbjct: 408 EDQALAE---ELQTRLEG 422
>gi|330861450|emb|CBX71673.1| protein sufB [Yersinia enterocolitica W22703]
Length = 270
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 161/257 (62%), Positives = 198/257 (77%), Gaps = 2/257 (0%)
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
+AVDA+FDSVSV TT++ +L + G+IF EAI E+PDLV+KYL +VVP DNF+AALN
Sbjct: 1 MAVDAIFDSVSVATTYRGKLAEQGIIFCSFGEAIQEYPDLVRKYLGSVVPATDNFFAALN 60
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
+AV +DG+FVY+PKGVRCPMELSTYFRIN TGQFERT++IADE SYVSY+EGC+AP R
Sbjct: 61 AAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTILIADEDSYVSYIEGCSAPVR 120
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
D QLHAAVVE++ NAE+KYSTVQNW+ G GGI NFVTKR C G SK+SWTQ
Sbjct: 121 DSYQLHAAVVEVILHKNAEVKYSTVQNWFAGA-DSTGGILNFVTKRALCEGEGSKMSWTQ 179
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT-KMLHLAKNTTSRIVSKGI 371
ETGSAITWKYPS +L+G+ S GEF+S+A++ +M+H+ KNT S I++KGI
Sbjct: 180 SETGSAITWKYPSVILQGDNSIGEFFSVALTQRPSASRYRHLRMIHIGKNTKSTIIAKGI 239
Query: 372 SAGFSNNTYRGKVSVHR 388
SAG S NTYRG V +
Sbjct: 240 SAGHSQNTYRGLVKICP 256
>gi|156934261|ref|YP_001438177.1| cysteine desulfurase activator complex subunit SufD [Cronobacter
sakazakii ATCC BAA-894]
gi|156532515|gb|ABU77341.1| hypothetical protein ESA_02091 [Cronobacter sakazakii ATCC BAA-894]
Length = 424
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 68/415 (16%), Positives = 130/415 (31%), Gaps = 47/415 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L D L +
Sbjct: 33 LQQLLRLGLPT---RKHEDWKYTPL------------------DGLLKHDFVVPVAEALS 71
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+E L+ + A+ VF V + SG
Sbjct: 72 REALSTLALPVDALRLVFIDGHFVPELSDATDNSGFEISVNDS-----------RRGLTT 120
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ + +++ + + L +E T + L
Sbjct: 121 PVQPEAFLHLTESLAQSVTHIHVARNQKPSKALLLMHISAGRAGDEINTVHYRHHL-ELA 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + ++ A + NA++ + + P
Sbjct: 180 EGAQATVIEHY-VSRDEKPHFTGARLTTQVGANAQLNHYKLAFENPVSWHFAHN------ 232
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ + + G+ + S L GE S+A+ + D+ T +
Sbjct: 233 --DLIVSQDAHAASSSYLLGAGVLRHNTSTQLNGENITLRVNSLALPVNNEVCDTRTWLE 290
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + G + V + A + ++LL+G T P +
Sbjct: 291 HNKGYCNSRQLHKTIVRDKGRAVFNGLIKVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQL 350
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
E H AT +I DE +FY RGI E+AA +I+ F E+ + + E
Sbjct: 351 EIYADDVKCSHGATVGRIDDEQMFYLRSRGINEQAAQQMIIYAFAAELTESIHDE 405
>gi|189220480|ref|YP_001941120.1| cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
gi|189187338|gb|ACD84523.1| Cysteine desulfurase activator SufB [Methylacidiphilum infernorum
V4]
Length = 430
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 88/418 (21%), Positives = 157/418 (37%), Gaps = 27/418 (6%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P W R + + + P F + + +
Sbjct: 19 PAWFENSRKQSQLEYERLPHPQRKN---EKWRFSSI---------EKIKWEGYSSSVPVS 66
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
++ I + S A+ D + T E+L+K G+IF P++EA+ +P
Sbjct: 67 PFDVEKISSSFP-----FENSLGALVYGNDELLFYTPIPEKLQKMGIIFSPLNEALALYP 121
Query: 171 DLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
L+K YL + +G AL+ + G F+Y+P+ V +F I E
Sbjct: 122 GLLKDYLFRETLRMGAEKLEALHRSKTQSGVFLYVPRNVEIQEFFEVWFWITEPFAAVHP 181
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
L++ +EGS + +A+ E ++ ++ +VQ+W +
Sbjct: 182 HILLVLEEGSKAKIQLNFRSLNAGGGFSCSAI-ESFLERSSLLEIISVQHWAEEVNSFMF 240
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ G ++ S + G + L G E S ++ Q+
Sbjct: 241 SLT--------DVGQDAQSSSLFINVGGSYNRFEGKTRLSGAGGSAEILSATLAKNTQEF 292
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T +H A TTS ++ K + + + G + V A + + +L++G N
Sbjct: 293 DQRTLQVHTAPYTTSDLLFKNVLFDSAKTIFSGMIDVSPEAQKTDAYQSNKNLILGENAQ 352
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
A+++P +E H ATT I+ E LFY QRGIP+ L GF+ E +Q+
Sbjct: 353 ANSLPGLEIMADDVRCTHGATTGGIAKEELFYSQQRGIPKPVFEKLYTIGFLAECIQR 410
>gi|238782566|ref|ZP_04626597.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
gi|238716493|gb|EEQ08474.1| hypothetical protein yberc0001_22160 [Yersinia bercovieri ATCC
43970]
Length = 428
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 69/438 (15%), Positives = 129/438 (29%), Gaps = 62/438 (14%)
Query: 62 YRRWLTMKDP-----SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
+++ L + P W + D + +AP +
Sbjct: 38 WQQVLELGFPSIKHEDWKYTPLERLLAHDFSFASAPAVTAAQR----------------- 80
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ L V +D + + +P+ AI
Sbjct: 81 ----DALSLVQDAHRLVFIDGRYAPELSDSDCGPYQLTHLTQSVPLPAAIRP-------- 128
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTL 232
+ L ++ + + +P G + L + G+ R
Sbjct: 129 ---------EIFLHLTESLAQESLHIRLPAGQQSDRPLYLLHISSGSGSEVVNTSHYRHH 179
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ + + +E + A + + DNAE+ + + P
Sbjct: 180 LSVETTAQAEVIEHF-VSLNPQPHFTGARLTISLGDNAELSHYKLAFETPQSYHFAHN-- 236
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
++ G+ +T S L GE + S+ + G + D+
Sbjct: 237 ------DLVLSRDARARSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTR 290
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H SR + K I + G + V + A + ++LL+ T
Sbjct: 291 TYLEHNKGYCESRQLHKTIVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDT 350
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME- 471
P +E H AT +I E LFY RGI + A +I+ F E+ + + E
Sbjct: 351 KPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAIHSET 410
Query: 472 -----FAVEAQKLIDISL 484
A A +L SL
Sbjct: 411 IRKVVLARIADRLAGESL 428
>gi|304315279|ref|YP_003850426.1| ABC-type transport system, permease component [Methanothermobacter
marburgensis str. Marburg]
gi|302588738|gb|ADL59113.1| predicted ABC-type transport system, permease component
[Methanothermobacter marburgensis str. Marburg]
Length = 410
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 92/413 (22%), Positives = 164/413 (39%), Gaps = 29/413 (7%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
ID + A +V E+ T ++G+ E+E
Sbjct: 21 EDIDLERFIREEA-GEHEEVTRAKEVPKEVQETLLRVGVDPEERER--------AGTFIQ 71
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT- 197
D + TT E + M ++ A+ ++ L K Y+ V V + Y +A+
Sbjct: 72 VDQSGICTTCASES----IEIMGMNVALDKYSWL-KDYMWKAVAVDTDKYT-ATTALREA 125
Query: 198 ----DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
G F+ G R L I ++ Q ++IA+E S + + GC +
Sbjct: 126 EGEMGGYFIRSKPGAREVFPLQACMFIGDERVMQTAHNIVIAEENSELHIITGCATGEDV 185
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH V E A+I ++ V NW + I+ L
Sbjct: 186 SSALHVGVSEFYLKPGAKITFTMVHNWAEQVEVRPRTG-------IMVGDNATYINNYIL 238
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
+ YP+ GE S F SI +D G++++ K +++ +VS+ +S
Sbjct: 239 TSPVKSIQSYPTAYCSGENSRVVFQSILGGQKDSVLDVGSRVILEGKGSSAEMVSRAVSK 298
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S RG + + +C L++ ++ + +P +E + + HEA K
Sbjct: 299 DSSQIYSRG--HLAGRVPEVKGHLECHGLVLSDDSMIYAVPELEGSATDLEMSHEAAVGK 356
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
I++E + Y RG+ EE A ++IV GF+ + LP E A E ++++D+SL+G
Sbjct: 357 IAEEEVMYLTSRGLTEEEAASMIVRGFLSMDITGLPPELAAETKRMLDMSLKG 409
>gi|317047893|ref|YP_004115541.1| FeS assembly protein SufD [Pantoea sp. At-9b]
gi|316949510|gb|ADU68985.1| FeS assembly protein SufD [Pantoea sp. At-9b]
Length = 425
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 75/416 (18%), Positives = 139/416 (33%), Gaps = 46/416 (11%)
Query: 59 LLAYRRWL---TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
L A + W + P+ ++ + L G V P+ +
Sbjct: 28 LQAQQHWQQLMRLGLPT---RKHENWKYTPL---------EGLLGQQFVLPQPQD----V 71
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
E L V VD F + +G+ + S+A P
Sbjct: 72 TAEQVEALALPIETVRLVFVDGRFQPAL-------SSRDTGLFEIQHSQAAERRP----- 119
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ---FERTL 232
P+ + L ++ + + + + +G + L + + G R
Sbjct: 120 ---LPAPIQPEVFLHLTESLAEEATSIRLARGKAAALPLYLLHITSGQDAGMNTVHHRHH 176
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ + + +E A DNA++ + + S Y
Sbjct: 177 LQLEASAEAEVIEHYVTLND-VAHFTGARFTFDVADNAKLSHIKL-------SFESDKSY 228
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+F G +++S T G+ ++ S L GE + S+A+ + D+
Sbjct: 229 HFAHN-DVVIGRDAQVSTTSFLLGAGLSRHNTSAQLNGENTNLAMNSLALPINQEVCDTR 287
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ + H + SR + K I + G + V + A + ++LL+G T
Sbjct: 288 SYLEHNKGHCMSRQMHKTIVRDKGRAVFNGMIKVAQHALKTDGQMTNNNLLMGRLAEVDT 347
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H AT +I DE +FY RGI E AA +I++ F E+ + L
Sbjct: 348 KPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIEESAAQRMIIHAFAAELTETL 403
>gi|73668612|ref|YP_304627.1| hypothetical protein Mbar_A1079 [Methanosarcina barkeri str.
Fusaro]
gi|72395774|gb|AAZ70047.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 407
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 85/405 (20%), Positives = 165/405 (40%), Gaps = 28/405 (6%)
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
F++ + P + L +D E +T ++G+ E+ + AV
Sbjct: 24 EDLELERFEEGSKISRP-----IEDLQTLDEESKKTLLQVGVVPSEEGRSGSLIVLDNAV 78
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
LK+ V M +A+ E + +K Y +V V + Y A
Sbjct: 79 S------------HSSLKEKNVELMSTQKAL-EKYEWLKDYSWKLVSVDTDKYTAKTYLE 125
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
DG F+ +P G + + + T + + Q ++I +EG+ + + GCTA + E
Sbjct: 126 NADGYFIRVPAGKKSSLPVQTCLLLGKDKVFQTVHNIVIVEEGASLDIITGCTAKKGVEE 185
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
LH + E+ A + ++ + NW + + +S
Sbjct: 186 GLHLGISEMYVKKGATLNFTMIHNWAEQIGVRPRTV-------IKVEEGGTYVSNYICLK 238
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
YP+ L GE + +IAI++ ++D G++ + A T + ++S+ I+ G
Sbjct: 239 PVHSVQTYPTVKLEGEGAVTRLNTIAIAHSGSELDLGSRAIFNAPGTKAELISRTITIGG 298
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
RG++ + ++ +C L++ + IP +E+ L HEA KI+
Sbjct: 299 -RVIARGEMIGNEK--GAKGHLECKGLVLSDKGSQLAIPILEANVDDVELTHEAAVGKIA 355
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ + Y + RG+ E+ A+ +IV GF+ ++ +P E E + I
Sbjct: 356 KDQVEYLMARGLTEDEAVGMIVRGFLDVGIRGIPEELKKEIENTI 400
>gi|261855794|ref|YP_003263077.1| FeS assembly protein SufD [Halothiobacillus neapolitanus c2]
gi|261836263|gb|ACX96030.1| FeS assembly protein SufD [Halothiobacillus neapolitanus c2]
Length = 426
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 59/332 (17%), Positives = 125/332 (37%), Gaps = 13/332 (3%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
G+ P+ +A + + + ++ ALN+A +G + I +
Sbjct: 102 DGMTVTPLQDADHAQR---RAAFAPLAQNPNDALLALNTATAAEGLVIDIAPNADISQPI 158
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
F T R L+ + S + +E + +V+ N+++ +
Sbjct: 159 VIEFVDEPTDTAAQTRILLRSGVHSRATLIE-TASSGDGVVFWRNSVLVAELAANSQLTH 217
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
++ G + ++ ++ G + + + +
Sbjct: 218 LSL--------GLDGDARLLTDRSFVTLARDARYQSINIQLGGQLVRRDIDVNITETGAH 269
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + + Q +D+ T+++H A +TTS + I+ ++G++ V + A
Sbjct: 270 CDLIGLMMPRAKQVLDTHTRLIHGAAHTTSNEQYQIIADESGRGIFKGRILVAQDAQKIE 329
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
F +LL+ ++ T P +E H AT ++ DE L+Y RGI E A
Sbjct: 330 AFQNSRNLLLSDSAEIDTKPELEIYADDVKCSHGATIGRLDDEALYYLKSRGISSENARK 389
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
L++ GF +E++ +LP E ++I LE
Sbjct: 390 LLITGFAQEIVDQLPTPELVDWLGQIIARRLE 421
>gi|222086101|ref|YP_002544633.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
gi|221723549|gb|ACM26705.1| FeS assembly protein SufD [Agrobacterium radiobacter K84]
Length = 424
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 146/431 (33%), Gaps = 53/431 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
RL T P+ R+ A + D D+ +
Sbjct: 39 RL--LDDLKTAGLPT---RRFEAWHYTDFKNLLR-------TVPTDLGTGSVEPLSPTAE 86
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+L G K +VD + S + + + +G+ + +AI
Sbjct: 87 GSAVLSVLQGRAVGKASVDGLIVSRYI-DSLTDGTAAAGLEALGRDDAI----------- 134
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+N++ DG + P G L F R +
Sbjct: 135 -----------GRINASFVRDGYVIEFPDGTELDAPLEIQFIHAGGQI--HSRLPVTFGV 181
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + +E L +++ ++ AE+ + +Q D+ +
Sbjct: 182 GAKATVIERHEGVPGAAA-LVSSISDITVGKGAEVTWIILQEQGSEDTHLG--------Q 232
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G +K+ + G + + + GE + + + G D + H
Sbjct: 233 IRVDLGQDAKLKLFVINAGGKLVRQELHIKVSGEGAELSLRGVNLLGGDTHTDVTMVLGH 292
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+T+S + + + + ++G + V A + C++LL+ ++ P +E
Sbjct: 293 DVPHTSSTEIVRNVVFDRARGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELE 352
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT + I HL+Y + RGIP+ A A++VN FV E++++L E VEA
Sbjct: 353 IFADDVQCGHGATVADIDSNHLYYLMARGIPKNKARAMLVNAFVAEIVEELEDEALVEA- 411
Query: 478 KLIDISLEGSV 488
LEG +
Sbjct: 412 ------LEGVI 416
>gi|238791666|ref|ZP_04635303.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
gi|238728770|gb|EEQ20287.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
Length = 428
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 95/284 (33%), Gaps = 15/284 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + + +P G L + T + L+I + + +
Sbjct: 133 HLTESLAQESLHIRLPVGKHSEKPLYLLHISSGNDSDVVNTSHYRHHLVI-EANAQAEVI 191
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + + DNAE+ + + P
Sbjct: 192 EHF-VSLNQQPHFTGARLTIAVGDNAELHHCKLAFEAPQSYHFAHN--------DLLLSR 242
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
S+ G+ +T S L GE + S+ + G + D+ + + H S
Sbjct: 243 DSRARSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTRSYLEHNKGYCES 302
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + G + V + A + ++LL+ T P +E
Sbjct: 303 RQLHKTIVRERGKAIFNGMIKVAKHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 362
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I E LFY RGI + A +I+ F E+ + +
Sbjct: 363 CSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAI 406
>gi|256061034|ref|ZP_05451190.1| FeS assembly protein SufD [Brucella neotomae 5K33]
gi|261325033|ref|ZP_05964230.1| FeS assembly protein SufD [Brucella neotomae 5K33]
gi|261301013|gb|EEY04510.1| FeS assembly protein SufD [Brucella neotomae 5K33]
Length = 425
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 76/429 (17%), Positives = 144/429 (33%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L+ + I
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPALIA--DSSII 94
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
LA GV P+ EA+ + + +
Sbjct: 95 AASNGVALAAKAPK------------------------GVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|51596635|ref|YP_070826.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis IP 32953]
gi|186895691|ref|YP_001872803.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis PB1/+]
gi|51589917|emb|CAH21549.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|186698717|gb|ACC89346.1| FeS assembly protein SufD [Yersinia pseudotuberculosis PB1/+]
Length = 441
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 99/289 (34%), Gaps = 13/289 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTLIIADEGSYVSYLE 245
L ++ + + +P G L + + R ++ + + +E
Sbjct: 146 HLTESLAQERLHIRLPVGQHSDKPLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIE 205
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
++ A + + DNAE+ + + P G
Sbjct: 206 HF-VSLDEQPHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHN--------DLVLGRD 256
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
++ G+ +T S L GE S S+ + G + D+ T + H + SR
Sbjct: 257 ARARSHSFLLGAGLTRHNTSSQLNGEGSSLSMNSLLLPVGREICDTRTYLEHNKGHCESR 316
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K + + G + V + A + ++LL+ + T P +E
Sbjct: 317 QLHKVMVRERGKAIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKC 376
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
H AT +I E LFY RGI + A +I+ F EV + + E
Sbjct: 377 SHGATVGRIDPEQLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIR 425
>gi|238753645|ref|ZP_04615007.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
gi|238708197|gb|EEQ00553.1| hypothetical protein yruck0001_13760 [Yersinia ruckeri ATCC 29473]
Length = 410
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 56/313 (17%), Positives = 110/313 (35%), Gaps = 17/313 (5%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIAD 236
PV + L ++ + + + + G L + T + L+ +
Sbjct: 107 PVQSEVFLHLTESLAQEVTLIRLAAGQHGNKPLYLLHISSGDAGEVVNTSHYRHHLV-LE 165
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ +E + A + + DNA++ + + P
Sbjct: 166 ANTQADVVEHYVSLND-LPHFTGARLTVSVGDNAQLTHCKLAFETPQSDHFAHN------ 218
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G ++ S T G+ +T + S L GE + S+ + G + D+ T +
Sbjct: 219 --DIVMGRDARASSTSFLLGAGLTRHHTSTQLNGEGATLSINSLLLPVGREVCDTRTYLE 276
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K + + G + V + A + ++LL+ T P +
Sbjct: 277 HNKGYCQSRQLHKTVVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTRPQL 336
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H AT +I E LFY RGI + A +I+ F E+ + + +
Sbjct: 337 EIYADDVKCSHGATVGRIDAEQLFYLQSRGISQADAQQMIIFAFAAELTEAIGNDIIR-- 394
Query: 477 QKLIDISLEGSVG 489
Q++++ + VG
Sbjct: 395 QRVMERIADRLVG 407
>gi|256825169|ref|YP_003149129.1| Iron-regulated ABC transporter permease protein SufD [Kytococcus
sedentarius DSM 20547]
gi|256688562|gb|ACV06364.1| Iron-regulated ABC transporter permease protein SufD [Kytococcus
sedentarius DSM 20547]
Length = 429
Score = 207 bits (526), Expect = 5e-51, Method: Composition-based stats.
Identities = 58/307 (18%), Positives = 111/307 (36%), Gaps = 16/307 (5%)
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
V V ++ A + SA + V IP L + G +I A S
Sbjct: 113 VLVPEDRAAVVASAGCEEALHVQIPADTELDEPLVVRVTGHGAGRRSNAHVVIEAGTHSR 172
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+ T H VE++A D +++ ++Q W +
Sbjct: 173 ALVILQHTGSAE-----HGENVEILAGDGSQLTVVSLQEWQDDAVHTG--------QHEA 219
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
G + + G + + G + + ++ Q + + H A
Sbjct: 220 RIGRDATFRHIVVTLGGDLVRLNTNVSYDGPGGSANLFGVYFADAGQHQEHRVFVDHNAP 279
Query: 361 NTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
S ++ KG G + + G V + A + + +L++ + A ++P +E +
Sbjct: 280 KCHSDVLYKGALQGETARTVWVGDVLIRAEAEGTDTYEMNRNLVLTDGARADSVPNLEIE 339
Query: 420 NSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQ 477
H + T + DE LFY + RGIPE A L+V GF +++ ++ + E
Sbjct: 340 TGEIEGAGHASATGRFDDEQLFYLMARGIPESEARRLVVRGFFADIVGRIGVPEVTDRIM 399
Query: 478 KLIDISL 484
+ I++ L
Sbjct: 400 RAIEVEL 406
>gi|253989390|ref|YP_003040746.1| cysteine desulfurase activator complex subunit SufD [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780840|emb|CAQ84002.1| SUF system FeS cluster assembly [Photorhabdus asymbiotica]
Length = 437
Score = 206 bits (525), Expect = 6e-51, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 102/304 (33%), Gaps = 12/304 (3%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG----TGQ 227
L+ P+ + L ++ + + G L +
Sbjct: 123 LLDNKSELPAPIQSEIFLHLTESLAQQPLIITLKAGQIAEKPLYLLNMTSGYSDEILNSS 182
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R I + +E + + + + + DNA + + +
Sbjct: 183 HYRYHISVGANASAKVIEHFVSIGEQQPHMTGGRLTVEVGDNASLTHIKL-------GVE 235
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
Y+F G +++ T G+A+ S L E + S+ + G +
Sbjct: 236 NNKSYHFAHN-DIVIGRDARVKSTSFLLGAALGRHNTSVQLNSEGANLSLNSLLLPQGTE 294
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D+ T + H SR + K I S + G + V A + ++LL+G
Sbjct: 295 VADTRTYLEHNKGYCESRQLHKTIVMDQSKAVFNGMIKVASHALKTDGQMTNNNLLLGKQ 354
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H AT +I++E LFY RGI + A +IV F E+ +
Sbjct: 355 AEVDTKPQLEIYADDVKCSHGATVGRINEEQLFYLQSRGINQREAQQMIVFAFAAELTEF 414
Query: 468 LPME 471
+ E
Sbjct: 415 IEDE 418
>gi|294664774|ref|ZP_06730100.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292605461|gb|EFF48786.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 420
Score = 206 bits (525), Expect = 6e-51, Method: Composition-based stats.
Identities = 80/435 (18%), Positives = 153/435 (35%), Gaps = 38/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DARRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPTLVDAAALD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP ++ G + ++ + + T L SG ++
Sbjct: 68 DIPSPRLVLVNGRPSEALSDLSTLPEGVQLDTLSASLAASG---------------QAQQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLI 233
L D +A LN+A+ +G + + G + + L F E+ R LI
Sbjct: 113 LLGRRFDGSDEVFARLNAALADEGVLIRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + A + ++ VQ G +
Sbjct: 173 ELRAGAALQVIEHHL-HVGDAAHLENSVMHVHLAQGAALSHARVQ-------AGSAHATS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 225 LL-RTDAVLARDARYQRVDLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLP---- 399
Query: 474 VEAQKLIDISLEGSV 488
++ + L+ ++
Sbjct: 400 AALSAVLALQLDRAL 414
>gi|296136902|ref|YP_003644144.1| FeS assembly protein SufD [Thiomonas intermedia K12]
gi|295797024|gb|ADG31814.1| FeS assembly protein SufD [Thiomonas intermedia K12]
Length = 439
Score = 206 bits (525), Expect = 6e-51, Method: Composition-based stats.
Identities = 90/426 (21%), Positives = 143/426 (33%), Gaps = 41/426 (9%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDV 104
EP + + R A L P+ W A+D DL AP + +
Sbjct: 21 EPARVAQARRQALEALLRSGLPTRHSEDWKYTSLRALDAMDLAV-TAPSAR--------L 71
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
+ E LR L L G V VD FD+ + GV P
Sbjct: 72 NEEALRAAGAL---------LVGDAPRLVFVDGAFDAELS----RLNDLPPGVSLAPWG- 117
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A + G F A +N DG + + GV + G
Sbjct: 118 ARQSPSATGAGTVLDAAAPGGAFDA-INRMFARDGMALELGAGVCLDAPIVVVMVQTRAG 176
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
L +GS +E + L ++V A++++ +Q+
Sbjct: 177 ASHVRHAL-RLGQGSSARVIEQHLGLAQVGPYLASSVTRAELARGAKLQHVRLQDESDAA 235
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
V++ +G S++ L GS ++ + + +++
Sbjct: 236 VH--------VSQLHAAQGEDSQLDAQILVLGSRLSRQEFHIAHAAPGCHTDLRGVSVLA 287
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G Q D + H TSR V +G+ ++ + G+V+VH GA + +LL+
Sbjct: 288 GEQHGDVHMGIDHRHPRGTSRTVVRGVFDDAAHGVFTGRVNVHPGAQKTDAGMINRNLLL 347
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
A T P ++ H AT ++ E LFY RGI A AL+V F V
Sbjct: 348 SPRAEADTRPQLQIDADDVLCSHGATVGQLDAEALFYLQSRGIAAPLARALLVQAF---V 404
Query: 465 LQKLPM 470
Q LP
Sbjct: 405 AQALPD 410
>gi|296445838|ref|ZP_06887790.1| FeS assembly protein SufD [Methylosinus trichosporium OB3b]
gi|296256666|gb|EFH03741.1| FeS assembly protein SufD [Methylosinus trichosporium OB3b]
Length = 434
Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats.
Identities = 82/432 (18%), Positives = 148/432 (34%), Gaps = 38/432 (8%)
Query: 46 AKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
K P R ++ + P+ R A + DL + +G V
Sbjct: 24 KSKGAPA----LRQASWEFFARKGLPT---RRVEAWHYTDLRAALRAVAPLGAPETVAVP 76
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
+ + L+ V V+ V + ++ L G+ ++A
Sbjct: 77 AAAEGRVRLVVADGAFRPDLSNVAALPAGVEFVSLADALAKDDAAVLAALGLPENAGADA 136
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
I ALN+A+ DG + I + + +
Sbjct: 137 I----------------------VALNAALMQDGVVLRIAPAIEVAKTIEILLLSSGDTA 174
Query: 226 -GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
F R+L+I +G+ +E A Q V+ AE+++ + + P
Sbjct: 175 RSAFTRSLVIVGDGAKAKIIETSLALAPSGAQE-NHVLAFSIGAGAEVEHIS--DIGPQS 231
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
VT + ++ G + + L GE++ +A+
Sbjct: 232 EAAIRLFSLMVTAQT-----KASFKSLGYIEGGGLVRRQIFARLAGEEASLSLDGVALLG 286
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G D+ + H A + SR + + G S ++GKV V GA + Q +LL+
Sbjct: 287 GKDHADTTLVVEHAAAHCQSRERFRNVLDGQSTGVFQGKVVVRPGAQKTDGSMQSRALLL 346
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
N + P +E H AT +++ + LFY RG+P+ A AL++ GF E+
Sbjct: 347 SENATMNNKPELEIFADDVVCGHGATCGRLNADQLFYLEARGLPKREAEALLIEGFAGEI 406
Query: 465 LQKLPMEFAVEA 476
+ + E EA
Sbjct: 407 VDAVSEEATREA 418
>gi|302561292|ref|ZP_07313634.1| FeS assembly protein SufD [Streptomyces griseoflavus Tu4000]
gi|302478910|gb|EFL42003.1| FeS assembly protein SufD [Streptomyces griseoflavus Tu4000]
Length = 396
Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats.
Identities = 64/318 (20%), Positives = 118/318 (37%), Gaps = 19/318 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
L D A SA S V +PK + ++ +G F +I
Sbjct: 94 DARLGRAGMPADRVAAQAYSAF-ERASVVTVPKETVLTEPIRI--AVHGEGGTAFGHQVI 150
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + + AA VE V D A++ +VQ+W
Sbjct: 151 ELGAFAEALVV-----IDHTGDAVLAANVEYVLGDGAKLTVVSVQDWDDKAVH------- 198
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V + G + + G + +P + G E + + ++ Q +
Sbjct: 199 -VGQHNALVGRDASFKSVVVTFGGDVVRLHPRVVYAGPGGEAELFGLYFTDRGQHQEHRL 257
Query: 354 KMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H + S +V KG ++ + G V + A + + +L++ + +
Sbjct: 258 LVDHNVPHCKSNVVYKGALQGDDAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVDS 317
Query: 413 IPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY + RGIPE+ A L+V GF E++Q++ +
Sbjct: 318 VPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEKDARRLVVRGFFAELVQQIGVP 377
Query: 472 FAVE-AQKLIDISLEGSV 488
E I+ LE +V
Sbjct: 378 DIEERLIAKIEEELEAAV 395
>gi|238749442|ref|ZP_04610947.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
gi|238712097|gb|EEQ04310.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
Length = 407
Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats.
Identities = 79/450 (17%), Positives = 133/450 (29%), Gaps = 62/450 (13%)
Query: 54 MLEWRLLAY-----RRWL---TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD 105
M + R + W + PS I++ + L A ++
Sbjct: 1 MFKQRQSSLGAGTSAHWQQVLELGFPS---IKHEDWKYTPLERLLAHNFSFADTAVVTAA 57
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
R+Q L V +D + PI A
Sbjct: 58 Q-------------RDQLSLVQDAHRLVFIDGRYAPELSDNECGPYQLTPLTENTPIPAA 104
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-- 223
I + L ++ + + +P G L + K
Sbjct: 105 IQ-----------------SEVFLHLTESLAQEALHIRLPAGKHSDKPLYLLHISSGKGT 147
Query: 224 ---GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
T + L I + G+ +E + E A + L DNAE+ + +
Sbjct: 148 EVVNTSHYRHHLAI-ESGAQAEVIEHFVSLND-EAHFTGARLTLAVGDNAELNHCKLAFE 205
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
P ++ G+ +T S L GE + S+
Sbjct: 206 TPHSYHFAHN--------DLVLSRDARARSYSFLLGAGLTRHNTSAQLNGEGATLSINSL 257
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
+ G + D+ T + H SR + K I + G + V + A + +
Sbjct: 258 LLPVGREICDTRTYLEHNKGYCESRQLHKTIVRERGKAIFNGMIKVAQHALKTDGQMTNN 317
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
+LL+ T P +E H AT +I E LFY RGI + A +I+ F
Sbjct: 318 NLLLSKLAEIDTKPQLEIYADDVKCSHGATVGRIDAEQLFYLQSRGISQPDAQQMIIFAF 377
Query: 461 VREVLQKLPME------FAVEAQKLIDISL 484
E+ + + E A A +L SL
Sbjct: 378 AAELTEAIHHENIRKVILARIADRLAQESL 407
>gi|170024089|ref|YP_001720594.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis YPIII]
gi|169750623|gb|ACA68141.1| FeS assembly protein SufD [Yersinia pseudotuberculosis YPIII]
Length = 441
Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 99/289 (34%), Gaps = 13/289 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTLIIADEGSYVSYLE 245
L ++ + + +P G L + + R ++ + + +E
Sbjct: 146 HLTESLAQERLHIRLPVGQHSDKPLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIE 205
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
++ A + + DNAE+ + + P G
Sbjct: 206 HF-VSLNEQPHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHN--------DLVLGRD 256
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
++ G+ +T S L GE S S+ + G + D+ T + H + SR
Sbjct: 257 ARARSHSFLLGAGLTRHNTSSQLNGEGSSLSMNSLLLPVGREICDTRTYLEHNKGHCESR 316
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K + + G + V + A + ++LL+ + T P +E
Sbjct: 317 QLHKVMVRERGKAIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKC 376
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
H AT +I E LFY RGI + A +I+ F EV + + E
Sbjct: 377 SHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIR 425
>gi|225427242|ref|XP_002278544.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 495
Score = 206 bits (524), Expect = 8e-51, Method: Composition-based stats.
Identities = 85/411 (20%), Positives = 155/411 (37%), Gaps = 24/411 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
+ P + D L+R Y ++ +A ++ ++ D V +
Sbjct: 95 STPWPSRKDEPFRFTDTSLIR-YSQVTPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSN 153
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
+GV +S E + KK V + + +LN D + VY+P G R
Sbjct: 154 LSQLPTGVFVGSLSSLPSET--ITKKVSEFVANFEGDLFWSLNGLGTPDMAVVYVPAGCR 211
Query: 210 CPMELSTYFRINEKGT-------GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
M L + E G R ++ +EG + +E ++ V
Sbjct: 212 VEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVT 271
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
E+V + A++K+S +Q+ + K +G S ++ TG ++
Sbjct: 272 EVVIGEGAKVKHSYIQSQSLSAAHIKWT--------SVQQGSSSSYELIEVSTGGKLSRH 323
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-SNNTYR 381
+ G + E + +S G Q D ++++ SR + K I A +
Sbjct: 324 NVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAVFD 383
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + V+R A + SLL+ + P ++ H A S + + LFY
Sbjct: 384 GNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFY 443
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLP---MEFAVE--AQKLIDISLEGS 487
L RGI E A ++ F EV+++LP + VE + L++ +L+GS
Sbjct: 444 FLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPTLKGS 494
>gi|297742116|emb|CBI33903.3| unnamed protein product [Vitis vinifera]
Length = 480
Score = 206 bits (524), Expect = 8e-51, Method: Composition-based stats.
Identities = 85/411 (20%), Positives = 155/411 (37%), Gaps = 24/411 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
+ P + D L+R Y ++ +A ++ ++ D V +
Sbjct: 80 STPWPSRKDEPFRFTDTSLIR-YSQVTPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSN 138
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
+GV +S E + KK V + + +LN D + VY+P G R
Sbjct: 139 LSQLPTGVFVGSLSSLPSET--ITKKVSEFVANFEGDLFWSLNGLGTPDMAVVYVPAGCR 196
Query: 210 CPMELSTYFRINEKGT-------GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
M L + E G R ++ +EG + +E ++ V
Sbjct: 197 VEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVT 256
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
E+V + A++K+S +Q+ + K +G S ++ TG ++
Sbjct: 257 EVVIGEGAKVKHSYIQSQSLSAAHIKWT--------SVQQGSSSSYELIEVSTGGKLSRH 308
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-SNNTYR 381
+ G + E + +S G Q D ++++ SR + K I A +
Sbjct: 309 NVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAVFD 368
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + V+R A + SLL+ + P ++ H A S + + LFY
Sbjct: 369 GNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFY 428
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLP---MEFAVE--AQKLIDISLEGS 487
L RGI E A ++ F EV+++LP + VE + L++ +L+GS
Sbjct: 429 FLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPTLKGS 479
>gi|256829589|ref|YP_003158317.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
gi|256578765|gb|ACU89901.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
Length = 393
Score = 206 bits (524), Expect = 8e-51, Method: Composition-based stats.
Identities = 84/373 (22%), Positives = 147/373 (39%), Gaps = 11/373 (2%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
L + L + + + GV A +T + GV + I +A+ +
Sbjct: 24 LPDFSTLSEESKRELRMVGVDVDAAGERAGTFLQFDHSTVHCKSAGKGVEVLGIRQALKK 83
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+ L + + + P D+F A G F+ KGV+ + T I + GQ
Sbjct: 84 YDGLPEYFWKAMDPEKDDFTRAAAREELHGGYFIRTEKGVKVAEPVQTCLFIKGQNVGQN 143
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+++ +E S V + GC + LH + E ++ ++ V NW
Sbjct: 144 VHNIVVVEEDSEVHIVTGCATSHDVTSALHLGISEFYIKKGGKLTFTMVHNWGEDVMVRP 203
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ G + L YP+ L GE + F S+ ++
Sbjct: 204 RTV-------GIVEERGVLQNNYVLLKKVKSVQSYPTIYLNGEGAVARFNSVIVTPTGSH 256
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+G +++ A NT I+S+ I+ G + RG+ + A +R +C L++G
Sbjct: 257 VDTGNRIVLNAPNTRGEIISRTITTGGTIVA-RGE--IIGNAVPARGHLECKGLILG-GG 312
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H IP ++ + L HEA KI+ E + Y + RG+ E+ A + IV GF+ + L
Sbjct: 313 LIHAIPELQGCVTGVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFLNVEIMGL 372
Query: 469 PMEFAVEAQKLID 481
P E K I
Sbjct: 373 PQELRESIDKTIA 385
>gi|15679161|ref|NP_276278.1| ABC transporter subunit Ycf24 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|6686149|sp|O27218|Y1150_METTH RecName: Full=UPF0051 protein MTH_1150
gi|2622255|gb|AAB85639.1| ABC transporter subunit Ycf24 [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 410
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 91/413 (22%), Positives = 163/413 (39%), Gaps = 29/413 (7%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
ID + A +V E+ T ++G+ E+E
Sbjct: 21 EDIDLEKFIKEEA-GEHEEVTRAKEVPKEVQETLLRVGVDPEERER--------AGTFIQ 71
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT- 197
D + TT E + M ++ A+ ++ L K Y+ V V + Y +A+
Sbjct: 72 VDQSGICTTCASES----IEIMGMNVALDKYSWL-KDYMWKAVAVDTDKYT-ATTALREA 125
Query: 198 ----DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
G F+ G R L I ++ Q ++IA+E S + + GC +
Sbjct: 126 EGEMGGYFIRSKPGAREVFPLQACMFIGDERVMQTAHNIVIAEENSELHIITGCATGEDV 185
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH V E A I ++ V NW + I+ L
Sbjct: 186 SSALHVGVSEFYLKKGARITFTMVHNWAEQVEVRPRTG-------IMVGDDATYINNYIL 238
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
+ YP+ GE S F SI +D G++++ + +++ +VS+ +S
Sbjct: 239 TSPVKSIQSYPTAYCTGENSRVVFQSILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSK 298
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S RG + + +C L++ ++ + +P +E + + HEA K
Sbjct: 299 DSSQIYSRG--HLAGRVPEVKGHLECHGLVLSDDSMIYAVPELEGSATELEMSHEAAVGK 356
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
I++E + Y RG+ EE A ++IV GF+ + LP E A E ++++D+SL+G
Sbjct: 357 IAEEEVMYLTSRGLTEEEAASMIVRGFLSMDITGLPPELAAETKRMLDMSLKG 409
>gi|22299448|ref|NP_682695.1| hypothetical protein tlr1905 [Thermosynechococcus elongatus BP-1]
gi|22295631|dbj|BAC09457.1| tlr1905 [Thermosynechococcus elongatus BP-1]
Length = 432
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 77/434 (17%), Positives = 152/434 (35%), Gaps = 45/434 (10%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A R P+ F DL ++PE++ + L
Sbjct: 41 LRQTARDRLHEQTLPTPRDED---WRFTDLSVLRTRTFQPPIAP---LNPEIVAEVQHL- 93
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ E+ V +D F + +GV +L+
Sbjct: 94 --LCERSFP--TVAQIVLIDGYFCGEL------SRVDAAGV-------------ELLPPS 130
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-ERTLIIA 235
L + P ++ LN+A+ + + + R + +F + + R +
Sbjct: 131 LPAIAPPE--VFSDLNAAMLAERLCLRLSGHFR--EPVEVFFVSSRQQQSVVSPRLTVEV 186
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
V+ +E + D+ Q V E+ A + + +Q+ P
Sbjct: 187 AAHGQVTLIERFLSLTGDQ-QFTNTVTEISLGAAAGLHHVRIQHQSPTAIHIGSTA---- 241
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
C+ S ++ G ++ + ++G S +AI+ Q +D+ + +
Sbjct: 242 ----VCQAQDSAYEGHAIDLGGCLSRHHWQVQIQGSGSQTILKGLAIAMDEQIVDTHSAV 297
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
L A ++ S + K I ++ + G+V V + A + +LL+ + T P
Sbjct: 298 LFHAPHSRSEQIHKCILGDRAHGIFNGRVVVPQVAQLTDASQLNRTLLLSDKARVDTKPQ 357
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E + H AT S+++ E +FY RG+ + A L+V F E L + E
Sbjct: 358 LEIVADNVKCSHGATVSQLAAEDIFYLRSRGLDQHQARDLLVKAFALEQLSDITPEPLRE 417
Query: 475 EAQKLIDISLEGSV 488
E ++ + L GS+
Sbjct: 418 EIEEALLAKLGGSL 431
>gi|148558883|ref|YP_001258906.1| FeS assembly protein SufD [Brucella ovis ATCC 25840]
gi|148370140|gb|ABQ60119.1| FeS assembly protein SufD [Brucella ovis ATCC 25840]
Length = 425
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 79/429 (18%), Positives = 147/429 (34%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + V P L
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQVLPAL--------- 87
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
I I+A +A A GV P+ EA+ + + +
Sbjct: 88 -IAGSSIIAASNGVALAAKAP----------------KGVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|21243664|ref|NP_643246.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
gi|21109242|gb|AAM37782.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
Length = 420
Score = 206 bits (523), Expect = 9e-51, Method: Composition-based stats.
Identities = 79/416 (18%), Positives = 145/416 (34%), Gaps = 34/416 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DARRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPTLVDAAALD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP ++ G + ++ + + T L D ++
Sbjct: 68 DIPSPRLVLVNGRPSEALSDLSTLPEGVQLDTLSASLAA---------------SDQAQQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLI 233
L D +A LN+A+ +G V + G + + L F E+ R LI
Sbjct: 113 LLGRRFDGSDEVFARLNAALADEGVLVRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + A + ++ VQ G +
Sbjct: 173 ELRAGAALQVIEHHL-HVGDAAHLENSVMHVHLAQGAALSHARVQ-------AGSAHATS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 225 LL-RTDAVLARDARYQRVDLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLP 399
>gi|170768723|ref|ZP_02903176.1| FeS assembly protein SufD [Escherichia albertii TW07627]
gi|170122271|gb|EDS91202.1| FeS assembly protein SufD [Escherichia albertii TW07627]
Length = 423
Score = 206 bits (523), Expect = 9e-51, Method: Composition-based stats.
Identities = 57/294 (19%), Positives = 101/294 (34%), Gaps = 18/294 (6%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARLTINVAANAHLQHVKLAFENPVSHHFAHN--------DMLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAPHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
H AT +I DE +FY RGI ++ A +I+ F E+ + L E E ++
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE---ELKQ 408
>gi|307131458|ref|YP_003883474.1| SufD protein [Dickeya dadantii 3937]
gi|306528987|gb|ADM98917.1| SufD protein [Dickeya dadantii 3937]
Length = 430
Score = 206 bits (523), Expect = 9e-51, Method: Composition-based stats.
Identities = 55/298 (18%), Positives = 106/298 (35%), Gaps = 12/298 (4%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ---FERTLIIADEG 238
P+ + L ++ + + + + GV L + + R EG
Sbjct: 125 PIQPEVFLHLTESLAAEQTLIQVDNGVTTEKPLYLLHISSGRPAALNTLHYRHHARIGEG 184
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + +E A A + + A +N+ ++ +
Sbjct: 185 ASATLIEHY-ASLEGAAHFSGARLTIDAGENSRTEHYKLGFEAADSYHFAHN-------- 235
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+++ G+ +T + S + GE S+ + G + D+ T + H
Sbjct: 236 DLRLARAAQLHSHSFLLGAGLTRHHTSAQMNGEGVTLSMNSLMVPTGNEVCDTRTYLEHN 295
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
SR + K I + + G + V GA + ++LL+G T P +E
Sbjct: 296 QGFGESRQLHKAIVRDRARGVFNGLIKVAPGALKTDGKMTNNNLLLGRLAEVDTKPQLEI 355
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +I +E LFY RGI E+AA +I+ F E+ + + + +A
Sbjct: 356 YADDVKCSHGATVGRIDEEQLFYLRSRGIGEQAAQQMIIFAFAAELTEAIRDDALRDA 413
>gi|288573843|ref|ZP_06392200.1| SufBD protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569584|gb|EFC91141.1| SufBD protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 377
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 88/400 (22%), Positives = 157/400 (39%), Gaps = 32/400 (8%)
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS 141
D D Y L D+ E T + GI Q + + T S
Sbjct: 2 DIDRKAYGHRAPERPELSRLADLPEEDKATLVRSGIDPDAQVSGSFMLTDS--------S 53
Query: 142 VSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
V +P+ A+ + D +K+Y ++ + G F
Sbjct: 54 TVHCDC-----SDPNVEVLPMQTAM-DLHDGLKEYSWKLMEKESDQV--------DGGYF 99
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ G L T + E + Q ++IA+EGS ++ L GC + + LH +
Sbjct: 100 IRSRPGATVTYPLQTCLYLAEDRSAQDVHNIVIAEEGSTLNILSGCASAPGVRSGLHVGI 159
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
E+ A + ++ V NW + + + IS +
Sbjct: 160 SEIYVKKGATLSFTMVHNWAEEMAVRPK-------TKIMVEEGGTFISNYICLKPAKDLV 212
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
YP+ L G+ + F S+ +S IDSG++++ A +T + +VS+ +S G R
Sbjct: 213 MYPTATLNGQGAVATFNSVFLSTPGSTIDSGSRVILKAPDTRAEVVSRAVSMGGKIYA-R 271
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + + +CD L++ ++ H IP +E++ + + HEA KI+ E + Y
Sbjct: 272 G--HLVGEVPGVKAHLECDGLILSDSGLIHAIPELEARCNDLEMSHEAAVGKIAQEEIEY 329
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ RG+ EE A +LI+ GF+ + LP E + ++ I
Sbjct: 330 LMARGVSEEDARSLIIKGFLSLDIMGLPDELKRDMEETIQ 369
>gi|260574654|ref|ZP_05842657.1| FeS assembly protein SufD [Rhodobacter sp. SW2]
gi|259023071|gb|EEW26364.1| FeS assembly protein SufD [Rhodobacter sp. SW2]
Length = 431
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/416 (19%), Positives = 145/416 (34%), Gaps = 44/416 (10%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ R A R P R + D P +L+ P +
Sbjct: 24 WLGPLRAEALARLSVQGLP---GKRDEYWRYTD------------PAALNSATPPRASAF 68
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ G E + G+ K+ F ++L +GV +S A+
Sbjct: 69 DSGG----EAPVFDGIDRLKIV----FVDGVFDAAASDDLALAGVEIDLLSRAMTADIHW 120
Query: 173 VKKYLSTV-----VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+ + VPV +AALNSA +G + + + +S + +
Sbjct: 121 AQGVYGRLEAAGQVPVNR-PFAALNSAFAPEGVLIRVTG--KAVKPISMIYHHKSDSSDA 177
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
I + G+ ++ LE A R V+E+ D + Q G
Sbjct: 178 ILHHCIKIETGADLTLLENGPAAARF-----NKVIEVDIADGGSFHHIRAQ----GRDHD 228
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ + + + +++ L +T L+G S A+ +G
Sbjct: 229 RRAVTHVFAR----LAAKARFKSFTLTANGMLTRNEVVIDLQGSDSLAHVAGAALGDGAF 284
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D + H A+ SR V K + + ++GK+ V +GA + + +LL+ ++
Sbjct: 285 HHDDTVFITHRAERCESRQVFKKVLKSGAVGVFQGKILVQQGAQKTDGYQLSQALLLDDD 344
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
P +E H +TT I +E LFY RG+P + A +L+V F+ E
Sbjct: 345 SQFLAKPELEIYADDVKCSHGSTTGAIDEEALFYLRARGVPRKTAESLLVLAFLAE 400
>gi|238897308|ref|YP_002922985.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465063|gb|ACQ66837.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 432
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/418 (15%), Positives = 135/418 (32%), Gaps = 46/418 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P ++ + L + + V PE
Sbjct: 42 WQALLKLGFP---HAKHEDWRYTSLNRLLDHTFTLEKK--STVTPEKCGDLAL------- 89
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ G V +D F +SE +L+K+ +
Sbjct: 90 --FMVGQSHKLVFIDGHF-------------------IASLSEIDEIPYELLKRKQAVPA 128
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ----FERTLIIADE 237
PV F+ L ++ + + + G + L + + T R ++ +
Sbjct: 129 PVKPEFFLHLTESLSVENLVIRLAAGQKSKKPLYLLHISSGQETSPLKMAHYRHHLLLEP 188
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
GS +E + + A + + + A + + + + ++
Sbjct: 189 GSEAEVVEHFVSLNTQRHFTGARLTASI-GEEARLHHYKLAFENNQSDHFAHNDFVLASR 247
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+ + G+A+T + S L GE + S+ + + DS T + H
Sbjct: 248 --------ASVHSAHFLLGAALTRHHTSVQLNGEGASASINSLLLPKEMELFDSRTHVEH 299
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K + + + G + V A + ++LL+ + +T P +E
Sbjct: 300 NQIGCQSRQLHKTMVSKQGTAVFNGMIKVAPKAIQTDAHMINNNLLLNASAQVNTKPQLE 359
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
H AT I ++ +FY RGI A +I+ F E+ + + ++ E
Sbjct: 360 IDADDVKCSHGATVGCIDNQQMFYLQSRGITHSQARKMILFAFASELTEGIKLDLVRE 417
>gi|209549491|ref|YP_002281408.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535247|gb|ACI55182.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 424
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/435 (18%), Positives = 144/435 (33%), Gaps = 51/435 (11%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
R P+ R A + DL L + P++
Sbjct: 34 TALRDRLLDDLKKAGLPT---RRIEAWHYTDL-----------KNLLRTLPPQVGDAGSD 79
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVV---TTFKEELKKSGVIFMPISEAICEHPD 171
P+ + + V + A D + V + G+ + +A+
Sbjct: 80 ALEPLVDGSTVLAVIQGHASQKAAADGLGVSAYSEHLLDGSAADGLDALGSDDAV----- 134
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+N + DG V +P L F T R
Sbjct: 135 -----------------GRINGSFVRDGYVVDVPADTELDAPLEIQFVHAGGQT--HTRL 175
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+ G + +E A D L + V ++ + AE+ + +Q D+
Sbjct: 176 PVAFASGVKATVIERHLAVTGDPA-LVSHVSDITVGEGAELTWIILQQHGVEDTHLG--- 231
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ G +K+ + G + + + GE + I + D
Sbjct: 232 -----QIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDV 286
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ H +T S V + + + ++G + V A + C++LL+ ++
Sbjct: 287 TMVLGHDVPHTGSTEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFS 346
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E H AT + I HL+Y + RGIPE A A++VN FV E++++L E
Sbjct: 347 VKPELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDE 406
Query: 472 FAVEAQK-LIDISLE 485
VEA + +I LE
Sbjct: 407 ALVEALEGVISAWLE 421
>gi|301326555|ref|ZP_07219896.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
gi|300846775|gb|EFK74535.1| FeS assembly protein SufD [Escherichia coli MS 78-1]
Length = 423
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEGNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|3025173|sp|Q50519|YB50_METTW RecName: Full=UPF0051 protein MTH1150 homolog; AltName: Full=ORF2
gi|726070|gb|AAA87430.1| unknown [Methanothermobacter thermautotrophicus]
Length = 410
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 93/413 (22%), Positives = 167/413 (40%), Gaps = 29/413 (7%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
ID + A + P++ +V ++ T K+G+ E+E
Sbjct: 21 EDIDLERFIKEEAGEHEEVPRAR-EVPKKVQETLLKVGVDPEERER--------AGTFIQ 71
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT- 197
D + TT E + M ++ A+ + +K Y+ V V + Y +A+
Sbjct: 72 VDQSGICTTCASES----IEIMGMNVAL-DRYSWLKDYMWKAVAVDTDKYT-ATTALREA 125
Query: 198 ----DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
G F+ G R L I ++ Q +IIA+E S + + GC Q
Sbjct: 126 EGEMGGYFIRSMPGSREVFPLQACMFIGDENVMQTAHNIIIAEENSELHIITGCATGQDV 185
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ LH V E A+I ++ V NW + IS L
Sbjct: 186 SSALHVGVSEFYLKKGAKITFTMVHNWAEQVEVRPRTG-------IMVGDDATYISNYIL 238
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
+ YP+ GE S F SI +D G++++ + +++ +VS+ +S
Sbjct: 239 TSPVKSIQSYPTAYCTGENSRVVFQSILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSK 298
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S RG + + +C L++ ++ + +P +E + + HEA K
Sbjct: 299 DASQIYSRG--HLAGRVPEVKGHLECHGLVLSDDSMIYAVPELEGSATELEMSHEAAVGK 356
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
I++E + Y RG+ E+ A ++IV GF+ + LP E A E ++++D+SL+G
Sbjct: 357 IAEEEVMYLTSRGLTEDEAASMIVRGFLSMDITGLPPELAAETKRMLDMSLKG 409
>gi|291617270|ref|YP_003520012.1| SufD [Pantoea ananatis LMG 20103]
gi|291152300|gb|ADD76884.1| SufD [Pantoea ananatis LMG 20103]
Length = 425
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/422 (16%), Positives = 133/422 (31%), Gaps = 51/422 (12%)
Query: 56 EWR-LLAYRRWL---TMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELL 109
E R + A + W + P+ + D L +++ P+ EL
Sbjct: 24 EMRSMQAQQHWQQLMRLGLPTRKHENWKYTPLDGLLAHHFVLPE-----------PHELS 72
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
T + L V + D+ I
Sbjct: 73 ATQVDALSLPLDAVRLVFVDGRFQPGLSSSDTELFE--------------------IQHS 112
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-- 227
++ L V + L ++ + + + + +G L + K G
Sbjct: 113 VAAERRALPAAVQPE--IFLHLTESLAEEVTHIRLARGKAAARPLYLLHITSGKDDGMNT 170
Query: 228 -FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R + +E + +E A DNA ++++ +
Sbjct: 171 VHHRHHLQLEESAEAEVIEHFVTLND-SAHFTGARFTFAVADNARLRHTKLAFESSKSYH 229
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
++++ T G+ ++ S L GE + S+ +
Sbjct: 230 FAHN--------DIVINRDAQVTSTSFLLGAGLSRHNTSTQLNGENTQLSLNSLVLPVNQ 281
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ D+ T + H + SR + K I + G + V + A + ++LL+G
Sbjct: 282 EVADTRTYLEHNKGHCLSRQMHKTIVRDKGRAVFNGHIKVAQHALKTDGQMTNNNLLLGR 341
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H AT +I DE +FY RGI ++AA +I++ F E+ +
Sbjct: 342 LAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTE 401
Query: 467 KL 468
L
Sbjct: 402 TL 403
>gi|238796354|ref|ZP_04639863.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
gi|238719799|gb|EEQ11606.1| hypothetical protein ymoll0001_21820 [Yersinia mollaretii ATCC
43969]
Length = 413
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 96/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + + +P G L + + T + L + + + +
Sbjct: 118 HLTESLAQESLHIRLPGGKLSDKPLYLLHISSGQGSEVLNTSHYRHHLAV-EANAQAEVI 176
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + + DNAE+ + + P
Sbjct: 177 EHF-VSLNQQPHFTGARLTITLGDNAELSHYKLAFETPESYHFAHN--------DLVLSR 227
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 228 DARARSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTRTYLEHNKGYCES 287
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + G + V + A + ++LL+ T P +E
Sbjct: 288 RQLHKTIVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 347
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I E LFY RGI + A +I+ F E+ + + E
Sbjct: 348 CSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAIHSE 394
>gi|325916456|ref|ZP_08178728.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
gi|325537376|gb|EGD09100.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
Length = 420
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/435 (18%), Positives = 152/435 (34%), Gaps = 38/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P LL
Sbjct: 16 DARRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPTLLDAAVLD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP + G ++ ++ + GV +S A+ D +
Sbjct: 68 DIPAPRLVFVNGRPSAALSDVSTL--------------PDGVQLDTLSAALAAGDDA-RH 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
L D +A LN+A+ +G V + G + + L F R LI
Sbjct: 113 LLGRRFDGSDAVFARLNAALADEGVLVRVHDGAQIALPLHIVFVGVAGEHDLSWHYRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ ++ +E D L +V+ + +A + ++ VQ
Sbjct: 173 ELRAGAALNVVEHHL-HVGDAAHLDNSVMHVHLGQDATLSHARVQADSVHA--------T 223
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 224 ALLRTDAVLARNARYQRVDLELGAGLSRHELNVRLEGSNAQLTANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + +GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIHIRQGADGTDARLSNKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ D LFY RG+P+ A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQAEAQRLLSAAFCHEPLRVLP---- 399
Query: 474 VEAQKLIDISLEGSV 488
++ + L+ ++
Sbjct: 400 AALSAVLALQLDRAL 414
>gi|40889898|pdb|1VH4|A Chain A, Crystal Structure Of A Stabilizer Of Iron Transporter
gi|40889899|pdb|1VH4|B Chain B, Crystal Structure Of A Stabilizer Of Iron Transporter
Length = 435
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 130 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 188
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 189 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 239
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 240 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 299
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 300 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 359
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 360 CSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 406
>gi|302518371|ref|ZP_07270713.1| FeS assembly protein SufD [Streptomyces sp. SPB78]
gi|318075715|ref|ZP_07983047.1| iron-regulated ABC-type transporter [Streptomyces sp. SA3_actF]
gi|302427266|gb|EFK99081.1| FeS assembly protein SufD [Streptomyces sp. SPB78]
Length = 391
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 65/326 (19%), Positives = 120/326 (36%), Gaps = 19/326 (5%)
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
E D + D A SA + + +PK R + R + G
Sbjct: 82 QETVDREDPRVGKGGTPVDRVAAQAFSAF-EKANVITVPKEARPAEPIRIAVRGH--GGV 138
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ ++ + + + + AA V+ + D A++ +VQ+W
Sbjct: 139 AYGHQVVELGAFAEAVVV-----LDHTGDAVLAANVDYLLGDGAKLTVVSVQDWGTETVH 193
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V + G + + G + +P E + ++
Sbjct: 194 --------VGQHNALIGRDASFKSVVVTFGGDLVRLHPRVSYTAPGGEAELLGLYFTDKG 245
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q + + H A + TS + KG G ++ + G V + A + + +L++
Sbjct: 246 QHHEHRLFVDHNAPHCTSNVSYKGALQGEGAHAVWIGDVLIEAAAEGTDTYEMNRNLVLT 305
Query: 406 NNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ ++P +E + H +TT + DE LFY + RGI EE A L+V GF E+
Sbjct: 306 DGARVDSVPNLEIETGEIVGAGHASTTGRFDDEQLFYLMARGIAEEDARRLVVRGFFAEL 365
Query: 465 LQKLPMEFAVE-AQKLIDISLEGSVG 489
+Q++ + E I LEG+VG
Sbjct: 366 VQQIGLPDVEERLLAKIGEELEGAVG 391
>gi|318056384|ref|ZP_07975107.1| iron-regulated ABC-type transporter [Streptomyces sp. SA3_actG]
gi|333027959|ref|ZP_08456023.1| putative FeS assembly protein SufD [Streptomyces sp. Tu6071]
gi|332747811|gb|EGJ78252.1| putative FeS assembly protein SufD [Streptomyces sp. Tu6071]
Length = 385
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 65/326 (19%), Positives = 120/326 (36%), Gaps = 19/326 (5%)
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
E D + D A SA + + +PK R + R + G
Sbjct: 76 QETVDREDPRVGKGGTPVDRVAAQAFSAF-EKANVITVPKEARPAEPIRIAVRGH--GGV 132
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ ++ + + + + AA V+ + D A++ +VQ+W
Sbjct: 133 AYGHQVVELGAFAEAVVV-----LDHTGDAVLAANVDYLLGDGAKLTVVSVQDWGTETVH 187
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V + G + + G + +P E + ++
Sbjct: 188 --------VGQHNALIGRDASFKSVVVTFGGDLVRLHPRVSYTAPGGEAELLGLYFTDKG 239
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q + + H A + TS + KG G ++ + G V + A + + +L++
Sbjct: 240 QHHEHRLFVDHNAPHCTSNVSYKGALQGEGAHAVWIGDVLIEAAAEGTDTYEMNRNLVLT 299
Query: 406 NNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ ++P +E + H +TT + DE LFY + RGI EE A L+V GF E+
Sbjct: 300 DGARVDSVPNLEIETGEIVGAGHASTTGRFDDEQLFYLMARGIAEEDARRLVVRGFFAEL 359
Query: 465 LQKLPMEFAVE-AQKLIDISLEGSVG 489
+Q++ + E I LEG+VG
Sbjct: 360 VQQIGLPDVEERLLAKIGEELEGAVG 385
>gi|239931983|ref|ZP_04688936.1| hypothetical protein SghaA1_27424 [Streptomyces ghanaensis ATCC
14672]
gi|291440353|ref|ZP_06579743.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
gi|291343248|gb|EFE70204.1| iron-regulated ABC-type transporter [Streptomyces ghanaensis ATCC
14672]
Length = 394
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 60/306 (19%), Positives = 116/306 (37%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V +PK + ++ +G + +I + +
Sbjct: 103 DRVAAQAYSAFEQASVVTVPKETVLTEPIRI--AVHGEGGTAYAHQVIELGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA VE V D A++ +VQ+W + G
Sbjct: 160 ----IDHTGDAVLAANVEYVLGDGAKLTVVSVQDWDDKAVHAA--------QHDALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P G E + + ++ Q + + H + S
Sbjct: 208 ASFKSVVITFGGDVVRLHPRVTYAGPGGEAELFGLYFTDAGQHQEHRLLVDHNVPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 VVYKGALQGDDAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY + RGIPE+ A L+V GF E++Q++ + E I+
Sbjct: 328 GAGHASATGRFDDEQLFYLMARGIPEKDARRLVVRGFFAELVQQIGVPDIEERLIAKIEE 387
Query: 483 SLEGSV 488
LE +V
Sbjct: 388 ELEAAV 393
>gi|320668705|gb|EFX35510.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. LSU-61]
Length = 423
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQRVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-ELAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|16129637|ref|NP_416196.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
str. K-12 substr. MG1655]
gi|89108521|ref|AP_002301.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
W3110]
gi|170081341|ref|YP_001730661.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|238900896|ref|YP_002926692.1| component of SufBCD complex [Escherichia coli BW2952]
gi|256022656|ref|ZP_05436521.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 4_1_40B]
gi|300951273|ref|ZP_07165122.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|300958562|ref|ZP_07170692.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|301027874|ref|ZP_07191175.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|301647864|ref|ZP_07247646.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|307138340|ref|ZP_07497696.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli H736]
gi|331642279|ref|ZP_08343414.1| FeS assembly protein SufD [Escherichia coli H736]
gi|3025254|sp|P77689|SUFD_ECOLI RecName: Full=FeS cluster assembly protein sufD
gi|224983401|pdb|2ZU0|A Chain A, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|224983402|pdb|2ZU0|B Chain B, Crystal Structure Of Sufc-Sufd Complex Involved In The
Iron- Sulfur Cluster Biosynthesis
gi|1742765|dbj|BAA15456.1| component of SufBCD complex [Escherichia coli str. K12 substr.
W3110]
gi|1787971|gb|AAC74751.1| FeS cluster assembly protein of SufBCD complex [Escherichia coli
str. K-12 substr. MG1655]
gi|169889176|gb|ACB02883.1| component of SufBCD complex [Escherichia coli str. K-12 substr.
DH10B]
gi|238860170|gb|ACR62168.1| component of SufBCD complex [Escherichia coli BW2952]
gi|260449196|gb|ACX39618.1| FeS assembly protein SufD [Escherichia coli DH1]
gi|299879030|gb|EFI87241.1| FeS assembly protein SufD [Escherichia coli MS 196-1]
gi|300314771|gb|EFJ64555.1| FeS assembly protein SufD [Escherichia coli MS 175-1]
gi|300449454|gb|EFK13074.1| FeS assembly protein SufD [Escherichia coli MS 116-1]
gi|301074005|gb|EFK88811.1| FeS assembly protein SufD [Escherichia coli MS 146-1]
gi|309701906|emb|CBJ01218.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli ETEC H10407]
gi|315136322|dbj|BAJ43481.1| cysteine desulfurase activator complex subunitSufD [Escherichia
coli DH1]
gi|315618876|gb|EFU99459.1| feS assembly protein SufD [Escherichia coli 3431]
gi|323937284|gb|EGB33563.1| FeS assembly protein SufD [Escherichia coli E1520]
gi|323940652|gb|EGB36843.1| FeS assembly protein SufD [Escherichia coli E482]
gi|331039077|gb|EGI11297.1| FeS assembly protein SufD [Escherichia coli H736]
Length = 423
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|268592598|ref|ZP_06126819.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
gi|291312012|gb|EFE52465.1| FeS assembly protein SufD [Providencia rettgeri DSM 1131]
Length = 435
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 75/408 (18%), Positives = 129/408 (31%), Gaps = 43/408 (10%)
Query: 72 SWARIR---YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
W + P +D +Y + D D E E L
Sbjct: 46 HWEMAKQVGLPEFRHEDWHYTPLNTVLEAQYRFSDSDVEAKD---------CEALALPID 96
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
V +D + S + P ++ ++ DL+ PV +
Sbjct: 97 AYRLVLIDGRYSSALSS-----------IDMGPFQVSLLDNQDLLPS------PVNSEIF 139
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE-----RTLIIADEGSYVSY 243
L ++ V++ L Q R + D S
Sbjct: 140 LHLTESLAVQPLVVHLAANKIAEKPLYLLNISTGSSDKQATNISQYRYHLTLDANSKAQV 199
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+E + + + + + DNA+ + + G
Sbjct: 200 IEHYVSLNDQMHMTGSRLT-VEVGDNADFSHFKLNIENGQAQHFAHN--------DIVIG 250
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
S++ T G+ +T + S L GE + E S+ + G + D+ T + H
Sbjct: 251 RDSRVKSTSFLLGALLTRNHTSARLDGENTEFELNSLLLPKGNEIADTRTYLEHNKGYCN 310
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SR + K I+ S + G + V A + ++LL+G T P +E
Sbjct: 311 SRQLHKVIAMDSSKAVFNGMIKVAPNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYADDV 370
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE LFY RGI +AA +I+ F E+ + + E
Sbjct: 371 KCGHGATVGRIDDEQLFYLRSRGIEGKAAKHMIIIAFAAELTESIESE 418
>gi|330994037|ref|ZP_08317967.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
gi|329758983|gb|EGG75497.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
Length = 424
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/415 (16%), Positives = 135/415 (32%), Gaps = 38/415 (9%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A P R A + L A Q +D + L
Sbjct: 26 RRRAADFLRQAGLP---RAGVEAWKYTSLRALAGVAFAAATQDVD------PSVVDALLA 76
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
I L V V+ FD+ +GV + + +
Sbjct: 77 EIETVSGLGAAAPRVVFVNGHFDA-------ARSRLPTGVRVSTFA---------AEGRI 120
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVR--CPMELSTYFRINEKGTGQFERTLIIA 235
+ + ALN+ + DG + +P+GV C + S R I+
Sbjct: 121 GDDIDPAGDVTTALNTVLAHDGLVLVVPEGVDAGCLLLASIGVAAGGVPISFHPRHSIVV 180
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++G ++ L+ H + ++ + ++ VQ +
Sbjct: 181 EKGGRLALLDAAAGQGFYL---HNPLYDITVAGGGHLSHARVQVEGQEAVH--------L 229
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
L G++++ +L ++C + G Q D + +
Sbjct: 230 AVSHARIAAAGLYDSFTLTLGASLSRHEVHAVLTATRACVHVNGAQLLTGRQHGDLTSVI 289
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A + SR K + +G ++ ++GK+ V R A + + +LL+ + P
Sbjct: 290 THAAPDCISRQTVKNVLSGQAHGVFQGKIHVDRIAQKTDGYQMNQALLLSDQAEIDAKPE 349
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+E H AT + ++ LFY RGI + A ++++ F+ +V+ +
Sbjct: 350 LEIYADDVKCSHGATVGALDEDQLFYLRSRGISGDVARSILIRAFLHDVVDLIDD 404
>gi|15802093|ref|NP_288115.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 EDL933]
gi|15831642|ref|NP_310415.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. Sakai]
gi|168751908|ref|ZP_02776930.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|168756679|ref|ZP_02781686.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|168762258|ref|ZP_02787265.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|168770440|ref|ZP_02795447.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|168775022|ref|ZP_02800029.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|168782093|ref|ZP_02807100.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|168789815|ref|ZP_02814822.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|168800141|ref|ZP_02825148.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|195937365|ref|ZP_03082747.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. EC4024]
gi|208810501|ref|ZP_03252377.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208816538|ref|ZP_03257658.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208821635|ref|ZP_03261955.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209397107|ref|YP_002270750.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4115]
gi|217329028|ref|ZP_03445109.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254793298|ref|YP_003078135.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. TW14359]
gi|261227874|ref|ZP_05942155.1| component of SufBCD complex [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258392|ref|ZP_05950925.1| component of SufBCD complex [Escherichia coli O157:H7 str. FRIK966]
gi|291282811|ref|YP_003499629.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|12515683|gb|AAG56668.1|AE005391_5 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13361855|dbj|BAB35811.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187769397|gb|EDU33241.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4196]
gi|188014123|gb|EDU52245.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4113]
gi|189000349|gb|EDU69335.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4076]
gi|189356214|gb|EDU74633.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4401]
gi|189360642|gb|EDU79061.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4486]
gi|189367525|gb|EDU85941.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4501]
gi|189370617|gb|EDU89033.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC869]
gi|189377610|gb|EDU96026.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC508]
gi|208725017|gb|EDZ74724.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4206]
gi|208730881|gb|EDZ79570.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4045]
gi|208741758|gb|EDZ89440.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4042]
gi|209158507|gb|ACI35940.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. EC4115]
gi|209769178|gb|ACI82901.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769180|gb|ACI82902.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769182|gb|ACI82903.1| hypothetical protein ECs2388 [Escherichia coli]
gi|209769186|gb|ACI82905.1| hypothetical protein ECs2388 [Escherichia coli]
gi|217318375|gb|EEC26802.1| FeS assembly protein SufD [Escherichia coli O157:H7 str. TW14588]
gi|254592698|gb|ACT72059.1| component of SufBCD complex [Escherichia coli O157:H7 str. TW14359]
gi|290762684|gb|ADD56645.1| FeS assembly protein SufD [Escherichia coli O55:H7 str. CB9615]
gi|320188369|gb|EFW63031.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. EC1212]
gi|320641896|gb|EFX11264.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H7 str. G5101]
gi|320647352|gb|EFX16160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. 493-89]
gi|320652646|gb|EFX20915.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O157:H- str. H 2687]
gi|320653031|gb|EFX21227.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320658715|gb|EFX26392.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O55:H7 str. USDA 5905]
gi|326342048|gb|EGD65829.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1044]
gi|326343600|gb|EGD67362.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli O157:H7
str. 1125]
Length = 423
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-ELAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|306843828|ref|ZP_07476426.1| FeS assembly protein SufD [Brucella sp. BO1]
gi|306275906|gb|EFM57622.1| FeS assembly protein SufD [Brucella sp. BO1]
Length = 425
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/429 (18%), Positives = 145/429 (33%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L+
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPALI-------- 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V + S V K GV P+ EA+ + + +
Sbjct: 89 ---------------VGSSVIAASNGVALPAK---ASKGVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G SK++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSKLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|303245538|ref|ZP_07331822.1| SufBD protein [Desulfovibrio fructosovorans JJ]
gi|302493387|gb|EFL53249.1| SufBD protein [Desulfovibrio fructosovorans JJ]
Length = 385
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 82/405 (20%), Positives = 155/405 (38%), Gaps = 26/405 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
ID D ++ P L +DP G+ + E++
Sbjct: 2 EKIDLHDFR-FSGSTLGEIPD-LRTLDPADKAEMLMSGVDVEERQR--------AGTYLQ 51
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
D SV + + GV + I EA+ ++ D + + T V + + +
Sbjct: 52 VDHGSVH----CKSLQPGVEILDIKEALKKY-DGLPGHFWTQVDKDKDEFTRAAAENLHG 106
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G FV KG + + + + GQ ++I ++ S + + GC+ + H
Sbjct: 107 GYFVRTEKGAKITEPVQSCLFLKSDMVGQNVHNVVIVEDDSELHIITGCSVAHDSKGAAH 166
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ E NA++ ++ + NW G + I+ L
Sbjct: 167 LGISEFFVGKNAKLTFTMIHNWADSTVVRPRTG-------GVVEEGGAFINNYVLLKPVK 219
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP+ L G + F S+ ++ +DSG+++ A +T ++++ I++G +
Sbjct: 220 DLQSYPAIRLNGRGAVARFNSVIVAPKGSYVDSGSRIELNAPDTRGEVIARTIASGGTIV 279
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+ RG + + ++ +C L++G H +P + L HEA KI E
Sbjct: 280 S-RG--FIGGNSVPAKGHLECKGLILG-GGVIHAVPELMGTMDGVELSHEAAVGKIDQEE 335
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+ Y + RG+ E+ A + IV GF+ + LP E +K I S
Sbjct: 336 IEYLMARGLDEDEATSTIVRGFLNVDIMGLPKELHDVIEKTIAES 380
>gi|283833344|ref|ZP_06353085.1| FeS assembly protein SufD [Citrobacter youngae ATCC 29220]
gi|291070985|gb|EFE09094.1| FeS assembly protein SufD [Citrobacter youngae ATCC 29220]
Length = 423
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 70/417 (16%), Positives = 131/417 (31%), Gaps = 52/417 (12%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
++ L + P+ + + L + + S + D + P +
Sbjct: 33 LQQMLRLGLPTRKHEDWKYTPLEGLTNSRFVSSISAITSAQCDALAPAI----------- 81
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
V VD F F + + SG E ++ L T
Sbjct: 82 --------DAVRLVFVDGQF-----CPMFSDSVDGSGFDITVDDE---------RQMLPT 119
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLII 234
+ + L ++ + + + + R L +E T + L
Sbjct: 120 AIQPE--VFLHLTESLSRSVTHILVKRNQRPAKPLLLLHITQGLTGDEVNTAHYRHHL-E 176
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
EG+ + +E + A + + NA + + + P +
Sbjct: 177 LAEGAEATVIEHY-VSLSELRHFTGARLTMNVAANAHLHHIKLAFENPLSHHFAHNDIHL 235
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G A+ S L GE + S+A+ + D+ T
Sbjct: 236 SADASAV--------SQSFLLGGAVLRHNTSTQLNGENTTLRLNSLAMPVKNEVCDTRTW 287
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H SR + K I + + G ++V + A + ++LL+G T P
Sbjct: 288 LAHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKP 347
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+E H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 348 QLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIGQQDAQQMILYAFAAELTEALRDE 404
>gi|212550996|ref|YP_002309313.1| Fe-S cluster assembly protein SufD [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549234|dbj|BAG83902.1| Fe-S cluster assembly protein SufD [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 449
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 79/434 (18%), Positives = 152/434 (35%), Gaps = 22/434 (5%)
Query: 58 RLLAYRRWLTMKDP-SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + P + R ID A + D+ + + L
Sbjct: 27 REKALENFQHLGFPPNVEDHRCTNID-------VATLLKENSRLYLDLSGKKINPNTTL- 78
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
L V + K++L + ++ ++PD+ KY
Sbjct: 79 --YYNVPQLISCIQHFVINGYFLEHERKKNEDKQKLPEC-FFSGSLNTFAKQYPDIFLKY 135
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER-TLIIA 235
+ + +A N+ DG +YIPK V + +N K R LII
Sbjct: 136 YNRQSSFQGDGLSAFNTMFIQDGYVLYIPKNVIVKTPIQLTNILNSKVDLMVNRRNLIIL 195
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++ + L + + E+ + + + + ++ +
Sbjct: 196 EQNAQAKLLICDHTTNENPTSAFVQITEIYLEERSVLDFYELEESSKKTIRLTHNF---- 251
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
C+ SK+ + + IT + L+ E + Y +AI++ Q+ID+ T +
Sbjct: 252 ----VCQKESSKLVIDTITLRNGITQNNYTIDLKKENAETYIYGVAIADEKQKIDNCTLI 307
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A S + K + S + GK+ V A ++ + S+L N C H+ P
Sbjct: 308 YHNAPKCYSNELFKYVLDEESIGAFVGKIVVSPNAYKTKAYQSNRSILGSNTCQMHSKPQ 367
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAV 474
+E H + + + LFY RGIP+ A L+ FV ++L + ++
Sbjct: 368 LEIYTDDVKCSHGMSIGHLDETALFYMRSRGIPDNEARFLLKTAFVSDILGGISIKGLKK 427
Query: 475 EAQKLIDISLEGSV 488
Q L++ + +
Sbjct: 428 RLQLLVEKRFKERL 441
>gi|110805658|ref|YP_689178.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 5 str. 8401]
gi|110615206|gb|ABF03873.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 388
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 93 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 151
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 152 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 202
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 203 DATAFSHSFLLGGAVLRHNTSTQLNGENSKLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 262
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 263 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 322
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 323 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 369
>gi|254719031|ref|ZP_05180842.1| FeS assembly protein SufD [Brucella sp. 83/13]
gi|265984021|ref|ZP_06096756.1| Fe-S assembly protein SufD [Brucella sp. 83/13]
gi|306840081|ref|ZP_07472867.1| FeS assembly protein SufD [Brucella sp. NF 2653]
gi|264662613|gb|EEZ32874.1| Fe-S assembly protein SufD [Brucella sp. 83/13]
gi|306404809|gb|EFM61102.1| FeS assembly protein SufD [Brucella sp. NF 2653]
Length = 425
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 76/429 (17%), Positives = 143/429 (33%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L+ I
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPALIAG--SSVI 94
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
LA GV P+ EA+ + + +
Sbjct: 95 AASNGVALAAKAPK------------------------GVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|82543949|ref|YP_407896.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii Sb227]
gi|81245360|gb|ABB66068.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 423
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 99/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L + E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMYITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|23501817|ref|NP_697944.1| hypothetical protein BR0933 [Brucella suis 1330]
gi|161618889|ref|YP_001592776.1| FeS assembly protein SufD [Brucella canis ATCC 23365]
gi|225627419|ref|ZP_03785456.1| FeS assembly protein SufD [Brucella ceti str. Cudo]
gi|254689177|ref|ZP_05152431.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|254693660|ref|ZP_05155488.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|254701693|ref|ZP_05163521.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|254704237|ref|ZP_05166065.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|254706861|ref|ZP_05168689.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|254710030|ref|ZP_05171841.1| FeS assembly protein SufD [Brucella pinnipedialis B2/94]
gi|254714032|ref|ZP_05175843.1| FeS assembly protein SufD [Brucella ceti M644/93/1]
gi|254716910|ref|ZP_05178721.1| FeS assembly protein SufD [Brucella ceti M13/05/1]
gi|256031525|ref|ZP_05445139.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|256159660|ref|ZP_05457413.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|256254929|ref|ZP_05460465.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|256257427|ref|ZP_05462963.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|256369359|ref|YP_003106867.1| FeS assembly protein SufD [Brucella microti CCM 4915]
gi|260168657|ref|ZP_05755468.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|260566516|ref|ZP_05836986.1| FeS assembly protein SufD [Brucella suis bv. 4 str. 40]
gi|260754676|ref|ZP_05867024.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|260883702|ref|ZP_05895316.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|261213927|ref|ZP_05928208.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|261218717|ref|ZP_05932998.1| Fe-S assembly protein SufD [Brucella ceti M13/05/1]
gi|261222111|ref|ZP_05936392.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|261314327|ref|ZP_05953524.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|261317577|ref|ZP_05956774.1| Fe-S assembly protein SufD [Brucella pinnipedialis B2/94]
gi|261321785|ref|ZP_05960982.1| Fe-S assembly protein SufD [Brucella ceti M644/93/1]
gi|261752244|ref|ZP_05995953.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|261754903|ref|ZP_05998612.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|261758131|ref|ZP_06001840.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|265988611|ref|ZP_06101168.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|265998076|ref|ZP_06110633.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|297248276|ref|ZP_06931994.1| FeS assembly protein SufD [Brucella abortus bv. 5 str. B3196]
gi|23347751|gb|AAN29859.1| conserved hypothetical protein [Brucella suis 1330]
gi|161335700|gb|ABX62005.1| FeS assembly protein SufD [Brucella canis ATCC 23365]
gi|225617424|gb|EEH14469.1| FeS assembly protein SufD [Brucella ceti str. Cudo]
gi|255999519|gb|ACU47918.1| FeS assembly protein SufD [Brucella microti CCM 4915]
gi|260156034|gb|EEW91114.1| FeS assembly protein SufD [Brucella suis bv. 4 str. 40]
gi|260674784|gb|EEX61605.1| FeS assembly protein SufD [Brucella abortus bv. 6 str. 870]
gi|260873230|gb|EEX80299.1| FeS assembly protein SufD [Brucella abortus bv. 9 str. C68]
gi|260915534|gb|EEX82395.1| FeS assembly protein SufD [Brucella abortus bv. 3 str. Tulya]
gi|260920695|gb|EEX87348.1| FeS assembly protein SufD [Brucella ceti B1/94]
gi|260923806|gb|EEX90374.1| Fe-S assembly protein SufD [Brucella ceti M13/05/1]
gi|261294475|gb|EEX97971.1| Fe-S assembly protein SufD [Brucella ceti M644/93/1]
gi|261296800|gb|EEY00297.1| Fe-S assembly protein SufD [Brucella pinnipedialis B2/94]
gi|261303353|gb|EEY06850.1| FeS assembly protein SufD [Brucella pinnipedialis M163/99/10]
gi|261738115|gb|EEY26111.1| FeS assembly protein SufD [Brucella sp. F5/99]
gi|261741997|gb|EEY29923.1| FeS assembly protein SufD [Brucella suis bv. 5 str. 513]
gi|261744656|gb|EEY32582.1| FeS assembly protein SufD [Brucella suis bv. 3 str. 686]
gi|262552544|gb|EEZ08534.1| FeS assembly protein SufD [Brucella ceti M490/95/1]
gi|264660808|gb|EEZ31069.1| FeS assembly protein SufD [Brucella pinnipedialis M292/94/1]
gi|297175445|gb|EFH34792.1| FeS assembly protein SufD [Brucella abortus bv. 5 str. B3196]
Length = 425
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/429 (18%), Positives = 146/429 (34%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPAL--------- 87
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
I I+A +A A GV P+ EA+ + + +
Sbjct: 88 -IAGSSIIAASNGVALAAKAP----------------KGVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|294852287|ref|ZP_06792960.1| FeS assembly protein SufD [Brucella sp. NVSL 07-0026]
gi|294820876|gb|EFG37875.1| FeS assembly protein SufD [Brucella sp. NVSL 07-0026]
Length = 425
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/429 (18%), Positives = 146/429 (34%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPAL--------- 87
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
I I+A +A A GV P+ EA+ + + +
Sbjct: 88 -IAGSSIIAASNGVALAAKAP----------------KGVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADGSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|281178751|dbj|BAI55081.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 423
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVTQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|300781151|ref|ZP_07091005.1| FeS assembly protein SufD [Corynebacterium genitalium ATCC 33030]
gi|300532858|gb|EFK53919.1| FeS assembly protein SufD [Corynebacterium genitalium ATCC 33030]
Length = 393
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/405 (19%), Positives = 136/405 (33%), Gaps = 29/405 (7%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
K VG + D +L +Y+ + + E+ G V TF
Sbjct: 5 VTKKERVGNATFHDNKGDLFASYD-----VNDFEVPQGRDEIWRFVSLRRLRGLHNGTFP 59
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
++ ++ V +E E + L T D A ++ + V +P
Sbjct: 60 DQ-GEAQVNVSGPAEVTVEQVSPDDERLKTTSAPVDRIAAQAWTS-MPHATIVSVPANAE 117
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
+ F I + + + L Q + + HA V V DN
Sbjct: 118 LTEPVVITTTGAGLDVTTFSGLHIEVGQSATATIL-----VQYEGSGTHADNVNFVIGDN 172
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++ + W V + G + + T G + P
Sbjct: 173 AQVNVVVDEQWNNDAVH--------VGAQSIVCGRDAVLRHTVATFGGELVRNTPRVKYA 224
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRG 382
G E + ++ Q I++ + H S ++ KG G + + G
Sbjct: 225 GSGGDVELTGVYYADDGQYIENRLLVDHNHPYCRSNVLYKGALQGGKDSKLPDARTCWVG 284
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFY 441
V + A+ + + ++++ + A IP +E + H AT + +E LFY
Sbjct: 285 DVLIRSNASGTETYEANRNIVLTDGARADAIPNLEIETGDIPGAGHAATVGRFDEEQLFY 344
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDISLE 485
RGIP+ A LIV GF EVL ++P+E E + LE
Sbjct: 345 LKSRGIPDGEARRLIVRGFFNEVLNRIPVENVREELINRVSGELE 389
>gi|238765285|ref|ZP_04626213.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
gi|238696508|gb|EEP89297.1| hypothetical protein ykris0001_43340 [Yersinia kristensenii ATCC
33638]
Length = 420
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 98/284 (34%), Gaps = 15/284 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + V +P G L + T + L I + G+ +
Sbjct: 125 HLTESLAQESLHVRLPAGQHSDKPLYLLHISSGNGSEVVNTSHYRHHLAI-EAGAQAEVI 183
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E ++ A + + DNAE+ + + P + G
Sbjct: 184 EHF-VSLNEQPHFTGARLTVSVGDNAELNHCKLAFEAPQSTHFAHN--------DLVLGR 234
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 235 DARAKSYSFLLGAGLTRHNTSAQLNGEGASLSMNSLLLPIGREICDTRTYLEHNKGYCDS 294
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + G + V + A + ++LL+ T P +E
Sbjct: 295 RQLHKTIVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 354
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I E LFY RGI + A +I+ F E+ + +
Sbjct: 355 CSHGATVGRIDTEQLFYLQSRGINQADAQQMIIFAFAAELTEAI 398
>gi|17987323|ref|NP_539957.1| ABC transporter ATP-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|225852444|ref|YP_002732677.1| FeS assembly protein SufD [Brucella melitensis ATCC 23457]
gi|256044601|ref|ZP_05447505.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|256113481|ref|ZP_05454315.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|256264062|ref|ZP_05466594.1| FeS assembly protein SufD [Brucella melitensis bv. 2 str. 63/9]
gi|260563953|ref|ZP_05834439.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. 16M]
gi|265991025|ref|ZP_06103582.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|265994862|ref|ZP_06107419.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|17983004|gb|AAL52221.1| abc transporter ATP-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|225640809|gb|ACO00723.1| FeS assembly protein SufD [Brucella melitensis ATCC 23457]
gi|260153969|gb|EEW89061.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. 16M]
gi|262765975|gb|EEZ11764.1| FeS assembly protein SufD [Brucella melitensis bv. 3 str. Ether]
gi|263001809|gb|EEZ14384.1| FeS assembly protein SufD [Brucella melitensis bv. 1 str. Rev.1]
gi|263094257|gb|EEZ18127.1| FeS assembly protein SufD [Brucella melitensis bv. 2 str. 63/9]
gi|326408958|gb|ADZ66023.1| FeS assembly protein SufD [Brucella melitensis M28]
gi|326538672|gb|ADZ86887.1| FeS assembly protein SufD [Brucella melitensis M5-90]
Length = 425
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/429 (18%), Positives = 147/429 (34%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPAL--------- 87
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
I I+A +A A GV+ P+ EA+ + + +
Sbjct: 88 -IAGSSIIAASNGVALAAKAP----------------KGVLLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|237731313|ref|ZP_04561794.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
sp. 30_2]
gi|226906852|gb|EEH92770.1| cysteine desulfurase activator complex subunit SufD [Citrobacter
sp. 30_2]
Length = 414
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 73/429 (17%), Positives = 136/429 (31%), Gaps = 54/429 (12%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + P + E+ P +
Sbjct: 24 LQQMLRLGLPT---RKHEDWKYT-------PLEGLTNSQFVSHVAEITSAQCAALSPTID 73
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V T + SG I +A P ++ +
Sbjct: 74 AVRLVFVDGQFSP------------TLSDSTDGSGFDI-TIDDARQALPAAIQPEV---- 116
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
+ L ++ + + + + +R L +E T + L
Sbjct: 117 ------FLHLTESLSRSVTHIQVKRNLRPAKPLLLLHITQGLAGDEVNTAHYRHHL-ELA 169
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E A + A + + NA +++ + P
Sbjct: 170 EGAEATVIEHY-ASLSERRHFTGARLTMNVAANAHLRHIKLAFENPFSHHFAHN------ 222
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + G A+ S L GE + S+A+ + D+ T +
Sbjct: 223 --DIQLGADATAVSHSFLLGDAVLRHNTSTQLNGENTTLRLNSLAMPVKNEVCDTRTWLE 280
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 281 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 340
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME----- 471
E H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 341 EIYADDVKCSHGATVGRIDDEQMFYLRSRGIGQQDAQHMILYAFAAELTEALGDETLKQQ 400
Query: 472 -FAVEAQKL 479
A AQ+L
Sbjct: 401 VLARIAQRL 409
>gi|323187105|gb|EFZ72421.1| feS assembly protein SufD [Escherichia coli RN587/1]
Length = 423
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|222033437|emb|CAP76178.1| Protein sufD [Escherichia coli LF82]
gi|312946281|gb|ADR27108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O83:H1 str. NRG 857C]
Length = 423
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|26247931|ref|NP_753971.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli CFT073]
gi|227885900|ref|ZP_04003705.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300994860|ref|ZP_07180973.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|301050988|ref|ZP_07197834.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|306815066|ref|ZP_07449222.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|26108334|gb|AAN80536.1|AE016761_111 SufD protein [Escherichia coli CFT073]
gi|227837079|gb|EEJ47545.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 83972]
gi|300297365|gb|EFJ53750.1| FeS assembly protein SufD [Escherichia coli MS 185-1]
gi|300406200|gb|EFJ89738.1| FeS assembly protein SufD [Escherichia coli MS 45-1]
gi|305851714|gb|EFM52167.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli NC101]
gi|307553702|gb|ADN46477.1| FeS assembly protein SufD [Escherichia coli ABU 83972]
gi|315290528|gb|EFU49902.1| FeS assembly protein SufD [Escherichia coli MS 153-1]
gi|320195423|gb|EFW70048.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
WV_060327]
Length = 423
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|251789308|ref|YP_003004029.1| FeS assembly protein SufD [Dickeya zeae Ech1591]
gi|247537929|gb|ACT06550.1| FeS assembly protein SufD [Dickeya zeae Ech1591]
Length = 430
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/428 (14%), Positives = 137/428 (32%), Gaps = 50/428 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+++ + P + + L + + + + + L +P+ +
Sbjct: 35 WQQVKQLGIP---HRKLEHWKYTPLEQFLEHEFTTTVTDTEVTPAQC----DALALPV-D 86
Query: 122 QEILAGVQTSKVAVDAVFDSVSVV-TTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
L V + DS ++SG+ + +
Sbjct: 87 GWRLVFVDGRLCRALSDADSGPYQVEVLSSSRRQSGLAPIQPEVFLH------------- 133
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ---FERTLIIADE 237
L ++ + + + + GV L + + R
Sbjct: 134 ----------LTESLAVEQTLIQVGNGVIAEKPLYLLHISSGQPAALNTLHYRHHARIGA 183
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + +E + A + + A +N+ +++ +
Sbjct: 184 GASATLIEHYASLAG-AAHFSGARLTIDAGENSVVEHYKLGFEATDSYHFAHN------- 235
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+++ G+ +T + S + GE + S+ + G + D+ T + H
Sbjct: 236 -DLRLAQAAQLHSHSFLLGAGLTRHHTSAQMNGEGATLSMNSLMVPTGNEVCDTRTYLEH 294
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + + G + V GA + ++LL+G T P +E
Sbjct: 295 NQGFGESRQLHKAIVRDRARGVFNGLIKVAPGALKTDGKMTNNNLLLGRLAEVDTKPQLE 354
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME------ 471
H AT +I ++ LFY RGI E+AA +I+ F E+ + + +
Sbjct: 355 IYADDVKCSHGATVGRIDEDQLFYLRSRGIGEQAAQQMIIFAFAAELTEAIHDDRLRDAV 414
Query: 472 FAVEAQKL 479
A AQ+L
Sbjct: 415 LARVAQRL 422
>gi|218699754|ref|YP_002407383.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI39]
gi|218369740|emb|CAR17511.1| component of SufBCD complex [Escherichia coli IAI39]
Length = 423
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAHSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|310815929|ref|YP_003963893.1| SufBD protein [Ketogulonicigenium vulgare Y25]
gi|308754664|gb|ADO42593.1| SufBD protein [Ketogulonicigenium vulgare Y25]
Length = 424
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 76/357 (21%), Positives = 127/357 (35%), Gaps = 21/357 (5%)
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP----VGDNFYAA 190
+ F + T+ + GV ++ A+ E K T+ AA
Sbjct: 82 LTITFVDGVLDTSLSDLPALEGVEVDTLATALSEDAHWAKDLFGTLEAKGQVPVQRPLAA 141
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LN+A G + + + +R + F R LI +EG+ ++ LE T
Sbjct: 142 LNTAFAYSGLVLRV--KAVVETPIKIIYRQSATAADAFVRHLIWLEEGAGLTLLEVGTGA 199
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
R +V E+ D+A + Q + G S
Sbjct: 200 ARF-----NSVTEVEVADHAAFHHIRTQGRTADRQLATHMFAHL--------GQESLFKS 246
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG-FQQIDSGTKMLHLAKNTTSRIVSK 369
L T + G+ + +A+ G D + H A N SR V K
Sbjct: 247 FTLAVDGRFTRNECVIEMTGDDTSAHVAGVAVGEGRDFLHDDTIFITHDAVNCESRQVFK 306
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
+ + ++GK+ V GA + + SLL+ + P +E H +
Sbjct: 307 KVLRNAATGVFQGKILVKPGAQKTDGYQISQSLLLDEDANFLAKPELEIYADDVACSHGS 366
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLE 485
T+ I D LFY RG+P AI L+V F+ E L ++ E A + ++ + I L+
Sbjct: 367 TSGAIDDTALFYLRSRGVPHAQAIDLLVLAFLAEALDEIADEDLADDLREQLTIWLK 423
>gi|209769184|gb|ACI82904.1| hypothetical protein ECs2388 [Escherichia coli]
Length = 423
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 54/287 (18%), Positives = 96/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEVVNTAHYRHHL-ELAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFSINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENCTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|116252325|ref|YP_768163.1| iron-sulfur cluster assembly protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256973|emb|CAK08067.1| putative iron-sulfur cluster assembly protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 442
Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats.
Identities = 77/432 (17%), Positives = 137/432 (31%), Gaps = 45/432 (10%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
R P+ R A + DL + L+
Sbjct: 52 TALRDRLLDDLKKAGLPT---RRIEAWHYTDLKNLLRTVPQQAGDAGSQALEPLVDDATV 108
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
L + A V V+ + + G+ + +A+
Sbjct: 109 LAVIQGHSNQKATVDGLGVSAYS--------ERLLDGSAAGGLDALGSDDAV-------- 152
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+N + DG V +P L F T R +
Sbjct: 153 --------------GRINGSFVRDGYVVDVPADTELETPLEIQFIHAGGQT--HTRLPVS 196
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
G + +E D L + V ++ + E+ + +Q D+
Sbjct: 197 FGAGVKATVIERHLTVTGDAA-LVSHVSDITVGEGTELTWIILQQQGADDTHLG------ 249
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G +K+ + G + + + GE + I + D
Sbjct: 250 --QIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMV 307
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H NT S V + + + ++G + V A + C++LL+ ++ P
Sbjct: 308 LGHDVPNTGSTEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKP 367
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + I HL+Y + RGIPE A A++VN FV E++++L E V
Sbjct: 368 ELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELDDEALV 427
Query: 475 EAQK-LIDISLE 485
EA + +I LE
Sbjct: 428 EALEGVISAWLE 439
>gi|300918051|ref|ZP_07134672.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
gi|300414742|gb|EFJ98052.1| FeS assembly protein SufD [Escherichia coli MS 115-1]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G + S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGVVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|327393722|dbj|BAK11144.1| permease component of ABC-type transport system involved in Fe-S
cluster assembly SufD [Pantoea ananatis AJ13355]
Length = 425
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/422 (16%), Positives = 135/422 (31%), Gaps = 51/422 (12%)
Query: 56 EWR-LLAYRRWL---TMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELL 109
E R + A + W + P+ + D L +++ P++ + D L
Sbjct: 24 EMRSMQAQQHWQQLMRLGLPTRKHENWKYTPLDGLLAHHFVLPEAHELSATQVDALSLPL 83
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
+ + R Q L+ T I
Sbjct: 84 DAVRLVFVDGRFQPGLSSGDTELFE-------------------------------IQHS 112
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-- 227
++ L V + L ++ + + + + +G L + K G
Sbjct: 113 VAAERRDLPAAVQPE--IFLHLTESLAEEVTHIRLARGKAAARPLYLLHITSGKDDGMNT 170
Query: 228 -FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R + +E + +E A DNA ++++ +
Sbjct: 171 VHHRHHLQLEESAEAEVIEHFVTLND-SAHFTGARFTFAVADNARLRHTKLAFESSKSYH 229
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
++++ T G+ ++ S L GE + S+ +
Sbjct: 230 FAHN--------DIVINRDAQVTSTSFLLGAGLSRHNTSTQLNGENTQLSLNSLVLPVNQ 281
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ D+ T + H + SR + K I + G + V + A + ++LL+G
Sbjct: 282 EVADTRTYLEHNKGHCLSRQMHKTIVRDKGRAVFNGHIKVAQHALKTDGQMTNNNLLLGR 341
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H AT +I DE +FY RGI ++AA +I++ F E+ +
Sbjct: 342 LAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGIEQDAAQTMIIHAFAAELTE 401
Query: 467 KL 468
L
Sbjct: 402 TL 403
>gi|306840446|ref|ZP_07473206.1| FeS assembly protein SufD [Brucella sp. BO2]
gi|306289580|gb|EFM60795.1| FeS assembly protein SufD [Brucella sp. BO2]
Length = 425
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 77/429 (17%), Positives = 145/429 (33%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L+
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPALI-------- 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
V + S V K GV P+ EA+ + + +
Sbjct: 89 ---------------VGSSVIAASNGVALPAK---APKGVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|323697826|ref|ZP_08109738.1| SufBD protein [Desulfovibrio sp. ND132]
gi|323457758|gb|EGB13623.1| SufBD protein [Desulfovibrio desulfuricans ND132]
Length = 386
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/390 (21%), Positives = 155/390 (39%), Gaps = 13/390 (3%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
K + D + E + L ++Q ++AGV + A + + +
Sbjct: 2 SKVDLKDFKFDGLKQEAIADLNALSDADKDQLLMAGVVSDLSTRSASYLQ-MDQSAVHCQ 60
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
+ V M I +A+ ++ D +K+Y T+V + + G F+ + G +
Sbjct: 61 SRDENVEIMDIKDALKKY-DGLKEYFWTLVDKDKDEFTRSAYDNLHGGYFIRVKAGAKIK 119
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ + + + GQ L+I +EG+ + GC+ + H + E NA
Sbjct: 120 DPIQSCLMLKSENVGQNVHNLVIIEEGAEAHIITGCSVAHGTRHGAHLGISEFFVGKNAS 179
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ ++ V NW + G ++ L YPS L G
Sbjct: 180 LTFTMVHNWSDAVAVRPRSA-------GKVEEGGKFLNNYVLLKPVKDLQMYPSITLDGA 232
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ F S+ ++ +D G +++ A NT I+++ I++G + + RG +
Sbjct: 233 DAVARFNSVVVATEGSLLDMGNRVIMNAPNTRCEIIARTIASGGTIIS-RG--HIAAHNV 289
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
S+ +C L++G IP ++ L HEA+ KI+ E + Y + RG+ E+
Sbjct: 290 PSKGHLECQGLILG-GGRIWAIPELDGTVEGVELSHEASVGKIAQEEIEYLMARGMDEDE 348
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLID 481
A + IV GF+ + LP E K I+
Sbjct: 349 ATSTIVRGFLNTDIMGLPDRLQQEIDKQIE 378
>gi|261339559|ref|ZP_05967417.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
gi|288318376|gb|EFC57314.1| FeS assembly protein SufD [Enterobacter cancerogenus ATCC 35316]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 70/411 (17%), Positives = 129/411 (31%), Gaps = 46/411 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ + + L + E + + R+
Sbjct: 33 LQQLLRLGLPT---RKQENWKYTPL--------------DGLLKGEFVTRLADVNPTQRD 75
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + ++SG AI +
Sbjct: 76 ALALTLDAVRLVFVDGQFRPE-----LSDSTQESGFEV-----AINNDRQSLH------A 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN----EKGTGQFERTLIIADE 237
PV + L ++ + + + + R L ++ R I E
Sbjct: 120 PVQPEVFLHLTESLAQSVTHISVRRNQRPDKPLLLMHITQGLDGDEINTAHYRHHIELAE 179
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + +E + A + + NA++ + + P
Sbjct: 180 GAEATVIEHYVSLND-TRHFTGARLTMNVAANAQLHHIKLAFENPVSHHFAHN------- 231
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G G A+ S L GE + S+A+ + D+ T + H
Sbjct: 232 -DIALGPDGAADSHSFLLGGAVLRHNTSTQLNGENTTLCINSLAMPVKSEVCDTRTWLEH 290
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 291 NKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGLLAEVDTKPQLE 350
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I DE +FY RGI ++AA +I+ F E+ + L
Sbjct: 351 IYADDVKCSHGATVGRIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEAL 401
>gi|332343400|gb|AEE56734.1| feS assembly protein SufD [Escherichia coli UMNK88]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|320175142|gb|EFW50253.1| Iron-sulfur cluster assembly protein SufD [Shigella dysenteriae CDC
74-1112]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 99/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L + E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMYITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRNNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDE 404
>gi|333004018|gb|EGK23553.1| feS assembly protein SufD [Shigella flexneri K-218]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|323978182|gb|EGB73268.1| FeS assembly protein SufD [Escherichia coli TW10509]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|300938996|ref|ZP_07153694.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
gi|300456099|gb|EFK19592.1| FeS assembly protein SufD [Escherichia coli MS 21-1]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAHSVTHIAVKRGQRPVKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|24113070|ref|NP_707580.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 2a str. 301]
gi|30063195|ref|NP_837366.1| cysteine desulfurase activator complex subunit SufD [Shigella
flexneri 2a str. 2457T]
gi|24052043|gb|AAN43287.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30041447|gb|AAP17175.1| hypothetical protein S1843 [Shigella flexneri 2a str. 2457T]
gi|281601118|gb|ADA74102.1| putative Selenocysteine lyase [Shigella flexneri 2002017]
gi|313648963|gb|EFS13400.1| feS assembly protein SufD [Shigella flexneri 2a str. 2457T]
gi|332757001|gb|EGJ87344.1| feS assembly protein SufD [Shigella flexneri 4343-70]
gi|332757784|gb|EGJ88113.1| feS assembly protein SufD [Shigella flexneri 2747-71]
gi|332758522|gb|EGJ88843.1| feS assembly protein SufD [Shigella flexneri K-671]
gi|332766887|gb|EGJ97087.1| feS assembly protein SufD [Shigella flexneri 2930-71]
gi|333003808|gb|EGK23344.1| feS assembly protein SufD [Shigella flexneri VA-6]
gi|333017958|gb|EGK37263.1| feS assembly protein SufD [Shigella flexneri K-304]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|194438568|ref|ZP_03070657.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|253773362|ref|YP_003036193.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254161742|ref|YP_003044850.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli B str. REL606]
gi|297517141|ref|ZP_06935527.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli OP50]
gi|300930849|ref|ZP_07146219.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|194422578|gb|EDX38576.1| FeS assembly protein SufD [Escherichia coli 101-1]
gi|242377408|emb|CAQ32157.1| SufD component of SufBCD Fe-S cluster scaffold complex, subunit of
SufBCD Fe-S cluster scaffold complex [Escherichia coli
BL21(DE3)]
gi|253324406|gb|ACT29008.1| FeS assembly protein SufD [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253973643|gb|ACT39314.1| component of SufBCD complex [Escherichia coli B str. REL606]
gi|253977838|gb|ACT43508.1| component of SufBCD complex [Escherichia coli BL21(DE3)]
gi|300461324|gb|EFK24817.1| FeS assembly protein SufD [Escherichia coli MS 187-1]
gi|323962172|gb|EGB57767.1| FeS assembly protein SufD [Escherichia coli H489]
gi|323973940|gb|EGB69112.1| FeS assembly protein SufD [Escherichia coli TA007]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|157154860|ref|YP_001462975.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli E24377A]
gi|157076890|gb|ABV16598.1| FeS assembly protein SufD [Escherichia coli E24377A]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|157161146|ref|YP_001458464.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli HS]
gi|170019969|ref|YP_001724923.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ATCC 8739]
gi|188491802|ref|ZP_02999072.1| FeS assembly protein SufD [Escherichia coli 53638]
gi|157066826|gb|ABV06081.1| FeS assembly protein SufD [Escherichia coli HS]
gi|169754897|gb|ACA77596.1| FeS assembly protein SufD [Escherichia coli ATCC 8739]
gi|188487001|gb|EDU62104.1| FeS assembly protein SufD [Escherichia coli 53638]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|320184432|gb|EFW59240.1| Iron-sulfur cluster assembly protein SufD [Shigella flexneri CDC
796-83]
gi|332096005|gb|EGJ01010.1| feS assembly protein SufD [Shigella boydii 3594-74]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 99/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L + E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMYITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|331663159|ref|ZP_08364069.1| FeS assembly protein SufD [Escherichia coli TA143]
gi|331058958|gb|EGI30935.1| FeS assembly protein SufD [Escherichia coli TA143]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|301026911|ref|ZP_07190307.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
gi|300395258|gb|EFJ78796.1| FeS assembly protein SufD [Escherichia coli MS 69-1]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAHSVTHIAVKRGQRPVKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|191167839|ref|ZP_03029644.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|193068886|ref|ZP_03049845.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209918995|ref|YP_002293079.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SE11]
gi|218554247|ref|YP_002387160.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli IAI1]
gi|218695242|ref|YP_002402909.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 55989]
gi|256018125|ref|ZP_05431990.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|260855505|ref|YP_003229396.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|260868172|ref|YP_003234574.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300820072|ref|ZP_07100248.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|300821446|ref|ZP_07101593.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300924716|ref|ZP_07140662.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|307310748|ref|ZP_07590394.1| FeS assembly protein SufD [Escherichia coli W]
gi|331668365|ref|ZP_08369213.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331677552|ref|ZP_08378227.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332279170|ref|ZP_08391583.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
gi|190902098|gb|EDV61842.1| FeS assembly protein SufD [Escherichia coli B7A]
gi|192957681|gb|EDV88125.1| FeS assembly protein SufD [Escherichia coli E110019]
gi|209912254|dbj|BAG77328.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351974|emb|CAU97706.1| component of SufBCD complex [Escherichia coli 55989]
gi|218361015|emb|CAQ98590.1| component of SufBCD complex [Escherichia coli IAI1]
gi|257754154|dbj|BAI25656.1| component of SufBCD complex [Escherichia coli O26:H11 str. 11368]
gi|257764528|dbj|BAI36023.1| component of SufBCD complex [Escherichia coli O111:H- str. 11128]
gi|300419094|gb|EFK02405.1| FeS assembly protein SufD [Escherichia coli MS 182-1]
gi|300525949|gb|EFK47018.1| FeS assembly protein SufD [Escherichia coli MS 119-7]
gi|300527377|gb|EFK48439.1| FeS assembly protein SufD [Escherichia coli MS 107-1]
gi|306908926|gb|EFN39422.1| FeS assembly protein SufD [Escherichia coli W]
gi|315060986|gb|ADT75313.1| component of SufBCD complex [Escherichia coli W]
gi|323152812|gb|EFZ39082.1| feS assembly protein SufD [Escherichia coli EPECa14]
gi|323180997|gb|EFZ66535.1| feS assembly protein SufD [Escherichia coli 1180]
gi|323186046|gb|EFZ71402.1| feS assembly protein SufD [Escherichia coli 1357]
gi|323378442|gb|ADX50710.1| FeS assembly protein SufD [Escherichia coli KO11]
gi|323948024|gb|EGB44016.1| FeS assembly protein SufD [Escherichia coli H120]
gi|324016511|gb|EGB85730.1| FeS assembly protein SufD [Escherichia coli MS 117-3]
gi|324119165|gb|EGC13053.1| FeS assembly protein SufD [Escherichia coli E1167]
gi|331063559|gb|EGI35470.1| FeS assembly protein SufD [Escherichia coli TA271]
gi|331074012|gb|EGI45332.1| FeS assembly protein SufD [Escherichia coli H591]
gi|332101522|gb|EGJ04868.1| cysteine desulfurase activator complex subunit SufD [Shigella sp.
D9]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|331657655|ref|ZP_08358617.1| FeS assembly protein SufD [Escherichia coli TA206]
gi|331055903|gb|EGI27912.1| FeS assembly protein SufD [Escherichia coli TA206]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|331647172|ref|ZP_08348266.1| FeS assembly protein SufD [Escherichia coli M605]
gi|330911488|gb|EGH39998.1| iron-sulfur cluster assembly protein SufD [Escherichia coli AA86]
gi|331043955|gb|EGI16091.1| FeS assembly protein SufD [Escherichia coli M605]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|293409994|ref|ZP_06653570.1| FeS assembly protein SufD [Escherichia coli B354]
gi|291470462|gb|EFF12946.1| FeS assembly protein SufD [Escherichia coli B354]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAHSVTHIAVKRGQRPVKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|91210894|ref|YP_540880.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UTI89]
gi|117623860|ref|YP_852773.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli APEC O1]
gi|218558550|ref|YP_002391463.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli S88]
gi|218689623|ref|YP_002397835.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli ED1a]
gi|237705627|ref|ZP_04536108.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|331683188|ref|ZP_08383789.1| FeS assembly protein SufD [Escherichia coli H299]
gi|91072468|gb|ABE07349.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli UTI89]
gi|115512984|gb|ABJ01059.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Escherichia coli APEC O1]
gi|218365319|emb|CAR03040.1| component of SufBCD complex [Escherichia coli S88]
gi|218427187|emb|CAR08073.2| component of SufBCD complex [Escherichia coli ED1a]
gi|226900384|gb|EEH86643.1| cysteine desulfurase activator complex subunit SufD [Escherichia
sp. 3_2_53FAA]
gi|294493567|gb|ADE92323.1| FeS assembly protein SufD [Escherichia coli IHE3034]
gi|307626833|gb|ADN71137.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UM146]
gi|315286393|gb|EFU45829.1| FeS assembly protein SufD [Escherichia coli MS 110-3]
gi|323952188|gb|EGB48061.1| FeS assembly protein SufD [Escherichia coli H252]
gi|323956582|gb|EGB52320.1| FeS assembly protein SufD [Escherichia coli H263]
gi|331079403|gb|EGI50600.1| FeS assembly protein SufD [Escherichia coli H299]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|206579410|ref|YP_002238019.1| FeS assembly protein SufD [Klebsiella pneumoniae 342]
gi|206568468|gb|ACI10244.1| FeS assembly protein SufD [Klebsiella pneumoniae 342]
Length = 424
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/419 (16%), Positives = 138/419 (32%), Gaps = 47/419 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ + D L + G D+ + L +P+
Sbjct: 33 LQQLLRLGLPTRKHEDWKYTPLDAL--------LNGHFVADEGASLSAEQRDALALPLD- 83
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
V +D + ++L SGV ++ +++L +
Sbjct: 84 -------AWRLVFIDGRYHPE-----LSDDLAASGVEVSVDNQ---------RQHLPDAL 122
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
+ L ++ + + +P+ R L + T + L +
Sbjct: 123 HPE--VFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITRGLAGDALNTAHYRHHL-ALE 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ + +E ++ + + DNA +++ +
Sbjct: 180 SGAEATVVEHYL-SLNEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHFAHN------ 232
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + + G + + S L GE S S+A+ + DS T +
Sbjct: 233 --DLLLGRDASAFSSSFLLGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCDSRTWLD 290
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V A + ++LL+G T P +
Sbjct: 291 HQVGYCNSRQLHKTIVSDKGRAVFNGLINVAPHALKTDGQMTNNNLLLGRLAEVDTKPQL 350
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
E H AT +I +E LFY RGI ++AA +I+ F E+ + + + E
Sbjct: 351 EIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALRE 409
>gi|163843202|ref|YP_001627606.1| FeS assembly protein SufD [Brucella suis ATCC 23445]
gi|163673925|gb|ABY38036.1| FeS assembly protein SufD [Brucella suis ATCC 23445]
Length = 425
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/429 (18%), Positives = 146/429 (34%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + P L
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLLKGVAAFDTSAGTQALPAL--------- 87
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
I I+A +A A GV P+ EA+ + + +
Sbjct: 88 -IAGSSIIAASNGVALAAKAP----------------KGVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQARQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|163868340|ref|YP_001609549.1| ABC-type transport system [Bartonella tribocorum CIP 105476]
gi|161017996|emb|CAK01554.1| ABC-type transport system [Bartonella tribocorum CIP 105476]
Length = 421
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 85/455 (18%), Positives = 177/455 (38%), Gaps = 49/455 (10%)
Query: 38 EDIIRFISAKKNE-P--DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
EDII + N+ P + R A ++ T + PS + + +L S
Sbjct: 12 EDIINNFNQSINDLPGDKAVRAIRKKAIEQFQTTRLPS---RKIENWHYTNLRTLLKSVS 68
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK 154
+ L S+ AV ++ + + + K +
Sbjct: 69 NFSK---------------------AQDNRLVDTLLSESAVFSMNNGKTSTQSKKLD--- 104
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
+ +S+A+ ++ + + + ++F LN+A TDG +IP+ + + +
Sbjct: 105 -NITVKRLSDALEDNSIKIDQNI-----SDEDFIGQLNTAFVTDGWLFHIPENTKLNIPI 158
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ F I D+ S V ++E D++ +++ L +E+ +
Sbjct: 159 ELQNIQMGGQSHTFSD--IKVDKNSQVMFVEHQV--GNDQDIFISSIFSLNIAAKSEVTW 214
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
++N F R +K+S + GS + + L+GE+S
Sbjct: 215 ILIRN-------RGFNSTQFGRLR-AVLAQGAKLSLYVINIGSQLNRQEVDIELQGEESD 266
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ I + +G D + H+ + +TS + + + + ++G + V + A +
Sbjct: 267 FQLRVINLLSGQTHSDLTMTVRHVEEKSTSTEIIRNVVTDKAVGVFQGIIRVAQKAQKTD 326
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
C+SL++ N+ + P +E H AT + I+ ++LFY + RGIP + A A
Sbjct: 327 ARMACNSLILSNDAEFNAKPELEIFADDVACGHGATVANINHDYLFYLMARGIPFKTARA 386
Query: 455 LIVNGFVREVLQKLP-MEFAVEAQKLIDISLEGSV 488
L++ GF+ E++ + + +I LE +V
Sbjct: 387 LLIKGFIAELIDDITQDNIQTVLENIIGQWLEKNV 421
>gi|74311994|ref|YP_310413.1| cysteine desulfurase activator complex subunit SufD [Shigella
sonnei Ss046]
gi|73855471|gb|AAZ88178.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKMAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|312969706|ref|ZP_07783889.1| feS assembly protein SufD [Escherichia coli 1827-70]
gi|310337991|gb|EFQ03080.1| feS assembly protein SufD [Escherichia coli 1827-70]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAH 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|293446055|ref|ZP_06662477.1| FeS assembly protein SufD [Escherichia coli B088]
gi|291322885|gb|EFE62313.1| FeS assembly protein SufD [Escherichia coli B088]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 99/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA++++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAQLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLYKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|170680131|ref|YP_001743573.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli SMS-3-5]
gi|170517849|gb|ACB16027.1| FeS assembly protein SufD [Escherichia coli SMS-3-5]
Length = 423
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|290509068|ref|ZP_06548439.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
gi|289778462|gb|EFD86459.1| FeS assembly protein SufD [Klebsiella sp. 1_1_55]
Length = 424
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/419 (16%), Positives = 138/419 (32%), Gaps = 47/419 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ + D L + G D+ + L +P+
Sbjct: 33 LQQLLRLGLPTRKHEDWKYTPLDAL--------LNGHFVADEGASLSAEQRDALALPLD- 83
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
V +D + ++L SGV ++ +++L +
Sbjct: 84 -------AWRLVFIDGRYHPE-----LSDDLAASGVEVSVDNQ---------RQHLPDAL 122
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
+ L ++ + + +P+ R L + T + L +
Sbjct: 123 HPE--VFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITRGLAGDALNTAHYRHHL-ALE 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ + +E ++ + + DNA +++ +
Sbjct: 180 SGAEATVVEHYL-SFNEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHFAHN------ 232
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + + G + + S L GE S S+A+ + DS T +
Sbjct: 233 --DLLLGRDASAFSSSFLLGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCDSRTWLD 290
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V A + ++LL+G T P +
Sbjct: 291 HQVGYCNSRQLHKTIVSDKGRAVFNGLINVAPHALKTDGQMTNNNLLLGRLAEVDTKPQL 350
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
E H AT +I +E LFY RGI ++AA +I+ F E+ + + + E
Sbjct: 351 EIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALRE 409
>gi|288935007|ref|YP_003439066.1| FeS assembly protein SufD [Klebsiella variicola At-22]
gi|288889716|gb|ADC58034.1| FeS assembly protein SufD [Klebsiella variicola At-22]
Length = 424
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/419 (16%), Positives = 138/419 (32%), Gaps = 47/419 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ + D L + G D+ + L +P+
Sbjct: 33 LQQLLRLGLPTRKHEDWKYTPLDAL--------LNGHFVADEGASLSAEQRDALALPLD- 83
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
V +D + ++L SGV ++ +++L +
Sbjct: 84 -------AWRLVFIDGRYHPE-----LSDDLAASGVEVSVDNQ---------RQHLPDAL 122
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
+ L ++ + + +P+ R L + T + L +
Sbjct: 123 HPE--VFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITRGLAGDALNTAHYRHHL-ALE 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ + +E ++ + + DNA +++ +
Sbjct: 180 SGAEATVVEHYL-SFNEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHFAHN------ 232
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + + G + + S L GE S S+A+ + DS T +
Sbjct: 233 --DLLLGRDASAFSSSFLLGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCDSRTWLD 290
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V A + ++LL+G T P +
Sbjct: 291 HQVGYCNSRQLHKTIVSDKGRAVFNGLINVAPHALKTDGQMTNNNLLLGRLAEVDTKPQL 350
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
E H AT +I +E LFY RGI ++AA +I+ F E+ + + + E
Sbjct: 351 EIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALRE 409
>gi|11342548|emb|CAC17127.1| SufD protein [Erwinia chrysanthemi]
Length = 430
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/298 (18%), Positives = 106/298 (35%), Gaps = 12/298 (4%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ---FERTLIIADEG 238
P+ + L ++ + + + + GV L + + R EG
Sbjct: 125 PIQPEVFLHLTESLAAEQTLIQVDNGVTTEKPLYLLHISSGRPAALNTLHYRHHARIGEG 184
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + +E A A + + A +N+ ++ +
Sbjct: 185 ASATLIEHY-ASLEGAAHFSGARLTIDAGENSRTEHYKLGFEAADSYHFAHN-------- 235
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+++ G+ +T + S + GE S+ + G + D+ T + H
Sbjct: 236 DLRLARAAQLHSHSFLLGAGLTRHHTSAQMNGEGVTLSMNSLMVPTGNEVCDTRTYLEHN 295
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
SR + K I + + G + V GA + ++LL+G T P +E
Sbjct: 296 QGFGESRQLHKAIVRDRARGVFNGLIKVAPGALPTDGKMTNNNLLLGRLAEVDTKPQLEI 355
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +I +E LFY RGI E+AA +I+ F E+ + + + +A
Sbjct: 356 YADDVKCSHGATVGRIDEEQLFYLRSRGIGEQAAQQMIIFAFAAELTEAIRDDALRDA 413
>gi|288930588|ref|YP_003434648.1| SufBD protein [Ferroglobus placidus DSM 10642]
gi|288892836|gb|ADC64373.1| SufBD protein [Ferroglobus placidus DSM 10642]
Length = 370
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 11/327 (3%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV M I A+ E D ++ Y V + + + +G F+ + + +
Sbjct: 49 GVEVMSIKAAL-EKYDWLEDYFWKAVKKDQDEFTREADSEDVNGYFIRALPNAKIQIPVE 107
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ +G Q +IIA+E S ++ + GCT+ LH + E NA++ ++
Sbjct: 108 ACLYLRTRGHKQRVHNVIIAEENSELNIISGCTSHPGVMAGLHIGISEFFVKKNAKLTFT 167
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ +W I + IS L + YP+ L G+ S
Sbjct: 168 MIHSWES-------NIEVRPRSAAIVEENGTFISNYILMNSVKLVQMYPTAYLNGKNSQA 220
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
F S+ + ID G++ + A+N+ + IVS+ IS G RG + ++ +
Sbjct: 221 IFSSVIVGLEGANIDVGSRAVLNAENSKAEIVSRTISRGGKIVA-RG--HLVGNVSNVKG 277
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+C L++ N IP +E+ + +L HEA +I++E +FY + RG+ + AI+
Sbjct: 278 HLECRGLILAENGSIEAIPILEANHPDVDLSHEAAIGRIAEEEIFYLMSRGLSRDEAISA 337
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDI 482
IV GF+ ++ LP E K I +
Sbjct: 338 IVRGFMEVEIKGLPEALKREIDKAISL 364
>gi|302533780|ref|ZP_07286122.1| FeS assembly protein SufD [Streptomyces sp. C]
gi|302442675|gb|EFL14491.1| FeS assembly protein SufD [Streptomyces sp. C]
Length = 390
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 62/381 (16%), Positives = 128/381 (33%), Gaps = 25/381 (6%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+++ P+ T + + D +V E
Sbjct: 32 SFDVADFPVPHGREEEWRFTPLARLKGLHDGTAVANGT------MKAQIDAPEGVTVESV 85
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ + + D A S+ +PK + ++ +G F
Sbjct: 86 ERGDERIGKAGTPVDRVAAQAFSSFAKATVVT-VPKETVLAEPIRV--ALHGEGGTTFGH 142
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
T+ + + + + AA V+++ D A++ + +VQ+W
Sbjct: 143 TVFDIKPFAEAIIV-----IDHTGDGVRAANVDILVGDGAKVTFVSVQDWDDTAVHTS-- 195
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ G + + G + +P G E + ++ Q +
Sbjct: 196 ------QHNALIGRDASFKSVVVTFGGDVVRLHPRVSYAGPGGEAEMLGVYFTDAGQHQE 249
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H A + S +V KG G + + G V + + A + + +L++ +
Sbjct: 250 HRLLVTHDAPHCKSNVVYKGALQGQDAHAVWIGDVLIEKTAEGTDTYEMNRNLVLTDGAR 309
Query: 410 AHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++P +E + H + T + DE LFY RGIP + A L+V GF E++Q++
Sbjct: 310 VDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGIPADEARRLVVRGFFAELVQQI 369
Query: 469 PMEFAVE-AQKLIDISLEGSV 488
+ E I+ L +V
Sbjct: 370 GVADIEERLITKIEAELAAAV 390
>gi|288561167|ref|YP_003424653.1| FeS assembly protein SufBD [Methanobrevibacter ruminantium M1]
gi|288543877|gb|ADC47761.1| FeS assembly protein SufBD [Methanobrevibacter ruminantium M1]
Length = 407
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 15/335 (4%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA-----VFTDGSFVYIPKGVRCP 211
V M A+ ++ L K Y+ V + Y A + G FV G +
Sbjct: 82 VEVMNTGIALEKYSWL-KDYMWNAVKPDADKYTAQTALREVEEESYSGYFVRSLPGTKEV 140
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ I ++ Q +IIA+E S + + GC + + LH V E+ ++
Sbjct: 141 FPVQACMFIADQDVMQTAHNIIIAEENSELHLITGCATGEDVSSALHVGVSEMYLKPGSK 200
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
I ++ V NW + I+ L + YP+ GE
Sbjct: 201 ITFTMVHNWAEQVEVRPRTA-------ILQAENTTYINNYILTSPVNSIQSYPTTHCNGE 253
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ F SI ID G++ L A NT++ I+S+ ++ S+ RG +
Sbjct: 254 NARALFQSIQSGTKDSIIDVGSRALLNAPNTSAEIISRAVANDESSIYSRG--HLAGNVP 311
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ + +C L++ + + +P +E+ ++ + HEA +I +E ++Y RG+ EE
Sbjct: 312 NVKGHLECHGLVLDDGSSIYAVPELEANAANLEMSHEAAVGQIDEEEIYYLTSRGLTEEE 371
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
A ++IV GF+ + LP E A E Q++ID+SL+G
Sbjct: 372 AASMIVRGFLSMDITGLPDELAAETQRMIDMSLDG 406
>gi|323169249|gb|EFZ54925.1| feS assembly protein SufD [Shigella sonnei 53G]
Length = 388
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 93 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 151
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 152 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 202
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 203 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 262
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 263 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKMAEVDTKPQLEIYADDVK 322
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 323 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 369
>gi|220912602|ref|YP_002487911.1| FeS assembly protein SufD [Arthrobacter chlorophenolicus A6]
gi|219859480|gb|ACL39822.1| FeS assembly protein SufD [Arthrobacter chlorophenolicus A6]
Length = 413
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 18/309 (5%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
T+VP + A + SA + + IP + N G +I A
Sbjct: 115 TLVPA--DRAAVVASANVEEAQLIRIPADAELDQPIRVVMTGNGAGRRTNTHHVIEAGAN 172
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S + H VE+ + A++ +VQ W + +
Sbjct: 173 SRAVVILEHDGSAD-----HNGNVEVFVREGAKLTVVSVQLWEDDARH--------LAQH 219
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ + G I + GE + E + ++ Q ++ + + H
Sbjct: 220 DAEVSKDAMYKHIAVTLGGKIVRLNSNVRFAGEGADAELLGLYFADAGQHLEHRSFVDHN 279
Query: 359 AKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
N S ++ KG G + + G V + + A + ++ + +L++ + C A ++P +E
Sbjct: 280 LANCKSNVLYKGALQGKGAHTVWVGDVLIQKQAEGTDSYEKNQNLVLTDGCRADSVPNLE 339
Query: 418 SKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
+ H ++T + DEHLFY + RGIPE+ A L+V GF+ E++Q++ + E
Sbjct: 340 IETGLIEGAGHASSTGRFDDEHLFYLMARGIPEDVARRLVVRGFLNEIIQQIKVPALEER 399
Query: 476 AQKLIDISL 484
+ ++ L
Sbjct: 400 LTEAVEREL 408
>gi|333005923|gb|EGK25439.1| feS assembly protein SufD [Shigella flexneri K-272]
gi|333018832|gb|EGK38125.1| feS assembly protein SufD [Shigella flexneri K-227]
Length = 423
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E A + NA +++ + P
Sbjct: 187 EHF-VSLNGARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|297571503|ref|YP_003697277.1| FeS assembly protein SufD [Arcanobacterium haemolyticum DSM 20595]
gi|296931850|gb|ADH92658.1| FeS assembly protein SufD [Arcanobacterium haemolyticum DSM 20595]
Length = 376
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 65/320 (20%), Positives = 116/320 (36%), Gaps = 19/320 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
L V P D +A + +P+ + E +
Sbjct: 67 DSRLGRVSPPEDRTSVVEWNAFTQAHAIT-LPRDTKLEHETVIAVTGQGNTDVAPLHVYV 125
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A+ S EG + VE+V D A + + TVQ W G
Sbjct: 126 EAESHS-----EGIVVLTHNGTGRINEGVEIVVGDGAHLTFVTVQEWDEGTVHTASN--- 177
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G + + + G ++ S + +G Q I++
Sbjct: 178 -----RIRIGRDATLKHIVVSLGGSLVRVVSSVEYSAPGANVNMLGAYFVDGGQHIENRL 232
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H N S + KG G +++ + G V + + + +LL+ A +
Sbjct: 233 LVDHSVPNAISNVTYKGALQGTDAHSVWVGDVLIRPEGTGTNTYELNRNLLLTRGARADS 292
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY + RGI E+ A L+V GF E++Q++ +E
Sbjct: 293 VPNLEIETGEIEGAGHASATGRFDDEQLFYLMSRGISEDEARRLVVRGFFAELIQQIGVE 352
Query: 472 FAVEAQ--KLIDISLEGSVG 489
VEA+ + I+ L+ ++G
Sbjct: 353 -QVEAKLMQAIEAELDLTMG 371
>gi|218548733|ref|YP_002382524.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ATCC 35469]
gi|218356274|emb|CAQ88892.1| component of SufBCD complex [Escherichia fergusonii ATCC 35469]
Length = 423
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVVGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|323706197|ref|ZP_08117765.1| SufBD protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534490|gb|EGB24273.1| SufBD protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 388
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/448 (18%), Positives = 147/448 (32%), Gaps = 78/448 (17%)
Query: 36 LNEDIIRFI-----SAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYA 90
L+ + I+ I S +K E R+ Y + + P W R++ + L YY
Sbjct: 5 LDYNTIQDIIREGGSGEK-------ELRVKGYEVFSKVPMPMWKRVKIDDV---HLPYY- 53
Query: 91 APKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKE 150
+ S + +E
Sbjct: 54 ----------------------------------------------KEYKSAVIDNDAQE 67
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
L + + + + ++ + D + + A + G V
Sbjct: 68 GLVVNPLTKAFADDDLNAIKSVLARNFGV-----DEKFKNMVLAFYNTGFSVRALPNSNV 122
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
+ ++ +R + LIIA+ S ++ + + +R H ++A D A
Sbjct: 123 KLPVTINYRAVGDDDTIIDLNLIIAERLSNLTVVFDLASDKRS---FHNGFTAVIAKDGA 179
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
+ +Q + S I G + + WTQ++ GS + + L G
Sbjct: 180 SVNIVKIQRFSDDSSNFDNNI--------IITGNDATVKWTQIDLGSKVNAYDVTAELEG 231
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
S F SI + Q D ++ H+ T S + KG S +RG + + RGA
Sbjct: 232 TGSSAYFSSIFLGAYDQSHDMSYRVNHIGMRTESSVDVKGALKDKSKAVFRGNLDMKRGA 291
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
++ LL+ + IP + H A+ +I + LFY + RG+ E
Sbjct: 292 RKAKGNESEVVLLLDKTVRSDAIPALWCSEDDVQANHSASAGQIDENKLFYMMSRGLSME 351
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQK 478
A L+V V+ LP + E K
Sbjct: 352 EAKLLMVEASFNPVIDTLPSDALKETVK 379
>gi|324007049|gb|EGB76268.1| FeS assembly protein SufD [Escherichia coli MS 57-2]
Length = 423
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSSQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|297195076|ref|ZP_06912474.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721535|gb|EDY65443.1| iron-regulated ABC-type transporter [Streptomyces pristinaespiralis
ATCC 25486]
Length = 398
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 60/307 (19%), Positives = 116/307 (37%), Gaps = 20/307 (6%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V +PK + + ++ +G F ++ + +
Sbjct: 103 DRVAAQAYSSFEQATVVTVPKETQLAEPIRI--AVHGEGGTAFGHQVVELGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ + D A++ VQ+W + + G
Sbjct: 160 ----IDHTGDAVLAANVDYILGDGAKLTVVLVQDWDDKAVH--------IAQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P G E + + ++ Q + + H + S
Sbjct: 208 ASFKSVVVTFGGDVVRLHPRVSYAGTGGEAELFGLYFTDKGQHQEHRLLVDHNMPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 AVYKGALQGDDAHAVWIGDVLIRAVAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIA 327
Query: 425 -LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE--AQKLID 481
H + T + DE LFY + RGIPE A L+V GF E++Q++ + E K ID
Sbjct: 328 GAGHASATGRFDDEQLFYLMSRGIPEAEARRLVVRGFFAELVQQIGLPDVEERLLDK-ID 386
Query: 482 ISLEGSV 488
LE SV
Sbjct: 387 AELEASV 393
>gi|324113446|gb|EGC07421.1| FeS assembly protein SufD [Escherichia fergusonii B253]
gi|325497142|gb|EGC95001.1| cysteine desulfurase activator complex subunit SufD [Escherichia
fergusonii ECD227]
Length = 423
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEVVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|182677102|ref|YP_001831248.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632985|gb|ACB93759.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
Length = 444
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 79/421 (18%), Positives = 145/421 (34%), Gaps = 28/421 (6%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R + ++ P R + + DL + + + T L
Sbjct: 35 KLREENFAAFVEAGLP---HRRVESWHYTDLRTIMR----------EALPLAPVPTPAAL 81
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP-DLVK 174
++ L T V VD F T +GV ++ + + P +L+
Sbjct: 82 EGLRKDVGALTLHGTKLVLVDGAFVPELSDTV------PAGVTVHSLASVLTKGPAELLT 135
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ GD A + + P V Y + +F R+L+
Sbjct: 136 LLSGEGLGAGDAIVALNAAMMQDGIVVEVAPGAVIAEPLNLIYATASAMPVARFSRSLVA 195
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ V+ E + + D A++ ++T G I F
Sbjct: 196 VGAKASVTIAESSLGEGG-RSGQTNGCLIFSVGDEAKVNHTT---QLTGSLANSIRIDTF 251
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G + K L +G+ +T + GE++ ++ G + D+
Sbjct: 252 ----MVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGREYADTTLF 307
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ HLA + R + K I S ++GK+ V A H+ +LL+ + + P
Sbjct: 308 VEHLAPSCVGRELFKYILDEESVGVFQGKIHVAPEAQHTDGKMLSKALLLTDGVAMNNKP 367
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT +S+E +FY RG+P + A AL++ F E++ +L E A
Sbjct: 368 ELEIFADDVACAHGATCGGLSEEQIFYLQARGLPYKEAEALLLEAFAAELVDELEDEKAA 427
Query: 475 E 475
E
Sbjct: 428 E 428
>gi|116753848|ref|YP_842966.1| SufBD protein [Methanosaeta thermophila PT]
gi|116665299|gb|ABK14326.1| SufBD protein [Methanosaeta thermophila PT]
Length = 403
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 84/405 (20%), Positives = 169/405 (41%), Gaps = 27/405 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
P +D ++ Y K QS+++V E+ R +G+ + ++ A +Q + V A
Sbjct: 20 PDVDLEE--YEVEAKPHDEVQSIEEVPEEVRRAALGVGVSLEDEVGGAYIQMDQTPVVA- 76
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
G+ + I+ A+ ++ D +K Y +VPV + Y A +
Sbjct: 77 ------------SSSTEGIEVLDIATALKKY-DGLKDYWWKLVPVDQDKYTADVALHPPA 123
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G F+ +G + L + + + Q +IIA+EGS + + GCT P + LH
Sbjct: 124 GYFLRARRGAKTIFPLKSCLYLGQTNLNQRVHNIIIAEEGSELHVITGCTTPSHVQRGLH 183
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
V E A + ++ + NW G + + T +
Sbjct: 184 LGVSEFFIKKGAHVSFTMIHNWGREVEVRPRTA-------IYMEGGATLSNNYICLTPAK 236
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP +L G + F ++ + +D+G++++ A ++ +++ +S G
Sbjct: 237 TLQTYPKAILDGPGAVASFNTVLYAKEG-HLDTGSEVVLRAPGCSADSITRAVSVGGEII 295
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
T RG + + +C L++ +IP ++ + ++ HEA KIS++
Sbjct: 296 T-RG--KMVGEVPDVKAHLECVGLILSEKGRIDSIPELDGRCGGLDMSHEAAVGKISEQE 352
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
L Y + RG+ ++ A +IV GF+ ++ LP E ++++ +
Sbjct: 353 LEYLMARGLTKDQATGVIVRGFLDVEIKGLPESLRDELRRIMQLQ 397
>gi|307326007|ref|ZP_07605205.1| FeS assembly protein SufD [Streptomyces violaceusniger Tu 4113]
gi|306888229|gb|EFN19217.1| FeS assembly protein SufD [Streptomyces violaceusniger Tu 4113]
Length = 389
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 61/307 (19%), Positives = 115/307 (37%), Gaps = 18/307 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V +PK + ++ +G F +I + +
Sbjct: 98 DRVAAQAYSSFEKASVVSVPKETVLTEPVRI--AVHGEGGTAFGHQVIEVGAFAEAVVV- 154
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
AA +E + D A++ +VQ+W V + G
Sbjct: 155 ----IDHTGAATVAANMEYLIGDGAKLTVVSVQDWDDTAVH--------VGQHTALVGRD 202
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P + E Y + ++ Q + + H + S
Sbjct: 203 ATFKSVVVTFGGDLVRLHPRVVYGAPGGEAELYGVYFTDNGQHQEHRLFIDHDTPHCRSN 262
Query: 366 IVSKGISAGF-SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+ KG G ++ + G V + A + + +L++ + ++P +E +
Sbjct: 263 VAYKGALQGKEAHAVWIGDVLIRAAAEGTDTYELNRNLVLTDGARVDSVPNLEIETGEIV 322
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY + RGIP + A L+V GF E++Q++ + E I+
Sbjct: 323 GAGHASATGRFEDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGIPDLEERLIAKIEA 382
Query: 483 SLEGSVG 489
LE SVG
Sbjct: 383 ELEASVG 389
>gi|193065302|ref|ZP_03046374.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194429495|ref|ZP_03062017.1| FeS assembly protein SufD [Escherichia coli B171]
gi|260843987|ref|YP_003221765.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|192927096|gb|EDV81718.1| FeS assembly protein SufD [Escherichia coli E22]
gi|194412459|gb|EDX28759.1| FeS assembly protein SufD [Escherichia coli B171]
gi|257759134|dbj|BAI30631.1| component of SufBCD complex [Escherichia coli O103:H2 str. 12009]
gi|323163469|gb|EFZ49295.1| feS assembly protein SufD [Escherichia coli E128010]
Length = 423
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPFLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|323968448|gb|EGB63854.1| FeS assembly protein SufD [Escherichia coli M863]
gi|327252798|gb|EGE64452.1| feS assembly protein SufD [Escherichia coli STEC_7v]
Length = 423
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+ + + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLVMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|293414997|ref|ZP_06657640.1| FeS assembly protein SufD [Escherichia coli B185]
gi|291432645|gb|EFF05624.1| FeS assembly protein SufD [Escherichia coli B185]
Length = 423
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|319408612|emb|CBI82267.1| ABC-type transport system [Bartonella schoenbuchensis R1]
Length = 422
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 157/412 (38%), Gaps = 46/412 (11%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + PS + + +L S + + + LL
Sbjct: 36 IRKQAIELFQKTGLPS---RKIENWHYTNLRTLLKSISDFSEINNEQLIDALLAENIVFS 92
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I + + + GVI +++A+ E+ + +
Sbjct: 93 IENGKIRTSSQIA--------------------------GVIVESLADALKENHAKINQ- 125
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
V +F A LN+A TDG IP+ + + + F I
Sbjct: 126 ----VTTDKDFIAQLNTAFVTDGWLFQIPENTKLDNPIELQNIQMGGQSHIFSE--IKIG 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ S + +E +++ +++ L A + + + + +++ +Q
Sbjct: 180 KNSQATIIER--QIGGNKDTFASSIFSLHAAEYSNVTWILIRDRGFDSTQFS-------- 229
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ +++S + GS + + L+G++S + +I + +G D +
Sbjct: 230 RFHAVLDKNAQLSLYVVNIGSQLNRQEIDIELQGQESNFQLRAINLLSGQTHSDLTMTVR 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ + +TS + + + + ++G + V + A ++ C+SL++ ++ + P +
Sbjct: 290 HIEEKSTSTEIIRNVVTDKAYGAFQGMIHVAQKAQNTDARMACNSLILSDDAQFNAKPEL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E + H AT +KI+ E+LFY + RGIP + A L+V GF+ E++ +
Sbjct: 350 EIFADNVACGHGATVAKINHEYLFYLMARGIPLKIARELLVKGFISELIDDI 401
>gi|327191055|gb|EGE58108.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
Length = 424
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 74/432 (17%), Positives = 139/432 (32%), Gaps = 45/432 (10%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
R P+ R A + D + D L+
Sbjct: 34 TALRDRLLDDLKKAGLPT---RRIEAWHYTDFKNLLRGLPSQAGDAGSDPLEPLVAGSSV 90
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
L + A + V+ + + ++ G+ + +A+
Sbjct: 91 LAVIQGHANQKAAAEGLGVSAYS--------ESLRDGSAAGGLDALGGDDAV-------- 134
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+N + DG V +P L F T R +
Sbjct: 135 --------------GRINGSFVRDGYVVDVPDNTDLEDPLEIQFIHAGGQT--HTRLPVS 178
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
G + +E A D + + + ++ E+ + +Q D+
Sbjct: 179 FGAGVQATVIERHRAVTGDAAFV-SHISDITVGKGTELTWIILQQQGADDAHLG------ 231
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G +K+ + G + + + GE + I + D
Sbjct: 232 --QIRIDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMV 289
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H +T S V + + + ++G + V A + C++LL+ ++ P
Sbjct: 290 LGHDVPHTGSTEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKP 349
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + I HL+Y + RGIPE A A++VN FV E++++L E V
Sbjct: 350 ELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALV 409
Query: 475 EAQK-LIDISLE 485
EA + +I LE
Sbjct: 410 EALEGVISAWLE 421
>gi|110641802|ref|YP_669532.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli 536]
gi|300987769|ref|ZP_07178347.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|110343394|gb|ABG69631.1| SufD protein [Escherichia coli 536]
gi|300306057|gb|EFJ60577.1| FeS assembly protein SufD [Escherichia coli MS 200-1]
gi|324011454|gb|EGB80673.1| FeS assembly protein SufD [Escherichia coli MS 60-1]
Length = 423
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDE 404
>gi|62289874|ref|YP_221667.1| hypothetical protein BruAb1_0942 [Brucella abortus bv. 1 str.
9-941]
gi|82699801|ref|YP_414375.1| hypothetical protein BAB1_0950 [Brucella melitensis biovar Abortus
2308]
gi|189024116|ref|YP_001934884.1| hypothetical protein BAbS19_I08890 [Brucella abortus S19]
gi|237815368|ref|ZP_04594366.1| FeS assembly protein SufD [Brucella abortus str. 2308 A]
gi|254697313|ref|ZP_05159141.1| hypothetical protein Babob28_06242 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730211|ref|ZP_05188789.1| hypothetical protein Babob42_03161 [Brucella abortus bv. 4 str.
292]
gi|260545382|ref|ZP_05821123.1| FeS assembly protein SufD [Brucella abortus NCTC 8038]
gi|260757900|ref|ZP_05870248.1| FeS assembly protein SufD [Brucella abortus bv. 4 str. 292]
gi|260761722|ref|ZP_05874065.1| FeS assembly protein SufD [Brucella abortus bv. 2 str. 86/8/59]
gi|62196006|gb|AAX74306.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615902|emb|CAJ10906.1| Protein of unknown function UPF0051 [Brucella melitensis biovar
Abortus 2308]
gi|189019688|gb|ACD72410.1| hypothetical protein BAbS19_I08890 [Brucella abortus S19]
gi|237790205|gb|EEP64415.1| FeS assembly protein SufD [Brucella abortus str. 2308 A]
gi|260096789|gb|EEW80664.1| FeS assembly protein SufD [Brucella abortus NCTC 8038]
gi|260668218|gb|EEX55158.1| FeS assembly protein SufD [Brucella abortus bv. 4 str. 292]
gi|260672154|gb|EEX58975.1| FeS assembly protein SufD [Brucella abortus bv. 2 str. 86/8/59]
Length = 425
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 73/429 (17%), Positives = 145/429 (33%), Gaps = 53/429 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS R + + D + + ++
Sbjct: 40 RDTALEALKVQGLPS---RRIESWHYTDFRTLL----------------QGVAAFDTSAG 80
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
++AG + + GV P+ EA+ + + +
Sbjct: 81 TQALPALIAGSSIIAASNGVALAAK----------APKGVSLTPVREALADGSLVSQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L N R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D A+I + ++++ + +
Sbjct: 185 NVKGTIIER--QNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA- 412
Query: 478 KLIDISLEG 486
LEG
Sbjct: 413 ------LEG 415
>gi|294626269|ref|ZP_06704872.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292599415|gb|EFF43549.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 420
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 78/435 (17%), Positives = 152/435 (34%), Gaps = 38/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DARRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPTLVDAAALD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP ++ G + ++ + + T L D ++
Sbjct: 68 DIPSPRLVLVNGRPSEALSDLSTLPEGVQLDTLSASLAA---------------SDQAQQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLI 233
L D +A LN+A+ +G + + G + + L F E+ R LI
Sbjct: 113 LLGRRFDGSDEVFARLNAALADEGVLIRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + A + ++ +Q G +
Sbjct: 173 ELRAGAALQVIEHHL-HVGDAAHLENSVMHVHLAQGAALSHARMQ-------AGSAHATS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 225 LL-RTDAVLARDARYQRVDLELGAGLSRHELNVRLEGNNAQLAANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLP---- 399
Query: 474 VEAQKLIDISLEGSV 488
++ + L+ ++
Sbjct: 400 AALSAVLALQLDRAL 414
>gi|284921602|emb|CBG34674.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Escherichia coli 042]
Length = 423
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIVVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|331653081|ref|ZP_08354086.1| FeS assembly protein SufD [Escherichia coli M718]
gi|331049179|gb|EGI21251.1| FeS assembly protein SufD [Escherichia coli M718]
Length = 423
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|86357865|ref|YP_469757.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
gi|86281967|gb|ABC91030.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
Length = 424
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 75/432 (17%), Positives = 140/432 (32%), Gaps = 45/432 (10%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
R P+ R A + D I + D L+
Sbjct: 34 TALRDRLLDDLKKAGLPT---RRIEAWHYTDFKNLLRGLPIQAGDAGSDPLEPLVAGSSV 90
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
L + A + V+ + + ++ G+ + +A+
Sbjct: 91 LAVIQGHANQKAAAEGLGVSAYS--------ESLRDGSAAGGLDALGSDDAV-------- 134
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+N + DG V +P L F T R +
Sbjct: 135 --------------GRINGSFVRDGYVVDVPDDTELEDPLEIQFIHAGGQT--HTRLPVS 178
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
G + +E A D + + + ++ E+ + +Q D+
Sbjct: 179 FGAGVKATVIERHRAVTGDAAFV-SHISDITVGKGTELTWIILQQQGADDTHLG------ 231
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G +K+ + G + + + GE + I + D
Sbjct: 232 --QIRVDLGTDAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMV 289
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H +T S V + + + ++G + V A + C++LL+ ++ P
Sbjct: 290 LGHDVPHTGSTEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKP 349
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + I HL+Y + RGIPE A A++VN FV E++++L E V
Sbjct: 350 ELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVSEIVEELEDEALV 409
Query: 475 EAQK-LIDISLE 485
EA + +I LE
Sbjct: 410 EALEGVISAWLE 421
>gi|309793447|ref|ZP_07687874.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
gi|308123034|gb|EFO60296.1| FeS assembly protein SufD [Escherichia coli MS 145-7]
Length = 423
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVFRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|194434787|ref|ZP_03067037.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|194416956|gb|EDX33075.1| FeS assembly protein SufD [Shigella dysenteriae 1012]
gi|320181293|gb|EFW56212.1| Iron-sulfur cluster assembly protein SufD [Shigella boydii ATCC
9905]
gi|332093953|gb|EGI99006.1| feS assembly protein SufD [Shigella dysenteriae 155-74]
Length = 423
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|289664560|ref|ZP_06486141.1| FeS assembly protein SufD [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 420
Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats.
Identities = 77/416 (18%), Positives = 145/416 (34%), Gaps = 34/416 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DARRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPALVDAAALD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP + G + ++ + G+ S ++ D ++
Sbjct: 68 DIPSPRLVFVNGRPSEALSDLSPL--------------PDGMQLDTFSASLAAGDDA-QQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
L D +A LN+A+ +G V + G + + L F R LI
Sbjct: 113 LLGRRFDGSDEIFARLNAALADEGVLVRVRDGAQIELPLHLVFVSVTGEHDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + +A + ++ +Q +
Sbjct: 173 EVRAGAALQVVEHHL-HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHATS------- 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG +Q+D+
Sbjct: 225 -LLRTDAVLARNARYQRVDLELGAGLSRHELNVRLEGSNAQLTANGVLLGNGRRQVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEEAQRLLSAAFCHEPLRVLP 399
>gi|257055644|ref|YP_003133476.1| Iron-regulated ABC transporter permease protein SufD
[Saccharomonospora viridis DSM 43017]
gi|256585516|gb|ACU96649.1| Iron-regulated ABC transporter permease protein SufD
[Saccharomonospora viridis DSM 43017]
Length = 389
Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats.
Identities = 62/337 (18%), Positives = 124/337 (36%), Gaps = 18/337 (5%)
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTV--VPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
+G + + A + V + + + V + AA + F + V +PK +
Sbjct: 61 AATGEVKIDAETAPEVTVETVGRDDARLGEAGVPSDRIAAQAYSSFQTATVVTVPKNTKA 120
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
+G + + A+ + + + + VE V D A
Sbjct: 121 SKPSVVRVNGPGEGKTAYGHLQVRAEPFAEAAVVLDHVGSGTYADN-----VEFVIGDGA 175
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++ +VQ+W V+++ G +++ + + P+ G
Sbjct: 176 QLTVVSVQDWADDAVH--------VSEQHLRLGRDARLKHIVVTLSGDLVRVSPTATFAG 227
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRG 389
E + ++ Q + + H + +S ++ KG + + G V +
Sbjct: 228 PGGDVEMLGLYFADAGQHQEHRLFVDHAVPHCSSNVLYKGALQGDDARTVWIGDVLIRAA 287
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIP 448
A + F +L++ + A ++P +E + H +TT + DE LFY RGI
Sbjct: 288 AEGTETFELNRNLVLTDGARADSVPNLEIETGEIAKAGHASTTGRFDDEQLFYLQSRGIE 347
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
EE A L+V GF E+L K+ + E + I+ L
Sbjct: 348 EEEARRLVVRGFFYEILMKIDIPEVRERLEAAIEDEL 384
>gi|187730455|ref|YP_001880441.1| cysteine desulfurase activator complex subunit SufD [Shigella
boydii CDC 3083-94]
gi|187427447|gb|ACD06721.1| FeS assembly protein SufD [Shigella boydii CDC 3083-94]
Length = 423
Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 99/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L + E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMYITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPLLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|32307516|gb|AAP79163.1| plastid protein ycf24 [Bigelowiella natans]
Length = 313
Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats.
Identities = 140/304 (46%), Positives = 196/304 (64%), Gaps = 16/304 (5%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+ YKY ++ + + K LN + ++ IS K EP W++++RL A + P W+
Sbjct: 24 TESYKYKLKSFSECETIRKSLNSNTLKSISLKNLEPLWIIKFRLDALKSLYNRDTPKWSE 83
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAV 135
D ++ YY+A L++ L E I++ K A+
Sbjct: 84 FNSYNFDINNSIYYSA----------------LIKKDTALVSSNNETSIISSSSKKKTAI 127
Query: 136 DAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAV 195
D V DS+S+ T++++EL K GVIF +S ++ + DL+ ++ +VV + DN+Y +LNSAV
Sbjct: 128 DLVLDSISIDTSYQKELGKHGVIFTNLSNSLKNYSDLISNFMGSVVSLRDNYYTSLNSAV 187
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F++GSF+YIP + CP++LSTYFRIN GQFERTLI+ ++ + V+YLEGCTAP EN
Sbjct: 188 FSEGSFIYIPANLVCPLDLSTYFRINGNVIGQFERTLIVTEKNASVTYLEGCTAPYFTEN 247
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
QLHAAVVEL A + +EIKYSTVQNWYPGDS GKGGI+NFVTKRG C G RSKISWTQ+ET
Sbjct: 248 QLHAAVVELCAEEGSEIKYSTVQNWYPGDSMGKGGIFNFVTKRGLCNGSRSKISWTQVET 307
Query: 316 GSAI 319
GS++
Sbjct: 308 GSSL 311
>gi|332090821|gb|EGI95913.1| feS assembly protein SufD [Shigella boydii 5216-82]
Length = 423
Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|218705179|ref|YP_002412698.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli UMN026]
gi|293405179|ref|ZP_06649171.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298380822|ref|ZP_06990421.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300898538|ref|ZP_07116871.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
gi|218432276|emb|CAR13166.1| component of SufBCD complex [Escherichia coli UMN026]
gi|291427387|gb|EFF00414.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli FVEC1412]
gi|298278264|gb|EFI19778.1| Fe-S cluster assembly protein SufD [Escherichia coli FVEC1302]
gi|300357802|gb|EFJ73672.1| FeS assembly protein SufD [Escherichia coli MS 198-1]
Length = 423
Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAHSVTHIAVKRGQRPVKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSYLLGGAVLRHNTSSQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|269104612|ref|ZP_06157308.1| iron-sulfur cluster assembly protein SufD [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161252|gb|EEZ39749.1| iron-sulfur cluster assembly protein SufD [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 423
Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 75/433 (17%), Positives = 137/433 (31%), Gaps = 45/433 (10%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYY-YAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
+++ L + P+ F + Y P P + +L
Sbjct: 30 WKKVLELGLPTRCDED---WKFTPFNFLYELPWHDRVPLVQRRIPKDL------------ 74
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK--SGVIFMPISEAICEHPDLVKKYLS 178
S + + V+ V + +++EL GV + D +
Sbjct: 75 ----------SYLGSEDVYRMVFINGCWQKELSDSVCGVDISVL------KGDDISTESL 118
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KGTGQFERTLIIADE 237
V P+ + L A+ T + V L I+ G R
Sbjct: 119 AVDPLDNEIVVELTEALKTQMVKFTVAPKVILDKPLCIIHYIDSFDGAVCAMRHHYQLGR 178
Query: 238 GSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
S V +E ++ + + + A D A+ +Y +
Sbjct: 179 LSQVKIIEHHVNLSEVSHKGVVFSNTSIEAQDGAQGEYIKIVEQGNEQLHLAHN------ 232
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ ++ + S L GE E S+++ Q DS T +
Sbjct: 233 --HIVTNRDANVTSSAYLLSGKWIRHKTSSELGGENGVVEMNSLSLPARDQCFDSRTYLN 290
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + S + K ++ + G + V GA + +LLIG+ ++ P +
Sbjct: 291 HSVSHCRSHQLHKMVAVDDGKGVFDGLIYVSPGALKTDGQMDNHNLLIGDKAQINSQPKL 350
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
E H ATT ++ E +FY RGI +E A +I+ F +EV + E
Sbjct: 351 EIYADDVKCSHGATTGQLDQEQIFYLQARGIKKELAERMIIKAFAKEVCDLVSFEPIRRY 410
Query: 476 AQKLIDISLEGSV 488
++ LE S+
Sbjct: 411 LLDHVEKKLEQSL 423
>gi|22125829|ref|NP_669252.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis KIM 10]
gi|45441979|ref|NP_993518.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis biovar Microtus str. 91001]
gi|108807741|ref|YP_651657.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Antiqua]
gi|108812018|ref|YP_647785.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Nepal516]
gi|145598050|ref|YP_001162126.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Pestoides F]
gi|162421329|ref|YP_001607000.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis Angola]
gi|165927487|ref|ZP_02223319.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939482|ref|ZP_02228028.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011824|ref|ZP_02232722.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210931|ref|ZP_02236966.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400942|ref|ZP_02306448.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422191|ref|ZP_02313944.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424946|ref|ZP_02316699.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229837926|ref|ZP_04458085.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895086|ref|ZP_04510262.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|229898487|ref|ZP_04513632.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902330|ref|ZP_04517450.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|270490490|ref|ZP_06207564.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|284987069|ref|YP_002347366.2| cysteine desulfurase activator complex subunit SufD [Yersinia
pestis CO92]
gi|294503595|ref|YP_003567657.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|21958758|gb|AAM85503.1|AE013796_6 hypothetical protein y1937 [Yersinia pestis KIM 10]
gi|45436842|gb|AAS62395.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Yersinia pestis biovar
Microtus str. 91001]
gi|108775666|gb|ABG18185.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Nepal516]
gi|108779654|gb|ABG13712.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Antiqua]
gi|145209746|gb|ABP39153.1| Iron-regulated ABC transporter permease protein SufD [Yersinia
pestis Pestoides F]
gi|162354144|gb|ABX88092.1| FeS assembly protein SufD [Yersinia pestis Angola]
gi|165912531|gb|EDR31162.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920542|gb|EDR37819.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989289|gb|EDR41590.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208111|gb|EDR52591.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166959003|gb|EDR56024.1| FeS assembly protein SufD [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049795|gb|EDR61203.1| FeS assembly protein SufD [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056133|gb|EDR65911.1| FeS assembly protein SufD [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680665|gb|EEO76761.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|229688035|gb|EEO80106.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694292|gb|EEO84339.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701848|gb|EEO89871.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|262361637|gb|ACY58358.1| hypothetical protein YPD4_1450 [Yersinia pestis D106004]
gi|262365621|gb|ACY62178.1| hypothetical protein YPD8_1495 [Yersinia pestis D182038]
gi|270338994|gb|EFA49771.1| FeS assembly protein SufD [Yersinia pestis KIM D27]
gi|294354054|gb|ADE64395.1| hypothetical protein YPZ3_1485 [Yersinia pestis Z176003]
gi|320015056|gb|ADV98627.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 441
Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 99/289 (34%), Gaps = 13/289 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTLIIADEGSYVSYLE 245
L ++ + + +P G L + + R ++ + + +E
Sbjct: 146 HLTESLAQERLHIRLPVGQHSDKSLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIE 205
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
++ A + + DNAE+ + + P G
Sbjct: 206 HF-VSLNEQPHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHN--------DLVLGRD 256
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
++ G+ +T S L GE S S+ + G + D+ T + H + SR
Sbjct: 257 ARARSHSFLLGAGLTRHNTSSQLNGEGSSLSMNSLLLPVGREICDTRTYLEHNKGHCESR 316
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K + + G + V + A + ++LL+ + T P +E
Sbjct: 317 QLHKVMVRERGKAIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKC 376
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
H AT +I E LFY RGI + A +I+ F EV + + E
Sbjct: 377 SHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIR 425
>gi|212712080|ref|ZP_03320208.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
gi|212685602|gb|EEB45130.1| hypothetical protein PROVALCAL_03159 [Providencia alcalifaciens DSM
30120]
Length = 435
Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 57/301 (18%), Positives = 101/301 (33%), Gaps = 18/301 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK------GTGQ 227
+ +L V + L + + + L + Q
Sbjct: 127 QDWLPDAVSSE--IFLHLTECLAVQPLIIQLAANKVAAKPLYLLNISSSSHDPEAMNMSQ 184
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+ L S +E D+ L + + DN + + +
Sbjct: 185 YRYHL-TLGNNSQSHVIEHF-VSLDDQPHLTGGRLTVEVGDNVQFTHFKLMTENASAQHF 242
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
G S + + G+ +T + S L GE + E S+ + G +
Sbjct: 243 AHN--------DIIVGRDSVVKSSSFLLGAGLTRHHTSSRLEGENTEFELNSLLLPQGNE 294
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D+ + + H A +S + K I+ S + G + V A + ++LL+G
Sbjct: 295 IADTRSYLEHNAGYCSSHQLHKVIAMDSSKAVFNGMIKVAPNALKTDGQMTNNTLLLGEK 354
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
T P +E H AT +I DE LFY RGI +AA +I+N F E+ +
Sbjct: 355 AEIDTKPQLEIYADDVKCGHGATVGRIDDEQLFYLRSRGIDSQAAKQMIINAFAAELTES 414
Query: 468 L 468
+
Sbjct: 415 I 415
>gi|238060118|ref|ZP_04604827.1| FeS assembly protein sufD [Micromonospora sp. ATCC 39149]
gi|237881929|gb|EEP70757.1| FeS assembly protein sufD [Micromonospora sp. ATCC 39149]
Length = 401
Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats.
Identities = 61/317 (19%), Positives = 119/317 (37%), Gaps = 19/317 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ +V+ D A L V + + + + F T +
Sbjct: 97 DPRVGSVLTPVDRVSA-LAYGEAGQALLVEVARDAVVAEPVRLRVVGDGAEGLAFGHTFV 155
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ V+ + + VE+ D A + TV +W Q +
Sbjct: 156 DVGRFAEVTLVLEHVGSATLADN-----VEVSVGDGARLTLVTVADWAADAVQAQHL--- 207
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G +++ Q+ G + +Y S G E Y + ++G Q ++
Sbjct: 208 -----RIRLGRDARVVHVQVSLGGDLVRQYTSVEYTGRGGEAELYGLYFADGGQHLEHRQ 262
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H + S + +G G ++ + G V + A + + +LL+ + A +
Sbjct: 263 LVDHNVPDCRSYVGYRGALQGADAHTVWVGDVLIRAEATGTDTYEINRNLLLSDGARADS 322
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY + RGIPE A L+V GF E++ K+P+E
Sbjct: 323 VPNLEIETGEIAGAGHASATGRFDDEQLFYLMARGIPENEARRLVVRGFFAELINKIPVE 382
Query: 472 FAVEAQKLIDISLEGSV 488
E ++ + ++E +
Sbjct: 383 ---ELRERLGDAIEARL 396
>gi|328881603|emb|CCA54842.1| Iron-sulfur cluster assembly protein SufD [Streptomyces venezuelae
ATCC 10712]
Length = 393
Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats.
Identities = 59/306 (19%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V + K + ++ +G F +I + +
Sbjct: 103 DRVAAQAYSSFEKASVVTVAKEAVLTEPIRV--TVHGEGGVAFGHQVIELGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ V D A++ +VQ+W V + G
Sbjct: 160 ----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDEKAVH--------VAQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P E + + ++ Q + + H + S
Sbjct: 208 ASFKSVVVTFGGDVVRIHPRVSYAAPGGEAELFGLYFTDAGQHQEHRLLVDHNTPHCKSN 267
Query: 366 IVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ KG G + + G V + A + + +L++ + ++P +E +
Sbjct: 268 VAYKGALQGQDAHAVWIGDVLIQAAAEGTDTYELNRNLVLTDGARVDSVPNLEIETGEIA 327
Query: 425 -LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY + RGIP+ A L+V GF E++Q++ + E I+
Sbjct: 328 GAGHASATGRFDDEQLFYLMSRGIPQAEARRLVVRGFFAELVQQIGLPDVEERLIAKIEA 387
Query: 483 SLEGSV 488
LE SV
Sbjct: 388 ELEASV 393
>gi|239978827|ref|ZP_04701351.1| hypothetical protein SalbJ_05300 [Streptomyces albus J1074]
gi|291450710|ref|ZP_06590100.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
gi|291353659|gb|EFE80561.1| iron-regulated ABC-type transporter [Streptomyces albus J1074]
Length = 399
Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats.
Identities = 63/335 (18%), Positives = 117/335 (34%), Gaps = 19/335 (5%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V E + D A SA S V +PK R +
Sbjct: 81 VEISTPDGVTQETVGRDDARVGRAGKPVDRVAAQAYSAF-EKASVVTVPKEARPEEPIRI 139
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
++ +G + +I + + + + AA V+ V D A++
Sbjct: 140 --TVHGEGGTAYAHQVIELGAFAEAVVV-----IDHTGDAVLAANVDYVLGDGAKLTVVA 192
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
VQ+W V + G + + G + +P E
Sbjct: 193 VQDWDDNAVH--------VAQHNTLVGRDASFKSVVVTFGGDLVRLHPRVSYASTGGSAE 244
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRN 395
+ ++ Q + + H + +S +V KG ++ + G V + A +
Sbjct: 245 LIGLYFTDQGQHQEHRLLVDHNQPHCSSNVVYKGALQGDDAHAVWIGDVLIEAAAEGTDT 304
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L++ + ++P +E + H + T + DE LFY + RGIPE A
Sbjct: 305 YEMNRNLVLTDGARVDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEADARR 364
Query: 455 LIVNGFVREVLQKLPMEFAVE-AQKLIDISLEGSV 488
L+V GF E++Q++ + E I+ LE +V
Sbjct: 365 LVVRGFFAELVQQIGLPDVEERLLAKIEAELEAAV 399
>gi|323169994|gb|EFZ55650.1| feS assembly protein SufD [Escherichia coli LT-68]
Length = 423
Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S +A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINRLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|147669380|ref|YP_001214198.1| SufBD protein [Dehalococcoides sp. BAV1]
gi|146270328|gb|ABQ17320.1| SufBD protein [Dehalococcoides sp. BAV1]
Length = 411
Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats.
Identities = 87/402 (21%), Positives = 166/402 (41%), Gaps = 25/402 (6%)
Query: 84 DDL---YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
DD+ Y ++ ++ E + G+ + + + +G D
Sbjct: 26 DDILLEKYTDNTEAHKYVNKPSELASEDKARMLESGVILDDLKERSGT-------YIQMD 78
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
+ V + +++ G+ M SEA ++ D +K Y V V + Y A DG
Sbjct: 79 NHPVHFSAQQD----GIEIMSTSEAAKKY-DWLKDYWWKAVSVDADKYTAHVELNQADGY 133
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
F+ GV+ + + + + + Q +IIA+EGS + + GCT+ R E LH
Sbjct: 134 FIRALPGVKTEFPVQSCMYMAKNQSIQNVHNIIIAEEGSELHIITGCTSAHRTETGLHLG 193
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
V E A++ ++ + W P + +S +
Sbjct: 194 VTEFYIKKGAKVTFTMIHTWSPDIAVRPRTG-------AIVEENGVFLSNYVIMKTVKNL 246
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
YP L GE + F S+ + ++D G+++ AK+T + ++++ ++ G +
Sbjct: 247 QSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNAKHTRTELITRALTTGGEIIS- 305
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG + + +C L++G+ + IP + + S +L HEA KI++E +
Sbjct: 306 RG--YIEGKVPDCKGHLECRGLILGDKGIIYAIPELMGRVSGVDLSHEAAVGKIAEEEVE 363
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
Y + RG+ ++ A A IV GF+ ++ LP E K I +
Sbjct: 364 YLMARGLNKDEATAAIVRGFLNVDIEGLPPLLKEEMDKAIKL 405
>gi|153009583|ref|YP_001370798.1| FeS assembly protein SufD [Ochrobactrum anthropi ATCC 49188]
gi|151561471|gb|ABS14969.1| FeS assembly protein SufD [Ochrobactrum anthropi ATCC 49188]
Length = 425
Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats.
Identities = 75/419 (17%), Positives = 139/419 (33%), Gaps = 46/419 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS + DF L AP
Sbjct: 40 RDAALETLKENGIPSRRVESWHYTDFRTLLKGVAPFDAA--------------------- 78
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
AG Q + + + GV P+ EA+ + + +
Sbjct: 79 --------AGTQALPALIAGSSIAATSNGVALAAKAPEGVSLTPVREALADGSLVTQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I L R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADDTELEAPLELQNIQKAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D AEI + ++++ +
Sbjct: 185 NVKGTIVER--QNGGEGDAFSTSVNHVTVGDGAEILWIILRDFGQATQLSQFNAT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G SK++ + G + + + GE S E + + D + H
Sbjct: 238 ----IGKGSKLTLYIVNAGGKLVRQEVHVNVTGEDSDFELRGLNLLADDTHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ ++ P +E
Sbjct: 294 LVENTRSTQIIRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDDGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA 412
>gi|71274756|ref|ZP_00651044.1| FeS assembly protein SufD [Xylella fastidiosa Dixon]
gi|71901188|ref|ZP_00683291.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
gi|170730001|ref|YP_001775434.1| ABC transporter membrane protein [Xylella fastidiosa M12]
gi|71164488|gb|EAO14202.1| FeS assembly protein SufD [Xylella fastidiosa Dixon]
gi|71729032|gb|EAO31160.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
gi|167964794|gb|ACA11804.1| ABC transporter membrane protein [Xylella fastidiosa M12]
Length = 422
Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats.
Identities = 68/408 (16%), Positives = 131/408 (32%), Gaps = 34/408 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A P +R + L P + +DP L T I
Sbjct: 20 RRQALEDARRDGLPD---LRSETWKYTSLRTLERRHFSQAPTAATTIDPAWLNT-----I 71
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P + G + ++ + + A+ D
Sbjct: 72 PTPRLVFVNGRHSPSLSNLSGLPQGMTLHPL---------------SALPREQDKGLHRS 116
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERTLIIA 235
D +A LN+A+ +G + + + + + F R I
Sbjct: 117 PPHFKHRDEIFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLRNQIQL 176
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G+ + +E L+ + + A ++++ +QN
Sbjct: 177 HRGASLQLIEHQLHTGH-AAHLNNVLTRIHLAPGACLEHARLQNDA--------TATTSF 227
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ ++ +E G+ ++ + L G+ + I + + + +D+ +
Sbjct: 228 LRTDAVLAQDAEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHI 287
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+A+NT S ++ +GI S + G + +H+GA S +LL+ N T P
Sbjct: 288 EHIARNTASELLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPV 347
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H AT ++ + LFY RGIP A L+ F E
Sbjct: 348 LIINTDEVQAAHGATVGQLDPQALFYLRTRGIPHTTAQQLLSAAFCHE 395
>gi|254469354|ref|ZP_05082759.1| FeS assembly protein SufD [Pseudovibrio sp. JE062]
gi|211961189|gb|EEA96384.1| FeS assembly protein SufD [Pseudovibrio sp. JE062]
Length = 428
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 65/405 (16%), Positives = 118/405 (29%), Gaps = 42/405 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+ + P R + DL ++ +
Sbjct: 35 RKQAWDAFKAKGIP---HRRVEEWHYTDLRT------------------KMTDAFALASK 73
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ + L G + V +G+ + E + L
Sbjct: 74 TSPKADALKGAGGGLETYRIAIVNGRYVPELSSNQALAGLT-------VTEADGFLAAQL 126
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
T D+ A LN A+ G + I + + + T +
Sbjct: 127 GT-----DDAMAHLNQALVQGGITIKIDADATIETPIEIVRYTDGTEVSSYAGTSVEIGS 181
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ +E + A+ E+ D A I + +Q +
Sbjct: 182 GAKALIIESFEGDA-EAAYQSNALTEVKVGDKANIHWLKLQVESEKAQH--------IET 232
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G + GSA++ +GE + + Q D + H
Sbjct: 233 LSIELGAETNFQHFIYNEGSALSRAQLFLEFKGEGTHAGLRGTCLLKDSQHADITLFVNH 292
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + + + ++GK+ V GA + SLL+ + + P +E
Sbjct: 293 AVPECESREYYRAVVDDKARAVFQGKIIVEPGAQKTDGQMMIKSLLLSDTAEINAKPELE 352
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
H +TT I ++ LFY + RGIPE A ++V F+
Sbjct: 353 IFADDVQCAHGSTTGDIDEDLLFYLMARGIPEAQARKILVLAFLS 397
>gi|319784071|ref|YP_004143547.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169959|gb|ADV13497.1| FeS assembly protein SufD [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 422
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 90/433 (20%), Positives = 158/433 (36%), Gaps = 50/433 (11%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
ML+ R A P+ R + + DL D + +
Sbjct: 34 MLK-RDDAIETI-KHGLPT---RRVESWHYTDLRRLL-------NTVPDFDPAAMAKAIA 81
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ IL G +KV V + T + +G+ +AI
Sbjct: 82 PIVDGSTVVSILNGKSDAKVPVLEGVSFQRLSETLVDGSAAAGLDPYGSDDAI------- 134
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
ALN+A DG FV I GV + T R +
Sbjct: 135 ---------------GALNTAFVADGYFVDIADGVELEKPVELQNLQAGGQT--HVRLPV 177
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ +E T ++V +LV + AE+ + VQ
Sbjct: 178 RVGAGAKAVIVERQTGDGAALG---SSVSQLVLGEGAEVTWLIVQEQPETA--------T 226
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + G +K++ + G + + GE + + I + G D
Sbjct: 227 HLAQFKAHIGKNAKLTLFVMNAGGRLVRQEIMVRTTGEGADFKLRGINLLAGDTHTDVTM 286
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H +TTS + + + G + ++G+++VH+ A + C++LL+ ++ T
Sbjct: 287 VLDHAVPHTTSTEIIRNVVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTK 346
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H AT ++I +HLFY + RG+ E++A L+V FV EV+++L E
Sbjct: 347 PELEIFADDVICGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDEAI 406
Query: 474 VEAQKLIDISLEG 486
VEA ++ L+G
Sbjct: 407 VEA---LEARLDG 416
>gi|29832868|ref|NP_827502.1| iron-regulated ABC-type transporter [Streptomyces avermitilis
MA-4680]
gi|29609989|dbj|BAC74037.1| putative FeS assembly protein SufD [Streptomyces avermitilis
MA-4680]
Length = 393
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 67/383 (17%), Positives = 130/383 (33%), Gaps = 28/383 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+++ P+ T + + D +V T V E
Sbjct: 34 SFDVADFPVPHGREEEWRFTPLERLRGLHDGTAVATG-----DGVKVDVSAPEGVTVETV 88
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ D A SA G +PK + ++ +G +
Sbjct: 89 GRDDARIGRAGTPVDRVAAQAYSAFEKAGVVT-VPKETVLTEPIRI--AVHGEGGVAYGH 145
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+I + + + + AA V+ + D A++ +VQ+W
Sbjct: 146 QVIELGAFAEAVVV-----IDHTGDAVLAANVDYILGDGAKLTVVSVQDWDDKAVH---- 196
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
V + G + + G + +P G E + + ++ Q +
Sbjct: 197 ----VGQHNALIGRDATFKSFVVTFGGDLVRLHPRVAYAGTGGEAELFGLYFTDAGQHQE 252
Query: 351 SGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H + S + KG ++ + G V + A + + +L++ +
Sbjct: 253 HRLLVDHNTPHCKSNVAYKGALQGDGAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGAR 312
Query: 410 AHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++P +E + H + T + DE LFY + RGIP + A L+V GF E++Q++
Sbjct: 313 VDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPADEARRLVVRGFFAELVQQI 372
Query: 469 PMEFAVEAQKL---IDISLEGSV 488
+ E +L ID LE SV
Sbjct: 373 GVADIQE--RLLVRIDEELEASV 393
>gi|28198599|ref|NP_778913.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182681282|ref|YP_001829442.1| FeS assembly protein SufD [Xylella fastidiosa M23]
gi|28056683|gb|AAO28562.1| ABC transporter membrane protein [Xylella fastidiosa Temecula1]
gi|182631392|gb|ACB92168.1| FeS assembly protein SufD [Xylella fastidiosa M23]
gi|307579733|gb|ADN63702.1| FeS assembly protein SufD [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 422
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 68/408 (16%), Positives = 129/408 (31%), Gaps = 34/408 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A P +R + L P + +DP L T I
Sbjct: 20 RRQALEDARRDGLPD---LRSETWKYTSLRTLERRHFTQAPTAATAIDPTWLNT-----I 71
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P + G ++ + + A D
Sbjct: 72 PTPRLVFVNGRHNPNLSNLSGLPQGMTLHPL---------------SAPPREQDKGLHRS 116
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL--IIA 235
D +A LN+A+ +G + + + + + F L I
Sbjct: 117 PPHFKHRDETFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLLNQIEL 176
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G+ + +E L+ + + A ++++ +QN
Sbjct: 177 HRGASLQLIEHQLHTGH-AAHLNNVLTRIHIAPGACLEHARLQNDA--------TATTSF 227
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ ++ +E G+ ++ + L G+ + I + + + +D+ +
Sbjct: 228 LRTDAVLAQDAEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHI 287
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+A+NT S ++ +GI S + G + +H+GA S +LL+ N T P
Sbjct: 288 EHIARNTASELLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPV 347
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H AT ++ + LFY RGIP A L+ F E
Sbjct: 348 LIINADEVQAAHGATVGQLDPQALFYLRTRGIPHTTAQQLLSAAFCHE 395
>gi|152970687|ref|YP_001335796.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262044176|ref|ZP_06017248.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012604|ref|ZP_08307439.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
gi|150955536|gb|ABR77566.1| required for stability of iron-sulfur component of FhuF [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259038473|gb|EEW39672.1| FeS assembly protein SufD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328533763|gb|EGF60452.1| FeS assembly protein SufD [Klebsiella sp. MS 92-3]
Length = 424
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 73/419 (17%), Positives = 141/419 (33%), Gaps = 47/419 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ + D L + G D+ + L +P+
Sbjct: 33 LQQLLRLGLPTRKHEDWKYTPLDAL--------LNGRFVADEGASLSAEQRDALALPLD- 83
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
V +D + ++L SGV ++ +++L +
Sbjct: 84 -------AWRLVFIDGRY-----HPQLSDDLAASGVEVSVDNQ---------RQHLPDAL 122
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
+ L ++ + + +P+ R L + T + L +
Sbjct: 123 QPE--VFLHLTESLAQTVTRIRVPRNRRLDKPLLLMHITSGLAGDALNTAHYRHHL-ALE 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ + +E ++ + + DNA +++ + + Y+F
Sbjct: 180 SGAEATIVEHYL-SLNEQPHFTGGRLTMTVADNAHLQHIKL-------AFENARSYHFAH 231
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G + S L GE S S+A+ + DS T +
Sbjct: 232 NDLLLGRDASAFSS-SFLLGGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCDSRTWLD 290
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H TSR + K I + + G ++V A + ++LL+G T P +
Sbjct: 291 HQVGYCTSRQLHKTIVSDKGRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQL 350
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
E H AT +I +E LFY RGI ++AA +I+ F E+ + + + E
Sbjct: 351 EIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALRE 409
>gi|73748621|ref|YP_307860.1| iron-regulated ABC transporter, subunit SufB-related
[Dehalococcoides sp. CBDB1]
gi|289432646|ref|YP_003462519.1| SufBD protein [Dehalococcoides sp. GT]
gi|73660337|emb|CAI82944.1| iron-regulated ABC transporter, subunit SufB-related
[Dehalococcoides sp. CBDB1]
gi|288946366|gb|ADC74063.1| SufBD protein [Dehalococcoides sp. GT]
Length = 411
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 87/402 (21%), Positives = 166/402 (41%), Gaps = 25/402 (6%)
Query: 84 DDL---YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
DD+ Y ++ ++ E + G+ + + + +G D
Sbjct: 26 DDILLERYTDNTEAHKYVNKPSELASEDKARILESGVILDDLKERSGT-------YIQMD 78
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
+ V + +++ G+ M SEA ++ D +K Y V V + Y A DG
Sbjct: 79 NHPVHFSAQQD----GIEIMSTSEAAKKY-DWLKDYWWKAVSVDADKYTAHVELNQADGY 133
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
F+ GV+ + + + + + Q +IIA+EGS + + GCT+ R E LH
Sbjct: 134 FIRALPGVKTEFPVQSCMYMAKNQSIQNVHNIIIAEEGSELHIITGCTSAHRTETGLHLG 193
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
V E A++ ++ + W P + +S +
Sbjct: 194 VTEFYIKKGAKVTFTMIHTWSPDIAVRPRTG-------AIVEENGVFLSNYVIMKTVKNL 246
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
YP L GE + F S+ + ++D G+++ AK+T + ++++ ++ G +
Sbjct: 247 QSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNAKHTRTELITRALTTGGEIIS- 305
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG + + +C L++G+ + IP + + S +L HEA KI++E +
Sbjct: 306 RG--YIEGKVPDCKGHLECRGLILGDKGIIYAIPELMGRVSGVDLSHEAAVGKIAEEEVE 363
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
Y + RG+ ++ A A IV GF+ ++ LP E K I +
Sbjct: 364 YLMARGLNKDEATAAIVRGFLNVDIEGLPPLLKEEMDKAIKL 405
>gi|190891949|ref|YP_001978491.1| ABC transporter involved in Fe-S cluster assembly, permease
[Rhizobium etli CIAT 652]
gi|190697228|gb|ACE91313.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 652]
Length = 424
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 77/432 (17%), Positives = 141/432 (32%), Gaps = 45/432 (10%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
R P+ R A + D
Sbjct: 34 TALRDRLLDDLKKAGLPT---RRIEAWHYTDFKNLLR----------------------- 67
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
G+P + + AG + V + ++ G+ SE++ +
Sbjct: 68 -GLPSQAGD--AGSDPLEPLVAGSMVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGG 124
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
GD+ +N + DG V +P L F T R +
Sbjct: 125 LDALG----GDDAVGRINGSFVRDGYVVDVPDNTDLEDPLEIQFIHAGGQT--HTRLPVS 178
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
G + +E A D + + + ++ E+ + +Q D+
Sbjct: 179 FGAGVQATVIERHRAVTGDAAFV-SHISDITVGKGTELTWIILQQQGADDTHLG------ 231
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G +K+ + G + + + GE + I + D
Sbjct: 232 --QIRVDLGADAKLRMFVINAGGKLVRQELHINVTGEGADLTLRGINLLGADSHTDVTMV 289
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H +T S V + + + ++G + V A + C++LL+ ++ P
Sbjct: 290 LGHDVPHTGSTEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKP 349
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT + I HL+Y + RGIPE A A++VN FV E++++L E V
Sbjct: 350 ELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALV 409
Query: 475 EAQK-LIDISLE 485
EA + +I LE
Sbjct: 410 EALEGVISAWLE 421
>gi|300904532|ref|ZP_07122371.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|301303196|ref|ZP_07209322.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|300403526|gb|EFJ87064.1| FeS assembly protein SufD [Escherichia coli MS 84-1]
gi|300841605|gb|EFK69365.1| FeS assembly protein SufD [Escherichia coli MS 124-1]
gi|315257516|gb|EFU37484.1| FeS assembly protein SufD [Escherichia coli MS 85-1]
Length = 423
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGPRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|58038583|ref|YP_190547.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
gi|58000997|gb|AAW59891.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
Length = 392
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 67/377 (17%), Positives = 132/377 (35%), Gaps = 22/377 (5%)
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMP-------- 161
G+P R E +A A +V + T L V+
Sbjct: 21 AALADTGLPTRRVEAWRYTPLRSIADTAWQKAVPLSTETATALLDRLVLPETGARMVYGN 80
Query: 162 --ISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
+ + P+ V++ V P+ F A LN+A+ G + +P G + L+
Sbjct: 81 GQLLSTLSALPETVRQASENVSPLKGVFSATLNTALGERGLDIRVPAGTDAGL-LTLVSL 139
Query: 220 INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
+ + + I+ ++G+ ++ + + ++V A +++ VQ
Sbjct: 140 SDGQDVSTHLQHRIVLEDGASLTL---YDVSAGEGRYIANPRFDIVVGKGATLRHVKVQR 196
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
+ + + L GS++ L +
Sbjct: 197 ESLTA--------THLAIVSADVAEKGEYDSFTLNQGSSLARHEAVVTLGAPHAMAHVNG 248
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+ I +G + D + + H A + +SR K + + ++GK+ V R A + +
Sbjct: 249 VQIVDGQRLNDLTSMIHHAAPDGSSRQTVKTVLSEAGQGVFQGKILVDRVAQKTDGYQMN 308
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+LL+ ++ P +E H AT + DE LFY RGI E A ++V
Sbjct: 309 QALLLSEKAQINSKPELEIYADDVKCSHGATVGALDDEQLFYLRSRGIAEADARDMLVRA 368
Query: 460 FVREVLQKLPMEFAVEA 476
F+ + L + E +
Sbjct: 369 FLIDALDLVSDEGLRDL 385
>gi|215486856|ref|YP_002329287.1| cysteine desulfurase activator complex subunit SufD [Escherichia
coli O127:H6 str. E2348/69]
gi|215264928|emb|CAS09314.1| component of SufBCD complex [Escherichia coli O127:H6 str.
E2348/69]
Length = 423
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 98/287 (34%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I +E +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDNEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|312966834|ref|ZP_07781052.1| feS assembly protein SufD [Escherichia coli 2362-75]
gi|312288298|gb|EFR16200.1| feS assembly protein SufD [Escherichia coli 2362-75]
Length = 423
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTVRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G +V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLTNVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I +E +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDNEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 404
>gi|283850670|ref|ZP_06367957.1| SufBD protein [Desulfovibrio sp. FW1012B]
gi|283573913|gb|EFC21886.1| SufBD protein [Desulfovibrio sp. FW1012B]
Length = 385
Score = 203 bits (516), Expect = 7e-50, Method: Composition-based stats.
Identities = 80/375 (21%), Positives = 150/375 (40%), Gaps = 13/375 (3%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +L + + +++GV + + V + L+K GV + I EA+ +
Sbjct: 19 IADLRQLDPADKAEMLMSGVDVEERERAGTYLQVDHGRVHCKSLQK-GVEILDIKEALAK 77
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+ D + Y T V + + + G FV KG + + + + GQ
Sbjct: 78 Y-DGLPGYFWTQVDPDKDEFTRSAAENLHGGYFVRTEKGAKITEPVQSCLFLKGDMVGQN 136
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
++I ++ S + + GC+ + H + E NA++ ++ + NW
Sbjct: 137 VHNVVIVEDDSELHIITGCSVAHGSKGAAHLGISEFFVGKNAKLTFTMIHNWAESTVVRP 196
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
G I+ L YP+ L G+ + F S+ ++
Sbjct: 197 RTG-------GVVDEGGVFINNYVLLKPVKDLQSYPAIRLNGKGAVARFNSVIVAPKGSY 249
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+DSG+++ A +T I+S+ I++G + RG + + ++ +C L++G
Sbjct: 250 VDSGSRIELNAPDTKGEIISRTIASGGTIVA-RG--FIGGNSVPAKGHLECKGLILG-GG 305
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H IP + L HEA KI+ E + Y + RG+ E A + IV GF+ + L
Sbjct: 306 VIHAIPELLGSVDGVELSHEAAVGKIAQEEIEYLMARGLDENEATSTIVRGFLNVDIMGL 365
Query: 469 PMEFAVEAQKLIDIS 483
P E +K I S
Sbjct: 366 PQELKDVIEKTISES 380
>gi|122089391|emb|CAL12239.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 388
Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 15/284 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + +P G L + K T + L I + + +
Sbjct: 93 HLTESLAQQRLHIRLPAGKHSDKPLYLLHISSGKGSEVVNTSHYRHHLAI-EASAQAEVI 151
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E ++ A + + +NAE+ + + P
Sbjct: 152 EHF-VSLNEQPHFTGARLTISVGENAELSHCKLAFETPQSYHFAHN--------DLVLSR 202
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 203 DARAKSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTRTYLEHNKGYCES 262
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K + + G + V + A + ++LL+ T P +E
Sbjct: 263 RQLHKTMVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 322
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I E LFY RGI + A +I+ F E+ + +
Sbjct: 323 CSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAI 366
>gi|168239253|ref|ZP_02664311.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737662|ref|YP_002114387.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|194713164|gb|ACF92385.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197288008|gb|EDY27395.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 423
Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTKPLLLMHITQGVDSDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|302546307|ref|ZP_07298649.1| FeS assembly protein SufD [Streptomyces hygroscopicus ATCC 53653]
gi|302463925|gb|EFL27018.1| FeS assembly protein SufD [Streptomyces himastatinicus ATCC 53653]
Length = 389
Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 60/306 (19%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V +PK + ++ +G F +I + +
Sbjct: 99 DRVAAQAYSSFEKASVVSVPKEKVLSEPVRI--AVHGEGGTAFGHQVIEVGAFAEAVVV- 155
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ AA VE + D A++ +VQ+W + G
Sbjct: 156 ----IDHTGDATLAANVEYLIGDGAKLTVVSVQDWDDTAVHAG--------QHTALVGRD 203
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P + E Y + ++ Q + + H + S
Sbjct: 204 ATFKSVVVTFGGDLVRLHPRVVYGAPGGEAELYGVYFTDNGQHQEHRLFIDHDTPHCRSN 263
Query: 366 IVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+ KG G + + G V + A + + +L++ + ++P +E +
Sbjct: 264 VAYKGALQGKDAHAVWIGDVLIRAAAEGTDTYELNRNLVLTDGARVDSVPNLEIETGEIV 323
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDI 482
H + T + DE LFY + RGIP + A L+V GF E++Q++ + E I+
Sbjct: 324 GAGHASATGRFEDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGLPELEERLIAKIEA 383
Query: 483 SLEGSV 488
LE SV
Sbjct: 384 ELEASV 389
>gi|149365689|ref|ZP_01887724.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
gi|115348102|emb|CAL21029.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|149292102|gb|EDM42176.1| hypothetical protein YPE_0859 [Yersinia pestis CA88-4125]
Length = 407
Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 99/289 (34%), Gaps = 13/289 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTLIIADEGSYVSYLE 245
L ++ + + +P G L + + R ++ + + +E
Sbjct: 112 HLTESLAQERLHIRLPVGQHSDKSLYLLHISSGNDSDMVNTSHSRHHLVVEANAQAEVIE 171
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
++ A + + DNAE+ + + P G
Sbjct: 172 HF-VSLNEQPHFTGARLTIAVGDNAELNHYKLAFETPKSYHFAHN--------DLVLGRD 222
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
++ G+ +T S L GE S S+ + G + D+ T + H + SR
Sbjct: 223 ARARSHSFLLGAGLTRHNTSSQLNGEGSSLSMNSLLLPVGREICDTRTYLEHNKGHCESR 282
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K + + G + V + A + ++LL+ + T P +E
Sbjct: 283 QLHKVMVRERGKAIFNGMIKVAKHALKTDGQMTNNNLLLSHLAEVDTKPQLEIYADDVKC 342
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
H AT +I E LFY RGI + A +I+ F EV + + E
Sbjct: 343 SHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAEVTEAIHNEAIR 391
>gi|291443816|ref|ZP_06583206.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
gi|291346763|gb|EFE73667.1| iron-regulated ABC-type transporter [Streptomyces roseosporus NRRL
15998]
Length = 393
Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 60/306 (19%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V + K + ++ +G F LI + +
Sbjct: 103 DRVAAQAYSSFEQASVVTVAKEAVLTEPIRI--AVHGEGGVAFGHQLIELGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ V D A++ +VQ+W V + G
Sbjct: 160 ----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDDTAVH--------VGQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P E + + ++ Q + + H + S
Sbjct: 208 ASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHRLLVDHNTPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 AVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY RGIP E A L+V GF E++Q++ + E + I+
Sbjct: 328 GAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGLPDVEERLIEKIEA 387
Query: 483 SLEGSV 488
L+ SV
Sbjct: 388 ELKASV 393
>gi|239940385|ref|ZP_04692322.1| hypothetical protein SrosN15_05256 [Streptomyces roseosporus NRRL
15998]
gi|239986864|ref|ZP_04707528.1| hypothetical protein SrosN1_06120 [Streptomyces roseosporus NRRL
11379]
Length = 385
Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 60/306 (19%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V + K + ++ +G F LI + +
Sbjct: 95 DRVAAQAYSSFEQASVVTVAKEAVLTEPIRI--AVHGEGGVAFGHQLIELGAFAEAVVV- 151
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ V D A++ +VQ+W V + G
Sbjct: 152 ----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDDTAVH--------VGQHNALVGRD 199
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P E + + ++ Q + + H + S
Sbjct: 200 ASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHRLLVDHNTPHCKSN 259
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 260 AVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 319
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY RGIP E A L+V GF E++Q++ + E + I+
Sbjct: 320 GAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGLPDVEERLIEKIEA 379
Query: 483 SLEGSV 488
L+ SV
Sbjct: 380 ELKASV 385
>gi|285005770|ref|YP_001006409.2| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 443
Score = 202 bits (515), Expect = 8e-50, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 15/284 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + +P G L + K T + L I + + +
Sbjct: 148 HLTESLAQQRLHIRLPAGKHSDKPLYLLHISSGKGSEVVNTSHYRHHLAI-EASAQAEVI 206
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E ++ A + + +NAE+ + + P
Sbjct: 207 EHF-VSLNEQPHFTGARLTISVGENAELSHCKLAFETPQSYHFAHN--------DLVLSR 257
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 258 DARAKSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTRTYLEHNKGYCES 317
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K + + G + V + A + ++LL+ T P +E
Sbjct: 318 RQLHKTMVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 377
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I E LFY RGI + A +I+ F E+ + +
Sbjct: 378 CSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAI 421
>gi|289671185|ref|ZP_06492260.1| FeS assembly protein SufD [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 420
Score = 202 bits (515), Expect = 8e-50, Method: Composition-based stats.
Identities = 76/416 (18%), Positives = 144/416 (34%), Gaps = 34/416 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DARRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPALVDAAALD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP + G + ++ + G+ S ++ D ++
Sbjct: 68 DIPSPRLVFVNGRPSEALSDLSPL--------------PDGMQLDTFSASLAAGDDA-QQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
D +A LN+A+ +G V + G + + L F R LI
Sbjct: 113 LRGRRFDGSDEIFARLNAALADEGVLVRVRDGAQIELPLHLVFVSVTGEHDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + +A + ++ +Q +
Sbjct: 173 EVRAGAALQVVEHHL-HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHATS------- 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG +Q+D+
Sbjct: 225 -LLRTDAVLARNARYQRVDLELGAGLSRHELNVRLEGSNAQLTANGVLLGNGRRQVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEEAQRLLSAAFCHEPLRVLP 399
>gi|116747613|ref|YP_844300.1| SufBD protein [Syntrophobacter fumaroxidans MPOB]
gi|116696677|gb|ABK15865.1| SufBD protein [Syntrophobacter fumaroxidans MPOB]
Length = 408
Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats.
Identities = 84/405 (20%), Positives = 158/405 (39%), Gaps = 24/405 (5%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
P +D + + + L +V E G+ + E E +A
Sbjct: 23 PDVDLGEFRRTPVEHHYLSDRDLRNVPAEDRERLIMSGVDVDENERIA-------TYFQK 75
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
SV + +++ + +PI +A+ E D ++ Y +V V + Y A D
Sbjct: 76 DTSVVHCKSRQKD-----IQVIPIRQALKEC-DWIRDYYWKLVSVDADKYTASAEMELHD 129
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G + G + + ++++G Q ++IA+E S + + GC+ LH
Sbjct: 130 GYVIRSLPGAKSEYPVQACLYLDKEGIQQNVHNIVIAEEDSELHIITGCSTSPHLTKGLH 189
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
V E NA++ ++ + NW + ++
Sbjct: 190 VGVSEFYVKKNAKLSFTMIHNWAEDLVVRPRSV-------SRIEEGGLFLNNYICMKPVR 242
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP+ L GE + +YSI + + + D G +++ T + IV++ IS G
Sbjct: 243 SLQMYPTTFLTGEGAVARYYSIIVGSPNSEYDVGGRIVLQKPGTRAEIVARSISNGGRII 302
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+ RG + R +C L++ + +P +E + HEA KI+ E
Sbjct: 303 S-RG--HLIGEVPDIRAHLECKGLIL-KGGMIYAVPELEGHVDGVEMSHEAAVGKIAQEE 358
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
+ Y + RG+ EE A + IV GF+ + +LP + E + I++S
Sbjct: 359 INYLMSRGLDEEEATSTIVRGFLNVDIPELPSQLRAEIDRAIEMS 403
>gi|239906978|ref|YP_002953719.1| SufBD family protein [Desulfovibrio magneticus RS-1]
gi|239796844|dbj|BAH75833.1| SufBD family protein [Desulfovibrio magneticus RS-1]
Length = 396
Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats.
Identities = 78/379 (20%), Positives = 153/379 (40%), Gaps = 17/379 (4%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ L + + +++G+ + + V + L+K GV + I +A+ +
Sbjct: 30 IADLRTLDAADKAEMLMSGIDVEERERAGSYLQVDHGRVHCKSLQK-GVEVLDIKDALAK 88
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+ D + +Y T V + + + G FV KG + + + + GQ
Sbjct: 89 Y-DGLPQYYWTQVDKDKDEFTRSAAENLHGGYFVRTEKGAKVAEPVQSCLFLKGDMIGQN 147
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+II ++ S + + GC+ + H + E+ NA++ ++ + NW
Sbjct: 148 VHNVIIVEDDSELHIITGCSVAHGSKGAAHLGITEIFVGKNAKLTFTMIHNWAESTVVRP 207
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
I+ L YP L G+ + F S+ ++
Sbjct: 208 RTGGT-------VEEGGVFINNYVLLKPVKDLQSYPVIRLNGQGAVARFNSVIVAPKGSH 260
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D+G+++ A +T I+S+ I++G + RG + + ++ +C L++G
Sbjct: 261 VDTGSRIELNAPDTKGEIISRTIASGGTI-IARG--FIGGNSVPAKGHLECKGLILG-GG 316
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H IP + L HEA KI+ E + Y + RG+ EE A + IV GF+ + L
Sbjct: 317 VIHAIPELLGSVDGVELSHEAAVGKIAQEEIEYLMARGLDEEEATSTIVRGFLNVDIMGL 376
Query: 469 PMEFAVEAQKLIDISLEGS 487
P E Q +I+ ++ S
Sbjct: 377 P----KELQDVIEATISES 391
>gi|50954831|ref|YP_062119.1| ABC transporter, membrane component [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951313|gb|AAT89014.1| ABC transporter, membrane component [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 394
Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats.
Identities = 67/318 (21%), Positives = 115/318 (36%), Gaps = 20/318 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++ D A + + T R G + T++
Sbjct: 90 DAHIGAAGTPEDRASANAWTGFERALLVSIAGDDAKE----VTLTRSALGGAARAAHTVV 145
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + + + P + VE + +A++ TVQ W
Sbjct: 146 EVAGGARATLILQNSGPAHL-----SENVEFLVGKDADLTVVTVQEWDDDALH------- 193
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V ++I + G + PS L G +S E ++ Q ++
Sbjct: 194 -VAAHFAELAEGARIKHVAVTLGGGVVRLNPSAHLAGARSDAELLGAYFADADQHLEQQV 252
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H T SR+ KG G + + G V + A + + Q +L++ + A +
Sbjct: 253 YVYHDGPETRSRVTYKGALQGVGARTVWIGDVLIGPKATGTDTYEQNRNLVLTDGARADS 312
Query: 413 IPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
IP +E + H + T + DE LFY RGIPEE A L+V GF+ E++Q++
Sbjct: 313 IPNLEIETGDIVGAGHASATGRFDDEQLFYLQSRGIPEEEARRLVVRGFLFEIVQQIGSP 372
Query: 472 FAVE-AQKLIDISLEGSV 488
E Q I+ L SV
Sbjct: 373 ALQERLQTAIEAELALSV 390
>gi|294628714|ref|ZP_06707274.1| FeS assembly protein SufD [Streptomyces sp. e14]
gi|292832047|gb|EFF90396.1| FeS assembly protein SufD [Streptomyces sp. e14]
Length = 385
Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/306 (19%), Positives = 118/306 (38%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V +PK + ++ +G + +I + + +
Sbjct: 94 DRVAAQAYSAFEHASVVTVPKETVLTEPIRI--AVHGEGGTAYGHQVIELEAFAEAVVV- 150
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ + D A++ +VQ+W V + G
Sbjct: 151 ----IDHTGDAVLAANVDYLIGDGAKLTVVSVQDWDDRAVH--------VGQHNALIGRD 198
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + +P G E + + ++ Q + + H + S
Sbjct: 199 AALKSVVVTFGGDLVRLHPRVTYAGTGGEAEMFGLYFTDAGQHQEHRLFVDHNTPHCKSN 258
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 259 VVYKGALQGDDAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGSRVDSVPNLEIETGEIV 318
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY + RGIPE A L+V GF E++Q++ + E I+
Sbjct: 319 GAGHASATGRFDDEQLFYLMARGIPEYEARRLVVRGFFAELVQQIGVSDIEERLLARIEE 378
Query: 483 SLEGSV 488
LE SV
Sbjct: 379 ELEASV 384
>gi|220905185|ref|YP_002480497.1| SufBD protein [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219869484|gb|ACL49819.1| SufBD protein [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 387
Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats.
Identities = 83/380 (21%), Positives = 147/380 (38%), Gaps = 14/380 (3%)
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
+ L +E+ + AG+ + AV F G+ M I EA
Sbjct: 17 AAPIENLASLPAADKERLVHAGIDVNDHAVSGAFMQ-LNHAGVHCHASHEGLDLMDIREA 75
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ + D + +Y ++ + + L G FV KG + + + I G
Sbjct: 76 LKKF-DGLPQYYWKLLDPEKDEFTRLTREHCNGGYFVRARKGAKITQPVQSCMFIKGHGA 134
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
GQ +++ +EG+ + L GC + H + E ++ ++ + NW
Sbjct: 135 GQSIHNIVVVEEGAELHILGGCATAHDANDTAHLGITEYYVEKGGKLTFTMIHNWGT--- 191
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
G + L A YP+ L+G + F S+ ++
Sbjct: 192 ----STTVRPRSAGIVEAGGEFQNNYILLKPVADLQMYPTMKLQGSGAVARFNSVIVTPE 247
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
+D G ++ A +T IVS+ ++ G + RG + AA +R +C L++G
Sbjct: 248 GSHVDCGNRIELNAPDTRGEIVSRTLTTGGTIIN-RG--FIGASAAPARGHLECKGLILG 304
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
H IP ++S L HEA KI+ E + Y + RG+ E+ A + IV GF+ +
Sbjct: 305 -GGRIHAIPELDSNQDGVELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLNVDI 363
Query: 466 QKLPMEFAVEAQKLIDISLE 485
LP + + I + LE
Sbjct: 364 MGLPDQLQKAMDEQIAL-LE 382
>gi|238895188|ref|YP_002919923.1| cysteine desulfurase activator complex subunit SufD [Klebsiella
pneumoniae NTUH-K2044]
gi|238547505|dbj|BAH63856.1| Fe-S cluster assembly protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 424
Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 139/412 (33%), Gaps = 47/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + LD + E + +
Sbjct: 33 LQQLLRLGLPT---RKHEDWKYT---------------PLDALLNGRFVADEGASLSAEQ 74
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
++ LA + V F ++L SGV ++ +++L +
Sbjct: 75 RDALALPLDAWRLV---FIDGCYHPQLSDDLAASGVEVSVDNQ---------RQHLPDAL 122
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
+ L ++ + + +P+ R L + T + L +
Sbjct: 123 QPE--VFLHLTESLAQTVTRIRVPRNRRLDKPLLLMHITSGLTGDALNTAHYRHHL-ALE 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ + +E ++ + + DNA +++ + + Y+F
Sbjct: 180 SGAEATIVEHYL-SLNEQPHFTGGRLTMTVADNAHLQHIKL-------AFENARSYHFAH 231
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G + S L GE S S+A+ + DS T +
Sbjct: 232 NDLLLGRDASAFSS-SFLLGGQVLRHQTSTRLGGENSNLRLNSLAMPVKNEVCDSRTWLD 290
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H TSR + K I + + G ++V A + ++LL+G T P +
Sbjct: 291 HQVGYCTSRQLHKTIVSDKGRAVFNGLINVAPLALKTDGQMTNNNLLLGRLAEVDTKPQL 350
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I +E LFY RGI ++AA +I+ F E+ + +
Sbjct: 351 EIYADDVKCSHGATVGRIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAI 402
>gi|49475625|ref|YP_033666.1| hypothetical protein BH08620 [Bartonella henselae str. Houston-1]
gi|49238432|emb|CAF27660.1| hypothetical protein BH08620 [Bartonella henselae str. Houston-1]
Length = 422
Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats.
Identities = 79/415 (19%), Positives = 156/415 (37%), Gaps = 46/415 (11%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + T + PS + + + +L S P++ + +G
Sbjct: 36 IRKRAIELFKTTRLPS---RKIESWHYTNLRTLLKSVSHFSPENNGQL----------VG 82
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ E ++ + + + S + EEL+K
Sbjct: 83 GLLSESQVFSIENGKTLTHPEI--SDVTIKRLAEELEKESAKIDF--------------- 125
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
V ++F LN A TDG +IP+ + + + + F I D
Sbjct: 126 ----VTSDEDFIGQLNIAFVTDGWLFHIPENTKLNVPIELQNIQMGGQSHTFSD--IKMD 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ S ++E D+ +++ L E+ + ++N F
Sbjct: 180 KNSQAVFVEH--QTGDDKETFISSIFSLNVAAYGEVTWILIRN-------RGFNSTQFGK 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
R G +K+S + GS + + L+GE+S + I + +G D +
Sbjct: 231 FR-AVLGQGAKLSLYVINIGSQLNRQEIDVELQGEESDFQLRVINLLSGQTHSDLTMTVR 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ + +TS + + + + ++G + V + A + C+SL++ ++ + P +
Sbjct: 290 HIEEKSTSTEIVRNVVTDKAVGVFQGIIRVAQKAQKTDARMACNSLILSDDAEFNAKPEL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
E H AT + I+ +HLFY + RGIP + A AL++ GFV E++ + E
Sbjct: 350 EIFADDVVCGHGATVANINCDHLFYLMARGIPFKTARALLIKGFVSELIDDIKQE 404
>gi|222445299|ref|ZP_03607814.1| hypothetical protein METSMIALI_00927 [Methanobrevibacter smithii
DSM 2375]
gi|261350140|ref|ZP_05975557.1| SufB/sufD domain protein [Methanobrevibacter smithii DSM 2374]
gi|222434864|gb|EEE42029.1| hypothetical protein METSMIALI_00927 [Methanobrevibacter smithii
DSM 2375]
gi|288860926|gb|EFC93224.1| SufB/sufD domain protein [Methanobrevibacter smithii DSM 2374]
Length = 411
Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats.
Identities = 88/367 (23%), Positives = 149/367 (40%), Gaps = 17/367 (4%)
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
GV T + F V F + V M I A+ ++ VK Y+ VV
Sbjct: 55 VGVDTEEKGRSGSFLQVDQSNIFTNNSMSNSVEVMNIGVALDKYH-WVKDYMWNVVKPDA 113
Query: 186 NFYAALNSAV------FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+ Y +A+ G FV G + + I+++ Q +IIA+E S
Sbjct: 114 DKYT-AKTALREEKDGIKSGYFVRSLPGTKEVFPVQACMFISDEDIMQTAHNVIIAEENS 172
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ + GC + + +H V EL A+I ++ V NW
Sbjct: 173 ELHLITGCATGEDVSSAMHVGVSELYVKPGAKITFTMVHNWAEQVEVRPRTG-------I 225
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ ++ L + YP+ G S F SI ID G++ A
Sbjct: 226 KVEENGTYLNNYILTSPVNTLQSYPTAYCDGANSRAIFQSIQGGKKDSIIDVGSRAYLNA 285
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ I+S+ +S S RG + + +C L++ ++ + +P +E+
Sbjct: 286 PGSRGEIISRAVSQDESQIFARG--HLAGTVPEVKGHLECHGLVLSDDSMIYAVPELEAS 343
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+++ + HEA KI ++ + Y RGI EE A ++IV GF+ + LP E A E QK+
Sbjct: 344 SANLEMSHEAAVGKIDEDEINYLTSRGITEEEAASMIVRGFLSMDITGLPDELAAETQKM 403
Query: 480 IDISLEG 486
ID+S++G
Sbjct: 404 IDMSVDG 410
>gi|218463424|ref|ZP_03503515.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
Kim 5]
Length = 138
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 104/137 (75%), Positives = 125/137 (91%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF+D++YYAAPKS GP+SLD+VDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVNYPKIDFNDIHYYAAPKSAPGPKSLDEVDPELLKVYEKLGIPLR 120
Query: 121 EQEILAGVQTSKVAVDA 137
EQEILAGV+ K+AVDA
Sbjct: 121 EQEILAGVEKPKIAVDA 137
>gi|283785089|ref|YP_003364954.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
gi|282948543|emb|CBG88133.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 57/331 (17%), Positives = 110/331 (33%), Gaps = 26/331 (7%)
Query: 146 TTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIP 205
T + L++SG + ++ L V + L ++ + + +
Sbjct: 95 ETLSDSLEESGFDVEVNDD---------RRTLPAAVQPE--VFLHLTESLAHSVTHIRVK 143
Query: 206 KGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
+ R L T + L +EG+ + +E + A
Sbjct: 144 RNQRPLKPLLLMHITQGVNDEAVNTAHYRHHL-ELEEGAEATVIEHY-VSLNEARHFTGA 201
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ + NA + + + P + G A+
Sbjct: 202 RLTMNVAANAHLHHIKLAFENPLSHHFAHN--------DITLAADASAYSHSFLLGDAVL 253
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
S L GE + S+A+ + D+ T + H SR + K I + +
Sbjct: 254 RHNTSTRLNGENATLRINSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVF 313
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
G ++V + A + ++LL+G T P +E H AT +I +E +F
Sbjct: 314 NGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDEEQMF 373
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
Y RGI ++ A +I+ F E+ + + E
Sbjct: 374 YLRSRGIRQQDAQQMILYAFAAELTEAISDE 404
>gi|62179962|ref|YP_216379.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|62127595|gb|AAX65298.1| required for stability of iron-sulfur component of FhuF [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|297161457|gb|ADI11169.1| hypothetical protein SBI_08049 [Streptomyces bingchenggensis BCW-1]
Length = 390
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/347 (17%), Positives = 115/347 (33%), Gaps = 19/347 (5%)
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
E V E D L D A S+ S V +
Sbjct: 59 HDGTAEATGGVRVEVSAPEGVTVETVDRTDPRLGKAGKPVDRVAAQAYSSF-EKASVVSV 117
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
K + + +G + ++ + + + AA VE
Sbjct: 118 AKETVLTEPVRISV--HGEGGTAYGHQVVEVGAFAEAVVV-----IDHTGDATLAANVEY 170
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ D A++ ++Q+W + G + + G + +P
Sbjct: 171 LIGDGAKLTVVSIQDWDDTAVHAA--------QHTALVGRDATFKSVVVTFGGDLVRLHP 222
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGK 383
+ E Y + ++ Q + + H + S + KG G + + G
Sbjct: 223 RVVYGAPGGEAELYGLYFTDNGQHQEHRLFIDHDTPHCRSNVAYKGALQGKDAHAVWIGD 282
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYC 442
V + A + + +L++ + ++P +E + H + T + DE LFY
Sbjct: 283 VLIRAAAEGTDTYELNRNLVLTDGARVDSVPNLEIETGEIVGAGHASATGRFEDEQLFYL 342
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSV 488
+ RGIP + A L+V GF E++Q++ + E I+ LE SV
Sbjct: 343 MARGIPADEARRLVVRGFFAELVQQIGIPELEERLIAKIEAELEASV 389
>gi|315299723|gb|EFU58963.1| FeS assembly protein SufD [Escherichia coli MS 16-3]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGGEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + G ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 358 CSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALCDE 404
>gi|318605862|emb|CBY27360.1| iron-sulfur cluster assembly protein SufD [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 437
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 15/284 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + +P G L + K T + L I + + +
Sbjct: 142 HLTESLSQQRLHIRLPAGKHSDKPLYLLHISSGKGSEVVNTSHYRHHLAI-EASAQAEVI 200
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E ++ A + + +NAE+ + + P
Sbjct: 201 EHF-VSLNEQPHFTGARLTISVGENAELSHCKLAFETPQSYHFAHN--------DLVLSR 251
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 252 DARAKSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGSEICDTRTYLEHNKGYCES 311
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K + + G + V + A + ++LL+ T P +E
Sbjct: 312 RQLHKTMVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 371
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I E LFY RGI + A +I+ F E+ + +
Sbjct: 372 CSHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAI 415
>gi|204927622|ref|ZP_03218823.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204322964|gb|EDZ08160.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|285017820|ref|YP_003375531.1| ABC transporter-associated involved in fe-s cluster assembly ABC
transporter [Xanthomonas albilineans GPE PC73]
gi|283473038|emb|CBA15543.1| probable abc transporter-associated involved in fe-s cluster
assembly abc transporter protein [Xanthomonas
albilineans]
Length = 420
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 73/353 (20%), Positives = 138/353 (39%), Gaps = 19/353 (5%)
Query: 142 VSVVTTFKEELKKSGVIFMPIS----EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
V V + L + + ++ A+ + ++L D +A LN+A+
Sbjct: 75 VFVNGRASDALSELSCLPCGVALQRLSALLRGGEDAMRFLGRRFERVDEVFARLNAALAD 134
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
+G + + GVR L F R LI + + +S +E D
Sbjct: 135 EGCVLRVDAGVRVETPLHLVFVSTAAAADLAWHHRHLIELGQNASLSLVEHHL-HLEDAP 193
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
L ++ + A++ ++ VQ P I + + ++ LE
Sbjct: 194 HLSNSLAHIHLAAGAQLMHARVQEDAP-------SITTLL-RTDAVLAREAQYQRVDLEL 245
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
G A+ + L G+ + + + NG +Q+D+ + H+A++T ++ +GI+
Sbjct: 246 GGALVRHELNVRLEGDNARLTANGVLLGNGRRQLDTRLGIEHIARDTACELLWRGIATAR 305
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S + G + + +GA S +LL+ + T P + H AT ++
Sbjct: 306 SRVAFHGGIHIRQGADGSDAQLSNKNLLLSTDAEIDTQPVLVIDADEVKAAHGATVGQLD 365
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
LFY RG+P+E A L+ F RE L+ LP +L+ LE ++
Sbjct: 366 ANALFYLRSRGLPQERAQQLLTAAFCREPLRLLP----TTLGELLATHLERAL 414
>gi|322714429|gb|EFZ06000.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCITYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|148643062|ref|YP_001273575.1| ABC transporter involved in Fe-S cluster assembly, permease
component [Methanobrevibacter smithii ATCC 35061]
gi|148552079|gb|ABQ87207.1| ABC transporter involved in Fe-S cluster assembly, permease
component [Methanobrevibacter smithii ATCC 35061]
Length = 414
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 88/367 (23%), Positives = 148/367 (40%), Gaps = 17/367 (4%)
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
GV T + F V F + V M I A+ ++ VK Y+ VV
Sbjct: 58 VGVDTEEKGRSGSFLQVDQSNIFTNNSMSNSVEVMNIGVALDKYH-WVKDYMWNVVKPDA 116
Query: 186 NFYAALNSAV------FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+ Y +A+ G FV G + + I+++ Q +IIA+E S
Sbjct: 117 DKYT-AKTALREEKDGIKSGYFVRSLPGTKEVFPVQACMFISDEDIMQTAHNVIIAEENS 175
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ + GC + + +H V EL A+I ++ V NW
Sbjct: 176 ELHLITGCATGEDVSSAMHVGVSELYVKPGAKITFTMVHNWAEQVEVRPRTG-------I 228
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ ++ L + YP+ G S F SI ID G++ A
Sbjct: 229 KVEENGTYLNNYILTSPVNTLQSYPTAYCDGANSRAIFQSIQGGKKDSIIDVGSRAYLNA 288
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ I+S+ +S S RG + + +C L++ ++ + +P +E+
Sbjct: 289 PGSRGEIISRAVSQDESQIFARG--HLAGTVPEVKGHLECHGLVLSDDSMIYAVPELEAS 346
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
+++ + HEA KI ++ + Y RGI EE A ++IV GF+ + LP E A E QK+
Sbjct: 347 SANLEMSHEAAVGKIDEDEINYLTSRGITEEEAASMIVRGFLSMDITGLPDELAAETQKM 406
Query: 480 IDISLEG 486
ID+S+ G
Sbjct: 407 IDMSVNG 413
>gi|311279429|ref|YP_003941660.1| FeS assembly protein SufD [Enterobacter cloacae SCF1]
gi|308748624|gb|ADO48376.1| FeS assembly protein SufD [Enterobacter cloacae SCF1]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/414 (17%), Positives = 135/414 (32%), Gaps = 52/414 (12%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDL--YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
++ L + PS + D L + A ++ + D +
Sbjct: 33 LQQMLRLGLPSRKHEDWKYTPLDGLLNGPFVALQTSLSAAQRDGL--------------- 77
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
L V VD F + L+ SG D ++ L
Sbjct: 78 ----ALPLDAFRLVFVDGQF-----CPALSDNLQHSGFTVTV---------DNLRDALPA 119
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLII 234
V + L ++ + + + + R L T + L
Sbjct: 120 AVQSE--VFLHLTESLSATVTHIAVARHQRPAKPLLLLHITQGADGDAVNTAHYRHHL-E 176
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
EGS + +E + + + + + + DNA++ + + + + +
Sbjct: 177 LAEGSEATVIEHYVSLSQARHFTGSRLT-MQVADNAQLHHIKL--------GFENAVSHH 227
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
G + G A+ S L GE + S+A+ + D+ T
Sbjct: 228 FAHNDILLGQDAAAFSNSFLLGGAVLRHNTSARLNGENATLRINSLAMPVKSEVCDTRTW 287
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H SR + K I + + G ++V + A + ++LL+G T P
Sbjct: 288 LEHNKGYCNSRQLHKTIVSDKGRAVFNGVITVAQHAIKTDGQMTNNNLLLGRLAEVDTKP 347
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H AT +I DE LFY RGI ++AA +I+ F E+ + +
Sbjct: 348 QLEIYADDVKCSHGATVGRIDDEQLFYLRSRGIGQQAAQQMIIYAFAAELTEAI 401
>gi|167551663|ref|ZP_02345417.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205323531|gb|EDZ11370.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/412 (17%), Positives = 138/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCVTISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R M L +E T + L
Sbjct: 120 PVQPEVFLHLTESLAQCVTYIQVRRNQRPTMPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|161614214|ref|YP_001588179.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|168463221|ref|ZP_02697152.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442942|ref|YP_002040627.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|200390278|ref|ZP_03216889.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|161363578|gb|ABX67346.1| hypothetical protein SPAB_01957 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401605|gb|ACF61827.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195633913|gb|EDX52265.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|199602723|gb|EDZ01269.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|238910812|ref|ZP_04654649.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|332161646|ref|YP_004298223.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325665876|gb|ADZ42520.1| cysteine desulfurase activator complex subunit SufD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 437
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 15/284 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + +P G L + K T + L I + + +
Sbjct: 142 HLTESLSQQRLHIRLPAGKHSDKPLYLLHISSGKGSEVVNTSHYRHHLAI-EASAQAEVI 200
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E ++ A + + +NAE+ + + P
Sbjct: 201 EHF-VSLNEQPHFTGARLTISVGENAELSHCKLAFETPQSYHFAHN--------DLVLSR 251
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 252 DARAKSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTRTYLEHNKGYCES 311
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K + + G + V + A + ++LL+ T P +E
Sbjct: 312 RQLHKTMVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 371
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I E LFY RGI + A +I+ F E+ + +
Sbjct: 372 CSHGATIGRIDAEQLFYLQSRGINQADAQQMIIFAFAAELTEAI 415
>gi|224584116|ref|YP_002637914.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224468643|gb|ACN46473.1| hypothetical protein SPC_2357 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|197247474|ref|YP_002146667.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197211177|gb|ACH48574.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|147775510|emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
Length = 593
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 78/388 (20%), Positives = 142/388 (36%), Gaps = 19/388 (4%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
+ P + D L+R Y ++ +A ++ ++ D V +
Sbjct: 95 STPWPSRKDEPFRFTDTSLIR-YSQVTPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSN 153
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
+GV +S E + K V + + +LN D + VY+P G R
Sbjct: 154 LSQLPTGVFVGSLSSLPSET--ITKXVSEFVANFEGDLFWSLNGLGTPDMAVVYVPAGCR 211
Query: 210 CPMELSTYFRINEKGT-------GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
M L + E G R ++ +EG + +E ++ V
Sbjct: 212 VEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGENKCYWANTVT 271
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
E+V + A++K+S +Q+ + K +G S ++ TG ++
Sbjct: 272 EVVIGEGAKVKHSYIQSQSLSAAHIKWT--------SVQQGSSSSYELIEVSTGGKLSRH 323
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-SNNTYR 381
+ G + E + +S G Q D ++++ SR + K I A +
Sbjct: 324 NVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAVFD 383
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + V+R A + SLL+ + P ++ H A S + + LFY
Sbjct: 384 GNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFY 443
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLP 469
L RGI E A ++ F EV+++LP
Sbjct: 444 FLARGIDLETARKALIFSFGGEVIERLP 471
>gi|168822238|ref|ZP_02834238.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205341326|gb|EDZ28090.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320086147|emb|CBY95921.1| Protein sufD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 423
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|332704322|ref|ZP_08424410.1| SufBD protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554471|gb|EGJ51515.1| SufBD protein [Desulfovibrio africanus str. Walvis Bay]
Length = 387
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 86/359 (23%), Positives = 150/359 (41%), Gaps = 13/359 (3%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
L REQ +++G+ + F V+ + + GV + I +A+ ++
Sbjct: 23 DLRSLDADDREQLLMSGIDVEEQGRSGSFLHVNHASAYCHT-AHPGVEILDIKDALAKY- 80
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
D +K Y +V + Y + + G FV + KGV+ P + + I TGQ
Sbjct: 81 DGLKDYFWKLVDKDKDEYTRMAAEHLQGGYFVRVKKGVKVPEPVQSCLFIKANRTGQSVH 140
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
++I +E + + + GC + + LH + E NA++ +S V NW
Sbjct: 141 NVVILEEDAELHMITGCAVSKHSKTGLHLGISEFFVGKNAKLTFSMVHNWGEDTEVRPRS 200
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
G ++ L YPS L G + F S+ ++ ID
Sbjct: 201 A-------GIVDEGGVFLNNYILLKPVKSVQMYPSITLAGRGAVARFNSVMVAPKGSHID 253
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
SG +++ A + + I+++ I+ G + RG + A R +C L++G+
Sbjct: 254 SGNRVIMAAPDCKAEIIARTITTGGTIIN-RGD--IQGRAVPGRGHLECKGLILGDG-II 309
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H IP + + L HEA KI+ E + Y + RG+ EE A + IV GF+ + LP
Sbjct: 310 HAIPELYASVEGVELSHEAAVGKIAQEEIEYLMARGMDEEEATSTIVRGFLNVDIMGLP 368
>gi|163840978|ref|YP_001625383.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
gi|162954454|gb|ABY23969.1| FeS assembly ATPase [Renibacterium salmoninarum ATCC 33209]
Length = 403
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 114/291 (39%), Gaps = 16/291 (5%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+V IP+ L +G +I A S + H
Sbjct: 123 IYVRIPENAELTEPLKVTVTGQGEGRRSNAHYVIEAGANSRAVVILDHRGSAD-----HN 177
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
E++ AE+ +VQ W + K+ + G +I
Sbjct: 178 GNAEIIVGQGAELTVVSVQRWDYTAKHLG--------QHDAVVAKDGKLKHVVITLGGSI 229
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNN 378
+ GE + E + + ++ Q ++ T + H N+ S ++ KG G ++
Sbjct: 230 VRLNVNARYAGEGAEAELFGLYFADAGQHLEHRTFIDHNVPNSKSNVLYKGALQGAGAHT 289
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDE 437
+ G V + + A + ++ + +L++ + A ++P +E + H ++T + DE
Sbjct: 290 VWVGDVLIQKQAIGTDSYEKNQNLILTDGARADSVPNLEIETGLIEGAGHASSTGRFDDE 349
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLEGS 487
HLFY + RGI E A L+V G++ EV+QK+ + E ++ LE S
Sbjct: 350 HLFYLMARGISERDARRLVVRGYLNEVIQKIKVPALEEELVAALERELEAS 400
>gi|206901384|ref|YP_002251264.1| ABC transporter, ATP-binding protein [Dictyoglomus thermophilum
H-6-12]
gi|206740487|gb|ACI19545.1| ABC transporter, ATP-binding protein [Dictyoglomus thermophilum
H-6-12]
Length = 411
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 84/416 (20%), Positives = 151/416 (36%), Gaps = 29/416 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A + P+ DL Y S + L+++ E+
Sbjct: 6 LKELREKALKA---KDKPALLGPDI------DLEPYMKTISDIKINDLEELPEEIKENIL 56
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
GI E+E + V KE K + M I EA+ E D +
Sbjct: 57 YSGITPSEEER--------AGTYFQINHSVVYEKLKETY-KGKLEIMSIQEAL-EKYDWL 106
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ Y +V + Y A + T G F+ + + + + I E Q +I
Sbjct: 107 EDYYGRLVKPDTDKYTAWAELLPTGGYFIRVFANQKVEYPVQSCLYIKEGNISQNVHNII 166
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I +E + V GC +++ +H + E ++ ++ + NW
Sbjct: 167 IVEENAEVFVTTGCLTHLKNQPGIHIGISEFFVKKGGKLYFTMIHNWSEEFHVRPRTAV- 225
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
I+ YP+ ++ E + YSI ID G
Sbjct: 226 ------LVEENGVFINNYVSLKPVKSIQSYPTVYVK-ENAIARLYSIIYGRKDSYIDLGG 278
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++ +N+ IVS+ I+ S RG++ A S+ F C +++ N I
Sbjct: 279 RIIFEGENSKGEIVSRIIADDSSQIYSRGELI--GKAKGSKGFLDCRGIILNKNAKIVAI 336
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +++++ L HEA I++E + Y RG ++ A++ I GF+ + LP
Sbjct: 337 PILDAQHPESELSHEAAIGPINEEEIEYLTTRGFDKDEAMSTITRGFLNLEIPGLP 392
>gi|16764722|ref|NP_460337.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994393|ref|ZP_02575485.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|16419892|gb|AAL20296.1| iron-sulfur component of FhuF stability protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|205327745|gb|EDZ14509.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261246580|emb|CBG24390.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993259|gb|ACY88144.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157907|emb|CBW17402.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912357|dbj|BAJ36331.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321223998|gb|EFX49061.1| Iron-sulfur cluster assembly protein SufD [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323129642|gb|ADX17072.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|332988259|gb|AEF07242.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 423
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 137/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F +T V +A+
Sbjct: 79 ---LQIDAVRLVFVDGRFMPELSDSTQNSGFD---VSVRDERQAL-------------AA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHFKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|326794501|ref|YP_004312321.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
gi|326545265|gb|ADZ90485.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
Length = 425
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 67/424 (15%), Positives = 149/424 (35%), Gaps = 40/424 (9%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
E W+ R A + W + A + L + V
Sbjct: 20 EQQWLAPIRAKAISQLKNT---RWPNRKTEAWRYTPLRAVERTLASVK------------ 64
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
E+ ++ V A++ VF + ++ +G+ + S+ +
Sbjct: 65 ------NADAAEKGLVPAVIEGLSAIEVVFVNGEFSEALSTQVLPAGLSIVLGSQ-LDNR 117
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
DL+ + + + LN A+ + ++ + +GV + ++
Sbjct: 118 DDLLDALSE--IKPERHLFGMLNDALVQEVVWIKVAQGVSIDAPIRITNLSSQAAESHV- 174
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST--VQNWYPGDSQG 287
+ + +EG+ V+ LE + L E ++ +++ +Q G
Sbjct: 175 KAFVSVEEGAQVTVLEMAGSNG---QTLSTGFTEYDLAKDSRLEHYRFALQTDDNVSVGG 231
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
G ++++ + GS + + GE + + ++ + +G +
Sbjct: 232 CH----------FRLGEAAQLNSNIIGFGSDLQRLDTDIIYAGENANAKLNAVYLLDGNE 281
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D + H N + +GI A + + G++ +HR A + +LL+ +
Sbjct: 282 LFDLHATVEHAVPNCVTEENIRGIVADRARAVFNGRIHIHRDAQKTLAELNNRNLLMSDK 341
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+T P +E H AT ++I + L+Y RGI A ++ GF+ E++ +
Sbjct: 342 AEINTKPELEIYADDVRCAHGATVAEIDKQALYYLQTRGISRSKAQVMLNFGFINELIDQ 401
Query: 468 LPME 471
+P E
Sbjct: 402 MPNE 405
>gi|57234451|ref|YP_181544.1| sufB/SufD domain-containing protein [Dehalococcoides ethenogenes
195]
gi|57224899|gb|AAW39956.1| sufB/sufD domain protein [Dehalococcoides ethenogenes 195]
Length = 411
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 87/402 (21%), Positives = 164/402 (40%), Gaps = 25/402 (6%)
Query: 84 DDL---YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFD 140
DD+ Y ++ E + G+ + + + +G D
Sbjct: 26 DDILLEKYTDNTDDHKYVNKPSELGAEDKSRMLESGVILDDLKERSGT-------FIQMD 78
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
+ V + +++ G+ M SEA ++ D +K Y V V + Y A DG
Sbjct: 79 NRPVHFSTQQD----GIEIMSTSEAALKY-DWLKDYWWKAVSVDADKYTAHVELNKADGY 133
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
F+ GV+ + + + + Q +IIA+EGS + + GCT+ R E LH
Sbjct: 134 FIRALPGVKTEFPVQSCMYMAKNQAIQNVHNIIIAEEGSELHIITGCTSAHRTETGLHLG 193
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
V E A++ ++ + W P + +S +
Sbjct: 194 VTEFFIKKGAKVTFTMIHTWSPDIAVRPRTG-------AIVEEDGVFLSNYVVMKTVKNL 246
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
YP L GE + F S+ + ++D G+++ A++T + ++++ ++ G +
Sbjct: 247 QSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNARHTRTELITRALTTGGEIIS- 305
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG + + +C L++G+N + IP + K + +L HEA KI++E +
Sbjct: 306 RG--YIEGKVPDCKGHLECRGLILGDNGIIYAIPELMGKVAGVDLSHEAAVGKIAEEEVE 363
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
Y + RG+ ++ A A IV GF+ ++ LP E K I +
Sbjct: 364 YLMARGLNKDEATAAIVRGFLNVDVEGLPPLLKEEMDKAIKL 405
>gi|239831807|ref|ZP_04680136.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
gi|239824074|gb|EEQ95642.1| FeS assembly protein SufD [Ochrobactrum intermedium LMG 3301]
Length = 425
Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats.
Identities = 74/419 (17%), Positives = 141/419 (33%), Gaps = 46/419 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS + DF L AP ++
Sbjct: 40 RDAALESLKENGIPSRRVESWHYTDFRTLLKGVAP-------------------FDTSAG 80
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
++AG + + GV P+ EA+ + + +
Sbjct: 81 TQALPALIAGSSIVAASNGVALAAN----------APQGVSLTPVREALADGSLVTQLRS 130
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D+ +N+A +DG V I G L R +
Sbjct: 131 ----RGFDDTIGQINAAYVSDGWMVSIADGTELEAPLELQNIQKAGQG--HTRFPVRIGA 184
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +E + + +V + D AEI + ++++ +
Sbjct: 185 NVKATIVER--QNGGEGDAFSTSVNHVTVGDGAEILWVILRDFGQATQLSQFNAT----- 237
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+++ + G + + + GE S E + + D + H
Sbjct: 238 ----MGKGSRLTLYIINAGGKLVRQEVHVNVAGEDSDFELRGLNLLADDSHTDVTMTVGH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L +NT S + + + + ++G + V + A + C++LL+ + P +E
Sbjct: 294 LVENTRSTEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +++S ++LFY + RGIPE A L++ F+ E++++L E VEA
Sbjct: 354 IFADDVACGHGATVTELSKDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEA 412
>gi|304414759|ref|ZP_07395741.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
gi|304283157|gb|EFL91569.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Regiella insecticola LSR1]
Length = 452
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 64/435 (14%), Positives = 126/435 (28%), Gaps = 65/435 (14%)
Query: 62 YRRWLTMKDP-----SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
+++ + + P W + D Y + Q D++
Sbjct: 56 WQQVMELGFPHNKHEDWKYTPLDRLLQHDFSYATTSAIRINKQRCDELA----------- 104
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E L + + E K+
Sbjct: 105 -LPLEAHRLVFIDGKWAPSLSDTHCDPYQICVLTE----------------------KEN 141
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--------TGQF 228
L + + L ++ + + + G + L + + + +
Sbjct: 142 LPAAIHPE--IFLHLTESLAQEKVLIRLAAGKKAAKPLYFLHIDSGQTHDNNEKRISSSY 199
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
R ++ + + +E + Q N +A + + DNA++ + +
Sbjct: 200 YRHHLVIEPHASAQVIEHFVSHQHHANFTNARLT-MAVGDNAQLTHCKLAFETAQSYHFS 258
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
G ++ G+ +T + S L GE S+ + +
Sbjct: 259 HN--------DVILGRHARAHSDSFLLGAGLTRHHTSSKLNGEDGDVSINSLLLPLSGEI 310
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
DS + + H + SR + K I + G + V A + ++LL+
Sbjct: 311 ADSRSYLEHNTGHCQSRQLHKMIVQHGGTAVFNGLLKVAPHAVKTDGQMTNNNLLLSQQA 370
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
T P +E H AT +IS E LFY RGI + A +I+ F E+ + L
Sbjct: 371 FVATKPQLEIYADDVKCSHGATVGRISAEQLFYLQSRGINQAKAKKMIIFAFAAELTETL 430
Query: 469 PMEFAVEAQKLIDIS 483
LI
Sbjct: 431 E-------NNLIRQQ 438
>gi|168064389|ref|XP_001784145.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
gi|162664345|gb|EDQ51069.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
Length = 450
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 81/444 (18%), Positives = 147/444 (33%), Gaps = 35/444 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R + + L ++ P+ Y D + +
Sbjct: 29 LAELRYKSAEQALNLRWPTNKDEAYRFTD-------VRFLKNLDIAPTPAQPASVPNFES 81
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+LG+ E L V + +S+S V V + A +
Sbjct: 82 ELGLGETEAFRLVFVDG------VISESLSKVEGLSGGAYVGSVCKITADSAGSALSQAL 135
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ------ 227
+ D+ + LN D V+ PKGV+ + + +G +
Sbjct: 136 EYLGKPAAGTQDDLFTFLNGLGVQDAGLVFAPKGVQLSKPIHVVYYSTGRGGSKDGEEVT 195
Query: 228 -----FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
R L++A+ G+ V +E V E+ + AE+ +S Q
Sbjct: 196 SISLATPRLLVVAESGARVEIIEQFVGAPDQVYW-TNQVCEIYVANGAEVSHSCSQEQER 254
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
K + + +S + E G ++ + G + EF + ++
Sbjct: 255 SAVHIK--------QTHVSQVKKSTYKLVEAEVGGRLSRHNLQVIQLGSDTQTEFSTFSL 306
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-SNNTYRGKVSVHRGAAHSRNFTQCDS 401
S+ Q D ++++ SR + K I + G V V+R A + S
Sbjct: 307 SSKRQVQDLHSRLVLDHPRGISRQIHKCIVTHRLGQAVFDGNVKVNRFAQQTDAGQLSRS 366
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LL+ + P ++ H A S + +E LFY RGI A + +V F
Sbjct: 367 LLLAQGATVNVKPNLQIIADDVKCTHGAAISDLEEEQLFYFQARGIDPLTARSALVFSFG 426
Query: 462 REVLQKLPMEF-AVEAQKLIDISL 484
EVLQ ++ ++L+ SL
Sbjct: 427 AEVLQSFGNDYLKKRLERLVKSSL 450
>gi|288920556|ref|ZP_06414862.1| FeS assembly protein SufD [Frankia sp. EUN1f]
gi|288348049|gb|EFC82320.1| FeS assembly protein SufD [Frankia sp. EUN1f]
Length = 381
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 63/319 (19%), Positives = 116/319 (36%), Gaps = 20/319 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ V+ D A A G V +P + R+ G +E L+
Sbjct: 79 DSRIGRVLTPADRPAA-FAMARSDGGLSVTVPAEAALTEPVVI--RLGGNGGVSYEHVLV 135
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + A VE+ A + + TVQ+W Y+
Sbjct: 136 ELGPFATATVVLDHVGSA-----TFAGNVEVYIGHGAALTFVTVQDWADDSVHLGAHAYS 190
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G +++ + G + P+ RG E Y + + Q +
Sbjct: 191 --------VGRDARLRSFTVTLGGDLVRLNPTVEYRGPGGDAELYGLFFTEAGQHQEHRL 242
Query: 354 KMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H A+N SR+ KG ++ + G V + A + + +L++ + A +
Sbjct: 243 YVDHQARNCRSRVAYKGALQGDGAHAVWIGDVMIGADAVGTDTYELNRNLVLTDGARADS 302
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM- 470
+P +E H + T + DE LFY + RGIP + A L+V GF E++ ++ +
Sbjct: 303 VPNLEILTGEVVGAGHASATGRFDDESLFYLMSRGIPADEARRLVVRGFFAEIVDRIDIP 362
Query: 471 EFAVEAQKLIDISLEGSVG 489
E ++ L +VG
Sbjct: 363 ELRERIMARVEAEL-AAVG 380
>gi|170743212|ref|YP_001771867.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
gi|168197486|gb|ACA19433.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
Length = 439
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 83/418 (19%), Positives = 145/418 (34%), Gaps = 27/418 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + P R A + D + + I
Sbjct: 33 REEAFRFFEAAGLP---HRRVEAFKYSD--------LRAALREAAAPAEPPSPEAARTAI 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E G T + A + V GV +P+ EA+ + L ++
Sbjct: 82 VRAE-----GFATVEAARLTFVNGHLVPALSDLGAMPDGVEVVPLVEALTDGHALTAEFT 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTLIIAD 236
V DN LN+A DG+ + + G R L F + RTL++ +
Sbjct: 137 P-VAQARDNPIYQLNTAFMADGALIRVTAGARPERPLHLRFVGTGAEAFSTATRTLVVLE 195
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ ++ +E P Q + A+ +V D A ++++ + G
Sbjct: 196 GGAALTLVESHEGPDGVGYQPNDALDAVV-GDGATLRHARLNREGGGAVALS-------- 246
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G +S + + TG+A L G ++ + + Q DS
Sbjct: 247 TLSVKLGAKSHLETVNVATGAAFARHQIFLLFAGAEATAQVNGATMLKDGQLGDSTLLAD 306
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A SR K + G + ++GK+ V + A + + D LL+ + P +
Sbjct: 307 HAAPGGISREQFKTVIDGDATGVFQGKIIVAQVAQKTDGKMKSDCLLLSDEGQMMNKPEL 366
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
E H AT ++ LFY + RG+P A L++ F+ E ++ + E A
Sbjct: 367 EIFADDVACGHGATCGAPDEDLLFYLMARGLPRAEAEGLMIQAFLGEAIEAVTHEGAR 424
>gi|21220410|ref|NP_626189.1| hypothetical protein SCO1924 [Streptomyces coelicolor A3(2)]
gi|256788464|ref|ZP_05526895.1| hypothetical protein SlivT_28581 [Streptomyces lividans TK24]
gi|289772355|ref|ZP_06531733.1| FeS assembly protein SufD [Streptomyces lividans TK24]
gi|5459391|emb|CAB50749.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289702554|gb|EFD69983.1| FeS assembly protein SufD [Streptomyces lividans TK24]
Length = 394
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 66/382 (17%), Positives = 129/382 (33%), Gaps = 24/382 (6%)
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
+++ P+ T + + D +V T V + E
Sbjct: 33 ASFDVADFPVPHGREEEWRFTPLERLRGLHDGTAVATG-----DGVKVDVEAPEGVVVET 87
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
+ D A SA + +PK + ++ +G +
Sbjct: 88 VGRDDARIGRAGTPVDRVAAQAYSAF-EKAGVITVPKETVLTEPIRI--AVHGEGGTAYA 144
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
++ + + + + AA V+ V D A++ +VQ+W
Sbjct: 145 HQVVELGAFAEAVVV-----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDDKAVH--- 196
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
V + G + + G + +P G E + + ++ Q
Sbjct: 197 -----VGQHNALVGRDATFKSFVVTFGGDLVRLHPRVAYAGPGGEAELFGLYFTDAGQHQ 251
Query: 350 DSGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+ + H + S V KG ++ + G V + A + + +L++ +
Sbjct: 252 EHRLLVDHNVPHCKSNAVYKGALQGDDAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGA 311
Query: 409 GAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++P +E + H + T + DE LFY + RGIPE A L+V+GF E++Q+
Sbjct: 312 RVDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPELDARRLVVHGFFAELVQQ 371
Query: 468 LPMEFAVE-AQKLIDISLEGSV 488
+ + E I LE SV
Sbjct: 372 IGVADIEERLLAKIAQELEASV 393
>gi|45656530|ref|YP_000616.1| hypothetical protein LIC10632 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599765|gb|AAS69253.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 407
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 80/450 (17%), Positives = 166/450 (36%), Gaps = 63/450 (14%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSL 101
RF+S K EP + ++R + ++ T+K P + I + + P+
Sbjct: 18 RFVSQSK-EPQALKDFRKKVFAKFQTLKIPGSENESWRKIPLSNFH----PEDFTEVPDF 72
Query: 102 DDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMP 161
V ++ + ++ E L+G
Sbjct: 73 AAVVWKIPDL-----VKLQRSETLSG---------------------------------- 93
Query: 162 ISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
E + + + ++ + + FT G ++ I E+ FR+
Sbjct: 94 -----KELENFLNILEGIFQKQNEEWFTLYSLSNFTHGLYLEIGNDFVVQEEIEIKFRLE 148
Query: 222 EKGTGQFERTLIIADEGSY--VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
++ LI+A GS+ + +E + E + + L +++ Y +++
Sbjct: 149 KENKIL---PLIVAKIGSHNKILIVERYECIEEQELKFFQGLSVLQTGAGSKVSYVGIES 205
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
+ I++F D R S + ++ G + L G+ +
Sbjct: 206 FGS-------SIFHFQNLFSDQR-EDSDLKIAKVTPGGYKGKNLLNVDLSGKGARARVIG 257
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+A + DS K++H +T S I+ + +++ + G + +
Sbjct: 258 LAPMAAREFQDSEVKIVHNESHTESSILYRSALKNKAHHIFTGNLRIPNSCKDVNAIQIN 317
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
++LL+ A +IP +E + EH AT +I +E LFY RGI E+ A +IV+G
Sbjct: 318 NNLLLNRTSRAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVDG 377
Query: 460 FVREVLQKLP-MEFAVEAQKLIDISLEGSV 488
F+ +V+ ++ E +LI +EG++
Sbjct: 378 FLGQVIGEIESNSIQEELFRLIARKVEGAI 407
>gi|298530970|ref|ZP_07018371.1| SufBD protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298508993|gb|EFI32898.1| SufBD protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 393
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 89/390 (22%), Positives = 159/390 (40%), Gaps = 13/390 (3%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
P+ +G S D + L+ +L R+Q ++AGV TS+ + +
Sbjct: 10 PRVDLGRYSFDQQEQPALKDLRQLSEADRKQLLMAGVDTSEAQRSGSY-LHVNHSKVHCS 68
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
+ GV + I EA+ + D + +Y V + + + G F+ KG +
Sbjct: 69 SCQKGVEILDIKEAL-DKYDGLPEYYWQAVDKDKDEFTRAAAEKVHGGYFIRTEKGAKIT 127
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ + I + GQ +II +E S + + GCT + LH + E+ +
Sbjct: 128 DPVQSCLFIKGENVGQNVHNIIIVEEDSELHVITGCTTSADVTSALHLGISEIYIKKGGK 187
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ ++ V NW + + S L +P+ L GE
Sbjct: 188 LTFTMVHNWGSEVMVRPRTV-------AIVQEDGVFASNYILLRPVRSVQSFPAVFLNGE 240
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
++ F SI ++ IDSG K++ A +T I+S+ I+ G + + A
Sbjct: 241 RAVASFNSILVAPKGSYIDSGNKIVLNAPDTRGEIISRTITTGGTI---IAPGIIEGNTA 297
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
++ +C L++ H IP +++ L HEA KI+ E + Y + RG+ EE
Sbjct: 298 PAKGHLECKGLVLSEG-IIHAIPELKATVPGVELSHEAAVGKIAQEEIEYLMARGLDEEQ 356
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLID 481
A + IV GF+ + LP E +++ID
Sbjct: 357 ATSTIVRGFMNVDIMGLPAELQASIEEIID 386
>gi|168263801|ref|ZP_02685774.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205347636|gb|EDZ34267.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 423
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 138/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCVTISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRF-----MPDLSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|168233562|ref|ZP_02658620.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472087|ref|ZP_03078071.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194458451|gb|EDX47290.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332336|gb|EDZ19100.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 423
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 73/412 (17%), Positives = 138/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I +L + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATLSAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E + D
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE--RQTLD---------A 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|328952788|ref|YP_004370122.1| SufBD protein [Desulfobacca acetoxidans DSM 11109]
gi|328453112|gb|AEB08941.1| SufBD protein [Desulfobacca acetoxidans DSM 11109]
Length = 406
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 77/375 (20%), Positives = 155/375 (41%), Gaps = 12/375 (3%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
Y+ RE + AG++ + V F + + + + G+ +PI +A+ ++ D
Sbjct: 43 YQSFDDQEREHLLRAGIELTDVDHAGTFLQ-ADRSIMHCKTSQPGLEILPIKDALQKY-D 100
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+K+Y +V V + Y A +G F+ G R + I +G Q
Sbjct: 101 GLKEYYWQLVAVDADKYTAAAELALDNGYFIRALPGARISQPVEACLYIRTEGAAQHVHN 160
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+++A+ GS++ + GCT + LH + E A + ++ V NW I
Sbjct: 161 IVVAEPGSHLHIITGCTTHPGVTSGLHLGISEFFVKKGAHLTFTMVHNWAE-------NI 213
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ IS + YP+ L GE + S+ + + ++D
Sbjct: 214 HVRPRSAIIVEEGGVYISNYIVLKPVKSVQMYPTARLIGEGAVARMNSVVVGHPGTELDL 273
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
G ++ A NT + ++++ ++ G RG + + +C L++ +
Sbjct: 274 GGRVFLEAPNTKAEVIARTVTTGG-TVISRG--HLIGKVPQVKAHLECRGLILAPKGIIY 330
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P + + + + HEA +I+ E + Y + RG+ EE A + IV GF+ ++ LP
Sbjct: 331 AVPELTGEVAGVEMSHEAAVGRIAQEEIEYLMARGLTEEEAASTIVRGFLNVEIEGLPQA 390
Query: 472 FAVEAQKLIDISLEG 486
+ ++ I + +G
Sbjct: 391 LRDDIERTIQETEKG 405
>gi|284006308|emb|CBA71544.1| cysteine desulfurase activator complex subunit [Arsenophonus
nasoniae]
Length = 465
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 55/294 (18%), Positives = 97/294 (32%), Gaps = 14/294 (4%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-----FERTLIIADE 237
V D + L ++ + + + L + R +
Sbjct: 164 VNDEIFLYLTESLAAQPLLIKLAANQQVEKPLYILNITSGSNRADYVNTSHYRYHLEIGA 223
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+E + + + + DN+ + + +
Sbjct: 224 NCKSQVIEHFVSIDDKPHLTGSRLTA-NIGDNSHFSHIKLSVENNQSNHFAHN------- 275
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S+I + + GSA+ + S L G S S+ + + +DS T + H
Sbjct: 276 -DILSGRDSQIKSSGIFIGSALLRHHTSVKLNGAGSRLALNSLLLPQNREIVDSRTYLEH 334
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I+ S + G + V A + ++LL+G T P +E
Sbjct: 335 NQPFCKSRQLHKTIAQDESKAVFNGMIKVAPPALKTDGQMTNNNLLLGKYAEIDTKPQLE 394
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE LFY RGI A +I+ F EV++ + E
Sbjct: 395 IYADDVKCSHGATVGRIDDEQLFYLRSRGIHLNDAKHMIMVAFAAEVIEAIDNE 448
>gi|71897637|ref|ZP_00679882.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
gi|71732540|gb|EAO34593.1| FeS assembly protein SufD [Xylella fastidiosa Ann-1]
Length = 422
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 68/408 (16%), Positives = 130/408 (31%), Gaps = 34/408 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A P +R + L P + +DP L T I
Sbjct: 20 RRQALEDARRDGLPD---LRSETWKYTSLRTLERRHFTQAPTAATAIDPTWLNT-----I 71
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P + G + ++ + + A D
Sbjct: 72 PTPRLVFVNGRHSPSLSNLSGLPQGMTLHPL---------------SAPPREQDKGLHRS 116
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERTLIIA 235
D +A LN+A+ +G + + + + + F R I
Sbjct: 117 PPHFKHRDETFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLRNQIEL 176
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G+ + +E L+ + + A ++++ +QN
Sbjct: 177 HRGASLQLIEHQLHTGH-AAHLNNVLTRIHLASGACLEHARLQNDA--------TATTSF 227
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ ++ +E G+ ++ + L G+ + I + + + +D+ +
Sbjct: 228 LRTDAVLAQDAEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHI 287
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+A+NT S ++ +GI S + G + +H+GA S +LL+ N T P
Sbjct: 288 EHIARNTASELLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPV 347
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H AT ++ + LFY RGIP A L+ F E
Sbjct: 348 LIINADEVQAAHGATVGQLDPQALFYLRTRGIPHTTAQQLLSAAFCHE 395
>gi|168240881|ref|ZP_02665813.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194451686|ref|YP_002045377.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194409990|gb|ACF70209.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339301|gb|EDZ26065.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 423
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 136/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLIHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQSHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|158313921|ref|YP_001506429.1| FeS assembly protein SufD [Frankia sp. EAN1pec]
gi|158109326|gb|ABW11523.1| FeS assembly protein SufD [Frankia sp. EAN1pec]
Length = 381
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 65/319 (20%), Positives = 118/319 (36%), Gaps = 20/319 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ V+ D A A G V +P + R N G +E L+
Sbjct: 79 DSRIGRVLTPADRPAAFAI-ARSDGGLSVTVPAEAALTEPVVVNLRGN--GGVCYEHVLV 135
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + T A VE+ A + + TVQ+W Y+
Sbjct: 136 ELGPFATATVVLDHTGSA-----TFAGNVEVFIGHGAALTFVTVQDWSADSVHLGAHAYS 190
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G +++ + G + P+ RG E Y + + Q +
Sbjct: 191 --------VGRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELYGLFFTEAGQHQEHRL 242
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H A++ SR+ KG G ++ + G V + A + + +L++ + A +
Sbjct: 243 LVTHEARSCRSRVTYKGALQGEGAHAVWIGDVVIGADAVGTDTYELNRNLVLTDGARADS 302
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM- 470
+P +E H + T + DE LFY + RGIP + A L+V GF E++ ++ +
Sbjct: 303 VPNLEILTGEVAGAGHASATGRFDDEALFYLMSRGIPADEARRLVVRGFFAEIIDRVDLP 362
Query: 471 EFAVEAQKLIDISLEGSVG 489
E ++ L +VG
Sbjct: 363 ELRERIMSRVEEEL-AAVG 380
>gi|290961354|ref|YP_003492536.1| hypothetical protein SCAB_70041 [Streptomyces scabiei 87.22]
gi|260650880|emb|CBG73997.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 397
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 58/303 (19%), Positives = 113/303 (37%), Gaps = 18/303 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + +PK + ++ +G F +I + +
Sbjct: 103 DRVAAQAYSAFERAGVITVPKETVLTEPIRI--AVHGEGGTAFAHQVIELGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ V D A++ +VQ+W V + G
Sbjct: 160 ----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDDKAVH--------VAQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P G E + + ++ Q + + H + S
Sbjct: 208 ASFKSVVVTFGGDVVRLHPRVSYAGTGGEAELFGLYFTDAGQHQEHRLLVDHNVPHCKSN 267
Query: 366 IVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+V KG G ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 VVYKGALQGEGAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP-MEFAVEAQKLIDI 482
H + T + DE LFY + RGIP + A L+V GF E++Q++ + ID
Sbjct: 328 GAGHASATGRFDDEQLFYLMARGIPADEARRLVVRGFFAELVQQIGVDDIQDRLLAKIDE 387
Query: 483 SLE 485
LE
Sbjct: 388 ELE 390
>gi|292488155|ref|YP_003531036.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
gi|292899365|ref|YP_003538734.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Erwinia amylovora ATCC 49946]
gi|291199213|emb|CBJ46328.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Erwinia amylovora ATCC 49946]
gi|291553583|emb|CBA20628.1| FeS assembly protein SufD [Erwinia amylovora CFBP1430]
Length = 426
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 74/424 (17%), Positives = 131/424 (30%), Gaps = 47/424 (11%)
Query: 60 LAYRRWLTM---KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
A + W + P+ + + L + V PE L
Sbjct: 29 QAQQHWQQLLRTGLPT---RKQEDWKYTPL---------DQLLNNQFVMPEPAA----LD 72
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ L V +D F + + A E +L +
Sbjct: 73 AEAIKALALPIDAVRLVFIDGRFSPEL------SDSEHDLFTIRIAQSA--ERRELSE-- 122
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ----FERTL 232
PV + L ++ +F+ + +G L + G+ R
Sbjct: 123 -----PVHPEVFLHLTESLAEQVTFMQLARGKAAARPLYLLHISSGSTAGELNTSHYRHH 177
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ DE + + +E A +NA + + +
Sbjct: 178 LQLDEAAEATVIEHYL-SLDAAPHFTGARFTAEVGNNAALTHYNLAFEDRSSYHLSHNDL 236
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
G +++ G+ +T + S L GE S S+ + + DS
Sbjct: 237 TL--------GRDTRVQSHSFLLGAGLTRHHTSTRLDGEGSFLAINSLMLPMDKEVCDSR 288
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H SR + K I + + G + V + A + ++LL+G T
Sbjct: 289 TWLEHNKGYCQSRQLHKTIVRDRARAVFNGIIKVAKHALKTDGQMNNNNLLLGRLAEVDT 348
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P +E H AT +I +E +FY RGI E AA +I+ F E+ + + E
Sbjct: 349 KPQLEIYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDET 408
Query: 473 AVEA 476
EA
Sbjct: 409 LKEA 412
>gi|311739473|ref|ZP_07713308.1| FeS assembly protein SufD [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305289|gb|EFQ81357.1| FeS assembly protein SufD [Corynebacterium pseudogenitalium ATCC
33035]
Length = 384
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 62/318 (19%), Positives = 111/318 (34%), Gaps = 20/318 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ L V D A ++ +G V I + + + +G F T I
Sbjct: 77 DERLGRVGTPSDRVAAQAWTS-MPEGQVVTIDAEAQVEEPVVITYTGKGEGVTSFGATSI 135
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + + + HA VE + D A + +W +
Sbjct: 136 EVGHHAEATVI-----LKYVGSGTHADNVEFIVGDGAHLTVVVDVDWEDDAVHLSNHVAQ 190
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G S + G + P + E + ++ Q ++
Sbjct: 191 L--------GRDSVLRHNSAIFGGEVVRIVPRVNFTEQGGDAELLGVYFADEGQYFENRM 242
Query: 354 KMLHLAKNTTSRIVSKGISAG----FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H N S ++ KG G + + G V + A + + ++L++
Sbjct: 243 LVDHSVPNCRSHVLYKGALQGTKDNEARTCWVGDVLIRSNAQGTDTYETNNNLILTEGAR 302
Query: 410 AHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A IP +E + H AT + D LFY + RGIPE A LI+ GF EV+ ++
Sbjct: 303 ADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFNEVIHRI 362
Query: 469 PME-FAVEAQKLIDISLE 485
P++ + E + I LE
Sbjct: 363 PVQSLSEELENRISEELE 380
>gi|255325013|ref|ZP_05366119.1| FeS assembly protein SufD [Corynebacterium tuberculostearicum
SK141]
gi|255297578|gb|EET76889.1| FeS assembly protein SufD [Corynebacterium tuberculostearicum
SK141]
Length = 384
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 62/318 (19%), Positives = 111/318 (34%), Gaps = 20/318 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ L V D A ++ +G V I + + + +G F T I
Sbjct: 77 DERLGRVGTPSDRVAAQAWTS-MPEGQVVTIDAEAQVEEPVVITYTGKGEGVTSFGATSI 135
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + + + HA VE + D A + +W +
Sbjct: 136 EVGHHAEATVI-----LKYVGSGTHADNVEFIVGDGAHLTVVVDVDWEDDAVHLSNHVAQ 190
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G S + G + P + E + ++ Q ++
Sbjct: 191 L--------GRDSVLRHNSAIFGGEVVRIVPRVNFTEQGGDAELLGVYFADEGQYFENRM 242
Query: 354 KMLHLAKNTTSRIVSKGISAG----FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H N S ++ KG G + + G V + A + + ++L++
Sbjct: 243 LVDHSVPNCRSHVLYKGALQGTKDNEARTCWVGDVLIRSNAQGTDTYETNNNLILTEGAR 302
Query: 410 AHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A IP +E + H AT + D LFY + RGIPE A LI+ GF EV+ ++
Sbjct: 303 ADAIPNLEIETGEITGAGHAATVGRFDDIELFYLMSRGIPEAEARRLIIRGFFNEVIHRI 362
Query: 469 PME-FAVEAQKLIDISLE 485
P++ + E + I LE
Sbjct: 363 PVQSLSEELENRISEELE 380
>gi|86740366|ref|YP_480766.1| FeS assembly protein SufD [Frankia sp. CcI3]
gi|86567228|gb|ABD11037.1| Iron-regulated ABC transporter permease protein SufD [Frankia sp.
CcI3]
Length = 419
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 106/272 (38%), Gaps = 18/272 (6%)
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
R G + L+ + + + T +A VE+ A + + T+Q
Sbjct: 142 RRGSPGGVAYGHVLVEVGPFASATVVLDHTGSA-----TYAGNVEVYVGHGASLTFITLQ 196
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+W Y+ G +++ + G + P+ RG E Y
Sbjct: 197 DWDDDAVHLGAHAYSL--------GRDARLRSFTITLGGDLVRLNPTVDYRGPGGDAELY 248
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFT 397
+ ++ Q + + H ++ SR+ KG ++ + G V + GA + +
Sbjct: 249 GVFFTDAGQHQEHRLLVTHEPRSCRSRVTYKGALRGDAAHAVWIGDVLIGAGAVGTDTYE 308
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+L++ + A ++P +E H + T + DE LFY RGI E A L+
Sbjct: 309 LNRNLVLTDGARADSVPNLEILTGEVTGAGHASATGRFDDEALFYLQSRGISPEEARRLV 368
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
V+GF E++ ++ + E ++ I I + G +
Sbjct: 369 VHGFFAEIIDRIDVP---ELRERIMIKIAGEL 397
>gi|21554655|gb|AAM63647.1| unknown [Arabidopsis thaliana]
Length = 475
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 77/386 (19%), Positives = 136/386 (35%), Gaps = 18/386 (4%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
P P D E + R EIL + ++ + D T
Sbjct: 84 PSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFTNAVIIDGFVSNLTIGPS 143
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
GV F S E + + +++ + A D +Y+P+G +
Sbjct: 144 DLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA--PDLMVIYVPEGCKVE 201
Query: 212 MELSTYFRINEKGT-------GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
+ + E G R ++ +EG +S +E + V+E+
Sbjct: 202 NPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEISIVEEFVGKDEEGFYWTNPVLEV 261
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V NA++K+S +Q + K + FV + S+ ++ TG +
Sbjct: 262 VVQKNAKLKHSYLQKESMASAHIK---WTFVRQ-----EAESEYELVEVSTGGKLGRHNV 313
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGK 383
G + E + + Q +D +K++ SR + K I A S + G
Sbjct: 314 HVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSGQAVFDGN 373
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V V+R A + SLL+ + P ++ H A S + ++ LFY
Sbjct: 374 VRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQLFYFQ 433
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLP 469
RGI E A +++ F EV++K P
Sbjct: 434 ARGIDLETARRALISSFGSEVIEKFP 459
>gi|322616756|gb|EFY13665.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619984|gb|EFY16857.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622295|gb|EFY19140.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322627818|gb|EFY24608.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633083|gb|EFY29826.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636671|gb|EFY33374.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641304|gb|EFY37945.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644928|gb|EFY41461.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650233|gb|EFY46647.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322660134|gb|EFY56373.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665300|gb|EFY61488.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669557|gb|EFY65705.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673483|gb|EFY69585.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677411|gb|EFY73475.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679926|gb|EFY75965.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687398|gb|EFY83370.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192351|gb|EFZ77582.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198630|gb|EFZ83731.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203111|gb|EFZ88142.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323208676|gb|EFZ93614.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323213809|gb|EFZ98587.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217653|gb|EGA02368.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222898|gb|EGA07249.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227190|gb|EGA11363.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323229455|gb|EGA13578.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232678|gb|EGA16774.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240284|gb|EGA24328.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242728|gb|EGA26749.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323245939|gb|EGA29927.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252817|gb|EGA36654.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323255204|gb|EGA38982.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260084|gb|EGA43709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267151|gb|EGA50636.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323271525|gb|EGA54946.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 423
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 136/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEAKVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|326780045|ref|ZP_08239310.1| FeS assembly protein SufD [Streptomyces cf. griseus XylebKG-1]
gi|326660378|gb|EGE45224.1| FeS assembly protein SufD [Streptomyces cf. griseus XylebKG-1]
Length = 393
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 59/306 (19%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V + K + ++ +G + LI + +
Sbjct: 103 DRVAAQAYSSFEQASIVTVAKEAVLTEPIRI--AVHGEGGTAYGHQLIQLGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ V D A++ +VQ+W V + G
Sbjct: 160 ----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDDTAVH--------VGQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P E + + ++ Q + + H + S
Sbjct: 208 ASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHRLLVDHNTPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 AVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY RGIP E A L+V GF E++Q++ + E + I+
Sbjct: 328 GAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGLPDVEERLIEKIEA 387
Query: 483 SLEGSV 488
L+ SV
Sbjct: 388 ELKASV 393
>gi|182439389|ref|YP_001827108.1| hypothetical protein SGR_5596 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467905|dbj|BAG22425.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 393
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 59/306 (19%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V + K + ++ +G + LI + +
Sbjct: 103 DRVAAQAYSSFEQASIVTVAKEAVLTEPIRI--AVHGEGGTAYGHQLIQLGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ V D A++ +VQ+W V + G
Sbjct: 160 ----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDDTAVH--------VGQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P E + + ++ Q + + H + S
Sbjct: 208 ASFKSIVVTFGGDVVRLHPRVAYAATGGEAELFGLYFTDKGQHQEHRLLVDHNTPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 AVYKGALQGDGAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY RGIP E A L+V GF E++Q++ + E + I+
Sbjct: 328 GAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGLPDVEERLIEKIEA 387
Query: 483 SLEGSV 488
L+ SV
Sbjct: 388 ELKASV 393
>gi|266624778|ref|ZP_06117713.1| FeS assembly protein SufB [Clostridium hathewayi DSM 13479]
gi|288863343|gb|EFC95641.1| FeS assembly protein SufB [Clostridium hathewayi DSM 13479]
Length = 247
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 88/256 (34%), Positives = 139/256 (54%), Gaps = 11/256 (4%)
Query: 6 ETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRW 65
E V ID Y + +GL I+ IS +KN+P WM +RL + + +
Sbjct: 2 EEKTYVNDIDRSIYDIR-NEETDAYRIEEGLKPAIVEQISKEKNDPLWMELFRLKSLQIY 60
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
+M+ P W +D + Y P + + + DV + T+E+LGIP E++ L
Sbjct: 61 NSMEVPDWGP-SLEGLDMSHIATYVRPGTKMKTK-WSDVPEAIKDTFERLGIPQAERKSL 118
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC-EHPDLVKKYLSTVVPVG 184
AG V A +DS V ++E+ + GV++ + A+ ++ D+VKK+ +V
Sbjct: 119 AG-------VGAQYDSELVYHNVRQEVAELGVVYTDLESALKGDYADMVKKHFMKLVKPS 171
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D+ +AAL+ AV++ GSFVY+P GV + L +YFR+N G GQFE TLII DEG+ + ++
Sbjct: 172 DHKFAALHGAVWSGGSFVYVPPGVSVEIPLQSYFRLNAPGAGQFEHTLIIVDEGASLHFI 231
Query: 245 EGCTAPQRDENQLHAA 260
EGC+AP+ + LHA
Sbjct: 232 EGCSAPKYNVANLHAG 247
>gi|121602832|ref|YP_989102.1| FeS assembly protein SufD [Bartonella bacilliformis KC583]
gi|120615009|gb|ABM45610.1| FeS assembly protein SufD [Bartonella bacilliformis KC583]
Length = 421
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 76/414 (18%), Positives = 162/414 (39%), Gaps = 51/414 (12%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + K PS + + +L S + + LL E +
Sbjct: 35 RRRAIELFQKTKLPS---RKIENWHYTNLRTLLKSVSDFSEINNKKLVNPLLS--ENIIF 89
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
I+ + L + + + V + DL+++
Sbjct: 90 SIQNGKALTQSKIANITV-------------------------------KKIADLLEEND 118
Query: 178 STVVP---VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ ++ D+F LN+A TDG IP+ + + + + F I
Sbjct: 119 TKIIDQVIADDDFIGQLNTAFVTDGWIFQIPENTKLDIPIELQNIQMSGQSHIFSE--IK 176
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
++ S ++ +E D+N L +++ L ++++ + +++ F
Sbjct: 177 VEKNSQITMIER--QIGNDQNSLVSSICSLNVAAHSDVTWILIRD-------RGMNSTQF 227
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
R G +K+S + GS + + L+ +++ + I + +G D
Sbjct: 228 GRFR-AVLGENAKLSLYIINIGSQLNRQEIDIELQEKEADFQLRVINLLSGQTHSDITMN 286
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+LH+ + TTS + + + ++ ++G + V + A + C+SL++ ++ + P
Sbjct: 287 VLHVEEGTTSTEIIRNVITDKAHGVFQGMIRVAKKAQKTDARMACNSLILSDDAEFYAKP 346
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E + H AT +KI+ +HLFY + RGI + A AL++ GFV E++ +
Sbjct: 347 ELEIFADDVSCGHGATVTKINRDHLFYLMARGISFKTARALLIKGFVSELIDDI 400
>gi|240140794|ref|YP_002965274.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|240010771|gb|ACS41997.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
Length = 440
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 87/418 (20%), Positives = 145/418 (34%), Gaps = 27/418 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + PS R A + DL AA P D G
Sbjct: 34 REEAFRFFEATGLPS---RRVEAFKYTDLR--AAITEAAPPAEAPSEDAARAAVAGTAGF 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L V VA + D V GV P++EA+ + +K L
Sbjct: 89 NEVEAVRLTFVNGHLVASLSDLDRVP-----------EGVTVTPLNEAMGKGDARLK-LL 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-GQFERTLIIAD 236
+ V V +N LN+A DG+ + + G + + F + R L+
Sbjct: 137 APVEQVRENPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGETAFSTATRVLVDVG 196
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ LE P Q + A+ ++ A +++ +
Sbjct: 197 AEAEFFLLESHEGPAGLTYQPNDAL-DVHIGAEAAFRHTRLNREGDAAVALS-------- 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
R+++ L TG+ ++ + GE + + Q DS
Sbjct: 248 TLSVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLLAD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A R + K + G S ++GK+ V + A + + D LL+ ++ P +
Sbjct: 308 HAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
E H AT ++ LFY + RG+P A +L+V FV E ++ + E A
Sbjct: 368 EIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
>gi|261343986|ref|ZP_05971631.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
gi|282568377|gb|EFB73912.1| FeS assembly protein SufD [Providencia rustigianii DSM 4541]
Length = 435
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 66/392 (16%), Positives = 128/392 (32%), Gaps = 28/392 (7%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
++ Y +LRT P + A + A + V
Sbjct: 48 EIAKYVGLPKFRHEDWHYTPLETVLRTQYHFSDPESVLKPNADIALEIDA----YRITLV 103
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
+ EL + + + D++ +++ + + L + + +
Sbjct: 104 DGRYNAELSS--IDMGEFQVTLLDSQDVLPDAVNSEI------FLHLTECLAPQPLLINL 155
Query: 205 PKGVRCPMELSTYFRINEK------GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
L + Q+ L S +E ++ L
Sbjct: 156 AANKVASKPLYLLNISSGSVNSQGTNMSQYRYHL-TLGNNSQSEVIEHF-VSLDNQPHLT 213
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ + DNA++ + + P G S++ + G+
Sbjct: 214 GGRLTVEIGDNAQLSHFKLVTENPSAQHFAHN--------DMIVGRDSQVKSSSFLLGAG 265
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+ + S L GE + E S+ + G + D+ + + H A +SR + K I S
Sbjct: 266 LLRHHTSSRLEGENTQFELNSLVLPQGTEIADTRSYLEHNACYCSSRQLHKVIGMDSSKT 325
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+ G + V A + ++LL+G T P +E H AT ++ DE
Sbjct: 326 VFNGMIKVAPNALKTDGQMTNNTLLLGEKAEIDTKPQLEIYADDVKCGHGATVGRMDDEQ 385
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
LFY RGI +AA +I+N F E+ + + +
Sbjct: 386 LFYLRSRGISHQAAKQMIINAFAAELTESIDI 417
>gi|99081087|ref|YP_613241.1| SufBD [Ruegeria sp. TM1040]
gi|99037367|gb|ABF63979.1| SufBD [Ruegeria sp. TM1040]
Length = 426
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 74/400 (18%), Positives = 135/400 (33%), Gaps = 43/400 (10%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
TM P R + P +L D ++ P+ +
Sbjct: 38 QTMGLPD---RRDEYWKYT------------RPDTLTAADAPAAAVFDSGEAPMFDN--- 79
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLS----TVV 181
+ V VD VFD+ + ++L GV +++ + K
Sbjct: 80 -FDRLRIVFVDGVFDAEA-----SDDLALEGVSIERLADIDRKDIHWAKDIYGVLEARGQ 133
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
+ AALN+A TDG +++ + ++ ++ + + +I D G+
Sbjct: 134 SPVERPLAALNTAFATDGVVIHVTG--KPSKPINLVYQHASENSDAILHHVIKVDSGAEA 191
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
+ LE A R +E+ D ++ Q G + + +
Sbjct: 192 TILENGPAASRF-----NKAMEIDIADTGKLHLVRAQ----GRDHERRAATHLFAR---- 238
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G S L +T G+ + + +G D + H A N
Sbjct: 239 LGTESVFKSFTLTVNGVLTRNEAVVEFLGDDAVAHLAGACVGDGDFHHDDTVFVTHDAVN 298
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
SR V K + + ++GK+ V GA + + SLL+ ++ P +E
Sbjct: 299 CESRQVFKKVLRNGATGVFQGKILVKEGAQKTDGYQISQSLLLDDDSQFLAKPELEIYAD 358
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
H +T+ I ++ LFY RG+PE A L+ F+
Sbjct: 359 DVACSHGSTSGAIDEDGLFYLRSRGVPEAEATDLMTLAFL 398
>gi|163853378|ref|YP_001641421.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
gi|163664983|gb|ABY32350.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
Length = 440
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 88/418 (21%), Positives = 145/418 (34%), Gaps = 27/418 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + PS R A + DL AA P D E G
Sbjct: 34 REEAFRFFEATGLPS---RRVEAFKYTDLR--AAITEAAPPAEAPSEDAARAAVAETTGF 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L V VA + D V GV P++EA+ + +K L
Sbjct: 89 NAVEAVRLTFVNGHLVASLSDLDRVP-----------EGVTVTPLNEAMGKGDARLK-LL 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-GQFERTLIIAD 236
+ V V N LN+A DG+ + + G + + F + R L+
Sbjct: 137 APVEQVRQNPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGEAAFSTATRVLVDVG 196
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ LE P Q + A+ ++ A +++ +
Sbjct: 197 AEAEFFLLESHEGPAGLTYQPNDAL-DVHIGAEAAFRHTRLNREGDAAVALS-------- 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
R+++ L TG+ ++ + GE + + Q DS
Sbjct: 248 TLSVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLLAD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A R + K + G S ++GK+ V + A + + D LL+ ++ P +
Sbjct: 308 HAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
E H AT ++ LFY + RG+P A +L+V FV E ++ + E A
Sbjct: 368 EIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
>gi|301064804|ref|ZP_07205178.1| SufB/sufD domain protein [delta proteobacterium NaphS2]
gi|300441098|gb|EFK05489.1| SufB/sufD domain protein [delta proteobacterium NaphS2]
Length = 408
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 88/428 (20%), Positives = 157/428 (36%), Gaps = 30/428 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+++L A P +D P + + L ++ E
Sbjct: 6 QFQLKAKEAMDK------EGAIGPDVDLSAFDPAPLPHREMADEDLVNLPEEERTQLLMA 59
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
G+ + E+E + + +E G+ + I +A+ E D ++
Sbjct: 60 GLDVTEKER-------GGTFLQMNHRAVHCHSSQE-----GIEVLSIQKALEE-HDWIRD 106
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
Y + VG + Y A DG + G + + ++E G Q +I+A
Sbjct: 107 YYWKLADVGTDKYTAAAQLGLHDGYVIRSLPGRKSVYPIQACLYMHEDGMQQNVHNIIVA 166
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+E S + + GC + LH + E NA+I ++ + NW +
Sbjct: 167 EEDSELHIISGCATSPHLKRGLHVGISEFFVKKNAKITFTMIHNWAEEVVVRPRSV---- 222
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
++ YP+ L G+ + FYSI + + + D G ++
Sbjct: 223 ---ARVEEGGLFVNNYVSMKPVRSIQMYPTTHLVGKDAVARFYSIVVGSPGSEYDLGGRI 279
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+ K + IV++ IS G RG + + +C LL+ N H IP
Sbjct: 280 ILKEKGNRAEIVARTISNGAKI-IARG--HLVGEVPDIKAHLECKGLLL-NGGVIHAIPE 335
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E + HEA KI+ E + Y + RG+ EE A + IV GF+ + LP + E
Sbjct: 336 LEGHADGVEMSHEAAVGKIAQEEISYLMSRGLNEEEATSTIVRGFLSVDIPGLPPQLQAE 395
Query: 476 AQKLIDIS 483
+ I+ S
Sbjct: 396 IDRAIEES 403
>gi|302868769|ref|YP_003837406.1| FeS assembly protein SufD [Micromonospora aurantiaca ATCC 27029]
gi|302571628|gb|ADL47830.1| FeS assembly protein SufD [Micromonospora aurantiaca ATCC 27029]
Length = 380
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 60/314 (19%), Positives = 112/314 (35%), Gaps = 17/314 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ +V+ D A L V + + + F T +
Sbjct: 76 DPRVGSVLTPFDRVSA-LAYGGADGALLVRVDRDAVVEQPVRLRVVGENAEALAFGHTFV 134
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
D + + + + VE+ D A++ TV +W Q +
Sbjct: 135 EVDRFAEATVVIEHVGSATLADN-----VEVTVGDGAKLTLVTVADWADDAVQAQHL--- 186
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G ++I Q+ G + +Y S E Y + ++ Q ++
Sbjct: 187 -----KVRLGRDARILHVQVSLGGDLVRQYTSVEYTQRGGEAELYGVYFADSGQHLEHRQ 241
Query: 354 KMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H + S + +G ++ + G V + A + + +LL+ + A +
Sbjct: 242 LVDHTVPDCRSNVGYRGALQGDDAHTVWVGDVLIRAEATGTDTYEINRNLLLTDGARADS 301
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY + RGIPE A L+V GF E++ K+P+E
Sbjct: 302 VPNLEIETGEIAGAGHASATGRFDDEQLFYLMARGIPEAEARRLVVRGFFAELINKIPVE 361
Query: 472 FAVE-AQKLIDISL 484
E I+ L
Sbjct: 362 DLRERLGDAIEARL 375
>gi|170290005|ref|YP_001736821.1| cysteine desulfurase activator SufB [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174085|gb|ACB07138.1| Cysteine desulfurase activator SufB [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 387
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 144/333 (43%), Gaps = 19/333 (5%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF-TDGSFVYIPKGVRCPME 213
GV + +S+A+ E LV+ Y V V + Y A +G +G +
Sbjct: 66 PGVKVLTLSQALEEG--LVQDYFWNAVKVDTDKYTAAAELFGGHEGYVFIAERGRKVEQP 123
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ + ++ G+ Q ++I +EG+ + + GC LHA + E + +
Sbjct: 124 VLSCLLLSTPGSLQAPHNIVIVEEGAELHVITGCLTSAEAP-GLHAGISEFYVKEGGRLT 182
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS--KISWTQLETGSAITWKYPSCLLRGE 331
++ + W P + V R R +S + A P L GE
Sbjct: 183 FTMIHQWAP---------TSHVRPRTGVIVERGGEYVSHYINMSPIASLQTDPKVYLVGE 233
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ S+ ++ ++D G + A+NT++ IVSK I+ ++ R +
Sbjct: 234 GAKAYLSSVIVAPRESKMDVGGSVFLRAENTSAEIVSKVITKDRADVITRSL--ISAEGR 291
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+R +CD LL+ ++ T+P +++K L HEA ++S+E L+Y + +G EE
Sbjct: 292 GARGHIECDGLLLSDSSRILTLPALDAKIDDVQLSHEAAVGRLSEEQLYYLMTKGFSEEE 351
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
A +++V GF+ ++ LP VEAQ + + L
Sbjct: 352 AKSILVRGFMEVKIEGLPRP--VEAQLKMALEL 382
>gi|13470345|ref|NP_101911.1| hypothetical protein mlr0020 [Mesorhizobium loti MAFF303099]
gi|14021084|dbj|BAB47697.1| mlr0020 [Mesorhizobium loti MAFF303099]
Length = 430
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 86/423 (20%), Positives = 151/423 (35%), Gaps = 47/423 (11%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
ML+ R A P+ R + + DL D + +
Sbjct: 42 MLK-RDDAIEAI-KHGLPT---RRVESWHYTDLRRLL-------SVVPDFDPAAMAKAIA 89
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
+ +L G +KV S+ + G+ +AI
Sbjct: 90 PIVEGSAVLPVLNGKSDAKVPALDGVTVQSLSEKLIDGSIAPGLDSYGSDDAI------- 142
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
ALN+A DG FV I G + T R +
Sbjct: 143 ---------------GALNTAFVADGYFVDIADGTELEKPIELQNVQAGGQT--HVRLAV 185
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ +E L ++V +LV ++AE+ + VQ
Sbjct: 186 RVGAGAKAVIVERQAGDG---AALVSSVSQLVLGEDAEVTWLIVQEQPDTA--------T 234
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + G +K++ + G + + GE + + I + G D
Sbjct: 235 HLAQFKAHIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTM 294
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H +TTS V + + G + ++G+++VH+ A + C++LL+ ++ T
Sbjct: 295 VLDHAVPHTTSTEVIRNVVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTK 354
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H AT ++I +HLFY + RG+ E++A L+V FV EV+++L E
Sbjct: 355 PELEIFADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDETI 414
Query: 474 VEA 476
VEA
Sbjct: 415 VEA 417
>gi|78356489|ref|YP_387938.1| hypothetical protein Dde_1444 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218894|gb|ABB38243.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 386
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 75/381 (19%), Positives = 152/381 (39%), Gaps = 13/381 (3%)
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
D + + L +++ + AG+ ++ + F + + ++ G+ M
Sbjct: 11 FDGGTADSIADLTTLSNEDKQRLLYAGIDVNQNKLGGSF-MHMNHSGVHCQSRQEGLEIM 69
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
I +A ++ L + Y +V + + G F+ KGV+ + + I
Sbjct: 70 DIKDAYNKYDGLPE-YWWKMVDPDKDEFTRAAHEHLHGGYFIRARKGVKVQDPVQSCLFI 128
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+ G Q +++ +EG+ + L GC ++ H + E ++ ++ + NW
Sbjct: 129 KDSGLAQNVHNIVVVEEGAELHVLSGCATAHGAKDTAHMGISEFYVKKGGKLTFTMIHNW 188
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G +S L YPS L G S F S+
Sbjct: 189 GDDTAVRPRSG-------GVMEEDCVFLSNYVLLKPVRDLQMYPSITLNGSGSVARFNSV 241
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++ +D+G +++ A +T + I+++ ++ G RG + ++ +C
Sbjct: 242 MVTPPGSYVDAGNRIILNAPDTRAEIIARTLTTGG-TVINRG--FIGGYNVPAKGHLECK 298
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++G H IP +++ L HEA KI+ E + Y + RG+ E+ A + IV GF
Sbjct: 299 GLILG-GGRIHAIPELDATIDGVELSHEAAVGKIAQEEIEYLMARGMDEDEATSTIVRGF 357
Query: 461 VREVLQKLPMEFAVEAQKLID 481
+ + LP E ++ ID
Sbjct: 358 LNVDIMGLPHELEDAIRQQID 378
>gi|169831529|ref|YP_001717511.1| SufBD protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638373|gb|ACA59879.1| SufBD protein [Candidatus Desulforudis audaxviator MP104C]
Length = 394
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 72/393 (18%), Positives = 148/393 (37%), Gaps = 10/393 (2%)
Query: 93 KSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEEL 152
++ + + L + G+ + + GV A A + + +
Sbjct: 9 PDKFKHEAREHAYADFLGAPDLAGLIDAGRLLETGVVLGDEAERAGTFLQADHSLVHAAV 68
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
+ G+ + +A + + K+Y +VP + Y G F+ G +
Sbjct: 69 NQEGLEVLSTDQARQRYDWVDKEYRWKMVPPDADEYTRHAYERSRHGYFIRALAGAKATY 128
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
L I ++G Q +II +EG+ ++ + GC + + ++ +H + E NA++
Sbjct: 129 PLQACLYIAQEGLAQAVHNIIIVEEGAELNIITGCVSSREVKHGMHIGISEFYVKKNAKL 188
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
++ + NW ++ + + A P+ L G
Sbjct: 189 TFTMIHNWAE-------RMHVLPRSAARIEEGGTFLQNYVCLVPVAYLQMNPALYLAGRG 241
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +I + +D G+++ A + ++++ ++ G RG +
Sbjct: 242 ALVRSNTILVGTPGSFMDVGSRVFLQAPEARAEVIARTVTTGGD-VINRG--RLVGEVPG 298
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ +C LL+ H IP +E++ + HEA KI+ E + Y + RG+ E+ A
Sbjct: 299 VKAHLECHGLLLTPRGLIHAIPELEARVEGAEMSHEAAVGKIAPEEIEYLMARGLDEDEA 358
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
A IV GF+ + LP E + I S E
Sbjct: 359 RATIVRGFLNVKMDGLPEELQARIDEAIRQSQE 391
>gi|315504761|ref|YP_004083648.1| fes assembly protein sufd [Micromonospora sp. L5]
gi|315411380|gb|ADU09497.1| FeS assembly protein SufD [Micromonospora sp. L5]
Length = 380
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 60/314 (19%), Positives = 112/314 (35%), Gaps = 17/314 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ +V+ D A L V + + + F T +
Sbjct: 76 DPRVGSVLTPFDRVSA-LAYGGADGALLVRVDRDAVVERPVRLRVVGENAEALAFGHTFV 134
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
D + + + + VE+ D A++ TV +W Q +
Sbjct: 135 EVDRFAEATVVIEHVGSATLADN-----VEVTVGDGAKLTLVTVADWADDAVQAQHL--- 186
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G ++I Q+ G + +Y S E Y + ++ Q ++
Sbjct: 187 -----KVRLGRDARILHVQVSLGGDLVRQYTSVEYTQRGGEAELYGVYFADSGQHLEHRQ 241
Query: 354 KMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H + S + +G ++ + G V + A + + +LL+ + A +
Sbjct: 242 LVDHTVPDCRSNVGYRGALQGDDAHTVWVGDVLIRAEATGTDTYEINRNLLLTDGARADS 301
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY + RGIPE A L+V GF E++ K+P+E
Sbjct: 302 VPNLEIETGEIAGAGHASATGRFDDEQLFYLMARGIPEAEARRLVVRGFFAELINKIPVE 361
Query: 472 FAVE-AQKLIDISL 484
E I+ L
Sbjct: 362 DLRERLGDAIEARL 375
>gi|261749665|ref|YP_003257351.1| cysteine desulfurase activator complex subunit SufD
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
gi|261497758|gb|ACX84208.1| cysteine desulfurase activator complex subunit SufD
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
Length = 432
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/440 (17%), Positives = 160/440 (36%), Gaps = 46/440 (10%)
Query: 57 WRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
R + +L PS W +I + ++ + +
Sbjct: 29 LRHKSIDLFLKKGFPSVTDEEWKNTNVNSILNQEYNLFSQLSQQRKDLEYQKIKELIYLD 88
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L I +D + S+S T+ L +
Sbjct: 89 DSFLII----------------FIDGKYQSISSHTSNNIRLSNL----------ASQEER 122
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFE 229
+K + + + + + LN+ DG ++YIP + + + +
Sbjct: 123 TIKDFYGKLSNLDE-AFNILNTIFSKDGVYIYIPDNLFLKRPIEILHIYTGRESKIMLNP 181
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R LII + S+V +E + + +V E+ A N++I+Y +Q+ +
Sbjct: 182 RNLIIVGKYSFVKIIEHHKCLK-KHLLFNNSVSEIYAFSNSQIEYYKIQDNFDE------ 234
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + + +RSK S+ + G+ + Y I++ +G Q +
Sbjct: 235 --LSIIDNTFVKQDLRSKCSFYTFSFQGKFIRNNLNFSSHGKFTSSYLYGISLLSGEQLV 292
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T M HL N S + K I S + GK+ V + + + F + +++L+ +
Sbjct: 293 DHHTSMEHLYSNAHSFQLYKNILWNKSMGIFNGKILVDKCIKNIKAFQKNNNILLSDEAC 352
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ P +E + H T + LFYC RGI E+ + L++ F+ E+L+ +
Sbjct: 353 IYAKPQLEIFSDEVKCSHGCTVGSFHELDLFYCQSRGISEKESKVLLLLSFLEEILKTMN 412
Query: 470 MEFAVEAQKLIDISLEGSVG 489
+ ++ + L+ ++ +G
Sbjct: 413 I---LKLKNLVYEKMKKKLG 429
>gi|16760535|ref|NP_456152.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29141704|ref|NP_805046.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213428570|ref|ZP_03361320.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213649927|ref|ZP_03379980.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213852801|ref|ZP_03382333.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289825918|ref|ZP_06545077.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25513159|pir||AH0702 conserved hypothetical protein STY1751 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502831|emb|CAD01993.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137332|gb|AAO68895.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 423
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 73/422 (17%), Positives = 139/422 (32%), Gaps = 52/422 (12%)
Query: 56 EWRLL-AYRRWLTM---KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
E R A + + M P+ ++ + L + I ++ + L
Sbjct: 23 EIRTEQARQHFQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA- 78
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L V VD F + + SG E
Sbjct: 79 -------------LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE------- 113
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTG 226
+ PV + L ++ +++ + + R L +E T
Sbjct: 114 ----RQTLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTA 169
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ L EG+ + +E + A + + DNA++++ + +
Sbjct: 170 HYRHHL-TLAEGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AF 220
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
Y+F S S G+A+ + S L GE + S+A+
Sbjct: 221 ENASSYHFAHNDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 279
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ D+ T + H SR + K I + + G ++V + + + ++LL+G
Sbjct: 280 EVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHSIKTDGQMTNNNLLLGK 339
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H AT +I DE +FY RGI ++ A +I+ F E+ +
Sbjct: 340 LAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTE 399
Query: 467 KL 468
+
Sbjct: 400 AI 401
>gi|87118502|ref|ZP_01074401.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
gi|86166136|gb|EAQ67402.1| Cysteine desulfurase activator SufB [Marinomonas sp. MED121]
Length = 420
Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats.
Identities = 73/438 (16%), Positives = 147/438 (33%), Gaps = 43/438 (9%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
DW+ R LA ++ P+ + A + L +
Sbjct: 17 DWLSPKRDLALSALADVRWPT---RKTEAWKYTSLRPVEKFSKTAPASFSKASSLTQIDG 73
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+E L D VF++ VT E G+ S+A
Sbjct: 74 FECL--------------------DLVFENGQFVTDLAELTLPEGLSIQLASQADSAKQA 113
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
V + + + + LN A+ D + + V L ++ R
Sbjct: 114 DVLSKF-SSIKPERHVFGLLNDALVQDVLVIEVADNVSVAPALRLTSILSLAAQA-HTRV 171
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST--VQNWYPGDSQGKG 289
L++ E + ++ E + N VE +A +++ +Q G
Sbjct: 172 LVVLGEHAKLTVSEHYQGNEESLN---TGFVEYEIGADARLEHYRFALQTGKAVSLGGSH 228
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
R+ ++ T + GS ++ + GE + + + + +G +
Sbjct: 229 ----------FQLAERADLNSTLVGFGSDLSRVDVDMVHAGENAFAKMNAFYLLDGKELF 278
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + H + T+ + I+A + + G++ +HR A + +LL+ N
Sbjct: 279 DLHATVEHAVPHGTTEENIRIIAADQAKAVFNGRIHIHRDAQKTLAELNNRNLLMSNKAE 338
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+T P +E H AT ++I + L+Y RGI A ++ GF+ E++ ++P
Sbjct: 339 INTKPELEIYADDVRCAHGATVAEIDKKALYYMQSRGISRAKAQVMLNFGFINELIDQMP 398
Query: 470 MEFAVEAQKLIDISLEGS 487
E + + +
Sbjct: 399 ---NQELAEWLRPQMREK 413
>gi|312172293|emb|CBX80550.1| FeS assembly protein SufD [Erwinia amylovora ATCC BAA-2158]
Length = 426
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 59/299 (19%), Positives = 104/299 (34%), Gaps = 13/299 (4%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ----FERTLIIADE 237
PV + L ++ +F+ + +G L + G+ R + DE
Sbjct: 123 PVHPEVFLHLTESLAEQVTFMQLARGKAAARPLYLLHISSGSTAGELNTSHYRHHLQLDE 182
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ + +E A +NA + + +
Sbjct: 183 AAEATVIEHYL-SLDAAPHFTGARFTAEVGNNAALTHYNLAFEDRSSYHLSHNDLTL--- 238
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G +++ G+ +T + S L GE S S+ + + DS T + H
Sbjct: 239 -----GRDTRVQSHSFLLGAGLTRHHTSTRLDGEGSFLAINSLMLPMDKEVCDSRTWLEH 293
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
SR + K I + + G + V + A + ++LL+G T P +E
Sbjct: 294 NKGYCQSRQLHKTIVRDRARAVFNGIIKVAKHALKTDGQMNNNNLLLGRLAEVDTKPQLE 353
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT +I +E +FY RGI E AA +I+ F E+ + + E EA
Sbjct: 354 IYADDVKCGHGATIGRIDEEQMFYLRSRGIDEAAAQRMIIYAFAAELTEAITDETLKEA 412
>gi|213965646|ref|ZP_03393840.1| FeS assembly protein SufD [Corynebacterium amycolatum SK46]
gi|213951805|gb|EEB63193.1| FeS assembly protein SufD [Corynebacterium amycolatum SK46]
Length = 396
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 63/308 (20%), Positives = 105/308 (34%), Gaps = 22/308 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F D V K + + + +I + E
Sbjct: 97 DRVAAQAYSNFDDAHVVTFAKNSVSKEPVVIDIDGPGEDNVSYGHIVIDVQSHA-----E 151
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ A +E D A++ T+ NW G G
Sbjct: 152 AVCVINYRGSGTFADNIEFAIGDGAKLSVVTMVNWNEDAVHGS--------AHHIRVGRD 203
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + T G + P + + ++ Q ++ + H N S
Sbjct: 204 ATLRHTVATFGGEVVRIVPRVAFTAPGGDVDLLGVYFADAGQYFENRMLVDHAVPNCRSN 263
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G + + G V + A + + +LL+ A +P +E
Sbjct: 264 VMYKGALQGEPNVAHREARTAWVGDVLIRAEATGTDTYELNRNLLLTEGARADAVPNLEI 323
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H AT + +E LFY L RGIPE AA L+V GF EV+ +P+E E
Sbjct: 324 ETGEIAGAGHAATVGRFDEEQLFYLLSRGIPELAARRLVVRGFFSEVINLIPVESVREKL 383
Query: 477 QKLIDISL 484
+KL+D L
Sbjct: 384 EKLVDEEL 391
>gi|312621363|ref|YP_004022976.1| sufbd protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312201830|gb|ADQ45157.1| SufBD protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 416
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 80/397 (20%), Positives = 160/397 (40%), Gaps = 19/397 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + + L + E+ +T GI + E+ + D V
Sbjct: 30 DLSQFEEAEEKEQISELSKLPEEIQKTILNAGIEVSEE--------GRSGSFLQLDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + + I+EA+ ++P++ +KYL V + Y A ++ G F+ +
Sbjct: 82 YRRLQQRY-HGQIEILDINEALEKYPEVREKYLWKAVKPDKDKYTAFSAMHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GC + + LH + E
Sbjct: 141 FKGQKVEKPIQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+++ ++ V NW G+ +S L +P
Sbjct: 201 YLEKGSKLTFTMVHNWAEDFYVRPRGVT-------VVEDDAVFVSNYVLLKPVKSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ + F S+ +ID G+ ++ +N++ + +S+ I + RG +
Sbjct: 254 VAVLKGKNAVASFNSLLYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGIL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
S+ C +L+ +N + +P + S +L HEA I++E + Y +
Sbjct: 314 EARHNV--SKAHLDCRGILLSDNGLMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
RG+ ++ AI+LI GF+ + LP + Q+LI
Sbjct: 372 SRGLSKDEAISLITQGFMDVKILGLPKQLENYVQELI 408
>gi|313617387|gb|EFR89791.1| FeS assembly protein SufD [Listeria innocua FSL S4-378]
Length = 209
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A I + V N G + +V +RG G S+I W T L
Sbjct: 1 ARITFGGVDNLASG-------VTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLM 52
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ S + ++ + G Q + T++ H K + I+S G+ + + G + G
Sbjct: 53 GDGSSADVKTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHG 112
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A+ S + L++ P + + H A+ ++ LFY + RGI +
Sbjct: 113 ASKSDAQQESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQ 172
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ A L+++GF+ V+++LP+E + ++ +EG V
Sbjct: 173 KEAERLVIHGFLDPVVRQLPIES---VKTMLREVIEGKV 208
>gi|294341073|emb|CAZ89470.1| putative Protein sufD [Thiomonas sp. 3As]
Length = 439
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 87/426 (20%), Positives = 142/426 (33%), Gaps = 41/426 (9%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDV 104
EP W + R A L P+ W A+D DL AP +++ ++L D
Sbjct: 21 EPAWCAQARHQAREDLLRSGLPTRHTEDWKYTSLRALDAIDLAT-TAPTALLDGEALRDA 79
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
+L G V VD FD+ + GV P
Sbjct: 80 -----------------GALLVGDGPRLVFVDGAFDAELSHLS----DLPPGVSLAPWGA 118
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
+ + L G + A+N DG + + GV + G
Sbjct: 119 GLSHNATASGAVLDAAARGG--AFEAINRLFARDGMALELADGVCLAAPVVVIALQTRAG 176
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
L +GS+ +E + L +V A + + +Q+
Sbjct: 177 ASHLRHVL-RLGQGSWARVIEQHIGLAQMVPYLSTSVTRAELARGATLAHVRLQDESGAA 235
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
V++ +G S++ L G+ ++ + + ++
Sbjct: 236 VH--------VSQLHVAQGRDSRLDARLLVVGARLSRQEFHIAHEAPGCHTDLRGASVLA 287
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G Q D + H +TSR +G+ S+ + G+V+VH GA + +LL+
Sbjct: 288 GEQHGDVHMCIEHRHPRSTSRTDVRGVFDDASHGVFTGRVNVHPGAQKTDAGMINRNLLL 347
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
A T P ++ H AT ++ E LFY RGI A AL+V F V
Sbjct: 348 SPRAEADTRPQLQIDADDVLCSHGATVGQLDAEALFYLQSRGIAAPLARALLVQAF---V 404
Query: 465 LQKLPM 470
Q LP
Sbjct: 405 AQALPD 410
>gi|213612669|ref|ZP_03370495.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 421
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 73/422 (17%), Positives = 139/422 (32%), Gaps = 52/422 (12%)
Query: 56 EWRLL-AYRRWLTM---KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
E R A + + M P+ ++ + L + I ++ + L
Sbjct: 21 EIRTEQARQHFQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA- 76
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L V VD F + + SG E
Sbjct: 77 -------------LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE------- 111
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTG 226
+ PV + L ++ +++ + + R L +E T
Sbjct: 112 ----RQTLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTA 167
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ L EG+ + +E + A + + DNA++++ + +
Sbjct: 168 HYRHHL-TLAEGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AF 218
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
Y+F S S G+A+ + S L GE + S+A+
Sbjct: 219 ENASSYHFAHNDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKN 277
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ D+ T + H SR + K I + + G ++V + + + ++LL+G
Sbjct: 278 EVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHSIKTDGQMTNNNLLLGK 337
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
T P +E H AT +I DE +FY RGI ++ A +I+ F E+ +
Sbjct: 338 LAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTE 397
Query: 467 KL 468
+
Sbjct: 398 AI 399
>gi|323495958|ref|ZP_08101024.1| dufD protein [Vibrio sinaloensis DSM 21326]
gi|323318993|gb|EGA71938.1| dufD protein [Vibrio sinaloensis DSM 21326]
Length = 423
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 69/416 (16%), Positives = 137/416 (32%), Gaps = 41/416 (9%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYY-YAAPKSIVGPQSLDDVDPELLRTYE 113
+W+ + + ++ PS + + L Y Y+ P QS +++ E L
Sbjct: 23 QDWQKNQFAKAKSVGLPS---AKEEGWKYTSLEYFYSLPLQSAALQSAENISYEGLS--- 76
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
LGI G +++ + K V + + A+ E +L
Sbjct: 77 -LGIDAYRLVFFDGHFSARCSDWIP---------------KVRVTPLNVLTAV-ETYELS 119
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-TGQFERTL 232
+ V + + L A + G + + + + + + R
Sbjct: 120 R-------SVRADAFTYLTDATASGGVLIEVEPNTQVTKPIYLLHISSGQNGEVCSYRHH 172
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I S + +E + ++ + + + A +++ +
Sbjct: 173 IEMAPLSELEVIEHHISLEQGGGVTLSRLTS-YIGEGANYQHTKLIEESKQQHHFGHN-- 229
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+K T + + S L G+ S+A+ Q DS
Sbjct: 230 ------DIRLQRDAKAKSTAVLLSGLLVRHQTSSELSGDNGELAMNSVAMPKDEQTFDSR 283
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H A + S + K I N + G + V A + SLL+ ++ +
Sbjct: 284 TYLKHNAPHCRSEQMHKIIGRDKGNAVFDGMIYVDPVALKTDGQMDTHSLLLSDHAQVNC 343
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H ATT ++ + Y RGI +E A ++++ FV EV K+
Sbjct: 344 KPQLEIYADDVKCSHGATTGQMDKNQIDYMRARGINQEQAEQMLMSAFVCEVADKI 399
>gi|322655808|gb|EFY52110.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
Length = 439
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 136/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEAKVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|197263874|ref|ZP_03163948.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197242129|gb|EDY24749.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 423
Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats.
Identities = 70/412 (16%), Positives = 136/412 (33%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
V + L ++ +++ + + R L +E T + L
Sbjct: 120 SVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|222530565|ref|YP_002574447.1| SufBD protein [Caldicellulosiruptor bescii DSM 6725]
gi|222457412|gb|ACM61674.1| SufBD protein [Caldicellulosiruptor bescii DSM 6725]
Length = 416
Score = 199 bits (507), Expect = 7e-49, Method: Composition-based stats.
Identities = 81/397 (20%), Positives = 159/397 (40%), Gaps = 19/397 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + + L + E+ +T GI + E+ + D V
Sbjct: 30 DLSQFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEE--------GRSGSFLQLDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + + I+EA+ ++P++ +KY V + Y A ++ G F+ +
Sbjct: 82 YRRLQQRY-HGQLEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GC + + LH + E
Sbjct: 141 FKGQKVEKPIQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ + ++ V NW G+ +S L +P
Sbjct: 201 YLEKGSRLTFTMVHNWAEDFYVRPRGVT-------IVEDDAVFVSNYVLLKPVKSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ S F S+ +ID G+ ++ +N++ + +S+ I + RG +
Sbjct: 254 IAILKGKNSVASFNSLLYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDRAKIYSRGIL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
+ HS+ C +L+ +N + +P + S +L HEA I++E + Y +
Sbjct: 314 EARQN--HSKAHLDCRGILLSSNGMMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
RG+ ++ AI+LI GF+ + LP Q+LI
Sbjct: 372 SRGLSKDEAISLITQGFMDVKILGLPKHLENYIQELI 408
>gi|145349023|ref|XP_001418940.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
gi|144579170|gb|ABO97233.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 199 bits (507), Expect = 7e-49, Method: Composition-based stats.
Identities = 69/318 (21%), Positives = 118/318 (37%), Gaps = 15/318 (4%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG----QFE 229
N +AA+NSA D V +PKGV+C + G
Sbjct: 74 DATTGKQSATRGNVFAAINSASAADVVVVRVPKGVKCASPVHIVTMSTGGENGATRVSAP 133
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R I+ +E + +E E V E+ A +K++ +QN G + +
Sbjct: 134 RITIVVEEEGELCVVEDFAGEGETEYWQ-NGVCEIAVEKGASMKHALIQNHGRGATHTR- 191
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
VT+ SK ++ G + G ++ ++ Q +
Sbjct: 192 --TTLVTQ-----AEDSKYEVNEISVGGKTARHDLNIKQLGPRTETVLGCFNLAGSNQTL 244
Query: 350 DSGTKMLHLAKNTTSRIVSKGIS-AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D +K+ + +S V K I A + G V V+R A + +LL+
Sbjct: 245 DLHSKLQLDHEEGSSNQVHKCIVSAASGKGVFDGNVQVNRMAQRTDAQQLSRNLLLVPKA 304
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ P ++ H T S + +E LFY RG+ E A +L+V+GF +V+ +L
Sbjct: 305 TVNVKPNLQIIADDVKCTHGCTVSDLEEEELFYIRSRGLSAETARSLLVSGFGVDVISRL 364
Query: 469 P-MEFAVEAQKLIDISLE 485
P + ++ SLE
Sbjct: 365 PGKDLRDRVNSIVRTSLE 382
>gi|205352908|ref|YP_002226709.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857122|ref|YP_002243773.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|205272689|emb|CAR37603.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708925|emb|CAR33255.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326627981|gb|EGE34324.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 423
Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 135/412 (32%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V VD F + + SG E +
Sbjct: 79 ---LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++ + + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLHHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQSHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|307946850|ref|ZP_07662185.1| FeS assembly protein SufD [Roseibium sp. TrichSKD4]
gi|307770514|gb|EFO29740.1| FeS assembly protein SufD [Roseibium sp. TrichSKD4]
Length = 440
Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats.
Identities = 81/419 (19%), Positives = 137/419 (32%), Gaps = 28/419 (6%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + P Y D AAP + ++ + T+ L
Sbjct: 36 LRSAALEQIKAKGLPHRRVEEYKYSDLRAFLKSAAPLAATAERAATEAALAAADTFGDL- 94
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E+ L S VA + L+ GV EA+
Sbjct: 95 ----ERYKLVIANGSLVADLSDI----------SALEADGVSVTDFVEALGSGNGSALLA 140
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
P ++ ALN+A G + + G + + +G Q R +
Sbjct: 141 NPMTAP--NDGLLALNTAFVQGGVVLSVKAGSQVSKPVEIVHVAASEG-AQTTRCRVEVG 197
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + LE T + AV + DNA + + + + I +
Sbjct: 198 EGANLRLLE--TFVGETGSGEINAVFDYQVADNATLATTRLMIGEASAPRLFTSIAH--- 252
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + G T +GE S + Y + ++ G D +
Sbjct: 253 -----IGAEALFKSLGFIAGPEFTRNQQFVHFQGENSEAKVYGVGMARGKGLADQTLIVD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + SR K + + Y+G+++V + A + +LL+ P +
Sbjct: 308 HAVTHCNSREFFKTVLDDQARGVYQGRINVAQHAQKTDGEMMTQALLLSEEAEMANKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
E H AT+ +I ++ LFY RGIPE A L+V F+ E +++ E E
Sbjct: 368 EIFADDVLCAHGATSGQIDEDLLFYLRARGIPEAEARTLLVLAFLSEAIEEYDEEDVTE 426
>gi|302766733|ref|XP_002966787.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
gi|300166207|gb|EFJ32814.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
Length = 469
Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats.
Identities = 73/428 (17%), Positives = 143/428 (33%), Gaps = 37/428 (8%)
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
W + A F ++ + I +D L ++E + E L V
Sbjct: 64 KWPSSKDEAYRFTNVK-FLKDSEIQPLILGEDEVESL--SFEGMEDEEDESIRLVFVDGI 120
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
+ + V G I E + ++ ST++
Sbjct: 121 LSPELSKVEGVPPEVYV-------GSILGAPDEKLQKYVVPRIAQASTLIDKDAFVSLNG 173
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-----------TGQFERTLIIADEGSY 240
A+ D V +PK ++ + + + + R L++A EG+
Sbjct: 174 IGAL--DLGVVLVPKDLKLEKPIHVVYYSTPRKNLKNQLEPQVVSMTNPRLLVVASEGAT 231
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V +E + + +V E+V A + + +Q K K
Sbjct: 232 VHLVEEFRGGTEESSHWTNSVCEIVIESGASVSHDLIQTQERSSVSMK--------KTYV 283
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ S +E GS ++ G + + + + Q D ++++
Sbjct: 284 SQEKASSYKCVDVELGSKLSRHNLHIEQLGSDTKTDMLTFLLCGRDQVQDLHSRLILNHP 343
Query: 361 NTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+R + K I + + + G + V+R A + SLL+ + P ++
Sbjct: 344 RGYARQLQKCIVMNSTGHGVFDGNIRVNRDAQQTDAGQLSRSLLLAPRATVNAKPSLQIN 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL---PMEFAVEA 476
H S + ++ LFY RGI + A + +V F EV++KL M+ +VE
Sbjct: 404 ADDVKCTHGVAISDLDEDQLFYFRARGIDAQTARSALVFSFGAEVIEKLESKTMQKSVE- 462
Query: 477 QKLIDISL 484
+L+ L
Sbjct: 463 -ELLKSLL 469
>gi|320539151|ref|ZP_08038822.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
gi|320030789|gb|EFW12797.1| putative truncated component of SufBCD complex [Serratia symbiotica
str. Tucson]
Length = 400
Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats.
Identities = 57/300 (19%), Positives = 102/300 (34%), Gaps = 16/300 (5%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK------GTGQFERTLIIA 235
P+ + L ++ + S +++P G L + T L IA
Sbjct: 58 PIQPEIFLHLTESLAQETSIIHLPAGKAATRPLYLLHISSGNGTEGEVNTVHHRHHLAIA 117
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G+ +E + A + DNAE+ + +
Sbjct: 118 H-GAQAEVIEHYVSLGD-AAHFTGARLTANVADNAELLHCKLAFESYPSYHFSHN----- 170
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G +++ G+ +T S L G + S+ + G + D+ T +
Sbjct: 171 ---DLVIGRDARVKSDSFLLGAGLTRHNTSAQLNGPGANLAINSLVLPIGKEVCDTRTYL 227
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H SR + K + + + + G ++V + A + +LL+G T P
Sbjct: 228 DHNQGYCESRQMHKTVVSDGAKAVFNGMINVAKHAIKTDGQMTNHNLLLGKAAEVDTKPQ 287
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT +I LFY RGI + AA +I+ F E+ + E E
Sbjct: 288 LEIYADDVKCSHGATVGRIDVAQLFYMQSRGIDKHAAQQMIIFAFAAELTANIANETLRE 347
>gi|296117933|ref|ZP_06836516.1| FeS assembly protein SufD [Corynebacterium ammoniagenes DSM 20306]
gi|295969164|gb|EFG82406.1| FeS assembly protein SufD [Corynebacterium ammoniagenes DSM 20306]
Length = 394
Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats.
Identities = 55/309 (17%), Positives = 106/309 (34%), Gaps = 20/309 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D A +++ I R + + F T + ++
Sbjct: 96 PSDRVAAQAWTSMPEATLIT-IDPETRSDEPVHVTISGAGEDNVSFGATTFDVGHHAEIT 154
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+ + + + HA + + D A + +W +
Sbjct: 155 LV-----VKYEGSGTHADNLGFIIGDGAHVTVIVDADWNNDTVHLSN--------QSILM 201
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G S + G + +P E + ++ Q ++ + H N
Sbjct: 202 GRDSVLRHNSAIFGGEVVRLFPRVKYSAPGGDAELLGVYFADAGQYFENRMLVDHSVPNC 261
Query: 363 TSRIVSKGISAGFSNNTYR----GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
S ++ KG G N R G V + A + + ++L++ + A +IP +E
Sbjct: 262 RSNVLYKGALQGTKENEARTCWVGDVLIRSNAPGTDTYETNNNLILSDGARADSIPNLEI 321
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEA 476
+ H AT + D LFY + RGIP + A LI+ GF EV+ ++P+ + E
Sbjct: 322 ETGEIAGAGHAATVGRFDDLELFYLMSRGIPADEARRLIIRGFFNEVIHRIPVKSLSEEL 381
Query: 477 QKLIDISLE 485
++ + LE
Sbjct: 382 ERRVSDELE 390
>gi|329940797|ref|ZP_08290077.1| Iron-sulfur assembly protein SufD [Streptomyces griseoaurantiacus
M045]
gi|329300091|gb|EGG43989.1| Iron-sulfur assembly protein SufD [Streptomyces griseoaurantiacus
M045]
Length = 393
Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats.
Identities = 63/306 (20%), Positives = 117/306 (38%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V +PK + ++ +G + T+ + + +
Sbjct: 102 DRVAAQAYSAFEKATIVTVPKETVLTEPVRL--ALHGEGGVTYGHTVFELGAFAEATVV- 158
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA VE V D A++ TV +W ++G G
Sbjct: 159 ----IDHTGDTVRAANVEYVVGDGAKLTVVTVMDWDRTAVHTS--------QQGALVGRD 206
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P G E + ++ Q + + H + S
Sbjct: 207 AGFRHIVVTFGGDLVRIHPRVTYAGTGGEAELIGLYFTDKGQHHEHRLLVDHNTPHCKSN 266
Query: 366 IVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
+V KG G S + + G V + A + + +L++ + ++P +E +
Sbjct: 267 VVYKGALQGESAHAVWIGDVLIEAKAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 326
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY + RGIPE A L+V GF E++Q++ + E I+
Sbjct: 327 GAGHASATGRFDDEQLFYLMARGIPETDARRLVVRGFFAELVQQIGVPDIEERLLAKIEE 386
Query: 483 SLEGSV 488
LE SV
Sbjct: 387 ELEASV 392
>gi|312126470|ref|YP_003991344.1| sufbd protein [Caldicellulosiruptor hydrothermalis 108]
gi|311776489|gb|ADQ05975.1| SufBD protein [Caldicellulosiruptor hydrothermalis 108]
Length = 416
Score = 199 bits (506), Expect = 9e-49, Method: Composition-based stats.
Identities = 80/397 (20%), Positives = 159/397 (40%), Gaps = 19/397 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + + L + E+ +T GI + E+ D V
Sbjct: 30 DLSQFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEESR--------SGSFLQLDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + + + I+EA+ ++P++ +KY V + Y A ++ G F+ +
Sbjct: 82 YRRLQQRYQGQ-LEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GC + + LH + E
Sbjct: 141 FKGQKVEKPIQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ + ++ V NW G+ +S L +P
Sbjct: 201 YLEKGSRLTFTMVHNWAEDFYVRPRGVT-------VVEDDAVFVSNYVLLKPVKSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ S F S+ +ID G+ ++ +N++ + +S+ I + RG +
Sbjct: 254 IAVLKGKNSVASFNSLLYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGIL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
+ S+ C +L+ +N + +P + S +L HEA I++E + Y +
Sbjct: 314 EARQN--RSKAHLDCRGILLSSNGMMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
RG+ ++ AI+LI GF+ + LP + Q+LI
Sbjct: 372 SRGLSKDEAISLITQGFMDVKILGLPKQLENYIQELI 408
>gi|218532235|ref|YP_002423051.1| FeS assembly protein SufD [Methylobacterium chloromethanicum CM4]
gi|218524538|gb|ACK85123.1| FeS assembly protein SufD [Methylobacterium chloromethanicum CM4]
Length = 440
Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats.
Identities = 87/418 (20%), Positives = 145/418 (34%), Gaps = 27/418 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + PS R A + DL AA P D G
Sbjct: 34 REEAFRFFEATGLPS---RRVEAFKYTDLR--AAITEAAPPAEAPSEDAARAAVAGTTGF 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L V VA + D V GV P++EA+ + +K L
Sbjct: 89 NAVEAVRLTFVNGHLVASLSDLDRVP-----------EGVTVTPLNEAMGKGDARLK-LL 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-GQFERTLIIAD 236
+ V V +N LN+A DG+ + + G + + F + R L+
Sbjct: 137 APVEQVRENPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGEAAFSTATRVLVDVG 196
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ LE P Q + A+ ++ A +++ +
Sbjct: 197 AEAEFFLLESHEGPAGLTYQPNDAL-DVHIGAEAAFRHTRLNREGDAAVALS-------- 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
R+++ L TG+ ++ + GE + + Q DS
Sbjct: 248 TLSVRLDARAELETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLLAD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A R + K + G S ++GK+ V + A + + D LL+ ++ P +
Sbjct: 308 HAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
E H AT ++ LFY + RG+P A +L+V FV E ++ + E A
Sbjct: 368 EIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
>gi|312198652|ref|YP_004018713.1| FeS assembly protein SufD [Frankia sp. EuI1c]
gi|311229988|gb|ADP82843.1| FeS assembly protein SufD [Frankia sp. EuI1c]
Length = 386
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 69/344 (20%), Positives = 126/344 (36%), Gaps = 20/344 (5%)
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGV 208
+E K V E+ + V+ D AA + V +P
Sbjct: 59 QEPDGKVDVTVSAPDGVEVENVGTDDPRVGRVLTPVD-RVAAFATVRAGGALVVTVPAEA 117
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
R+ G + + + + + T R A VE+
Sbjct: 118 ELDEP--VLLRLRGDGGVSYGHLAVEVGPFARATVVLDHTGTARY-----AGNVEVYVGH 170
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
A + + ++Q+W ++ G +++ T + G + P+
Sbjct: 171 GANVTFVSLQDWDDDAVHAGAHAFSL--------GRDARLRATHITLGGQLVRLCPTVDY 222
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVH 387
RG E + ++ Q + + H +N SR+ KG G +++ + G V +
Sbjct: 223 RGPGGDAELSGLFFTDAGQHQEHRLLVTHQERNCRSRVTYKGALQGADAHSVWIGDVLIG 282
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRG 446
GA + + +L++ + A ++P +E H + T + DE LFY + RG
Sbjct: 283 AGAVGTDTYEINRNLVLTDGARADSVPNLEILTGEVTGAGHASATGRFDDEALFYLMARG 342
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLEGSVG 489
IP + A L+V GF EVL ++ +E E ++D L G VG
Sbjct: 343 IPADEARRLVVRGFFGEVLDRIGVEALRERVTAVVDAELAG-VG 385
>gi|254563304|ref|YP_003070399.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
gi|254270582|emb|CAX26585.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
Length = 440
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 87/418 (20%), Positives = 145/418 (34%), Gaps = 27/418 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + PS R A + DL AA P D G
Sbjct: 34 REEAFRFFEATGLPS---RRVEAFKYTDLR--AAITEAAPPAEAPSEDAARAAVAGTTGF 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L V VA + D V GV P++EA+ + +K L
Sbjct: 89 NEVEAVRLTFVNGHLVASLSDLDRVP-----------EGVTVTPLNEAMGKGDARLK-LL 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-GQFERTLIIAD 236
+ V V +N LN+A DG+ + + G + + F + R L+
Sbjct: 137 APVEQVRENPIYQLNTAFLADGALISVAPGAKPATPIHLRFVGTGEAAFSTATRVLVDVG 196
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ LE P Q + A+ ++ A +++ +
Sbjct: 197 AEAEFFLLESHEGPAGLTYQPNDAL-DVHIGAEAAFRHTRLNREGDAAVALS-------- 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
R+++ L TG+ ++ + GE + + Q DS
Sbjct: 248 TLSVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHSQLADSTLLAD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A R + K + G S ++GK+ V + A + + D LL+ ++ P +
Sbjct: 308 HAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
E H AT ++ LFY + RG+P A +L+V FV E ++ + E A
Sbjct: 368 EIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGAR 425
>gi|83644265|ref|YP_432700.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
gi|83632308|gb|ABC28275.1| FeS assembly protein SufD [Hahella chejuensis KCTC 2396]
Length = 439
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/423 (17%), Positives = 147/423 (34%), Gaps = 38/423 (8%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ + R + ++ P+ + A + +
Sbjct: 32 WLDDVRSEGRSLFAGLELPT---RKTEAWRYTPIAPIVQ--------------------G 68
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ L + E T + ++ S + +P S A L
Sbjct: 69 DILRLRTTESADAPQGITGDFYTLTFHNGQL----TASDIDDSALEAIPFSSADAAGQAL 124
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG--TGQFER 230
+K+YL + +AALN+ DG+ + + K + L + G + R
Sbjct: 125 IKEYLGKTFDAARHPFAALNAGTLQDGALIRVKKDSKALKPLQIVHTADVSGDPASSYNR 184
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+++ + GS + LE + + V E+ N+ + + +
Sbjct: 185 VIVVVEAGSKLELLETYVDTKERKVFQ-NTVTEVFLAANSTMTHYALNCEGANQIHTGC- 242
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ S+ TG A+ + + L G+ + + + ++ G + +D
Sbjct: 243 -------VFVEQQGGSQYEQHAFATGGALKRRDINVKLLGQLASCKLNGVYLAGGREHVD 295
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + H+A + S KGI G + G+V +HR A S ++LL+ N
Sbjct: 296 FHTTIEHVAPHCVSEETYKGIINGKGKAVFNGRVHIHRDAQQSSAAMNNNNLLLTNTAEV 355
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+T P +E H AT ++ D LFY RGI A ++ FV V+ ++ +
Sbjct: 356 NTKPELEIYADDVKCAHGATVGQLDDMALFYFRSRGITRSDAHRMLSRAFVESVMAEMEI 415
Query: 471 EFA 473
E A
Sbjct: 416 ETA 418
>gi|260903760|ref|ZP_05912082.1| FeS assembly protein SufD [Brevibacterium linens BL2]
Length = 391
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 102/276 (36%), Gaps = 16/276 (5%)
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
++ + + + R H+ +V LV D A++ +
Sbjct: 128 IIHADGTGDDISHGHVVVSVGANAKATVVIEHEGLAR-----HSELVSLVVGDGADVTFV 182
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++Q W + G +K+ + G I +
Sbjct: 183 SLQLWDDASQHLG--------QHDAIVGKDAKLKHIAISLGGDIVRLNTNVRYSAAGGEA 234
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSR 394
E + ++ Q + T + H TS + KG G + + G V + A
Sbjct: 235 ELLGLYFADAGQHFEHRTYIDHNTPKATSNVHYKGALQGKDARSVWIGDVLIRPEALDID 294
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ +L++ + A ++P +E + H ++T + +EHLFY + RGIPEE A
Sbjct: 295 TYELNRNLILSDGARADSVPNLEIETGDIAGAGHASSTGRFDEEHLFYLMSRGIPEEVAR 354
Query: 454 ALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSV 488
L+V GF EV+QK+ + E + I+ L SV
Sbjct: 355 QLVVRGFFNEVIQKIQVPEIEEVLNERIEEELSRSV 390
>gi|18398463|ref|NP_564404.1| ATNAP6 (NON-INTRINSIC ABC PROTEIN 6); protein binding / transporter
[Arabidopsis thaliana]
gi|75180162|sp|Q9LQK7|AB7I_ARATH RecName: Full=Protein ABCI7, chloroplastic; AltName: Full=ABC
transporter I family member 7; Short=ABC transporter
ABCI.7; Short=AtABCI7; AltName: Full=Non-intrinsic ABC
protein 6; AltName: Full=Plastid SufD-like protein;
Flags: Precursor
gi|8920626|gb|AAF81348.1|AC007767_28 Contains an uncharacterized protein family (UPF0051) domain
PF|01458 [Arabidopsis thaliana]
gi|115646721|gb|ABJ17094.1| At1g32500 [Arabidopsis thaliana]
gi|332193373|gb|AEE31494.1| protein ABCI7 [Arabidopsis thaliana]
Length = 475
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/386 (19%), Positives = 135/386 (34%), Gaps = 18/386 (4%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
P P D E + R EIL + ++ + D T
Sbjct: 84 PSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFTNAVIIDGFVSNLTIGPS 143
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
GV F S E + + +++ + A D +Y+P+G +
Sbjct: 144 DLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA--PDLMVIYVPEGCKVE 201
Query: 212 MELSTYFRINEKGT-------GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
+ + E G R ++ +EG + +E + V+E+
Sbjct: 202 NPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVGKDEEGFYWTNPVLEV 261
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V NA++K+S +Q + K + FV + S+ ++ TG +
Sbjct: 262 VVQKNAKLKHSYLQKESMASAHIK---WTFVRQ-----EAESEYELVEVSTGGKLGRHNV 313
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGK 383
G + E + + Q +D +K++ SR + K I A S + G
Sbjct: 314 HVQQLGPDTLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSGQAVFDGN 373
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V V+R A + SLL+ + P ++ H A S + ++ LFY
Sbjct: 374 VRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQLFYFQ 433
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLP 469
RGI E A +++ F EV++K P
Sbjct: 434 ARGIDLETARRALISSFGSEVIEKFP 459
>gi|198244393|ref|YP_002215755.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|197938909|gb|ACH76242.1| FeS assembly protein SufD [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
Length = 423
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 70/412 (16%), Positives = 135/412 (32%), Gaps = 48/412 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ L + P+ ++ + L + I ++ + L
Sbjct: 33 LQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISSAQRDALA----------- 78
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L + VD F + + SG E +
Sbjct: 79 ---LQIDAVRLLFVDGRFMPE-----LSDSTQNSGFDVSVRDE-----------RQTLAA 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 120 PVQPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDGDELNTAHYRHHL-ALA 178
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++ + + + Y+F
Sbjct: 179 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLHHIKL-------AFENASSYHFAH 230
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 231 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR K I + + G ++V + A + ++LL+G T P +
Sbjct: 290 HNKGYCNSRQSHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGKLAEVDTKPQL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 350 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 401
>gi|56459263|ref|YP_154544.1| cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
gi|56178273|gb|AAV80995.1| Cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
Length = 416
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 81/435 (18%), Positives = 160/435 (36%), Gaps = 42/435 (9%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
DW+ R A + P+ R A + L+ A D EL +
Sbjct: 17 DWLSPVRAQALDTLKQQQWPT---RRTEAWRYTSLHPVA--------------DLELKSS 59
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
G E ++ G+ + +D VF + T + G+ + A E +
Sbjct: 60 ---TGNATAEAPVIEGLNS----LDLVFVDGQLSTDISKLKLPEGITISEL-SAPSEPAE 111
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+ V + + +N + G + I G + + G +RT
Sbjct: 112 AIFAQ----VKPSRHLFGLVNDVLAQQGVVIDIAAGAKVEQPIRIVNFA-SAGIESHQRT 166
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+ E + + +E + N + A E + A +++ G
Sbjct: 167 LVRVGENAQATIIEHGSGSGNSLNTVFA---EYDIAEKARLEHYRFALHEGEAIHIGGSH 223
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+ ++++ T + GS +T GE + +F ++ + Q D
Sbjct: 224 FKLH--------DHARLNSTLIGYGSQLTRLDVDIEHAGEHAFAKFNNVYLLAPRQHFDL 275
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + H + N T+ ++GI + + G++ +HR A + +LL+ +
Sbjct: 276 HSTIEHASPNGTTEENARGIIGDRAKAVFNGRIHIHRHAQKTLAELNNRNLLLTRGAQIN 335
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
T P +E H AT ++I +E L+Y L RGI + A+ ++ GFV+E++ ++P +
Sbjct: 336 TKPELEIYADDVQCAHGATVAEIDEEALYYMLTRGIDRQQALVMLNFGFVQEMVFQMPNK 395
Query: 472 -FAVEAQKLIDISLE 485
A Q ++ E
Sbjct: 396 ALADWLQPILKTRFE 410
>gi|302761748|ref|XP_002964296.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
gi|300168025|gb|EFJ34629.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
Length = 469
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 74/428 (17%), Positives = 142/428 (33%), Gaps = 37/428 (8%)
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
W + A F ++ + I D L ++E + E L V
Sbjct: 64 KWPSSKDEAYRFTNVK-FLKDSEIQPLIIGGDEVESL--SFEGMEDEEGESIRLVFVDGI 120
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
+ + V G I E + ++ ST++
Sbjct: 121 LSPELSKVEGVPPEVYV-------GSILAAPDEKLQKYVVPRISQASTLIDKDAFVSLNG 173
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-----------TGQFERTLIIADEGSY 240
A+ D V +PK ++ + + + + R L++A EG+
Sbjct: 174 IGAL--DLGVVLVPKDLKLEKPIHVVYYSTPRKNLKNQLEPQVVSMTNPRLLVVASEGAT 231
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V +E + + +V E+V A + + +Q K K
Sbjct: 232 VHLVEEFRGGTEESSHWTNSVCEIVIESGASVSHDLIQTQGRSSVSMK--------KTYV 283
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ S +E GS ++ G + E + + Q D ++++
Sbjct: 284 SQEKASSYKCVDVELGSKLSRHNLHIEQLGSDTKTEMLTFLLCGRDQVQDLHSRLILNHP 343
Query: 361 NTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+R + K I + + + G + V+R A + SLL+ + P ++
Sbjct: 344 RGYARQLQKCIVMNSTGHGVFDGNIRVNRDAQQTDAGQLSRSLLLAPRATVNAKPSLQIN 403
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL---PMEFAVEA 476
H S + ++ LFY RGI + A + +V F EV++KL M+ +VE
Sbjct: 404 ADDVKCTHGVAISDLDEDQLFYFRARGIDAQTARSALVFSFGAEVIEKLESKTMQKSVE- 462
Query: 477 QKLIDISL 484
+L+ L
Sbjct: 463 -ELLKSLL 469
>gi|270308123|ref|YP_003330181.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Dehalococcoides sp. VS]
gi|270154015|gb|ACZ61853.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Dehalococcoides sp. VS]
Length = 411
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 84/362 (23%), Positives = 154/362 (42%), Gaps = 15/362 (4%)
Query: 121 EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
E ++ + D+ V + +++ G+ M SEA ++ D +K Y
Sbjct: 59 ESGVVLDDLKERSGTYIQMDNRPVHFSAQQD----GIEIMSTSEAALKY-DWLKDYWWKA 113
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
V V + Y A DG F+ GV+ + + + + + Q +IIA+EGS
Sbjct: 114 VSVDADKYTAHVELNKADGYFIRALPGVKTEFPVQSCMYMAKNQSIQNVHNIIIAEEGSE 173
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+ + GCT+ R E LH V E A++ ++ + W P +
Sbjct: 174 LHIITGCTSAHRTETGLHLGVTEFFIKKGAKVTFTMIHTWSPDIAVRPRTG-------AI 226
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+S + YP L GE + F S+ + ++D G+++ AK
Sbjct: 227 VEENGVFLSNYVIMKTVKSLQSYPVAYLNGENAVARFNSVMVCPPGSKMDVGSRVFLNAK 286
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T + ++++ ++ G + RG + + +C L++G+N + IP + K
Sbjct: 287 HTRTELITRALTTGGEIIS-RG--YIEGKVPDCKGHLECRGLILGDNGIIYAIPELMGKV 343
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
S +L HEA KI++E + Y + RG+ ++ A A IV GF+ ++ LP E K I
Sbjct: 344 SGVDLSHEAAVGKIAEEEVEYLMARGLNKDEATAAIVRGFLNVDVEGLPPLLKEEMDKAI 403
Query: 481 DI 482
+
Sbjct: 404 KL 405
>gi|312792333|ref|YP_004025256.1| sufbd protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179473|gb|ADQ39643.1| SufBD protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 416
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/397 (19%), Positives = 161/397 (40%), Gaps = 19/397 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + + L + E+ +T GI + E+ + D V
Sbjct: 30 DLSQFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEE--------GRAGSFLQLDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + + + I+EA+ ++P++ +KY V + Y A ++ G F+ +
Sbjct: 82 YRRLQQRYQGQ-LEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GC + + LH + E
Sbjct: 141 FKGQKVEKPIQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ + ++ V NW G+ +S L +P
Sbjct: 201 YLEKGSRLTFTMVHNWAEDFYVRPRGVT-------VVEDDAVFVSNYVLLKPVKSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ S F S+ +ID G+ ++ +N++ + +S+ I + RG +
Sbjct: 254 IAILKGKNSVASFNSLLYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGIL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
+ S+ C +L+ ++ + +P + S+ +L HEA I++E + Y +
Sbjct: 314 EARQN--LSKAHLDCRGILLSSDGMMYAVPELLSQGAPQSHLSHEAAIGPIAEEEIEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
RG+ ++ AI+LI GF+ + LP + Q+LI
Sbjct: 372 SRGLSKDEAISLITQGFMDVKILGLPKQLENYIQELI 408
>gi|84496524|ref|ZP_00995378.1| putative iron-regulated ABC-type transporter [Janibacter sp.
HTCC2649]
gi|84383292|gb|EAP99173.1| putative iron-regulated ABC-type transporter [Janibacter sp.
HTCC2649]
Length = 368
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/315 (16%), Positives = 114/315 (36%), Gaps = 18/315 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++ + P + A + +A + + +P + +G T+I
Sbjct: 66 DEWQGSGAPKPADRAAVIATAQAESITVLDVPAEAELTEPVRLILT--GEGGLSHAHTVI 123
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + + + ++ ++ +V D A++ TVQ W
Sbjct: 124 RVGKFARATIVLRHEG-----DAQYSELLSVVVGDGADVTVVTVQEWADSALHLG----- 173
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G +K+ + G I + G E + ++ Q +
Sbjct: 174 ---QHDVVVGRDAKVRHIAVTLGGGIVRLNTNASYAGPGGSFEALGVYFADAGQHQEHRL 230
Query: 354 KMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H A + S + KG ++ + G V + A + + +L++ + A +
Sbjct: 231 FVDHEAPHCKSNVEYKGALQGDSAHTVWVGDVLIRASAEGTDTYELNRNLILTDGARADS 290
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM- 470
+P +E + H + T + D+ LFY RGI E+ A L+V GF ++ ++ +
Sbjct: 291 VPNLEIETGEIAGAGHASATGRFDDQQLFYLQARGIDEDTARRLVVRGFFASIVGRIGVP 350
Query: 471 EFAVEAQKLIDISLE 485
E + ID LE
Sbjct: 351 EIEDHLMEAIDRELE 365
>gi|294828348|ref|NP_713742.2| Fe-S cluster assembly ABC transporter permease [Leptospira
interrogans serovar Lai str. 56601]
gi|293386200|gb|AAN50760.2| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Leptospira interrogans serovar Lai
str. 56601]
Length = 407
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/462 (17%), Positives = 167/462 (36%), Gaps = 63/462 (13%)
Query: 31 KAPKGLN-EDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYY 89
K L+ E+ ++ EP + ++R + ++ T+K P + I + +
Sbjct: 5 KTETKLSLENQFEKFVSQSKEPQALKDFRKKVFAKFQTLKIPGSENESWRKIPLSNFH-- 62
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
P+ V ++ + ++ E L+G
Sbjct: 63 --PEDFTEVPDFAAVVWKIPDL-----VKLQRSETLSG---------------------- 93
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
E + + + ++ + + FT G ++ I
Sbjct: 94 -----------------KELENFLNILEGIFQKQNEEWFTLYSLSNFTHGLYLEIGNDFV 136
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSY--VSYLEGCTAPQRDENQLHAAVVELVAL 267
E+ FR+ ++ LI+A GS+ + +E + E + + L
Sbjct: 137 VQEEIEIKFRLEKENKIL---PLIVAKIGSHNKILIVERYECIEEQELKFFQGLSVLQTG 193
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
+++ Y ++++ I++F D R S + ++ G +
Sbjct: 194 AGSKVSYVGIESFGS-------SIFHFQNLFSDQR-EDSDLKIAKVTPGGYKGKNLLNVD 245
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L G+ + +A + DS K++H +T S I+ + +++ + G + +
Sbjct: 246 LSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYRSALKNKAHHIFTGNLRIP 305
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
++LL+ A +IP +E + EH AT +I +E LFY RGI
Sbjct: 306 NSCKDVNAIQINNNLLLNRTSRAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGI 365
Query: 448 PEEAAIALIVNGFVREVLQKLP-MEFAVEAQKLIDISLEGSV 488
E+ A +IV+GF+ +V+ ++ E +LI +EG +
Sbjct: 366 DEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIARKVEGVI 407
>gi|262340816|ref|YP_003283671.1| FeS assembly protein [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272153|gb|ACY40061.1| FeS assembly protein [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 434
Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats.
Identities = 86/466 (18%), Positives = 154/466 (33%), Gaps = 51/466 (10%)
Query: 36 LNEDIIRFISA---KKNEPDWMLEWRLLAYRRWLTMKDPS------WARIRYPAIDFDDL 86
L E II I KK E ++ + + PS W I D
Sbjct: 3 LKEKIISLIDKYYSKKEENSYISFLQQKHINLFKKKGFPSFSENEEWKNTDINPIINQDY 62
Query: 87 YYYAAPKSIVGPQSLD-DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVV 145
+ + I + L ++ + I + L+ +
Sbjct: 63 HILCEKEKIKHIEYKKIKEFLFLKESFLFIFIDGKYNSFLSQL----------------- 105
Query: 146 TTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIP 205
GV I I + K + + + LN+ DG ++YIP
Sbjct: 106 ---------FGVKNHVILSNIASQKENEIKNYYGKLSYQYDVFYTLNTLFSKDGVYIYIP 156
Query: 206 KGVRCPMELSTYFRINEKGTGQF---ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
+ + +G+ R LI+ E S V +E + ++ + +V
Sbjct: 157 DNIVLERPIEILHISTGLESGRIMLNSRNLIVVGERSDVKIIEHHKSLKKHLAFI-NSVS 215
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
E+ A + + I Y VQ+ + + S+ S
Sbjct: 216 EIYASNYSRIDYYKVQDNSDE--------TFIIDNTFLKQKKHSQCSVWTFSFQGNFIRN 267
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
RGE++ Y I++ + Q +D T + H N S + K I S + G
Sbjct: 268 NLKFYSRGEKTSSYLYGISLLSEKQLVDHHTLIDHFYSNAYSYQLYKNILFDQSKGIFNG 327
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
K+ V+ F + ++L+ + +T P +E + H T + +E LFY
Sbjct: 328 KIIVNECIKGINAFQRNSNILLSDEACMYTKPQLEIYSEDVKCSHGCTIGNLQEEELFYL 387
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
RGI E L++ F+ E+L + E +KLI ++ +
Sbjct: 388 QSRGISERNGKILLLFSFLEEILNFI---HIFELKKLIYQKMKKKL 430
>gi|217967936|ref|YP_002353442.1| SufBD protein [Dictyoglomus turgidum DSM 6724]
gi|217337035|gb|ACK42828.1| SufBD protein [Dictyoglomus turgidum DSM 6724]
Length = 411
Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats.
Identities = 85/416 (20%), Positives = 150/416 (36%), Gaps = 29/416 (6%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ E R A + P+ DL Y V + LDD+ E+
Sbjct: 6 LKELRERALKAKNK---PALLGPDI------DLEPYMRTIRDVQVEDLDDLPDEIKENIL 56
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
GI E+E + V KE K + M I EA+ E D +
Sbjct: 57 YSGITPSEEER--------AGTYFQINHSVVYEKLKETY-KGKLEIMSIQEAL-EKYDWL 106
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ Y +V + Y A + T G F+ + + + + I E Q +I
Sbjct: 107 ENYYGRLVSPDTDKYTAWAEILPTGGYFIRVFANQKVEYPVQSCLYIKEGNISQNVHNII 166
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I +E + V GC +++ +H + E ++ ++ + NW +
Sbjct: 167 IVEENAEVFVTTGCLTHLKNQPGIHIGISEFFVKKGGKLYFTMIHNWSEEFHVRPRTVV- 225
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
I+ YP ++ E + YSI ID G
Sbjct: 226 ------LVEEGGLFINNYISLKPVKSIQSYPIIYVK-ENAIARLYSIIYGRKDSYIDLGG 278
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++ +N+ IVS+ I+ S R ++ A S+ F C +++ N I
Sbjct: 279 RIVFEGENSKGEIVSRIIADDSSQVYSRSELI--GKAKGSKGFLDCRGIILNKNAKIVAI 336
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +++++ L HEA I++E + Y RG ++ A++ I GF+ + LP
Sbjct: 337 PILDAQHPESELSHEAAIGPINEEEIEYLTTRGFDKDEAMSTITRGFLNLEIPGLP 392
>gi|320011450|gb|ADW06300.1| FeS assembly protein SufD [Streptomyces flavogriseus ATCC 33331]
Length = 393
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 60/307 (19%), Positives = 116/307 (37%), Gaps = 20/307 (6%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F S V + K + ++ +G + ++ + +
Sbjct: 103 DRVAAQAYSSFQHASVVTVAKEAVLSEPVRI--TVHGEGGVAYGHQVVELGAFAEAVVV- 159
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA V+ V D A++ +VQ+W V + G
Sbjct: 160 ----IDHTGDAVLAANVDYVLGDGAKLTVVSVQDWDDTAVH--------VGQHNALVGRD 207
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P E + + ++ Q + + H + S
Sbjct: 208 ASFKSIVVTFGGDLVRLHPRVAYAAPGGEAELFGLYFTDKGQHQEHRLLVDHNTPHCKSN 267
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
V KG ++ + G V + A + + +L++ + ++P +E +
Sbjct: 268 AVYKGALQGDDAHAVWIGDVLIQAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIV 327
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL--ID 481
H + T + DE LFY RGIP E A L+V GF E++Q++ + VEA+ L I+
Sbjct: 328 GAGHASATGRFDDEQLFYLQSRGIPAEEARRLVVRGFFAELVQQIGLP-DVEARLLDKIE 386
Query: 482 ISLEGSV 488
L+ SV
Sbjct: 387 AELKASV 393
>gi|146295584|ref|YP_001179355.1| SufBD protein [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409160|gb|ABP66164.1| SufBD protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 416
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/403 (20%), Positives = 158/403 (39%), Gaps = 20/403 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + L + E+ +T GI ++E+ +V D V
Sbjct: 30 DLSRFEEADEKEEIDELSKLPEEIQKTILNAGIEVKEE--------GRVGSFLQVDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
+ + + I+EA+ ++P++ +KY V + Y A ++ G F+ +
Sbjct: 82 YKRLAQRYSGQ-LEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSAMHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GCT + + LH + E
Sbjct: 141 FKGQKVEKPVQACLLLQENARIQNVHNIVIVEEGAEVQIINGCTTAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+++ ++ + NW G+ IS L +P
Sbjct: 201 YLEKGSKLTFTMIHNWAEDFYVRPRGVT-------IVEDDAVFISNYVLLKPVKSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ S F SI +ID G+ ++ +N++ + +S+ I + RG +
Sbjct: 254 IAILKGKNSVASFNSILYGLKDSEIDIGSHIILEGENSSGQAISRAIVKDRAKIYSRGVL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
SR C +L + +P + S +L HEA I++E + Y +
Sbjct: 314 EAKHN--QSRAHLDCRGILFSEEGVMYAVPELLSDGAPQSHLSHEAAIGPIAEEEVEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI-DISLE 485
RG+ ++ AI+LI GF+ + LP Q+LI +E
Sbjct: 372 ARGLSKDDAISLITQGFMDVKILGLPKHLENYIQELILQTQME 414
>gi|116327451|ref|YP_797171.1| ABC transporter permease [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331936|ref|YP_801654.1| ABC transporter permease [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120195|gb|ABJ78238.1| Permease component of an ABC transporter complex, Fe-S cluster
assembly [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125625|gb|ABJ76896.1| Permease component of an ABC transporter complex, Fe-S cluster
assembly [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 398
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/441 (17%), Positives = 167/441 (37%), Gaps = 58/441 (13%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
EP + ++R+ + ++ T+K P + I + + P+ V ++ + ++
Sbjct: 15 GEPQALKDFRVKVFAKFRTLKIPGSENESWRKIPLSNFH----PEEFVETPGINAISWKV 70
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
G+ ++ + L+G K F+ E+I +
Sbjct: 71 PD-----GVKLQRADSLSG--------------------------KELEFFLNNLESIFQ 99
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+ ++ + + FT G ++ + + E+ FR+ ++
Sbjct: 100 KR-------------NEEWFTLYSLSSFTHGIYIEVENDLILKEEIEIKFRLEKENK-IL 145
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
++ S E P+ + +L + + + + Y ++++
Sbjct: 146 PILVVKIGNHSKAFIAERYECPEEKDFKLLQGLTVIYTGAGSRVSYVGIESFGS------ 199
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+++F D + S + ++ G L G+ + +A G +
Sbjct: 200 -SVFHFQNLFSD-QKEDSDVKIAKITPGGYKGKNLIGVELSGKGARARVIGLAPMTGREF 257
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
DS K++H +T S I+ +G +++ + G + + ++LL+G +
Sbjct: 258 QDSEVKIVHKESHTESSILYRGAFKDKAHHIFTGNLHIPNSCKDVNAIQINNNLLLGRSA 317
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A +IP +E + EH AT +I +E LFY RGI E+ A +IV GF+ +V+ ++
Sbjct: 318 RAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVEGFLGQVIGEI 377
Query: 469 P-MEFAVEAQKLIDISLEGSV 488
E +LI +EG +
Sbjct: 378 ESDSIQQELFELIVYKVEGPI 398
>gi|110634130|ref|YP_674338.1| FeS assembly protein SufD [Mesorhizobium sp. BNC1]
gi|110285114|gb|ABG63173.1| FeS assembly protein SufD [Chelativorans sp. BNC1]
Length = 422
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 97/433 (22%), Positives = 156/433 (36%), Gaps = 54/433 (12%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E R A L P+ R A + DL + L V T+ +
Sbjct: 36 EKREQAVEI-LKKGLPN---RRVEAWHYTDLR-----------RLLSTVPAFEAATHLEQ 80
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
P+ ++ V VSV T EL +
Sbjct: 81 REPLLPGSVVLPVLNGIAKPMQELSDVSVAT-VTNELTDGSLAARL-------------- 125
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
+ D+ A+N+A TDG + IP + G R + A
Sbjct: 126 ----ALAGTDDAIGAINAAFVTDGFALDIPADAALGHPIELQNVQ--AGGQVHTRFAVRA 179
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
E + + +E L ++V L D AE+ Y +Q P D++ G IY
Sbjct: 180 GERAKATIVERQLGDG---AALVSSVSHLDVGDGAEVVYLIIQE-QPDDARHLGQIY--- 232
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G +K++ + TG + + + GE S + + G D +
Sbjct: 233 ----VKIGKDAKLTLFVMNTGGKLVRQELRIIAEGEGSEFRLRGVNLLAGDTHCDVTMIL 288
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A +T S + + G + ++G++ V R A + C++LL+ + G + P
Sbjct: 289 DHAAPHTVSTETIRNVVTGKAEGAFQGQIRVARDAQKTDAKMACNTLLLSDEGGFSSKPE 348
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT ++I HLFY + RGI E+ A L+V FV EV+++L E VE
Sbjct: 349 LEIFADDVACGHGATVTEIEPAHLFYLMARGIDEKTARGLLVKAFVAEVIEELEDEQVVE 408
Query: 476 AQKLIDISLEGSV 488
LEG +
Sbjct: 409 V-------LEGKL 414
>gi|229496659|ref|ZP_04390373.1| SufB/sufD domain protein [Porphyromonas endodontalis ATCC 35406]
gi|229316556|gb|EEN82475.1| SufB/sufD domain protein [Porphyromonas endodontalis ATCC 35406]
Length = 454
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 79/424 (18%), Positives = 148/424 (34%), Gaps = 32/424 (7%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
M R A + PS Y D DL +
Sbjct: 27 MNNAREGAREDYSAHGLPSLRSENYNRTDIHDL-----------------FSLDYGVNIN 69
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKK--SGVIFMPISEAICEHPD 171
+ P+ + + + + + + + L++ +GV + + EHP+
Sbjct: 70 GVQFPLHDTKGFSCDVEDMPYMQGIILNERFDRNLSQGLEQLPTGVYIGSLRAFLTEHPE 129
Query: 172 L---VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQ 227
K + ALN+ D +++PKGV+ L +
Sbjct: 130 REPQFAKIYGRYAETDIDGIVALNTMFAQDAVLLFVPKGVKVTEPLRLIQLVRADVPMLL 189
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F R LI+ +E S + L C + L V+E+ +NA++K V +
Sbjct: 190 FRRVLIVLEEESAIEVLV-CNHTLDKHDFLVDQVIEVHVAENAQLKLYDV-------EES 241
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ + T + SK+ L + IT G + +AI Q
Sbjct: 242 SSRMRHLSTL-CLRQYESSKVLINGLTLNNGITRNSYWTRFMGPHAELTLAGLAIGTQAQ 300
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D+ T + H+ + + K I + + G++ V A + +LL+ N
Sbjct: 301 HVDNFTYISHIFPECKTHELFKYIMDDEAVGAFAGRIFVSAQAQKTDAQQSNRNLLLSPN 360
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ P +E H TT ++ +E LFY QRG+ ++ A L+ F +V++
Sbjct: 361 ARVYSKPQLEIYADDVKCSHGMTTGQLDEEALFYMQQRGVSKDEARTLLSIAFTDDVVRL 420
Query: 468 LPME 471
+ +E
Sbjct: 421 IELE 424
>gi|269956158|ref|YP_003325947.1| FeS assembly protein SufD [Xylanimonas cellulosilytica DSM 15894]
gi|269304839|gb|ACZ30389.1| FeS assembly protein SufD [Xylanimonas cellulosilytica DSM 15894]
Length = 398
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 67/346 (19%), Positives = 118/346 (34%), Gaps = 20/346 (5%)
Query: 148 FKEELKKSGVIFM--PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIP 205
F +L +SGV P E E L T GD +A
Sbjct: 61 FAADLGESGVRVDVVPAPEVKVETVGRDDARLGTAGKPGDRTAVTAWNAFEQATVVTIPA 120
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELV 265
+ V ++ LI A+ S + + VE+V
Sbjct: 121 EAVATD--VTAVRITGASKDASVAHLLIHAERFSEAVVVVDHVG-----DATLNETVEIV 173
Query: 266 ALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPS 325
+ A + +VQ+W G ++ + G + P
Sbjct: 174 VDEGAHLTVVSVQDWADGAVHASS--------HRSTIARDGRLKHVVVTFGGDVVRITPD 225
Query: 326 CLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKV 384
GE + E + ++ Q + + H SR+ KG G ++ + G V
Sbjct: 226 ATFTGEGAEVEMDGLYFADTDQHQEHRLFVDHAQPRCKSRVTYKGALQGVGAHTVWVGDV 285
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCL 443
+ A + + +L++ + A ++P +E + H + T + DE LFY +
Sbjct: 286 LIQAAAEGTDTYELNRNLVLTDGARADSVPNLEIETGEIEGAGHASATGRFDDEQLFYLM 345
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFA-VEAQKLIDISLEGSV 488
RGI E AA L+V GF E+++++ + I+ LE S+
Sbjct: 346 SRGIHETAARRLVVRGFFAELIEQIGVPAVQDRLLASIEAELEKSM 391
>gi|254391918|ref|ZP_05007111.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|326440311|ref|ZP_08215045.1| hypothetical protein SclaA2_04563 [Streptomyces clavuligerus ATCC
27064]
gi|197705598|gb|EDY51410.1| iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
Length = 394
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 67/381 (17%), Positives = 131/381 (34%), Gaps = 24/381 (6%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+++ P+ T + + D +V T ++ + + +
Sbjct: 34 SFDVADFPVPHGREEEWRFTPLERLAGLHDGTAVATGTGVKVAVEAPEGVTVETVGRD-- 91
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
L D A ++ S V +PK + ++ +G F
Sbjct: 92 ---DARLGRAGTPVDRVAAQAYTSF-ELASVVTVPKETVLTEPVRI--AVHGEGGVAFAH 145
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+I + + + + AA VE V D A++ +VQ+W
Sbjct: 146 QVIELGPFAEAVVV-----IDHTGDAVLAANVEYVIGDGAKLTVISVQDWDDKAVH---- 196
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
V + G + + G + +P E + + ++ Q +
Sbjct: 197 ----VAQHDALVGRDASFKSVVVTFGGDLVRLHPRVSYAATGGEAELFGLYFTDRGQHQE 252
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H + S V KG G + + G V + A + + +L++ +
Sbjct: 253 HRLLVDHNKPHNRSNAVYKGALQGEDAHAVWIGDVLIRAAAEGTDTYEMNRNLVLTDGAR 312
Query: 410 AHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++P +E + H + T + DE LFY + RGIPE A L+V GF E++Q++
Sbjct: 313 VDSVPNLEIETGEIAGAGHASATGRFDDEQLFYLMARGIPEHEARRLVVRGFFAELVQQI 372
Query: 469 PMEFAVE-AQKLIDISLEGSV 488
+ E I+ LE +V
Sbjct: 373 GLPDVEERLLAKIEEELEAAV 393
>gi|240850615|ref|YP_002972015.1| FeS assembly protein SufD [Bartonella grahamii as4aup]
gi|240267738|gb|ACS51326.1| FeS assembly protein SufD [Bartonella grahamii as4aup]
Length = 420
Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 73/414 (17%), Positives = 159/414 (38%), Gaps = 46/414 (11%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
E R ++ T + PS + + + +L S + + LL
Sbjct: 32 QEIRKKTIEQFQTTRLPS---RKIESWHYTNLRTLLKSISNFSQVQDNQLVDALLSESAV 88
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
I + I E K + +S+A+ ++ +
Sbjct: 89 FSINNGKTSI--------------------------ESKVDNITVKRLSDALEDNSVQIN 122
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ + ++F LN+A TDG +IP+ + + + + F I
Sbjct: 123 QNI-----SDEDFIGQLNTAFVTDGWLFHIPENTKLNIPIELQNIQMGGQSHIFSD--IK 175
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
D+ S V ++E ++ +++ L ++++ + ++N F
Sbjct: 176 VDKNSQVMFIEHQVGSD--KDTFVSSIFSLNVAADSDVTWILIRN-------RDFNSTQF 226
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ R+K+S + GS + + L+GE+S + I + +G D
Sbjct: 227 G-RFCAVLDQRAKLSLYVINIGSQLNRQEVDIELQGEESDFQLRVINLLSGQTHSDLTMT 285
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H+ + +TS + + + + ++G + V + A + C+SL++ ++ + P
Sbjct: 286 VRHVEEKSTSTEIIRNVVTDKAVGVFQGIIRVSQKAQKTDARMACNSLILSDDAEFNAKP 345
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H AT + I+ +LFY + RGIP + A AL++ GF+ E++ ++
Sbjct: 346 ELEIFADDVACGHGATVANINHGYLFYLMARGIPFKTARALLIKGFISELIDEI 399
>gi|153953466|ref|YP_001394231.1| SufD [Clostridium kluyveri DSM 555]
gi|219854089|ref|YP_002471211.1| hypothetical protein CKR_0746 [Clostridium kluyveri NBRC 12016]
gi|146346347|gb|EDK32883.1| Predicted SufD [Clostridium kluyveri DSM 555]
gi|219567813|dbj|BAH05797.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 384
Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 59/294 (20%), Positives = 120/294 (40%), Gaps = 11/294 (3%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+F G F+ +P+ + F +++ + +I+A+ S V+++ +
Sbjct: 101 MFNSGVFIKVPQNRILHSNVRLDFNLDKDNNMVIDHNIIVAEPNSKVTFIVDYHTDNEEI 160
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ H + +++A D AE+ VQ + +KI+W +E
Sbjct: 161 SAFHNGLTKIIAKDGAEVNVIKVQRMNNKSFHFDWNM--------ALLKKSAKINWITIE 212
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS+I + L GE S YS + +G ++ D H + + S + +G+
Sbjct: 213 IGSSINVTNYNSDLLGEHSEVNIYSAYMVDGDRKQDIYYTNNHFGEKSVSNMWIEGVLKD 272
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ T++G + +G S+ + LL+ + +IP + + + H A+ KI
Sbjct: 273 RAKKTFKGNIDFKKGCHESKGSQIEEVLLLNSEVKTDSIPMLLCEEEDVDGAHAASIGKI 332
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ LFY + RG A L++ + K+P E +KL+ L +
Sbjct: 333 DEDELFYLMSRGFNYSEAQKLVIEARFNPIFDKIPEEN---LRKLLSEELNRRI 383
>gi|255017186|ref|ZP_05289312.1| FeS assembly protein SufD [Listeria monocytogenes FSL F2-515]
Length = 203
Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 4/206 (1%)
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
G + +V +RG G S+I W T L G+ S + ++ +
Sbjct: 1 GVDNLASDVTTYVNRRGHI-GTDSQIEWALGLMNDGDTINENVTNLMGDGSSADVKTVTV 59
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
G Q + T++ H K + I+S G+ + + G + GA+ S + L
Sbjct: 60 GRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVL 119
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
++ P + + H A+ ++ LFY + RGI ++ A L+++GF+
Sbjct: 120 MLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLD 179
Query: 463 EVLQKLPMEFAVEAQKLIDISLEGSV 488
V+++LP+E + ++ +EG V
Sbjct: 180 PVVRQLPIES---VKTMLREVIEGKV 202
>gi|213585085|ref|ZP_03366911.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 345
Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 57/294 (19%), Positives = 110/294 (37%), Gaps = 15/294 (5%)
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLII 234
PV + L ++ +++ + + R L +E T + L
Sbjct: 40 AAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHL-T 98
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 99 LAEGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHF 150
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
S S G+A+ + S L GE + S+A+ + D+ T
Sbjct: 151 AHNDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTW 209
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H SR + K I + + G ++V + + + ++LL+G T P
Sbjct: 210 LEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKP 269
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H AT +I DE +FY RGI ++ A +I+ F E+ + +
Sbjct: 270 QLEIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYAFAAELTEAI 323
>gi|312136143|ref|YP_004003481.1| sufbd protein [Caldicellulosiruptor owensensis OL]
gi|311776194|gb|ADQ05681.1| SufBD protein [Caldicellulosiruptor owensensis OL]
Length = 416
Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/397 (19%), Positives = 158/397 (39%), Gaps = 19/397 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + + L + E+ +T GI + E+ + D V
Sbjct: 30 DLSAFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEE--------GRSGSFLQLDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + + I+EA+ ++P++ +KY V + Y A ++ G F+ +
Sbjct: 82 YRRLQQRY-HGQLEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GC + + LH + E
Sbjct: 141 FKGQKVEKPIQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ + ++ V NW G+ +S L +P
Sbjct: 201 YLEKGSRLTFTMVHNWAEDFYVRPRGVT-------VVEDDAVFVSNYVLLKPVKSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ S F S+ +ID G+ ++ +N+ + +S+ I + RG +
Sbjct: 254 IAILKGKNSVASFNSLLYGLKDSEIDMGSHIILEGENSGGQAISRAIVKDSAKIYSRGIL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE-SKNSSCNLEHEATTSKISDEHLFYCL 443
+ S+ C +L+ ++ + +P + + +L HEA I++E + Y +
Sbjct: 314 EARQN--LSKAHLDCRGILLSDSGLMYAVPELLSAGAPQSHLSHEAAIGPIAEEEVEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
RG+ ++ AI+LI GF+ + LP + Q+LI
Sbjct: 372 SRGLSKDEAISLITQGFMDVKILGLPKQLENYIQELI 408
>gi|154244044|ref|YP_001415002.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154158129|gb|ABS65345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 80/414 (19%), Positives = 148/414 (35%), Gaps = 28/414 (6%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + + P + D L A P + LG
Sbjct: 45 FDTFADVGLPHRRVEAWRYTDLRALMREARPLAAPPDAEAKAAAATAGAMLAGLG----- 99
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
L V + V + ++G+ +++A+ + D + L V
Sbjct: 100 FRRLVVVNGAFVPELSDLAG-----------LEAGLSIRSMADAL-TNGDALTGQLGQTV 147
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTLIIADEGSY 240
D A LN+A+ DG +++ G + F F R+L++ +EG+
Sbjct: 148 ASSDAVLA-LNTALMGDGVVLHVAAGAVIERPVELVFVTTQTTPVSMFTRSLVVVEEGAS 206
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
++ +E P Q++ A+ ELV A ++ + ++G + + T
Sbjct: 207 LTLIESHEGPAGVAYQVNTAL-ELVVGAGANVERVKI------TAEGSDAV-HLATLLAK 258
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + T TG + L GE +++ +G Q D+ + H A
Sbjct: 259 VDA-NATFANTFFTTGGLVVRNQLLGHLAGEAIHARMNGVSLLSGKQHADTLLSVDHAAP 317
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
SR + + G S + ++GK++V + A + +LL+ A P +E
Sbjct: 318 AGESRESFRAVLDGASQDIFQGKIAVRQAAQKTDARMLSRALLLTETAEACAKPELEIFA 377
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
H TT + + FY + RGI + A AL++ FV EVL + E
Sbjct: 378 DDVQCGHGCTTGTLDQQLKFYLMSRGIAAKEAEALLIQAFVGEVLDAIGNEGVR 431
>gi|323360094|ref|YP_004226490.1| ABC transporter [Microbacterium testaceum StLB037]
gi|323276465|dbj|BAJ76610.1| ABC-type transport system [Microbacterium testaceum StLB037]
Length = 397
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 71/314 (22%), Positives = 121/314 (38%), Gaps = 20/314 (6%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
D A A + + IP V R+ G +I A
Sbjct: 98 GEHFRPEDLPAALAW-AHEVEAPLLRIPANVELAEP--VVVRLTGTGGLAHAHVVIEAQP 154
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S + + HA VE++ D A++ +VQNW
Sbjct: 155 NSRGTVVLRHEGTA-----QHAQNVEILVRDGAQLTVVSVQNWNDDAIHASS-------- 201
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+K++ + G + PS L G + G Y ++ S+ Q ++S + H
Sbjct: 202 HQARVDRDAKLTHVVVSFGGGVVRVNPSVELSGAGAEGRLYGLSFSDAGQHLESQVYLHH 261
Query: 358 LAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
+T ++ KG G S + + G V + A + ++ +L++ + A +IP +
Sbjct: 262 KGPHTVGDVLYKGALQGESARSVWIGDVLIGPDATGTDSYEANRNLVLTDGARADSIPNL 321
Query: 417 ESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAV 474
E + H + T + DE LFY RGI EE A L+V GF+ E++Q++ + E
Sbjct: 322 EIETGDIQGAGHASATGRFDDEQLFYLQARGIAEEEARRLVVLGFLSEIVQRIGIPELET 381
Query: 475 EAQKLIDISL-EGS 487
E I+ L EG+
Sbjct: 382 ELIAAIERELAEGA 395
>gi|294811958|ref|ZP_06770601.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
gi|294324557|gb|EFG06200.1| Iron-regulated ABC-type transporter [Streptomyces clavuligerus ATCC
27064]
Length = 345
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 62/306 (20%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA F S V +PK + ++ +G F +I + +
Sbjct: 54 DRVAAQAYTSFELASVVTVPKETVLTEPVRI--AVHGEGGVAFAHQVIELGPFAEAVVV- 110
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + AA VE V D A++ +VQ+W V + G
Sbjct: 111 ----IDHTGDAVLAANVEYVIGDGAKLTVISVQDWDDKAVH--------VAQHDALVGRD 158
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + G + +P E + + ++ Q + + H + S
Sbjct: 159 ASFKSVVVTFGGDLVRLHPRVSYAATGGEAELFGLYFTDRGQHQEHRLLVDHNKPHNRSN 218
Query: 366 IVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
V KG G + + G V + A + + +L++ + ++P +E +
Sbjct: 219 AVYKGALQGEDAHAVWIGDVLIRAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIA 278
Query: 425 -LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H + T + DE LFY + RGIPE A L+V GF E++Q++ + E I+
Sbjct: 279 GAGHASATGRFDDEQLFYLMARGIPEHEARRLVVRGFFAELVQQIGLPDVEERLLAKIEE 338
Query: 483 SLEGSV 488
LE +V
Sbjct: 339 ELEAAV 344
>gi|170782334|ref|YP_001710667.1| hypothetical protein CMS_1974 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156903|emb|CAQ02071.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 403
Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 118/317 (37%), Gaps = 20/317 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ T D A S+ + + T R + TLI
Sbjct: 97 DARIGTAGAPEDRAQANAWSSFGEVLAIAVTGE----ERVTVTVGRSELGLAPRAAHTLI 152
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A S + VE+V D AE+ TVQ W
Sbjct: 153 TAAPFSRGVVILDNVGSASLVEN-----VEIVVGDQAELTVVTVQQWDDEARH------- 200
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G +K+ + G +I PS L E + GE + ++ Q ++
Sbjct: 201 -LAAHQAVVGRDAKLKHVVVTLGGSIVRVNPSAHLSNEGADGELLGVYFADAGQHLEQQV 259
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H A NT SR+ KG G + G V + R A + ++ Q +L++ + A +
Sbjct: 260 YVDHDAPNTRSRVTYKGALQGKGARTVWIGDVLIRRSAPGTDSYEQNRNLVLTDGTRADS 319
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY RGI EE A L+V GF+ E++Q++ +
Sbjct: 320 VPNLEIETGDIAGAGHASATGRFDDEQLFYLQARGITEEEARRLVVRGFLSEIVQQIGVP 379
Query: 472 FAVE-AQKLIDISLEGS 487
E Q I+ L S
Sbjct: 380 DLEERLQAAIEAELSAS 396
>gi|260460856|ref|ZP_05809106.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
gi|259033433|gb|EEW34694.1| FeS assembly protein SufD [Mesorhizobium opportunistum WSM2075]
Length = 422
Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats.
Identities = 87/426 (20%), Positives = 157/426 (36%), Gaps = 53/426 (12%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
ML+ R A P+ R + + DL ++ D DP +
Sbjct: 34 MLK-RDDAIEAI-KHGLPT---RRVESWHYTDLRRL--------LNAVPDFDPAAAP--K 78
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVV---TTFKEELKKSGVIFMPISEAICEHP 170
+G + +LA + A D V+V + G+ +AI
Sbjct: 79 AVGPIVEGSAVLAVLNGKSDAKMPAVDGVTVERLSEKLTDGSIAPGLDPYGSDDAI---- 134
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
ALN+A DG FV I G + T R
Sbjct: 135 ------------------GALNTAFVADGYFVDIADGAELEKPIELQNLQAGGQT--HVR 174
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ G+ +E + L ++V +LV + A++ + VQ
Sbjct: 175 LPVRVGAGAKAVIVERQ---AGEGAALTSSVSQLVLGEGADVTWLIVQEQPETA------ 225
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ + G +K++ + G + + GE + + I + G D
Sbjct: 226 --THLAQFKAHIGKDAKLTLFVMNAGGRLVRQEIVVRTTGEGADFKLRGINLLAGDTHTD 283
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ H +TTS + + + G + ++G+++VH+ A + C++LL+ ++
Sbjct: 284 VTMVLDHAVPHTTSTEIVRNVVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEF 343
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
T P +E H AT ++I +HLFY + RG+ E++A L+V FV EV+++L
Sbjct: 344 STKPELEIFADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDD 403
Query: 471 EFAVEA 476
E V+A
Sbjct: 404 EAIVDA 409
>gi|297851692|ref|XP_002893727.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
gi|297339569|gb|EFH69986.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
Length = 476
Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 75/386 (19%), Positives = 135/386 (34%), Gaps = 18/386 (4%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
P P D E + R EIL + ++ + D T
Sbjct: 85 PSRKDEPFRFTDTSFIRFSQIEPVSTHQRNSEILDNLTETQFPNAVIIDGFVSNLTIGPS 144
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
GV F S E + V +++ + A D +Y+P+G +
Sbjct: 145 DLPDGVYFGSFSGLPDELTNRVSEFIGNFDSGDLFWSINGMGA--PDLMVIYVPEGCKVE 202
Query: 212 MELSTYFRINEKGT-------GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
+ + E G R ++ +EG + +E + V+E+
Sbjct: 203 NPIYLRYFSGETGDRESKRLPVSNPRGFVLVEEGGEIGIVEEFVGKDEEGFYWTNPVLEV 262
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V N ++K+S +Q + K + FV + S+ ++ TG +
Sbjct: 263 VVQKNGKLKHSYLQKESMASAHVK---WTFVRQ-----EAESEYELVEVSTGGKLGRHNV 314
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGK 383
G + E + + Q +D ++++ +SR + K I A S + G
Sbjct: 315 HVQQLGPDTLTELTTFHMCVNEQTLDLHSRIVLDHPRGSSRQLHKCIVAHSSGQAVFDGN 374
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V V+R A + SLL+ + P ++ H A S + ++ LFY
Sbjct: 375 VRVNRFAQQTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQLFYFQ 434
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLP 469
RGI E A +++ F EV++K P
Sbjct: 435 ARGINLETARRALISSFGSEVIEKFP 460
>gi|291299941|ref|YP_003511219.1| FeS assembly protein SufD [Stackebrandtia nassauensis DSM 44728]
gi|290569161|gb|ADD42126.1| FeS assembly protein SufD [Stackebrandtia nassauensis DSM 44728]
Length = 389
Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 67/381 (17%), Positives = 143/381 (37%), Gaps = 21/381 (5%)
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
+LLR+++ P T + + DS + T + + S E +
Sbjct: 22 QLLRSFDVADFPKLNGREEDWRFTPLRRLRGLHDSSAEPATAAPKHELSAACEGVTVETV 81
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+ K + +V+ D A ++ ++ + + + + + +
Sbjct: 82 TKAD----KRIGSVLTPFDRVSAQAFTS-ASEALMIAVDRNKVVHVPVVVEVKGKGADGA 136
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ T I E + V+ + T + VE+ NA + ++ +W Q
Sbjct: 137 SYGHTFIDVGESAEVTVILDHTGSATLADN-----VEINVGANAHLTVVSIADWDRDSVQ 191
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ + G + + + G + +Y S G + + Y + + G
Sbjct: 192 LQH--------QKARIGRDASLKHVAVTLGGDLVRQYLSAEFAGPNASIDAYGLYFAEGG 243
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
Q ++ + H + S + KG ++ + G V + A + + +L++
Sbjct: 244 QHLEHRQLVDHGVPDCRSNVNYKGALQDADAHTVWVGDVLIQDVATGTETYEINRNLVLS 303
Query: 406 NNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ A ++P +E + + H + T + DE LFY RGIPE+ A L+V GF ++
Sbjct: 304 DGARADSVPNLEIETGEIVSAGHASATGRFDDEQLFYLQSRGIPEDEARRLVVRGFFDDL 363
Query: 465 LQKLPMEFAVE-AQKLIDISL 484
L+++P+E E I+ L
Sbjct: 364 LRQVPVESLRERLHDAIERRL 384
>gi|88856181|ref|ZP_01130841.1| ABC transporter, membrane component [marine actinobacterium
PHSC20C1]
gi|88814500|gb|EAR24362.1| ABC transporter, membrane component [marine actinobacterium
PHSC20C1]
Length = 395
Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 70/317 (22%), Positives = 125/317 (39%), Gaps = 20/317 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K +++ + A ++ + + R + T + T+I
Sbjct: 94 DKRIASAGAPEERASANAWTSFEQALAITVTSE----EHVTLRISRADLGNTARGAHTVI 149
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A S + + + + L + VE+V + A + + +VQ+W
Sbjct: 150 TARPHSNSTIIVESSG-----DALLSENVEVVVEEGASLNFVSVQDWNDEAIHLAS---- 200
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G + + T + G + P+ L GE + GE Y + ++ Q ++
Sbjct: 201 ----HFVQVGRDATLKHTVISLGGKVVRVNPAVHLSGEGADGELYGLYFADEGQHLEQRV 256
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
M H A +T R+ KG G + + G V + R A + ++ Q +L++ A +
Sbjct: 257 YMHHKAAHTRGRVNYKGALQGAGARTVWVGDVLIGRDGAGTDSYEQNRNLVLTEGTRADS 316
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
IP +E + H + T + DE LFY RGI E A L+V GF+ E++QK+ E
Sbjct: 317 IPNLEIETGDIQGAGHASATGRFDDEQLFYLQARGISEAEARRLVVIGFLSEIVQKVGDE 376
Query: 472 -FAVEAQKLIDISLEGS 487
I+ LEGS
Sbjct: 377 QLEARLHSAIESELEGS 393
>gi|188583648|ref|YP_001927093.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
gi|179347146|gb|ACB82558.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
Length = 440
Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 88/420 (20%), Positives = 147/420 (35%), Gaps = 27/420 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + PS R A + DL AA P D G
Sbjct: 34 REEAFRFFEATGLPS---RRVEAFKYTDLR--AAITEAAPPAEAPSEDAARAAVAGAAGF 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L V VA + D + GV P++ A+ D K L
Sbjct: 89 AEVEAARLTFVNGHLVAALSDLDRIP-----------EGVTVTPLNAALA-AGDARLKLL 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-GQFERTLIIAD 236
+ V V +N LN+A DG+ + + G + + F + R L+
Sbjct: 137 APVEQVRENPIYQLNTAFLADGALISVAPGAKPQTPVHLRFVGTGETAFSTATRVLVEIG 196
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
G+ LE P Q + A+ ++ + A +++ +
Sbjct: 197 AGAEFFLLESHEGPSGLTYQPNDAL-DVRIGEEAAFRHTRLNREGDAAIALS-------- 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
R+++ L TG+ ++ + GE + + Q DS
Sbjct: 248 TISVRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGATLLGHGQLADSTLLAD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A R + K + G S ++GK+ V + A + + D LL+ ++ P +
Sbjct: 308 HAATGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
E H AT ++ LFY + RG+P A +L+V FV E ++ + E A +A
Sbjct: 368 EIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARDA 427
>gi|159038850|ref|YP_001538103.1| FeS assembly protein SufD [Salinispora arenicola CNS-205]
gi|157917685|gb|ABV99112.1| FeS assembly protein SufD [Salinispora arenicola CNS-205]
Length = 398
Score = 196 bits (499), Expect = 6e-48, Method: Composition-based stats.
Identities = 61/316 (19%), Positives = 112/316 (35%), Gaps = 17/316 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ +V+ D A T V + ++ F T +
Sbjct: 76 DPRIGSVLTPVDRISALAYR-GATQAQLVRVADEAVVAEPVTLRVVGQGVDDLAFGHTFV 134
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + + VE+ D A++ TV +W Q +
Sbjct: 135 EVGRFAEATLVLEHVGSATLADN-----VEVSVADGAKLTLVTVADWAADAVQAQHL--- 186
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G +++ Q+ G + +Y + E Y + ++ Q ++
Sbjct: 187 -----KVRLGRAARVLHVQVSLGGDVVRQYTTVDYTERGGEAELYGVYFADEGQHLEHRQ 241
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H + S + +G G S + G V + A + + +LL+ + A +
Sbjct: 242 LVDHSVPDCRSYVGYRGALQGESARTVWVGDVLIRAEATGTDTYEINRNLLLTDGARADS 301
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY + RGIPE A L+V GF E+L K+P+E
Sbjct: 302 VPNLEIETGEIAGAGHASATGRFDDEQLFYLMARGIPEAEARRLVVRGFFGELLNKIPVE 361
Query: 472 FAVE-AQKLIDISLEG 486
E I+ L G
Sbjct: 362 SLRERLGAAIEARLAG 377
>gi|82777160|ref|YP_403509.1| cysteine desulfurase activator complex subunit SufD [Shigella
dysenteriae Sd197]
gi|309788336|ref|ZP_07682940.1| feS assembly protein SufD [Shigella dysenteriae 1617]
gi|81241308|gb|ABB62018.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923718|gb|EFP69221.1| feS assembly protein SufD [Shigella dysenteriae 1617]
Length = 423
Score = 196 bits (499), Expect = 6e-48, Method: Composition-based stats.
Identities = 55/294 (18%), Positives = 99/294 (33%), Gaps = 18/294 (6%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVTGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAE 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G + S L GE S S+A+ + D+ T + H S
Sbjct: 238 NATAFSHSFLLGGTVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K I + + ++V + A + ++LL+G T P +E
Sbjct: 298 RQLHKTIVSDKGRAVFNCLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVK 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
H AT +I DE +FY RGI ++ A +I+ F E+ + L E E ++
Sbjct: 358 CSHGATEGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE---ELKQ 408
>gi|148272912|ref|YP_001222473.1| hypothetical protein CMM_1730 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830842|emb|CAN01785.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 407
Score = 196 bits (499), Expect = 6e-48, Method: Composition-based stats.
Identities = 74/333 (22%), Positives = 120/333 (36%), Gaps = 23/333 (6%)
Query: 158 IFMPISEAICEHPDLV---KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
S+A + + T D A S+ +
Sbjct: 78 YPFASSDAAGTSVSWIPRDDARIGTAGAPEDRAQANAWSSFGEALAI----DVTGEERVT 133
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
T R + T+I A S + VE+V D AE+
Sbjct: 134 VTVGRSELGSAPRAAHTVITAAPFSRGVVILDNAGSASLAEN-----VEIVVGDQAELTV 188
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
TVQ W + G +K+ + G +I PS L E +
Sbjct: 189 VTVQQWDDEARH--------LAAHQAVVGRDAKLKHVVVTLGGSIVRVNPSAHLSNEGAD 240
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHS 393
GE + ++ Q ++ + H A NT SR+ KG G + G V + R A +
Sbjct: 241 GELLGVYFADAGQHLEQQVYVDHDAPNTRSRVTYKGALQGKGARTVWIGDVLIRRSAPGT 300
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAA 452
++ Q +L++ + A ++P +E + H + T + DE LFY RGI EE A
Sbjct: 301 DSYEQNRNLVLTDGTRADSVPNLEIETGDIAGAGHASATGRFDDEQLFYLQARGITEEEA 360
Query: 453 IALIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
L+V GF+ E++Q++ + E Q I+ L
Sbjct: 361 RRLVVRGFLSEIVQQIGVPDLEERLQAAIEAEL 393
>gi|254384169|ref|ZP_04999513.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
gi|194343058|gb|EDX24024.1| iron-regulated ABC-type transporter [Streptomyces sp. Mg1]
Length = 392
Score = 196 bits (499), Expect = 6e-48, Method: Composition-based stats.
Identities = 66/383 (17%), Positives = 130/383 (33%), Gaps = 29/383 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+++ P+ T + + D +V E
Sbjct: 34 SFDVADFPVPHGREEEWRFTPLARLRGLHDGTAVADG------SMKAQIDAPEGVTIESV 87
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ + D A ++ +PK + + +G F
Sbjct: 88 ERDDARIGKAGTPVDRVAAQAFTSFTKATVVT-VPKEAVLTEPVRVSL--HGEGGTTFGH 144
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
T+ + + + + AA VE + D A++ +VQ+W
Sbjct: 145 TVFDVQAFAEAVIV-----IDHTGDGVRAANVEFLVGDGAKLTVVSVQDWDATAVHCS-- 197
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ G + + G + +P G E + + ++ Q +
Sbjct: 198 ------QHNTLVGRDASFKSVVVTFGGDVVRLHPRISYAGPGGAAELFGLYFTDAGQHQE 251
Query: 351 SGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H A + TS +V KG G ++ + G V + + A + + +L++ +
Sbjct: 252 HRLLVTHDAPHCTSNVVYKGALQGEGAHAVWIGDVLIEKSAEGTDTYEMNRNLVLTDGAR 311
Query: 410 AHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++P +E + H + T + DE LFY RGIP E A L+V GF E++Q++
Sbjct: 312 VDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQARGIPAEEARRLVVRGFFAELVQQI 371
Query: 469 PMEFAVEAQKL---IDISLEGSV 488
+ E +L I+ L+ SV
Sbjct: 372 GVADIEE--RLLTKIETELQASV 392
>gi|170747131|ref|YP_001753391.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
gi|170653653|gb|ACB22708.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
Length = 440
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 93/430 (21%), Positives = 153/430 (35%), Gaps = 28/430 (6%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A+R + PS R A + DL AA P +D G
Sbjct: 34 REEAFRFFEATGLPS---RRVEAFKYTDLR--AAITEAAPPAEAPSLDVAEAAVARAKGF 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L V V + D + GV +P+S+A+ +K+ L
Sbjct: 89 SGIEAARLTFVNGHLVRELSDLDGIP-----------EGVTVVPMSDALTRAHVDLKQ-L 136
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR-INEKGTGQFERTLIIAD 236
+ V +N LN+A DG+ + + G + L F + R L+
Sbjct: 137 APVPQARENPVYQLNTAFLADGALITVAPGAKPARPLHLRFVGAGDAPFSTATRVLVQLG 196
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ S LE P Q + A+ ++V A +++ + G ++
Sbjct: 197 EGAEFSLLESHEGPDGLTCQPNDAL-DVVVGPRAAFRHTRLNTE--------GDATIALS 247
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
++ L TG+ ++ + GE + A+ Q DS
Sbjct: 248 TLSLKVEAEGQVETVNLVTGAVLSRHQIFVHVAGEDTNLVVNGAAMLRKGQLADSTLLAD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A R K I G + ++GK+ V + A + + D LL+ + P +
Sbjct: 308 HAAVGGVGREQFKWIIDGDATGVFQGKIIVRQAAQQTDGKMKSDCLLLTDEGQMMNKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-E 475
E H AT ++ LFY + RG+P A +L+V FV E ++ + E A
Sbjct: 368 EIFADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVEAVTHEGARAA 427
Query: 476 AQKLIDISLE 485
I+ LE
Sbjct: 428 LIGAIEAWLE 437
>gi|116670651|ref|YP_831584.1| FeS assembly protein SufD [Arthrobacter sp. FB24]
gi|116610760|gb|ABK03484.1| Iron-regulated ABC transporter permease protein SufD [Arthrobacter
sp. FB24]
Length = 416
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 16/287 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
IP L G ++ A S + T H +E
Sbjct: 141 IPAEAEPAEPLRILVHGAAAGRRSNAHYVLEAGANSRSVVILEHTGAAD-----HNGNLE 195
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
++ + A + +VQ W + + G + + G ++
Sbjct: 196 VIVGEGAHLTVISVQLWEDDARH--------LAQHDAQVGKDAVYKHIAVSLGGSVVRLN 247
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRG 382
+ GE + E + ++ Q ++ + + H N S ++ KG G + + G
Sbjct: 248 SNVRFSGEGAEAELLGLYFADAGQHLEHRSFVDHNVPNCKSNVLYKGALQGKDAHTVWVG 307
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFY 441
V + + A + ++ + +L++ + C A ++P +E + H ++T + DEHLFY
Sbjct: 308 DVLIQKQAVGTDSYEKNQNLVLTDGCRADSVPNLEIETGLIEGAGHASSTGRFDDEHLFY 367
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLEGS 487
+ RGIPE+ A L+V GF+ E++QK+ + E ++ L S
Sbjct: 368 LMARGIPEDVARRLVVRGFLNEIIQKIKVPALEERLTDAVERELAAS 414
>gi|294677415|ref|YP_003578030.1| FeS assembly protein SufD [Rhodobacter capsulatus SB 1003]
gi|294476235|gb|ADE85623.1| FeS assembly protein SufD [Rhodobacter capsulatus SB 1003]
Length = 422
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 81/412 (19%), Positives = 147/412 (35%), Gaps = 43/412 (10%)
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
M P R + D P +L+ V P + E+ P+ + A
Sbjct: 35 MGLP---GRRDEYWRWTD------------PAALNAVTPAAAQAAEEEEAPLFD----AL 75
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV-VPVGDN 186
+ V VD VFD+ + ++L SGV +++ I + + L
Sbjct: 76 DRVKIVFVDGVFDAAA-----SDDLTLSGVEIARLADKIPGWAEPLYGALEAAGQDPVKR 130
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+AALN++ TDG + + ++ + + + L+ D G+ ++ LE
Sbjct: 131 PFAALNTSRATDGVLIRVTAAA--AKPINLIYVHKSEASDPILHHLVQLDPGAELTLLET 188
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
A R V+E+ A + Q G + I + + ++
Sbjct: 189 GPAGARF-----NKVMEVDVGAGARFHHIRAQ----GPDSERRAITHIFAR----VAEKA 235
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT---KMLHLAKNTT 363
+ A+T + G + A+ +G + H
Sbjct: 236 LFKSFTVTVNGALTRNEAVIEIIGNDAVAHVAGAALGDGATGAFLHDDTVFVTHAGLRCE 295
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SR V K + + T++GK+ V GA + + SLL+ ++ P +E
Sbjct: 296 SRQVFKKVLKHGAIGTFQGKILVKPGAQKTDGYQISQSLLLDDDSQFLAKPELEIYADDV 355
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
H +TT I + LFY RG+PEE A L+V F+ + + ++ E
Sbjct: 356 KCSHGSTTGAIDETALFYLRSRGVPEEEAKGLLVLSFLADAIDEIEDAGLKE 407
>gi|212703413|ref|ZP_03311541.1| hypothetical protein DESPIG_01457 [Desulfovibrio piger ATCC 29098]
gi|212673158|gb|EEB33641.1| hypothetical protein DESPIG_01457 [Desulfovibrio piger ATCC 29098]
Length = 387
Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats.
Identities = 78/377 (20%), Positives = 143/377 (37%), Gaps = 13/377 (3%)
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
+ + +L +++ +LAG+ V F ++ G+ M I
Sbjct: 16 NAAPIEDLTRLPQEDQQRLVLAGIDVHDNKVSGAFMQ-LNHADVHCTTRQEGLDLMDIRA 74
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A+ + D + +Y ++ + + G FV KGV+ + + I
Sbjct: 75 ALKKF-DGLPQYYWKLLDPNKDEITRMAYEHLNGGYFVRARKGVKISQPVQSCMFIKGNA 133
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
GQ +++ +EG+ ++ L GC Q + H + E ++ ++ + NW
Sbjct: 134 AGQAVHNIVVVEEGAELNILGGCATSQHSNDAAHLGITEYYVEKGGKLTFTMIHNWG--- 190
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
G + L YP L GE + F S+ ++
Sbjct: 191 ----DSTTVRPRSAGVVEAGGVFQNNYILLKSVGSLESYPRIDLNGEGAVATFNSVIVTP 246
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
+DSG+ + A +T I+S+ ++ G + RG + A + +C L++
Sbjct: 247 TGSYVDSGSAIHLNAPHTRGEIISRTLTTGGTIIN-RG--FIGASATPVKGHLECKGLIV 303
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G H IP ++S L HEA KI+ E + Y + RG+ E+ A + IV GF+
Sbjct: 304 G-GGRVHAIPELDSCRDGVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGFLNVD 362
Query: 465 LQKLPMEFAVEAQKLID 481
+ LP K I
Sbjct: 363 IMGLPAPLKKAMDKQIS 379
>gi|327401615|ref|YP_004342454.1| SufBD protein [Archaeoglobus veneficus SNP6]
gi|327317123|gb|AEA47739.1| SufBD protein [Archaeoglobus veneficus SNP6]
Length = 367
Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats.
Identities = 89/384 (23%), Positives = 164/384 (42%), Gaps = 26/384 (6%)
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ + +++PE+ + E +G + E A V GV
Sbjct: 3 ERIPELEPEVKKRLESVGAELSPDERSATFLQVDQDVKFSL------------KWLDGVE 50
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
M I +A+ E D VK YL V + Y L +A +G F+ G + + +
Sbjct: 51 VMGIKQAM-EKYDWVKDYLWKAVKQDQDEYTRL-AAEDFNGYFIRALPGKKVDIPVEACL 108
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ + +IIA+EGS ++ + GC + + +H + E NA++ ++ +
Sbjct: 109 YLRGIRKQKV-HNIIIAEEGSEINIISGCASHPGVASGMHIGISEFFVKKNAKLTFTMIH 167
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
+W G IS L + + YP+ L+ + + F
Sbjct: 168 SWDSGIEVRPRSA-------AIVEEGGVYISNYVLLSPVKLVQMYPTAYLKKD-ATAIFS 219
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
SI ++ +D+G+K + +N+++ I+S+ IS G S RG + AA+ R +
Sbjct: 220 SIILATEGSIVDAGSKAVLEGENSSADILSRTISKGGS-VIARG--HIVGNAANVRGHLE 276
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
C L++ H IP +E++ + +L HEA KI++E +FY + RG+ + A + I+
Sbjct: 277 CRGLMLSEKGAIHAIPELEARYPNVDLSHEAAIGKIAEEEIFYLMARGLTRDEATSAIIR 336
Query: 459 GFVREVLQKLPMEFAVEAQKLIDI 482
GF+ ++ LP E K I +
Sbjct: 337 GFMEIDIKGLPEFLKKEIDKAISL 360
>gi|312881813|ref|ZP_07741587.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370564|gb|EFP98042.1| FeS assembly protein SufD [Vibrio caribbenthicus ATCC BAA-2122]
Length = 423
Score = 196 bits (498), Expect = 8e-48, Method: Composition-based stats.
Identities = 73/427 (17%), Positives = 142/427 (33%), Gaps = 43/427 (10%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ + P+ + L + +++ +KL I E
Sbjct: 31 WDLAKQVGFPTPKHED---WKYTSLTDFRDIDFSHQAETIPT-----QADIDKLAID-AE 81
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ V ++ + D T +E K +
Sbjct: 82 TSRIVFVNGRFISELSDIDDPHYRLTLLDENAKQRLPK---------------------- 119
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL-IIADEGSY 240
P+ F+ + A + + I K + ++ G ++ + + +GS
Sbjct: 120 PINPEFFLHMTEASTRETLHIEIAKNCVVSKPIYLLNIVSRPYGGMSQQKIHVTQGQGSQ 179
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVA--LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
V +E + H + LV DNA + + + ++F
Sbjct: 180 VKIIEHLICDNLQDTSAHYSGSRLVMDVADNAGLDHYKL-------CFASDTHFHFGHN- 231
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G +K++ +T + S L GE S + S+ + Q DS T + H
Sbjct: 232 DIFIGRDAKVASHTFLFSGQLTRHHTSSQLNGENSHIDINSLTLPRKSQTYDSRTYLEHN 291
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+ TSR + K I++ S + G + V A + +LL+ C ++ P +E
Sbjct: 292 KGHCTSRQIHKVIASESSKAVFNGMIKVAPNALKTDGQMDNHNLLLSRECEVNSKPQLEI 351
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ- 477
H TT ++ E +FY RG+ +E A LI F EV +++ + F +
Sbjct: 352 YADDVKCSHGTTTGALNKEQVFYLQTRGLAKEQAEQLITLAFAAEVAEEVDIPFIRQLAL 411
Query: 478 KLIDISL 484
+ I +
Sbjct: 412 ESIKQKM 418
>gi|271967267|ref|YP_003341463.1| FeS assembly protein SufD [Streptosporangium roseum DSM 43021]
gi|270510442|gb|ACZ88720.1| FeS assembly protein SufD [Streptosporangium roseum DSM 43021]
Length = 372
Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats.
Identities = 60/344 (17%), Positives = 120/344 (34%), Gaps = 21/344 (6%)
Query: 148 FKEELKKSGVIFMPISEAICEHPDLV---KKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
+G + + + A + V + L D A AVF + + +
Sbjct: 43 LHSGAAPAGGVLIHVDAAPEVTVETVGRDDQRLGKAYVPADRVSA-QAFAVFEKATVLTV 101
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
P+ + +G + L+ + + + + VE
Sbjct: 102 PREAVASKPTVITLTGSGEGAA-YGHILVTLEPMAEAVLVLDHQGSAVYADN-----VEF 155
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V + A +K ++Q+W V+ G + + G + P
Sbjct: 156 VVGEGATLKVISLQDWADDAVH--------VSHHHALLGKDATFRSFVVTLGGDLVRLSP 207
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGK 383
S G + + + Q ++ + H N S +V KG G + + G
Sbjct: 208 SVSYSGPGGDADLTGLYFVDAGQHMEHRLLVDHSQPNCKSNVVYKGALQGEDAHAVWIGD 267
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYC 442
V + A + + +LL+ + A ++P +E H + + ++ DEH+FY
Sbjct: 268 VIIRVEAEGTDTYELNRNLLLTDGARADSVPNLEILTGEVAGAGHASASGRLDDEHIFYL 327
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLE 485
RGIP + A L++ GF ++L+K+ + E ++ LE
Sbjct: 328 QARGIPFDDARRLVIRGFFAQLLEKIELPELRERVLGKVEAELE 371
>gi|293192933|ref|ZP_06609777.1| FeS assembly protein SufD [Actinomyces odontolyticus F0309]
gi|292819989|gb|EFF78988.1| FeS assembly protein SufD [Actinomyces odontolyticus F0309]
Length = 396
Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats.
Identities = 64/317 (20%), Positives = 115/317 (36%), Gaps = 17/317 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K L TV+ GD + + V IP + E Q +I
Sbjct: 91 DKRLGTVLAPGDRTAVVAWNGF-EQATVVEIPAEAELDAPVRINVADIEGTRAQ--HIVI 147
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A++ S + + T + VE+ D+A + ++Q W
Sbjct: 148 RAEKFSKATVILSHTGSAQAAL---NQTVEVETGDSANLTVVSLQEWDDTVLHASN---- 200
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G SK++ + G + RG + I +G Q ++
Sbjct: 201 ----QRLALGRDSKLTHIVVSFGGDLVRVCADTDFRGPGAELNMLGIYFVDGGQHLEHRV 256
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H SR+ KG G ++ + G + A + + +L++ A +
Sbjct: 257 FVDHSQPKCFSRVTYKGALQGKDAHSVWIGDCLIREAADGTDTYELNRNLVLTEGAKADS 316
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E +N H + T + DE LFY + RG+PE A L+V GF E++ ++ +
Sbjct: 317 VPNLEIENGEIEGAGHASATGRFDDEQLFYLMSRGVPEHEARRLVVRGFFAELINQIGVP 376
Query: 472 FAVE-AQKLIDISLEGS 487
VE ++ L S
Sbjct: 377 EVVEHLMATVEAELAKS 393
>gi|312876282|ref|ZP_07736268.1| SufBD protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796928|gb|EFR13271.1| SufBD protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 416
Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats.
Identities = 80/397 (20%), Positives = 162/397 (40%), Gaps = 19/397 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + + L + E+ +T GI + E+ + D V
Sbjct: 30 DLSQFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEE--------GRSGSFLQLDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + + + I+EA+ ++P++ +KY V + Y A ++ G F+ +
Sbjct: 82 YRRLQQRYQGQ-LEILDINEALEKYPEVCEKYFWKAVKPDRDKYTAFSATHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GC + + LH + E
Sbjct: 141 FKGQKVEKPIQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ + ++ V NW G+ +S L +P
Sbjct: 201 YLEKGSRLTFTMVHNWAEDFYVRPRGVT-------VVEDDAVFVSNYVLLKPVKSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ S F S+ +ID G+ ++ +N++ + +S+ I + RG +
Sbjct: 254 IAILKGKNSVASFNSLLYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGIL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
+ S+ C +L+ ++ + +P + S+ +L HEA I++E + Y +
Sbjct: 314 EARQN--LSKAHLDCRGILLSSDGMMYAVPELLSQGAPQSHLSHEAAIGPIAEEEIEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
RG+ ++AAI+LI GF+ + LP + Q+LI
Sbjct: 372 SRGLSKDAAISLITQGFMDVKILGLPKQLENYIQELI 408
>gi|319407270|emb|CBI80909.1| ABC-type transport system [Bartonella sp. 1-1C]
Length = 422
Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats.
Identities = 71/412 (17%), Positives = 154/412 (37%), Gaps = 46/412 (11%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + PS + + DL S D ++ +T +KL
Sbjct: 36 IRKKAIELFQKTRLPS---RKVEYWHYTDLRVLLKSVS-------DFLEFNDKQTIDKLL 85
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I G + ++ GV + A+ ++ +
Sbjct: 86 PENIVFSIENGKALTSNKIE-------------------GVEVENLVTALDKNSAKLNST 126
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ +NF LN+A TDG + I ++ + + + F I
Sbjct: 127 I-----SDENFIGQLNTAFVTDGWLLKISDNIKLDVPIELQNIQMGGQSHTFSS--IKVG 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ S +E D++ ++V+ L N+ I + +++ +Q
Sbjct: 180 KNSQAVIIER--QIGNDKDTFVSSVISLNLAANSSITWILIRDRGESATQFS-------- 229
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ ++++ + GS + + L G++S + +I + +G D +
Sbjct: 230 QFRAVLAKNAELTLYVINIGSQLNRQEIDIELLGKESNFQLRAINLLSGKMHSDLTMTVR 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ + + S+ + + + + ++G + V + A + C+SL++ ++ + P +
Sbjct: 290 HVEEKSISKEIIRNVVTDKARGAFQGVIRVAQKAQKTDAHMACNSLILSDDAEFYVKPEL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +KI+ +HLFY + RGI + A L+V GF+ E++ +
Sbjct: 350 EIFADDVACAHGATVAKINHDHLFYLMARGISFKTACELLVKGFISELIDDI 401
>gi|302872811|ref|YP_003841447.1| SufBD protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575670|gb|ADL43461.1| SufBD protein [Caldicellulosiruptor obsidiansis OB47]
Length = 416
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 80/397 (20%), Positives = 160/397 (40%), Gaps = 19/397 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + + L + E+ +T GI + E+ + D V
Sbjct: 30 DLSAFEEAEEKDQISELSKLPEEIQKTILNAGIEVSEE--------GRSGSFLQLDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + + I+EA+ ++P++ +KY V + Y A ++ G F+ +
Sbjct: 82 YRRLQQRY-HGQLEILDINEALEKYPEVREKYFWKAVKPDRDKYTAFSATHPAHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
KG + + + E Q ++I +EG+ V + GC + + LH + E
Sbjct: 141 FKGQKVEKPIQACLLLQENARIQNVHNIVILEEGAEVQIINGCATAPKVKEGLHIGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+++ ++ V NW G+ IS L +P
Sbjct: 201 YLEKGSKLTFTMVHNWAEDFYVRPRGVT-------IVEDDAVYISNYVLLKPVKSVQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+L+G+ S F S+ +ID G+ ++ +N++ + +S+ I + RG +
Sbjct: 254 IAILKGKNSVASFNSLLYGLKDSEIDMGSHIILEGENSSGQAISRAIVKDSAKIYSRGIL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
+ S+ C +L+ ++ + +P + S +L HEA I++E + Y +
Sbjct: 314 EARQN--LSKAHLDCRGILLSSSGMMYAVPELLSDGAPQSHLSHEAAIGPIAEEEIEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
RG+ ++ AI+LI GF+ + LP + Q+LI
Sbjct: 372 ARGLSKDEAISLITQGFMDVKILGLPKQLENYIQELI 408
>gi|78484926|ref|YP_390851.1| FeS assembly protein SufD [Thiomicrospira crunogena XCL-2]
gi|78363212|gb|ABB41177.1| Iron-regulated ABC transporter permease protein SufD
[Thiomicrospira crunogena XCL-2]
Length = 434
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 76/433 (17%), Positives = 147/433 (33%), Gaps = 45/433 (10%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
LNE E + ++E R A R L++ P+ + + L +
Sbjct: 27 LNEQT---------EAEALIEKRQAAQERLLSLGLPT---RKDEDWQYTSLIPMLSHAFE 74
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
+ P +D E I + + GV + +++ F ++ +
Sbjct: 75 IKPAKAIMLDDIQSFLPEFDTIRLT---FVDGVFSEELSSGFDFIPDALSIEMADADAIQ 131
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
+ ++A ++ + G + + KG + +
Sbjct: 132 SINLEEQADAFQLMNEM----------------------LLDQGLTISLEKGEALAVPVH 169
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ RT + E S + +L+ + + + L V ++ D+A K
Sbjct: 170 ILNVQTQSEQWVNLRTQVELAENSEMMFLQQFVSLESGCSALVNDVAKVTVADHARFKQI 229
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+Q+ P + + + S I + G I+ ++ GE S
Sbjct: 230 VLQDMNPESF--------YFANQFFEQSSSSVIETNYIGLGCEISRHQNYLMMLGEHSES 281
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
SI + G Q IDS T H A + SR + K + S + G + V +GA +
Sbjct: 282 MQNSIGLGTGKQIIDSRTSTTHQAAHCNSRQLHKLVLDDQSRGVFNGMIHVVKGAQKTDG 341
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+LL+ P +E H + +I ++ +FY RGI + A+ L
Sbjct: 342 QMDNKNLLLSKTAKVDAKPQLEIYADDVKCSHGCASGQIDEQQVFYAQARGIRKADALQL 401
Query: 456 IVNGFVREVLQKL 468
I F+ E L+ +
Sbjct: 402 ITRAFLLEPLESI 414
>gi|330469142|ref|YP_004406885.1| FeS assembly protein SufD [Verrucosispora maris AB-18-032]
gi|328812113|gb|AEB46285.1| FeS assembly protein SufD [Verrucosispora maris AB-18-032]
Length = 380
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 70/388 (18%), Positives = 130/388 (33%), Gaps = 28/388 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T + P + + L + + T K G + E+
Sbjct: 2 TIQASAPPTTKSQALRSYDVADFPALTGLEEEWRFTPLKRLRGLVGDDRIATGTVRHEYA 61
Query: 171 DLVK-----------KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR 219
DL + + TV+ D A V V + +
Sbjct: 62 DLPEGVLVERIGRDDPRVGTVLTPFDRVSALAYGGV-EQALLVRVAQDAVVSGPAVLRVV 120
Query: 220 INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
F T++ + V + + VE+ D A++ TV +
Sbjct: 121 GEGSEGLAFGHTVVEVGRFAEVILVLEHVGSATLADN-----VEVTVGDGAKLTLVTVAD 175
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
W Q + G +++ Q+ G + +Y + E Y
Sbjct: 176 WADDAVQAQHL--------KVKLGRDARVLHVQVSLGGDLVRQYTTVEYTDRGGEAELYG 227
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQ 398
+ ++ Q ++ + H + S + +G G ++ + G V + A + +
Sbjct: 228 VYFADSGQHLEHRQLVDHTVPDCRSYVGYRGALQGASAHTVWVGDVLIRAEATGTDTYEI 287
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+LL+ + A ++P +E + H + T + DE LFY + RGIPE A L+V
Sbjct: 288 NRNLLLTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLMARGIPEAEARRLVV 347
Query: 458 NGFVREVLQKLPMEFAVE-AQKLIDISL 484
GF E+L K+P+E E + I+ L
Sbjct: 348 RGFFAELLNKIPVEELRERLGETIEARL 375
>gi|218886017|ref|YP_002435338.1| SufBD protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756971|gb|ACL07870.1| SufBD protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 388
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 80/383 (20%), Positives = 150/383 (39%), Gaps = 17/383 (4%)
Query: 101 LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM 160
+ + + L R++ + AG+ + F + + + G+ M
Sbjct: 13 FEGAQADTIPDLSTLDEFDRKRLLYAGIDVNAKERSGSF-MHMNHSGVHCQSTQEGLELM 71
Query: 161 PISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
I +A+ + D + +Y +V + Y + G F+ KG + + + I
Sbjct: 72 DIKQALKTY-DGLPQYFWKMVDPNRDEYTRAAAEHLHGGYFIRARKGAKIEAPVQSCLFI 130
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
G GQ ++I +EG+ + + GC H + E ++ ++ + NW
Sbjct: 131 KGNGVGQNVHNVVIVEEGAEMHIITGCATAHGTREAAHLGISEFFVHKGGKLTFTMIHNW 190
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G ++ L YP+ L G S F S+
Sbjct: 191 GEDTAVRPRSA-------GMLEEDAVLVNNYVLLKPVKDLQMYPTLTLAGRGSVARFNSV 243
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
++ +D+G ++L A +T I+++ ++ G + RG + +R +C
Sbjct: 244 IVAPEGSYVDTGNRILLNAPDTRGEIIARTLTTGGTIIN-RG--HIGAYQVPARGHLECK 300
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L++GN H IP +E L HEA KI+ E + Y + RG+ E+ A + IV GF
Sbjct: 301 GLILGNG-VIHAIPELEGTVDGVELSHEAAVGKIAQEEIEYLMARGLDEDEATSTIVRGF 359
Query: 461 VREVLQKLP--MEFAVE--AQKL 479
+ + LP +E AVE +L
Sbjct: 360 LNVDIMGLPRELEQAVEDQINQL 382
>gi|49474209|ref|YP_032251.1| hypothetical protein BQ05970 [Bartonella quintana str. Toulouse]
gi|49239713|emb|CAF26089.1| hypothetical protein BQ05970 [Bartonella quintana str. Toulouse]
Length = 422
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 70/411 (17%), Positives = 152/411 (36%), Gaps = 46/411 (11%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + T + PS + + + +L + + K+
Sbjct: 37 RKKAIELFKTERLPS---RKIESWHYTNLRTLLKS----------------VNDFSKVND 77
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+L+ + V + L +A+ E+ + + +
Sbjct: 78 EEFVNALLSKSAVFSIKNGKTTTQSKVENITAKRLA----------DALKENSIKIDQII 127
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
++F LN+A TDG +P+ + + + + F I +
Sbjct: 128 -----SDEDFIGQLNTAFVTDGWLFRVPENTKLNIPIELQNIQMGGQSHIFSD--IKMGK 180
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S ++E D +++ L +++ + +++ +G +
Sbjct: 181 NSQAVFVEH--QIGNDRETFVSSIFSLDIAAYSDVTWILIRD--------RGFYSTQFAR 230
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G +K+S + GS + + L+GE+S + I + +G D + H
Sbjct: 231 FRAVLGPSAKLSLYVINIGSQLNRQEIDVELQGEKSDFQLRVINLLSGQTHSDLTMSVRH 290
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ + +TS + + + + ++G + V + A + C+SL++ ++ P +E
Sbjct: 291 VEEKSTSTEIIRNVVTNKAVGVFQGIIRVAQKAQKTDAHMACNSLILSDDAEFDAKPELE 350
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ H AT + I+ +HLFY + RGIP + A AL++ GFV E+L +
Sbjct: 351 IFADNVACGHGATVANINHDHLFYLMARGIPFKTARALLIKGFVSELLDDI 401
>gi|256379160|ref|YP_003102820.1| FeS assembly protein SufD [Actinosynnema mirum DSM 43827]
gi|255923463|gb|ACU38974.1| FeS assembly protein SufD [Actinosynnema mirum DSM 43827]
Length = 390
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/295 (20%), Positives = 108/295 (36%), Gaps = 17/295 (5%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
GD A SA +P + +G + + AD+ +
Sbjct: 96 PGDRVAAQAWSAFAQATVIT-LPGDTEL-APTTVTVTGAGEGQVAYGHVQVRADKFAKAV 153
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+ + VE+V D A++ TVQ+W V+
Sbjct: 154 VVLDHRGSGAYADN-----VEIVVGDGADLTVVTVQDWADDAVH--------VSTHHIRL 200
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +K+ T + G + P E + + ++ Q ++ + H N
Sbjct: 201 GRDAKVRHTAVTLGGDLVRLTPLVSYADRGGDAELHGLYFADAGQHLEHRPFIDHSVPNC 260
Query: 363 TSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
S +V KG G ++ + G V + A + + +L++ + A ++P +E +
Sbjct: 261 RSNVVYKGALQGEGAHTVWIGDVLIRAAAEGTDTYELNRNLVLTDGARADSVPNLEIETG 320
Query: 422 SCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
H + T + DE LFY RGIPE+ A L+V GF E+L K+ + E
Sbjct: 321 EIEGAGHASATGRFDDEQLFYLQARGIPEDQARRLVVRGFFHEILLKISVPEVRE 375
>gi|227833041|ref|YP_002834748.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|262182471|ref|ZP_06041892.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|227454057|gb|ACP32810.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
Length = 396
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 60/319 (18%), Positives = 106/319 (33%), Gaps = 31/319 (9%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ L T D A S+ + V + + + +G F T I
Sbjct: 77 DERLGTAGAPADRVAAQAWSS-MPEAQVVTVDAEAQLEKPVEITITGAGEGVTSFGATSI 135
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + + + HA VE V D +++ +W I
Sbjct: 136 HVGHHAEATIV-----LKYVGSGTHADNVEFVLGDGSQVTVVVDADWENDAVHLSHQI-- 188
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G + + G I P + E + ++ Q ++
Sbjct: 189 ------AKVGRDAVLRHNTAIFGGEIVRLAPRVVFDAPGGDAELLGVYFADAGQYFENRL 242
Query: 354 KMLHLAKNTTSRIVSKGISAG----------------FSNNTYRGKVSVHRGAAHSRNFT 397
+ H N SR+ KG G + + G V + + A ++ +
Sbjct: 243 LVDHDVPNCRSRVFYKGALQGATAAQKAEAGSSSRTPEARTCWVGDVLIRKNANNTDTYE 302
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
++L++ A IP +E + H AT + D LFY + RGIP A LI
Sbjct: 303 TNNNLILTEGARADAIPNLEIQTGEIVGAGHAATVGRFDDLELFYLMSRGIPAAEARRLI 362
Query: 457 VNGFVREVLQKLPMEFAVE 475
+ GF EV+ ++P+E E
Sbjct: 363 IRGFFSEVISRIPVESLRE 381
>gi|160331083|ref|XP_001712249.1| sufD [Hemiselmis andersenii]
gi|159765696|gb|ABW97924.1| sufD [Hemiselmis andersenii]
Length = 471
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 62/294 (21%), Positives = 115/294 (39%), Gaps = 11/294 (3%)
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLIIADEGSYVSYL 244
F+ LN A + + +YI + + F NE ++ +I+ ++ S +
Sbjct: 179 FFPILNLANLDEIAVLYIKADSKIKDPIQILFSSSTNETPICINQKLIIVCEKNSKAKII 238
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ + + ++ + A+I + + S NF + D R
Sbjct: 239 QHHVGSN-ESEFFDNSTTTILVDEEAQIDFFLINQVTEKAS-------NFNSIHADLR-K 289
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
S ++ G ++ L G + + + Q D +++ H S
Sbjct: 290 GSSFNFLSASFGGFLSRISLGIDLNGINASCNVEGVTVVKNSQISDIHSRISHNYPLCKS 349
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ K + + + + GKV VH GA + + C SLL+ ++P +E N
Sbjct: 350 SQLQKNLISDKGHAIFAGKVQVHNGAYETESNQLCKSLLLSQTSKVDSMPILEINNEDVK 409
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
H +T S + E LFY RGIP E A L+ GF++E+++KLP E +
Sbjct: 410 CTHGSTVSDLDQEQLFYFKSRGIPIEKARFLLTIGFIKEIIEKLPKELNENLSE 463
>gi|124485493|ref|YP_001030109.1| hypothetical protein Mlab_0670 [Methanocorpusculum labreanum Z]
gi|124363034|gb|ABN06842.1| SufBD protein [Methanocorpusculum labreanum Z]
Length = 369
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 81/370 (21%), Positives = 158/370 (42%), Gaps = 13/370 (3%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+ + +E+ L G+ T + A + + GV + I +A+ E +
Sbjct: 7 FSGISPEDKERLALTGIHTDSMEGRAGSFLLVNDHILHAGSQTEGVEVLMIEKAL-EKYE 65
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+K+Y +VP + Y S G + KG + L + + + T Q
Sbjct: 66 WLKEYCWKIVPADKDQYTTYVSEHPQRGYVIIAHKGAKTTFPLQSCMFM-QGDTIQTVHN 124
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
++IA+EGS V + GC + + + H + E+ NA++ + + W I
Sbjct: 125 IVIAEEGSEVHLIAGCASSLKTKEGAHYGINEIYVGKNAKVTSTMIHTWGEE-------I 177
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
F + +S + + YP+ L+GE + F S+ ++ ID+
Sbjct: 178 EVFPRTATIVEEGGTFLSNYVCMRPTKMVQMYPTAYLKGEGAVARFSSVIVAGTGSNIDA 237
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
G++ + A NT++ ++++ I+ G + + RG + ++ +C L++ + H
Sbjct: 238 GSRAVLQAPNTSAELITRAITNGGTIIS-RGA--IIAEVPQTKGHIECRGLIL-KDGVMH 293
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
IP I+ + L HEA KI+ + + Y + RG+ EE A A I+ GF+ ++ LP
Sbjct: 294 AIPEIDGRVVDIELSHEAAVGKIARDEIEYLMARGLSEEEATATIIRGFLDVRIEGLPDA 353
Query: 472 FAVEAQKLID 481
+ + ID
Sbjct: 354 LQKQIENAID 363
>gi|254504635|ref|ZP_05116786.1| FeS assembly protein SufD [Labrenzia alexandrii DFL-11]
gi|222440706|gb|EEE47385.1| FeS assembly protein SufD [Labrenzia alexandrii DFL-11]
Length = 439
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/411 (18%), Positives = 133/411 (32%), Gaps = 28/411 (6%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + P Y D AAP + + E T+ L
Sbjct: 36 LRESALGQIKNKGLPHRRVEEYKYSDLRAFMKSAAPLATAADSAAVKGVLEASETFGDL- 94
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
++ + S VA + D+ L GV +++A+
Sbjct: 95 ----DRFKIVVANGSFVAELSDIDA----------LAAEGVTVSNLADALSGDEGAQLLK 140
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
P ++ ALN+A G V + G L G Q R I
Sbjct: 141 SPKTGP--NDGLVALNTAFVQGGVVVTVKDGAEVSKPLELVQLATATG-AQVVRNKITVG 197
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+G+ + LE V + DNA + + + ++ I
Sbjct: 198 KGAKLRVLESF--SGDTGAGEINTVFDYHVADNASVAATRLIAGKTEAARLLTTIATL-- 253
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G ++ G GE S + Y ++++ G D +
Sbjct: 254 ------GAEAEFKSLGFIAGPQFVRNQQFINFTGENSEAKIYGVSMAGGSDLADQTLIVD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + SR K + G + Y+G+++V A + +LL+ P +
Sbjct: 308 HAVPHCNSREFFKTVLDGEARGVYQGRINVAPHAQKTDGEMMTQALLLSETAEMANKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
E H AT+ +I ++ LFY RGIPE+ A L+V F+ E +++
Sbjct: 368 EIFADDVLCAHGATSGQIDEDLLFYLRARGIPEDEAKTLLVLAFLSEAIEE 418
>gi|154508722|ref|ZP_02044364.1| hypothetical protein ACTODO_01230 [Actinomyces odontolyticus ATCC
17982]
gi|153798356|gb|EDN80776.1| hypothetical protein ACTODO_01230 [Actinomyces odontolyticus ATCC
17982]
Length = 396
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 64/317 (20%), Positives = 114/317 (35%), Gaps = 17/317 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K L TV+ GD + + V IP + E Q +I
Sbjct: 91 DKRLGTVLAPGDRTAVVAWNGF-EQATVVEIPAEAELDAPVRINVADIEGTRAQ--HIVI 147
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A+ S + + T + VE+ D+A + ++Q W
Sbjct: 148 RAENFSKATVILSHTGSAQAAL---NQTVEVETGDSANLTVVSLQEWDDTVLHASN---- 200
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G SK++ + G + RG + I +G Q ++
Sbjct: 201 ----QRLALGRDSKLTHIVVSFGGDLVRVCADTDFRGPGAEINMLGIYFVDGGQHLEHRV 256
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H SR+ KG G ++ + G + A + + +L++ A +
Sbjct: 257 FVDHSQPKCFSRVTYKGALQGKDAHSVWIGDCLIREAADGTDTYELNRNLVLTEGAKADS 316
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E +N H + T + DE LFY + RG+PE A L+V GF E++ ++ +
Sbjct: 317 VPNLEIENGEIEGAGHASATGRFDDEQLFYLMSRGVPEHEARRLVVRGFFAELINQIGVP 376
Query: 472 FAVE-AQKLIDISLEGS 487
VE ++ L S
Sbjct: 377 EVVEHLMATVEAELAKS 393
>gi|326329983|ref|ZP_08196297.1| FeS assembly protein SufD [Nocardioidaceae bacterium Broad-1]
gi|325952191|gb|EGD44217.1| FeS assembly protein SufD [Nocardioidaceae bacterium Broad-1]
Length = 398
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 57/309 (18%), Positives = 117/309 (37%), Gaps = 17/309 (5%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D A +A T + V IP T +I+A++ + +
Sbjct: 90 PTDRVSARAWAA-STGATVVRIPTDTVIEGATVIRHHGTGSETAGAGHAVIVAEKFAKAT 148
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+ + + + A +E+V D A++ +VQ+W +
Sbjct: 149 VV-----LVFEGSAVVADNIEIVVEDGADLTVVSVQDWADDAVHLS--------TQHAKV 195
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + + + G + S G E + ++ Q I+ + H A T
Sbjct: 196 GRDANLKHVSVSFGGDVVRHDFSAEYAGPGGSVESLGLYFADEGQHIEHRLFVDHTAPKT 255
Query: 363 TSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
S +V KG G ++ + G V + + A + + +L++ + A ++P +E +
Sbjct: 256 KSHVVYKGALQGEKAHAVWIGNVLIRKEAEGIETYEENRNLILTDGAWADSVPNLEIETG 315
Query: 422 SCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKL 479
H + + DE LFY RGI E A L+V+GF ++++++ + E +
Sbjct: 316 EIEGAGHASAIGRFDDEQLFYLQSRGISETEAKRLVVHGFFNDLIRQIGVPELEEKLTST 375
Query: 480 IDISLEGSV 488
++ L ++
Sbjct: 376 VEAELAKTI 384
>gi|319786703|ref|YP_004146178.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
gi|317465215|gb|ADV26947.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
Length = 435
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/408 (19%), Positives = 140/408 (34%), Gaps = 33/408 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A L P A + L + D +L GI
Sbjct: 27 RRAALDALLADGLPGPRE---EAWKYTPLRALERRGFAPADATAPAFDAGVLE-----GI 78
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P G + + A +G +S+ + +L
Sbjct: 79 PAPRLVFANGRFDAAHSDLAGL--------------PAGASVEALSQVLERGEPRDANFL 124
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR--INEKGTGQFERTLIIA 235
D +A N+A+ +G+ V + GVR P L F E R I
Sbjct: 125 LRRYERRDEVFARANAALAEEGAVVRLDAGVRLPAPLHLVFVGVAQEGDRAWHLRHFIDL 184
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
EG+ + +E N L V+ L A A ++++ VQ S+
Sbjct: 185 REGAALDIVEHQLGAGEHAN-LSNDVLHLHAGKGAVVRHARVQADSARASRFA------- 236
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ ++ LE G+A++ + L G+ + + + +G + +D+ +
Sbjct: 237 -RTDAVLARDAQYRRFDLELGAALSRHELNVRLEGDGARLTANGVLLGSGRRHVDTRLGI 295
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+A++T ++ +GI+ G S + G +++ GA + +LL+ + T P
Sbjct: 296 DHVARDTACDLLWRGIADGRSRVVFHGGINIRPGADGTDANLSNKNLLLSADAEIDTQPV 355
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H AT ++ +FY RG+P A L+ F RE
Sbjct: 356 LVIDADEVKAAHGATVGQLDANAVFYLRSRGVPLPDAQRLLTVAFCRE 403
>gi|315604125|ref|ZP_07879191.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313831|gb|EFU61882.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 397
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 63/323 (19%), Positives = 115/323 (35%), Gaps = 17/323 (5%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E K L TV+ GD + + V IP + + R Q
Sbjct: 86 ETVARADKRLGTVLAPGDRTAVVAWNGF-ETATIVDIPADTQLDRPIRINVRDINGTRAQ 144
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
++ A S + + T VE+ D+A++ ++Q W
Sbjct: 145 --HIVVRAGAFSKATVILSHTGSADAGL---NQTVEVETGDSADLTVVSLQEWDDTVVHA 199
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ G SK++ + G + RG + I +G Q
Sbjct: 200 SN--------QRLALGRDSKLTHIVVTFGGDLVRLCADTDFRGPGAELSMLGIYFVDGGQ 251
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
++ + H N SR+ KG G ++ + G + A + + +L++
Sbjct: 252 HLEHRVFVDHSQPNCYSRVTYKGALQGKDAHSVWIGDCLIREAADDTDTYELNRNLVLTE 311
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A ++P +E +N H + T + DE LFY + RG+ E+ A L+V GF E++
Sbjct: 312 GAKADSVPNLEIENGEIKGAGHASATGRFDDEQLFYLMSRGVAEDEARRLVVRGFFAELI 371
Query: 466 QKLPM-EFAVEAQKLIDISLEGS 487
++ + E ++ L S
Sbjct: 372 NQIGVPEVVDHLMATVEAELAKS 394
>gi|218709891|ref|YP_002417512.1| dufD protein [Vibrio splendidus LGP32]
gi|218322910|emb|CAV19087.1| hypothetical sufD protein [Vibrio splendidus LGP32]
Length = 423
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 67/414 (16%), Positives = 132/414 (31%), Gaps = 39/414 (9%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
EW+ + + L ++ PS + L + PQ P + +
Sbjct: 24 EWQKKQWSKLLGIELPSPQHED---WKYTSLDRLNELELSSAPQQSTANTPYNKFSLDI- 79
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+ L V +A + + VT + + I E
Sbjct: 80 -----DAYRLVFVDGFFLARYSDWIPKVRVTPI------CALSPIEIDE----------- 117
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KGTGQFERTLII 234
LS + + + + A + G + + + + + +G R+ I
Sbjct: 118 -LSRSIKP--DAFTYITDATASSGILIEVEANTQVSKPIYLLHINSGKQGDVSSYRSHIE 174
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ + V+ +E + + + + A ++ +
Sbjct: 175 VADHAEVTVIEHHVSQGSGRGVTLSRLTQ-HVGCGAHYHHTKIVEEALSQHHFGHN---- 229
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + L + S L GEQ SI++ G D+ T
Sbjct: 230 ----DLVVNAHASANSCCLLYSGQLIRHQVSSELTGEQGFVAMDSISLPQGEAVFDTRTY 285
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H A + S K I+ S + + G + V A + SL++G+ ++ P
Sbjct: 286 LKHNAAHCQSEQNHKTIARNQSKSVFDGMIYVDPTAQKTDGQMDTHSLILGDEAQVNSKP 345
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H ATT +I + Y RGIP+E A +I + FV +V ++
Sbjct: 346 QLEIYADDVKCSHGATTGQIDPNQINYLRSRGIPKERAEHMITSAFVIDVTDRI 399
>gi|305681237|ref|ZP_07404044.1| FeS assembly protein SufD [Corynebacterium matruchotii ATCC 14266]
gi|305659442|gb|EFM48942.1| FeS assembly protein SufD [Corynebacterium matruchotii ATCC 14266]
Length = 386
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 66/316 (20%), Positives = 105/316 (33%), Gaps = 24/316 (7%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+ PV A SA + +V G + G F ++ +EG
Sbjct: 80 SAAPVDRVGAQAFTSA--QEAHYVKFAAGTVTNEPVQITTTGAGAGHTTFAHIVVEVEEG 137
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ N HA VE V DNA++ T +W G
Sbjct: 138 AEAVV-----NLHYQGNGTHADNVEFVIGDNAKLTVITDASWDDDAIHLSGHT------- 185
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G S + + G + P G E + ++ Q + + H
Sbjct: 186 -AILGRDSTLRHSVALFGGNVVRIIPRVRFTGPGGDAELLGVYFADDGQFFEQRLLVDHA 244
Query: 359 AKNTTSRIVSKGISAG-------FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
N S ++ KG + + G V + A + + +L++ A
Sbjct: 245 VPNCRSNVLYKGALQADPSSKKPEARTAWVGDVLIRANAQGTDTYEANRNLVLTEGARAD 304
Query: 412 TIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+P +E + H AT + DE FY RGIP E A LIV GF EV+ ++P+
Sbjct: 305 AVPNLEIETGEIIGAGHAATVGRFDDEQEFYLRARGIPPEEARRLIVRGFFSEVIGRIPV 364
Query: 471 EFAVE-AQKLIDISLE 485
E + + LE
Sbjct: 365 AAIREDLENRVAAELE 380
>gi|325919611|ref|ZP_08181623.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
gi|325549947|gb|EGD20789.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
Length = 420
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 79/416 (18%), Positives = 148/416 (35%), Gaps = 34/416 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P VD +L
Sbjct: 16 DVRRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQTAPLVPTLVDASVLDDIA-- 70
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
L V D++S ++T + GV +S ++ D ++
Sbjct: 71 ------SPRLVFVNGRPS------DALSDLSTLPD-----GVQLETLSASLAASDDA-QQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
L D +A +N+A+ +G V + +G + + L F R LI
Sbjct: 113 LLGRRFEGSDEIFARINAALADEGVLVRVQEGAQIDIPLQLVFISVAGEHDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ ++ +E D L +++ + +A + ++ VQ +
Sbjct: 173 ELRAGAALNVVEHHL-HVGDAAHLDNSLMHVHLAQDAVLSHARVQADSAHATS------- 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 225 -LLRTDAVLARNARYQRVDLELGANLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T+ +V +G+ A S + G + + GA S +LL+ N T
Sbjct: 284 GIQHIARDTSCELVWRGVGADRSRVVFHGGIHIRPGADGSDARLSNKNLLLSANAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P + H AT ++ D LFY RG+P+ A L+ F E L+ LP
Sbjct: 344 PVLVIDAEEVQAAHGATVGQLDDNALFYLRSRGLPQADAQRLLSAVFCHEPLRVLP 399
>gi|312139628|ref|YP_004006964.1| fe-s cluster assembly protein sufd [Rhodococcus equi 103S]
gi|325676696|ref|ZP_08156370.1| FeS assembly protein SufD [Rhodococcus equi ATCC 33707]
gi|311888967|emb|CBH48280.1| Fe-S cluster assembly protein SufD [Rhodococcus equi 103S]
gi|325552478|gb|EGD22166.1| FeS assembly protein SufD [Rhodococcus equi ATCC 33707]
Length = 394
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 103/298 (34%), Gaps = 21/298 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + + +G F I +E + + +
Sbjct: 95 DRVAAQAYSSFESATVVTVGRETEVAAPVHIEVTGPGEGEVAFGHLQIRLEEFAKATIVL 154
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
VE V D+A + VQ+W G
Sbjct: 155 DQKGSGTYAEN-----VEFVIGDSASLTVVAVQDWADDAVH--------TAAHHARLGRD 201
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
S + T + G + P+ E + ++ Q + + H + S
Sbjct: 202 SVLRHTSVSLGGDLVRITPTVKYAAPGGDAEMLGLYFADAGQHFEHRLLVDHSQPHCKSN 261
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+V KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 262 VVYKGALQGDPESGKPDAHTVWIGDVLIRAEAEGTDTFELNRNLVLTDGARADSVPNLEI 321
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ H + T + DE LFY RGIPE+ A L+V GF E++ ++ + E
Sbjct: 322 ETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFHEIINRIAVPEVRE 379
>gi|303327652|ref|ZP_07358092.1| SufB/sufD domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302862013|gb|EFL84947.1| SufB/sufD domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 387
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/381 (20%), Positives = 143/381 (37%), Gaps = 14/381 (3%)
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISE 164
+ + +L RE+ +LAG+ + V F E ++ G+ M I
Sbjct: 16 NAAPIDDLTRLPAEDRERLVLAGIDVNDRQVSGAFMQ-LNHAGVHCETRRDGLELMDIRA 74
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A+ + D + +Y ++ + + + G FV KG + + + I G
Sbjct: 75 ALKKF-DGLPRYYWQLLDPDKDDFTRMAREHLNGGYFVRARKGAKISEPVQSCMFIKGHG 133
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
GQ +++ +EG+ + L GC + H + E ++ ++ + NW
Sbjct: 134 AGQSIHNIVVVEEGAELHILGGCATAHEARDAAHLGITEYYVEKGGKLTFTMIHNWG--- 190
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
G + L YP L G + F S+ ++
Sbjct: 191 ----DSTTVRPRSAGRVEAGGEFQNNYILLKPVGDLQMYPLMELTGNNAVARFNSVIVAP 246
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
+D G ++ A +T ++S+ + RG + AA ++ +C L++
Sbjct: 247 AGSYVDCGNRIELNAPDTRGEVISR-VLTTGGTVINRG--YIGAAAAPAKGHLECKGLIM 303
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
G H IP + S L HEA KI+ E + Y + RG+ E+ A + IV GF+
Sbjct: 304 G-GGRIHAIPELNSNQDGVELSHEAAVGKIAQEEIEYLMARGLDEDEAASTIVRGFLNVE 362
Query: 465 LQKLPMEFAVEAQKLIDISLE 485
+ LP + I + LE
Sbjct: 363 IMGLPAPLKKAMDEQIAL-LE 382
>gi|300087786|ref|YP_003758308.1| SufBD protein [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527519|gb|ADJ25987.1| SufBD protein [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 414
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/418 (21%), Positives = 161/418 (38%), Gaps = 22/418 (5%)
Query: 77 RYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG---------IPIREQEIL-- 125
ID +L A D+D L + EK I ++ +
Sbjct: 3 DLQEIDESELKGRARAAEKKKASVGKDIDLTLFQVPEKSDSGYLENPESIEEADKARMLE 62
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+GV + + T + G+ M +S+A + D +K Y V V
Sbjct: 63 SGVMIDDRSGRSGTFVQMDNTPVHFGAVQEGIEVMSVSQAWQTY-DWLKDYWWKAVAVDA 121
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ Y A DG F+ GVR + + + Q +IIA+EGS + +
Sbjct: 122 DKYTAHVELNMADGYFIRALPGVRTEYPVQACLYLQHDWSVQDVHNIIIAEEGSELHIIT 181
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC+ E LH V E A++ +S + NW
Sbjct: 182 GCSVAHGQEMGLHLGVSEFYIKKGAKVSFSMIHNWSEETEVRPRTG-------AVIEEDG 234
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+S + P G+ + F ++ ++ +D G++ A + +
Sbjct: 235 LFLSNYVIMKPVRSIQSSPIARCIGKNATVRFNTVMVATPGSHMDLGSRAFLDAPGSRTE 294
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
++++ I+AG + RG + AA + +C L++ ++ H IP +++ + +L
Sbjct: 295 MIARAITAGGEIIS-RG--YMEGNAADIKGHLECRGLILKDDGSIHAIPELKATVPNVDL 351
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
HEA KI++E + Y + RG+ + A A I+ GF++ ++ LP +E QK I S
Sbjct: 352 SHEAAVGKIAEEEVEYMMARGLTRDKATAAIIRGFLKVDIEGLPEALNMELQKAIQAS 409
>gi|332141973|ref|YP_004427711.1| Cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
gi|327551995|gb|AEA98713.1| Cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
Length = 418
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/418 (16%), Positives = 148/418 (35%), Gaps = 37/418 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + P+ + F L ++ Q+ D++ + + +
Sbjct: 22 RQQALAQLKADGWPARRN---ESWRFTPLTPIEKREAKQAVQA-DNLPVPAIDNLNAIDL 77
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ ++ V T V V S + +A + +
Sbjct: 78 IFVDGVLVTQVNTLDVPVGMSITS------------------LNSDDAATQQA--ISSVY 117
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
V + + +N A+ G F+ + GV+ + + + R ++ E
Sbjct: 118 GK-VKPSRHMFGLVNDALCQHGIFINVEAGVKIDTPVRIVN-MASQNVDAHTRVVVKVAE 175
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ + +E D L A E D+A +++ + Q G + +
Sbjct: 176 GASATVIEQGFG---DTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKLHNR 232
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
++ T + GS ++ GE + + ++ + + D + + H
Sbjct: 233 T--------TLNSTMVGYGSELSRLDVDIHHAGEFADAKMNAVYLLAEGELFDLHSTIEH 284
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
N T+ ++GI + + G++ +HR A + +LL+ +T P +E
Sbjct: 285 AMPNGTTEENARGIVGDKARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKPELE 344
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
H AT ++I +E L+Y L RGIP A+ ++ GF++E++ +P E
Sbjct: 345 IYADDVKCAHGATVAEIEEEALYYMLTRGIPRSKALVMLNFGFIQELINDVPNGAIRE 402
>gi|218463659|ref|ZP_03503750.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli Kim 5]
Length = 281
Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats.
Identities = 60/289 (20%), Positives = 109/289 (37%), Gaps = 12/289 (4%)
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
DG V +P L F T R + G + +E A D +
Sbjct: 1 DGYVVDVPADTELENPLEIQFIHAGGQT--HTRLPVSFGAGVKATVIERHRAVTGDAAFV 58
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
+ + ++ E+ + +Q D+ + G +K+ + G
Sbjct: 59 -SHISDITIGKGTELTWIILQQQGADDTHLG--------QIRVDLGADAKLRLFVINAGG 109
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ + + GE + I + D + H +T S V + + +
Sbjct: 110 KLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVVFDRAK 169
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
++G + V A + C++LL+ ++ P +E H AT + I
Sbjct: 170 GVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDAN 229
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
HL+Y + RGIPE+ A A++VN FV E++++L E VE + +I LE
Sbjct: 230 HLYYMMARGIPEKKARAMLVNAFVAEIVEELEDEALVEVLEGVISAWLE 278
>gi|206890106|ref|YP_002248016.1| SufB/sufD domain protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742044|gb|ACI21101.1| SufB/sufD domain protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 416
Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats.
Identities = 79/386 (20%), Positives = 150/386 (38%), Gaps = 19/386 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + +SL+ + G+ + E+E D V
Sbjct: 30 DLNQFQKHIERGKIESLELLPELAKEAALMAGVDVEEKER--------SGSYVQMDHSVV 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
+ L + V M +EA+ E D ++ Y +V + Y A + T G F+ I
Sbjct: 82 YKRLSK-LYEGKVELMSTNEAV-EVYDWLEDYFWRIVQPDTDKYTAQVALNPTHGYFIRI 139
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
G + L T I E Q ++I +EG+ + + GCT + D +H + E
Sbjct: 140 LPGQKLDYPLQTCLMIAEGYISQNVHNIVIVEEGAELHIITGCTLSKADAVGIHLGISEF 199
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
++ ++ + NW Y ++ L +P
Sbjct: 200 YVKKGGKLFFTMIHNWAE-------NFYVRPRTSVMVEEDGVYVNNYALLKPVKSIQSFP 252
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ L+G+++ F ++ ID G+K++ K+T +++ I+ S RG +
Sbjct: 253 TVYLKGDRASARFNTVIYGLKDSYIDLGSKIIFEGKDTKGESLARTIADHKSVIYSRGDL 312
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK-NSSCNLEHEATTSKISDEHLFYCL 443
+ + + C ++ N+ + IP + S +L HEA+ IS+E + Y +
Sbjct: 313 -IAKTQNYCMGRLDCRGIIFSNDASIYAIPQLISHGADRADLSHEASIGPISEEQVEYLM 371
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLP 469
RG+ ++ A +LI +GF+ + LP
Sbjct: 372 SRGMTKDEATSLITSGFLNLDIPFLP 397
>gi|308806105|ref|XP_003080364.1| unnamed protein product [Ostreococcus tauri]
gi|116058824|emb|CAL54531.1| unnamed protein product [Ostreococcus tauri]
Length = 430
Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats.
Identities = 65/289 (22%), Positives = 114/289 (39%), Gaps = 14/289 (4%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF----ERTLIIADEGSYV 241
N ++A+NSA +D V + KGV+C M + +G R I+ +E + +
Sbjct: 122 NVFSAINSASASDVVVVKVAKGVKCAMPIHIVTLSTGGDSGAMRVSAPRVTIVLEEDAEL 181
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
S +E E V E+ A +K+S +QN + + VT+
Sbjct: 182 SVVEDFAGEGETEYWQ-NGVCEITLAKGASMKHSLIQNHGRSATHTR---TTLVTQ---- 233
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
S+ ++ G + G ++ ++ Q +D +K+L +
Sbjct: 234 -AEGSRYEANEVSVGGKTARHDLNIKQLGPRTETVLGCFNLAGAEQTLDLHSKVLLDHEE 292
Query: 362 TTSRIVSKGIS-AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
S + K I A + G V V+R A + +LL+ + P ++
Sbjct: 293 GVSDQLHKCIVSAASGRGVFDGNVQVNRFAQRTDAQQLSRNLLLVPKATVNVKPNLQIIA 352
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H T S + +E LFY RG+ E A +L+V+GF EV+ + P
Sbjct: 353 DDVKCTHGCTVSDLEEEELFYIRSRGLSTEIARSLLVSGFGVEVINRFP 401
>gi|25028241|ref|NP_738295.1| hypothetical protein CE1685 [Corynebacterium efficiens YS-314]
gi|259507300|ref|ZP_05750200.1| FeS assembly protein SufD [Corynebacterium efficiens YS-314]
gi|23493525|dbj|BAC18495.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165104|gb|EEW49658.1| FeS assembly protein SufD [Corynebacterium efficiens YS-314]
Length = 394
Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats.
Identities = 68/323 (21%), Positives = 109/323 (33%), Gaps = 29/323 (8%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ L D A ++ G + + + + +G F I
Sbjct: 84 DERLGRAGAPVDRVAAQAWTS-MEQGDVITFARDTQNKTPVVITVTGKGEGVTSFGAISI 142
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ G+ E A Q + HA VE + DNA + T +W
Sbjct: 143 EVEPGA-----EAIVALQYVGSGTHADNVEFIVGDNARLTVITDTHWNNDAVHLSN---- 193
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G + + T G + P E + ++ Q +
Sbjct: 194 ----QLAKIGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDGQYFEQRL 249
Query: 354 KMLHLAKNTTSRIVSKGISAG-------FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ H N S ++ KG G + + G V + A + + SL++
Sbjct: 250 LVDHAVPNCRSNVLYKGALQGDKDSDKPEARTCWVGDVLIRSNAHGTDTYEANRSLVLTE 309
Query: 407 NCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A IP +E + H AT + +DEH+FY RGIP + A LIV GF EV+
Sbjct: 310 GARADAIPNLEIETGQIVGAGHAATVGRFNDEHVFYLQARGIPADEARRLIVRGFFNEVI 369
Query: 466 QKLPMEFAVEAQKLIDISLEGSV 488
K+P+E E LE V
Sbjct: 370 NKVPVESIRE-------ELENRV 385
>gi|256832373|ref|YP_003161100.1| FeS assembly protein SufD [Jonesia denitrificans DSM 20603]
gi|256685904|gb|ACV08797.1| FeS assembly protein SufD [Jonesia denitrificans DSM 20603]
Length = 407
Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats.
Identities = 66/318 (20%), Positives = 116/318 (36%), Gaps = 18/318 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
L GD +A +T+ + V IP+ V TG LI
Sbjct: 97 DARLGKAGTPGDRTAVTAWNA-WTNATVVTIPREVVAEAATHIAVSGKADETG-AAHVLI 154
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A S + T VE+VA D++++ +VQ+W G
Sbjct: 155 HALPLSESVVVLDHTGDALLTET-----VEIVAEDDSQVTVVSVQDWNEGAVHAS----- 204
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G +++ + G + P + E + + ++ Q +
Sbjct: 205 ---AQRITLGRNARVKHVVVTFGGDVVRVTPDAVFTAEGGEVDMVGLYFADAEQHQEHRL 261
Query: 354 KMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H SR+ KG ++ + G V + A + + +L++ + A +
Sbjct: 262 FVDHAVPRCKSRVTYKGALQGDGAHAVWVGDVLIRANAEGTDTYELNRNLVLTDGARADS 321
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DE LFY RGIPE A L+V GF E++Q + +
Sbjct: 322 VPNLEIETGEIEGAGHASATGRFDDEQLFYLQARGIPEADARRLVVRGFFAELIQDIGVA 381
Query: 472 FAVE-AQKLIDISLEGSV 488
E ID L+ S+
Sbjct: 382 DVEERLIAKIDEELDKSM 399
>gi|300858510|ref|YP_003783493.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
pseudotuberculosis FRC41]
gi|300685964|gb|ADK28886.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium pseudotuberculosis
FRC41]
gi|302206222|gb|ADL10564.1| FeS assembly protein SufD [Corynebacterium pseudotuberculosis C231]
gi|302330780|gb|ADL20974.1| FeS assembly protein SufD [Corynebacterium pseudotuberculosis 1002]
gi|308276464|gb|ADO26363.1| FeS assembly protein SufD [Corynebacterium pseudotuberculosis I19]
Length = 393
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 60/326 (18%), Positives = 109/326 (33%), Gaps = 24/326 (7%)
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFT--DGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+LV+K + V G A + + + + + +
Sbjct: 75 HELVEKTDARVGRTGAPIDRVGAQAFTSTEKANVLTVSANTLVEEPIRIEVQGKGDQKTS 134
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F ++ + V + + HA VE + + A + +W
Sbjct: 135 FGHLVVEVGTNAEV-----LLDLRYTGSGTHADNVEFLVGEGARLTVIVDASWNDDAVHL 189
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
G G S G + P + E + ++ Q
Sbjct: 190 SG--------HQAVLGRDSVFRHNVAVFGGEVVRLVPRVRFTEPGADAEMLGVYFADDGQ 241
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCD 400
+ + H + S ++ KG G ++ T+ G V + GA + +
Sbjct: 242 YFEQRLLVDHAVPHCRSNVLYKGAIQGDKNSKLPDAHATWVGDVLIRAGAQGTDTYEANR 301
Query: 401 SLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+L++ + A IP +E + H AT + DE FY RGIPE+ A LIV G
Sbjct: 302 NLVLTDGARADAIPNLEIETGEIAGAGHAATVGRFDDEQEFYLRSRGIPEDEARRLIVRG 361
Query: 460 FVREVLQKLPMEFA-VEAQKLIDISL 484
F EV+ ++P+E + ++ I L
Sbjct: 362 FFSEVIGRIPVESVCNDLEERITDEL 387
>gi|309811777|ref|ZP_07705551.1| FeS assembly protein SufD [Dermacoccus sp. Ellin185]
gi|308434198|gb|EFP58056.1| FeS assembly protein SufD [Dermacoccus sp. Ellin185]
Length = 403
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 64/310 (20%), Positives = 109/310 (35%), Gaps = 17/310 (5%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TV+ GD + L A+ D S + IP + +I A
Sbjct: 97 GTVLTPGD-RASVLAHALTQDASHLVIPAEAELTQPVRLTIHGEGADKRANGHVVIEAKH 155
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S + T A VE++ D A++ +VQ W
Sbjct: 156 HSKALVILDHTGSA-----QVTANVEIITEDGADLTLVSVQRWDDDALHLADHT------ 204
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G + + G AI + G + S+ Q ++ + + H
Sbjct: 205 --ALVGRDASYRHIAVTLGGAIVRMNSNVRYAGPGGEATLLGVYFSDAGQHLEHRSFVDH 262
Query: 358 LAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
A TS + KG G + + G V + A + +L++ + A ++P +
Sbjct: 263 NAPRCTSLVTYKGALQGETARTVWVGDVLIRAEAEGIETYELNRNLVLTDGARADSVPNL 322
Query: 417 ESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAV 474
E + H ++T + DE LFY RGIPE A L+V GF +++ K+ + E
Sbjct: 323 EIETGEIEGAGHASSTGRFDDEQLFYLQARGIPEAEARRLVVRGFFADIINKIGVPEVVD 382
Query: 475 EAQKLIDISL 484
+ I+ L
Sbjct: 383 PLMQAIEAEL 392
>gi|19552776|ref|NP_600778.1| iron-regulated ABC-type transporter SufB [Corynebacterium
glutamicum ATCC 13032]
gi|62390446|ref|YP_225848.1| components of an uncharacterized iron-regulated ABC-type
transporter [Corynebacterium glutamicum ATCC 13032]
gi|21324331|dbj|BAB98956.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Corynebacterium glutamicum
ATCC 13032]
gi|41325783|emb|CAF21572.1| components of an uncharacterized iron-regulated ABC-type
transporter [Corynebacterium glutamicum ATCC 13032]
Length = 392
Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 110/336 (32%), Gaps = 23/336 (6%)
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I A E L D A ++ G+ V K P ++
Sbjct: 66 IPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSK-EQGNVVTFAKNSHNPTPVTIT 124
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+G F I + G+ A Q + HA VE + DNA + T
Sbjct: 125 VTGKGEGVTSFGAISIEVEAGADAIV-----ALQYVGSGTHADNVEFIVGDNARLTVITD 179
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+W + G + + T G + P E
Sbjct: 180 THWNADAVHLSN--------QLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEM 231
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGA 390
+ ++ Q + + H N S ++ KG G + + G V + A
Sbjct: 232 LGVYFADDGQYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDVLIRSNA 291
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPE 449
+ + SL++ A IP +E + H AT + DEH+FY RGIP
Sbjct: 292 HGTDTYEANRSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPA 351
Query: 450 EAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
E A LIV GF EV+ K+P+E E + L
Sbjct: 352 EEARRLIVRGFFNEVINKVPVESIRGELDNRVSSEL 387
>gi|330507765|ref|YP_004384193.1| SufBD domain-containing protein [Methanosaeta concilii GP-6]
gi|328928573|gb|AEB68375.1| SufBD domain protein [Methanosaeta concilii GP-6]
Length = 402
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 86/402 (21%), Positives = 160/402 (39%), Gaps = 26/402 (6%)
Query: 87 YYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVT 146
Y + K D+ + + +G+ + ++ A VQ + V A
Sbjct: 26 SYQSDAKPQSAVDDALDLPNVVKKAALDVGVTLDDESSGAYVQMDQTPVVA--------- 76
Query: 147 TFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPK 206
+ L + GV M I+ A+ ++ D ++ Y +V + Y A + G F+ K
Sbjct: 77 ---KSLYE-GVEIMDIASALKKY-DFLQDYWWKLVAADADKYTADVAEAPPAGFFIRAKK 131
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
++ + + + Q ++IA+EGS + + GCT P + LH V E
Sbjct: 132 NMKTIFPVKSCLYLGSTNLNQRVHNIVIAEEGSELHVITGCTTPAHVQRGLHIGVSEYYI 191
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
NA++ ++ V +W S + + +P+
Sbjct: 192 QKNAKVSFTMVHSWGKEVEVRPRTGVTIA-------EGGSLYNNYIMLRPVKTLQTFPTA 244
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L G + F ++ S ID G+ + A T++ +S+ + G RG +
Sbjct: 245 NLAGRGAVASFNTVIYSTMG-NIDVGSDVFLNAPETSAESISRVVCMGGD-VIARG--RM 300
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+R +C LL+ N ++IP ++ ++ HEA +IS+E L Y + RG
Sbjct: 301 TGTVPGARAHLECVGLLLSNEGRIYSIPELDGHCRDLDMSHEAAVGRISEEELEYLMARG 360
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS-LEGS 487
+ E A ++IV GF+ ++ LP E E + + L+GS
Sbjct: 361 LSSEQATSVIVRGFLDVEIKGLPEELKKEIKDITQREDLKGS 402
>gi|134098745|ref|YP_001104406.1| FeS assembly protein [Saccharopolyspora erythraea NRRL 2338]
gi|291003570|ref|ZP_06561543.1| FeS assembly protein [Saccharopolyspora erythraea NRRL 2338]
gi|133911368|emb|CAM01481.1| FeS assembly protein [Saccharopolyspora erythraea NRRL 2338]
Length = 396
Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats.
Identities = 59/305 (19%), Positives = 112/305 (36%), Gaps = 17/305 (5%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D A S+ +PK + +S +G F + A+ + +
Sbjct: 101 PADRIAAQAWSSFTEATVVT-VPKDTQPAAPISITVEGPGEGQTAFGHLQVRAERFAEAT 159
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+ + + VE V D+A + ++ +W +Q V+
Sbjct: 160 VV-----IDYRGSGVLGDNVEFVVEDSARLSVVSIHDWADDATQ--------VSSEHAGL 206
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G S + G + + + E + ++ Q ++ + H N
Sbjct: 207 GRDSVFRHLAVTLGGDLVRVNTTVNYGDKGGDAELLGLYFADAGQHLEHRMLVDHSMPNC 266
Query: 363 TSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
S ++ KG +++ + G V + A + F +L++ A ++P +E +
Sbjct: 267 RSNVLYKGALQGDGAHSVWIGDVLIRAAAEGTETFELNRNLVLTQGARADSVPNLEIETG 326
Query: 422 SCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKL 479
H + T + DE LFY RGIP+E A L+V GF E+LQK+ + E +
Sbjct: 327 EIEGAGHASATGRFDDEQLFYLQARGIPQEQARRLVVRGFFGEILQKITVPEVRERLEAA 386
Query: 480 IDISL 484
I+ L
Sbjct: 387 IEAEL 391
>gi|332670205|ref|YP_004453213.1| FeS assembly protein SufD [Cellulomonas fimi ATCC 484]
gi|332339243|gb|AEE45826.1| FeS assembly protein SufD [Cellulomonas fimi ATCC 484]
Length = 433
Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats.
Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 28/397 (7%)
Query: 105 DPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS- 163
PE R + + + G + + + L GV+ +
Sbjct: 28 TPESSRASRPTSFDVADFPVPTGREEEWRFSPVDRLAPLFAASTDGVLSGHGVLTTVVEA 87
Query: 164 -EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
E E D + L GD A ++ + +++
Sbjct: 88 PEVRVEILDRGDERLGRAGKPGDRTAAVAWASYPRATVVTI--PREQVASTVTSIKIEGV 145
Query: 223 KGTGQFE--------RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+G G + L+ A+ S + VE+VA + A +
Sbjct: 146 EGAGLHDAPLEPSASHLLVHAEALSESVVVIDHVGHAALTET-----VEIVADEGAHLTV 200
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+VQ+W G G + + + G + P GE +
Sbjct: 201 VSVQDWAEGSVHAAS--------HRVVVGRDATVKHIVVTLGGDVVRVTPDAEFVGEGAS 252
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHS 393
+ ++ Q + + H + SR+ KG G ++ + G V + A +
Sbjct: 253 VTLLGLYFADAGQHQEQRLFVDHAVPSCVSRVTYKGALQGEGAHAVWVGDVLIRAAAEGT 312
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ +L++ + A ++P +E + H + T + DE LFY RGIPE A
Sbjct: 313 DTYELNRNLVLTDGARADSVPNLEIETGVIEGAGHASATGRFDDEQLFYLRARGIPEADA 372
Query: 453 IALIVNGFVREVLQKLPMEFAVE-AQKLIDISLEGSV 488
L+V GF E++Q++ + E I+ LE S+
Sbjct: 373 RRLVVRGFFAELIQEIGVPAVEERLIGAIEKELEASM 409
>gi|145295687|ref|YP_001138508.1| hypothetical protein cgR_1614 [Corynebacterium glutamicum R]
gi|140845607|dbj|BAF54606.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 392
Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 110/336 (32%), Gaps = 23/336 (6%)
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
I A E L D A ++ G+ V K P ++
Sbjct: 66 IPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSK-EQGNVVTFAKNSHNPTPVTIT 124
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+G F I + G+ A Q + HA VE + DNA + T
Sbjct: 125 VTGKGEGVTSFGAISIEVEAGADAIV-----ALQYVGSGTHADNVEFIVGDNARLTVITD 179
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+W + G + + T G + P E
Sbjct: 180 THWNGDAVHLSN--------QLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEM 231
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGA 390
+ ++ Q + + H N S ++ KG G + + G V + A
Sbjct: 232 LGVYFADDGQYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSAKPDARTCWVGDVLIRSNA 291
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPE 449
+ + SL++ A IP +E + H AT + DEH+FY RGIP
Sbjct: 292 HGTDTYEANRSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPA 351
Query: 450 EAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
E A LIV GF EV+ K+P+E E + L
Sbjct: 352 EEARRLIVRGFFNEVINKVPVESIREELDNRVSSEL 387
>gi|225021396|ref|ZP_03710588.1| hypothetical protein CORMATOL_01415 [Corynebacterium matruchotii
ATCC 33806]
gi|224945778|gb|EEG26987.1| hypothetical protein CORMATOL_01415 [Corynebacterium matruchotii
ATCC 33806]
Length = 386
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 65/316 (20%), Positives = 105/316 (33%), Gaps = 24/316 (7%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+ PV A SA + +V G + G F ++ +EG
Sbjct: 80 SAAPVDRVGAQAFTSA--QEAHYVKFAAGTVTTEPVQITTTGAGTGHTTFAHIVVEVEEG 137
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + HA VE V DNA++ T +W G
Sbjct: 138 AEAVV-----NLHYQGSGTHADNVEFVIGDNAKLTVITDASWDDDAIHLSGHT------- 185
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G S + + G + P G E + ++ Q + + H
Sbjct: 186 -AILGRDSTLRHSVALFGGNVVRIIPRVRFTGPGGDAELLGVYFADDGQFFEQRLLVDHA 244
Query: 359 AKNTTSRIVSKGISAG-------FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
N S ++ KG + + G V + A + + +L++ A
Sbjct: 245 VPNCRSNVLYKGALQADPSSKKPEARTAWVGDVLIRANAQGTDTYEANRNLVLTEGARAD 304
Query: 412 TIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+P +E + H AT + DE FY RGIP E A LIV GF EV+ ++P+
Sbjct: 305 AVPNLEIETGEIIGAGHAATVGRFDDEQEFYLRARGIPPEEARRLIVRGFFSEVIGRIPV 364
Query: 471 EFAVE-AQKLIDISLE 485
E + + LE
Sbjct: 365 AAIREDLENRVAAELE 380
>gi|15838075|ref|NP_298763.1| ABC transporter membrane protein [Xylella fastidiosa 9a5c]
gi|9106498|gb|AAF84283.1|AE003977_6 ABC transporter membrane protein [Xylella fastidiosa 9a5c]
Length = 422
Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats.
Identities = 69/408 (16%), Positives = 131/408 (32%), Gaps = 34/408 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A PS +R + L P + +DP L T I
Sbjct: 20 RRQALDDARRDGLPS---LRSETWKYTSLRALEERHFTPAPTTATTIDPAWLNT-----I 71
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P + G + ++ + + A D
Sbjct: 72 PTPRLVFINGRHSPSLSNLSGLPQGITIHPL---------------SAPPTEQDKGLHRT 116
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERTLIIA 235
D +A LN+A+ +G + + + + + F R I
Sbjct: 117 PPHFKHRDETFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHLRNQIEL 176
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
G+ + +E L+ + + A ++++ +QN
Sbjct: 177 HCGASLQLIEHQLHTGH-AAHLNNVLTRIHLAPGACLEHARLQNDA--------TATTSF 227
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ ++ +E G+ ++ + L G+ + I + + + +D+ +
Sbjct: 228 LRTDAVLAQDAEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHI 287
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H+A+NT S ++ +GI S + G + +H+GA S +LL+ N T P
Sbjct: 288 EHIARNTASELLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPV 347
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ + H AT ++ LFY RGIP A L+ F E
Sbjct: 348 LIINANEVQAAHGATVGQLDPHALFYLRTRGIPHTTAQQLLSAAFCHE 395
>gi|72162385|ref|YP_290042.1| Iron-regulated ABC transporter permease protein SufD [Thermobifida
fusca YX]
gi|71916117|gb|AAZ56019.1| Iron-regulated ABC transporter permease protein SufD [Thermobifida
fusca YX]
Length = 384
Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats.
Identities = 57/334 (17%), Positives = 116/334 (34%), Gaps = 20/334 (5%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V + E E L T D A A + V +PK +
Sbjct: 65 VKVIAPDEVTVETVGRDDARLGTSFLPNDRVSALAYQAF-REAVVVTVPKNTEVSEPVFL 123
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
++ L+ + + + + + + ++A VE V D + +
Sbjct: 124 TVTGAQQDQA-HGHVLVRVESAASATVV-----LEYRGSSVYADNVEFVVEDGGRLNVVS 177
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+Q+W G + + G + P G E
Sbjct: 178 LQDWDRDAVHVSHQYTT--------VGRDASFRSIVVTLGGDLVRLSPKVSYSGPGGDAE 229
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRN 395
+ + + Q + + + H +T SR+ KG +G + + G V + G + +
Sbjct: 230 LFGLYFTGAGQHHEHRSLVDHNVSHTRSRVDYKGALSGEDAHAVWIGDVIIGEGTQGTDS 289
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L++ + ++P +E H +T+ ++ D HLFY RGIP + A
Sbjct: 290 YEHNRNLVLTDGTRVDSVPNLEIFTGEVEGAGHASTSGRLDDIHLFYLQSRGIPADEARR 349
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
L++ GF E++ ++ + E + I +E +
Sbjct: 350 LVIRGFFAEIIDRIEVP---ELRDRIMAEVEEKL 380
>gi|145595600|ref|YP_001159897.1| FeS assembly protein SufD [Salinispora tropica CNB-440]
gi|145304937|gb|ABP55519.1| Iron-regulated ABC transporter permease protein SufD [Salinispora
tropica CNB-440]
Length = 398
Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats.
Identities = 60/308 (19%), Positives = 108/308 (35%), Gaps = 18/308 (5%)
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
+VPV A A V + ++ F + +
Sbjct: 83 LVPVDRISALAYRGA--AQAQLVRVADEAVVAEPVTLRVVGEGADELAFGHAFVEVGRFA 140
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ + + VE+ D A++ TV +W Q +
Sbjct: 141 EATLVLEHVGSATLADN-----VEVSVADGAKLTLVTVADWADDAVQAQHL--------K 187
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
G +++ Q+ G + +Y + E Y + ++ Q ++ + H
Sbjct: 188 VRLGRAARVLHVQVSLGGDLVRQYTTVEYTERGGEAELYGVYFADEGQHLEHRQLVDHSV 247
Query: 360 KNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+ S + +G G S + G V + A + + +LL+ + A +IP +E
Sbjct: 248 PDCRSYVGYRGALQGESARTVWVGDVLIQAEATGTDTYEINRNLLLTDGARADSIPNLEI 307
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEA 476
+ H + T + DE LFY + RGIPE A L+V GF E+L K+P+E
Sbjct: 308 ETGEIAGAGHASATGRFDDEQLFYLMARGIPEAEARRLVVRGFFAELLNKIPVESLRDRL 367
Query: 477 QKLIDISL 484
I+ L
Sbjct: 368 GAAIEARL 375
>gi|326382208|ref|ZP_08203900.1| FeS assembly protein SufD [Gordonia neofelifaecis NRRL B-59395]
gi|326198938|gb|EGD56120.1| FeS assembly protein SufD [Gordonia neofelifaecis NRRL B-59395]
Length = 391
Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats.
Identities = 68/389 (17%), Positives = 128/389 (32%), Gaps = 29/389 (7%)
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
EL +Y+ + Q + T + + D +V + + +
Sbjct: 18 ELFTSYDVDAFEVPSQREESWRFTPFRRLHGLHDGTAVASGTTTVEVAGATDGVSVETVA 77
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+ L + VP + AA + F + + I K + +
Sbjct: 78 RDDQRLGEAG----VPF--DRVAAQAYSSFEKATVLTIGKEAQVAEPVVVTVEGPGTDKV 131
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ + A+ S + +E++ D+A + V W
Sbjct: 132 AYSHLQVRAEAFSKAVVVIDQRGSGVIGEN-----IEILVGDSAHLTVVNVHEWEDDA-- 184
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
V G + + + G P E + + ++G
Sbjct: 185 ------THVATHHLSLGRDAVVKHFAVSLGGHTVRLSPHVQYTAPGGDAELWGLYFADGG 238
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAG--------FSNNTYRGKVSVHRGAAHSRNFTQ 398
Q ++ + H N S + KG G ++ + G V + A + +
Sbjct: 239 QHLEQRLLVDHSQPNCRSHVTYKGALQGDPSGDKRKEAHTVWIGDVLIRPAAEGTDTYEL 298
Query: 399 CDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+L++ +N A ++P +E + H + T + DE LFY RGIPE+ A L+V
Sbjct: 299 NRNLVLTDNARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQARGIPEDQARRLVV 358
Query: 458 NGFVREVLQKLPMEFAVE-AQKLIDISLE 485
GF EVL K+ + E + I+ LE
Sbjct: 359 RGFFGEVLAKIAVPDLRERLEAAIEAELE 387
>gi|227549239|ref|ZP_03979288.1| FeS assembly protein SufD [Corynebacterium lipophiloflavum DSM
44291]
gi|227078693|gb|EEI16656.1| FeS assembly protein SufD [Corynebacterium lipophiloflavum DSM
44291]
Length = 388
Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats.
Identities = 72/345 (20%), Positives = 121/345 (35%), Gaps = 23/345 (6%)
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
L + V SE I E V + AA + T G+ V IP
Sbjct: 56 LSDARVSVEGPSEVIVETVS-PDDDRLKVAGGPVDRVAAQAWSGATSGTIVKIPDNAELT 114
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
++ F L+ + S + + + HA V + DN+
Sbjct: 115 EPVTVTITGAGLDATTFATVLVESGVNSAATVIVR-----YTGSGTHADNVNWLIGDNSR 169
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ Y+ V + D+ G + G + + T G +T P
Sbjct: 170 V-YAVVDTEWADDAVHLGA-------QSIVVGRDATLRHTVASFGGEVTRVTPRVKFTAP 221
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKV 384
E + ++ Q I++ + H N S ++ KG G + + G V
Sbjct: 222 GGDVELTGVYFADDGQYIENRLLVDHSVPNCRSNVLYKGALQGDKNSDKPDARTCWVGDV 281
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCL 443
+ A + + ++++ + A IP +E + H AT + +E +FY
Sbjct: 282 LIRAEALGTDTYETNRNMVLTDGARADAIPNLEIETGEIAGAGHAATVGRFDEEQVFYLR 341
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDISLEGS 487
RGIP E A LI+ GF EVL K+P+E E + LE +
Sbjct: 342 ARGIPTEEATRLIIRGFFNEVLNKIPVESVRDELIARVSGELEHA 386
>gi|254505870|ref|ZP_05118015.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
gi|219551093|gb|EED28073.1| FeS assembly protein SufD [Vibrio parahaemolyticus 16]
Length = 411
Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats.
Identities = 69/416 (16%), Positives = 139/416 (33%), Gaps = 41/416 (9%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDL-YYYAAPKSIVGPQSLDDVDPELLRTYE 113
+W+ + + ++ PS + + L +Y+ P QS +++ E L
Sbjct: 11 QDWQQNQFVKAKSVGLPS---AKEEGWKYTPLEQFYSLPLQPAALQSAENISYEGLS--- 64
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
LGI G +++ + K V + + A+ E +L
Sbjct: 65 -LGIDAYRLVFFDGHFSARCSDWIP---------------KVRVTPLNVLNAV-ETNELS 107
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-TGQFERTL 232
+ V + + LN A + G + + R + + + R
Sbjct: 108 R-------SVRADAFTYLNDATASGGVLIEVEPNTRVTKPIYLLHISSGQNGEVCSYRHH 160
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I S + +E + ++ + + + A +++ +
Sbjct: 161 IEMAPLSELEVIEHHISLEQGGGVTLSRLTS-YIGEGANYQHTKLIEESNQQHHFGHN-- 217
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+K + T + + S L G+ S+A+ Q DS
Sbjct: 218 ------DIRLQRDAKANSTAVLLSGLLVRHQTSSELSGDNGELAMNSVAMPRDEQTFDSR 271
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + H A + S + K I N + G + V A + SLL+ ++ +
Sbjct: 272 TYLKHNAPHCRSEQMHKIIGRDKGNAVFDGMIYVDPVALKTDGQMDTHSLLLSDHAQINC 331
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H ATT ++ + + Y RGI + A ++++ FV EV K+
Sbjct: 332 KPQLEIYADDVKCSHGATTGQLDNNQIDYMRARGINRQQAEQMLLSAFVCEVADKI 387
>gi|284990570|ref|YP_003409124.1| FeS assembly protein SufD [Geodermatophilus obscurus DSM 43160]
gi|284063815|gb|ADB74753.1| FeS assembly protein SufD [Geodermatophilus obscurus DSM 43160]
Length = 440
Score = 193 bits (490), Expect = 7e-47, Method: Composition-based stats.
Identities = 58/309 (18%), Positives = 110/309 (35%), Gaps = 16/309 (5%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+P + AAL + V +P + ++ + + ++
Sbjct: 131 KGLPEPVDRLAALARQRSGGAAVVRVPAEAQLDRAVTLRLSGTGSEDVVWGQLVVEVGAF 190
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + + R A V ++ D A++ +VQ W PG G +
Sbjct: 191 AKATVVLDHAGLARY-----AGGVAVLVGDGAQVTVVSVQEWAPGAVHGG--------QF 237
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
G + + G + + G E + + S+ Q + + H
Sbjct: 238 DAVVGRDATFKQVVVTLGGDLVRLVSNVQYAGPGGTAELFGVYFSDETQHQEHRLWVDHA 297
Query: 359 AKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
N TS ++ KG G + + G V + A + + +L++ + A ++P +E
Sbjct: 298 VPNCTSNVLYKGALQGEGARTVWIGDVRIRPSATGTDTYELNRNLVLTDGARADSVPNLE 357
Query: 418 SKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP-MEFAVE 475
+ H + T + DE LFY RGI E A L+V GF +V+Q + E
Sbjct: 358 IETGEIVGAGHASATGRFDDEQLFYLCSRGIDAETARRLVVRGFFADVVQHIGIDELQDR 417
Query: 476 AQKLIDISL 484
+ I+ L
Sbjct: 418 LMRGIETRL 426
>gi|218680797|ref|ZP_03528694.1| cysteine desulfurase activator complex subunit SufB [Rhizobium etli
CIAT 894]
Length = 122
Score = 192 bits (489), Expect = 7e-47, Method: Composition-based stats.
Identities = 94/122 (77%), Positives = 112/122 (91%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIR 120
AYRRWLT+++P+WAR+ YP IDF+D+YYYAAPKS GP+SLD+VDPELL+ YEKLGIP+R
Sbjct: 61 AYRRWLTLEEPTWARVDYPKIDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLR 120
Query: 121 EQ 122
EQ
Sbjct: 121 EQ 122
>gi|111223954|ref|YP_714748.1| hypothetical protein FRAAL4562 [Frankia alni ACN14a]
gi|111151486|emb|CAJ63204.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length = 404
Score = 192 bits (489), Expect = 9e-47, Method: Composition-based stats.
Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 23/329 (6%)
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGV 208
+ K V + E D + D AA A + V IP
Sbjct: 43 PDADGKVSVTVTAPAGIAVEQLDAADPRIGRSYTPAD-RVAAFALAHAGGATAVTIPAEA 101
Query: 209 RCPMELSTYFRINEKGTGQ-------FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ + + L+ + + + T +A
Sbjct: 102 APAEPVVVHLHGESPRPAAGTAAGIAYGHLLVEVGPFASATVVLDHTGSA-----TYAGN 156
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
VE+ A + + ++Q+W G Y+ G +K+ + G +
Sbjct: 157 VEVYVGHGASLTFVSLQDWDAGAVHVGAHAYS--------VGRDAKLRSFTVTLGGDLVR 208
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA-GFSNNTY 380
P+ RG E + ++ Q + + H ++ SR+ KG +++ +
Sbjct: 209 LSPTVDYRGPGGDAELNGVFFTDAGQHQEHRLLVTHTPRSCRSRVTYKGALRGDGAHSVW 268
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHL 439
G V + A + + +L++ + A ++P +E H + T + DE L
Sbjct: 269 IGDVVIGADAVDTDTYELNRNLVLTDGARADSVPNLEILTGEVVGAGHASATGRFDDEAL 328
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKL 468
FY RGIP A L+V+GF EV+ ++
Sbjct: 329 FYLQSRGIPPAEARRLVVHGFFAEVIDRI 357
>gi|38233879|ref|NP_939646.1| hypothetical protein DIP1294 [Corynebacterium diphtheriae NCTC
13129]
gi|38200140|emb|CAE49821.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 391
Score = 192 bits (489), Expect = 9e-47, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 101/298 (33%), Gaps = 22/298 (7%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ V + + + F +I + + E +
Sbjct: 99 KEAYVVTVARNAVVTEPIKISVTGQGNDATSFGHIVIDVEANA-----EALVDLRYTGTG 153
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
HA VE + DNA + +W G + G + + G
Sbjct: 154 THADNVEFLIGDNARLTVIVDASWDNTAVHLSG--------QQAVLGRDAVLRHNVAVFG 205
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF- 375
+ P E I ++ Q + + H S ++ KG G
Sbjct: 206 GEVVRLVPRVKFTQPGGDAEMLGIYFADDGQYFEQRLLVDHAVPQCRSNVLYKGAIQGDK 265
Query: 376 ------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHE 428
++ T+ G V + GA + + +L++ + A IP +E + H
Sbjct: 266 NSPLPDAHATWVGDVLIRSGAQGTDTYEANRNLVLTDGARADAIPNLEIETGDIAGAGHA 325
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
AT + DEH FY RGIP++ A LI+ GF EV+ ++P++ E + + L+
Sbjct: 326 ATVGRFDDEHEFYLRSRGIPQDEARRLIIRGFFSEVINRIPVDSVREDLENRVSEELK 383
>gi|296269944|ref|YP_003652576.1| FeS assembly protein SufD [Thermobispora bispora DSM 43833]
gi|296092731|gb|ADG88683.1| FeS assembly protein SufD [Thermobispora bispora DSM 43833]
Length = 372
Score = 192 bits (488), Expect = 1e-46, Method: Composition-based stats.
Identities = 56/332 (16%), Positives = 114/332 (34%), Gaps = 19/332 (5%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V E E + D A A F + + +P+ +
Sbjct: 56 VEVDAAPEVRVETVKRDDPRIGRAYTPTDRVSA-QAYASFETATVLTVPREAAASRPTTI 114
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
R G F T+++ + + + + + VE + A ++ +
Sbjct: 115 NVRGT--GGVGFGHTVVVLEPMAEATVILDHRGGGVYADN-----VEFDIGEGATLRVVS 167
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+Q+W V G + + G + PS E
Sbjct: 168 LQDWDDTAVH--------VAHHHARLGKDATFRSFVVTVGGDLVRLSPSVGFTAPGGDAE 219
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRN 395
+ + Q ++ + H + SR+ KG G ++ + G V + A +
Sbjct: 220 LLGLYYVDAGQHLEHRLLVDHSVPDCRSRVTYKGALQGEGAHAVWVGDVIIRTEATGTDT 279
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L++ + A ++P +E H + + ++ +EHLFY RGIP + A
Sbjct: 280 YELNRNLILTDGARADSVPNLEILTGEVVGAGHASASGRLDEEHLFYLQSRGIPYQEARR 339
Query: 455 LIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
L+V+GF E+++ + + E ++ LE
Sbjct: 340 LVVHGFFAELIENIEVPEVRERVLATVEAELE 371
>gi|86148047|ref|ZP_01066349.1| cysteine desulfurase modulator [Vibrio sp. MED222]
gi|85834180|gb|EAQ52336.1| cysteine desulfurase modulator [Vibrio sp. MED222]
Length = 423
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 66/414 (15%), Positives = 131/414 (31%), Gaps = 39/414 (9%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
EW+ + + L ++ PS + L + PQ P + +
Sbjct: 24 EWQKKQWSKLLGVELPSPQHED---WKYTPLDRLNELELSSAPQQSTANTPYNKFSLDI- 79
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
+ L V +A + + VT + + I E
Sbjct: 80 -----DAYRLVFVDGFFLARYSDWIPKVRVTPI------CAISPIEIDE----------- 117
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE-KGTGQFERTLII 234
LS + + + + A + G + + + + + +G R+ I
Sbjct: 118 -LSRSIKP--DAFTYITDATASSGILIEVEANTQVSKPIYLLHINSGKQGDVSSYRSHIE 174
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ + V+ +E + + + + A ++ +
Sbjct: 175 VADHAEVTVIEHHVSQGSGRGVTLSRLTQ-HVGCGAHYHHTKIVEEALSQHHFGHN---- 229
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ L + S L GEQ SI++ G D+ T
Sbjct: 230 ----DLVINAHASAYSCCLLYSGQLIRHQVSSELTGEQGFVAMDSISLPQGEAVFDTRTY 285
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + + S K I+ S + + G + V A + SL++G+ ++ P
Sbjct: 286 LKHNSPHCQSEQNHKTIARNQSKSVFDGMIYVDPTAQKTDGQMDTHSLILGDEAQVNSKP 345
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+E H ATT +I + Y RGIP+E A +I + FV V +++
Sbjct: 346 QLEIYADDVKCSHGATTGQIDPNQINYLRSRGIPKERAEHMITSAFVIGVTERI 399
>gi|320093503|ref|ZP_08025400.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979548|gb|EFW11013.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 397
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 69/385 (17%), Positives = 132/385 (34%), Gaps = 23/385 (5%)
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
+ ++ GIP+ T +DA+FD + + + +
Sbjct: 30 ADRPTSFSLDGIPVPAGREEDWRFTPLRRIDALFDPANY------DRGDAPISVDAPDGV 83
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
E D L V+ GD + + V IP+ + E
Sbjct: 84 TVETADRSDARLGRVLAPGDRTAVVAWNGF-DQATVVEIPREAEPASPVRIAVTGVEGTR 142
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
Q ++ A S + + + +E+ A D A++ ++Q W
Sbjct: 143 CQ--HLVVRAGAMSRATVI---VSHTGSPGARVNQGIEVEAGDGADLTVVSLQEWDDTVV 197
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
+ G +K++ + G + RG S + +
Sbjct: 198 HASN--------QRLALGRDAKLTHIVVTFGGDLVRVCSDTDFRGPGSELTMLGLYFVDA 249
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q ++ + H N SR+ KG G ++ + G + A + + +L++
Sbjct: 250 GQHLEHRVFVDHAQPNCYSRVTYKGALQGKDAHSVWIGDCLIREAADDTDTYELNRNLVL 309
Query: 405 GNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
A ++P +E +N H + T + DE LFY + RG+PE A L+V GF E
Sbjct: 310 TEGARADSVPNLEIENGEIKGAGHASATGRFDDEQLFYLMSRGVPESEARRLVVRGFFAE 369
Query: 464 VLQKLPMEFAVE-AQKLIDISLEGS 487
++ ++ + VE ++ L S
Sbjct: 370 LVNQIGVPEVVEHLMTTVEAELAKS 394
>gi|300784736|ref|YP_003765027.1| Fe-S cluster assembly protein SufD [Amycolatopsis mediterranei U32]
gi|299794250|gb|ADJ44625.1| Fe-S cluster assembly protein SufD [Amycolatopsis mediterranei U32]
Length = 390
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 60/298 (20%), Positives = 111/298 (37%), Gaps = 15/298 (5%)
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
V + AA + FT + V +PK + + + + A+ +
Sbjct: 91 AAGVPSDRIAAQAYSAFTKATVVTVPKETKASKPSVLRIHGPGEDQVAYGHLQVRAEAFA 150
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ + VE V D A++ +VQ+W V+++
Sbjct: 151 EAVIVLDHVGSGTYADN-----VEFVIGDGAKVTVVSVQDWADDAVH--------VSEQH 197
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
G + + T + G + P+ + E + ++ Q + + H
Sbjct: 198 LKLGRDAALRHTVITLGGDLVRVSPTATFADKGGDVEMLGVYFADRGQHQEHRLFVDHAV 257
Query: 360 KNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
N SR++ KG G ++ + G V + A + + +L++ A ++P +E
Sbjct: 258 PNCKSRVMYKGALQGEGAHTVWIGDVLIRAAAEATDTYELNRNLVLTPGARADSVPNLEI 317
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ H + T + DE LFY RGI EEAA L+V GF E+L K+ + E
Sbjct: 318 ETGEIEGAGHASATGRFDDEQLFYLQSRGIAEEAARRLVVRGFFHEILVKIDVPEVRE 375
>gi|319404264|emb|CBI77857.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 422
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 70/412 (16%), Positives = 150/412 (36%), Gaps = 46/412 (11%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + PS + + DL S + + +LL E +
Sbjct: 36 IRKKAIELFQKTRLPS---RKVEYWHYTDLRVLLKSVSEFSEFNDEQTIDKLLP--ENIV 90
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I + L + GV + A+ ++ +
Sbjct: 91 FSIENGKALTSNKIE------------------------GVEVENLVTALDKNSAKLNSI 126
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ +NF LN+A TDG F I ++ + + + F I
Sbjct: 127 I-----SDENFIGQLNTAFVTDGWFFKISDNIQLDVPIELQNIQMGGQSHTFSS--IKVG 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ S +E D++ ++V L N+ I + +++ +Q
Sbjct: 180 KNSQAVIIER--QIGNDKDTFVSSVFSLDLAVNSNITWILIRDRGESATQFS-------- 229
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ ++++ + GS + + L G+++ + +I + +G D +
Sbjct: 230 QFRAVLAENAELTLYVINIGSQLNRQEIDIELLGKEANFQLRAINLLSGKMHSDLTMTVR 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ + + S+ + + + + ++G + V + A + C+SL++ ++ P +
Sbjct: 290 HVEEKSISKEIIRNVITDKARGAFQGVIRVAQKAQKTDARMACNSLILSDDAEFDVKPEL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
E H AT +KI+ +HLFY + RGI + A L+V GF+ E++ +
Sbjct: 350 EIFADDVACAHGATVAKINHDHLFYLMARGISFKTACELLVKGFISELIDDI 401
>gi|301166540|emb|CBW26116.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 417
Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats.
Identities = 69/415 (16%), Positives = 128/415 (30%), Gaps = 45/415 (10%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ + A + P + + + + L Y
Sbjct: 21 DVQKSALNFFKERGLP---HTKMEDWLYTKVTDVVPESFKLAKTDSAKEIESPLGEYSLY 77
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
I Q ++ + + + +S+ +
Sbjct: 78 FINGAYQAQMSKLPSEIQLETISTNDLSIADYLDD------------------------- 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
+ + LN++V + + +PK ++ + E + R I
Sbjct: 113 --------TKDIFGMLNASVNSSILKIKVPKNFVQEAPITIIHQATEANSYSTPRIHIEM 164
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D S +++E D N +V D A K+ VQ G+ G N
Sbjct: 165 DIHSQCNFVE-IFQGADDLNYNQVSVTNFTLKDGAIAKHIKVQT--EGNLAFHAGSVNAT 221
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
KR + TG+ L + + G Q D+ + +
Sbjct: 222 LKR------DANFKSFTFNTGAIKARHNLQVKLLEPGAEASVDGLYTLAGKQHCDNFSLI 275
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H A++T S + KG+ + + GKV V R A + +LL+ T P
Sbjct: 276 HHDAEHTDSSQLFKGVLDESARGVFTGKVLVDRDAQKVNSEQLNKNLLLTKKAHVDTRPQ 335
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+E H AT ++SDE FY RG+ +E A L+++ F + + K+
Sbjct: 336 LEVYADDVKCAHGATVGQMSDEEAFYLQSRGLSKERAQKLLIHAFCADAILKIED 390
>gi|213420008|ref|ZP_03353074.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 140
Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/140 (65%), Positives = 114/140 (81%)
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG +CG
Sbjct: 1 DTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCG 60
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
AHT PY+E +N+S LE EATTS+I ++ LFYCLQRGI EE AI++IVNGF ++V +LP
Sbjct: 61 AHTFPYVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELP 120
Query: 470 MEFAVEAQKLIDISLEGSVG 489
+EFAVEAQKL+ ISLE SVG
Sbjct: 121 LEFAVEAQKLLAISLEHSVG 140
>gi|330861454|emb|CBX71677.1| hypothetical protein YEW_LR49840 [Yersinia enterocolitica W22703]
Length = 604
Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 90/277 (32%), Gaps = 18/277 (6%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-----GTGQFERTLIIADEGSYVSYL 244
L ++ + +P G L + K T + L I + + +
Sbjct: 46 HLTESLSQQRLHIRLPAGKHSDKPLYLLHISSGKGSEVVNTSHYRHHLAI-EASAQAEVI 104
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E ++ A + + +NAE+ + + P
Sbjct: 105 EHF-VSLNEQPHFTGARLTISVGENAELSHCKLAFETPQSYHFAHN--------DLVLSR 155
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ G+ +T S L GE + S+ + G + D+ T + H S
Sbjct: 156 DARAKSYSFLLGAGLTRHNTSAQLNGEGATLSINSLLLPIGREICDTRTYLEHNKGYCES 215
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
R + K + + G + V + A + ++LL+ T P +E
Sbjct: 216 RQLHKTMVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVK 275
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
H AT +I E LFY RGI + A +I F
Sbjct: 276 CSHGATIGRIDAEQLFYLQSRGINQADAQQMI---FC 309
>gi|269795492|ref|YP_003314947.1| Iron-regulated ABC transporter permease protein SufD [Sanguibacter
keddieii DSM 10542]
gi|269097677|gb|ACZ22113.1| Iron-regulated ABC transporter permease protein SufD [Sanguibacter
keddieii DSM 10542]
Length = 417
Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats.
Identities = 72/349 (20%), Positives = 123/349 (35%), Gaps = 26/349 (7%)
Query: 148 FKEELKKSGVIFMPISEAICEHPDLV---KKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
F+ L GV + EA +V + L GD +V
Sbjct: 75 FETGLSSRGVR-TTVVEAPEVEVQIVPRDDERLGKAGVPGDRTAVTAWDSVSEATVVTIP 133
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
+ V +++ T L+ A S + VE+
Sbjct: 134 AQAVASE--VTSIRVEGIDDTPSASHLLVHAGALSESVVVLDHIGRATLTET-----VEV 186
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
V D A + +VQ+W G G +K+ + G + P
Sbjct: 187 VVDDGAHLTLVSVQDWSEGAVHAAS--------HRIRLGRDAKVKHIVVTFGGDVVRVTP 238
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGK 383
E E + ++ Q + + H + SR+ KG G ++ + G
Sbjct: 239 DAEFTAEGGEVEMVGLYFADADQHQEHRLFVDHAVPSCKSRVTYKGALQGAGAHTVWVGD 298
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYC 442
V + A + + +L++ + A ++P +E + H + T + DE LFY
Sbjct: 299 VLIRAEAEGTDTYELNRNLVLSDGARADSVPNLEIETGLIEGAGHASATGRFDDEQLFYL 358
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL---IDISLEGSV 488
RGIPE A L+V GF E++Q + +E +VE Q+L I+ L S+
Sbjct: 359 QARGIPEADARRLVVRGFFAELIQAIGVE-SVE-QRLLDSIEAELSKSM 405
>gi|262202311|ref|YP_003273519.1| FeS assembly protein SufD [Gordonia bronchialis DSM 43247]
gi|262085658|gb|ACY21626.1| FeS assembly protein SufD [Gordonia bronchialis DSM 43247]
Length = 393
Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/310 (18%), Positives = 108/310 (34%), Gaps = 23/310 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + FT + + + K + + G F + + + +
Sbjct: 93 DRIAAQAYSSFTQATVITVGKETQPADPIVVTVEGPGAGEVGFGHLQVRLEPFARAVVVL 152
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
VE V D A + V +W V G
Sbjct: 153 DQKGSGTYAEN-----VEFVVGDQASLTVVNVHDWADDAVH--------VAAHHLRVGRD 199
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ I + G + P E + + ++ Q ++ + H + S
Sbjct: 200 ASIRHFAISLGGNLVRLSPVVHYDAPGGDVELWGLYFADAGQHLEQRLLVDHSQPHCRSN 259
Query: 366 IVSKGISAGFS--------NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+V KG G + + + G V + A + F +L++ +N A ++P +E
Sbjct: 260 VVYKGALQGDTSGDRSREAHTVWIGDVLIRPAAEGTDTFELNRNLVLTDNARADSVPNLE 319
Query: 418 SKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVE 475
+ H + T + DE LFY RGIPE+ A L++ GF RE++ K+ + +
Sbjct: 320 IETGEIVGAGHASATGRFDDEQLFYLQARGIPEDQARRLVIRGFFREIIAKISVPDIRDR 379
Query: 476 AQKLIDISLE 485
+ I+ LE
Sbjct: 380 LEAAIEKELE 389
>gi|227542129|ref|ZP_03972178.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181958|gb|EEI62930.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51866]
Length = 389
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/311 (18%), Positives = 102/311 (32%), Gaps = 23/311 (7%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D A ++ + + + F ++ ++G+ S
Sbjct: 89 DRVAAQAWTSSTEGHIVTFAKNSTTTE-PVIITITGSGPDVTAFGNLVVEVEDGATASVQ 147
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ E + DNA + ++W + G
Sbjct: 148 IHTVGTGTLADN-----HEYLVGDNARLSVVVHEDWDDDAVHLGAEV--------AELGR 194
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + G ++ P E + ++ Q + + H N S
Sbjct: 195 DAVLRHNVALFGGSVVRLQPRVKYLAPGGDAELLGVYFADDGQFFEQRMLVDHSQPNCRS 254
Query: 365 RIVSKGISAGFSNN-------TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
++ KG G + G V + A + + +L++ A +P +E
Sbjct: 255 NVLYKGALQGDKTTRTPDARTAWIGDVLIRANAQGTDTYEANRNLVLTEGARADAVPNLE 314
Query: 418 SKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
+ S H AT + DE LFY L RGIPE A LIV+GF EV+ ++P+E E
Sbjct: 315 IETGSIVGAGHAATVGRFDDEQLFYLLSRGIPEAEARKLIVHGFFSEVIARIPVEGLRET 374
Query: 476 AQKLIDISLEG 486
+ I LEG
Sbjct: 375 LEAKITEELEG 385
>gi|227488875|ref|ZP_03919191.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51867]
gi|227091297|gb|EEI26609.1| FeS assembly protein SufD [Corynebacterium glucuronolyticum ATCC
51867]
Length = 389
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/311 (18%), Positives = 102/311 (32%), Gaps = 23/311 (7%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D A ++ + + + F ++ ++G+ S
Sbjct: 89 DRVAAQAWTSSTEGHIVTFAKNSTTTE-PVIITITGSGPDVTAFGNLVVEVEDGATASVQ 147
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ E + DNA + ++W + G
Sbjct: 148 IHTVGTGTLADN-----HEYLVGDNARLSVVVHEDWDDDAVHLGAEV--------AELGR 194
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + G ++ P E + ++ Q + + H N S
Sbjct: 195 DAVLRHNVALFGGSVVRLQPRVKYLAPGGDAELLGVYFADDGQFFEQRMLVDHSQPNCRS 254
Query: 365 RIVSKGISAGFSNN-------TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
++ KG G + G V + A + + +L++ A +P +E
Sbjct: 255 NVLYKGALQGDKTTRTPDARTAWIGDVLIRANAQGTDTYEANRNLVLTEGARADAVPNLE 314
Query: 418 SKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
+ S H AT + DE LFY L RGIPE A LIV+GF EV+ ++P+E E
Sbjct: 315 IETGSIVGAGHAATVGRFDDEQLFYLLSRGIPEAEARKLIVHGFFSEVIARIPVEGLRET 374
Query: 476 AQKLIDISLEG 486
+ I LEG
Sbjct: 375 LEAKITEELEG 385
>gi|297561904|ref|YP_003680878.1| FeS assembly protein SufD [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846352|gb|ADH68372.1| FeS assembly protein SufD [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 386
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 60/380 (15%), Positives = 137/380 (36%), Gaps = 27/380 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+++ P+ T + + D +V + + A E
Sbjct: 28 SFDVNDFPVPGGREEEWRFTPIRRLKGLHDGSAVADGTDK------LDVDVPEGATVETV 81
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
L T D A ++ + + + + +G ++ +G ++++
Sbjct: 82 GRGDARLGTAGFPADRVTAQAYTSF-EEATVITVAQGAALERPITV--NRQAQGGTRYDQ 138
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
++ + + T A V++ + A + +VQ+W
Sbjct: 139 FVLDVKPLAEAVVVLNQTGTGVR-----AGSVDIHVGEGARLTLISVQDWDGDAVD---- 189
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
V++ + + G + P +G + E + + + Q +
Sbjct: 190 ----VSQHNAQVAKDATFKSIVITLGGDLVRLSPKVAYKGRGANAELHGLYFTGDGQHHE 245
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ + H NT SR+ KG +G + + G V + G + ++ +L + ++
Sbjct: 246 HRSLIDHNMSNTRSRVEYKGALSGKDAHGVWIGDVIIGEGTTGTDSYEHNRNLQLTDDTR 305
Query: 410 AHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++P +E H A + ++ D HLFY RGIPE+ A L++ G+ E++ ++
Sbjct: 306 VDSVPNLEIFTGEVEGAGHAAASGRLDDIHLFYLRSRGIPEDEARRLVIRGYFLELINRI 365
Query: 469 PMEFAVEAQKLIDISLEGSV 488
P+E E ++ I +E +
Sbjct: 366 PVE---ELREEIMAKVERKL 382
>gi|289705462|ref|ZP_06501854.1| FeS assembly protein SufD [Micrococcus luteus SK58]
gi|289557691|gb|EFD50990.1| FeS assembly protein SufD [Micrococcus luteus SK58]
Length = 412
Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 112/314 (35%), Gaps = 20/314 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ +V+ D AA ++V + + +
Sbjct: 111 DARVGSVLTPDDRVSAAAWNSVSEATVVT---ISGEVAEPVRIDVVGSSADPAAM-HLTV 166
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ +E + + + A VE +A + +Q W
Sbjct: 167 LVEENAQADVV-----IAHRGTAVLAQNVEFDVRRDARLNVVALQAWEGDAVH------- 214
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V+ + + + G + P+ E+ E Y + ++ Q +++
Sbjct: 215 -VSAQQASVATNAHFKHVAVSYGGGVVRLTPTARFAAERGEAEMYGLYFADAGQHLENRL 273
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H + S ++ KG G + + G V + + A + + + +LL+ + A +
Sbjct: 274 FVDHNQPDCVSNVLYKGALQGTDARTVWVGDVLIRKEAEGTDTYEKNQNLLLSDGARADS 333
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM- 470
+P +E + H + T + + LFY + RGI E A LIV GF+ E++QK+ +
Sbjct: 334 VPNLEIETGVIEGAGHASATGRFDETQLFYLMARGISETEARRLIVRGFLNEIIQKIGIG 393
Query: 471 EFAVEAQKLIDISL 484
+ E +++ L
Sbjct: 394 DVEDELTAVMEDEL 407
>gi|118589099|ref|ZP_01546506.1| FeS assembly protein SufD [Stappia aggregata IAM 12614]
gi|118438428|gb|EAV45062.1| FeS assembly protein SufD [Stappia aggregata IAM 12614]
Length = 439
Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/411 (18%), Positives = 138/411 (33%), Gaps = 28/411 (6%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + P R + DL Y + + + + L+ T + G
Sbjct: 36 LREAALGQIRDRGLP---HRRVEEYKYSDLRAYMKSAAPLAGAADEAAARSLIETQDGFG 92
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
R + ++A D E L GV ++EA+
Sbjct: 93 DLDRYRIVVANGSYLAALSDV------------EALASEGVTLTSVAEALAGEMGTKLVA 140
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
P + ALN+A G + + GV + KG Q R +
Sbjct: 141 APKTGPS--DGVIALNTAFLQGGVVITVKSGVEVSKPVELVQVATAKG-AQSVRNRVELG 197
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + LE T V + D + + + + +Q I
Sbjct: 198 EGAKLRLLE--TFVGDTGEGELNTVFDYELADKSALAATRLIVSKTDAAQLFTTI----- 250
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G +++ G + GE S + Y + ++ G D +
Sbjct: 251 ---ATIGAEAELKSLGFIAGPQFSRNQQFINFTGENSEAKIYGVTMAGGKSLADQTLIVD 307
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H + SR K + G + Y+G+++V + A + +LL+ + P +
Sbjct: 308 HAVPHCNSREFFKTVLDGEAKGVYQGRINVAQHAQKTDGEMMTQALLLSEDAEMANKPEL 367
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
E H AT+ +I ++ LFY RGIPE+ A L+V F+ E +++
Sbjct: 368 EIFADDVLCAHGATSGQIDEDLLFYLRARGIPEDEAKTLLVLAFLSEAIEE 418
>gi|163759513|ref|ZP_02166598.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
gi|162283110|gb|EDQ33396.1| putative iron-sulfur cluster assembly protein [Hoeflea
phototrophica DFL-43]
Length = 424
Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 12/302 (3%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ LN A +DG + + + + R + GS +
Sbjct: 130 SDDLIGQLNGAFVSDGYTIAVAADASIDKLVELQSVQSGGQA--HNRFVASFGTGSKATL 187
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+E + + ++V L D A++ + VQ D + G
Sbjct: 188 VERHLG-DDEHSGFSSSVSTLDVADGADVTWVIVQQRGASDQHLG--------QLSARLG 238
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+K+ + G +T + + GE + + ++ + G D + H NTT
Sbjct: 239 TGAKLRLFVINAGGKLTRQEVHVDVAGEDAHFDLRTVNLLAGDSHTDVTLTLGHNVANTT 298
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S + + + + ++G++ V + A + C++LL+ ++ P +E
Sbjct: 299 SSEIVRNVVLDRARGVFQGQICVAQEAQKTDAQMACNTLLLSDDGEFSAKPELEIFADDV 358
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDI 482
H AT + ++HLFY + RGI E+AA L+VNGFV E++++L E VE + +I+
Sbjct: 359 ICAHGATVIDLDEDHLFYLMARGITEKAARGLLVNGFVDELVEELDNEELVEVLETVIEQ 418
Query: 483 SL 484
L
Sbjct: 419 WL 420
>gi|194364776|ref|YP_002027386.1| FeS assembly protein SufD [Stenotrophomonas maltophilia R551-3]
gi|194347580|gb|ACF50703.1| FeS assembly protein SufD [Stenotrophomonas maltophilia R551-3]
Length = 420
Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats.
Identities = 84/431 (19%), Positives = 158/431 (36%), Gaps = 34/431 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P R A + L P +D LL
Sbjct: 16 DARREVLDAALRDGLP---AARNEAWKYTSLRQLERRAFAAAPLQGPALDVALLEDI--- 69
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
V V+ D+ + +GV P+S A+ + D V+
Sbjct: 70 ------------PAPRLVFVNGRLDAALSDV----QALPAGVQLQPLSAALADGEDAVR- 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
+L + +A LN+A+ +G + + +GV+ L F T R LI
Sbjct: 113 FLGRRYERSEEIFARLNAALADEGVVLRVDEGVQVEAPLQLVFASVAGDTDLAWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L V+ +A ++++ VQ G +
Sbjct: 173 ELRAGAQLGVVEH-RFSVGDAAHLDNTVLHAHVARDAVLQHARVQ-------AGSARQTS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
F+ + ++ LE G+A++ + L G+ + + + NG + +++
Sbjct: 225 FL-RTDAVLARDAQYHRVDLELGAALSRHELNVRLEGDNAHLTANGVLLGNGRRHVETRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T ++ +G++A S + G + + GA + +LL+ + T
Sbjct: 284 GIDHIARDTNCELLWRGVAANRSRVVFHGGIQIREGADGTDANLSNKNLLLSPDAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ LFY RG+P+ A AL+ F E L+ LP
Sbjct: 344 PTLVIDADEVKAAHGATVGQLDANALFYLRTRGLPQAQAQALLSAAFCHEPLKVLPDALR 403
Query: 474 VEAQKLIDISL 484
+ + +D +L
Sbjct: 404 SQLARRLDKAL 414
>gi|319947899|ref|ZP_08022084.1| hypothetical protein ES5_01176 [Dietzia cinnamea P4]
gi|319438442|gb|EFV93377.1| hypothetical protein ES5_01176 [Dietzia cinnamea P4]
Length = 402
Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 118/311 (37%), Gaps = 22/311 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + + S + + K V + +G + T + + + +++
Sbjct: 103 DRVAAQAFSSAAEASVITVAKEVVLDEPVYVTVDGPGEGQLAYGHTQVRLEPFANATFVV 162
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
VE + D+A ++ +Q+W G G
Sbjct: 163 DQRGGGTIAEN-----VEFIVGDSAHLEVVLIQDWDDDALHMAG--------HHLQVGRD 209
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ +++T + G + P + ++ Q ++ + H N TSR
Sbjct: 210 ATLTYTTVTFGGEVVRISPFARFTAPGGTVTLNGLYYADDGQHLEHRLLVDHSVPNCTSR 269
Query: 366 IVSKGISAGFS-------NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
I+ KG G + + + G V + A + + +L++ + A ++P +E
Sbjct: 270 ILYKGALQGDASSNLPDAHTVWIGDVLIRAAALGTDTYEMNRNLVLTDGARADSVPNLEI 329
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H + + +EHLFY + RGIPE+ A L+V GF EV+ ++ + E
Sbjct: 330 ETGEIAGAGHASAVGRFDEEHLFYLMSRGIPEDVARRLVVRGFFGEVINRIGVPEVRERV 389
Query: 477 QKLIDISLEGS 487
+ +++ L+ S
Sbjct: 390 TEAVELELQSS 400
>gi|281413857|ref|ZP_06245599.1| Iron-regulated ABC transporter permease protein SufD [Micrococcus
luteus NCTC 2665]
Length = 329
Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/320 (16%), Positives = 114/320 (35%), Gaps = 20/320 (6%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E + +V+ D AA ++V + +
Sbjct: 22 ETVARADARVGSVLTPDDRVSAAAWNSVSEATVVT---ISGEVAEPVRIDVVGSSADPAA 78
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
++ +E + + + A VE +A + +Q W
Sbjct: 79 M-HLTVLVEENAQADVV-----IAHRGTAVLAQNVEFDVRRDARLNVVALQAWEGDAVH- 131
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
V+ + + + G + P+ E+ E Y + ++ Q
Sbjct: 132 -------VSAQQASVATNAHFKHVAVSYGGGVVRLTPTARFAAERGEAEMYGLYFADAGQ 184
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+++ + H + S ++ KG G + + G V + + A + + + +LL+ +
Sbjct: 185 HLENRLFVDHNQPDCVSNVLYKGALQGTDARTVWVGDVLIRKEAEGTDTYEKNQNLLLSD 244
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A ++P +E + H + T + + LFY + RGIPE A LIV GF+ E++
Sbjct: 245 GARADSVPNLEIETGVIEGAGHASATGRFDETQLFYLMARGIPETEARRLIVRGFLNEII 304
Query: 466 QKLPM-EFAVEAQKLIDISL 484
QK+ + + E +++ L
Sbjct: 305 QKIGVGDVEDELTAVMEDEL 324
>gi|239917652|ref|YP_002957210.1| Iron-regulated ABC transporter permease protein SufD [Micrococcus
luteus NCTC 2665]
gi|239838859|gb|ACS30656.1| Iron-regulated ABC transporter permease protein SufD [Micrococcus
luteus NCTC 2665]
Length = 412
Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/320 (16%), Positives = 114/320 (35%), Gaps = 20/320 (6%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
E + +V+ D AA ++V + +
Sbjct: 105 ETVARADARVGSVLTPDDRVSAAAWNSVSEATVVT---ISGEVAEPVRIDVVGSSADPAA 161
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
++ +E + + + A VE +A + +Q W
Sbjct: 162 M-HLTVLVEENAQADVV-----IAHRGTAVLAQNVEFDVRRDARLNVVALQAWEGDAVH- 214
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
V+ + + + G + P+ E+ E Y + ++ Q
Sbjct: 215 -------VSAQQASVATNAHFKHVAVSYGGGVVRLTPTARFAAERGEAEMYGLYFADAGQ 267
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+++ + H + S ++ KG G + + G V + + A + + + +LL+ +
Sbjct: 268 HLENRLFVDHNQPDCVSNVLYKGALQGTDARTVWVGDVLIRKEAEGTDTYEKNQNLLLSD 327
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A ++P +E + H + T + + LFY + RGIPE A LIV GF+ E++
Sbjct: 328 GARADSVPNLEIETGVIEGAGHASATGRFDETQLFYLMARGIPETEARRLIVRGFLNEII 387
Query: 466 QKLPM-EFAVEAQKLIDISL 484
QK+ + + E +++ L
Sbjct: 388 QKIGVGDVEDELTAVMEDEL 407
>gi|194334017|ref|YP_002015877.1| SufBD protein [Prosthecochloris aestuarii DSM 271]
gi|194311835|gb|ACF46230.1| SufBD protein [Prosthecochloris aestuarii DSM 271]
Length = 384
Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats.
Identities = 90/380 (23%), Positives = 155/380 (40%), Gaps = 14/380 (3%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ +L ++ +AG ++ A F + F + GV +PI A+
Sbjct: 18 VEDLTRLDNNEKKSMRMAGFDANEQNRSASFVQIDHNHAFCKSY-DPGVEILPIGLAMK- 75
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+ + Y ++ G + + + S G + + KG R + + ++ + GQ
Sbjct: 76 IHEGLADYQWKLLKPGKDEFTRMASDNPHGGYVIRVKKGARLNNPIQSCLMMHAEDVGQN 135
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+II +EG+ L GCT Q D++ H + E NA + ++ V NW
Sbjct: 136 VHNIIIIEEGAEAHILSGCTTSQADQSAAHIGISEYYIEKNARLTFTMVHNWGEHVEVRP 195
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
G+ +S YPS ++G S F SI ++
Sbjct: 196 RSA-------GEVDAGGVFLSNYISLKPVKNLQMYPSVAMKGAGSVSRFNSIIVATEGSF 248
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D G K++ A T + I+S I++G + RG + A S+ +C LL+ N
Sbjct: 249 MDVGNKVILDAPETRTEIISHAIASGG-HIIARG--HIQANCAPSKGHLECQGLLL-KNG 304
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
IP ++ + L HEA K++ E L Y + RG+ E+AA + I+ GF+ + L
Sbjct: 305 IIQAIPELDGRAEGVELSHEAAVGKLAKEELEYLMIRGLDEQAAGSAIIRGFLNIDIMGL 364
Query: 469 PMEFAVEAQKLIDISLEGSV 488
P E E K I E S+
Sbjct: 365 PSELQSEIDKAIA-ETEKSM 383
>gi|258652487|ref|YP_003201643.1| FeS assembly protein SufD [Nakamurella multipartita DSM 44233]
gi|258555712|gb|ACV78654.1| FeS assembly protein SufD [Nakamurella multipartita DSM 44233]
Length = 405
Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats.
Identities = 59/305 (19%), Positives = 105/305 (34%), Gaps = 17/305 (5%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D A A + +P L F ++ +
Sbjct: 110 PTDRPSARAWQA-SESILLIDVPAQTEFREPLIVTFAGGTVDRAFAGHLIVRVGAHAKAQ 168
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
A + QL + +E+V D A++++ ++ W
Sbjct: 169 V-----AILHEGTQLLSDNMEIVVGDGAQLEFVALEEWDSQAVHLSH--------HHIRV 215
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + + T L G + + G E + ++ Q ++ + H +
Sbjct: 216 GRDATVKHTALTFGGDLVRVVADVVYDGPGGDVELNGVYFADAGQHLEHRLFVDHAVPHC 275
Query: 363 TSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
SR + KG + + G V + R A + + +L++ A ++P +E +
Sbjct: 276 KSRALYKGALQGDKARTVWIGDVLIRRAAEGTDTYELNRNLVLTEGARADSVPNLEIETG 335
Query: 422 S-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-EAQKL 479
H + T + DE LFY L RGIP E A L+V GF EVL K+ +E +
Sbjct: 336 EIVGAGHASATGRFDDEQLFYLLSRGIPAEVAKRLVVRGFFGEVLLKIGIESVRARTADI 395
Query: 480 IDISL 484
I+ L
Sbjct: 396 IEREL 400
>gi|190573179|ref|YP_001971024.1| hypothetical protein Smlt1154 [Stenotrophomonas maltophilia K279a]
gi|190011101|emb|CAQ44710.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 420
Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats.
Identities = 86/431 (19%), Positives = 158/431 (36%), Gaps = 34/431 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P R A + L P +D LL
Sbjct: 16 DARREVLDAALRDGLP---AARNEAWKYTSLRQLERRAFAAAPLQGPALDAALLEDIPA- 71
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
L V A + S+ +GV P+S A+ D V+
Sbjct: 72 -------PRLVFVNGRLDAALSDVQSLP-----------AGVQLQPLSAALASGEDAVR- 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
+L + +A LN+A+ +G + + +GV+ L F T R LI
Sbjct: 113 FLGRRYERSEEIFARLNAALADEGVVLRVEEGVQVEAPLQLVFASVAGETDLAWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L V+ +A +K++ VQ G +
Sbjct: 173 ELRAGASLGVVEH-RFSVGDSAHLDNTVLHAHVARDAVLKHARVQ-------AGSARQTS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
F+ + ++ LE G+A++ + L G+ + + + NG + +++
Sbjct: 225 FL-RTDAVLARDAQYHRVDLELGAALSRHELNVRLEGDSAQLTANGVLLGNGRRHVETRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T+ ++ +G++A S + G + + GA + +LL+ + T
Sbjct: 284 GIDHIARDTSCELLWRGVAANRSRVVFHGGIQIREGADGTDANLSNKNLLLSADAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ LFY RG+P+ A AL+ F E L+ LP
Sbjct: 344 PTLVIDADEVKAAHGATVGQLDANALFYLRSRGLPQAQAQALLSAAFCHEPLKILPEALR 403
Query: 474 VEAQKLIDISL 484
+ + +D +L
Sbjct: 404 EQLARRLDKAL 414
>gi|269126459|ref|YP_003299829.1| FeS assembly protein SufD [Thermomonospora curvata DSM 43183]
gi|268311417|gb|ACY97791.1| FeS assembly protein SufD [Thermomonospora curvata DSM 43183]
Length = 373
Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats.
Identities = 58/335 (17%), Positives = 118/335 (35%), Gaps = 17/335 (5%)
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
+ V+ E E L D A S+ T+ + + +PK
Sbjct: 52 EVDVVIEAAPEVKVERVGRDDPRLGGAYAPTDRVSAQAYSSF-TEATVLTVPKEAVASQP 110
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ + T ++ + + + + T + VE V D A++
Sbjct: 111 TVLRITGRDAAQAAYGHTTVVVEPFAQATVVLAHTGSATYADN-----VEFVVGDGAKLS 165
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+VQ+W + G + + + G + PS
Sbjct: 166 VISVQDWADDAVHLSH--------QHARLGRDASFTGFAVSLGGDLLRIAPSVAYTAPGG 217
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAH 392
E Y + + Q I+ + H + SR+ +G G + + G V +
Sbjct: 218 DAELYGVYFVDAGQHIEHRLLVDHAVPHCRSRVDYRGALQGQDAHAVWIGDVIIRAEGEG 277
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEA 451
+ + +L++ + ++P +E H + + ++ DEHLFY RGI +E
Sbjct: 278 TDTYELNRNLVLTDGTRVDSVPNLEILTGEVVGAGHASASGRLDDEHLFYLQARGISKED 337
Query: 452 AIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
A ++V GF+ ++++++ + E Q I+ LE
Sbjct: 338 ARRMVVLGFLGQLVERIEVPEIREKVQAAIEAELE 372
>gi|54025529|ref|YP_119771.1| hypothetical protein nfa35590 [Nocardia farcinica IFM 10152]
gi|54017037|dbj|BAD58407.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 399
Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats.
Identities = 67/327 (20%), Positives = 114/327 (34%), Gaps = 22/327 (6%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V P+ I E D + L V + AA + F + V + K V +
Sbjct: 72 VEVTPVDGVITETVDRTDERLG-AAGVPADRVAAQAYSGFETATIVSVGKEVELGQPVVV 130
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
G + LI + + + VE V D+A++
Sbjct: 131 TITGPGAGRTAYGHLLIRVGAFAVATVVIDQRGGGTYAEN-----VEFVVGDSAKLTVVA 185
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
VQ+W T G + + T + G + + G E
Sbjct: 186 VQDWDDDAVH--------ATAHHARLGRDATLRHTAVTLGGDLVRLTGTVKYDGPGGDAE 237
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS-------AGFSNNTYRGKVSVHRG 389
+ ++ Q + + H N S ++ KG G + + G V +
Sbjct: 238 LLGLYFADAGQHFEQRLLVDHAVPNCKSNVLYKGALQGDPASPKGDARTVWVGDVLIRAA 297
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIP 448
A + F +L++ + A ++P +E + H + T + DE LFY RGIP
Sbjct: 298 AEGTDTFELNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIP 357
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVE 475
E+AA L+V GF E++QK+ + E
Sbjct: 358 EDAARRLVVRGFFHEIIQKITVPQVRE 384
>gi|289705317|ref|ZP_06501714.1| FeS assembly protein SufD [Micrococcus luteus SK58]
gi|289557952|gb|EFD51246.1| FeS assembly protein SufD [Micrococcus luteus SK58]
Length = 412
Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats.
Identities = 51/314 (16%), Positives = 111/314 (35%), Gaps = 20/314 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ +V+ D AA ++V + + +
Sbjct: 111 DARVGSVLTPDDRVSAAAWNSVSEATVVT---ISGEVAEPVRIDVVGSSADPAAM-HLTV 166
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ +E + + + A VE +A + +Q W
Sbjct: 167 LVEENAQADVV-----IAHRGTAVLAQNVEFDVRRDARLNVVALQAWEGDAVH------- 214
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V+ + + + G + P+ E+ E + ++ Q +++
Sbjct: 215 -VSAQQASVATNAHFKHVAVSYGGGVVRLTPTARFAAERGEAEMCGLYFADAGQHLENRL 273
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H + S ++ KG G + + G V + + A + + + +LL+ + A +
Sbjct: 274 FVDHNQPDCVSNVLYKGALQGTDARTVWVGDVLIRKEAEGTDTYEKNQNLLLSDGARADS 333
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM- 470
+P +E + H + T + + LFY + RGI E A LIV GF+ E++QK+ +
Sbjct: 334 VPNLEIETGVIEGAGHASATGRFDETQLFYLMARGISETEARRLIVRGFLNEIIQKIGIG 393
Query: 471 EFAVEAQKLIDISL 484
+ E +++ L
Sbjct: 394 DVEDELTAVMEDEL 407
>gi|172040688|ref|YP_001800402.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
gi|171851992|emb|CAQ04968.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium urealyticum DSM
7109]
Length = 405
Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats.
Identities = 59/324 (18%), Positives = 113/324 (34%), Gaps = 31/324 (9%)
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
PV A +A D +V + K + + + ++ + +
Sbjct: 96 APVDRAAAQAWENAPVAD--YVQVAKDTALTEPIEITITGPGQDQVSYSTLVVELERHAE 153
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+ + + H+ VE V D A++ +++W
Sbjct: 154 AVVILR-----YEGSGAHSDNVEFVVGDGAKLVTVVLEDWEDDGVHLSNS--------HI 200
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
G + + G I P E + ++ Q + + H +
Sbjct: 201 QAGRDATVRHAYAAFGGEILRSVPHVRYTAPGGDVEMLGVNFADANQYFEQRLLIDHSVQ 260
Query: 361 NTTSRIVSKGISAGF--------------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
N S ++ KG G + + G V + A + + ++LL+
Sbjct: 261 NCRSNVLYKGALQGDPADADRPASERKRDARTVWIGDVLIRPEATGTDTYETNNNLLLTT 320
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A ++P +E + H AT + DE ++Y RGIPE A LIV GF +V+
Sbjct: 321 GARADSVPNLEIQTGEIAGAGHAATVGRFDDEQMYYLQARGIPEAQAKMLIVRGFFTDVI 380
Query: 466 QKLPMEFAVE-AQKLIDISLEGSV 488
+++P+E E ++L+ LE +V
Sbjct: 381 RRIPVESVREHLEELVGNELERTV 404
>gi|227494628|ref|ZP_03924944.1| FeS assembly protein SufD [Actinomyces coleocanis DSM 15436]
gi|226831810|gb|EEH64193.1| FeS assembly protein SufD [Actinomyces coleocanis DSM 15436]
Length = 396
Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats.
Identities = 65/332 (19%), Positives = 120/332 (36%), Gaps = 18/332 (5%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V EA E + L V+ D + + F+ IP+ +
Sbjct: 70 VEVTLSDEATYEVVPATDERLDPVLAPVDRTAVVSWN-QAQEVHFIDIPRHGEVNEPIFI 128
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ Q +R + A + S+ + T VE+ A D+A+I + +
Sbjct: 129 -KVNGDATENQAQRIYVRAGQNSHAVVVLSHTGKANL-----NQTVEVNAADDAQITFVS 182
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+Q W + G +K+ + G ++ E+ E
Sbjct: 183 LQEWDDTATHASN--------HRLRAGKNTKLRHIVVTLGGSLVRLSADTEFSAERGHIE 234
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRN 395
+ + Q + + H N SR+ KG G +++ + G + A +
Sbjct: 235 MLGLYFVDKGQHFEHRPYIAHTEPNCYSRVTYKGALQGEGAHSVWVGDCLIGERADGTDT 294
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L++ ++P +E +N H + T + DE LFY + RGI E A
Sbjct: 295 YELNRNLVLTEGTLTDSVPNLEIENGEIEGAGHASATGRFDDEQLFYLMARGIREADARR 354
Query: 455 LIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
L+V GF E++ ++ + E +LID LE
Sbjct: 355 LVVRGFFAELINEIGIPAVQEHLMELIDAELE 386
>gi|227822093|ref|YP_002826064.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Sinorhizobium fredii NGR234]
gi|227341093|gb|ACP25311.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Sinorhizobium fredii NGR234]
Length = 425
Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats.
Identities = 78/422 (18%), Positives = 148/422 (35%), Gaps = 46/422 (10%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
T P+ R + + DL P + D ++ L + E ++
Sbjct: 45 KTAGLPT---RRVESWHYTDLRTLLRAVPSADPSAFADRVEPIVAGATVLSVRNGEADL- 100
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ GV +E++ + + V D
Sbjct: 101 -------------------------KSLPEGVTARSYTESLIDGSAV----AGLAVLGSD 131
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ +N + G + + +GV L + R + GS + LE
Sbjct: 132 DAIGRINGGLVRGGLEIAVAEGVELEAPLEIQVAQSHGQA--HTRFPVSFGAGSKATVLE 189
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ D + + ++V ++ + A++ + +Q P D+ +
Sbjct: 190 RHLSTNGDASFV-SSVSDVTLAEGADVIWIILQQQGPADTHLG--------QIRFDLAKD 240
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+K+ + G + + GE + I + G D + H +TTS
Sbjct: 241 AKLHVFVINAGGKLVRQELHGRASGEGADLTLRGINLLGGESHTDVTFTLSHDVPHTTSS 300
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ + + + ++GK+ V + A + C++LL+ ++ P +E
Sbjct: 301 EIIRNVVFDRAKGVFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQC 360
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL-PMEFAVEAQK-LIDIS 483
H AT I LFY L RGIPE A A++VN FV E++++L E VEA + +I
Sbjct: 361 GHGATVIDIDHTQLFYLLSRGIPENKARAMLVNAFVAEIVEELEDDEALVEALEGVISTW 420
Query: 484 LE 485
LE
Sbjct: 421 LE 422
>gi|262283281|ref|ZP_06061047.1| FeS assembly protein SufD [Streptococcus sp. 2_1_36FAA]
gi|262260772|gb|EEY79472.1| FeS assembly protein SufD [Streptococcus sp. 2_1_36FAA]
Length = 250
Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 10/255 (3%)
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+IIA + S V+YLE VE++A A+IK+S +
Sbjct: 1 MIIAGKHSKVNYLERLETYGEGAVPATANITVEVIAQAGAQIKFSAIDRLG-------QN 53
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ ++++RG + I W L G+ S + +A+S+G Q
Sbjct: 54 VTAYISRRGKLDND-AMIDWAIGVMNEGNVVADFDSDLYGKGSHADMKVVALSSGKQVQG 112
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T++ + N+ I+ G+ T+ G + +GA + + L++ + +
Sbjct: 113 IDTRVTNYGCNSIGNILQHGVILEKGTLTFNGIGHIIKGAKGADAQQESRVLMLSDQARS 172
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
P + + H A+ ++ E ++Y + RG+ + A L+V GF+ V+ ++P+
Sbjct: 173 DANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPV 232
Query: 471 -EFAVEAQKLIDISL 484
E E + IDI L
Sbjct: 233 KEVRDEMIENIDIIL 247
>gi|325963207|ref|YP_004241113.1| Iron-regulated ABC transporter permease SufD [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469294|gb|ADX72979.1| Iron-regulated ABC transporter permease protein SufD [Arthrobacter
phenanthrenivorans Sphe3]
Length = 428
Score = 189 bits (481), Expect = 6e-46, Method: Composition-based stats.
Identities = 64/331 (19%), Positives = 122/331 (36%), Gaps = 18/331 (5%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V+ E E K + T D A IP E+S
Sbjct: 108 VVVTGPEEVTVESVGRDDKRIGTAGIPEDRVSANAWENFAGATVVT-IPSEFEALTEISV 166
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+ +I+A++ S + + + VE++ D A + T
Sbjct: 167 D-IEGTSLDAAAQHLVIVAEKFSRAVVVLNHRGSA-----VVSENVEIIVEDGANLTVIT 220
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+Q W + G +K+ + G + PS E
Sbjct: 221 LQEWNDDAVHASS--------QQAKIGRDAKLKHVMVSLGGDLVRVTPSARFTAPGGEAE 272
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRN 395
+ + ++ Q ++ + H N S ++ KG G + + + G V + + A +
Sbjct: 273 MFGLYFADAGQHLEQRLFVDHAVPNCKSNVLYKGALQGRNAHAVWVGDVLIRKEAEGTDT 332
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +LL+ + A ++P +E + H + T ++ DEHLFY + RGIPE+ A
Sbjct: 333 YEANRNLLLTDGARADSVPNLEIETGLIEGAGHASATGRMDDEHLFYLMARGIPEDVARR 392
Query: 455 LIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
L+V GF+ E++Q++ + E + ++ L
Sbjct: 393 LVVRGFLNEIIQQIKVPSIEERLTEAVEHEL 423
>gi|296129518|ref|YP_003636768.1| FeS assembly protein SufD [Cellulomonas flavigena DSM 20109]
gi|296021333|gb|ADG74569.1| FeS assembly protein SufD [Cellulomonas flavigena DSM 20109]
Length = 434
Score = 189 bits (481), Expect = 7e-46, Method: Composition-based stats.
Identities = 75/396 (18%), Positives = 128/396 (32%), Gaps = 24/396 (6%)
Query: 104 VDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
V PE R + + + G + + L GV+ +
Sbjct: 32 VVPEASRAARPTSFDVADFPVPTGREEEWRFAPVDRFAGLFAAASDGVLPMGGVLTTVVE 91
Query: 164 --EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
E E D L T GD A ++ + V + +
Sbjct: 92 SPEVRVEIVDRDDARLGTAGRPGDRAAAVAWASFERATVVTLPRESVSSKVTSVVVEGVE 151
Query: 222 EKGTGQFE------RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
G L+ A+ S + VE+VA D A +
Sbjct: 152 GAGLAGAPLEPTAAHLLVHAEPLSQGVVVIDHVGHANLTET-----VEVVAEDGAHLTVV 206
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+VQ+W G G + + + G + P GE +
Sbjct: 207 SVQDWASGSVHAAS--------HRLRIGRDATVKHIVVTLGGDVVRVTPDTEFVGEGASV 258
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSR 394
+ ++ Q + + H N SR+ KG G ++ + G V + A +
Sbjct: 259 TALGLYFADADQHQEHRLFVDHAVPNCVSRVTYKGALQGQGAHTVWVGDVLIRAAAEGTD 318
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ +L++ + A ++P +E + H + T + DE LFY RGIPE A
Sbjct: 319 TYELNRNLVLTDGARADSVPNLEIETGVIEGAGHASATGRFDDEQLFYLRSRGIPETDAR 378
Query: 454 ALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSV 488
L+V GF E+L ++ + E I+ LE S+
Sbjct: 379 RLVVRGFFAELLHEIGVPEVEERLIASIEAELEKSM 414
>gi|284031208|ref|YP_003381139.1| FeS assembly protein SufD [Kribbella flavida DSM 17836]
gi|283810501|gb|ADB32340.1| FeS assembly protein SufD [Kribbella flavida DSM 17836]
Length = 396
Score = 189 bits (481), Expect = 7e-46, Method: Composition-based stats.
Identities = 60/317 (18%), Positives = 112/317 (35%), Gaps = 19/317 (5%)
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ V D A A + V IP + G F
Sbjct: 84 ETVAADSVQAGKPQDRIAAVAW-AHAPETFAVRIPADAELTDPVHVNVAGL--GARGFAH 140
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
++ + S + + T A+ VE+V D +E++ T+Q
Sbjct: 141 LVVESGRHSRATVVIDHTGAGEL-----ASNVEIVVGDGSELRVVTIQQGDAESIH---- 191
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
V + G +K+ + G + + G E + + Q +
Sbjct: 192 ----VAQHDAQVGRDAKLRHVAVTLGGKVVRVSTNVRYAGPGGDAELLGVYFAESGQHHE 247
Query: 351 SGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H A + S ++ KG A + + G V + A + F +L++ +
Sbjct: 248 HRLFVDHEATHCKSNVLYKGALAGDDARAVWIGDVLIRAAAEGTETFELNRNLVLTDGAR 307
Query: 410 AHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A ++P +E + H + T + DE LFY RGIPE+ A L+V+GF +++ ++
Sbjct: 308 ADSVPNLEIETGEIEGAGHASATGRFDDEQLFYLQARGIPEDEARRLVVSGFFNDIIGRI 367
Query: 469 PMEFAVE-AQKLIDISL 484
+ E +I+ L
Sbjct: 368 GVAEVTEHLHAVIEQKL 384
>gi|319405705|emb|CBI79328.1| ABC-type transport system [Bartonella sp. AR 15-3]
Length = 422
Score = 189 bits (481), Expect = 7e-46, Method: Composition-based stats.
Identities = 71/432 (16%), Positives = 153/432 (35%), Gaps = 47/432 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + + PS + + +L S + +D + + T I
Sbjct: 37 RKKAIELFQKTRLPS---RKMEYWHYTNLRVLLKSVS----NFSELIDEQQINTLLPENI 89
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ A GV ++ A+ ++ + +
Sbjct: 90 VFSIKNGKALTSNKIA----------------------GVEVEHLATALDKNSTKINLTV 127
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+NF +N+A TDG I +R + + + F I +
Sbjct: 128 -----ADENFIGQVNTAFVTDGWIFQIADNIRLDIPIELQNIQMGGQSHTFSS--IKVGK 180
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S +E D++ ++V L N+ + + + S F +
Sbjct: 181 NSQAVIIER--QIGNDKDTFVSSVFSLNLAANSNVTWILI-------SDRGCNTTQFG-Q 230
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
++++ + S + + L G++S + +I + +G D + H
Sbjct: 231 FHAVLAENAELTLYVINISSQLNRQEIDIELLGKKSNFQLRAINLLSGKTHNDLTMTVRH 290
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ + + SR + + + ++ ++G + V + A + C+SL++ ++ P +E
Sbjct: 291 IEEKSVSREIVRNVVTDKAHGVFQGVIRVAQKAQETDARMACNSLILSDDAEFDIKPELE 350
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP-MEFAVEA 476
+ H AT +K++ +HLFY + RGI + A L+V GF+ E++ +
Sbjct: 351 IFADNVTCAHGATVAKLNHDHLFYLMARGISFKTACELLVKGFISELIDDIKQDNIHAIL 410
Query: 477 QKLIDISLEGSV 488
+I LE +V
Sbjct: 411 SNIISKWLEKNV 422
>gi|229820826|ref|YP_002882352.1| FeS assembly protein SufD [Beutenbergia cavernae DSM 12333]
gi|229566739|gb|ACQ80590.1| FeS assembly protein SufD [Beutenbergia cavernae DSM 12333]
Length = 399
Score = 189 bits (481), Expect = 7e-46, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 114/326 (34%), Gaps = 20/326 (6%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR---INEKG 224
E D L GD AA +P E + R E
Sbjct: 86 EIVDHHDSRLGVAGAPGDRIAAAAWEGFREATVVT-VPANHVAETETTIALRGASSREDV 144
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
+ +IA+ S + T VE+V D A++ +VQ+W G
Sbjct: 145 SPSAAHVTVIAETFSEAVVVLDHTGGAELAQT-----VEIVVHDGAKLTLVSVQDWDAGA 199
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
V G + + + G + P G E + ++
Sbjct: 200 VH--------VASHRASVGRDASLKHIVVTLGGDVVRLTPDAAFTGTGGNVEMLGLYYAD 251
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q + + H + TSR+ KG + + + G V + + A + + +L+
Sbjct: 252 AGQHQEHRLFVDHAQPHCTSRVTYKGALQGDGARSVWVGDVLIRKEAEGTDTYELNRNLV 311
Query: 404 IGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ + A ++P +E + H + T + DE LFY RGIPE A L+V GF
Sbjct: 312 LTDGARADSVPNLEIETGEIEGAGHASATGRFDDEQLFYLKSRGIPEATARRLVVRGFFA 371
Query: 463 EVLQKLPMEFAVE-AQKLIDISLEGS 487
E++Q++ + E I++ L +
Sbjct: 372 ELIQQIGVPSIEERLIAAIEVELSHT 397
>gi|90407346|ref|ZP_01215531.1| hypothetical protein PCNPT3_03892 [Psychromonas sp. CNPT3]
gi|90311497|gb|EAS39597.1| hypothetical protein PCNPT3_03892 [Psychromonas sp. CNPT3]
Length = 410
Score = 189 bits (480), Expect = 9e-46, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 97/286 (33%), Gaps = 10/286 (3%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
+ +N + + + +PK L N +G + + G+
Sbjct: 112 NSEIFQLINESFSVNAQQIRLPKNKIETKPLLLLHINNAQGKMTHSYHQLSIESGAQGVV 171
Query: 244 LEGCTAPQRDENQLHAAV-VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+E E DNA + + V ++
Sbjct: 172 IEQFVNLDSFETAQFNGARCVFNIADNASLDHYKV-CVQENSYHFSHNDFHL-------- 222
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +K+ + + S L+GE S +S+++ G Q DS T + H A
Sbjct: 223 GRDTKVRSLCFLLSGDLIRHHTSSRLKGENSHLSMHSLSLPKGKQTYDSRTYLEHQATYC 282
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S + K I + + G + V + A + Q +LL+ + C ++ P +E
Sbjct: 283 QSLQIHKFIVQDQAVGVFNGMIKVAKDAIKTDAQMQDHNLLLSDTCQINSKPQLEIYADD 342
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H TT ++ E +FY RGI ++ A ++ F + +
Sbjct: 343 VKCSHGCTTGTLNKEQIFYMQSRGISQKRAKKILTLAFAMALTDLI 388
>gi|239994258|ref|ZP_04714782.1| Cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
Length = 418
Score = 189 bits (480), Expect = 9e-46, Method: Composition-based stats.
Identities = 69/421 (16%), Positives = 142/421 (33%), Gaps = 43/421 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A + P+ + F L ++ Q+ P +
Sbjct: 22 RQQALEKLKADGWPARRN---ESWRFTPLTPVEKREAKQAVQADSLPVPAI--------- 69
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
D V V ++ V ++ ++ +
Sbjct: 70 -----------DNLNAIDLVFVDGVLVT-----QVNTLNVPAGMSITSLNNDDTATQQAI 113
Query: 178 STV---VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
S+V V + + +N A+ G F+ + G R + + + R ++
Sbjct: 114 SSVYGQVKPTRHMFGLVNDALCQHGIFINVEAGARIDTPIRIVN-MASQNVDAHTRVVVK 172
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
EG+ + +E D L A E D+A +++ + Q G +
Sbjct: 173 VAEGASATVIEQGFG---DTESLTTAFAEYDLADDAHLEHYRFAMFTGKAKQLGGSHFKL 229
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ ++ T + GS ++ GE + + +I + + D +
Sbjct: 230 HNRT--------TLNSTMVGYGSELSRLDVDIHHAGEFADAKMNAIYLLAEGELFDLHST 281
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H N T+ ++GI + + G++ +HR A + +LL+ +T P
Sbjct: 282 IEHAMPNGTTEENARGIVGDKARAVFNGRIHIHRDAQKTLAELNNRNLLLSRRGVINTKP 341
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT ++I +E L+Y L RG+ A+ + GF++E++ +P
Sbjct: 342 ELEIYADDVKCAHGATVAEIEEEALYYMLTRGVSRSKALVMFNFGFIQELINDVPNAAVR 401
Query: 475 E 475
E
Sbjct: 402 E 402
>gi|302525930|ref|ZP_07278272.1| FeS assembly protein SufD [Streptomyces sp. AA4]
gi|302434825|gb|EFL06641.1| FeS assembly protein SufD [Streptomyces sp. AA4]
Length = 390
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 57/292 (19%), Positives = 106/292 (36%), Gaps = 15/292 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V +PK +G + + A+ + +
Sbjct: 97 DRIAAQAYSSFAKATIVTVPKETEASKPSVLRIHGPGEGKVAYGHLQVRAEAFANAVIVL 156
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE V D+A I +VQ+W V+++ G
Sbjct: 157 DHVGSGTYADN-----VEFVIGDSARITVVSVQDWADDAVH--------VSEQHLRLGRD 203
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + T + G + P+ E + ++ Q + + H N S
Sbjct: 204 ATLKHTVVTLGGDLVRVSPTATFADRGGDVEMLGLYFADAGQHQEHRLFVDHAVPNCKSN 263
Query: 366 IVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
++ KG ++ + G V + A + + +L++ A ++P +E +
Sbjct: 264 VMYKGALQGDDAHTVWIGDVLIRAAAEATDTYELNRNLVLTPGARADSVPNLEIETGEIE 323
Query: 425 -LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
H + T + DE LFY RGI EEAA L+V GF E+L ++ + E
Sbjct: 324 GAGHASATGRFDDEQLFYLQSRGIGEEAARRLVVRGFFHEILARIGVPEVRE 375
>gi|255071939|ref|XP_002499644.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226514906|gb|ACO60902.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 406
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 77/421 (18%), Positives = 134/421 (31%), Gaps = 38/421 (9%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + P+ Y D L + S D L +
Sbjct: 9 LRSRAIESLKRARVPNSRVEDYRFTDLAPLLTSKPVAADPAAASSVDAAAWTLADADATR 68
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ + + A A D D V V T L S + A+
Sbjct: 69 VVLVDGAFNADASNVTGAND--VDGVVVSTV---SLGASSGFAIGEVSAVR--------- 114
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE------KGTGQFER 230
G +A +N+A +D + +P G + + + R
Sbjct: 115 -------GAGVFAEINAATASDAVVINVPAGKSLSAPIHIVQLSTSAATKDGEMSSSAPR 167
Query: 231 TLIIADEGSYVSYLEGCTAPQRDEN--QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+ EG+ VS +E A E+ H V ELV A++ ++ VQ
Sbjct: 168 VAVHVGEGASVSIVEEFAAAGGSEDGAYWHNGVCELVLEKGAKVTHTMVQAQTRAAVH-- 225
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ S+ ++ G + G ++ E ++ Q
Sbjct: 226 ------TRATHLTQAEESEYKLAEINVGGKLGRHDLGVTQLGPRTNTELACFNLAGEGQC 279
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
+D +K+ + T+ V K I + + G V V+R A + +LL+
Sbjct: 280 LDLHSKVTLDHEEGTTDQVHKCIVSHASGRGVFDGNVQVNRLAQRTDAGQISRNLLLVPK 339
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
+ P ++ H T S + +E LFY RG+ A +L+V GF E++ K
Sbjct: 340 ATVNVKPNLQIVADDVVCTHGCTVSDLEEEGLFYLQSRGLSPATARSLLVAGFGLEIVSK 399
Query: 468 L 468
+
Sbjct: 400 V 400
>gi|15827240|ref|NP_301503.1| hypothetical protein ML0594 [Mycobacterium leprae TN]
gi|221229718|ref|YP_002503134.1| hypothetical protein MLBr_00594 [Mycobacterium leprae Br4923]
gi|3024895|sp|Q49682|Y594_MYCLE RecName: Full=UPF0051 protein ML0594
gi|466874|gb|AAA17119.1| u1496a [Mycobacterium leprae]
gi|2398705|emb|CAB16170.1| hypothetical protein MLCL536.27c [Mycobacterium leprae]
gi|13092789|emb|CAC30102.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932825|emb|CAR70687.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 392
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/304 (17%), Positives = 106/304 (34%), Gaps = 23/304 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + ++ ++ +KG + I + +
Sbjct: 88 DRVAAQAFSSFQSATVVTVGRDMQIATPINIAVTGPDKGAVVYGHLQIRVCKFGEAVVVI 147
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE + A + + +W G
Sbjct: 148 DHRGSGTYADN-----VEFIVEAAARLTVVWIADWADDMVHLS--------AHHALLGKD 194
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + G E + ++ Q ++S + H + S
Sbjct: 195 AVLRHITVTLGGEVVRVSANVRFSGPGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSN 254
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G ++ + G V +H A + F +L++ N A ++P +E
Sbjct: 255 VLYKGALQGDPVSSRPDAHTVWVGDVLIHPEATGTDTFEVNRNLVLTNGVRADSVPNLEI 314
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+ H + T + DE LFY RGI EE A L+V GF E++ K+ + E
Sbjct: 315 ETDEIVGAGHASATGRFDDEQLFYLRSRGIGEEQARRLLVRGFFGEIISKIAVPQVRE-- 372
Query: 478 KLID 481
+LI
Sbjct: 373 RLIA 376
>gi|227504374|ref|ZP_03934423.1| FeS assembly protein SufD [Corynebacterium striatum ATCC 6940]
gi|227199022|gb|EEI79070.1| FeS assembly protein SufD [Corynebacterium striatum ATCC 6940]
Length = 393
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 60/316 (18%), Positives = 104/316 (32%), Gaps = 28/316 (8%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
L T D A ++ + V I + + +G F T I
Sbjct: 77 DARLGTAGAPADRVAAQAWTS-MPEAQIVTIDADAQVNDPVEITITGAGEGVTSFGATSI 135
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ V+ + + + HA VE + D A + +W +
Sbjct: 136 QVGRHAEVTVV-----LKYVGSGTHADNVEFLLGDGANVTVVVDADWEDNAVHLGHQV-- 188
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G S + G I P E + ++ Q ++
Sbjct: 189 ------ASMGRDSVLRHNTAIFGGEIVRIVPRVAFTAPGGDAEMLGVYFADAGQYFENRL 242
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-------------NNTYRGKVSVHRGAAHSRNFTQCD 400
+ H N SR+ KG G + + G V + + A ++ + +
Sbjct: 243 LVDHSVPNCRSRVFYKGALQGTNQADGTVESGRKEARTCWVGDVLIRQDANNTDTYETNN 302
Query: 401 SLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+L++ A IP +E + H AT + D +FY + RGIP A LI+ G
Sbjct: 303 NLILTEGARADAIPNLEIQTGEIVGAGHAATVGRFDDLEVFYLMSRGIPAAEARRLIIRG 362
Query: 460 FVREVLQKLPMEFAVE 475
F EV+ ++P+E E
Sbjct: 363 FFSEVISRIPVESLRE 378
>gi|262171409|ref|ZP_06039087.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus MB-451]
gi|261892485|gb|EEY38471.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus MB-451]
Length = 417
Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats.
Identities = 67/410 (16%), Positives = 129/410 (31%), Gaps = 40/410 (9%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
+W+ ++ + + P R + L +A + + PE L +
Sbjct: 23 TQWQQQSWAQLQEIGLPK---ERDEGWKYTSLNEFALLSFQAADKQP--LTPETLAWLSQ 77
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
E L + ++ + VI I + +
Sbjct: 78 F-----EGYRLVFSNGAWLSEWSD------------------VIPGVTITPIEQWNEQQL 114
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLI 233
K ++ V +A L A G + + + + G R +
Sbjct: 115 KQVNQSV--QGEAFALLTDATANAGIHLEVSREFVADKPIYLLHVQTANRGVLCSYRHHL 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
++ E + + + A V + A+++++ V
Sbjct: 173 ELARLAHCQLYEHY-FSLDESHGVTCARVSANIAEGAQLEHAKVIEEGSQQHHFAHN--- 228
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
S+ + + S LL G + + +S+++ DS T
Sbjct: 229 -----DLRLTRDSQAQSHSFLLRGQLIRQQTSTLLAGTGAEVQMHSLSLPEANTTSDSRT 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A + S K I+ SN + G + V +GA + +LL+GN+ ++
Sbjct: 284 FLRHQAAHCRSYQSHKVIAKEESNAVFHGLILVDKGALKTDGQMDNHNLLLGNHSQVNSQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
P +E H ATT +I E LFY RGI A+ ++ F E
Sbjct: 344 PQLEIYADDVKCSHGATTGQIDPEQLFYLQARGIERAKALHMLTYAFAGE 393
>gi|153947648|ref|YP_001400719.1| cysteine desulfurase activator complex subunit SufD [Yersinia
pseudotuberculosis IP 31758]
gi|152959143|gb|ABS46604.1| FeS assembly protein SufD [Yersinia pseudotuberculosis IP 31758]
Length = 441
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 98/283 (34%), Gaps = 13/283 (4%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE----RTLIIADEGSYVSYLE 245
L ++ + + +P G L + + R ++ + + +E
Sbjct: 146 HLTESLAQERLHIRLPVGQHSDKPLYLLHISSGNSSDMVNTSHSRHHLVVEANAQAEVIE 205
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
++ A + + DNAE+ + + P G
Sbjct: 206 HF-VSLNEQPHFTGARLTISLGDNAELNHCKLAFETPKSYHFAHN--------DLVLGRD 256
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
++ G+ +T S L GE S S+ + G + D+ T + H + SR
Sbjct: 257 ARARSHSFLLGAGLTRHNTSSQLNGEGSSLSINSLLLPVGREICDTRTYLEHNKGHCESR 316
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K + + G + V + A + ++LL+ N T P +E
Sbjct: 317 QLHKVMVRERGKAIFNGMIKVAKHALKTDGQMTNNNLLLSNLAEVDTKPQLEIYADDVKC 376
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT +I E LFY RGI + A +I+ F EV + +
Sbjct: 377 SHGATVGRIDAEQLFYLQSRGINQADAQQMIIFAFAAEVTEAI 419
>gi|226366394|ref|YP_002784177.1| iron-sulfur cluster assembly protein SufD [Rhodococcus opacus B4]
gi|226244884|dbj|BAH55232.1| putative iron-sulfur cluster assembly protein SufD [Rhodococcus
opacus B4]
Length = 409
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/298 (19%), Positives = 105/298 (35%), Gaps = 21/298 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + V ++ +G F I D + + +
Sbjct: 110 DRVAAQAYSGFETATVVTVGREVEVDETINITITGPGEGKVAFGHLQIRLDAFAKATVVI 169
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
VE V D+A + VQ+W V G
Sbjct: 170 DQRGSGTFAEN-----VEFVLGDSAHLTVVAVQDWADDTVH--------VASHHARLGRD 216
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + G E + ++ Q + + H + S
Sbjct: 217 AVLRHNAVSLGGDLVRLSATVKYDGPGGDAELLGLYFADAGQHFEQRLLVDHSQPHCKSN 276
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+V KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 277 VVYKGALQGDPESGKPDAHTVWVGDVLIRAAAEGTDTFELNRNLVLTDGARADSVPNLEI 336
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ H + T + DE LFY RGIPE+AA L+V GF E++ K+ + E
Sbjct: 337 ETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAARRLVVRGFFHEIINKIAVAEIRE 394
>gi|240171377|ref|ZP_04750036.1| hypothetical protein MkanA1_18841 [Mycobacterium kansasii ATCC
12478]
Length = 383
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 106/309 (34%), Gaps = 22/309 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + + ++ +G + I +E +
Sbjct: 81 DRVAAQAFSSFNSATLVTVGRDTQIAEPVNITVTGPGEGATAYGHMQIRVEELGEAVVII 140
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE V D A + + +W G
Sbjct: 141 DHRGSGTYADN-----VEFVVADAARLTVVWIADWADDTVHLS--------AHHARLGKD 187
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + E + ++ Q ++S + H + S
Sbjct: 188 AVLRHVAVMLGGEVVRMAANVRFDAPGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSN 247
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 248 VLYKGALQGDPASSRPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEI 307
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H + T + DE LFY RGIPEE A L++ GF E++ K+ + E
Sbjct: 308 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFGEIISKIAVPEVRERL 367
Query: 477 QKLIDISLE 485
I+ LE
Sbjct: 368 TAAIEHELE 376
>gi|319898937|ref|YP_004159030.1| ABC-type transport system [Bartonella clarridgeiae 73]
gi|319402901|emb|CBI76452.1| ABC-type transport system [Bartonella clarridgeiae 73]
Length = 422
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 152/433 (35%), Gaps = 47/433 (10%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A + + PS + + +L S + + LL
Sbjct: 36 IRKKAIELFQKTRLPS---RKMEYWHYTNLRVLLKSVSDFSEFNSEQSIDTLLPENIVFS 92
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
I + L+ + GV ++ A ++ +
Sbjct: 93 IENGKALTLSKIA--------------------------GVEVEHLATAFDKNSAEINST 126
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ +NF LN+A TDG I + + + F R I
Sbjct: 127 I-----SDENFIGQLNTAFVTDGWLFNISDNTKLDAPIELQNIQMGGQSHTFSR--IKVG 179
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
+ S +E D++ ++V L N+ + + +++ +Q
Sbjct: 180 KNSQAVIIER--QIGNDKDTFVSSVFSLNLAANSSVTWILIRDRGSNATQFG-------- 229
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ +++ + GS + + L G++S + +I + +G D +
Sbjct: 230 QFRALLAEDAELKLYVINIGSQLNRQEIDIELLGKKSNFQLRAINLLSGKTHSDLTMTVR 289
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H+ + + SR + + + ++ ++G + V + A + C+SL+I ++ P +
Sbjct: 290 HVEEKSISREIVRNVVTDKAHGAFQGVIRVAQKAQETDARMACNSLIISDDAEFDVKPEL 349
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP-MEFAVE 475
E H AT +KI+ +HLFY + RGI + A L+V GF+ E++ +
Sbjct: 350 EIFADDVACSHGATVTKINYDHLFYLMARGISFKIACELLVKGFISELIDDIKQDSIHTI 409
Query: 476 AQKLIDISLEGSV 488
+I LE +V
Sbjct: 410 LSNIISKWLEKNV 422
>gi|111024147|ref|YP_707119.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|110823677|gb|ABG98961.1| FeS assembly protein [Rhodococcus jostii RHA1]
Length = 409
Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/298 (19%), Positives = 104/298 (34%), Gaps = 21/298 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + V ++ + F I D + + +
Sbjct: 110 DRVAAQAYSGFETATVVTVGREVEVAETINITVTGPGEDKVAFGHLQIRLDAFAKATVVI 169
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
VE V D+A + VQ+W V G
Sbjct: 170 DQRGSGTFAEN-----VEFVLGDSARLTVVAVQDWADDAVH--------VASHHARLGRD 216
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + G E + ++ Q + + H + S
Sbjct: 217 AVLRHNAISLGGDLVRLSATVKYDGPGGDAELLGLYFADAGQHFEQRLLVDHSQPHCKSN 276
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+V KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 277 VVYKGALQGDPNSGKPDAHTVWIGDVLIRAAAEGTDTFELNRNLVLTDGARADSVPNLEI 336
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ H + T + DE LFY RGIPE+AA L+V GF E++ K+ + E
Sbjct: 337 ETGEIVGAGHASATGRFDDEQLFYLRARGIPEDAARRLVVRGFFHEIINKIAVAEIRE 394
>gi|169629832|ref|YP_001703481.1| hypothetical protein MAB_2748c [Mycobacterium abscessus ATCC 19977]
gi|169241799|emb|CAM62827.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 398
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 58/308 (18%), Positives = 112/308 (36%), Gaps = 22/308 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F+ + V + K + +G + T + A S + +
Sbjct: 99 DRVAAQAYSSFSTATVVSVGKQQVVADPIEISLSGPGQGQVAYGHTQVRAGALSESAVV- 157
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ +A VE V D A + ++ +W VT G
Sbjct: 158 ----IDYRGSGTYAENVEFVLDDAARLTVVSIADWADDAVH--------VTTHHAKLGKD 205
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + E + ++ Q + + H N S
Sbjct: 206 AVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGLYYADEGQFFEHRLLVDHAQPNCKSN 265
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+V KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 266 VVYKGALQGDPSSDKPDAHTVWIGDVLIRAEATGTDTFELNRNLILTDGARADSVPNLEI 325
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H + T + DE LFY RGIPEE A L+V GF ++++ ++ +E +
Sbjct: 326 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEDARRLVVRGFFQDIIGRIGIESVRDRL 385
Query: 477 QKLIDISL 484
+ I+ L
Sbjct: 386 TEAIEQEL 393
>gi|118467974|ref|YP_887438.1| FeS assembly protein SufD [Mycobacterium smegmatis str. MC2 155]
gi|118169261|gb|ABK70157.1| FeS assembly protein SufD [Mycobacterium smegmatis str. MC2 155]
Length = 403
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 59/348 (16%), Positives = 119/348 (34%), Gaps = 31/348 (8%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGD---------NFYAALNSAVFTDGSFVYIPK 206
G A+ E + + TV + + AA + F++ + V + +
Sbjct: 62 GADGKATGSALIEVSERPGVTIETVERGDERLGQGGVPADRVAAQAFSSFSNATVVTVGR 121
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
V+ + +G + + +E + + +E V
Sbjct: 122 NVQVDEPVEITITGPGEGNTAYGHVQVRVEELGEAVVVIDHRGSGTYADN-----IEFVV 176
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
D A +K ++ +W V+ G + + + G +
Sbjct: 177 GDAATLKVVSIADWADDTVH--------VSTHHATLGKDAVLRHFAVTLGGDVARLTGRV 228
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNT 379
E + ++ Q +S + H + S + KG G ++
Sbjct: 229 RFAAPGGDAELLGLYFADDGQHFESRLLVDHAQPHCRSHVTYKGALQGDPASDKPDTHTV 288
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEH 438
+ G V + A + + +L++ + A ++P +E + H + T + DE
Sbjct: 289 WVGDVLIRAEATGTDTYEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQ 348
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
LFY RGIPE+ A L+V GF E++QK+ + + I+ LE
Sbjct: 349 LFYLRARGIPEDQARRLVVRGFFGELIQKIAVPAVRDRLTAAIEHELE 396
>gi|254522712|ref|ZP_05134767.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
gi|219720303|gb|EED38828.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
Length = 420
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 83/431 (19%), Positives = 157/431 (36%), Gaps = 34/431 (7%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P R A + L P +D LL
Sbjct: 16 DARREVLDAALRDGLP---AARNEAWKYTSLRQLERRAFAAAPLQGPALDATLLEDI--- 69
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
V V+ D+ + +GV P+S A+ + D V+
Sbjct: 70 ------------PAPRLVFVNGRLDAALSDV----QALPAGVQLQPLSAALADGEDAVR- 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
+L + +A LN+A+ +G + + +GV+ + L F T R LI
Sbjct: 113 FLGRRYERSEEIFARLNAALADEGVVLRVDEGVQVDVPLQLVFASVAGDTDLAWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L V+ + +K++ VQ +
Sbjct: 173 ELRAGASLGVVEH-RFSVGDSAHLDNTVLHAHVARDGVLKHARVQ-------ASSARQTS 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
F+ + ++ LE G+A++ + L G+ + + + NG + +++
Sbjct: 225 FL-RTDAVLARDAQYHRVDLELGAALSRHELNVRLEGDNAQLTANGVLLGNGRRHVETRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T ++ +G++A S + G + + GA + +LL+ + T
Sbjct: 284 GIDHIARDTACELLWRGVAANRSRVVFHGGIQIREGADGTDANLSNKNLLLSADAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ LFY RG+P+ A AL+ F E L+ LP
Sbjct: 344 PTLVIDADEVKAAHGATVGQLDANALFYLRSRGLPQAQAQALLSAAFCHEPLKILPEALR 403
Query: 474 VEAQKLIDISL 484
+ + +D +L
Sbjct: 404 EQLARRLDKAL 414
>gi|332982878|ref|YP_004464319.1| SufBD protein [Mahella australiensis 50-1 BON]
gi|332700556|gb|AEE97497.1| SufBD protein [Mahella australiensis 50-1 BON]
Length = 415
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/404 (19%), Positives = 154/404 (38%), Gaps = 18/404 (4%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
DL + P L + E+ GI E D +
Sbjct: 30 DLSVFEEPDESEAVDELSKLPREIQEAAIASGIDPTEANR--------SGSFMQLDHTVI 81
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
++ + M I++A+ ++P++ +KY V + Y A + G F+ +
Sbjct: 82 YRNIQKAYGDK-LEIMDINDAMAKYPEIREKYWWRAAKVDQDKYTAFSELHDVHGYFIRV 140
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
G + + + + E Q +I+ +EG+ + GC+ + EN LH + E
Sbjct: 141 FAGQKVDKPIQSCLMLQENARVQNVHNVIVVEEGADAQVITGCSLAPKVENGLHLGISEF 200
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
NA++ ++ + NW P I+ L +P
Sbjct: 201 FVEKNAKLTFTMIHNWAPEFHVRPRSA-------AVVDDNGVFINNYVLLKPVRSIQSFP 253
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
S L G+ S F S+ ID G++++ + ++ + +S+ I S RG +
Sbjct: 254 SARLVGKNSVAAFNSLLYGLEDSNIDVGSRIILEGEGSSGQAISRAIVNDSSKIYARGAL 313
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
SR C +L+ + + +P + S+ L HEA I++E + Y +
Sbjct: 314 --ESKQDDSRAHLDCRGILMSPHGMMYAVPELLSEAPGSYLSHEAAIGPIAEEEVQYLMS 371
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
RG+ ++ A++LI GF+ + LP ++I+ + + S+
Sbjct: 372 RGLTKDEAVSLITRGFMDVKILGLPKMLEDYISQMIEATQKESM 415
>gi|300934489|ref|ZP_07149745.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium resistens DSM
45100]
Length = 401
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 55/330 (16%), Positives = 107/330 (32%), Gaps = 24/330 (7%)
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
L + V D + L D A + +V + K
Sbjct: 67 LARIAVDASGSDAVEISKLDNADELLGRAGAPVDRAAAQAWEN-TKEADYVLVKKDAVLD 125
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
++ + + L+ + + + + H+ VE V D A+
Sbjct: 126 QPVNITIDGPGENGVSYGNLLVELETHAEAVV-----YIRYQGSGAHSDNVEFVVGDGAK 180
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ ++W G + + G + P
Sbjct: 181 LTVVVFEDWNRDGVHLSNS--------HILVGRDATVRHYYAAFGGEVVRAVPHVRYTAP 232
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF---------SNNTYRG 382
E + ++ Q + + H KN S ++ KG G + + G
Sbjct: 233 GGDAELLGLYFADAGQYFEQRLLVDHSIKNCRSNVLYKGALQGEPGKQTRANEARTAWIG 292
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFY 441
V + A + + + ++L++ A ++P +E + H AT + DE +FY
Sbjct: 293 DVLIRPDATGTDTYEKNNNLILTTGARADSVPNLEIQTGEIVGAGHAATVGRFDDEQMFY 352
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPME 471
RGIP+ A LIV GF +V++++P+E
Sbjct: 353 LQSRGIPKAQAKMLIVRGFFTDVIKRIPLE 382
>gi|15965486|ref|NP_385839.1| hypothetical protein SMc00532 [Sinorhizobium meliloti 1021]
gi|307302607|ref|ZP_07582363.1| FeS assembly protein SufD [Sinorhizobium meliloti BL225C]
gi|307318454|ref|ZP_07597888.1| FeS assembly protein SufD [Sinorhizobium meliloti AK83]
gi|15074667|emb|CAC46312.1| Putative FeS assembly protein [Sinorhizobium meliloti 1021]
gi|306895794|gb|EFN26546.1| FeS assembly protein SufD [Sinorhizobium meliloti AK83]
gi|306902971|gb|EFN33562.1| FeS assembly protein SufD [Sinorhizobium meliloti BL225C]
Length = 425
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 74/412 (17%), Positives = 143/412 (34%), Gaps = 45/412 (10%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
T P+ R A + DL ++ DP + +P +
Sbjct: 45 KTAGLPT---RRVEAWHYTDLRTLLR--------AVPAADPTAFADRVEPVVPGSSVLSV 93
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
Q +V + S + + +G+ + +AI
Sbjct: 94 RNGQADIKSVPEHLTARSYTESLLDGSAVAGLSVLGSDDAI------------------- 134
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+N + G + + G + + + R + G+ + +E
Sbjct: 135 ---GRINGGLVRGGLEITVAAGAQIEAPIEIQVVQSHGQA--HTRFPVSFGAGAKATVIE 189
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ + + + ++V ++ D A++ + +Q P D+ + G
Sbjct: 190 RHLSTNAEPSFV-SSVSDVTLADGADVIWIILQQQGPADTHLG--------QIRFDLGKD 240
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+K+ + G + + GE S I + G D + H +TTS
Sbjct: 241 AKLHLFVINAGGKLVRQELHGRASGEGSDLTLRGINLLGGDSHTDLTFTLSHDVPHTTSS 300
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ + + + ++GK+ V + A + C++LL+ ++ P +E
Sbjct: 301 EIIRNVVFDRAKGVFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQC 360
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL-PMEFAVEA 476
H AT I LFY L RGIPE A A++VN FV E++++L E VEA
Sbjct: 361 GHGATVIDIDHTQLFYLLARGIPENKARAMLVNAFVAEIVEELEDDEALVEA 412
>gi|289642755|ref|ZP_06474893.1| FeS assembly protein SufD [Frankia symbiont of Datisca glomerata]
gi|289507408|gb|EFD28369.1| FeS assembly protein SufD [Frankia symbiont of Datisca glomerata]
Length = 425
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 59/324 (18%), Positives = 115/324 (35%), Gaps = 19/324 (5%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
EH L + V+ D A + +P R++ G
Sbjct: 118 EHVGLDDARVGRVLTPVDRVSA-FAMTRAERAVVITVPAESAPAEP--VIVRLHGGGGVA 174
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+ ++ + + + T A VEL D+A + ++Q+W G
Sbjct: 175 YGHLVVEVGAFASATVVLDHTGAA-----TFAGNVELSVGDSASLTLVSLQDWDAGAVHV 229
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
G ++ + G + P+ G E Y + ++ Q
Sbjct: 230 AAH--------AAAVGRDARFRSFTVTLGGDLVRLSPTVTYAGPGGDAELYGLFFTDAGQ 281
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISA-GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+ + H ++ SR+ KG ++ + G V + A + + +L++ +
Sbjct: 282 HQEHRLLVDHGPRSCRSRVAYKGALQGDGAHAVWIGDVVIGADAVGTDTYELNRNLVLTD 341
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A ++P +E H + T + DE LFY + RGIP + A L+V GF E++
Sbjct: 342 GARADSVPNLEISTGEVTGAGHASATGRFDDEALFYLMARGIPADEARRLVVRGFFAEIV 401
Query: 466 QKLPMEFAVE-AQKLIDISLEGSV 488
++ ++ E ++ L G V
Sbjct: 402 DRIEIDSLRERIAAAVEAELGGVV 425
>gi|309390038|gb|ADO77918.1| SufBD protein [Halanaerobium praevalens DSM 2228]
Length = 396
Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats.
Identities = 69/374 (18%), Positives = 142/374 (37%), Gaps = 8/374 (2%)
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ L E ++ +E L + L + + + K +KK
Sbjct: 14 QSKLLSKKRIEAVKEFENLEQNNFNRINLNDYDLPEYSPYNKEYLKTKKGQEKLIVKKMT 73
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
E + + + Y L A + G F+ +PK + L
Sbjct: 74 DNLDNEKEILNYLQEFKTNKVEKGNKGLGAKYMHLADAFYNTGLFIKVPKNSDFKLPLEI 133
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
++ +++ + I+A+E S ++ + + H + ++ DNA +
Sbjct: 134 FYELDKANPFLIDNNFIVAEENSNLTIVIDYRMQAKKLEAFHNGLTRVIVKDNAVLNIIK 193
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
VQ + + K++W LE G+ + +L E S
Sbjct: 194 VQRFNDQSYNFDSNFSIISNQ--------GKLNWIPLELGAKNSITNNENILAAEGSEAS 245
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
S+ +G +++D G KM H + + S I SKG+ + +RG + +GA+ ++
Sbjct: 246 ISSVYFGDGQRKLDLGFKMNHQGRYSKSEIESKGVLKDTAQKVFRGDLYFQKGASQAKGS 305
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ + LL+ + +IP + S+ + EH + +I ++ LFY + RG+ + A L+
Sbjct: 306 EKEEVLLLNKTVDSDSIPALFSEEDNVEGEHAVSAGQIDEQQLFYLMSRGMTKAEAKQLM 365
Query: 457 VNGFVREVLQKLPM 470
V + K+P+
Sbjct: 366 VEAAFNPIFAKIPL 379
>gi|317505958|ref|ZP_07963790.1| FeS assembly protein SufD [Segniliparus rugosus ATCC BAA-974]
gi|316255734|gb|EFV14972.1| FeS assembly protein SufD [Segniliparus rugosus ATCC BAA-974]
Length = 373
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 63/302 (20%), Positives = 117/302 (38%), Gaps = 18/302 (5%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ +AL A DG V + +G + G + +I G+ + +
Sbjct: 82 DKASALAMAHAGDGGHVVVAEGASPDRPVVLSRV--GAGGRSYAHHIIEVGAGAEATIVA 139
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ AA VEL+ D A+ + V + G + G
Sbjct: 140 EHSGLT-----QIAANVELIIGDGAQCTFIVVNDEESGS--------TRLASYAALLGRD 186
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
S+ + ++ G ++ P+ G E I ++ Q ++S + H N +S
Sbjct: 187 SRYRYVEVALGGSLVRTVPTVRFAGPGGHAELCGITLAGDGQHLESRLFVDHDQPNCSSN 246
Query: 366 IVSKGIS-AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-C 423
++ K + + G V + A ++ + +LL+ A ++P +E +
Sbjct: 247 VLYKNALLTSAARTVWVGDVRIRPEATGTQTYELNRNLLLAKGARADSVPNLEIETGQIV 306
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDI 482
H +TT + +E +FY RGIPE+ A L++ GF EVL K+P E +L++
Sbjct: 307 GAGHASTTGRFDEEQMFYLRSRGIPEDEARRLVLRGFFGEVLAKIPEESVRARVAELVEN 366
Query: 483 SL 484
L
Sbjct: 367 KL 368
>gi|116790030|gb|ABK25476.1| unknown [Picea sitchensis]
Length = 474
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 69/409 (16%), Positives = 143/409 (34%), Gaps = 38/409 (9%)
Query: 73 WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
W + + F D+ + K ++ E L P+ Q + G +
Sbjct: 79 WPSAKDESFRFTDIKFLKQSK---------------IQVSEPLNSPLDLQGLENGRPGAY 123
Query: 133 VAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALN 192
+ D + + GV +S + + L + G + +++LN
Sbjct: 124 TILL--IDGLLSTSHSHTAGLPHGVFVGSLSS-LPDDYVLPPLEAAD----GGDLFSSLN 176
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKG------TGQFERTLIIADEGSYVSYLEG 246
D V +P+G + L + + G R +++ +G+ + +E
Sbjct: 177 GIGSRDLGVVIVPEGCKLERPLHVVYYSQQGGDDLQSLCVSNPRLVVVLGKGAEMEIVEE 236
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
+++ +V+ + + A++ +S VQ P K +G S
Sbjct: 237 FRGAA-NKSYWTNSVLHVSLEEKAQLCHSFVQLQNPCAVHMKWTF--------VQQGTLS 287
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+ +G ++ G + E + ++ Q D +K++ SR
Sbjct: 288 SYKLVETSSGGRLSRHNLQIQQLGPDTVTEVSTFHLAGENQTQDLHSKIILNHPRGYSRQ 347
Query: 367 VSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K I S + + G V V+R A + SLL+ + P ++
Sbjct: 348 LHKCIVTHSSAHAVFDGNVKVNRHAQLTDAGQLSRSLLLAPRATVNVKPNLQIVADDVKC 407
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
H A S + ++ LFY RG+ + A +V F EV+++ P ++
Sbjct: 408 SHGAAISDLEEDQLFYFQARGVDAKTARNALVFSFGAEVMERFPDKYLR 456
>gi|120403718|ref|YP_953547.1| FeS assembly protein SufD [Mycobacterium vanbaalenii PYR-1]
gi|119956536|gb|ABM13541.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
vanbaalenii PYR-1]
Length = 399
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/308 (18%), Positives = 105/308 (34%), Gaps = 22/308 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + + IP + +G + I E + +
Sbjct: 97 DRVAAQAYSSFESATLIEIPNQAVIRDPIEVRITGPGEGATAYGHLQIRVGELAEAVVVI 156
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ +E V D A ++ ++ +W VT G
Sbjct: 157 DHRGSGTYADN-----IEFVVGDGATLRVVSIADWADDVVH--------VTMHHALLGRD 203
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G ++ E + ++ Q +S + H N S
Sbjct: 204 AVLRHAAVTLGGSVVRMTGRVRYTAPGGDAELLGLYYADAGQHFESRLLVDHSQPNCKSD 263
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 264 VKYKGALQGDPDSRKPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEI 323
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H + T + DE LFY RGIPE A L+V GF E++ K+ + E
Sbjct: 324 ETGEIVGAGHASATGRFDDEQLFYLRARGIPENQARRLVVRGFFNEIIAKIAVPAVRERL 383
Query: 477 QKLIDISL 484
+ I+ L
Sbjct: 384 TEAIEREL 391
>gi|159490004|ref|XP_001702979.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158270886|gb|EDO96717.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 482
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 83/424 (19%), Positives = 142/424 (33%), Gaps = 36/424 (8%)
Query: 51 PDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLR 110
P + R + T++ P+ Y F D+ V ELL
Sbjct: 62 PSSLAALREQSKSALATLRMPTTRNEDYR---FTDIAPLLRTNVQPAAAG-AAVPSELLA 117
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+E L G V VD V SG+ + P
Sbjct: 118 AHE-----------LPGAAARLVVVDGVLRPELSSGL-------SGLPAGTYVGPLAGAP 159
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGT 225
+ VK+ L ++ +A LN ++ + V +P + L + ++
Sbjct: 160 EAVKQKLGSLSNSRGGPFAVLNGSLVPEVLVVAVPAERQLEGPLFVLHLASGATGADEVA 219
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
R L+ A GS +E A L AV EL A +++S VQ G
Sbjct: 220 ANAPRLLLHAGTGSSAELVEEYVALPGGRRYLTVAVGELFLEAAASVRHSYVQREGEGSF 279
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
K + + + RS+ + + G AI G ++ + +
Sbjct: 280 HFKSTLVH--------QAERSQYTLAEASVGGAIARHDLVIQQGGPETHTQMSHFLLCGP 331
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q D +++ + T+ + K I + + G V V+R A + +LL+
Sbjct: 332 SQTHDLHSRLTLDHPHGTANQLHKCIVSHASGRGVFDGNVKVNRLAQKTDAGQLSRNLLL 391
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ P ++ H S + D+ LFY RGI E+A +V F EV
Sbjct: 392 VPLATVNVKPNLQIIADDVKCTHGCAVSDLRDDELFYFRARGISAESARQALVFSFGAEV 451
Query: 465 LQKL 468
+Q++
Sbjct: 452 IQRM 455
>gi|256391459|ref|YP_003113023.1| FeS assembly protein SufD [Catenulispora acidiphila DSM 44928]
gi|256357685|gb|ACU71182.1| FeS assembly protein SufD [Catenulispora acidiphila DSM 44928]
Length = 407
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 60/340 (17%), Positives = 121/340 (35%), Gaps = 23/340 (6%)
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
K V + E L D A A FT+ + + +P+
Sbjct: 85 KVAVDVAASEPVLVETVGRDDARLGGAGAPVDRASALAW-AGFTEATVITVPQEAEVAEP 143
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ + G F L+ + + + ++ V+ + D+A++
Sbjct: 144 VRV--TLTGSGGTVFGNVLVDVKPFAKAVVV-----LDYQGSATYSENVQFLVGDSADLT 196
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+Q+W ++ G ++ + G + P
Sbjct: 197 VIALQDWADDAVHLS--------QQQARLGRDARFQSINVSFGGDLVRLTPRVAYTEPGG 248
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAH 392
E + ++ Q ++S + H A + SR+ KG G + + G V + A
Sbjct: 249 DAELLGVYFADAGQHLESRLLVDHSATHCKSRVTYKGALQGQDAHTVWVGDVLIRAEAEQ 308
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ + +L++ + A ++P +E + H + T + DE LFY RGI E+
Sbjct: 309 TDTYELNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQARGIREDE 368
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLI---DISLEGSV 488
A L+V GF +V+ ++ + E +L+ + L G+V
Sbjct: 369 ARRLVVRGFFADVIGRIGIPDVQE--RLMTKVEEELAGAV 406
>gi|325293224|ref|YP_004279088.1| iron-sulfur cluster assembly protein [Agrobacterium sp. H13-3]
gi|325061077|gb|ADY64768.1| putative iron-sulfur cluster assembly protein [Agrobacterium sp.
H13-3]
Length = 423
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 57/279 (20%), Positives = 103/279 (36%), Gaps = 11/279 (3%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D+ +N + DG + IP + R + +GS +
Sbjct: 128 SKDDVIGRINGSFVRDGLMLDIPADAEIEKPIELQAIHGAGQV--HSRFPVRFGKGSKAT 185
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+E + L ++V ++V D AE+ + +Q D +
Sbjct: 186 VIERHL-SVTSDAALVSSVTDIVVEDGAEVTWIILQQQGAADIHLG--------QLRMKI 236
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +KI + G + + + GE + + + G D + H NT
Sbjct: 237 GADAKIRLFVINAGGKLVRQELRIDVDGEGTDLTVRGVNLLGGETHTDVTMVLGHNVPNT 296
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
TS V + + + ++G + V A + C++LL+ ++ P +E
Sbjct: 297 TSTEVFRNVVFDRAKGIFQGMIRVAPDAQKTDAKMACNTLLMSDDGEFSAKPELEIFADD 356
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
H AT + I D HL+Y + RG+P A A++VN FV
Sbjct: 357 VQCGHGATVADIDDNHLYYLMARGVPRAKARAMLVNAFV 395
>gi|319442081|ref|ZP_07991237.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium variabile DSM
44702]
Length = 394
Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 107/297 (36%), Gaps = 22/297 (7%)
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
++ I K ++ + T++ + + + + + +H+
Sbjct: 110 YISIDKESVLTEPVTIVITGAGDDVTTYGTTVVDLGNFAEAVVV-----IRYEGDGVHSD 164
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+E V D +++ ++W G + + T G +
Sbjct: 165 NLEFVLGDGSQLTVVVWEDWGRTAVHLSNS--------HVLVGRDATVRHTSAIFGGDVV 216
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF----- 375
P G E + ++ Q + + H N S ++ KG G
Sbjct: 217 RALPHVRYAGPGGDAEMLGVYFADAGQYFEQRLLVDHSQPNCRSNVLYKGALQGEEGRHG 276
Query: 376 --SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTS 432
+ + G + A + + +L++ A IP +E + H AT
Sbjct: 277 TEARTVWIGDCLIRPDATGTDTYETNKNLVLTGGARADAIPNLEIQTGEIVGAGHAATVG 336
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDISLEGSV 488
+ DEH+FY + RGIP+E A LI+ GF +V++++P+E + +++ L +V
Sbjct: 337 RFDDEHMFYLMSRGIPDEVARRLIIRGFFSDVIRRVPVEQVRNSLEDVVEQELANTV 393
>gi|150396679|ref|YP_001327146.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
gi|150028194|gb|ABR60311.1| FeS assembly protein SufD [Sinorhizobium medicae WSM419]
Length = 425
Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats.
Identities = 75/422 (17%), Positives = 145/422 (34%), Gaps = 46/422 (10%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
T P+ R A + DL P + + L +P +
Sbjct: 45 KTSGLPT---RRVEAWHYTDLRTLLRAVPAADPTAFAERVDPL--------VPGSSVLSV 93
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
Q V S + + +G+ + +AI
Sbjct: 94 RNGQADIKNVPEQLTVRSYTESLLDGSAAAGLSVLGADDAI------------------- 134
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+N + G + + GV + + R + G+ + +E
Sbjct: 135 ---GRINGGLVRGGLEIAVAAGVEIEAPVEIQVVQSHGQA--HTRFPVSFGAGAKATVIE 189
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ +++ + ++V ++ + A++ + +Q P D+ + G
Sbjct: 190 RHLSTNAEQSFV-SSVSDVTLAEGADVIWIILQQQGPADTHLG--------QIRFDLGKD 240
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+K+ + G + + GE + I + G D + H +TTS
Sbjct: 241 AKLHLFVINAGGKLVRQELHGRATGEGADLTLRGINLLGGESHTDLTFTLSHDVPHTTSS 300
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ + + + ++GK+ V + A + C++LL+ ++ P +E
Sbjct: 301 EIIRNVVFDRAKGVFQGKILVAQDAQKTDAKMSCNTLLLSDDADFSAKPELEIFADDVQC 360
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL-PMEFAVE-AQKLIDIS 483
H AT I LFY L RGIPE A A++VN FV E++++L E VE + +I
Sbjct: 361 GHGATVIDIDHTQLFYLLARGIPENKARAMLVNAFVAEIVEELEDDEDLVESLESVISAW 420
Query: 484 LE 485
LE
Sbjct: 421 LE 422
>gi|41407286|ref|NP_960122.1| hypothetical protein MAP1188 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395638|gb|AAS03505.1| hypothetical protein MAP_1188 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 396
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 108/308 (35%), Gaps = 22/308 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + + +P+ + + +G + I +E + +
Sbjct: 92 DRVAAQAFSSFNSATLITVPRDTQIAEPIGVTVTGPGEGAVAYGHLQIRVEELAEAVVVI 151
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE V D A + + +W V+ G
Sbjct: 152 DHRGSGTLADN-----VEFVVDDAARLTVVWLADWADDAVH--------VSMHHARLGKD 198
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + E + ++ Q ++S + H + S
Sbjct: 199 AVLRHVAVTLGGELVRLTANVRYTSTGGDAELLGLYFADDGQHLESRLLVDHAQPDCKSN 258
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 259 VLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEI 318
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEA 476
+ H + T + DE LFY RGIPEE A L++ GF E++ K+ + E
Sbjct: 319 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERL 378
Query: 477 QKLIDISL 484
I+ L
Sbjct: 379 TAAIEHEL 386
>gi|218679563|ref|ZP_03527460.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 894]
Length = 264
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 10/247 (4%)
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ +E A D L + + ++ AE+ + +Q D+ +
Sbjct: 24 KATVIERHHAVTGDAA-LVSHISDISIGKGAELTWIILQQQGAEDTHLG--------QIR 74
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
G +K+ + G + + + GE + I + D + H
Sbjct: 75 IDLGADAKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDV 134
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S V + + + ++G + V A + C++LL+ ++ P +E
Sbjct: 135 PHTGSTEVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIF 194
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK- 478
H AT + I HL+Y + RGIPE A A++VN FV E++++L E VEA +
Sbjct: 195 ADDVQCGHGATVTDIDANHLYYLMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEG 254
Query: 479 LIDISLE 485
+I LE
Sbjct: 255 VISAWLE 261
>gi|46579434|ref|YP_010242.1| hypothetical protein DVU1021 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603016|ref|YP_967416.1| SufBD protein [Desulfovibrio vulgaris DP4]
gi|46448848|gb|AAS95501.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563245|gb|ABM28989.1| SufBD protein [Desulfovibrio vulgaris DP4]
gi|311233251|gb|ADP86105.1| SufBD protein [Desulfovibrio vulgaris RCH1]
Length = 388
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 86/412 (20%), Positives = 154/412 (37%), Gaps = 35/412 (8%)
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
S+ ++ FD L +D + GI + +Q LAG
Sbjct: 2 SFKKVDLSRYQFDG-------AQASSIGDLTQLDAADKQRLLYAGIDVNQQN-LAGSFMH 53
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
+ S T+ +E G+ + I +A+ + L Y +V + Y
Sbjct: 54 ------MNHSGVHCTSRQE-----GLEILDIKQALDTYHGLPD-YFWKLVDRNKDEYTRA 101
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
G F+ G + + + I G GQ +++ +EG+ + + GC
Sbjct: 102 ADEHLHGGYFIRARAGAKIEAPVQSCLFIKGNGVGQNVHNVVVVEEGAEMHIITGCATAH 161
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+ H + E ++ ++ + NW + +S
Sbjct: 162 DTRSVAHLGISEFYVHKGGKLTFTMIHNWGEEAAVRPRSAGYL-------EEDAVFLSNY 214
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
L YP+ L G S F S+ ++ +D+G ++L A +T I+++ +
Sbjct: 215 VLLKPVTDLQMYPTITLGGRGSVARFNSVIVAPTGSYVDTGNRILLEAPDTRGEIIARTM 274
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
+ G + RG + A +R +C L++G H IP +E L HEA
Sbjct: 275 TTGGTIIN-RG--HIAGHAVPARGHLECKGLILG-GGVIHAIPELEGTQDGVELSHEAAV 330
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP--MEFAVE--AQKL 479
KI+ E + Y + RG+ E+ A + IV GF+ + LP +E AVE +L
Sbjct: 331 GKIAQEEIEYLMARGLDEDEATSTIVRGFLNVDIMGLPEELEKAVEEQINQL 382
>gi|224370021|ref|YP_002604185.1| hypothetical protein HRM2_29330 [Desulfobacterium autotrophicum
HRM2]
gi|223692738|gb|ACN16021.1| hypothetical protein HRM2_29330 [Desulfobacterium autotrophicum
HRM2]
Length = 394
Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats.
Identities = 93/398 (23%), Positives = 153/398 (38%), Gaps = 26/398 (6%)
Query: 85 DLYYYAAPKSIVGPQS-LDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVS 143
DL Y+ G Q LD +DP + K+GI +Q L + V S S
Sbjct: 15 DLSKYSMEAETHGFQESLDSIDPVDADEFIKVGIE--KQSSLRSGSFIQKDASIVHCSRS 72
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY 203
GV I++A+ + P L ++Y+ T++ + + G F+
Sbjct: 73 ----------MEGVEISGIAQALEQDPGL-ERYMWTLLDPEADELSRSTRNAPLQGFFIR 121
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+GV+ L T I ++G Q LIIA+E S + + GC+ ++ LH + E
Sbjct: 122 SRQGVKTEKPLQTCLHIAKEGYAQRVHNLIIAEEDSELHIIAGCSTSSHLQSGLHIGISE 181
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
A +KY+ + W + + IS
Sbjct: 182 FFVKKGATLKYTMIHEWGEKVTVRPKTAVH-------VEEGGVFISNYISLKPVGSLVTN 234
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
P L + + F SI ++ +D G+ + A + I+S+ I AG S + RG
Sbjct: 235 PVTYLEKD-ATARFNSILVAGKGSYMDVGSVVELRAPGARAEIISRAIVAGGSIIS-RG- 291
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ + +C L++ + H IP + L HEA KI + + Y +
Sbjct: 292 -HLKSMVPGVKGHLECKGLIL-KDGLLHAIPELSGFTPGVELSHEAAVGKIDNREIEYLM 349
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
RG+ E AI+ IV GF+ + LP E A K +
Sbjct: 350 ARGLDEGEAISTIVRGFLNVDIDGLPAELAARMDKAVQ 387
>gi|119962266|ref|YP_947849.1| FeS assembly protein SufD [Arthrobacter aurescens TC1]
gi|119949125|gb|ABM08036.1| FeS assembly protein SufD [Arthrobacter aurescens TC1]
Length = 437
Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats.
Identities = 59/314 (18%), Positives = 119/314 (37%), Gaps = 18/314 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K + D A +P ++ E+S + +I
Sbjct: 134 DKRIGQAAIPEDLVSANAWENFAEATVVT-VPAELQADSEVSVL-ITGAGEAPSAQHIVI 191
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+A+ S + + + VE++ D AE+ ++Q W
Sbjct: 192 VAERFSKAVVVLDHQGSA-----VVSENVEIIVEDGAELTVVSLQEWADNAVHASS---- 242
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G +K + G + PS + E + + ++ Q ++
Sbjct: 243 ----QQAKIGRDAKFKHIVVSLGGDLVRVTPSTRFTAPGADVEMFGLYFADAGQHLEQRL 298
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H N SR++ KG G + ++ + G V + + A + + +L++ + A +
Sbjct: 299 FVDHAVANCKSRVLYKGALQGRNAHSVWVGDVLIRKEAEGTDTYEANRNLVLTDGARADS 358
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H + T + DEHLFY + RGIPE+ A L+V GF+ E++Q++ +
Sbjct: 359 VPNLEIETGLIEGAGHASATGRFDDEHLFYLMARGIPEKVARRLVVRGFLNEIIQQIKVP 418
Query: 472 FAVE-AQKLIDISL 484
E ++ L
Sbjct: 419 AIEERLTAAVEREL 432
>gi|308177663|ref|YP_003917069.1| FeS assembly protein SufD [Arthrobacter arilaitensis Re117]
gi|307745126|emb|CBT76098.1| FeS assembly protein SufD [Arthrobacter arilaitensis Re117]
Length = 426
Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats.
Identities = 64/314 (20%), Positives = 121/314 (38%), Gaps = 18/314 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
L+ V D+ +A ++ + IPK +T E + ++
Sbjct: 123 DDALNGVAHTPDDRVSANAWKHASETQVLTIPKNA--EGAQATLRITGESLAAAAQHIIV 180
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+A+E S + + + A VE NA + ++Q W
Sbjct: 181 VAEENSEATVVLDHVGSA-----VLAQNVEFDVQSNARLTVISLQAWEDDAVHASS---- 231
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + G + PS GE++ E Y + ++ Q ++
Sbjct: 232 ----QQALVAAGGSFKHIAVTFGGDLVRVNPSARFTGERAEIELYGLYFADAGQHLEHRL 287
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H N S ++ KG G + + G V + + A + ++ +L++ + A +
Sbjct: 288 FVDHAVANCKSNVLYKGALQGKDAHTVWVGDVLIQKEAVGTDSYEANRNLVLTDGARADS 347
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + + H +TT + DEHLFY + RGI E+ A L+V GF+ E++Q + E
Sbjct: 348 VPNLEIETGLIDGAGHASTTGRFDDEHLFYLMARGIDEKTARRLVVRGFLNEIVQHIGDE 407
Query: 472 FAVE-AQKLIDISL 484
E I+ L
Sbjct: 408 ALQERLTDTIEDEL 421
>gi|224282922|ref|ZP_03646244.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium bifidum NCIMB 41171]
gi|313140081|ref|ZP_07802274.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
gi|313132591|gb|EFR50208.1| ABC-type transport system protein [Bifidobacterium bifidum NCIMB
41171]
Length = 409
Score = 186 bits (473), Expect = 6e-45, Method: Composition-based stats.
Identities = 74/401 (18%), Positives = 137/401 (34%), Gaps = 28/401 (6%)
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS-VSVVT 146
YA P ++ + R+++ + E++ T + FD
Sbjct: 18 PYAVPAAMPSSADRE------PRSFDVNDFAVPERKQDDWRYTPLDRIGEFFDVFKPSGE 71
Query: 147 TFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPK 206
T G A+ + L + TV D A ++ T +
Sbjct: 72 TIIAISYADGTAVDEKHVAVSQCA-LGEGVSGTVSKPSDRAAAVEWNSGRTATVIELSGE 130
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
+ I +I + ++ + R VE+V
Sbjct: 131 IAQ----PVLVNVIGSGDDLDALHLVISTADEAHADVIVEHHGLARLAEG-----VEIVT 181
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
N+ + + VQ W G V + G + + + + G +
Sbjct: 182 GKNSHVSTTFVQEWEKGSKH--------VGNQRIHVGEGASLRHSVVTLGGDVVRIRMDQ 233
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVS 385
GEQ I + + I+ T ++H SR+V KG G ++T+ G
Sbjct: 234 DFGGEQGDLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKDAHSTWVGNAL 293
Query: 386 VHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQ 444
+ A + ++ +L++ A + P +E +N + H ++ + DE LFY
Sbjct: 294 IAPTAPGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQS 353
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
RGIPE A L+V GF E+++++ + F E +ID L
Sbjct: 354 RGIPETEARKLVVRGFFGELVEEIGVPFIAEHLMNVIDRRL 394
>gi|312144388|ref|YP_003995834.1| FeS assembly protein SufD [Halanaerobium sp. 'sapolanicus']
gi|311905039|gb|ADQ15480.1| FeS assembly protein SufD [Halanaerobium sp. 'sapolanicus']
Length = 396
Score = 186 bits (472), Expect = 7e-45, Method: Composition-based stats.
Identities = 60/301 (19%), Positives = 127/301 (42%), Gaps = 19/301 (6%)
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
Y ++ A + G F+ P G + L ++ + E + LI+A+EGS ++ +
Sbjct: 105 YTSMVDAFYNTGLFIKAPAGKEFKVPLEIFYLLEEDNPFLIDNNLIVAEEGSKLTIVIDY 164
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
Q+D H + ++ NA + VQ + + +
Sbjct: 165 KMDQKDFKAFHNGLTRVIVEANAVLNIIKVQRFNDQSVNFDSNFSIISNQ--------GE 216
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
++W +E G+ + +L + S SI ++G +++D KM H ++++S I
Sbjct: 217 LNWIPIELGAKTSITNNENILAEDGSKANISSIYFADGERKMDLAYKMNHQGRHSSSEIE 276
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+KG+ + +RG + +G++ ++ + L++ + +IP + S+ + EH
Sbjct: 277 TKGVLKDRAKKVFRGDLYFQKGSSQAKGAESEEVLMLDKTVVSDSIPALFSEEDNVEGEH 336
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
+ +I LFY + RG+ E A +++ + K+P+ L+GS
Sbjct: 337 AVSAGQIDQNRLFYLMSRGMNETEAKRMMIEAAFNPIFDKIPL-----------NELKGS 385
Query: 488 V 488
V
Sbjct: 386 V 386
>gi|296140208|ref|YP_003647451.1| FeS assembly protein SufD [Tsukamurella paurometabola DSM 20162]
gi|296028342|gb|ADG79112.1| FeS assembly protein SufD [Tsukamurella paurometabola DSM 20162]
Length = 392
Score = 186 bits (472), Expect = 7e-45, Method: Composition-based stats.
Identities = 56/308 (18%), Positives = 110/308 (35%), Gaps = 22/308 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA T+ + + + K + +G F + + S +
Sbjct: 93 DRVAAQAFTSMTEATVLTVAKEAEVAEPIIVRLAGPGEGKTAFTHIQVRLERHSRAVVVL 152
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
T A VE++ D A ++ Q++ +VT+ G
Sbjct: 153 DHTGSG-----TAAENVEVIVGDGASLQIIDAQDFADDAV--------WVTQHHVRVGRD 199
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ ++ G + P E + ++ Q ++ + H N S
Sbjct: 200 ATARHFAVQLGGELVRMTPRVQFDAPGGNAELLGLYFADAGQHLEQRLLVDHSVPNCKSN 259
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+V KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 260 VVYKGALQGDPASKLPDAHTVWVGDVLIRAEAEGTDTFELNRNLVLTDGARADSVPNLEI 319
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEA 476
+ H + T + DE LFY RG+PE+ A L+V GF +E++ ++ + E
Sbjct: 320 ETGEIAGAGHASATGRFDDEQLFYLRSRGVPEDEARRLVVRGFFQELIDRISVPELRERL 379
Query: 477 QKLIDISL 484
I+ L
Sbjct: 380 SAAIENEL 387
>gi|310287365|ref|YP_003938623.1| FeS assembly protein SufD [Bifidobacterium bifidum S17]
gi|309251301|gb|ADO53049.1| FeS assembly protein SufD [Bifidobacterium bifidum S17]
Length = 409
Score = 186 bits (472), Expect = 8e-45, Method: Composition-based stats.
Identities = 74/401 (18%), Positives = 136/401 (33%), Gaps = 28/401 (6%)
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDS-VSVVT 146
YA P ++ + R+++ E++ T + FD
Sbjct: 18 PYAVPAAMPSSADRE------PRSFDVNDFAAPERKQDDWRYTPLDRIGEFFDVFKPSGE 71
Query: 147 TFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPK 206
T G A+ + L + TV D A ++ T +
Sbjct: 72 TTIAISYADGTAVDEKHVAVSQCA-LGEGVSGTVSKPNDRAAAVEWNSGRTATVIELSGE 130
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
+ I +I + ++ + R VE+V
Sbjct: 131 IAQ----PVLVNVIGSGDDLDALHLVISTADEAHADIIVEHHGLARLAEG-----VEIVT 181
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
N+ + + VQ W G V + G + + + + G +
Sbjct: 182 GKNSHVSTTFVQEWEKGSKH--------VGNQRIHVGEGASLRHSVVTLGGDVVRIRMDQ 233
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVS 385
GEQ I + + I+ T ++H SR+V KG G ++T+ G
Sbjct: 234 DFGGEQGDLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKDAHSTWVGNAL 293
Query: 386 VHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQ 444
+ A + ++ +L++ A + P +E +N + H ++ + DE LFY
Sbjct: 294 IAPTAPGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQS 353
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
RGIPE A L+V GF E+++++ + F E +ID L
Sbjct: 354 RGIPETEARKLVVRGFFGELVEEIGVPFIAEHLMNVIDRRL 394
>gi|260578754|ref|ZP_05846661.1| FeS assembly protein SufD [Corynebacterium jeikeium ATCC 43734]
gi|258603052|gb|EEW16322.1| FeS assembly protein SufD [Corynebacterium jeikeium ATCC 43734]
Length = 403
Score = 186 bits (472), Expect = 8e-45, Method: Composition-based stats.
Identities = 57/340 (16%), Positives = 110/340 (32%), Gaps = 27/340 (7%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV E + L D A +V I K ++
Sbjct: 73 GVSDDDAPSVSVEQLQTGDERLGRAGAPVDRAAAQAWEN-TESADYVRISKNTALKAPVT 131
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + ++ + + + + H+ VE V + A++
Sbjct: 132 VTIDGPGEDEVSYGTLVVELEPHAEAVVFVR-----YEGSGAHSDNVEFVVGNGAKLTTV 186
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++W G + + G + P
Sbjct: 187 VFEDWNDDAVHLSNS--------HIQVGRDATVRHYYAAFGGHVVRSVPHVRYTDTGGDA 238
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF---------SNNTYRGKVSV 386
E + ++ Q + + H +N S ++ KG G + + G V +
Sbjct: 239 ELLGLYFADAGQYFEQRLLVDHSIRNCRSNVLYKGALQGEPEKGKDAREARTAWIGDVLI 298
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQR 445
A + + + ++LL+ + A +P +E + H AT + DEH+FY R
Sbjct: 299 RPDATGTDTYEKNNNLLLTSGARADAVPNLEIQTGEIVGAGHAATVGRFDDEHMFYLQSR 358
Query: 446 GIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
GI +A LIV GF +V++++P E E L++ +E
Sbjct: 359 GIDPASAKMLIVRGFFTDVIKRIPEESIRE---LLEDKVE 395
>gi|257068629|ref|YP_003154884.1| Iron-regulated ABC transporter permease SufD [Brachybacterium
faecium DSM 4810]
gi|256559447|gb|ACU85294.1| Iron-regulated ABC transporter permease protein SufD
[Brachybacterium faecium DSM 4810]
Length = 440
Score = 186 bits (472), Expect = 8e-45, Method: Composition-based stats.
Identities = 65/314 (20%), Positives = 114/314 (36%), Gaps = 17/314 (5%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
TV+ D A + SA + K V ++ A E
Sbjct: 140 GTVLVPEDLPTA-VASARTEQALHLVAAKNVAYDAPFRIEMTGRGADRRGNAHIVLEAQE 198
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
S +++ T +A VE++ DNA++ T+ +W +
Sbjct: 199 SSSATFVLNHTGAA-----QYAQNVEMIIGDNAQMTVITLHDWDDDAVH--------IAT 245
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S++ + G + E + S+ Q ++ + H
Sbjct: 246 HHARVGRDSRLKHVAVTLGGSAVRLNSIGEYAAPGGEIEKLGLYFSDENQFFENRLFVDH 305
Query: 358 LAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
A N TS + KG G + + + G V + + A + + +L++ A ++P +
Sbjct: 306 SAPNCTSNVAYKGALQGKNARSVWVGDVLIRKEAEGTNTYELNRNLVLTEGARADSVPNL 365
Query: 417 ESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAV 474
E + H A T + DE LFY RGIPE A L+V GF E++Q++ + E
Sbjct: 366 EIETGEIEGAGHAAATGRFDDEQLFYLRSRGIPEIEARRLVVRGFFAEIIQQIDVPEIRE 425
Query: 475 EAQKLIDISLEGSV 488
I+ L S+
Sbjct: 426 RLSASIEDELARSM 439
>gi|119716777|ref|YP_923742.1| FeS assembly protein SufD [Nocardioides sp. JS614]
gi|119537438|gb|ABL82055.1| Iron-regulated ABC transporter permease protein SufD [Nocardioides
sp. JS614]
Length = 401
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 112/284 (39%), Gaps = 17/284 (5%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ +P + + + R L+ + V+ + T R A
Sbjct: 110 MLLEVPAEAAITDPVVLHLHGESVEDLVWGRLLVRVGANADVTIVVNHTGSARY-----A 164
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
A+ ++ D A + T+Q+W + G + + T + G +
Sbjct: 165 AITTVLVGDGARVNVLTLQDWDDDAVHLG--------RDAIRVGRDASVKHTSISFGGDL 216
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNN 378
+ + G E + ++ Q ++ H A T S ++ KG G ++
Sbjct: 217 VRMHANVEYAGPGGEAELLGLYFADEGQHLEHRLFADHTAPKTKSHVLYKGALQGQGAHT 276
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDE 437
+ G V + + A + + +L++ + C A ++P +E + + H + T++ DE
Sbjct: 277 VWIGNVLIRKVAEGIETYEENRNLVLTDGCQADSVPNLEIETGEIDGAGHASATARFDDE 336
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
LFY RG+ E+ A L+V+GF ++++K+ + E +L+
Sbjct: 337 QLFYLRSRGVSEKEAQRLVVHGFFNDLIRKVGIPSVEE--RLLA 378
>gi|254821668|ref|ZP_05226669.1| FeS assembly protein SufD [Mycobacterium intracellulare ATCC 13950]
Length = 394
Score = 186 bits (471), Expect = 9e-45, Method: Composition-based stats.
Identities = 56/309 (18%), Positives = 109/309 (35%), Gaps = 22/309 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + + +G + I +E + +
Sbjct: 92 DRVAAQAFSSFNSATVVTVARDTEVAKPIEIVVDGPGEGAVAYGHLQIRVEELARAIVVV 151
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE++ D+A + + +W V+ G
Sbjct: 152 DLRGSGTYADN-----VEIIVSDSAALGVIWIADWADDMVN--------VSAHHARLGKD 198
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
S + + G + + + ++ Q I+S + H N S
Sbjct: 199 SVLGHVNVTLGGDLVRTSTTVRFTAAGGDAQLLGTYFADDGQHIESRLLVDHAHPNCRSD 258
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG ++ + G V + A + F +L++ + A ++P +E
Sbjct: 259 VLYKGALQADPESDRPDAHAVWVGDVLIRAEATGTDTFETNRNLILTDGARADSVPNLEI 318
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H + T + DE +FY RGIPE+ A LIV GF E++QK+ + E
Sbjct: 319 ETGEIVGAGHASATGRFDDEQVFYLRARGIPEDQARRLIVRGFFAEIIQKIAVPAVRERL 378
Query: 477 QKLIDISLE 485
+ I+ LE
Sbjct: 379 TEAIEHELE 387
>gi|289805590|ref|ZP_06536219.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 273
Score = 186 bits (471), Expect = 9e-45, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 105/283 (37%), Gaps = 15/283 (5%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIAD 236
PV + L ++ +++ + + R L +E T + L
Sbjct: 1 PVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTAHYRHHL-TLA 59
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + A + + DNA++++ + + Y+F
Sbjct: 60 EGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AFENASSYHFAH 111
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
S S G+A+ + S L GE + S+A+ + D+ T +
Sbjct: 112 NDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLE 170
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H SR + K I + + G ++V + + + ++LL+G T P +
Sbjct: 171 HNKGYCNSRQLHKTIVSDKGRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQL 230
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
E H AT +I DE +FY RGI ++ A +I+
Sbjct: 231 EIYADDVKCSHGATIGRIDDEQMFYLQSRGIRQQEARHMILYA 273
>gi|183982280|ref|YP_001850571.1| hypothetical protein MMAR_2267 [Mycobacterium marinum M]
gi|183175606|gb|ACC40716.1| conserved protein [Mycobacterium marinum M]
Length = 399
Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 106/309 (34%), Gaps = 22/309 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + + ++ +G + I +E +
Sbjct: 88 DRVAAQAFSSFNSATLVTVGRDTQLGEPVNITITGPGEGAVAYGHLQIRVEELGEAVVVV 147
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE V D A + + +W G
Sbjct: 148 DHRGSGTYADN-----VEFVVGDCARLTVVWIADWADDTVHLS--------AHHAKLGKD 194
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + + + ++ Q ++S + H + S
Sbjct: 195 AVLRHVTVTLGGEVVRMSANVRFTAPGGDADLLGLYFADDGQHLESRLLVDHAQPDCKSN 254
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 255 VLYKGALQGDPGSALPDAHTVWVGDVLIRAAATGTDTFEVNRNLVLTDGARADSVPNLEI 314
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H + T + DE LFY RGIPEE A L++ GF E++ K+ + E
Sbjct: 315 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFGEIISKIAVPEVRERL 374
Query: 477 QKLIDISLE 485
I+ LE
Sbjct: 375 TGAIEHELE 383
>gi|91762133|ref|ZP_01264098.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1002]
gi|91717935|gb|EAS84585.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1002]
Length = 414
Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats.
Identities = 75/431 (17%), Positives = 143/431 (33%), Gaps = 46/431 (10%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E+R ++ P+ R F DL +I +D E
Sbjct: 24 EFRKKNLTNFIDKGFPN---KRIEDWKFSDLNQII-SSNIKNLSFYNDKTYEPKDQLSL- 78
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
I E + + VD ++ + + L +G+ I
Sbjct: 79 -INKFEHNKIIFINGVISKVDIKYEDDT------KVLINNGLDLSNNINGI--------- 122
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI--NEKGTGQFERTLI 233
N +LN A+ + + + + L Y N T RT I
Sbjct: 123 ----------NPLVSLNHALASAHIGITVKENYSLNKPLVLYNITTENVNSTALNLRTDI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
++ S + + ++ ++ +A +K + D + I
Sbjct: 173 KLEKNSNLKLVTIFDDQSQNNFININQNFDI--AQDAILKSYKI------DHKTNSNIKY 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
F S TGS +C L + S + Q + T
Sbjct: 225 FYN--NINLEKNSISENFIFSTGSKFIKNEVNCNLNDQYSSAFINGVINLKNLQHHEIKT 282
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ HLA+NT S + K + S Y+GK+ V + A + + +LL+ N
Sbjct: 283 NINHLAENTKSYQLIKTVLNDNSKGIYQGKIFVDQKAQKTNGYQLSKALLLNENTEFDGK 342
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H +T+ + ++ +FY + RG+ + + L++NGF+ + ++K+
Sbjct: 343 PELEIYADDVKCSHGSTSGNLDEDSIFYLMSRGLSYQQSKELLINGFLMDAVEKITD--- 399
Query: 474 VEAQKLIDISL 484
+E + LI +
Sbjct: 400 LEIKNLIKEMM 410
>gi|314976568|gb|EFT20663.1| FeS assembly protein SufD [Propionibacterium acnes HL045PA1]
gi|314984387|gb|EFT28479.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA1]
gi|327328456|gb|EGE70218.1| FeS assembly protein SufD [Propionibacterium acnes HL096PA2]
gi|327444244|gb|EGE90898.1| FeS assembly protein SufD [Propionibacterium acnes HL043PA2]
gi|328759985|gb|EGF73568.1| FeS assembly protein SufD [Propionibacterium acnes HL099PA1]
Length = 424
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/405 (17%), Positives = 132/405 (32%), Gaps = 21/405 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
AAP +DV+ L T I + + G + +
Sbjct: 28 AAPGKGHNVTIENDVESHLHPTPSW---EIADHPMPTGREEIWRFTPIKTFIPVLSEVAL 84
Query: 150 EELKKSGVIFMPISEAI-CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKG 207
E +++G+I + + A DL L + + +AL +A V IP
Sbjct: 85 EPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAE 144
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + ++ + V+ +
Sbjct: 145 TSLKAPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIG 199
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
D A+ VQ W G + G + + Q G +
Sbjct: 200 DGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRICQTAS 251
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSV 386
G ++ Q I+ + H A +T S + +G G ++ + G V +
Sbjct: 252 YNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLI 311
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQR 445
A + +L++ C A +P +E + + H A+T + E LFY R
Sbjct: 312 RPVAKDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSR 371
Query: 446 GIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
G+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 372 GVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 416
>gi|313813416|gb|EFS51130.1| FeS assembly protein SufD [Propionibacterium acnes HL025PA1]
Length = 424
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 72/405 (17%), Positives = 132/405 (32%), Gaps = 21/405 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
AAP +DV+ L T I + I G + +
Sbjct: 28 AAPGKGHNVTIENDVESHLHPTPSW---EIADHPIPTGREEIWRFTPIKTFIPVLSEVAL 84
Query: 150 EELKKSGVIFMPISEAI-CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKG 207
E +++G+I + + A DL L + + +AL +A V IP
Sbjct: 85 EPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAE 144
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + ++ + V+ +
Sbjct: 145 TSLKAPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIG 199
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
D A+ VQ W G + G + + Q G +
Sbjct: 200 DGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRICQTAS 251
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSV 386
G ++ Q I+ + H A +T S + +G G ++ + G V +
Sbjct: 252 YNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLI 311
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQR 445
A + +L++ C A +P +E + + H A+T + E LFY R
Sbjct: 312 RPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSR 371
Query: 446 GIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
G+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 372 GVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 416
>gi|315079569|gb|EFT51562.1| FeS assembly protein SufD [Propionibacterium acnes HL053PA2]
Length = 424
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/405 (17%), Positives = 132/405 (32%), Gaps = 21/405 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
AAP +DV+ L T I + + G + +
Sbjct: 28 AAPGKGHNVTIENDVESHLHPTPSW---EIADHPMPTGREEIWRFTPIKPFIPVLSEVAL 84
Query: 150 EELKKSGVIFMPISEAI-CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKG 207
E +++G+I + + A DL L + + +AL +A V IP
Sbjct: 85 EPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAE 144
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + ++ + V+ +
Sbjct: 145 TSLKAPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIG 199
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
D A+ VQ W G + G + + Q G +
Sbjct: 200 DGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRICQTAS 251
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSV 386
G ++ Q I+ + H A +T S + +G G ++ + G V +
Sbjct: 252 YNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLI 311
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQR 445
A + +L++ C A +P +E + + H A+T + E LFY R
Sbjct: 312 RPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSR 371
Query: 446 GIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
G+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 372 GVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 416
>gi|313808006|gb|EFS46487.1| FeS assembly protein SufD [Propionibacterium acnes HL087PA2]
gi|313819573|gb|EFS57287.1| FeS assembly protein SufD [Propionibacterium acnes HL046PA2]
gi|313823663|gb|EFS61377.1| FeS assembly protein SufD [Propionibacterium acnes HL036PA2]
gi|313825987|gb|EFS63701.1| FeS assembly protein SufD [Propionibacterium acnes HL063PA1]
gi|313829455|gb|EFS67169.1| FeS assembly protein SufD [Propionibacterium acnes HL063PA2]
gi|313839963|gb|EFS77677.1| FeS assembly protein SufD [Propionibacterium acnes HL086PA1]
gi|314919350|gb|EFS83181.1| FeS assembly protein SufD [Propionibacterium acnes HL050PA1]
gi|314954423|gb|EFS98829.1| FeS assembly protein SufD [Propionibacterium acnes HL027PA1]
gi|314962143|gb|EFT06244.1| FeS assembly protein SufD [Propionibacterium acnes HL002PA2]
gi|314986578|gb|EFT30670.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA2]
gi|314990935|gb|EFT35026.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA3]
gi|315100354|gb|EFT72330.1| FeS assembly protein SufD [Propionibacterium acnes HL046PA1]
gi|327452050|gb|EGE98704.1| FeS assembly protein SufD [Propionibacterium acnes HL092PA1]
gi|327457801|gb|EGF04456.1| FeS assembly protein SufD [Propionibacterium acnes HL083PA2]
gi|328755253|gb|EGF68869.1| FeS assembly protein SufD [Propionibacterium acnes HL087PA1]
Length = 424
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/405 (17%), Positives = 132/405 (32%), Gaps = 21/405 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
AAP +DV+ L T I + + G + +
Sbjct: 28 AAPGKGHNVTIENDVESHLHPTPSW---EIADHPMPTGREEIWRFTPIKTFIPVLSEVAL 84
Query: 150 EELKKSGVIFMPISEAI-CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKG 207
E +++G+I + + A DL L + + +AL +A V IP
Sbjct: 85 EPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAE 144
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + ++ + V+ +
Sbjct: 145 TSLKAPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIG 199
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
D A+ VQ W G + G + + Q G +
Sbjct: 200 DGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRICQTAS 251
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSV 386
G ++ Q I+ + H A +T S + +G G ++ + G V +
Sbjct: 252 YNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLI 311
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQR 445
A + +L++ C A +P +E + + H A+T + E LFY R
Sbjct: 312 RPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSR 371
Query: 446 GIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
G+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 372 GVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 416
>gi|108799404|ref|YP_639601.1| FeS assembly protein SufD [Mycobacterium sp. MCS]
gi|119868517|ref|YP_938469.1| FeS assembly protein SufD [Mycobacterium sp. KMS]
gi|108769823|gb|ABG08545.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. MCS]
gi|119694606|gb|ABL91679.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. KMS]
Length = 396
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 63/389 (16%), Positives = 125/389 (32%), Gaps = 31/389 (7%)
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
G + + E+ + V D V T + + A E +
Sbjct: 12 PAGSALNKGEVFTSFDVNAFEVPGGRDEVWRFTPLRRLRGLHDGSAVASGTARIEVSERP 71
Query: 174 KKYLSTVVPVGD---------NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
+ TV + + AA + F + V + + + +G
Sbjct: 72 GVTVETVQRGDERLGQGGVPADRVAAQAFSSFESATVVTVARDTVVADPIEITVAGPGEG 131
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
+ I +E + + + VE++ D A + + +W
Sbjct: 132 RVAYGHLQIRVEELAKAIVVVDLRGSGTYADN-----VEIIVGDAAGVGVIWLADWADDM 186
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
V+ G S + + G + + + ++
Sbjct: 187 VN--------VSAHHARLGKDSVLGHVNVMLGGDVVRTSATVRFTAPGGDAQMLGTYFAD 238
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFT 397
Q +++ + H N S ++ KG G ++ + G V + A + +
Sbjct: 239 DGQHLEARLLVDHAHPNCKSDVLYKGALQGDPNSDKPDAHTVWVGDVLIRAEATGTDTYE 298
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+L++ + A ++P +E + H + T + DE +FY RGIPEE A LI
Sbjct: 299 ANRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQMFYLQARGIPEEQARRLI 358
Query: 457 VNGFVREVLQKLPMEFAVE-AQKLIDISL 484
V GF E++ K+ + E I+ L
Sbjct: 359 VRGFFGEIISKIAVPAVRERLTDAIEREL 387
>gi|15840922|ref|NP_335959.1| hypothetical protein MT1509 [Mycobacterium tuberculosis CDC1551]
gi|31792656|ref|NP_855149.1| hypothetical protein Mb1497 [Mycobacterium bovis AF2122/97]
gi|121637392|ref|YP_977615.1| hypothetical protein BCG_1523 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148822681|ref|YP_001287435.1| hypothetical protein TBFG_11490 [Mycobacterium tuberculosis F11]
gi|215403315|ref|ZP_03415496.1| hypothetical protein Mtub0_06428 [Mycobacterium tuberculosis
02_1987]
gi|215411118|ref|ZP_03419926.1| hypothetical protein Mtub9_07275 [Mycobacterium tuberculosis
94_M4241A]
gi|215426800|ref|ZP_03424719.1| hypothetical protein MtubT9_10570 [Mycobacterium tuberculosis T92]
gi|215430354|ref|ZP_03428273.1| hypothetical protein MtubE_06701 [Mycobacterium tuberculosis
EAS054]
gi|215445655|ref|ZP_03432407.1| hypothetical protein MtubT_06809 [Mycobacterium tuberculosis T85]
gi|219557369|ref|ZP_03536445.1| hypothetical protein MtubT1_08722 [Mycobacterium tuberculosis T17]
gi|224989867|ref|YP_002644554.1| hypothetical protein JTY_1498 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799489|ref|YP_003032490.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN 1435]
gi|254231697|ref|ZP_04925024.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254550478|ref|ZP_05140925.1| FeS assembly protein SufD [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186407|ref|ZP_05763881.1| FeS assembly protein SufD [Mycobacterium tuberculosis CPHL_A]
gi|260200519|ref|ZP_05768010.1| FeS assembly protein SufD [Mycobacterium tuberculosis T46]
gi|260204744|ref|ZP_05772235.1| FeS assembly protein SufD [Mycobacterium tuberculosis K85]
gi|289442909|ref|ZP_06432653.1| FeS assembly protein SufD [Mycobacterium tuberculosis T46]
gi|289447064|ref|ZP_06436808.1| FeS assembly protein SufD [Mycobacterium tuberculosis CPHL_A]
gi|289554749|ref|ZP_06443959.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289569485|ref|ZP_06449712.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289574141|ref|ZP_06454368.1| FeS assembly protein SufD [Mycobacterium tuberculosis K85]
gi|289745212|ref|ZP_06504590.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289750022|ref|ZP_06509400.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289753544|ref|ZP_06512922.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289757571|ref|ZP_06516949.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|297634027|ref|ZP_06951807.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN 4207]
gi|297731013|ref|ZP_06960131.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN R506]
gi|298524969|ref|ZP_07012378.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306775649|ref|ZP_07413986.1| hypothetical protein TMAG_02790 [Mycobacterium tuberculosis
SUMu001]
gi|306779470|ref|ZP_07417807.1| hypothetical protein TMBG_00014 [Mycobacterium tuberculosis
SUMu002]
gi|306784200|ref|ZP_07422522.1| hypothetical protein TMCG_03574 [Mycobacterium tuberculosis
SUMu003]
gi|306788567|ref|ZP_07426889.1| hypothetical protein TMDG_03671 [Mycobacterium tuberculosis
SUMu004]
gi|306792910|ref|ZP_07431212.1| hypothetical protein TMEG_01365 [Mycobacterium tuberculosis
SUMu005]
gi|306797288|ref|ZP_07435590.1| hypothetical protein TMFG_00555 [Mycobacterium tuberculosis
SUMu006]
gi|306803169|ref|ZP_07439837.1| hypothetical protein TMHG_00651 [Mycobacterium tuberculosis
SUMu008]
gi|306807748|ref|ZP_07444416.1| hypothetical protein TMGG_00014 [Mycobacterium tuberculosis
SUMu007]
gi|306967568|ref|ZP_07480229.1| hypothetical protein TMIG_01722 [Mycobacterium tuberculosis
SUMu009]
gi|306971758|ref|ZP_07484419.1| hypothetical protein TMJG_02896 [Mycobacterium tuberculosis
SUMu010]
gi|307079478|ref|ZP_07488648.1| hypothetical protein TMKG_01969 [Mycobacterium tuberculosis
SUMu011]
gi|313658346|ref|ZP_07815226.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN V2475]
gi|38258684|sp|P59973|Y1497_MYCBO RecName: Full=UPF0051 protein Mb1497
gi|13881126|gb|AAK45773.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31618246|emb|CAD96164.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493039|emb|CAL71510.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600756|gb|EAY59766.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|148721208|gb|ABR05833.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772980|dbj|BAH25786.1| hypothetical protein JTY_1498 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320992|gb|ACT25595.1| FeS assembly protein SufD [Mycobacterium tuberculosis KZN 1435]
gi|289415828|gb|EFD13068.1| FeS assembly protein SufD [Mycobacterium tuberculosis T46]
gi|289420022|gb|EFD17223.1| FeS assembly protein SufD [Mycobacterium tuberculosis CPHL_A]
gi|289439381|gb|EFD21874.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289538572|gb|EFD43150.1| FeS assembly protein SufD [Mycobacterium tuberculosis K85]
gi|289543239|gb|EFD46887.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289685740|gb|EFD53228.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289690609|gb|EFD58038.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694131|gb|EFD61560.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289713135|gb|EFD77147.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298494763|gb|EFI30057.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308215873|gb|EFO75272.1| hypothetical protein TMAG_02790 [Mycobacterium tuberculosis
SUMu001]
gi|308327583|gb|EFP16434.1| hypothetical protein TMBG_00014 [Mycobacterium tuberculosis
SUMu002]
gi|308331047|gb|EFP19898.1| hypothetical protein TMCG_03574 [Mycobacterium tuberculosis
SUMu003]
gi|308334866|gb|EFP23717.1| hypothetical protein TMDG_03671 [Mycobacterium tuberculosis
SUMu004]
gi|308338656|gb|EFP27507.1| hypothetical protein TMEG_01365 [Mycobacterium tuberculosis
SUMu005]
gi|308342356|gb|EFP31207.1| hypothetical protein TMFG_00555 [Mycobacterium tuberculosis
SUMu006]
gi|308345852|gb|EFP34703.1| hypothetical protein TMGG_00014 [Mycobacterium tuberculosis
SUMu007]
gi|308350153|gb|EFP39004.1| hypothetical protein TMHG_00651 [Mycobacterium tuberculosis
SUMu008]
gi|308354791|gb|EFP43642.1| hypothetical protein TMIG_01722 [Mycobacterium tuberculosis
SUMu009]
gi|308358744|gb|EFP47595.1| hypothetical protein TMJG_02896 [Mycobacterium tuberculosis
SUMu010]
gi|308362672|gb|EFP51523.1| hypothetical protein TMKG_01969 [Mycobacterium tuberculosis
SUMu011]
gi|323720033|gb|EGB29144.1| hypothetical protein TMMG_00721 [Mycobacterium tuberculosis
CDC1551A]
gi|326903085|gb|EGE50018.1| hypothetical protein TBPG_00949 [Mycobacterium tuberculosis W-148]
gi|328459237|gb|AEB04660.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 397
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 66/393 (16%), Positives = 121/393 (30%), Gaps = 31/393 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T GI + E+ A V D + T + A
Sbjct: 7 TAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGSATITVS 66
Query: 171 DLVKKYLSTVVPVG---------DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
+ Y TV + AA + F + V + + + +
Sbjct: 67 ERPGVYTQTVRRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGP 126
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
+G + + +E + + VE V D A + + +W
Sbjct: 127 GEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADN-----VEFVVDDAARLTAVWIADWA 181
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
G + + + G + G E +
Sbjct: 182 DDTVHLS--------AHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLY 233
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSR 394
++ Q ++S + H + S ++ KG G ++ + G V + A +
Sbjct: 234 FADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTD 293
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
F +L++ + A ++P +E + H + T + DE LFY RGIPE A
Sbjct: 294 TFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQAR 353
Query: 454 ALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
L+V GF E++ K+ + E I+ LE
Sbjct: 354 RLVVRGFFGEIIAKIAVPEVRERLTAAIEHELE 386
>gi|15608600|ref|NP_215978.1| hypothetical protein Rv1462 [Mycobacterium tuberculosis H37Rv]
gi|148661254|ref|YP_001282777.1| hypothetical protein MRA_1471 [Mycobacterium tuberculosis H37Ra]
gi|167967412|ref|ZP_02549689.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|307084037|ref|ZP_07493150.1| hypothetical protein TMLG_00444 [Mycobacterium tuberculosis
SUMu012]
gi|6686195|sp|O53153|Y1462_MYCTU RecName: Full=UPF0051 protein Rv1462/MT1509
gi|2791396|emb|CAA15992.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505406|gb|ABQ73215.1| iron-regulated ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|308366321|gb|EFP55172.1| hypothetical protein TMLG_00444 [Mycobacterium tuberculosis
SUMu012]
Length = 397
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 66/393 (16%), Positives = 121/393 (30%), Gaps = 31/393 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T GI + E+ A V D + T + A
Sbjct: 7 TAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGSATITVS 66
Query: 171 DLVKKYLSTVVPVG---------DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
+ Y TV + AA + F + V + + + +
Sbjct: 67 ERPGVYTQTVRRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGP 126
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
+G + + +E + + VE V D A + + +W
Sbjct: 127 GEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADN-----VEFVVDDAARLTAVWIADWA 181
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
G + + + G + G E +
Sbjct: 182 DNTVHLS--------AHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLY 233
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSR 394
++ Q ++S + H + S ++ KG G ++ + G V + A +
Sbjct: 234 FADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTD 293
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
F +L++ + A ++P +E + H + T + DE LFY RGIPE A
Sbjct: 294 TFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQAR 353
Query: 454 ALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
L+V GF E++ K+ + E I+ LE
Sbjct: 354 RLVVRGFFGEIIAKIAVPEVRERLTAAIEHELE 386
>gi|314963721|gb|EFT07821.1| FeS assembly protein SufD [Propionibacterium acnes HL082PA1]
Length = 424
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/405 (17%), Positives = 132/405 (32%), Gaps = 21/405 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
AAP +DV+ L T I + + G + +
Sbjct: 28 AAPGKGHNVTIENDVESHLHPTPSW---EIADHPMPTGREEIWRFTPIKTFIPVLSEVAL 84
Query: 150 EELKKSGVIFMPISEAI-CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKG 207
E +++G+I + + A DL L + + +AL +A V IP
Sbjct: 85 EPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAE 144
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + ++ + V+ +
Sbjct: 145 TSLKAPVEVPVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIG 199
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
D A+ VQ W G + G + + Q G +
Sbjct: 200 DGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRICQTAS 251
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSV 386
G ++ Q I+ + H A +T S + +G G ++ + G V +
Sbjct: 252 YNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLI 311
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQR 445
A + +L++ C A +P +E + + H A+T + E LFY R
Sbjct: 312 RPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSR 371
Query: 446 GIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
G+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 372 GVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 416
>gi|118465589|ref|YP_882499.1| FeS assembly protein SufD [Mycobacterium avium 104]
gi|254775762|ref|ZP_05217278.1| FeS assembly protein SufD [Mycobacterium avium subsp. avium ATCC
25291]
gi|118166876|gb|ABK67773.1| FeS assembly protein SufD [Mycobacterium avium 104]
Length = 396
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 53/308 (17%), Positives = 107/308 (34%), Gaps = 22/308 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + + + + + + +G + I +E + +
Sbjct: 92 DRVAAQAFSSFNSATLITVQRDTQIAEPIGVTVTGPGEGAVAYGHLQIRVEELAEAVVVI 151
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE V D A + + +W V+ G
Sbjct: 152 DHRGSGTLADN-----VEFVVDDAARLTVVWLADWADDAVH--------VSMHHARLGKD 198
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + E + ++ Q ++S + H + S
Sbjct: 199 AVLRHVAVTLGGEVVRLTANVRYTSTGGDAELLGLYFADDGQHLESRLLVDHAQPDCKSN 258
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 259 VLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEI 318
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEA 476
+ H + T + DE LFY RGIPEE A L++ GF E++ K+ + E
Sbjct: 319 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERL 378
Query: 477 QKLIDISL 484
I+ L
Sbjct: 379 TAAIEHEL 386
>gi|117928343|ref|YP_872894.1| FeS assembly protein SufD [Acidothermus cellulolyticus 11B]
gi|117648806|gb|ABK52908.1| Iron-regulated ABC transporter permease protein SufD [Acidothermus
cellulolyticus 11B]
Length = 407
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 16/265 (6%)
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
G + L+ GS + + +AA VEL D + + + T+Q+W
Sbjct: 147 GGVSYGHLLVTTRPGSAGTVVLDHRGSG-----TYAANVELDVADGSSLTFVTIQDWDDD 201
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
V G +++ + G + P E + +
Sbjct: 202 AIH--------VAAHSARIGRDARLRHINVSFGGSAVRISPLVTFAAPGGDAELLGVFFA 253
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ Q ID+ + H A N SR+ +G G + + G V + A + + +L
Sbjct: 254 DAGQHIDARLMVDHSAPNCRSRVNYRGALQGEKARTVWVGDVIIRPQAVGTDTYEANRNL 313
Query: 403 LIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
L+ + A ++P +E H + T ++ DE LFY RGIP + A LIV GF
Sbjct: 314 LLTDGARADSVPNLEILTGEVIGAGHASATGRLDDEQLFYLQARGIPRDQARRLIVRGFF 373
Query: 462 REVLQKLPM-EFAVEAQKLIDISLE 485
+V++ + + E +D LE
Sbjct: 374 ADVIEDIGIPELVTRLLAHVDRELE 398
>gi|313773473|gb|EFS39439.1| FeS assembly protein SufD [Propionibacterium acnes HL074PA1]
gi|313811525|gb|EFS49239.1| FeS assembly protein SufD [Propionibacterium acnes HL083PA1]
gi|313831266|gb|EFS68980.1| FeS assembly protein SufD [Propionibacterium acnes HL007PA1]
gi|313834877|gb|EFS72591.1| FeS assembly protein SufD [Propionibacterium acnes HL056PA1]
gi|314974142|gb|EFT18238.1| FeS assembly protein SufD [Propionibacterium acnes HL053PA1]
gi|315095281|gb|EFT67257.1| FeS assembly protein SufD [Propionibacterium acnes HL038PA1]
gi|327444877|gb|EGE91531.1| FeS assembly protein SufD [Propionibacterium acnes HL043PA1]
Length = 366
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 58/324 (17%), Positives = 107/324 (33%), Gaps = 17/324 (5%)
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKGVRCPMELSTYFRINEKGTGQF 228
DL L + + +AL +A V IP + +
Sbjct: 48 TDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVAGHNDEIACH 107
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
++ + V+ + D A+ VQ W G
Sbjct: 108 HNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIGDGAQATVLFVQEWDDAAIHGA 162
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ G + + Q G + G ++ Q
Sbjct: 163 --------QVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQH 214
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
I+ + H A +T S + +G G ++ + G V + A + +L++
Sbjct: 215 IEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAKDIDTYESNKNLVLTEG 274
Query: 408 CGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
C A +P +E + + H A+T + E LFY RG+ E A L+V+GF ++++
Sbjct: 275 CRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVR 334
Query: 467 KLPM-EFAVEAQKLIDISLEGSVG 489
K+ + E + E I+ L S+G
Sbjct: 335 KIGVPEISEELVARIEAELVESLG 358
>gi|119386674|ref|YP_917729.1| SufBD protein [Paracoccus denitrificans PD1222]
gi|119377269|gb|ABL72033.1| SufBD protein [Paracoccus denitrificans PD1222]
Length = 448
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 73/421 (17%), Positives = 130/421 (30%), Gaps = 49/421 (11%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A +R M P R + D P + PE +
Sbjct: 44 REDAAQRLQAMGLP---GARDEYWRYTD------------PAPFNAARPEPVEFGADAST 88
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
E L + V VD FD+ + + L GV ++ A
Sbjct: 89 LFTGIERL-----NLVFVDGRFDAAA-----SDVLDVEGVEIESLAAAEAAADHWAAGLY 138
Query: 178 STV-----VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
+ VPV F A + + +R + + +
Sbjct: 139 GRLETAGQVPVKRPFAVLNTLAAAEGVLI---RVTGKVERPVHITYRRSAPDADVYLHHV 195
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ +EG+ ++ LE R V+E A + + + G G I+
Sbjct: 196 VKLEEGAELTLLESGAIGAR-----SNVVIEADLGRGARFHHISAKR-ANDPKLGLGHIF 249
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
V + L ++ + G+ + + + +G
Sbjct: 250 ARV-------AAEALFKSFSLSVNGSMMRNEAVIEIAGDDAVAHIAAAVLGDGDTGRFHH 302
Query: 353 T---KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H A+ SR V K + + ++GK+ V GA + + LL+
Sbjct: 303 DDTVFVTHAAERCESRQVFKKVLKNGAEGIFQGKILVKPGAQKTDGYQISQGLLLDEGSQ 362
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
P +E H +TT + + LFY RG+P+E AI L+V F+ + L ++
Sbjct: 363 FLAKPELEIYADDVKCSHGSTTGALDETALFYLRSRGVPKERAIVLLVLSFLADALDEIE 422
Query: 470 M 470
Sbjct: 423 D 423
>gi|145224260|ref|YP_001134938.1| FeS assembly protein SufD [Mycobacterium gilvum PYR-GCK]
gi|315444595|ref|YP_004077474.1| Iron-regulated ABC transporter permease SufD [Mycobacterium sp.
Spyr1]
gi|145216746|gb|ABP46150.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
gilvum PYR-GCK]
gi|315262898|gb|ADT99639.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. Spyr1]
Length = 399
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 63/386 (16%), Positives = 123/386 (31%), Gaps = 31/386 (8%)
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
+ + + E+ + + V D + T K P A +
Sbjct: 19 LNLNKGELFSSFDVNAFEVPGGRDELWRFTPLKRLRGLHDGSATPSGTAGITVTEREGVT 78
Query: 177 LSTVVPVG---------DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+ TV + AA + F + V + + + +
Sbjct: 79 VETVARGDARLGQAGVPSDRVAAQAFSSFESATVVTVARDTEVAEPIEIVIEGPGEYAVA 138
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+ I +E S + + VE++ D+A + + +W
Sbjct: 139 YGHLQIRVEELSRAIVVVDLRGSGVYADN-----VEIIVGDSAGLGLIWIADWADDTVH- 192
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
V+ G + + + G + + G + ++ Q
Sbjct: 193 -------VSSHHAKLGRDAVLGHVNVTLGGDVVRTTATVRYTGPGGEAKMLGTYFADDGQ 245
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCD 400
+S + H N S ++ KG G ++ + G V + A + F
Sbjct: 246 HFESRLLVDHSQPNCKSDVLYKGALQGDPDSRKPDAHTVWVGDVLIRAEATGTDTFEVNR 305
Query: 401 SLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+L++ + A ++P +E + H + T + DE LFY RGIPE A L+V G
Sbjct: 306 NLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRARGIPEAQARRLVVRG 365
Query: 460 FVREVLQKLPMEFAVE-AQKLIDISL 484
F E++ K+ + E I+ L
Sbjct: 366 FFNEIIAKIAVPAVRERLTDAIEREL 391
>gi|311742556|ref|ZP_07716365.1| FeS assembly protein SufD [Aeromicrobium marinum DSM 15272]
gi|311314184|gb|EFQ84092.1| FeS assembly protein SufD [Aeromicrobium marinum DSM 15272]
Length = 379
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 104/272 (38%), Gaps = 16/272 (5%)
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
R + + ++ + + + +AA V D A +
Sbjct: 118 ITLRGSAADQLVWGHVVVRIGAHARGTLVLDHLGSS-----TYAATTTYVVGDGAAVDVI 172
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+V +W G G + I + + G + + G
Sbjct: 173 SVHDWDDDAVHAGQN--------GITVGRDATIRFFEFSLGGDLVRTSTNVEYAGPGGTA 224
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSR 394
E + +++ Q I+ + H A T S ++ KG G + + G V + + A
Sbjct: 225 ELLGVYLADAGQHIEHRLFVDHTAPKTRSNVLYKGALQGQDAHTVWVGNVLIRKVAEGID 284
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAI 453
F Q D+L++ + A ++P +E + H +TT + D+HLFY RGIPE+ A
Sbjct: 285 TFEQNDNLILTDGATADSVPNLEIETGEIAGAGHASTTGRFDDQHLFYLQSRGIPEDEAR 344
Query: 454 ALIVNGFVREVLQKLPME-FAVEAQKLIDISL 484
L+V GF ++++++ +E A ++ L
Sbjct: 345 RLVVRGFFHDIIRRIHVEDLAERLVAAVEEEL 376
>gi|184200873|ref|YP_001855080.1| putative iron-sulfur cluster assembly protein SufD [Kocuria
rhizophila DC2201]
gi|183581103|dbj|BAG29574.1| putative iron-sulfur cluster assembly protein SufD [Kocuria
rhizophila DC2201]
Length = 401
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 114/314 (36%), Gaps = 18/314 (5%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ + D A S+ + + + +P+ + + E + ++
Sbjct: 98 DPRVGSAGIPEDRVSANAWSSF-REATVISVPRDAQVAEPV-IVTLTGESEEPAAQHIVV 155
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A S + + + VE D A + ++Q W
Sbjct: 156 DAGSNSKALVVLRHVGTA-----VLSQNVEFSVADGANLTVVSLQEWTDDSVHASS---- 206
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G + + G + PS E Y + + Q ++S
Sbjct: 207 ----QQATLGRDATFKHVLVSLGGDLVRVTPSTRFTAPGGDVEMYGLTFVDDGQHLESRL 262
Query: 354 KMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H SR+ K G ++ + G V + A + + +L++ + +
Sbjct: 263 FVDHSVPRCRSRVNYKSALQGENAHGVWVGDVLIRAEAEGTDTYELNRNLILNDGPRMDS 322
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P +E + H +TT ++ DEHL+Y + RGIPE+ A L+V GF+ E++Q++ +E
Sbjct: 323 VPNLEIETGLIAGAGHASTTGQLDDEHLYYLMSRGIPEDQARRLVVRGFLFEIIQQVGVE 382
Query: 472 FAVE-AQKLIDISL 484
E + ++ L
Sbjct: 383 ALEEQLRASLEAEL 396
>gi|118617468|ref|YP_905800.1| hypothetical protein MUL_1863 [Mycobacterium ulcerans Agy99]
gi|118569578|gb|ABL04329.1| conserved protein [Mycobacterium ulcerans Agy99]
Length = 399
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 106/309 (34%), Gaps = 22/309 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + + ++ KG + I +E +
Sbjct: 88 DRVAAQAFSSFNSATLVTVGRDTQLGEPVNITITGPGKGAVAYGHLQIRVEELGEAVVVV 147
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VE V D A + + +W G
Sbjct: 148 DHRGSGTYADN-----VEFVVGDCARLTVVWIADWADDTVHLS--------AHHAKLGKD 194
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + + + ++ Q ++S + H + S
Sbjct: 195 AVLRHVTVTLGGEVVRMSANVRFTAPGGDADLLGLYFADDGQHLESRLLVDHAQPDCKSN 254
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 255 VLYKGALQGDPGSALPDAHTVWVGDVLIRAAATGTDTFEVNRNLVLTDGARADSVPNLEI 314
Query: 419 KNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-A 476
+ H + T + DE LFY RGIPEE A L++ GF E++ K+ + E
Sbjct: 315 ETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFGEIISKIAVPEVRERL 374
Query: 477 QKLIDISLE 485
I+ LE
Sbjct: 375 TGAIEHELE 383
>gi|313763534|gb|EFS34898.1| FeS assembly protein SufD [Propionibacterium acnes HL013PA1]
gi|313801314|gb|EFS42565.1| FeS assembly protein SufD [Propionibacterium acnes HL110PA2]
gi|313816716|gb|EFS54430.1| FeS assembly protein SufD [Propionibacterium acnes HL059PA1]
gi|313822103|gb|EFS59817.1| FeS assembly protein SufD [Propionibacterium acnes HL036PA1]
gi|314914690|gb|EFS78521.1| FeS assembly protein SufD [Propionibacterium acnes HL005PA4]
gi|314920741|gb|EFS84572.1| FeS assembly protein SufD [Propionibacterium acnes HL050PA3]
gi|314924686|gb|EFS88517.1| FeS assembly protein SufD [Propionibacterium acnes HL036PA3]
gi|314930621|gb|EFS94452.1| FeS assembly protein SufD [Propionibacterium acnes HL067PA1]
gi|314957493|gb|EFT01596.1| FeS assembly protein SufD [Propionibacterium acnes HL002PA1]
gi|314968451|gb|EFT12549.1| FeS assembly protein SufD [Propionibacterium acnes HL037PA1]
gi|314978977|gb|EFT23071.1| FeS assembly protein SufD [Propionibacterium acnes HL072PA2]
gi|315081201|gb|EFT53177.1| FeS assembly protein SufD [Propionibacterium acnes HL078PA1]
gi|315083567|gb|EFT55543.1| FeS assembly protein SufD [Propionibacterium acnes HL027PA2]
gi|315087085|gb|EFT59061.1| FeS assembly protein SufD [Propionibacterium acnes HL002PA3]
gi|315089259|gb|EFT61235.1| FeS assembly protein SufD [Propionibacterium acnes HL072PA1]
gi|315099162|gb|EFT71138.1| FeS assembly protein SufD [Propionibacterium acnes HL059PA2]
gi|315108961|gb|EFT80937.1| FeS assembly protein SufD [Propionibacterium acnes HL030PA2]
gi|327329678|gb|EGE71434.1| FeS assembly protein SufD [Propionibacterium acnes HL096PA3]
gi|327446363|gb|EGE93017.1| FeS assembly protein SufD [Propionibacterium acnes HL013PA2]
gi|327454913|gb|EGF01568.1| FeS assembly protein SufD [Propionibacterium acnes HL087PA3]
gi|328752353|gb|EGF65969.1| FeS assembly protein SufD [Propionibacterium acnes HL020PA1]
gi|328758267|gb|EGF71883.1| FeS assembly protein SufD [Propionibacterium acnes HL025PA2]
Length = 366
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 58/324 (17%), Positives = 107/324 (33%), Gaps = 17/324 (5%)
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKGVRCPMELSTYFRINEKGTGQF 228
DL L + + +AL +A V IP + +
Sbjct: 48 TDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVAGHNDEIACH 107
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
++ + V+ + D A+ VQ W G
Sbjct: 108 HNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIGDGAQATVLFVQEWDDAAIHGA 162
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ G + + Q G + G ++ Q
Sbjct: 163 --------QVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQH 214
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
I+ + H A +T S + +G G ++ + G V + A + +L++
Sbjct: 215 IEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEG 274
Query: 408 CGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
C A +P +E + + H A+T + E LFY RG+ E A L+V+GF ++++
Sbjct: 275 CRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVR 334
Query: 467 KLPM-EFAVEAQKLIDISLEGSVG 489
K+ + E + E I+ L S+G
Sbjct: 335 KIGVPEISEELVARIEAELVESLG 358
>gi|289426458|ref|ZP_06428201.1| FeS assembly protein SufD [Propionibacterium acnes SK187]
gi|289153186|gb|EFD01904.1| FeS assembly protein SufD [Propionibacterium acnes SK187]
Length = 402
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/405 (17%), Positives = 133/405 (32%), Gaps = 21/405 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
AAP +DV+ L T I + + G + +
Sbjct: 6 AAPGKGHNVTIENDVESHLHPTPSW---EIADHPMPTGREEIWRFTPIKTFIPVLSEVAL 62
Query: 150 EELKKSGVIFMPISEAI-CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKG 207
E +++G+I + + A DL L + + +AL +A V IP
Sbjct: 63 EPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAE 122
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + + ++ + V+ +
Sbjct: 123 TSLKVPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIG 177
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
D A+ VQ W G + G + + Q G +
Sbjct: 178 DGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRICQTAS 229
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSV 386
G ++ Q I+ + H A +T S + +G G ++ + G V +
Sbjct: 230 YNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLI 289
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQR 445
A + +L++ C A +P +E + + H A+T + E LFY R
Sbjct: 290 RPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSR 349
Query: 446 GIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
G+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 350 GVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 394
>gi|329943893|ref|ZP_08292163.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328531532|gb|EGF58371.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 423
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 68/385 (17%), Positives = 128/385 (33%), Gaps = 25/385 (6%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+++ IP+ T +FD +V + + + I + E
Sbjct: 34 SFDPADIPVPRGREEEWRFTPMKRFAPLFDLDTVRAATAAGEANADIAAVRIETDLPEGA 93
Query: 171 DLV-----KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
L + V D +A G+ + + GV+ +
Sbjct: 94 RLETVPRSDPRIGAVGAPVDRTGVIAWNA-AETGTVLTVEAGVQLERAARLAVIGQDPEL 152
Query: 226 --GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
+ L+ A+ GS + + VE+ D AE+ TVQ W
Sbjct: 153 TRPAAQHILVAAESGSKGTVVLDHIGTAALTQG-----VEVTVADGAELTLVTVQGWEDA 207
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
R + + P GE + Y + +
Sbjct: 208 AVHASN--------HRVKVSGRGVLKHVVVSL-GGDVRICPDLGYSGEGGHIDAYGVYFT 258
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ Q + + H + SR+ KG G ++ + G + + A + + +L
Sbjct: 259 DAGQHQEHRPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNRNL 318
Query: 403 LIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
++ A ++P +E +N + H + T + D+ LFY RGIPE A L+V GF
Sbjct: 319 VLTEGAKADSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLGFF 378
Query: 462 REVLQKLPMEFAVE-AQKLIDISLE 485
E++ ++ ++ E I+ LE
Sbjct: 379 NEIVAEIGVDEVEERLMAAIEKELE 403
>gi|126435057|ref|YP_001070748.1| FeS assembly protein SufD [Mycobacterium sp. JLS]
gi|126234857|gb|ABN98257.1| Iron-regulated ABC transporter permease protein SufD [Mycobacterium
sp. JLS]
Length = 397
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 62/389 (15%), Positives = 125/389 (32%), Gaps = 31/389 (7%)
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
G + + E+ + V D + T + + A E +
Sbjct: 13 PAGSALNKGEVFTSFDVNAFEVPGGRDEIWRFTPLRRLRGLHDGSAVASGTARIEVSERP 72
Query: 174 KKYLSTVVPVGD---------NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
+ TV + + AA + F + V + + + +G
Sbjct: 73 GVTVETVQRGDERLGQGGVPADRVAAQAFSSFESATVVTVARDTVVADPIEITVAGPGEG 132
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
+ I +E + + + VE++ D A + + +W
Sbjct: 133 RVAYGHLQIRVEELAKAIVVVDLRGSGTYADN-----VEIIVGDAAGVGVIWLADWADDM 187
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
V+ G S + + G + + + ++
Sbjct: 188 VN--------VSAHHARLGKDSVLGHVNVMLGGDVVRTSATVRFTAPGGDAQMLGTYFAD 239
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFT 397
Q +++ + H N S ++ KG G ++ + G V + A + +
Sbjct: 240 DGQHLEARLLVDHAHPNCKSDVLYKGALQGDPNSDKPDAHTVWVGDVLIRAEATGTDTYE 299
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+L++ + A ++P +E + H + T + DE +FY RGIPEE A LI
Sbjct: 300 ANRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQMFYLQARGIPEEQARRLI 359
Query: 457 VNGFVREVLQKLPMEFAVE-AQKLIDISL 484
V GF E++ K+ + E I+ L
Sbjct: 360 VRGFFGEIISKIAVPAVRERLTDAIEREL 388
>gi|294995015|ref|ZP_06800706.1| FeS assembly protein SufD [Mycobacterium tuberculosis 210]
Length = 397
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 66/393 (16%), Positives = 121/393 (30%), Gaps = 31/393 (7%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
T GI + E+ A V D + T + A
Sbjct: 7 TAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGSATITVS 66
Query: 171 DLVKKYLSTVVPVG---------DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
+ Y TV + AA + F + V + + + +
Sbjct: 67 ERPGVYTQTVRRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGP 126
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
+G + + +E + + VE V D A + + +W
Sbjct: 127 GEGPVAYGHLQVRIEELGEAVVVIDHRGGGTYADN-----VEFVVDDAARLTAVWIADWA 181
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
G + + + G + G E +
Sbjct: 182 DDTVHLS--------AHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLY 233
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSR 394
++ Q ++S + H + S ++ KG G ++ + G V + A +
Sbjct: 234 FADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTD 293
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
F +L++ + A ++P +E + H + T + DE LFY RGIPE A
Sbjct: 294 TFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQAR 353
Query: 454 ALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
L+V GF E++ K+ + E I+ LE
Sbjct: 354 RLVVRGFFGEIIAKIAVPEVRERLTAAIEHELE 386
>gi|258627394|ref|ZP_05722176.1| Protein sufD [Vibrio mimicus VM603]
gi|258580317|gb|EEW05284.1| Protein sufD [Vibrio mimicus VM603]
Length = 417
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 66/410 (16%), Positives = 127/410 (30%), Gaps = 40/410 (9%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
+W+ ++ + + P R + L +A + + PE L +
Sbjct: 23 TQWQQQSWAQLQEIGLPK---ERDEGWKYTSLNEFALLSFQAADKQP--LTPETLAWLSQ 77
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
E L + ++ + VI I +
Sbjct: 78 F-----EGYRLVFSNGAWLSEWSD------------------VIPGVTITPIELWNEQQL 114
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQFERTLI 233
K ++ V +A L A G + + + + G R +
Sbjct: 115 KQVNQSV--QGEAFALLTDATANAGIHLAVSREFVADKPIYLLHVQTANRGVLCSYRHHL 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ E + + + + V + A+++++ V
Sbjct: 173 ELARLTQCQLYEHY-FSFDESHGVTCSRVSANVAEGAQLEHAKVIEEGSQQHHFAHN--- 228
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
S+ + + S LL G + + +S+++ DS T
Sbjct: 229 -----DLRLTRDSQAQSHSFLLRGQLMRQQTSTLLAGTGAEVQMHSLSLPEANTTSDSRT 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A + S K I+ SN + G + V +GA + +LL+GN+ ++
Sbjct: 284 FLRHQAAHCRSYQSHKVIAKEESNAVFHGLILVDKGALKTDGQMDNHNLLLGNHSQVNSQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
P +E H ATT +I E LFY RGI A+ ++ F E
Sbjct: 344 PQLEIYADDVKCSHGATTGQIDPEQLFYLQARGIERAKALHMLTYAFAGE 393
>gi|289428695|ref|ZP_06430378.1| FeS assembly protein SufD [Propionibacterium acnes J165]
gi|295131097|ref|YP_003581760.1| FeS assembly protein SufD [Propionibacterium acnes SK137]
gi|289158093|gb|EFD06313.1| FeS assembly protein SufD [Propionibacterium acnes J165]
gi|291376425|gb|ADE00280.1| FeS assembly protein SufD [Propionibacterium acnes SK137]
gi|332675976|gb|AEE72792.1| conserved hypothetical protein [Propionibacterium acnes 266]
Length = 402
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/405 (17%), Positives = 132/405 (32%), Gaps = 21/405 (5%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
AAP +DV+ L T I + + G + +
Sbjct: 6 AAPGKGHNVTIENDVESHLHPTPSW---EIADHPMPTGREEIWRFTPIKTFIPVLSEVAL 62
Query: 150 EELKKSGVIFMPISEAI-CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKG 207
E +++G+I + + A DL L + + +AL +A V IP
Sbjct: 63 EPRQEAGIIDVDVKRADGITVTDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAE 122
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + ++ + V+ +
Sbjct: 123 TSLKAPVEVTVAGHNDEIACHHNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIG 177
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
D A+ VQ W G + G + + Q G +
Sbjct: 178 DGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRICQTAS 229
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSV 386
G ++ Q I+ + H A +T S + +G G ++ + G V +
Sbjct: 230 YNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLI 289
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQR 445
A + +L++ C A +P +E + + H A+T + E LFY R
Sbjct: 290 RPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSR 349
Query: 446 GIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
G+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 350 GVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 394
>gi|58581026|ref|YP_200042.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84622943|ref|YP_450315.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577998|ref|YP_001914927.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58425620|gb|AAW74657.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84366883|dbj|BAE68041.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522450|gb|ACD60395.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 420
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 79/435 (18%), Positives = 152/435 (34%), Gaps = 38/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DTRRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPTLVDAAALD 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP + G + ++ + + T L +A ++
Sbjct: 68 DIPSPRLVFVNGRPSEALSDLSTLPDGVQLDTLSASLA-------ASDDA--------QQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
L D +A LN+A+ +G V + G + + L F R LI
Sbjct: 113 LLGRRFDGSDEVFARLNAALADEGMVVRVRDGAQIELPLHLVFVSMAGEHDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + +A + ++ +Q +
Sbjct: 173 ELRAGAALQLVEHHL-HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHATS------- 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 225 -LLRTDAVLARNARYQRVDLELGAGLSRHELNVRLEGSNAQLTANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N T
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSSKNLLLSSNAEIDTQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP A
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRARGLPQEQAQRLLSAAFCHEPLRVLP---A 400
Query: 474 VEAQKLIDISLEGSV 488
V ++ + L+ ++
Sbjct: 401 V-LSAVLALQLDRAL 414
>gi|224138876|ref|XP_002326712.1| predicted protein [Populus trichocarpa]
gi|222834034|gb|EEE72511.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats.
Identities = 80/426 (18%), Positives = 148/426 (34%), Gaps = 44/426 (10%)
Query: 73 WARIRYPAIDFDD--LYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
W + F D + I P LD + T +
Sbjct: 61 WPSRKDEPFRFTDTSFIRLSQIVPITKPPQLDYLPSINEDTLLPSIV------------- 107
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
+A V +S+S ++T + + ++ + V + + + +
Sbjct: 108 --IADGFVLNSMSKLSTLPDGVYVGSLLSDSSDRIAERVLEFVGDFEW------GDLFWS 159
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT-------GQFERTLIIADEGSYVSY 243
+N D + VY+P GV+ + + E G R ++ +EG V
Sbjct: 160 INGLGAHDMTVVYVPAGVKVENPIHFKYVSVEGGEKGSKKLPVSNPRVFVVVEEGGEVGI 219
Query: 244 LEGCTAP--QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
+E + D V+E+V A++++S VQ+ + K
Sbjct: 220 IEEFVSKEGNDDRYYWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTA--------VR 271
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ S ++ TG ++ G + E + +S G Q D ++++
Sbjct: 272 QEAASTYELVEVSTGGKLSRHNLHVQQLGPDTATELSTFHLSVGDQTQDLHSRLILDHPR 331
Query: 362 TTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
S+ + K I A + G V V+R A + SLL+ + P ++
Sbjct: 332 GRSQQLHKCIVAHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIA 391
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
H A S + + LFY RGI E A +V F EV+++LP F QK +
Sbjct: 392 DDVKCSHGAAISDLEETQLFYFQARGIDLETARKALVFSFGAEVIERLPNSF---MQKQV 448
Query: 481 DISLEG 486
+ ++G
Sbjct: 449 ESHVKG 454
>gi|311064206|ref|YP_003970931.1| ABC transporter ATP-binding protein [Bifidobacterium bifidum
PRL2010]
gi|310866525|gb|ADP35894.1| ATP-binding protein of ABC transporter system [Bifidobacterium
bifidum PRL2010]
Length = 409
Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats.
Identities = 77/406 (18%), Positives = 140/406 (34%), Gaps = 38/406 (9%)
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
YA P ++ + R+++ E++ T + FD
Sbjct: 18 PYAVPAAMPSSADRE------PRSFDMNDFAAPERKQDDWRYTPLDRIGEFFD------V 65
Query: 148 FKEELKKSGVIFMPISEAICEHP------DLVKKYLSTVVPVGDNFYAALNSAVFTDGSF 201
FK + + VI A+ E L + TV D A ++ T
Sbjct: 66 FKPSGETTIVISYADGTAVDEKHVAVSQCALGEGVSGTVSKPSDRAAAVEWNSGRTATVI 125
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ + I +I + ++ + R
Sbjct: 126 ELSGEIAQ----PVLVNVIGSGDDLDALHLVISTADEAHADIIVEHHGLARLAEG----- 176
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
VE+V N+ + + VQ W G V + G + + + + G +
Sbjct: 177 VEIVTGKNSHVSTTFVQEWEKGSKH--------VGNQRIHVGEGASLRHSVVTLGGDVVR 228
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTY 380
GEQ I + + I+ T ++H SR+V KG G ++T+
Sbjct: 229 IRMDQDFGGEQGDLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKDAHSTW 288
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHL 439
G + A + ++ +L++ A + P +E +N + H ++ + DE L
Sbjct: 289 VGNALIAPTALGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEEL 348
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISL 484
FY RGIPE A L+V GF E+++++ + F E +ID L
Sbjct: 349 FYLQSRGIPETEARKLVVRGFFGELVEEIGVPFIAEHLMNVIDRRL 394
>gi|303277771|ref|XP_003058179.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226460836|gb|EEH58130.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 492
Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats.
Identities = 54/291 (18%), Positives = 101/291 (34%), Gaps = 18/291 (6%)
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSY 243
A+LN+ + +D V +P GV + + + R +I E + V
Sbjct: 184 ASLNAVMASDFVHVDVPAGVTLDVPIHIVQLSTSGDDAAELSSSAPRIVITVGERASVEV 243
Query: 244 LEGCTA----PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+E H V E+V + + ++ VQ +
Sbjct: 244 VEEFAPAPGVSDDACGYWHNGVCEIVIEKDGRVTHAMVQAQTRNAVHTRLTTLT------ 297
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ S + ++ G I G ++ E ++ Q +D + +
Sbjct: 298 --QAESSTYALAEVNVGGKIGRHDLGIEQLGPRTVTELSCFNLAGAGQCMDLHSSVTLDH 355
Query: 360 KNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+ + V K I + + G V V++ A + +LL+ + P ++
Sbjct: 356 EEGKTDQVHKCIVSSASGRGVFDGNVKVNKLAQRTDAGQISRNLLLVPKATVNVKPNLQI 415
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H T S + +E LFY RG+ A +L+V GF E++ KLP
Sbjct: 416 VADDVVCTHGCTVSDLEEEELFYIQSRGLSPAVARSLLVAGFGLEIVSKLP 466
>gi|227496300|ref|ZP_03926596.1| FeS assembly protein [Actinomyces urogenitalis DSM 15434]
gi|226834169|gb|EEH66552.1| FeS assembly protein [Actinomyces urogenitalis DSM 15434]
Length = 445
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 72/388 (18%), Positives = 121/388 (31%), Gaps = 24/388 (6%)
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
+ +++ IP+ T +FD +V V
Sbjct: 60 ADRPTSFDPADIPVPRGREEEWRFTPMKRFRPLFDLEAVRAG--SATDSVTVAVDAPQGV 117
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
E + + L TV D +A T + + G
Sbjct: 118 DVESLERTDERLGTVGAPVDRTGVVAWAAFETATAVTLQAGAQLERAVRVSVTGHEVPGE 177
Query: 226 GQFERT-----LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
F LI A +GS + + T VE+V AE+ T+QNW
Sbjct: 178 EGFAHPAAGHLLITAQKGSRGTVVLDHTGTAAYTQG-----VEVVVAPEAELTLVTIQNW 232
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
R + + GE E Y +
Sbjct: 233 DDAAVHASN--------HRVRVEGRGTLKHVVVSL-GGDVRISSDLGFAGEGGRTEAYGV 283
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQC 399
++ Q + + H + SR+ KG G ++ + G + A + +
Sbjct: 284 YFTDAGQHQEHRPYVAHTEPHCYSRVTYKGALQGENAHAVWVGDCLIGAAARGTDTYELN 343
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
+L++ A +IP +E +N + H + T + D LFY RGIPE A L+V
Sbjct: 344 RNLVLTEGAKADSIPNLEIENGNIEGAGHASATGRFDDHQLFYLRARGIPEAEARRLVVL 403
Query: 459 GFVREVLQKLPMEFAVE-AQKLIDISLE 485
GF E++ ++ + E I+ LE
Sbjct: 404 GFFNEIVAEIGVPEVEETLMGAIEKELE 431
>gi|297626659|ref|YP_003688422.1| FeS assembly protein SufD [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922424|emb|CBL56996.1| FeS assembly protein SufD [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 405
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 58/307 (18%), Positives = 113/307 (36%), Gaps = 16/307 (5%)
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
V + +A+ A + + +P V L R G +++ +I +
Sbjct: 101 VEPPADRSSAIAVAQSDEARLIRVPADVELDEPLELDVRGTGVGRLAYQQLIIEVGTNAR 160
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+ + +++ D A + VQ+W P +
Sbjct: 161 AQIVFRFEGSAALAEK-----IDIRIGDGARVDVIMVQDWAPDTLHAA--------QVSL 207
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
G + + Q G A+T E Y + +G + ++ + H
Sbjct: 208 LVGRDAHVRTVQASLGGAVTRVLERASYAAPGGELEQYGLYFVDGGRHVEHRMFIDHNQP 267
Query: 361 NTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
T S + +G G S++ + G V + + A + +LL+ A +IP +E +
Sbjct: 268 RTRSNVDYRGAIQGEGSHSVWVGDVLIRKIAHEIETYEANKNLLLSRGARADSIPNLEIE 327
Query: 420 NSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQ 477
+ H +TT + DE LFY RGIP + A L+V+GF ++++ + + E
Sbjct: 328 TGNIVGAGHSSTTGRFDDEQLFYLESRGIPNDEARRLVVHGFFVDIVRHIGVPEVEERLM 387
Query: 478 KLIDISL 484
K ++ L
Sbjct: 388 KAVEREL 394
>gi|159184935|ref|NP_354806.2| transport system [Agrobacterium tumefaciens str. C58]
gi|159140213|gb|AAK87591.2| transport system [Agrobacterium tumefaciens str. C58]
Length = 423
Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats.
Identities = 74/399 (18%), Positives = 129/399 (32%), Gaps = 45/399 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ T P+ R A + DL DD ++ L
Sbjct: 41 FDDLKTGGLPT---RRIEAWHYTDLKTLLR-------AIPDDQPAPVIDKQASLVAGSPV 90
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+L G D S F E L G ++EA
Sbjct: 91 AYVLHGTANIGKIEDISVSS------FAESLLD-GTAATGLAEA---------------- 127
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
D+ +N + DG + IP + R + +GS
Sbjct: 128 -SKDDVIGRINGSFVRDGLTLDIPADAEIEKPIELQAIHGAGQV--HSRFPVRFGKGSKA 184
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
+ +E + L ++V ++V D AE+ + +Q D +
Sbjct: 185 TVIERHL-SVTSDAALVSSVSDIVVEDGAEVTWIILQQQGAADIHLG--------QLRMK 235
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G +K+ + G + + + GE + + + G D + H N
Sbjct: 236 IGADAKVRLFVINAGGKLVRQELRIDVDGEGTDLIVRGVNLLGGETHTDVTMVLGHNVPN 295
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
TTS V + + + ++G + V A + C++LL+ ++ P +E
Sbjct: 296 TTSAEVFRNVVFDRAKGIFQGMIRVAPDAQKTDAKMACNTLLMSDDGEFSAKPELEIFAD 355
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
H AT + I D HL+Y + RG+P A A++VN F
Sbjct: 356 DVQCGHGATVADIDDNHLYYLMARGVPRAKARAMLVNAF 394
>gi|50843024|ref|YP_056251.1| hypothetical protein PPA1548 [Propionibacterium acnes KPA171202]
gi|50840626|gb|AAT83293.1| conserved protein, UPF0051 [Propionibacterium acnes KPA171202]
gi|314923799|gb|EFS87630.1| FeS assembly protein SufD [Propionibacterium acnes HL001PA1]
gi|327328143|gb|EGE69912.1| FeS assembly protein SufD [Propionibacterium acnes HL103PA1]
Length = 424
Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats.
Identities = 51/289 (17%), Positives = 96/289 (33%), Gaps = 16/289 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
IP + + ++ + V+ +
Sbjct: 141 IPAETSLKAPVEVTVAGHNDDIACHHNVVVEIGNHAEVTVIVRHRGVANLGENWT----- 195
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
D A+ VQ W G + G + + Q G
Sbjct: 196 FRIGDGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRIC 247
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRG 382
+ G ++ Q I+ + H A +T S + +G G ++ + G
Sbjct: 248 QTASYNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIG 307
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFY 441
V + A + +L++ C A +P +E + + H A+T + E LFY
Sbjct: 308 DVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFY 367
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
RG+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 368 LQSRGVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 416
>gi|314966187|gb|EFT10286.1| FeS assembly protein SufD [Propionibacterium acnes HL082PA2]
gi|314981954|gb|EFT26047.1| FeS assembly protein SufD [Propionibacterium acnes HL110PA3]
gi|315090866|gb|EFT62842.1| FeS assembly protein SufD [Propionibacterium acnes HL110PA4]
gi|315095077|gb|EFT67053.1| FeS assembly protein SufD [Propionibacterium acnes HL060PA1]
gi|315104309|gb|EFT76285.1| FeS assembly protein SufD [Propionibacterium acnes HL050PA2]
gi|315106831|gb|EFT78807.1| FeS assembly protein SufD [Propionibacterium acnes HL030PA1]
Length = 366
Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats.
Identities = 51/289 (17%), Positives = 96/289 (33%), Gaps = 16/289 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
IP + + ++ + V+ +
Sbjct: 83 IPAETSLKAPVEVTVAGHNDDIACHHNVVVEIGNHAEVTVIVRHRGVANLGENWT----- 137
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
D A+ VQ W G + G + + Q G
Sbjct: 138 FRIGDGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRIC 189
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRG 382
+ G ++ Q I+ + H A +T S + +G G ++ + G
Sbjct: 190 QTASYNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIG 249
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFY 441
V + A + +L++ C A +P +E + + H A+T + E LFY
Sbjct: 250 DVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFY 309
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
RG+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 310 LQSRGVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 358
>gi|261337345|ref|ZP_05965229.1| FeS assembly protein SufD [Bifidobacterium gallicum DSM 20093]
gi|270277721|gb|EFA23575.1| FeS assembly protein SufD [Bifidobacterium gallicum DSM 20093]
Length = 409
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 63/360 (17%), Positives = 121/360 (33%), Gaps = 21/360 (5%)
Query: 111 TYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
+ + +P R+Q+ ++ V + S T K + EA E
Sbjct: 36 SLDDFAVPSRKQDDFRFTPVDRINEFFVPFTASGRTHVTISDMKGHKLDAAKVEATRE-- 93
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
+ ++Y V D +A E
Sbjct: 94 AMGERYSGKVSKPNDRPSVVQWNASAEAVIVHIKHDL----DEPVLVKVEGSGMDMDALH 149
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+I AD + + + VE+ ++++I + VQ W G
Sbjct: 150 LVIHADANVHADVVVQHSGMAMLAEG-----VEITTGEDSQISTTFVQEWQAGSKH---- 200
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
V G + + + G + G+ I + + I+
Sbjct: 201 ----VGNHRIHVGKGASLRHAVVTLGGDVVRIRMDQDFGGDHGDVNMLGIYFVDPGEHIE 256
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
T ++H + SR+V KG +G ++T+ G + A + ++ +L++
Sbjct: 257 HRTMVVHNEPDCKSRVVYKGALSGKGAHSTWVGNALIEPTAPGTDSYELNRNLVLTPGAI 316
Query: 410 AHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A + P +E +N H ++ + DE LFY RGI E A L+V GF E+++++
Sbjct: 317 ADSEPNLEIENGDIIGAGHASSVGRFDDEELFYLQSRGISEREARKLVVRGFFAELIEEI 376
>gi|317133536|ref|YP_004092850.1| FeS assembly protein SufD [Ethanoligenens harbinense YUAN-3]
gi|315471515|gb|ADU28119.1| FeS assembly protein SufD [Ethanoligenens harbinense YUAN-3]
Length = 368
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 83/364 (22%), Positives = 139/364 (38%), Gaps = 17/364 (4%)
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
GV + + + + E L + GV SE + ++ + T
Sbjct: 20 GVNGETLETEIPDVTPFSAFSLPEHLPE-GVKV---SEVLKSDIVFLEGDIDTGAGP--- 72
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
A G FV + GV+ L + ++ + +IA+ GS V+ +
Sbjct: 73 QVRDFVKANHNAGVFVEVKPGVQVAEPLVFDYTLDATNPVLADENTVIAEPGSSVTVVLR 132
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
T+ N HA + L A +A+I VQ G
Sbjct: 133 YTSAAD-LNGFHAGLTRLYAKKDAKITLVQVQVLGKNCPHFSD--------VGGTAFEDG 183
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
+I TQ E G + + L G++S + SI + +G + ID H + + S I
Sbjct: 184 RIELTQAELGGSRAYAAAKFKLTGDRSHTDIGSIYLGDGARNIDINYVAEHYGEKSVSEI 243
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+S+G S +RG + RGAA S+ + ++L+ A + P I + +
Sbjct: 244 LSRGAMLDKSQKIFRGTIDFKRGAAGSKGHEEEYAVLLSPKVRARSAPLILCDEEDVDGQ 303
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDISLE 485
H A+T +I + LFY + RG+ E A LIV +L ++P+ + Q I L
Sbjct: 304 HAASTGRIDENRLFYLMSRGLSEADARRLIVEAQFAPILDRIPVASIRNDLQNHIIGRLN 363
Query: 486 GSVG 489
VG
Sbjct: 364 EHVG 367
>gi|121489751|emb|CAK18847.1| ABC transporter precursor [Phillyrea latifolia]
Length = 199
Score = 183 bits (465), Expect = 5e-44, Method: Composition-based stats.
Identities = 142/199 (71%), Positives = 161/199 (80%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
VF+DGSFVYIPK +CPM +STYFRIN TGQFERTLI+ADEGS+ YLEGCTAP D
Sbjct: 1 VFSDGSFVYIPKNTKCPMPISTYFRINAMETGQFERTLIVADEGSFAEYLEGCTAPSYDT 60
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
NQLHAAVVEL AEIKYSTVQNWY GD +GKGGIYNFVTKRG C G RSKISWTQ+E
Sbjct: 61 NQLHAAVVELYCHGGAEIKYSTVQNWYAGDEEGKGGIYNFVTKRGLCAGPRSKISWTQVE 120
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
TGSAITWKYPS +L G++S GEFYS+A++N +QQ D+GTKM+H KNT SRI+SKGISAG
Sbjct: 121 TGSAITWKYPSVILEGDESVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISAG 180
Query: 375 FSNNTYRGKVSVHRGAAHS 393
S N YRG V V A ++
Sbjct: 181 HSRNCYRGLVQVLSNAQNA 199
>gi|282854699|ref|ZP_06264034.1| FeS assembly protein SufD [Propionibacterium acnes J139]
gi|282582281|gb|EFB87663.1| FeS assembly protein SufD [Propionibacterium acnes J139]
Length = 402
Score = 183 bits (465), Expect = 5e-44, Method: Composition-based stats.
Identities = 51/289 (17%), Positives = 95/289 (32%), Gaps = 16/289 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
IP + + ++ + V+ +
Sbjct: 119 IPAETSLKAPVEVTVAGHNDDIACHHNVVVEIGNHAEVTVIVRHRGVANLGENWT----- 173
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
D A+ VQ W G + G + + Q G
Sbjct: 174 FRIGDGAQATVLFVQEWDDAAIHGA--------QVSFEIGRDATVRTAQASFGGKAVRIC 225
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRG 382
+ G + Q I+ + H A +T S + +G G ++ + G
Sbjct: 226 QTASYNGPGGNLTQLGAYFAGAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIG 285
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFY 441
V + A + +L++ C A +P +E + + H A+T + E LFY
Sbjct: 286 DVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFY 345
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
RG+ E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 346 LQSRGVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLG 394
>gi|332992280|gb|AEF02335.1| Cysteine desulfurase activator SufB [Alteromonas sp. SN2]
Length = 418
Score = 183 bits (465), Expect = 5e-44, Method: Composition-based stats.
Identities = 63/376 (16%), Positives = 132/376 (35%), Gaps = 16/376 (4%)
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV-VTTFKEELK 153
+S + + + + + D V V + +
Sbjct: 36 KRRNESWINTPLTPVEKRNVAIATQADSVPVPNIDNLNALDIVFVDGVLVTQINTLDVPE 95
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
+ + + +A + + V + + +N A+ G F+ + G +
Sbjct: 96 GMAITSLNVDDAATQQAI---ASVFGQVKPTRHLFGRVNDALCQHGVFINVADGAKVTKP 152
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ K R L+ S +E + D + L A E D+A ++
Sbjct: 153 IRIVNLA-TKNVDAHTRVLVKLGNASSAVIIEQGSG---DTDSLTTAFAEYDIADDAHLE 208
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+ + Q G + RS ++ T + GS ++ GE +
Sbjct: 209 HYRFAMFTGSAKQLGGSHFMLH--------DRSTLNSTLVGYGSELSRLDVDMHHAGEFA 260
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ +I + + D + + H N T+ ++GI + + G++ +HR A +
Sbjct: 261 NAKMNAIYLLAEGELFDLHSTIEHAMPNGTTEENARGIVGDKARAVFNGRIHIHRDAQKT 320
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+LL+ +T P +E H AT ++I E L+Y L RG+P A+
Sbjct: 321 LAELNNRNLLLSRRGVINTKPELEIYADDVRCAHGATVAEIEGEALYYMLTRGVPRSKAL 380
Query: 454 ALIVNGFVREVLQKLP 469
++ GF++E++ +P
Sbjct: 381 VMLNFGFIQELINDMP 396
>gi|68536060|ref|YP_250765.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
gi|68263659|emb|CAI37147.1| ABC-type transport system involved in Fe-S cluster assembly
(permease component) [Corynebacterium jeikeium K411]
Length = 403
Score = 183 bits (464), Expect = 6e-44, Method: Composition-based stats.
Identities = 57/340 (16%), Positives = 109/340 (32%), Gaps = 27/340 (7%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV E + + L D A +V I K ++
Sbjct: 73 GVSDDDAPNVTVEQLEPGDERLGRAGAPVDRAAAQAWEN-TESADYVRISKDAALKAPVT 131
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + ++ + + + + H+ VE V A++
Sbjct: 132 ITVDGPGEDGISYGTLVVELEPHAEAVVFVR-----YEGSGAHSDNVEFVVGTGAKLTTV 186
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
++W G + + G + P
Sbjct: 187 VFEDWNDDAVHLSNS--------HIQVGRDATVRHYYAAFGGHVVRSVPHVRYTDTGGDA 238
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF---------SNNTYRGKVSV 386
E + ++ Q + + H +N S ++ KG G + + G V +
Sbjct: 239 ELLGLYFADAGQYFEQRLLVDHSIRNCRSNVLYKGALQGEPEKGKDAREARTAWIGDVLI 298
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQR 445
A + + + ++LL+ + A +P +E + H AT + DEH+FY R
Sbjct: 299 RPEATGTDTYEKNNNLLLTSGARADAVPNLEIQTGEIVGAGHAATVGRFDDEHMFYLQSR 358
Query: 446 GIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
GI A LIV GF +V++++P E E L++ +E
Sbjct: 359 GIDPANAKMLIVRGFFTDVIKRIPEESIRE---LLEDKVE 395
>gi|255327507|ref|ZP_05368574.1| FeS assembly protein SufD [Rothia mucilaginosa ATCC 25296]
gi|255295401|gb|EET74751.1| FeS assembly protein SufD [Rothia mucilaginosa ATCC 25296]
Length = 424
Score = 183 bits (464), Expect = 7e-44, Method: Composition-based stats.
Identities = 64/330 (19%), Positives = 115/330 (34%), Gaps = 18/330 (5%)
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+ E + + D A S+ IP +
Sbjct: 105 QISAPEQVQVETVSREDARIGSAGIPEDRVAANAWSSFTEATVVT-IPAEAELAEHVEID 163
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+ +I A S + T + A VE V D AE+ +V
Sbjct: 164 -ITGTGNEAAAQHIVIEAKPFSKAVVVLRHTGST-----VLAQNVEFVVNDEAELNVVSV 217
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
Q W G ++ + G + PS + E
Sbjct: 218 QQWADDAIHAS--------AHYAKLGRNARFKHVVVSLGGDLVRVTPSTKFTAPGAETEM 269
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNF 396
Y + + Q I+S + H N SR+ KG G ++ + G V + + A + +
Sbjct: 270 YGLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKGAHSVWVGDVLIGKDAEGTDTY 329
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+LL+ A ++P +E + H +TT ++ ++HL+Y RGIPE A L
Sbjct: 330 ELNRNLLLEVGPRADSVPNLEIETGLIEGAGHASTTGQLDEQHLWYLQARGIPEAEARRL 389
Query: 456 IVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
+V GF+ E++Q++ + E + + ++ L
Sbjct: 390 VVRGFLNEIIQQIRVPELEEQLTEALEAEL 419
>gi|183601554|ref|ZP_02962924.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683911|ref|YP_002470294.1| FeS assembly protein SufD [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190947|ref|YP_002968341.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196353|ref|YP_002969908.1| ABC-type transport system for Fe-S cluster assembly permease
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|183219160|gb|EDT89801.1| possible ABC transporter component [Bifidobacterium animalis subsp.
lactis HN019]
gi|219621561|gb|ACL29718.1| FeS assembly protein SufD [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249339|gb|ACS46279.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240250907|gb|ACS47846.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289178689|gb|ADC85935.1| SufD [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793936|gb|ADG33471.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium animalis subsp. lactis V9]
Length = 408
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 74/418 (17%), Positives = 138/418 (33%), Gaps = 28/418 (6%)
Query: 70 DPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQ 129
I P D +D YA P ++ R++E P+ ++
Sbjct: 1 MADPKEINIPVADPND--PYAIPAAMPSS------ADTAPRSFEVETFPVPTRKQEDWRF 52
Query: 130 TSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
T + FD + + + S+ ++ + TV D
Sbjct: 53 TPVDRLSEFFDVFEPSGRTQVSVTMIDGSAVDGSKVDVRTVNMGEDLSGTVSMPNDRVSC 112
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
++ +I AD + +
Sbjct: 113 VEWNSARESTIIELKQDL----EHPVLVKVFGTDDALDALHLVIAADARVHADVVVEHYG 168
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
R VE+V +++ I + +Q W G V G + +
Sbjct: 169 NARLAEG-----VEIVTGEDSHISTTFIQEWDRGSKH--------VGNHRIHVGKEASLR 215
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
+Q+ G + GE I + + I+ T ++H SR+V K
Sbjct: 216 HSQVTLGGDVVRIRMDQDFGGEHGELNMLGIYFVDPGEHIEHRTMVVHNEPECKSRVVYK 275
Query: 370 GISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEH 427
G +G ++T+ G + A + ++ +L++ A + P +E +N + H
Sbjct: 276 GALSGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAVADSEPNLEIENGNIVGAGH 335
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP-MEFAVEAQKLIDISL 484
++ + DE LFY RGIPE+ A L+V GF E+++++ E A + ID L
Sbjct: 336 ASSVGRFDDEELFYLESRGIPEKEARKLVVRGFFGELVEEIGIDEIATHLMQAIDRRL 393
>gi|332295147|ref|YP_004437070.1| SufBD protein [Thermodesulfobium narugense DSM 14796]
gi|332178250|gb|AEE13939.1| SufBD protein [Thermodesulfobium narugense DSM 14796]
Length = 416
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 77/393 (19%), Positives = 146/393 (37%), Gaps = 24/393 (6%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
P +D + + +SL + + + G+ I+E+ ++
Sbjct: 27 PDVDLERFKEFVK---RDKVESLTSLKAQTMEAAIMSGMDIKEE--------TRSGSFVQ 75
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
+ + + E+ K + M AI E D ++ Y VV + Y A + T
Sbjct: 76 LNHSVIYESLNEKY-KGQLQIMSTDNAI-EMFDWIEDYFWRVVKPDQDKYTAAVALNPTH 133
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G F+ + L ++E Q +II +EG+ ++ + GC+ + D +H
Sbjct: 134 GYFMRVFPNQHVEYPLQACLLVDENNISQNVHNIIIVEEGASLNVITGCSLSKNDAEGIH 193
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ E A + ++ + NW ++ L
Sbjct: 194 LGISEFYVKKGASLTFTMIHNWADNFDVRPRTGVYL-------EEDARYVNNYILLKPVK 246
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
P+ L G+ + +F ++ G ID G+KM A NT + +++ I+A S
Sbjct: 247 SIQSAPNVYLAGKNATAQFNNVIYGLGNSYIDLGSKMYLDAPNTRAESIARTIAADKSII 306
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL--EHEATTSKISD 436
RG + + R C ++ + IP + S HEA+ IS
Sbjct: 307 YSRGDM-IARTKDFCMAHLDCRGIVFSKEATMYAIPAL-VSEGSVKAHLSHEASIGPISQ 364
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
E + Y + RGI ++ A++LI GF+ + +P
Sbjct: 365 EQVEYLMSRGIEKDDAVSLITTGFLNLNIPYIP 397
>gi|283458124|ref|YP_003362740.1| Fe-S cluster assembly ABC transporter permease [Rothia mucilaginosa
DY-18]
gi|283134155|dbj|BAI64920.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Rothia mucilaginosa DY-18]
Length = 424
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 64/330 (19%), Positives = 115/330 (34%), Gaps = 18/330 (5%)
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
+ E + + D A S+ IP +
Sbjct: 105 KVTAPEQVQVETVSREDARIGSAGIPEDRVAANAWSSFTEATVVT-IPAEAELAEHVEID 163
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+ +I A S + T + A VE V D AE+ +V
Sbjct: 164 -ITGTGNEAAAQHIVIEAKPFSKAVVVLRHTGST-----VLAQNVEFVVNDEAELNVVSV 217
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
Q W G ++ + G + PS + E
Sbjct: 218 QQWADDAIHAS--------AHYAKLGRNARFKHVVVSLGGDLVRVTPSTKFTAPGAETEM 269
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNF 396
Y + + Q I+S + H N SR+ KG G ++ + G V + + A + +
Sbjct: 270 YGLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKGAHSVWVGDVLIGKDAEGTDTY 329
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+LL+ A ++P +E + H +TT ++ ++HL+Y RGIPE A L
Sbjct: 330 ELNRNLLLEVGPRADSVPNLEIETGLIEGAGHASTTGQLDEQHLWYLQARGIPEAEARRL 389
Query: 456 IVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
+V GF+ E++Q++ + E + + ++ L
Sbjct: 390 VVRGFLNEIIQQIRVPELEEQLTEALEAEL 419
>gi|311113562|ref|YP_003984784.1| FeS assembly protein SufD [Rothia dentocariosa ATCC 17931]
gi|310945056|gb|ADP41350.1| FeS assembly protein SufD [Rothia dentocariosa ATCC 17931]
Length = 424
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 77/389 (19%), Positives = 140/389 (35%), Gaps = 25/389 (6%)
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ LD E +Y + + E L G + + T + + +
Sbjct: 53 KVLDASRAERKTSYN-----VEDFEPLTGREEDWRFTPLKRLGGLHLDTLQAQAPAPKIQ 107
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
SE I E + + T D A + F + V IP +
Sbjct: 108 A--PSEVILEEVSREDERIGTAGVPEDRVAANAWT-HFKTATVVTIPAETELTEHIEIDI 164
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ + L+ A S + T + A +E + D+A++ T+Q
Sbjct: 165 DGQHRDAA-AQHILVEAKPFSKAVVVIRHTGSA-----VLAQNIEFLIQDSAQLSVITLQ 218
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
W + G ++ + G + PS + E Y
Sbjct: 219 QWNDDAIHAS--------AQYAKLGRDARFKHVCVSLGGDMVRVTPSTKFTEPGAETEMY 270
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFT 397
+ + Q I+S + H N SR+ KG G + ++ + G V + + A + +
Sbjct: 271 GLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKAAHSVWVGDVLIGKDAEGTDTYE 330
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+LL+ A ++P +E + H +TT ++ DEHL+Y RGIPE A L+
Sbjct: 331 LNRNLLLEIGPRADSVPNLEIETGRIEGAGHASTTGQLDDEHLWYLRARGIPEAEARRLV 390
Query: 457 VNGFVREVLQKLPM-EFAVEAQKLIDISL 484
V GF+ E++Q++ + E E ++ L
Sbjct: 391 VRGFLNEIIQQIRVPELETELTDALEAEL 419
>gi|326523615|dbj|BAJ92978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 120/311 (38%), Gaps = 19/311 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCP-MELSTYFRINEKG-----TGQFERTLIIAD 236
+ + N+ +D + V++P+G + + F + R L+IA+
Sbjct: 179 SHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAE 238
Query: 237 EGSYVSYLEGCTAPQRDE--NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ V+ +E ++ VV+++ + A + +S VQ + K
Sbjct: 239 KGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQ 298
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN-GFQQIDSGT 353
T SK + ++ TG+ + G ++ + + +++ Q D +
Sbjct: 299 NT--------SSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHS 350
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++ SR + K I+ G N + G + V+R A + Q LL+ +
Sbjct: 351 RLILDHPRGFSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVK 410
Query: 414 PYIESKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P ++ H A ++ LFY RG+ A ++ F +V+ ++P
Sbjct: 411 PNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPF-K 469
Query: 473 AVEAQKLIDIS 483
A+E + L +
Sbjct: 470 AIEKKALAQLK 480
>gi|326509811|dbj|BAJ87121.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 120/311 (38%), Gaps = 19/311 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCP-MELSTYFRINEKG-----TGQFERTLIIAD 236
+ + N+ +D + V++P+G + + F + R L+IA+
Sbjct: 202 SHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAE 261
Query: 237 EGSYVSYLEGCTAPQRDE--NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ V+ +E ++ VV+++ + A + +S VQ + K
Sbjct: 262 KGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQ 321
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN-GFQQIDSGT 353
T SK + ++ TG+ + G ++ + + +++ Q D +
Sbjct: 322 NT--------SSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHS 373
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++ SR + K I+ G N + G + V+R A + Q LL+ +
Sbjct: 374 RLILDHPRGFSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVK 433
Query: 414 PYIESKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P ++ H A ++ LFY RG+ A ++ F +V+ ++P
Sbjct: 434 PNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPF-K 492
Query: 473 AVEAQKLIDIS 483
A+E + L +
Sbjct: 493 AIEKKALAQLK 503
>gi|326496228|dbj|BAJ94576.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528307|dbj|BAJ93335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 120/311 (38%), Gaps = 19/311 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCP-MELSTYFRINEKG-----TGQFERTLIIAD 236
+ + N+ +D + V++P+G + + F + R L+IA+
Sbjct: 175 SHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAE 234
Query: 237 EGSYVSYLEGCTAPQRDE--NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ V+ +E ++ VV+++ + A + +S VQ + K
Sbjct: 235 KGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQ 294
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN-GFQQIDSGT 353
T SK + ++ TG+ + G ++ + + +++ Q D +
Sbjct: 295 NT--------SSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHS 346
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++ SR + K I+ G N + G + V+R A + Q LL+ +
Sbjct: 347 RLILDHPRGFSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVK 406
Query: 414 PYIESKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P ++ H A ++ LFY RG+ A ++ F +V+ ++P
Sbjct: 407 PNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPF-K 465
Query: 473 AVEAQKLIDIS 483
A+E + L +
Sbjct: 466 AIEKKALAQLK 476
>gi|326488209|dbj|BAJ89943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 508
Score = 182 bits (463), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 120/311 (38%), Gaps = 19/311 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCP-MELSTYFRINEKG-----TGQFERTLIIAD 236
+ + N+ +D + V++P+G + + F + R L+IA+
Sbjct: 197 SHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAE 256
Query: 237 EGSYVSYLEGCTAPQRDE--NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ V+ +E ++ VV+++ + A + +S VQ + K
Sbjct: 257 KGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQ 316
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN-GFQQIDSGT 353
T SK + ++ TG+ + G ++ + + +++ Q D +
Sbjct: 317 NT--------SSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHS 368
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++ SR + K I+ G N + G + V+R A + Q LL+ +
Sbjct: 369 RLILDHPRGFSRQLHKLIACGTGNGIFDGNIQVNRYAQQTDAGQQTKCLLLSPKAVVNVK 428
Query: 414 PYIESKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P ++ H A ++ LFY RG+ A ++ F +V+ ++P
Sbjct: 429 PNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPF-K 487
Query: 473 AVEAQKLIDIS 483
A+E + L +
Sbjct: 488 AIEKKALAQLK 498
>gi|313836750|gb|EFS74464.1| FeS assembly protein SufD [Propionibacterium acnes HL037PA2]
gi|314929843|gb|EFS93674.1| FeS assembly protein SufD [Propionibacterium acnes HL044PA1]
gi|314972271|gb|EFT16368.1| FeS assembly protein SufD [Propionibacterium acnes HL037PA3]
Length = 366
Score = 182 bits (463), Expect = 9e-44, Method: Composition-based stats.
Identities = 51/289 (17%), Positives = 98/289 (33%), Gaps = 16/289 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+P + + ++ + + + +
Sbjct: 83 VPAEASLKTPVEVTITGHNDEVSCHHNVVVEIGNHAEATVIVRHRGIAHLGENWTFRIS- 141
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
D A++ VQ W G G + G + + Q G
Sbjct: 142 ----DGAQVMVLFVQEWDDGAVHGA--------QVSFEIGRDATVRTAQASFGGKAVRIS 189
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRG 382
+ G ++ Q I+ + H A +T S + +G G ++ + G
Sbjct: 190 QTASYTGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIG 249
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFY 441
V + A + +L++ C A +P +E + + H A+T + E LFY
Sbjct: 250 DVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFY 309
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
RGI E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 310 LQSRGIEEVEARRLVVHGFFTDIVRKIGVPEMSEELVARIEAELVASLG 358
>gi|152966860|ref|YP_001362644.1| FeS assembly protein SufD [Kineococcus radiotolerans SRS30216]
gi|151361377|gb|ABS04380.1| FeS assembly protein SufD [Kineococcus radiotolerans SRS30216]
Length = 410
Score = 182 bits (463), Expect = 9e-44, Method: Composition-based stats.
Identities = 57/331 (17%), Positives = 106/331 (32%), Gaps = 18/331 (5%)
Query: 157 VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST 216
V L + T GD AA S+ V +P +
Sbjct: 86 VEVSGPDVVEHRTGTLAEVGAGTAFVPGDRVAAAGWSS-TGVAHLVRVPAEAELEAPVLV 144
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
R T ++ + + H VE+ A D +++ T
Sbjct: 145 TVRGEAGRTTS-GHLVVETGHHAKALVVLSHVGGG-----AHRGNVEVRAGDGSDLTVVT 198
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+Q W V + G +++ + G +
Sbjct: 199 LQEWDADAVH--------VGQHDVRVGRDAQVRHIGVTLGGKAVRVSVNIGYAAPGGSAT 250
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRN 395
+ + Q + + H A + S + KG G ++ + G V + A +
Sbjct: 251 ALGVYFAGAGQHSEHRQFVDHEAVSCKSYVEYKGALQGEGAHAVWIGDVLIRATAEGTET 310
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ +L++ + A ++P +E + H + T + DE LFY RGI E+ A
Sbjct: 311 YELNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLQSRGITEDEARR 370
Query: 455 LIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF ++ K+ + E + I+ L
Sbjct: 371 LVVRGFFASIVDKIGIPEISQRLMTTIETQL 401
>gi|326520878|dbj|BAJ92802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 120/311 (38%), Gaps = 19/311 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCP-MELSTYFRINEKG-----TGQFERTLIIAD 236
+ + N+ +D + V++P+G + + F + R L+IA+
Sbjct: 175 SHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMFAYSGSDGASSLMMSNPRVLVIAE 234
Query: 237 EGSYVSYLEGCTAPQRDE--NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+G+ V+ +E ++ VV+++ + A + +S VQ + K
Sbjct: 235 KGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTTVQQ 294
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN-GFQQIDSGT 353
T SK + ++ TG+ + G ++ + + +++ Q D +
Sbjct: 295 NT--------SSKYEFVEVSTGARLNRHNLHIQQLGPETETDLSTFHLTSQNKQIHDLHS 346
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+++ SR + K I+ G N + G + V+R A + Q LL+ +
Sbjct: 347 RLILDHPRGFSRQLHKLIACGTGNGIFDGNIQVNRYARQTDAGQQTKCLLLSPKAVVNVK 406
Query: 414 PYIESKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
P ++ H A ++ LFY RG+ A ++ F +V+ ++P
Sbjct: 407 PNLQIIADDVKCTHGAAISGELDPNELFYFQARGVDANTATDALLFSFGAQVINRIPF-K 465
Query: 473 AVEAQKLIDIS 483
A+E + L +
Sbjct: 466 AIEKKALAQLK 476
>gi|317124833|ref|YP_004098945.1| Iron-regulated ABC transporter permease SufD [Intrasporangium
calvum DSM 43043]
gi|315588921|gb|ADU48218.1| Iron-regulated ABC transporter permease protein SufD
[Intrasporangium calvum DSM 43043]
Length = 432
Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 103/303 (33%), Gaps = 17/303 (5%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTLIIADEGSYV 241
+ AA+ +A + V I + G +I A S
Sbjct: 106 PPQDRAAAVAAAGAQEVLLVDIAPEAELTQPVRLLLDGTGTDGAVAHAHLVIRAGHHSRA 165
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
+ + + +V ++ D +++ Q W + +
Sbjct: 166 TVVIDHQGRGQLTE-----LVSVLTEDASDLTVVAGQRWADDAIH--------LAQHDAL 212
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G S+ + G + + G + ++ Q ++ + + H +
Sbjct: 213 VGRDSRYRHISVTLGGEVVRLNANVRYAGPGGDATLLGVYFADSGQHLEHRSFVDHNTAH 272
Query: 362 TTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
S + KG G + + G + A + + +L++ A ++P +E +
Sbjct: 273 CKSLVTYKGALQGGTARTVWVGDALIRAAAEGTDTYELNRNLILTEGARADSVPNLEIET 332
Query: 421 SSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQK 478
H + T + D LFY RGIPEE A L+V GF +V++++P+ + E
Sbjct: 333 GEIKGAGHASATGRFDDLQLFYLQARGIPEEEAKRLVVRGFFADVVREIPLPDLRDEVSA 392
Query: 479 LID 481
I+
Sbjct: 393 AIE 395
>gi|255588981|ref|XP_002534787.1| Protein sufD, putative [Ricinus communis]
gi|223524572|gb|EEF27596.1| Protein sufD, putative [Ricinus communis]
Length = 484
Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/435 (18%), Positives = 143/435 (32%), Gaps = 49/435 (11%)
Query: 54 MLEWRLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
+ + R L+ PS + I ++ + P I ++
Sbjct: 66 LQKLRDSCSESLLSTPWPSRRDEPFRFTDTSLIKQSQIHPISKPPPIDHLT-------DI 118
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
+ + I I + IL + S D VF + + K F +
Sbjct: 119 SKDAQLPNIVIVDGFILNSMSNSLNFPDGVFVGSMLNDPEDKIAKLVSKYFDDF-----Q 173
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--- 225
DL P D + +Y+P GVR + + E G
Sbjct: 174 WGDLFWSINGLGAP---------------DVAVIYVPAGVRVENPIHLRYVSVEGGEEGS 218
Query: 226 ----GQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEIKYSTVQNW 280
R L++ +EG V +E + D+ +V+E++ + A++K+S +Q+
Sbjct: 219 NKLPVSNPRVLVVVEEGGEVGIIEEFVSIGSGDKCYWANSVLEVMIEEGAKVKHSYIQSQ 278
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ K + S ++ TG ++ G + E +
Sbjct: 279 SLNSAHIKWTA--------VQQKSSSTYELVEVSTGGKLSRHNLHVQQLGPDTSTELSTF 330
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-SNNTYRGKVSVHRGAAHSRNFTQC 399
+ Q D ++++ SR + K I A + G V V+R A +
Sbjct: 331 HLCVSSQTQDLHSRLVLDHPRAYSRQLHKCIVAHSLGQAVFDGNVKVNRYAQQTDAGQLT 390
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
SLL+ + P ++ H A S + + LFY RGI E A +V
Sbjct: 391 RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFS 450
Query: 460 FVREVLQKLPMEFAV 474
F EV+ + P F
Sbjct: 451 FGAEVIDRCPFSFIR 465
>gi|166711246|ref|ZP_02242453.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 420
Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats.
Identities = 76/435 (17%), Positives = 149/435 (34%), Gaps = 38/435 (8%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
+ R L P A + L P + P L+
Sbjct: 16 DTRRAELDAALQTGLPGPRA---EAWKYTSLRQLERRSFQPAP-----LVPTLVDAAALE 67
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
IP + G + ++ + + T L +A ++
Sbjct: 68 DIPSPRLVFVNGRPSEALSDLSTLPDGVQLDTLSASLA-------ASDDA--------QQ 112
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT--GQFERTLI 233
L D +A LN+A+ +G V + G + + L F R LI
Sbjct: 113 LLGRRFDGSDEVFARLNAALADEGMLVRVRDGAQIELPLHLVFVSMAGEHDLSWHHRHLI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
G+ + +E D L +V+ + +A + ++ +Q +
Sbjct: 173 QLRAGAALQLVEHHL-HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHATS------- 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + ++ LE G+ ++ + L G + + + NG + +D+
Sbjct: 225 -LLRTDAVLARNARYQRVDLELGAGLSRHELNVRLEGSNAQLTANGVLLGNGRRHVDTRL 283
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H+A++T +V +G+ A S + G + + GA + +LL+ +N
Sbjct: 284 GIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGADGTDARLSSKNLLLSSNAEIDAQ 343
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + H AT ++ D LFY RG+P+E A L+ F E L+ LP
Sbjct: 344 PVLVIDADEVQAAHGATVGQLDDNALFYLRARGLPQEQAQRLLSAAFCHEPLRVLP---- 399
Query: 474 VEAQKLIDISLEGSV 488
++ + L+ ++
Sbjct: 400 AALSAVLALQLDRAL 414
>gi|15896535|ref|NP_349884.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|15026368|gb|AAK81224.1|AE007825_8 Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum ATCC 824]
gi|325510693|gb|ADZ22329.1| Iron-regulated ABC-type transporter membrane component (SufB)
[Clostridium acetobutylicum EA 2018]
Length = 366
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 117/293 (39%), Gaps = 12/293 (4%)
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
+ G +V+ K +C + + +NE + LIIA+EGS ++ + +
Sbjct: 83 YNTGVYVHSSKYSKCSEPIVINYYMNEANNTVVDNNLIIAEEGSEITVVVNY-DSDENTT 141
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
H + ++ A N+ + +Q + +++T ++
Sbjct: 142 SFHNGLTQIYAKANSVVNLVKIQTLSGSSLHLDAHT--------VKTEENAVVNYTAVDL 193
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
GS + L G +S SI + + + ID + H K+ S I ++G
Sbjct: 194 GSKYAVTNYTDDLSGFRSSANVKSIYLGDKDRVIDINYLINHYGKDARSNIETRGALMDR 253
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
S T+RG + +G S+ + ++L+ + ++P + + +H A+ +I
Sbjct: 254 SKKTFRGTLDFKKGCKKSKGEEEEYTVLLSPHVINKSVPILLCTEEDVDGQHAASAGRID 313
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ LFY + RG E A L++ ++ ++P E E + I S+ +
Sbjct: 314 ENKLFYIMSRGFSETEAKKLVIEAAFNPIINQIPSE---EIKNKISTSIRRRL 363
>gi|328907700|gb|EGG27464.1| FeS assembly protein SufD [Propionibacterium sp. P08]
Length = 402
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 51/289 (17%), Positives = 98/289 (33%), Gaps = 16/289 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+P + + ++ + + + +
Sbjct: 119 VPAEASLKTPVEVTITGHNDEVSCHHNVVVEIGNHAEATVIVRHRGIAHLGENWTFRIS- 177
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
D A++ VQ W G G + G + + Q G
Sbjct: 178 ----DGAQVMVLFVQEWDDGAVHGA--------QVSFEIGRDATVRTAQASFGGKAVRIS 225
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRG 382
+ G ++ Q I+ + H A +T S + +G G ++ + G
Sbjct: 226 QTASYTGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIG 285
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFY 441
V + A + +L++ C A +P +E + + H A+T + E LFY
Sbjct: 286 DVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFY 345
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISLEGSVG 489
RGI E A L+V+GF ++++K+ + E + E I+ L S+G
Sbjct: 346 LQSRGIEEVEARRLVVHGFFTDIVRKIGVPEMSEELVARIEAELVASLG 394
>gi|315226495|ref|ZP_07868283.1| FeS assembly protein SufD [Parascardovia denticolens DSM 10105]
gi|315120627|gb|EFT83759.1| FeS assembly protein SufD [Parascardovia denticolens DSM 10105]
Length = 413
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 70/406 (17%), Positives = 133/406 (32%), Gaps = 29/406 (7%)
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
YA P ++ + R++ P+ ++ T + F +
Sbjct: 20 PYAFPATMPSSADRE------PRSFNPDDFPLPTRKQEDWRYTPLERMGEFFQVFQPSGS 73
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
L +P A V D + ++ V +
Sbjct: 74 THVSLTTVDGSPLPAGVASIRETTTADPEAGIVSQPNDRVSSVEWASSANRVFVVDLQGQ 133
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
P+ +I A + + + T R VE+V
Sbjct: 134 WSTPI---LVKVEGTSLDLDALHLIIKAADKAAGDIIISHTGDARLAEG-----VEIVTG 185
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
++ +++Q W PG + G + + + G +
Sbjct: 186 ADSHTCLASIQEWNPGSKHVGNHRIHL--------GAHATLRHCMVTLGGDLVRIRMDQD 237
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSV 386
GE+ I Q I+ T ++H SR++ KG G +++T+ G +
Sbjct: 238 FAGEEGDLNMLGIYFVEPGQHIEHRTMVVHNQPRCKSRVIYKGALEGNKAHSTWVGNALI 297
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQR 445
A + ++ +L++ A + P +E +N H ++ + DE LFY R
Sbjct: 298 QPQAPGTDSYELNRNLVLIPGAIADSEPNLEIENGDIVGAGHASSVGRFDDEELFYLQSR 357
Query: 446 GIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID---ISLEGSV 488
GI E A L+V+GF ++++++ + Q LID LE SV
Sbjct: 358 GISEAQARKLVVSGFFVDLIEEIGIPSIS--QHLIDAVNRRLEKSV 401
>gi|294786859|ref|ZP_06752113.1| FeS assembly protein SufD [Parascardovia denticolens F0305]
gi|294485692|gb|EFG33326.1| FeS assembly protein SufD [Parascardovia denticolens F0305]
Length = 410
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 70/406 (17%), Positives = 133/406 (32%), Gaps = 29/406 (7%)
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
YA P ++ + R++ P+ ++ T + F +
Sbjct: 17 PYAFPATMPSSADRE------PRSFNPDDFPLPTRKQEDWRYTPLERMGEFFQVFQPSGS 70
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
L +P A V D + ++ V +
Sbjct: 71 THVSLTTVDGSPLPAGVASIRETTTADPEAGIVSQPNDRVSSVEWASSANRVFVVDLQGQ 130
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
P+ +I A + + + T R VE+V
Sbjct: 131 WSTPI---LVKVEGTSLDLDALHLIIKAADKAAGDIIISHTGDARLAEG-----VEIVTG 182
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
++ +++Q W PG + G + + + G +
Sbjct: 183 ADSHTCLASIQEWNPGSKHVGNHRIHL--------GAHATLRHCMVTLGGDLVRIRMDQD 234
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSV 386
GE+ I Q I+ T ++H SR++ KG G +++T+ G +
Sbjct: 235 FAGEEGDLNMLGIYFVEPGQHIEHRTMVVHNQPRCKSRVIYKGALEGNKAHSTWVGNALI 294
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQR 445
A + ++ +L++ A + P +E +N H ++ + DE LFY R
Sbjct: 295 QPQAPGTDSYELNRNLVLIPGAIADSEPNLEIENGDIVGAGHASSVGRFDDEELFYLQSR 354
Query: 446 GIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID---ISLEGSV 488
GI E A L+V+GF ++++++ + Q LID LE SV
Sbjct: 355 GISEAQARKLVVSGFFVDLIEEIGIPSIS--QHLIDAVNRRLEKSV 398
>gi|269986285|gb|EEZ92593.1| SufBD protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 150
Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 63/150 (42%), Positives = 86/150 (57%)
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
+ G K +HLA NT+S I SK I TYRG V V +GA R+ T+C
Sbjct: 1 MHWQIKGNIRTQGQKQVHLAPNTSSVIQSKSICLNGGRTTYRGLVKVKKGATDVRSSTRC 60
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
D+L+ + T PY+E + HEA+ KI DE LFY RG+ E AI +IV G
Sbjct: 61 DALIFDDFSRTDTYPYMEIDEEESTISHEASVGKIGDEQLFYLESRGLSELEAINMIVLG 120
Query: 460 FVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
F+ E +++LP+EFAVE +LI I++EG+VG
Sbjct: 121 FIAEFVEELPIEFAVEFNRLIKINMEGAVG 150
>gi|300741471|ref|ZP_07071492.1| FeS assembly protein SufD [Rothia dentocariosa M567]
gi|300380656|gb|EFJ77218.1| FeS assembly protein SufD [Rothia dentocariosa M567]
Length = 424
Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/389 (19%), Positives = 139/389 (35%), Gaps = 25/389 (6%)
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ LD E +Y + + E L G + + + + +
Sbjct: 53 KVLDASRAERKTSYN-----VEDFEPLTGREEDWRFTPLKRLGGLHLDILQAQAPAPKIQ 107
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
SE I E + + T D A + F + V IP +
Sbjct: 108 A--PSEVILEEVSREDERIGTAGVPEDRVAANAWT-HFKTATVVTIPAETELAEHIEIDI 164
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ + LI A S + T + A +E + D+A++ T+Q
Sbjct: 165 DGQHRDAA-AQHILIEAKPFSKAVVVIRHTGSA-----VLAQNIEFLVQDSAQLSVITLQ 218
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
W + G ++ + G + PS + E Y
Sbjct: 219 QWNDDAIHAS--------AQYAKLGRDARFKHVCVSLGGDMVRVTPSTKFTKPGAETEMY 270
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFT 397
+ + Q I+S + H N SR+ KG G + ++ + G V + + A + +
Sbjct: 271 GLYFVDAGQHIESRLFVDHSVPNCKSRVTYKGALQGKAAHSVWVGDVLIGKEAEGTDTYE 330
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+LL+ A ++P +E + H +TT ++ DEHL+Y RGIPE A L+
Sbjct: 331 LNRNLLLEIGPRADSVPNLEIETGRIEGAGHASTTGQLDDEHLWYLRARGIPEAEARRLV 390
Query: 457 VNGFVREVLQKLPM-EFAVEAQKLIDISL 484
V GF+ E++Q++ + E E ++ L
Sbjct: 391 VRGFLNEIIQQIRVPELETELTDALEAEL 419
>gi|298253481|ref|ZP_06977273.1| cysteine desulfurase activator SufD [Gardnerella vaginalis 5-1]
gi|297532876|gb|EFH71762.1| cysteine desulfurase activator SufD [Gardnerella vaginalis 5-1]
Length = 415
Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 66/392 (16%), Positives = 139/392 (35%), Gaps = 18/392 (4%)
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P ++ + +R++ I ++ T + F+ + + L+ G
Sbjct: 32 PAAMPSSADKSVRSFNVEDFAIPTRKQEDWRYTPVERISEFFERFEPSNSIQVTLEGVGG 91
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY--IPKGVRCPMELS 215
+ S + ++ P D + +AV + + + +
Sbjct: 92 AALDDSYVGSDGSVSLQVKPKNEAPHTDMKPSDRVAAVAWNTAKSAYVLHVSGEIKKPIV 151
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + T +I AD S + T + VE++ +A + +
Sbjct: 152 LKIQGDNVNTLDALHLVIEADSRSNADIIIEHTGCAKLAEG-----VEIILGKHAHVSTT 206
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+Q W G V + G + + T + G + GEQ
Sbjct: 207 FIQEWDSGSKH--------VGNQRIHVGEGASLRHTMVTLGGDVVRIRMDQDFGGEQGDL 258
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSR 394
+ + + ++ T ++H SR+V KG G ++T+ G + A +
Sbjct: 259 NMLGMYFVDPGEHVEHRTMVVHNYPECKSRVVYKGALEGKGAHSTWVGNALIKPEAPGTD 318
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAI 453
++ +L++ A + P +E +N + H ++ + DE LFY RG+ E A
Sbjct: 319 SYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGVSEVEAR 378
Query: 454 ALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF E+++++ + E K I+ L
Sbjct: 379 KLVVRGFFNELIEEIGVPEIVDHLMKAIERRL 410
>gi|296170678|ref|ZP_06852253.1| FeS assembly protein SufD [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894667|gb|EFG74401.1| FeS assembly protein SufD [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 395
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 55/309 (17%), Positives = 106/309 (34%), Gaps = 22/309 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + V + + + ++ G + I E +
Sbjct: 92 DRVAAQAFSSFNSATLVSVGRDTQVAEPVNITVTGPGAGAVAYGHLQISVAELGEAVVVI 151
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+ VEL+ D A + + +W + G
Sbjct: 152 DHRGSGTYADN-----VELIVDDAARLTVVWIADWADDMVHLS--------AQHARLGKD 198
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + G + + E + ++ Q ++S + H N S
Sbjct: 199 AVLRHVAVTLGGEVVRMSANVRYAAPGGDAELLGLYFADDGQHLESRLLVDHAQPNCKSN 258
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
++ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 259 VLYKGALQGDPASQRPDAHTVWVGDVLIRAEATDTETFEVNRNLVLTDGARADSVPNLEI 318
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEA 476
+ H + T + DE LFY RGIPE+ A L+V GF E++ K+ + E
Sbjct: 319 ETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFGEIIAKIAVPEIRERL 378
Query: 477 QKLIDISLE 485
I+ LE
Sbjct: 379 TAAIEHELE 387
>gi|327334193|gb|EGE75907.1| FeS assembly protein SufD [Propionibacterium acnes HL097PA1]
Length = 366
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 58/324 (17%), Positives = 106/324 (32%), Gaps = 17/324 (5%)
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDG-SFVYIPKGVRCPMELSTYFRINEKGTGQF 228
DL L + + +AL +A V IP + +
Sbjct: 48 TDLATSELKKLAETPQDRLSALAAADPHAVNRRVVIPAETSLKAAVEVTVAGHNDEIACH 107
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
++ + V+ + D A+ VQ W G
Sbjct: 108 HNVVVEIGNHAEVTVIVRHRGVAHLGENWT-----FRIGDGAQATVLFVQEWDDAAIHGA 162
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+ G + + Q G + G ++ Q
Sbjct: 163 --------QVSFEIGRDATVRTAQASFGGKAVRICQTASYNGPGGNLTQLGAYFADAGQH 214
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
I+ + H A +T S + +G G ++ + G V + A + +L++
Sbjct: 215 IEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEG 274
Query: 408 CGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
C A +P +E + + H A+T + E LFY RG+ E A L+V+GF ++++
Sbjct: 275 CRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVR 334
Query: 467 KLPM-EFAVEAQKLIDISLEGSVG 489
K+ + E E I+ L S+G
Sbjct: 335 KIGVPEICEELVARIEAELVESLG 358
>gi|242056569|ref|XP_002457430.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
gi|241929405|gb|EES02550.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
Length = 479
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 55/300 (18%), Positives = 117/300 (39%), Gaps = 16/300 (5%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRC-PMELSTYFRINEKGTGQF----ERTLIIADEG 238
+ + N+ D V++P+GV+ + F G G R L++A++
Sbjct: 166 HKDLFYDFNAVGARDVVVVHVPEGVKMADDPIHILFAYTNSGAGSMLMSNPRVLVVAEKA 225
Query: 239 SYVSYLEGCTAPQRDE-NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ V+ +E + V E++ + A + +S VQ + K +
Sbjct: 226 AEVAIVEEHFGAGEEGGCYWANPVAEIIIDEGARVVHSYVQQQSFAAAHTKWTV------ 279
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN-GFQQIDSGTKML 356
+ SK + ++ TG+ + G ++ E ++ +++ Q D ++++
Sbjct: 280 --VKQDTTSKYEFVEVSTGAKLNRHNLHIEQLGPETETELSTLHLTSQNKQIHDLHSRLI 337
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
SR + K I+ G N+ + G + V+R A + + L++ + P +
Sbjct: 338 LDHPRGFSRQLHKCIACGTGNSIFDGNIKVNRYAQQTDAGQETKCLILSPKALVNVKPNL 397
Query: 417 ESKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ H A ++ LFY RGI E A ++ F V++++P + E
Sbjct: 398 QIIADDVKCTHGAAISGELDPNELFYFQARGINTETATDALLYFFGAHVIKRIPFKPVSE 457
>gi|260892449|ref|YP_003238546.1| SufBD protein [Ammonifex degensii KC4]
gi|260864590|gb|ACX51696.1| SufBD protein [Ammonifex degensii KC4]
Length = 368
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/392 (20%), Positives = 156/392 (39%), Gaps = 29/392 (7%)
Query: 92 PKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEE 151
K + L + PE ++GI + + FD + +
Sbjct: 2 SKELTSSLDLSSLPPEEKECLLRVGIELS--------GEGRGGTYLQFDQEV----LQYQ 49
Query: 152 LKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCP 211
++ G+ + + +A V++YL ++P G FV + GV
Sbjct: 50 SRQEGLEVLSLQQA-RRLYPWVEEYLGRLLPEARPEDPE------ARGYFVRVLPGVEVR 102
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ + I +GT Q L+I +EG+ +S + GC + + H + E +
Sbjct: 103 YPVQSSLFIAREGTRQEVHNLVIVEEGASLSLIAGCASGACVRHGQHIGITETFIKRGGK 162
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ ++ + W G + I +G+ PS L G
Sbjct: 163 LTFTMIHRWGEEVESTPQGAV-------WVEEGGTYIYNYICLSGAKKLVTNPSTYLAGA 215
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ SI ++ +D G+++ A +T + ++S+ I+ G + RG + V A
Sbjct: 216 GAVVRSQSILLAPPGTSMDVGSRVYLQAPDTKAELISRAITTGGEIIS-RGLL-VGEVA- 272
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
R +C L++ +P +E++ ++ L HEA K+++E + Y + RG+ EE
Sbjct: 273 GVRGHLECHGLMLTPQGRILAVPELEARTANVELSHEAAVGKVAEEAVEYLMARGLDEEE 332
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
A+A+IV GF+ ++ LP E ++I +S
Sbjct: 333 ALAVIVRGFLNVRIEGLPPALQEEIDRIIKVS 364
>gi|90019231|gb|ABD84267.1| ABC-type transport system-like [Yersinia sp. MH-1]
Length = 180
Score = 181 bits (459), Expect = 3e-43, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 1/179 (0%)
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
G+ +T S L GE + S+ + G + D+ T + H SR +
Sbjct: 1 RSYSFLLGAGLTRHNTSAQLNGEGASLSMNSLLLPIGREVCDTRTYLEHNKGYCESRQLH 60
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K + + G + V + A + ++LL+ T P +E H
Sbjct: 61 KTVVRERGKAVFNGMIKVAQHALKTDGQMTNNNLLLSKLAEVDTKPQLEIYADDVKCSHG 120
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA-QKLIDISLEG 486
AT +I E LFY RGI + A +I+ F E+ + + E + + I L G
Sbjct: 121 ATVGRIDAEQLFYLQSRGISQADAQQMIIFAFAAELTEAMSNETIRKLVMERIAERLAG 179
>gi|283782880|ref|YP_003373634.1| FeS assembly protein SufD [Gardnerella vaginalis 409-05]
gi|283441359|gb|ADB13825.1| FeS assembly protein SufD [Gardnerella vaginalis 409-05]
Length = 415
Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats.
Identities = 66/392 (16%), Positives = 139/392 (35%), Gaps = 18/392 (4%)
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P ++ + +R++ I ++ T + F+ + + L+ G
Sbjct: 32 PAAMPSSADKSVRSFNVEDFAIPTRKQEDWRYTPVERISEFFERFEPSNSIQVTLEGVGG 91
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVY--IPKGVRCPMELS 215
+ S + ++ P D + +AV + + + +
Sbjct: 92 AALDDSYVGSDGSVSLQVKPKNEAPHTDMKPSDRVAAVAWNTAKSAYVLHVSGEIKKPIV 151
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + T +I AD S + T + VE++ +A + +
Sbjct: 152 LKIQGDNVNTLDALHLVIEADSRSNADIIIEHTGCAKLAEG-----VEIILGKHAHVSTT 206
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+Q W G V + G + + T + G + GEQ
Sbjct: 207 FIQEWDSGSKH--------VGNQRIHVGEGASLRHTMVTLGGNVVRIRMDQDFGGEQGDL 258
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSR 394
+ + + ++ T ++H SR+V KG G ++T+ G + A +
Sbjct: 259 NMLGMYFVDPGEHVEHRTMVVHNYPECKSRVVYKGALEGKGAHSTWVGNALIKPEAPGTD 318
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAI 453
++ +L++ A + P +E +N + H ++ + DE LFY RG+ E A
Sbjct: 319 SYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGVSEVEAR 378
Query: 454 ALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
L+V GF E+++++ + E K I+ L
Sbjct: 379 KLVVRGFFNELIEEIGVPEIVDHLMKAIERRL 410
>gi|218780912|ref|YP_002432230.1| SufBD protein [Desulfatibacillum alkenivorans AK-01]
gi|218762296|gb|ACL04762.1| SufBD protein [Desulfatibacillum alkenivorans AK-01]
Length = 390
Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats.
Identities = 80/375 (21%), Positives = 147/375 (39%), Gaps = 14/375 (3%)
Query: 107 ELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI 166
E L + + ++ + GV S+ F V + + K+ GV M I++A
Sbjct: 23 EYLADLKAINPADADKFLSVGVDASEDFRAGTFI-VKDQSVLHSKTKQKGVDIMSITQAK 81
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+ + YL V G + Y + +G F+ G + + I ++
Sbjct: 82 DKFD--LSPYLWKGVDPGKDEYTSWAHEQPAEGYFIRSQPGQIIQAPVQSCLYIEKEQFA 139
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
Q L+IA+EGS++S + GC + LH + E A + ++ + +W +
Sbjct: 140 QNVHNLVIAEEGSHLSIINGCATSPHLISGLHVGITEFYVKKGAVLSFTMIHDWGKEVNV 199
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+ G IS P+ LRG + F SI +++
Sbjct: 200 RPRTV-------GYVEEGGVLISNYISLRPVGSLQMSPTTHLRGRGAIARFNSILVADKG 252
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+D G+ ++ A T + I+S+ I+ G K + + +C L++
Sbjct: 253 STLDVGSNVILEAPETKAEIISRAITFGGDIL---AKGKLVGLVPEVKAHLECKGLIL-K 308
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ IP +E+ + HEA KI + + Y + RG+ EE A++ IV GF+ ++
Sbjct: 309 DGLMLAIPELEAHVPGVEMSHEAAVGKIDNREIEYLMARGLTEEEAVSTIVRGFLNVDIE 368
Query: 467 KLPMEFAVEAQKLID 481
LP K+I
Sbjct: 369 GLPSGLKQRLDKVIS 383
>gi|116071398|ref|ZP_01468667.1| ABC transporter, membrane component [Synechococcus sp. BL107]
gi|116066803|gb|EAU72560.1| ABC transporter, membrane component [Synechococcus sp. BL107]
Length = 396
Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats.
Identities = 61/305 (20%), Positives = 122/305 (40%), Gaps = 20/305 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE-RTLIIADEGSYV 241
D++ N A + + V +G R L++ +E + +
Sbjct: 108 WSDDWLIEFNHASAQQLLALRVRGMVPP------VEITMAAASGLIPTRVLLVVEEKAQL 161
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
L+ +A H+ ++E+ A++ + + G+ + +
Sbjct: 162 ELLQVFSARGEAA---HSHLLEVHLGQEAQLNHGVL--------ACADGVASLFAQLAVE 210
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ RS S+T + G ++ P + Q+ +A+++ QQ+ T + +
Sbjct: 211 QEPRSAYSFTSVVQGWSLGRIEPRVVQVDGQASTTLKGLAVADAEQQLAVHTSVCFEGPD 270
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
+ K ++AG S+ + G ++V R A + +LL+ + T P +E
Sbjct: 271 GELEQLQKCLAAGRSHTIFNGAINVPRKAQRTNAAQLSRNLLLSDRARVDTKPELEIVAD 330
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
H AT S++ ++ LFY RGI A AL++ G +EV++KLP A + ++
Sbjct: 331 DVRCAHGATVSQLQEDELFYLRSRGIGASDAAALLLRGACQEVVEKLP--AHATAWRPLE 388
Query: 482 ISLEG 486
LEG
Sbjct: 389 RVLEG 393
>gi|329895579|ref|ZP_08271075.1| Iron-sulfur cluster assembly protein SufD [gamma proteobacterium
IMCC3088]
gi|328922258|gb|EGG29608.1| Iron-sulfur cluster assembly protein SufD [gamma proteobacterium
IMCC3088]
Length = 426
Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 130/401 (32%), Gaps = 22/401 (5%)
Query: 71 PSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQT 130
P W R P ID + A P + T L L
Sbjct: 18 PGWLR---PKIDVAAMALAATPIPNRKSEHWKYAPL----TGLVLPELEAHNGHLDAAAA 70
Query: 131 SKVA---VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+ ++ + + V + +L GV S+ V + +
Sbjct: 71 PDLGACRIEVTREGIQVNGSPSGQL-PPGVKVRDFSDLDELGAARVLDLMGSAAKDRSGI 129
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+ L+ A G ++ I L + T R L+ A S +E
Sbjct: 130 ISTLSDATLGLGLWIDIADDADISTPLQL--IWQQDSTWLSARLLVTAGRNCRASIIEHF 187
Query: 248 TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
A N V EL A + Y S G F +
Sbjct: 188 GA-GSLANSQQNGVTELFLAAGANLDYCR--------SNTHGSNQTFFGGVFAKLSRDAT 238
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
++ G+ + L G + E I + G + +D T + H A + TS
Sbjct: 239 LTAFAYAAGAKLCRNEWGLLFAGAGAHAELNGIYLPAGREVVDFHTTLEHAAAHCTSEET 298
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
+GI +N + G++ +H A + +LL + +T P +E + H
Sbjct: 299 FRGIIGDRANAIFNGRIHIHPDAQKTVAQLSNKNLLTSDQAQVNTKPELEIYANDVQCAH 358
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
AT ++I+DE + YC RGI E A LI GFV + +++
Sbjct: 359 GATVAQINDEAIHYCRTRGITESVAAQLIGIGFVVSLFERI 399
>gi|296394724|ref|YP_003659608.1| FeS assembly protein SufD [Segniliparus rotundus DSM 44985]
gi|296181871|gb|ADG98777.1| FeS assembly protein SufD [Segniliparus rotundus DSM 44985]
Length = 383
Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 101/260 (38%), Gaps = 16/260 (6%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
+ ++ G+ V+ + + AA +E++ D A + V + PG
Sbjct: 122 YAHHVVEVGAGAEVTIVAEHSGLA-----QIAANLEIILGDGANCTFVVVNDEDPGS--- 173
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ G + ++ G ++ + E +A+S Q
Sbjct: 174 -----TRLASYAALVGRDASYRAVEVALGGSLVRTVSTVRFAAPGGRAELCGVALSGDGQ 228
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGIS-AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
++S + H N TS ++ K + + G V + A + + +LL+
Sbjct: 229 HLESRLFVDHDQPNCTSNVLYKNALLTPAARTVWVGDVRIRPAATGTLTYELNRNLLLAK 288
Query: 407 NCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A ++P +E + + H +TT + +E +FY RG+ E+ A L+V GF EV+
Sbjct: 289 GARADSVPNLEIETGQIHGAGHASTTGRFDEEQMFYLRSRGLSEDEARRLVVRGFFGEVV 348
Query: 466 QKLPMEFAV-EAQKLIDISL 484
K+P E +L++ L
Sbjct: 349 AKIPDESVRARIAELVEGKL 368
>gi|78183985|ref|YP_376420.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
gi|78168279|gb|ABB25376.1| ABC transporter, membrane component [Synechococcus sp. CC9902]
Length = 397
Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats.
Identities = 55/288 (19%), Positives = 112/288 (38%), Gaps = 18/288 (6%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE-RTLIIADEGSYV 241
D++ N A + + V L +G R L++ +E + +
Sbjct: 109 SSDDWLVEFNHASAQQLLALRVRGTV---PPLEI---TMAAASGLIPTRVLLVVEEKAQL 162
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
L+ + H+ ++E+ A+ + + G+ +
Sbjct: 163 ELLQVFSGRGEAA---HSHLMEVHLGQEAQFNHGVL--------ACADGVAALFAQLAVE 211
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ RS ++T + G ++ P + Q+ +A+++ QQ+ T + +
Sbjct: 212 QEPRSTYNFTSVIQGWSLGRIEPRVVQVDGQASTTLKGLAVADLEQQLAVHTSVCFEGPD 271
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
+ K ++AG S+ + G ++V R A + +LL+ + T P +E
Sbjct: 272 GELDQLQKCLAAGRSHTIFNGAINVPRKAQRTNAAQLSRNLLLSDRARVDTKPELEIVAD 331
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H AT S++ ++ LFY RGI A AL++ G +EV+ +LP
Sbjct: 332 DVRCAHGATVSQLQEDELFYLRSRGIGASDAAALLLRGACQEVVDRLP 379
>gi|226306543|ref|YP_002766503.1| iron-sulfur cluster assembly protein SufD [Rhodococcus erythropolis
PR4]
gi|226185660|dbj|BAH33764.1| putative iron-sulfur cluster assembly protein SufD [Rhodococcus
erythropolis PR4]
Length = 406
Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 21/291 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + + + V + + T I + + +++
Sbjct: 107 DRIAAQAYSSFETATVISVGAEVEVEKPVVVTMTGPGVDNVAYGHTQIHLAQFAKATFVI 166
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+E V D++++ +Q+W VT
Sbjct: 167 DQRGSGTFAEN-----IEFVLGDSSQLTVVAIQDWADDAVH--------VTSHHARLNRD 213
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + +T + G + + G E + ++ Q ++ + H N S
Sbjct: 214 AVLRYTSISLGGDLVRLSATVKYDGPGGDAELLGLYFADAGQHLEQRLLVDHSQPNCKSN 273
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+V KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 274 VVYKGALQGDPGSGKPDAHTVWIGDVLIRAAAEGTDTFELNRNLVLTDGARADSVPNLEI 333
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ H + T + DE LFY RGIPE+ A L+V GF E++ K+
Sbjct: 334 ETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFHEIINKI 384
>gi|94676925|ref|YP_588901.1| cysteine desulfurase activator complex subunit SufD [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94220075|gb|ABF14234.1| FeS assembly protein SufD [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 432
Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats.
Identities = 54/297 (18%), Positives = 98/297 (32%), Gaps = 17/297 (5%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYL 244
L + + + + +P G P L R I + + +
Sbjct: 132 HLTECLSRETTRIRLPTGKIAPKPLYLLHISQASSDKNMLNMLHYRHHIEIEPHAMGQVI 191
Query: 245 EGCTA-PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
E D A + + +NA + + + + K Y+F G
Sbjct: 192 EHFVNLTTTDLAHFSGARITMDVRNNAHLSHIKL-------AGEKNNSYHFAHN-DITIG 243
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + + +T S L GE S S+ + D T + H
Sbjct: 244 LNAVVRDYSFIFSPGMTQHQTSMQLNGEGSDVLVKSLLLLTHQDISDICTYLEHNKGYCC 303
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S + K I+ + G + V++ A + ++LL+G H+ P +E
Sbjct: 304 SHQLHKLIALDQGQGMFNGLIKVNQEALKTNGKMINNNLLLGKLANIHSKPQLEIYTDDV 363
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
H T S +FY RGI + A +++ F +++ + EF QKLI
Sbjct: 364 KCSHGTTVSSFDHNQMFYLRSRGINKNDAQHTMISAFAADIIDTIGNEF---LQKLI 417
>gi|256847559|ref|ZP_05553005.1| FeS assembly protein SufD [Lactobacillus coleohominis 101-4-CHN]
gi|256716223|gb|EEU31198.1| FeS assembly protein SufD [Lactobacillus coleohominis 101-4-CHN]
Length = 383
Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats.
Identities = 62/324 (19%), Positives = 124/324 (38%), Gaps = 20/324 (6%)
Query: 165 AICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
A ++P+LV++ L + N AL+ A G FVY+P + +
Sbjct: 75 AAQQYPELVQENLMEKAINWQANQLNALHLAFLNGGRFVYVPNNTVVDQPIEL----HAT 130
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
+G LI+ S V+ +E A + + L EL+ D+A++ Y +
Sbjct: 131 VSGCNYHNLIMVGANSKVTIIENEVASDQQPSYL---GTELLLGDSAQVNYYQSNTFTAD 187
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
+ Y + S ++ L G+ S F + I+
Sbjct: 188 HNWESVRAY---------QAGDSLLNIYSAFFDRHHLEADYHANLDGDGSHANFKMVGIA 238
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q D T++ + +T I+ G+ + + +++GA S + + L
Sbjct: 239 THDQVQDIHTRIDNHGLHTDGEILQNGVVKDQAILNFHAVGKIYQGAHQSASNQESRLLT 298
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ P + +++ N H A+ +++ + L+Y RG+ A L+ GF+
Sbjct: 299 LTAASHGEADPVLLIEDNDVNAGHAASIGQVNPDQLYYLQSRGLTLMEAEILLTKGFLLP 358
Query: 464 VLQKLPMEFAVE--AQKLIDISLE 485
V++K P + + +L++ LE
Sbjct: 359 VIEKFPDQQLRDQTINELLE-RLE 381
>gi|71083444|ref|YP_266163.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1062]
gi|71062557|gb|AAZ21560.1| FeS assembly protein sufD [Candidatus Pelagibacter ubique HTCC1062]
Length = 414
Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats.
Identities = 74/431 (17%), Positives = 143/431 (33%), Gaps = 46/431 (10%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E+R ++ P+ R F DL +I +D E +
Sbjct: 24 EFRKKNLINFIDKGFPNK---RIEDWKFSDLNQII-SSNIKNLSFYNDKTYEPKD--QVS 77
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
I E + + VD ++ + + L + + S I
Sbjct: 78 LINKFEHNKIIFINGVISKVDIKYEDDT------KVLINNDLDLSNNSNGI--------- 122
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERTLI 233
N +LN A+ + + + + L Y E T RT I
Sbjct: 123 ----------NPLVSLNHALVSAHIGIIVKENYSLNKPLVLYNITTEDVNSTALNLRTDI 172
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
++ S + + ++ ++ +A +K + D + I
Sbjct: 173 KLEKNSNLKLVTIFDDQSQNNFININQNFDI--AQDAILKSYKI------DHKTNSNIKY 224
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
F S TGS +C L + S + Q + T
Sbjct: 225 FYN--NINLEKNSISENFIFSTGSKFIKNEVNCNLNDQYSSAFINGVISLKNSQHHEIKT 282
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ HLA+NT S + K + S Y+GK+ V + A + + +LL+ N
Sbjct: 283 NINHLAENTKSYQLIKTVLNDNSKGIYQGKIFVDQKAQKTNGYQLSKALLLNENTEFDGK 342
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H +T+ + ++ +FY + RG+ + + L++NGF+ + ++ +
Sbjct: 343 PELEIYADDVKCSHGSTSGNLDEDSIFYLMSRGLSYQQSKELLINGFLMDAVETITD--- 399
Query: 474 VEAQKLIDISL 484
+E + LI +
Sbjct: 400 LEIKNLIKEMM 410
>gi|254455408|ref|ZP_05068837.1| FeS assembly protein SufD [Candidatus Pelagibacter sp. HTCC7211]
gi|207082410|gb|EDZ59836.1| FeS assembly protein SufD [Candidatus Pelagibacter sp. HTCC7211]
Length = 414
Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats.
Identities = 64/422 (15%), Positives = 132/422 (31%), Gaps = 46/422 (10%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
++ P+ F DL D + T + + E
Sbjct: 30 LDNFINRGFPNRREED---WKFSDLNQIIKKDIGELSFYSDFTHTNKVDT--SVFVDGLE 84
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ + +D ++ + + T+
Sbjct: 85 HNKIVFINGRIEKIDFDYE--------------------------QKDKIEIIDQSETIN 118
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERTLIIADEGS 239
+ +N + LN A + + G + L Y N K R D+ S
Sbjct: 119 KLNNNSLSDLNHAFTNKSFKILVKNGYQLAKPLIIYHTTNSKIWSKNINLRLEFELDKNS 178
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ ++ +NA +K V + + +
Sbjct: 179 SLRLIDLFNDTSEKNFL--NIFYNFYLKENAILKNYKVDRFDNKNIKYSFN--------N 228
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ S L GS +C L G+ S I N + + T + HL
Sbjct: 229 IEQDKDSISETFILSAGSNFFKNEINCNLNGKYSSAFVNGIFSLNDNKHHEIRTIINHLT 288
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+NT S + K + + Y+GK+ V+ A + + ++L+ + P +E
Sbjct: 289 ENTKSYQLIKSVLEDSAKAAYQGKIFVNSDAQKTDGYQLSKAILLNKESEFNAKPELEIY 348
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H + + ++++ +FY + RG+ + + L++NGF+ +V++K+ E + L
Sbjct: 349 ADDVKCSHGSASGSLNEDSIFYLMSRGLNYQQSRELLINGFLLDVVEKITDP---EIKNL 405
Query: 480 ID 481
I
Sbjct: 406 IK 407
>gi|325068999|ref|ZP_08127672.1| FeS assembly protein SufD [Actinomyces oris K20]
Length = 419
Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats.
Identities = 68/387 (17%), Positives = 129/387 (33%), Gaps = 23/387 (5%)
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMP--IS 163
+ +++ IP+ T +FD ++ + +GV
Sbjct: 29 ADRPTSFDPADIPVPRGREEEWRFTPMKRFAPLFDLDAIRAATAGQ-SDAGVRIETDLPD 87
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
E + TV D + + + + G + +
Sbjct: 88 GVSLETVARSDARIGTVGAPVDRTGVTAWN-GTETATVLTLEPGAQLERAARLNIIGQDA 146
Query: 224 GTGQ--FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
+ L+ A+ GS + + T VE+ D AE+ TVQ W
Sbjct: 147 QLAHPTAQHILVAAEAGSKGTVVLDHTGTAALTQG-----VEVTVADGAELTLVTVQGWE 201
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
G + C R + + P GE + Y +
Sbjct: 202 DGAVHASN------HRVKVC--DRGVLKHVVVSL-GGDVRICPDLGFSGEGGHIDAYGVY 252
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCD 400
++ Q + + H + SR+ KG G ++ + G + + A + +
Sbjct: 253 FTDAGQHQEHRPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNR 312
Query: 401 SLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+L++ A ++P +E +N + H + T + D+ LFY RGIPE A L+V G
Sbjct: 313 NLVLTEGAKADSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLG 372
Query: 460 FVREVLQKLPMEFAVE-AQKLIDISLE 485
F E++ ++ ++ E I+ LE
Sbjct: 373 FFNEIVAEIGVDEVEERLMAAIEKELE 399
>gi|224126311|ref|XP_002329523.1| predicted protein [Populus trichocarpa]
gi|222870232|gb|EEF07363.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 14/244 (5%)
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
D+ V+E+V A++++S VQ+ + K + S
Sbjct: 21 NDDKRYWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTA--------VRQEAASSYEL 72
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
++ TG ++ G + E + +S G Q D ++++ S+ + K
Sbjct: 73 VEVSTGGKLSRHNLHVQQLGPDTATELSTFHLSVGDQTQDLHSRLVLDHPRGYSQQLHKC 132
Query: 371 ISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
I A + G V V+R A + SLL+ + P ++ H A
Sbjct: 133 IVAHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNIKPNLQIIADDVKCSHGA 192
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF---AVE--AQKLIDISL 484
S + + LFY RGI E A +V F EV++KLP F VE + L+D S
Sbjct: 193 AISDLEETQLFYFQARGIDLETARKALVFSFGAEVIEKLPYSFIRKQVENHVKGLLDSSF 252
Query: 485 EGSV 488
+GS+
Sbjct: 253 KGSL 256
>gi|306822860|ref|ZP_07456236.1| FeS assembly protein SufD [Bifidobacterium dentium ATCC 27679]
gi|309801176|ref|ZP_07695305.1| FeS assembly protein SufD [Bifidobacterium dentium JCVIHMP022]
gi|304553492|gb|EFM41403.1| FeS assembly protein SufD [Bifidobacterium dentium ATCC 27679]
gi|308222065|gb|EFO78348.1| FeS assembly protein SufD [Bifidobacterium dentium JCVIHMP022]
Length = 407
Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats.
Identities = 61/313 (19%), Positives = 111/313 (35%), Gaps = 19/313 (6%)
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A E L V D A ++ + + N
Sbjct: 87 ATFERVALGDAGTGIVSKPNDRVSAVEWNSGKQATV---LKLEGEIEQPVLVKVHGNGFD 143
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
F +IIA + ++ + R VE+ ++ I + +Q W G
Sbjct: 144 MDAF-HLVIIAADHAHADVVVEHDGDARIAEG-----VEISTGRDSHISTTFIQEWSKGS 197
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
Q V + G + + + + G + GEQ I +
Sbjct: 198 KQ--------VGNQRIHMGEGASLRHSVVTLGGDVVRIRMDQDFGGEQGDLNMLGIYFVD 249
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+ I+ T ++H SR+V KG G ++T+ G + A + ++ +L+
Sbjct: 250 PGEHIEHRTMIVHNHPECRSRVVYKGALDGKDAHSTWVGNALIAPTAPGTDSYELNRNLM 309
Query: 404 IGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ A + P +E +N + H ++ + DE LFY RGIPE A L+V GF
Sbjct: 310 LMPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPEVEARKLVVRGFFG 369
Query: 463 EVLQKLPMEFAVE 475
E+++++ + E
Sbjct: 370 ELVEEIGIPAISE 382
>gi|284161484|ref|YP_003400107.1| SufBD protein [Archaeoglobus profundus DSM 5631]
gi|284011481|gb|ADB57434.1| SufBD protein [Archaeoglobus profundus DSM 5631]
Length = 343
Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats.
Identities = 74/328 (22%), Positives = 145/328 (44%), Gaps = 25/328 (7%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
V M +A+ E + +K Y ++ + + DG F+ +PKGV+ +
Sbjct: 35 RNVEVMSTKQAL-EKYEWLKDYSWKLIEREEGEF---------DGYFIRVPKGVKVDFPV 84
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ ++ Q ++IA+E S ++ + GC + LH + E NA++ +
Sbjct: 85 EACLYL-KRVKSQKVHNIVIAEEDSELNLITGC--TSERLSGLHLGISEFYVKRNAKVTF 141
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + NW + + IS L + YP+ L + +
Sbjct: 142 TMIHNWKKKNEV-------LPKTAIKVEENGTFISNYVLLSPVKYLKAYPTAYLD-KNAK 193
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
F S+ + +ID G+++ + +++ I+S+ IS G RG + A +
Sbjct: 194 VVFSSVIVGFEDSEIDLGSRVYLNGEGSSAEIISRSISKGGKIVA-RG--HIIGNAEGVK 250
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+C +++G H IP +E++N + +L HEA KI+++ +FY + RG+ + AI+
Sbjct: 251 GHLECKGMILG-GGIIHAIPELEARNPNVDLSHEAAIGKIAEDEIFYLMTRGLSRDEAIS 309
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDI 482
LI+ GF+ ++ LP E K I++
Sbjct: 310 LIIRGFMEIDIKGLPEVLKKEIDKAIEL 337
>gi|297242846|ref|ZP_06926784.1| cysteine desulfurase activator SufD [Gardnerella vaginalis AMD]
gi|296889057|gb|EFH27791.1| cysteine desulfurase activator SufD [Gardnerella vaginalis AMD]
Length = 415
Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 104/279 (37%), Gaps = 16/279 (5%)
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
+ + N +I AD S + T + VE++
Sbjct: 145 EIKKPIVLKIQGNNVNALDALHLVIEADPRSNADIIIEHTGCAKLAEG-----VEIILGK 199
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
+A + + +Q W G V + G + + T + G +
Sbjct: 200 HAHVSTTFIQEWDSGSKH--------VGNQRIHVGEGASLRHTMVTLGGDVVRIRMDQDF 251
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVH 387
GEQ + + + ++ T ++H SR+V KG G ++T+ G +
Sbjct: 252 GGEQGDLNMLGMYFVDPGEHVEHRTMVVHNYPECKSRVVYKGALEGKGAHSTWVGNALIK 311
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRG 446
A + ++ +L++ A + P +E +N + H ++ + DE LFY RG
Sbjct: 312 PEAPGTDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRG 371
Query: 447 IPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
+ E A L+V GF E+++++ + E K I+ L
Sbjct: 372 VSEIEARKLVVRGFFNELIEEIGVPEIVDHLMKAIERRL 410
>gi|229493674|ref|ZP_04387459.1| FeS assembly protein SufD [Rhodococcus erythropolis SK121]
gi|229319635|gb|EEN85471.1| FeS assembly protein SufD [Rhodococcus erythropolis SK121]
Length = 406
Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 21/291 (7%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ AA + F + + + V + + T I + + +++
Sbjct: 107 DRIAAQAYSSFETATVISVGAEVEVEKPVVVTMTGPGVDNVAYGHTQIRLAQFAKATFVI 166
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
+E V D++++ +Q+W VT
Sbjct: 167 DQRGSGTFAEN-----IEFVLGDSSQLTVVAIQDWADDAVH--------VTSHHARLNRD 213
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + +T + G + + G E + ++ Q ++ + H N S
Sbjct: 214 AVLRYTSISLGGDLVRLSATVKYDGPGGDAELLGLYFADAGQHLEQRLLVDHSQPNCKSN 273
Query: 366 IVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+V KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 274 VVYKGALQGDPGSGKPDAHTVWIGDVLIRAAAEGTDTFELNRNLVLTDGARADSVPNLEI 333
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ H + T + DE LFY RGIPE+ A L+V GF E++ K+
Sbjct: 334 ETGEIVGAGHASATGRFDDEQLFYLRARGIPEDQARRLVVRGFFHEIINKI 384
>gi|262165766|ref|ZP_06033503.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus VM223]
gi|262025482|gb|EEY44150.1| iron-sulfur cluster assembly protein SufD [Vibrio mimicus VM223]
Length = 417
Score = 179 bits (454), Expect = 8e-43, Method: Composition-based stats.
Identities = 62/356 (17%), Positives = 114/356 (32%), Gaps = 14/356 (3%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
L + L +++ L + ++ + V + E VI I +
Sbjct: 51 LNEFALLSFQAADKQPLTPETLAWLSHFEGYRLVFSNGAWLSEWSD--VIPGVTITPIEQ 108
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQ 227
+ K ++ V +A L A G + + + G
Sbjct: 109 WNEQQLKQVNQSV--QGEAFALLTDATANAGIHLEVSCEFVADKPIYLLHVQTSNRGVLC 166
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R + + E + + V + A+++++ V
Sbjct: 167 SYRHHLELARLTQCQLYEHYFSLDESHGVTCSRVSA-NIAEGAQLEHAKVIEEGSQQHHF 225
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
S+ + + S LL G + + +S+++
Sbjct: 226 AHN--------DLRLTRDSQAQSHSFLLRGQLIRQQTSTLLAGTGAEVQMHSLSLPEANT 277
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
DS T + H A + S K IS SN + G + V +GA + +LL+GN+
Sbjct: 278 TSDSRTFLRHQAAHCRSYQSHKVISKEESNAVFHGLILVDKGALKTDGQMDNHNLLLGNH 337
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
++ P +E H ATT +I E LFY RGI A+ ++ F E
Sbjct: 338 SQVNSQPQLEIYADDVKCSHGATTGQIDPEQLFYLQARGIERAKALHMLTYAFAGE 393
>gi|313622552|gb|EFR92960.1| FeS assembly protein SufB [Listeria innocua FSL J1-023]
Length = 125
Score = 179 bits (454), Expect = 9e-43, Method: Composition-based stats.
Identities = 60/125 (48%), Positives = 81/125 (64%)
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
IVSK IS N TYRG V R A +R+ +CD+L++ N + TIPY E NS+ +
Sbjct: 1 TIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNIS 60
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
LEHEA SK+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +
Sbjct: 61 LEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEM 120
Query: 485 EGSVG 489
EGS+G
Sbjct: 121 EGSIG 125
>gi|171743055|ref|ZP_02918862.1| hypothetical protein BIFDEN_02181 [Bifidobacterium dentium ATCC
27678]
gi|283455934|ref|YP_003360498.1| FeS assembly protein SufD [Bifidobacterium dentium Bd1]
gi|171278669|gb|EDT46330.1| hypothetical protein BIFDEN_02181 [Bifidobacterium dentium ATCC
27678]
gi|283102568|gb|ADB09674.1| FeS assembly protein SufD [Bifidobacterium dentium Bd1]
Length = 407
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/313 (19%), Positives = 111/313 (35%), Gaps = 19/313 (6%)
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A E L V D A ++ + + N
Sbjct: 87 ATFERVALGDAGTGIVSEPNDRVSAVEWNSGKQATV---LKLEGEIEQPVLVKVHGNGFD 143
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
F +IIA + ++ + R VE+ ++ I + +Q W G
Sbjct: 144 MDAF-HLVIIAADHAHADVVVEHDGDARIAEG-----VEISTGRDSHISTTFIQEWNKGS 197
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
Q V + G + + + + G + GEQ I +
Sbjct: 198 KQ--------VGNQRIHMGEGASLRHSVVTLGGDVVRIRMDQDFGGEQGDLNMLGIYFVD 249
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+ I+ T ++H SR+V KG G ++T+ G + A + ++ +L+
Sbjct: 250 PGEHIEHRTMIVHNHPECRSRVVYKGALDGKDAHSTWVGNALIAPTAPGTDSYELNRNLV 309
Query: 404 IGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ A + P +E +N + H ++ + DE LFY RGIPE A L+V GF
Sbjct: 310 LTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPEVEARKLVVRGFFG 369
Query: 463 EVLQKLPMEFAVE 475
E+++++ + E
Sbjct: 370 ELVEEIGIPAISE 382
>gi|159902620|ref|YP_001549964.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
gi|159887796|gb|ABX08010.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9211]
Length = 408
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 66/378 (17%), Positives = 137/378 (36%), Gaps = 20/378 (5%)
Query: 95 IVGPQSLDDVDPELLRTYEKLGIPIR-EQEILAGVQTSKVAVDAVFDSVSVVTTFKEELK 153
+ +D + + L + R E + + S ++ E
Sbjct: 37 NNKLEEWKLIDTKKINNILSLPMSKRIEPKDIDQTIPQLAKNSFRIIINSNISKLDEASL 96
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
G+ M E + ++ +LN + + I + +E
Sbjct: 97 PKGMSLMMGDELQRYLK-----KADEHIDPSHDWILSLNHSSNNQLIALRISESNSTGLE 151
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
L F R LII ++G+ ++ LE H+ V E+ +N+++
Sbjct: 152 LVI---PKNINQLSFSRVLIIVEKGANLNLLE---IILGANKSAHSHVCEIHLDNNSKVH 205
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+ + S G + S + + G ++ P+ + +
Sbjct: 206 HGLIAMGREDSSLFAG--------ISIFQKSDSNYFFNSFQEGWDLSHLKPTIIQLEGSA 257
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ + ++ QQ+ + + + T R + K I+ S++ + G + V + A +
Sbjct: 258 LTDLQGLQVAKDSQQLSTHSAVKFDGPGGTLRQLQKAIALDKSHSIFNGLIEVPKLAQKT 317
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+LL+ N T P ++ + H AT S + ++ LFY RG+ E A
Sbjct: 318 NASQLSKNLLLSNRAQIDTKPELKIIADDVSCTHGATISNLQEDELFYLQSRGLSAENAA 377
Query: 454 ALIVNGFVREVLQKLPME 471
ALIVNG+ +E+++ +P+E
Sbjct: 378 ALIVNGYAKEIIRNIPLE 395
>gi|11499942|ref|NP_071187.1| hypothetical protein AF2365 [Archaeoglobus fulgidus DSM 4304]
gi|6686231|sp|O30305|Y2365_ARCFU RecName: Full=UPF0051 protein AF_2365
gi|2650732|gb|AAB91300.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 369
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/327 (21%), Positives = 143/327 (43%), Gaps = 14/327 (4%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV M I +A+ E D VK Y ++ + + + +G F+ G + + +
Sbjct: 51 GVEVMSIKQAM-EKYDWVKDYFWKILRKDQDEFTRMADTEDVNGYFIRSLPGAKVEIPVE 109
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + + ++IA+EGS ++ + GCT+ +H + E NA++ ++
Sbjct: 110 ACLYLKKVEKQRV-HNIVIAEEGSELNIISGCTSHPG-VAGMHIGISEFFVKKNAKLSFT 167
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ +W + IS L + YP+ + + +
Sbjct: 168 MIHSWDTTIEVRPRTA-------IKVEEGGTFISNYILLNPVKLVQTYPTAYVEKD-ATA 219
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
F S+ ++ +DSG++ + + +N+ + I+S+ IS G RG + A +
Sbjct: 220 IFNSVIVALEGSVVDSGSRAVLMGENSRAEIISRTISKGGKI-IARG--HIIGDAPEVKG 276
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+C L++ + IP +E++ + L HEA KI++E +FY + RG+ + AI+
Sbjct: 277 HLECKGLMLSESGLIDAIPELEARYPNVELSHEAAIGKIAEEGIFYLMSRGLSRDEAISA 336
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDI 482
IV GF+ ++ LP ++ I++
Sbjct: 337 IVRGFMEIEIKGLPEALQEAIRRTIEM 363
>gi|258623336|ref|ZP_05718341.1| Protein sufD [Vibrio mimicus VM573]
gi|258584396|gb|EEW09140.1| Protein sufD [Vibrio mimicus VM573]
Length = 417
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/356 (17%), Positives = 114/356 (32%), Gaps = 14/356 (3%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
L + L +++ L + ++ + V + E VI I +
Sbjct: 51 LNEFALLSFQAADKQPLTPETLAWLSHFEGYRLVFSNGAWLSEWSD--VIPGVTITPIEQ 108
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK-GTGQ 227
+ K ++ V +A L A G + + + + G
Sbjct: 109 WNEQQLKQVNQSV--QGEAFALLTDATANAGIHLEVSREFVADKPIYLLHVQTANRGVLC 166
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R + E + + V + A+++++ V
Sbjct: 167 SYRHHLELARLVRCQLYEHYFSLDESHGVTCSRVSA-NVAEGAQLEHAKVIEEGSQQHHF 225
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
S+ + + S LL G + + +S+++
Sbjct: 226 AHN--------DLRLTRDSQAQSHSFLLRGQLIRQQTSTLLAGTGAEVQMHSLSLPEANT 277
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
DS T + H A + S K I+ SN + G + V +GA + +LL+GN+
Sbjct: 278 TSDSRTFLRHQAAHCRSYQSHKVIAKEESNAVFHGLILVDKGALKTDAQMDNHNLLLGNH 337
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
++ P +E H ATT +I E LFY RGI A+ ++ F E
Sbjct: 338 SQVNSQPQLEIYADDVKCSHGATTGQIDPEQLFYLQARGIEHAKALHMLTYAFAGE 393
>gi|90417690|ref|ZP_01225602.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337362|gb|EAS51013.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 411
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 11/239 (4%)
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
EG+ +++E V L D AE+ + Q +
Sbjct: 168 VGEGARATFVERIEGNATGA--PSTGVSHLTIADGAEVLWIIDQAKGMSAAHLG------ 219
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ G + L +G A+ GE S + + Q +D T
Sbjct: 220 --QLNVTVGANAVFKLFVLNSGGALVRNEVHVESVGENSEIRIRGVNLLTEGQHVDVTTT 277
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H NTT+ + + G + ++G + V + A + C++LL+ + P
Sbjct: 278 LRHQVPNTTATETFRNVVTGG-HGVFQGMIKVAKDAQKTDAKMACNTLLLSDQGDFSAKP 336
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
+E H AT +I+ +HLFY + RGIPE+ A AL+V FV EV+++L E A
Sbjct: 337 ELEIFADDVQCGHGATAGEINADHLFYLMSRGIPEKPARALLVKAFVAEVVEELEDEAA 395
>gi|320533895|ref|ZP_08034477.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133921|gb|EFW26287.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 407
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 60/317 (18%), Positives = 110/317 (34%), Gaps = 20/317 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ--FERT 231
L TV D + + + + G + + + +
Sbjct: 86 DARLGTVGAPVDRTGVTAWN-GTETATVLTLEPGAQLERAARLNIIGQDAQLARPTAQHI 144
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+ A+ GS + + T VE+ D AE+ TVQ W
Sbjct: 145 LVAAESGSRGTVVLDHTGTAALTQG-----VEVTVADGAELTLVTVQGWEDEAVHASNH- 198
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
R G + + P GE + Y + ++ Q +
Sbjct: 199 ------RVKVCGR-GVLKHVVVSL-GGDVRICPDLGFSGEGGHIDAYGVYFTDSGQHQEH 250
Query: 352 GTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ H + SR+ KG G ++ + G + + A + + +L++ A
Sbjct: 251 RPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNRNLVLTEGAKA 310
Query: 411 HTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
++P +E +N + H + T + D+ LFY RGIPE A L+V GF E++ ++
Sbjct: 311 DSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLGFFNEIVAEIG 370
Query: 470 MEFAVE-AQKLIDISLE 485
++ E I+ LE
Sbjct: 371 VDEVEERLMAAIEKELE 387
>gi|326773144|ref|ZP_08232427.1| FeS assembly protein SufD [Actinomyces viscosus C505]
gi|326636374|gb|EGE37277.1| FeS assembly protein SufD [Actinomyces viscosus C505]
Length = 419
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 99/259 (38%), Gaps = 17/259 (6%)
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
L+ A+ GS + + T VE+ D AE+ TVQ W G
Sbjct: 155 HILVAAEAGSKGTVVLDHTGTAALTQG-----VEVTVADGAELTLVTVQGWEDGAVHASN 209
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ C R + + P GE + Y + ++ Q
Sbjct: 210 ------HRVKVC--DRGVLKHVVVSL-GGDVRICPDLGFSGEGGHIDAYGVYFTDAGQHQ 260
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+ + H + SR+ KG G ++ + G + + A + + +L++
Sbjct: 261 EHRPYVAHTEPHCYSRVTYKGALQGEGAHAVWVGDCLIGQAARGTDTYELNRNLVLTEGA 320
Query: 409 GAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
A ++P +E +N + H + T + D+ LFY RGIPE A L+V GF E++ +
Sbjct: 321 KADSVPNLEIENGNIEGAGHASATGRFDDQQLFYLRARGIPETEARRLVVLGFFNEIVAE 380
Query: 468 LPMEFAVE-AQKLIDISLE 485
+ ++ E I+ LE
Sbjct: 381 IGVDEVEERLMAAIEKELE 399
>gi|304391539|ref|ZP_07373481.1| FeS assembly protein SufD [Ahrensia sp. R2A130]
gi|303295768|gb|EFL90126.1| FeS assembly protein SufD [Ahrensia sp. R2A130]
Length = 423
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 13/303 (4%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFERTLIIADEGSYV 241
+ + +N+AV G V I GV L T R + A GS
Sbjct: 125 SNADATSLINAAVAIGGVTVEIADGVEVDRVLGLAHAQTGAANTASGTRFAVNAGAGSKA 184
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
+ +E P + + V ++ + A + Y + + GD+ + G +
Sbjct: 185 TVIERACGPNGNGYLNSSHV-DITVGEGATLTY--ILSIEEGDAASRMG------RLTVD 235
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G + I+ L G + + RGE E I + G ID + + H N
Sbjct: 236 LGKDATINLFVLNAGGKLVRQEIVFDCRGEGGHVEIAGINLVGGEAHIDVTSTINHHVAN 295
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
TT+ + + + G ++G+++V + A + C++LL+ ++C P +E
Sbjct: 296 TTANELFRNVCTGRGRGVFQGQINVAQPAQLTDAKMACNTLLLSDDCDFSAKPELEIFAD 355
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
H AT + + +LFY + RGI E A L++ FV E + + E EA ++
Sbjct: 356 DVQCGHGATVTDLEPSYLFYLMARGISETRARRLLIKAFVAEAFEPMEDEKLEEA---LE 412
Query: 482 ISL 484
+
Sbjct: 413 ARM 415
>gi|213421725|ref|ZP_03354791.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 190
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/197 (46%), Positives = 127/197 (64%), Gaps = 21/197 (10%)
Query: 22 GFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAI 81
GF T + D+ KG++E+++R ISAK+NEPDWMLE+RL AYR WL M +P W + Y +
Sbjct: 2 GFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFRLNAYRAWLDMDEPHWLKAHYDKL 61
Query: 82 DFDDLYYYAAPKSIVGPQSLDDVD-------------PELLRTYEKLGIPIREQEILAGV 128
++ D YY+AP S E+ +E+LG+P+RE +
Sbjct: 62 NYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLSKEVEDAFEQLGVPVREGK----- 116
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
+VAVDA+FDSVSV TT++E+L + G+IF EAI +HPDLV+KYL TVVP DNF+
Sbjct: 117 ---EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPDLVRKYLGTVVPGNDNFF 173
Query: 189 AALNSAVFTDGSFVYIP 205
AALN+AV +DG+F+Y+P
Sbjct: 174 AALNAAVASDGTFIYVP 190
>gi|325002897|ref|ZP_08124009.1| FeS assembly protein [Pseudonocardia sp. P1]
Length = 374
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 52/308 (16%), Positives = 103/308 (33%), Gaps = 22/308 (7%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D AA S + + ++ G I + +
Sbjct: 78 PFDRVAAAAWSGFTEATVVTLDGEKLD---PVTITVEGPGAGATAAGHLHIRTTPHTQAT 134
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+ + E+V D + + + W YN
Sbjct: 135 VVVEHRGSGVLADN-----TEVVLGDGSRLTLVVTEEWADDAVHVGAEHYN--------V 181
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + + T ++ G + + G E + ++ Q ++ + H N
Sbjct: 182 GRDATLRATAVQLGGDLVRVSSTIRYAGPGGDAELLGLGFTDAGQHLEQRLLVDHAVPNC 241
Query: 363 TSRIVSKGIS----AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
S ++ K ++ + G V + A ++ F +L++ + A ++P +E
Sbjct: 242 KSNVLYKNALQSDSKDSAHVVWIGDVLIRAAAENTETFEFNRNLVLTEHARADSVPNLEI 301
Query: 419 KNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEA 476
+ + H + T + DE LFY RGIPE+ A L+V GF E+L K+ + E
Sbjct: 302 ETGEIVSAGHASATGRFDDEQLFYLRSRGIPEDQARRLVVRGFFGEILNKITLPELRERL 361
Query: 477 QKLIDISL 484
+ ++ L
Sbjct: 362 EAAVEAEL 369
>gi|212716048|ref|ZP_03324176.1| hypothetical protein BIFCAT_00961 [Bifidobacterium catenulatum DSM
16992]
gi|212661415|gb|EEB21990.1| hypothetical protein BIFCAT_00961 [Bifidobacterium catenulatum DSM
16992]
Length = 407
Score = 177 bits (450), Expect = 3e-42, Method: Composition-based stats.
Identities = 57/314 (18%), Positives = 111/314 (35%), Gaps = 20/314 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
V D A ++ G + + F +I
Sbjct: 96 DADTGVVSKPCDRVSAVQWNSTSRAGI---LHIEGEIEQPVLVKVHGAGTDLDAF-HLVI 151
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA + ++ + R VE++ ++ + + +Q W G +
Sbjct: 152 IAADRAHADVVVEHDGDARIAEG-----VEILTGKDSHVSTTFIQEWNKGSKHVGNQRIH 206
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G + + + + G + G+Q I + + I+ T
Sbjct: 207 L--------GEGASLRHSVVTLGGDVVRIRMDQDFGGDQGDLNMLGIYFVDPGEHIEHRT 258
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
++H SR+V KG G ++T+ G + A + ++ +L++ A +
Sbjct: 259 MIVHNHPECKSRVVYKGALDGKGAHSTWVGNALIAPTAPGTDSYELNRNLVLTPGAIADS 318
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E +N + H ++ + DE LFY RGIPE A L+V GF E+++++ +
Sbjct: 319 EPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPETEARKLVVRGFFGELVEEIGIP 378
Query: 472 FAVE-AQKLIDISL 484
E +ID L
Sbjct: 379 AISEHLMNVIDRRL 392
>gi|229817692|ref|ZP_04447974.1| hypothetical protein BIFANG_02964 [Bifidobacterium angulatum DSM
20098]
gi|229785481|gb|EEP21595.1| hypothetical protein BIFANG_02964 [Bifidobacterium angulatum DSM
20098]
Length = 407
Score = 177 bits (450), Expect = 3e-42, Method: Composition-based stats.
Identities = 54/299 (18%), Positives = 105/299 (35%), Gaps = 19/299 (6%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L + TV D A ++ T + +
Sbjct: 94 LGEGLSGTVSKPSDRVSAVEWNSGATATIVELAGE----IKQPVLVKVHGAGLDLDAFHL 149
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+I A + ++ + R VE++ + + + +Q W G
Sbjct: 150 VIAAADNAHADVVVEHDGDARLAEG-----VEIITGKYSHVSTTFIQEWNTGSKH----- 199
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V G + + + G + GEQ+ I + + I+
Sbjct: 200 ---VGNHRIRVGEGASLRHAVVTLGGDVVRIRMDQDFDGEQADLNMLGIYFVDPGEHIEH 256
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T ++H SR+V KG G ++T+ G + A + ++ +L++ A
Sbjct: 257 RTMVVHNHPECKSRVVYKGALDGKGAHSTWVGNALIEPTAPGTDSYELNRNLVLTPGAIA 316
Query: 411 HTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ P +E +N + H ++ + +DE LFY RGI E A L+V GF E+++++
Sbjct: 317 DSEPNLEIENGNIVGAGHASSVGRFNDEELFYLESRGISETEARKLVVRGFFNELVEEI 375
>gi|255635600|gb|ACU18150.1| unknown [Glycine max]
Length = 276
Score = 177 bits (450), Expect = 3e-42, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 91/245 (37%), Gaps = 11/245 (4%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDEN--QLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
R L++ ++G++V+ +E A ++N A E V A++ +S +Q +
Sbjct: 19 NPRVLVVVEKGAHVNIIEDFPASPENQNDSYWSNAAFEAVIGQGAKLTHSYIQTQSFRAA 78
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
K + S T++ TG + G + E ++ +S
Sbjct: 79 HIKWT--------SIRQEASSTYELTEVSTGGKLGRHNLHIQQLGPDTVTELSTLHLSVA 130
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q D + ++ SR + K I + G + V+R A + +LL+
Sbjct: 131 DQTQDLHSTLVLDHPRGYSRQLHKCIVTHSQGQAVFDGNIKVNRYAQQTDAGQLTRTLLL 190
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ P ++ H A S + + L Y RGI E A ++V F EV
Sbjct: 191 EPRATVNVKPNLQIVADDVKCSHGAAISDLEESQLLYFQARGIDIETARRVLVFAFGSEV 250
Query: 465 LQKLP 469
+ K P
Sbjct: 251 IDKFP 255
>gi|88604082|ref|YP_504260.1| SufBD [Methanospirillum hungatei JF-1]
gi|88189544|gb|ABD42541.1| SufBD [Methanospirillum hungatei JF-1]
Length = 369
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 75/371 (20%), Positives = 144/371 (38%), Gaps = 15/371 (4%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L + +++ L G++ F + G+ F+ + A+ ++P
Sbjct: 6 MTDLSLEDQKRLALTGLEVEMKNRSGSFFQKDQDVCHVTSDCE-GIEFLTFTMALEKYP- 63
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFT-DGSFVYIPKGVRCPMELSTYFRINEKGTGQFER 230
V Y+ V + Y ++ G + KG + L + Q
Sbjct: 64 WVSDYIWKAVSKDKDKYTRYVASRPDPKGFVIIAKKGTKSIYPLQACLFL-SDSAIQHVH 122
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
++IA+E S + + GCT+ ++ H V E+ A++ + + NW
Sbjct: 123 NIVIAEEDSELHIISGCTSSSGRKSGAHLGVTEIYVGKGAKVTSTMIHNWGK-------N 175
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
I + +S P C L+GE + G F S+ + +D
Sbjct: 176 IAVYPRSAAIVEENGVFLSNYVCMEPVRKIQMAPLCTLKGEGAIGRFSSVVVCTPGSFMD 235
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
G+ + AK T++ ++++ I+ G + + RG + ++ +C L++ +
Sbjct: 236 LGSTAVLGAKGTSAELITRAITTGGTILS-RG--RIDGKVKGTKGHIECKGLILRDG-TI 291
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
H IP I+ L HEA KI+ + + Y + RG+ EE A A I+ GF+ ++ LP
Sbjct: 292 HAIPEIKGDVVDTELSHEAAVGKIARDEIEYLMARGLDEETATATIIRGFLDVKVEGLPD 351
Query: 471 EFAVEAQKLID 481
+ ID
Sbjct: 352 VLQDQIDAAID 362
>gi|222148791|ref|YP_002549748.1| transport system [Agrobacterium vitis S4]
gi|221735777|gb|ACM36740.1| transport system [Agrobacterium vitis S4]
Length = 424
Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats.
Identities = 70/400 (17%), Positives = 130/400 (32%), Gaps = 44/400 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ P+ R A + DL + T K P+ E
Sbjct: 41 FDDLKRAGLPT---RRVEAWHYTDLKTLLR-----------AIPDAATLTPSKAVAPLVE 86
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ ++ + D V V + E L A + V
Sbjct: 87 AARIFELRQGLSRDVSAPDGVKV-HAYSESLLDG--------TAAADL----------VA 127
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
D+ +N + DG + + V + + R + GS
Sbjct: 128 FSKDDTIGRINGSFVRDGYRLSVEDNVEVDRLIELQAYQGGGQS--HSRFVASFGSGSKA 185
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
+ +E + L ++V +L + AE+ + VQ D+ +
Sbjct: 186 TVIERHRNSG-ETAGLISSVSDLDLGEGAEVTWIIVQTQGLADTHLG--------QIKVV 236
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
G +K+ + G + + GE S ++ + G D + H N
Sbjct: 237 LGTNAKLKLFVINAGGKLVRQEIHVRTAGEGSDFTLRAVNLLGGESHTDVTMTLGHDVPN 296
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
TTS V + + + ++G++ V A + C++LL+ ++ P +E
Sbjct: 297 TTSTEVIRNVVFDRARGVFQGQIRVAPDAQKTDARMACNTLLMSDDAEYSVKPELEIFAD 356
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
H AT + I HL+Y + RGIP++ A L++ FV
Sbjct: 357 DVQCAHGATVADIDHNHLYYLMARGIPQKVARGLLIKAFV 396
>gi|162606194|ref|XP_001713612.1| hypothetical protein GTHECHR1114 [Guillardia theta]
gi|13794532|gb|AAK39907.1|AF165818_115 hypothetical protein [Guillardia theta]
Length = 467
Score = 177 bits (448), Expect = 5e-42, Method: Composition-based stats.
Identities = 78/431 (18%), Positives = 156/431 (36%), Gaps = 34/431 (7%)
Query: 66 LTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEIL 125
M +W +I I Y P D+ + K E +IL
Sbjct: 60 EDMHLSNWKKIGLKLIK-----NYTFPSKNDEVWRFTDLKKLYNLNFNKH---PSESDIL 111
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
+ +F++ +V F + L ++ +I I + +L V+ + +
Sbjct: 112 EFCDKINIENKIIFENGKLVY-FDKTLSENKMIE------IKKFTELNNDEKKKVLELSN 164
Query: 186 NFYAALNSAVF--------TDGSFVYIPKGVRCPMELSTYFR---INEKGTGQFERTLII 234
+ ++ F D + + ++ + G +R L++
Sbjct: 165 SGECGISGGFFSILNITSINDIYILKFNEDFTIETNINLISIGASNENQEIGFSKRLLVL 224
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
+ S V + T+ ++++ + + +N+ + + N G N
Sbjct: 225 LENKSEVKFNLINTSTKKEDIYFENSCINFYLKENSNLVLQNINN--------SVGSSNI 276
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ S ++ + G + G +S + + I++ + D ++
Sbjct: 277 MNTIHVDLNKGSFFTFNSISFGGDFERINIGVDMNGPESQCKLNGVFINHQNKIADIHSR 336
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H N S K I FS+ + GK+ + GA +S C +L++ +IP
Sbjct: 337 ISHNFPNCKSSQFQKNILNNFSHAIFAGKIQIQFGAENSEAEQLCRTLMLSPKSRIDSIP 396
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E N + H AT S I DE +FY + RGI ++ A +++ GF+ E L LP+
Sbjct: 397 ILEINNENVKCSHGATVSDIDDEQMFYLISRGIEKKIAQLILIKGFINESLIPLPLYLKN 456
Query: 475 EAQKLIDISLE 485
+K I LE
Sbjct: 457 SIEKKIFSLLE 467
>gi|83858477|ref|ZP_00951999.1| hypothetical protein OA2633_03221 [Oceanicaulis alexandrii
HTCC2633]
gi|83853300|gb|EAP91152.1| hypothetical protein OA2633_03221 [Oceanicaulis alexandrii
HTCC2633]
Length = 366
Score = 177 bits (448), Expect = 5e-42, Method: Composition-based stats.
Identities = 63/360 (17%), Positives = 124/360 (34%), Gaps = 30/360 (8%)
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G+ +V D +VV E +A E + + +
Sbjct: 32 GLPHRRVEEWKWTDLRTVVGKLPAEPGVLTFTISREPDAWAEQDEEPSLLMPRLA----- 86
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
SA+ D + G R + L ++ L++ EG +E
Sbjct: 87 ------SALGEDIQVYTLEDGERLELGLEA------SSGVSNQQVLVLVPEGVKAELVES 134
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
+ + + +V + AE+ Q+ P + V +
Sbjct: 135 YAV---EPDGFANLTLVIVVMPGAELDRVIEQHASPDAA--------LVVTSLIDLAPGA 183
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
K++ T L G+ + GE + + + + +D + + H N ++
Sbjct: 184 KLNQTTLGFGAKLARLETHVSHAGEGAELQLDGAYVLDEGLHLDQTSLVRHEGPNGVTKE 243
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
+ KG +A + ++GK+ V + A + Q LL+ + P +E
Sbjct: 244 LFKGAAARGAKGVFQGKIHVEQAAQKTDAQMQHRGLLLDDKAEIDAKPELEIYADDVVCA 303
Query: 427 HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEG 486
H + ++ LFY QRG+PE A AL+ F+ E ++++ E E +L+ + G
Sbjct: 304 HGNAFGALDEDALFYMRQRGLPESKARALLTQSFLAEPIERIRDEDDRE--RLLARLMVG 361
>gi|237785542|ref|YP_002906247.1| FeS assembly protein [Corynebacterium kroppenstedtii DSM 44385]
gi|237758454|gb|ACR17704.1| FeS assembly protein [Corynebacterium kroppenstedtii DSM 44385]
Length = 420
Score = 176 bits (447), Expect = 6e-42, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 102/315 (32%), Gaps = 22/315 (6%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
+ A A G+ + I +++ F T F ++A E
Sbjct: 107 RAAGAPVDRVGAQVFASLQRGTVLTIDDNTVVDGDITLTFTGTGSDTTSFGALAVVAGEH 166
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ + + + ++ A I + + +
Sbjct: 167 AEANVVLRFEGHGNYADFHSYSI-----GTGAHINVAIIDDMDDDAVHLAN--------E 213
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ + G ++ + + E + ++ Q + + H
Sbjct: 214 QLRLDRDAVMRHGYSAFGGSVVRNISHVAFKAPGADCELSGVYFADDGQYFEQRLLVDHS 273
Query: 359 AKNTTSRIVSKGISAG-------FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
N S ++ KG G + + G + A ++ + + +L++ A
Sbjct: 274 EANCRSNVMYKGALQGDPNSDLPETRTAWVGDALIRAQADNTDTYEKNMNLVLSEGARAD 333
Query: 412 TIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+P +E H AT + DE L+Y + RGIPE A LIV+GF EV+ ++P+
Sbjct: 334 AVPNLEIATGEIIGAGHAATVGRFDDEQLYYLMSRGIPEPVARRLIVHGFFTEVISRIPI 393
Query: 471 EFA-VEAQKLIDISL 484
E +K + L
Sbjct: 394 PAVQDELEKRVSEEL 408
>gi|331697200|ref|YP_004333439.1| FeS assembly protein SufD [Pseudonocardia dioxanivorans CB1190]
gi|326951889|gb|AEA25586.1| FeS assembly protein SufD [Pseudonocardia dioxanivorans CB1190]
Length = 397
Score = 176 bits (447), Expect = 6e-42, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 26/309 (8%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
D A SA P ++ G + + +
Sbjct: 101 PADRVAAQAWSAFREATVVTLDGT----PEPVTITLNGPGAGATAVAHLQVRTTPHTEAT 156
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
+ + +E V D +++ + W G +
Sbjct: 157 VVVEGRGSGALADN-----IEFVVADGSKLVVIVTEEWADDAVHVSG--------QHIAL 203
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G + I T + G + P+ E + + ++ Q ++ + H +
Sbjct: 204 GRDATIVATSIAFGGDLVRVSPTVTYTAPGGSAELFGLGFADAGQHLEQRLLVDHSTPHC 263
Query: 363 TSRIVSKGISAGF-----SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+S ++ K G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 264 SSNVLYKNALQGKEGVTDAHTVWIGDVLIRAAAEQTETFEFNRNLVLTAHARADSVPNLE 323
Query: 418 SKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ H + T + DE LFY RGIPE+ A L+V GF E+L ++P+ E
Sbjct: 324 IETGEIAGAGHASATGRFDDEQLFYLQSRGIPEDVARRLVVRGFFGEILSRIPL---AEL 380
Query: 477 QKLIDISLE 485
++ ++ ++E
Sbjct: 381 RERLEAAVE 389
>gi|322688971|ref|YP_004208705.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
157F]
gi|320460307|dbj|BAJ70927.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis 157F]
Length = 411
Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 19/306 (6%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L + TV D A + T + + + F
Sbjct: 98 LGEGLSGTVSKPNDRVSAVEWESGCTATI---LELSGEIAQPVLVKVHGAGEDLDAF-HL 153
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+I A + ++ + R VE+ ++ + + VQ W
Sbjct: 154 VIAAADKAHADVVVEHDGDARLAEG-----VEITTGKDSHVSTTFVQEWAKTAKH----- 203
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V G + + + + G I GEQ I + + I+
Sbjct: 204 ---VANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEH 260
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T ++H + SR+V KG G ++T+ G + A + ++ +L++ A
Sbjct: 261 RTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIA 320
Query: 411 HTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ P +E +N + H ++ + DE LFY RGIPE A L+V GF E+++++
Sbjct: 321 DSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIG 380
Query: 470 MEFAVE 475
+ E
Sbjct: 381 IPAISE 386
>gi|313622544|gb|EFR92956.1| FeS assembly protein SufD [Listeria innocua FSL J1-023]
Length = 158
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
G+ S + ++ + G Q + T++ H K + I+S G+ + + G +
Sbjct: 1 MGDGSSADVKTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIKH 60
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
GA+ S + L++ P + + H A+ ++ LFY + RGI
Sbjct: 61 GASKSDAQQESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSRGIS 120
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ A L+++GF+ V+++LP+E + ++ +EG V
Sbjct: 121 QKEAERLVIHGFLDPVVRQLPIES---VKTMLREVIEGKV 157
>gi|262277358|ref|ZP_06055151.1| FeS assembly protein SufD [alpha proteobacterium HIMB114]
gi|262224461|gb|EEY74920.1| FeS assembly protein SufD [alpha proteobacterium HIMB114]
Length = 413
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 73/426 (17%), Positives = 134/426 (31%), Gaps = 50/426 (11%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R+ A+ R+ PS ++ + L + L ++ L
Sbjct: 28 RIDAFERFCQKGVPS---LKQEHWKYSPLS-------------------KDLIHFQNLKF 65
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
+ + + K V L K GV+ + E ++ K
Sbjct: 66 SLNQNKSFNDTHFEKFDHYRV-------------LLKDGVLI--SDDIKEEGLEITKYKQ 110
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK--GTGQFERTLIIA 235
+ N N+A FT G + + V + Y ++ G + I
Sbjct: 111 DQFYEIEKNQILDFNNAFFTPGFEIRVDSNVNIKKPIVIYNYFSKDFDGNNINNKNYIYL 170
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
D+ S E + + + D +KY Y + IYNF+
Sbjct: 171 DKNSKAEIYEKNIFEDEKDLFFTKNLDIELEQDANLVKY------YLNSTNNNKTIYNFI 224
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ S+ + L G + +I + + ++
Sbjct: 225 RSKLK---QNSEFEKFNFSHNVSSCRDEIIADLNGTNAFVSLNNIQHLSQKCFHEIKWEI 281
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
H +NT S K S ++GK+ V A + + +LL+ + + P
Sbjct: 282 NHNEENTRSSQFVKSALHDDSVAAFQGKIFVDSKAQKTDGYQLSRALLLSDRSKFLSKPE 341
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H +++ I E +FY RGI E A +++ GF+ EV+ K+ E
Sbjct: 342 LEIYADDVKCSHGSSSGSIDQESIFYLRSRGINEPQAKCMMIEGFLAEVINKVKNEDVRN 401
Query: 476 A--QKL 479
KL
Sbjct: 402 IFYNKL 407
>gi|124022015|ref|YP_001016322.1| ABC transporter [Prochlorococcus marinus str. MIT 9303]
gi|123962301|gb|ABM77057.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9303]
Length = 416
Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 7/208 (3%)
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVT-------KRGDCRGMRSKISWTQLETGSAITW 321
A + V+ +++ G+ F + S +S + G +
Sbjct: 193 GANLTSVLVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQGWGVIR 252
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
P + + + ++ + Q D+ + + T + K ++AG + +
Sbjct: 253 HEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFN 312
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G V V R A + SLL+ + T P +E H AT S++ E LFY
Sbjct: 313 GVVQVPREAQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFY 372
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLP 469
RGI + A L++ F EV+ LP
Sbjct: 373 LQSRGISPDQAAQLLLRAFCDEVICMLP 400
>gi|225351937|ref|ZP_03742960.1| hypothetical protein BIFPSEUDO_03541 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157184|gb|EEG70523.1| hypothetical protein BIFPSEUDO_03541 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 407
Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/314 (18%), Positives = 111/314 (35%), Gaps = 20/314 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
V D A ++ G + + F +I
Sbjct: 96 DADTGIVSKPCDRVSAVEWNSASRAGI---LRIDGEISQPILVKIHGAGTDLDAF-HLVI 151
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA + ++ + R VE++ ++ + + +Q W G +
Sbjct: 152 IAADRAHADVVVEHDGDARIAEG-----VEILTGRDSHVSTTFIQEWNKGSKHVGNQRIH 206
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G + + + + G + G+Q I + + I+ T
Sbjct: 207 L--------GEGASLRHSVVTLGGDVVRIRMDQDFGGDQGDLNMLGIYFVDPGEHIEHRT 258
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
++H SR+V KG G ++T+ G + A + ++ +L++ A +
Sbjct: 259 MIVHNHPECKSRVVYKGALDGKGAHSTWVGNALIAPTAPGTDSYELNRNLVLTPGAIADS 318
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E +N + H ++ + DE LFY RGIPE A L+V GF E+++++ +
Sbjct: 319 EPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPETEARKLVVRGFFGELVEEIGIP 378
Query: 472 FAVE-AQKLIDISL 484
E +ID L
Sbjct: 379 AISEHLMNVIDKRL 392
>gi|218753178|ref|ZP_03531974.1| hypothetical protein MtubG1_06954 [Mycobacterium tuberculosis GM
1503]
Length = 271
Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 93/272 (34%), Gaps = 22/272 (8%)
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
+G + + +E + + VE V D A + + +W
Sbjct: 2 EGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADN-----VEFVVDDAARLTAVWIADWAD 56
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
G + + + G + G E +
Sbjct: 57 DTVHLS--------AHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYF 108
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-------SNNTYRGKVSVHRGAAHSRN 395
++ Q ++S + H + S ++ KG G ++ + G V + A +
Sbjct: 109 ADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDT 168
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
F +L++ + A ++P +E + H + T + DE LFY RGIPE A
Sbjct: 169 FEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARR 228
Query: 455 LIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
L+V GF E++ K+ + E I+ LE
Sbjct: 229 LVVRGFFGEIIAKIAVPEVRERLTAAIEHELE 260
>gi|213692464|ref|YP_002323050.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213523925|gb|ACJ52672.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320458609|dbj|BAJ69230.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. infantis ATCC 15697]
Length = 411
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 19/306 (6%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L + TV D A + T + + + F
Sbjct: 98 LGEGLSGTVSKPNDRVSAVEWESGHTATI---LELSGEIAQPVLVKVHGAGEDLDAF-HL 153
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+I A + ++ + R VE+ ++ + + VQ W
Sbjct: 154 VIAAADKAHADVVVEHNGDARLAEG-----VEITTGKDSHVSTTFVQEWAKTAKH----- 203
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V G + + + + G I GEQ I + + I+
Sbjct: 204 ---VANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEH 260
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T ++H + SR+V KG G ++T+ G + A + ++ +L++ A
Sbjct: 261 RTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIA 320
Query: 411 HTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ P +E +N + H ++ + DE LFY RGIPE A L+V GF E+++++
Sbjct: 321 DSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIG 380
Query: 470 MEFAVE 475
+ E
Sbjct: 381 IPAISE 386
>gi|260436196|ref|ZP_05790166.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
gi|260414070|gb|EEX07366.1| iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. WH 8109]
Length = 392
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 8/212 (3%)
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H+ V+E+ A++++ + G + + + RS ++T + G
Sbjct: 171 HSHVLEVHLGQEAQLRHGLLAT--------ADGASSLMAHFAVEQEPRSSYAFTSVVQGW 222
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ P + Q+ +A++ QQ+ + T + + K ++ G S+
Sbjct: 223 NLGRVEPRVVQVDGQAETVLKGLAVTGAEQQLATHTAVRFDGPEGELDQLQKCLAGGQSH 282
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ G +SV R A + +LL+ + T P +E H AT S++ +
Sbjct: 283 AIFNGAISVPRDAQRTNAAQLSRNLLLSDRARVDTKPELEIVADDVRCAHGATVSQLQAD 342
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
LFY RGI E A AL++ G +EV+ +LP
Sbjct: 343 ELFYLQSRGIAAEDATALLLRGACQEVIAQLP 374
>gi|126180164|ref|YP_001048129.1| SufBD protein [Methanoculleus marisnigri JR1]
gi|125862958|gb|ABN58147.1| SufBD protein [Methanoculleus marisnigri JR1]
Length = 370
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 91/375 (24%), Positives = 154/375 (41%), Gaps = 21/375 (5%)
Query: 111 TYEKLGIPIREQEILAGVQTSKV---AVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
E+L RE+ L G++ D + TT E G+ +PI A+
Sbjct: 7 DIEQLSQEDRERLALTGLEVGMQNRCGSFFQIDQDVIQTTCGAE----GIEMIPIKAAL- 61
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFT-DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
E D VK Y V + Y + G V +GV+ M L + ++
Sbjct: 62 EKYDWVKDYYWNAVSRDKDKYTQYLAKQENPQGLVVIAHEGVKVEMPLQACLFLRDEP-V 120
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
Q L IA EGS ++ + GC + + E+ H V E+ A++ + + NW G
Sbjct: 121 QHVHNLFIAREGSEINIISGCASSWQKEHGAHIGVTEIYVGKGAKVTSTMIHNWKEG--- 177
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
I F + +S YP+ L G+ + F SI ++
Sbjct: 178 ----ISVFPRSATVVEEDGTFLSNYVCMQPVNRVDMYPTARLVGKNAVARFSSIVVATPG 233
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
+D G++ + A+NT++ ++++ I+ G + + RG + ++R +C L++
Sbjct: 234 STLDLGSRAILGAENTSAELITRAITTGGTIIS-RG--HILGEKDNTRGHIECKGLIL-K 289
Query: 407 NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+ H IP IE + L HEA KI+ + Y + RG+ EE A A I+ GF+ +
Sbjct: 290 DGIVHAIPEIEGTLTGTELSHEAAVGKIARHEIEYLMARGLSEEEATATIIRGFLDVKIS 349
Query: 467 KLPMEFAVEAQKLID 481
LP + ID
Sbjct: 350 GLPAVLQEQIDAAID 364
>gi|296454032|ref|YP_003661175.1| FeS assembly protein SufD [Bifidobacterium longum subsp. longum
JDM301]
gi|296183463|gb|ADH00345.1| FeS assembly protein SufD [Bifidobacterium longum subsp. longum
JDM301]
Length = 411
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 19/306 (6%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L + TV D A + T + + + F
Sbjct: 98 LGEGLSGTVSKPNDRVSAVEWESGHTATI---LELSGEIAQPVLVKVHGAGEDLDAF-HL 153
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+I A + ++ + R VE+ ++ + + VQ W
Sbjct: 154 VIAAADKAHADVVVEHDGDARLAEG-----VEITTGKDSHVSTTFVQEWAKTAKH----- 203
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V G + + + + G I GEQ I + + I+
Sbjct: 204 ---VANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEH 260
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T ++H + SR+V KG G ++T+ G + A + ++ +L++ A
Sbjct: 261 RTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIA 320
Query: 411 HTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ P +E +N + H ++ + DE LFY RGIPE A L+V GF E+++++
Sbjct: 321 DSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIG 380
Query: 470 MEFAVE 475
+ E
Sbjct: 381 IPAISE 386
>gi|302383288|ref|YP_003819111.1| SufBD protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193916|gb|ADL01488.1| SufBD protein [Brevundimonas subvibrioides ATCC 15264]
Length = 337
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 96/282 (34%), Gaps = 10/282 (3%)
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
A + L F + GTG I G+ ++ LE
Sbjct: 56 AFANGRAVGADAFVASGEQTLRLRFVSDATGTGHSAAVRIAVRPGARLTLLESHEGSG-- 113
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+ +EL AE+ + + V + T +
Sbjct: 114 SAYVANTRIELDIPAGAEVTRVVLIDEPADAIS--------VAVTSVKTAAGAVYRQTTV 165
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G+ + + GE + + +G + D + + H N + ++KG+
Sbjct: 166 THGARLQRQETHLAHGGEGTEIVLDGLYALSGERHSDLTSVVRHNGLNGVTSQLTKGVVR 225
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+ ++GK+ V RGA + +L++G P +E H T
Sbjct: 226 DTARGVFQGKIVVERGADGTDARMGHHALILGERAEVDAKPELEIYADDVQCAHGNTVGN 285
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ + LFY QRGIP + A AL+ F+ EV+ ++ E A E
Sbjct: 286 LDESALFYMEQRGIPADEARALLTQAFLFEVVDRIADEGARE 327
>gi|23465445|ref|NP_696048.1| ABC transporter [Bifidobacterium longum NCC2705]
gi|46191166|ref|ZP_00206695.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Bifidobacterium longum
DJO10A]
gi|189439468|ref|YP_001954549.1| Fe-S cluster assembly ABC transporter permease [Bifidobacterium
longum DJO10A]
gi|227545921|ref|ZP_03975970.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622031|ref|ZP_04665062.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312132876|ref|YP_004000215.1| sufb1 [Bifidobacterium longum subsp. longum BBMN68]
gi|317482204|ref|ZP_07941226.1| FeS assembly protein SufD [Bifidobacterium sp. 12_1_47BFAA]
gi|322690940|ref|YP_004220510.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
1217]
gi|23326096|gb|AAN24684.1| possible ABC transporter component [Bifidobacterium longum NCC2705]
gi|189427903|gb|ACD98051.1| ABC-type transport system for Fe-S cluster assembly permease
component [Bifidobacterium longum DJO10A]
gi|227213555|gb|EEI81404.1| FeS assembly protein SufD [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239515222|gb|EEQ55089.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|291516995|emb|CBK70611.1| Iron-regulated ABC transporter permease protein SufD
[Bifidobacterium longum subsp. longum F8]
gi|311773846|gb|ADQ03334.1| SufB1 [Bifidobacterium longum subsp. longum BBMN68]
gi|316916342|gb|EFV37742.1| FeS assembly protein SufD [Bifidobacterium sp. 12_1_47BFAA]
gi|320455796|dbj|BAJ66418.1| putative ABC transporter permease component [Bifidobacterium longum
subsp. longum JCM 1217]
Length = 411
Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 19/306 (6%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L + TV D A + T + + + F
Sbjct: 98 LGEGLSGTVSKPNDRVSAVEWESGRTATI---LELSGEIAQPVLVKVHGAGEDLDAF-HL 153
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+I A + ++ + R VE+ ++ + + VQ W
Sbjct: 154 VIAAADKAHADVVVEHDGDARLAEG-----VEITTGKDSHVSTTFVQEWAKTAKH----- 203
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V G + + + + G I GEQ I + + I+
Sbjct: 204 ---VANHRIHVGEGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEH 260
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T ++H + SR+V KG G ++T+ G + A + ++ +L++ A
Sbjct: 261 RTMVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIA 320
Query: 411 HTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ P +E +N + H ++ + DE LFY RGIPE A L+V GF E+++++
Sbjct: 321 DSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIG 380
Query: 470 MEFAVE 475
+ E
Sbjct: 381 IPAISE 386
>gi|255023193|ref|ZP_05295179.1| FeS assembly protein SufB [Listeria monocytogenes FSL J1-208]
Length = 119
Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats.
Identities = 55/119 (46%), Positives = 77/119 (64%)
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+S N TYRG V R A +R+ +CD+L++ N + TIPY E NS+ +LEHEA
Sbjct: 1 MSKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNEILNSNISLEHEAK 60
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
SK+S+E LFY + RG+ EE A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 61 VSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 119
>gi|291456680|ref|ZP_06596070.1| FeS assembly protein SufD [Bifidobacterium breve DSM 20213]
gi|291381957|gb|EFE89475.1| FeS assembly protein SufD [Bifidobacterium breve DSM 20213]
Length = 411
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 106/304 (34%), Gaps = 19/304 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ TV D A + T + + F +I
Sbjct: 100 EGLSGTVSKPNDRVSAVEWESGATATILELTGE---ITQPVLVKVHGAGADLDAF-HLVI 155
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A + ++ + R VE+ ++ + + +Q W
Sbjct: 156 AAADKAHADVVVEHDGDARLAEG-----VEITTGKDSHVSTTFIQEWAKTAKH------- 203
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V G + + + + G I GEQ I + + I+ T
Sbjct: 204 -VGNHRIHVGKGASLRHSVVTLGGDIVRIRMDQDFGGEQGDLNMLGIYFVDPGEHIEHRT 262
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
++H + SR+V KG G ++T+ G + A + ++ +L++ A +
Sbjct: 263 MVVHNHPDCKSRVVYKGALDGKGAHSTWVGNALIQPTAPGTDSYELNRNLVLTPGAIADS 322
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E +N + H ++ + DE LFY RGIPE A L+V GF E+++++ +
Sbjct: 323 EPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGIPETDARKLVVRGFFGELVEEIGIP 382
Query: 472 FAVE 475
E
Sbjct: 383 AISE 386
>gi|262037696|ref|ZP_06011139.1| FeS assembly protein SufD [Leptotrichia goodfellowii F0264]
gi|261748308|gb|EEY35704.1| FeS assembly protein SufD [Leptotrichia goodfellowii F0264]
Length = 375
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 57/304 (18%), Positives = 115/304 (37%), Gaps = 12/304 (3%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D F+ A G FV + + + + + N++ + +I ++ + +
Sbjct: 84 DEFFKLQIFAFHNAGQFVKVKERKKLEKPVYITYNTNKENNFLIDCNIIEVEDFAEAVII 143
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ D H + ++ A N+++K +Q S +
Sbjct: 144 I-TYNSEDDTPAYHNGITKIFAGQNSKVKIIKIQTLNTESSNFESS--------KIETAG 194
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ +++ +E G+ I L +++ + +++G +Q+D + + T
Sbjct: 195 QGIVNYYSIELGAKINGISHKTYLMEDRAETYVWPGYLADGTRQLDLEYSTVFYGRQTIG 254
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I +G + +RG + RGAA S ++L+ + H IP +
Sbjct: 255 EIHGRGAVKDTARKVFRGNMYFKRGAAKSEGREGEFAILLDKDVKVHAIPTLFCDEDDVI 314
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
EH A+ K+ D LFY + RG+ E A LIV R + + E E L++ L
Sbjct: 315 GEHYASIGKVDDAKLFYLMSRGLSEGRAKKLIVESSFRPIFDNIDDENIRE--HLLE-EL 371
Query: 485 EGSV 488
E +
Sbjct: 372 ERRI 375
>gi|257125282|ref|YP_003163396.1| SufBD protein [Leptotrichia buccalis C-1013-b]
gi|257049221|gb|ACV38405.1| SufBD protein [Leptotrichia buccalis C-1013-b]
Length = 375
Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats.
Identities = 66/380 (17%), Positives = 150/380 (39%), Gaps = 21/380 (5%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
L+ +E+ + G + + F+++ V ++ GV+ I++++ E
Sbjct: 17 LKIFEEYKTLEKVNWKRVGYKYEEPETFKEFNNLEVKNENQD-----GVVIKNINDSLQE 71
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
L + +F+ N A + +G ++ I + + +R N++
Sbjct: 72 LESLKNDNDYGL----GDFFKKQNFAFYNEGKYLKIKERKTVEKPIYLNYRANKENNFLV 127
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+ +I ++ + V+ + + D H ++++ NAE+K +Q
Sbjct: 128 DYNVIEVEDFAKVTVII-TYDSEDDTPVYHNGIIKVFTGRNAEVKIIKIQTL-------N 179
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
NF + + + G + K + +E G I L + + + +++ ++
Sbjct: 180 TNSSNFESSKIETLG-QGKTQYYSVELGGKINAISHKSYLEEDSAEVYVWPAYLADEDRK 238
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D ++ + T + +G + +RG + +G++ S ++L+ +
Sbjct: 239 LDLEYSVVFRGRRTIGELQGRGAVKDTAKKVFRGNLYFKQGSSKSEGREGEFAILLNDKI 298
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A +IP + EH A+ K+ + LFY + RG+ E A LIV R ++ +
Sbjct: 299 KADSIPTLFCSEDDVIGEHAASVGKVDESKLFYLMSRGLSEGRAKKLIVESSFRPIMDNI 358
Query: 469 PMEFAVEAQKLIDISLEGSV 488
E E KL + LE +
Sbjct: 359 DDEKLRE--KLFE-ELERRI 375
>gi|289761620|ref|ZP_06520998.1| FeS assembly protein [Mycobacterium tuberculosis GM 1503]
gi|289709126|gb|EFD73142.1| FeS assembly protein [Mycobacterium tuberculosis GM 1503]
Length = 267
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 88/250 (35%), Gaps = 17/250 (6%)
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E +A VE V D A + + +W G
Sbjct: 15 EAVVVIDHRGGGTYADNVEFVVDDAARLTAVWIADWADDTVHLS--------AHHARIGK 66
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ + + G + G E + ++ Q ++S + H + S
Sbjct: 67 DAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQHLESRLLVDHAHPDCKS 126
Query: 365 RIVSKGISAGF-------SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
++ KG G ++ + G V + A + F +L++ + A ++P +E
Sbjct: 127 NVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLE 186
Query: 418 SKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE- 475
+ H + T + DE LFY RGIPE A L+V GF E++ K+ + E
Sbjct: 187 IETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRER 246
Query: 476 AQKLIDISLE 485
I+ LE
Sbjct: 247 LTAAIEHELE 256
>gi|167646554|ref|YP_001684217.1| SufBD protein [Caulobacter sp. K31]
gi|167348984|gb|ABZ71719.1| SufBD protein [Caulobacter sp. K31]
Length = 343
Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 92/259 (35%), Gaps = 10/259 (3%)
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F GT II + + + LE R +++ + A ++ +
Sbjct: 82 FVSASDGTAHAAAYAIIVEPDTTLVLLESHE--GRAGGYFSDVTLDIAVGEGAHVERIVL 139
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+ + V + + T L TG+ G +
Sbjct: 140 VDDHAEAID--------VVTAEVDLAPGATFNQTVLTTGARRQRIETRINHPGAHAKVRL 191
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
+ I + D T + H + +R ++KG+ + ++G++ V GA +
Sbjct: 192 DGVYILEDQRHADQTTVVTHSGVDGITRQLTKGVVDDQARGVFQGRIVVQPGADQTDARM 251
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+L++ + P + H T + DE +FY QRGIPE A A++
Sbjct: 252 GHHALILSDKAEVDAKPELLIFADDVACAHGNTIGALDDEQIFYARQRGIPEVEARAMLT 311
Query: 458 NGFVREVLQKLPMEFAVEA 476
F+ EV++++ + A E
Sbjct: 312 QAFLGEVVERIEHDGAREI 330
>gi|308235894|ref|ZP_07666631.1| FeS assembly protein SufD [Gardnerella vaginalis ATCC 14018]
gi|311115010|ref|YP_003986231.1| FeS assembly protein SufD [Gardnerella vaginalis ATCC 14019]
gi|310946504|gb|ADP39208.1| FeS assembly protein SufD [Gardnerella vaginalis ATCC 14019]
Length = 431
Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats.
Identities = 65/377 (17%), Positives = 133/377 (35%), Gaps = 25/377 (6%)
Query: 98 PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGV 157
P ++ + +R++ I ++ T + FDS ELK
Sbjct: 32 PAAMPSSADKSVRSFNVQDFTIPTRKQEDWRYTPVERISEFFDSFKPSNNVAVELKGVDG 91
Query: 158 IFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST- 216
+ + + + T + D A ++ +++ V P+ L
Sbjct: 92 DSHVTMQILPK-----NEAPHTEMKPSDRVAAVAWNS-AKSAYVLHVCGEVTKPIILQIH 145
Query: 217 ---YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
++ + +I AD + + T + VE++ DNA +
Sbjct: 146 GNNLQSLDAAKSLDALHLVIEADSYTNADIIVEHTGVAKLAEG-----VEIILGDNAHVS 200
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+ +Q W G V G + + T + G + GE+
Sbjct: 201 TTFIQEWDSGSKH--------VGNHRIHVGQGASLRHTMVTLGGDVVRIRMDQDFGGEKG 252
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAH 392
+ + + ++ T ++H SR+V KG G ++T+ G + A
Sbjct: 253 DLNMLGMYFVDPGEHVEHRTMVVHNHPECKSRVVYKGALYGKGAHSTWVGNALIKPEAPG 312
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEA 451
+ ++ +L++ A + P +E +N + H ++ + DE LFY RG+ E
Sbjct: 313 TDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGVSEAD 372
Query: 452 AIALIVNGFVREVLQKL 468
A L+V GF E++ ++
Sbjct: 373 ARKLVVRGFFNELIDEI 389
>gi|154487449|ref|ZP_02028856.1| hypothetical protein BIFADO_01302 [Bifidobacterium adolescentis
L2-32]
gi|154083967|gb|EDN83012.1| hypothetical protein BIFADO_01302 [Bifidobacterium adolescentis
L2-32]
Length = 407
Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats.
Identities = 59/314 (18%), Positives = 108/314 (34%), Gaps = 20/314 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
V D A ++ G + K F I
Sbjct: 96 DTGTGIVSKPNDRVSAVEWNSGKRAGILT---IDGEIDQPVLVKMHGTGKDLDAF-HLSI 151
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA + ++ + R VE+ ++ I + +Q W
Sbjct: 152 IAADRAHADVVVEHDGDARLAEG-----VEITTGKDSHISTTFIQEWNKDSKH------- 199
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V + G + + + + G + GEQ I + + I+ T
Sbjct: 200 -VGNQRIHVGEEASLRHSVVTLGGDVVRIRMDQDFGGEQGDLNMLGIYFVDPDEHIEHRT 258
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
++H SR+V KG G ++T+ G + A + ++ +L++ A +
Sbjct: 259 MVVHNHPECKSRVVYKGALDGKGAHSTWVGNALIEPTAPGTDSYELNRNLVLTPGAIADS 318
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E +N + H ++ + DE LFY RGI E A L+V GF E+++++ +
Sbjct: 319 EPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGISENEARKLVVRGFFGELVEEIGIP 378
Query: 472 FAVE-AQKLIDISL 484
E +ID L
Sbjct: 379 AISEHLMNVIDKRL 392
>gi|320100897|ref|YP_004176489.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
gi|319753249|gb|ADV65007.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
Length = 407
Score = 173 bits (439), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/411 (21%), Positives = 159/411 (38%), Gaps = 24/411 (5%)
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
P +D D Y A P S+ + E E+ G+ + A
Sbjct: 21 PDVDLDA--YTAEPVSVGEVSGESGIPAEARGAGERFGMNVE------------AASYIQ 66
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
D ++ + L K GV MP A+ + V P D + A+
Sbjct: 67 LDETALYRLMERVLGKYGVKIMPTRLALEKTDVGRSLAWRLVDPATDKYTASTYLRGGEL 126
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
G F+Y+P+GVR P+ + T I Q+ ++ DEG+ + GC P +H
Sbjct: 127 GYFIYVPRGVRVPVPIYTCLAITGDRRIQYAHNIVFVDEGAEAHVVTGCAVPHGVREGVH 186
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
V E NA + ++ + W G ++ +S+ + + A
Sbjct: 187 IGVSEFYVSRNARLTFTMMHAWADG-------MHVRPRTAVRVEEGAEYVSYYIIYSPVA 239
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
YP L SI +G D G+ + K +++ +VS+ +++ +
Sbjct: 240 SLQTYPRTELSA-GGKAYLASIVAGSGRGIYDQGSAAVLAGKGSSAEVVSRVVASDHAEV 298
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
R S+ A +R +C LL+ +IP I S+ L HEA I+++
Sbjct: 299 YAR--SSIDAYDAETRGHIECLGLLLSGKAMVSSIPVITSRKPGALLSHEAAIGMIAEKE 356
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ Y + +G E+ A +++V GF+ + +P+ E +KL+D +VG
Sbjct: 357 IQYLMSKGFTEDEAKSVLVRGFMSIEVPGIPLAVKREVEKLLDRITRNAVG 407
>gi|260891436|ref|ZP_05902699.1| FeS assembly protein SufD [Leptotrichia hofstadii F0254]
gi|260858819|gb|EEX73319.1| FeS assembly protein SufD [Leptotrichia hofstadii F0254]
Length = 375
Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats.
Identities = 68/380 (17%), Positives = 151/380 (39%), Gaps = 21/380 (5%)
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
L+ +E+ + G + + F+++ V ++ GV+ I++++ E
Sbjct: 17 LKIFEEYKTLEKVNWKRVGYKYEEPETFKEFNNLEVKNENQD-----GVVIKNINDSLQE 71
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
L + +F+ N A + +G ++ I + + +R N++
Sbjct: 72 LESLKNDNDYGL----GDFFKKQNFAFYNEGKYLKIKERKTVEKPIYLNYRANKENNFLV 127
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+ +I ++ + V+ + + D H ++++ NAE+K +Q S
Sbjct: 128 DCNVIEVEDFAKVTVII-TYDSEDDTPVYHNGIIKVFTGRNAEVKIIKIQTLNTKSS--- 183
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
NF + + + G + K + +E G I L + S + +++ ++
Sbjct: 184 ----NFESSKIETLG-QGKTQYYSVELGGKINAISHKSYLEEDSSEVYVWPAYLADEDRK 238
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D ++ + T + +G + +RG + +G++ S ++L+ +
Sbjct: 239 LDLEYSVVFRGRRTIGELQGRGAVKDEAKKVFRGNLYFKQGSSKSEGREGEFAILLNDKI 298
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
A +IP + EH A+ K+ + LFY + RG+ E A LIV R ++ +
Sbjct: 299 KADSIPTLFCSEDDVIGEHAASVGKVDESKLFYLMSRGLSEGRAKKLIVESSFRPIMDNI 358
Query: 469 PMEFAVEAQKLIDISLEGSV 488
E E KL + LE +
Sbjct: 359 DDEKLRE--KLFE-ELERRI 375
>gi|119025729|ref|YP_909574.1| ABC transporter [Bifidobacterium adolescentis ATCC 15703]
gi|118765313|dbj|BAF39492.1| possible ABC transporter component [Bifidobacterium adolescentis
ATCC 15703]
Length = 410
Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats.
Identities = 59/314 (18%), Positives = 108/314 (34%), Gaps = 20/314 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
V D A ++ G + K F I
Sbjct: 99 DTGTGIVSKPNDRVSAVEWNSGKRAGILT---IDGEIDQPVLVKMHGTGKDLDAF-HLSI 154
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
IA + ++ + R VE+ ++ I + +Q W
Sbjct: 155 IAADRAHADVVVEHDGDARLAEG-----VEITTGKDSHISTTFIQEWNKDSKH------- 202
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V + G + + + + G + GEQ I + + I+ T
Sbjct: 203 -VGNQRIHVGEEASLRHSVVTLGGDVVRIRMDQDFGGEQGDLNMLGIYFVDPDEHIEHRT 261
Query: 354 KMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
++H SR+V KG G ++T+ G + A + ++ +L++ A +
Sbjct: 262 MVVHNHPECKSRVVYKGALDGKGAHSTWVGNALIEPTAPGTDSYELNRNLVLTPGAIADS 321
Query: 413 IPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P +E +N + H ++ + DE LFY RGI E A L+V GF E+++++ +
Sbjct: 322 EPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGISENEARKLVVRGFFGELVEEIGIP 381
Query: 472 FAVE-AQKLIDISL 484
E +ID L
Sbjct: 382 AISEHLMNVIDKRL 395
>gi|323227193|gb|EGA11366.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
Length = 227
Score = 173 bits (438), Expect = 7e-41, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 23/208 (11%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNS 193
I +HPDLV+KYL TVVP DNF+
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFVRAEC 200
>gi|150016723|ref|YP_001308977.1| FeS assembly protein SufD [Clostridium beijerinckii NCIMB 8052]
gi|149903188|gb|ABR34021.1| FeS assembly protein SufD [Clostridium beijerinckii NCIMB 8052]
Length = 365
Score = 173 bits (438), Expect = 7e-41, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 107/293 (36%), Gaps = 14/293 (4%)
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F G + I + ++ + F ++ + + +I+ +E S S + D N
Sbjct: 82 FNQGYLITIGRNIKTDEPIIIEFNFDKDNSSLVDNLIIVGEENSKASIIVKYK-SLDDSN 140
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
H + + + N+EIK + V + K+ + ++
Sbjct: 141 GYHNGICTIYSKKNSEIKLTKVNFLNENTVHFDSNV--------SDIEEDGKVDFISVDL 192
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
G + L G++S SI + + + ID + H + + S I KG G
Sbjct: 193 GGQYSIYNYHGDLIGDKSAANINSIYLGSKDKLIDINYIVTHKGQRSNSNINVKGALQGK 252
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ ++G + GA+ S +++ A +P + + EH A++ +I
Sbjct: 253 ARKAFKGTLDFKTGASKSVGAEDEYCMILSKEARAKAMPVLLCAEDDVSGEHAASSGRID 312
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-----EFAVEAQKLIDIS 483
+ LFY + RG+ + A +IV ++ + E E + +
Sbjct: 313 ENKLFYLMSRGLSYDEAKIVIVRAAFNPIIDSIGDNDVIEEILQEVDRGLKNE 365
>gi|70937325|ref|XP_739485.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516519|emb|CAH86245.1| hypothetical protein PC404357.00.0 [Plasmodium chabaudi chabaudi]
Length = 238
Score = 172 bits (437), Expect = 8e-41, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 143/235 (60%), Gaps = 1/235 (0%)
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
E+QLH A+VE++ + +KY T+QNWY GD G GG+YNF TKRG C +K+ W
Sbjct: 1 MYKESQLHIAIVEIIVKNYGYVKYYTLQNWYRGDYLGNGGLYNFTTKRGICFY-FAKLDW 59
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
Q+E GS ITWKYPS +L+G S FYSI+ + Q D+G+K+ H+ T S I+SK
Sbjct: 60 IQIELGSIITWKYPSTILKGNYSISNFYSISFISDTQIADTGSKIYHIGSYTKSYIISKS 119
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
IS S N +RG V + + S N+T+C SL+ GNN TIPYI++ N++ ++ EA
Sbjct: 120 ISLNKSLNIFRGLVYIKPNSYRSYNYTECSSLIFGNNSLTITIPYIKNYNNTSVIKQEAF 179
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
SKI +LF +QRG+ +I+LI+ GF + KLP E +E L + ++
Sbjct: 180 ISKIEILYLFLLMQRGLSISDSISLIIIGFCSSIYNKLPFELNLEIPILFSLKVK 234
>gi|33863871|ref|NP_895431.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
gi|33635454|emb|CAE21779.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9313]
Length = 416
Score = 172 bits (437), Expect = 9e-41, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 7/208 (3%)
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVT-------KRGDCRGMRSKISWTQLETGSAITW 321
A + V+ +++ G+ F + S +S + G +
Sbjct: 193 GANLTSVLVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVSLVSVCQGWGVIR 252
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
P + + + ++ + Q D+ + + T + K ++AG + +
Sbjct: 253 HEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFN 312
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G V V R + SLL+ + T P +E H AT S++ E LFY
Sbjct: 313 GVVQVPREGQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFY 372
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLP 469
RGI + A L++ F EV+ LP
Sbjct: 373 LQSRGISPDQAAQLLLRAFCDEVICMLP 400
>gi|32491107|ref|NP_871361.1| hypothetical protein WGLp358 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166314|dbj|BAC24504.1| ynhC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 431
Score = 172 bits (437), Expect = 9e-41, Method: Composition-based stats.
Identities = 59/288 (20%), Positives = 108/288 (37%), Gaps = 14/288 (4%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR-----INEKGTGQFERTLIIADEGSY 240
+F+ + ++ + + +Y+ K + L EK R I S
Sbjct: 131 DFFLHCSESLSEEITHIYLKKEINEIKPLYLINIGKILENKEKIIFINNRNHIEIGNNSK 190
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
+E + L+ + + N+ + + + +Q YNF
Sbjct: 191 CQIIEHFINN-DNYKYLNNSRTTIHIKKNSFVDFIKI-------NQNNINSYNFSND-DF 241
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
S S + G I+ + + S S++I Q +D T + H K
Sbjct: 242 FLEKNSNFSNNVINLGGYISKQNINLRFNKPNSNVLINSLSIPIKNQIVDIKTFVEHKDK 301
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
N SR + K I + S + GK+ V + A + + +++L+G T P +E
Sbjct: 302 NCKSRQLHKFILSDRSKGIFHGKIKVEKNAVKTDGHMKNNNILLGEKSSIITKPQLEIYT 361
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H ATT+ + E+LFY RGI ++ A LI+ F E ++ +
Sbjct: 362 DDVKCSHGATTNYLDSEYLFYLRSRGISKKDAKILIICSFYLETIKNI 409
>gi|213029363|ref|ZP_03343810.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 197
Score = 172 bits (437), Expect = 9e-41, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 23/204 (11%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYA 189
I +HPDLV+KYL TVVP DNF+A
Sbjct: 173 IHDHPDLVRKYLGTVVPGNDNFFA 196
>gi|294790818|ref|ZP_06755976.1| FeS assembly protein SufD [Scardovia inopinata F0304]
gi|294458715|gb|EFG27068.1| FeS assembly protein SufD [Scardovia inopinata F0304]
Length = 427
Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/394 (14%), Positives = 135/394 (34%), Gaps = 20/394 (5%)
Query: 79 PAIDFDDLYYYAAPKSIVG--PQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVD 136
+ ++ + A + P ++ + R++ P+ ++ T ++
Sbjct: 13 SPVKNQEISFPQADPTDPYAIPAAMPSSADKEPRSFNPDDFPLPTRKQDDWRFTPLDRME 72
Query: 137 AVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVF 196
F + L +P A + TV+ D A +
Sbjct: 73 EFFSVFHPSGKTELSLTTVDGSPVPAGVADLRQTTTSDPQVGTVLLPSDRAAAVQWISSR 132
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ + L + F+ ++I A E G + +
Sbjct: 133 DHAYVLTLRGT--WTTPLVLKIQGKSLDMDAFQLSIIAAPES------RGDLVIEHQGDA 184
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
A +E+ N+ + +++Q W P + G + + + G
Sbjct: 185 RLAEGIEISTGANSHVCIASIQEWSPASKHVGNHRIHL--------GQGASLRHCVVTLG 236
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF- 375
+ + G + I + ++ T ++H + SR++ KG G
Sbjct: 237 ADVARIRIDQDFDGPEGDINMLGIYFVEPGEHMEHRTMVVHNQPDCKSRVIYKGALEGKQ 296
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKI 434
+++T+ G + A + ++ +L++ A + P +E +N + H ++ +
Sbjct: 297 AHSTWVGNALIQPTAPGTDSYELNRNLVLIPGAVADSEPNLEIENGNIVGAGHASSVGRF 356
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
DE LFY RG+PE A L+V GF ++++++
Sbjct: 357 DDEELFYLQSRGVPEAEARKLVVRGFFGQLIEEI 390
>gi|254520074|ref|ZP_05132130.1| FeS assembly protein SufD [Clostridium sp. 7_2_43FAA]
gi|226913823|gb|EEH99024.1| FeS assembly protein SufD [Clostridium sp. 7_2_43FAA]
Length = 368
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/281 (20%), Positives = 108/281 (38%), Gaps = 9/281 (3%)
Query: 196 FTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
F G + I K + + F ++ + + LI+A+E S + D
Sbjct: 85 FNKGYVINIAKNAKVQEPIIIEFNMDNENKTLVDNILIVAEEDSNAKVIIKY-NSLDDSE 143
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
H V ++ + +N+ I+ V + N + D G K+ + ++
Sbjct: 144 GYHNGVCKIFSKNNSNIQVVKV-------NLLNKNTMNLDSNLSDV-GYNGKVDFVSIDL 195
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
G + L + S SI + + ID M H + + S I +KG G
Sbjct: 196 GGKNSITNYHGDLLEDNSESTLSSIYLGGDKKVIDMNYVMTHKGRRSKSEITTKGALKGE 255
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+N +RG + RGA+ S +++ +P + + + EH A + KI
Sbjct: 256 ANKIFRGTLDFKRGASRSVGVEDEYCMILSPKVKGKALPLLLCEEDDVSGEHAAASGKID 315
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
+ LFY + RG+ A +I+ G ++ K+ E EA
Sbjct: 316 EAKLFYLMSRGLSYNDARRVIIEGAFNPIIDKIDNENIREA 356
>gi|330684924|gb|EGG96606.1| SufB/sufD domain protein [Staphylococcus epidermidis VCU121]
Length = 161
Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L G++S E S+ + G Q+I+ +K++ K T I+ G+ +++ + G +
Sbjct: 1 NLMGDRSTSELKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYI 60
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
G S + L++ N P + H A+ ++ E L+Y + RG
Sbjct: 61 KHGGTKSIANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRG 120
Query: 447 IPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDIS 483
I A L+++GF+ V+++LP+E + +++I++
Sbjct: 121 ISRREAERLVIHGFLDPVVRELPIEDVKRQLREVIELK 158
>gi|307352809|ref|YP_003893860.1| SufBD protein [Methanoplanus petrolearius DSM 11571]
gi|307156042|gb|ADN35422.1| SufBD protein [Methanoplanus petrolearius DSM 11571]
Length = 370
Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/383 (19%), Positives = 151/383 (39%), Gaps = 18/383 (4%)
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ +++ +++ L+G + F + G+ +PI A+
Sbjct: 1 MPEIIDEIPEEDKKRMELSGFEFDARKRSGSFIQRDQHIHLSSSKVE-GIEMLPIEIALK 59
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNS----AVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
++ D +K Y +V + Y + G V KG + L + +
Sbjct: 60 KY-DWLKDYYWNLVDRDKDEYTKFVAEKEEKEGPRGFVVLARKGSKNIFPLQSCLFMKSA 118
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
+IIA+EG+ + + GCT+ E H + E+ +A++ + + W
Sbjct: 119 EIQTV-HNIIIAEEGAELHLITGCTSSIGREKGTHYGITEIYVGKDAQVSNTMIHTWGE- 176
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
I F + +S YP L G+ S F S+ ++
Sbjct: 177 ------NINVFPRSATKVEENGTFLSNYISLKPVGKVQMYPVADLAGKNSVARFNSVVLA 230
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+D G + L + +++ ++S+ I++G + + + + +++ +C L+
Sbjct: 231 PKGSHLDLGQRALLTGEGSSAELISRVITSGG--VVF-ARSHIAGISDNTKGHIECKGLI 287
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ + H+IP +E + + L HEA KI+ + + Y + RG+ EE A A I+ GF+
Sbjct: 288 L-EDGVIHSIPEVEGRLKNTELTHEAAVGKIARDEIEYLMARGLDEEEATATIIRGFLDV 346
Query: 464 VLQKLPMEFAVEAQKLIDISLEG 486
++ LP E ID + G
Sbjct: 347 RIKGLPDSLQKEIDAAIDAAESG 369
>gi|309793449|ref|ZP_07687876.1| conserved domain protein [Escherichia coli MS 145-7]
gi|308123036|gb|EFO60298.1| conserved domain protein [Escherichia coli MS 145-7]
Length = 106
Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats.
Identities = 69/106 (65%), Positives = 87/106 (82%)
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ + A ++RNFTQCDS+LIG NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCL
Sbjct: 1 MKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCL 60
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
QRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 61 QRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 106
>gi|254419884|ref|ZP_05033608.1| sufB/sufD domain protein [Brevundimonas sp. BAL3]
gi|196186061|gb|EDX81037.1| sufB/sufD domain protein [Brevundimonas sp. BAL3]
Length = 340
Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/340 (17%), Positives = 109/340 (32%), Gaps = 18/340 (5%)
Query: 147 TFKEELKKSGVIFMPISEAI------CEHPDLVKKYLSTVVPVGDNFYAALNSA--VFTD 198
TF +L + EA + + V FYA A
Sbjct: 4 TFAIDLTDAATFPSRRDEAWKYSDLKRHLREAPTPSGTAAVGAPGPFYALGGEAIVFANG 63
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
L + N GTG R + G+ + LE +
Sbjct: 64 RPVGVTDFIASGEQTLRLRYISNAVGTGHTARARVAVRAGAKLLLLETHEGAGSAYVAHN 123
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+EL AE+ + + + T + TG+
Sbjct: 124 T--LELDVAAGAEVTRVVLVEEPEDAIS--------IAEAHVKVEAGGVYRQTIIATGAK 173
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+ + + + + + NG +Q D + + H+ ++ + + KG++ +
Sbjct: 174 LQRIETRIAHFAQGAQVQADGLYLLNGSRQADLTSVVRHMERDGATSQLIKGVARDTARG 233
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
++GK+ V RGA + +L+ P + H T + +
Sbjct: 234 VFQGKIVVERGADGTDARMGHHALIASERAEIDAKPELIIYADDVQCAHGNTVGALDESA 293
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
LFY QRGIP E A AL+ F+ EV+ ++ E A E +
Sbjct: 294 LFYMQQRGIPAEEARALLTQAFLIEVIDRIEHEGAREVAR 333
>gi|218883463|ref|YP_002427845.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
gi|218765079|gb|ACL10478.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
Length = 407
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 92/405 (22%), Positives = 167/405 (41%), Gaps = 28/405 (6%)
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
Y + D++ E + E+ GI + A+ D ++ +
Sbjct: 28 YTSDSAKTTEISGRDEIPVEARKAGERFGINVE------------SAMYIQVDESALYRS 75
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG---SFVYI 204
++ L K GV MP A+ E DL ++ ++ + Y SA G F+Y+
Sbjct: 76 LEKALGKYGVKIMPTRLAL-EKTDLGREVSWRLIDPRSDKYT--ASAFLHGGEVGYFIYV 132
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
P+GVR P+ + T I Q+ ++ DEG+ + GC P +H + E
Sbjct: 133 PRGVRVPVPIYTCLAITSNRRIQYAHNIVFVDEGAEAHVVTGCAVPHGVREGVHIGISEF 192
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
NA + ++ + W G ++ +S+ + + A YP
Sbjct: 193 YVSRNARLTFTMMHAWAEG-------MHIRPRTAVRVEEGGEYVSYYIIYSPVASLQTYP 245
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
L + SI +G D G+ + KN+++ +VS+ ++ G+S RG
Sbjct: 246 RVELS-TGARAYLASIIAGSGNGIYDQGSAAILQGKNSSAEVVSRAVAGGYSEIYARG-- 302
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
S+ A S+ +C LLI N +IP I S+ L HEA I+++ + Y +
Sbjct: 303 SIEAFEAESKGHIECLGLLISENALISSIPMITSRKPGAILTHEAAIGMIAEKEIQYLMS 362
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+G E+ A +++V GF+ +P+ E ++L+DI ++G
Sbjct: 363 KGFTEDEAKSVLVKGFMSIKAPGIPLTVEREVERLLDIITRSALG 407
>gi|125568868|gb|EAZ10383.1| hypothetical protein OsJ_00219 [Oryza sativa Japonica Group]
Length = 482
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 110/294 (37%), Gaps = 15/294 (5%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRC-PMELSTYF----RINEKGTGQFERTLIIADEG 238
+ + N+ D V++P+GV + F + R L++A++G
Sbjct: 174 DKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGDGSMMMSNPRVLVVAEKG 233
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ V+ +E + V+E++ ++A++ +S VQ + K + T
Sbjct: 234 AEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFAAAHTKWTVVQQNT-- 291
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS-NGFQQIDSGTKMLH 357
S + ++ G+ + G ++ + + S Q D +K++
Sbjct: 292 ------SSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQIHDLHSKLIL 345
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
S+ + + I++G N + G + V+R A + + LL+ + + P ++
Sbjct: 346 DHPRGRSQQIHRLIASGTGNGIFDGNIKVNRYAQQTDAGQETKCLLLSSKALVNVKPNLQ 405
Query: 418 SKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
H A + +++ RGI + A + F V+ ++P
Sbjct: 406 IIADDVKCTHGAAISGEHDPNAIYFLQARGIDAKTAADALNFAFGAHVINQIPF 459
>gi|115434288|ref|NP_001041902.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|53791281|dbj|BAD52546.1| putative SufD [Oryza sativa Japonica Group]
gi|113531433|dbj|BAF03816.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|215697126|dbj|BAG91120.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 110/294 (37%), Gaps = 15/294 (5%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRC-PMELSTYF----RINEKGTGQFERTLIIADEG 238
+ + N+ D V++P+GV + F + R L++A++G
Sbjct: 174 DKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGDGSMMMSNPRVLVVAEKG 233
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ V+ +E + V+E++ ++A++ +S VQ + K + T
Sbjct: 234 AEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFAAAHTKWTVVQQNT-- 291
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS-NGFQQIDSGTKMLH 357
S + ++ G+ + G ++ + + S Q D +K++
Sbjct: 292 ------SSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQIHDLHSKLIL 345
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
S+ + + I++G N + G + V+R A + + LL+ + + P ++
Sbjct: 346 DHPRGRSQQIHRLIASGTGNGIFDGNIKVNRYAQQTDAGQETKCLLLSSKALVNVKPNLQ 405
Query: 418 SKNSSCNLEHEATT-SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
H A + +++ RGI + A + F V+ ++P
Sbjct: 406 IIADDVKCTHGAAISGEHDPNAIYFLQARGIDAKTAADALNFAFGAHVINQIPF 459
>gi|145591313|ref|YP_001153315.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
gi|145283081|gb|ABP50663.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
Length = 397
Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/332 (21%), Positives = 141/332 (42%), Gaps = 17/332 (5%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV I E + H +L + YL +VP + + A+ + G + + GV+ +
Sbjct: 76 PGVEVYRIEEFVDAHRNLARDYLWRLVPPDYDKFTAVAALRGVGGYVIRVKSGVKVESPI 135
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+G Q ++I +EG+ GC LH + E + NA++K+
Sbjct: 136 LAC-LSIVRGGLQAPHNVVIVEEGAEAVVYTGCVIAPEAV-GLHVGISEFYVMRNAKLKF 193
Query: 275 STVQNWYPGDSQGKG-GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
V +W G+Y + + P +L+ + +
Sbjct: 194 IMVHSWNKAAHVRPRTGVY--------VEEGGEYVEYYANVASVKTLQTSPRIILK-DGA 244
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
S+ + G ID GT + + + +V++ I+ G S+ T R V ++ A
Sbjct: 245 KAHATSVVLGRGDAVIDIGTAAVLDGEGAGAELVTRAIATGSSSVTMRAVVEAYKPA--- 301
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
R +C LL+ + TIP + + N+ L HEA+ K++++ ++Y + +G+ E A+
Sbjct: 302 RGHVECSGLLMSDRARVVTIPQLSAFNNDAVLTHEASIGKLAEDEIYYLMAKGLTYEEAV 361
Query: 454 ALIVNGFV-REVLQKLPMEFAVEAQKLIDISL 484
+L+V GFV ++ + LP E A + ++ +
Sbjct: 362 SLLVRGFVTTDIHKYLP-EQARRYVESLERQI 392
>gi|317967990|ref|ZP_07969380.1| ABC transporter, membrane component [Synechococcus sp. CB0205]
Length = 412
Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats.
Identities = 61/330 (18%), Positives = 114/330 (34%), Gaps = 15/330 (4%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
GV E + E +L + T+ + + + + + R L
Sbjct: 96 GVTLPAGLEVLSE-AELAQGLGHTLAATACQQHWPVELNQASATQVLALRVKSRASAALE 154
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ R L++ +E + + + + L + V+E +A++++
Sbjct: 155 LVSASSGGMLPL--RILLVLEEKAQLDLSQ---LIEARAAGLVSLVIEAHLARSAQLRHG 209
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
V + + S+ + + + G + P + Q+
Sbjct: 210 LVAFGQSDAALFSH--------IAVEQEPESQAALSNVAAGWGLARHEPRLVQVQGQAHS 261
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ + G Q D+ + + V K ++AG + + G V V R A +
Sbjct: 262 LLRGLQLVGGQQIADTHSFVQFSGPEGELDQVHKAVAAGQGRSVFNGAVRVPREAQQTNA 321
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+LL+ + T P +E H AT S + + LFY RGI E A L
Sbjct: 322 AQLSRNLLLSDRARIDTKPELEIVADDVKCAHGATVSSLQTDELFYLQSRGIGAEQAAGL 381
Query: 456 IVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
+ F EVL+ LP E A + L + LE
Sbjct: 382 LKRAFCEEVLRALP-EPARQWCPLDQLELE 410
>gi|116073823|ref|ZP_01471085.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
gi|116069128|gb|EAU74880.1| ABC transporter, membrane component [Synechococcus sp. RS9916]
Length = 420
Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 109/285 (38%), Gaps = 15/285 (5%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
+ + N A+ T + I V + R L++ +E + + L
Sbjct: 133 EAWPVEFNHALATQVLALRIRGSV----PALEVLVTASAASLASTRMLLLVEEKAELEVL 188
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E P H+ V+EL A +++ V GG + + +
Sbjct: 189 EVIQGPAGSA---HSHVLELHLGQEARVRHGLV--------ALGGGDASLLGHLAVEQEP 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
RS +T + G + P + + + +++ QQ + T M ++
Sbjct: 238 RSTYEFTSVAKGWQLGRLEPRVVQVDGHASTVLKGLVLTDADQQFATHTAMRFEGEDGQL 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ K ++AG S++ + G V V R A + +LL+ + P +E
Sbjct: 298 DQLQKSVAAGRSHSIFNGAVQVPRAAQRTDAAQLSRNLLLSDRARVDAKPELEIVADDVR 357
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H AT +++ ++ LFY RGI A AL++ G+ ++V+ LP
Sbjct: 358 CAHGATVTQLQEDELFYLRSRGISAATAAALLLRGYCQDVVDLLP 402
>gi|326391946|ref|ZP_08213452.1| SufBD protein [Thermoanaerobacter ethanolicus JW 200]
gi|325992015|gb|EGD50501.1| SufBD protein [Thermoanaerobacter ethanolicus JW 200]
Length = 349
Score = 169 bits (429), Expect = 7e-40, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 11/282 (3%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+ G + I + + + NE+ + +I A+ S V+ + +
Sbjct: 67 FYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNS---GT 123
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
H + +++A + + + +Q + G + ++W+ +
Sbjct: 124 KGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNN--------LVIVGKNAMVNWSNVV 175
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS ++ + L SI + Q+ D K+ H A TTS + KG G
Sbjct: 176 IGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKG 235
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ T+ G + + +GA ++ LL+ + IP + H A+ +I
Sbjct: 236 SAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQI 295
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
++ L+Y + RG E A L+V + V+ +P + E
Sbjct: 296 DEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREI 337
>gi|254431578|ref|ZP_05045281.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
gi|197626031|gb|EDY38590.1| ABC transporter, membrane component [Cyanobium sp. PCC 7001]
Length = 376
Score = 169 bits (429), Expect = 8e-40, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 10/257 (3%)
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
L + Q R L++ + G+ + L+ Q + VVE+ + +
Sbjct: 114 PLELPWNAGSGAGLQARRLLLVLEAGASLDLLQVIRGSG---PQALSLVVEVEMGSGSRL 170
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
T+ + G G + +T + S +S G A+ + P + +
Sbjct: 171 TLGTL-------APGGDGQASLLTHVAVRQASGSSLSLVTATAGWALLRQEPRIVQADGE 223
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ + + G Q D+ +++ + K ++ ++ + G V V R A
Sbjct: 224 ASTTLRGLQLVKGDQIADTHSQVRFDGPAGRLDQLHKAVADERGHSIFNGAVQVPRAAQQ 283
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ +LL+ + T P +E H AT +++ E LFY RGI A
Sbjct: 284 TNASQLSRNLLLSDRARVDTKPELEIVADDVKCAHGATVTRLQREQLFYLQSRGIAAAQA 343
Query: 453 IALIVNGFVREVLQKLP 469
AL+ GF EVL+ LP
Sbjct: 344 AALLQRGFCEEVLRDLP 360
>gi|167036549|ref|YP_001664127.1| SufBD protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320114979|ref|YP_004185138.1| SufBD protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855383|gb|ABY93791.1| SufBD protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928070|gb|ADV78755.1| SufBD protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 349
Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 11/282 (3%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+ G + I + + + NE+ + +I A+ S V+ + +
Sbjct: 67 FYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNS---GT 123
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
H + +++A + + + +Q + G + ++W+ +
Sbjct: 124 KGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNN--------LVIVGKNAMVNWSNVV 175
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS ++ + L SI + Q+ D K+ H A TTS + KG G
Sbjct: 176 IGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKG 235
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ T+ G + + +GA ++ LL+ + IP + H A+ +I
Sbjct: 236 SAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQI 295
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
++ L+Y + RG E A L+V + V+ +P + E
Sbjct: 296 DEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREI 337
>gi|318040527|ref|ZP_07972483.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. CB0101]
Length = 414
Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 8/212 (3%)
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H+ V+E A + + V + + + S + + +G
Sbjct: 194 HSLVIEAHLARGARLSHGLVALGQADAA--------LLAHVALEQEPESDAQLSSVSSGW 245
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ P + + + + +G + D+ + + + K ++AG
Sbjct: 246 GLARLEPRAVQVDGSAQTTLRGLQLVDGQRIADTHSFVEFKGPEGQLDQLHKAVAAGQGR 305
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ + G V V R A + +LL+ + T P +E H AT S + +
Sbjct: 306 SVFNGAVRVPRAAQRTNAAQLSRNLLLSDRARIDTKPELEIVADDVKCAHGATVSSLQTD 365
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
LFY RGI + A L+ F EVL++LP
Sbjct: 366 ELFYLQSRGIGADQAAGLLQRAFCEEVLRELP 397
>gi|307266351|ref|ZP_07547890.1| SufBD protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918658|gb|EFN48893.1| SufBD protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 349
Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 11/282 (3%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+ G + I + + + NE+ + +I A+ S V+ + +
Sbjct: 67 FYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNS---GT 123
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
H + +++A + + + +Q + G + ++W+ +
Sbjct: 124 KGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNN--------LVIVGKNAMVNWSNVV 175
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS ++ + L SI + Q+ D K+ H A TTS + KG G
Sbjct: 176 IGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKG 235
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ T+ G + + +GA ++ LL+ + IP + H A+ +I
Sbjct: 236 SAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQI 295
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
++ L+Y + RG E A L+V + V+ +P + E
Sbjct: 296 DEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREI 337
>gi|167040941|ref|YP_001663926.1| SufBD protein [Thermoanaerobacter sp. X514]
gi|300913848|ref|ZP_07131165.1| SufBD protein [Thermoanaerobacter sp. X561]
gi|307725466|ref|YP_003905217.1| SufBD protein [Thermoanaerobacter sp. X513]
gi|166855181|gb|ABY93590.1| SufBD protein [Thermoanaerobacter sp. X514]
gi|300890533|gb|EFK85678.1| SufBD protein [Thermoanaerobacter sp. X561]
gi|307582527|gb|ADN55926.1| SufBD protein [Thermoanaerobacter sp. X513]
Length = 349
Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 11/282 (3%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+ G + I + + + NE+ + +I A+ S V+ + +
Sbjct: 67 FYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNS---GT 123
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
H + +++A + + + +Q + G + ++W+ +
Sbjct: 124 KGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNN--------LVIVGKNAMVNWSNVV 175
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS ++ + L SI + Q+ D K+ H A TTS + KG G
Sbjct: 176 IGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKG 235
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ T+ G + + +GA ++ LL+ + IP + H A+ +I
Sbjct: 236 SAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQI 295
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
++ L+Y + RG E A L+V + V+ +P + E
Sbjct: 296 DEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREI 337
>gi|256752819|ref|ZP_05493661.1| SufBD protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748294|gb|EEU61356.1| SufBD protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 349
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 104/282 (36%), Gaps = 11/282 (3%)
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
+ G + I + + + NE+ + +I + S V+ + +
Sbjct: 67 FYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIETEANSQVTIVFDYNS---GT 123
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
H + +++A + + + +Q + G + ++W+ +
Sbjct: 124 KGFHNGITQVIAKEGSTVNVVKIQRLGDEFNDFDNN--------LVIVGKNAMVNWSNVV 175
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS ++ + L SI + Q+ D K+ H A TTS + KG G
Sbjct: 176 IGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKG 235
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ T+ G + + +GA ++ LL+ + IP + H A+ +I
Sbjct: 236 SAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQI 295
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
++ L+Y + RG E A L+V + V+ +P + E
Sbjct: 296 DEDKLYYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREI 337
>gi|329572250|gb|EGG53910.1| SufB/sufD domain protein [Enterococcus faecalis TX1467]
Length = 173
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 1/171 (0%)
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
L GE + E +AIS G Q T++ + A + I+ G+
Sbjct: 1 MNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTNKAPYSIGHILQHGVIRE 60
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
T+ G + +GA + + L++ + P + + H A+ ++
Sbjct: 61 RGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLIDENEVTAGHAASVGRV 120
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDISL 484
E ++Y + RG+ +E A L++ GF+ V+ +P+ E E ++I+ L
Sbjct: 121 DPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEFVEVIEGKL 171
>gi|302832968|ref|XP_002948048.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
gi|300266850|gb|EFJ51036.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
Length = 492
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 88/434 (20%), Positives = 147/434 (33%), Gaps = 49/434 (11%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
++ R + T++ P+ Y F D+ ++ V ELL+ +
Sbjct: 62 LVTLREASTGALATLRMPTTRNEEYR---FTDISPLLK-TAVEPAAPGAVVTSELLQRTD 117
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
L V VD V S GV P+ A V
Sbjct: 118 -----------LPDAAVVAVVVDGVLRSELCRGL---ADLPKGVYVGPLEGA----SAAV 159
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF----- 228
+ L ++ +A LN ++ V G P + +
Sbjct: 160 VEKLGSLSNSRGGPFAVLNGSLTPGVLVVAAEPGASLPGPVFVLHVASASSAAAIANANA 219
Query: 229 ERTLIIADEGSYVSYLEGC-------------TAPQRDENQLHAAVVELVALDNAEIKYS 275
R L+ A GS V +E +A + L ++ EL AE+K+S
Sbjct: 220 PRLLVHAGVGSLVEVVEEYVGLEDSTTASAAASASSDHGHYLTVSMAELFLEPAAEVKHS 279
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
VQ G KG + + + RS+ + T+ G+AI + L G ++
Sbjct: 280 YVQREAAGSFHFKGTLVH--------QAERSRYTVTEASVGAAIARHDLTILQGGPETHT 331
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSR 394
E + Q D +++ + T+ + K I + + G V V+R A +
Sbjct: 332 EMGHFLLCGPNQLHDLHSRLQLDHPHGTANQLHKCIVSHASGRGVFDGNVKVNRAAQKTD 391
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+LL+ + P ++ H S + DE LFY RGI EAA
Sbjct: 392 AGQLSRNLLLVPLATVNVKPNLQIIADDVKCTHGCAVSDLRDEELFYFRARGISAEAARQ 451
Query: 455 LIVNGFVREVLQKL 468
+V F EV+Q++
Sbjct: 452 ALVFSFGSEVVQRM 465
>gi|315656538|ref|ZP_07909425.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492493|gb|EFU82097.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 389
Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 94/267 (35%), Gaps = 21/267 (7%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+GT I A++ S + + +E+ A A++ ++Q W
Sbjct: 130 TAEGTDTVGHVRIHAEKNSQATIVLRHRGGGSL-----NETLEVKAEPGAKLNVVSLQTW 184
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
V + G + + + G L E+S +
Sbjct: 185 DDTAVH--------VATQQVTLGENASVKHANVTLGGDSVRIAMGVNLPAERSDLNLLGL 236
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQC 399
+N Q + + H + + SR+ KG G + + G V + A + ++
Sbjct: 237 YFTNSEQHQEHRLFIEHKGQKSKSRVTYKGALQGQDAHAVWVGDVGIGSQAFGTDSYELN 296
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
+L++G ++P +E N H + T + DE LFY RGI A L+V
Sbjct: 297 RNLVLGKGPRVDSVPNLEIHNGEIEGAGHASATGRFDDEQLFYLQSRGIDAVNAKRLVVR 356
Query: 459 GFVREVLQKLPMEFAVEAQKLIDISLE 485
F E+L L E +L D LE
Sbjct: 357 AFYAELLNML------EIPELTDYVLE 377
>gi|82541216|ref|XP_724864.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23479664|gb|EAA16429.1| Uncharacterized protein family UPF0051, putative [Plasmodium yoelii
yoelii]
Length = 269
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 119/281 (42%), Positives = 167/281 (59%), Gaps = 15/281 (5%)
Query: 69 KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGV 128
K P W+ P I++D++ YY++ + + L +
Sbjct: 3 KLPDWSFFECPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTI 48
Query: 129 QTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFY 188
++D +FDS+SV+ T + LKK G+IF+ + + + ++P L+KKYL TVV DNF+
Sbjct: 49 LIKNNSIDVIFDSISVLHTTQYFLKKLGIIFLSLFDVVLKYPLLIKKYLGTVVSYKDNFF 108
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
A +NS +F++GSF Y+ K ++C LSTYF+ N QFERTL+IA E SYV YLEGCT
Sbjct: 109 ANINSIIFSEGSFCYVSKYIKCSFNLSTYFKTNSYDFAQFERTLLIASEFSYVGYLEGCT 168
Query: 249 APQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
A E+QLH A+VE++ +N +KY T+QNWY GD G GG+YNF TKRG C SK+
Sbjct: 169 ALMYKESQLHIAIVEVIVKNNGYVKYYTLQNWYRGDYLGNGGLYNFTTKRGICF-HFSKL 227
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
W Q+E GS ITWKYPS +L+G S FYSI+ + Q
Sbjct: 228 DWIQIELGSIITWKYPSTILKGNYSISNFYSISFLSDMQIA 268
>gi|194477105|ref|YP_002049284.1| ABC transporter, membrane component [Paulinella chromatophora]
gi|171192112|gb|ACB43074.1| ABC transporter, membrane component [Paulinella chromatophora]
Length = 417
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/308 (19%), Positives = 115/308 (37%), Gaps = 16/308 (5%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
++ LN+A + + V+ + L F G Q R L++ +E
Sbjct: 116 KATGCQHHWPITLNNANANYCLALRVEGMVK--IPLELVFAPMSVGI-QAVRVLLLLEER 172
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +S L+ QL ++ +E +++ + G G +
Sbjct: 173 AKLSLLQ---VNMGKGLQLLSSTLEAHLGRESQLDH--------GILAFGDGEAGLLAHT 221
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+ +S T + G + P ++ + + + QID+ + +
Sbjct: 222 AIVQKPKSNYKETYVIKGWGLARFEPRITQISGEAETTLRGLQVVDADNQIDTHSYVSFE 281
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
V K I+ ++ + G + V A ++ +LLI NN T P +E
Sbjct: 282 GPGGKLDQVHKAIAEAKGHSIFNGIIRVPSLAQGTKASQLSRNLLISNNARIDTKPELEI 341
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV--EA 476
H AT +++ E LFY RG+ + A AL+ G+ +++L LP + +
Sbjct: 342 VADDVKCTHGATVTQMQQEELFYLQSRGLAADQAAALVKRGYYQDILNDLPNQANIWSPM 401
Query: 477 QKLIDISL 484
KLI+ +L
Sbjct: 402 SKLIESNL 409
>gi|258544528|ref|ZP_05704762.1| abc transporter ATP-binding protein [Cardiobacterium hominis ATCC
15826]
gi|258520263|gb|EEV89122.1| abc transporter ATP-binding protein [Cardiobacterium hominis ATCC
15826]
Length = 377
Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 11/236 (4%)
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R I A + S ++ A + V+ + A D A+I + W+ GD+
Sbjct: 126 RIHIRAGKNSRSAFWIDYRAS---RSGAQLPVITVNAEDGAQID---IALWFHGDAG--- 176
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
V + + S++ L+ G + L GE + F + + G Q
Sbjct: 177 --TAQVAQAAVQQATDSRVRINALQAGGDLLRLDIHSELHGEGTHFAFGGVQLLTGKQTG 234
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D + HL +N+ S +G + + G + V GA + +L+ ++
Sbjct: 235 DYHLNVRHLTENSESHQRVRGALDDAALGIFDGMIYVAHGAQKTDARQDSRYILLSDSAR 294
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+H++P +E H +TT K+ +E LFY RGI EAA +++ F+ E +
Sbjct: 295 SHSVPRLEIYADDVQCAHGSTTGKVDEEALFYLRSRGIGYEAARKMLILSFLHEAV 350
>gi|297545580|ref|YP_003677882.1| SufBD protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|296843355|gb|ADH61871.1| SufBD protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 349
Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 119/316 (37%), Gaps = 16/316 (5%)
Query: 166 ICEHPDLVKKYLSTVVPVG-----DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
I + DL + T++ D+ + + ++ G ++ + + +
Sbjct: 33 IKKIKDLHHLPIETLISANKTFGIDDKFVNMVKTLYNTGFYIKTFQNTSVEKPIVVDYIT 92
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+E+ + ++ + S + + + H + E++A + A + +Q
Sbjct: 93 DEQNDTLIDYNIVEIEANSSATVVFDYNSGAHG---FHNGITEVIAKEGATVNIVKIQRL 149
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G + ++W+ + G+ ++ + L + SI
Sbjct: 150 GNEFNDFDNN--------LVIVGKDATVNWSNVVIGAKMSTFDVTVYLDEIGATFISKSI 201
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
+ Q+ D K+ H A +TS + KG G + T+ G + + +GA ++
Sbjct: 202 FLGVDSQKYDMAYKVYHQAPKSTSSVDLKGALKGSAEATFIGNIDIKKGAKKAKAEENET 261
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
LL+ + TIP + +H A+ +I ++ L+Y + RG E A L+V
Sbjct: 262 VLLLDKTVKSVTIPALYCGEDDVVAKHSASAGQIDEDKLYYVMSRGFSFEEARLLMVQAI 321
Query: 461 VREVLQKLPMEFAVEA 476
+ V+ +P + E
Sbjct: 322 LNPVIDLIPYDPVKEI 337
>gi|218672153|ref|ZP_03521822.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli GR56]
Length = 179
Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+ G + + + GE + I + D + H +T S V +
Sbjct: 1 FVINAGGRLVRQELHIKVTGEGADLTLRGINLLGAESHTDVTMVLGHDVPHTGSTEVIRN 60
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+ + ++G + V A + C++LL+ ++ P +E H AT
Sbjct: 61 VVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGAT 120
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK-LIDISLE 485
+ I HL+Y + RGIPE A A++VN FV E++++L E VEA + +I LE
Sbjct: 121 VTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWLE 176
>gi|254293809|ref|YP_003059832.1| SufBD protein [Hirschia baltica ATCC 49814]
gi|254042340|gb|ACT59135.1| SufBD protein [Hirschia baltica ATCC 49814]
Length = 408
Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats.
Identities = 73/433 (16%), Positives = 133/433 (30%), Gaps = 61/433 (14%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
R A+ + P R + DL P VD + + +
Sbjct: 32 RRTRAFEAFAEKGLP---HRRVEGWRWSDLRAALKPVEA-------AVDLSIKDVFADVD 81
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
P+ +K + +GV + +A
Sbjct: 82 APVFRFTRNGLEAPAK--------------------RPAGVRWTENIDA----------- 110
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
+ AL SA+ T S + I G + L + K + ++
Sbjct: 111 -PAFAAAEELPMGALASALATGPSVLTIEIGAKLSSPLRIIVDADAKD--CYAHVEVLLR 167
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
EG+ + +E + V+E A++ Q+ Q +
Sbjct: 168 EGASATIVETHLNQGG----FSSVVLEYNLEKGAKVDRVIYQSAGVDAVQIVSANVHL-- 221
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+K + T TGS + + R + + + + + D + +
Sbjct: 222 ------YEGTKFNQTAYATGSKLCRIETRLIHREPDAEAILNAAYLLDDKRHADFTSFVR 275
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H A + + V+KG Y+GK V R A + ++LL+ + + P +
Sbjct: 276 HSAGHCVTSQVTKGAVKKGGKGAYQGKFYVARDAQKTDASMAHNTLLLEDGAEVNAKPEL 335
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME----- 471
E H T + E LFY QRGIP A A++ F+ E + +
Sbjct: 336 EIYADDVQCAHGNTAGALDAEALFYMRQRGIPLITAKAMLTQSFIAEAFADINDDGLRDT 395
Query: 472 FAVEAQKLIDISL 484
EA++ + SL
Sbjct: 396 LEEEARQWLMKSL 408
>gi|218187437|gb|EEC69864.1| hypothetical protein OsI_00223 [Oryza sativa Indica Group]
Length = 283
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 98/266 (36%), Gaps = 14/266 (5%)
Query: 211 PMELSTYF----RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
+ F + R L++A++G+ V+ +E + V+E++
Sbjct: 3 DDPVHIMFSYSGCGDGSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIV 62
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
++A++ +S VQ + K + T S + ++ G+ +
Sbjct: 63 EEDAKVVHSYVQQQSFAAAHTKWTVVQQNT--------SSNYEFVEVSIGARLNRHNLHV 114
Query: 327 LLRGEQSCGEFYSIAIS-NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVS 385
G ++ + + S Q D +K++ S+ + + I++G N + G +
Sbjct: 115 QQLGPETNTQLSTFHFSAQNKQIHDLHSKLILDHPRGRSQQIHRLIASGTGNGIFDGNIK 174
Query: 386 VHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT-SKISDEHLFYCLQ 444
V+R A + + LL+ + + P ++ H A + +++
Sbjct: 175 VNRYAQQTDAGQETKCLLLSSKALVNVKPNLQIIADDVKCTHGAAISGEHDPNAIYFLQA 234
Query: 445 RGIPEEAAIALIVNGFVREVLQKLPM 470
RGI + A + F V+ ++P
Sbjct: 235 RGIDAKTAADALNFAFGAHVINQIPF 260
>gi|213421382|ref|ZP_03354448.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 165
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 62/141 (43%)
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L GE + S+A+ + D+ T + H SR + K I + + G ++V
Sbjct: 3 LNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHKTIVSDKGRAVFNGLINVA 62
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
+ + + ++LL+G T P +E H AT +I DE +FY RGI
Sbjct: 63 QHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGATIGRIDDEQMFYLQSRGI 122
Query: 448 PEEAAIALIVNGFVREVLQKL 468
++ A +I+ F E+ + +
Sbjct: 123 RQQEARHMILYAFAAELTEAI 143
>gi|119720435|ref|YP_920930.1| SufBD protein [Thermofilum pendens Hrk 5]
gi|119525555|gb|ABL78927.1| SufBD protein [Thermofilum pendens Hrk 5]
Length = 406
Score = 167 bits (423), Expect = 4e-39, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 166/434 (38%), Gaps = 35/434 (8%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R+ A R+ L+ P + + + P P + +
Sbjct: 6 RVEAARKALSKPSPYGPDLDLSSFR------------VAAPGYSAGEPPRAVSS------ 47
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
++E+ + + S V V + + ++ GV+ P+S+A+ E +
Sbjct: 48 SVKERVGIDVSRASYVQVGETIFARVLAERL---FREYGVVVKPLSKALKEDGPAARVAW 104
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
S + P D + A G +VY+P GV+ + + T + QF ++ DE
Sbjct: 105 SLIDPATDKYTAYAYLYGGEAGYYVYVPPGVKVDVPIYTCLSLFTGEEVQFAHNVVYLDE 164
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
G+ GC P + LH + E A + ++ + W G V
Sbjct: 165 GAEAVVTTGCLVPHGVKGGLHVGLSEFFVGPGARLVFTMLHAWGEG---------THVRP 215
Query: 298 RGDCRGMRS--KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
R R +S+ + + A YP L ++ + S+ G D G
Sbjct: 216 RTAVRVEEGGEYVSYYAVYSPVASLQTYPRVYLY-RRASAKLTSVVAGTGPGVYDVGGGA 274
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+ L + +++ +VS+ + + S RG SV A + +C +++ + +P
Sbjct: 275 VLLGEGSSAELVSRVLGSKGSTIVSRG--SVEAEANDVKGHIECLGVMLDPSSTIEAVPV 332
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
++S+ L HEA +S E + Y + RG EE A ++++ G++ LP E
Sbjct: 333 LKSRVERAELTHEAAIGMLSGEKIEYLMARGFSEEEARSILLRGYLTAETPGLPESVKGE 392
Query: 476 AQKLIDISLEGSVG 489
+++I+ + ++G
Sbjct: 393 IERVIEYVVRHALG 406
>gi|227875604|ref|ZP_03993743.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35243]
gi|269977153|ref|ZP_06184126.1| FeS assembly protein SufD [Mobiluncus mulieris 28-1]
gi|306818913|ref|ZP_07452634.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35239]
gi|307701041|ref|ZP_07638066.1| FeS assembly protein SufD [Mobiluncus mulieris FB024-16]
gi|227843789|gb|EEJ53959.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35243]
gi|269934456|gb|EEZ91017.1| FeS assembly protein SufD [Mobiluncus mulieris 28-1]
gi|304648315|gb|EFM45619.1| FeS assembly protein SufD [Mobiluncus mulieris ATCC 35239]
gi|307614036|gb|EFN93280.1| FeS assembly protein SufD [Mobiluncus mulieris FB024-16]
Length = 389
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 63/321 (19%), Positives = 112/321 (34%), Gaps = 21/321 (6%)
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
+ V D A + + + + P + E G+ L
Sbjct: 84 HESDTPLVAAPFDRVAAVGWNNIRET---MRVTINGHAPQPVFLDVHAGEPGSAPVVGHL 140
Query: 233 -IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
I+A EG + + T VE++A +A ++ ++Q W
Sbjct: 141 EIVAREGCDATLVLRHTGSG-----QLNETVEILAERHATLRVLSLQEWEADAKH----- 190
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
V S I + G L + + +N +
Sbjct: 191 ---VATHQLRLAEGSTIQHAVVTLGGDTVRICSGVTLPEPHADINMLGLYFTNAGIHHEQ 247
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ H+A + SR+ KG G + + G V + A + ++ +L++G
Sbjct: 248 RLFIDHVAAGSKSRVTYKGALQGQDAHAVWVGDVGIGPVAYATDSYESNRNLVLGKGPRV 307
Query: 411 HTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
++P +E N H + T + DE LFY + RGI A L+V F E+L ++
Sbjct: 308 DSVPNLEIHNGQIEGAGHASATGRFDDEQLFYLMSRGIAPAEAKRLVVKAFYAELLNQMD 367
Query: 470 M-EFAVEAQKLIDISL-EGSV 488
+ E A +L+D L EGS+
Sbjct: 368 VPELAAHVLELVDNRLSEGSL 388
>gi|114569868|ref|YP_756548.1| SufBD protein [Maricaulis maris MCS10]
gi|114340330|gb|ABI65610.1| Iron-regulated ABC transporter permease protein SufD [Maricaulis
maris MCS10]
Length = 342
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 89/260 (34%), Gaps = 11/260 (4%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
G ++ G ++ +E H + + A + V +
Sbjct: 85 TASGGACAGEAELVVPAGVRLTLIERLAGEAGALGNWH---MSIRIEAGAWLDRIVVADH 141
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ FV + ++ T ++TG+ ++ G+ + +
Sbjct: 142 HQAAV--------FVGSAEITLAEGAHLNQTMIDTGAKLSRNETHIYHPGQGATVDLGGA 193
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
+ + D+ T + H ++ + KG A + ++GK V R A +
Sbjct: 194 YVLAAGRHADTTTVVHHAGPGCQTKQLVKGAVASGGHGVFQGKFIVDRIAQQTDARMTHR 253
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
+L++G P +E H + + LFY QRG+PE A AL++ +
Sbjct: 254 ALMLGEKAEIDAKPELEIYADDVQCAHGNALGTLDETALFYMRQRGLPEVKARALLIESY 313
Query: 461 VREVLQKLPMEFAVEAQKLI 480
+ E L + E E K I
Sbjct: 314 LAEPLDMISDEALREELKSI 333
>gi|269118906|ref|YP_003307083.1| SufBD protein [Sebaldella termitidis ATCC 33386]
gi|268612784|gb|ACZ07152.1| SufBD protein [Sebaldella termitidis ATCC 33386]
Length = 375
Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats.
Identities = 61/336 (18%), Positives = 142/336 (42%), Gaps = 16/336 (4%)
Query: 153 KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPM 212
++ G+ I+EA + ++KY + + F+ + + + G F++I + +
Sbjct: 56 EQDGLTVKDINEAFQD----IEKYNNDNEYGLNEFFNSQMFSFYNSGKFIHINERKKLED 111
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ + N++ + +I+A++ S + + + D H +++++A N+++
Sbjct: 112 TVCINYNFNKENNLLIDYNVIVAEDFSEGTVIINY-NSEDDTEAYHNGMIKIIAKPNSKL 170
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
K +QN YNF + + G + + +E G+ + L
Sbjct: 171 KIIKIQNLNL-------NSYNFEGSKAEIFG-NADAAIYSMEMGAKVNAVSNKSYLEENG 222
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E + +++ +++D ++ ++T+ I +G + +RG + +GAAH
Sbjct: 223 AKIEIWPGYLADKDRKVDLEYSVIFRGRDTSGIIEGRGAVKDTARKVFRGNLYFKKGAAH 282
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S ++L+ + +IP + EH A+ K+ + LFY + RG+ E A
Sbjct: 283 SVGREGEFAILLDKGVRSDSIPGLFCDEDDVIGEHSASIGKVDEAKLFYLMSRGLSENNA 342
Query: 453 IALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
LI+ + +L + KL++ LE +
Sbjct: 343 KKLIIESSFKPILNSIDD--TDMKNKLLE-ELEKRI 375
>gi|4210404|emb|CAA10636.1| Ycf24 protein [Skeletonema costatum]
Length = 180
Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats.
Identities = 133/180 (73%), Positives = 157/180 (87%)
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
AVFTDGSF YIPK V CP++LSTYFRIN++ +GQFERTLIIA+E S VSYLEGCTAPQ D
Sbjct: 1 AVFTDGSFCYIPKDVICPLDLSTYFRINDQNSGQFERTLIIAEENSKVSYLEGCTAPQYD 60
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
NQLHAA+VEL+AL NA IKYSTVQNWY GD +G+GG+YNFVTKRG C G SKISWTQ+
Sbjct: 61 NNQLHAAIVELIALKNATIKYSTVQNWYSGDQKGQGGVYNFVTKRGLCAGDFSKISWTQV 120
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
ETGS+ITWKYPSC+L G+ + GEFYS+A++N +QQ D+GTKM+H+ +NT SRIVSKGISA
Sbjct: 121 ETGSSITWKYPSCVLVGDSAQGEFYSVALTNNYQQADTGTKMIHIGRNTRSRIVSKGISA 180
>gi|33239536|ref|NP_874478.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237061|gb|AAP99130.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 405
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 109/302 (36%), Gaps = 12/302 (3%)
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
+L K + + + + + L ++ G +
Sbjct: 105 NELKKYFSKFSFKQNRDDIFLKKFNEAINSQLIALKIKKDSNASLEIILPKSKNGLSPYR 164
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
LI+ ++G+ + LE ++ H+ ++E+ + A + + +
Sbjct: 165 VMLIV-EKGAKLDILE---ILNSEDFCAHSNLIEIYIENQAIVNHGCIAIGKQYSKLLSH 220
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ S S+ + + + + I++ + I
Sbjct: 221 --------ISIIQEKESVYSFCSMLEDWYFSRIEQHIFQLDGNASTNIKGLQITSNSENI 272
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
++ + + N + + K I+A S++ + G + V + A ++ +LL+ +N
Sbjct: 273 ETHSIVKFGGPNGSLEQIHKAIAANESHSIFNGLIDVPQVAQQTKASQISKNLLLSSNAK 332
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P + H AT S++ E LFY RGI + A +LI+NGF E+L +P
Sbjct: 333 IDTSPKLNIIADDVQCNHGATISQLEKEELFYLQSRGIDQNLANSLIINGFCNEILNGMP 392
Query: 470 ME 471
+E
Sbjct: 393 LE 394
>gi|289579436|ref|YP_003478063.1| SufBD protein [Thermoanaerobacter italicus Ab9]
gi|289529149|gb|ADD03501.1| SufBD protein [Thermoanaerobacter italicus Ab9]
Length = 349
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 51/316 (16%), Positives = 118/316 (37%), Gaps = 16/316 (5%)
Query: 166 ICEHPDLVKKYLSTVVPVG-----DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI 220
I + DL + T++ D+ + + ++ G ++ + + +
Sbjct: 33 IKKIKDLHHLPIETLISANKTFGIDDKFVNMVKTLYNTGFYIKTFQNTSVEKPIVVDYIT 92
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+E+ + ++ + S + + + H + E++A + A + +Q
Sbjct: 93 DEQNDTLIDYNIVEIEANSSATVVFDYNSGAHG---FHNGITEVIAKEGATVNIVKIQRL 149
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G + ++W+ + G+ ++ + L + SI
Sbjct: 150 GNEFNDFDNN--------LVIVGKDATVNWSNVVIGAKMSTFDVTVYLDEIGATFISKSI 201
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
+ Q+ D K+ H A +TS + KG G + T+ G + + +GA ++
Sbjct: 202 FLGVDSQKYDMAYKVYHQAPKSTSSVDLKGALKGSAEATFIGNIDIKKGAKKAKAEENET 261
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
LL+ + IP + +H A+ +I ++ L+Y + RG E A L+V
Sbjct: 262 VLLLDKTVKSVAIPALYCGEDDVVAKHSASAGQIDEDKLYYVMSRGFSFEEARLLMVQAI 321
Query: 461 VREVLQKLPMEFAVEA 476
+ V+ +P + E
Sbjct: 322 LNPVIDLIPYDPVKEI 337
>gi|315655549|ref|ZP_07908448.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 51333]
gi|315490204|gb|EFU79830.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 51333]
Length = 389
Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 92/267 (34%), Gaps = 21/267 (7%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+GT I A++ S + + +E+ A A++ ++Q W
Sbjct: 130 TAEGTDTVGHVRIHAEKNSQATIVLRHRGGGSL-----NETLEVKAEPGAKLNVVSLQAW 184
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ + + + G L E+S +
Sbjct: 185 DATAVH--------MATHQLTLSENASVKHANVTLGGDSVRIAMGVNLPAERSDLNLLGL 236
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQC 399
+N Q + + H + + SR+ KG G + + G V + A + ++
Sbjct: 237 YFTNSEQHQEHRLFIEHKGQKSKSRVTYKGALQGQDAHAVWVGDVGIGPQAFGTDSYELN 296
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
+L++G ++P +E N H + T + DE LFY RGI A L+V
Sbjct: 297 RNLVLGKGPRVDSVPNLEIHNGEIEGAGHASATGRFDDEQLFYLQSRGIDAVNAKRLVVR 356
Query: 459 GFVREVLQKLPMEFAVEAQKLIDISLE 485
F E+L L E +L D LE
Sbjct: 357 AFYAELLNML------EIPELTDYVLE 377
>gi|219128225|ref|XP_002184318.1| FeS assembly protein suf [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404119|gb|EEC44067.1| FeS assembly protein suf [Phaeodactylum tricornutum CCAP 1055/1]
Length = 690
Score = 166 bits (420), Expect = 8e-39, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 27/273 (9%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL---HAAVVELVALDNAEIKYSTV 277
+ KG RTLI+A+E S +S ++ C + + + A + +S +
Sbjct: 376 HAKGVACHPRTLIVAEESSLLSVVQSCVDLDDNSAHTPKLYNGYTQCFVHQKANVTHSYL 435
Query: 278 QNWYPGDSQGKGGI-----------------------YNFVTKRGDCRGMRSKISWTQLE 314
+ + G + G + T +
Sbjct: 436 EESGGIVTAGVERSDDEFVADETKPREIESRRKDLRDTHLEAIDVHIMGADAAYEGTIMS 495
Query: 315 TGS-AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G S L + +++ G Q++D T + H+A+ TTSR V K +
Sbjct: 496 LGGSGRVRVALSVALLQPGAHAGVNGFSLAGGAQRVDIKTNIHHVAQGTTSRQVQKNMIG 555
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G + +RG++ V + A + + ++L+ + A +P +E H AT S
Sbjct: 556 GRATGAFRGRIRVEQSAQQTESEQLSRTVLLSDKARAWAVPSLEIIADDVQCAHGATVSD 615
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
+S+E LFY RG+ + A L++ F +V
Sbjct: 616 LSEEELFYLRSRGMGQAMARNLLMYAFSGDVSD 648
>gi|269218371|ref|ZP_06162225.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212230|gb|EEZ78570.1| FeS assembly protein SufD [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 389
Score = 166 bits (420), Expect = 8e-39, Method: Composition-based stats.
Identities = 62/343 (18%), Positives = 115/343 (33%), Gaps = 27/343 (7%)
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
T + V + A + + V D A A +
Sbjct: 61 YETLDAAQAEVLVSAGSVESASR-----GDERVGLVGKPEDRTGALAWQAA------ERV 109
Query: 205 PKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL 264
T I+ + L++A+E + + + VE+
Sbjct: 110 HVVTVAGEAPDTMIAIDAPEGMSVAQLLVLAEEDAKGTVVIEHAGVGDLAET-----VEI 164
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
A D +E+ +VQ V+ + G +K+ + G
Sbjct: 165 EAKDRSELTVVSVQEAERSARH--------VSHQRIRVGRDAKVRHIVVTLGGDAVRIAT 216
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGK 383
S GE E I+ G + + + H N SR KG G ++ + G
Sbjct: 217 SSEFAGEGGDVELLGAYITEGGEHHEHRLFVDHNPPNCISRATYKGALQGEDAHSVWIGD 276
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYC 442
V + A ++ + +L++ A ++P +E + H + T + +E LFY
Sbjct: 277 VLIRPTATNTDTYELNRNLVLTRGGKADSVPNLEIETGEIAGAGHASATGRFDEEQLFYL 336
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISL 484
RG+PE+ A L+V GF E+++ + +E + I+ L
Sbjct: 337 RARGVPEDVARRLVVRGFFAELVESIGVESVQAKLMAAIEREL 379
>gi|304321533|ref|YP_003855176.1| hypothetical protein PB2503_09909 [Parvularcula bermudensis
HTCC2503]
gi|303300435|gb|ADM10034.1| hypothetical protein PB2503_09909 [Parvularcula bermudensis
HTCC2503]
Length = 393
Score = 166 bits (420), Expect = 9e-39, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 91/257 (35%), Gaps = 12/257 (4%)
Query: 216 TYFRINEKGTGQF-ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
R G G +R I EG+++ +E ++ ++ D A +
Sbjct: 134 IVLRRMSDGEGYHGDRVRIGVAEGAHLRLIETHEVAGGGA--FSNSLTDIDLADGAHLDR 191
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+Q G G R G ++I L G+ ++ G +
Sbjct: 192 FVLQPAAQGIIAG------LARLRRTATG-SARIRQLVLSGGAKLSRHETLI--SGGHAD 242
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ + + D + + H + +R + KGI ++GK V R A +
Sbjct: 243 IILDGLYRLSEERHADLTSLIDHEGPDGRTRQLVKGIVGDQGRGVFQGKFRVDRKAQRTD 302
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+LL+ P +E H + + DE LFY QRG+ EEAA
Sbjct: 303 AQMSHHALLLSEGAQVSAKPELEIYADDVECAHGNSVGALDDEALFYLRQRGVREEAARE 362
Query: 455 LIVNGFVREVLQKLPME 471
L++ F EVL ++ E
Sbjct: 363 LLIGAFAGEVLNRIEDE 379
>gi|299472231|emb|CBN77201.1| FeS assembly protein SufD [Ectocarpus siliculosus]
Length = 524
Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/391 (16%), Positives = 127/391 (32%), Gaps = 29/391 (7%)
Query: 85 DLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSV 144
+L A P P D++ + E A ++ + V V
Sbjct: 146 ELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETAAAIKPHLLEASQGQQMVFV 205
Query: 145 VTTFKEELKKS---------------GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYA 189
F +EL + P+ +A L +K G +A
Sbjct: 206 NGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYLPEKDADFRTTQGSLAFA 265
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA 249
+LN A F D + + GV + F + ++ G+ +
Sbjct: 266 SLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEEGPTVSHPRLVVKAGADSHVTLTQSY 325
Query: 250 PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS 309
R L ++ D A + + ++ V + S S
Sbjct: 326 LSRGGVCLANGFTRVLVGDRATVTH--------DYAEEMSASDRLVDTVSVDQTTNSTYS 377
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
Q+ +G+ L S ++ A++ Q+ D + + H A+ TT +
Sbjct: 378 VNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQDVHSTIRHKAEGTTCLQEQR 437
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
+ + ++ ++G++ + + A + C +LL+ + +P +E + H A
Sbjct: 438 NVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGA 497
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
T + DE LFY + RGI + I GF
Sbjct: 498 TICDLEDEELFYLMSRGISK------IQMGF 522
>gi|87301371|ref|ZP_01084212.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
gi|87284339|gb|EAQ76292.1| ABC transporter, membrane component [Synechococcus sp. WH 5701]
Length = 417
Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 69/171 (40%)
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
F+ + + RS++ G A++ P + ++ ++ +++G Q D+ +
Sbjct: 226 FLGQLAVEQEPRSQLESVWASHGWALSRFEPRVVQVDGEATTSLKALQLADGQQLADTHS 285
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++ + K I+ + + G V V R A + +LL+ N T
Sbjct: 286 RVEFRGPEGQLDQLHKAIADDRGRSVFNGAVKVPRAAQRTNASQLSRNLLLSNQARIDTK 345
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
P +E H AT S++ + LFY RG+ A L+ GF EV
Sbjct: 346 PELEIVADDVRCAHGATVSRLQTDELFYLQSRGLSAAVAAGLLKRGFCEEV 396
>gi|298347007|ref|YP_003719694.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 43063]
gi|304389286|ref|ZP_07371251.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|298237068|gb|ADI68200.1| FeS assembly protein SufD [Mobiluncus curtisii ATCC 43063]
gi|304327404|gb|EFL94637.1| FeS assembly protein SufD [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 389
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 93/267 (34%), Gaps = 21/267 (7%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+GT I A++ S + + +E+ A A++ ++Q W
Sbjct: 130 TAEGTDTVGHVRIHAEKNSQATIVLRHRGGGSL-----NETLEVKAEPGAKLNVVSLQAW 184
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ + + + + G L E+S +
Sbjct: 185 DATAVH--------MATQQLTLSENASVKHANVTLGGDSVRIAMGVNLPAERSDLNLLGL 236
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQC 399
+N Q + + H + + SR+ KG G + + G V + A + ++
Sbjct: 237 YFTNSEQHQEHRLFIEHKGQKSKSRVTYKGALQGQDAHAVWVGDVGIGPQAFGTDSYELN 296
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
+L++G ++P +E N H + T + DE LFY RGI A L+V
Sbjct: 297 RNLVLGKGPRVDSVPNLEIHNGEIEGAGHASATGRFDDEQLFYLQSRGIDAVNAKRLVVR 356
Query: 459 GFVREVLQKLPMEFAVEAQKLIDISLE 485
F E+L L E +L D LE
Sbjct: 357 AFYAELLNML------EIPELTDYVLE 377
>gi|239617861|ref|YP_002941183.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
gi|239506692|gb|ACR80179.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
Length = 400
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 138/433 (31%), Gaps = 82/433 (18%)
Query: 57 WRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLG 116
++ ++ ++ +K P W R + L+ P++ + + +G
Sbjct: 46 FKRKSFDKYRKLKFPVWKRAKLDGFKL---------PEYPEMTELEINGPKIWKPFNLMG 96
Query: 117 IPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKY 176
E E+L+ G
Sbjct: 97 AEDYE--------------------------LLEKLEFQG-------------------- 110
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
D + L+ + G V G L G +L
Sbjct: 111 -------SDEKFVLLSDTFSSSGVIVRTEPGKYYETPLEVKRY----GKASIASSLFYVS 159
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
GS+++ + + + DNA + +QN Y
Sbjct: 160 RGSFLTLIINNSEEAEFV----SEASRFYIEDNANLNILFLQNDSLRGYNFSNNFYIL-- 213
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G +K+ + ++ Y + G+++ S ++G ID+
Sbjct: 214 ------GENAKLRIYDVLLDGNVSAPYHLVKVIGKRTEVNILSAFFASGGMVIDALYTTR 267
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
+A +T++I G AG S +RG V + +GA +S D +++ IP +
Sbjct: 268 LVAPESTAKIKGIGAVAGGSKVVFRGTVDIKKGAKNSSGDEHSDVIILSKEAIVQAIPSL 327
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME----F 472
+ N H A+ I E ++Y + RG+PEE A+ LIV G VL+K+ E +
Sbjct: 328 LVDENEVNASHAASVGTIDAEKMYYLMSRGLPEEEALKLIVMGSFNPVLEKIADEFGKDY 387
Query: 473 AVEAQKLIDISLE 485
A +I +E
Sbjct: 388 ARRVYDVIQERIE 400
>gi|87125294|ref|ZP_01081140.1| ABC transporter, membrane component [Synechococcus sp. RS9917]
gi|86167063|gb|EAQ68324.1| ABC transporter, membrane component [Synechococcus sp. RS9917]
Length = 388
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 8/212 (3%)
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H+ ++E+ A +++ + D ++ + RS S T + G
Sbjct: 167 HSHLLEVHLGQEATLRHGLI---ACADGHPSLLVH-----CAVEQEPRSSYSLTSVVKGW 218
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
P + + +A+++G QQ+ + + + + + K ++ G S+
Sbjct: 219 TFARLEPRVVQVDGAASTTLRGLAVTSGDQQLATHSAVRFNGPDGGLDQLHKCLAGGRSH 278
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ G + V R A + +LL+ + T P +E H AT S++ D+
Sbjct: 279 AIFNGAIQVPREAQRTDAAQLSRNLLVSDRARIDTKPELEIVADDVRCAHGATVSQLQDD 338
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
LFY RGI A L++ G+ +EV+ +LP
Sbjct: 339 ELFYLQSRGIAAADAAGLLLRGYCQEVVDQLP 370
>gi|218507935|ref|ZP_03505813.1| cysteine desulfurase activator complex subunit SufB [Rhizobium
etli Brasil 5]
Length = 97
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/97 (75%), Positives = 88/97 (90%)
Query: 1 MVAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLL 60
M AV+ET+D+VR IDVDQYKYGFET I++DKAPKGL+EDIIRFISAKK EP+WMLEWRL
Sbjct: 1 MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE 60
Query: 61 AYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVG 97
AYRRWLT+++P+WAR+ YP IDF+D++YYAAPKS G
Sbjct: 61 AYRRWLTLEEPTWARVNYPKIDFNDIHYYAAPKSAPG 97
>gi|289609231|emb|CBI60481.1| unnamed protein product [Sordaria macrospora]
Length = 134
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 67/117 (57%), Positives = 90/117 (76%)
Query: 16 VDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWAR 75
+Y++GF ++I+ D APKGL+ED +R+ISAKKNEP+WML+WRL A+R W TM+ P W++
Sbjct: 13 NKKYEWGFSSDIEQDFAPKGLSEDTVRYISAKKNEPEWMLDWRLKAFRLWQTMEAPDWSK 72
Query: 76 IRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSK 132
+ ID+ D YYYA PK SLD+VDPE+LR YEKLGIPI EQ++LAGV+ S+
Sbjct: 73 LNIDPIDYQDAYYYAEPKKKPTLSSLDEVDPEILRVYEKLGIPIEEQKVLAGVEGSR 129
>gi|114704648|ref|ZP_01437556.1| hypothetical protein FP2506_06926 [Fulvimarina pelagi HTCC2506]
gi|114539433|gb|EAU42553.1| hypothetical protein FP2506_06926 [Fulvimarina pelagi HTCC2506]
Length = 417
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/403 (17%), Positives = 123/403 (30%), Gaps = 45/403 (11%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGI 117
R A P+ + A + DL + DD L + E L
Sbjct: 30 RRPAIEALRREGLPT---RKVEAWHYTDLRQL-----MGKRLGSDDAVEALRESGETLLE 81
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
P+ + + + + A +GV + A L
Sbjct: 82 PLLQGSAVVDLDAPEAAHLP-----------------NGVT--GSASAGEADWKTTPNRL 122
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+ + A+N+A + + + G L G T + E
Sbjct: 123 DRSI----DTVRAMNAAFGAASATIDVAAGTHLDHALEL---RPATGLKSHAFTTVTIGE 175
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ + +E V L A + + Q S +
Sbjct: 176 KAEATIVERLD--GGTTGAPSTGVNMLHVGAGANVLWIVDQEKGLDSSHLG--------Q 225
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
S L G + GE + + + + + Q +D T + H
Sbjct: 226 LSVRLEADSVFRLFVLNAGGGFVRYEVHTDVVGEGADVQIRGVNLLHAGQHVDVTTTLNH 285
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+TT+ + + G + ++G + V RGA + C+SLL+ + P +E
Sbjct: 286 TVAHTTATETFRNVVTGG-HGVFQGIIKVARGAQKTDAKMACNSLLLSDEGDFSAKPELE 344
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
H AT +I +HLFY + RGIP + A AL++ F
Sbjct: 345 IFADDVQCGHGATAGEIDADHLFYLMSRGIPGDQARALLIKAF 387
>gi|315499751|ref|YP_004088554.1| sufbd protein [Asticcacaulis excentricus CB 48]
gi|315417763|gb|ADU14403.1| SufBD protein [Asticcacaulis excentricus CB 48]
Length = 352
Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats.
Identities = 59/355 (16%), Positives = 111/355 (31%), Gaps = 24/355 (6%)
Query: 139 FDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD 198
FD S T EE K + +S A+ E P GD + A
Sbjct: 11 FDPSSYPTRRHEEWK-----YSDLSRALREAPARADLTHMQA-EAGDFGGFYWHCAGDGQ 64
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKG------TGQFERTLIIADEGSYVSYLEGCTAPQR 252
+ + + G I G ++ LE +
Sbjct: 65 LADLQAAVSRAVQSSDGRLYLDMSDVGGEGAVAGYQGEGRIALGAGEHLILLEDYSG--- 121
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+ + V+ + A + + + V + S
Sbjct: 122 ALDYATSTVLHFDLAEGATLIRVVILDEPESAVS--------VRRSTVTTAPGSVFKQYV 173
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
TG+ G + E + + D T++ H + ++ + KG+
Sbjct: 174 FATGAKFQRFETHVEHDGHGAQVEMHGAYLLKDTAHFDYTTRVNHAEVDGATQQLIKGLV 233
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
+ ++G++ V +GA + + +L++ + P +E H T
Sbjct: 234 KDRATAVFQGRIYVEKGADGTDARMRHQALMLNDGAHVRAKPELEIYADDVQCAHGNTIG 293
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ-KLIDISLEG 486
+ + LF+C RG+PEE A AL++ FV V +++ E + I EG
Sbjct: 294 ALDESALFFCQSRGMPEEVARALLMQAFVVPVAEQIEDEALRDMVLNWIADKTEG 348
>gi|289810025|ref|ZP_06540654.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 194
Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 23/196 (11%)
Query: 1 MVAVRETVDKVRKIDVDQ--YKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E ++V + YK GF T + D+ KG++E+++R ISAK+NEPDWMLE+R
Sbjct: 1 MSRNTEATEEVGIWTGGRLNYKEGFFTQLPTDELAKGISEEVVRAISAKRNEPDWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M +P W + Y +++ D YY+AP S
Sbjct: 61 LNAYRAWLDMDEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDSCVSQPGAVQQTGANTFLS 120
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEA 165
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+L + G+IF EA
Sbjct: 121 KEVEDAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEA 172
Query: 166 ICEHPDLVKKYLSTVV 181
I +HPDLV+KYL TVV
Sbjct: 173 IHDHPDLVRKYLGTVV 188
>gi|154149806|ref|YP_001403424.1| SufBD protein [Candidatus Methanoregula boonei 6A8]
gi|153998358|gb|ABS54781.1| SufBD protein [Methanoregula boonei 6A8]
Length = 371
Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats.
Identities = 72/363 (19%), Positives = 143/363 (39%), Gaps = 19/363 (5%)
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q + ++ D V + ++E G+ + +A+ E +K +L V
Sbjct: 20 QSGIDFDLENRCGSYLQVDQNIVESECRQE----GIEVLSFKKAM-EKHAWLKDFLWKAV 74
Query: 182 PVGDNFYAALNSAVFT-DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
+ + G + KG + + + + + T Q +IIA+EG+
Sbjct: 75 SKDKDEITQYVAEQPDPKGYVIIAHKGSKNILPIQACLYLGRE-TIQHVHNIIIAEEGAE 133
Query: 241 VSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ + GC + H V E +A+I ++ + W + F
Sbjct: 134 LHMISGCASSGNIGEGAKHYGVSEFYIKKDAKISFTMIHTWNE-------NVEVFPRSAS 186
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+S YP+ L+GE S F +I +++ ID G++ +
Sbjct: 187 IVEENGVFLSNYVCMQPVKKVQMYPTATLKGENSVARFSTITVASPLSYIDVGSRAILEG 246
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
K ++ ++++ I+ G + + RG + A +R +C L++ N + IP I+ +
Sbjct: 247 KGASAELITRAITKGGTIIS-RG--QIIGKTAGTRGHLECKGLIL-KNGTIYAIPEIDGR 302
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
L HEA K++ + + Y + RG+ E+ A A I+ GF+ + LP +
Sbjct: 303 VVGTELSHEAAVGKLAQDEIEYLMSRGLSEDEATATIIRGFLDVKIAGLPETLQKQIDAT 362
Query: 480 IDI 482
ID+
Sbjct: 363 IDV 365
>gi|330814301|ref|YP_004358540.1| iron-sulfur cluster assembly protein SufD [Candidatus Pelagibacter
sp. IMCC9063]
gi|327487396|gb|AEA81801.1| iron-sulfur cluster assembly protein SufD [Candidatus Pelagibacter
sp. IMCC9063]
Length = 416
Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats.
Identities = 65/420 (15%), Positives = 132/420 (31%), Gaps = 50/420 (11%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAP--KSIVGPQSLDDVDPELLRTYE 113
E+R ++ +LT P + + L G + + EL Y+
Sbjct: 26 EFRKKSFNHFLTNGFPK---AKDEQWKYSPLTKDLNKFLSVEFGKSAEQNFPEELKENYD 82
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
I + + + ++++G+ + + +
Sbjct: 83 HYPIIFIDGNLQL-----------------------DNVQENGLKIVKNEKFLK------ 113
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY--FRINEKGTGQFERT 231
+V G N +A +G + + + Y + N + +
Sbjct: 114 -----SVKKEGTNPVLNFTNAFADEGYLIEVEPNTAISKPIVVYNFYSNNFSSSFVSAKN 168
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
I+ +E S ++ E E + + E+ N+++K V + I
Sbjct: 169 FILINESSEITIFEKNIYNSDQEYLITS-NTEVFLAKNSKLKKYNV-----NEENKHSTI 222
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
+NF S++ L G+ S I +
Sbjct: 223 FNFT---KANLDEGSELEHFTFSKNINSCRDETIVNLNGKNSFASVSGIQSLLDNNNHEI 279
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ H + T S K S ++GK+ V A + + +LL+ +
Sbjct: 280 KLIINHNEEFTESSQFIKSALHDSSTAAFQGKIFVDSQAQKTDGYQLSRALLLSDKARFF 339
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H +++ I E +FY RGI E A +++ GF+ EV+ KL +
Sbjct: 340 SKPELEIYADDVKCSHGSSSGSIDSESIFYLRSRGIDETDAKEMMIKGFLAEVIDKLKDD 399
>gi|124024848|ref|YP_001013964.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
gi|123959916|gb|ABM74699.1| ABC transporter, membrane component [Prochlorococcus marinus str.
NATL1A]
Length = 412
Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats.
Identities = 68/408 (16%), Positives = 139/408 (34%), Gaps = 44/408 (10%)
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
L PS + +F+ L + + +I+ + + V PE E++ I E
Sbjct: 30 EFLLEKGMPSKKDEAWRLSNFNKLNSFLSLPTIIDSKGIKSVFPEKDENRERIIINPNEN 89
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
IL + G+ + E +++K
Sbjct: 90 PILNINLPN------------------------GIEELNKKEIEENLGEIIKST------ 119
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELST-YFRINEKGTGQFERTLIIADEGSYV 241
N ++ + S + V+ S + + R + +EG+ +
Sbjct: 120 ---NIKNDISVCLNQASSLEVLALKVKRNHNHSLELVIPSIEEKSISTRIFFLIEEGAKL 176
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
L+ N ++E+ AE + + G+ + I
Sbjct: 177 DLLQIFLG---KNNSAQNHLIEIKLEAQAEFTHGFI---SLGEEKESSSICTLA----VD 226
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ +SK S + G P + ++ + ++ +QI + + + N
Sbjct: 227 QSEKSKYSLHSIHHGWDYARFEPRIIQSEGEASTTIKGLQVTKSKEQIATHSLIRFEGPN 286
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
+ K +++ +S+ + G + V + A + +LL+ T P +E
Sbjct: 287 GKLDQLQKAVASEYSHCIFNGSIEVPQKAQKTEAAQLSRNLLLSKRARIDTKPELEIVAD 346
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H AT S++ DE LFY L RGI ++ A +L++ G+ EV+ P
Sbjct: 347 DVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQGYYDEVISHFP 394
>gi|307128680|ref|YP_003880710.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
CARI]
gi|306483142|gb|ADM90012.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
CARI]
Length = 434
Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 119/302 (39%), Gaps = 15/302 (4%)
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGV--RCPMELSTYFRINEKGTG 226
++KY + DN N DG+++YIP G+ + + + + I +
Sbjct: 115 CNSNIEKYYGKTLSNNDN-LNYFNFIFSKDGAYIYIPDGIYFKKNIYIIYIYNIINDYSI 173
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R LII + + +E ++ L +V E+ + + Y +QN
Sbjct: 174 INPRNLIILGKKTKAKIIE-IHESLTNKIFLSNSVTEIFNEKKSYLDYIKIQNNLSFSYL 232
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG- 345
F+T++ S S + + G+ S + I
Sbjct: 233 KDN---TFLTQKN-----NSYCSINTFSFEGRLLNNNLNFFNCGKNSKFYLNGLTIIKNK 284
Query: 346 --FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q ID+ + HL N S K I G S + G + VH+ A + F + D++L
Sbjct: 285 SLNQIIDNKILINHLYPNCESNQTYKYILNGRSKGIFNGIIKVHKNANNINAFQKNDNIL 344
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
I N +T P ++ ++ H T KI +E +FY RGI ++ A ++++ F +E
Sbjct: 345 ISNKSFIYTKPELKIYANNVKCTHGCTIGKIDNEKIFYFRSRGIKKKIAKSILLFLFSKE 404
Query: 464 VL 465
+L
Sbjct: 405 IL 406
>gi|16126104|ref|NP_420668.1| hypothetical protein CC_1861 [Caulobacter crescentus CB15]
gi|221234874|ref|YP_002517310.1| SufD protein [Caulobacter crescentus NA1000]
gi|13423304|gb|AAK23836.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964046|gb|ACL95402.1| SufD protein [Caulobacter crescentus NA1000]
Length = 342
Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 92/259 (35%), Gaps = 10/259 (3%)
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F Q +I+ G + LE R + +++ + A ++ +
Sbjct: 81 FVALSDKAAQGASHVIVVKPGESLVLLESHE--GRAGAYVSDVALDIAVGEGASLERIVL 138
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+ V +K + T L G+ G +
Sbjct: 139 VDDDAEAVN--------VVTAEVTLAPGAKFAQTVLTGGARRQRIETRVRHPGAHAEVRL 190
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
+ + + D + + H + + ++KG+ + ++G++ V +GA +
Sbjct: 191 DGAYLLDAQRHADLTSVVTHGGLDGVTSQLTKGMVTDQARGVFQGRIVVEKGADQTDARM 250
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+L++ + P + + H T + DE LFY QRGIPE A A++
Sbjct: 251 GHHALILSDKAEIDAKPELLIFADDVSCAHGNTIGALDDEVLFYAKQRGIPEAEAKAMLT 310
Query: 458 NGFVREVLQKLPMEFAVEA 476
FV EV++++ E A E
Sbjct: 311 VAFVGEVIERIAHEGAREL 329
>gi|191638176|ref|YP_001987342.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
casei BL23]
gi|239631721|ref|ZP_04674752.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|190712478|emb|CAQ66484.1| Conserved protein involved in Fe/S cluster assembly [Lactobacillus
casei BL23]
gi|239526186|gb|EEQ65187.1| fe-S cluster assembly ABC-type transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 346
Score = 163 bits (413), Expect = 6e-38, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 96/266 (36%), Gaps = 25/266 (9%)
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN-WYPG--------------DS 285
++ G + ++ + A++ T+Q W G D+
Sbjct: 79 AHFVSGDEPIVLTGPKQAGGLLYVHVGKGAKV---TIQEKWASGGNVLGVWLVLVIDADA 135
Query: 286 QGKGGIY------NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
+ Y + R G +K++WT L G+ +
Sbjct: 136 EVSWLSYDSFTAETVIANRTATLGANAKLNWTLAGFSRNSGLNRVDVRLLGQNAEATVNV 195
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
++ G Q + T + + A++T I +G+ G ++ + G + +GA S +
Sbjct: 196 GVLAAGSQHVSYTTSVTNEAQHTVGHINQRGVITGSAHLLFNGIGHIIKGARGSDAQQEN 255
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
L++ + P + + H A+ ++++ + L+Y + RG+ A L++ G
Sbjct: 256 RVLMLSPHAEGDANPILLIDENDVTAGHAASVTRVNADQLYYLMSRGLSATLAKRLVIRG 315
Query: 460 FVREVLQKLPM-EFAVEAQKLIDISL 484
F+ L ++ E ID +L
Sbjct: 316 FLEGGLAEIDDVRLKKELFATIDRTL 341
>gi|116494676|ref|YP_806410.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei ATCC 334]
gi|227535339|ref|ZP_03965388.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|301066237|ref|YP_003788260.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus casei
str. Zhang]
gi|116104826|gb|ABJ69968.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei ATCC 334]
gi|227187073|gb|EEI67140.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|300438644|gb|ADK18410.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus casei str. Zhang]
gi|327382207|gb|AEA53683.1| YurX [Lactobacillus casei LC2W]
gi|327385404|gb|AEA56878.1| YurX [Lactobacillus casei BD-II]
Length = 343
Score = 163 bits (413), Expect = 6e-38, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 96/266 (36%), Gaps = 25/266 (9%)
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN-WYPG--------------DS 285
++ G + ++ + A++ T+Q W G D+
Sbjct: 76 AHFVSGDEPIVLTGPKQAGGLLYVHVGKGAKV---TIQEKWASGGNVLGVWLVLVIDADA 132
Query: 286 QGKGGIY------NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYS 339
+ Y + R G +K++WT L G+ +
Sbjct: 133 EVSWLSYDSFTAETVIANRTATLGANAKLNWTLAGFSRNSGLNRVDVRLLGQNAEATVNV 192
Query: 340 IAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQC 399
++ G Q + T + + A++T I +G+ G ++ + G + +GA S +
Sbjct: 193 GVLAAGSQHVSYTTSVTNEAQHTVGHINQRGVITGSAHLLFNGIGHIIKGARGSDAQQEN 252
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
L++ + P + + H A+ ++++ + L+Y + RG+ A L++ G
Sbjct: 253 RVLMLSPHAEGDANPILLIDENDVTAGHAASVTRVNADQLYYLMSRGLSATLAKRLVIRG 312
Query: 460 FVREVLQKLPM-EFAVEAQKLIDISL 484
F+ L ++ E ID +L
Sbjct: 313 FLEGGLAEIDDVRLKKELFATIDRTL 338
>gi|307103250|gb|EFN51512.1| hypothetical protein CHLNCDRAFT_59225 [Chlorella variabilis]
Length = 495
Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats.
Identities = 84/435 (19%), Positives = 135/435 (31%), Gaps = 64/435 (14%)
Query: 59 LLA--YRRWLTMKDPSWARIRYPAIDFDDLYYYAA-PKSIVGPQSLDDVDPELLRTYEKL 115
L A T++ P+ Y D L ++ P + P + L +
Sbjct: 76 LQASCLSALATLRMPTTRNEEYRFTDLRSLLQHSLGPTAGAAPDAAVRAACSLKQ----- 130
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
A V D V +GV + A D+V
Sbjct: 131 ---------------VAAATVVVADGVIDQQQSSIRDLPAGVYVGGLVGA---PQDIVSL 172
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-------F 228
L +A LN A D V++P P + + +
Sbjct: 173 ALGAQSRSRGGPFATLNGAAAQDVVVVHVPASTVMPGPIHVLYLASSAAAASGGRAPVAM 232
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDE--------------NQLHAAVVELVALDNAEIKY 274
R L + ++G+ +E P N AV E D+A +K+
Sbjct: 233 PRLLAVLEKGAVADIVEEFAGPAAAAPLAPADAKTADSSLNYFTDAVAEFELDDSAVLKH 292
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
S VQ G + K + N +G +S S T+ G ++ + GE +
Sbjct: 293 SYVQLESTGVAHMKATLVN--------QGRKSSYSLTEARVGGTLSRHDLNIEQLGEGTH 344
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHS 393
E S + Q D +K+ N + + K I + + G V V+R A +
Sbjct: 345 SEMRSFLLCGDGQLHDLHSKLTLDHPNGEANQLHKCIVSSPTGRGVFDGNVRVNRLAQKT 404
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+LL+ H T S + +E LFY RG+ A
Sbjct: 405 DAQQLSRNLLLVPRAT--------IIADDVKCTHGCTVSDLEEEELFYLRARGVTANVAR 456
Query: 454 ALIVNGFVREVLQKL 468
++V F EV+Q L
Sbjct: 457 QMLVYSFGLEVVQGL 471
>gi|33864857|ref|NP_896416.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
gi|33632380|emb|CAE06836.1| ABC transporter, membrane component [Synechococcus sp. WH 8102]
Length = 392
Score = 163 bits (412), Expect = 7e-38, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 13/257 (5%)
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R +++ +E + + L+ Q D H+ V+E+ A++++ + S
Sbjct: 146 RIVLLVEEKASLDLLQ---VLQSDGASAHSHVLEVHLGQEAQLRHGLLATADGQAS---- 198
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
+ + RS+ ++T + G + P + Q+ E +A+S QQ+
Sbjct: 199 ----LLAHLAVEQEPRSRYAFTSVVQGWDLARVEPRVVQVDGQATTELKGLAVSQADQQL 254
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ T + + K ++ G S+ + G + V R A + +LL+
Sbjct: 255 ATHTAVRFDGPEGELDQLQKCLAGGRSHAIFNGAIQVPRDAQRTNAAQLSRNLLLSERAR 314
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
T P +E H AT S++ ++ LFY RGI A AL++ G +EV++ LP
Sbjct: 315 VDTKPELEIVADDVRCAHGATVSQLQEDELFYLQSRGIAAADAAALLLRGACQEVIEHLP 374
Query: 470 MEFAVEAQKLIDISLEG 486
+ EA ++ + G
Sbjct: 375 --ASAEAWGPLERVMAG 389
>gi|33860631|ref|NP_892192.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633573|emb|CAE18530.1| ABC transporter, membrane component [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 405
Score = 163 bits (412), Expect = 8e-38, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 104/289 (35%), Gaps = 12/289 (4%)
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
D++ LN ++ + + + + + F + + + ++ ++ S V
Sbjct: 114 DQNDHWSDLLNHSLSSKANILGLNISGN-KIPPLEIFSASSPDSFNAKTLILFFEKNSKV 172
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
++ ++N + L +N + + V N +
Sbjct: 173 DLIQ---INLGNKNSSLSQSTYLCLEENTSVNHGLVSYGESKS--------NLLNSLNVI 221
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKN 361
+ S+ S L + I I+ QI + TKM N
Sbjct: 222 QKTNSEYSLGSLHFKFDYARFEIRINQLEGNAKTNLKGIQITKNNDQIATYTKMQFNGPN 281
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
++K ++ S+ + G + V + A + +LL+ + T P +E
Sbjct: 282 GFLDQINKSLADDKSHAVFEGSIIVPKIAQKTDASQLSRNLLLSRHAKIDTKPQLEIIAD 341
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+H AT S++++E LFY RG+ A L ++ +++EV+ +P+
Sbjct: 342 DVKCKHGATISQLNEEELFYMRSRGLTLAEASKLQLSSYIQEVISSIPI 390
>gi|217977769|ref|YP_002361916.1| FeS assembly protein SufD [Methylocella silvestris BL2]
gi|217503145|gb|ACK50554.1| FeS assembly protein SufD [Methylocella silvestris BL2]
Length = 448
Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats.
Identities = 70/398 (17%), Positives = 127/398 (31%), Gaps = 37/398 (9%)
Query: 55 LEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEK 114
+ R A+ ++ P R A + DL L+RT
Sbjct: 34 RKLREAAFSKFYDAGLP---HRRIEAWHYTDLR-------------------ALMRTAAP 71
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS---GVIFMPISEAICEHPD 171
L P E LA ++ A V V F EL GV+ ++ +
Sbjct: 72 LAEPAS-AEALAALREKLAASAPGQRLVVVDGVFVAELSDPAPEGVVIQSLASVLAAGRP 130
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-EKGTGQFER 230
+ L+ G + +LN+A+ DG + + G + + + + R
Sbjct: 131 DLIALLAAQDFGGTDTIVSLNAALMQDGVVIEVAPGAVVAEPIRIVYASTASEPRASYAR 190
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
+ +I G+ V +E Q + + D+A + G G
Sbjct: 191 SALIVGAGASVRLIEDDFGAQ---AAQTNRCLVVSVADDAACDHIV-------SMTGMGR 240
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+ G R K L + + G S G +++ G + D
Sbjct: 241 ASLRIESMIVRLGARVKFKSFGLIGDGGVVRRQIFMRFDGADSEGLLSGVSLLRGREHAD 300
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ + H R K + + ++GK++V + A + +LL+ +
Sbjct: 301 TTLLVEHAGTGCAGRETFKYVLDEEAVGVFQGKITVEKEAQKTDGRMMSKALLLSDGVAM 360
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
+ P +E H AT + + LFY RG+P
Sbjct: 361 NNKPELEIFADDVACGHGATCGGLDENQLFYLQTRGLP 398
>gi|16081354|ref|NP_393682.1| hypothetical protein Ta0204 [Thermoplasma acidophilum DSM 1728]
gi|10639348|emb|CAC11350.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 394
Score = 162 bits (411), Expect = 9e-38, Method: Composition-based stats.
Identities = 87/405 (21%), Positives = 149/405 (36%), Gaps = 21/405 (5%)
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
R ++ + PQ+ + + Y + E+ +L + S
Sbjct: 4 DRGYDRLHEYRQENFIQF----MKTPPQTWKESPTRMR--YVEFTDEFVEKMVLGKQEAS 57
Query: 132 KVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAAL 191
+ V++V G+I I +A HP ++ + + Y L
Sbjct: 58 NGDYRRSDEDVAIVNGRVHVYDTKGLIVSSIRDAEETHPSILYDFAGK--EYVYDRYEFL 115
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+A F DG F+Y+PKGV + + Y + + +II DEGS ++ +
Sbjct: 116 INAGFHDGLFLYVPKGVSASINIEDY---ASSTSSFAAKNMIIVDEGSKINVFRRISGSG 172
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
N + NA I+Y+ VQ+ P +G I F S
Sbjct: 173 -TGNGYQGDNTYIFLGKNASIEYNQVQD-RPKTVEGLQFIRTF-------MDDYSSARIY 223
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
E G + G + + ++ + QQ+D + + +T + I +GI
Sbjct: 224 HAENGYDRSIIVTESYQYGNGTNYQVRGVSFTRSLQQMDLRDNTIQIGTHTVADIYIRGI 283
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S RG + + A H+ + LL+ + A+T P + N+ +H +
Sbjct: 284 VRDRSLTMQRGNIDIREQARHAEGYYDTRILLLSKDAFANTKPALLINNNDVRSKHASAI 343
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
S I D LFY RGI E+ A +IV GF V++ E EA
Sbjct: 344 SNIDDISLFYLRSRGIDEDTAKNMIVEGFTEHVVEG-SDERLKEA 387
>gi|78213790|ref|YP_382569.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. CC9605]
gi|78198249|gb|ABB36014.1| ABC transporter, membrane component [Synechococcus sp. CC9605]
Length = 392
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 10/228 (4%)
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H+ V+E+ A++++ + G+ + + + RS + T + G
Sbjct: 171 HSHVLEVHLGQEAQLRHGVLAT--------ADGVSSLMAHLAVEQEPRSSYALTSVVQGW 222
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ P + Q+ +A++ QQ+ + T + + K ++ G S+
Sbjct: 223 NLGRVEPRVVQVDGQAETVLKGLAVTGAKQQLATHTAVRFDGPEGELDQLQKCLAGGQSH 282
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ G +SV R A + +LL+ T P +E H AT S++ D+
Sbjct: 283 AIFNGAISVPRDAQRTNAAQLSRNLLLSGRARVDTKPELEIVADDVRCAHGATVSQLQDD 342
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
LFY RGI A AL++ G +EV+ +LP A +A + ++ +E
Sbjct: 343 ELFYLQSRGIAAADATALLLRGACQEVIAQLP--AAAQAWRPLERVME 388
>gi|229551996|ref|ZP_04440721.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus rhamnosus
LMS2-1]
gi|258539410|ref|YP_003173909.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus
rhamnosus Lc 705]
gi|229314645|gb|EEN80618.1| Fe-S cluster assembly ABC superfamily ATP binding cassette
transporter, permease protein [Lactobacillus rhamnosus
LMS2-1]
gi|257151086|emb|CAR90058.1| ABC transporter, Fe-S cluster assembly transporter permease
component [Lactobacillus rhamnosus Lc 705]
Length = 343
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 96/253 (37%), Gaps = 14/253 (5%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ +G+ V+ E + + LV +A++ NW DS +
Sbjct: 99 VHVGKGANVTVQEKWASGGHVLGIW----LMLVIEADAQV------NWLSYDSFSADTV- 147
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ R +K++WT L G+ + +++G Q +
Sbjct: 148 --LVNRTATLADNAKLNWTLAGFSHNSGLNRVDVRLLGQNAEATVNVGVLASGSQHVSYT 205
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + + ++T I +G+ G ++ + G + +GA S + L++
Sbjct: 206 TSVTNEGQHTVGHINQRGVITGSAHLLFNGIGHIVKGARGSDAQQENRVLMLSPRAEGDA 265
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME- 471
P + + H A+ ++++ + L+Y + RG+ A L++ GF+ L ++ +
Sbjct: 266 NPILLIDENDVTAGHAASVTRVNADQLYYLMSRGLSATLAKRLVIRGFLEGGLAEIDDQR 325
Query: 472 FAVEAQKLIDISL 484
E ID +L
Sbjct: 326 LKKELFATIDRTL 338
>gi|72383270|ref|YP_292625.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus str. NATL2A]
gi|72003120|gb|AAZ58922.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Prochlorococcus marinus str. NATL2A]
Length = 412
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/407 (16%), Positives = 143/407 (35%), Gaps = 42/407 (10%)
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
L PS + +F+ L + + +I+ + + V PE + E++ I E
Sbjct: 30 EFLLEKGMPSKKDEAWRLSNFNKLNSFLSLPTIIDSKGIKSVFPEKDKNRERIIINPNEN 89
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP 182
IL +G+ + E +++K
Sbjct: 90 PILNINLP------------------------NGIEELNKKEIEENLGEIIKST-----N 120
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS 242
+ ++ LN A D + + + +E+ + R + +EG+ +
Sbjct: 121 IKNDISVCLNQASSLDILALKVKRNHNHSLEIVIPSI---EEKSISTRIFFLIEEGAKLD 177
Query: 243 YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
L+ N ++E+ AE + + G+ + I +
Sbjct: 178 LLQIFLG---KNNSAQNHLIEIKLEAEAEFTHGFI---SLGEEKESSSICTLA----VDQ 227
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+SK S + G P + ++ + ++ +QI + + + N
Sbjct: 228 SEKSKYSLHSIHHGWDYARFEPRIIQSEGEASTIIKGLQVTKSKEQIATHSLIRFEGPNG 287
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+ K +++ +S+ + G + V + A + +LL+ T P +E
Sbjct: 288 KLDQLQKAVASEYSHCIFNGSIEVPQKAQKTEAAQLSRNLLLSKRARIDTKPELEIVADD 347
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H AT S++ DE LFY L RGI ++ A +L++ G+ EV+ P
Sbjct: 348 VRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQGYYDEVISHFP 394
>gi|293977907|ref|YP_003543337.1| Fe-S cluster assembly ABC transporter permease [Candidatus Sulcia
muelleri DMIN]
gi|292667838|gb|ADE35473.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Candidatus Sulcia muelleri DMIN]
Length = 433
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/305 (19%), Positives = 111/305 (36%), Gaps = 15/305 (4%)
Query: 169 HPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGV--RCPMELSTYFRINEKGTG 226
++K+ + D N DG++++IP + + + + + IN +
Sbjct: 114 CNSNIEKFYGKSISNND-TLNLFNFFFSKDGAYIFIPDNICFKPNIYIIYIYNINYDYSI 172
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R LII S +E + +V E+ N+ I Y + N
Sbjct: 173 INPRNLIIIGNNSKAKIVERHESLTNKI-FFSNSVTEIYTRKNSSIDYMKIHN------- 224
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG- 345
+ K + S S + + + G S + I
Sbjct: 225 -NLSFFYLRDKTFLTQKKNSTCSISTFSFEGRLLINNIKLINLGNYSNFNLNGLTIIKKK 283
Query: 346 --FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+ I + T + HL S K I G S + GK+ +H+ A + + +++L
Sbjct: 284 SLNKLIYNKTLIDHLYPTCESYQTYKSILYGRSKVFFWGKIKIHKKANNINALQKANNIL 343
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
I N +T P +E + H T +I +FY RG+ + A ++++ F +E
Sbjct: 344 INKNAFVYTKPELEIYTDNVKCSHGCTIGQIDKNKIFYLRSRGVIKTVAKSILIFLFSKE 403
Query: 464 VLQKL 468
+L+K+
Sbjct: 404 ILKKI 408
>gi|199597561|ref|ZP_03210990.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|258508195|ref|YP_003170946.1| Fe-S cluster assembly ABC transporter permease [Lactobacillus
rhamnosus GG]
gi|199591584|gb|EDY99661.1| Fe-S cluster assembly ABC-type transport system, permease component
[Lactobacillus rhamnosus HN001]
gi|257148122|emb|CAR87095.1| ABC transporter, Fe-S cluster assembly transporter permease
component [Lactobacillus rhamnosus GG]
gi|259649512|dbj|BAI41674.1| Fe-S cluster assembly ABC transporter permease component
[Lactobacillus rhamnosus GG]
Length = 343
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 97/253 (38%), Gaps = 14/253 (5%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ +G+ V+ E + + LV +A++ NW DS +
Sbjct: 99 VHVGKGANVTVQEKWASGGHVLGIW----LMLVIEADAQV------NWLSYDSFSADTV- 147
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ R +K++WT L G+ + +++G Q++
Sbjct: 148 --LVNRTATLADNAKLNWTLAGFSHNSGLNRVDVRLLGQNAEATVNVGVLASGSQRVSYT 205
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
T + + ++T I +G+ G ++ + G + +GA S + L++
Sbjct: 206 TSVTNEGQHTVGHINQRGVITGSAHLLFNGIGHIVKGARGSDAQQENRVLMLSPRAEGDA 265
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME- 471
P + + H A+ ++++ + L+Y + RG+ A L++ GF+ L ++ +
Sbjct: 266 NPILLIDENDVTAGHAASVTRVNADQLYYLMSRGLSATLAKRLVIRGFLEGGLAEIDDQR 325
Query: 472 FAVEAQKLIDISL 484
E ID +L
Sbjct: 326 LKKELFATIDRTL 338
>gi|161833796|ref|YP_001597992.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
GWSS]
gi|152206286|gb|ABS30596.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
GWSS]
Length = 433
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/385 (18%), Positives = 135/385 (35%), Gaps = 19/385 (4%)
Query: 89 YAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTF 148
++ + +D ++ E + I Q IL ++ + V F
Sbjct: 38 FSLKYEKIKSSIIDYEYLFPVKEAEYIYYDIINQYILDKNGMYLFFINGFY----VFNFF 93
Query: 149 KEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGV 208
K+ K I I ++K+ + D N DG++++IP +
Sbjct: 94 KKNKKYLLSINDIIINNKNYCNSNIEKFYGKSISNND-TLNLFNFLFSKDGAYIFIPDNI 152
Query: 209 --RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
+ + + + IN + R LII S +E ++ +V E+
Sbjct: 153 CFKPNIYIIYIYNINYDYSIINPRNLIIIGNNSKAQIVE-IHESLTNKICFSNSVTEIYT 211
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
N+ I Y + N + K + S S + +
Sbjct: 212 RKNSSIDYIKIHN--------NLSFFYLRDKTFLTQKKNSTCSISTFSFEGRLLINNIKL 263
Query: 327 LLRGEQSCGEFYSIAISNG---FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
+ G S + I + I + T + HL S K I G S + GK
Sbjct: 264 INLGNYSNFNLNGLTIIKKKSLNKLIYNKTLIDHLYPTCESYQTYKSILYGRSKVFFWGK 323
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ +H+ A + + +++LI N +T P +E + H T +I +FY
Sbjct: 324 IKIHKKANNINALQKANNILINKNAFFYTKPELEISTDNVKCSHGCTIGQIDKNKIFYLR 383
Query: 444 QRGIPEEAAIALIVNGFVREVLQKL 468
RG+ + A ++++ F +E+L+K+
Sbjct: 384 SRGVIKTVAKSILIFLFSKEILKKI 408
>gi|157412422|ref|YP_001483288.1| ABC transporter membrane component [Prochlorococcus marinus str.
MIT 9215]
gi|157386997|gb|ABV49702.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9215]
Length = 405
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 92/259 (35%), Gaps = 11/259 (4%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ F + + +I ++ + L+ +N + +N+
Sbjct: 143 IPPIEIFSHASSNSLNAKTLVIFLEKNCEIELLQ---VNLGKKNSSLSQSTFFCLEENSC 199
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ + + N + + S+ + L S
Sbjct: 200 VNHGVI--------SYGENKSNLLNSLNVIQHKNSEYNLGSLHYKFNYARFEISIKQSAG 251
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ + I+ +QI + TK+ N ++K ++ S+ + G + V + A
Sbjct: 252 NAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDKSHAIFEGSIIVPKIAQ 311
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ +LL+ N T P +E +H AT S++++E LFY RGI +
Sbjct: 312 KTDASQLSRNLLLSNFAKIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLQE 371
Query: 452 AIALIVNGFVREVLQKLPM 470
A L ++ + +E++ +P+
Sbjct: 372 ASKLQLSSYFQEIISFIPI 390
>gi|167753461|ref|ZP_02425588.1| hypothetical protein ALIPUT_01735 [Alistipes putredinis DSM 17216]
gi|167658086|gb|EDS02216.1| hypothetical protein ALIPUT_01735 [Alistipes putredinis DSM 17216]
Length = 276
Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 2/179 (1%)
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+ SK T + SA L G ++ E + ++ + H
Sbjct: 88 FQVEQAAGSKFRMTACQFTSANVR--YRFDLNGREASNELDVLFLALEQDHCVVDLRTNH 145
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
L + TSR + KG+++G + G V V A H+ QC ++L+ P +E
Sbjct: 146 LVPDCTSRSLIKGVASGTGRGEFCGLVYVAPDAQHTDAQQQCRNILLSRTSRIDARPQLE 205
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT ++ DE + Y QRG+ EE A L + GF +V+ + +E E
Sbjct: 206 IYADDVRCSHGATVGQMEDEAILYMRQRGLKEEQARRLQIEGFAADVVGRCRIEAVKEI 264
>gi|305662733|ref|YP_003859021.1| SufBD protein [Ignisphaera aggregans DSM 17230]
gi|304377302|gb|ADM27141.1| SufBD protein [Ignisphaera aggregans DSM 17230]
Length = 398
Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/344 (21%), Positives = 146/344 (42%), Gaps = 19/344 (5%)
Query: 126 AGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGD 185
GV S A+ D T +K + GV + I + I +PD ++Y+ +V G
Sbjct: 55 VGVNLSANALYLQVDQ----TYYKYISRIPGVEVLRIEDFIDSNPDEAREYVWKLVDPGI 110
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
+ Y AL + G F+ + + R + I+ KG Q +++ ++G+ +
Sbjct: 111 DKYTALAALRGRGGYFIRVKRNTRVEEPVMACLFISYKGL-QAPHNIVVVEDGAEATVYT 169
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
GC + LH + E NA++++ V +W + + + G
Sbjct: 170 GC-TIAPEVLGLHIGISEFYVGKNAKLRFIMVHSW--------NRVAHVRPRTGVIVDDG 220
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + + T + + G + SI + G +ID GTK +++ +
Sbjct: 221 GEYISYYVNISNVKTLQTFPTIYLGYNARAYSASIILGQGDSEIDVGTKAYLAEESS-AE 279
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
++S+ I+ S R + G R C L+ N TIP +E+++ + L
Sbjct: 280 LISRAIAKDDSRVIMRASIVGRGG----RGHIDCRGLMQSNTANIKTIPELEAESPNALL 335
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
HEA+ ++++E ++Y + +G ++ AI ++V GF+ +LP
Sbjct: 336 THEASIGRLAEEEIYYLMSKGFSKDEAIGILVRGFISVDTSRLP 379
>gi|315304570|ref|ZP_07874817.1| FeS assembly protein SufD [Listeria ivanovii FSL F6-596]
gi|313627060|gb|EFR95946.1| FeS assembly protein SufD [Listeria ivanovii FSL F6-596]
Length = 133
Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++ H K +T I+S G+ + + G + GA+ S + L++
Sbjct: 1 RVTHYGKASTGTILSHGVMKESATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDAN 60
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + + H A+ ++ LFY + RGI ++ A L+++GF+ V++KLP+E
Sbjct: 61 PILLIDENDVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRKLPIES- 119
Query: 474 VEAQKLIDISLEGSV 488
+ ++ +EG V
Sbjct: 120 --VKTMLREVIEGKV 132
>gi|254526988|ref|ZP_05139040.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9202]
gi|221538412|gb|EEE40865.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9202]
Length = 405
Score = 161 bits (406), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 11/259 (4%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ F + + +I ++ + L+ +N + +N+
Sbjct: 143 IPPIEIFSHASSNSLNAKTLVIFLEKNCDIELLQ---VNLGKKNSSLSQSTFFCLEENSC 199
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ + + N + + S+ + L S
Sbjct: 200 VNHGVI--------SYGENKSNLLNSLNVIQHKNSEYNLGSLHYKFNYARFEISIKQSAG 251
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ + I+ +QI + TK+ N ++K ++ S+ + G + V + A
Sbjct: 252 NAKTNIKGMQITKKDEQISTFTKIDFNGPNGFLDQINKSLADDKSHAIFEGSIIVPKIAQ 311
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ +LL+ N T P +E +H AT S++++E LFY RGI +
Sbjct: 312 KTDASQLSRNLLLSNFAKIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLQE 371
Query: 452 AIALIVNGFVREVLQKLPM 470
A L ++ + +EV+ +P+
Sbjct: 372 ASKLQLSSYFQEVISFIPV 390
>gi|330837701|ref|YP_004412342.1| SufBD protein [Spirochaeta coccoides DSM 17374]
gi|329749604|gb|AEC02960.1| SufBD protein [Spirochaeta coccoides DSM 17374]
Length = 366
Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats.
Identities = 64/369 (17%), Positives = 131/369 (35%), Gaps = 16/369 (4%)
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFM-----PISEAICEHPDLVKKYL 177
E L + + F++EL +G + P + + + +
Sbjct: 4 EKLTIHDVNILPRLTYRRMGLNGGDFQDELAVAGSLPKKPVPPPSDDYVIKDSAAFTSQV 63
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+ +GD F A + S+ G F+ + VR + + ++ + T+++A E
Sbjct: 64 AVPSGIGDQFVAHVRSS-ANAGFFIGVKPHVRVTDPIIIPYVVDSSSPAIVDDTVLVAGE 122
Query: 238 GSYVSYLEGCTAPQRDEN-QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
GS V+ ++ + + +A +VA ++ + VQ
Sbjct: 123 GSNVTLVQTIHSAGTPAAARYYAGSTRVVAHPHSHVTIVQVQLLDDQAVSFID------- 175
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G + + + G + L G+ + E ++ + + + +
Sbjct: 176 -CGVHAEEGATVKVVHVLIGGRRMFGGSKAFLAGDDASYELGTMFLGDNERVSEMNYMAT 234
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H K T S +V +G + T++G + GA S+ + SL+ ++P I
Sbjct: 235 HQGKRTHSDLVGRGALLDKAVKTFKGTIDFLPGAVGSKGAEEEFSLMFSPQVRNKSVPLI 294
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-E 475
H +T +I + LFY + RG+ E A L+V ++ +P E E
Sbjct: 295 LCGEEDVEGAHAVSTGRIDVDSLFYLMSRGLDETTARKLLVEAQFEPIIAMIPDENIRDE 354
Query: 476 AQKLIDISL 484
+I L
Sbjct: 355 VSTVIATRL 363
>gi|148243115|ref|YP_001228272.1| SufD protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
gi|147851425|emb|CAK28919.1| SufD protein, Fe-Scluster assembly [Synechococcus sp. RCC307]
Length = 392
Score = 160 bits (404), Expect = 6e-37, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 68/170 (40%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ S S T + G A+ + P L + +A+ +G D + +
Sbjct: 208 IRQQPGSSYSRTAVVQGWALARQEPQLLQCAGGAETCLRDLAVLSGTAIADLHSLVRFDG 267
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ + K + G S++ + G V V R A + LL+ T P +E
Sbjct: 268 PDGRLDQLQKALVDGRSHSIFNGTVQVPRAAQGTDAAQLSRHLLLSEQAWVDTKPELEIV 327
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
H AT S ++DE LFY RGI AA L+ GF EVL +LP
Sbjct: 328 ADDVRCSHGATVSSLADEELFYLRSRGIDRPAATELLRRGFCLEVLNQLP 377
>gi|223996721|ref|XP_002288034.1| hypothetical protein THAPSDRAFT_268364 [Thalassiosira pseudonana
CCMP1335]
gi|220977150|gb|EED95477.1| hypothetical protein THAPSDRAFT_268364 [Thalassiosira pseudonana
CCMP1335]
Length = 295
Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 1/174 (0%)
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGS-AITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+F G + +E G + S L + A+S G Q+ D
Sbjct: 77 THFEAIDVHVIGDEGSYISSVMELGGTGRSRIGISTTLLRPGAMASINGFALSGGAQRSD 136
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
T + H+ + T SR + + G S ++RG++ V + A + + ++L+ ++
Sbjct: 137 MRTNIHHIGQGTVSRQEQRNMVGGRSTASFRGRIRVEQSAQQTDSEQLSRTILLSDHARV 196
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
P +E H AT S +S+E LFY RG+ A +++ FV E+
Sbjct: 197 WATPSLEIIADDVTCTHGATVSDLSEEELFYLRSRGLDRTTARNMLMYAFVEEI 250
>gi|296087515|emb|CBI34104.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 9/208 (4%)
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
+ L A++K+S +Q+ + K +G ++ TG ++
Sbjct: 14 RCIKLFGAKVKHSYIQSQSLSAAHIKWT--------SVQQGSSGSYELIEVSTGGKLSRH 65
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF-SNNTYR 381
+ G + E + +S G D T+++ R + K I A +
Sbjct: 66 NVNIQQVGPDTVTELSAFHLSVGDPTQDLHTRLVLDHPRGYFRQLHKCIVAHSLGQAVFD 125
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + V+R A + SLL+ + P ++ H A S + + LFY
Sbjct: 126 GNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFY 185
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLP 469
L RGI E A ++ F EV+++LP
Sbjct: 186 FLARGIDLETARKTLIFSFGDEVIERLP 213
>gi|254781061|ref|YP_003065474.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040738|gb|ACT57534.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter asiaticus str. psy62]
Length = 428
Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/415 (17%), Positives = 142/415 (34%), Gaps = 49/415 (11%)
Query: 54 MLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYE 113
+ ++R P+ + + DL + L + +
Sbjct: 36 LCDFRTQGL-------LPT---RKIENWHYTDL--------KNILKVLPTNKNSIATLQK 77
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
K + + L+ Q ++ + + + E ++ P+SE
Sbjct: 78 KYKPLVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSE--------- 128
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ +N + DG V IP + + L R I
Sbjct: 129 -----------HDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGGQM--HLRYPI 175
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
S + +E T ++N +++ ++ + A+I + V + D+
Sbjct: 176 SFGMNSRTTVVERYTTLT-NDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLG----- 229
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ +S + L G ++ + S ++GE+S I + +G D
Sbjct: 230 ---QLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSM 286
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H NT S V + I S ++G V V A S ++LL N +
Sbjct: 287 FLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSNEGSFYVK 346
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E H AT S I+ EHL+Y + RGI + A +++ + F+ E+++ L
Sbjct: 347 PELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDL 401
>gi|255023591|ref|ZP_05295577.1| hypothetical protein LmonocyFSL_09455 [Listeria monocytogenes FSL
J1-208]
Length = 126
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
+ I+S G+ + + G + GA+ S + L++ P + +
Sbjct: 2 SNGTILSHGVMKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLIDEN 61
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
H A+ ++ LFY + RGI ++ A L+++GF+ V+++LP+E + ++
Sbjct: 62 DVVAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIES---VKTMLR 118
Query: 482 ISLEGSV 488
+EG V
Sbjct: 119 EVIEGKV 125
>gi|13542220|ref|NP_111908.1| membrane component of an uncharacterized iron-regulated ABC-type
transporter [Thermoplasma volcanium GSS1]
gi|14325654|dbj|BAB60557.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 404
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 14/315 (4%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELS 215
G I PI EA ++P+L+ Y D+ Y L +A F DG VY+P ++
Sbjct: 89 GCIVEPIREAERKYPNLIFDYTDK--ENVDDRYEYLINAGFYDGFLVYLPPNKSSEIKAV 146
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + + + LII EGS +++ + N + N+ I YS
Sbjct: 147 DFAKST---SSFAAKNLIIVGEGSSLNF-TRYIVGGGEGNGAQGDNTYIFLSRNSSIVYS 202
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
VQ+ + K ++ I + +I +G +
Sbjct: 203 QVQDRPKTVDGIQFL------KTFMEDNTQATIHHVENGYNKSIIMTE--SYQKGNFTNY 254
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ ++ + G QQ+D + + ++ + I +GI S +RG + + +
Sbjct: 255 QLRGVSFTRGLQQMDLRDNTIQIGTHSIANIYVRGIVREKSLTMHRGNIDIKESGRKAEG 314
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ LL+ A+T P + N+ +H + + I +E LFY RGI EE A L
Sbjct: 315 YYDTRILLLSKEAYANTKPALLINNNDVKSKHASAVTNIDEESLFYLRSRGIDEETAKNL 374
Query: 456 IVNGFVREVLQKLPM 470
I+ GF V++ P
Sbjct: 375 IIEGFTEHVVEGAPD 389
>gi|88807205|ref|ZP_01122717.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
gi|88788419|gb|EAR19574.1| ABC transporter, membrane component [Synechococcus sp. WH 7805]
Length = 398
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 85/212 (40%), Gaps = 8/212 (3%)
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H+ V+E+ A +++ + G + + + RS + + G
Sbjct: 176 HSHVIEVHLGQEARLRHGLL--------ASASGDTSLLAHLAVEQEPRSSYDFVSVCRGW 227
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
P L Q+ +A++ G +Q + T + + + K ++A S+
Sbjct: 228 RFGRLEPRVLQVDGQATTRLNGLAMTGGDEQFATHTGVCFQGPEGSLDQLQKAVAADRSH 287
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ + G + V R A + +LL+ + P +E H AT S++ +
Sbjct: 288 SIFNGAIQVPRAAQRTDASQLSRNLLLSSQARVDAKPELEIVADDVRCAHGATVSQLQQD 347
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
LFY RG+ + A AL++ G+ +V+ +LP
Sbjct: 348 QLFYLRSRGVAADEAAALLLKGYCCDVVDRLP 379
>gi|197105181|ref|YP_002130558.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
gi|196478601|gb|ACG78129.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Phenylobacterium zucineum HLK1]
Length = 342
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 88/243 (36%), Gaps = 11/243 (4%)
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
+ + EG+ + LE + + A ++ V + +P
Sbjct: 91 AHASQVEVRVGEGATLRLLESHDSDDASLAHTA---FDFHLAAGASVERIVVADDHPEAV 147
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
VT+ + + TG+ G+++ + + G
Sbjct: 148 N--------VTQAEVRITSGGQFAQNVFTTGARRQRLETGVHHPGQKAIVRLDGVYLLEG 199
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
D T + H ++ + ++KG+ + ++G++ V GA + +L++
Sbjct: 200 KAHADLTTIVTHAGRDGRTEQLTKGVVRDQARGVFQGRIVVAEGADGTDARMGHHALIVS 259
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+ P +E + H T + ++ LFY QRGIPE A A++ FV EV+
Sbjct: 260 DRAEVDAKPELEIYADDVSCAHGNTVGALDEDALFYARQRGIPEAEARAMLTEAFVGEVV 319
Query: 466 QKL 468
++
Sbjct: 320 DRV 322
>gi|315122397|ref|YP_004062886.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495799|gb|ADR52398.1| putative iron-sulfur cluster assembly protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 290
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 107/282 (37%), Gaps = 12/282 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
IP + + L + + R I S + +E T+ + L +++ +
Sbjct: 10 IPDECQLDVPLELQSVQRGEQ--RHLRYPISFGVNSKATIIERYTSLTNQPS-LVSSIAD 66
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ A+I + V + D+ + + + + G ++ +
Sbjct: 67 IKVGKGADITWIIVLDQDVEDTHLG--------QLRVVLEQNALLKVFFINMGQGLSRRE 118
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
S + GE+S I + G D + H NT+S + + I S ++G
Sbjct: 119 LSIDVEGEESRFMLRGINLLKGQTHGDLSMFLRHKVPNTSSTSIVRSIVLEKSTGIFQGA 178
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V V + S ++LL N P +E H AT S I+ +HL+Y +
Sbjct: 179 VCVSPESQGSNATMASNTLLFSNEGNFFVKPELEIFADDVQCGHGATVSNINQDHLYYLM 238
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISL 484
R IP+ A +++ + F+ EV+ L E + +KL+ +
Sbjct: 239 TRNIPKNEAYSMLSHAFISEVISDLNDEVLQISIEKLLSSWM 280
>gi|28493303|ref|NP_787464.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
gi|28476344|gb|AAO44433.1| iron regulated ABC transporter membrane component [Tropheryma
whipplei str. Twist]
Length = 384
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 15/244 (6%)
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
T+I + +E++ DNA ++ + Q+W
Sbjct: 127 CTVAHTIIHVKAHADAKLFINNHGYDGLIEN-----LEIILEDNAILQLISCQDWDEASV 181
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
Y+FV G S++ TG P+ L E S E I +
Sbjct: 182 HL---AYHFV-----YFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQN 233
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q + + H A++T S I +G+ +G + G V + A +S ++ Q +L+I
Sbjct: 234 KQHFEHQVYVHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMI 293
Query: 405 GNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
G+ A ++P +E KN + H + T + DEHLFY RGI + A+ ++V+GFV
Sbjct: 294 GSGTRADSVPNLEIKNGNILGAGHASATMRFDDEHLFYLQSRGIDKNQALRMVVSGFVHG 353
Query: 464 VLQK 467
+LQK
Sbjct: 354 MLQK 357
>gi|28572586|ref|NP_789366.1| hypothetical protein TW435 [Tropheryma whipplei TW08/27]
gi|28410718|emb|CAD67104.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
Length = 382
Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 15/244 (6%)
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
T+I + +E++ DNA ++ + Q+W
Sbjct: 125 CTVAHTIIHVKAHADAKLFINNHGYDGLIEN-----LEIILEDNAILQLISCQDWDEASV 179
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
Y+FV G S++ TG P+ L E S E I +
Sbjct: 180 HL---AYHFV-----YFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQN 231
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q + + H A++T S I +G+ +G + G V + A +S ++ Q +L+I
Sbjct: 232 KQHFEHQVYVHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMI 291
Query: 405 GNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
G+ A ++P +E KN + H + T + DEHLFY RGI + A+ ++V+GFV
Sbjct: 292 GSGTRADSVPNLEIKNGNILGAGHASATMRFDDEHLFYLQSRGIDKNQALRMVVSGFVHG 351
Query: 464 VLQK 467
+LQK
Sbjct: 352 MLQK 355
>gi|313632096|gb|EFR99189.1| FeS assembly protein SufD [Listeria seeligeri FSL N1-067]
Length = 124
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
I+S G+ + + G + GA+ S + L++ P + +
Sbjct: 2 GTILSHGVMKESATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPILLIDENDV 61
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
H A+ ++ LFY + RGI ++ A L+++GF+ V++KLP+E + ++
Sbjct: 62 VAGHAASVGRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRKLPIES---VKTMLREV 118
Query: 484 LEGSV 488
+EG V
Sbjct: 119 IEGKV 123
>gi|123965315|ref|YP_001010396.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
gi|123199681|gb|ABM71289.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9515]
Length = 405
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 11/259 (4%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ F + + + ++ D+ S + L+ +EN + +N
Sbjct: 143 IPPIEIFSASSPESFNAKTLILFFDKNSKIDLLQ---INLGNENSSLSQSTYFCLEENTS 199
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ + V N + + +S+ S L +
Sbjct: 200 VNHGVVSYGESKS--------NLLNSLNVIQKAKSEYSLGSLHFKFNYARFEININQLDG 251
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ I I+ QI + T M N ++K ++ S+ + G + V + A
Sbjct: 252 NAKTNIKGIQITKNNDQIATYTNMNFNGPNGFLDQINKSLADDKSHAVFEGSIIVPKIAQ 311
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ +LL+ T P +E +H AT S++++E +FY RG+
Sbjct: 312 KTDASQLSRNLLLSRFAKIDTKPQLEIIADDVKCKHGATISQLNEEEIFYMRSRGLTLAE 371
Query: 452 AIALIVNGFVREVLQKLPM 470
A L ++ +++E++ +P+
Sbjct: 372 ASKLQLSSYIQEIISSIPI 390
>gi|215445653|ref|ZP_03432405.1| hypothetical protein MtubT_06799 [Mycobacterium tuberculosis T85]
Length = 176
Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 16 VDQYKYGF-ETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
+ +Y YG+ ++++ A +GL+E ++R ISAKKNEPDWML+ RL A R + P W
Sbjct: 29 LGRYGYGWADSDVAGANAQRGLSEAVVRDISAKKNEPDWMLQSRLKALRIFDRKPIPKWG 88
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
IDFD++ Y+ DD+ ++ TY++LGIP E++ L
Sbjct: 89 S-NLDGIDFDNIKYFVRSTEKQAAS-WDDLPEDIRNTYDRLGIPEAEKQRLV------AG 140
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHP 170
V A ++S + +E+L+ GVIF+ + EHP
Sbjct: 141 VAAQYESEVIYHQIREDLEAQGVIFLDTDTGLREHP 176
>gi|313157930|gb|EFR57336.1| SufB/sufD domain protein [Alistipes sp. HGB5]
Length = 273
Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 1/163 (0%)
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
+ L G + + ++ G + + H + S KG++ G + + G
Sbjct: 109 YTIDLDGRDAENMLGGVFLAGGEEHCVVKLRTNHNVPDCRSNSYIKGVAGGSARGEFCGL 168
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V V A H+ Q ++L+ T P +E H AT ++ E + Y
Sbjct: 169 VYVAPDAQHTDAQQQNRNILLSETAHIATQPQLEIYADDVKCSHGATVGQMDSEAVLYMR 228
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLE 485
QRG+ E A L + GFV +V+++ +E E + + +E
Sbjct: 229 QRGLSEVQARRLQIEGFVGDVVRRCGVEPLCETMMEAVRAKME 271
>gi|148555824|ref|YP_001263406.1| SufBD protein [Sphingomonas wittichii RW1]
gi|148501014|gb|ABQ69268.1| SufBD protein [Sphingomonas wittichii RW1]
Length = 360
Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats.
Identities = 50/292 (17%), Positives = 97/292 (33%), Gaps = 16/292 (5%)
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
DG + + K P + G I+ E + S +E +
Sbjct: 84 DGWTLALHKDGAAPAGAIEIVHVATGGASHVP-ARIVMAEDAQASIVE-----TYVGDGW 137
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
+ + +A + G + + G + + T L G+
Sbjct: 138 ANRLTRIELGRSARL-------MRAIRLVQGSGFTSL--RDEAVLGAGASLVTTILGAGA 188
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ L G + E ++ Q+ D+ + H TSR + + ++ +
Sbjct: 189 GGSRLDAFITLDGVGAYAEHGGALLARDSQRHDAAVVVRHAEPEGTSRQLWRAVADDQAT 248
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ +V V R A + L++ + P +E H AT ++ +
Sbjct: 249 TSMAARVEVARDAQKTDGEQSLRGLMLKRTATVNLKPELEIFADDVKCAHGATVGELDAQ 308
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA-QKLIDISLEGSV 488
LFY RGI + A AL+ F+ + L ++ E +A Q + LE +
Sbjct: 309 ALFYMSSRGITPDRARALLTQAFIADALSRIGDEPVRDAFQAAAEAWLEERI 360
>gi|148240484|ref|YP_001225871.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
gi|147849023|emb|CAK24574.1| SufD protein, Fe-S cluster assembly [Synechococcus sp. WH 7803]
Length = 398
Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 84/212 (39%), Gaps = 8/212 (3%)
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H+ V+E+ A +++ + + S + + RS + + G
Sbjct: 176 HSHVIEVHLGQEARLRHGVLASASDDSS--------LLAHLAVEQEPRSSYDFVSVCRGW 227
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
P L Q+ +A++ +Q + T + + + K ++A S+
Sbjct: 228 RFGRLEPRVLQVDGQATTRLTGLAMTGTDEQFATHTSVCFEGPEGSLDQLQKAVAADRSH 287
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ + G + V R A + +LL+ N P +E H AT S++ +
Sbjct: 288 SIFNGAIQVPRAAQRTDASQLSRNLLLSNRARVDAKPELEIVADDVRCAHGATVSQLQQD 347
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
LFY RG+ + A AL++ G+ +V+ +LP
Sbjct: 348 QLFYLRSRGVAADEAAALLLKGYCCDVVDRLP 379
>gi|114797340|ref|YP_761304.1| FeS assembly protein SufD [Hyphomonas neptunium ATCC 15444]
gi|114737514|gb|ABI75639.1| FeS assembly protein SufD [Hyphomonas neptunium ATCC 15444]
Length = 401
Score = 156 bits (395), Expect = 7e-36, Method: Composition-based stats.
Identities = 47/257 (18%), Positives = 92/257 (35%), Gaps = 13/257 (5%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
+ + + G R + + G+ + E A+++E A
Sbjct: 137 ETPVRLHMVFSGPGAINAARVVFLVRPGAELQVSESHLG----GAAFSASLIEFTLQPGA 192
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
+ Q G++Q I + + D + + T L G+ ++ + +
Sbjct: 193 RLNRVVYQRGGKGEAQA---ITALIHQETDAQTKQ-----TVLAFGAKVSRIETRLVHQE 244
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
S + ++ +D + + H A+ +R +KG ++GK V R A
Sbjct: 245 TGSHATLNAAYLAGDGYHVDFTSHVRHGARACITRQATKGAVVNGGRGVFQGKFHVPRNA 304
Query: 391 -AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
+ Q ++LL+ + P +E H T+ + LFY QRGIP
Sbjct: 305 GQQTDASMQHNALLLEDGAEVFAKPELEILADDVQCAHGNTSGALDAAQLFYLRQRGIPL 364
Query: 450 EAAIALIVNGFVREVLQ 466
A A++ F+ E L+
Sbjct: 365 VQARAMLTEAFIAEALE 381
>gi|329850527|ref|ZP_08265372.1| uncharacterized protein family UPF0051 family protein
[Asticcacaulis biprosthecum C19]
gi|328840842|gb|EGF90413.1| uncharacterized protein family UPF0051 family protein
[Asticcacaulis biprosthecum C19]
Length = 348
Score = 156 bits (394), Expect = 8e-36, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 65/177 (36%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + +K+ G+ + G + + G D T+
Sbjct: 152 IRRSTIDTRPGAKVHQAVFSAGAQFSRFETHLNHAGHGADVVLDGAYLLKGKAHFDLTTR 211
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + + +G+ + ++G++ V RGA + + +L++ + P
Sbjct: 212 VTHGEIDGVTSQTIRGLVKDQATAVFQGRILVERGADGTDARMRHQALILNDGAHIRAKP 271
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+E H T + +E +F+C RG+ E A L+ + FV V +P E
Sbjct: 272 ELEIYADDVQCAHGNTIGALDEEAMFFCQSRGMDEATARGLLTHAFVMPVADAIPDE 328
>gi|330040358|ref|XP_003239873.1| Fe-S cluster assembly protein SufD [Cryptomonas paramecium]
gi|327206798|gb|AEA38975.1| Fe-S cluster assembly protein SufD [Cryptomonas paramecium]
Length = 476
Score = 156 bits (394), Expect = 9e-36, Method: Composition-based stats.
Identities = 62/285 (21%), Positives = 113/285 (39%), Gaps = 9/285 (3%)
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-ERTLIIADEGSYVSYLE 245
F++ALN+A + S + IP+ C E++ +F+ N+ + + + LII + S +
Sbjct: 193 FFSALNTACLSQISVLLIPENYNCEKEINLFFQQNDYCSKFYLNQKLIIISGRNSNSKIS 252
Query: 246 GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMR 305
V +V D + +KY ++Q I++
Sbjct: 253 QYHFSFSKLTYFDNTNVNIVLKDYSVMKYYV----TAKNNQLSSQIFSL----YVDVKKN 304
Query: 306 SKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSR 365
+ + S I+ + G S SI+I N D +++ H S
Sbjct: 305 VSFDLSIASSNSFISRVNVGIDMNGVNSDICIKSISIVNDEGMTDFHSRITHNYPQCVSS 364
Query: 366 IVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNL 425
+ K + + + GK+ VH A +S C SLL+ +P +E N +
Sbjct: 365 QLHKNLVEKNGHGIFSGKIQVHGTAFNSEACQLCKSLLLSKKSKVDIMPILEINNDNVKC 424
Query: 426 EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
H +T + + +FY RGI E + ++VN F+R+V+ P
Sbjct: 425 THGSTIADLDKNQIFYLQSRGISLETSYKMLVNSFIRDVIDSFPD 469
>gi|149194700|ref|ZP_01871795.1| hypothetical protein CMTB2_04947 [Caminibacter mediatlanticus TB-2]
gi|149135123|gb|EDM23604.1| hypothetical protein CMTB2_04947 [Caminibacter mediatlanticus TB-2]
Length = 351
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 86/370 (23%), Positives = 155/370 (41%), Gaps = 28/370 (7%)
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
++ + + E L V + A + F + + GVI +P+SEAI ++
Sbjct: 6 EMNLDKNDIERLKEVGVDEDLQKAGEFIQIDHSPFSCNILQEGVILLPLSEAIKKYK--- 62
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++ V D +G F+++ KGV+ T + E+ Q LI
Sbjct: 63 --WVKDYVNEDD-----------VEGYFLWVKKGVKVKKPFQTCAFMKEEN-VQNIFNLI 108
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I +E S ++ L CT ++ LH + V NA++ Y+ + W +
Sbjct: 109 ILEEESEINLLSSCTISSFVDSALHIGKSKYVIKKNAKLTYTMIHMWGE-------NVEV 161
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ + +S P C L+ + + F SI +S I+ G
Sbjct: 162 YPKTFVEVEEGGEFVSTYVNLYKVKRIISNPICKLQ-QNAKASFNSIIVSYPSSYIEMGG 220
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++ +N+ + IVS+ + G N K + +C+SLL+ + TI
Sbjct: 221 EVYLEGENSRADIVSRNVIYGGEN---IAKGRIIAKNKEVSGHIECESLLLSDEAHMSTI 277
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +ES N L HEA KI+ E + Y + +GI E++AI+LIV GF++ ++ + +
Sbjct: 278 PILESFNKDVRLTHEAAVGKIAKEEIEYLMSKGIDEDSAISLIVKGFLKLEIEGISEDLK 337
Query: 474 VEAQKLIDIS 483
+ Q I++S
Sbjct: 338 EKIQNAINLS 347
>gi|307294775|ref|ZP_07574617.1| SufBD protein [Sphingobium chlorophenolicum L-1]
gi|306879249|gb|EFN10467.1| SufBD protein [Sphingobium chlorophenolicum L-1]
Length = 250
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 12/231 (5%)
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
A + +++ +Q+ G + V ++ + L
Sbjct: 26 WPTPAPTRIDVAAGESVRHHLLQDAADGAAA--------VHDYAITIADGARCDFHVLNI 77
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
G + + L GE S E I Q ++ T + H + TS + I
Sbjct: 78 GGKLGRVTFAVTL-GEGSHFELNGAIIGGSDQVLEIITSVTHAQPDATSGQTIRSILGQH 136
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ +Y G ++V R A + F ++L+ A+ P +E H AT ++
Sbjct: 137 ATGSYLGSINVARDAQRTDAFQSVKAMLLDRTATANAKPELEIYADDVKCAHGATVGELD 196
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA---VEAQKLIDIS 483
+ LFY RG+ A L++ FV V + E +EA L +
Sbjct: 197 KQALFYMASRGMDPATAKTLLLKAFVAGVFDDVADEAVKASLEAAALAKLE 247
>gi|85709856|ref|ZP_01040921.1| hypothetical protein NAP1_13263 [Erythrobacter sp. NAP1]
gi|85688566|gb|EAQ28570.1| hypothetical protein NAP1_13263 [Erythrobacter sp. NAP1]
Length = 255
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 3/192 (1%)
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V + G + ++ TG L E + EF + I + + T
Sbjct: 60 MVDRLRVHVGRGGRFEAFKVITGGKYARVELDVTL-EEGAHFEFGGVTIGGSDKVQEFVT 118
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
H N TS + + G S ++ G++ V R A + LL+ A+ +
Sbjct: 119 LTRHDHPNATSNQTVRAVHWGQSTGSFLGEIKVARHAQKTDAAQDFKGLLLEAGASANAV 178
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H AT ++ + +Y RG+ +AA L+V F+ + L E
Sbjct: 179 PQLEIFADDVKCAHGATVGQLDEAARYYMAARGLSPDAAKRLLVQAFIGDAFVALEDEAT 238
Query: 474 VEAQKLIDISLE 485
E ++++ +L+
Sbjct: 239 RE--RMLEDALK 248
>gi|146329128|ref|YP_001209734.1| SufD protein [Dichelobacter nodosus VCS1703A]
gi|146232598|gb|ABQ13576.1| SufD protein [Dichelobacter nodosus VCS1703A]
Length = 379
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/292 (19%), Positives = 109/292 (37%), Gaps = 10/292 (3%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
++ S V+ + +AALN A+ + + IP+ C ++ QF R +
Sbjct: 71 REAFSGVLEDKNAPFAALNIALHDETLLLEIPEQTVCEDVMTI-HIDALGHIWQFSRLEV 129
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ G+ + + N +V+ L+ AE++ W Q
Sbjct: 130 VVGRGAKAALWLDFGV---ENNAAQVPLVQFSLLEAAELEAVV---WLNAQDQSSTAQTV 183
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
F+ + D + TG A+ L G+ + F + + + D
Sbjct: 184 FLHSQQDHHSRLAI---NAAITGGALARVDMHADLHGQSAQFSFGGVQSAARQEIHDYHV 240
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++ HL + +S + +G+ + + G + V + A + LL+ A ++
Sbjct: 241 QVRHLNEACSSEQIIRGVLNDQAQGFFDGLIFVQQDAQLTAGRQDSRYLLLSPQARAQSM 300
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
P +E H AT + + LFY RGI A +L++ FV+E +
Sbjct: 301 PRLEIYADDVQCAHGATVGFLDAQALFYLQTRGIDLATARSLLMMSFVQEAV 352
>gi|221055788|ref|XP_002259032.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809103|emb|CAQ39805.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1248
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 12/265 (4%)
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
R ++ S ++ E + ++ L A + + +K++ Q
Sbjct: 979 NPVTTPRLVVYVKGNSKINIHESHISLNQNNGGLVNAFSRIAMEKESNVKHTLSQELGK- 1037
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
++ F G + + + GS + + E Y +++
Sbjct: 1038 ------NVWYFHNV-SVKNGFEANYKFADVLLGSLSSRVNLQIE-GEKGCKQESYGLSLL 1089
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q I H N + + K + + + +R + + R A ++ T C S+L
Sbjct: 1090 EDKQNISQYEMFHHEHPNMETNQLFKFLVSDKGHAVWRSRGRIERDAIKAKLNTLCRSVL 1149
Query: 404 IGNNCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ A IP +E S H AT S + +E +F + RGI E+ A +++ FV
Sbjct: 1150 LNFGASAVAIPTLEIIPSDIECANHGATISDLEEEPIFSLMTRGISEKIARQMMMKAFVN 1209
Query: 463 EVLQKLPMEFAVEA--QKLIDISLE 485
E+L+ +P E E +K++++SL+
Sbjct: 1210 EILEHIPDENLRERVHKKVLELSLK 1234
>gi|20809015|ref|NP_624186.1| membrane components of an uncharacterized iron-regulated ABC-type
transporter SufB [Thermoanaerobacter tengcongensis MB4]
gi|20517685|gb|AAM25790.1| predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Thermoanaerobacter
tengcongensis MB4]
Length = 345
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 57/318 (17%), Positives = 114/318 (35%), Gaps = 17/318 (5%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
++K + + D + G ++ I G + + N + +
Sbjct: 40 ILKNFTTDKAYGIDPKLTEEVEKHYNAGFYIKISSGKEIKKPVVFDYIANLQNDLLLDYN 99
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+I + S V+ + + E + L+A + + + +Q S
Sbjct: 100 VIEVEPYSKVTVVFDYNS---GEKGFKNGITRLIAKEGSTVNIVKIQRLGDDFSDFDN-- 154
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
G ++ ++W+ + G+ I+ S L E S+ + Q+ D
Sbjct: 155 ------CLVEVGEKATVNWSNVVIGAHISAFDVSVYLSEEGGSFTAKSVFLGVDSQKYDM 208
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
K+ H A TTS + KG G + T+ G + + +GA ++ LL+ +
Sbjct: 209 SYKVYHYAPKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVRSI 268
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
IP + H A+ ++ + L+Y + RG E A L+V + V+ +P +
Sbjct: 269 AIPALYCAEEDVQANHSASAGQLDENKLYYVMSRGFSLEEARLLMVQAVLNPVIDLIPYD 328
Query: 472 FAVEAQKLIDISLEGSVG 489
E L G +G
Sbjct: 329 PIREI------ILRGHIG 340
>gi|294013381|ref|YP_003546841.1| Fe-S cluster assembly protein SufD [Sphingobium japonicum UT26S]
gi|292676711|dbj|BAI98229.1| Fe-S cluster assembly protein SufD [Sphingobium japonicum UT26S]
Length = 250
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 12/231 (5%)
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
A + ++ +Q+ G + V ++ + L
Sbjct: 26 WPTPAPTRIDVAAGENARHHLLQDAADGAAA--------VHDYAITVADGARCDFHILNI 77
Query: 316 GSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGF 375
G + + L G+ S E I G Q ++ T + H + TS + I
Sbjct: 78 GGKLGRVTFAVTL-GKGSHFELNGAIIGGGDQVLEIVTAVTHAQPDATSGQTIRSILGQH 136
Query: 376 SNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
+ +Y G ++V R A + F ++L+ A+ P +E H AT ++
Sbjct: 137 ATGSYLGSINVARDAQRTDAFQSVKAMLLDRTATANAKPELEIYADDVKCAHGATVGELD 196
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA---VEAQKLIDIS 483
+ LFY RG+ A L++ FV V + E +EA L +
Sbjct: 197 QQALFYMASRGMDPATAKTLLLKAFVAGVFDDVADEAVKDSLEAAALAKLE 247
>gi|295689538|ref|YP_003593231.1| SufBD protein [Caulobacter segnis ATCC 21756]
gi|295431441|gb|ADG10613.1| SufBD protein [Caulobacter segnis ATCC 21756]
Length = 342
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 10/254 (3%)
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
F Q ++ G + LE R + +++ + A ++ +
Sbjct: 81 FVALADKASQGASHALVVKPGESLVLLESHE--GRAGAYVSDVALDIAVGEGASLERIVL 138
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+ V +K + T L +G+ G +
Sbjct: 139 VDDEAEAVN--------VVTAEVALAPGAKFAQTVLTSGARRQRIETRVRHPGAHAEVRL 190
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
+ + + D + + H + + ++KG+ + ++G++ V +GA +
Sbjct: 191 DGAYLLDAQRHADLTSVVTHGGLDGVTSQLTKGMVTDQARGVFQGRIVVEKGADQTDARM 250
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+L++ + P + + H T + DE LFY QRGIPE A A++
Sbjct: 251 GHHALILSDKAEIDAKPELLIFADDVSCAHGNTIGALDDEVLFYAKQRGIPEADAKAMLT 310
Query: 458 NGFVREVLQKLPME 471
FV EV++++ E
Sbjct: 311 VAFVGEVIERIEHE 324
>gi|171185413|ref|YP_001794332.1| SufBD protein [Thermoproteus neutrophilus V24Sta]
gi|170934625|gb|ACB39886.1| SufBD protein [Thermoproteus neutrophilus V24Sta]
Length = 398
Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/333 (20%), Positives = 135/333 (40%), Gaps = 17/333 (5%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV + E HPDL ++YL +VP + Y A+ + G V + G + +
Sbjct: 77 PGVEVYRVEEFADAHPDLAREYLWRLVPPDLDKYTAVAALRGVGGYVVRVKAGAKVREPV 136
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+G Q +++ +EG+ GC LHAAV E L A++++
Sbjct: 137 LAC-LSIVRGGLQAPHNVVVVEEGAEAVVYTGCVIAPEAV-GLHAAVSEFYVLRGAKLRF 194
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V +W + + P +L+ + +
Sbjct: 195 IMVHSWARAAHVRPRTGV-------LVEEGGEYVEYYANLQEVDSLQTSPRIVLK-DGAR 246
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ + G +ID GT + + + ++ ++A S+ R V ++ SR
Sbjct: 247 AHATSVLLGLGRAKIDVGTTAVLEGDGAAAELTTRALAADSSSVVMRALVEAYK---PSR 303
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+C LL+ + A T+P + + + L HEA+ ++++E + Y + +G E A++
Sbjct: 304 GHVECSGLLLSDGARAVTVPQLAAYHRDAALTHEASIGRLAEEEINYLMAKGFTYEEAVS 363
Query: 455 LIVNGFV-REVLQKLPME---FAVEAQKLIDIS 483
++V GFV ++ + LP + + +KL+
Sbjct: 364 ILVRGFVTTDIHRYLPEQARRYVENIEKLVAER 396
>gi|254478151|ref|ZP_05091533.1| sufB/sufD domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214035880|gb|EEB76572.1| sufB/sufD domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 345
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/318 (17%), Positives = 114/318 (35%), Gaps = 17/318 (5%)
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
++K + + D + G ++ I G + + N + +
Sbjct: 40 ILKNFTTDKAYGIDPKLTEEVEKHYNAGFYIKISSGKEIKKPVVFDYIANLQNDLLLDYN 99
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+I + S V+ + + E + L+A + + + +Q S
Sbjct: 100 VIEVEPYSKVTVVFDYNS---GEKGFKNGITRLIAKEGSTVNIVKIQRLGDDFSDFDN-- 154
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
G ++ ++W+ + G+ I+ S L E S+ + Q+ D
Sbjct: 155 ------CLVEVGEKATVNWSNVVIGAHISAFDVSVYLSEEGGSFTAKSVFLGVDSQKYDM 208
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
K+ H A TTS + KG G + T+ G + + +GA ++ LL+ +
Sbjct: 209 SYKVYHYAPKTTSSVDLKGALKGSAKATFIGNIDIKKGAKKAKAEENETVLLLDKTVRSI 268
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
IP + H A+ ++ + L+Y + RG E A L+V + V+ +P +
Sbjct: 269 AIPALYCAEEDVQANHSASAGQLDENKLYYVMSRGFSLEEARLLMVQAVLNPVIDLIPYD 328
Query: 472 FAVEAQKLIDISLEGSVG 489
E L G +G
Sbjct: 329 PIREI------ILRGHIG 340
>gi|156098262|ref|XP_001615163.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148804037|gb|EDL45436.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1256
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 103/265 (38%), Gaps = 12/265 (4%)
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
R +I S ++ E + ++ L A + + + +K++ Q
Sbjct: 987 NPVTTPRLVIYVKGNSKINIHESHISLSQNNGGLVNAFSRITMEEKSTVKHTLSQELGK- 1045
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
++ F G ++ + + GS + + E Y +++
Sbjct: 1046 ------NVWYFHNV-SVKNGFKANYKFADVLLGSLSSRVNLQIE-GEKGCKQESYGLSLL 1097
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
Q I H N + + K + + + +R + + R A ++ T C S+L
Sbjct: 1098 EDKQNISQYEMFHHEHPNMETNQLFKFLVSDKGHAVWRSRGRIERDAIKAKLNTLCRSVL 1157
Query: 404 IGNNCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ A IP +E S H AT S + +E +F + RGI E A +++ FV
Sbjct: 1158 LNFGASAVAIPTLEIIPSDIECANHGATISDLEEEPIFSLMTRGITERVARQMMMKAFVN 1217
Query: 463 EVLQKLPMEFAVEA--QKLIDISLE 485
E+L+ +P E E +K++ +SL+
Sbjct: 1218 EILEHIPDENLRERVHKKVLQLSLK 1242
>gi|302336611|ref|YP_003801817.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
gi|301633796|gb|ADK79223.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
Length = 429
Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/434 (16%), Positives = 132/434 (30%), Gaps = 26/434 (5%)
Query: 53 WMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
W+ E + A W + W + P + + A + T
Sbjct: 13 WLSEHKNKADAAWKQLP---WPGRKNPQWKNSPVSLFEAETFTAEQDW----EEHAWDTA 65
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDL 172
+ P A AV D K+ ++ G+ A E
Sbjct: 66 DTSSGPQVTASG-AIDDDRYAAVLRFVDGKPDFD--KQTIESRGIELSFG--AAPEWG-- 118
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
+ D +A L A + I GV + +
Sbjct: 119 --ARFLEAADLSDKLHARL-FAEAAPVMSLSIAPGVNLAGPILLDWVDGRPDFYAAPLFF 175
Query: 233 IIADEGSYVSYLEGCTAP-QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+ E + + P R + + + NA + +++
Sbjct: 176 LKIGEAAQLRLTLCWRTPDGRKTRLFLSPALFVDLERNARLDLFELEHLSHRAR------ 229
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
F+ ++++ W++ G ++ L G S +F + S +D
Sbjct: 230 --FLDYPVAILEEKAELRWSRGIFGVGVSKSTILARLEGRASRFDFAAAYASPDKSHVDI 287
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
H+A T SR ++ G G + V + + +L + + A
Sbjct: 288 SVTQRHIAPFTWSRSRLDAVADGSGKAISHGLIEVKESGIGTDAYLSTKTLSLSPHAKAV 347
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
++P + + H +T IS E LFY RGI A ALI G + +L++ P E
Sbjct: 348 SLPELAIDTNDLTASHGSTVGTISPEELFYLASRGIEIGEAKALIAEGVLGLILERTPSE 407
Query: 472 FAVEAQKLIDISLE 485
+ LI+ +LE
Sbjct: 408 LTDTLESLIEDALE 421
>gi|323141529|ref|ZP_08076415.1| SufB/sufD domain protein [Phascolarctobacterium sp. YIT 12067]
gi|322413988|gb|EFY04821.1| SufB/sufD domain protein [Phascolarctobacterium sp. YIT 12067]
Length = 367
Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 96/265 (36%), Gaps = 12/265 (4%)
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
T + + I A GS V+ L + ++ A++K VQ
Sbjct: 109 ADNTSCYNQIEIEAKPGSEVTVL-MTYISTAQAKGQASIQTKIDVAAGAKVKLVQVQLLG 167
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
+ + G G + Q++ G+ + L G+ S
Sbjct: 168 KD--------FLHINDVGSELGDNAAFELLQIQLGADKIYNGVRTELLGDGSDFNAAIGY 219
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
Q +D H K TT + + G+ G + YRG + G+A + +
Sbjct: 220 YGRHGQTVDMNFIANHYGKKTTCEMTADGVLQGGAKKIYRGTIDFKNGSAGAVGDEKETV 279
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
LL+ ++ TIP I H A+ K+ DE LFY RG E+ A+ ++ +
Sbjct: 280 LLLSDDVVNQTIPLILCSEEDVQGNHGASIGKLDDELLFYLCSRGFSEQEAVDMMAKAKI 339
Query: 462 REVLQKLPMEFAVEAQKLIDISLEG 486
+ +K+ E V +L+ LEG
Sbjct: 340 DALCRKIDDEDTV---QLVQRYLEG 361
>gi|319957060|ref|YP_004168323.1| sufbd protein [Nitratifractor salsuginis DSM 16511]
gi|319419464|gb|ADV46574.1| SufBD protein [Nitratifractor salsuginis DSM 16511]
Length = 415
Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats.
Identities = 56/364 (15%), Positives = 123/364 (33%), Gaps = 11/364 (3%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+LG+P R+ E + T +K VI + A+ E +
Sbjct: 31 LAELGMPTRKSEAYRYFDIEPLMEHDWEVVQIAPTGEIARSRKEIVITDGVVTAMPESAE 90
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+V V GD+F + I + +++ R G RT
Sbjct: 91 IVVGCSDAVEIDGDHFDPLYYLGHLMSKEIISI--RFKQDAKVTIVHRFTRPGKLLAYRT 148
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+ D V E + + + +A+++ Q GD
Sbjct: 149 ALYVDANVRVQVDERYEGAEACGALVLGG-YDAFIARDADLRLIKDQTLKVGD------- 200
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
Y + ++ + G + L + + + + + + +
Sbjct: 201 YTPILSHRIKVDSQAHCGLHTFDFGQGSGLQLIRAELH-KHAGIDADHLLYAADHARRGT 259
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
++++H+ +++ S +K I A + + + V +++ ++L+ +
Sbjct: 260 VSQIVHIGQSSLSNQRAKNILAEKARGIFDALIKVEHTGKYTKAHQNSKAILLNDGAYMA 319
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+ P +E H +TT ++ + LFY RGI ++ A +++ GF E++ L E
Sbjct: 320 SKPQLEIYIDDLEASHGSTTGQLDEAQLFYLRSRGISKDEARKMLILGFANELIDALEDE 379
Query: 472 FAVE 475
E
Sbjct: 380 GLRE 383
>gi|260433732|ref|ZP_05787703.1| protein SufB [Silicibacter lacuscaerulensis ITI-1157]
gi|260417560|gb|EEX10819.1| protein SufB [Silicibacter lacuscaerulensis ITI-1157]
Length = 91
Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats.
Identities = 61/90 (67%), Positives = 76/90 (84%)
Query: 400 DSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
LLIG+ CGAHT+PYIE KN+S +EHEATTSK+ ++ LFYC QRG+ EE A+AL+VNG
Sbjct: 2 RQLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDEDQLFYCRQRGMDEEEAVALVVNG 61
Query: 460 FVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
F ++VLQ LPMEFA+EAQ+L+ ISLEGSVG
Sbjct: 62 FCKDVLQALPMEFAMEAQQLVAISLEGSVG 91
>gi|78778458|ref|YP_396570.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9312]
gi|78711957|gb|ABB49134.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9312]
Length = 405
Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats.
Identities = 55/381 (14%), Positives = 128/381 (33%), Gaps = 19/381 (4%)
Query: 90 AAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFK 149
+ P + + L + + ++Q+ L S + + + +
Sbjct: 29 SNPLPNPKSEIWRLSNKSKLSNFLDYSVNEKDQKSLISYPYSSQNIIRLTIGENSQISLI 88
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVR 209
E+ I + + D K + +++ LN ++ D + + +
Sbjct: 89 EK-------NYSIQQLSKDKLDKFIKQQISCFDQNEHWSDLLNLSLSCDKNILGLKINGS 141
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
+ F + + + +I ++ + L+ EN + +N
Sbjct: 142 KIPPIEI-FSHASSNSLKAKTLVIFLEKNCDIELLQ---VNLGVENSALSQSTFFFLEEN 197
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ + + V N V + SK + L
Sbjct: 198 SSVTHGVV--------SYGENKSNLVNSLNVIQQKNSKYNLGSLHFKFNYARFEIHIKQS 249
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + ++ +QI + TK+ N ++K ++ S+ + G + V +
Sbjct: 250 AGNAKTNIKGMQVTKNDEQISTHTKIYFNGPNGFLDQINKSLADDKSHAIFEGSIIVPKI 309
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A + +LL+ N T P +E +H AT S++++E LFY RGI
Sbjct: 310 AQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRARGITL 369
Query: 450 EAAIALIVNGFVREVLQKLPM 470
+ A L ++ + +E++ +P+
Sbjct: 370 KEASKLQLSSYFQEIISFIPV 390
>gi|85375378|ref|YP_459440.1| hypothetical protein ELI_12755 [Erythrobacter litoralis HTCC2594]
gi|84788461|gb|ABC64643.1| hypothetical protein ELI_12755 [Erythrobacter litoralis HTCC2594]
Length = 251
Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 70/189 (37%), Gaps = 3/189 (1%)
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
+ G ++ + GS L + + EF + I G + T
Sbjct: 59 HRVRLTIGEGARAEMFTVIAGSDYCRVEVEVRL-AKGAHFEFGGVTIGGGDAVREFVTHT 117
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
+H TS V + + + + G + V R A + LL+ A+ +P
Sbjct: 118 VHAEPEATSNQVVRAVHWDQGSGNFLGAIDVVRDAQKTDAAQDFKGLLLNKGASANAVPQ 177
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+E H AT ++ + +Y RGIP A L+V F+ + + E E
Sbjct: 178 LEIFADDVKCAHGATVGQLDEMARYYMAARGIPPHTAKKLLVRAFIADAFVAIGDE--AE 235
Query: 476 AQKLIDISL 484
++L++ +L
Sbjct: 236 QERLLEAAL 244
>gi|23006789|ref|ZP_00048949.1| COG0719: ABC-type transport system involved in Fe-S cluster
assembly, permease component [Magnetospirillum
magnetotacticum MS-1]
Length = 190
Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 74/177 (41%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
R+++ L TG+ ++ + GE + A+ Q DS H A
Sbjct: 1 MRLDARAQLETVNLVTGAKLSRHQIYLHVAGEDANAVVNGAALLGHGQLADSTLLADHAA 60
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
R + K + G S ++GK+ V + A + + D LL+ ++ P +E
Sbjct: 61 TGGVGREMFKTVIDGDSTGVFQGKIIVRQVAQQTDGKMKSDCLLLTDDGQMMNKPELEIF 120
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
H AT ++ LFY + RG+P A +L+V FV E ++ + E A +A
Sbjct: 121 ADDVACGHGATCGAPDEDLLFYLMARGLPRATAESLLVQAFVGEAVETVTHEGARDA 177
>gi|315185404|gb|EFU19176.1| SufBD protein [Spirochaeta thermophila DSM 6578]
Length = 373
Score = 152 bits (385), Expect = 9e-35, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 8/227 (3%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+V + + A + D + V + + L TGS
Sbjct: 143 NVLVSVWVGEGARVVLV--------DEGARRADAARVVHVWGEVERGAVLEHASLVTGSW 194
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
T + L GE + + ++ D+ T H+ T S ++
Sbjct: 195 FTKQRVHVRLAGEGAEAFLRGVMVAGRGDHYDARTVQEHVGPQTRSLAQYHAVAGEDGRT 254
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
Y+G + V A + + +LL+ +++IP + H +TT + +E
Sbjct: 255 VYQGLIEVAGSARGTDAYLSNKNLLLSEEAASYSIPTLSIGTDDVRCSHGSTTGHVREEE 314
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
LFY RGIPEE A+ L+ +R V LP A + + ++
Sbjct: 315 LFYLRSRGIPEEEAVGLLAAAHIRAVTDHLPSSLAERVARRAERKVK 361
>gi|307718279|ref|YP_003873811.1| hypothetical protein STHERM_c05730 [Spirochaeta thermophila DSM
6192]
gi|306532004|gb|ADN01538.1| hypothetical protein STHERM_c05730 [Spirochaeta thermophila DSM
6192]
Length = 360
Score = 152 bits (385), Expect = 9e-35, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 8/227 (3%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+V + + A + D + V + + L TGS
Sbjct: 130 NVLVSVWVGEGARVVLV--------DEGARRADAARVVHVWGEVERGAVLEHASLVTGSW 181
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
T + L GE + + ++ D+ T H+ T S ++
Sbjct: 182 FTKQRVHVRLAGEGAEAFLRGVMVAGRGDHYDARTVQEHVGPQTRSLAQYHAVAGEDGRT 241
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
Y+G + V A + + +LL+ +++IP + H +TT + +E
Sbjct: 242 VYQGLIEVAGSARGTDAYLSNKNLLLSEEAASYSIPTLSIGTDDVRCSHGSTTGHVREEE 301
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
LFY RGIPEE A+ L+ +R V LP A + + ++
Sbjct: 302 LFYLRSRGIPEEEAVGLLAAAHIRAVTDHLPSSLAERVARRAERKVK 348
>gi|227824760|ref|ZP_03989592.1| FeS assembly protein SufD [Acidaminococcus sp. D21]
gi|226905259|gb|EEH91177.1| FeS assembly protein SufD [Acidaminococcus sp. D21]
Length = 373
Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/345 (19%), Positives = 131/345 (37%), Gaps = 19/345 (5%)
Query: 149 KEELKKSGVIFMPISEAICEHPDL---VKKYLSTVVPVGDNFY----AALNSAVFTDGSF 201
+EL+ V +P A+ E + V + VP ++F ++ A+
Sbjct: 20 HQELETPEVKLVP-EAAVEERHEGSAEVTFFTGRRVPNLEDFAGASQESMKDALEKGNVN 78
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
I ++ + ++E + + I A + S V + L +
Sbjct: 79 CEISVKDGEKAKVWLDYGLSETVSALVGQLYIKAGKNSDVEVFTTFE--GDAPDGLVNVL 136
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+ A +NA + S VQ G + +R G SK+ + E G T
Sbjct: 137 FYVEAGENANVNVSKVQ--------IHGSHVRHIDQRYTHDGKGSKVKFVSAEVGGKETL 188
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
Y L ++S + ++ + + Q D + T + I++ G G S +R
Sbjct: 189 VYVRTDLDHDESDFKSQTMYLGSENQLFDFSYWVPTQGIKTNTDILTTGALMGTSRKYFR 248
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + RG + + LL+ + ++P + K H A++ ++ + LFY
Sbjct: 249 GTIDFLRGGKKAVGNEEDTCLLLNKGVHSISVPLLLCKEDDVVGNHAASSGQVDPDMLFY 308
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLE 485
+ RG+ E A +IV +R V+ +L E A +A + + +E
Sbjct: 309 LMSRGLSENGARLVIVESNIRPVIDQLGDETLANKALRAVREKME 353
>gi|119871556|ref|YP_929563.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
gi|119672964|gb|ABL87220.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
Length = 398
Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats.
Identities = 79/328 (24%), Positives = 137/328 (41%), Gaps = 15/328 (4%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GV + E +PDL ++YL +VP + Y A+ + G + + G + +
Sbjct: 77 PGVEVYRVEEFADAYPDLAREYLWRLVPPDLDKYTAVAALRGVGGYVIRVKAGAKVRDPI 136
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+G Q ++I +EG+ GC LH + E L A+++Y
Sbjct: 137 LAC-LSIVRGGLQAPHNVVIVEEGAEAVVYTGCVIAPEVV-GLHVGISEFYVLRGAKLRY 194
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V NW + + V + G+ G + + S P +LR E +
Sbjct: 195 IMVHNW-TKAAHVRPRTGVLVEEGGEYVGYYANLQEVNSLQTS------PRIVLR-EGAR 246
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
SI + G QID GT + + ++ ++ SN T R V H+ SR
Sbjct: 247 AHATSILLGLGSAQIDVGTTAVLEGDGAAVELTTRALATDRSNITMRALVEAHKL---SR 303
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+C LL+ + TIP + + + L HEA+ ++++E + Y +G E A++
Sbjct: 304 GHVECSGLLLSGSANIVTIPQLAAYHQDAMLTHEASIGRLAEEEINYLQAKGFTYEEAVS 363
Query: 455 LIVNGFV-REVLQKLPMEFAVEAQKLID 481
L+V GFV ++ + LP E A + I+
Sbjct: 364 LLVRGFVTTDIHRYLP-EQARRYVESIE 390
>gi|118497445|ref|YP_898495.1| sufS activator complex, sufD subunit [Francisella tularensis subsp.
novicida U112]
gi|195536136|ref|ZP_03079143.1| SufB/sufD domain protein [Francisella tularensis subsp. novicida
FTE]
gi|254372806|ref|ZP_04988295.1| hypothetical protein FTCG_00376 [Francisella tularensis subsp.
novicida GA99-3549]
gi|118423351|gb|ABK89741.1| sufS activator complex, sufD subunit [Francisella novicida U112]
gi|151570533|gb|EDN36187.1| hypothetical protein FTCG_00376 [Francisella novicida GA99-3549]
gi|194372613|gb|EDX27324.1| SufB/sufD domain protein [Francisella tularensis subsp. novicida
FTE]
Length = 381
Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 72/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 189 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINDSAIANTCFLVNHNA 248
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++G + + ++ + N +T P +E
Sbjct: 249 SHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIF 308
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 309 ADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEE 368
Query: 480 IDISLE 485
I SLE
Sbjct: 369 IVESLE 374
>gi|149185214|ref|ZP_01863531.1| hypothetical protein ED21_19212 [Erythrobacter sp. SD-21]
gi|148831325|gb|EDL49759.1| hypothetical protein ED21_19212 [Erythrobacter sp. SD-21]
Length = 250
Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 3/190 (1%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
VT+ G ++ + + L G+ + E I + + T+
Sbjct: 57 VTRLRVNVGEGARFELFGVIASADYARVEVEVTL-GKGAHFEMGGITVGGRDTVREFVTR 115
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
H + TS + + G + G++ V R A + LL+ + +P
Sbjct: 116 TTHAEPDGTSNQTVRAVHWGNGAGNFLGQIEVVRHAQKTDAAQDFKGLLLEKGASVNAVP 175
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT ++ + FY RG+ E + L+V F+ + L L E A
Sbjct: 176 QLEIFADDVKCAHGATVGQLDESARFYMAARGLTPELSRRLLVQAFIGDALVALDDEEAQ 235
Query: 475 EAQKLIDISL 484
E +L+ +L
Sbjct: 236 E--RLLQAAL 243
>gi|296282939|ref|ZP_06860937.1| hypothetical protein CbatJ_04933 [Citromicrobium bathyomarinum
JL354]
Length = 256
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 3/190 (1%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + ++ L G + L E + E I + G + T+
Sbjct: 63 MRRLRIVLEKNARAELAALVAGGQLGRLEVVVTL-AEGAHFELGGITLGGGDTTREIVTR 121
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M H TS + + G + G++ V R A + LL+ +++P
Sbjct: 122 MAHEKPGATSNQTVRSVHWGKGTGNFLGRIDVVRDAQKTDAAQSFKGLLLEKGASVNSVP 181
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H A+ ++ + FY RG+P E L+V F+ + ++L E
Sbjct: 182 QLEIYADDVQCAHGASVGQLDENARFYMAARGLPPETIRRLLVQAFIGDATRELADEATR 241
Query: 475 EAQKLIDISL 484
E L++ +L
Sbjct: 242 ET--LLEKAL 249
>gi|208779239|ref|ZP_03246585.1| SufB/sufD domain protein [Francisella novicida FTG]
gi|254374266|ref|ZP_04989748.1| hypothetical protein FTDG_00431 [Francisella novicida GA99-3548]
gi|151571986|gb|EDN37640.1| hypothetical protein FTDG_00431 [Francisella novicida GA99-3548]
gi|208745039|gb|EDZ91337.1| SufB/sufD domain protein [Francisella novicida FTG]
Length = 381
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 72/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 189 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINDSAIANTCFLVNHNA 248
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++G + + ++ + N +T P +E
Sbjct: 249 SHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIF 308
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 309 ADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEE 368
Query: 480 IDISLE 485
I SLE
Sbjct: 369 IVESLE 374
>gi|167471030|ref|ZP_02335734.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis FV-1]
gi|330861451|emb|CBX71674.1| hypothetical protein YEW_LR49810 [Yersinia enterocolitica W22703]
Length = 88
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/88 (65%), Positives = 73/88 (82%)
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
+LIG + GAHT PY+E +N++ LEHEATTSKI D+ LFYCLQRGI E+ AI++IVNGF
Sbjct: 1 MLIGPDSGAHTFPYVEVRNNTAQLEHEATTSKIGDDQLFYCLQRGISEDDAISMIVNGFC 60
Query: 462 REVLQKLPMEFAVEAQKLIDISLEGSVG 489
++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 61 KDVFSELPLEFAVEAQKLLAISLEHSVG 88
>gi|269302476|gb|ACZ32576.1| FeS assembly protein SufD [Chlamydophila pneumoniae LPCoLN]
Length = 415
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/388 (18%), Positives = 134/388 (34%), Gaps = 27/388 (6%)
Query: 86 LYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVV 145
Y+ S S EL ++ + E L F+ + +
Sbjct: 25 YTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGASE-LIKQHWLHNNHSLAFECILIN 83
Query: 146 TTFKEELKK--SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT--DGSF 201
++ L + GVI I EA ++ + V + A L +AV + G
Sbjct: 84 GKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGF-----DVNKHPLAFL-NAVCSEDRGVV 137
Query: 202 VYIPKGVRCPMELSTYFRI----NEKGTGQFERTLIIADEGSYVSYLEGCT---APQRDE 254
+YIP+ ++ + ++ R ++I + +
Sbjct: 138 IYIPEEMQTSDPIFVRHISFPTVSDHDVIFSPRIVVILGQRASAQIQISHDVDLEMVGSS 197
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ V EL + A++ V + D+ I V K CR + + Q
Sbjct: 198 KTIVNGVTELFVGEGADLTVFMVPRYSEEDTLSWSTIAT-VEKDAVCRMTHNLLESCQ-- 254
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
W + + G++ E S+ + ++ M H A+ T SR K I
Sbjct: 255 ---GFGWFDNTSYIVGKKGHAE--SLVLVQSPRKTWVNNLMSHDAEETVSRQNIKSILY- 308
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ + G +S+ S + + D+LL+ + T P +E + H AT +
Sbjct: 309 SGHFLFEGTISISSQGDLSDAYQKHDTLLLSSEARVSTFPRLEIETDEVKASHGATVGPL 368
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ +FY RG+ E A +++GF++
Sbjct: 369 DPQQIFYMRSRGMTEAEAQEKLIHGFLK 396
>gi|255659878|ref|ZP_05405287.1| iron-regulated ABC-type transporter membrane component [Mitsuokella
multacida DSM 20544]
gi|260847958|gb|EEX67965.1| iron-regulated ABC-type transporter membrane component [Mitsuokella
multacida DSM 20544]
Length = 278
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 8/213 (3%)
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
++ + A++ T Q + + G + ++T +E G+ T
Sbjct: 61 QVHLEEGAKLHLVTAQLVPDDAL--------YTCRVKVYVGKGATFAYTVVEAGAHQTAT 112
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
L G+ S + + + +G ID + + T + + +G G S +RG
Sbjct: 113 ELHVDLAGDDSKADIWGLYFGDGESVIDLNYIIRQGGRRTDANMQVRGALLGKSEKIFRG 172
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ GA S + +L+ + ++P + S + H + K+ ++ LFY
Sbjct: 173 TLDFLEGAKGSVGRENEEVVLLSPDVRNRSVPIMLSHEDDVDGHHAVSVGKMDEDKLFYL 232
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+ RG+ A L+V VL ++P + E
Sbjct: 233 MSRGLDLAEAQRLVVEASFNPVLDRIPDDALKE 265
>gi|213024963|ref|ZP_03339410.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 148
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 93/146 (63%), Positives = 117/146 (80%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+TKR C G SK+SWTQ ETGSAITWKYPSC+LRG+ S GEFYS+A+++G QQ D+GTK
Sbjct: 1 MTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTK 60
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG +CGAHT P
Sbjct: 61 MIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFP 120
Query: 415 YIESKNSSCNLEHEATTSKISDEHLF 440
Y+E +N+S LE EATTS+I ++ LF
Sbjct: 121 YVECRNNSAQLELEATTSRIGEDQLF 146
>gi|323456627|gb|EGB12493.1| putative FeS assembly protein [Aureococcus anophagefferens]
Length = 327
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 98/258 (37%), Gaps = 13/258 (5%)
Query: 214 LSTYFRINEKGTGQ-FERTLIIADEGSYVSYLEGCT---APQRDENQLHAAVVELVALDN 269
L + TG RT++ +G+ V+ E ++L A
Sbjct: 58 LHVVHVRSAGATGVLHPRTVVHVGDGARVALRESFVAVGPAAEKRSRLTNARTNCRVGAG 117
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ + DSQ ++ + G + + G+A+ +
Sbjct: 118 GVLTHV-------LDSQEADQVHVHHVQCGVR--RDGEFRSRAISDGAAVGRVAVEAEIL 168
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G + +F + + G Q +D T + H A + S + ++ + T++G+++V
Sbjct: 169 GPHARFDFLGLQLGAGDQNLDLRTALRHTAGDAESVQDIRNVAGERAKLTFKGRIAVPVT 228
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
+ C SLL+ + + +P +E H AT + + +E LFY R + E
Sbjct: 229 GQKTNADQICKSLLLDDGATVNAMPSLEIVADDVKCTHGATIADLDEEGLFYLNSRMLSE 288
Query: 450 EAAIALIVNGFVREVLQK 467
+ A L++ F +++Q+
Sbjct: 289 KDARKLLLKAFCYDIVQR 306
>gi|62184700|ref|YP_219485.1| putative ABC transport protein [Chlamydophila abortus S26/3]
gi|62147767|emb|CAH63511.1| putative ABC transport protein [Chlamydophila abortus S26/3]
Length = 408
Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats.
Identities = 62/403 (15%), Positives = 126/403 (31%), Gaps = 25/403 (6%)
Query: 72 SWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTS 131
++ ++ I YY + +++ P ++ L + I G +
Sbjct: 4 TFPIVKDSPIHQAAQAYYEKYSQLESFKAIFRSYPW----FKNLAQSPEDYHIANGGSET 59
Query: 132 KVAVDAVFDSVSVVTTF----KEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
++ K E S + +S + E + ++
Sbjct: 60 AKQHWLHHENSLSCECILINGKYESSLSQLPEGVLSMTLKEARSIFSTFIKKYTLDTHPL 119
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN----EKGTGQFERTLIIADEGSYVSY 243
+ V +G +YIP+ + + + R ++I + S
Sbjct: 120 AFLNSVCVQEEGVVIYIPEEFQVSEPICIRHICSPTSRSDKVIYSPRIIVIVGKHSSCRV 179
Query: 244 LEGCTAPQR----DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ + + + E+ + AE+ T+Q Y + +
Sbjct: 180 FVSHHTERESGVAESFAIVNGLTEVFVSEGAELSL-TMQPKYISEERISW-----AHMAT 233
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
I E S W + + G+ + GE +S M H A
Sbjct: 234 IEAQGACSIHQHLQEHVSGCGWFDNTFSMIGDGAHGESLVSTLSPKK--TWVRNLMYHDA 291
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ TTSR K I + + + G + + S + + D+LL+ ++ T P +E
Sbjct: 292 ERTTSRQNIKSILS-SGHFLFEGGIHITTQGMFSDAYQKHDTLLLSDDACVTTFPRLEIL 350
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
H A + + +FY RG+ E A +V GF+
Sbjct: 351 TDDVKASHGAAVGPLDPQQIFYMQSRGMTREEAQKKLVQGFLS 393
>gi|257458414|ref|ZP_05623556.1| FeS assembly protein SufD [Treponema vincentii ATCC 35580]
gi|257444218|gb|EEV19319.1| FeS assembly protein SufD [Treponema vincentii ATCC 35580]
Length = 372
Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/295 (19%), Positives = 120/295 (40%), Gaps = 12/295 (4%)
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL-- 244
+ A G ++ I + F ++ + F+++ I + + +
Sbjct: 71 HFTDEVQAKRNSGFYLKIDAAAGSLQDFFVRFSVDVEHPVLFDQSYIDIADNAEARLILY 130
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
+ ++ + +A+++ +QN+ NF T R D G
Sbjct: 131 FDTDPKSAEVQSYRNGLISISVGSHAQVEIIKIQNFADSAL-------NFETVRMDV-GE 182
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++I+ ++ G+ T S ++ + S Y + ++ +++D ++ KNT S
Sbjct: 183 AARITVHDIQLGAQKTGASYSSYIQNDNSEVFIYPLYFTDKARRMDIEHNLIINGKNTLS 242
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
I ++G ++ +RG + +++G + S +S+++ N A +IP I
Sbjct: 243 EIKARGALKNEAHKMFRGNIFLNKGCSASVARFADNSIMLDKNAVAASIPTIFCDEDDVI 302
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
EH A+ S I E L+Y + RG E +A LI++ R V +P E +L
Sbjct: 303 GEHAASFSAIDAEKLYYLMSRGFDELSAKKLIIDSAFRPVFNAIPDETVR--NRL 355
>gi|71892140|ref|YP_277872.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|71796246|gb|AAZ40997.1| SufD [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 429
Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats.
Identities = 53/415 (12%), Positives = 127/415 (30%), Gaps = 49/415 (11%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ R + P+ + + F++ Y + E + +E L P E
Sbjct: 34 WERIKILGLPNIKKDSWKYTAFEEFLTY---------------NFEFSKNFE-LNTPQHE 77
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
+ ++ +F EL + + + D + ++
Sbjct: 78 KLSFPIDAYRLTFINGLF---------SPELSDKNIDP----WILKINRDPNRHNMTN-- 122
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG------TGQFERTLIIA 235
P+ + + L + + +P L + T + L I
Sbjct: 123 PIQPDMFLYLTECLSDATIHINLPTKKITKKPLYLLYINEGSDIKNKLVTSHYHHHLQIG 182
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
++ + A + + + +++ + + N
Sbjct: 183 NDSNTCVI--EHFISINKNGHFSGARMSMTTGNRSKLDHVKLIFENNASYHIAHNDIN-- 238
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
G S ++ + + + + + Q I +
Sbjct: 239 ------VGQSSNVNSSIFVILGPKFISHRTSAQINHSGSSLSLNSLLFLSEQDIGNICTY 292
Query: 356 --LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ + +SR + K I+ +S + G + V+ + + ++LL+ + H+I
Sbjct: 293 LEHNNREYASSRQLHKIIACNYSAGVFNGLIKVNPDSIKTDGIMINNNLLLNQDATIHSI 352
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
P +E + H AT I LFY RGIP++ A+ +++ F E++ +
Sbjct: 353 PKLEIYSDDVKCSHGATIGHIDTNQLFYLSTRGIPKKDALKMLIYAFAIEIIGSI 407
>gi|328676941|gb|AEB27811.1| Iron-sulfur cluster assembly protein SufD [Francisella cf. novicida
Fx1]
Length = 381
Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 71/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 189 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINDSAIANTCFLVNHNA 248
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V+ G + + ++ + N +T P +E
Sbjct: 249 SHTYSNVNFRGVANGNAKAWFNAKAIVNNGIEQIQAYQNNKNIQLSNKAEINTKPELEIF 308
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 309 ADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEE 368
Query: 480 IDISLE 485
I SLE
Sbjct: 369 IVESLE 374
>gi|229825142|ref|ZP_04451211.1| hypothetical protein GCWU000182_00493 [Abiotrophia defectiva ATCC
49176]
gi|229790514|gb|EEP26628.1| hypothetical protein GCWU000182_00493 [Abiotrophia defectiva ATCC
49176]
Length = 392
Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats.
Identities = 58/297 (19%), Positives = 107/297 (36%), Gaps = 13/297 (4%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
P D A +A + KGV+ + +R EK + +I EG
Sbjct: 95 KDAPSTDVVRNAFKAAGIP-VKVIATKKGVKAKKPVKITYRAGEKNS--LNNHIIYVSEG 151
Query: 239 SYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
S ++ +E + + + + +NA++K V +
Sbjct: 152 SELTVIE--LFESENRDNIAGLQTRVYVGENAKVKLVRVNLLSENTDHFDDLGLHL---- 205
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+K QLE G ++ C L G +S + + G +D
Sbjct: 206 ----EDDAKAELVQLELGGKRSYVGVRCELVGRKSEYNSATGYLCKGESLLDMNYVTNEW 261
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+ + + + G+ + YRG + GA +R F + D+L + ++P I
Sbjct: 262 GRKASCNMDASGVLLDKATKVYRGTIDFKEGAKGARGFEKEDTLHFSSEVINKSVPLILC 321
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+H AT +I ++ +FY RGI E AA L+ ++ V +K+ + E
Sbjct: 322 HEEDVEGDHGATIGRIDEKLMFYIKSRGIDENAAKELMTEAYINAVTEKIGDDETEE 378
>gi|33242048|ref|NP_876989.1| putative ABC transporter membrane protein [Chlamydophila pneumoniae
TW-183]
gi|33236558|gb|AAP98646.1| putative ABC transporter membrane protein [Chlamydophila pneumoniae
TW-183]
Length = 421
Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats.
Identities = 70/388 (18%), Positives = 134/388 (34%), Gaps = 27/388 (6%)
Query: 86 LYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVV 145
Y+ S S EL ++ + E L F+ + +
Sbjct: 31 YTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGASE-LIKQHWLHNNHSLAFECILIN 89
Query: 146 TTFKEELKK--SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT--DGSF 201
++ L + GVI I EA ++ + V + A L +AV + G
Sbjct: 90 GKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGF-----DVNKHPLAFL-NAVCSEDRGVV 143
Query: 202 VYIPKGVRCPMELSTYFRI----NEKGTGQFERTLIIADEGSYVSYLEGCT---APQRDE 254
+YIP+ ++ + ++ R ++I + +
Sbjct: 144 IYIPEEMQTSDPIFVRHISFPTVSDHDVIFSPRIVVILGQRASAQIQISHDVDLEMVGSS 203
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ V EL + A++ V + D+ I V K CR ++ + Q
Sbjct: 204 KTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIAT-VEKDAICRMTQNLLESCQ-- 260
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
W + + G++ E S+ + ++ M H A+ T SR K I
Sbjct: 261 ---GFGWFDNTSYIVGKKGHAE--SLVLVQSPRKTWVNNLMSHDAEETVSRQNIKSILY- 314
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ + G +S+ S + D+LL+ + T P +E + H AT +
Sbjct: 315 SGHFLFEGTISISSQGDLSDANQKHDTLLLSSEARVSTFPRLEIETDEVKASHGATVGPL 374
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ +FY RG+ E A +++GF++
Sbjct: 375 DPQQIFYMRSRGMTEAEAQEKLIHGFLK 402
>gi|15618600|ref|NP_224886.1| ABC transporter membrane protein [Chlamydophila pneumoniae CWL029]
gi|15836222|ref|NP_300746.1| ABC transporter membrane protein [Chlamydophila pneumoniae J138]
gi|16752350|ref|NP_444608.1| hypothetical protein CP0056 [Chlamydophila pneumoniae AR39]
gi|4376992|gb|AAD18829.1| ABC Transporter Membrane Protein [Chlamydophila pneumoniae CWL029]
gi|7188993|gb|AAF37946.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979062|dbj|BAA98897.1| ABC transporter membrane protein [Chlamydophila pneumoniae J138]
Length = 415
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 70/388 (18%), Positives = 134/388 (34%), Gaps = 27/388 (6%)
Query: 86 LYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVV 145
Y+ S S EL ++ + E L F+ + +
Sbjct: 25 YTQYSKQPSSKEVLSSFSWIQELSLFPDRYNLATGASE-LIKQHWLHNNHSLAFECILIN 83
Query: 146 TTFKEELKK--SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT--DGSF 201
++ L + GVI I EA ++ + V + A L +AV + G
Sbjct: 84 GKYEPSLSQLPEGVIVCGIDEARGSLSSFMQGF-----DVNKHPLAFL-NAVCSEDRGVV 137
Query: 202 VYIPKGVRCPMELSTYFRI----NEKGTGQFERTLIIADEGSYVSYLEGCT---APQRDE 254
+YIP+ ++ + ++ R ++I + +
Sbjct: 138 IYIPEEMQTSDPIFVRHISFPTVSDHDVIFSPRIVVILGQRASAQIQISHDVDLEMVGSS 197
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
+ V EL + A++ V + D+ I V K CR ++ + Q
Sbjct: 198 KTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIAT-VEKDAICRMTQNLLESCQ-- 254
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
W + + G++ E S+ + ++ M H A+ T SR K I
Sbjct: 255 ---GFGWFDNTSYIVGKKGHAE--SLVLVQSPRKTWVNNLMSHDAEETVSRQNIKSILY- 308
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ + G +S+ S + D+LL+ + T P +E + H AT +
Sbjct: 309 SGHFLFEGTISISSQGDLSDANQKHDTLLLSSEARVSTFPRLEIETDEVKASHGATVGPL 368
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ +FY RG+ E A +++GF++
Sbjct: 369 DPQQIFYMRSRGMTEAEAQEKLIHGFLK 396
>gi|126465160|ref|YP_001040269.1| SufBD protein [Staphylothermus marinus F1]
gi|126013983|gb|ABN69361.1| SufBD protein [Staphylothermus marinus F1]
Length = 359
Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/368 (18%), Positives = 146/368 (39%), Gaps = 21/368 (5%)
Query: 118 PIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYL 177
++E A + + V + + + + L+++G+I + ++ A+ + K+ +
Sbjct: 4 DLKEYVEKANLPDPHLTVAGIINDKVLKGYYYNYLRRNGIILIDLNTALSNNT--YKEEI 61
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
+ L A T G ++ +P +R + + F I +G Q ++ +
Sbjct: 62 HDIAYELGFDKELLYKA--TTGFYIKVPDEIRSSIPIYACFIIGSRGFTQRIINVVNIGD 119
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ +GC H+A+ L N+ + + NW P + G I
Sbjct: 120 NAEAFIAKGCATIV--PEGAHSAITLLRIGKNSRLTSLMIHNWAPYVNVGAKTI------ 171
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
G S S+ ++ + + + + + + ++S ++
Sbjct: 172 --GIVGENSIYSYYYVKLSPVRALGLSTSIKVYRNAQVDVHEATYVHRNTNVNSSIEIEL 229
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ I ++G+ + R + + A +R +C+ L++G TIP +E
Sbjct: 230 NGEGAGGLITTRGVVEENGSMNTR--LMIKSNANKTRGHIECNGLVLGKG-IYRTIPVLE 286
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQ 477
+K L HEA+ KIS E LFY RG+ EE A +I+ GF+ + LP +
Sbjct: 287 TKVDDTYLTHEASIGKISGEQLFYLQSRGLSEEEATKMIILGFLASSMHGLP----ESMR 342
Query: 478 KLIDISLE 485
K ++++L+
Sbjct: 343 KYVEVALK 350
>gi|113953876|ref|YP_731675.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
gi|113881227|gb|ABI46185.1| FeS assembly protein SufD [Synechococcus sp. CC9311]
Length = 410
Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 100/260 (38%), Gaps = 11/260 (4%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ + R L++ +E + + + H+ ++E+ ++
Sbjct: 145 VPPVELVMVAADAMLVPTRVLLLVEEKAEL---DCLQVLSAKGQAAHSHLLEIHLGQESK 201
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ + + ++ + + RS S + G PS +
Sbjct: 202 VNHGLLALGDGQEA--------LLANLAVEQESRSHYSLVSVSQGWLFGRLEPSLVQVDG 253
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
Q+ + ++++ +Q T M T V K I+A S++ + G + V R A
Sbjct: 254 QASASIHGLSVTAADEQFAVHTAMRFEGPEGTLDQVQKTIAADRSHSIFNGAIQVPRPAQ 313
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ SLL+ P +E H AT S++ ++ LFY RGI + +
Sbjct: 314 RTNASQLSRSLLLSGRARVDAKPELEIVADDVRCTHGATVSQLQEDQLFYLRSRGITQSS 373
Query: 452 AIALIVNGFVREVLQKLPME 471
A AL++ G+ ++VL +LP++
Sbjct: 374 AAALLLRGYCQDVLDRLPLD 393
>gi|94496622|ref|ZP_01303198.1| SufBD [Sphingomonas sp. SKA58]
gi|94423982|gb|EAT09007.1| SufBD [Sphingomonas sp. SKA58]
Length = 250
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 1/180 (0%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
V + + L G + + L G+ S E I G Q ++ T+
Sbjct: 57 VHDYVIDIADGGRFDFHLLNIGGRLGRVTFAVTL-GKGSHFELNGAIIGGGDQTLEIVTQ 115
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ H + TS + I + +Y G ++V R A + F ++L+ A+ P
Sbjct: 116 VTHARPDATSGQTIRSILGQRATGSYLGSINVARDAQRTDAFQSVKAMLLDRTATANAKP 175
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H AT ++ + LFY RG+ A L++ FV V + E
Sbjct: 176 ELEIFADDVKCAHGATVGELDRQALFYMASRGMDPATAKTLLLKAFVAGVFDDVSDEAVK 235
>gi|134301880|ref|YP_001121849.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224457154|ref|ZP_03665627.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370553|ref|ZP_04986558.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874869|ref|ZP_05247579.1| sufB/sufD domain-containing protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|134049657|gb|ABO46728.1| sufB/sufD domain protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568796|gb|EDN34450.1| hypothetical protein FTBG_00336 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840868|gb|EET19304.1| sufB/sufD domain-containing protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159262|gb|ADA78653.1| sufB/sufD domain protein [Francisella tularensis subsp. tularensis
NE061598]
Length = 381
Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 72/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 189 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANTCFLVNHNA 248
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++G + + ++ + N +T P +E
Sbjct: 249 SHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIF 308
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 309 ADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEE 368
Query: 480 IDISLE 485
I SL+
Sbjct: 369 IVESLK 374
>gi|56708066|ref|YP_169962.1| hypothetical protein FTT_0973 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670537|ref|YP_667094.1| hypothetical protein FTF0973 [Francisella tularensis subsp.
tularensis FSC198]
gi|56604558|emb|CAG45606.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320870|emb|CAL08989.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
Length = 384
Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 72/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 192 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANTCFLVNHNA 251
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++G + + ++ + N +T P +E
Sbjct: 252 SHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIF 311
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 312 ADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEE 371
Query: 480 IDISLE 485
I SL+
Sbjct: 372 IVESLK 377
>gi|291514466|emb|CBK63676.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Alistipes shahii WAL 8301]
Length = 273
Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 58/148 (39%)
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
L G + E + ++ G + H + S KG++ G + + G
Sbjct: 109 YRIDLDGADAENELGGVFLAAGEEHCVLKLHTAHNVADCRSDSYVKGVAGGQAVGEFCGM 168
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V V A + Q ++L+ T P +E H AT ++ E + Y
Sbjct: 169 VYVAPDAQRTDARQQSRNILLSRTARITTQPQLEIYADDVKCSHGATVGQMDAEAILYMR 228
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPME 471
QRG+ E A L + GFV +V+ + +E
Sbjct: 229 QRGLSEAQARRLQIEGFVGDVVTRCGIE 256
>gi|187931694|ref|YP_001891678.1| SufS activator complex, sufD subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712603|gb|ACD30900.1| SufS activator complex, sufD subunit [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 381
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 72/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 189 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANTCFLVNHNA 248
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++G + + ++ + N +T P +E
Sbjct: 249 SHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIF 308
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 309 ADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEE 368
Query: 480 IDISLE 485
I SL+
Sbjct: 369 IVESLK 374
>gi|241668542|ref|ZP_04756120.1| SufS activator complex, SufD subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254877077|ref|ZP_05249787.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843098|gb|EET21512.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 381
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 58/345 (16%), Positives = 124/345 (35%), Gaps = 12/345 (3%)
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
S + FK + +++ VI + AI + L + + + + A+
Sbjct: 40 SKDYLEGFKFDTEENVVIILDGVLAIDYNKKL---NHISALELHRDDRTMSRLAIENSKH 96
Query: 201 F-VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
F + IPK + + L K + D + + EN
Sbjct: 97 FAINIPKDTKDSLSLIFINTDMAKNKLTNISLKLDVDMFANLDL--DIDFVSLTENSAIN 154
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
+++ ++A++ ++ N ++ N++ ++ + L +
Sbjct: 155 LFLDVNVAESAKVNFTN--NADNPNNTQLITTANYL----INLDRAAEFNGFSLLNKDGL 208
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
L S + + + ++ + H A +T S + +G++ G S
Sbjct: 209 LRNDFVVNLNKPHSRFDIRGLYLVADNAIANACFLVNHNASHTYSNVNFRGVANGSSKAW 268
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
+ K V++G + F ++ + N +T P +E + H AT ++ + L
Sbjct: 269 FNAKAVVNKGIEQIQAFQNNKNIQLSNKAEINTKPELEIFSDDVVCTHGATIGELDKDAL 328
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
FY RG+ E+A L++ FV+ L F E ++ I SL
Sbjct: 329 FYLQSRGLTLESAQHLLLESFVKSQLTSDDFPFENEIKEQILESL 373
>gi|266624776|ref|ZP_06117711.1| putative FeS assembly protein SufD [Clostridium hathewayi DSM
13479]
gi|288863346|gb|EFC95644.1| putative FeS assembly protein SufD [Clostridium hathewayi DSM
13479]
Length = 359
Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats.
Identities = 64/323 (19%), Positives = 114/323 (35%), Gaps = 12/323 (3%)
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
++G I+E + E + +V+P G + + ++
Sbjct: 31 EAGESPTVITEGLGEAEPWNEDI--SVLPTGMGEDMDRLAGEAGTAAIRIQSGPLKEKKR 88
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ +F ++ G L++ + ++ + P + L A N +K
Sbjct: 89 AALHFVCSDGGKSFQPVELLVREGECLTVIMDFTSPP--EAAGLAAVQTRFQVNKNGRLK 146
Query: 274 YSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
+Q G Y F+ G QL G + T+ L G S
Sbjct: 147 LIQLQLLGSG--------YRFLNDIGGRCEEDGAAEVVQLFLGGSETYAGCRADLAGRDS 198
Query: 334 CGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHS 393
+ G Q+ D H + ++SRI++ G+ + +RG + GA +
Sbjct: 199 VLNADIGYLGRGNQRFDMNYTADHRGERSSSRILAGGVLRDRAFKLFRGTIDFKSGAVGA 258
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAI 453
+ D LL G++ TIP I H AT ++ +E LFY RG+ E A
Sbjct: 259 EGEEKEDVLLFGDDVVNQTIPLILCAEEDVLGSHGATIGRLDEELLFYLCSRGMRREEAE 318
Query: 454 ALIVNGFVREVLQKLPMEFAVEA 476
A+I + V +K E A +
Sbjct: 319 AMITRARLEAVCRKSGDEAAEQM 341
>gi|302339983|ref|YP_003805189.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
gi|301637168|gb|ADK82595.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
Length = 378
Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats.
Identities = 62/332 (18%), Positives = 131/332 (39%), Gaps = 16/332 (4%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG--SFVYIPKGVRCPM 212
G+ +PI++A+ + L ++Y ++P + + N A F+ + +G + +
Sbjct: 54 DGIELLPIADALETYDWLRERYYWGLIPEETSPLS-QNKAFSEKPLGYFLRVKEGEKAKL 112
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEI 272
+ Q ++I +E + + + GC + + H AV E +A++
Sbjct: 113 PSQAALYMTGSLGRQLLHNVVILEEDAELELITGCVSNPFMKGGEHIAVSETYVGKHAKL 172
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+ + +W P S +S + I P L+G
Sbjct: 173 TNTMIHSWSPDVRVMPHSAT-------IVDTGGSYVSNYISLRPAGIMESNPVTYLKGAG 225
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++SI + + I G + A+ T++ I + + G +G + G A
Sbjct: 226 ASAKYFSIVLGSEASMITLGGDVYLNAEGTSAEIAHRAVCTGGKI-IQKGLLI---GNAE 281
Query: 393 SRNFTQCDSLLIGNNC--GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
C +LI +IP + S + ++ HEA+ KI+ + + Y + G+ E
Sbjct: 282 CHAHVDCAGMLITPGSDGYIESIPGLRSHHEEAHMSHEASIGKIAPQQVQYLMAHGLEER 341
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
AI++IV GF+ + L E ++ ++
Sbjct: 342 EAISMIVRGFLDADIHGLGPELDRRISEIAEL 373
>gi|167627988|ref|YP_001678488.1| SufS activator complex subunit SufD [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167597989|gb|ABZ87987.1| SufS activator complex, SufD subunit [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 381
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 58/345 (16%), Positives = 124/345 (35%), Gaps = 12/345 (3%)
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
S + FK + +++ VI + AI + L + + + + A+
Sbjct: 40 SKDYLEGFKFDTEENVVIILDGVLAIDYNKKL---NHISALELHRDDRTMSRLAIENSKH 96
Query: 201 F-VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
F + IPK + + L K + D + + EN
Sbjct: 97 FAINIPKDTKDSLSLIFINTDMAKNKLTNISLKLDVDMFANLDL--DIDFVSLTENSAIN 154
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
+++ ++A++ ++ N ++ N++ ++ + L +
Sbjct: 155 LFLDVNVAESAKVNFTN--NADNPNNTQLITTANYL----INLDRAAEFNGFSLLNKYGL 208
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
L S + + + ++ + H A +T S + +G++ G S
Sbjct: 209 LRNDFVVNLNKPHSRFDIRGLYLVADNAIANACFLVNHNASHTYSNVNFRGVANGSSKAW 268
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
+ K V++G + F ++ + N +T P +E + H AT ++ + L
Sbjct: 269 FNAKAVVNKGIEQIQAFQNNKNIQLSNKAEINTKPELEIFSDDVVCTHGATIGELDKDAL 328
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
FY RG+ E+A L++ FV+ L F E ++ I SL
Sbjct: 329 FYLQSRGLTLESAQHLLLESFVKSQLTSDDFPFENEIKEQILESL 373
>gi|254369467|ref|ZP_04985479.1| hypothetical protein FTAG_00451 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122417|gb|EDO66557.1| hypothetical protein FTAG_00451 [Francisella tularensis subsp.
holarctica FSC022]
Length = 384
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 72/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 192 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINYSAIANTCFLVNHNA 251
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++G + + ++ + N +T P +E
Sbjct: 252 SHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIF 311
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 312 ADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEE 371
Query: 480 IDISLE 485
I SL+
Sbjct: 372 IVESLK 377
>gi|29839820|ref|NP_828926.1| hypothetical protein CCA00052 [Chlamydophila caviae GPIC]
gi|29834167|gb|AAP04804.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 424
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 94/274 (34%), Gaps = 17/274 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRI----NEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
+G +Y+P+ + LS ++ + ++I + S S +
Sbjct: 133 EEGVVIYVPEEFQVREPLSIRHICFPMAQDERVIYSPKIVVILGKQSSCSVQISHHTARE 192
Query: 253 ----DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
+ + V E+ + AE+ + + + + I I
Sbjct: 193 SGVTESFAIINGVTEVFVSEGAELSLTMLPKYIHEERISWSHIAT------IEEQGACSI 246
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
+ E W + + G + GE +S M H A++TTSR
Sbjct: 247 TQYLQEDVGGYGWFDNTFSMIGNNAHGESLVSTLSPKK--TWVRNLMYHDAESTTSRQNI 304
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
K I + + G + + + + + D+LL+ ++ T P +E H
Sbjct: 305 KSILY-SGHFLFEGGIHITSRGMFADAYQKHDTLLLSDHAHVTTFPRLEILTDDVKASHG 363
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
AT + + +FY RG+ E A +V GF+
Sbjct: 364 ATVGPLDAQQMFYMQSRGMTREEAQKKLVRGFLS 397
>gi|315283514|ref|ZP_07871685.1| FeS assembly protein SufD [Listeria marthii FSL S4-120]
gi|313612842|gb|EFR86813.1| FeS assembly protein SufD [Listeria marthii FSL S4-120]
Length = 115
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
+ + G + GA+ S + L++ P + H A+
Sbjct: 1 MKERATTIFNGIGHIKHGASKSDAQQESRVLMLSPEARGDANPXXXIDENDVVAGHAASV 60
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
++ LFY + RGI ++ A L+++GF+ V+++LP+E + ++ +EG V
Sbjct: 61 GRVDPLQLFYLMSRGISQKEAERLVIHGFLDPVVRQLPIES---VKTMLREVIEGKV 114
>gi|284047830|ref|YP_003398169.1| SufBD protein [Acidaminococcus fermentans DSM 20731]
gi|283952051|gb|ADB46854.1| SufBD protein [Acidaminococcus fermentans DSM 20731]
Length = 374
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 61/309 (19%), Positives = 109/309 (35%), Gaps = 14/309 (4%)
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
E V+ Y +P +F A A+ + V P IN T
Sbjct: 41 QEGTAEVRTYEGNGLPDLGDFQGASAEALAQARQGGNVNCSVTVPAGEEASVWINYTVTE 100
Query: 227 QFERTL----IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
R + I A + S + E L + + A D A++ S VQ
Sbjct: 101 AVPRLVGQLKIQAGKDSRLHVYE--LFEGDAAEGLVNLLQFVEAEDGAQVTISKVQVHGE 158
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
+ +R G +++ + E G Y L +++ + S+ +
Sbjct: 159 QVRH--------IDQRLTREGKEARVKFVSAEVGGRQNLVYVRTDLDHDEAEFKSASMYL 210
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ Q D + + T + I++ G G S +RG + RG + L
Sbjct: 211 GSDDQLFDYSYWVPNKGCKTDTDILTTGALMGKSKKYFRGTIDFLRGGKKAVGNESDVCL 270
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
L+ + ++P + K H +++ +I + LFY + RG E A +IV +R
Sbjct: 271 LLNKGVHSISVPLLLCKEDDVVGNHASSSGQIDQDMLFYLMSRGFNEAGAQLIIVESNIR 330
Query: 463 EVLQKLPME 471
V+ +L E
Sbjct: 331 PVIDQLGDE 339
>gi|254367871|ref|ZP_04983891.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
gi|134253681|gb|EBA52775.1| ABC transporter, membrane protein [Francisella tularensis subsp.
holarctica 257]
Length = 384
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 71/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 192 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINYSAIANTCFLVNHNA 251
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++ + + ++ + N +T P +E
Sbjct: 252 SHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNKNIQLSNKAEINTKPELEIF 311
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 312 ADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESFVKSQLTSDDFPFENEIKEE 371
Query: 480 IDISLE 485
I SL+
Sbjct: 372 IVESLK 377
>gi|89256547|ref|YP_513909.1| hypothetical protein FTL_1228 [Francisella tularensis subsp.
holarctica LVS]
gi|167010972|ref|ZP_02275903.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Francisella tularensis subsp. holarctica FSC200]
gi|89144378|emb|CAJ79667.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
Length = 381
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 71/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 189 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINYSAIANTCFLVNHNA 248
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++ + + ++ + N +T P +E
Sbjct: 249 SHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNKNIQLSNKAEINTKPELEIF 308
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 309 ADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESFVKSQLTSDDFPFENEIKEE 368
Query: 480 IDISLE 485
I SL+
Sbjct: 369 IVESLK 374
>gi|331668368|ref|ZP_08369216.1| protein SufB [Escherichia coli TA271]
gi|331063562|gb|EGI35473.1| protein SufB [Escherichia coli TA271]
Length = 183
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 23/171 (13%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVD------------- 105
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 74 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLS 133
Query: 106 PELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
E+ +E+LG+P+RE + +VAVDA+FDSVSV TT++E+ +G
Sbjct: 134 KEVEAAFEQLGVPVREGK--------EVAVDAIFDSVSVATTYREKTGGAG 176
>gi|319760494|ref|YP_004124432.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
gi|318039208|gb|ADV33758.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
Length = 430
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 106/292 (36%), Gaps = 14/292 (4%)
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ-----FERTLIIADEGSYV 241
++ L + + +PK + L + + ++ +
Sbjct: 131 MFSYLTECLSDTTIHIKLPKSIETKKPLYLLHINSGTKIPNQLSLSNSHYYLETEQYTNT 190
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
S +E + + L ++ +++ + ++ Y+ + +
Sbjct: 191 SIIEHFVGIN-ENSYLFNTRSSILIGKQSKLNHISL-------IYENQSSYHISNQDINI 242
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK- 360
S + +GS T + + QS S+ I + T + H +
Sbjct: 243 NSCAHANSNVFIISGSKFTSHQINSKINHSQSFLSLNSLTILLNKEIGKIQTYVEHNNQN 302
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+ TS + K I+ S ++G + V++ + + + ++LL+ + ++ P +E +
Sbjct: 303 HATSEQLHKIIANDHSTGVFQGLIKVNKNSIKTDSKMTNNNLLLNKSASVYSKPKLEIYS 362
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
S H AT I H+FY RGI ++ AI +++ F E+ + + F
Sbjct: 363 DSVQCGHGATVGCIDMNHVFYLNTRGIVKKDAINMLIYAFTIEITKNITHPF 414
>gi|115314978|ref|YP_763701.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
holarctica OSU18]
gi|169656641|ref|YP_001428731.2| sufB/SufD domain-containing protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|115129877|gb|ABI83064.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Francisella tularensis subsp. holarctica OSU18]
gi|164551709|gb|ABU61775.2| sufB/sufD domain protein [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 384
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 71/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 192 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINYSAIANTCFLVNHNA 251
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++ + + ++ + N +T P +E
Sbjct: 252 SHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNKNIQLSNKAEINTKPELEIF 311
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 312 ADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESFVKSQLTSDDFPFENEIKEE 371
Query: 480 IDISLE 485
I SL+
Sbjct: 372 IVESLK 377
>gi|290952912|ref|ZP_06557533.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
holarctica URFT1]
gi|295313912|ref|ZP_06804478.1| sufB/SufD domain-containing protein [Francisella tularensis subsp.
holarctica URFT1]
Length = 381
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 71/186 (38%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++ + L A+ L S + + + N ++ + H A
Sbjct: 189 INLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSRFDVRGLYLINYSAIANTCFLVNHNA 248
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T S + +G++ G + + K V++ + + ++ + N +T P +E
Sbjct: 249 SHTYSNVNFRGVANGNAKAWFNAKAIVNKDIEQIQAYQNNKNIQLSNKAEINTKPELEIF 308
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
H AT ++ + LFY RG+ A L++ FV+ L F E ++
Sbjct: 309 ADDVVCTHGATIGQLDKDALFYLQSRGLEFHDAQHLLLESFVKSQLTSDDFPFENEIKEE 368
Query: 480 IDISLE 485
I SL+
Sbjct: 369 IVESLK 374
>gi|332183982|gb|AEE26236.1| Iron-sulfur cluster assembly protein SufD [Francisella cf. novicida
3523]
Length = 381
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 63/160 (39%)
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
++ + L A+ L S + + + N ++ + H A +T
Sbjct: 192 DRAAEFNGFNLLNKDALLRSDFIVNLNKPHSRFDVRGLYLVNENAIANTCFLVNHNASHT 251
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S + +G++ G + + K V++G + + ++ + N +T P +E
Sbjct: 252 YSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIFADD 311
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
H AT ++ + LFY RG+ A L++ FV+
Sbjct: 312 VVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVK 351
>gi|89898759|ref|YP_515869.1| ABC transporter integral membrane protein [Chlamydophila felis
Fe/C-56]
gi|89332131|dbj|BAE81724.1| ABC transporter integral membrane protein [Chlamydophila felis
Fe/C-56]
Length = 426
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 51/305 (16%), Positives = 97/305 (31%), Gaps = 17/305 (5%)
Query: 166 ICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ E + ++ + +G +Y+P+ + L +
Sbjct: 102 LKEAQSVFSTFIQRYAVDTQPLAFLNSVCAQDEGVVIYVPEKFQVSETLFIRHICSSTSQ 161
Query: 226 G----QFERTLIIADEGSYVSYLEGCTAPQR----DENQLHAAVVELVALDNAEIKYSTV 277
+ ++I + S L + + V E+ + AE+ +
Sbjct: 162 DDRVIYSPKIILILGKRSCCRVLVSHHTERESGVAQSFAIVNGVTEVFVSEGAELTLTM- 220
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
P + + + + I E W + + G S GE
Sbjct: 221 ---EPKYINEERVSWTHIATIEELGA--CSIYQRLQEDVGGYGWFDNTFSMIGSNSHGES 275
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFT 397
A+S M H A++TTSR K I + + G + V + +
Sbjct: 276 LVSALSPKK--TWVRNFMHHDAESTTSRQTIKSILY-SGHFLFEGSIHVTSRGVFTDAYQ 332
Query: 398 QCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+ D+LL+ + T P +E H AT + + +FY RG+ E A +V
Sbjct: 333 KHDTLLLSDQARVTTFPRLEILTDDVKASHGATVGPLDPQQIFYMQSRGMTREEAQKKLV 392
Query: 458 NGFVR 462
GF+
Sbjct: 393 QGFLS 397
>gi|42526183|ref|NP_971281.1| FeS assembly protein SufD [Treponema denticola ATCC 35405]
gi|41816295|gb|AAS11162.1| FeS assembly protein SufD [Treponema denticola ATCC 35405]
Length = 375
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 115/271 (42%), Gaps = 13/271 (4%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE---NQLHAAVVELVALDNA 270
+ F +++ +++ LI+ +EG+ D + ++ +VA N+
Sbjct: 104 VLINFTMDQANNVLYDQNLIVIEEGARAKIFFYHDVKAYDCSKADIFRNGLLSIVAEKNS 163
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++++ VQN NF T + ++++ ++ G+ I S +
Sbjct: 164 QVEFIKVQNL-------SHCGINFETVKIFAMEK-AQVTLYDIQLGAKINGASTSTYMPE 215
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
E + + Y + ++ ++ID + KN+ I +KG ++ +RG + ++RG
Sbjct: 216 EWAEVQIYPLYFADKTRRIDLEQNFIINGKNSLGAITAKGALKNKAHKMFRGNIFLNRGC 275
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
+ S +++++ TIP I EH A+ ++ + L+Y + RG E
Sbjct: 276 SKSIARFSDNTIMLDKTTVGATIPTIFCDEDDVIGEHAASFEAVNKDKLYYLMTRGFDEL 335
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+A LI+ + V ++ E E KL++
Sbjct: 336 SAKKLIIEAAFKPVFNRIDDETIRE--KLLE 364
>gi|58338011|ref|YP_194596.1| hypothetical protein LBA1754 [Lactobacillus acidophilus NCFM]
gi|58255328|gb|AAV43565.1| hypothetical protein LBA1754 [Lactobacillus acidophilus NCFM]
Length = 98
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 63/98 (64%)
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ +CD++++ + + TIP +NS+ +EHEAT SKIS+E L+Y RGIPE
Sbjct: 1 MVKAHVECDTIIMDDMSSSDTIPTNSIENSNVAMEHEATVSKISEEELYYLQSRGIPERK 60
Query: 452 AIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
A +I+ GFV ++LPME+AVE +LI +EG++G
Sbjct: 61 ATEMIIMGFVEPFTKQLPMEYAVELNRLISFQMEGAIG 98
>gi|332186323|ref|ZP_08388068.1| uncharacterized family protein [Sphingomonas sp. S17]
gi|332013691|gb|EGI55751.1| uncharacterized family protein [Sphingomonas sp. S17]
Length = 359
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 57/363 (15%), Positives = 110/363 (30%), Gaps = 20/363 (5%)
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
L +P +E + A + VT L G + + + E+ +
Sbjct: 4 TLELPSTREEAWRWADIDALRRAAESERAVPVTGADRFLDLPGARLLFVDGVLDENASNL 63
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
T + D+ G + + + + G I
Sbjct: 64 GLVQLTQIDASDHPLGRQA---LGRGWSLRLERDAVAD-PVQIVHV--ASGAANHLPAEI 117
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ E + E + + +A + G +
Sbjct: 118 VLAEDAAAQVYE-----TYVGRGWTNRLTRVKLAASARL-------MRGVRLLQDDGFVS 165
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ G + ++ T L G+ G+ + EF ++ G + +
Sbjct: 166 L--REEAELGEGASLTATFLAAGNMGARIDGGITQTGDGAYAEFGGALLTKGELKQECAV 223
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
+ H A N S + + ++A S + +V V R A + LL+ +
Sbjct: 224 SLRHAALNGQSHQLWRAVAADRSQASLAARVEVARHAQKTDGEQSLRGLLLQRTATVNLK 283
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P +E H AT ++ LFY RGIP+ A AL+ FV + + ++ +
Sbjct: 284 PELEIFADDVKCAHGATVGELDARALFYMQSRGIPKPRAQALLTRAFVADAIDRIGNDAV 343
Query: 474 VEA 476
EA
Sbjct: 344 REA 346
>gi|325473518|gb|EGC76711.1| FeS assembly protein SufD [Treponema denticola F0402]
Length = 375
Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ---LHAAVVELVALDNA 270
+ F +++ +++ LI+ +EG+ D ++ ++ +VA N+
Sbjct: 104 VLINFTMDQNNNVLYDQNLIVIEEGARAKIFFYHDVKAYDCSKADLFRNGLLSIVAEKNS 163
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++++ VQN NF T + ++++ ++ G+ I S +
Sbjct: 164 QVEFIKVQNL-------SHCGINFETVKIFAMEK-AQVTLYDIQLGAKINGASTSTYMPE 215
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
E + + Y + ++ ++ID + KN+ I +KG ++ +RG + ++RG
Sbjct: 216 EWAEVQIYPLYFADKTRRIDLEQNFIINGKNSLGAITAKGALKNKAHKMFRGNIFLNRGC 275
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
+ S +++++ TIP I EH A+ ++ + L+Y + RG E
Sbjct: 276 SKSIARFSDNTIMLDKTTVGATIPTIFCDEDDVIGEHAASFEAVNKDKLYYLMTRGFDEL 335
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+A LI+ + V ++ E E KL++
Sbjct: 336 SAKKLIIEAAFKPVFNRIDDETIRE--KLLE 364
>gi|87198224|ref|YP_495481.1| SufBD [Novosphingobium aromaticivorans DSM 12444]
gi|87133905|gb|ABD24647.1| SufBD [Novosphingobium aromaticivorans DSM 12444]
Length = 244
Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 1/166 (0%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ L GSA + L G+ + + ++ G Q + T++ H
Sbjct: 59 IVLEDGASFDLRLLNAGSAYGRIAVAVRL-GKGARFHLGAAQVAGGEQVAEIVTEVTHAE 117
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ S V + + G + TY G+V V RGA + ++L+ A+ P +E
Sbjct: 118 PDAVSSQVVRSVLGGKATGTYLGRVVVARGAIGTDGEQSIRAMLLDRRATANARPELEIY 177
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
H ++ LFY RG+P A L++ F+ E
Sbjct: 178 ADDVKCAHGCAVGELDATGLFYLQSRGLPPAEAKKLMLQAFIAEAF 223
>gi|329942371|ref|ZP_08291181.1| hypothetical protein G5Q_0060 [Chlamydophila psittaci Cal10]
gi|332287013|ref|YP_004421914.1| putative ABC transport protein [Chlamydophila psittaci 6BC]
gi|313847609|emb|CBY16597.1| putative ABC transport protein [Chlamydophila psittaci RD1]
gi|325507033|gb|ADZ18671.1| putative ABC transport protein [Chlamydophila psittaci 6BC]
gi|328815281|gb|EGF85269.1| hypothetical protein G5Q_0060 [Chlamydophila psittaci Cal10]
gi|328914243|gb|AEB55076.1| ABC transporter membrane protein [Chlamydophila psittaci 6BC]
Length = 426
Score = 146 bits (368), Expect = 9e-33, Method: Composition-based stats.
Identities = 60/410 (14%), Positives = 123/410 (30%), Gaps = 28/410 (6%)
Query: 65 WLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI 124
+L P ++ I YY + +++ P ++ L + I
Sbjct: 4 FLEHTFP---IVKDSPIHQAAQAYYEKYSQLESFKAIFRSYPW----FKNLAQSPEDYHI 56
Query: 125 LAGVQTSKVAVDAVFDSVSVVTTF----KEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
G + + K E S + +S + E + ++
Sbjct: 57 ANGGSETAKQHWLHHQNSLSCECVLINGKYESSLSQLPEGVLSMTLKEARSVFSTFIKKY 116
Query: 181 VPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN----EKGTGQFERTLIIAD 236
+ +G +Y+P+ + + + R ++I
Sbjct: 117 TLDTHPLAFLNSVCAQEEGVVIYVPEEFQVSEPICIRHICSPTSRSDKVIYSPRIIVIVG 176
Query: 237 EGSYVSYLEGCTAPQR----DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ S + + + + E+ + AE+ +Q Y + +
Sbjct: 177 KHSSCRVFVSHHTERESGVAESFAIVNGLTEVFVSEGAELSL-MMQPKYINEERISW--- 232
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
I E W + + G ++ GE +S
Sbjct: 233 --AHIVTIEEQGACSIHQHLQEHVDGYGWFDNTFSMIGNRAHGESLVSTLSPKK--TWVR 288
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
M H A+ TTSR K I + + + G + + S + + D+LL+ ++ T
Sbjct: 289 NMMYHDAEGTTSRQNIKSILS-SGHFLFEGGIHITSQGVFSDAYQKHDTLLLSDDACVTT 347
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
P +E H A + + +FY RG+ E A +V GF+
Sbjct: 348 FPRLEILTDDVKASHGAAVGPLDPQQIFYMQSRGMTREEAQKKLVQGFLS 397
>gi|261414938|ref|YP_003248621.1| SufBD protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261371394|gb|ACX74139.1| SufBD protein [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327221|gb|ADL26422.1| FeS assembly protein SufD [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 344
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 47/254 (18%), Positives = 106/254 (41%), Gaps = 13/254 (5%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
F T++ +G+ VS + + + A ++ +NA+++ +
Sbjct: 102 FGHTVLDIGKGAKVSL---EILDNKVTHDIAAERFDINVGENADVEIF----FANPACDL 154
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+F + + + ++ + +AI C L+GE + ++ S+ + +G
Sbjct: 155 PLRFRHFN----INQAAGANVRFSSICKDTAIGRVSVECHLKGEGANFDYRSLHVLDGEA 210
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
S + H A TTS +++ + +G + +Y G V V + +++L+ +
Sbjct: 211 SQHSRLTIYHEAPRTTSTQLARNLLSGSARVSYDGSVIVGYDCTGVNSSQLVNTILLSED 270
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
P ++ + H T ++ E +FY + RGIP++AA +++ F +E
Sbjct: 271 ASVSVKPVLKIYHDDVECTHGNTVGELDAEQMFYLVSRGIPKKAAQEMLMRSFAQETFLP 330
Query: 468 LPMEFAVEAQKLID 481
LP A ++L+
Sbjct: 331 LPDSPAK--KRLMA 342
>gi|295100508|emb|CBK98053.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Faecalibacterium prausnitzii L2-6]
Length = 360
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 56/325 (17%), Positives = 119/325 (36%), Gaps = 17/325 (5%)
Query: 147 TFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPK 206
F E+ + ++ + EA + + + A + A+ + +
Sbjct: 34 NFWGEVNFAYILPAGVGEAESDFSAFAESGMGAETDAYIAENATVRHALT-------VAE 86
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
GV + ++ + A GS ++ ++ E+ A++ + A
Sbjct: 87 GVSVAEPVILEVTLDAAHPTALTSLSVDAKAGSSLTIVQ--VLRGDAEHGAAASLTRIRA 144
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
+NA+++ +Q + G +++ ++E G ++
Sbjct: 145 GENAQVRLVQIQLLGDNARRW--------NAAAVEEGQNARVEQVRIELGGILSACGTRA 196
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L +S + ++ +G +D +H AK+T + + G+ G ++ RG +
Sbjct: 197 ALSAAKSEYDLDAVYFGSGSALLDYNDVSVHTAKDTMCEMHTAGVLTGHADKILRGTIDF 256
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
RGA D LL + T P I +H A+ ++ +E L+Y RG
Sbjct: 257 RRGAKRGVGHESEDVLLFSTDARNRTAPLILCGEEEVEGQHAASIGRLDEEKLYYLRSRG 316
Query: 447 IPEEAAIALIVNGFVREVLQKLPME 471
+ E A L+V+ L K+P+E
Sbjct: 317 LSEAQARRLMVDARFAPALDKIPLE 341
>gi|171780021|ref|ZP_02920925.1| hypothetical protein STRINF_01809 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281369|gb|EDT46804.1| hypothetical protein STRINF_01809 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 170
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 16 VDQYKYGFETNIQ-VDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWA 74
Y YGF ++ KGL E I+R ISA K+EP WML++RL + + + P +
Sbjct: 4 NRDYDYGFHDDLTPTYSTGKGLTEKIVRNISAYKHEPKWMLDYRLKSLELFYKLPMPDFG 63
Query: 75 RIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVA 134
I+FDD+ Y+ + DDV ++ T+E+LGIP E++ L+G
Sbjct: 64 P-DLSGIEFDDVIYFQK-LADKKVNDWDDVPDKIKETFERLGIPQAERDYLSGA------ 115
Query: 135 VDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTV 180
A ++S V KEE +K G+IF + +K L +
Sbjct: 116 -VAQYESEVVYHNMKEEFQKQGIIFTDTDRLCKNILNYLKSILGKL 160
>gi|326386614|ref|ZP_08208236.1| SufBD [Novosphingobium nitrogenifigens DSM 19370]
gi|326208929|gb|EGD59724.1| SufBD [Novosphingobium nitrogenifigens DSM 19370]
Length = 245
Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 1/176 (0%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
V G ++ L G A +L + + F + ++ G Q ++ T+
Sbjct: 55 VRDLAVTLGAGAEFDLRVLNAGKAYGRLSVRVVL-AKGAQFRFGAAQVAGGEQTVEIVTE 113
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
++H + S + + + G + Y G+V V RGA + ++L+ A+ P
Sbjct: 114 VVHAEPDAVSNQIVRQVLGGRATGNYLGRVLVERGAIGTDGSQSVRAMLLDRTATANARP 173
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+E H ++ E LFY RG+P AA AL++ F+ E P
Sbjct: 174 ELEIYADDVKCAHGCAIGELDREGLFYLASRGLPPAAAKALMLQAFLSEAFAGAPD 229
>gi|123967620|ref|YP_001008478.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
gi|123197730|gb|ABM69371.1| ABC transporter, membrane component [Prochlorococcus marinus str.
AS9601]
Length = 405
Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 91/260 (35%), Gaps = 11/260 (4%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
+ F + + + +I ++ + L+ +N + +N+
Sbjct: 142 EIPPIEIFSHSSSNSLNAKTLVIFIEKDCDIDLLQ---VNLGKDNSSLSQSTFFCLEENS 198
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
+ + V N + + S+ + L
Sbjct: 199 SVNHGVV--------SYGENKSNLLNSLNVIQRKNSEYNLGSLHFKFNYARFEIRITQSE 250
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ + I+ +QI + TK+ N ++K ++ S+ + G + V + A
Sbjct: 251 GNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDESHAIFEGSIIVPKIA 310
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
+ +LL+ N T P +E +H AT S+++++ LFY RGI
Sbjct: 311 QKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELFYMRSRGITLP 370
Query: 451 AAIALIVNGFVREVLQKLPM 470
A L ++ + +E++ +P+
Sbjct: 371 EASKLQLSSYFQEIISFIPV 390
>gi|269123897|ref|YP_003306474.1| SufBD protein [Streptobacillus moniliformis DSM 12112]
gi|268315223|gb|ACZ01597.1| SufBD protein [Streptobacillus moniliformis DSM 12112]
Length = 373
Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 99/283 (34%), Gaps = 10/283 (3%)
Query: 203 YIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
I ++ ++++ + I +E + +E+ H +
Sbjct: 100 RILIKGEIKEKIYITMELSKENPHLVDVFNIELEENAKAKIYIIYKGI-DNESTYHNGYI 158
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
+ A + ++ T+Q G + + +E G
Sbjct: 159 NVKANKGSNLELITIQTLNVNSENFLG--------VDIDVKEDADVKHYSVEFGGMANVT 210
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
S L ++ + +S+ ++ D + + + I ++G++ + +RG
Sbjct: 211 SVSSNLLENRAKSLLLPVYLSDMERKTDYEYTLNFHGRECVADIDARGVTKDRAIKVFRG 270
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ R ++ S S+L+ AH+IP + H A+ KI + LFY
Sbjct: 271 NLVFERFSSKSAGSESEFSILLDKTVNAHSIPTLFCDEDDVIGAHSASIGKIDQDKLFYL 330
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
+ RG ++A L+V V + E V E +++++ L
Sbjct: 331 MSRGFDSKSAKKLVVESSFGPVFNAIEDEDMVGELKEILERRL 373
>gi|312898863|ref|ZP_07758251.1| SufB/sufD domain protein [Megasphaera micronuciformis F0359]
gi|310620025|gb|EFQ03597.1| SufB/sufD domain protein [Megasphaera micronuciformis F0359]
Length = 358
Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/290 (19%), Positives = 110/290 (37%), Gaps = 18/290 (6%)
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
+G ++ PKG + + +R+ + + I A EGS
Sbjct: 79 NGCLIHAPKGSK--GTVRLIYRVEDAVPNLTAQLKIEAKEGSETEV--YLLFEGDAPTGS 134
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
+ A +A++ +Q G + R S++ + E G
Sbjct: 135 VNIAEYIEAEKDAKVTIKKIQ--------FNGDSVRHIEHRCVRAAAESEVRFVSAEMGG 186
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
A T Y L GE+S +++ + Q +D +L + + + I++ G S
Sbjct: 187 AQTILYYKVDLDGEKSKFVNHAMYVGYDQQVLDFSYWVLQKGRKSYADILTTGALTDTSK 246
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+RG + RG + S + LL+ + ++P + K H ++ +I +
Sbjct: 247 KNFRGTLDFLRGCSKSVGSETDECLLLSPKVHSVSLPLLLCKEDDVEGNHASSAGQIDKD 306
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
L+Y + RG E+ A +IV +R V+ +L E +LI L+ +
Sbjct: 307 MLYYLMSRGFSEKGAQLIIVESNIRPVIDELGDE------ELIARVLDRA 350
>gi|326792354|ref|YP_004310175.1| SufBD protein [Clostridium lentocellum DSM 5427]
gi|326543118|gb|ADZ84977.1| SufBD protein [Clostridium lentocellum DSM 5427]
Length = 247
Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 90/227 (39%), Gaps = 11/227 (4%)
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
+ + +K + + + + K +K+ T L G +
Sbjct: 31 HITLGRGSYLKLAMINEINQEEEA--------IFKLSVELEDDAKLELTTLYLGKGKNKE 82
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
+ L G+ S + + + + + H K T S ++ KG ++ ++G
Sbjct: 83 SITIYLNGDGSRCKLKAGYLIDEQTTHMMAYDVFHKGKRTISDVIVKGALQDEAHKDFKG 142
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ +GA ++ D++L+ N ++ +P + H A++ K+S + LFY
Sbjct: 143 NLYFKQGAKGAKGSEIEDAILLSPNAKSYAVPALWCDEDDIMGNHSASSGKLSKDKLFYL 202
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ RG+ EE + L+V + +L ++ VE ++ I + +G
Sbjct: 203 MSRGLSEEQSKCLMVEAELAPILDEIE---EVEMRESISNEISRRIG 246
>gi|103486163|ref|YP_615724.1| SufBD [Sphingopyxis alaskensis RB2256]
gi|98976240|gb|ABF52391.1| SufBD [Sphingopyxis alaskensis RB2256]
Length = 242
Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 6/190 (3%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
+ + G + + L G A + L E + + I G Q ++ T
Sbjct: 52 IHQIEMSIGKDATAALHILNIGGAYGRIELAVTLH-EGADFTLGAAQIGGGAQNLEIVTT 110
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
++H TSR V + + G + TY GKV+V R A + + ++L+ + A+ P
Sbjct: 111 VIHAEPGATSRQVVRSVLGGTATGTYLGKVAVARDAQQTDSEQDVKAMLLNRSATANAKP 170
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAV 474
+E H ++ L+Y RG+P A +++ FV V AV
Sbjct: 171 ELEIFADDVKCAHGCAIGELDAMALYYLESRGMPPAEAKKILLQAFVAGVFDG-----AV 225
Query: 475 EAQKLIDISL 484
+ +L +++L
Sbjct: 226 DEARLQELAL 235
>gi|330444075|ref|YP_004377061.1| ABC transporter permease [Chlamydophila pecorum E58]
gi|328807185|gb|AEB41358.1| ABC transporter permease [Chlamydophila pecorum E58]
Length = 415
Score = 144 bits (362), Expect = 5e-32, Method: Composition-based stats.
Identities = 53/314 (16%), Positives = 111/314 (35%), Gaps = 21/314 (6%)
Query: 156 GVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL- 214
GV P EA+ + V ++ A +N+ DG +YIP G ++
Sbjct: 95 GVEVFPYKEALESFA-----TFMQRLRVEEHPLAFVNAESSQDGVVIYIPDGKVIDEQIF 149
Query: 215 --STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE----NQLHAAVVELVALD 268
+ + + +++ + + + V E+ +
Sbjct: 150 VHHIIYPVARGNLLFSPKVIVVFGREACAAVHVFHHIEVDCRTVVREMMVNGVTEVFVSE 209
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
AE + + P + ++ + G + LE + + L
Sbjct: 210 KAE----AIISIDPRYAHESQFSWSHIAT--IQAGGACAVVHHLLEDARSYGLFENTFYL 263
Query: 329 RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHR 388
G+ + E S+ + ++ M H AK+TTS+ + + + G + +
Sbjct: 264 MGDYAHAE--SVVAARSPRKTWVRNLMHHDAKHTTSQQKIRSVL-DSGEFLFEGGIKITP 320
Query: 389 GAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
++ + + D+LL+ + T P +E H AT + ++ LFY RG+P
Sbjct: 321 QGEYANAYQRHDTLLLDDQARVSTYPRLEILTDEVKASHGATVGSMDEKLLFYMRSRGLP 380
Query: 449 EEAAIALIVNGFVR 462
+ A +V GF++
Sbjct: 381 LKLARERLVQGFLK 394
>gi|307297752|ref|ZP_07577558.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917012|gb|EFN47394.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
Length = 400
Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 108/284 (38%), Gaps = 16/284 (5%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
D L F++GS + IP S F + + + + E S + +
Sbjct: 112 DRKILLLGDIFFSEGSMISIPPNKSAEKSYSVAFNRDSRISSNM----FVLGENSSLKVV 167
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
Q + + + + ++ + +Y
Sbjct: 168 IDSGRFGNWLLQNN----RFLIKEGSSLELLVLNRVTERGHVFINNLYLL--------EK 215
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+K+ ++ G+A T + LL GE++ F + ++ G +D + H A +
Sbjct: 216 NAKLRVFEVNCGNASTAAFHLALLEGERALASFMPLFVARGDTVLDMQYVVRHRANWSEG 275
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
RI G+ S + +RG + + RGA + + L++ + A TIP + + +
Sbjct: 276 RISGSGVLLDNSRSVFRGTIDIKRGAKGVKGSEYSNILMLSESARADTIPSLLVGENQVD 335
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H AT I + LFY + RG+ + ++++IV G L+++
Sbjct: 336 AFHAATVGSIDAQKLFYLMSRGLTRDQSMSIIVQGKFEPTLREI 379
>gi|33519821|ref|NP_878653.1| cysteine desulfurase activator complex subunit SufD [Candidatus
Blochmannia floridanus]
gi|33504166|emb|CAD83428.1| required for stability of iron-sulfur component of FhuF [Candidatus
Blochmannia floridanus]
Length = 433
Score = 143 bits (360), Expect = 8e-32, Method: Composition-based stats.
Identities = 64/427 (14%), Positives = 141/427 (33%), Gaps = 31/427 (7%)
Query: 67 TMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILA 126
K P +++ + ++ + + + Y I + I
Sbjct: 20 KKKHPEFSKKNNNYWE-QNIIKFNESYHAIN-DPWKYFP--IEEFYNNQFILNEDAAINL 75
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
+ V + F L + + +L Y +T P+
Sbjct: 76 STYNKLRLNIDCYRLVFINGQFSCTLSDLNINP----WILKIDNNL--NYWNTSKPIRPT 129
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVS---- 242
+ L + + +P+ L + + T L ++ Y+
Sbjct: 130 MFLYLTEYLSDVVIRITLPEKKITKKPLYLLYINSGSDT---PNALAMSHSYHYLETGQN 186
Query: 243 ---YLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
Y+ + + + + + ++ + + Y+ +
Sbjct: 187 TDAYVIEHVVNINEYAHFSGSRMLMSIGNKSKFNHVKL-------ILKNQSSYHISHQDM 239
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
S T + GS T+ S + +S S+ I + + T + H
Sbjct: 240 HINSCSDVHSNTFVIAGSKFTYHQISSKINYSESSISLNSLTILSERNISNMRTYIEHNN 299
Query: 360 KNT-TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+N SR + K I++ +S + G + V+ + + ++LL+ +TIP +E
Sbjct: 300 QNCSISRQLHKIIASDYSTGIFDGLIKVNPHSIKTDGKMINNNLLLNKTASIYTIPKLEI 359
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQK 478
+ S H +T I HLFY RGI ++ AI ++++ F E ++K+ + QK
Sbjct: 360 YSDSVQCNHGSTVGHIDLNHLFYLSTRGISKKDAIKMLIDAFTIENIKKI---QNLSLQK 416
Query: 479 LIDISLE 485
+I ++
Sbjct: 417 IIADKIK 423
>gi|15639601|ref|NP_219051.1| hypothetical protein TP0613 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025839|ref|YP_001933611.1| hypothetical protein TPASS_0613 [Treponema pallidum subsp. pallidum
SS14]
gi|3322911|gb|AAC65589.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018414|gb|ACD71032.1| hypothetical protein TPASS_0613 [Treponema pallidum subsp. pallidum
SS14]
gi|291059985|gb|ADD72720.1| FeS assembly protein SufD [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 382
Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 104/284 (36%), Gaps = 22/284 (7%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN---------- 255
+ + F ++ +++T + EG+ V L A
Sbjct: 88 PRTSETVHVLIRFTMDTHNRVLYDQTFLDIQEGARVKVLVCVDAQGYTPQDAPALVGPQA 147
Query: 256 ----QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+V + A ++ VQN NF T + +++
Sbjct: 148 LERAPFRNGLVSVQVGRGASVELIKVQN-------THPTAVNFETVHLHAQ-ESAQVRCY 199
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
++ G+ I+ S LR E + E + + + +++D ++ KN+ + I + G+
Sbjct: 200 DVQIGAQISGVSNSAFLRDEWARVEIHPLYFIDKARRMDLEHNLIVEGKNSHAHICACGV 259
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
+ T+RG + +HRG +HS ++L+ +IP I EH A+
Sbjct: 260 VKDGARKTFRGNIFLHRGCSHSVARFSDRTILLDRTAVGVSIPTIFCDEDDVVGEHAASF 319
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
I + L+Y + RG+ E A LI+ + V + E
Sbjct: 320 ETIGSDVLYYLMSRGLDEYGAKRLIIEAAFKPVFALIDDAHIRE 363
>gi|183221302|ref|YP_001839298.1| hypothetical protein LEPBI_I1919 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911393|ref|YP_001962948.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776069|gb|ABZ94370.1| Permease component of an ABC transporter complex, Fe-S cluster
assembly [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779724|gb|ABZ98022.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 387
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 66/165 (40%)
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + G + + L G+ + ++ + D +M+H A +TT
Sbjct: 201 ENASVKLHHFPFGGFRSKLFLHSHLLGKGAEVTIDGVSALSKRNLKDLDMEMIHHADHTT 260
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S+I K I S++ + G + + + +L + A P +E
Sbjct: 261 SKISYKTIVTDRSHHIFTGNLIIPPNLKKVVAHQESFNLSLNKKARAEANPKLEVLAEDV 320
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
+ H AT I +E FY L RG+ E + +L+V F E +Q++
Sbjct: 321 SCTHGATVGDIDEEQYFYLLSRGLSPEESKSLLVTAFYGETIQRI 365
>gi|160902127|ref|YP_001567708.1| SufBD protein [Petrotoga mobilis SJ95]
gi|160359771|gb|ABX31385.1| SufBD protein [Petrotoga mobilis SJ95]
Length = 405
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/278 (18%), Positives = 94/278 (33%), Gaps = 13/278 (4%)
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+ A G ++ +G + TY +E ++ S + +
Sbjct: 122 MAEAFSNTGFYLKTNEGEEREPIILTYDW----KFPIYETSVYNISPFSKATVIRYLMPS 177
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ ++ + +V +NA ++ + N DS +
Sbjct: 178 KNEKLFRTTS-NRIVVKENASLELINI-NLCNDDSLSIDNT-------LIEVQKNGNVEV 228
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+ G IT + L GE + Y + + ID M + TT I +KG
Sbjct: 229 VDINIGGRITSPHIVFRLAGEGAQAHLYPYFLGDKDNVIDMLYLMRFYSPETTGAIDAKG 288
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+ S +RG + + +GA + +L + A P + + N H AT
Sbjct: 289 VIKDESKAIFRGFLDLKKGAKEANASESEYTLTLSEKAKAEAFPSLLVDENEVNAAHAAT 348
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
I E L+Y + RG E A LI +G + ++
Sbjct: 349 VGTIEKEKLYYLMTRGFSLEEAKKLISSGLFESAIDRI 386
>gi|56551322|ref|YP_162161.1| SufBD protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753059|ref|YP_003225952.1| SufBD protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56542896|gb|AAV89050.1| SufBD protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552422|gb|ACV75368.1| SufBD protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 371
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 16/267 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ C + + G + + + + +E
Sbjct: 102 LEIEEDCAEPIEILYL--GSGGAYHLPSSVRLAKNVSATLVE-----TYAGQGWGNRFSY 154
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+NA+ +Q +G G + + G + + + A +
Sbjct: 155 FDLGENAQ-----LQRLSRLSCEG--GFTSLI--EEGRLGENAHLLTDWIGNKGADSRID 205
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
L + ++ Q+ D H+A+ SR + ++ S + +
Sbjct: 206 QRFDLTASGAELMSGGAFLAREKQRHDIMIITRHIAEGCRSRQKLRALADDESTVSLAVR 265
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V A S LL+ N + P +E H A ++ + LFY
Sbjct: 266 TEVAASAQKSDGEQSLKGLLLSRNATINMKPELEIYADDVKCAHGAAVGELDPQALFYLE 325
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPM 470
RGI E A L++ FV E P
Sbjct: 326 SRGIDPEEAKDLLIQSFVMEAFISTPD 352
>gi|241760975|ref|ZP_04759064.1| SufBD protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241374594|gb|EER64055.1| SufBD protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 371
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 16/267 (5%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ C + + G + + + + +E
Sbjct: 102 LEIEEDCAEPIEILYL--GSGGAYHLPSSVRLAKNVSATLVE-----TYAGQGWGNRFSY 154
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+NA+ +Q +G G + + G + + + A +
Sbjct: 155 FDLGENAQ-----LQRLSRLSCEG--GFTSLI--EEGRLGENAHLLTDWIGNKGADSRID 205
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
L + ++ Q+ D H+A+ SR + ++ S + +
Sbjct: 206 QRFDLTASGAELMSGGAFLAREKQRHDIMIITRHIAEGCRSRQKLRALADDESTVSLAVR 265
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
V A S LL+ N + P +E H A ++ + LFY
Sbjct: 266 TEVAASAQKSDGEQSLKGLLLSRNATINMKPELEIYADDVKCAHGAAVGELDPQALFYLE 325
Query: 444 QRGIPEEAAIALIVNGFVREVLQKLPM 470
RGI E A L++ FV E P
Sbjct: 326 SRGIDPEEAKDLLIQSFVMEAFISTPD 352
>gi|227523798|ref|ZP_03953847.1| conserved hypothetical protein [Lactobacillus hilgardii ATCC 8290]
gi|227089113|gb|EEI24425.1| conserved hypothetical protein [Lactobacillus hilgardii ATCC 8290]
Length = 121
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S + G + GA ++ + L++ P + + H A+
Sbjct: 1 MLDSSTLIFNGVGKIIHGAHGAKAQQENRVLMLSPKAHGDANPILLIDENDVVAGHAASV 60
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQKLIDISLEGSVG 489
+I+ + L+Y + RG+ ++ A L+V GF+ VL+ +P+ E ++++ L G
Sbjct: 61 GQINKKQLYYLMSRGLSKKVAKRLVVRGFLGVVLRDIPVADVREQMVEMMERKLSNEQG 119
>gi|14915779|gb|AAK73804.1| ORF470 [Eimeria reedi]
Length = 234
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 108/215 (50%), Positives = 137/215 (63%), Gaps = 1/215 (0%)
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
Q S +AVD V DSVS+V T L K+GVIFMP E+I P LV YL T+V
Sbjct: 15 QNTQESNTISTLAVDVVLDSVSIVDTITSFLIKTGVIFMPFFESINYFPSLVFSYLGTIV 74
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
+ DNF+A LNS +F+ GSF +I K ++C + LSTYFR + QFERTL+I + V
Sbjct: 75 SLEDNFFATLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFERTLLIVGSSASV 134
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDC 301
Y EGC+AP E+QLH A+VE++ + + YSTVQNWY GD G+GG+YNF TKRG C
Sbjct: 135 VYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTVQNWYRGDQSGEGGLYNFTTKRGWC 194
Query: 302 RGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
++ + W Q+E GSAITWKYPS L GE S
Sbjct: 195 L-KKASLDWVQIEMGSAITWKYPSTYLIGEVSSSN 228
>gi|152992590|ref|YP_001358311.1| Fe-S cluster assembly protein SufD [Sulfurovum sp. NBC37-1]
gi|151424451|dbj|BAF71954.1| Fe-S cluster assembly protein SufD [Sulfurovum sp. NBC37-1]
Length = 397
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/377 (13%), Positives = 119/377 (31%), Gaps = 17/377 (4%)
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
D +L LGIP ++ E + V + KE + ++ +
Sbjct: 21 DEHTAILERLHTLGIPTKKGEAYRYFDIESLLAKEYHTLDYVPKSIKES-DRVEIVDGTV 79
Query: 163 SEAICEHPDLVKKYLSTVVPVGD-NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN 221
A + V+ + + L + + I R
Sbjct: 80 ISAPKGMRIFYE--ACKVIDMEHFDPLYYLGHLLVPHVIKIEIDGDAHVE----IVHRFT 133
Query: 222 EKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWY 281
+ R ++ + + E + + ++ ++ ++ Q
Sbjct: 134 QSNALINYRIVLENQSNRHATINETFEDANISGSLVLYG-HDVRIAPDSTLRMLKTQTLQ 192
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
P + Y V G + + + G + + L E++ + +
Sbjct: 193 PEN-------YAIVASHSIQVGRNANAIFKSFDFGGGLGLQLIKMELD-ERAHAQAGHLL 244
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
N + + ++++H ++TS +K I G + + + V A +++ +
Sbjct: 245 YLNSDARRGTVSQIVHKGMHSTSSQEAKNILDGSARGIFDALIKVEHSARYTKAHQNSKA 304
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
+L+ P +E H +TT ++ + LFY RGI A ++V F
Sbjct: 305 ILLDERAYMAAKPQLEIYIDELEASHGSTTGQLDKKQLFYLQSRGISATEARKMLVIAFA 364
Query: 462 REVLQKLPMEFAVEAQK 478
+++K+ E K
Sbjct: 365 NTLIEKVKDSRQQERIK 381
>gi|126695420|ref|YP_001090306.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
gi|126542463|gb|ABO16705.1| ABC transporter, membrane component [Prochlorococcus marinus str.
MIT 9301]
Length = 405
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 11/259 (4%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ F + + +I ++ V L+ ++N + +N+
Sbjct: 143 IPPIEVFSHASSNSLNAKTLIIFLEKNCNVELLQ---VNLGEDNSSLSQSTFFSLEENSS 199
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+ + V N + + S+ + L +
Sbjct: 200 LNHGVV--------SYGVNESNLLNSLNVIQQKNSEYNLGSLHSKFNYARFEIRIKQSEG 251
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ + I+ +QI + TK+ N ++K ++ S+ + G + V + A
Sbjct: 252 NAKTNIKGMQITKKDEQISTYTKIDFDGPNGFLDQINKSLADDKSHAIFEGSIIVPKIAQ 311
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ +LL+ N T P +E +H AT S++++E LFY RGI
Sbjct: 312 KTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLTE 371
Query: 452 AIALIVNGFVREVLQKLPM 470
A L + + +E++ +P+
Sbjct: 372 ASKLQLTSYFQEIISFIPV 390
>gi|330684727|gb|EGG96423.1| FeS assembly protein SufD family protein [Staphylococcus
epidermidis VCU121]
Length = 253
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 18/249 (7%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
++E+ + S NEP WM E R A + T++ P + + DFD +
Sbjct: 8 ISEEQLVDYSKAHNEPSWMTELRNKALKLTETLEMPKPDKTKLRKWDFDSFKQH--HTEG 65
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
QSL+++ + + I + E L + +A T E+ K
Sbjct: 66 SVYQSLEELPESVKK-----IIDVENTENLVIQHNNDLA----------YTQVSEQAKND 110
Query: 156 GVIFMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVI +SEA+ H DLV+KY T V V ++ AL++A+ G FVY+PK V +
Sbjct: 111 GVIIEGLSEALVNHSDLVQKYYMTDAVNVDEHRLTALHTALMNGGVFVYVPKNVVVEHPV 170
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+++ T + +I+ ++ + V+Y+E + E V E++A N+ I Y
Sbjct: 171 QYVVLHDDENTSFYNHVIIVTEQSAEVTYVENYLSNASGEGNQINIVSEVIAGANSNITY 230
Query: 275 STVQNWYPG 283
+V G
Sbjct: 231 GSVDYLDKG 239
>gi|304436800|ref|ZP_07396768.1| iron ABC superfamily ATP binding cassette transporter, membrane
component [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370280|gb|EFM23937.1| iron ABC superfamily ATP binding cassette transporter, membrane
component [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 283
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 9/226 (3%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+E+ D AE+ + +Q P D+ I+ V G S T +E G+ T
Sbjct: 61 IEVTVADGAELSLTYIQ-LAPTDAPAASRIHAAV-------GKGGCFSCTLVEAGAQHTA 112
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L G+Q+C + + + + ++ID + ++T + + +G G +R
Sbjct: 113 SELQVRLAGDQACTDVWGLYFGDDERKIDLNYIIRQEGQHTDANMQVRGALLGHCVKNFR 172
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + +GA S + ++ + ++P + S + H + ++ + LFY
Sbjct: 173 GTLDFIQGARGSVGKEDEEVTILSPHARNRSVPLMLSHEGDVDGHHAVSIGRMDADKLFY 232
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLEG 486
+ RG+ E AA LIV VL ++ E E ++ L G
Sbjct: 233 LMSRGLDERAAQQLIVEASFAPVLMRITDEKLRTEIGDYLERRLLG 278
>gi|257075582|ref|ZP_05569943.1| ABC transporter ATP-binding protein [Ferroplasma acidarmanus fer1]
Length = 404
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/389 (18%), Positives = 146/389 (37%), Gaps = 27/389 (6%)
Query: 84 DDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEI---LAGVQTSKVAVDAVFD 140
YY +S D +TY + E+ L+ + +D+ +D
Sbjct: 23 QAYIYYLKYPDPPYKESPD------KKTYVNITEKDLERMAYGELSVSIKKEEKIDSNYD 76
Query: 141 SVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGS 200
V + F +K V + A E DL KKY+ + + Y L + + +G
Sbjct: 77 LVVTDSDFIISRQKKEVYISNMKTAFEEKKDLFKKYVDQQLGKYNREY--LINFSYENGY 134
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
F++ P +++ + + + +II + + V + N +H
Sbjct: 135 FIHFPDNTTNDVKIESI---QDSNASFAFKNVIIVGKNASVEITDVYKKHN-KGNGVHGR 190
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ + + + +KY+ VQ+ +T S+I + G+
Sbjct: 191 NIYIFCGEGSHVKYNYVQDEGEDTVN--------LTYVRPVLYRDSEIRIIDVNAGANKV 242
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ + + + + Y + +S G Q++D + K + I KG+ S+ +
Sbjct: 243 FYNHESEMY-DNTTMKSYGVNVSRGDQEMDIWDSSVQYGKYSNCDINIKGVVLDRSSTMH 301
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
RG + + S F LL+ N ++ P + KN+ +H ++ S + E +F
Sbjct: 302 RGNIDIEPEGVKSSGFYGSAILLMSENGKGNSKPALLIKNNDTKSKHSSSISSLDPEQIF 361
Query: 441 YCLQRGIPEEAAIALIVNGF---VREVLQ 466
Y RG+ E A +I+NGF + ++
Sbjct: 362 YLRSRGLSEAEATDMIINGFTGYIEDITD 390
>gi|70953808|ref|XP_745982.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526469|emb|CAH77556.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 1339
Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 95/245 (38%), Gaps = 10/245 (4%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R ++ E S ++ E + + + A + N+++ + Q
Sbjct: 1074 NPRLVLYIKENSKINIHESHISLNDNNGGMVNAFSRIYLEQNSKVNHILSQELGK----- 1128
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
++ F G+ + + + GS + + + Y +++ G Q
Sbjct: 1129 --NVWYFHNV-SVQNGINANYKFVDILLGSLSSRVNLQIEGN-QGCKQQSYGLSLLEGKQ 1184
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
I H + + + K + + +++ +R + + R A ++ T C S+L+
Sbjct: 1185 NISQYEMFHHEHPSMQTDQLFKSLVSDTAHSVWRSRGRIERNAIKAKLNTLCRSVLLNLG 1244
Query: 408 CGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
A IP +E S H AT S + E +F + RGI + A +++ FV E+L+
Sbjct: 1245 ASAVAIPTLEIIPSDIEEANHGATISDLEQEPIFSLMSRGIDTKIARQIMMKAFVNEILE 1304
Query: 467 KLPME 471
+P E
Sbjct: 1305 HIPDE 1309
>gi|307244483|ref|ZP_07526592.1| SufB/sufD domain protein [Peptostreptococcus stomatis DSM 17678]
gi|306492176|gb|EFM64220.1| SufB/sufD domain protein [Peptostreptococcus stomatis DSM 17678]
Length = 276
Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 9/239 (3%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I A+EG VS L H V+ + A ++ + V + +
Sbjct: 33 IKAEEGQEVSALFDTNEMAGPGASRHT-VINIRAEKDSTVNIYYVSRSHEEEKA------ 85
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+T ++++ Q+E G+ L G++S ++ ++G +++D
Sbjct: 86 --LTDIRADVMESARVNLIQIEAGAKDVVTNYVANLIGDKSSTNVEAVYFADGDKRVDIF 143
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ + K T S I+ G + T++G + RG+ S + + L+ + +
Sbjct: 144 YNINQMGKETDSNILVNGALKDRAKKTFKGTIDFKRGSLGSTGSEEEFATLLDDEVRSIA 203
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+P + + H A+ KI + LFY + RGI EE A +IV + + KLP E
Sbjct: 204 VPVLLCQEDDVEGVHAASAGKIDQDTLFYIMSRGINEEEAKKVIVETKLAPTIHKLPDE 262
>gi|82753351|ref|XP_727643.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483585|gb|EAA19208.1| Uncharacterized protein family UPF0051, putative [Plasmodium yoelii
yoelii]
Length = 1347
Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats.
Identities = 46/254 (18%), Positives = 97/254 (38%), Gaps = 10/254 (3%)
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
+ R ++ E S ++ E + + + A + N+++ + Q
Sbjct: 1073 TNSTHNPVTNPRLVLYIKENSKINIHESHISLNNNNGGMVNAFSRIYLEQNSKVNHILSQ 1132
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
++ F G+ S + + GS + + + Y
Sbjct: 1133 ELGK-------NVWYFHNV-SVQNGINSNYKFVDILLGSLSSRVNLQIEGN-QGCKQQSY 1183
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+++ G Q I H + + + K + + +++ +R + + R A ++ T
Sbjct: 1184 GLSLLEGKQNISQYEMFHHEHPSMQTDQLFKSLVSDTAHSVWRSRGRIERNAIKAKLNTL 1243
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
C S+L+ A IP +E S H AT S + +E +F + RGI + A +++
Sbjct: 1244 CRSVLLNLGASAVAIPTLEIIPSDIEEANHGATISDLEEEPIFSLMSRGIDTKIARQIMM 1303
Query: 458 NGFVREVLQKLPME 471
FV E+L+ +P E
Sbjct: 1304 KAFVNEILEHVPDE 1317
>gi|315636031|ref|ZP_07891290.1| FeS assembly protein SufD [Arcobacter butzleri JV22]
gi|315479687|gb|EFU70361.1| FeS assembly protein SufD [Arcobacter butzleri JV22]
Length = 343
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 90/266 (33%), Gaps = 10/266 (3%)
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
+ + E T I E S +E + +V N
Sbjct: 77 INEPIILIHNMKEDETFFTNSLRIEVKENIKASIIELFVNSSNNSCFAVNR--NIVLEKN 134
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A ++Y +Q+ F T + S + + E G ++
Sbjct: 135 ASLEYVKIQDIDL------SNSMIFATSCE--QNENSNLEISNFEFGEGFIVNSFENIIN 186
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
E E + + K +H KN+TS + K S + K V++
Sbjct: 187 KEFINYELNGLTKLKDSSNTSTLVKTIHNEKNSTSFVNYKNSLKDKSRAVIKIKSIVNQN 246
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A ++ F C+++L+ ++ P++E H TT +++E L Y RGI +
Sbjct: 247 AQFTKAFQNCNTILLSDDATIFAQPHLEIYIDELEASHGTTTGTLNEEQLLYLQSRGIRK 306
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVE 475
E A +++N F + + E E
Sbjct: 307 EKAYDMLLNAFESSIKDNIKDEKIKE 332
>gi|213855086|ref|ZP_03383326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
Length = 83
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 69/82 (84%)
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+G NCGAHT PY+E +N+S LEHEATTS+I ++ LFYCLQRGI EE AI++IVNGF ++
Sbjct: 1 MGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKD 60
Query: 464 VLQKLPMEFAVEAQKLIDISLE 485
V +LP+EFAVEAQKL+ ISLE
Sbjct: 61 VFSELPLEFAVEAQKLLAISLE 82
>gi|124803454|ref|XP_001347720.1| iron-sulfur assembly protein, sufD, putative [Plasmodium falciparum
3D7]
gi|23495970|gb|AAN35633.1| iron-sulfur assembly protein, sufD, putative [Plasmodium falciparum
3D7]
Length = 1462
Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/306 (16%), Positives = 111/306 (36%), Gaps = 16/306 (5%)
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+ + K ++ V+ D+ + K ++L+ Y N
Sbjct: 1150 EKEESIQKCHMEKVISSHDDTI---QNCDIEKNECKENKKSKYTQIKLTEYHTHNP---I 1203
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
R ++ S ++ E + + + L + + + +K++ Q
Sbjct: 1204 TNPRLVVYVKGNSKINIYESHISLNKSNSGLVNGFSRICLEEKSNVKHTLSQELG----- 1258
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
+++F G+ + + + GS + + E Y +++
Sbjct: 1259 --NNVWHFHNV-SVKNGLNANYKFVDVLLGSLSSRINLQIE-GEKGCKQESYGLSLLEDK 1314
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q I H + + + K + + ++ +R + + R A ++ T C S+L+
Sbjct: 1315 QNISQYEMFHHEHPSMETNQLFKCLVSDKAHAVWRSRGRIERNAIKAKLNTLCKSILLNF 1374
Query: 407 NCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A IP +E S H AT S + E +F + RGI E A +++N FV+E+L
Sbjct: 1375 GASAVCIPTLEIIPSDIECANHGATISDLEKEPIFSLMTRGISERNAREIMMNSFVKEIL 1434
Query: 466 QKLPME 471
+ E
Sbjct: 1435 DHISDE 1440
>gi|14915769|gb|AAK73799.1| ORF470 [Eimeria arizonensis]
Length = 233
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 106/220 (48%), Positives = 142/220 (64%), Gaps = 6/220 (2%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
EK+G+ +E ++ +AVD V DSVS+V T L K+GVIFMP E++ P
Sbjct: 9 LEKIGLNTKENNTIS-----TLAVDVVLDSVSIVDTVTSFLIKTGVIFMPFFESLNCFPS 63
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
LV Y+ T+V + DNF+A LNS +F+ GSF +I K ++C + LSTYFR + QFERT
Sbjct: 64 LVFSYVGTIVSLEDNFFATLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFERT 123
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + V Y EGC+AP E+QLH A+VE++ + + YSTVQNWY GD G+GG+
Sbjct: 124 LLIVGSSATVIYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTVQNWYRGDQSGEGGL 183
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
YNF TKRG C + + W Q+E GSAITWKYPS L G+
Sbjct: 184 YNFTTKRGWCL-KNASLDWVQIEMGSAITWKYPSTYLIGD 222
>gi|303228927|ref|ZP_07315737.1| SufB/sufD domain protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516341|gb|EFL58273.1| SufB/sufD domain protein [Veillonella atypica ACS-134-V-Col7a]
Length = 348
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 91/262 (34%), Gaps = 9/262 (3%)
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ R I +EG+ V + E + E NA+I
Sbjct: 87 EVVGIRIDASARIASRFQFIVEEGADVEV-QFFLDGGTKEATNIQYLNEYDVKSNAKIVV 145
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V + R + + + +E G + L+GE S
Sbjct: 146 KKVNLLDE--------TVQHIEHRYTKLEDNADVEYINVEIGGKENFLNYEHDLQGESSK 197
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ N Q+ D M H K + S I + G + S ++RG + RGA S
Sbjct: 198 IVHDIAYLGNKEQKFDIAMLMTHGGKKSFSDIHTLGALSDTSKKSFRGTLDFLRGAVASE 257
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ LL+ + ++P + K + H A+ +I LFY + RG E A
Sbjct: 258 GAEEDTCLLLDPTVKSISLPLLLCKEDNVVGNHAASAGQIDQNKLFYLMSRGFSEVEAKH 317
Query: 455 LIVNGFVREVLQKLPMEFAVEA 476
+IV +R ++ ++ + EA
Sbjct: 318 IIVESMIRPIIDRIGDDVIEEA 339
>gi|169350361|ref|ZP_02867299.1| hypothetical protein CLOSPI_01128 [Clostridium spiroforme DSM 1552]
gi|169293144|gb|EDS75277.1| hypothetical protein CLOSPI_01128 [Clostridium spiroforme DSM 1552]
Length = 297
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 4/206 (1%)
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D+Q I N S + +E ++ + L E + ++
Sbjct: 95 DNQSTFNI-NAKVIENVKVMQDSDVKCAYVELSNSNIEMDVNYSLVKENANANIRLATLA 153
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+ ++H A TT + + G++ ++ G + +G S + ++
Sbjct: 154 KEKENKHITISIVHEAPYTTGIMNNYGVTKNEASLVIDGIGRIKKGNCQSNSHQANKIIV 213
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
C A PY+ H A+ KI +EHL+Y RG+ +E A+ L+ G+
Sbjct: 214 FDKLCKAKANPYLYIDEYDVKASHGASVGKIDEEHLYYLQSRGLSKEDAMHLVTYGYFMP 273
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
VL+ + E ++L + L+ VG
Sbjct: 274 VLEFID---NDELKELFNEMLKEKVG 296
>gi|303231998|ref|ZP_07318704.1| SufB/sufD domain protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513328|gb|EFL55364.1| SufB/sufD domain protein [Veillonella atypica ACS-049-V-Sch6]
Length = 348
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 91/262 (34%), Gaps = 9/262 (3%)
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ R I +EG+ V + E + E NA+I
Sbjct: 87 EVVGIRIDASARIASRFQFIVEEGADVEV-QFFLDGGTKEATNIQYLNEYDVKSNAKIVV 145
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V + R + + + +E G + L+GE S
Sbjct: 146 KKVNLLDE--------TVQHIEHRYTKLEDNADVEYINVEIGGKENFLNYEHDLQGESSK 197
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ N Q+ D M H K + S I + G + S ++RG + RGA S
Sbjct: 198 IVHDIAYLGNKEQKFDIAMLMTHGGKKSFSDIHTLGALSDTSKKSFRGTLDFLRGAVASE 257
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ LL+ + ++P + K + H A+ +I LFY + RG E A
Sbjct: 258 GAEEDTCLLLDPTVKSISLPLLLCKEDNVVGNHAASAGQIDQNKLFYLMSRGFSEVEAKH 317
Query: 455 LIVNGFVREVLQKLPMEFAVEA 476
+IV +R ++ ++ + EA
Sbjct: 318 IIVESMIRPIIDRIGDDVIEEA 339
>gi|241895315|ref|ZP_04782611.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Weissella paramesenteroides ATCC
33313]
gi|241871289|gb|EER75040.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Weissella paramesenteroides ATCC
33313]
Length = 387
Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats.
Identities = 67/337 (19%), Positives = 119/337 (35%), Gaps = 18/337 (5%)
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
ELK G + + + L K+ + + N Y + G + IP V
Sbjct: 61 ELKHHGGTIVR----LEDEAQLSKQVTAYIQKHQTNKYIVQHFQQPLVGLKIMIPDHVVI 116
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
L+ ++I EGS ++ + + + V+ DN+
Sbjct: 117 KQPLNLT-IDLRDAQPIALTIVLILGEGSQLTLQQAININGQVA--HASCVIIGHQADNS 173
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++K T + N W+ + L G
Sbjct: 174 QLKLMT--------ALSNQMPINLSLFGELDVARDCVADWSLVPGAYGKLLGDVVVNLNG 225
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ S + ++ I G + HLA +TTSRI +G+ G S + ++ GA
Sbjct: 226 QGSTAKLNAVKIGIGQDYSGFQGCVNHLATHTTSRINMRGVLFGQSKVNFTSVGQIYHGA 285
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
S + + + +G + P + + N H A+ + E L+Y L RGI E+
Sbjct: 286 YGSDSQQEGRLMTVGKSAQGTVNPLLIIDENDVNAGHAASVGQYDPEELYYLLSRGITEQ 345
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
A ++V F+ VL +L + QK+I EG+
Sbjct: 346 QARKILVYDFIAPVLHELTDDLQ---QKVIAAVEEGA 379
>gi|14915767|gb|AAK73798.1| ORF470 [Eimeria albigulae]
Length = 233
Score = 139 bits (351), Expect = 8e-31, Method: Composition-based stats.
Identities = 106/223 (47%), Positives = 144/223 (64%), Gaps = 6/223 (2%)
Query: 114 KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLV 173
K+G+ +E +++ +AVD V DSVS+V T L K+G+IFMP E++ P LV
Sbjct: 11 KIGVNAQENNMIS-----TLAVDVVLDSVSIVDTVTSFLIKTGIIFMPFFESLNYFPSLV 65
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
Y+ T+V + DNF+A LNS +F+ GSF +I K ++C + LSTYFR + QFERTL+
Sbjct: 66 FSYVGTIVSLEDNFFATLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQAEDFAQFERTLL 125
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I + V Y EGC+AP E+QLH A+VE++ + + YSTVQNWY GD G+GG+YN
Sbjct: 126 IVGSSATVIYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTVQNWYRGDQSGEGGLYN 185
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
F TKRG C +S + W Q+E GSAITWKYPS L G+ S
Sbjct: 186 FTTKRGWCL-KKSSLDWVQIEMGSAITWKYPSTYLIGDHSASN 227
>gi|238926308|ref|ZP_04658068.1| possible iron-regulated ABC superfamily ATP binding cassette
transporter [Selenomonas flueggei ATCC 43531]
gi|238885988|gb|EEQ49626.1| possible iron-regulated ABC superfamily ATP binding cassette
transporter [Selenomonas flueggei ATCC 43531]
Length = 283
Score = 139 bits (351), Expect = 8e-31, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 9/226 (3%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+E++ D AE+ + +Q P D+ I+ V G + S T +E G+ T
Sbjct: 61 IEVMVADGAELSLTYIQ-LAPTDAPAASRIHAAV-------GKGGRFSCTLVEAGAQHTA 112
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L G+Q+C + + + + ++ID + ++T + + +G G +R
Sbjct: 113 SELQVTLVGDQACTDVWGLYFGDDARKIDLNYIIRQEGQHTDANMQVRGALLGHCVKNFR 172
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + +GA S + +++ + ++P + S + H + ++ + +FY
Sbjct: 173 GTLDFIQGARGSVGKEDEEVMILSPHAHNRSVPLMLSHEGDVDGHHAVSIGRMDADKMFY 232
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLIDISLEG 486
+ RG+ E AA LIV VL ++ E E ++ L G
Sbjct: 233 LMSRGLDERAAQQLIVEASFSPVLARITDETLRTEIGDYLERRLLG 278
>gi|14915775|gb|AAK73802.1| ORF470 [Eimeria onychomysis]
Length = 233
Score = 139 bits (351), Expect = 9e-31, Method: Composition-based stats.
Identities = 107/233 (45%), Positives = 146/233 (62%), Gaps = 10/233 (4%)
Query: 108 LLRTYE----KLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPIS 163
+ T+ KLG+ +E ++ +AVD V DSVS+V T L K+G+IFMP
Sbjct: 1 ITNTFNSILGKLGLNAQENNTIS-----TLAVDLVLDSVSIVDTVTSFLIKTGIIFMPFF 55
Query: 164 EAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEK 223
E++ P LV Y+ T+V + DNF+A LNS +F+ GSF +I K ++C + LSTYFR +
Sbjct: 56 ESLNFFPSLVFSYVGTIVSLEDNFFATLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQSE 115
Query: 224 GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
QFERTL+I + V Y EGC+AP E+QLH A+VE++ + + YSTVQNWY G
Sbjct: 116 DFAQFERTLLIVGSSATVIYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTVQNWYRG 175
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
D G+GG+YNF TKRG C ++ + W Q+E GSAITWKYPS L G+ S
Sbjct: 176 DQSGEGGLYNFTTKRGWCL-KKASLDWVQIEMGSAITWKYPSTYLIGDYSASN 227
>gi|320537861|ref|ZP_08037776.1| SufB/sufD domain protein [Treponema phagedenis F0421]
gi|320145280|gb|EFW36981.1| SufB/sufD domain protein [Treponema phagedenis F0421]
Length = 364
Score = 139 bits (351), Expect = 9e-31, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 213 ELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTA-PQRDENQLHAAVVELVALDNAE 271
E+ +F +++ + F+++ I +EG+ + + ++ + A N+E
Sbjct: 94 EVFIHFSFDDENSVLFDQSYIEIEEGAQAKIFFYLDSKTIPETAIFRNGLITVRAGKNSE 153
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
+++ VQN P NF T + G +S + ++ G S ++ E
Sbjct: 154 LEFIKVQNITPTG-------TNFETMK-IDAGKKSAVRLYDIQLGGKTVGVSNSTYMKEE 205
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ + Y + ++ +++D + +N+ I ++G + +RG + +++G +
Sbjct: 206 WADVQIYPLYFADNDRRMDLEQNFIINGQNSHGLIAARGALKNTAKKIFRGNIFLNKGCS 265
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
HS +++++ +IP I EH A+ I + L+Y + RG E +
Sbjct: 266 HSIARFSDNTIMLNKTAVGTSIPTIFCDEDDVVGEHAASFEAIDGDKLYYLMTRGFDEFS 325
Query: 452 AIALIVNGFVREVLQKLPM 470
A LI+ + V +
Sbjct: 326 AKKLIIEAAFKPVFAMIED 344
>gi|157736860|ref|YP_001489543.1| Fe-S assembly protein [Arcobacter butzleri RM4018]
gi|157698714|gb|ABV66874.1| Fe-S assembly protein [Arcobacter butzleri RM4018]
Length = 343
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 90/266 (33%), Gaps = 10/266 (3%)
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
+ + E T I E S +E + +V N
Sbjct: 77 INEPIILIQNMKEDETFFTNSLRIEVKENIKASIIELFVNSSNNSCFAVNR--NIVLEKN 134
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A ++Y +Q+ F T + S + + E G ++
Sbjct: 135 ASLEYVKIQDIDL------SNSMIFATSCE--QNENSNLEISNFEFGEGFIVNSFENIIN 186
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
E E + + K +H KN+TS + K S + K V++
Sbjct: 187 KEFINYELNGLTKLKDSSNTSTLVKTIHNEKNSTSFVNYKNSLKDKSRAVIKIKSIVNQN 246
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A ++ F C+++L+ ++ P++E H TT +++E L Y RGI +
Sbjct: 247 AQFTKAFQNCNTILLSDDATIFAQPHLEIYIDELEASHGTTTGTLNEEQLLYLQSRGIRK 306
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVE 475
E A +++N F + + E E
Sbjct: 307 EKAYDMLLNAFESSIKDNIKDEKIKE 332
>gi|13661022|emb|CAC37008.1| Pps1 protein [Mycobacterium gastri]
Length = 534
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 109/191 (57%)
Query: 91 APKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKE 150
A + + D + E ++ E + + G V +S V +E
Sbjct: 344 AHGTTIRAHCNDWLGFERVKAVEPYAVEPVYDIEVDGPHNFVAEGLVVHNSEVVYHQIRE 403
Query: 151 ELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRC 210
+L+ GVIF+ + EHPD+ K+Y TV+P GDN ++ALN+AV++ GSF+Y+P GV
Sbjct: 404 DLEAQGVIFLDTDTGLREHPDVFKQYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHV 463
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
+ L YFRIN + GQFERTLII E +YV+Y+EGCTAP + LH+AVVE++
Sbjct: 464 DIPLQAYFRINXENMGQFERTLIIVGENAYVTYVEGCTAPIYKSDXLHSAVVEIIVKPGG 523
Query: 271 EIKYSTVQNWY 281
+Y+T+QNW
Sbjct: 524 RCRYTTIQNWS 534
>gi|313888157|ref|ZP_07821831.1| SufB/sufD domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845847|gb|EFR33234.1| SufB/sufD domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 349
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
F ++++ + F+ I+A++ S + + T+ E V++++A +N+E++
Sbjct: 86 LFELDDEYSELFDLHHIVAEKDSKLKLVLDYTSCGSSEKFR-NTVIKVLARENSEVEVFV 144
Query: 277 VQNWYPGD-SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ G+Y +++S Q E GSA + C L GE S G
Sbjct: 145 IARDDDKSLVLESIGVYT---------EDHARVSVHQYELGSARLYTNYKCELIGEYSEG 195
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
SI + I+ M+H K T S I+ G G S+ ++ + GA +
Sbjct: 196 NVNSIYFDQKDEYINMNYDMIHRGKKTESDILVNGALKGRSSKNFKSNLQFIEGAKGAVG 255
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ S+L+ + + ++P + + H +++ K+ +FY + RGI E A AL
Sbjct: 256 SEEEYSILLDDTVHSISVPLMLAHEDDVVGNHASSSGKLDGNQIFYLMSRGISYEEAEAL 315
Query: 456 IVNGFVREVLQKLPME 471
IV + L E
Sbjct: 316 IVESKFSGAIDALEDE 331
>gi|291523629|emb|CBK81922.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Coprococcus catus GD/7]
Length = 355
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 101/252 (40%), Gaps = 12/252 (4%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I A+E + V+ +E T+ ++ ++ L A +L A N+ I+ + G
Sbjct: 107 IAAEENARVTVIEKFTSGKKAQSDL-AFRTKLYAGKNSTIRLIQINMLDEGQR------- 158
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ G +K+ Q+ G + L G QS I Q +D
Sbjct: 159 -LLNAVGSVCDETAKLDVLQMFVGRGDVYNGIQTELEGNQSELHTEIGYIGQKQQTLDMN 217
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H K T I G + +RG + RG++ S+ + LL+G++ T
Sbjct: 218 LVINHWGKKTNCDIQVDGTLKDAAKKVFRGSIDFKRGSSGSKGAETENVLLLGDDVENKT 277
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
IP I + H AT ++ +E LFY RGI +E A ++ + + Q + E
Sbjct: 278 IPLILCAEEDVDGSHGATIGELDEETLFYFAARGIDQETAEDIMTKAKLEVLYQHIQDE- 336
Query: 473 AVEAQKLIDISL 484
E ++++ L
Sbjct: 337 --ETERIVADQL 346
>gi|238019152|ref|ZP_04599578.1| hypothetical protein VEIDISOL_01015 [Veillonella dispar ATCC 17748]
gi|237863851|gb|EEP65141.1| hypothetical protein VEIDISOL_01015 [Veillonella dispar ATCC 17748]
Length = 348
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 91/262 (34%), Gaps = 9/262 (3%)
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
+ R I EG+ + T + + + E + ++
Sbjct: 87 EVVGIRIDANARVANRFQFIVGEGAELEVQFYVTGTGEALTNI-SYLNEYDVKEGGKVVV 145
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
V + R ++ + + +E G + L G++S
Sbjct: 146 KKVNLLPEHVQHIEH--------RYTKLEDKADVEYINIELGGSENILNYYHDLVGQESR 197
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ N Q+ D M H K + S I + G +G S ++RG + GA S
Sbjct: 198 MVHDIAYLGNEEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLHGATASE 257
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ LL+ + ++P + K + H A+ +I LFY + RG E A
Sbjct: 258 GAEEDTCLLLDPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFSEVEAKH 317
Query: 455 LIVNGFVREVLQKLPMEFAVEA 476
+IV +R ++ ++ E EA
Sbjct: 318 IIVESMIRPIIDRIGDETIEEA 339
>gi|289449923|ref|YP_003474708.1| SufB/sufD domain-containing protein [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184470|gb|ADC90895.1| SufB/sufD domain protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 384
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 105/369 (28%), Gaps = 23/369 (6%)
Query: 115 LGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVK 174
L P E V +V + + GV + + D
Sbjct: 2 LKFPCALSESDLAAMQGTVVDFTAAGQPAVPEQLADAGQMIGVALLKNHSLSAKAYDAFA 61
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
L + A P + +L ++ +
Sbjct: 62 DVLFQPESKRPQTLFLQDLARPQTSL---CPDWTQVKNDLLILRLPASNDESRYFSFNVP 118
Query: 235 ADEGSYVSYLEGCTAP--------------QRDENQLHAAVVELVALDNAEIKYSTVQNW 280
+ + +E + A +++ +AE+ V
Sbjct: 119 TNTKRQIVIVEADSCSPAAVATLSPDTRTAAAAATGKAATFIDISVERDAELNIVYVHAA 178
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ G + + +WT ++ ++ ++ L + +
Sbjct: 179 HTATPHTAG-----ICLYNARVATNAAFTWTAVDFTGSL-QEFGRTELAEPYAKANINAA 232
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A + TK++ +TT+ I ++G+ G + + +GA+ + +
Sbjct: 233 AFILSGHEQSYLTKIICARPHTTAHIFNRGVVEGKATGRMAAVCDIAKGASGTIARQENR 292
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
+ + A P + H AT ++ +E +Y RG+ AI L+ GF
Sbjct: 293 FITLSPEAKAFADPSLLIDEYDVAASHLATVGQLDEESTYYLCSRGLSRSQAIRLVTVGF 352
Query: 461 VREVLQKLP 469
+ VL +P
Sbjct: 353 LIPVLDLIP 361
>gi|296242279|ref|YP_003649766.1| SufBD protein [Thermosphaera aggregans DSM 11486]
gi|296094863|gb|ADG90814.1| SufBD protein [Thermosphaera aggregans DSM 11486]
Length = 360
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 72/358 (20%), Positives = 143/358 (39%), Gaps = 23/358 (6%)
Query: 127 GVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDN 186
G+ V + + ++ + L G++ + A + + +K ++ + G
Sbjct: 15 GLPFPGEVSSVVVNEKLFMKSYIKTLSGKGIVLEDVKTAF-NNKEYAEKIINILEKNGLK 73
Query: 187 FYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEG 246
+ G +V +P G+R L F + G Q +I ++ + V+ +G
Sbjct: 74 KDVFQQQGL--TGLYVKVPAGLRLETPLYYCFILESPGFYQKILNIIDIEDNAQVTLAKG 131
Query: 247 CTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRS 306
C A + +H+A+ + N+++ V NW G + G S
Sbjct: 132 CAAIVEEG--VHSALTLIDIGSNSDVTSIMVHNWRSKVKVGAKTSVSL--------GEGS 181
Query: 307 KISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRI 366
++ S + ++ E YS I + ++ T++ +++ +
Sbjct: 182 VFREYYVKLTPVDAITLTSEVNAYGKARVEIYSSTIGHRNSRVLHNTRVRLKGSGSSAIV 241
Query: 367 VSKGISAGFSNNTYRGKVSVHRGAA--HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
K ++ S K + A ++ +C LL+GN TIP ++S +
Sbjct: 242 NVKSVAHDQSFI----KHDITLEAWSGETKGHVECTGLLLGN-AVFETIPSLKSVSMDSE 296
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP---MEFAVEAQKL 479
L HEA+ KI + +FY + RG+ EE A LIV GF+ +V +KLP E+ + ++
Sbjct: 297 LTHEASLGKIKSDEVFYLMTRGLSEEEATRLIVVGFLSQVYEKLPKHLKEYLLSITRM 354
>gi|282850317|ref|ZP_06259696.1| SufB/sufD domain protein [Veillonella parvula ATCC 17745]
gi|294791961|ref|ZP_06757109.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 6_1_27]
gi|282579810|gb|EFB85214.1| SufB/sufD domain protein [Veillonella parvula ATCC 17745]
gi|294457191|gb|EFG25553.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 6_1_27]
Length = 348
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/312 (17%), Positives = 104/312 (33%), Gaps = 9/312 (2%)
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A+ + D++ + N+ A AV P +
Sbjct: 37 AVEANKDILSPLPVGTALLDGNYEGANKEAVHVLVEKAEGYAINVPPKAKEVVGIRIDAN 96
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
R I EG+ + T + + + E + ++ V
Sbjct: 97 ARVANRFQFIVGEGAELEVQFYVTGSGDALTNV-SYLNEYDVKEAGKVVVKKVNLLPEHV 155
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ R ++ + + +E G + L G++S + N
Sbjct: 156 QHIEH--------RYTKLEEKADVEYINIEIGGSENILNYYHDLVGQESRMVHDIAYLGN 207
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q+ D M H K + S I + G +G S ++RG + GA S + LL+
Sbjct: 208 KEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLNGATASEGAEEDTCLLL 267
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ ++P + K + H A+ +I LFY + RG E A +IV +R +
Sbjct: 268 DPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFSEVEAKHIIVESMIRPI 327
Query: 465 LQKLPMEFAVEA 476
+ ++ E EA
Sbjct: 328 IDRIGDETIEEA 339
>gi|292671039|ref|ZP_06604465.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Selenomonas noxia ATCC 43541]
gi|292647356|gb|EFF65328.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Selenomonas noxia ATCC 43541]
Length = 281
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 1/193 (0%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
++ G + S T E G+A T L G+++ + + + + ++ID
Sbjct: 84 ASRIKAEVGKQGLFSCTIAEIGAAHTASELHVTLAGDEARADVWGLYFGDAERKIDLNYI 143
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ + T + + +G S T+RG + +GA S + ++ + ++P
Sbjct: 144 IRQEGQRTDANMQVRGALLNRSVKTFRGTLDFVQGARGSTGKEDEEVTILSPHVRNRSVP 203
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP-MEFA 473
+ S + H + K+ +E LFY + RG+ + AA LIV VL ++ E
Sbjct: 204 LMLSHEGDVDGHHAVSIGKMDEEKLFYLMSRGLDDRAAQQLIVEASFEPVLARIENDELR 263
Query: 474 VEAQKLIDISLEG 486
E ++ L G
Sbjct: 264 AEIAHYLERRLLG 276
>gi|225408018|ref|ZP_03761207.1| hypothetical protein CLOSTASPAR_05239 [Clostridium asparagiforme
DSM 15981]
gi|225042451|gb|EEG52697.1| hypothetical protein CLOSTASPAR_05239 [Clostridium asparagiforme
DSM 15981]
Length = 380
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 8/215 (3%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
A NA ++ +Q G Y + G G + + QL G A T+
Sbjct: 161 TRFKARKNARVRLIQLQLLGSG--------YRMLNDIGGSCGDGASVEIVQLFLGGAETY 212
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L G +S + Q+ D H + + SRI++ G+ + +R
Sbjct: 213 AGCLAELDGTESALSVDVGYLGIEGQRFDMNYVANHRGRRSKSRIMAGGVLRDQAFKLFR 272
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + GAA + Q D L++G++ TIP I H AT ++ DE LFY
Sbjct: 273 GTIDFKAGAAGAEGEEQEDVLILGDDAVNQTIPLILCAEEDVQGSHGATIGRLDDELLFY 332
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
RG+ E A ++ + +V +++ E A
Sbjct: 333 LCSRGMSREKAAQVMTRAKLDKVCRRIGDEAARRL 367
>gi|14915777|gb|AAK73803.1| ORF470 [Eimeria papillata]
Length = 235
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 105/230 (45%), Positives = 146/230 (63%), Gaps = 6/230 (2%)
Query: 103 DVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPI 162
+ L+ EK+G+ I+E ++ ++VD V DS+S+V T L K+G+IF+P
Sbjct: 1 QLQLHLIHILEKIGLNIQESHTIS-----TLSVDVVLDSISIVDTITNFLLKTGIIFIPF 55
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
+ I P L+ Y+ T+V + DNF+A LNS +F+ GSF +I K ++C + LSTYFR
Sbjct: 56 FDGINYFPYLIFSYVGTIVSLEDNFFATLNSTIFSGGSFCFIAKNIKCNINLSTYFRTQS 115
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
+ QFERTL+I + V Y EGC+AP E+QLH A+VE++ D + YSTVQNWY
Sbjct: 116 EDFAQFERTLLIVSSSASVIYTEGCSAPIFLESQLHVALVEILVKDKGTLNYSTVQNWYR 175
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
GD G+GG+YNF TKRG C + ++W Q+E GSAITWKYPS L GE
Sbjct: 176 GDQSGEGGLYNFTTKRGWCL-KNACLNWIQIEIGSAITWKYPSTYLIGEN 224
>gi|294793825|ref|ZP_06758962.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 3_1_44]
gi|294455395|gb|EFG23767.1| iron-regulated ABC-type transporter membrane component [Veillonella
sp. 3_1_44]
Length = 348
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 92/266 (34%), Gaps = 9/266 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNA 270
P + R I EG+ + T + + + E +
Sbjct: 83 PKAKEVVGIRIDANARVANRFQFIVGEGAELEVQFYVTGSGDALTNV-SYLNEYDVKEAG 141
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++ V + R ++ + + +E G + L G
Sbjct: 142 KVVVKKVNLLPEHVQHIEH--------RYTKLEEKADVEYINIEIGGSENILNYYHDLVG 193
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
++S + N Q+ D M H K + S I + G +G S ++RG + GA
Sbjct: 194 QESRMVHDIAYLGNKEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLNGA 253
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
S + LL+ + ++P + K + H A+ +I LFY + RG E
Sbjct: 254 TASEGAEEDTCLLLDPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFSEV 313
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEA 476
A +IV +R ++ ++ E EA
Sbjct: 314 EAKHIIVESMIRPIIDRIGDETIEEA 339
>gi|290969104|ref|ZP_06560634.1| SufB/sufD domain protein [Megasphaera genomosp. type_1 str. 28L]
gi|290780864|gb|EFD93462.1| SufB/sufD domain protein [Megasphaera genomosp. type_1 str. 28L]
Length = 365
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 85/265 (32%), Gaps = 8/265 (3%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ + S + + G++ T E+
Sbjct: 81 CQVTIGAQKKGSVWLHYTVDDKSPQIHGQLYVKAGAHSELNVFITFDGDAEDGEVNLFQY 140
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ A A++K S +Q R ++ + + ++ G Y
Sbjct: 141 IEAAVGAKVKVSKLQLHGDRVRHIDH--------RLAKPEQQAYVEFDSVDLGGKEVLVY 192
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
L ++ YS I G Q D + T + I++ G + +RG
Sbjct: 193 YKGDLAKDEGECNIYSTYIGAGKQLFDFSYVVPTAGVKTKTDILNTGALMETAKKYFRGT 252
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ RG + LL+ + +IP + K H ++ +I + LFY +
Sbjct: 253 IDFLRGGKKAFGSESDVCLLLSPTVHSISIPLLLCKEDDVVGNHASSAGQIDKDMLFYLM 312
Query: 444 QRGIPEEAAIALIVNGFVREVLQKL 468
RG E A ++V VR ++ KL
Sbjct: 313 SRGFDEAGAQLILVESNVRPIIDKL 337
>gi|269798090|ref|YP_003311990.1| SufBD protein [Veillonella parvula DSM 2008]
gi|269094719|gb|ACZ24710.1| SufBD protein [Veillonella parvula DSM 2008]
Length = 348
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 56/312 (17%), Positives = 103/312 (33%), Gaps = 9/312 (2%)
Query: 165 AICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG 224
A+ + D++ + N+ A AV P +
Sbjct: 37 AVEANKDILSPLPVGTALLDGNYEGANKEAVQVLVEKAEGYAINVPPKAKEVVGIRIDAN 96
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
R I EG+ + T + + E + ++ V
Sbjct: 97 ARVANRFQFIVGEGAELEVQFYVTGSGDAL-INVSYLNEYDVKEAGKVVVKKVNLLPEHV 155
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ R ++ + + +E G + L G++S + N
Sbjct: 156 QHIEH--------RYTKLEEKADVEYINIEIGGSENILNYYHDLVGQESRMVHDIAYLGN 207
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
Q+ D M H K + S I + G +G S ++RG + GA S + LL+
Sbjct: 208 KEQKFDISMVMSHGGKKSFSDIHTLGALSGNSKKSFRGTLDFLNGATASEGAEEDTCLLL 267
Query: 405 GNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ ++P + K + H A+ +I LFY + RG E A +IV +R +
Sbjct: 268 DPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHNKLFYIMSRGFSEVEAKHIIVESMIRPI 327
Query: 465 LQKLPMEFAVEA 476
+ ++ E EA
Sbjct: 328 IDRIGDETIEEA 339
>gi|237734446|ref|ZP_04564927.1| predicted protein [Mollicutes bacterium D7]
gi|229382266|gb|EEO32357.1| predicted protein [Coprobacillus sp. D7]
Length = 297
Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 105/283 (37%), Gaps = 21/283 (7%)
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
V+ L + I+++G F+ + + +E D + V +
Sbjct: 35 DVKDAASLQIIYLIDQEGKYCFDLKI-----KGQLELIE-----TYDFKVPASLVKNIEV 84
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
L N+ I D+Q VT S + +E + +
Sbjct: 85 LQNSNI-------LRYNDNQSSVNGTVEVT-ENVSVERDSNVRCAYVELSDSSIEMNVNH 136
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L G + +++ G ++ + H A +TT + + G+ SN G ++
Sbjct: 137 ALNGSNANSTVRLASLAKGQEKKHMTFSLTHFAPHTTGIMDNYGVVKDASNLVIDGIGTI 196
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+G S + ++ C A PY+ H A+ KI ++HL+Y RG
Sbjct: 197 KQGNHQSSSHQTNKIIVFDEKCNAKANPYLYIDEYDVKASHGASVGKIDEDHLYYLQSRG 256
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ ++ A+ L+ G+ V++ + + +++ + +L+ VG
Sbjct: 257 LSKKDAMHLVTYGYFIPVMEFID---NADLREMFNETLKEKVG 296
>gi|269986286|gb|EEZ92594.1| SufBD protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 377
Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats.
Identities = 75/436 (17%), Positives = 153/436 (35%), Gaps = 70/436 (16%)
Query: 50 EPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELL 109
EP+W+L++R + +K I I+ ++ +Y++ K
Sbjct: 6 EPNWLLKYREEEEKAANELKLED-RNIFLKYIEKENEFYFSDLKEKNE------------ 52
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
E L G ++ V EEL K
Sbjct: 53 -----------EINELFGYDEETFKDKFNIKNIKEVEEKPEELDKF-------------- 87
Query: 170 PDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
+ AL ++ F G+ + + + K +
Sbjct: 88 -------------KDKDRIEALINSHFNAGAIITFKDNINLSEPFKI--KQFAKSGREIT 132
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
+ ++I S + + + + + + + LV +++E+ + +
Sbjct: 133 KIILIVGRNSKLYIQDEIDSDKDAYSGQN---IYLVIGEDSEVNFMLL----DKSKGRSV 185
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
N +TK KI++ L T + I + E S I NG
Sbjct: 186 TNVNLLTK--------GKINFVSLFTNNQINRNRLWIKML-EHSEVNIQQGIIGNGQSYF 236
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D ++++H KNT+S + K + + Y+G + + A +S + SL++ +
Sbjct: 237 DIESEIIHFEKNTSSNLSYKALLDNSAKAVYKGVIRQEKRAVNSYAYLSEHSLILNKDAK 296
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ ++P +E + + H A++ + E LFY + RG+ +E A+ +I +GF+ V +K
Sbjct: 297 SISVPSLEIETNELKAYHSASSQPLDKEMLFYAMSRGLDKELAVKMIASGFIESVFKKTE 356
Query: 470 -MEFAVEAQKLIDISL 484
EF LI+ +
Sbjct: 357 KKEFIDSLNNLIENKM 372
>gi|152990763|ref|YP_001356485.1| Fe-S cluster assembly protein SufD [Nitratiruptor sp. SB155-2]
gi|151422624|dbj|BAF70128.1| Fe-S cluster assembly protein SufD [Nitratiruptor sp. SB155-2]
Length = 379
Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 95/270 (35%), Gaps = 11/270 (4%)
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
+ E + + T R I G E + L+ ++
Sbjct: 110 DIEEDCEFKIVHKFTKSNTFVPYRIKITVHPGINAKIREDYLVLSDESLYLYGF--DIHL 167
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
N+ ++ VQN + + M S+ + G+A T
Sbjct: 168 GKNSVLQL--VQNRTTNFANFAQ-----IAPHSVRCDMSSEFRLFTFDFGNAKTLHNYHI 220
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L E + + + +I + + + K++ + +++ I + + G + V
Sbjct: 221 TL-EENAAANANHVLFAKEKARIGNTFHIENRGKDSRTVQMARNILKDEARGIFDGLLIV 279
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQR 445
A +S + ++L+ + + P +E H +TT + +E LFY QR
Sbjct: 280 KNPAKYSSIYQDSKTILLNDGAYMVSKPQMEIYTEYILEATHGSTTGHLDEEALFYLRQR 339
Query: 446 GIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
GI E A ++V F+ E+ +KL E E
Sbjct: 340 GIAEADAKEMLVLSFLNEIFEKLNDEEIKE 369
>gi|320528858|ref|ZP_08029950.1| SufB/sufD domain protein [Selenomonas artemidis F0399]
gi|320138488|gb|EFW30378.1| SufB/sufD domain protein [Selenomonas artemidis F0399]
Length = 265
Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 11/227 (4%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+ D AE+ + +Q + + G S T +E G+A T
Sbjct: 48 IHAEVADGAEMHLTFIQVVPTDAAAAS--------RIEAEVGKNGLFSCTLVEAGAAHTA 99
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L G+++ + + + + ++ID + + T + + +G G+S T+R
Sbjct: 100 SELRVNLAGDEARADVWGLYFGDAERKIDLNYIIRQAGRLTDANLQVRGALLGYSKKTFR 159
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + G+ S + ++ N ++P + S + H + +I + LFY
Sbjct: 160 GTLDFVAGSRGSAGNEDEEVTILSPNARNRSVPLMLSHEGDVDGHHAVSIGRIDPDKLFY 219
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ RG+ E AA L+V VL ++ E E + I +EG +
Sbjct: 220 LMSRGLDEYAAQQLVVEASFAPVLARIESE---ELRTEITDYIEGRL 263
>gi|295094613|emb|CBK83704.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Coprococcus sp. ART55/1]
Length = 355
Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 13/270 (4%)
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
G + AD GS ++ +E + A +A I+
Sbjct: 88 VHVLINGTGANGSSGYAYVQADAGSDMTVIETFGENAEGGSL--AFRTRFNIEKDAHIRL 145
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + G ++ Q+ G + L G+++
Sbjct: 146 VQIFMQDEN--------TTILNDVGSECAENGQLDVLQIFIGKGNLYNGVRTELIGKRAS 197
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ Q ID + H+ K T I G + +RG + G++ S+
Sbjct: 198 TNMDIGYLGQKKQVIDINLVVNHIGKKTNCNIQVDGTLKDAAEKIFRGSIDFKTGSSDSK 257
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ LL+G++ TIP I + H AT ++ ++ LFY RGI E A
Sbjct: 258 GAETENVLLLGDDVVNKTIPLILCAEENVEGSHGATIGELDEDTLFYFASRGIDMETAED 317
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
++ G + + +K+ E + +KL++ L
Sbjct: 318 MMTKGKMEVLYRKIQDE---DTEKLVEKQL 344
>gi|302669427|ref|YP_003829387.1| FeS assembly protein SufD [Butyrivibrio proteoclasticus B316]
gi|302393900|gb|ADL32805.1| FeS assembly protein SufD [Butyrivibrio proteoclasticus B316]
Length = 389
Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats.
Identities = 59/297 (19%), Positives = 103/297 (34%), Gaps = 17/297 (5%)
Query: 163 SEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
+ + +++ + V SA T + + +G + F +
Sbjct: 84 DTSARDSEQVIRTGMGVDVDK------LFISAGATCDVYT-VDEGAIVEQPVVIRF-DMK 135
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV-VELVALDNAEIKYSTVQNWY 281
G G +I A + S V+ + + + E V ++ + A + Q
Sbjct: 136 DGQGCLASNVIHARKNSEVTVIMDYASGEDKEASGFLGVSTRVLVEEGARVNLVKTQML- 194
Query: 282 PGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIA 341
G Y G + I LE G+ W L ++S
Sbjct: 195 -------GNGYLHFDDLGGVCFEKGAIRLVGLELGAKKVWNGSYINLATKESDFTSDIGF 247
Query: 342 ISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
+ QID H K T + + KG+ + T R + G+A S Q D
Sbjct: 248 LGRDDHQIDINYVADHRGKKTNALMQFKGVLMDEAQKTLRFTIDFKNGSAGSVGDEQEDV 307
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
LL+G + T+P I + + H AT ++ ++ LFY RGI EE A +++
Sbjct: 308 LLLGEDVINRTMPIILCQEEDVDGRHGATIGQLGEDLLFYMQSRGIDEEEAKRIMIR 364
>gi|68074025|ref|XP_678927.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499545|emb|CAH96193.1| conserved hypothetical protein [Plasmodium berghei]
Length = 1110
Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats.
Identities = 46/245 (18%), Positives = 95/245 (38%), Gaps = 10/245 (4%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
R ++ E S ++ E + + + A+ + N+++ + Q
Sbjct: 845 NPRLVLYIKENSKINIHESHISLNNNNGGMVNALSRIYLEQNSKVNHILSQELGKSAW-- 902
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ G+ S + + GS + + S + Y +++ G Q
Sbjct: 903 ------YFHNVSVQNGINSNYKFVDILLGSLSSRVNLQIE-GSQGSKQQSYGLSLLEGKQ 955
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
I H + + + K + + +++ +R + + R A ++ T C S+L+
Sbjct: 956 NISQYEMFHHEHSSMQTDQLFKSLVSDTAHSVWRSRGRIERNAIKAKLNTLCRSVLLNLG 1015
Query: 408 CGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQ 466
A IP +E S H AT S + +E +F + RGI A +++ FV E+L+
Sbjct: 1016 ASAVAIPTLEIIPSDIEEANHGATISDLEEEPIFSLMSRGIDTNIARRIMMKAFVNEILE 1075
Query: 467 KLPME 471
+P E
Sbjct: 1076 HVPDE 1080
>gi|167756727|ref|ZP_02428854.1| hypothetical protein CLORAM_02268 [Clostridium ramosum DSM 1402]
gi|167702902|gb|EDS17481.1| hypothetical protein CLORAM_02268 [Clostridium ramosum DSM 1402]
Length = 297
Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 105/283 (37%), Gaps = 21/283 (7%)
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
V+ L + I+++G F+ + + +E D + V +
Sbjct: 35 DVKDAASLQIIYLIDQEGKYCFDLKI-----KGQLELIE-----TYDFKVPASLVKNIEV 84
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
L N+ I D+Q VT S + +E + +
Sbjct: 85 LQNSNI-------LRYNDNQSSVNGTVEVT-ENVSVERDSNVRCAYVELSDSSIEMNVNH 136
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L G + +++ G ++ + H A +TT + + G+ SN G ++
Sbjct: 137 ALNGFNANSTVRLASLAKGQEKKHMTFSLTHFAPHTTGIMDNYGVVKDASNLVIDGIGTI 196
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+G S + ++ C A PY+ H A+ KI ++HL+Y RG
Sbjct: 197 KQGNHQSSSHQTNKIIVFDEKCNAKANPYLYIDEYDVKASHGASVGKIDEDHLYYLQSRG 256
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ ++ A+ L+ G+ V++ + + +++ + +L+ VG
Sbjct: 257 LSKKDAMHLVTYGYFIPVMEFID---NADLREMFNETLKEKVG 296
>gi|116492288|ref|YP_804023.1| Fe-S cluster assembly ABC-type transport system, permease component
[Pediococcus pentosaceus ATCC 25745]
gi|116102438|gb|ABJ67581.1| Fe-S cluster assembly ABC-type transport system, permease component
[Pediococcus pentosaceus ATCC 25745]
Length = 342
Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 89/288 (30%), Gaps = 12/288 (4%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYL 244
DN + ++ G + +P V +L F L+ GS +
Sbjct: 65 DNQFMLEHAQQSWQGLELILPARVTLKNKLHLEITFEAAQPSAFT-MLLNVGAGSQMQLE 123
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYS-TVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
P + + ++ + +Q +
Sbjct: 124 REIHYP--PVSTRLNLLTCGKVEADSRLNLVDRLQGGQSPQQSLWMANLH--------CQ 173
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+++ W+ +L + S F I + H A T
Sbjct: 174 KDAQLDWSFYPEVKGKVLGKCITVLEEQGSSAVFKVGQFGRRDDWIGIQGLIDHRAPKTF 233
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
SRI +G+ + + +++GA + + + I + P + +
Sbjct: 234 SRIKMRGVLYEKAQVYFTSIGKINKGAHGANAAQESRLMTIEPHAKGSVNPLLIIDENDV 293
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H A+ + +E L+Y L RG+ E A +++N F+ VL K +E
Sbjct: 294 QAGHAASVGQYDEEALYYLLSRGLVEADAKQILINNFMEPVLPKETVE 341
>gi|313893252|ref|ZP_07826827.1| SufB/sufD domain protein [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442148|gb|EFR60565.1| SufB/sufD domain protein [Veillonella sp. oral taxon 158 str.
F0412]
Length = 348
Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 74/183 (40%)
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ R + + + +E G + L G++S + N Q+ D
Sbjct: 157 HIEHRYTKLEDNADVEYINIEIGGSENILNYYHDLVGKKSRIIHDIAYLGNKEQKFDISM 216
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
M H K + S I + G +G + ++RG + GA S + LL+ + ++
Sbjct: 217 IMSHGGKKSVSDIHNLGALSGNAKKSFRGTLDFLHGATASEGAEEDTCLLLDPTVKSISL 276
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + K + H A+ +I LFY + RG E A +IV +R ++ ++ E
Sbjct: 277 PLLLCKEDNVVGNHAASAGQIDHNKLFYLMSRGFSEVEAKHIIVESMIRPIIDRIGDETI 336
Query: 474 VEA 476
EA
Sbjct: 337 EEA 339
>gi|160894915|ref|ZP_02075689.1| hypothetical protein CLOL250_02465 [Clostridium sp. L2-50]
gi|156863346|gb|EDO56777.1| hypothetical protein CLOL250_02465 [Clostridium sp. L2-50]
Length = 363
Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 11/223 (4%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+ A ++ ++ V + G +K Q+ G +
Sbjct: 141 TMIQAKKDSRVRLVQVFMQDEEQ--------TLLNDIGCVCDENAKFDILQIFIGKGDLY 192
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L+G + + + Q+ID + H K T I G + +R
Sbjct: 193 NGIRTDLKGTGADTQVEIGYLGQKTQKIDVNLIINHFGKKTNCEIQVDGTLKDAAEKVFR 252
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + GA+ S + LL+G++ TIP I H AT ++ +E LFY
Sbjct: 253 GTIDFKNGASESTGAETENVLLLGDDVINKTIPIILCAEEDVEGSHGATIGELDEETLFY 312
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
RGI +EAA ++ +G + + + E + QKL++ L
Sbjct: 313 FESRGIDKEAAEDIMTHGKFEMLYRHIGDE---QTQKLVEAQL 352
>gi|163814489|ref|ZP_02205878.1| hypothetical protein COPEUT_00640 [Coprococcus eutactus ATCC 27759]
gi|158450124|gb|EDP27119.1| hypothetical protein COPEUT_00640 [Coprococcus eutactus ATCC 27759]
Length = 355
Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 13/270 (4%)
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
G + AD GS ++ +E + A +A I+
Sbjct: 88 VHVLINGTGANGSSGYAYVQADAGSDMTVIETFGENAEGGSL--AFRTRFNIEKDAHIRL 145
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+ + G ++ Q+ G + L G+++
Sbjct: 146 VQIFMQDEN--------TTILNDVGSECAENGQLDVLQIFIGKGNLYNGVRTELIGKRAS 197
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
+ Q ID + H+ K T I G + +RG + G++ S+
Sbjct: 198 TNMDIGYLGQKKQVIDINLVVNHIGKKTNCSIQVDGTLKDAAEKIFRGSIDFKTGSSDSK 257
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ LL+G++ TIP I + H AT ++ ++ LFY RGI E A
Sbjct: 258 GAETENVLLLGDDVVNKTIPLILCAEENVEGSHGATIGELDEDTLFYFASRGIDMETAED 317
Query: 455 LIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
++ G + + +K+ E + +KL++ L
Sbjct: 318 MMTKGKMEVLYRKIQDE---DTEKLVEKQL 344
>gi|256371364|ref|YP_003109188.1| SufBD protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256007948|gb|ACU53515.1| SufBD protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 393
Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 80/197 (40%), Gaps = 5/197 (2%)
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A+ ++++++ G + G G T+ G + + ++ L
Sbjct: 183 ADGVHASLRHLSMGGA-GSIGFLQLRTR----LGADADLVVAEVAAQGGYHRTRSDVHLT 237
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
GE++ S ++ + + T ++H A T S ++ KG G + Y G +++
Sbjct: 238 GERARVRIRSAFVAGSGEVEEFRTFVVHAAPRTASDLLYKGALTGSGTSVYSGLITIEPA 297
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
S F +LL+ A ++P ++ + S H +T + E +F +GI
Sbjct: 298 GHGSDAFQTNRNLLLSPEARAESVPNLDIQVSDVRCSHASTVGPLEAELVFALEAKGIDP 357
Query: 450 EAAIALIVNGFVREVLQ 466
+ A ++ +GF ++
Sbjct: 358 DRAQRILADGFFADIAD 374
>gi|315925583|ref|ZP_07921793.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621124|gb|EFV01095.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
Length = 352
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 11/226 (4%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
++ ++A ++ + + ++N V R D G + + T+
Sbjct: 135 TKIQIGEDARLRLVQIHR-----AGEHIRVFNDVGARCDAGGR---LEVIHIMMNGGPTY 186
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L GE S + + +D HL KNT S I + G+ + +R
Sbjct: 187 AGCRADLAGEGSSLKADIGYLVENQGLLDMNYVANHLGKNTDSEINASGVLRDTAEKLFR 246
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + RG S + + LL+ + TIP I H AT ++ DE LFY
Sbjct: 247 GTIDFKRGCGGSVGNEKENVLLMDDAVVNKTIPLILCAEEDVEGNHGATIGRLDDELLFY 306
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
RG+ + ++ + V + +P EA L+ +LEGS
Sbjct: 307 LESRGMNQADIYEMMAQSRIAAVCRLIPDAVTREA--LLK-TLEGS 349
>gi|315304563|ref|ZP_07874814.1| FeS assembly protein SufB [Listeria ivanovii FSL F6-596]
gi|313627071|gb|EFR95953.1| FeS assembly protein SufB [Listeria ivanovii FSL F6-596]
Length = 79
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
TIPY E NS+ +LEHEA SK+S+E LFY + RG+ EE A +IV GF+ ++LPM
Sbjct: 1 DTIPYNEILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPM 60
Query: 471 EFAVEAQKLIDISLEGSVG 489
E+AVE +LI +EGS+G
Sbjct: 61 EYAVEMNRLIKFEMEGSIG 79
>gi|313895519|ref|ZP_07829075.1| SufB/sufD domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975645|gb|EFR41104.1| SufB/sufD domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 257
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 11/227 (4%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+ D AE+ + +Q + + G + S T +E G+A T
Sbjct: 40 IHAEVADGAEMHLTFIQVVPIDAAAAS--------RIEAEVGKKGLFSCTLVEAGAAHTA 91
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L G+++ + + + + ++ID + + T + + +G G S T+R
Sbjct: 92 AELRVNLAGDEARADVWGLYFGDAERKIDLNYIIRQAGRLTDANLQVRGALLGHSKKTFR 151
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + G+ S + ++ N ++P + S + H + +I + LFY
Sbjct: 152 GTLDFVAGSRGSAGKEDEEVTILSPNARNRSVPLMLSHEGDVDGHHAVSIGRIDADKLFY 211
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ RG+ E AA L+V VL ++ E E + I +EG +
Sbjct: 212 LMSRGLDEYAAQQLVVEASFAPVLARIESE---ELRTEITDYIEGRL 255
>gi|306820863|ref|ZP_07454485.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551105|gb|EFM39074.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 344
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ N + + I A+E + S++ + + ++ + + A +N+ +
Sbjct: 82 IRYEFNSQNNVLLDDIKIQANENTRSSFIIDYKNLENVKTFRNSFL-YVYAKENSVVDIF 140
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ + G + +++++ ++ G L G ++
Sbjct: 141 LISRQDYLAKTWQS--------VGIIQEKNAEVNFYVVDMGIGEKILSHHSYLNGAKAKL 192
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
++ + D + + T + I GI S +R + +GA S
Sbjct: 193 NIEGSYFTDKEENFDVLYNVDIFGQLTKTDITVNGIQKDDSKKVFRAVLDFKKGAKASEG 252
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
L+ + ++P I + H A+ ++ ++ +FY + RG E A +L
Sbjct: 253 SQTEYVTLLDKTVRSKSLPIILCSEENITGNHAASAGQLDEDMVFYIMSRGFSREEAKSL 312
Query: 456 IVNGFVREVLQKLPMEFAV-EAQKLIDISL 484
IV + V+ K+P E E + + + +
Sbjct: 313 IVKARLIPVIDKIPDEKIKQELLEELKMKM 342
>gi|291534068|emb|CBL07181.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Megamonas hypermegale ART12/1]
Length = 364
Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats.
Identities = 58/413 (14%), Positives = 129/413 (31%), Gaps = 73/413 (17%)
Query: 62 YRRWLTMKDPSWARIRYPA--IDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPI 119
+ ++ P+W ++ I +D++ L + P+++ + E + +
Sbjct: 7 FEHANSLPMPTWRWLKLNDTTISYDNI------------DKLTPLKPQIINSTENIFLAS 54
Query: 120 REQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLST 179
++ A + + D+ V
Sbjct: 55 QKDIAFANFPHITTGIGSDADNFVVNN--------------------------------- 81
Query: 180 VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
++ ++ I L + + I A E S
Sbjct: 82 ----------------ASNKNYFTIKANTITQKPL-IFIYDLTDNLDLIDDNYIYAQENS 124
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ + +P HA+ ++ A NA++K +Q G
Sbjct: 125 QATIIIVYNSP-YHNQGFHASSTKIFAEKNAQVKIIQLQTLGKDYFNFDD--------IG 175
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
++IS Q+ G+ + + L + +F + ++ Q +D + L
Sbjct: 176 TLAQENARISIQQIALGANKNYLGANIDLLQNNAQLDFQTDYLTAKNQMLDMNYIVNILG 235
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ T + + + GI + T+R + +G S + LL+ + +IP I
Sbjct: 236 QKTKTNLTTNGILMHNAQKTHRATLDFKQGCKGSIGTEAENVLLLDEDIHNKSIPLILCG 295
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
H A+ ++ E LFY RG+ E + ++ ++ + LP E
Sbjct: 296 EDDIEGNHSASIGEMDKEQLFYLQTRGLNERQIRQMQIDSKLQLITTNLPEEL 348
>gi|225022669|ref|ZP_03711861.1| hypothetical protein CORMATOL_02714 [Corynebacterium matruchotii
ATCC 33806]
gi|224944577|gb|EEG25786.1| hypothetical protein CORMATOL_02714 [Corynebacterium matruchotii
ATCC 33806]
Length = 377
Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/346 (15%), Positives = 127/346 (36%), Gaps = 21/346 (6%)
Query: 141 SVSVVTTFKEELKKSG-VIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD- 198
S+ + F G VI +++A+ +P V+ + ++ ++ L A +
Sbjct: 38 SILIDHHFGTLTSTDGDVIVTTLADALVRYP-WVQALVFDLITPEEDEV--LRRAFESQR 94
Query: 199 ---GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN 255
G+F ++ + ++ + + QF + + + + V ++ G +
Sbjct: 95 EPLGTFTWVKDNAHVELPSQSFTIMTKPQERQFVHDITVIGKNATVDFVSGAAVAPELTH 154
Query: 256 QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET 315
H +V E A ++ V W + R ++++ +
Sbjct: 155 ATHVSVSETYIGAGATVRSIDVDRWGA-------NMTVHSYDRTKI-DENARVTSVSVAV 206
Query: 316 GS-AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
+ + + + + G ++ D + + V++ +S G
Sbjct: 207 SGLKQSVNNSHTEVAAGAAITDHTILFAPTGTRR-DMTNTVSLTGPGAQAEQVARMVSDG 265
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ ++ A R F +CD L++ + +IP +++K + L HEA+ I
Sbjct: 266 GVIVN---RSTLEAAVAEVRGFLECDGLMLQDTGQIESIPALDAKVARAQLSHEASVGMI 322
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
D+ + Y + G+ E+ A LIV GF+ Q++P L+
Sbjct: 323 DDDKMDYLMATGLDEDRARDLIVQGFLNLDDQQVPASVRATVDNLV 368
>gi|160937112|ref|ZP_02084475.1| hypothetical protein CLOBOL_02002 [Clostridium bolteae ATCC
BAA-613]
gi|158440013|gb|EDP17761.1| hypothetical protein CLOBOL_02002 [Clostridium bolteae ATCC
BAA-613]
Length = 313
Score = 134 bits (336), Expect = 5e-29, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 97/253 (38%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDN 269
+ ++ G + E S V + GC D++ H + N
Sbjct: 69 NESVHIPVVVSASGLKEMVYNDFFIGEDSDVVIVAGCGIHNCGDQDSEHDGIHRFFVGKN 128
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++KY V+ Y I N T S + ++ + +C
Sbjct: 129 AKVKY--VEKHYGEGDGNGKRILNPGT--EVYMEENSYMEMEMVQIEGVDSTNRTNCAEL 184
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ +++G Q +S + +++++ +VS+ ++ S T+ +
Sbjct: 185 AAGAKLIVRERLLTHGSQNAESTYIVNLNGEDSSADVVSRSVAKDTSKQTFN--SKIVGN 242
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A T+CD++++ + IP + + N L HEA KI+ E + + G+ E
Sbjct: 243 A-KCSGHTECDAIIMDD-AKIFAIPGLIANNIDAALIHEAAIGKIAGEQIVKLMTLGLTE 300
Query: 450 EAAIALIVNGFVR 462
E A A IVNGF++
Sbjct: 301 EEAEAQIVNGFLK 313
>gi|14915773|gb|AAK73801.1| ORF470 [Eimeria nieschulzi]
Length = 234
Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 143/221 (64%), Gaps = 6/221 (2%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
EK+G+ I+E ++ ++VD V DS+S+V T L K+G+IF+P + I P
Sbjct: 9 LEKIGLNIQESNTIS-----TLSVDVVLDSISIVDTITNFLLKTGIIFIPFFDGINYFPY 63
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L+ Y+ T+V + DNF+A LNS +F+ GSF +I K ++C + LSTYFR + QFERT
Sbjct: 64 LIFLYVGTIVSLEDNFFATLNSIIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFERT 123
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + V Y EGC+AP E+QLH A+VE++ + + YSTVQNWY GD G+GG+
Sbjct: 124 LLIVSSSASVIYTEGCSAPIFLESQLHVALVEILVKNKGTLNYSTVQNWYRGDQSGEGGL 183
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
YNF TKRG C + ++W Q+E GSAITWKYPS + GE
Sbjct: 184 YNFTTKRGWCL-KNAVLNWIQIEIGSAITWKYPSTYIIGEN 223
>gi|227902812|ref|ZP_04020617.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
4796]
gi|227869475|gb|EEJ76896.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
4796]
Length = 86
Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ + + TIP +NS+ +EHEAT SKIS+E L+Y RGIPE A +I+ GFV
Sbjct: 1 MDDMSSSDTIPTNSIENSNVAMEHEATVSKISEEELYYLQSRGIPERKATEMIIMGFVEP 60
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
++LPME+AVE +LI +EG++G
Sbjct: 61 FTKQLPMEYAVELNRLISFQMEGAIG 86
>gi|293401920|ref|ZP_06646060.1| ABC transporter [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304578|gb|EFE45827.1| ABC transporter [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 315
Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 103/275 (37%), Gaps = 9/275 (3%)
Query: 189 AALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCT 248
+A I L + + G E + V + GC
Sbjct: 49 HVRINAKLDKPGIDIIVDANTVGESLHIPVILTDSGIKDVVYNDFYIGENADVEIIAGCG 108
Query: 249 APQRDENQ-LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSK 307
+ H + NA+++Y V+ Y + G I N VT G ++
Sbjct: 109 IHNDGCDTSQHDGIHTFHIAKNAKVRY--VEKHYGEGNGSGGRILNPVTIIHMEDGAYAQ 166
Query: 308 ISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
+ +Q++ G T + L G + +++G Q S + +++ +IV
Sbjct: 167 MDMSQIK-GVDSTMRKTEANL-GPHAKLVINEKLMTHGKQTAHSDVTVNLNGEDSVVQIV 224
Query: 368 SKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEH 427
S+ + S + + G SR QCDS+++ ++ +IP I + + + H
Sbjct: 225 SRSVGKDDSIQVFH---PIAIGNNKSRAHIQCDSIIM-DHAKISSIPEIAANHVDAEIVH 280
Query: 428 EATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
EA KI+ + L G+ E A +IV+GF++
Sbjct: 281 EAAIGKINSDQLVKLQTFGLSVEEAEKVIVDGFLK 315
>gi|330839781|ref|YP_004414361.1| SufBD protein [Selenomonas sputigena ATCC 35185]
gi|329747545|gb|AEC00902.1| SufBD protein [Selenomonas sputigena ATCC 35185]
Length = 278
Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 11/230 (4%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
A +E + VQ G+ N S+T +E G+
Sbjct: 56 HAEIEAHVEAGGTLSLVKVQLVPEGE--------NHADDVKVRVEEGGAFSYTIIEIGAN 107
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
S L G+ + + + ++ ++ D + +T + + KG +
Sbjct: 108 ELVSKLSVELAGKDAAADIAAFYFADKKRKFDFNYLVRQRGAHTDANMQVKGALMDEAQK 167
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+RG + G+A S D +++ ++P + S + H + K+ +
Sbjct: 168 VFRGTLDFIAGSAGSVGRENEDVIILSPGVRNRSVPLMLSGEGDVDGHHAVSIGKMDETK 227
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
LFY + RG+ A L+V + VL ++ E ++ I S+EG +
Sbjct: 228 LFYLMSRGLDLAEARRLVVEADLFPVLARISDEA---LKEEIAASIEGRI 274
>gi|256370752|ref|YP_003108577.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
SMDSEM]
gi|256009544|gb|ACU52904.1| putative FeS assembly protein SufD [Candidatus Sulcia muelleri
SMDSEM]
Length = 427
Score = 133 bits (334), Expect = 7e-29, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 118/307 (38%), Gaps = 15/307 (4%)
Query: 167 CEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKG-- 224
+ ++ + + D + +LN DG+++++P + + K
Sbjct: 108 KKSNSTIENFFGKTISNND-IFNSLNFLFSKDGAYIFLPDKICLKKTIYIINLYKIKNDF 166
Query: 225 TGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGD 284
+ R LII + S +E ++ + E+ + I+Y +
Sbjct: 167 SILNTRNLIILGKKSQAKIVE-FHESLTNKIFFSNYITEIYNKKESNIEYIKLYTNIAYS 225
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
K + +S + + + G++S F +AI
Sbjct: 226 Y--------LRNKTYITQKKKSICTLNNFSFEGKFLNENINFFSCGKKSKSYFNGLAILK 277
Query: 345 GF---QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDS 401
Q + + + HL N S ++K I G S ++ GK+ +H+ A + F + ++
Sbjct: 278 KKSIHQYVKINSLIDHLFSNCESYQLTKSILDGTSKGSFNGKIIIHKKANNIIAFQKNNN 337
Query: 402 LLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
+L+ N ++ P +E ++ H +T + +FY RGI ++ A ++++ +
Sbjct: 338 ILLNKNSYVYSNPELEIFANNVKCSHGSTLGTLEKNKIFYLCTRGIEKKIAKSILILLYA 397
Query: 462 REVLQKL 468
+++L+ +
Sbjct: 398 KKILKNI 404
>gi|291167137|gb|EFE29183.1| iron-regulated ABC-type transporter membrane component [Filifactor
alocis ATCC 35896]
Length = 351
Score = 133 bits (334), Expect = 8e-29, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 109/266 (40%), Gaps = 11/266 (4%)
Query: 218 FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH--AAVVELVALDNAEIKYS 275
F + + + + T IIA+E S VS + + + +V+ + A + AE+
Sbjct: 90 FSEDNQSSVIMDATYIIAEESSKVSVIFDYAEQMQQNSIETFRNSVIYVTAKEGAEVTIY 149
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
+ I + ++ Q+ETG+ ++ + + L +
Sbjct: 150 YISRNSKDHIALCSVI--------SQVYQDATVNLVQVETGAKRSFFHYTSNLLERGANT 201
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ +I ++ ++++ ++ H+ + + S I+ G + T++G + +G++HS+
Sbjct: 202 QIRTIYFADENRELNLAYEINHIGEQSESDILVNGALKDTAKKTFKGTIDFKKGSSHSKG 261
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ ++L+ +P + + H A+ K+ +E LFY + RG + A +
Sbjct: 262 REEEYAILLSEKVKNVAVPILLCQEDDVEGVHAASAGKMDEEILFYIMSRGFCLDDAKKI 321
Query: 456 IVNGFVREVLQKLPME-FAVEAQKLI 480
++ +L + + E K I
Sbjct: 322 VLESRFTPILDMIEDDSLKKEIWKEI 347
>gi|260886225|ref|ZP_05897488.1| iron-regulated ABC-type transporter membrane component [Selenomonas
sputigena ATCC 35185]
gi|260863944|gb|EEX78444.1| iron-regulated ABC-type transporter membrane component [Selenomonas
sputigena ATCC 35185]
Length = 289
Score = 133 bits (334), Expect = 8e-29, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 11/230 (4%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
A +E + VQ G+ N S+T +E G+
Sbjct: 67 HAEIEAHVEAGGTLSLVKVQLVPEGE--------NHADDVKVRVEEGGAFSYTIIEIGAN 118
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
S L G+ + + + ++ ++ D + +T + + KG +
Sbjct: 119 ELVSKLSVELAGKDAAADIAAFYFADKKRKFDFNYLVRQRGAHTDANMQVKGALMDEAQK 178
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+RG + G+A S D +++ ++P + S + H + K+ +
Sbjct: 179 VFRGTLDFIAGSAGSVGRENEDVIILSPGVRNRSVPLMLSGEGDVDGHHAVSIGKMDETK 238
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
LFY + RG+ A L+V + VL ++ E ++ I S+EG +
Sbjct: 239 LFYLMSRGLDLAEARRLVVEADLFPVLARISDEA---LKEEIAASIEGRI 285
>gi|329121302|ref|ZP_08249929.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component (SufB) [Dialister micraerophilus DSM
19965]
gi|327470236|gb|EGF15699.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component (SufB) [Dialister micraerophilus DSM
19965]
Length = 351
Score = 132 bits (333), Expect = 9e-29, Method: Composition-based stats.
Identities = 51/295 (17%), Positives = 110/295 (37%), Gaps = 12/295 (4%)
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+ +A+ + IP+ V+ + + K +I +E S + +
Sbjct: 61 IKTALEGHTYTIKIPENVKTKLTIEINTSEELKDFSGAFH--VILEESSELELV--WKYK 116
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
V+ NAE+K S +Q+ + S IY+ +R + +
Sbjct: 117 GEKNIATILTAVQYDVGKNAELKVSRIQDGFEDAS-----IYD---ERNIIMAENAHAEF 168
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
E G + L G S ++ +++G Q++D + + KNT I KG
Sbjct: 169 VAAEFGGKEVIVHSYAQLLGNNSSLFESAVYMASGNQKVDFFYHIDCIGKNTDGNIDVKG 228
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+ +S +RG ++ G + S ++ + ++P + H ++
Sbjct: 229 ALSDYSKKVFRGILNFINGCSGSVGDESDIAIQLDPTARNVSLPLLLCTEDDVQGNHASS 288
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
++ + L++ + RG + A +IV + ++ K+ E ++ I LE
Sbjct: 289 AGQLDNNVLYFLMTRGFTKTEARHIIVESLICPLIDKMDESIRDEVMNIVKIQLE 343
>gi|291459555|ref|ZP_06598945.1| iron-regulated ABC-type transporter membrane component
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291417833|gb|EFE91552.1| iron-regulated ABC-type transporter membrane component
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 335
Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 95/264 (35%), Gaps = 11/264 (4%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
+ +G I A+EGS ++ ++ ++ +L A
Sbjct: 69 KDALYISLHYGEGEQALNLFSIRAEEGSELTIFMDFSS---EKAGYAGVQTKLSIEKGAR 125
Query: 272 IKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGE 331
++ VQ + F G G ++ ++ ++ L G
Sbjct: 126 VRLIQVQRLGED--------FCFFHDIGAKTGEGAEFDEREILLSGRQSFHGIRTDLSGR 177
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+S E + +++D H+ + T SRI S G+ + +RG + + +GA
Sbjct: 178 ESRFESAIGYLLKKEERLDINLIANHIGEKTESRIDSDGVLRDHAFKLFRGTIDLRKGAK 237
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ LL+ + T+P I H A+ ++ ++ LFY RG+ +EA
Sbjct: 238 GAVGNEMETVLLMNDTVVNQTVPVILCDEEDVEGNHGASIGRLDEDMLFYMQSRGMEKEA 297
Query: 452 AIALIVNGFVREVLQKLPMEFAVE 475
++ + + V+ + E E
Sbjct: 298 VYEMMADAKIDAVINGISDEKLRE 321
>gi|213649929|ref|ZP_03379982.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
Length = 103
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 65/103 (63%), Positives = 82/103 (79%)
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
M+H+ KNT S I+SKGISAG S N+YRG V + A ++RNFTQCDS+LIG +CGAHT P
Sbjct: 1 MIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTFP 60
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
Y+E +N+S LE EATTS+I ++ LFYCLQRGI EE AI++IV
Sbjct: 61 YVECRNNSAQLELEATTSRIGEDQLFYCLQRGISEEDAISMIV 103
>gi|319938242|ref|ZP_08012639.1| hypothetical protein HMPREF9488_03475 [Coprobacillus sp. 29_1]
gi|319806535|gb|EFW03193.1| hypothetical protein HMPREF9488_03475 [Coprobacillus sp. 29_1]
Length = 301
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 88/276 (31%), Gaps = 18/276 (6%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
S +++ + K FE + L +D +
Sbjct: 33 SVFVFENQEPVEVQIVYILEADIKMNICFEIKKNVKVNFIETKVLSQGAVLHKDMHIDEN 92
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
AVV + + +N QN + +Y C Q
Sbjct: 93 AVVHIFSENNC-------QN--QETVECYENVYLKENAICQCGYAELSDGSYQGTY---- 139
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
L GE + + +S +Q + H +T ++ + G+
Sbjct: 140 -----HYYLDGEGADAKIRMAVLSKEQEQKHYEVLIQHNQPHTFGQMDNYGVVKDQGKLV 194
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
G ++ +G S ++ NC A PY+ H A K+ ++HL
Sbjct: 195 IDGIGTITKGQHGSAAHQTNKIMVFDANCIASANPYLYIDEYDVKASHAAGVGKMDEDHL 254
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
+Y RG+ ++ A+ LI G+++ V++ + E E
Sbjct: 255 YYLQSRGLSKKQAMHLITYGYLKPVIEVIDNEMLKE 290
>gi|313892669|ref|ZP_07826254.1| SufB/sufD domain protein [Dialister microaerophilus UPII 345-E]
gi|313118911|gb|EFR42118.1| SufB/sufD domain protein [Dialister microaerophilus UPII 345-E]
Length = 351
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/295 (17%), Positives = 110/295 (37%), Gaps = 12/295 (4%)
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+ +A+ + IP+ V+ + + K +I +E S + +
Sbjct: 61 IKAALEGHTYTIKIPENVKTKLIIEINTSEELKDFSGAFH--VILEESSELELV--WKYK 116
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
V+ NAE+K S +Q+ + S IY+ +R + +
Sbjct: 117 GEKNIATILTAVQYDVGKNAELKVSRIQDGFEDAS-----IYD---ERNIIMAENAHAEF 168
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
E G + L G S ++ +++G Q++D + + KNT I KG
Sbjct: 169 VAAEFGGKEVIVHSYAQLLGNNSSLFESAVYMASGNQKVDFFYHIDCIGKNTDGNIDVKG 228
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+ +S +RG ++ G + S ++ + ++P + H ++
Sbjct: 229 ALSDYSKKVFRGILNFINGCSGSVGDESDIAIQLDPTARNVSLPLLLCTEDDVQGNHASS 288
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLE 485
++ + L++ + RG + A +IV + ++ K+ E ++ I LE
Sbjct: 289 AGQLDNNVLYFLMTRGFTKTEARHIIVESLICPLIDKMDESIRDEVMNIVKIQLE 343
>gi|289422221|ref|ZP_06424077.1| iron-regulated ABC-type transporter membrane component
[Peptostreptococcus anaerobius 653-L]
gi|289157371|gb|EFD05980.1| iron-regulated ABC-type transporter membrane component
[Peptostreptococcus anaerobius 653-L]
Length = 276
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 10/255 (3%)
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
I+A+EG +S L + H + + A + + V +
Sbjct: 31 HNIVAEEGDNISTLFDINELSSENKARHTKI-NIEAKKGSNVDLYYVARCTDEEKA---- 85
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
+T + +++ Q+E G+ + L G++S S+ N +++D
Sbjct: 86 ----LTDIVADVAEDACVNFIQVEAGAHQAITNYTANLNGKKSQTNVESVYFVNKDKKLD 141
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+ H+ + T S ++ G + +RG + RG+ S+ + + L+
Sbjct: 142 INYIINHIGEETNSNLLINGALKDQAKKAFRGTIDFKRGSKLSKGAEEEYATLLDEGVRN 201
Query: 411 HTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
+P + + H A+ KI + LFY + RG+ ++A +IV + + KLP
Sbjct: 202 IAVPVLLCQEDDVEGLHAASAGKIDQDILFYIMSRGLDIDSAKKMIVETKLAPTIHKLPN 261
Query: 471 -EFAVEAQKLIDISL 484
E + K I+ +
Sbjct: 262 KELSESVWKHIEERI 276
>gi|331657658|ref|ZP_08358620.1| protein SufB [Escherichia coli TA206]
gi|331055906|gb|EGI27915.1| protein SufB [Escherichia coli TA206]
Length = 131
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 14 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 73
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
L AY WL M++P W + Y +++ D YY+AP + + +T
Sbjct: 74 LNAYHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPGAVQQT 126
>gi|210624178|ref|ZP_03294233.1| hypothetical protein CLOHIR_02189 [Clostridium hiranonis DSM 13275]
gi|210153165|gb|EEA84171.1| hypothetical protein CLOHIR_02189 [Clostridium hiranonis DSM 13275]
Length = 308
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 107/253 (42%), Gaps = 8/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDN 269
P ++ + + G I E + V+ + GC ++ H + V
Sbjct: 63 PEDVHIPVIVTQSGFSDKVYNDFIIGENAEVTIIAGCGIHNCGCDDSQHDGIHRFVLKKG 122
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++KY+ +++ G G I N VT ++ Q+ G T + L
Sbjct: 123 AKLKYTE-KHYGEGTEGGGKRILNPVTIVEMEEDSYCEMETVQIR-GVDSTKRDLEATL- 179
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ + +++ Q +S +++ ++++++++S+ + S + +V G
Sbjct: 180 GKNAKIVVLERLLTHDDQFAESNMEVVLQGEDSSAQVISRTVGQDNSVQVFNPRVI---G 236
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
QCDS+L+GN +IP I +++ L HEA KI+ + + + G+ E
Sbjct: 237 ENQCSAHVQCDSILMGN-AKISSIPEISAEHPDAMLVHEAAIGKIAGDQILKLMTLGLTE 295
Query: 450 EAAIALIVNGFVR 462
E A I+N F++
Sbjct: 296 EEAEQQILNCFLK 308
>gi|295698360|ref|YP_003603015.1| SufB/sufD domain protein [Candidatus Riesia pediculicola USDA]
gi|291157436|gb|ADD79881.1| SufB/sufD domain protein [Candidatus Riesia pediculicola USDA]
Length = 429
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 97/289 (33%), Gaps = 14/289 (4%)
Query: 185 DNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY---FRINEKGTGQFERTLIIAD--EGS 239
++ ++ + + ++ + L + + I E + + S
Sbjct: 129 EDPFSYITQFISNKVIYIRSQENSYPRRVLYIFNFSYGIEENRFSNINHCRYFLEILQNS 188
Query: 240 YVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRG 299
+ +E + ++ +N+ ++Y V + G
Sbjct: 189 KIKIIE-VFLSINRFSCFTNSLFTFSVEENSTLQYDRVNLENDQNLHHSYS--------G 239
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
S + + + GS + L G S +++ ++ + + H+
Sbjct: 240 ASLKRNSFLKYNNITLGSKDSQNIIKICLNGYNSRVNLNGLSLQKQSEKNSNYISIDHIC 299
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
S + ++ G S+ + + + + + S +L+ G N + P++
Sbjct: 300 PFGKSEQIYNMVTLGKSSISLKNNIQIFHQSPFSYGKILNRNLIFGKNSKVFSSPHLNIY 359
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
N + H T I +FY RGI E+ + +I+N F + L+K+
Sbjct: 360 NKESSCSHGVTVGNIDKSLIFYLCSRGISEDKSKEMIINSFFEKTLKKI 408
>gi|332799459|ref|YP_004460958.1| SufBD protein [Tepidanaerobacter sp. Re1]
gi|332697194|gb|AEE91651.1| SufBD protein [Tepidanaerobacter sp. Re1]
Length = 307
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 105/250 (42%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ I G II EG+ V+ + GC + H + E++ A++
Sbjct: 66 VHIPVLITMSGVVDVVYNTIIIGEGADVTVVAGCGIHNPGSKKSQHDGIHEIIVKKGAKM 125
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+Y ++ Y + N T + +++ Q++ G T + L E
Sbjct: 126 RY--LEKHYGEGEGSGERVLNPQTLVMMEQDSMAEMELVQIK-GVDSTVRDTKAKL-AEG 181
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++ Q+ S + + + +++VS+ ++ S +R V A+
Sbjct: 182 ASLIITERLLTHQNQEAVSDMTIELNGRGSNAKVVSRSVAKDNSKQVFR--PIVIARAS- 238
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
S+ +CDS+++ + + P I +++ L HEA +I++E L + G+ EE A
Sbjct: 239 SKGHVECDSIIM-DQGKISSTPAITAEHPDAQLTHEAAIGRIAEEQLLKLMTLGLSEEEA 297
Query: 453 IALIVNGFVR 462
+I+ GF++
Sbjct: 298 EDVILRGFLQ 307
>gi|303234860|ref|ZP_07321485.1| SufB/sufD domain protein [Finegoldia magna BVS033A4]
gi|302493978|gb|EFL53759.1| SufB/sufD domain protein [Finegoldia magna BVS033A4]
Length = 349
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 109/279 (39%), Gaps = 12/279 (4%)
Query: 203 YIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
Y + + + + + I+A++ S + + ++ ++V+
Sbjct: 69 YKTEENQVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRVVLDYRDNDDNKKFR-SSVI 127
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
E+ A +N+ ++ +Q + I N S + +Q E GS +
Sbjct: 128 EINAKENSNVELFVIQTEKNTTALES-VILNL--------DEESNVILSQYELGSKDNYV 178
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
L G+ S + SI ++G ++ ++ H K + S + G S ++
Sbjct: 179 NTKANLNGKHSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKS 238
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ +G+ S + ++L+ ++ + ++P + + H A+ KI + LFY
Sbjct: 239 TLDFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYI 298
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ R I + A ++IV E L KL E E KL+
Sbjct: 299 MNRAISRDVAESMIVESKFSESLSKLDDENLEE--KLLS 335
>gi|291542548|emb|CBL15658.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Ruminococcus bromii L2-63]
Length = 361
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 98/273 (35%), Gaps = 12/273 (4%)
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
F + G F + A E + ++ + N + A + A A+I+
Sbjct: 95 LFFNCKNGENAFADVELYAPENTELTVF-MTMQSAWNANGICALRTKFKAEKGAKIRLVQ 153
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
+ + F+ G + QL G T+ L G QS +
Sbjct: 154 LNLLSKN--------FRFINDVGAECEDNAATEILQLFIGGNETYTGTKATLLGRQSNLD 205
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
Q +D H+ K T S + + G+ ++ +RG + G++ ++
Sbjct: 206 LNVGYYCKDEQLLDMNYVAEHIGKKTVSSMNAGGVLRDKAHKLFRGTIDFPLGSSGAKGD 265
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
D L++G + T+P I H A+ + SD+ LFY RG+ EE A L+
Sbjct: 266 ENEDVLILGEDVINQTVPLILCAEEDVEGNHGASIGRPSDDVLFYLASRGLDEEEACNLM 325
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ + K+ E E + L LE G
Sbjct: 326 ARAKLDALCSKIGDE---ELETLAKSCLEEVTG 355
>gi|317504206|ref|ZP_07962199.1| FeS assembly protein SufD [Prevotella salivae DSM 15606]
gi|315664657|gb|EFV04331.1| FeS assembly protein SufD [Prevotella salivae DSM 15606]
Length = 138
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 362 TTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNS 421
TS + K + + + G+V V + A + + +L +T P +E
Sbjct: 1 CTSNELYKYVLDDHAVGAFAGRVLVRQEAQKTSSQETNQNLCAAKTARMYTQPMLEIYAD 60
Query: 422 SCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEAQKLI 480
H +T +++D LFY QRGI + A L+ FV EV+ K+ +E L+
Sbjct: 61 DVKCAHGSTVGQLNDAALFYMQQRGISLKEAKLLLEFAFVNEVIDKMELEPLRDRLHHLV 120
Query: 481 DISLEGSV 488
+ G +
Sbjct: 121 EKRFRGEL 128
>gi|257065356|ref|YP_003145028.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Slackia heliotrinireducens DSM
20476]
gi|256793009|gb|ACV23679.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Slackia heliotrinireducens DSM
20476]
Length = 413
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/402 (15%), Positives = 118/402 (29%), Gaps = 32/402 (7%)
Query: 62 YRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIRE 121
+ M P+W R++ D + P+ L+ V + L
Sbjct: 6 LQHVNAMPAPTWHRLKMNDTD------------VELPEGLEQVCSVAMDVDAALIADEGA 53
Query: 122 QEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVV 181
E+ G + V K + A +
Sbjct: 54 FELAMGEMQERFEAALAAAGPRVPLAGKPATSLDDTAYSNYQIAAAAAEAEEDVAATFET 113
Query: 182 PVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYV 241
+G++ +A L A P L + ++A S +
Sbjct: 114 GMGNDTHAFLLEAAGAPTVIATQPGQTGAKATLHIDGIDGALNAAAID---VVAAPDSEI 170
Query: 242 SYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ----NWYPGDSQGKGGIYNFVTK 297
+ P A + + A + + +TVQ +W D +G
Sbjct: 171 DVVIAFDTP-EAGTGAIGATLRVFAGARSRVGITTVQTVDNDWITMDDEG---------- 219
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+++ + + LRG+Q+ + + + + +ID + H
Sbjct: 220 --YMVDDDARVEVVHTVLAGKNAYVGMAGDLRGKQADIDVQTHYLGHDENEIDFNYVLRH 277
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
TT + ++G+ A S RG + + +GA + L+ + T+P I
Sbjct: 278 HGVRTTCELNAQGVLADASYKNLRGTIDLIKGAKGAVGHEVETVLITDDRAHNLTVPIIL 337
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
H AT I E LFY RG+ E A + +
Sbjct: 338 CSEDDVQGNHGATIGHIQPEQLFYLGSRGLSPEQAEDMFIRA 379
>gi|118444778|ref|YP_878603.1| hypothetical protein NT01CX_0094 [Clostridium novyi NT]
gi|118135234|gb|ABK62278.1| Uncharacterized protein family [Clostridium novyi NT]
Length = 306
Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 98/251 (39%), Gaps = 11/251 (4%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD-ENQLHAAVVELVALDNAEI 272
+ + + + S V+ + GC + H V ++ N +
Sbjct: 65 VHVPVIVTDVNATDKVYNTFKVGDNSDVNIVAGCGIHNCTAQTTEHEGVHDVHVGKNCHV 124
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI-TWKYPSCLLRGE 331
KY ++ Y ++N T G S ++ + K + L +
Sbjct: 125 KY--IEKHYAESDGKSQKVFN--TTTVIEVGEDSTFEMDLVQIKGVDNSKKELTINLH-K 179
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ ++ Q DS + ++++++IVS+ ++ S T+ + G
Sbjct: 180 NAHLIVTERIFTDEDQVADSKVNINLKGEDSSAQIVSRSVAKDNSRQTF---YFMMNGEN 236
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
SR +CDS+++GN +IP ++++ L HEA KI+ E L + G+ E+
Sbjct: 237 KSRGHIECDSIIMGN-ARVTSIPALDARCEDAELIHEAAIGKIASEQLMKLMSLGLTEKE 295
Query: 452 AIALIVNGFVR 462
A I+ GF++
Sbjct: 296 AEETILKGFLK 306
>gi|162448059|ref|YP_001621191.1| SUF system FeS cluster assembly protein, SufB-related [Acholeplasma
laidlawii PG-8A]
gi|161986166|gb|ABX81815.1| SUF system FeS cluster assembly protein, SufB-related [Acholeplasma
laidlawii PG-8A]
Length = 290
Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 62/165 (37%)
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+ + L G+ + +I +S+ M H A +++ + + G
Sbjct: 116 FIGGFVNNVMDAKLFLDLDGKGANLRVRTITVSSTNHSQKLDIHMTHYAPFSSAEMTNVG 175
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
I+ G + +G S F ++ + P + H AT
Sbjct: 176 IAGQNGIIKINGVGQIEQGMNGSSAFQTLKGIITNDKAQIDVNPILIIDEHDVTAGHAAT 235
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
K+ DE +FY RGI E A LI+NG+++ ++ ++ E E
Sbjct: 236 VGKMEDEVIFYLRSRGITLEDAQRLIINGYLQPIIDEIDDELIKE 280
>gi|213025182|ref|ZP_03339629.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 143
Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Query: 310 WTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSK 369
G+A+ + S L GE + S+A+ + D+ T + H SR + K
Sbjct: 13 SHSFLLGAAVLRHHSSSQLNGENATLRLNSLAMPVKNEVCDTRTWLEHNKGYCNSRQLHK 72
Query: 370 GISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEA 429
I + + G ++V + + + ++LL+G T P +E H A
Sbjct: 73 TIVSDKGRAVFNGLINVAQHSIKTDGQMTNNNLLLGKLAEVDTKPQLEIYADDVKCSHGA 132
Query: 430 TTSKISDEHLFYC 442
T +I DE Y
Sbjct: 133 TIGRIDDEQ--YL 143
>gi|300938993|ref|ZP_07153691.1| hypothetical protein HMPREF9530_03828 [Escherichia coli MS 21-1]
gi|300456096|gb|EFK19589.1| hypothetical protein HMPREF9530_03828 [Escherichia coli MS 21-1]
Length = 118
Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D ++ YK GF T + D+ KG+NE+++R ISAK+NEP+WMLE+R
Sbjct: 1 MSRNTEATDDIKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFR 60
Query: 59 LLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDP 106
L AYR WL M++P W + Y +++ D YY+AP +
Sbjct: 61 LNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEPA 108
>gi|14915771|gb|AAK73800.1| ORF470 [Eimeria falciformis]
Length = 234
Score = 130 bits (328), Expect = 4e-28, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 138/218 (63%), Gaps = 6/218 (2%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
EK+G+ +E ++ ++VD V DSVS+V T L K+G+IF+P + I P
Sbjct: 9 LEKIGLNTQESNTIS-----TLSVDVVLDSVSIVDTITNFLLKTGIIFIPFFDGINYFPY 63
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L+ Y+ T+V + DNF+A LNS +F+ GSF +I K ++C + LSTYFR + QFERT
Sbjct: 64 LIFSYVGTIVSLEDNFFATLNSIIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFERT 123
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + V Y EGC+AP E+QLH A+VE++ + + YSTVQNWY GD G+GG+
Sbjct: 124 LLIVSNSASVIYTEGCSAPIFLESQLHVALVEILVKNKGTLNYSTVQNWYRGDQSGEGGL 183
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
YNF TKRG C + ++W Q+E GSAIT KYP +
Sbjct: 184 YNFTTKRGWCL-KDASLNWVQIEMGSAITRKYPVYIFN 220
>gi|302380876|ref|ZP_07269339.1| SufB/sufD domain protein [Finegoldia magna ACS-171-V-Col3]
gi|302311371|gb|EFK93389.1| SufB/sufD domain protein [Finegoldia magna ACS-171-V-Col3]
Length = 349
Score = 130 bits (328), Expect = 4e-28, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 110/279 (39%), Gaps = 12/279 (4%)
Query: 203 YIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
Y + + + + + I+A++ S + + ++ ++V+
Sbjct: 69 YKTEENQVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRVVLDYRDNDDNKKFR-SSVI 127
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
E+ A +N+ ++ +Q + I N S + +Q E GS +
Sbjct: 128 EINAKENSNVEVFVIQTEKNTTALES-VILNL--------DEESNVILSQYELGSKDNYV 178
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
L G+QS + SI ++G ++ ++ H K + S + G S ++
Sbjct: 179 NTKANLNGKQSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKS 238
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ +G+ S + ++L+ ++ + ++P + + H A+ KI + LFY
Sbjct: 239 TLDFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYI 298
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ R I + A ++IV E L KL E E KL+
Sbjct: 299 MNRAISRDVAESMIVESKFSESLSKLDDENLEE--KLLS 335
>gi|160913599|ref|ZP_02076289.1| hypothetical protein EUBDOL_00075 [Eubacterium dolichum DSM 3991]
gi|158434060|gb|EDP12349.1| hypothetical protein EUBDOL_00075 [Eubacterium dolichum DSM 3991]
Length = 303
Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 9/255 (3%)
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVAL 267
E+ + + G EG+ V + GC + H V
Sbjct: 57 TIGEEVHIPVILTDSGIHDLVYNDFYIGEGADVVIIAGCGIHNDGCDTSQHDGVHVFHIG 116
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
NA+I+Y V+ Y + I N T G +++ +Q+ + K +
Sbjct: 117 KNAKIRY--VEKHYGEGNGSGERILNPKTIIHMEEGSFAQMDMSQI--KGVDSTKRDTLA 172
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
G + +++G Q+ S K+ +++ +IVS+ + S + +
Sbjct: 173 NVGANAKLVINEKLMTHGKQEAYSDVKVNLNGEDSVVQIVSRSVGKDTSIQVFH---PIA 229
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
G SR QCDS+L+ + +IP I + + + HEA KI+ + L G+
Sbjct: 230 VGNTRSRAHIQCDSILM-DQAKISSIPEIAANHVDAQIVHEAAIGKINSDQLMKLQTFGL 288
Query: 448 PEEAAIALIVNGFVR 462
E A +IV GF++
Sbjct: 289 DVEEAEKVIVEGFLK 303
>gi|313793927|gb|EFS41951.1| conserved domain protein [Propionibacterium acnes HL110PA1]
Length = 135
Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 366 IVSKGISAGFS-NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ +G G ++ + G V + A + +L++ C A +P +E + +
Sbjct: 1 MDFRGCLQGKDAHSVWIGDVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIR 60
Query: 425 -LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM-EFAVEAQKLIDI 482
H A+T + E LFY RG+ E A L+V+GF ++++K+ + E + E I+
Sbjct: 61 GAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEA 120
Query: 483 SLEGSVG 489
L S+G
Sbjct: 121 ELVESLG 127
>gi|283797713|ref|ZP_06346866.1| ABC transporter system permease [Clostridium sp. M62/1]
gi|291074609|gb|EFE11973.1| ABC transporter system permease [Clostridium sp. M62/1]
gi|295092063|emb|CBK78170.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Clostridium cf. saccharolyticum K10]
Length = 305
Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 107/262 (40%), Gaps = 10/262 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAA 260
+YI G + + +++ G + +G+ V+ + GC D + H
Sbjct: 53 IYIKPGTKNE-SVHIPVVLSQSGLTETVYNDFYIGDGADVTIVAGCGIHNGGDASSRHDG 111
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ A+I+Y V+ Y I N VT S + ++ +
Sbjct: 112 IHRFFIGKGAKIRY--VEKHYGSGDGNGKRIMNPVT--EVTMDEGSYMEMETVQIKGVDS 167
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
K + + G ++ +++G Q +S + +++++ ++S+ ++ S+ Y
Sbjct: 168 TKRETKAVLGREARIVIKERLMTHGNQDAESRFHVDLNGEDSSANVISRSVARDHSHQLY 227
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
++ G + T+CD++++ +P + + N L HEA KI+ E L
Sbjct: 228 ISNIT---GNSRCSGHTECDAIIMDE-ARIQAVPELTANNIDAALIHEAAIGKIAGEQLI 283
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
+ G+ E A A IVNGF++
Sbjct: 284 KLMTLGLTEAEAEAQIVNGFLK 305
>gi|269216596|ref|ZP_06160450.1| putative SufB/sufD domain protein [Slackia exigua ATCC 700122]
gi|269130125|gb|EEZ61207.1| putative SufB/sufD domain protein [Slackia exigua ATCC 700122]
Length = 423
Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats.
Identities = 67/400 (16%), Positives = 126/400 (31%), Gaps = 30/400 (7%)
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
M P+W R+ D + P ++ PE + + + E A
Sbjct: 12 MPAPTWHRLSMNGADIE------TPADLIQAHDAIVEVPEGESALSVTAVALTDLEGDAF 65
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+ + E + + + + ++V +
Sbjct: 66 DTAVDALSARTYATRISAQDLAGEADDDTDGVRDTAYSRYQIDAAETERAASVAAAFETG 125
Query: 188 YAALNSAVFTDGS----FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
A A + V P+G + T + ++A EG++V
Sbjct: 126 MGADARAFLLQAAGEVIVVEAPEGSEGAATVRLNGIDGAVNTAAVD---VVAHEGAHVDI 182
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN----WYPGDSQGKGGIYNFVTKRG 299
P A + + A +A ++ + +Q W D +G
Sbjct: 183 AIAFDTPT-KGVGAIGATLRVFAGKDAVVRVTAIQTADDSWQCFDDEG------------ 229
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+K+ G+ ++ +C LRG S + + + +G ++D + H
Sbjct: 230 YVLDESAKVEVRHTVLGAGESYTGLACDLRGTSSDIDVDTRYLGHGENELDFNYVIRHHG 289
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ T S + + G+ AG S T RG + + RG + L+ + T+P I
Sbjct: 290 QRTMSELNANGVLAGESVKTLRGTIDLIRGCKGANGHESETVLIADDGAHNRTVPVILCS 349
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
H AT I E FY RG+ +AA A+
Sbjct: 350 EDDVAGNHGATIGHIRPEQKFYLACRGLSPDAAEAMFARA 389
>gi|48478185|ref|YP_023891.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
gi|48430833|gb|AAT43698.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
Length = 400
Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats.
Identities = 85/429 (19%), Positives = 157/429 (36%), Gaps = 54/429 (12%)
Query: 56 EWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKL 115
E+R AY +L P + K ++ DV + +
Sbjct: 19 EYRKQAYIYYLKTPRPDY-------------------KESPTRKTYVDVPDDSIENMVYG 59
Query: 116 GIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKK 175
I + E + D+ + + + K V+ + A +L KK
Sbjct: 60 NIEGYDFEYKS-------------DADIFIKDLEIKRKTDNVLISDMKTAFKT-NELYKK 105
Query: 176 YLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIA 235
YLS G+ L +A + +G F+Y+P+ + + + + + +IIA
Sbjct: 106 YLSD--KYGNARLEYLINAAWLNGYFIYVPENSSISISIESL----NPSSSFTAKNVIIA 159
Query: 236 DEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFV 295
+ S V + + + H V ++A +NA +KY+ +Q D K + +F+
Sbjct: 160 GKNSSVEITDIYRSYGSEMA-THGRNVYIIAEENASVKYNYIQ-----DESNKINVISFI 213
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
S + I + P + + + Y + IS G Q +D
Sbjct: 214 RSYEMPYSSVSVYNVNTGG-SKVIYFSEPVMY---DNTYYKSYGVNISKGDQALDVQDNS 269
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
L + KNT + I ++G+ + G + + + S F +L+ A++ P
Sbjct: 270 LQIGKNTAADISTRGVILNNGTILHHGNIDIEEKSFKSTGFYDSSIILMSEKGYANSKPA 329
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV----LQKLPME 471
+ KN+ +H + S I +E + Y RGI A L +NGF+ + K E
Sbjct: 330 LLIKNNDTRSKHGSYISTIDEEKITYIRSRGISYSDARRLFINGFLSYIEEKGCSKKTAE 389
Query: 472 FAVE-AQKL 479
F E +L
Sbjct: 390 FLDEFINRL 398
>gi|218133324|ref|ZP_03462128.1| hypothetical protein BACPEC_01189 [Bacteroides pectinophilus ATCC
43243]
gi|217992197|gb|EEC58201.1| hypothetical protein BACPEC_01189 [Bacteroides pectinophilus ATCC
43243]
Length = 313
Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats.
Identities = 58/316 (18%), Positives = 106/316 (33%), Gaps = 20/316 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
K + V + N+ + P+ + N + +
Sbjct: 15 KTWYWLDVNETKLPWDRSNTVELESQTVTAAKAEKHAPVRIHV----NTVDEYSNKNIRL 70
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
A G ++ A E++A +N+ ++ Q+
Sbjct: 71 EAMTGGELTVF-----MNYGTRYNLAVHTEIIAHENSVVRLVQTQHTEENAV-------- 117
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ +++ Q+ G + L GE+S + I Q+ID
Sbjct: 118 LYNEIKGECAKGARVELIQVFLGKGDVYSDSRFELSGEKSSLKADIGYIGQHEQKIDINV 177
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
H + T S I + G S +RG + RGA ++ Q L++G++ TI
Sbjct: 178 VANHTGRETESEINAGGALKDASKKVFRGTIDFKRGAVNAVGNEQETVLMLGDDVQNKTI 237
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P I + H AT ++ D+ LFY RGI E A ++ + + + E
Sbjct: 238 PLILCAEENVVGNHGATIGELDDDTLFYFESRGIDREHAENIMARASIDRLSRMTEDE-- 295
Query: 474 VEAQKLIDISLEGSVG 489
E Q +I L+ +G
Sbjct: 296 -ETQNIISDGLKEVLG 310
>gi|225026843|ref|ZP_03716035.1| hypothetical protein EUBHAL_01096 [Eubacterium hallii DSM 3353]
gi|224955850|gb|EEG37059.1| hypothetical protein EUBHAL_01096 [Eubacterium hallii DSM 3353]
Length = 305
Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ I++ G E V+ + GC D H + E N++I
Sbjct: 64 VHIPVVISQTGLNDLVYNDFHIGEDCDVTIVAGCGIHNSGDGLSQHDGIHEFFVGKNSKI 123
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+Y ++ Y G + N T + Q++ G T + L+
Sbjct: 124 RY--IEKHYGQGDGKGGKVMNPKTIIHLDENAYFYMDTVQIK-GIDSTMRETDADLKA-G 179
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ E +++G Q + + + +++ +VS+ ++ S +R K+ G
Sbjct: 180 AKLEISEKLMTHGEQTAQTQFSVDLNGEGSSANVVSRSVARDDSAQLFRAKI---AGNNA 236
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
++CD++++ +N IP +E+ + L HEA KI+ E L + G+ EE A
Sbjct: 237 CAGHSECDAIIM-DNAKVRAIPELEANDLDAELIHEAAIGKIAGEQLIKLMTLGLSEEEA 295
Query: 453 IALIVNGFVR 462
+I++GF++
Sbjct: 296 EEMIISGFLK 305
>gi|332654148|ref|ZP_08419892.1| ABC transporter system permease involved in Fe-S cluster assembly
[Ruminococcaceae bacterium D16]
gi|332517234|gb|EGJ46839.1| ABC transporter system permease involved in Fe-S cluster assembly
[Ruminococcaceae bacterium D16]
Length = 305
Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 96/253 (37%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDN 269
+ +++ G + E V+ + GC +N H+ + N
Sbjct: 61 NESVHIPVVLSQSGLQETVYNDFFIGEDCDVTIVAGCGIHNCGVQNSEHSGIHTFYVGKN 120
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A ++Y V+ Y I N T G ++ TQ+ + +
Sbjct: 121 ARVRY--VERHYGEGDGMGENIMNPTTVVEMDEGSYMEMETTQI--KGVDSTIRTTKATL 176
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G +S +++G Q S + ++ + ++S+ ++ S + ++
Sbjct: 177 GPRSTLIIKEKVMTHGKQLAKSDFTVDLNGEDCHTNVISRSVAREDSKQVF--LARINGN 234
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A ++CD++++ N A IP + + L HEA KI+ E L + G+ E
Sbjct: 235 A-KCHGHSECDAIIMDNGVVA-AIPEVTANCVDAELIHEAAIGKIAGEQLIKLMTLGLTE 292
Query: 450 EAAIALIVNGFVR 462
+ A IVNGF++
Sbjct: 293 KEAEEQIVNGFLK 305
>gi|255513364|gb|EET89630.1| SufBD protein [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 428
Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats.
Identities = 54/381 (14%), Positives = 118/381 (30%), Gaps = 20/381 (5%)
Query: 88 YYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTT 147
YAA ++ ++ V + FD + +
Sbjct: 14 TYAANPFEKNELYKKYYLKIDPSEFDLTHTRPADKACEEKVNALSKELRIRFD-LVIYNG 72
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
+ + A DL+K + A S+ F DG + K
Sbjct: 73 IAFPPTNQNISVIHSKSATAHEMDLLKCN------DEQDKLAEFASSNFRDGIIISSSKD 126
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + F +N+ I S ++ E + E+ + ++
Sbjct: 127 KAETINI---FVMNDSNAFPNP-IAIDVVRDSALTINE-FYYSELKESAISTTTHKISIG 181
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCL 327
+++ + + G + ++ + GS + +
Sbjct: 182 GYGKLEMNAIHMESAKSVVMGLA--------KADVGPSASLNLNTIYIGSGMIRNRSELI 233
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
+ + + Q+ D T + + A+ T + + S +G +
Sbjct: 234 AKDTGADISSKEAILGKEGQRFDVLTYINNSAQKTNCNSETHAVLMDKSIAYVKGFAKII 293
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
+GA S++F + ++ G + + IP + H + + I E +FY RGI
Sbjct: 294 KGAGGSKSFVKERGIIYGKDAVINLIPDMSIDEGDVKATHSSAVAPIDQESIFYMCSRGI 353
Query: 448 PEEAAIALIVNGFVREVLQKL 468
E+ + LI NGF+ E++ +
Sbjct: 354 EEKKSKYLIANGFLNEIIGHI 374
>gi|229828846|ref|ZP_04454915.1| hypothetical protein GCWU000342_00931 [Shuttleworthia satelles DSM
14600]
gi|229792009|gb|EEP28123.1| hypothetical protein GCWU000342_00931 [Shuttleworthia satelles DSM
14600]
Length = 354
Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 10/247 (4%)
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+ I A S + + A + + + + +A +K TVQ+ G
Sbjct: 107 NQLEIHAAHDSEATVIVNLRALKDQKGDALVQIKYDIQ-KHAVLKLVTVQSAGQGLRVFF 165
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
G ++ TQ+ G + S L GE S + +
Sbjct: 166 DL--------GGQLADSARFELTQVILGGQSCYGNYSA-LEGESSSVSTEIAYLIGQDES 216
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
+D +H + T + + G+ + +RG + RGA + + LL+ ++
Sbjct: 217 LDMNYVAIHTGRKTDTVMKVSGVLEDNARKNFRGTIDFRRGAKGATGNELEEVLLMSDDV 276
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
TIP I + H A+ K+ + LFY RG+ + ++ + V K+
Sbjct: 277 VNQTIPVILCQEEDVEGNHGASIGKLDESLLFYLQSRGLSLDEIYQMMSRAKIEAVSSKI 336
Query: 469 PMEFAVE 475
+ E
Sbjct: 337 EDQKTRE 343
>gi|328948368|ref|YP_004365705.1| SufBD protein [Treponema succinifaciens DSM 2489]
gi|328448692|gb|AEB14408.1| SufBD protein [Treponema succinifaciens DSM 2489]
Length = 350
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 94/257 (36%), Gaps = 8/257 (3%)
Query: 219 RINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
++ +I A E S SY+ + N + ++A +N+ + V
Sbjct: 92 LFAQENEASVCDIIIHAKENSQASYIFVYKSEPELLNAQLGVRIRVLAQENSHVHICCVN 151
Query: 279 NWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFY 338
N + I T+LE G T+ L G +S
Sbjct: 152 LLGKNAVHFNSVGSN--------CKDNATIEITELELGGKKTFSGTFNSLEGYRSRFLGR 203
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+ + G +D L K++ SR G+ + T+RG + +G A S Q
Sbjct: 204 AAYVVKGESFLDMNQVALQTGKSSESRFSVDGVLLEKAKKTWRGTIDFKKGCADSVGDEQ 263
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
D LL+ + ++P I + H + K+ E LFY RG+ E+ A L+
Sbjct: 264 EDVLLLSPDVVNKSLPVILCDEEAVEGRHGCSIGKVDMEKLFYMQSRGVDEKTARELLTK 323
Query: 459 GFVREVLQKLPMEFAVE 475
V +V + +P E VE
Sbjct: 324 AKVSKVSRFIPDESLVE 340
>gi|224543040|ref|ZP_03683579.1| hypothetical protein CATMIT_02240 [Catenibacterium mitsuokai DSM
15897]
gi|224524065|gb|EEF93170.1| hypothetical protein CATMIT_02240 [Catenibacterium mitsuokai DSM
15897]
Length = 293
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 12/256 (4%)
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
++ + Y+ H ++ YS V N++ +
Sbjct: 42 HVVVDVKNEMSLHYVFEDNVHAEVIETRHVEENGVLNRTFTNGAYSHV-NFFNENEGTGK 100
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
Y S + E A + L GE + A+S ++
Sbjct: 101 NTY----LDEGHSFHDSMLQLGYSELSDASIEASYTFELDGEGADVRLRMAALSKNKEKK 156
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
+ H A +TT + + G++ ++ G ++ G S + ++ C
Sbjct: 157 HYKVHIKHNAPHTTGIMDNYGVAKDEAHLVIDGIGTITNGQNGSASHQTNKIIVFDPKCY 216
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
A P++ H A K+ +EHL+Y RG+ + A+ LI G++ V++
Sbjct: 217 ASANPFLYIDEYDVQASHAAGVGKMDEEHLYYLQSRGLTKRQAMQLITYGYLMPVVE--- 273
Query: 470 MEFAVEAQKLIDISLE 485
V ++I E
Sbjct: 274 ----VVDNQMIKERFE 285
>gi|218281162|ref|ZP_03487688.1| hypothetical protein EUBIFOR_00249 [Eubacterium biforme DSM 3989]
gi|218217608|gb|EEC91146.1| hypothetical protein EUBIFOR_00249 [Eubacterium biforme DSM 3989]
Length = 262
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 59/167 (35%), Gaps = 3/167 (1%)
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
L+ + E S + + ++ H A +T ++ + +
Sbjct: 94 NHYVDLQEPGAEYEILSGQLCQEHIEKVCDMEVRHNAPHTNGQMKNFAVLFDHGQYQMVA 153
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
++ +G +++ L +G IP + + H T + + L+Y
Sbjct: 154 NGNIKKGCFDAQSHQATRVLTLGQGHKTKVIPLLLIDENDVKASHALTIGQPDADQLYYL 213
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
RG+ + A+ L+ G+ V+ + E E + + +E VG
Sbjct: 214 QSRGLSTKQAVGLLSVGYFLPVIDLVEDE---ELKNSLRQEMESKVG 257
>gi|217076392|ref|YP_002334108.1| SufB/sufD domain protein [Thermosipho africanus TCF52B]
gi|217036245|gb|ACJ74767.1| SufB/sufD domain protein [Thermosipho africanus TCF52B]
Length = 374
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 8/214 (3%)
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N + +VA DNAE++ + + + N + ++ +
Sbjct: 151 NNFSNNTLRVVAEDNAEVEIYNIH----VSEENSFSVDN----IFIMVEDKVQVKVRDIY 202
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
G Y + G +S + + + D + + I ++G +
Sbjct: 203 IGGGKVAGYLGVKMNGNESNVDVKPYFLGSKSAIFDLQYLLRFVGLENKGSIKAEGALSD 262
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ +RG + + RGA +S +L+ + IP + + H A+++ +
Sbjct: 263 EAKVVFRGILDLKRGAKNSEAEEMERCILLSKDSKMEAIPSLLVDENEVTASHAASSAPL 322
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
++ +FY + RG + A + I+NG ++ +L
Sbjct: 323 DEDAIFYLMSRGFNRKEAKSFILNGIFENLINEL 356
>gi|15834683|ref|NP_296442.1| hypothetical protein TC0058 [Chlamydia muridarum Nigg]
gi|270284850|ref|ZP_06194244.1| hypothetical protein CmurN_00300 [Chlamydia muridarum Nigg]
gi|270288878|ref|ZP_06195180.1| hypothetical protein CmurW_00310 [Chlamydia muridarum Weiss]
gi|301336229|ref|ZP_07224431.1| hypothetical protein CmurM_00295 [Chlamydia muridarum MopnTet14]
gi|7190095|gb|AAF38944.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 393
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 101/276 (36%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRI-----NEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G + L + N+ + I +G+ +S
Sbjct: 120 EEGTVIYIPEGQKFEAPLVVHHHYVGSEENDYKKMSAPYFVFILGKGASISI--EMETMT 177
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ TV+++ G + + V ++G C ++ S
Sbjct: 178 IPQNFHLFGQTLGFLGEEAEL-ILTVKSFPKGTERVVWSHHVEVERKGACAVVQEMRSMG 236
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
+ +A + LRGE + GE + G + M H A+ T+SR + I
Sbjct: 237 KGWFRNAFS-------LRGESAHGESLVKVL--GGDCLGVHNTMYHDARATSSRQNIRSI 287
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
+ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 288 LDEGYFA-FEGGIHISPQGTLSNAYQKHDTLLLSNRASAATFPRLEILTDDVKASHGATV 346
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 347 GSLNAHLLTYLRSRGFSLMDAKQTLQKSFLALDIEK 382
>gi|147866701|emb|CAN79416.1| hypothetical protein VITISV_000220 [Vitis vinifera]
Length = 164
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 68/194 (35%), Gaps = 36/194 (18%)
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
+G ++ TG ++ + G + E + +S G
Sbjct: 1 MTMQGSSGPYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVG------------- 47
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
+ G + V+R A + SLL+ + P ++
Sbjct: 48 ------------------QAVFDGXIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQI 89
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP---MEFAVE 475
H A S + + LFY L RGI E A ++ F EV+++LP + VE
Sbjct: 90 IADDVKCSHGAAISDLEENQLFYFLARGIDLETARKXLIFSFGGEVIERLPYSSIRKKVE 149
Query: 476 --AQKLIDISLEGS 487
+ L++ +L+GS
Sbjct: 150 THIKALLEPTLKGS 163
>gi|169824168|ref|YP_001691779.1| putative iron-regulated ABC transporter [Finegoldia magna ATCC
29328]
gi|167830973|dbj|BAG07889.1| putative iron-regulated ABC transporter [Finegoldia magna ATCC
29328]
Length = 349
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 109/279 (39%), Gaps = 12/279 (4%)
Query: 203 YIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
Y + + + + + I+A++ S + + ++ ++V+
Sbjct: 69 YKTEENQVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRIVLDYRDNDDNKKFR-SSVI 127
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
E+ A +N+ ++ +Q + I N S + +Q E GS +
Sbjct: 128 EINAKENSNVELFVIQTEKNTTALES-VILNL--------DEESNVILSQYELGSKDNYV 178
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
L G+ S + SI ++G ++ ++ H K + S + G S ++
Sbjct: 179 NTKANLNGKHSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKS 238
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ +G+ S + ++L+ ++ + ++P + + H A+ KI + LFY
Sbjct: 239 TLDFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYI 298
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+ R I + A ++IV E L +L + E KL+
Sbjct: 299 MNRAISRDVAESMIVESKFSESLSRLDDKNLEE--KLLS 335
>gi|14915783|gb|AAK73806.1| ORF470 [Eimeria sevilletensis]
Length = 234
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 138/218 (63%), Gaps = 6/218 (2%)
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
EK+G+ I+E ++ +++D V DSVS+V T L K+G+IF+P + I P
Sbjct: 9 LEKIGLNIQESNTIS-----TLSIDVVLDSVSIVDTITNFLLKTGIIFIPFFDGINYFPY 63
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
L+ Y+ +V + DNF+A LNS +F+ GSF +I K ++C + LSTYFR + QFERT
Sbjct: 64 LIFSYIGMIVSLEDNFFATLNSIIFSGGSFCFIAKNIKCNINLSTYFRTQSEDFAQFERT 123
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
L+I + V Y EGC+AP E+QLH A+VE++ + + YSTVQNWY GD G+GG+
Sbjct: 124 LLIVSNSASVIYTEGCSAPIFLESQLHVALVEILVKNKGTLNYSTVQNWYRGDQSGEGGL 183
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
YNF TKRG C + ++W Q+E GSAIT KYP +
Sbjct: 184 YNFTTKRGWCL-KDASLNWVQIEMGSAITRKYPVYIFN 220
>gi|291533638|emb|CBL06751.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Megamonas hypermegale ART12/1]
Length = 306
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 107/285 (37%), Gaps = 21/285 (7%)
Query: 179 TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEG 238
T+ D + A T YIP +++ G + +
Sbjct: 42 TITKKEDKDGIDIRIAPGTKKEVCYIP------------VIMDKSGVNELVYNDFFIGDD 89
Query: 239 SYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
V+ + GC + + H + N+++KY ++ Y I N T
Sbjct: 90 CDVTIVAGCGIHNCGNADSEHDGIHAFYIGKNSKVKY--LEKHYGSGDGDGKRIMNPTTI 147
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
S + + + K + G+ S +++G Q +S ++
Sbjct: 148 --VEMDENSYMEMETTQIRGINSTKRITKGTVGKNSTLIVKEKLLTHGNQYAESDFEVNL 205
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+N+ S I+S+ ++ S + K+ G ++CD++++ + IP I+
Sbjct: 206 DGENSHSNIISRAVAQEKSKQIFIAKIY---GNNKCHGHSECDAIIMDD-ATISAIPEIK 261
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ + NL HEA KI+ E L + G+ E+ A I+NGF++
Sbjct: 262 ANHPESNLIHEAAIGKIAGEQLIKLMSLGLTEKEAENQIINGFLK 306
>gi|282856554|ref|ZP_06265828.1| SufB/sufD family protein [Pyramidobacter piscolens W5455]
gi|282585620|gb|EFB90914.1| SufB/sufD family protein [Pyramidobacter piscolens W5455]
Length = 352
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 8/210 (3%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
++ N+ ++ +Q GG F G +++ QL G +
Sbjct: 134 TKMALGRNSLLRLVQIQRL--------GGALTFFNDVGARCADGARVELIQLALGGGSVF 185
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
C L G S + + G +++D LH + T S I + G+ + +R
Sbjct: 186 MGAQCALEGRGSALKADIGYLLRGTERLDMNYTALHEGRRTQSGINASGVLRDKAFKLFR 245
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + RGAA + + D LL+ + TIP I +H AT ++ D LFY
Sbjct: 246 GTIDFRRGAAQASGSEKEDVLLMDDGVVNRTIPLILCGEDDVEGDHGATVGRLDDRLLFY 305
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPME 471
RG+ E A ++ V V ++P E
Sbjct: 306 LESRGLNREDAYEMMARARVAAVAARIPDE 335
>gi|239626731|ref|ZP_04669762.1| SufBD protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516877|gb|EEQ56743.1| SufBD protein [Clostridiales bacterium 1_7_47FAA]
Length = 307
Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 94/250 (37%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ ++ G + + + V + GC D++ H + NA +
Sbjct: 66 VHIPVVVSASGLKEMVYNDFFIGDDADVVIVAGCGIHNCGDQDSEHDGIHRFFVGRNARV 125
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y I N T S + ++ + +
Sbjct: 126 KY--VEKHYGEGDGEGKRILNPGT--EVYMEENSYMEMEMVQIKGVDSTNRTNTAELAAG 181
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q +S + ++++ +VS+ ++ S T+ + A
Sbjct: 182 AKLIVRERLLTHGTQDAESTYIVNLNGDDSSADVVSRSVAKDRSKQTFN--SKIVGNA-K 238
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
T+CD++++ + IP + + + L HEA KI+ E + + G+ EE A
Sbjct: 239 CSGHTECDAIIMDD-AKIFAIPGLIANDIDAALIHEAAIGKIAGEQIVKLMTLGLTEEEA 297
Query: 453 IALIVNGFVR 462
A IVNGF++
Sbjct: 298 EAQIVNGFLK 307
>gi|85859147|ref|YP_461349.1| ABC transporter system permease involved in Fe-S cluster assembly
[Syntrophus aciditrophicus SB]
gi|85722238|gb|ABC77181.1| ABC transporter system permease involved in Fe-S cluster assembly
[Syntrophus aciditrophicus SB]
Length = 306
Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 56/316 (17%), Positives = 116/316 (36%), Gaps = 11/316 (3%)
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
+ L K + + E I + ++K + ++A T P
Sbjct: 1 MLDALDKDLLKAVADLEDIPKGAYNIRKNGKLLTRATTANIDIESNADGTGIVVTIAPGT 60
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL-HAAVVELVA 266
+ +++ G I +G+ V+ + GC + HA + E
Sbjct: 61 K--DESVHIPVILSQAGLYDVVYNNFIIGDGADVTIVAGCGIHCGTASPEGHAGIHEFRV 118
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
A++KY V+ Y + N TK G ++++ TQ+ +
Sbjct: 119 GKGAKVKY--VEKHYATGAGSGRRTLNPTTKVFLAEGAQAEMELTQIGGVDEANRVNEAT 176
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
S ++ Q S ++ N+ + ++S+ + G SN + +
Sbjct: 177 --LEANSLLMIMERVLTEKEQSAVSKNEIRLAGDNSRANMISRSVIKGNSNQNFYATIEA 234
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+CD++++ N TIP +++K+S L HEA+ KI+ + L + G
Sbjct: 235 LAKCFG---HIECDAIIMDNG-TNETIPSLKAKHSDAELTHEASIGKIASDQLMKLMSLG 290
Query: 447 IPEEAAIALIVNGFVR 462
+ + A+ I+ GF++
Sbjct: 291 LSYDDAVNRIIQGFLK 306
>gi|282882735|ref|ZP_06291342.1| FeS assembly protein SufD [Peptoniphilus lacrimalis 315-B]
gi|300813441|ref|ZP_07093786.1| SufB/sufD domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|281297396|gb|EFA89885.1| FeS assembly protein SufD [Peptoniphilus lacrimalis 315-B]
gi|300512458|gb|EFK39613.1| SufB/sufD domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 348
Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 97/244 (39%), Gaps = 11/244 (4%)
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
YF+ ++ + IIA EGS + + + + ++ ++A + E+
Sbjct: 86 CYFKTDDDNPNLVDVQDIIAHEGSKIKVFLDY-YSEGKKEKFRNTLIRILAEKDTEVSLF 144
Query: 276 TVQNWYPGDSQ-GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
+Q GI+ +K++ Q + G + CLL G++S
Sbjct: 145 VIQREGSEAKSLESIGIFAH---------ENAKVNLCQYQLGCGKLYTNYKCLLDGKKSE 195
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
S+ G ++++ +M H + TTS I+ G + ++ + G +
Sbjct: 196 AHVNSVYFGQGEEELNLFYEMTHKGEKTTSSILVNGALKDKAYKNFKSNLDFLEGCNDAV 255
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
++L+ ++ + ++P + H +++ KI + LFY + RG + A A
Sbjct: 256 GSEGEFAVLLSDDVHSISVPLMLCHEDDVEGNHASSSGKIDPQILFYIMSRGFSYDEAEA 315
Query: 455 LIVN 458
LI+
Sbjct: 316 LIIE 319
>gi|114566209|ref|YP_753363.1| hypothetical protein Swol_0665 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337144|gb|ABI67992.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 307
Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 100/250 (40%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ + G E + V+ + GC + H + E++ A +
Sbjct: 66 VHVPVILTNSGFHDRVYNTFKIAEDAEVTIIAGCGIHNDSHSDSSHNGIHEIIVGPRAHV 125
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY ++ Y I N T G ++ Q++ + E+
Sbjct: 126 KY--LEKHYGEGRGEGKRILNPTTVVRVEDGGSIEMEMVQIKGVDDTIRS--TIAYVQEK 181
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q+ +S ++ + ++I+S+ ++ S ++ + G
Sbjct: 182 GNLKVVERLLTHGQQKAESDIRVEIEGQGAAAQILSRSVAQDDSYQLFKAALV---GKNE 238
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+CD++L+ + +IP +E+++++ L HEA KI+ E L + G+ E+ A
Sbjct: 239 CTGHVECDAILM-DKAQIRSIPQLEAEDANAVLTHEAAIGKIAGEQLIKLMSLGLSEQEA 297
Query: 453 IALIVNGFVR 462
I I+ GF+R
Sbjct: 298 IDTILEGFLR 307
>gi|70933711|ref|XP_738190.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514200|emb|CAH79558.1| hypothetical protein PC106223.00.0 [Plasmodium chabaudi chabaudi]
Length = 269
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 150/304 (49%), Gaps = 51/304 (16%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 17 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 76
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 77 CPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDV 122
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 123 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 182
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL 257
+G E SYV YLEGCTA E+QL
Sbjct: 183 EG------------------------------------SEFSYVGYLEGCTALMYKESQL 206
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H A+VE++ + +KY T+QNWY GD G GG+YNF TKRG C +K+ W Q+E GS
Sbjct: 207 HIAIVEIIVKNYGYVKYYTLQNWYRGDYLGNGGLYNFTTKRGICF-YFAKLDWIQIELGS 265
Query: 318 AITW 321
ITW
Sbjct: 266 IITW 269
>gi|297587551|ref|ZP_06946195.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Finegoldia magna ATCC 53516]
gi|297574240|gb|EFH92960.1| iron-regulated ABC superfamily ATP binding cassette transporter
[Finegoldia magna ATCC 53516]
Length = 349
Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 101/249 (40%), Gaps = 12/249 (4%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I+A++ S + L ++ ++V+E+ A +N+ ++ +Q + I
Sbjct: 99 IVAEKNSSLRVLLDYRDNDDNKKFR-SSVIEINAKENSNVEVFVIQTEKNTTALES-VIL 156
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
N S + +Q E GS + L G+ S + SI ++G ++
Sbjct: 157 NL--------DEESNVILSQYELGSRDNYVNTKANLNGKHSNLDINSIYFTHGDSSLNML 208
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
++ H K + S + G S ++ + +G+ S + ++L+ ++ +
Sbjct: 209 YEINHFGKESKSSCIVNGALKESSYKNFKSTLDFKKGSMGSTGTEEEYAVLLSDDVKNLS 268
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEF 472
+P + + H A+ KI + LFY + R I + A ++IV E L +L E
Sbjct: 269 VPILLAGEDDVIGNHAASAGKIDADMLFYIMNRAISRDVAESMIVESKFSESLSRLDDEK 328
Query: 473 AVEAQKLID 481
KL+
Sbjct: 329 LE--NKLLS 335
>gi|296272412|ref|YP_003655043.1| SufBD protein [Arcobacter nitrofigilis DSM 7299]
gi|296096586|gb|ADG92536.1| SufBD protein [Arcobacter nitrofigilis DSM 7299]
Length = 345
Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 98/274 (35%), Gaps = 10/274 (3%)
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
C + +++ T + I D+ S V+ E + + +
Sbjct: 82 NKECKNPIVVLNYYDDENTIFEKDLKYIVDKNSDVTIFEIFISS--SKKNFINQKRDFDI 139
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
+++ ++Y +Q D K SK+ + G+ +
Sbjct: 140 DNSSNMEYVYLQKLSLEDF--------LNIKFNPIIREDSKLKFFNFNFGALNAYNQFDI 191
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
L S + ++ Q+I + +H KNT+S + + I S+ + K V
Sbjct: 192 NLDFLNSSFDMEALTTIAKKQEIANIVSTIHNGKNTSSSVKANHILDENSHGIFEVKARV 251
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+ A +S + L+G++ + P +E H ATT + ++ L+Y RG
Sbjct: 252 NNEANNSAVIQNSQTTLLGDDAIINANPRLEIFIDELTASHGATTGSLDEDILYYLQSRG 311
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ ++ A +++ +L K+ E K I
Sbjct: 312 LSKKQASKMMLEAIEHRILDKITNEKIKNIIKEI 345
>gi|304386164|ref|ZP_07368497.1| FeS assembly protein SufD [Pediococcus acidilactici DSM 20284]
gi|304327521|gb|EFL94748.1| FeS assembly protein SufD [Pediococcus acidilactici DSM 20284]
Length = 353
Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 57/164 (34%)
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W+ + L G S + ++ HL +
Sbjct: 181 VSARDANLDWSLWPQTKGQLLGDLNVTLAGTGSRATLNLARYGYQDDWVGIRGQIKHLGQ 240
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T SRI +G+ S + + GA+ + + + + + P +
Sbjct: 241 HTFSRINMRGVLYENSRVNFTSIGQIDHGASDADADQESRLMTVEPHAKGSVNPVLVIDE 300
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ H A+ + ++ L+Y RG+P A ++++ F+ +
Sbjct: 301 NDVRAGHAASVGQYDEDALYYLQSRGLPMATAKQILIDNFMEPI 344
>gi|270290642|ref|ZP_06196866.1| FeS assembly protein SufD [Pediococcus acidilactici 7_4]
gi|270280702|gb|EFA26536.1| FeS assembly protein SufD [Pediococcus acidilactici 7_4]
Length = 357
Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 57/164 (34%)
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
+ + W+ + L G S + ++ HL +
Sbjct: 185 VSARDANLDWSLWPQTKGQLLGDLNVTLAGTGSRATLNLARYGYQDDWVGIRGQIKHLGQ 244
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+T SRI +G+ S + + GA+ + + + + + P +
Sbjct: 245 HTFSRINMRGVLYENSRVNFTSIGQIDHGASDADADQESRLMTVEPHAKGSVNPVLVIDE 304
Query: 421 SSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREV 464
+ H A+ + ++ L+Y RG+P A ++++ F+ +
Sbjct: 305 NDVRAGHAASVGQYDEDALYYLQSRGLPMATAKQILIDNFMEPI 348
>gi|331270047|ref|YP_004396539.1| hypothetical protein CbC4_1868 [Clostridium botulinum BKT015925]
gi|329126597|gb|AEB76542.1| Uncharacterized protein family [Clostridium botulinum BKT015925]
Length = 306
Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 99/253 (39%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD-ENQLHAAVVELVALDN 269
+ ++ E ++ + GC + H + ++
Sbjct: 62 NESVHVPVIVSNVNAKDKVYNTFKVGENCEINIVAGCGIHNCTAQKTEHEGIHDIYIGKG 121
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ +KY ++ Y I+N T ++ Q++ G + K + L
Sbjct: 122 SHVKY--IEKHYAESDGKSQKIFNTKTIVEVQEDATFEMDVVQIK-GVDNSKKELNIKLH 178
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + ++ Q DS + + ++++++IVS+ ++ S T+ + +G
Sbjct: 179 -KNAHLIITERMFTDEEQVADSKVNIELVGEDSSAQIVSRSVAKDSSRQTF---YFMMKG 234
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
SR +CDS+++ + +IP +++ L HEA KI+ E L + G+ E
Sbjct: 235 DNKSRGHIECDSIIM-DKARVTSIPALDANCEDAELIHEAAIGKIASEQLMKLMSLGLTE 293
Query: 450 EAAIALIVNGFVR 462
+ A I+ GF++
Sbjct: 294 KEAENTILKGFLK 306
>gi|253681749|ref|ZP_04862546.1| SufBD protein [Clostridium botulinum D str. 1873]
gi|253561461|gb|EES90913.1| SufBD protein [Clostridium botulinum D str. 1873]
Length = 306
Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 99/253 (39%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD-ENQLHAAVVELVALDN 269
+ ++ E ++ + GC + H + ++
Sbjct: 62 NESVHVPVIVSNVNAKDKVYNTFKVGENCEINIVAGCGIHNCTAQKTEHEGIHDIYIGKG 121
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ +KY ++ Y I+N T ++ Q++ G + K + L
Sbjct: 122 SHVKY--IEKHYAESDGKSQKIFNTKTIVEVHEDATFEMDVVQIK-GVDNSKKELNIKLH 178
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + ++ Q DS + + ++++++IVS+ ++ S T+ + +G
Sbjct: 179 -KNAHLIITERMFTDEEQVADSKVNIELVGEDSSAQIVSRSVAKDSSRQTF---YFMMKG 234
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
SR +CDS+++ + +IP +++ L HEA KI+ E L + G+ E
Sbjct: 235 DNKSRGHIECDSIIM-DKARVTSIPALDANCEDAELIHEAAIGKIASEQLMKLMSLGLTE 293
Query: 450 EAAIALIVNGFVR 462
+ A I+ GF++
Sbjct: 294 KEAEDTILKGFLK 306
>gi|294881525|ref|XP_002769391.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239872800|gb|EER02109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 378
Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 98/267 (36%), Gaps = 29/267 (10%)
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
F ++ +EG+ ++ E A ++ A + ++ Q +
Sbjct: 132 ATFPNMSVVVEEGASLTLRESVDA---------GGRTQVYLQAGARLDHTLHQTRGDCST 182
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI-TWKYPSCLLRGEQSCGEFYSIAI-S 343
+ SK + T+L + + G + +S+ + +
Sbjct: 183 V-------------VRQDGGSKYNQTRLVIPDSDGATHTTDIEVNGPDCVSDVHSVHVVA 229
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+S + L+ T +R + + G S ++++ V++ A + +C +L
Sbjct: 230 REGVHTESDSNCNFLSTGTRARQTHRAVLCGPKSRSSWKSTFMVNKIAQQTDANQECKAL 289
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTS-KISDEHLFYCLQRGIPEEAAIALIVNGFV 461
L+ P + + + H A S I + LFY RG+P A L VNGF+
Sbjct: 290 LLDRTARMTARPELRIQADDVKVTHGAALSTTIDPKQLFYLTSRGVPRSRARWLYVNGFL 349
Query: 462 REVLQKLPMEFAVEAQKLIDISLEGSV 488
+ L ++ +E ++ + +E ++
Sbjct: 350 EDTLTRVDD---LEDREWLREKVEKAI 373
>gi|225572419|ref|ZP_03781283.1| hypothetical protein RUMHYD_00713 [Blautia hydrogenotrophica DSM
10507]
gi|225040122|gb|EEG50368.1| hypothetical protein RUMHYD_00713 [Blautia hydrogenotrophica DSM
10507]
Length = 305
Score = 126 bits (317), Expect = 7e-27, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 97/253 (38%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
L +++ G + +G V+ + GC + N H + N
Sbjct: 61 NESLHIPVILSQSGLNEVVYNDFFIGDGCEVTIVAGCGIDNCGNSNSQHDGIHRFYIGRN 120
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ +KY V+ Y I N T G S + ++ + K +
Sbjct: 121 SRVKY--VEKHYGSGDGMGKRIMNPET--VVELGEDSYMEMDTVQIKGVDSTKRLTQAKL 176
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + E +++G Q+ DS + + +++ +VS+ ++ S + + G
Sbjct: 177 AKGAKLEVMERLMTHGAQRADSHFDVEMNGEGSSANVVSRSVARDSSYQMFSSNII---G 233
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A T+CD++++ +P I + N L HEA KI+ E + + G+ E
Sbjct: 234 NAKCNGHTECDAIIMDE-AKISALPEITANNPDAALIHEAAIGKIAGEQIIKLMTLGLTE 292
Query: 450 EAAIALIVNGFVR 462
A IV+GF++
Sbjct: 293 SEAEEQIVSGFLK 305
>gi|160894001|ref|ZP_02074780.1| hypothetical protein CLOL250_01556 [Clostridium sp. L2-50]
gi|156864379|gb|EDO57810.1| hypothetical protein CLOL250_01556 [Clostridium sp. L2-50]
Length = 305
Score = 126 bits (317), Expect = 7e-27, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDN 269
+ +++ G E V+ + GC + H + N
Sbjct: 61 NESVHIPVLLSKSGLQDMVYNDFYIGEDCDVTIVAGCGIHNCGVDTSKHDGIHTFYIGKN 120
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++KY ++ Y I N T G ++ TQ++ + K S L+
Sbjct: 121 AKVKY--IERHYGEGDGNGENIMNPETIVHLEEGASMEMETTQIKGIDSTVRK-TSGDLK 177
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + E +++G Q + + K ++ +VS+ ++ S + + G
Sbjct: 178 -DNASLEIREKIMTHGKQYAKTDFDVDLNGKGCSANVVSRSVARDQSRQEFYSTI---NG 233
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
+ ++CD++++ ++ P + + N NL HEA KI+ E L + G+ E
Sbjct: 234 NNECKGHSECDAIIM-DSASVSASPKLTANNIDANLIHEAAIGKIAGEQLIKLMTLGLTE 292
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 293 AEAEEQIINGFLK 305
>gi|331082194|ref|ZP_08331321.1| hypothetical protein HMPREF0992_00245 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330402988|gb|EGG82553.1| hypothetical protein HMPREF0992_00245 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 305
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDN 269
+ ++E G + + V+ + GC ++ H + N
Sbjct: 61 NESIHIPVVLSEAGLKETVYNDFYIGDDCDVTIVAGCGIHCGTDDSSEHDGIHSFFIGKN 120
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+++KY V+ Y I N T G S + + + + +
Sbjct: 121 SKVKY--VEKHYGSGDGKGQRIMNPETIVEV--GENSYMEMDTAQIKGVDSTIRKTTVKL 176
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + + +++G Q+ +S + +N+ + I+S+ ++ S ++ V G
Sbjct: 177 DKNASVKVMERLMTHGEQRAESRFVVDLNGENSGANIISRSVAKDNSYQLFQS---VLNG 233
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
T+CD++++GN +IP I + NS L HEA KI+ E + + G+ E
Sbjct: 234 NEKCSGHTECDAIIVGN-AKISSIPEITANNSDAALIHEAAIGKIAGEQIIKLMTLGLTE 292
Query: 450 EAAIALIVNGFVR 462
E A I++GF++
Sbjct: 293 EEAEEQIISGFLK 305
>gi|289810655|ref|ZP_06541284.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 141
Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats.
Identities = 101/141 (71%), Positives = 120/141 (85%), Gaps = 1/141 (0%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
NF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + TGQFERT+++ADEGSYVSY
Sbjct: 2 ERNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILVADEGSYVSY 61
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+ GGI NFVTKR C G
Sbjct: 62 IEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNN-TGGILNFVTKRALCEG 120
Query: 304 MRSKISWTQLETGSAITWKYP 324
SK+SWTQ ETGSAITWKYP
Sbjct: 121 ENSKMSWTQSETGSAITWKYP 141
>gi|313898488|ref|ZP_07832025.1| SufB/sufD domain protein [Clostridium sp. HGF2]
gi|312956870|gb|EFR38501.1| SufB/sufD domain protein [Clostridium sp. HGF2]
Length = 306
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 100/270 (37%), Gaps = 9/270 (3%)
Query: 194 AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
A I + + + G EG+ V + GC
Sbjct: 45 AKTDKPGIDIIVDDNTVGESIHIPVILTDSGIQDMVYNDFYIGEGADVEIVAGCGIHNDG 104
Query: 254 ENQ-LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
+ H + NA I Y+ + Y S G I N T G +K+ +Q
Sbjct: 105 CDTSQHDGIHTFHIGRNASITYT--EKHYGEGSGSGGRILNPTTVIHMEEGSFAKMDMSQ 162
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
++ + K L G + +++G Q+ S + +++ +IVS+ +
Sbjct: 163 IKGVDSTFRK-TEANL-GATAKLVINEKLMTHGEQKAHSDVTVNLNGEDSVVQIVSRSVG 220
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
S + + G SR QCDS+++G +IP I + + + HEA
Sbjct: 221 KDTSVQVFH---PIAVGNNRSRAHIQCDSIIMG-KAKISSIPEIAANHVDAEIIHEAAIG 276
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
KI+++ L G+ E A +IV+GF++
Sbjct: 277 KINNDQLIKLQTFGLNSEEAEKVIVDGFLK 306
>gi|309774598|ref|ZP_07669623.1| ABC transporter system permease involved in Fe-S cluster assembly
[Erysipelotrichaceae bacterium 3_1_53]
gi|308917629|gb|EFP63344.1| ABC transporter system permease involved in Fe-S cluster assembly
[Erysipelotrichaceae bacterium 3_1_53]
Length = 251
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 95/250 (38%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEI 272
+ + + G EG+ V + GC + H + NA I
Sbjct: 10 IHIPVILTDSGIQDMVYNDFYIGEGADVEIVAGCGIHNDGCDTSQHDGIHTFHIGKNASI 69
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
Y+ + Y + G I N T G +K+ +Q++ + K L
Sbjct: 70 TYT--EKHYGEGTGSGGRILNPTTIIHMEDGAFAKMDMSQIKGVDSTFRK-TEANLNA-G 125
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q S + +++ +IVS+ + S + + G
Sbjct: 126 AKLVINEKLMTHGTQTAHSDVTVNLNGEDSVVQIVSRSVGKDSSVQVFH---PIAVGNNR 182
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
SR QCDS+++G +IP I + + + HEA KI+ + L G+ E A
Sbjct: 183 SRAHIQCDSIIMG-QAKISSIPEIAANHVDAEIVHEAAIGKINSDQLIKLQTFGLSSEDA 241
Query: 453 IALIVNGFVR 462
+IV+GF++
Sbjct: 242 EKVIVDGFLK 251
>gi|225375882|ref|ZP_03753103.1| hypothetical protein ROSEINA2194_01518 [Roseburia inulinivorans DSM
16841]
gi|225212317|gb|EEG94671.1| hypothetical protein ROSEINA2194_01518 [Roseburia inulinivorans DSM
16841]
Length = 305
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 103/258 (39%), Gaps = 9/258 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVEL 264
K + ++E G + EG+ V+ + GC + H +
Sbjct: 56 KPGTVNESVHIPVVLSESGLQECVYNDFYIGEGADVTIVAGCGIHNCGVDTSKHEGIHTF 115
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
NA++KY ++ Y + N T G ++ TQ+ +
Sbjct: 116 YLEKNAKVKY--IERHYGEGDGNGENVMNPQTIVHLKEGAHMEMETTQI--KGIDSTVRI 171
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ + + E + +++G Q + + K+ + +VS+ ++ G S +
Sbjct: 172 TKGDLADGASLEVHEKIMTHGKQYAKTDFAIDMNGKDCSCNLVSRSVAKGESRQEF---F 228
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
S+ G A ++CD++++ + C + P + + N NL HEA KI+ E L +
Sbjct: 229 SIMNGNAACAGHSECDAIIMDHGCVTAS-PQLTANNIDANLIHEAAIGKIAGEQLIKLMT 287
Query: 445 RGIPEEAAIALIVNGFVR 462
G+ E+ A I+NGF++
Sbjct: 288 LGLTEKEAEEQIINGFLK 305
>gi|295111461|emb|CBL28211.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Synergistetes bacterium SGP1]
Length = 308
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 9/229 (3%)
Query: 235 ADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
EGS V+ + GC ++ H V NA++KY V+ Y I N
Sbjct: 88 VGEGSDVTIVAGCGIDNCGVQDSEHDGVHRFYVGKNAKVKY--VEKHYGSGDGTGKRILN 145
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
VT+ G ++ Q+ + + + + +++G Q S
Sbjct: 146 PVTEVYMEEGSSVEMEMAQI--KGVDSTNRTTLAELKKDARLVVRERLMTHGEQHAVSTY 203
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
K+ + ++ +VS+ I+ S + + A + T+CDS+++ +
Sbjct: 204 KVTLQEEGGSADVVSRSIARDRSYQRFDAC--IVGNAP-CKGHTECDSIIMDEG-TILAV 259
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
P +E+ + +L HEA KI+ E L + G+ E+ A I+NGF+
Sbjct: 260 PSLEAHHVDASLVHEAAIGKIAGEQLIKLMTLGLTEQQAEEEIINGFLA 308
>gi|325831633|ref|ZP_08164850.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
gi|325486504|gb|EGC88953.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
Length = 409
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 69/201 (34%), Gaps = 8/201 (3%)
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
+ A +A + + Q G + + G R+++ G+ +
Sbjct: 187 RVFAGADARVDVAVTQTLDDG--------WVALDDTGIVASERARVQVRHTVLGAGRAYT 238
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
LRG+ + + + + + QQ D + T + + G+ AG S T RG
Sbjct: 239 GLDADLRGDDARLDIDTRYLGHASQQRDFNYVAHQRGRRTVCNLDANGVLAGESEKTLRG 298
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ + G S Q LL T+P I H AT + E LFY
Sbjct: 299 TIELVHGCKGSVGSEQETVLLADERVANRTVPVILCDEDDVAGNHGATIGHVRPEQLFYL 358
Query: 443 LQRGIPEEAAIALIVNGFVRE 463
RGI E A L + E
Sbjct: 359 ASRGISPEDAERLFITASFEE 379
>gi|325118082|emb|CBZ53633.1| putative sufB/sufD domain-containing protein [Neospora caninum
Liverpool]
Length = 1306
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 10/214 (4%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ +V +AE+ + Q + S ++ G+
Sbjct: 1069 NSNTRIVLEPDAEMHHIYDQEQAVDSWHLENL--------SVQMHKNSTYVLRHVDLGAH 1120
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
E S +A+ NG Q+ HL + K + G +
Sbjct: 1121 AARFNLQVE-GAESSHHTSLGLAVLNGRQEHGKYEMFHHLKPRGETSQTMKSLIGGKARA 1179
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS-CNLEHEATTSKISDE 437
+RG++ + R + + +L+ + IP +E H A + E
Sbjct: 1180 VWRGRIRIEREGTGTSAESLNRVVLLDDGSRCVAIPTLEIIPDDVVKANHGAMIRDLDVE 1239
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
LF+ + RGI E A +++ + +V+ + E
Sbjct: 1240 PLFFLMSRGIDELEARKMLMKAYAEDVISPVQDE 1273
>gi|238921896|ref|YP_002935410.1| hypothetical protein EUBELI_20130 [Eubacterium eligens ATCC 27750]
gi|238873568|gb|ACR73276.1| Hypothetical protein EUBELI_20130 [Eubacterium eligens ATCC 27750]
Length = 356
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 86/249 (34%), Gaps = 9/249 (3%)
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
K I E + + + A L A ++ I+ +Q
Sbjct: 103 KSNADINVVGIETKENASIDVYMDFNGDKD-GEGFAAVQTRLYAAKDSVIRLIQIQRVGS 161
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAI 342
F+ G ++I QL ++ L G+ S +
Sbjct: 162 E--------TTFINDIGGYCEDGARIELVQLYLSGKNRYEGCEIKLAGDGSSMSAEIGYV 213
Query: 343 SNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+ G +++D + H+ K T I + G + +RG + +G+A S + + L
Sbjct: 214 AAGKERLDMNYCVRHIGKKTECAINAAGALRDTAFKLFRGTIDFIKGSAGSVGNEKEEVL 273
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
LI C TIP I H AT K +E LFY RGIP + ++ +
Sbjct: 274 LIDEKCVNQTIPIILCAEEDVVGNHGATIGKPDEELLFYLESRGIPAQECYNMLAAAKLL 333
Query: 463 EVLQKLPME 471
V K+P +
Sbjct: 334 AVCGKIPDD 342
>gi|154496396|ref|ZP_02035092.1| hypothetical protein BACCAP_00685 [Bacteroides capillosus ATCC
29799]
gi|150274479|gb|EDN01556.1| hypothetical protein BACCAP_00685 [Bacteroides capillosus ATCC
29799]
Length = 305
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 9/249 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ + + G E V + GC E H + NA +
Sbjct: 64 VHIPVIVTQTGLKDLVYNDFYIGEDCDVDIVAGCGIHNSGCETAEHDGIHTFYVGKNARV 123
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+Y V+ Y I N T G + I + + K + ++ G
Sbjct: 124 RY--VEKHYGEGEGTGQRILNPQTVVYLEEG--AFIQLDTTQIKGVDSTKRETKIVVGPH 179
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q +S +++ ++ + R++S+ ++ S + + A
Sbjct: 180 AEAVVNEKLLTHGSQTAESDMEIILDGEDASGRVISRSVAQDSSQQVFY--PRMTGNA-K 236
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
QCDS+++G+ +IP I + + L HEA +I+ + + + G+ EE A
Sbjct: 237 CFGHVQCDSIIMGD-AKISSIPAISANHVDAQLVHEAAIGRIAGDQITKLMTLGLTEEEA 295
Query: 453 IALIVNGFV 461
I+NGF+
Sbjct: 296 EERILNGFL 304
>gi|325679883|ref|ZP_08159452.1| SufB/sufD domain protein [Ruminococcus albus 8]
gi|324108321|gb|EGC02568.1| SufB/sufD domain protein [Ruminococcus albus 8]
Length = 296
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 66/166 (39%)
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ QL G T L G SC + + +G +++D H K +
Sbjct: 111 AENAAFELVQLYIGGKDTVSGIYADLAGRNSCFKADIGYLLDGDEKLDINLVASHAGKKS 170
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S I KG+ G S T+RG + G++ ++ + LL+ T+P I
Sbjct: 171 QSEISVKGVMRGSSEKTFRGTIDFLNGSSGAKGAENEEVLLLDETVRNKTVPLILCAEED 230
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
H A+ +I + +FY RGIP + L + +V+ K+
Sbjct: 231 VEGSHGASIGRIDEAQIFYMQSRGIPVDKIYELTARSRIAQVVSKI 276
>gi|182417423|ref|ZP_02948751.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium butyricum 5521]
gi|237669082|ref|ZP_04529066.1| SufBD protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378737|gb|EDT76263.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium butyricum 5521]
gi|237657430|gb|EEP54986.1| sufB/sufD domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 305
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 108/262 (41%), Gaps = 10/262 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAA 260
+YI + + + +++ G + E + V+ + GC + H
Sbjct: 53 IYIKENTKNE-SVHIPVILSQTGMTELVYNDFHIGENADVTIVAGCGIHNEGSEKAEHDG 111
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ NA++KY V+ Y + N T G ++ TQ+ +
Sbjct: 112 IHTFYIGKNAKVKY--VEKHYGEGDGTGERVLNPETIVNIEDGGYMEMETTQI--KGVDS 167
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
K + + + + +++G Q ++ ++ +N+++ ++S+ ++ S +
Sbjct: 168 TKRTTKAILEDNATLVIKEKIMTHGSQFAETEFEVDLNGENSSTNVISRSVAKDNSKQVF 227
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
K+ G T+CD++++ N C IP I + N +L HEA KI+ E L
Sbjct: 228 LSKI---NGNNKCAGHTECDAIIMDNAC-VKAIPEITANNIDASLIHEAAIGKIAGEQLI 283
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
+ G+ E+ A IV+GF++
Sbjct: 284 KLMTLGLTEKEAEEQIVSGFLK 305
>gi|260588531|ref|ZP_05854444.1| ABC transporter system permease [Blautia hansenii DSM 20583]
gi|260541006|gb|EEX21575.1| ABC transporter system permease [Blautia hansenii DSM 20583]
Length = 305
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDN 269
+ ++E G + + V+ + GC ++ H + N
Sbjct: 61 NESIHIPVVLSEAGLKETVYNDFYIGDDCDVTIVAGCGIHCGTDDSSEHDGIHSFFIGKN 120
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+++KY V+ Y I N T G S + + + + +
Sbjct: 121 SKVKY--VEKHYGSGDGKGQRIMNPETIVEV--GENSYMEMDTAQIKGVDSTIRKTTVKL 176
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + + +++G Q+ +S + +N+ + I+S+ ++ S ++ V G
Sbjct: 177 DKNASIKVMERLMTHGEQRAESHFVVDLNGENSGANIISRSVAKDNSYQLFQS---VLNG 233
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
T+CD++++GN +IP I + NS L HEA KI+ E + + G+ E
Sbjct: 234 NEMCSGHTECDAIIVGN-AKISSIPEITANNSDAALIHEAAIGKIAGEQIIKLMTLGLTE 292
Query: 450 EAAIALIVNGFVR 462
E A I++GF++
Sbjct: 293 EEAEEQIISGFLK 305
>gi|294866448|ref|XP_002764721.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239864411|gb|EEQ97438.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 378
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 98/267 (36%), Gaps = 29/267 (10%)
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
F ++ +EG+ ++ E A ++ A + ++ Q +
Sbjct: 132 ATFPNMSVVVEEGASLTLRESVDA---------GGRTQVYLQAGARLVHTLHQTRGDCST 182
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI-TWKYPSCLLRGEQSCGEFYSIAI-S 343
+ SK + T+L + + G + +S+ + +
Sbjct: 183 V-------------VRQDGGSKYNQTRLVVPDSDGATHTTDIEVNGPDCVSDVHSVHVVA 229
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAG-FSNNTYRGKVSVHRGAAHSRNFTQCDSL 402
+S + L+ T +R + + G S ++++ V++ A + +C +L
Sbjct: 230 REGVHTESDSNCNFLSTGTKARQTHRAVLCGPKSRSSWKSTFMVNKIAQQTDANQECKAL 289
Query: 403 LIGNNCGAHTIPYIESKNSSCNLEHEATTS-KISDEHLFYCLQRGIPEEAAIALIVNGFV 461
L+ P + + + H A S I + LFY RG+P A L VNGF+
Sbjct: 290 LLDRTARMTARPELRIQADDVKVTHGAALSTTIDPKQLFYLTSRGVPRSRARWLYVNGFL 349
Query: 462 REVLQKLPMEFAVEAQKLIDISLEGSV 488
+ L ++ +E ++ + +E ++
Sbjct: 350 EDTLTRVDD---LEDREWLREKVEKAI 373
>gi|150019959|ref|YP_001305313.1| SufBD protein [Thermosipho melanesiensis BI429]
gi|149792480|gb|ABR29928.1| SufBD protein [Thermosipho melanesiensis BI429]
Length = 372
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 11/235 (4%)
Query: 255 NQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
N + DNA++ + + N SK+ +
Sbjct: 149 NDFSNNTLRFELGDNAKLNLYNIH----VTKDSSFSVDN----VFIWTKNNSKVVVKDVY 200
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
GS Y + + + + + D + + I ++G
Sbjct: 201 IGSGKIAGYLGVKMGNKNANVQIKPYFLGKNSAIFDLLYLLRFVGIENKGSIRAEGALMD 260
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKI 434
+ +RG + + RGA +S +L+ N IP + + H A+++ +
Sbjct: 261 SAKVVFRGILDLRRGAKNSEAEEFEKCILLSKNSKMEAIPSLLVDENEVVASHAASSAPL 320
Query: 435 SDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ +FY + RG E+ A I+NG ++++L + + VE LI +LE G
Sbjct: 321 DENSVFYLMSRGFSEKEAKRYILNGIFETLVEELTI-YGVEG--LIKDALEEYTG 372
>gi|300124026|emb|CBK25297.2| unnamed protein product [Blastocystis hominis]
Length = 432
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 66/401 (16%), Positives = 139/401 (34%), Gaps = 14/401 (3%)
Query: 90 AAPKSIVGPQSLDDVDPELLRT--YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVV-- 145
A K P SL D ++ +E+ + + D ++ V
Sbjct: 30 AEEKEKEKPTSLLDTVDQMEDDAFFEETNYALPSNVRMEEEGLKVDTTDEIYGGRYVQRD 89
Query: 146 -TTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSA---VFTDGSF 201
T E + G+ + + A+ ++ +KY + N + G
Sbjct: 90 QTIETVESFEDGIEVITLGNALKKYDWFREKYFWKALSRDKNDMTRAVAQNDETNPTGYV 149
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ G R ++ + Q+ ++IA GS ++ C+ + + V
Sbjct: 150 IIAHPGARSVNPVNGQLIMESSHM-QYVHNILIAMPGSQLTVASFCSYHCPSQQASDSIV 208
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+ V + + N + S
Sbjct: 209 LRGVQRAIVFLDGTVRSNSLISIHSWCHAFAVWPVSAAIVDDNGVFYSNYVCLEPVQRVK 268
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
P LRG+ + F S+ ++ +D G+ L + + S +++ IS G +
Sbjct: 269 MCPVANLRGKNAVANFSSVLLAKEGTDLDIGSCALLNGEGSRSESITRTISKGG--TVF- 325
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGN-NCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
+ +H A +++ +C L+I ++IP I + L HEA KI+ + +
Sbjct: 326 ARADIHGNAPNTKGHIECQGLVITEGKGMIYSIPQISGGFGT-ELSHEAAIGKIAKDKIE 384
Query: 441 YCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
Y + R + EE A+++I+ GF+ ++ +P + +I+
Sbjct: 385 YLMTRRMTEETAVSVIIRGFLNVKVKGIPRSVQEQMDAVIE 425
>gi|282855464|ref|ZP_06264784.1| SufBD protein [Pyramidobacter piscolens W5455]
gi|282586690|gb|EFB91938.1| SufBD protein [Pyramidobacter piscolens W5455]
Length = 308
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/278 (18%), Positives = 102/278 (36%), Gaps = 9/278 (3%)
Query: 186 NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLE 245
N S+ + ++ G + E S V +
Sbjct: 39 NTAHIEISSKADGTGIDIRIAPGTKNESVHIPVVVSAAGLKETVYNDFYVGEDSDVLIVA 98
Query: 246 GC-TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
GC ++ H V NA ++Y V+ Y S I N T+ G
Sbjct: 99 GCGIDNCGRQDAEHDGVHRFYVGKNARVRY--VEKHYGSGSGEGKRILNPQTEVYMEDGS 156
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
++ Q+ + + + + + +++G QQ SG ++ +++
Sbjct: 157 SMEMEMVQI--KGVDSTQRMTIAELKKDARLVVRERLMTHGDQQATSGYRVSLNGDGSSA 214
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+VS+ ++ S + + A S T+CDS+++ + +P +E+ N
Sbjct: 215 DVVSRSVARDASFQKFDAC--IVGNAQCS-GHTECDSIIM-DKGKILAVPSLEANNVDAQ 270
Query: 425 LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
L HEA KI+ + + + G+ E+ A I+NGF++
Sbjct: 271 LVHEAAIGKIAGDQIVKLMTLGLSEQQAEEQIINGFLK 308
>gi|257414184|ref|ZP_04745508.2| ABC transporter system permease involved in Fe-S cluster assembly
[Roseburia intestinalis L1-82]
gi|257200944|gb|EEU99228.1| ABC transporter system permease involved in Fe-S cluster assembly
[Roseburia intestinalis L1-82]
Length = 315
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 9/258 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVEL 264
K + ++E G + EG+ V+ + GC + H V
Sbjct: 66 KPGTVNESVHIPVLLSESGMQECVYNDFYIGEGADVTIVAGCGIHNCGVDTSKHDGVHTF 125
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
NA+++Y ++ Y I N T G ++ TQ++ +
Sbjct: 126 YLEKNAKVRY--IERHYGEGDGNGENIMNPQTIVHLKEGAHMEMETTQIKGIDSTVRV-T 182
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
L E + E + +++G Q + + N++ +VS+ ++ G S +
Sbjct: 183 RGDL-AENASLEIHEKIMTHGKQYAKTDFHVDINGDNSSVNLVSRSVAKGESKQEF---F 238
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
SV G A ++CD++++ N C + P + + N NL HEA KI+ E L +
Sbjct: 239 SVMNGNAACAGHSECDAIIMDNACVTAS-PQLTANNIDANLIHEAAIGKIAGEQLIKLMT 297
Query: 445 RGIPEEAAIALIVNGFVR 462
G+ E+ A I+NGF++
Sbjct: 298 LGLTEKEAEEQIINGFLK 315
>gi|303232828|ref|ZP_07319512.1| SufB/sufD domain protein [Atopobium vaginae PB189-T1-4]
gi|302481018|gb|EFL44094.1| SufB/sufD domain protein [Atopobium vaginae PB189-T1-4]
Length = 408
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 91/286 (31%), Gaps = 12/286 (4%)
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+V D F +PKG + + + LI + V + T+
Sbjct: 98 WIDSVAPDSHFYEVPKGQHAEKPI-VLNVNADNNEMKDSGILIREGAEACVVLVSHATSN 156
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ + A V ++ +A + + + + G R+ +
Sbjct: 157 KESSS---ANVARIIVERDATLHLVEI--------VAMSDTHQHLQGTGLQLDDRAHVDV 205
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
Q G ++G + + G +++D +NT ++S G
Sbjct: 206 HQYALGGKQVAFGFEANMQGASCRLDLMLRYLVRGDERLDINHIARQRGRNTRCTMLSNG 265
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
I ++ T R + + GA S+ L+ ++ T+P I H A+
Sbjct: 266 ILYDRAHKTLRETIDLVHGAKGSKGNEAETVLVASDDVRNETLPVILCDEDDVMGNHGAS 325
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEA 476
I E L Y RG+ EE A L + P + EA
Sbjct: 326 IGSIGPEQLGYLSDRGLTEEEANELFERAIFDDAAIHAPDAASREA 371
>gi|225405565|ref|ZP_03760754.1| hypothetical protein CLOSTASPAR_04786 [Clostridium asparagiforme
DSM 15981]
gi|225042914|gb|EEG53160.1| hypothetical protein CLOSTASPAR_04786 [Clostridium asparagiforme
DSM 15981]
Length = 305
Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 94/250 (37%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ ++E G E V + GC D++ H + NA++
Sbjct: 64 VHIPVVVSESGLKDMVYNDFYIGEDCDVVIVAGCGIHNCGDQDAEHDGIHRFYVGKNAKV 123
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y I N +T S + ++ + +
Sbjct: 124 KY--VEKHYGEGDGRGKRILNPLT--EVHMEENSYVEMEMVQIKGVDSTDRVTNAELAAG 179
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q S + + ++ +VS+ ++ S T+ ++ A
Sbjct: 180 AKLIVRERLLTHGTQSAVSTYVVDLNGDDASTDLVSRSVAKDQSVQTFN--SKINGNA-K 236
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
++CD++++ + +P + + N L HEA KI+ E + + G+ EE A
Sbjct: 237 CSGHSECDAIIMDD-AKIIAVPGLTANNIDAALIHEAAIGKIAGEQIVKLMTLGLTEEEA 295
Query: 453 IALIVNGFVR 462
A IVNGF++
Sbjct: 296 EAQIVNGFLK 305
>gi|291518202|emb|CBK73423.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Butyrivibrio fibrisolvens 16/4]
Length = 307
Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ ++E G E + V+ + GC D++ H + NA++
Sbjct: 66 VHIPVVLSESGLKDMVYNDFYIGEDADVTIVAGCGIHNCGDQDSQHDGIHTFHVGKNAKV 125
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y I N VT+ G ++ Q++ + L+ E
Sbjct: 126 KY--VEKHYGEGDGKGARILNPVTEVYQEEGSYVEMEMVQIKGVDSTVRTNL-AELK-EG 181
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ + +++G Q S K+ + +++ +VS+ ++ S + G
Sbjct: 182 ATLLIHEALMTHGSQTATSDYKVALNGEGSSADVVSRSVAKDDSEQIF---EVSIEGNTA 238
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
CD++++GN IP +++KN L HEA KI+ + L + G+ EE A
Sbjct: 239 CNGHAACDAIIMGN-AHVVAIPKLDAKNVDAALIHEAAIGKIAGDQLIKLMSLGLTEEEA 297
Query: 453 IALIVNGFVR 462
IV GF+R
Sbjct: 298 EEQIVAGFLR 307
>gi|227523797|ref|ZP_03953846.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus hilgardii ATCC 8290]
gi|227089112|gb|EEI24424.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus hilgardii ATCC 8290]
Length = 312
Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats.
Identities = 65/316 (20%), Positives = 123/316 (38%), Gaps = 38/316 (12%)
Query: 49 NEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPEL 108
NEP+W+ R A+ + + P + ++ Y + D + Q DV L
Sbjct: 21 NEPEWLTNLRDEAWEQVDKLTLPVFDKVDYHSWPLLDF-------TETEEQPTGDVTSLL 73
Query: 109 LRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICE 168
T + + + +V ++LK G+I + AI +
Sbjct: 74 DPTENYHFVSVGK--------------------ETVKNDLSDDLKSKGIILTDMKTAIRD 113
Query: 169 HPDLV-KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
+ +L+ K V +N A+N+A+ G+F+Y+P V ++ + +
Sbjct: 114 YSELLSKYLFQKAVKYKENRLTAVNAALMNGGTFLYVPDNVDIKEPINLMTVQDSRFKEN 173
Query: 228 F-ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
F TLI+A S+ S L+ + N H V E++A D++ +K+S +
Sbjct: 174 FVNHTLIVAGVNSHFSVLQRVSTIGEQTNPAHVTV-EIIAEDSSYVKFSALDTLAK---- 228
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
Y + +RG ++I WT T L G+ S E ++A+S G
Sbjct: 229 ---NTYAYYNRRG-YLESSARIDWTMGVLNDGHTVADFDSDLMGDGSHTEMQTVALSTGK 284
Query: 347 QQIDSGTKMLHLAKNT 362
Q T++ + +++
Sbjct: 285 QVQGLDTQVTNYGRHS 300
>gi|296132444|ref|YP_003639691.1| SufBD protein [Thermincola sp. JR]
gi|296031022|gb|ADG81790.1| SufBD protein [Thermincola potens JR]
Length = 305
Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 99/250 (39%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ I +G EG+ V + GC + H + + + A +
Sbjct: 64 VHIPVIITSEGLEDVVYNTFDIGEGADVVVVAGCGIHNPGESKAEHNGIHDFIIRKGARM 123
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+Y ++ Y I N VT G +++ Q+ G T + L +
Sbjct: 124 RY--IEKHYGEGEGKGEKILNPVTIIEIEEGGYAELELVQIR-GVDSTRRETKARLHKD- 179
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q +S + + ++ +++I+S+ ++ S + +V G
Sbjct: 180 AHLLVTERMLTHGQQFAESNILVELIGQDASTQIISRSVAQDNSRQIFYPRVV---GFNR 236
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
R QCDS+++ + ++P I + + L HEA KI+ E L + G+ E A
Sbjct: 237 CRAHVQCDSIIM-HQAHVRSVPEIAANHPDAQLVHEAAIGKIAGEQLIKLMSLGLTEAEA 295
Query: 453 IALIVNGFVR 462
I+ GF++
Sbjct: 296 EETILKGFLK 305
>gi|300856937|ref|YP_003781921.1| hypothetical protein CLJU_c37930 [Clostridium ljungdahlii DSM
13528]
gi|300437052|gb|ADK16819.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 306
Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ + ++G EGS V + GC D+ H V E A I
Sbjct: 65 VHIPVILTQEGLNDVVYNTFEIGEGSDVLIVAGCGIHNPGDKKSQHDGVHEFFVRKGARI 124
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ + S + N T G +++ Q++ G + T + L +
Sbjct: 125 KY--VERHFGEGSGNGERVLNPKTIIEVEEGGYAELELVQIK-GVSSTKRDTEIKLH-KN 180
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ ++ Q +S + + K++++RI+S+ ++ S + + G
Sbjct: 181 ARAVVSERLLTYKNQDAESKINVEMVGKDSSARIISRSVARDESKQLFHLNM---SGYER 237
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
R QCDS+++ + +IP I + +S L HEA KI+ + L + G+ E+ A
Sbjct: 238 CRGHIQCDSIIM-DKATVQSIPKISAFHSDSQLIHEAAIGKIASDQLIKLMSLGLSEKEA 296
Query: 453 IALIVNGFVR 462
I+ GF++
Sbjct: 297 EDTILKGFLK 306
>gi|291534556|emb|CBL07668.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Roseburia intestinalis M50/1]
gi|291539861|emb|CBL12972.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Roseburia intestinalis XB6B4]
Length = 315
Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 9/258 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVEL 264
K + ++E G + EG+ V+ + GC + H V
Sbjct: 66 KPGTVNESVHIPVLLSESGMQECVYNDFYIGEGADVTIVAGCGIHNCGVDTSKHDGVHTF 125
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
NA+++Y ++ Y I N T G ++ TQ+ +
Sbjct: 126 YLEKNAKVRY--IERHYGEGDGNGENIMNPQTIVHLKEGAHMEMETTQI--KGIDSTVRV 181
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ E + E + +++G Q + + N++ +VS+ ++ G S +
Sbjct: 182 TKGDLAENASLEIHEKIMTHGKQYAKTDFHVDINGDNSSVNLVSRSVAKGESKQEF---F 238
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
SV G A ++CD++++ N C + P + + N NL HEA KI+ E L +
Sbjct: 239 SVMNGNAACAGHSECDAIIMDNACVTAS-PQLTANNIDANLIHEAAIGKIAGEQLIKLMT 297
Query: 445 RGIPEEAAIALIVNGFVR 462
G+ E+ A I+NGF++
Sbjct: 298 LGLTEKEAEEQIINGFLK 315
>gi|256828958|ref|YP_003157686.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
gi|256578134|gb|ACU89270.1| SufBD protein [Desulfomicrobium baculatum DSM 4028]
Length = 306
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 9/258 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVEL 264
K + +++ G I EGS V+ + GC E++ H+ + E
Sbjct: 57 KPGTVNESVHIPVILSQAGLHDTVYNTFIVGEGSDVTIIAGCGIHCGGKESEGHSGIHEF 116
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+A++KY V+ I N TK + ++ TQ G K
Sbjct: 117 QIKADAKVKY--VEKHIAIGDGTGRRILNPTTKVFMAENAQMEMELTQ--LGGVDEAKRF 172
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ G S +++G Q +S ++ + ++ + IVS+ + G S + +
Sbjct: 173 NEAHIGAGSVLLITERVMTDGDQVAESRNEIELVGTDSKTNIVSRSVIKGNSTQDFYVNL 232
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
+ S +CD++++ N TIP + + + + HEA+ KI+++ L +
Sbjct: 233 TALA---KSYGHIECDAIIMDNGS-NQTIPALRALHPDAEMTHEASIGKIANDQLMKLMT 288
Query: 445 RGIPEEAAIALIVNGFVR 462
G+ +AA+ I+ GF+R
Sbjct: 289 LGLDYDAAVNRIIQGFLR 306
>gi|300855866|ref|YP_003780850.1| putative FeS cluster assembly protein [Clostridium ljungdahlii DSM
13528]
gi|300435981|gb|ADK15748.1| putative FeS cluster assembly protein (SUF system) [Clostridium
ljungdahlii DSM 13528]
Length = 306
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ + ++G EGS V + GC ++ H V E A I
Sbjct: 65 VHIPVILTQEGLNDVVYNTFEIGEGSDVLIVAGCGIHNPGEKKSQHDGVHEFFVRKGARI 124
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ + S I N T G +++ Q++ G + T + L +
Sbjct: 125 KY--VERHFGEGSGNGERILNPKTIIEVEEGGFAELELVQIK-GVSSTKRDTEIKLH-KN 180
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ ++ Q +S + + +++++RI+S+ ++ S + + G
Sbjct: 181 ARAVVSERLLTYKNQDAESKINVEMVGRDSSARIISRSVARDESKQLFHLNM---SGYER 237
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
R QCDS+++ +IP I + +S L HEA KI+ + L + G+ E+ A
Sbjct: 238 CRGHIQCDSIIMDE-ATVQSIPKISAFHSDSQLIHEAAIGKIASDQLIKLMSLGLSEKEA 296
Query: 453 IALIVNGFVR 462
I+ GF++
Sbjct: 297 EDTILKGFLK 306
>gi|328955723|ref|YP_004373056.1| SufBD protein [Coriobacterium glomerans PW2]
gi|328456047|gb|AEB07241.1| SufBD protein [Coriobacterium glomerans PW2]
Length = 403
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 8/203 (3%)
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
+ A +++ + VQ + + G +++S G+ ++
Sbjct: 181 RVFAGARSQVSITCVQTLDD--------SWVALDDTGLFLDEDARVSVHHTVLGAGRSYT 232
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
+ L G+ S + + G Q+ D +++ + T S + + G+ AG S T RG
Sbjct: 233 GLAGDLLGDLSNISVATDYLGTGEQRRDFNYELIQRGEKTVSELAANGVLAGQSAKTMRG 292
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ + G SR + LL T+P I H AT I DE LFY
Sbjct: 293 TIELAHGCKGSRGSERETVLLADERVRNKTVPVILCDEDDVFGNHGATIGHIRDEQLFYL 352
Query: 443 LQRGIPEEAAIALIVNGFVREVL 465
RGI AA L + + + +
Sbjct: 353 ATRGISPTAAEDLFIRAKLEDAV 375
>gi|313905476|ref|ZP_07838840.1| SufBD protein [Eubacterium cellulosolvens 6]
gi|313469660|gb|EFR64998.1| SufBD protein [Eubacterium cellulosolvens 6]
Length = 363
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 99/279 (35%), Gaps = 10/279 (3%)
Query: 193 SAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR 252
+A + +P G P L ++ + G R +IA++ S ++ + +
Sbjct: 72 AASGIGTTVYTVPAGKLIPDTLRLKYKFAKDGD-TLNRVDLIAEKNSELTVV-MDYTSEE 129
Query: 253 DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQ 312
++ +NA +K + G + V G ++I Q
Sbjct: 130 GAAGSACVQTKVDLKENAVLKLVQI--------VRVGDAFTIVNDLGGKVDDSARIELIQ 181
Query: 313 LETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGIS 372
L ++ L G +S + +G + +D H + T S I+ G+
Sbjct: 182 LVLDGGNVYQGYQIDLEGFKSSLKNNLAYRVSGSRHLDINNFANHTGRKTESEIIVNGVL 241
Query: 373 AGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTS 432
++ R + + +GA + D LL+ TIP I H AT
Sbjct: 242 RDSASKILRATIDLKKGAKGAVGNEAEDVLLMDEGVHNQTIPLILCTEEDVVGNHGATIG 301
Query: 433 KISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
++ + +FY RG+ +E ++ + ++ +P +
Sbjct: 302 RLDENLMFYMESRGMDKETIYEMMAKARIDATIRLIPDD 340
>gi|222139536|gb|ACM45785.1| chloroplast ABC transporter protein [Cucumis sativus]
Length = 76
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
PYI+ KN + +EHEA+TSKI ++ LFY QRGI E A+A +++GF R+V +LP EF
Sbjct: 1 PYIQVKNPTARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFG 60
Query: 474 VEAQKLIDISLEGSVG 489
E +L+ + LEGSVG
Sbjct: 61 AEVNQLMSLKLEGSVG 76
>gi|257792015|ref|YP_003182621.1| SufBD protein [Eggerthella lenta DSM 2243]
gi|257475912|gb|ACV56232.1| SufBD protein [Eggerthella lenta DSM 2243]
Length = 481
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 68/201 (33%), Gaps = 8/201 (3%)
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
+ A +A + + Q G + + G R+ + G+ +
Sbjct: 259 RVFAGADARVDVAVTQTLDDG--------WIALDDAGIVLDERALVQVRHTVLGAGRAYT 310
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
LRG+ + + + + + QQ D + T + + G+ AG S T RG
Sbjct: 311 GLDADLRGDDARLDIDTRYLGHASQQRDFNYVAHQRGRRTVCNLDANGVLAGESEKTLRG 370
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ + G S Q LL T+P I H AT + E LFY
Sbjct: 371 TIELVHGCKGSVGSEQETVLLADERVANRTVPVILCDEDDVAGNHGATIGHVRPEQLFYL 430
Query: 443 LQRGIPEEAAIALIVNGFVRE 463
RGI + A L + E
Sbjct: 431 ASRGISPDDAERLFITASFEE 451
>gi|299144225|ref|ZP_07037305.1| iron-regulated ABC-type transporter membrane component
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518710|gb|EFI42449.1| iron-regulated ABC-type transporter membrane component
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 348
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 102/270 (37%), Gaps = 9/270 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELV 265
+ + + K F+ +IA+E S ++ + + + +++ ++
Sbjct: 75 SSKDAEINEIVDLKQDSKNNILFDTHDLIAEENSKLNLILNYNSISNSDKYR-NSIIRIL 133
Query: 266 ALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPS 325
A +N+++ +QN + S ++ Q E GS +
Sbjct: 134 AKENSQVNLYVIQNGDEKSFSLES--------IFVKTEKNSSVNLCQFELGSKELYTNFQ 185
Query: 326 CLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVS 385
L G +S SI +I+ +LH + T S +V G S ++ +
Sbjct: 186 GNLIGNESNLNIDSIYFGYDDNKINMLYDILHYGEATKSEVVVNGALKDDSYKNFKSTLD 245
Query: 386 VHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQR 445
G++ + + +L+ ++ A ++P + + + H A+ KI + LFY + R
Sbjct: 246 FKEGSSFAVGSEEEYVVLMDDSVTALSVPILLAHEDNVEGNHAASAGKIDQQLLFYIMSR 305
Query: 446 GIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
G + A +LI+ + KL E E
Sbjct: 306 GFNQVEAESLIIESKFSRAINKLENEELKE 335
>gi|126701235|ref|YP_001090132.1| hypothetical protein CD3607 [Clostridium difficile 630]
gi|254977237|ref|ZP_05273709.1| hypothetical protein CdifQC_18085 [Clostridium difficile QCD-66c26]
gi|255094566|ref|ZP_05324044.1| hypothetical protein CdifC_18201 [Clostridium difficile CIP 107932]
gi|255102825|ref|ZP_05331802.1| hypothetical protein CdifQCD-6_18581 [Clostridium difficile
QCD-63q42]
gi|255308644|ref|ZP_05352815.1| hypothetical protein CdifA_18781 [Clostridium difficile ATCC 43255]
gi|255316321|ref|ZP_05357904.1| hypothetical protein CdifQCD-7_18284 [Clostridium difficile
QCD-76w55]
gi|255518981|ref|ZP_05386657.1| hypothetical protein CdifQCD-_17818 [Clostridium difficile
QCD-97b34]
gi|255652162|ref|ZP_05399064.1| hypothetical protein CdifQCD_18390 [Clostridium difficile
QCD-37x79]
gi|260685129|ref|YP_003216414.1| hypothetical protein CD196_3400 [Clostridium difficile CD196]
gi|260688787|ref|YP_003219921.1| hypothetical protein CDR20291_3446 [Clostridium difficile R20291]
gi|306521887|ref|ZP_07408234.1| hypothetical protein CdifQ_20806 [Clostridium difficile QCD-32g58]
gi|115252672|emb|CAJ70515.1| putative iron-sulfur assembly protein [Clostridium difficile]
gi|260211292|emb|CBA66864.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214804|emb|CBE07540.1| conserved hypothetical protein [Clostridium difficile R20291]
Length = 305
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ + E G E + V + GC ++ H + A +
Sbjct: 64 VHIPVIVTEAGVQDMVYNDFEIGENADVVIIAGCGIHNCGCDDSEHNGIHRFFLRKGARL 123
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y I N VT ++ Q++ G T + L G+
Sbjct: 124 KY--VEKHYGEGDGEGKRILNPVTIVNMDEDSYCEMETIQIK-GVDSTKREMDANL-GKG 179
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ + +++G Q +S K++ +N+++++VS+ + S + V G +
Sbjct: 180 AKIVVFEKLLTHGNQVAESNMKVILEGENSSAQVVSRTVGQDNSKQKFNPCVI---GDSL 236
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
QCDS+++GN IP I + + L HEA KI+ + + + G+ EE A
Sbjct: 237 CSAHVQCDSIIMGN-SQISAIPEIAANHPDALLVHEAAIGKIAGDQILKMMTLGLTEEEA 295
Query: 453 IALIVNGFVR 462
I+N F++
Sbjct: 296 EQQILNCFLK 305
>gi|261366191|ref|ZP_05979074.1| ABC transporter system permease [Subdoligranulum variabile DSM
15176]
gi|282572007|gb|EFB77542.1| ABC transporter system permease [Subdoligranulum variabile DSM
15176]
Length = 305
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 100/262 (38%), Gaps = 10/262 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE-NQLHAA 260
+YI + + +++ G EG+ V+ + GC N H
Sbjct: 53 IYIRPFTKNE-SVHIPVILSQTGLKDLVYNDFHIGEGADVTIIAGCGIHNCGGGNAEHDG 111
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ NA+++Y V+ Y I N T G ++ TQ+
Sbjct: 112 IHTFWLAKNAKLRY--VEKHYGEGDGRGKQIMNPTTIVHLAEGAEMEMETTQIAGVDDTI 169
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
K L E + ++ G Q + + + ++ IVS+ ++ S +
Sbjct: 170 RK-TGGDL-AEGASLVVKEKIMTTGDQHAVTDFNVDLNGEGCSANIVSRSVAKDESKQEF 227
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
++ A + ++CD++++ ++ P + + + +L HEA KI+ E L
Sbjct: 228 --ISHINGNCACA-GHSECDAIIM-DHASVIASPALTANSVDASLIHEAAIGKIAGEQLI 283
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
+ G+ E+ A IVNGF++
Sbjct: 284 KLMTLGLTEKEAEDQIVNGFLK 305
>gi|164688263|ref|ZP_02212291.1| hypothetical protein CLOBAR_01908 [Clostridium bartlettii DSM
16795]
gi|164602676|gb|EDQ96141.1| hypothetical protein CLOBAR_01908 [Clostridium bartlettii DSM
16795]
Length = 306
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 9/252 (3%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDEN-QLHAAVVELVALDNA 270
++ I E G EG+ V + GC + H + A
Sbjct: 63 EKVHIPVVITETGVNDLVYNDFFIGEGAEVDIVAGCGIHNCGSSASEHDGIHTFYISKGA 122
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++ Y V+ Y I N T G ++ TQ+E ++ L G
Sbjct: 123 KVTY--VEKHYGEGEGTGDRILNPTTIVHMEEGSYCEMEMTQIEGVTSTVR-ETEANL-G 178
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ + +++ Q S KN+ +IVS+ ++ S ++ + G
Sbjct: 179 KDAKLVVTEKLMTHDKQHATSNITANLNGKNSILQIVSRSVAKNDSTQSFH---PIAVGN 235
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
R QCDS+++ +N +IP I++ ++ + HEA +I++E L G+ EE
Sbjct: 236 EKCRAHIQCDSIIM-DNAKVASIPEIQANHTDAAIIHEAAIGRINNEQLLKLETFGLDEE 294
Query: 451 AAIALIVNGFVR 462
A A+IV F+
Sbjct: 295 QAEAVIVEAFLS 306
>gi|309775738|ref|ZP_07670734.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
3_1_53]
gi|308916501|gb|EFP62245.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
3_1_53]
Length = 261
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 64/186 (34%), Gaps = 5/186 (2%)
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ ++ E + T + L E + S I+ ++ H +T
Sbjct: 78 KDAALTLALCELNAGDTRAEVALELLEEGASAMLRSACIAKSRKEFQMQCT--HHCPHTE 135
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+ + + ++ + RGA S + + L + + +P + +
Sbjct: 136 GFMENYAVVEDGAHYRMEATGKIIRGAYESNSHQKTRVLTMSEQHDSEVVPVLLIDENDV 195
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
H T + + L+Y RG+ + A+ L+ G++ + + E + +
Sbjct: 196 KASHATTLGQPDENQLYYLQTRGLSRKQALGLLTVGYIMPITELFEQEA---IRNALKDE 252
Query: 484 LEGSVG 489
+E VG
Sbjct: 253 IEMKVG 258
>gi|325262947|ref|ZP_08129683.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium sp. D5]
gi|324032041|gb|EGB93320.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium sp. D5]
Length = 310
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 15/255 (5%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNA 270
++ ++E G ++G+ V + GC ++ H + +A
Sbjct: 67 EQVHIPVVMSESGMKDVVYNDFYIEDGADVIIVAGCGIHNDGCSESRHDGIHAFHVGKDA 126
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
+KY V+N Y G + N VTK G S + + + + + +
Sbjct: 127 NVKY--VENHYAEGEGTGGKVLNPVTKIYV--GENSVFTLETTQIKGVDSTERETFVELS 182
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
E + +++ Q S + +N+++RI+S+ ++ G S + H A
Sbjct: 183 EGAKLFVTEKLMTHAEQTAISNMDVQLSGENSSARIISRSVAKGTSRQIF------HPRA 236
Query: 391 AH---SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
QCDS+++ + +IP I +K+ + HEA +I+DE L G+
Sbjct: 237 IGNNLCHAHVQCDSIIM-DQAEISSIPEINAKHVDAQIVHEAAIGRINDEQLIKLRTFGM 295
Query: 448 PEEAAIALIVNGFVR 462
EE A ++I+ F+
Sbjct: 296 SEEEAESVIIENFLN 310
>gi|225569488|ref|ZP_03778513.1| hypothetical protein CLOHYLEM_05574 [Clostridium hylemonae DSM
15053]
gi|225161696|gb|EEG74315.1| hypothetical protein CLOHYLEM_05574 [Clostridium hylemonae DSM
15053]
Length = 322
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 65/329 (19%), Positives = 124/329 (37%), Gaps = 19/329 (5%)
Query: 144 VVTTFKEELKKSGVIFMPISEAICEHPDLVK---------KYLSTVVPVGDNFYAALNSA 194
V T K+E K G I E + E D +Y T + GD+ + +
Sbjct: 3 VWTANKKEELKLGKQLDKIVEKVLEQIDGAGFRQKGAFNLRYNGTALCHGDSEHIKIKKK 62
Query: 195 VFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE 254
G +YI + ++ +N G +G+ V+ + GC
Sbjct: 63 TDRQGIDIYIDENTNGE-QVHIPVVVNATGMKDEVYNDFFVADGADVTIIAGCGIHNSGC 121
Query: 255 NQ-LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
N+ H + A ++Y + Y + N VTK + +
Sbjct: 122 NESRHDGIHTFHVGKGANVRYE--EKHYGEGEGTGARVLNPVTK--IILDKGAVFTLDTA 177
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
+ + + ++ GE + +++ Q S ++ + ++++IVS+ ++
Sbjct: 178 QIKGVDSTVRTTDVIMGEDAKLYVVEKLMTHDSQTAQSDMEVNMNGEGSSAQIVSRSVAK 237
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
G S T+ K G A QCDS+++ + +IP I +++ + HEA +
Sbjct: 238 GSSVQTFHPKAV---GNARCHAHIQCDSIIM-DKAEVCSIPEINARHLDAAIIHEAAIGR 293
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
I+DE L G+ EE A +I+ F+
Sbjct: 294 INDEQLIKLRTLGMTEEEAEGVIIENFLE 322
>gi|255657564|ref|ZP_05402973.1| hypothetical protein CdifQCD-2_18111 [Clostridium difficile
QCD-23m63]
gi|296452759|ref|ZP_06894449.1| ABC superfamily ATP binding cassette transporter permease protein
[Clostridium difficile NAP08]
gi|296879987|ref|ZP_06903957.1| ABC superfamily ATP binding cassette transporter system permease
[Clostridium difficile NAP07]
gi|296258449|gb|EFH05354.1| ABC superfamily ATP binding cassette transporter permease protein
[Clostridium difficile NAP08]
gi|296428964|gb|EFH14841.1| ABC superfamily ATP binding cassette transporter system permease
[Clostridium difficile NAP07]
Length = 305
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ + + G E + V + GC ++ H + A +
Sbjct: 64 VHIPVIVTDTGVQDMVYNDFEIGENADVVIIAGCGIHNCGCDDSEHNGIHRFFLRKGARL 123
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y I N VT ++ Q++ G T + L G+
Sbjct: 124 KY--VEKHYGEGDGKGKRILNPVTIVNMDEDSYCEMETIQIK-GVDSTKREMDANL-GKG 179
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ + +++G Q +S K++ +N+++++VS+ + S + V G +
Sbjct: 180 AKIVVFEKLLTHGNQVAESNMKVVLEGENSSAQVVSRTVGQDNSKQKFNPCVI---GDSL 236
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
QCDS+++GN IP I + + L HEA KI+ + + + G+ EE A
Sbjct: 237 CSAHVQCDSIIMGN-SQISAIPEIAANHPDALLVHEAAIGKIAGDQILKMMTLGLTEEEA 295
Query: 453 IALIVNGFVR 462
I+N F++
Sbjct: 296 EQQILNCFLK 305
>gi|323484379|ref|ZP_08089746.1| hypothetical protein HMPREF9474_01497 [Clostridium symbiosum
WAL-14163]
gi|323692391|ref|ZP_08106627.1| SufBD protein [Clostridium symbiosum WAL-14673]
gi|323402373|gb|EGA94704.1| hypothetical protein HMPREF9474_01497 [Clostridium symbiosum
WAL-14163]
gi|323503531|gb|EGB19357.1| SufBD protein [Clostridium symbiosum WAL-14673]
Length = 305
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 100/253 (39%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
+ +++ G + + + V+ + GC D H + N
Sbjct: 61 NESVHIPVVLSQSGMTEMVYNDFYIGDNADVTIIAGCGIHNGGDAASEHDGIHRFFIGRN 120
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A ++Y V+ Y I N T+ G ++ Q++ + K + L
Sbjct: 121 ARVRY--VEKHYGEGDGKGKRILNPTTEVTMEEGSSLEMETVQIKGVDSTIRKTVADLAA 178
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G +++G Q +S + ++ ++ ++S+ ++ S + +SV G
Sbjct: 179 GAGIV--IKERLLTHGNQDAESSIIVNLNGEDASANVMSRSVAKEDSRQKF---ISVING 233
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
+ T+CD+++IGN +P + + + L HEA KI+ E + + G+ E
Sbjct: 234 NSRCAGHTECDAIIIGN-AKIQAVPELTANDPDAALIHEAAIGKIAGEQIIKLMTLGLTE 292
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 293 AEAEEQIINGFLK 305
>gi|224367182|ref|YP_002601345.1| hypothetical protein HRM2_00580 [Desulfobacterium autotrophicum
HRM2]
gi|223689898|gb|ACN13181.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 306
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 108/266 (40%), Gaps = 10/266 (3%)
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQ 256
DG + I G + + +++ G I EGS V+ + GC D+++
Sbjct: 50 DGIVIEIKPGTKNE-SVHIPVILSQAGLHDVVYNTFIIGEGSDVTIVAGCGIHCGSDKSE 108
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
H+ + E ++NA + Y ++ I N T + TQL
Sbjct: 109 GHSGIHEFQVMNNARVTY--IEKHVAIGDGTGRRILNPTTNVVMHENAYVHMELTQLGGV 166
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
+ + G +S ++ Q +S ++ +++ + I+S+ + G S
Sbjct: 167 DEAKRINTATI--GPKSVLSVTERVMTEKNQFAESRNEVTLSGEDSKANIISRSVIKGHS 224
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
+ + + +CD++++ ++ TIP +++ + L HEA+ KI++
Sbjct: 225 SQDFYVNLIAKNRCFG---HIECDAIIM-DHGINQTIPALKALHPDAELTHEASIGKIAN 280
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVR 462
+ L + G+ + A+ I+ GF+R
Sbjct: 281 DQLMKLMSLGLNYDEAVDQIIQGFLR 306
>gi|320528268|ref|ZP_08029430.1| SufB/sufD domain protein [Solobacterium moorei F0204]
gi|320131182|gb|EFW23750.1| SufB/sufD domain protein [Solobacterium moorei F0204]
Length = 266
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 86/263 (32%), Gaps = 17/263 (6%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL--VALDNAEIKYSTVQNWYPGDS 285
F + I + +++ + + + + A +A++KY
Sbjct: 16 FSQFEIDTERDIELTFSADAGEYEVFVRIKNCGKLRIRTFAYADAQVKY----------L 65
Query: 286 QGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNG 345
+ F + + E + LR + G S ++
Sbjct: 66 FWNDNEHMFEIDETHEVLRNANVEVAHCEVNPYPVKRNTYMALREPGAYGHLVSSSLVAS 125
Query: 346 FQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIG 405
+ +++ A+ T + I + + + +GA+ S + + +
Sbjct: 126 D--KNYTQNVVNFAQRTLANIDNFAVVLKGGKLFIDAIGKIVKGASRSESHQKSRVMCFD 183
Query: 406 NNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
+ + IP + + H T +I E L+Y RG+ + +LI +G++ +
Sbjct: 184 DGQSSTVIPELLIDENDVQASHALTIGRIDREQLYYLQSRGLTQRQCTSLISSGYMYPIT 243
Query: 466 QKLPMEFAVEAQKLIDISLEGSV 488
Q L E Q+ + +E +
Sbjct: 244 QFLSDEA---LQQELRAEMEAKL 263
>gi|154485120|ref|ZP_02027568.1| hypothetical protein EUBVEN_02843 [Eubacterium ventriosum ATCC
27560]
gi|149734073|gb|EDM50192.1| hypothetical protein EUBVEN_02843 [Eubacterium ventriosum ATCC
27560]
Length = 305
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 101/262 (38%), Gaps = 10/262 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAA 260
+Y+ G + + I++ G + EG+ V + GC D+ H
Sbjct: 53 IYVKPGTKNE-SVHIPVVISKTGLEECVYNDFHIGEGADVLIVAGCGIHNSGDKLSRHDG 111
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ NA +KY V+ Y + N T G ++ ++ +
Sbjct: 112 IHTFYIGKNARVKY--VEKHYGKGDGNGENVMNPTTIVNIEEGGYMEME--TVQIKGIDS 167
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ + + +++G Q + ++ +++ ++S+ ++ S +
Sbjct: 168 TNRVTKGKLDKDAKIVITERIMTHGNQTATTRFEVDMDGDGSSANVISRSVARDNSKQIF 227
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
SV G A ++CD++++ +N IP I + + +L HEA KI+ E L
Sbjct: 228 ---YSVINGNARCNGHSECDAIIM-DNAKISAIPEITANDLDASLIHEAAIGKIAGEQLI 283
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
G+ E A IVNGF++
Sbjct: 284 KLQTLGLTEAEAEEQIVNGFLK 305
>gi|226325845|ref|ZP_03801363.1| hypothetical protein COPCOM_03658 [Coprococcus comes ATCC 27758]
gi|225205969|gb|EEG88323.1| hypothetical protein COPCOM_03658 [Coprococcus comes ATCC 27758]
Length = 308
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 15/255 (5%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNA 270
E+ ++ G EG+ V+ + GC N+ H + NA
Sbjct: 65 EEVHIPVVVDASGMTDVVYNDFYVAEGANVTIVAGCGIHNSGCNESRHDGIHTFHVEKNA 124
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++Y V+ Y + N VT G S + + + + +
Sbjct: 125 NVRY--VEKHYGEGEGTGARVLNPVT--EVYLGENSVFTLDTAQIKGVDSTVRENNVHLE 180
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
S +++G Q+ S + L + ++++IVS+ ++ G S + H A
Sbjct: 181 AGSKLYVIEKLMTHGKQEATSNMMVELLGEGSSAQIVSRSVAKGESRQVF------HPRA 234
Query: 391 AH---SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
QCDS+++ ++ +IP I +K+ + HEA +I+DE L G+
Sbjct: 235 VGKNRCHAHVQCDSIIM-DHAEVSSIPEINAKHVDAAIIHEAAIGRINDEQLIKLRTLGM 293
Query: 448 PEEAAIALIVNGFVR 462
EE A +I+ F+
Sbjct: 294 TEEEAEGVIIENFLN 308
>gi|297617723|ref|YP_003702882.1| SufBD protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145560|gb|ADI02317.1| SufBD protein [Syntrophothermus lipocalidus DSM 12680]
Length = 307
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 105/258 (40%), Gaps = 9/258 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVEL 264
K + + G I EGS V + GC ++ H + E+
Sbjct: 58 KPGTVNESVHIPVILTRSGFKDVVYNTFIIGEGSDVLVVAGCGIHNAGQDVSRHDGIHEV 117
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+ A ++Y V+ Y I N T G ++++ Q+
Sbjct: 118 IVKKGARMRY--VEKHYGEGRPEAQRILNPNTVITVEEGAQAEMELVQIRGVDHTRRVTT 175
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ + ++ + +++ Q+ +S ++ + ++++S+ ++ S +R +
Sbjct: 176 AYIY--DRGSLKIVEKLLTHRDQEAESTIEIHLVGTGGVAQVISRSVAQESSRQEFRAAL 233
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
G A S +CD++++ + ++P + ++N+ L HEA +I+ E L +
Sbjct: 234 I---GKARSNGHVECDAIIM-DRAQIRSVPELVAENAEAVLTHEAAIGRIAGEQLIKLMS 289
Query: 445 RGIPEEAAIALIVNGFVR 462
G+ E+ A+ I++GF+R
Sbjct: 290 LGLTEQEAVDAILSGFLR 307
>gi|76789426|ref|YP_328512.1| ABC transporter-associated protein [Chlamydia trachomatis A/HAR-13]
gi|76167956|gb|AAX50964.1| ABC transporter-associated protein [Chlamydia trachomatis A/HAR-13]
Length = 395
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 92/274 (33%), Gaps = 14/274 (5%)
Query: 197 TDGSFVYIPKGVRCPMEL---STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD 253
+G+ +YIP+G L Y E+ I+ G +
Sbjct: 119 EEGTVIYIPEGTELQTPLFVQHHYVCSEEENKKTVSAPYIVFVLGKGAAISIEMGMSALP 178
Query: 254 ENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
+N + AE+ T++ G + + V +RG C Q
Sbjct: 179 DNVYLLGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACA-------LIQD 230
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
W S L+GE + GE + G + M H + TTSR + I
Sbjct: 231 MRSMGKGWFRNSFFLKGETAHGESLVKVL--GGDFLGVHNTMHHDDRETTSRQNIRSILE 288
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 289 EGSF-SFEGGIYISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGS 347
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 348 LNAHLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|291549622|emb|CBL25884.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Ruminococcus torques L2-14]
Length = 305
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 94/231 (40%), Gaps = 8/231 (3%)
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
I ++ V + H + NA++KY V+ Y I
Sbjct: 83 FYIGNDCDVVIVAGCGIQNSGALDSQHDGIHRFFVGRNAKVKY--VEKHYGTGEGYGKRI 140
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
N VT + S + ++ + S + + + +++G Q+ S
Sbjct: 141 LNPVT--EVYQEEGSYVEMEMVQIKGVDSTIRTSKAVLSKGAKLVIKERLMTHGKQKATS 198
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
++ + + + ++S+ ++ +SN ++ + GA +CD++++ +
Sbjct: 199 IYEVELKGEFSNADVISRSVAKDYSNQSFEANII---GANICNGHAECDAIIM-DQARVL 254
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+IP +++++ L HEA KI+ E L + G+ E+ A IVNGF++
Sbjct: 255 SIPKLDARHMDAMLIHEAAIGKIAGEQLIKLMTLGLTEKEAEECIVNGFLK 305
>gi|238925332|ref|YP_002938849.1| hypothetical protein EUBREC_2987 [Eubacterium rectale ATCC 33656]
gi|238877008|gb|ACR76715.1| hypothetical protein EUBREC_2987 [Eubacterium rectale ATCC 33656]
gi|291524381|emb|CBK89968.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium rectale DSM 17629]
gi|291527604|emb|CBK93190.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium rectale M104/1]
Length = 308
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 11/251 (4%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEI 272
+ +++ G ++G+ V + GC N+ H + NA +
Sbjct: 67 VYIPVVLSKSGMTDLVYNDFYVEDGADVRIVAGCGIHNSGCNESRHDGIHTFHVGKNANV 126
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI-TWKYPSCLLRGE 331
+Y + Y + + N VT G S + + T + + L G+
Sbjct: 127 RYE--EKHYGEGNGTGARVLNPVTNIFV--GENSVFTLDTAQIKGVDSTVRETNVEL-GK 181
Query: 332 QSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAA 391
+ +++G Q+ +S ++ ++++++IVS+ + G S T+ G +
Sbjct: 182 DAKLYVTERLMTDGEQKAESNIEVQLNGEDSSAQIVSRSVGKGNSVQTFHPNAI---GNS 238
Query: 392 HSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEA 451
+ QCDS+++ ++ +IP I +KN + HEA +I+DE L G+ EE
Sbjct: 239 KCQAHIQCDSIIM-DHAEVGSIPEIRAKNIDAAIIHEAAIGRINDEQLLKLRTLGLTEEE 297
Query: 452 AIALIVNGFVR 462
A +I+ F+
Sbjct: 298 AEEVIIQNFLN 308
>gi|304440324|ref|ZP_07400213.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371076|gb|EFM24693.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 348
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 83/225 (36%), Gaps = 8/225 (3%)
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
I E + A + +++ +++ ++ +N++ +Q + + + +
Sbjct: 99 IVTEKGESQSIIIDYASKGHKDKFRNSIIRILGHENSKTNVFIIQREGEESTVLESILVH 158
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
+ I Q E GS+ L GE S E SI +ID
Sbjct: 159 --------AEEGANIFVNQYEVGSSKLISNYKANLIGEASHAEVNSIYFGYNDHEIDLIY 210
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++H K +TS I+ G + ++ + G+ S + +L+ + + ++
Sbjct: 211 NIIHKGKQSTSNIIINGALKDNARKVFKSNLDFLEGSTGSVGNEEEFCMLLDSTVKSISV 270
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
P + H A+ +I + LFY + RG A LI+
Sbjct: 271 PLLLCHEDDVLGNHAASAGRIDENILFYIMSRGFSMAEAEKLIIE 315
>gi|229815533|ref|ZP_04445860.1| hypothetical protein COLINT_02580 [Collinsella intestinalis DSM
13280]
gi|229808763|gb|EEP44538.1| hypothetical protein COLINT_02580 [Collinsella intestinalis DSM
13280]
Length = 420
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 91/261 (34%), Gaps = 10/261 (3%)
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+G I+A S S + + + + + A A + +
Sbjct: 153 IRVTTHEGEASGASIDIVAAPNSTFSIALSLDSAADAPAFM-GSTMRVFAGAGARVDITV 211
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
V G +++S + G T + LRG++S +
Sbjct: 212 Y--------LTASDAVTCVEDSGFVLDKDARVSVRHVVLGGGFTATGLAADLRGDRSRID 263
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
+ +++G QQ D + H + T S + + G+ G S RG + + GA +
Sbjct: 264 VDTSYLASGTQQRDFNYIIRHRGRKTVSNMDANGVLTGTSKKCLRGTIDLIHGAKGAEGN 323
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
+ LL T+P I H AT + + LFY RG+ +E AL
Sbjct: 324 ERETVLLASKGVDNKTVPNILCDEDDVAGNHGATIGHVRPDQLFYAACRGLSQEQTEALF 383
Query: 457 VNGFVREVLQKLPMEFAVEAQ 477
++ + + + P + AV A
Sbjct: 384 LSAKLEDAALQAPND-AVRAN 403
>gi|110005499|emb|CAK99821.1| hypothetical iron-sulfur cluster assembly protein n-terminal
truncated [Spiroplasma citri]
Length = 276
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 3/186 (1%)
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+++++ L ++ + + L+G++S ++Y ++S ++ HLA T
Sbjct: 93 EKAQVNTYHLNIVNSSISENVTFNLQGKRSAIKYYLASLSTHDYHKNAIIYAHHLAPTTE 152
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I + I+ S T + + + + S + L+ A + P + +
Sbjct: 153 SEIKTYSIAKDNSLQTVKCTSHIEKTMSKSEAHQELRLLVFDKTSKAISDPILLIDENDI 212
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
H + +FY RG+ A LI G+ + V+ + E E QK I
Sbjct: 213 KASHANAVGMLDPAQIFYLRTRGLTITQARKLICMGYFKNVIDAIEDE---ELQKNIIDE 269
Query: 484 LEGSVG 489
++ +G
Sbjct: 270 IDKEIG 275
>gi|255349077|ref|ZP_05381084.1| hypothetical protein Ctra70_03690 [Chlamydia trachomatis 70]
gi|255503615|ref|ZP_05382005.1| hypothetical protein Ctra7_03690 [Chlamydia trachomatis 70s]
gi|255507294|ref|ZP_05382933.1| hypothetical protein CtraD_03675 [Chlamydia trachomatis D(s)2923]
gi|289525730|emb|CBJ15211.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435301|gb|ADH17479.1| hypothetical protein E150_03650 [Chlamydia trachomatis E/150]
gi|296439019|gb|ADH21172.1| hypothetical protein E11023_03620 [Chlamydia trachomatis E/11023]
Length = 395
Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 94/276 (34%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G L T + + +G+ +S G
Sbjct: 119 EEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGM--SA 176
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ T++ G + + V +RG C
Sbjct: 177 LPDNVYLFGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACA-------LI 228
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q W S L+GE + GE + G + M H + TTSR + I
Sbjct: 229 QDMRSMGKGWFRNSFFLKGEAAHGESLVKVL--GGDFLGVHNTMHHDDRETTSRQNIRSI 286
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 287 LEEGSF-SFEGGIYISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATV 345
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 346 GSLNAHLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|160881140|ref|YP_001560108.1| SufBD protein [Clostridium phytofermentans ISDg]
gi|160429806|gb|ABX43369.1| SufBD protein [Clostridium phytofermentans ISDg]
Length = 305
Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 111/316 (35%), Gaps = 12/316 (3%)
Query: 148 FKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKG 207
E K+ + + E +L ++ + I K
Sbjct: 1 MDEIQKELLIQVADLHEVPQGAYNLRVNGQGAGRNTTEHIDIVTKT---DKPGIDIIVKP 57
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVA 266
+ +++ G + E S V+ + GC ++ H +
Sbjct: 58 GTKNESIHIPVVLSQSGLTELVYNDFFIGEDSDVTIVAGCGIHNGGSDKSEHDGIHSFFI 117
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
NA++KY V+ Y I N T G + ++ + +
Sbjct: 118 GKNAKVKY--VEKHYGSGDGSGERILNPQTIIHIDEG--GYMEMDTVQIKGVDSTIRTTQ 173
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
+++ +++G Q + ++ ++ + ++S+ ++ S+ + K+
Sbjct: 174 ATLEDKATLVIKEKIMTHGKQYAKTDFEVNLNGEDCGANVISRSVAKEDSHQIFLSKI-- 231
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
G T+CD++L+ + IP I + + +L HEA KI+ E + + G
Sbjct: 232 -NGNNKCYGHTECDAILMDRGSVS-AIPEITANHLEASLIHEAAIGKIAGEEITKLMTLG 289
Query: 447 IPEEAAIALIVNGFVR 462
+ E A A IVNGF++
Sbjct: 290 LTEAEAEAQIVNGFLK 305
>gi|255526846|ref|ZP_05393744.1| SufBD protein [Clostridium carboxidivorans P7]
gi|296187609|ref|ZP_06856003.1| SufB/sufD domain protein [Clostridium carboxidivorans P7]
gi|255509467|gb|EET85809.1| SufBD protein [Clostridium carboxidivorans P7]
gi|296047566|gb|EFG87006.1| SufB/sufD domain protein [Clostridium carboxidivorans P7]
Length = 306
Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 102/250 (40%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ I ++G EGS V + GC D H V E A I
Sbjct: 65 VHIPVIITKEGLNDVVYNTFEIGEGSDVLIVAGCGIHNPGDTKSQHDGVHEFFVRKGARI 124
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ + + + N T G +++ Q++ G T + L +
Sbjct: 125 KY--VEKHFGEGNGNGEKVLNPKTIIEVEEGGYAELELVQIK-GVDSTKRDTEIKLHKD- 180
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ ++ Q +S + + K+++++I+S+ ++ S + +S H
Sbjct: 181 AKVVVIERLLTYKNQDAESIINVEMIGKDSSAQIISRSVARDESKQMFHLNMSGHER--- 237
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
R QCDS+++ + +IP I + +S L HEA +I+++ L + G+ E+ A
Sbjct: 238 CRGHIQCDSIIM-DKARVESIPKISAFHSDSQLIHEAAIGRIANDQLIKLMSLGLSEKEA 296
Query: 453 IALIVNGFVR 462
I+ GF++
Sbjct: 297 EDTILKGFLK 306
>gi|255283022|ref|ZP_05347577.1| ABC transporter system permease involved in Fe-S cluster assembly
[Bryantella formatexigens DSM 14469]
gi|255266324|gb|EET59529.1| ABC transporter system permease involved in Fe-S cluster assembly
[Bryantella formatexigens DSM 14469]
Length = 306
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 108/286 (37%), Gaps = 10/286 (3%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
V + +++ G + I G + + +++ G + +
Sbjct: 30 GKSVGRNSTAHIDISTKEDGSGLVIRIQPGTKNE-SVHIPVVLSQSGLHEVVYNDFYIGD 88
Query: 238 GSYVSYLEGC-TAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
V+ + GC ++ H + N+ +KY V+ Y I N T
Sbjct: 89 DCDVTIVAGCGIDNCGIQDSEHDGIHRFYVGKNSRVKY--VEKHYGSGDGKGKRILNPGT 146
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ G + ++ Q++ + K + + G + +++G Q S ++
Sbjct: 147 EVYLQEGTQMEMEMVQIKGVDSTERKTYAEVAAG--AKLLVRESLMTHGEQNAVSSYEVK 204
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
+ ++S+ ++ S + + A S T+CD++++ ++ IP +
Sbjct: 205 LNGDGANADVISRSVARDSSYQKF--DAKIVGNAP-SSGHTECDAIIM-DHARILAIPQL 260
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
E+ + L HEA KI+ E + + G+ E+ A I+NGF+
Sbjct: 261 EANDIDAALVHEAAIGKIAGEQIMKLMTLGLTEKEAEEQIINGFLS 306
>gi|166154028|ref|YP_001654146.1| hypothetical protein CTL0055 [Chlamydia trachomatis 434/Bu]
gi|166154903|ref|YP_001653158.1| hypothetical protein CTLon_0055 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335229|ref|ZP_07223473.1| hypothetical protein CtraL_00295 [Chlamydia trachomatis L2tet1]
gi|165930016|emb|CAP03499.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165930891|emb|CAP06453.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 395
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 94/276 (34%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G L T + + +G+ +S G
Sbjct: 119 EEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGM--SA 176
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ T++ G + + V +RG C
Sbjct: 177 LPDNVYLFGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACA-------LI 228
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q W S L+GE + GE + G + M H + TTSR + I
Sbjct: 229 QDMRSMGKGWFRNSFFLKGEAAHGESLVKVL--GGDFLGVHNTMHHDDRETTSRQNIRSI 286
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 287 LEEGSF-SFEGGIYISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATV 345
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 346 GSLNAHLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|255311515|ref|ZP_05354085.1| ABC transporter membrane protein [Chlamydia trachomatis 6276]
gi|255317816|ref|ZP_05359062.1| ABC transporter membrane protein [Chlamydia trachomatis 6276s]
Length = 395
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 96/276 (34%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G L T + + +G+ +S G
Sbjct: 119 EEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGM--SA 176
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ T++ G + + V +RG C ++ S
Sbjct: 177 LPDNVYLFGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACALIQDMRSM- 234
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
W S L+GE + GE + G + M H + TTSR + I
Sbjct: 235 ------GKGWFRNSFFLKGETAHGESLVKVL--GGDFLGVHNTMHHDDRETTSRQNIRSI 286
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 287 LEEGSF-SFEGGIHISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATV 345
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 346 GSLNAYLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|162072741|gb|ABX82368.1| ABC transporter-associated protein [Chlamydia trachomatis]
Length = 395
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 93/276 (33%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G L T + + +G+ +S G
Sbjct: 119 EEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGM--SA 176
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ T++ G + + V +RG C
Sbjct: 177 LPDNVYLFGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACA-------LI 228
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q W S L+GE + GE + G + M H + TTS + I
Sbjct: 229 QDMRSMGKGWFRNSFFLKGETAHGESLVKVL--GGDFLGVHNTMHHDDRETTSHQNIRSI 286
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 287 LEEGSF-SFEGGIHISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATV 345
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 346 GSLNAYLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|15605419|ref|NP_220205.1| ABC transporter membrane protein [Chlamydia trachomatis D/UW-3/CX]
gi|3329139|gb|AAC68281.1| ABC Transporter Membrane Protein [Chlamydia trachomatis D/UW-3/CX]
gi|296436230|gb|ADH18404.1| ABC transporter membrane protein [Chlamydia trachomatis G/9768]
gi|296437159|gb|ADH19329.1| ABC transporter membrane protein [Chlamydia trachomatis G/11222]
gi|296438090|gb|ADH20251.1| ABC transporter membrane protein [Chlamydia trachomatis G/11074]
gi|297140591|gb|ADH97349.1| ABC transporter membrane protein [Chlamydia trachomatis G/9301]
gi|297748817|gb|ADI51363.1| ABC transporter-associated protein [Chlamydia trachomatis D-EC]
gi|297749697|gb|ADI52375.1| ABC transporter-associated protein [Chlamydia trachomatis D-LC]
Length = 395
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 94/276 (34%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G L T + + +G+ +S G
Sbjct: 119 EEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGM--SA 176
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ T++ G + + V +RG C
Sbjct: 177 LPDNVYLFGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACA-------LI 228
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q W S L+GE + GE + G + M H + TTSR + I
Sbjct: 229 QDMRSMGKGWFRNSFFLKGETAHGESLVKVL--GGDFLGVHNTMHHDDRETTSRQNIRSI 286
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 287 LEEGSF-SFEGGIHISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATV 345
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 346 GSLNAYLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|331002906|ref|ZP_08326419.1| hypothetical protein HMPREF0491_01281 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413199|gb|EGG92573.1| hypothetical protein HMPREF0491_01281 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 351
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 89/250 (35%), Gaps = 9/250 (3%)
Query: 230 RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKG 289
R I A EGS V+ + + A + A NA++K Q D+
Sbjct: 103 RVYIYAQEGSEVNVW-MDYSSNEENVGALAVQTFVYAEKNAKVKLY--QVGLQADNDISL 159
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
G + TQL G + L G++S QI
Sbjct: 160 N------DIGANVDKDASFELTQLLLGGEKIFAGARASLVGKRSEFISELGYYGKSEDQI 213
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D H+ K++ ++++ G+ S RG + RGA + D LL+G +
Sbjct: 214 DLNYVADHIGKSSNCKMIASGVLNDNSKKLLRGTIDFKRGAKDATGEESEDVLLLGEHIH 273
Query: 410 AHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+IP I H A+ + E LFY RG+ +E+ ++ + V +KL
Sbjct: 274 NQSIPVILCAEEDVVGTHGASIGNLDKEMLFYLTSRGMDKESVTKMVARARIDAVSKKLE 333
Query: 470 MEFAVEAQKL 479
E E L
Sbjct: 334 NEALEEKINL 343
>gi|237803116|ref|YP_002888310.1| hypothetical protein JALI_6911 [Chlamydia trachomatis B/Jali20/OT]
gi|237805037|ref|YP_002889191.1| hypothetical protein CTB_6911 [Chlamydia trachomatis B/TZ1A828/OT]
gi|162072739|gb|ABX82367.1| ABC transporter-associated protein [Chlamydia trachomatis]
gi|231273337|emb|CAX10252.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274350|emb|CAX11145.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
Length = 395
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 94/276 (34%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G L T + + +G+ +S G
Sbjct: 119 EEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGM--SA 176
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ T++ G + + V +RG C
Sbjct: 177 LPDNVYLFGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACA-------LI 228
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q W S L+GE + GE + G + M H + TTSR + I
Sbjct: 229 QDMRSMGKGWFRNSFFLKGETAHGESLVKVL--GGDFLGVHNTMHHDDRETTSRQNIRSI 286
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 287 LEEGSF-SFEGGIHISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATV 345
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 346 GSLNAYLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|162072737|gb|ABX82366.1| ABC transporter-associated protein [Chlamydia trachomatis A2497]
Length = 395
Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 94/276 (34%), Gaps = 18/276 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKG-----TGQFERTLIIADEGSYVSYLEGCTAPQ 251
+G+ +YIP+G L T + + +G+ +S G
Sbjct: 119 EEGTVIYIPEGRELQTPLFVQHHYVCSEEENKKTVSVPYIVFVLGKGAAISIEMGM--SA 176
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
+N + AE+ T++ G + + V +RG C
Sbjct: 177 LPDNVYLFGKTLCFLGEEAEL-VLTMKPLPKGTERIIWAHHVEVERRGACA-------LI 228
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
Q W S L+GE + GE + G + M H + TTSR + I
Sbjct: 229 QDMRSMGKGWFRNSFFLKGETAHGESLVKVL--GGDFLGVHNTMHHDDRETTSRQNIRSI 286
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
S ++ G + + S + + D+LL+ N A T P +E H AT
Sbjct: 287 LEEGSF-SFEGGIHISPRGTLSNAYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATV 345
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
++ L Y RG A + F+ ++K
Sbjct: 346 GSLNAYLLTYLRSRGFSLIEAKQALQKSFLTLDIEK 381
>gi|14915785|gb|AAK73807.1| ORF470 [Eimeria langebarteli]
Length = 235
Score = 119 bits (299), Expect = 8e-25, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 131 SKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAA 190
S ++VD V DSVS++ T L K+G+IF+P + I P L+ YL VVP+ DNF+A
Sbjct: 24 STLSVDIVLDSVSIIDTITNFLLKTGIIFVPFFDGINYFPHLIFSYLGVVVPLEDNFFAT 83
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
LNS +F+ GSF YI K ++C + LSTYFR + QFERTLII + + Y EGC+AP
Sbjct: 84 LNSIIFSGGSFCYIKKNIKCNINLSTYFRTQSEDFAQFERTLIIVGNSASIIYTEGCSAP 143
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
E+QLH A+VE+ D I YST+QNWY G+ G+GG+YNF TKRG C S ++
Sbjct: 144 IFLESQLHVALVEIFVKDKGIIDYSTIQNWYRGNQSGEGGLYNFTTKRGWCL-KHSSLNR 202
Query: 311 TQLETGSAITWK 322
Q+E G K
Sbjct: 203 VQIEIGFCYYMK 214
>gi|182701988|ref|ZP_02619146.2| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum Bf]
gi|237796275|ref|YP_002863827.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum Ba4 str. 657]
gi|182672407|gb|EDT84368.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum Bf]
gi|229261316|gb|ACQ52349.1| sufB/sufD domain protein [Clostridium botulinum Ba4 str. 657]
Length = 306
Score = 119 bits (299), Expect = 8e-25, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 97/253 (38%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
+ ++E G + E S V+ + GC H+ + N
Sbjct: 62 NESVHIPVLLSESGFKEMIYNDFYVGENSDVTIIAGCGIHNGGSGASEHSGIHSFFIGKN 121
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++KY V+ Y I N T G + ++ + K +
Sbjct: 122 AKVKY--VEKHYGTGDGNGERIMNPTTIIKIDNG--GYMEMDTVQIEGVNSTKRVTKATL 177
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ S +++G Q ++ ++ N+++ ++S+ ++ S+ + K+ G
Sbjct: 178 KDSSTLVIQEKIMTHGKQTAETEFEVNLDGVNSSTNVISRSVAKDNSHQLFLSKI---NG 234
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
T+CD++++ +N IP I + +L HEA KI E L + G+ E
Sbjct: 235 NNKCAGHTECDAIIM-DNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTE 293
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 294 AEAEEQIINGFLK 306
>gi|266623362|ref|ZP_06116297.1| ABC transporter system permease [Clostridium hathewayi DSM 13479]
gi|288864858|gb|EFC97156.1| ABC transporter system permease [Clostridium hathewayi DSM 13479]
Length = 308
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/250 (16%), Positives = 98/250 (39%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ ++E G + + + V + GC ++ H + N+++
Sbjct: 67 VHIPVVLSESGLTEVVYNDFYIGDDADVVIVAGCGISNCGQQDSRHDGIHRFYLGKNSKV 126
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y I N T S + ++ + +
Sbjct: 127 KY--VEKHYGEGDGNGKRIMNPGT--EVYLEENSYMEMEMVQIKGVDSTNRNTKAELSAG 182
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q+ SG + ++++ ++S+ ++ S T+ ++ +
Sbjct: 183 AKLVIQERLMTHGAQEAVSGFVVNLNGDDSSANVISRAVARDDSRQTF--LAEINGNSRC 240
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ ++CD++++ ++ IP I + N+ L HEA KI+ + + + G+ E A
Sbjct: 241 A-GHSECDAIIM-DHANISAIPKITANNTDAALIHEAAIGKIAGDQIIKLMTLGLSEAEA 298
Query: 453 IALIVNGFVR 462
IVNGF++
Sbjct: 299 ETQIVNGFLK 308
>gi|182701667|ref|ZP_02613911.2| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum NCTC 2916]
gi|226950249|ref|YP_002805340.1| SufBD protein [Clostridium botulinum A2 str. Kyoto]
gi|182669575|gb|EDT81551.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum NCTC 2916]
gi|226841357|gb|ACO84023.1| SufBD protein [Clostridium botulinum A2 str. Kyoto]
Length = 306
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
+ ++E G + E S V+ + GC H+ + N
Sbjct: 62 NESVHIPVLLSESGFKEMIYNDFYVGENSDVTIIAGCGIHNGGSGASEHSGIHSFFIGKN 121
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++KY V+ Y I N T G K+ ++ + K +
Sbjct: 122 AKVKY--VEKHYGTGDGNGERIMNPTTIIKIDNGGYMKMD--TVQIEGVNSTKRVTKATL 177
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ S +++G Q ++ ++ N+++ ++S+ ++ S+ + K+ G
Sbjct: 178 KDSSTLVIQEKIMTHGKQTAETEFEVNLDGVNSSTNVISRSVAKDNSHQLFLSKI---NG 234
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
T+CD++++ +N IP I + +L HEA KI E L + G+ E
Sbjct: 235 NNKCAGHTECDAIIM-DNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTE 293
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 294 AEAEEQIINGFLK 306
>gi|317488651|ref|ZP_07947192.1| hypothetical protein HMPREF1023_00890 [Eggerthella sp. 1_3_56FAA]
gi|316912242|gb|EFV33810.1| hypothetical protein HMPREF1023_00890 [Eggerthella sp. 1_3_56FAA]
Length = 203
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 51/140 (36%)
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
LRG+ + + + + + QQ D + T + + G+ AG S T RG
Sbjct: 34 LDADLRGDDARLDIDTRYLGHASQQRDFNYVAHQRGRRTVCNLDANGVLAGESEKTLRGT 93
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ + G S Q LL T+P I H AT + E LFY
Sbjct: 94 IELVHGCKGSVGSEQETVLLADERVANRTVPVILCDEDDVAGNHGATIGHVRPEQLFYLA 153
Query: 444 QRGIPEEAAIALIVNGFVRE 463
RGI E A L + E
Sbjct: 154 SRGISPEDAERLFITASFEE 173
>gi|126441129|ref|YP_001059729.1| sufB/SufD domain-containing protein [Burkholderia pseudomallei 668]
gi|126220622|gb|ABN84128.1| sufB/sufD domain protein [Burkholderia pseudomallei 668]
Length = 411
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPARRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|28210477|ref|NP_781421.1| hypothetical protein CTC00757 [Clostridium tetani E88]
gi|28202914|gb|AAO35358.1| conserved protein [Clostridium tetani E88]
Length = 322
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ-RDENQLHAAVVELVALDNAEI 272
+ + ++G EGS V + GC H V E A++
Sbjct: 81 VHIPVILTQEGLNDEVYNTFEIGEGSEVEVVAGCGIHNPGHSKTQHDGVHEFFVRKGAKL 140
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYS + Y ++N T G + ++ Q++ G T + L+ E
Sbjct: 141 KYS--EKHYAEGEGKGKKVFNSKTILHVEEGGKVEMEIIQIK-GVDDTKRETEIYLQKE- 196
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ ++ G Q +S ++ +++T++++S+ ++ S ++ V G
Sbjct: 197 ANLVITERMMTEGKQNAESDIQIELKEEDSTAQVISRSVAKDDSKQKFKFNVV---GENK 253
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
R QCDS+++GN +IP I +K++ L HEA KI+++ L + G+ E+ A
Sbjct: 254 CRAHVQCDSIIMGN-SKVESIPAILAKHNEAELIHEAAIGKIANDQLIKLMSLGLNEKEA 312
Query: 453 IALIVNGFVR 462
I+ GF++
Sbjct: 313 EDTILKGFLK 322
>gi|160946988|ref|ZP_02094191.1| hypothetical protein PEPMIC_00950 [Parvimonas micra ATCC 33270]
gi|158447372|gb|EDP24367.1| hypothetical protein PEPMIC_00950 [Parvimonas micra ATCC 33270]
Length = 343
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
NE+ + + A+E S ++ + + + H+ ++E+ A +N+++K Q +
Sbjct: 85 NEENNQLVDVIKVRAEENSTLNLTLDYFSRESVKGFRHS-IIEIEAEENSDVKIYISQRF 143
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
+ Y + + + Q++ G + L S SI
Sbjct: 144 SLEVLSIQSVYY--------IVKENANVEFVQVDLGGRENYVSYIGDLVDNNSNVNVNSI 195
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
Q++D + T + KG A + T + + RG++ S+ +
Sbjct: 196 YFGKNEQKLDFNYVATQRGRATNYDLAIKGALADRAQKTCKVTIDFKRGSSTSKGSEEEY 255
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
L+ ++ +P + H A+ KI + LFY + RG E A LI+
Sbjct: 256 VTLLSDDIKNVAVPILLCTEDDVEGIHAASAGKIDENILFYIMSRGFSESEAKRLILESK 315
Query: 461 VREVLQKLPMEFAVEAQKLIDISLEGSV 488
E + + E E +K + +L +
Sbjct: 316 FAETIDLIENE---EIRKRVYTTLSKKL 340
>gi|170759828|ref|YP_001788157.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum A3 str. Loch Maree]
gi|169406817|gb|ACA55228.1| sufB/sufD domain protein [Clostridium botulinum A3 str. Loch Maree]
Length = 306
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 97/253 (38%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
+ ++E G + E S V+ + GC H+ + N
Sbjct: 62 NESVHIPVLLSESGFKEMIYNDFYVGENSDVTIIAGCGIHNGGSGASEHSGIHSFFIGKN 121
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++KY V+ Y I N T G + ++ + K +
Sbjct: 122 AKVKY--VEKHYGTGDGNGERIMNPTTIIEIDNG--GYMEMDTVQIKGVNSTKRITKANL 177
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + +++G Q ++ ++ N+++ ++S+ ++ S+ + K+ G
Sbjct: 178 EDNATLIVQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKI---NG 234
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
T+CD++++ +N IP I + +L HEA KI E L + G+ E
Sbjct: 235 NNKCVGHTECDAIIM-DNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTE 293
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 294 TEAEEQIINGFLK 306
>gi|293115513|ref|ZP_05791848.2| ABC transporter system permease [Butyrivibrio crossotus DSM 2876]
gi|292809511|gb|EFF68716.1| ABC transporter system permease [Butyrivibrio crossotus DSM 2876]
Length = 318
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 13/255 (5%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
+ +++ G EGS V + GC D+ H + N
Sbjct: 74 NESVHIPVVLSQTGLDDLVYNDFYVGEGSDVLIVAGCGIHNGGDKKSSHDGIHTFHIGKN 133
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A ++Y V+ Y I N T + + + +
Sbjct: 134 ARVRY--VEKHYGEGDGNGLRIMNPTTVVDI--DENGYMEMETTQIKGIDSTDRITKGRL 189
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
G+ + +++G Q + ++ K +++ ++S+ ++ S + K+ G
Sbjct: 190 GDGAVFIVKEKIMTHGKQYAKTSFEVELNGKGSSTNVISRSVAKNDSTQVFYAKID---G 246
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE--HEATTSKISDEHLFYCLQRGI 447
++CD++++ +N IP E +S HEA KI+ E L + G+
Sbjct: 247 NNECAGHSECDAIIM-DNASVKAIP--EITANSVEASLIHEAAIGKIAGEQLIKLMTLGL 303
Query: 448 PEEAAIALIVNGFVR 462
E A IVNGF++
Sbjct: 304 TEAEAEEQIVNGFLK 318
>gi|166032064|ref|ZP_02234893.1| hypothetical protein DORFOR_01766 [Dorea formicigenerans ATCC
27755]
gi|166027787|gb|EDR46544.1| hypothetical protein DORFOR_01766 [Dorea formicigenerans ATCC
27755]
Length = 317
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 15/255 (5%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNA 270
E+ ++ G +EG+ V+ + GC N+ H + N
Sbjct: 74 EEVHIPVVVDATGMTDVVYNDFYIEEGANVTIVAGCGIHNSGCNESRHDGIHTFHVEKNC 133
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++Y V+ Y + N VT G S + + + + +
Sbjct: 134 NVRY--VEKHYGEGEGTGTRVLNPVT--EVYLGENSVFTLDTAQIKGVDSTVRENNVYLE 189
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
S +++G Q+ S + + ++++IVS+ ++ G S + H A
Sbjct: 190 ANSKLYVIEKLMTHGNQEATSNMMVEMNGEGSSAQIVSRSVAKGSSRQIF------HPRA 243
Query: 391 AH---SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
QCDS+++ ++ +IP I +K+ + HEA +I+DE L G+
Sbjct: 244 VGKNLCHAHVQCDSIIM-DHAEVSSIPEINAKHVDAAIIHEAAIGRINDEQLVKLRTLGM 302
Query: 448 PEEAAIALIVNGFVR 462
EE A +I+ F+
Sbjct: 303 TEEEAEGVIIENFLN 317
>gi|160913546|ref|ZP_02076237.1| hypothetical protein EUBDOL_00022 [Eubacterium dolichum DSM 3991]
gi|158434098|gb|EDP12387.1| hypothetical protein EUBDOL_00022 [Eubacterium dolichum DSM 3991]
Length = 264
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 67/186 (36%), Gaps = 5/186 (2%)
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+ + + + L E + + S++IS + + HLA +T+
Sbjct: 81 KGATMHFGYCDLECGQRQVTGHIQLLEEGANVDMRSVSISQD--RKCYDICIEHLAPHTS 138
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+ + + + +GA +S + L + + P + +
Sbjct: 139 GEMQHYALVEDAGSYVMNACGKIIKGAYNSVSHQATRVLTLSEEHHSSVTPTLLIDENDV 198
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
H T + + L+Y RG+ + A+ L+ G++ ++ + V+ Q+ +
Sbjct: 199 KASHAMTLGQPDENQLYYLQTRGLSRKEALGLLSIGYLLPIVAYVND---VDKQQELKNE 255
Query: 484 LEGSVG 489
+E VG
Sbjct: 256 IEKRVG 261
>gi|167825076|ref|ZP_02456547.1| hypothetical protein Bpseu9_15503 [Burkholderia pseudomallei 9]
Length = 360
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 46 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 105
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 106 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 158
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 159 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 217
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 218 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 277
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 278 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 318
>gi|76809548|ref|YP_334209.1| SufD domain-containing protein [Burkholderia pseudomallei 1710b]
gi|126452134|ref|YP_001067013.1| sufB/SufD domain-containing protein [Burkholderia pseudomallei
1106a]
gi|167739468|ref|ZP_02412242.1| hypothetical protein Bpse14_15487 [Burkholderia pseudomallei 14]
gi|167816672|ref|ZP_02448352.1| hypothetical protein Bpse9_16142 [Burkholderia pseudomallei 91]
gi|167846580|ref|ZP_02472088.1| hypothetical protein BpseB_14950 [Burkholderia pseudomallei B7210]
gi|167911797|ref|ZP_02498888.1| hypothetical protein Bpse112_14983 [Burkholderia pseudomallei 112]
gi|217421239|ref|ZP_03452744.1| sufD domain protein [Burkholderia pseudomallei 576]
gi|226199983|ref|ZP_03795533.1| sufD domain protein [Burkholderia pseudomallei Pakistan 9]
gi|242314843|ref|ZP_04813859.1| sufB/sufD domain protein [Burkholderia pseudomallei 1106b]
gi|254191310|ref|ZP_04897814.1| sufB/sufD domain [Burkholderia pseudomallei Pasteur 52237]
gi|254258179|ref|ZP_04949233.1| sufB/sufD domain protein [Burkholderia pseudomallei 1710a]
gi|76579001|gb|ABA48476.1| sufD domain protein [Burkholderia pseudomallei 1710b]
gi|126225776|gb|ABN89316.1| sufD domain protein [Burkholderia pseudomallei 1106a]
gi|157938982|gb|EDO94652.1| sufB/sufD domain [Burkholderia pseudomallei Pasteur 52237]
gi|217396651|gb|EEC36668.1| sufD domain protein [Burkholderia pseudomallei 576]
gi|225928039|gb|EEH24076.1| sufD domain protein [Burkholderia pseudomallei Pakistan 9]
gi|242138082|gb|EES24484.1| sufB/sufD domain protein [Burkholderia pseudomallei 1106b]
gi|254216868|gb|EET06252.1| sufB/sufD domain protein [Burkholderia pseudomallei 1710a]
Length = 411
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|254184276|ref|ZP_04890866.1| sufD domain protein [Burkholderia pseudomallei 1655]
gi|184214807|gb|EDU11850.1| sufD domain protein [Burkholderia pseudomallei 1655]
Length = 411
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|325479169|gb|EGC82266.1| SufB/sufD domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 352
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 97/251 (38%), Gaps = 9/251 (3%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNW 280
N++ I + + S S+L +N + + +++ +K V N
Sbjct: 92 NKENNTLVSNIDINSKKSSESSFLVSIFDDG-SDNIYLNSRINARLEEDSFVKLVVVTNL 150
Query: 281 YPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
I ++ R + + T +E G+ + + +L+GE+S +
Sbjct: 151 NEKAINI-NSIATYLNDR-------AILDVTYIEVGAGKSLVNITNILKGEESQVIENGV 202
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
+G +D H +T S + G + ++G V + RG + +
Sbjct: 203 YFKSGDDFLDLLATNEHFGNDTDSSCMFNGALKDRAEKNFKGIVDLRRGCSKADGKIGDY 262
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
S+++ + + P + ++ + H A+ +++ E LFY + RG ++ A A+++
Sbjct: 263 SMMLSDEVINKSAPVLLNEEKEVSGNHAASVGRLNKEMLFYIMSRGFSKKQAEAMMLEAN 322
Query: 461 VREVLQKLPME 471
L K+ E
Sbjct: 323 FAPALDKIEDE 333
>gi|291562567|emb|CBL41383.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [butyrate-producing bacterium SS3/4]
Length = 308
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 12/263 (4%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAA 260
+YI + T IA +G+ V+ + GC N+ H
Sbjct: 56 IYIDGDTKGEKVYIPVVVSVSGMTDLVYNDFYIA-DGADVTIVAGCGIHNSGCNESRHDG 114
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGG-IYNFVTKRGDCRGMRSKISWTQLETGSAI 319
+ NA + Y Q + GD G GG + N VT G S + +
Sbjct: 115 IHTFHVGKNANVCY---QEKHYGDGNGTGGRVLNPVT--NIYVGENSVFTLDTAQIKGVD 169
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
+ + + + S ++ G Q +S ++ ++++++I+S+ + G S T
Sbjct: 170 STVRETLVEMDKNSRLYVTERLMTEGDQTAESNIEVRLNGEDSSAQIISRSVGKGNSVQT 229
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
+ K G + QCDS+++ ++ +IP I +++ + + HEA +I+DE L
Sbjct: 230 FHPKAV---GNNKCQAHIQCDSIIM-DHAEIGSIPEIRARDLNAAIIHEAAIGRINDEQL 285
Query: 440 FYCLQRGIPEEAAIALIVNGFVR 462
G+ EE A +I+ F+
Sbjct: 286 LKLRTLGLTEEEAENVIIENFLN 308
>gi|268611055|ref|ZP_06144782.1| SufBD protein [Ruminococcus flavefaciens FD-1]
Length = 308
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 8/231 (3%)
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
I D+ + ++ H + N++I+Y V+ Y I
Sbjct: 86 FFIGDDCDVLIVAGCGIDNCGTQDSEHDGIHRFFVGKNSKIRY--VEKHYGSGDGSGKRI 143
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
N VT+ G +++ Q++ G T + L+ + + + +++G Q S
Sbjct: 144 LNPVTELYLDEGSTAELEMVQIK-GVDSTQRTTRAELKKD-AKLLVHERLMTHGEQNAAS 201
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
++ + +++ +VS+ ++ +Y+ +G A T+CDS+++ N
Sbjct: 202 VYQVDLNEEGSSADVVSRSVAKDN---SYQKLDLCVKGNAPCSGHTECDSIIMDNG-RIL 257
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+P +E+ N L HEA KI+ + L + G+ E A I+NGF++
Sbjct: 258 AVPSLEANNIDAALVHEAAIGKIAGDQLIKLMTLGLTEAEAEEQIINGFLK 308
>gi|305682194|ref|ZP_07404998.1| SufB/sufD domain protein [Corynebacterium matruchotii ATCC 14266]
gi|305658667|gb|EFM48170.1| SufB/sufD domain protein [Corynebacterium matruchotii ATCC 14266]
Length = 259
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 13/262 (4%)
Query: 220 INEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQN 279
+ + QF + + + + V ++ G + H +V E A ++ V
Sbjct: 1 MTKPQERQFVHDITVIGKNATVDFVSGAAVAPELTHATHVSVSETYIGAGATVRSIDVDR 60
Query: 280 WYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS-AITWKYPSCLLRGEQSCGEFY 338
W + R ++++ + + + + +
Sbjct: 61 WGA-------NMTVHSYDRTKI-DENARVTSVSVAVSGLKQSVNNSHTEVAAGAAITDHT 112
Query: 339 SIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQ 398
+ G ++ D + + V++ +S G + ++ A R F +
Sbjct: 113 ILFAPTGTRR-DMTNTVSLTGPGAQAEQVARMVSDGGVIVN---RSTLEAAVAEVRGFLE 168
Query: 399 CDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVN 458
CD L++ + +IP +++K + L HEA+ I D+ + Y + G+ E+ A LIV
Sbjct: 169 CDGLMLQDTGQIESIPALDAKVARAQLSHEASVGMIDDDKMDYLMATGLDEDRARDLIVQ 228
Query: 459 GFVREVLQKLPMEFAVEAQKLI 480
GF+ Q++P L+
Sbjct: 229 GFLNLDDQQVPASVRATVDNLV 250
>gi|229579080|ref|YP_002837478.1| FeS assembly protein SufD [Sulfolobus islandicus Y.G.57.14]
gi|229582179|ref|YP_002840578.1| FeS assembly protein SufD [Sulfolobus islandicus Y.N.15.51]
gi|284997678|ref|YP_003419445.1| hypothetical protein LD85_1407 [Sulfolobus islandicus L.D.8.5]
gi|228009794|gb|ACP45556.1| FeS assembly protein SufD [Sulfolobus islandicus Y.G.57.14]
gi|228012895|gb|ACP48656.1| FeS assembly protein SufD [Sulfolobus islandicus Y.N.15.51]
gi|284445573|gb|ADB87075.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5]
Length = 389
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 96/281 (34%), Gaps = 14/281 (4%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN ++ + + + + E +N+ +I + +
Sbjct: 102 NDNVISSDEHKLVSLAYSLSRRITISNEGEYHVRHVVNKNKYLLPSHLIINVPKDKQIKV 161
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+ E L ++ + D + + + V
Sbjct: 162 I--YEGLNLGEGSLITPIISVNIEDGSTLDFQFVNFSSNNSLLFS----------YIKAN 209
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
++ + + G+ + + L E S EF S A +ID ++HL + +
Sbjct: 210 IKGTMHSSIFVNGNKMGHVQFNTRL-EEGSVSEFSSRAFGTHNNKIDVVNNVIHLGQRSV 268
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S K IS + RG ++ A +S SL++G + A P +E K
Sbjct: 269 SNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLGKDAKAVVSPMLEVKTGRV 328
Query: 424 NLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H A S+I + +FY RG+ + A +I+ GF+ E
Sbjct: 329 VMAKHSAAVSRIDENQIFYLQTRGLSKREAEGIIIRGFIIE 369
>gi|14915781|gb|AAK73805.1| ORF470 [Eimeria separata]
Length = 234
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 122/199 (61%), Gaps = 1/199 (0%)
Query: 108 LLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAIC 167
+ T+ + I G S ++VD V DSVS+V T L K+G+IF+P + I
Sbjct: 1 ITATFNSILEKIG-LNTQEGNIISTLSVDVVLDSVSIVDTITNFLLKAGIIFIPFFDGIN 59
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQ 227
P L+ Y+ TVV + DNF+A LNS +F+ GSF YI K ++C + LSTYFR + Q
Sbjct: 60 YFPYLIFSYIGTVVSLEDNFFATLNSIIFSGGSFCYIAKNIKCNINLSTYFRTQSEDFAQ 119
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
FERTL+I ++ S V Y EGC+AP E+QLH A+VE++ + + YSTVQNWY GD G
Sbjct: 120 FERTLLIVNDFSSVIYTEGCSAPIFLESQLHVALVEILIKNKGTLNYSTVQNWYRGDQSG 179
Query: 288 KGGIYNFVTKRGDCRGMRS 306
+GG+YNF TKRG C
Sbjct: 180 EGGLYNFTTKRGWCLKNAC 198
>gi|167919800|ref|ZP_02506891.1| hypothetical protein BpseBC_14724 [Burkholderia pseudomallei
BCC215]
Length = 359
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 45 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 104
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 105 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 157
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 158 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 216
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 217 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 276
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 277 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 317
>gi|167903548|ref|ZP_02490753.1| hypothetical protein BpseN_14936 [Burkholderia pseudomallei NCTC
13177]
Length = 411
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|167895163|ref|ZP_02482565.1| hypothetical protein Bpse7_15549 [Burkholderia pseudomallei 7894]
Length = 358
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 44 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 103
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 104 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 156
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 157 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 215
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 216 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 275
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 276 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 316
>gi|134277540|ref|ZP_01764255.1| sufD domain protein [Burkholderia pseudomallei 305]
gi|134251190|gb|EBA51269.1| sufD domain protein [Burkholderia pseudomallei 305]
Length = 411
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|53719978|ref|YP_108964.1| hypothetical protein BPSL2371 [Burkholderia pseudomallei K96243]
gi|254195814|ref|ZP_04902240.1| sufB/sufD domain [Burkholderia pseudomallei S13]
gi|254296938|ref|ZP_04964391.1| sufB/sufD domain [Burkholderia pseudomallei 406e]
gi|52210392|emb|CAH36373.1| hypothetical protein BPSL2371 [Burkholderia pseudomallei K96243]
gi|157806898|gb|EDO84068.1| sufB/sufD domain [Burkholderia pseudomallei 406e]
gi|169652559|gb|EDS85252.1| sufB/sufD domain [Burkholderia pseudomallei S13]
Length = 411
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRVEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|237813122|ref|YP_002897573.1| SufB/sufD domain protein [Burkholderia pseudomallei MSHR346]
gi|237505210|gb|ACQ97528.1| SufB/sufD domain protein [Burkholderia pseudomallei MSHR346]
Length = 411
Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQHAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|291543835|emb|CBL16944.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Ruminococcus sp. 18P13]
Length = 308
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 96/258 (37%), Gaps = 9/258 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDE-NQLHAAVVEL 264
K + I+E G E V+ + GC + H +
Sbjct: 59 KPGTVNESVHIPVIISESGLKDNVYNDFFIGENCDVTIIAGCGIHNCGSGDSQHDGIHTF 118
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
+N++++Y V+ Y N T R R ++ TQ+ K
Sbjct: 119 FVGENSKVRY--VEKHYGEGEGRGKRFMNPTTIVHLNRNARMEMETTQIAGIDDTLRK-T 175
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ L E S + ++ G Q + ++ IVS+ ++ S Y
Sbjct: 176 TADL-AEGSSLVIHDKIMTTGDQHAIAEFDADLNGAGSSCNIVSRSVAKENSRQEY--TS 232
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
++ A S T+CD++++ + C P + + + +L HEA KI+ E L +
Sbjct: 233 RLNGNAPCS-GHTECDAIIMDHGC-VLASPQLTANHVDASLIHEAAIGKIAGEQLMKLMT 290
Query: 445 RGIPEEAAIALIVNGFVR 462
G+ E+ A I+NGF++
Sbjct: 291 LGLTEKEAEEQIINGFLK 308
>gi|260425191|ref|ZP_05734476.2| FeS assembly protein SufD [Dialister invisus DSM 15470]
gi|260404447|gb|EEW97994.1| FeS assembly protein SufD [Dialister invisus DSM 15470]
Length = 357
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 106/296 (35%), Gaps = 16/296 (5%)
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+A V IP+ + +S + + ++ + ++ +
Sbjct: 72 AAAEKGQAYTVIIPENTEAELTISITAEEDRPDFAG--CFIFKLEKDAKLNLI--WRLSG 127
Query: 252 RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT 311
++ + A ++NA + S ++ P S +R G +K+ +
Sbjct: 128 DRKHSVFATASFYELMENAALSVSYLETGLPASS--------LYEQRCAVLGDDAKLDFV 179
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
E G + L G S ++ + G Q +D + H+ K + + I KG
Sbjct: 180 SAELGGEKVIVHSYGRLAGSWSEMRETALYAAAGRQSLDLFYHIDHIGKESNAVIDVKGA 239
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
+ + +RG + RG + S ++ + ++P + + H ++
Sbjct: 240 LSDTAKKIFRGTLDFKRGCSGSVGDEGDYAIQLSPKTKNISLPLLLCTEDDVSGNHASSA 299
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP----MEFAVEAQKLIDIS 483
++ +++ + RG E A ++V +R ++ +L E E ++ +D
Sbjct: 300 GQLDMNTIYFLMTRGFSLEDARLIVVEALIRPLIDRLDESVREEVLAEVRRKLDTK 355
>gi|308234379|ref|ZP_07665116.1| SufBD protein [Atopobium vaginae DSM 15829]
gi|328944195|ref|ZP_08241659.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
gi|327491114|gb|EGF22889.1| FeS assembly protein SufB [Atopobium vaginae DSM 15829]
Length = 407
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/280 (19%), Positives = 93/280 (33%), Gaps = 12/280 (4%)
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+V D + IPKG + + + + T II EG+ + + +
Sbjct: 97 WIESVAPDAHVIEIPKGTKRTEPVVV---DVNADAHEAKDTGIIVREGAEATIVL-VSYG 152
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
+ ++ A + +VA + I + + + R+KI
Sbjct: 153 KEAQDTTSANLARIVAERESVIHLVEI--------VAMNDTHQHLQGVALDVDDRAKIDV 204
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
Q G SC L G S + + +++D +NT ++S G
Sbjct: 205 HQYALGGKKVAFGFSCDLHGNSSRLDLMLRYFTCEHERLDVNHLCRQRGRNTRCTMLSNG 264
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
I ++ T R + + GA S+ L+ +N T+P I H A+
Sbjct: 265 ILTDYAYKTLRETIDLVHGAKGSKGNEAETVLVASDNVMNETLPVILCDEDDVLGNHGAS 324
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
I E L Y RG+ EE A L + P
Sbjct: 325 IGSIGPEQLAYLADRGLTEEEANKLFTRAIFDDAAIHAPD 364
>gi|170756295|ref|YP_001782448.1| ABC transporter system permease involved in Fe-S cluster assembly
[Clostridium botulinum B1 str. Okra]
gi|169121507|gb|ACA45343.1| sufB/sufD domain protein [Clostridium botulinum B1 str. Okra]
Length = 306
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 97/258 (37%), Gaps = 9/258 (3%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVEL 264
K + ++E G + E S V+ + GC E H
Sbjct: 57 KPNTMNESVHIPVLLSESGFKEMIYNDFYVGENSDVTIIAGCGIHNGGSEASEHNGTHSF 116
Query: 265 VALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYP 324
NA++KY V+ Y I N T G + ++ + K
Sbjct: 117 FIGKNAKVKY--VEKHYGTGDGNGERIMNPTTIIKIDNG--GYMEMDTVQIEGVNSTKRV 172
Query: 325 SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ + S +++G Q ++ ++ N+++ ++S+ ++ S+ + K+
Sbjct: 173 TKATLKDSSTLVIQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKI 232
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
G T+CD++++ +N IP I + +L HEA KI E L +
Sbjct: 233 ---NGNNKCAGHTECDAIIM-DNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMT 288
Query: 445 RGIPEEAAIALIVNGFVR 462
G+ E A I+NGF++
Sbjct: 289 LGLTEIEAEEQIINGFLK 306
>gi|187778575|ref|ZP_02995048.1| hypothetical protein CLOSPO_02170 [Clostridium sporogenes ATCC
15579]
gi|187772200|gb|EDU36002.1| hypothetical protein CLOSPO_02170 [Clostridium sporogenes ATCC
15579]
Length = 306
Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 97/253 (38%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDN 269
+ ++E G + E S V+ + GC + H + N
Sbjct: 62 NESVHIPVLLSESGFKEMIYNDFYVGENSDVTIIAGCGIHNDGSKESEHNGIHSFFIGKN 121
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A++KY V+ Y I N T G + ++ + K +
Sbjct: 122 AKVKY--VEKHYGTGDGNGERIMNPTTIIKIDNG--GYMEMDTVQIEGVNSTKRVTKATL 177
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ S +++G Q ++ ++ N+++ ++S+ ++ S+ + K+ G
Sbjct: 178 KDSSTLVIQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKI---NG 234
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
T+CD++++ +N IP I + +L HEA KI E L + G+ E
Sbjct: 235 NNKCAGHTECDAIIM-DNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTE 293
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 294 IEAEEQIINGFLK 306
>gi|323477351|gb|ADX82589.1| FeS assembly protein SufD [Sulfolobus islandicus HVE10/4]
Length = 389
Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 96/281 (34%), Gaps = 14/281 (4%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN ++ + + + + E +N+ +I + +
Sbjct: 102 NDNVISSDEHKLVSLAYSLSRRITISNEGEYHVRHVVNKNKYLLPSHLIINVPKDKQIKV 161
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+ E L ++ + D + + + V
Sbjct: 162 I--YEGLNLGEGSLITPIISVNIEDGSTLDFQFVNFSSNNSLLFS----------YIKAN 209
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
++ + + G+ + + L E S EF S A +ID ++HL + +
Sbjct: 210 IKGTMHSSIFVNGNKMGHVQFNTRL-EEGSVSEFSSRAFGTHSNKIDVVNNVIHLGQRSV 268
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S K IS + RG ++ A +S SL++G + A P +E K
Sbjct: 269 SNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLGKDAKAVVSPMLEVKTGRV 328
Query: 424 NLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H A S+I + +FY RG+ + A +I+ GF+ E
Sbjct: 329 VMAKHSAAVSRIDENQIFYLQTRGLSKREAEGIIIRGFIIE 369
>gi|227827568|ref|YP_002829348.1| FeS assembly protein SufD [Sulfolobus islandicus M.14.25]
gi|227830255|ref|YP_002832035.1| FeS assembly protein SufD [Sulfolobus islandicus L.S.2.15]
gi|229584771|ref|YP_002843273.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.27]
gi|238619725|ref|YP_002914551.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.4]
gi|227456703|gb|ACP35390.1| FeS assembly protein SufD [Sulfolobus islandicus L.S.2.15]
gi|227459364|gb|ACP38050.1| FeS assembly protein SufD [Sulfolobus islandicus M.14.25]
gi|228019821|gb|ACP55228.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.27]
gi|238380795|gb|ACR41883.1| FeS assembly protein SufD [Sulfolobus islandicus M.16.4]
gi|323474619|gb|ADX85225.1| FeS assembly protein SufD [Sulfolobus islandicus REY15A]
Length = 389
Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 96/281 (34%), Gaps = 14/281 (4%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
DN ++ + + + + E +N+ +I + +
Sbjct: 102 NDNVISSDEHKLVSLAYSLSRRITISNEGEYHVRHVVNKNKYLLPSHLIINVPKDKQIKV 161
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+ E L ++ + D + + + V
Sbjct: 162 I--YEGLNLGEGSLITPIISVNIEDGSTLDFQFVNFSSNNSLLFS----------YIKAN 209
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
++ + + G+ + + L E S EF S A +ID ++HL + +
Sbjct: 210 IKGTMHSSIFVNGNKMGHVQFNTRL-EEGSVSEFSSRAFGTHSNKIDVVNNVIHLGQRSV 268
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S K IS + RG ++ A +S SL++G + A P +E K
Sbjct: 269 SNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLGKDAKAVVSPMLEVKTGRV 328
Query: 424 NLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H A S+I + +FY RG+ + A +I+ GF+ E
Sbjct: 329 VMAKHSAAVSRIDENQIFYLQTRGLSKREAEGIIIRGFIIE 369
>gi|158521573|ref|YP_001529443.1| SufBD protein [Desulfococcus oleovorans Hxd3]
gi|158510399|gb|ABW67366.1| SufBD protein [Desulfococcus oleovorans Hxd3]
Length = 306
Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 97/250 (38%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDNAEI 272
+ ++ +G E + V + GC E + H V E A I
Sbjct: 65 VHIPVILSAEGMKDVVYNTFEIGEDADVLIVAGCGIHNAGGETEQHDGVHEFFIRKGARI 124
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+Y V+ Y + N T G ++ Q+ G T + L ++
Sbjct: 125 RY--VEKHYGEGPGTGKRVLNPKTVIHAEDGAVVELELVQI-MGVDDTRRDTEITL-ADR 180
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++ Q+ SG + ++ +++++S+ ++ G S + + G +
Sbjct: 181 AKLVVTERLLTDFSQKAASGIDIRINGEDASAQVISRSVARGNSRQEF---LFNLDGYSR 237
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
R QCD++++ +N + P I + L HEA ++ + L + G+ E+ A
Sbjct: 238 CRGHIQCDAIIM-DNAVVISTPKIGAFCEHAQLVHEAAIGRLESQQLLKLMSLGLSEKEA 296
Query: 453 IALIVNGFVR 462
I+ GF++
Sbjct: 297 EDTILKGFLK 306
>gi|329572249|gb|EGG53909.1| FeS assembly protein SufD family protein [Enterococcus faecalis
TX1467]
Length = 252
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 101/270 (37%), Gaps = 38/270 (14%)
Query: 36 LNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSI 95
L+E + S + EP WM E R A R + P R+++ +++ +
Sbjct: 10 LDE--VTAFSLEHEEPAWMTELRTTALRNADESELPHIDRVKFHRWPLLNVHMES----- 62
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
E + + Q + S L +
Sbjct: 63 ---------------------YVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQ 101
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
GVIF I A+ EHP+LVK+Y V ++ A ++A G F+Y+PK V +
Sbjct: 102 GVIFTDIFTALQEHPELVKEYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPI 161
Query: 215 STYFRINEK-GTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH-AAVVELVALDNAEI 272
+ F + F+ LI+AD S SYLE + + VVE++A D A++
Sbjct: 162 ESLFIQDSDSNQPFFKHVLIVADNHSEFSYLERFQSTGHPAEKASGNIVVEVIAKDGAKV 221
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCR 302
KYS V + ++ +RG
Sbjct: 222 KYSAVDQLG-------QTVTTYMNRRGYIM 244
>gi|317056802|ref|YP_004105269.1| SufBD protein [Ruminococcus albus 7]
gi|315449071|gb|ADU22635.1| SufBD protein [Ruminococcus albus 7]
Length = 308
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
+ ++E G + E V + GC +++ H V N
Sbjct: 64 NESVHIPVVLSESGLKETVYNDFYVGEDCDVLIVAGCGIDNCGNQDSEHDGVHRFFVGKN 123
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
++++Y V+ Y + N VT S + ++ + +
Sbjct: 124 SKVRY--VEKHYGSGDGTGKRVLNPVT--EVYMEENSTVDMEMVQIKGVDSTDRKTIAEL 179
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
E + +++G QQ S ++ + + + +VS+ ++ +Y+ G
Sbjct: 180 KEGAKLNVRERLMTHGEQQALSTYQVSLNGEGSAADVVSRSVARDD---SYQKLDLCING 236
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A T+CDS+++ N +P +E+ L HEA KI+ E L + G+ E
Sbjct: 237 NAACTGHTECDSIIMDNG-RILAVPSLEANCVDAALVHEAAIGKIAGEQLIKLMTLGLTE 295
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 296 TEAEEQIINGFLK 308
>gi|313901220|ref|ZP_07834708.1| SufB/sufD domain protein [Clostridium sp. HGF2]
gi|312954178|gb|EFR35858.1| SufB/sufD domain protein [Clostridium sp. HGF2]
Length = 262
Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 5/187 (2%)
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
+ ++ E + T + L E + S I+ + + HL +T
Sbjct: 78 HRDASLTLALCELNAGNTQARVTLDLCEEGAFAMLRSACIA--ASRKQFHMQCNHLQAHT 135
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
+ + + + +GA S + + L + + +P + +
Sbjct: 136 EGLMENYAVVEEGGQYRMEATGKIIKGARESNSHQKTRVLTMSERHSSEVVPVLLIDEND 195
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDI 482
H T + + L+Y RG+ A+ L+ G++ + + E E + +
Sbjct: 196 VKASHATTLGQPDENQLYYLQTRGLSRRQALGLLTVGYIMPITELFDQE---EVRTALKD 252
Query: 483 SLEGSVG 489
+E VG
Sbjct: 253 EIEMKVG 259
>gi|53725710|ref|YP_102398.1| SufD domain-containing protein [Burkholderia mallei ATCC 23344]
gi|67641808|ref|ZP_00440575.1| sufD domain protein [Burkholderia mallei GB8 horse 4]
gi|121601008|ref|YP_993707.1| SufD domain-containing protein [Burkholderia mallei SAVP1]
gi|124386146|ref|YP_001028834.1| SufD domain-containing protein [Burkholderia mallei NCTC 10229]
gi|126449411|ref|YP_001081255.1| SufD domain-containing protein [Burkholderia mallei NCTC 10247]
gi|167001116|ref|ZP_02266917.1| sufD domain protein [Burkholderia mallei PRL-20]
gi|254178362|ref|ZP_04885017.1| sufD domain protein [Burkholderia mallei ATCC 10399]
gi|254199298|ref|ZP_04905664.1| sufD domain protein [Burkholderia mallei FMH]
gi|254205609|ref|ZP_04911961.1| sufD domain protein [Burkholderia mallei JHU]
gi|254357770|ref|ZP_04974043.1| sufD domain protein [Burkholderia mallei 2002721280]
gi|52429133|gb|AAU49726.1| sufD domain protein [Burkholderia mallei ATCC 23344]
gi|121229818|gb|ABM52336.1| sufD domain protein [Burkholderia mallei SAVP1]
gi|124294166|gb|ABN03435.1| sufD domain protein [Burkholderia mallei NCTC 10229]
gi|126242281|gb|ABO05374.1| sufD domain protein [Burkholderia mallei NCTC 10247]
gi|147748894|gb|EDK55968.1| sufD domain protein [Burkholderia mallei FMH]
gi|147753052|gb|EDK60117.1| sufD domain protein [Burkholderia mallei JHU]
gi|148026897|gb|EDK84918.1| sufD domain protein [Burkholderia mallei 2002721280]
gi|160699401|gb|EDP89371.1| sufD domain protein [Burkholderia mallei ATCC 10399]
gi|238522796|gb|EEP86238.1| sufD domain protein [Burkholderia mallei GB8 horse 4]
gi|243063065|gb|EES45251.1| sufD domain protein [Burkholderia mallei PRL-20]
Length = 411
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRASTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 369
>gi|323341669|ref|ZP_08081902.1| hypothetical protein HMPREF0357_10082 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322464094|gb|EFY09287.1| hypothetical protein HMPREF0357_10082 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 264
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 5/195 (2%)
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
V ++ E K+ G S EF I+ +
Sbjct: 69 LVVNEHIKLHEHAQFVANYGEMSKGNHQKHTHIEYLGIGSHCEFKGAVIAFNKLKWTI-- 126
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
K H A+ + + + I + S+ +G + S + +G
Sbjct: 127 KADHQARKSYAMVECNAIVLNKGSLNLEVIGSISKGNSGSETHQMSRIMNLGEEVHGVVY 186
Query: 414 PYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFA 473
P + + H A+ + ++EH++Y RG+ E A+ LI+ G++ ++ + E
Sbjct: 187 PMLLIDENDVAASHAASVGQPNEEHIYYLQSRGLTREDALRLIIMGYLMPIVDAIDDET- 245
Query: 474 VEAQKLIDISLEGSV 488
+ + + V
Sbjct: 246 --IKAQLKEEITEKV 258
>gi|257067124|ref|YP_003153380.1| SufBD protein [Anaerococcus prevotii DSM 20548]
gi|256799004|gb|ACV29659.1| SufBD protein [Anaerococcus prevotii DSM 20548]
Length = 350
Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 90/239 (37%), Gaps = 9/239 (3%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I A E S S+L ++ L++ + N+ +K V N +
Sbjct: 102 IKASEASRSSFLINIFDDGSEKIFLNSRI-RAKLDKNSYVKIVVVTNLGKDATN------ 154
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ G + + T +E G+ + +L+G++S + G +D
Sbjct: 155 --LNSIGTYLAEDAILDITYIEVGAGKSLVNIDNILKGDRSKVIQKGVYFKEGDDFLDIL 212
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
H +T S + G + ++G V + RG + S+++ ++ +
Sbjct: 213 ATNEHFGTDTDSECMFNGALKDRAEKNFKGVVDLRRGCHKADGKIGDYSMMLSDDVINKS 272
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P + ++ H A+ +++ E LFY + RG ++ A A+++ + + E
Sbjct: 273 APILLNEEREVAGNHAASVGRLNKEMLFYIMSRGFSKKQAEAMMLEANFAPAIDNIEDE 331
>gi|315652497|ref|ZP_07905481.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485213|gb|EFU75611.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 355
Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 101/271 (37%), Gaps = 12/271 (4%)
Query: 217 YFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYST 276
+K R I A + S VS A + + A + A +NA+++
Sbjct: 90 ISICRDKENLAKVRVYIYAAKDSDVSVW-MDYASNEENSGALAVQTFVFAQNNAKVRLY- 147
Query: 277 VQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGE 336
Q D G + QL G + L G++S E
Sbjct: 148 -QAGLQSDGDISLN------DIGASVDKYASFELVQLLLGGNKIFAGARTSLVGKRSEFE 200
Query: 337 FYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNF 396
QID H+AK++ S++++ G+ S+ RG + RGA +
Sbjct: 201 SELGYYGKAKDQIDLNYVADHIAKSSKSKMITSGVLNDNSSKLLRGTIDFKRGAKEAVGE 260
Query: 397 TQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALI 456
D LL+G + +IP I H A+ + +E LFY RG+ +E+ ++
Sbjct: 261 ESEDVLLLGQDIHNQSIPIILCAEEDVVGTHGASIGNLDEEMLFYLTSRGMDKESVTRMV 320
Query: 457 VNGFVREVLQKLPMEFAVEAQKLIDISLEGS 487
+ + +KL V ++ I++ L GS
Sbjct: 321 ARARIDAIGKKLE---NVALEEKINVYLGGS 348
>gi|167720478|ref|ZP_02403714.1| sufB/sufD domain [Burkholderia pseudomallei DM98]
Length = 411
Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 97/281 (34%), Gaps = 11/281 (3%)
Query: 182 PVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGS 239
D+ + A+ G + I G R+ +G + +I G
Sbjct: 97 SPDDDAAPFFWAHRALCETGLRLRIGSGPAQRAPTMLQLRLPAQGRAEAPLVVIDVMPGV 156
Query: 240 YVSYLEGCTAPQRDENQLHAAVV-ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+ +E + L + + A + + + D I + V
Sbjct: 157 HCVLVESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARD-----RIAHHVH-- 209
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
C ++ + L +GS + LRGE++ + ++ +++ + H
Sbjct: 210 -VCLQRDAQYRQSLLASGSEYHLQRTVLELRGERAVARASGVLFASSQAKLEQQVRAAHA 268
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A T S I + +++G + S+ GA+ + + + P++E
Sbjct: 269 APRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVVLRPHLEI 328
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H T + ++ LFY QRG+ A+A+IV G
Sbjct: 329 HHDDVQAAHGTTWGALPEDALFYACQRGLSRRDALAMIVAG 369
>gi|283769605|ref|ZP_06342501.1| SufB/sufD domain protein [Bulleidia extructa W1219]
gi|283103873|gb|EFC05259.1| SufB/sufD domain protein [Bulleidia extructa W1219]
Length = 266
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 84/265 (31%), Gaps = 16/265 (6%)
Query: 232 LIIADEGSYVSYLEGCTAPQ---------RDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
+I+ + + EG T EN A V + + + T
Sbjct: 1 MILVRSDAEIHLEEGLTEILVDTDRDVELSLENHSENAQVFIRLKKVGKFHFRTFNYANS 60
Query: 283 GDSQGKGGIYN--FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSI 340
N T+ +K E + LR + G S
Sbjct: 61 STCYLVWNCLNNPLETQEHHEVMADAKAHVLYAELSKQEVKRDVWMALREPNAHGLVGSS 120
Query: 341 AISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCD 400
A+ + +++LA +T I + + + + G+ S++ Q
Sbjct: 121 ALVANRYHLV--QNVVNLAPHTLGEIQNFAVVLKGGDLYIDAIGKIVNGSFKSQSHQQSR 178
Query: 401 SLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF 460
++ + IP + + H T ++ E +FY RG+ + + ALI G+
Sbjct: 179 AMCFEEGQKSTIIPELIIDENDVQASHAMTIGRMDAETMFYLQSRGLTAKQSTALIARGY 238
Query: 461 VREVLQKLPMEFAVEAQKLIDISLE 485
++ + L E E + + LE
Sbjct: 239 LQSMTHFLNDE---ELNQKLSEELE 260
>gi|256545624|ref|ZP_05472982.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Anaerococcus vaginalis ATCC 51170]
gi|256398701|gb|EEU12320.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane component [Anaerococcus vaginalis ATCC 51170]
Length = 348
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 10/266 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTL-IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
+L ++ + Q + I A +GS S+L + + + L +++ + ++
Sbjct: 79 EKDLEFINLNLDENSNQLVNKIDINAKKGSKSSFLINFSQTKGKSSYL-NSLIRVNLEED 137
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
+ N + G R+ + +E G+ ++ L
Sbjct: 138 SF-------VKLVVVVDLLENSLNL-QQISSIIGDRANFDISYIELGADKSYVNIRNFLD 189
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
GE+S E + +D G H AK T S + G G + ++G V + RG
Sbjct: 190 GEESNLEENGVYFKQNEDFLDIGAFNDHKAKVTKSNCMFNGALKGKAEKRWKGVVDLKRG 249
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
H+ ++++ + + P + ++ EH A+ + LFY + RG +
Sbjct: 250 CEHADGKIGDYAVMLSPDAINRSAPVLLNEEKDVTGEHAASVGRFDKAMLFYIMSRGFSK 309
Query: 450 EAAIALIVNGFVREVLQKLPMEFAVE 475
A +L++ + K+ E E
Sbjct: 310 RKAESLMLEANFAPTIDKIDHEELRE 335
>gi|297526699|ref|YP_003668723.1| SufBD protein [Staphylothermus hellenicus DSM 12710]
gi|297255615|gb|ADI31824.1| SufBD protein [Staphylothermus hellenicus DSM 12710]
Length = 372
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
+T + LL GE S + +ID+ T ++ ++T S+ + + +
Sbjct: 199 IAGKMTRFTITDLLDGEDSESNIRGTVFTTKQNRIDNITDIVSRNRDTYSKYLFTSLVSD 258
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE-HEATTSK 433
RG ++ A S ++LL+ ++ A+ P +E + H A
Sbjct: 259 KGVVGQRGVGKIYDNAWGSGIEYYSEALLLSDDAKAYLQPRLEIDTGDVKIAKHAARNIH 318
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
I E +FY RGI ++A L++ G++ ++++P
Sbjct: 319 ILPEQIFYLQTRGIDYDSARKLVITGYL---IKEIP 351
>gi|126465027|ref|YP_001040136.1| SufBD protein [Staphylothermus marinus F1]
gi|126013850|gb|ABN69228.1| SufBD protein [Staphylothermus marinus F1]
Length = 369
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 4/171 (2%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + ++ L T +T + LL GE S I S +ID+ ++
Sbjct: 182 IKQEKYTLLNLIYLATVGKMTRLIITDLLDGEDSESNIRGIVFSTKQSRIDNIADIISRN 241
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
++T S+ + + + RG + A S ++LL+ + A+ P +E
Sbjct: 242 RDTYSKYLFTSLISDNGVVAQRGLGKILDNAWGSGIEYYSEALLLSDEARAYLQPRLEID 301
Query: 420 NSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ H A + E +FY RGI A L++ G++ L+++P
Sbjct: 302 TGDVRIAKHAARNIHVLPEQIFYLQTRGIDYNLARKLVIKGYL---LKEIP 349
>gi|83721302|ref|YP_442327.1| SufD domain-containing protein [Burkholderia thailandensis E264]
gi|257138525|ref|ZP_05586787.1| SufD domain-containing protein [Burkholderia thailandensis E264]
gi|83655127|gb|ABC39190.1| sufD domain protein [Burkholderia thailandensis E264]
Length = 412
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 102/296 (34%), Gaps = 12/296 (4%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ + + D+ + A+ G + I G + R+ +
Sbjct: 83 DCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLRIGSGPAHRAPVMLQLRLQSNAS 142
Query: 226 GQFERTLIIADEGSYVSYLEGCTAP--QRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
+ +I G++ +E R + A + + V
Sbjct: 143 VEAPLVVIDVMPGAHCMLVESHEHDAGGRGGPITQNLHAYVRLGAGATLDHLRVATPGAR 202
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D I + V R ++ + L +GS + LRGE++ G +
Sbjct: 203 D-----RIAHHVHVRI---EHDAQYRQSLLASGSEYHLQRTVLDLRGERALGRASGALFA 254
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+ +++ + +H + NT S I + ++ G + S+ GA+ + + +
Sbjct: 255 SAHARLEQQVRAMHASPNTQSAIDALALAGGHAQIVANAFSSIAAGASGADLRQRLSGIP 314
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
G P++E + H AT + ++ LFY QRG+ A+A+IV G
Sbjct: 315 TGGEPRVVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAG 370
>gi|317057074|ref|YP_004105541.1| SufBD protein [Ruminococcus albus 7]
gi|315449343|gb|ADU22907.1| SufBD protein [Ruminococcus albus 7]
Length = 269
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 1/176 (0%)
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
++K G + I QL T + L G +S NG ++D
Sbjct: 77 ISKLGISLEDNADIELIQL-YLGGDTVSEIAARLDGAKSVFNAKIGYQLNGEDKLDINLI 135
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
H + ++S I+ G+ + T++G + GA ++ + D +++ T+P
Sbjct: 136 AEHTGRKSSSEIMVNGVLNDNAAKTFKGTIDFKNGAVGAQGSEKEDVIMMSEKVRNKTVP 195
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPM 470
I H AT +I D+H+FY RGIPEE L+ + +++ +
Sbjct: 196 VILCAEEDVVGNHGATIGRIDDKHVFYMKSRGIPEEKIYELMARSKLAQIIAPIDD 251
>gi|223984306|ref|ZP_03634450.1| hypothetical protein HOLDEFILI_01744 [Holdemania filiformis DSM
12042]
gi|223963739|gb|EEF68107.1| hypothetical protein HOLDEFILI_01744 [Holdemania filiformis DSM
12042]
Length = 279
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 75/218 (34%), Gaps = 10/218 (4%)
Query: 276 TVQNWYPGDSQGKGGIYN-----FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
T+Q SQ +N + + ++ ++ + LL+
Sbjct: 58 TIQVRAEAASQLTLLYWNESSAPITIRESNEIYRDARFKAAYVQLNPGMVDHQSKTLLKE 117
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ S I+ + ++H A TT + + I + +GA
Sbjct: 118 SGAEALVQSAVIA--QTRKQFVVDLIHQAGQTTGIMENYSIVLQGGRYRMEATGKIEKGA 175
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
+++ +L A +P + + H T ++ + ++Y RG+ E+
Sbjct: 176 RGAKSHQTSRALTFDAQQTATILPKLLIDENDVEASHATTIGQMDENQMYYLQSRGLSED 235
Query: 451 AAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
AI L+ G++ + ++ + Q+ + +E V
Sbjct: 236 EAIRLVTIGYLLPIA-RISDDPK--LQEALAQEIETKV 270
>gi|302335475|ref|YP_003800682.1| SufBD protein [Olsenella uli DSM 7084]
gi|301319315|gb|ADK67802.1| SufBD protein [Olsenella uli DSM 7084]
Length = 437
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 92/284 (32%), Gaps = 14/284 (4%)
Query: 191 LNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+ D ++ +P+G R L + G + L+ + V+ +
Sbjct: 94 WAESSAGDARYIEVPRGTRREEPL-LVEANADAGEVRDTGILVREGAHATVAIVSHAAGA 152
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI-----------YNFVTKRG 299
H V+ A ++S N ++ + + G
Sbjct: 153 ASSAGSTHTETATTVSAARASRRHSA--NLVRIIAERNATVRIVEIIALGEDSTHLEGIG 210
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ I Q G LRG S + ++ G +++D +
Sbjct: 211 IEADGGASIEVRQYALGGGQVALGFEAQLRGRSSRLQLDLRYVARGHERLDVNQMVRQRG 270
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+T I S G+ A ++ T R + + GA S+ L+ G++ T+P I
Sbjct: 271 LDTRCDIQSTGVLADSAHKTLRETIDLVHGAKGSKGNEAETVLVTGDDVVNRTLPVILCD 330
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
H A+ +S E L Y RG+ E A+AL +
Sbjct: 331 EDDVAGNHGASIGSVSAEQLAYLRDRGLSEGEAVALFSRAIFDD 374
>gi|325849544|ref|ZP_08170782.1| SufB/sufD domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480025|gb|EGC83102.1| SufB/sufD domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 348
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 73/179 (40%)
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ G R+ + +E G+ ++ L GE+S E I +D G
Sbjct: 157 QISSIIGDRANFDISYIELGADKSYVNIRNFLDGEESNLEENGIYFKENDDFLDIGAFND 216
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H AK T S + G G + ++G V + RG H+ ++++ + + P +
Sbjct: 217 HKAKVTKSNCLFNGALKGKAEKRWKGVVDLKRGCEHADGKIGDYAVMLSPDAINRSAPVL 276
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
++ + EH A+ + + LFY + RG + A +L++ + K+ E E
Sbjct: 277 LNEEKDVSGEHAASVGRFDNAMLFYIMSRGFSKRKAESLMLEANFAPTIDKIDHEELRE 335
>gi|294102347|ref|YP_003554205.1| SufBD protein [Aminobacterium colombiense DSM 12261]
gi|293617327|gb|ADE57481.1| SufBD protein [Aminobacterium colombiense DSM 12261]
Length = 315
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/288 (17%), Positives = 106/288 (36%), Gaps = 10/288 (3%)
Query: 177 LSTVVPVGDNFYAALNSAVFTDG--SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLII 234
+ VV + + + DG + + + +G R + F K Q + I
Sbjct: 36 ANKVVDYHEVEGVHIEAYETEDGVRAVIEVEEGTRLTDPVHLCFGDVRKEGRQIIDSHIT 95
Query: 235 ADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNF 294
G++V +L C P E LHA + + A++ Y + P +
Sbjct: 96 VGRGAHVEFLAHCVFP-HAEKFLHAMKGVVEVGEGADVTYKELHFHGPKSQMEVRPVT-- 152
Query: 295 VTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTK 354
K + S + GS + GE S E S +
Sbjct: 153 EVKVEKGGRYANDFSLVEGRVGSLDIKIDIDAV--GEGSRVELTSKVYGKDDDTVKIQDV 210
Query: 355 MLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
+ +N+++ I ++ + S ++ G + A ++ C ++ G A P
Sbjct: 211 VKLSGRNSSALIKTRTVLKDRSVGSFLGM--IDGAAPGAKGHVDCTEVVQGE-AVADASP 267
Query: 415 YIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+++ + + HEA +I+D+ + + +G+ + AI +IV+G ++
Sbjct: 268 VVKASHPEAEVTHEAAIGRIADDKIAGLMAKGLSSDQAIDMIVSGLLK 315
>gi|210632887|ref|ZP_03297586.1| hypothetical protein COLSTE_01493 [Collinsella stercoris DSM 13279]
gi|210159355|gb|EEA90326.1| hypothetical protein COLSTE_01493 [Collinsella stercoris DSM 13279]
Length = 423
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 64/407 (15%), Positives = 133/407 (32%), Gaps = 28/407 (6%)
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
++ M P+W+ ++ ++D + + + +++ T
Sbjct: 9 KKASAMPAPTWSWLKMNSVDIE-------VPDGLERRCRVEIEAAESLTDNMKSFEGALA 61
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFK------EELKKSGVIFMPISEAICEHPDLVKKY 176
E+ A + ++ A A DS +VV + +L + + + E ++
Sbjct: 62 ELQARLDEARAAQGAAADSRAVVRAARGVDQGAADLDTPALSASERTAVLSEVAGDAQRD 121
Query: 177 LSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIAD 236
T V + Y + + KG + + E + ++A
Sbjct: 122 FETGVGINARSYLNF---LAGGSVVLATEKGAVEEASIRVTAQAGEASGASVD---VVAA 175
Query: 237 EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVT 296
S ++ E + + + A + + + V
Sbjct: 176 PDSALTLTVS-LDSDASEPAFTGSTLRVFAGARSRVDVTVY--------VTGSDAVTAVE 226
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
G ++++ + G + LRG++S + + ++ G Q D +
Sbjct: 227 DSGFVLDEGARVNVRHVVLGGRFAATGLAADLRGDRSRIDIDTSYLAGGSSQRDFNYVIR 286
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H K T S + + G+ G + RG + + GA + + LL TIP I
Sbjct: 287 HRGKKTVSNMDANGVLTGTTKKCLRGTIDLIHGAKGAEGNERETVLLASRGVDNKTIPTI 346
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
H AT + E LFY RG+ +E AL ++ + E
Sbjct: 347 LCDEDDVAGNHGATIGHVRPEQLFYAACRGLSQEQTEALFLSAKLEE 393
>gi|256827691|ref|YP_003151650.1| ABC-type transport system involved in Fe-S cluster assembly,
permease [Cryptobacterium curtum DSM 15641]
gi|256583834|gb|ACU94968.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Cryptobacterium curtum DSM 15641]
Length = 435
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 63/154 (40%)
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
++I + GS +W + L G ++ + + +G ++D ++ T
Sbjct: 240 REARIEMDETILGSDASWIGMAIDLAGAKATTGVDTHYLGHGMGKLDFNYLIVQRGTETE 299
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+ + G+ A S+ T RG + + RG + S Q L+ T+P I
Sbjct: 300 GLLSANGVLADESSKTLRGTIDLVRGCSGSVGREQETVLIASEGARNKTMPVILCHEDDV 359
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
+H AT ++ E L Y RG+ + A AL +
Sbjct: 360 QGDHGATIGHVNPEQLEYLQARGLSVKQAEALFI 393
>gi|2662402|gb|AAB88271.1| ORF470 [Plasmodium berghei]
Length = 237
Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 127/243 (52%), Gaps = 13/243 (5%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ K I YKY + I + GLN+++I+ +S ++ ++++ + +
Sbjct: 7 LKKFLNIYNLNYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNM 66
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P W+ P I +D++ YY++ L + +
Sbjct: 67 FKLPDWSCFECPNISYDNIIYYSSTLKDSNL-------------LVYLKTNLNINFLDTY 113
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+ +D + DS+SV+ T + LKK G+IF+ + + I ++P LVKKYL TVV DNF
Sbjct: 114 FNKKIIPIDVICDSISVLHTTQYFLKKLGIIFLSLLDVILKYPLLVKKYLGTVVSYKDNF 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC 247
+A +NS +F++GSF Y+ K ++C LSTYF+ N QFERTL+IA E +YV YLEGC
Sbjct: 174 FANINSIIFSEGSFCYVSKYIKCSFNLSTYFKTNSYDFAQFERTLLIASEFAYVGYLEGC 233
Query: 248 TAP 250
TA
Sbjct: 234 TAS 236
>gi|237845545|ref|XP_002372070.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
gi|211969734|gb|EEB04930.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
Length = 187
Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 111/177 (62%)
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
+S ++W Q+E GS ITWKYPS L G +S F+S+A+ + +Q D+GTKMLH+ KNT
Sbjct: 2 DKSFLNWIQIEIGSVITWKYPSTYLIGNKSFSNFFSLAMLSDYQVSDTGTKMLHIGKNTK 61
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S I+SK +S FS TYRG V++ + A +S N+T+C+SLLIG N TIPY N S
Sbjct: 62 SFILSKSLSFNFSFYTYRGLVTIFKTALNSYNYTECNSLLIGCNAFTATIPYTIINNFSA 121
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+ EAT SK+ + LF+ L RG+ ++ + +++ G+ + K+ E +E LI
Sbjct: 122 YINQEATISKLELDFLFFLLHRGLNLKSTLMILIYGYCYNICSKISFELELEVPLLI 178
>gi|139439172|ref|ZP_01772624.1| Hypothetical protein COLAER_01634 [Collinsella aerofaciens ATCC
25986]
gi|133775519|gb|EBA39339.1| Hypothetical protein COLAER_01634 [Collinsella aerofaciens ATCC
25986]
Length = 423
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 8/204 (3%)
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
+V+ + A + A + + Q + + G ++++ G+
Sbjct: 198 SVLRVCAYEYATVNVTCTQTLDD--------SWIALDDTGLFLDEGARVNVQHTVLGAGA 249
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
+ + L G+ + + + Q D ++ H + T I + G+ G S
Sbjct: 250 SATGLAGDLLGDTAKVTIDTDYLGAREQVHDFNYELRHRGRKTECEIDANGVLTGTSKKV 309
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
YRG + + G + + LL T+P I H AT + DE L
Sbjct: 310 YRGTIDLVHGCKGATGTERETVLLANKGVDNKTVPVILCDEDDVAGNHGATIGHVRDEQL 369
Query: 440 FYCLQRGIPEEAAIALIVNGFVRE 463
FY RG+ + AA L + + +
Sbjct: 370 FYLACRGLDQNAAEDLFIRAKLED 393
>gi|167746198|ref|ZP_02418325.1| hypothetical protein ANACAC_00900 [Anaerostipes caccae DSM 14662]
gi|317473251|ref|ZP_07932547.1| SufBD protein [Anaerostipes sp. 3_2_56FAA]
gi|167654191|gb|EDR98320.1| hypothetical protein ANACAC_00900 [Anaerostipes caccae DSM 14662]
gi|316899245|gb|EFV21263.1| SufBD protein [Anaerostipes sp. 3_2_56FAA]
Length = 307
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 98/253 (38%), Gaps = 15/253 (5%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ ++ G ++G+ V + GC DE H + +A +
Sbjct: 66 VHIPVVVSASGITDVVYNDFYIEDGADVLIVAGCGIHNDGDEESRHDGIHAFHVGSHANV 125
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
+Y + Y G + N VTK + TQ++ G T + + G
Sbjct: 126 RYE--ERHYGEGKGTGGRVLNPVTKIYVEEDSVFTLDTTQIK-GVDSTIRETHVEM-GAG 181
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
S +++G QQ S + + ++++I+S+ ++ S + H A
Sbjct: 182 SKLYVMEKLMTHGNQQAISNMDVQLNGEESSAQIISRSVAKDTSTQVF------HPKAIG 235
Query: 393 ---SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
QCDS+++ + +IP I + + + HEA +I+++ L G+
Sbjct: 236 NALCHAHVQCDSIIMDD-AKISSIPEINANHVDAQIIHEAAIGRINNDQLIKLRTFGMTG 294
Query: 450 EAAIALIVNGFVR 462
E A A+I+ F++
Sbjct: 295 EEAEAVIIEDFLK 307
>gi|222100195|ref|YP_002534763.1| FeS assembly protein SufD [Thermotoga neapolitana DSM 4359]
gi|221572585|gb|ACM23397.1| FeS assembly protein SufD [Thermotoga neapolitana DSM 4359]
Length = 370
Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 92/272 (33%), Gaps = 18/272 (6%)
Query: 197 TDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ 256
+ FV + + + + E L++ ++ + + + +
Sbjct: 101 SHRKFVLLGDTFFTDFRIYGDGKHLIRSEDGVENVLVVVEKEAEIHRIS-------KVRR 153
Query: 257 LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETG 316
V+ ++ NA +K+ V D G N +++S
Sbjct: 154 FRNTVMRILVKRNAALKFINV------DLSGGFTFDN----VFIVLEEGARLSMRDFRAF 203
Query: 317 SAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFS 376
Y + + S + S NG D M + R+ G+ G
Sbjct: 204 GHRKVGYVLVK-KSKLSETDMRSYFYQNGTGVTDLLYLMRFEGEEAEGRLKGNGVVDGSG 262
Query: 377 NNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
+RG + V RG+ + +L++ IP + + H A++S + +
Sbjct: 263 KIVFRGILDVKRGSKNIVAEEVEHTLILSPEARMDAIPSLWVDENDVTASHSASSSSLDE 322
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVREVLQKL 468
LFY + RGI E A LIV G ++L +L
Sbjct: 323 NQLFYIMSRGIDEAEAKRLIVRGIFSDLLDEL 354
>gi|213621113|ref|ZP_03373896.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
gi|289810174|ref|ZP_06540803.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 60
Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/60 (68%), Positives = 51/60 (85%)
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
TTS+I ++ LFYCLQRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 1 TTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 60
>gi|291522883|emb|CBK81176.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Coprococcus catus GD/7]
Length = 315
Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
Query: 233 IIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
++G+ V+ + GC H + NA +KY V+N Y + G I
Sbjct: 93 FYVEDGADVTIVAGCGIHGEGCSETRHDGIHTFHVGKNANVKY--VENHYAEGNGTGGKI 150
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
N VTK G S + + + K + + G + +++ Q S
Sbjct: 151 LNPVTKIYV--GENSVFTLETTQIKGVDSTKRETFVELGPNAKLYVTEKLMTHDAQHAIS 208
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
++ + +++RI+S+ ++ G SN + K + A H QCDS+++ +
Sbjct: 209 NMEVKLNGEGSSARIISRSVAKGTSNQIFHPKA-IGNNACH--AHVQCDSIIM-DKASIS 264
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
+IP I + + + HEA +I+DE L G+
Sbjct: 265 SIPEINANHIDAQIIHEAAIGRINDEQLIKLRTFGMS 301
>gi|154249172|ref|YP_001409997.1| SufBD protein [Fervidobacterium nodosum Rt17-B1]
gi|154153108|gb|ABS60340.1| SufBD protein [Fervidobacterium nodosum Rt17-B1]
Length = 315
Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 10/259 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I + P + EK Q II + + V + C PQ E+ H AV
Sbjct: 63 MEIEENTEVPFPIHVCTGYIEKKGYQKVLFNIIVRKNAKVKFTAHCVFPQ-AEDFTHEAV 121
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+V + A ++Y G T + T + +
Sbjct: 122 SNVVVEEGAIMEY------NDEHYHSDLGTITLKTTTNAKVEKGGVYKNSFHLTKTRVGK 175
Query: 322 KYPSCLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
L E + GE S ++ +++ + + SR ++K + G
Sbjct: 176 LNVLMNLELKENAVGELVSKVRASSNDEVNINEIVYLNGE--HSRGLAKTVVVGLDEAKV 233
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
+ A +S+ C+ + G T P ++ N L HEA+ ++S + L
Sbjct: 234 NVLNEAYGNAPYSKAHISCEEITKGEKVTVSTTPVLKITNDLAELTHEASIGRVSQKQLE 293
Query: 441 YCLQRGIPEEAAIALIVNG 459
+ +G+ EE A LI+ G
Sbjct: 294 TLMAKGLTEEEATELIIKG 312
>gi|167759966|ref|ZP_02432093.1| hypothetical protein CLOSCI_02331 [Clostridium scindens ATCC 35704]
gi|167662585|gb|EDS06715.1| hypothetical protein CLOSCI_02331 [Clostridium scindens ATCC 35704]
Length = 308
Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 97/252 (38%), Gaps = 9/252 (3%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNA 270
++ ++ G D G+ V+ + GC N+ H + A
Sbjct: 65 EQVHIPVVVDASGMKDEVYNDFYIDAGADVTIIAGCGIHNSGCNESRHDGIHSFHVGKGA 124
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++Y + Y + N VTK + + ++ + + + G
Sbjct: 125 NVRYE--EKHYGEGEGTGARVLNPVTK--IYMKEDAVFTLDTVQIKGVDSTVRETEVEMG 180
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
S +++ Q +S ++ ++++I+S+ ++ G S + K G
Sbjct: 181 ANSKLFVIEKLMTHDSQNAESNMEIQMNGDGSSAQIISRSVAKGQSRQVFHPKAV---GN 237
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
A QCDS+++ ++ +IP I +++ + HEA +I+DE L G+ E
Sbjct: 238 AKCHAHVQCDSIIM-DHAEVASIPEINARHLDAAIIHEAAIGRINDEQLVKLRTLGMTAE 296
Query: 451 AAIALIVNGFVR 462
A +I++ F+
Sbjct: 297 EAEGIIIDNFLN 308
>gi|227485562|ref|ZP_03915878.1| iron-regulated ABC superfamily ATP binding cassette transporter,
membrane protein (SufB) [Anaerococcus lactolyticus ATCC
51172]
gi|227236428|gb|EEI86443.1| iron-regulated ABC superfamily ATP binding cassette transporter,
membrane protein (SufB) [Anaerococcus lactolyticus ATCC
51172]
Length = 347
Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 73/169 (43%)
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
R+++ T +E G+ + +LRGE++ + + + +D T H NT
Sbjct: 162 ADRAELDVTYIEIGATKSMVNIRNILRGEEAKVVENGVYFKSKEEYLDILTVNKHYGINT 221
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S + G + ++G V + RG + S+++ + + P + ++
Sbjct: 222 DSNTLFNGALKDKAVKNFKGIVDLRRGCTKADGKIGDYSMMLSDEVVNKSAPVLLNEEKE 281
Query: 423 CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+H A+ +++ E LFY + RG ++ A ++++ L K+ E
Sbjct: 282 VTGKHAASVGRMNKEMLFYIMSRGFSKKQAESMMLEANFAPALDKIEDE 330
>gi|212697000|ref|ZP_03305128.1| hypothetical protein ANHYDRO_01565 [Anaerococcus hydrogenalis DSM
7454]
gi|212675998|gb|EEB35605.1| hypothetical protein ANHYDRO_01565 [Anaerococcus hydrogenalis DSM
7454]
Length = 348
Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 72/179 (40%)
Query: 297 KRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKML 356
+ G R+ + +E G+ ++ L GE+S E I +D G
Sbjct: 157 QISSIIGDRANFDISYIELGADKSYVNIRNFLDGEESNLEENGIYFKENDDFLDIGAFND 216
Query: 357 HLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYI 416
H AK T S + G G + ++G V + RG H+ ++++ + + P +
Sbjct: 217 HKAKVTKSNCLFNGALKGKAEKRWKGVVDLKRGCEHADGKIGDYAVMLSPDAINRSAPVL 276
Query: 417 ESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE 475
++ + EH A+ + LFY + RG + A +L++ + K+ + E
Sbjct: 277 LNEEKDVSGEHAASVGRFDKAMLFYIMSRGFSKRKAESLMLEANFAPTIDKIDHDELRE 335
>gi|325681348|ref|ZP_08160874.1| SufB/sufD domain protein [Ruminococcus albus 8]
gi|324106838|gb|EGC01128.1| SufB/sufD domain protein [Ruminococcus albus 8]
Length = 308
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 96/253 (37%), Gaps = 9/253 (3%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDN 269
+ ++E G + E V + GC ++ H + N
Sbjct: 64 NESVHIPVVLSESGLKETVYNDFYVGENCDVLIVAGCGIDNCGTQDSEHDGIHRFFVGKN 123
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
++++Y V+ Y + + N VT+ + Q++ K L+
Sbjct: 124 SKVRY--VEKHYGSGNGTGKRVLNPVTEVYQEENSVVDMEMVQIKGVDNTDRKTI-AELK 180
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ +++G QQ S + +++ +VS+ ++ +Y+ G
Sbjct: 181 A-GAKLNVRERLMTHGEQQAFSTYSVSLNGDGSSADVVSRSVARDN---SYQKLDLCVNG 236
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPE 449
A T+CDS+++ + +P +E+ + L HEA KI+ E L + G+ E
Sbjct: 237 NAACSGHTECDSIIMDSG-RILAVPSLEANSVDAALVHEAAIGKIAGEQLIKLMTLGLTE 295
Query: 450 EAAIALIVNGFVR 462
A I+NGF++
Sbjct: 296 AEAEEQIINGFLK 308
>gi|257784205|ref|YP_003179422.1| SufBD protein [Atopobium parvulum DSM 20469]
gi|257472712|gb|ACV50831.1| SufBD protein [Atopobium parvulum DSM 20469]
Length = 379
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 95/286 (33%), Gaps = 22/286 (7%)
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA- 259
F +P + + +K II EG+ + A ++ +
Sbjct: 70 FYNVPAHTKREEPIVVAVSAAQKQCANTG---IIVREGAEAIVVIAAFAGEKSTDAASNN 126
Query: 260 ------AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL 313
A+ +V A++ + + G + + Q
Sbjct: 127 ALPTSAALTRIVVEAGAKLHLIEMLGVNEDQQHLES--------VGLEIHQDATVDVKQY 178
Query: 314 ETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISA 373
G + + L G ++ + + + + +D + +T +++ G+
Sbjct: 179 ALGGSTIGLGLTANLVGARARLDLNNRYHATHKETLDINHLVRMRGTSTRAQLTESGVLN 238
Query: 374 GFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
+ T R + + RGA ++ +++G++ T+P I H AT
Sbjct: 239 EAAKKTLRATIDLVRGAKDAQGNEIETVMILGDDVVNKTMPVILCDEDDVAGNHGATIGS 298
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVREVL----QKLPMEFAVE 475
+S + L Y RG+ +AA L V + + +++ AVE
Sbjct: 299 VSPDQLDYLAARGLSRQAAEQLFVRALFEDAIINAPEEISHRVAVE 344
>gi|227501078|ref|ZP_03931127.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Anaerococcus tetradius ATCC 35098]
gi|227216851|gb|EEI82249.1| iron-regulated ABC superfamily ATP binding cassette transporter
membrane protein [Anaerococcus tetradius ATCC 35098]
Length = 351
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 87/239 (36%), Gaps = 9/239 (3%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
I A E S S+L R ++ + + N+ +K V N +
Sbjct: 103 INAQEESQSSFLVSIFD-DRSDHIFLNSRIRAKLHANSYVKLVVVTNMSEKATN------ 155
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ G + + T +E G+ + +L+G +S I G +D
Sbjct: 156 --LNSIGTYLEEGAVLDITYIEVGAGKSLVNIDNILKGAKSKVIQKGIYFKQGKDFLDLL 213
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
H T S + G + ++G V + RG + S+++ + +
Sbjct: 214 ATNEHFGNETDSECMFNGALKDKAEKNFKGIVDLRRGCTKADGKIGDYSMMLSDEVINKS 273
Query: 413 IPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
P + ++ +H A+ +++ LFY + RG ++ A A+++ + ++ E
Sbjct: 274 APILLNEEREVAGKHAASVGRLNKGMLFYIMSRGFSKKQAEAMMLEANFAPAIDEIEDE 332
>gi|293400820|ref|ZP_06644965.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305846|gb|EFE47090.1| putative SufB/sufD domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 271
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 7/193 (3%)
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+ + ++ E + L + S I+ Q D K H
Sbjct: 82 QQAVLHKDAILTIAYWEIEDGASQIRLDVQLMESGAQVMVRSACIAKE--QKDFYVKCHH 139
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+T S++ I N + +GA S + L + ++ + +P +
Sbjct: 140 EVAHTKSQMEHYAIVEDEGNYRMEAIGKIVKGAHASESHQTTRVLTLSDHHNSEVVPVLY 199
Query: 418 SKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME-FAVEA 476
+ H T + + L+Y RG+ A+ L+ G++ + + E
Sbjct: 200 IDENDVKASHATTLGQPDENQLYYLQSRGLSRSQALGLLTVGYLMPISDLFDDATYHDEM 259
Query: 477 QKLIDISLEGSVG 489
+ +E VG
Sbjct: 260 KN----EIEKRVG 268
>gi|146304419|ref|YP_001191735.1| SufBD protein [Metallosphaera sedula DSM 5348]
gi|145702669|gb|ABP95811.1| SufBD protein [Metallosphaera sedula DSM 5348]
Length = 378
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ +I+ + G ++ L E + F + ++ G +++ + H+ + + S
Sbjct: 200 KGEINSSIFSVGQSLGHTEYHVELSDE-AVANFNAKSLGIGNNRVNVLANVNHVGRKSVS 258
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC- 423
V K +++G S RG + A S +L+IG++ A P +E K
Sbjct: 259 NGVLKAVASGSSYTVIRGDAVIGENAIDSSTTILGRALIIGDDAKAVVAPMLEVKTGKII 318
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV-----REVLQKL 468
+H A+ SK++++ +FY RG+ ++ A LI+ GF+ ++++KL
Sbjct: 319 TAKHSASASKVNEDLIFYLENRGLDKKCAEGLIIRGFLTDDNDNDIIRKL 368
>gi|18977657|ref|NP_579014.1| hypothetical protein PF1285 [Pyrococcus furiosus DSM 3638]
gi|6066240|gb|AAF03225.1|AF156097_5 ORF5 [Pyrococcus furiosus]
gi|18893383|gb|AAL81409.1| hypothetical protein PF1285 [Pyrococcus furiosus DSM 3638]
Length = 363
Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 80/231 (34%), Gaps = 3/231 (1%)
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL-VALDNAEIKYSTVQNWYPGDSQGKG 289
LII S +++ + + ++ + ++ + + ++
Sbjct: 106 PLIIVSHLSEKAFVSHHLSIEIEKASAPIILYDISEKGTKSLVVELAIREGSSEILTIGN 165
Query: 290 GIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQI 349
S + + G ++ L G++S + +
Sbjct: 166 HSSLSHFLLRAILDRNSTLKTFTIIKGGTMSHHREDYSLEGKESKLVLAGL-PVGIGSAV 224
Query: 350 DSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCG 409
D T ++H K++ S+I G S +RG + A + + +++
Sbjct: 225 DYITNIVHYGKSSKSKIRVHGFSYKNGWVVHRGTSKISEEAEGASSEVSSHVIIMDRGSL 284
Query: 410 AHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
++P +E H ++ ++I +E LFY RG+ E A+ L++ G
Sbjct: 285 GVSVPMLEVDTGDIENASHSSSVTQIDEEALFYLRSRGLNREEALRLLIYG 335
>gi|310826254|ref|YP_003958611.1| sufB/sufD domain protein [Eubacterium limosum KIST612]
gi|308737988|gb|ADO35648.1| sufB/sufD domain protein [Eubacterium limosum KIST612]
Length = 311
Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 82/233 (35%), Gaps = 13/233 (5%)
Query: 233 IIADEGSYVSYLEGCTAPQRDEN-QLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
E + V+ + GC + H + +++ Y ++ +
Sbjct: 89 FYIGEDADVTIVAGCGVSTDGCDGSEHNGIHRFFLKPGSKVLY--IEKHIGVGEGTGKRV 146
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
N T + S + + + K S GE + +++G Q ++
Sbjct: 147 INPET--YIEQEAGSYMEMNTTQIKGVDSTKRKSAAKLGEGAKLVIKEKLMTHGDQYAET 204
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
++ ++ + S+ ++ S + ++ G ++CD++++ +
Sbjct: 205 AFEVDMDGAGSSCTLSSRSVARDRSRQLF--LSKIN-GNNQCAGHSECDAIIMDEGVVS- 260
Query: 412 TIPYIESKNSSCNLE--HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
IP E + E HEA KI+ + + G+ E A I+ GF++
Sbjct: 261 AIP--EITANDLEAELIHEAAIGKIAGDQIIKLRTLGLTEHEAEQHIIEGFLK 311
>gi|170289248|ref|YP_001739486.1| FeS assembly protein SufD [Thermotoga sp. RQ2]
gi|281412850|ref|YP_003346929.1| FeS assembly protein SufD [Thermotoga naphthophila RKU-10]
gi|170176751|gb|ACB09803.1| FeS assembly protein SufD [Thermotoga sp. RQ2]
gi|281373953|gb|ADA67515.1| FeS assembly protein SufD [Thermotoga naphthophila RKU-10]
Length = 368
Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 93/255 (36%), Gaps = 18/255 (7%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
E L++ ++ + + ++ V+ ++ NA +K+ N +
Sbjct: 130 IENVLVVVEKEAEI-------YKLSSTDRFRNTVMRILVKKNASLKFF---NLDFFGNFS 179
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
++ +++ + + L + S + S NG
Sbjct: 180 FDNVF-------IVLEEGARLVLRDFKAFGYRKTGHILVKLN-KSSKADMKSFFYQNGSG 231
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D M ++ ++ G+ G +RG + V RG+ + +L++ N
Sbjct: 232 ITDLLYLMRFEGEDAEGKLKGNGVVDGAGKIVFRGILDVKRGSKNIVAEETEHTLILSPN 291
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
IP + + H A++S + ++ LFY + RG+ E A LIV G E+L +
Sbjct: 292 ARMDAIPSLWVDENDVTASHSASSSSLDEDELFYLMTRGVDEIEAKKLIVRGVFNELLDE 351
Query: 468 LPMEFAVEAQKLIDI 482
L E + +++
Sbjct: 352 LDESLKGEVENVVNR 366
>gi|21228156|ref|NP_634078.1| ABC transporter ATP-binding protein [Methanosarcina mazei Go1]
gi|20906603|gb|AAM31750.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
Length = 320
Score = 110 bits (276), Expect = 4e-22, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 96/260 (36%), Gaps = 11/260 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
I KG + P+ + F + K Q + +A+E S V + CT P E +H E
Sbjct: 71 IKKGYKIPLPVHLCFGLVPKDGLQEIKMDFVAEEESAVELIAHCTFPN-AEKVIHKMDAE 129
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
++ NA +KY+ P GGI S + L + +
Sbjct: 130 MIIGKNAALKYTETHFHGP-----HGGIQVLPKAHITIEEGGSYYTNFSL-VSGRVGYLE 183
Query: 324 PSCLLRGEQSC-GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
+ E+ E + +I ++ +N S I S+ + + +RG
Sbjct: 184 FDYSVDAEKDSICEMVTKVYGKADDKIKVLERISLNGENARSVIKSRIAITDNAESVFRG 243
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
A +R C ++ GN A +P + N + HEA + + +
Sbjct: 244 IT--EGHAPRARGHVDCMEVIQGN-AKAEAVPIVRVDNPLAKVTHEAAIGCVDKKEVETL 300
Query: 443 LQRGIPEEAAIALIVNGFVR 462
+ RG+ E+ AI +IV G +
Sbjct: 301 MARGLEEDDAIDIIVKGMLA 320
>gi|332797000|ref|YP_004458500.1| FeS assembly protein SufD [Acidianus hospitalis W1]
gi|332694735|gb|AEE94202.1| FeS assembly protein SufD [Acidianus hospitalis W1]
Length = 382
Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats.
Identities = 55/300 (18%), Positives = 108/300 (36%), Gaps = 29/300 (9%)
Query: 178 STVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADE 237
++++ D+ +L ++ K + C ++ E I +
Sbjct: 99 NSLIKPEDHKLVSLTLSLSRKLEIKQGGKYLIC------HYTDVEGNFSPIN----IEIK 148
Query: 238 GSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTK 297
+ + +++AV+ N+ + + V YNFV
Sbjct: 149 VPEGESADVIYYSENKGKSMNSAVISASVSKNSSLNLTLV--------NKGNLSYNFVYS 200
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLH 357
+ G + + + + L E + F S A+ ID T + H
Sbjct: 201 KARVEGSINTYIISSGFSEGHV---EYHSYL-EEGAQAFFSSRALGVENNNIDVITNVYH 256
Query: 358 LAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIE 417
+ S K +SAG S RG ++ A S ++++G A P +E
Sbjct: 257 DGPKSVSNGFMKSVSAGSSFVVTRGDARINEQAIDSSTSIIGKAIMLGE-STAVVAPMLE 315
Query: 418 SKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR-----EVLQKLPME 471
+ +H A+ SK+ ++ +FY RG +++A LI+ GF+ E+++KL E
Sbjct: 316 VRTGRVITAKHSASVSKVPEDLIFYLQNRGFDKKSAEGLIIRGFMEEEGDTEIVKKLIDE 375
>gi|169335032|ref|ZP_02862225.1| hypothetical protein ANASTE_01438 [Anaerofustis stercorihominis DSM
17244]
gi|169257770|gb|EDS71736.1| hypothetical protein ANASTE_01438 [Anaerofustis stercorihominis DSM
17244]
Length = 305
Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 97/265 (36%), Gaps = 10/265 (3%)
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRD-ENQL 257
G ++I + + + E + V+ + GC D +
Sbjct: 50 GLVIHIKPNTKDEK-VYIPACVTHGAVDDLVYNDFYVGENADVTIVAGCGVHTDDGHDAR 108
Query: 258 HAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS 317
H + +NA + Y + GG+ + + ++
Sbjct: 109 HNGIHRFFLEENAHVLY----EEKHIATGKGGGLKRIDPVTDVNLKKGAVLEMDTIQLEG 164
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ + + E + +++G ++ + ++ +N+ ++S+ ++ G S
Sbjct: 165 VDSSIRKTSGVLEEGAKLLVRERIMTDGEEKARTDFDVVLKGENSKVDLISRSVAKGNSY 224
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
+ K+ G + ++CD++L+ N + + P + + + L HEA KI+ E
Sbjct: 225 QEFNSKI---NGETKCKGHSECDAILVDNGSVSAS-PSLIASDIDAELIHEAAIGKIAGE 280
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVR 462
+ G+ +E A I++GF++
Sbjct: 281 QILKLQSLGLTKEEAEQKIISGFLK 305
>gi|317488326|ref|ZP_07946888.1| hypothetical protein HMPREF1023_00586 [Eggerthella sp. 1_3_56FAA]
gi|325830862|ref|ZP_08164246.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
gi|316912580|gb|EFV34127.1| hypothetical protein HMPREF1023_00586 [Eggerthella sp. 1_3_56FAA]
gi|325487269|gb|EGC89712.1| SufB/sufD domain protein [Eggerthella sp. HGA1]
Length = 309
Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 87/236 (36%), Gaps = 9/236 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ + + G ++ V+ + GC + H + N+ +
Sbjct: 68 VYIPVIVTQAGLKDVVYNTFYIEDDCDVTIIAGCGIHNESHQASEHDGIHTFYCGKNSRV 127
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y + I N VT ++ TQL S+ + L G
Sbjct: 128 KY--VEKHYGEGTGTGERILNPVTNVIMDENSSCEMELTQLRGVSSTVR-DTNAEL-GAG 183
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++ Q S K+ +++ +++S+ ++ S + V G A
Sbjct: 184 AKLVLTEKLLTHDDQVATSNMKVELKGDDSSVQVISRSVAQDNSKQIFNPLVI---GEAQ 240
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
R QCD++L+G IP IE+ + L HEA KI+ + + + G+
Sbjct: 241 CRGHVQCDAILMG-TAKVTAIPGIEAAHEDALLVHEAAIGKIAGDQITKLMTLGLT 295
>gi|257790968|ref|YP_003181574.1| SufBD protein [Eggerthella lenta DSM 2243]
gi|257474865|gb|ACV55185.1| SufBD protein [Eggerthella lenta DSM 2243]
Length = 309
Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 87/236 (36%), Gaps = 9/236 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEI 272
+ + + G ++ V+ + GC + H + N+ +
Sbjct: 68 VYIPVIVTQSGLKDVVYNTFYIEDDCDVTIIAGCGIHNESHQASEHDGIHTFYCGKNSHV 127
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KY V+ Y + I N VT ++ TQL S+ + L G
Sbjct: 128 KY--VEKHYGEGTGTGERILNPVTNVIMDENSSCEMELTQLRGVSSTVR-DTNAEL-GAG 183
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++ Q S K+ +++ +++S+ ++ S + V G A
Sbjct: 184 AKLVLTEKLLTHDDQVATSNMKVELKGDDSSVQVISRSVAQDNSKQIFNPLVI---GEAQ 240
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
R QCD++L+G IP IE+ + L HEA KI+ + + + G+
Sbjct: 241 CRGHVQCDAILMG-TAKVTAIPGIEAAHEDALLVHEAAIGKIAGDQITKLMTLGLT 295
>gi|167768997|ref|ZP_02441050.1| hypothetical protein ANACOL_00318 [Anaerotruncus colihominis DSM
17241]
gi|167668637|gb|EDS12767.1| hypothetical protein ANACOL_00318 [Anaerotruncus colihominis DSM
17241]
Length = 305
Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 97/250 (38%), Gaps = 9/250 (3%)
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGC-TAPQRDENQLHAAVVELVALDNAEI 272
+ I G +G+ V+ + GC +E H + A +
Sbjct: 64 VYIPACITHAGVNDLVYNDFYIGDGADVTIVAGCGVHSDGEEEARHNGIHRFFIGKGAHV 123
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
Y ++ I N T+ G K+ TQ+ + K + G +
Sbjct: 124 LY--LEKHVGTGDGTGKRIINPQTQVQIAEGGYMKMDTTQI--KGVDSTKRVTTASLGPR 179
Query: 333 SCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAH 392
+ +++G Q +S + ++ +VS+ ++ G S+ +R ++ G
Sbjct: 180 ARLVIREKLMTHGVQMAESDFTVDLDGEDAGVDLVSRSVARGQSHQVFRSRI---NGNTR 236
Query: 393 SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAA 452
++CD++++ + IP + + N +L HEA KI+ E L + G+ EE A
Sbjct: 237 CTGHSECDAIIMDEGVVS-AIPELTAANIDASLIHEAAIGKIAGEQLVKLMTLGLTEEEA 295
Query: 453 IALIVNGFVR 462
A I+ GF++
Sbjct: 296 EAKIIEGFLK 305
>gi|20089814|ref|NP_615889.1| hypothetical protein MA0936 [Methanosarcina acetivorans C2A]
gi|19914758|gb|AAM04369.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 320
Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 94/260 (36%), Gaps = 11/260 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
I KG + P+ + F + K Q + +A+E S V + CT P E +H E
Sbjct: 71 IKKGYKIPLPVHLCFGLVPKDGLQEIKMDFVAEEDSAVELIAHCTFPN-AEKVIHKMDAE 129
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
++ NA +KY+ G G + K + + +
Sbjct: 130 MLIGKNASLKYT------ETHFHGPHGGIQVLPKAHIMIEEGGRYYTNFSLISGRVGYLE 183
Query: 324 PSCLLRGEQSC-GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
+ E+ E + +I ++ +N S I S+ + + +RG
Sbjct: 184 FDYSVDAEKDSICEMVTKVYGKADDKIKILERIALNGENARSVIKSRIAITDNAESVFRG 243
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
A +R C ++ G+ A +P + N + HEA + + +
Sbjct: 244 IT--EGHAPRARGHVDCMEVIQGD-AKAEAVPIVRVDNPLAKVTHEAAIGCVDKKEVETL 300
Query: 443 LQRGIPEEAAIALIVNGFVR 462
+ RG+ E+ AI +IV G +
Sbjct: 301 MARGLEEDDAIDIIVKGMLA 320
>gi|15897813|ref|NP_342418.1| hypothetical protein SSO0928 [Sulfolobus solfataricus P2]
gi|284175616|ref|ZP_06389585.1| hypothetical protein Ssol98_13310 [Sulfolobus solfataricus 98/2]
gi|13814110|gb|AAK41208.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
Length = 389
Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 96/281 (34%), Gaps = 14/281 (4%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ ++ + + + + E +N+ +I +
Sbjct: 102 NDSIISSDEHKLVSLAYSLSRRITINNEGEYYVKHVLNKDKYFSPSHLIINVPNDKQIKV 161
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+ E+ L ++ + DN+ + + V
Sbjct: 162 V--YEVLNLSESSLITPIISVNIEDNSSLDFQFVNFSSDNSLLFS----------YIKAN 209
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
++ + + G+ + S L E S EF S A +ID ++HL + +
Sbjct: 210 IKGTMHSSIFVNGNKMGHVQFSTRLE-ESSVSEFSSRAFGTHSNKIDVVNNVIHLGQKSV 268
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S K IS + RG ++ A +S SL++G + A P +E K
Sbjct: 269 SNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLGKDAKAVVSPMLEVKTGRV 328
Query: 424 NLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H A SKI + +FY RG+ A +I+ GF+ E
Sbjct: 329 VMAKHSAAVSKIDENQIFYLQTRGLSRREAEGIIIRGFIIE 369
>gi|261602516|gb|ACX92119.1| FeS assembly protein SufD [Sulfolobus solfataricus 98/2]
Length = 384
Score = 109 bits (273), Expect = 9e-22, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 96/281 (34%), Gaps = 14/281 (4%)
Query: 184 GDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSY 243
D+ ++ + + + + E +N+ +I +
Sbjct: 97 NDSIISSDEHKLVSLAYSLSRRITINNEGEYYVKHVLNKDKYFSPSHLIINVPNDKQIKV 156
Query: 244 LEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRG 303
+ E+ L ++ + DN+ + + V
Sbjct: 157 V--YEVLNLSESSLITPIISVNIEDNSSLDFQFVNFSSDNSLLFS----------YIKAN 204
Query: 304 MRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTT 363
++ + + G+ + S L E S EF S A +ID ++HL + +
Sbjct: 205 IKGTMHSSIFVNGNKMGHVQFSTRLE-ESSVSEFSSRAFGTHSNKIDVVNNVIHLGQKSV 263
Query: 364 SRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
S K IS + RG ++ A +S SL++G + A P +E K
Sbjct: 264 SNGFMKAISNDQAFTVVRGVATIDETAINSSTSIIGRSLVLGKDAKAVVSPMLEVKTGRV 323
Query: 424 NLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ H A SKI + +FY RG+ A +I+ GF+ E
Sbjct: 324 VMAKHSAAVSKIDENQIFYLQTRGLSRREAEGIIIRGFIIE 364
>gi|159042394|ref|YP_001541646.1| SufBD protein [Caldivirga maquilingensis IC-167]
gi|157921229|gb|ABW02656.1| SufBD protein [Caldivirga maquilingensis IC-167]
Length = 375
Score = 109 bits (273), Expect = 9e-22, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 91/296 (30%), Gaps = 19/296 (6%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
+ V D + + + F + ++ +I
Sbjct: 73 ELTSDNAVTGIDPSESRIIARHFVNIREIHSLTLSESSSVRVMMSYSGGGSEMHSNHVII 132
Query: 234 IADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYN 293
+ + + + EL D A + +
Sbjct: 133 NVNNDALANVFLSIIGNGGCGTN----ITELNVGDGAVVNLLIY----------SVNVDP 178
Query: 294 FVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGT 353
G R+K++ + +T +L+G +S S+ + G +ID
Sbjct: 179 AFNLIRINEGARAKVNSYSIVVNGKMTHHREDYVLQGRESMVNVNSLEVGLGSSRIDYMV 238
Query: 354 KMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTI 413
++H + ++S ++K I+ + +RG + S + + +N ++
Sbjct: 239 NLMHYGEGSSSNSITKAIALDSATVIHRGFGRISDHGKWSYTNIEGKVFIGSSNAVGMSV 298
Query: 414 PYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALI----VNGFVREV 464
P I N H A+ + + +E Y RG+ E AI LI + F+ +
Sbjct: 299 PVIMVDTGDVNGARHAASDAALDEEQELYLRMRGLSREEAIRLITYDMIMSFLDNI 354
>gi|73670897|ref|YP_306912.1| ABC transporter ATP-binding protein [Methanosarcina barkeri str.
Fusaro]
gi|72398059|gb|AAZ72332.1| ABC transporter, ATP-binding protein [Methanosarcina barkeri str.
Fusaro]
Length = 320
Score = 109 bits (273), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 89/260 (34%), Gaps = 11/260 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
I KG + P+ + F + + Q IA+E S V + CT P +H +
Sbjct: 71 IKKGYKIPLPVHLCFGLIHEDGLQEINMNFIAEEDSAVELVAHCTFPN-AVKIIHRMDAQ 129
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NA +KY+ G G + K + +
Sbjct: 130 MHVGKNASLKYT------ETHFHGPHGGIQVIPKSHIRIEEGGSYYTNFSLVSGRVGYLE 183
Query: 324 PSCLLRGEQSC-GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
+ E+ E + +I K+ +N S I S+ + + +RG
Sbjct: 184 FDYDVEAEKDSVCEMVTKVYGKKDDKIKILEKVSLNGENARSVIKSRLAITEDAESEFRG 243
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
A SR C +L GN A +P + N + HEA + + +
Sbjct: 244 IT--EGHAPRSRGHVDCMEVLQGN-AKAEAVPIVRVDNPLAKVTHEAAIGCVDKKEVETL 300
Query: 443 LQRGIPEEAAIALIVNGFVR 462
+ RG+ E+ AI IV G +
Sbjct: 301 MARGLEEDDAIDTIVKGMLA 320
>gi|312880291|ref|ZP_07740091.1| SufBD protein [Aminomonas paucivorans DSM 12260]
gi|310783582|gb|EFQ23980.1| SufBD protein [Aminomonas paucivorans DSM 12260]
Length = 316
Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 90/264 (34%), Gaps = 10/264 (3%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ + + +GV + F Q T I + + C P LHA
Sbjct: 62 AVITLDEGVVVEKPVHLCFGHLGTEGRQTIETHIRLGARARAVFQAHCVFPN-AVEFLHA 120
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI-SWTQLETGSA 318
++ + A Y+ V P G I + R S + +T +E
Sbjct: 121 MEGDIELGEGACFTYNEVHVHGPE-----GKITVRPSTRVRLDHGASYLGDFTLVEGRVG 175
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
G +S E S Q + +T+ I ++ + +
Sbjct: 176 DLSIDIDVEAAGSKSRVEITSKVYGKYDDQCRVQDVVRLTGAESTALIKARVVLKDQARG 235
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+ G + A +R C ++ G A P + + +S + HEA +I+D+
Sbjct: 236 VFLGT--IDGAAPGARGHVDCTEIVQGE-AVAEASPVVRASHSEAEITHEAAIGRIADDK 292
Query: 439 LFYCLQRGIPEEAAIALIVNGFVR 462
+ + +G+ E+ A+ IV G +R
Sbjct: 293 IAGLMAKGLSEDQAVDAIVAGLLR 316
>gi|269792408|ref|YP_003317312.1| SufBD protein [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100043|gb|ACZ19030.1| SufBD protein [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 314
Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 98/265 (36%), Gaps = 12/265 (4%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ + + +GV+ + F + Q T I GS +L C P E LH
Sbjct: 60 ALITVQEGVKLAKPVHICFGHLGREGRQTIDTKIRMRRGSQAVFLAHCVFPN-AEEFLHQ 118
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI--SWTQLETGS 317
E+ + + + Y+ V G G+ K ++ +T +E
Sbjct: 119 MEGEIHLEEGSSLTYNEVH------VHGPEGMIVVRPKTNVVLEDKAIYRGDFTLVEGRV 172
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+G S E S + + +++T+ + ++ + S
Sbjct: 173 GDLSIDIYVDAKGVGSSVEITSKVYGKMDDRCLVQDVVKLSGRDSTALVKARVVLKDRST 232
Query: 378 NTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
T+ G + A +R C ++ G A P + + ++ + HEA +I+D+
Sbjct: 233 GTFYGT--IDGAAPGARGHVDCTEIVQGE-AVAEASPVVRASHAEAEITHEAAIGRIADD 289
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVR 462
+ + +G+ E+ A+ IV+G ++
Sbjct: 290 KIAGLMAKGLTEDEAVDFIVSGLLK 314
>gi|254169188|ref|ZP_04876023.1| hypothetical protein ABOONEI_838 [Aciduliprofundum boonei T469]
gi|197621846|gb|EDY34426.1| hypothetical protein ABOONEI_838 [Aciduliprofundum boonei T469]
Length = 316
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 101/262 (38%), Gaps = 11/262 (4%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I KG + + F + + Q+ +T I+A+E S V +L C P H
Sbjct: 65 IRIKKGYKSKNPVHLCFGMLPREGKQYIKTEIVAEEDSEVKFLVHCIFPN-AVKVEHIMD 123
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
++ + A+++Y V GK G + K G + + + +
Sbjct: 124 ANVIVENRAKVEYEEVH------FHGKLGGVKVIPKTRAIVGKGGAYNSSFVIKTGRAGF 177
Query: 322 KYPSC-LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ GE + + + I + ++ +++ I ++ + +
Sbjct: 178 VDIDYEVHIGENAKSMLLTKIYAREDDLIKANESVILEGAHSSGVIKTRMALRDKAKSEV 237
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
GK V G+ SR C +++ + A P + +KN + HEA + + L
Sbjct: 238 IGKT-VGLGSY-SRGHVDCTEIIMDD-AEAIASPVVIAKNPKAKVTHEAAIGSVDKKQLL 294
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
+ RG+ EE AI +IV G ++
Sbjct: 295 TLMARGLTEEEAIDVIVGGLLK 316
>gi|167563450|ref|ZP_02356366.1| sufD domain protein [Burkholderia oklahomensis EO147]
Length = 396
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 99/281 (35%), Gaps = 12/281 (4%)
Query: 183 VGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
GD+ + A+ G + I G R+ + + +I G++
Sbjct: 82 PGDDAAPFFWAHRALCEAGLRLRIGSGPTRRAPAMLQLRLQPHASVEAPLVVIDVQPGAH 141
Query: 241 VSYLE--GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+E G R + A +++ + I + V R
Sbjct: 142 CVLIESHGHDLAGRSRPVTQNLHAYVRLGAGASLEHLRI-----ATPGTHDRIAHHVHVR 196
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
++ + L TGS + LRGE++ + ++ +++ + H
Sbjct: 197 L---ERDAQYRQSLLGTGSDYHLQRTVLDLRGERALARASGVLFASAHAKLEQQVRAAHA 253
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +T S I + +++G + S+ GAA + + + P++E
Sbjct: 254 AAHTQSSIDTLALASGDAQVVANAFSSIAAGAAGADLRQRLSGIPTSGEPRVVLRPHLEI 313
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + D+ LFY QRG+ A+A+IV G
Sbjct: 314 HHDDVQAAHGATWGALPDDALFYACQRGLDRRDALAMIVTG 354
>gi|167570620|ref|ZP_02363494.1| sufD domain protein [Burkholderia oklahomensis C6786]
Length = 396
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 99/281 (35%), Gaps = 12/281 (4%)
Query: 183 VGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSY 240
GD+ + A+ G + I G R+ + + +I G++
Sbjct: 82 PGDDAAPFFWAHRALCEAGLRLRIGSGPTRRAPAMLQLRLQPHASVEAPLVVIDVQPGAH 141
Query: 241 VSYLE--GCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKR 298
+E G R + A +++ + I + V R
Sbjct: 142 CVLIESHGHDLAGRSRPVTQNLHAYVRLGAGASLEHLRI-----ATPGTHDRIAHHVHVR 196
Query: 299 GDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHL 358
++ + L TGS + LRGE++ + ++ +++ + H
Sbjct: 197 L---ERDAQYRQSLLGTGSDYHLQRTVLDLRGERALARASGVLFASAHAKLEQQVRAAHA 253
Query: 359 AKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIES 418
A +T S I + +++G + S+ GAA + + + P++E
Sbjct: 254 AAHTQSSIDTLALASGDAQVVANAFSSIAAGAAGADLRQRLSGIPTSGEPRVVLRPHLEI 313
Query: 419 KNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
+ H AT + D+ LFY QRG+ A+A+IV G
Sbjct: 314 HHDDVQAAHGATWGALPDDALFYACQRGLDRRDALAMIVTG 354
>gi|15644168|ref|NP_229217.1| hypothetical protein TM1416 [Thermotoga maritima MSB8]
gi|4981981|gb|AAD36487.1|AE001794_3 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 318
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 99/260 (38%), Gaps = 12/260 (4%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I +GV + EK Q I ++ + ++ C P E+ H A+
Sbjct: 66 MRIKEGVVVEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVAHCVFP-WTEDFTHDAL 124
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT--QLETGSAI 319
+ + + A ++Y + + + G N +T+ G R+ T ++T
Sbjct: 125 MNVELEEGAWMEY------HDEHTHSETGSINLITRSIARVGERAVYRNTFTLVKTRIGT 178
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
+ L + + GE Y+ + ++ + + ++ + +
Sbjct: 179 LRVFMDASLEKD-AVGELYTKVKAVEDDDVEVKEILRLNGMGARGLAKTNAVAIDRAKVS 237
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
V+ A H+R +C + G+ +P + KN S L HEA+ +++ + L
Sbjct: 238 V--VNEVYGNAPHTRGHVECLEIAKGDGVDVRALPVLVVKNDSSELTHEASIGRVNAKQL 295
Query: 440 FYCLQRGIPEEAAIALIVNG 459
+ +G+ EE A +I+ G
Sbjct: 296 ETLMAKGLTEEEATEMIIKG 315
>gi|170289098|ref|YP_001739336.1| SufBD protein [Thermotoga sp. RQ2]
gi|281412812|ref|YP_003346891.1| SufBD protein [Thermotoga naphthophila RKU-10]
gi|170176601|gb|ACB09653.1| SufBD protein [Thermotoga sp. RQ2]
gi|281373915|gb|ADA67477.1| SufBD protein [Thermotoga naphthophila RKU-10]
Length = 318
Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 97/260 (37%), Gaps = 12/260 (4%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I +GV + EK Q I ++ + ++ C P E+ H A+
Sbjct: 66 MRIKEGVVVEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVAHCVFP-WTEDFTHDAL 124
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT--QLETGSAI 319
+ + + A ++Y + + G N +T+ G + T ++T
Sbjct: 125 MNVELEEGAWMEY------HDEHMHSETGSINLITRSIARVGEGAVYRNTFTLVKTRIGT 178
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
+ L + + GE Y+ + ++ + + ++ + +
Sbjct: 179 LRVFMDASLEKD-AVGELYTKVKAIEDDDVEVKEILRLNGMGARGLAKTNAVAIDRAKVS 237
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
V+ A H+R +C + G+ +P + KN S L HEA+ +++ + L
Sbjct: 238 V--VNEVYGNAPHTRGHVECLEIAKGDGVDVRALPVLVVKNDSSELTHEASIGRVNAKQL 295
Query: 440 FYCLQRGIPEEAAIALIVNG 459
+ +G+ EE A +I+ G
Sbjct: 296 ETLMAKGLTEEEATEMIIKG 315
>gi|221194588|ref|ZP_03567645.1| SufB/sufD domain protein [Atopobium rimae ATCC 49626]
gi|221185492|gb|EEE17882.1| SufB/sufD domain protein [Atopobium rimae ATCC 49626]
Length = 386
Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 8/211 (3%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
AA+V +VA +A I + + G + Q G
Sbjct: 147 AALVRIVAEKHARIHLVEMLGIDDDQQHLES--------VGIEAHEDAVCDVRQYALGGG 198
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+ L G ++ + + + + +D T + I GI +
Sbjct: 199 AVGMGLAVNLVGNRARLDLNNRYHACHEELLDINHVARMRGCATRAEIAESGILNDSARK 258
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
T R + + RG+ ++ ++G+ T+P I + H AT +S E
Sbjct: 259 TLRATIDLIRGSKDAKGNEAETVQILGDGVVNKTMPVILCDEDNVAGNHGATIGSVSPEQ 318
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
+ Y RG+ A L V + + P
Sbjct: 319 IEYLQARGLSRHEAELLFVRALFEDAIIHAP 349
>gi|302039086|ref|YP_003799408.1| putative FeS assembly protein SufBD [Candidatus Nitrospira
defluvii]
gi|300607150|emb|CBK43483.1| putative FeS assembly protein SufBD [Candidatus Nitrospira
defluvii]
Length = 311
Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 11/257 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ GV + F + Q + EG+ L C P ++ H
Sbjct: 62 VEAGVAIAQPIHLCFGLTHPTGVQQIAIDVQVQEGAQARVLSHCLFPV-AQSAQHRMQAV 120
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ A + Y+ G G G + G ++ ++
Sbjct: 121 MTIGPGASLTYT------EGHYHGPHGGMQVLPHATIKIGKGARYFSDFSLLSGSVGNLD 174
Query: 324 PSCLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
L+ E+ E + + +I ++ + + S I ++ + G ++ G
Sbjct: 175 IDYLVEVEEEGLAELSAKIFGHKTDRITLKESVILRGQRSRSLIKTRVVLEGDASAEITG 234
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
A +R C ++ G A +P ++ + + HEA + + L
Sbjct: 235 IT--EAHAKGARGHVDCMEIVQG-RAHASAVPIVKVFHPEAKVTHEAAIGSVDKKELETL 291
Query: 443 LQRGIPEEAAIALIVNG 459
+ RG+ E A+ LIV+G
Sbjct: 292 MARGLNPEQAVELIVSG 308
>gi|325968925|ref|YP_004245117.1| SufBD protein [Vulcanisaeta moutnovskia 768-28]
gi|323708128|gb|ADY01615.1| SufBD protein [Vulcanisaeta moutnovskia 768-28]
Length = 397
Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats.
Identities = 74/439 (16%), Positives = 138/439 (31%), Gaps = 49/439 (11%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W+ E +L A + Y K + D
Sbjct: 3 KWLDELKLRARELAQKIP-------------------YQQIKDSPSIKYYTDWG-----A 38
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+EK P E + + VSV G + I+E E
Sbjct: 39 FEKCIDPTMEIHH----APLTTNIPYEPNIVSVNGGIGITKIPRGTHVISINELGEELGK 94
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE-R 230
L+ + + ++ A + A DG+ Y+ L + +
Sbjct: 95 LL----FRSIDISESRAIARHVANLVDGA--YVEINEDLNEPLRIGIITSTEKPMLLPTH 148
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
++ ++G S + VE+ +++ N D +
Sbjct: 149 YTVLVNDGVTASLGLFTIGSGGCP----STTVEVYLGRGSKL------NVLFTDIHEQVP 198
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
Y + G S I+ L G ++ LL+G +S + I G +ID
Sbjct: 199 AYALI---KVIAGEESSINARSLIMGGSMNHHREDYLLQGRKSNLNHLGLEIGYGASRID 255
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+H + TS GI+ S +R + A S + ++ A
Sbjct: 256 YQINAVHTGEYGTSYSRVLGIARDKSFIIHRALGRIMNSARWSDTSVEGKVFVMNEGAYA 315
Query: 411 HTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
++P I N H A + ++ + Y RGI ++ LI++ V + ++ LP
Sbjct: 316 ASVPIIMVDTGDVNGARHSAADASPDEDQVNYLRLRGISKDEVTDLIIHEVVSQFIESLP 375
Query: 470 MEFAVEAQKLIDISLEGSV 488
E+AV+A+ + + + V
Sbjct: 376 REYAVDAEAIRSLIMSKIV 394
>gi|15644122|ref|NP_229171.1| hypothetical protein TM1370 [Thermotoga maritima MSB8]
gi|4981932|gb|AAD36441.1|AE001791_3 hypothetical protein TM_1370 [Thermotoga maritima MSB8]
Length = 368
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 93/255 (36%), Gaps = 18/255 (7%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
E L++ ++ + + ++ V+ ++ NA +K+ N +
Sbjct: 130 IENVLVVVEKEAEI-------YKLSSTDRFRNTVMRILVKKNASLKFF---NLDFFGNFS 179
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
++ +++ + + L + S + S NG
Sbjct: 180 FDNVF-------IVLEEGARLVLRDFKAFGYRKTGHILVKLN-KSSKADMKSFFYQNGSG 231
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D M ++ ++ G+ G +RG + V RG+ + +L++ +
Sbjct: 232 ITDLLYLMRFEGEDAEGKLKGNGVVDGAGKIVFRGILDVKRGSKNIVAEETEHTLVLSPD 291
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
IP + + H A++S + ++ LFY + RG+ E + LIV G E+L +
Sbjct: 292 ARMDAIPSLWVDENDVTASHSASSSSLDEDELFYLMTRGVDEIESKKLIVRGVFNELLDE 351
Query: 468 LPMEFAVEAQKLIDI 482
L E + +++
Sbjct: 352 LDESVKGEVENVVNR 366
>gi|222100051|ref|YP_002534619.1| SufBD protein [Thermotoga neapolitana DSM 4359]
gi|221572441|gb|ACM23253.1| SufBD protein [Thermotoga neapolitana DSM 4359]
Length = 318
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 47/260 (18%), Positives = 98/260 (37%), Gaps = 12/260 (4%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I +GV + EK Q I + G+ ++ C P E+ H A+
Sbjct: 66 MRIKEGVVVEYPVHVCTGYLEKKGLQRVIFNIKLERGAKAIFVAHCVFP-WTEDFTHDAL 124
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT--QLETGSAI 319
+ + + A ++Y + + G N +T+ G + T ++T
Sbjct: 125 MNVELEEGAWMEY------HDEHMHSETGSINLITRSIAEVGEGAVYRNTFTLVKTRIGT 178
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
+ L + + GE Y+ + ++ + K + ++ S +
Sbjct: 179 LRVFMDAELERD-AVGELYTKVKAIEDDDVEVKEILRLNGKGARGLAKTNAVALDRSRVS 237
Query: 380 YRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHL 439
V+ A H+R +C + G+ +P + KN + L HEA+ +++ + L
Sbjct: 238 V--VNEVYGNAPHTRGHVECLEITKGDAVDVRALPVLVVKNDTSELTHEASIGRVNAKQL 295
Query: 440 FYCLQRGIPEEAAIALIVNG 459
+ +G+ EE A +I+ G
Sbjct: 296 ETLMAKGLTEEEATEMIIKG 315
>gi|254169161|ref|ZP_04875997.1| hypothetical protein ABOONEI_1449 [Aciduliprofundum boonei T469]
gi|289596573|ref|YP_003483269.1| SufBD protein [Aciduliprofundum boonei T469]
gi|197621896|gb|EDY34475.1| hypothetical protein ABOONEI_1449 [Aciduliprofundum boonei T469]
gi|289534360|gb|ADD08707.1| SufBD protein [Aciduliprofundum boonei T469]
Length = 316
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 101/262 (38%), Gaps = 11/262 (4%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I KG + + F + + Q+ +T I+A+E S V +L C P H
Sbjct: 65 IRIKKGYKSKNPVHLCFGMLPREGKQYIKTEILAEEDSEVKFLAHCIFPN-AVKVEHIMD 123
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
++ + A+++Y V GK G + K G + + + +
Sbjct: 124 ANVIVENRAKVEYEEVH------FHGKLGGVKVMPKTRAIVGKGGAYNSSFVIKTGRAGF 177
Query: 322 KYPSC-LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ GE + + + I + ++ +++ I ++ + +
Sbjct: 178 VDIDYEVHIGENAKSMLLTKIYAREDDLIKANESVILEGAHSSGVIKTRMALRDKAKSEV 237
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
GK V G+ SR C +++ + A P + +KN + HEA + + L
Sbjct: 238 IGKT-VGLGSY-SRGHVDCTEIIMDD-AEAIASPVVIAKNPKAKVTHEAAIGSVDKKQLL 294
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
+ RG+ EE AI +IV G ++
Sbjct: 295 TLMARGLTEEEAIDVIVGGLLK 316
>gi|330834435|ref|YP_004409163.1| SufBD protein [Metallosphaera cuprina Ar-4]
gi|329566574|gb|AEB94679.1| SufBD protein [Metallosphaera cuprina Ar-4]
Length = 377
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 104/292 (35%), Gaps = 26/292 (8%)
Query: 174 KKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL- 232
+ +V D+ +L A K V + KG ++
Sbjct: 90 ESVTCGLVKPEDHKLVSLTLAG---------SKKVTIDKGGRYLVYNHCKGRLFCPVSIE 140
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ EG +V + + + ++V+ L+ + + +S + Y
Sbjct: 141 VNVPEGDHVDLVYYSESMEGGMP---SSVISLIVPKGSSLSFSLI--------NSSRNSY 189
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
F + G I+ + G + L E + F + ++ +++
Sbjct: 190 AFSYAKAKVEGE---INSSVFSVGQNLGHTEYHVSLEDE-AVANFNAKSLGVESNRVNVL 245
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+ H+ K + S K +++ S RG + A S +L+IG A
Sbjct: 246 ANVNHVGKKSVSNGSLKAVASENSFTIIRGDAVIGENAFDSSTTIVGKALIIGAEAKAVV 305
Query: 413 IPYIESKNSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
P +E K +H A+ SK+S++ +FY RG+ + A LI+ GF+ +
Sbjct: 306 APMLEVKTGKIVTAKHSASASKVSEDLIFYLENRGLDKRTAEGLIIRGFLTD 357
>gi|124027408|ref|YP_001012728.1| hypothetical protein Hbut_0521 [Hyperthermus butylicus DSM 5456]
gi|123978102|gb|ABM80383.1| conserved uncharacterized protein [Hyperthermus butylicus DSM 5456]
Length = 393
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 104/296 (35%), Gaps = 24/296 (8%)
Query: 155 SGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
+G+ + EA E + + ++++ V + A + A + + + +
Sbjct: 83 NGLRVYRLEEAPRE----LARIFASMLQVNETRLTAAHYAFLKEAYVLEVRDPG-----V 133
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
G ++ + G +E + VE+VA + + ++
Sbjct: 134 YRVAVCGPGGVWGSSHLVVAVEPG-----IEAALQLDILPAGSGSTAVEIVAGEGSSLEL 188
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
TV ++ + +R G + + + GSA+ +L + +
Sbjct: 189 LTVVRPPEAA------VHALLVRRLVLEGTQ--LHSATIALGSAMHRIE-EKILLAKSAS 239
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSR 394
++ G Q++D ++H + S + + S RG S+ A S
Sbjct: 240 LVHRGAGVAAGSQKLDYIADIIHQGPRSRSSVRLYSFALDKSIVAARGVASIRETARGSS 299
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPE 449
+ L++G + +T+P +E H A +IS E LFY RG+ E
Sbjct: 300 ASFDAEVLILGQHAQGYTMPLMEIDTGDVEHASHHAAQYRISSEQLFYLQSRGLSE 355
>gi|148270542|ref|YP_001245002.1| FeS assembly protein SufD [Thermotoga petrophila RKU-1]
gi|147736086|gb|ABQ47426.1| FeS assembly protein SufD [Thermotoga petrophila RKU-1]
Length = 368
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 93/261 (35%), Gaps = 26/261 (9%)
Query: 228 FERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQG 287
E L++ ++ + + ++ V+ ++ NA +K+ N +
Sbjct: 130 IENVLVVVEKEAEI-------YKLSSTDRFRNTVMRILVKKNASLKFF---NLDFFGNFS 179
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
++ +++ + + L + S + S NG
Sbjct: 180 FDNVF-------IVLEEGARLVLRDFKAFGYRKTGHILVKLN-KSSKADIKSFFYQNGSG 231
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D M ++ ++ G+ G +RG + V RG+ + +L++ +
Sbjct: 232 ITDLLYLMRFEGEDAEGKLKGNGVVDGAGKIVFRGILDVKRGSKNIVAEETEHTLVLSPD 291
Query: 408 CGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
IP + + H A++S + ++ LFY + RG+ E + LIV G E+L
Sbjct: 292 ARMDAIPSLWVDENDVTASHSASSSSLDEDELFYLMTRGVDEIESKKLIVRGVFNELLD- 350
Query: 468 LPMEFAVEAQKLIDISLEGSV 488
E + + +EG V
Sbjct: 351 -------ELDESVKGEVEGVV 364
>gi|70607146|ref|YP_256016.1| hypothetical protein Saci_1390 [Sulfolobus acidocaldarius DSM 639]
gi|68567794|gb|AAY80723.1| universally conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 389
Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ + + + L+ + + R L+I S S + + E +
Sbjct: 100 ALIKADEHKLVSLVLALSKKTIIDLSAITPRKLLIYHNSSSNSLIPANIELKIPEGENVD 159
Query: 260 AVVELVALDN-----AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLE 314
V D + I + QN S ++F+ +G +G I+
Sbjct: 160 VVYFSETDDQNSMTSSLISFVVPQNSTLNLSIISLSAHSFIYTKGLVKG---TINANIFS 216
Query: 315 TGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAG 374
+ + +T L E++ F S AI +D + HL + S +GIS
Sbjct: 217 SKTKLTHIDYYVDLD-EKAQSTFSSRAIGIEDNNVDIRVAVNHLGVQSRSEGTLRGISTD 275
Query: 375 FSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE-HEATTSK 433
S RG + S + IG + A P +E K + H A+ SK
Sbjct: 276 SSLVIVRGNAIISESGIDSSTSIIGKAYTIGKDSKAIVAPMLEVKTGKVQMAKHSASISK 335
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ ++ +FY RG + A +LI+ GF+ +
Sbjct: 336 VPEDLIFYLESRGFSRKEAESLIIKGFMID 365
>gi|256811176|ref|YP_003128545.1| SufBD protein [Methanocaldococcus fervens AG86]
gi|256794376|gb|ACV25045.1| SufBD protein [Methanocaldococcus fervens AG86]
Length = 316
Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 94/259 (36%), Gaps = 11/259 (4%)
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
G + + F I E+ Q II +E S ++ + C+ P+ H +
Sbjct: 68 GYKFEYPIHMCFGITEENISQIIDVEIILEEDSSITLMSHCSFPKGKG-IKHIMNGIIKI 126
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
NA+ Y+ G I T + + IS L T I
Sbjct: 127 GKNAKFSYNEFHYHGMD-----GDILVKPTVKVEVEEGGVYISNFTL-TKGRIGKLDIDQ 180
Query: 327 -LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVS 385
++ + + + + + ++ + ++ + S+G + S T +
Sbjct: 181 EIVAKKDAIIDITTRTYAIKEDVVNINEVVKLNGESAKCIMKSRGAAMDNSKVTLN--LK 238
Query: 386 VHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQR 445
+ A +S+ C + ++ N +IP + ++ + HEA + + L + +
Sbjct: 239 IEGNAPYSKGHIDC-AEIVKGNAEVESIPIVVVRDDRARITHEAAIGSVDKKQLETLMAK 297
Query: 446 GIPEEAAIALIVNGFVREV 464
G+ E+ A +IV G + E+
Sbjct: 298 GLDEDEATEIIVKGMIGEI 316
>gi|289522364|ref|ZP_06439218.1| membrane subunit of an iron-regulated ABC-type transporter
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504200|gb|EFD25364.1| membrane subunit of an iron-regulated ABC-type transporter
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 311
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 10/264 (3%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ + G + F K Q + I+ +EG+ + C P LHA
Sbjct: 57 ASFTVKAGAILKKPVHLCFGHLGKEGKQVIESRIVLEEGAKAKFYSHCIFPN-AVKFLHA 115
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLET-GSA 318
++V A++ Y V P + R +S L
Sbjct: 116 MEGDIVVGKGADMTYEEVHVHGPEGKIEVRPLT-----RVVVDEKGRYVSNFSLIEGRVG 170
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
I + G E S + + + ++ ++ + S
Sbjct: 171 ILSLDVEVDVVGRLGSAEITSKVYGKYDDICNVKDTIRLSGEKSSGLAKARVVLKDNSFG 230
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+ G+ V A ++ C ++ GN A +P + + + HEA +I++E
Sbjct: 231 KFYGE--VQGAADGAKGHVDCTEIVQGN-AKAEAVPVVSVVHPGAEITHEAAIGRIANEK 287
Query: 439 LFYCLQRGIPEEAAIALIVNGFVR 462
L+ + +G+ E AI +IV+G +R
Sbjct: 288 LWGLMAKGLTENEAIDVIVSGLLR 311
>gi|157363583|ref|YP_001470350.1| SufBD protein [Thermotoga lettingae TMO]
gi|157314187|gb|ABV33286.1| SufBD protein [Thermotoga lettingae TMO]
Length = 319
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 94/264 (35%), Gaps = 18/264 (6%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ K + EK Q I E S V ++ CT P E H A+
Sbjct: 69 VKKDTVLETPIHICTGYLEKQGIQRVIFEIEIQENSQVKFVAHCTFP-WAEKFTHDALSI 127
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQL-ETGSAITWK 322
+ NA++ YS G I T R ++ L +T
Sbjct: 128 VSIGRNAKMYYS-----DEHYHSNTGSITLKTTTRAKIAEKGLFVNNFTLTKTRVGKLIL 182
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
L +QS + + + Q+ K+ L K + + ++ +
Sbjct: 183 DAEAELD-DQSTADLTAKVRAIENDQVAIREKLRLLGKYSNGIAKTTVVALDKA------ 235
Query: 383 KVSVHRGAAH----SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
KV V A S+ +CD + G + T+P ++ N L HEA+ +++
Sbjct: 236 KVRVVNEAYGIGSYSKAHIRCDEVTKGEDVDVSTVPILKVLNDLSELTHEASIGRVNAAQ 295
Query: 439 LFYCLQRGIPEEAAIALIVNGFVR 462
L + +G+ EE A LI++G ++
Sbjct: 296 LQTLMSKGLSEEEATDLIISGLLK 319
>gi|291531469|emb|CBK97054.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium siraeum 70/3]
gi|291556289|emb|CBL33406.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Eubacterium siraeum V10Sc8a]
Length = 311
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 84/231 (36%), Gaps = 9/231 (3%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
EG+ V + GC E Q H + A + Y ++ G G I
Sbjct: 89 FYIGEGADVVVVAGCGVHNDGEEQARHNGIHRFFLEKGARVLY-KEKHIGTGKGTGLRKI 147
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
S + ++ + + G+ + +++G ++ +
Sbjct: 148 DP---VTDCVLDEDSYLEMDTIQLRGVDRTTRSTSAVLGKGAKIVVRERIMTDGDEEAVT 204
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ +++ + +VS+ ++ G S+ + SV G + CD+ ++ +N
Sbjct: 205 KFHVELNGEDSGADLVSRSVARGNSHQAF---YSVVEGNNRCTGHSACDA-ILADNGKVD 260
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
P + + N L HEA KI+ E + G+ E A I+ GF++
Sbjct: 261 AQPALNAANVDAALIHEAAIGKIAGEQILKLCSLGLTREEAEEKIIEGFLK 311
>gi|217076779|ref|YP_002334495.1| ABC transporter, ATP-binding protein [Thermosipho africanus TCF52B]
gi|217036632|gb|ACJ75154.1| ABC transporter, ATP-binding protein [Thermosipho africanus TCF52B]
Length = 315
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 98/259 (37%), Gaps = 10/259 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I + P + EK Q I +G+ V +L C PQ E H A+
Sbjct: 63 MEILENAHIPRPIHVCTGYVEKKGFQKVIFNIKVRKGARVKFLAHCVFPQ-AEEFEHNAI 121
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
++ + A ++Y G +TK T + +
Sbjct: 122 SNVIVEEGAYMEY------EDEHYHSDKGTIKLITKTNAVVKEGGVYKNVFSLTKTRVGK 175
Query: 322 KYPSCLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
L +Q+ GE +S ++ +++ + + SR ++K + ++
Sbjct: 176 LDIVMDLTLEKQAVGELFSKIKASKTDEVNINE--ILRLEGEHSRGIAKTVVVALDSSKA 233
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
+ + A +S+ C+ + G+N TIP ++ N L HEA+ +++ + L
Sbjct: 234 KVLNEAYGSAPYSKGHISCEEITKGSNVDVSTIPVLKIDNDLSELTHEASIGRVNQKQLE 293
Query: 441 YCLQRGIPEEAAIALIVNG 459
+ +G+ E+ A LI+ G
Sbjct: 294 MLMAKGLTEDEATELIIKG 312
>gi|291562095|emb|CBL40911.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [butyrate-producing bacterium SS3/4]
Length = 379
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 8/210 (3%)
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+L+ +A++ + + G +K+S L G +
Sbjct: 159 TKLILEKDAKVTLVQI--------IRNKNAKTVLNDIGAKVADGAKLSVIHLFLGGDRVY 210
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L G++S +D LH K + S I + G+ + +R
Sbjct: 211 NGCKAELIGKKSNFTADIAYTVADDCVLDMNYVALHEGKKSVSEIRTDGVLHENARKLFR 270
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
G + +GAA + + D LL+ ++ TIP I H AT K+ ++ +FY
Sbjct: 271 GTIDFKKGAAGAVGNEKEDVLLLDDDVVNQTIPLILCAEEDVEGNHGATIGKLDEDLVFY 330
Query: 442 CLQRGIPEEAAIALIVNGFVREVLQKLPME 471
RG+ ++ + VL+ +P E
Sbjct: 331 LESRGMALAEIYRMMAKARIDAVLRFVPDE 360
>gi|167749545|ref|ZP_02421672.1| hypothetical protein EUBSIR_00503 [Eubacterium siraeum DSM 15702]
gi|167657469|gb|EDS01599.1| hypothetical protein EUBSIR_00503 [Eubacterium siraeum DSM 15702]
Length = 311
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 84/231 (36%), Gaps = 9/231 (3%)
Query: 233 IIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
EG+ V + GC E Q H + A + Y ++ G G I
Sbjct: 89 FYIGEGADVVVVAGCGVHNDGEEQARHNGIHRFFLEKGARVLY-KEKHIGTGKGTGLRKI 147
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
S + ++ + + G+ + +++G ++ +
Sbjct: 148 DP---VTDCVLDEDSYLEMDTIQLRGVDRTTRSTSAVLGKGAKIVVRERIMTDGDEEAVT 204
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ +++ + +VS+ ++ G S+ + SV G + CD+ ++ +N
Sbjct: 205 KFHVELNGEDSGADLVSRSVARGNSHQAF---YSVVEGNNRCTGHSACDA-ILADNGKVD 260
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
P + + N L HEA KI+ E + G+ E A I+ GF++
Sbjct: 261 AQPALNAANVDAALIHEAAIGKIAGEQILKLCSLGLTREEAEEKIIEGFLK 311
>gi|150020499|ref|YP_001305853.1| SufBD protein [Thermosipho melanesiensis BI429]
gi|149793020|gb|ABR30468.1| SufBD protein [Thermosipho melanesiensis BI429]
Length = 316
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 10/262 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
+ I + V P+ + EK Q I + + V +L C PQ E H A+
Sbjct: 63 MIIHENVHVPLPVHVCTGYVEKKGLQRVIFNITVKKNARVKFLSHCVFPQ-AEEFTHEAI 121
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
++ ++A ++Y G N +TK + T + +
Sbjct: 122 SNVIVEEDAYMEY------EDEHYHSDNGNINLLTKTIAVVRKNGVYKNSFSLTKTRVGR 175
Query: 322 KYPSCLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
L +++ GE +S ++ +++ + +++ + ++ S
Sbjct: 176 LTVEMKLTLEKEAVGELFSKVKASKNDEVNINEILKLNGEHSKGLAKTVVVALDNSRA-- 233
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
+ + A +S+ C+ + G TIP + N L HEA+ +++ + L
Sbjct: 234 KVINEAYGSAPYSKGHISCEEITKGEYVNVSTIPVLRINNDLSELTHEASIGRVNQKQLE 293
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
+ +G+ E+ A LI+ G ++
Sbjct: 294 VLMAKGLTEDEATELIIKGLLQ 315
>gi|320197865|gb|EFW72473.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
EC4100B]
Length = 354
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 71/230 (30%), Gaps = 15/230 (6%)
Query: 190 ALNSAVFTDGSFVYIPKGVRCPMELSTYFRIN-----EKGTGQFERTLIIADEGSYVSYL 244
L ++ + + + +G R L E T + L EG+ + +
Sbjct: 128 HLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHL-DLAEGAEATVI 186
Query: 245 EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGM 304
E + A + NA +++ + P
Sbjct: 187 EHFVSLND-ARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHN--------DLLLAD 237
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ G A+ S L GE S S+A+ + D+ T + H S
Sbjct: 238 DATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNS 297
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIP 414
R + K I + + G ++V + A + ++LL+G T P
Sbjct: 298 RQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKP 347
>gi|153813826|ref|ZP_01966494.1| hypothetical protein RUMTOR_00032 [Ruminococcus torques ATCC 27756]
gi|317501964|ref|ZP_07960148.1| SufBD protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088220|ref|ZP_08337139.1| hypothetical protein HMPREF1025_00722 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145848222|gb|EDK25140.1| hypothetical protein RUMTOR_00032 [Ruminococcus torques ATCC 27756]
gi|316896644|gb|EFV18731.1| SufBD protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|330408464|gb|EGG87930.1| hypothetical protein HMPREF1025_00722 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 314
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 10/239 (4%)
Query: 211 PMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDN 269
++ + E+G I ++G+ V+ + GC H + N
Sbjct: 71 EEQVHIPVVMTEEGVDIVYNDFYI-EDGADVTIIAGCGIHGEGCSETRHDGIHAFHVGKN 129
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLR 329
A +KY ++N Y + N VTK + TQ+ G T + L
Sbjct: 130 ANVKY--IENHYAQGNGSGKKTLNPVTKIYVGENSVFTLETTQIS-GVDCTERENYIEL- 185
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
+ + +++ Q S + N+++RIVS+ + G S + + G
Sbjct: 186 ADNAKLFVTEKLMTDEEQSAVSNMDIELNGTNSSARIVSRSVGKGNSKQVFHPRAI---G 242
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIP 448
QCDS+++ + +IP I +K+ + HEA +I+DE L G+
Sbjct: 243 NNRCHAHVQCDSIIM-DQAEISSIPEINAKHVDAQIVHEAAIGRINDEQLVKLRTFGMS 300
>gi|242399694|ref|YP_002995119.1| SufBD protein [Thermococcus sibiricus MM 739]
gi|242266088|gb|ACS90770.1| SufBD protein [Thermococcus sibiricus MM 739]
Length = 377
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 2/158 (1%)
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +++ + +G ++ L G+ S + +D T +L + T
Sbjct: 193 GGGTRVKAFTIISGGKMSHHREDYSLEGKGSELVLRGM-PIGIGSAVDYLTNVLQYGERT 251
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
G + +RG V GA S + + + ++P +E
Sbjct: 252 VGETRVHGFAYQNGWTVHRGVAKVFEGARGSSSEVSSHVITMDKGSLGVSVPMLEVDTGD 311
Query: 423 CNL-EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
H ++ S+ ++ LFY RG+ + A++L V+G
Sbjct: 312 IEAASHSSSVSQFDEDALFYLRARGLTRKEALSLFVHG 349
>gi|240102901|ref|YP_002959210.1| Fe-S cluster containing protein, SufBD related (sufBD)
[Thermococcus gammatolerans EJ3]
gi|239910455|gb|ACS33346.1| Fe-S cluster containing protein, SufBD related (sufBD)
[Thermococcus gammatolerans EJ3]
Length = 325
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 99/270 (36%), Gaps = 23/270 (8%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ V I +GV P + + Q I + S V + C P ++ H
Sbjct: 72 AEVKIAEGVELPFPIHLCTGYLKSEGYQRVIFDINVGKNSKVRFTSHCIFP-YAKDFTHE 130
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS--WTQLETGS 317
A+ + + + + Y D G V K G ++ + +T + +
Sbjct: 131 AITRIKIGEGSSVLY--------DDEHVHGEGVRMVGKTEVEVGKNARYTGKFTLTKHRA 182
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
L GE++ E + + ++ ++ + + S I+
Sbjct: 183 KELKLEMVARL-GERAVLELETKVKAVKDDCVEMKEVAYLEGAHSRANLRSTAIAFD--- 238
Query: 378 NTYRGKVSVHRGAAH----SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
R KV+V A ++ +C ++ G+ T+P + KN L HEA+ +
Sbjct: 239 ---RAKVNVINEAYGFGDYAKGHVECHEIVKGD-ADVQTVPLLRVKNEKAELTHEASIGR 294
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
I++ L + +G+ E+ A LI+ G + E
Sbjct: 295 INEAQLIQLMAKGLTEDEAAELIIKGLLGE 324
>gi|167837268|ref|ZP_02464151.1| sufD domain protein [Burkholderia thailandensis MSMB43]
Length = 332
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 103/296 (34%), Gaps = 12/296 (4%)
Query: 168 EHPDLVKKYLSTVVPVGDNFYAALNS--AVFTDGSFVYIPKGVRCPMELSTYFRINEKGT 225
+ + + D+ + A+ G + + G + R+ + +
Sbjct: 30 DCAERAALFADLPTSSEDDAAPFFWAHRALCEAGLRLRVGSGPAHRAPVMLQLRLLPQAS 89
Query: 226 GQFERTLIIADEGSYVSYLEGCTA--PQRDENQLHAAVVELVALDNAEIKYSTVQNWYPG 283
+ +I G + +E RD + A + + V
Sbjct: 90 VEAPLVVIDVLPGGHCVLVESHEHDAAGRDGPITQNLHAYVRLGAGASLDHLRVATPGAR 149
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D I + V R ++ + L +GS + LRGE++ G +
Sbjct: 150 D-----RISHHVHVRL---ERDAQYRQSLLASGSEYHLQRTVLDLRGERALGRASGALFA 201
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
+ +++ + +H + NT S I + +++G + S+ GA+ + + +
Sbjct: 202 SAHAKLEQQVRAMHASPNTQSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIP 261
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
G P+++ + H AT + + LFY QRG+ A+A+IV G
Sbjct: 262 TGGEPRVVLRPHLDIHHDDVQAAHGATWGALPGDALFYACQRGLARRDALAMIVAG 317
>gi|307594384|ref|YP_003900701.1| SufBD protein [Vulcanisaeta distributa DSM 14429]
gi|307549585|gb|ADN49650.1| SufBD protein [Vulcanisaeta distributa DSM 14429]
Length = 400
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 70/428 (16%), Positives = 142/428 (33%), Gaps = 49/428 (11%)
Query: 52 DWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
W+ E +L A + + YY + D PE L
Sbjct: 3 KWLNELKLRARELAQKIPYQQIRDSP-------SVKYY---TDWNAFERCADPSPEDLSK 52
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
Y + IP A + +T + +I + +
Sbjct: 53 YSAINIP-------------YELNIASINGNVNITKVPSGITAI---------SINDLGE 90
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERT 231
+ K L + + ++ A + A +G ++ + + +R P+ + + ++ T
Sbjct: 91 ELGKLLFKSIDISESKALARHVANLVNGVYIEVNEDLREPLRIGVVTSLLKQALLPMHYT 150
Query: 232 LIIAD-EGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGG 290
++I D + +S + VE+ N+++ N + +
Sbjct: 151 ILIGDGVNASLSLF------MLGLGGCPSTTVEIYLGRNSKL------NVLFTSTHEQLP 198
Query: 291 IYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQID 350
Y+ + G S I+ L G ++ LL+G +S + + G +ID
Sbjct: 199 TYSLI---KVVAGDESSITARTLIMGGSMNHHREDYLLQGRRSSLNHLGLEVGYGVSRID 255
Query: 351 SGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGA 410
+H + TS GI+ S +R V A S + ++ A
Sbjct: 256 YQVNAMHTGEYGTSYSKVLGIARDKSFIIHRALGRVTESAKWSDTNVEGKVFVMNEGAYA 315
Query: 411 HTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
++P I + H A + ++ + Y RGI + LI++ + + LP
Sbjct: 316 ASVPIIMVDTGDVSGARHSAADASPDEDQVNYLRLRGISRDEVTDLIIHEVTSQFIDSLP 375
Query: 470 MEFAVEAQ 477
EF+ +A+
Sbjct: 376 SEFSYDAE 383
>gi|148270507|ref|YP_001244967.1| SufBD protein [Thermotoga petrophila RKU-1]
gi|147736051|gb|ABQ47391.1| SufBD protein [Thermotoga petrophila RKU-1]
Length = 317
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 92/252 (36%), Gaps = 12/252 (4%)
Query: 210 CPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDN 269
+ EK Q I ++ + ++ C P E+ H A++ + +
Sbjct: 73 VEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVAHCVFP-WTEDFTHDALMNVELEEG 131
Query: 270 AEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWT--QLETGSAITWKYPSCL 327
A ++Y + + G N +T+ G + T ++T +
Sbjct: 132 AWMEY------HDEHMHSETGSINLITRSIARVGEGAVYRNTFTLVKTRIGTLRVFMDAS 185
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
L + + GE Y+ + ++ + + ++ + + V+
Sbjct: 186 LEKD-AVGELYTKVKAIEDDDVEVKEILRLNGMGARGLAKTNAVAIDRAKVSV--VNEVY 242
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
A H+R +C + G+ +P + KN S L HEA+ +++ + L + +G+
Sbjct: 243 GNAPHTRGHVECLEIAKGDGVDVRALPVLVVKNDSSELTHEASIGRVNAKQLETLMAKGL 302
Query: 448 PEEAAIALIVNG 459
EE A +I+ G
Sbjct: 303 TEEEATEMIIKG 314
>gi|254173863|ref|ZP_04880534.1| membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sp. AM4]
gi|214032112|gb|EEB72943.1| membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sp. AM4]
Length = 316
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 94/270 (34%), Gaps = 23/270 (8%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ V I V P + ++ Q I S V + C P ++ H
Sbjct: 64 AEVIIEDNVELPFPIHLCTGYLKREGYQRVIFDITVGRNSKVKFTSHCIFP-YAKDFRHD 122
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS--WTQLETGS 317
A+ ++ ++ + Y D G V K G S+ + ++ ++
Sbjct: 123 ALTKIEIGRDSTVVY--------DDEHVHGEGVRMVGKTEVDVGKNSRYTGRFSLVKYRV 174
Query: 318 AITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
S L + + E S + ++ + ++ + S I+ S
Sbjct: 175 GELKLEMSARLD-DNAVAELISKVKAVKDDFVEMREVICLEGAHSRGTLKSTVIAFDNSK 233
Query: 378 NTYRGKVSVHRGAAH----SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSK 433
V A +R +C ++ GN T+P + +N L HEA+ +
Sbjct: 234 VN------VVNEAYGLGDYARAHVECHEIVKGN-ADVQTVPLLRVQNDKAELTHEASIGR 286
Query: 434 ISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
I++ L + +G+ EE A LI+ G + E
Sbjct: 287 INEAQLVQLMAKGLTEEEATELIIKGLLGE 316
>gi|302349077|ref|YP_003816715.1| FeS assembly protein SufD [Acidilobus saccharovorans 345-15]
gi|302329489|gb|ADL19684.1| FeS assembly protein SufD [Acidilobus saccharovorans 345-15]
Length = 385
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 66/324 (20%), Positives = 117/324 (36%), Gaps = 23/324 (7%)
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFR---INEKGTGQ 227
D+V + SA V G S +R +G G
Sbjct: 60 DMVLGPCGASYNYDIDESVLDLSAFKLYAEHVARLAGAHKLEPTSGTYRIALCRPEGDGW 119
Query: 228 FE-RTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ LI +EG + L +E+ A N+ + V
Sbjct: 120 YSYHLLINVNEGVSANILVYAPRASPGTTG-----IEVRAKRNSNLNLVIVAEPQAEKPM 174
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGF 346
F+ +R G+ +K+ T + GS +T LL S S S+
Sbjct: 175 A------FILRRAL--GVGAKVRSTVVSGGSVMTRVDEQSLLS-SGSQLVHRSFVASSEG 225
Query: 347 QQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGN 406
Q +D + ++T+ + G S+G S + RG V ++ + S + ++LL+
Sbjct: 226 QTVDDVIDTVQTGHDSTADVTGFGFSSGRSLVSVRGTVIMNPQSYGSSSSFVVEALLLSE 285
Query: 407 NCGAHTIPYIESKNSSCNL-EHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVL 465
A+T+P + H A ++ + LFY RG+ + A L++ G ++ L
Sbjct: 286 ESRAYTMPMMRIDTGDIRAASHRAAQYRVPLDQLFYLESRGLNGQEAFELLLRGKLQSTL 345
Query: 466 QKLPMEFAVEAQ----KLIDISLE 485
LP E +A+ +LI ++E
Sbjct: 346 DGLPAELTFQAEDLGVRLIKKAVE 369
>gi|15921462|ref|NP_377131.1| hypothetical protein ST1199 [Sulfolobus tokodaii str. 7]
gi|15622248|dbj|BAB66240.1| 384aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 384
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/309 (17%), Positives = 115/309 (37%), Gaps = 27/309 (8%)
Query: 183 VGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF--ERTLIIADEGSY 240
+N A + + + + + N G I EG+
Sbjct: 93 PTNNLMKADETKLVSLTLALSKKLKINIEDSSKILIYHNVTEKGYISPANIEINVKEGAI 152
Query: 241 VSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGD 300
V + A + L ++V+ L ++++ ++ + Y + +
Sbjct: 153 VDII--YLAENEIPDSLQSSVISLKIGRDSQVNFTLI----------AKSTYIYNYSKVY 200
Query: 301 CRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAK 360
C G ++ T T S + + +L + + F + +I +ID + H
Sbjct: 201 CEGE---LNATLFATKSKMAHIEYTTILEKD-ARSVFSAKSIGRDNDKIDMKVNVQHEGL 256
Query: 361 NTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKN 420
+ S KGI+ + RG SV++ A S + ++G + + P +E K
Sbjct: 257 RSVSEGNLKGIATDNALVVVRGDASVNQIAFDSSTSIIGRAYILGKDAKSIVAPMLEVKT 316
Query: 421 SSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVE-AQK 478
+H A+ S++ D+ +FY RG+ + A + ++ GF+ + E E +K
Sbjct: 317 GRVLMAKHSASVSRVPDDLIFYLENRGLSRKEAESFLIRGFIED-------EKDPEILKK 369
Query: 479 LIDISLEGS 487
+I+ +L S
Sbjct: 370 VIEETLAES 378
>gi|294936777|ref|XP_002781866.1| hypothetical protein Pmar_PMAR016316 [Perkinsus marinus ATCC 50983]
gi|239892940|gb|EER13661.1| hypothetical protein Pmar_PMAR016316 [Perkinsus marinus ATCC 50983]
Length = 548
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 24/129 (18%)
Query: 381 RGKVSVHRGAAHSRNFTQCDS----LLIGN--NCGAHTIPYIESK------NSSCN---- 424
RG+ V + N Q D+ + IG+ + T+P +++ +
Sbjct: 424 RGQCRVTL----TNNAQQADTGTKMIHIGDNTKSISSTLPVLQTSGVDSDGADDVDYGHH 479
Query: 425 ----LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
+EHEA+TS++S + L Y + RG+ E ++L++ GF +V +LP+EFA EA ++
Sbjct: 480 DGQVIEHEASTSRVSADQLQYLMSRGLQESDVLSLLLVGFCEDVFTELPLEFAEEASAML 539
Query: 481 DISLEGSVG 489
L G+VG
Sbjct: 540 KERLRGTVG 548
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 27 IQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMK--DPSWARI------RY 78
+ + GL+ IR IS EPDWML +R A++ W P W +
Sbjct: 209 VDAIQVAPGLDLATIRKISEVNKEPDWMLHFREKAFKWWKAQDDNVPEWGDVANRMPHDI 268
Query: 79 PAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAV 138
+ ++ ++ P+ + + + + + + I+E + AVDAV
Sbjct: 269 RDM-LQNMSMFSRPQHLPSARPGVE-NILNMNLNDDNNDSIKEGGGSPAHAATAAAVDAV 326
Query: 139 FDSVSVVTTFKEEL-KKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
FDS+S+ TT ++EL K G+IF + EA ++PDLV KYL +VVPV DN+YAALNS VF+
Sbjct: 327 FDSLSIATTRRKELYDKYGIIFCSLLEAARDYPDLVHKYLGSVVPVNDNYYAALNSCVFS 386
Query: 198 D 198
D
Sbjct: 387 D 387
>gi|255024045|ref|ZP_05296031.1| hypothetical protein LmonocyFSL_12550 [Listeria monocytogenes FSL
J1-208]
Length = 74
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 15 DVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
++ +Y+YGF + V + +GL E ++R IS K EP+WMLE+RL + ++ M P+W
Sbjct: 6 EIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPEWMLEFRLKSLEQFYKMPMPTW 65
Query: 74 ARIRYPAIDF 83
+ F
Sbjct: 66 GG-DLSELKF 74
>gi|330825169|ref|YP_004388472.1| SufBD protein [Alicycliphilus denitrificans K601]
gi|329310541|gb|AEB84956.1| SufBD protein [Alicycliphilus denitrificans K601]
Length = 411
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 93/264 (35%), Gaps = 11/264 (4%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQL--HAAVVE 263
+ + R + + ++ D G +E + D
Sbjct: 121 TPGKEREPVWLELRHQPRAQAEAPLLVLDVDPGVRCVLIETHERAEGDCLHPVAQNLQAH 180
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
++ A++++ + G + ++ + + T + +
Sbjct: 181 VLLGAGAQLQHLRI--------VSPGAADSVAHHIHASLAAGAQYAQALVATCGSYHLQR 232
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
S L+G+ + ++A++ Q + A +T S+ + ++ G ++
Sbjct: 233 NSIALQGQGAQAHSAALALAGSQQIDLQTYTQVQAA-HTVSQAEALVLAQGRAHAVANAH 291
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ G + + + + + P++E + + H AT + ++ LFY
Sbjct: 292 TRIAPGCDEAGVRQRLMGVPLAGSPRLILRPHLEILHDNVQAAHGATWGALPEDALFYAR 351
Query: 444 QRGIPEEAAIALIVNGFVREVLQK 467
QRG+ E +A ALI+ G R +L++
Sbjct: 352 QRGLDEASARALIIEGMARALLER 375
>gi|220932646|ref|YP_002509554.1| SufBD protein [Halothermothrix orenii H 168]
gi|219993956|gb|ACL70559.1| SufBD protein [Halothermothrix orenii H 168]
Length = 316
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 11/260 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
I G R + F + K Q+ + + E + V L C+ P+ + +H +
Sbjct: 67 IADGARFKKPMHMCFGVTHKEGLQYIQAEYVVGEDAEVHLLAHCSFPK-AKKVIHKMDAD 125
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NA + Y V + K + +
Sbjct: 126 IHLKKNAILTYEEVHYHGQEAGVE------VIPKTRAKLDEGAYFFSEFKLVKGRVGKLD 179
Query: 324 PSCLL-RGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
+ + ++S + S I ++ + + ++ +A + + G
Sbjct: 180 VDIEVDQAKKSASKLISKVYGKETDSIKIKERLNLNEEGSKGLAKTRVFAADQTVSEVIG 239
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ A + + C + IP I+ N L HEA+ +I+ + L
Sbjct: 240 EAY--GNAPNVKGHIDC-VEAVKGEAEVSAIPIIKVNNDLAELSHEASIGRINQKQLETL 296
Query: 443 LQRGIPEEAAIALIVNGFVR 462
+ RG+ E+ A LIVNG +R
Sbjct: 297 IARGLSEDEATDLIVNGMLR 316
>gi|14590740|ref|NP_142810.1| hypothetical protein PH0883 [Pyrococcus horikoshii OT3]
gi|6686120|sp|O58613|Y883_PYRHO RecName: Full=UPF0051 protein PH0883
gi|3257294|dbj|BAA29977.1| 326aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 326
Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 92/266 (34%), Gaps = 23/266 (8%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
I V+ P + Q I + S V + C P ++ H A+
Sbjct: 77 IADNVKLPFPIHLCTGYLRSEGYQKVIFNIKIGKNSIVKFTSHCIFP-YAKDFSHEALTS 135
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKIS--WTQLETGSAITW 321
+ +N+ + Y D G ++K ++ + ++ + +
Sbjct: 136 IKVGENSWVSY--------EDEHIHGEGVRMISKTEIELNKNARYTGKFSLTKHRAKELK 187
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L GE+S E S + ++ + + + S I+ +
Sbjct: 188 LEMIANL-GERSVLELESKVKAVKDDSVEVREVAYLKGAYSRANLKSTVIAFDEARAN-- 244
Query: 382 GKVSVHRGAAH----SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDE 437
V A ++ +C ++ GN T+P + KN L HEA+ +I++
Sbjct: 245 ----VVNEAYGFGDYAKGHVECHEIVKGN-ADVQTVPLLRVKNDKAELTHEASIGRINEA 299
Query: 438 HLFYCLQRGIPEEAAIALIVNGFVRE 463
L + +G+ +E A LI+ G + E
Sbjct: 300 QLMQLMAKGLTDEEATELIIRGLLGE 325
>gi|261403661|ref|YP_003247885.1| SufBD protein [Methanocaldococcus vulcanius M7]
gi|261370654|gb|ACX73403.1| SufBD protein [Methanocaldococcus vulcanius M7]
Length = 309
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 11/262 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ KG + + F I E+ T Q II +E S +S + C+ P+ H
Sbjct: 58 VKKGYKFKYPIHMCFGITEENTSQIIDVEIILEEDSSISLMSHCSFPKGKG-IKHIMNGI 116
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NA Y G G T I
Sbjct: 117 IKIGKNARFSY------NEFHYHGIDGEILVKPSMKVEIEEGGIYISNFTLTKGRIGVLD 170
Query: 324 PSC-LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
++ G+ + + + + + + +N I S+G S + +
Sbjct: 171 IDQEIIAGKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGASMDNAKISL-- 228
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
K+ + A +S+ C + ++ N +IP + ++ + HEA + + L
Sbjct: 229 KLKIEGNAPYSKGHIDC-AEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETL 287
Query: 443 LQRGIPEEAAIALIVNGFVREV 464
+ +G+ E+ A +IV G + ++
Sbjct: 288 MAKGLDEDEATEIIVKGMIGDL 309
>gi|330861449|emb|CBX71672.1| hypothetical protein YEW_LR49790 [Yersinia enterocolitica W22703]
Length = 88
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 14 IDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSW 73
+ +YK GF T + D+ KG+NED+IR ISAK+NEP+WMLE+RL AYR WL M++P W
Sbjct: 16 VSDGRYKEGFFTQLATDELAKGINEDVIRAISAKRNEPEWMLEFRLGAYRSWLEMEEPHW 75
Query: 74 ARIRYPA 80
+ Y
Sbjct: 76 LKAHYKK 82
>gi|213024289|ref|ZP_03338736.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 55
Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 46/54 (85%)
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
++ LFYCLQRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 2 EDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 55
>gi|225389581|ref|ZP_03759305.1| hypothetical protein CLOSTASPAR_03329 [Clostridium asparagiforme
DSM 15981]
gi|225044355|gb|EEG54601.1| hypothetical protein CLOSTASPAR_03329 [Clostridium asparagiforme
DSM 15981]
Length = 329
Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 9/231 (3%)
Query: 233 IIADEGSYVSYLEGCTAPQR-DENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
D G+ V + GC E+ H + + + + Y ++ G G I
Sbjct: 106 FYVDAGADVIIVAGCGVHTDGAEDAAHNGIHRFFLENGSRVIY-REKHVGTGTGSGLKRI 164
Query: 292 YNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDS 351
G S + ++ G + + ++G +
Sbjct: 165 DP---VTFAVLGPGSALEMDTVQLGGVDRTVRKTSARLAAAARLTIRERIQTDGRDTART 221
Query: 352 GTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAH 411
+ + ++S+ ++ G S TYR ++ G ++CD++L+ +
Sbjct: 222 DFTVSMDGDGSAVNLISRSVARGSSRQTYRSRLM---GNCRCSGHSECDAILM-DRGRVD 277
Query: 412 TIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
P + + +L HEA +I+ E + G+ EEAA I+ GF+
Sbjct: 278 AFPELIAGCRDVSLIHEAAIGRIAGEQIVKLRTLGLSEEAAERRIIEGFLN 328
>gi|315186891|gb|EFU20649.1| SufBD protein [Spirochaeta thermophila DSM 6578]
Length = 317
Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 89/262 (33%), Gaps = 9/262 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
V + +GV + F + + Q I ++GS V++ CT PQ ++ H
Sbjct: 64 VRVKEGVAIEKPVHLCFGMTGERGVQKIDMEIEVEKGSSVAFQAHCTFPQ-AKDIHHLMD 122
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+V + A +Y P G + TK +G + +E +
Sbjct: 123 ARIVIGEGARYRYVEKHIHGPEG----GVVVIPKTKVKVEKGGSFFSEFYLVEGCAGKVD 178
Query: 322 KYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
E S + + I K+ + ++S +
Sbjct: 179 LDYEVEAEAE-SSVDLRTYVYGKLRDTIRVREASFLNGKDAVAVLMSHIAVKDEAKAEV- 236
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
+ A +R C ++ + A +P I+ ++ + ++ HEA + + L
Sbjct: 237 -VNELTARAPGARGHVDCKE-IVQDRAVARAVPLIQVEDPAAHITHEAAIGSVDSKQLQT 294
Query: 442 CLQRGIPEEAAIALIVNGFVRE 463
+ RG+ EE A +I+ E
Sbjct: 295 LMARGLSEEEATDVIIRALFTE 316
>gi|307719207|ref|YP_003874739.1| membrane subunit of an iron-regulated ABC-type transporter
[Spirochaeta thermophila DSM 6192]
gi|306532932|gb|ADN02466.1| membrane subunit of an iron-regulated ABC-type transporter
[Spirochaeta thermophila DSM 6192]
Length = 317
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 9/260 (3%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ +G R + F + + Q ++ + GS V++ CT P H
Sbjct: 66 VKEGARIKKPVHLCFGMTGERGIQKIDMHVVLEAGSSVAFQAHCTFPN-AREIRHLMDAR 124
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+V + A +Y P G + T+ G R + +E + +
Sbjct: 125 IVVGEGARYRYVEKHIHGPEG----GVVVIPKTRVKVKEGGRFFSEFYLVEGCAGVVDLD 180
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
+S + + I + T+ +++ +
Sbjct: 181 YEVE-AEARSSVDLRTYVYGKRRDTIKVREAASLNGVDATAVLMTHIAVKDEARAEV--I 237
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ A +R C ++ + A +P I+ ++ + ++ HEA + + L +
Sbjct: 238 NELTARAPGARGHVDCKE-IVQDRAVARAVPLIQVEDPAAHITHEAAIGSVDSKQLQTLM 296
Query: 444 QRGIPEEAAIALIVNGFVRE 463
RG+ EE A +I+ E
Sbjct: 297 ARGLTEEEATDVIIRALFAE 316
>gi|302338841|ref|YP_003804047.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
gi|301636026|gb|ADK81453.1| SufBD protein [Spirochaeta smaragdinae DSM 11293]
Length = 317
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 13/266 (4%)
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
+ + GV + F I + Q + +EG+ ++ CT P H
Sbjct: 63 SVVIRLAAGVELEKPVYFCFGILPEQGMQRIEMDVRIEEGAKAEFVAHCTFPN-AREVTH 121
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
++V +A +Y + G V K + S
Sbjct: 122 LMDAKIVLEKDASYRY------FERHIHSPEGGLTVVPKAQVELKEGASFSSEFELIKGR 175
Query: 319 ITWKYPSCLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN 377
+ + G ++ E S G +I + + S G +
Sbjct: 176 VGSIDIDYEVECGPRATMELISRISGKGNDKIRIREAGHLAGAYSKGLLASHIALRGDAV 235
Query: 378 N-TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISD 436
+ + A ++ C + ++ + A +P ++ ++ ++ HEA +
Sbjct: 236 AEIFN---DLRASAPYATGHVDC-NEIVQDRARAKAVPVVQVEDPKAHVTHEAAIGSVDS 291
Query: 437 EHLFYCLQRGIPEEAAIALIVNGFVR 462
+ L + RG+ EE A+ +I+ G +
Sbjct: 292 KQLQTLMSRGLSEEQAVEMIIEGMLS 317
>gi|89574344|gb|ABD77389.1| ORF470 [Plasmodium yoelii]
gi|89574346|gb|ABD77390.1| ORF470 [Plasmodium yoelii killicki]
gi|89574348|gb|ABD77391.1| ORF470 [Plasmodium yoelii nigeriensis]
gi|89574350|gb|ABD77392.1| ORF470 [Plasmodium yoelii yoelii]
gi|89574352|gb|ABD77393.1| ORF470 [Plasmodium yoelii yoelii]
Length = 216
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ K I YKY + I + GLN+++I+ +S ++ ++++ + +
Sbjct: 9 LKKFLNIYNLNYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNM 68
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P W+ P I++D++ YY++ + + L
Sbjct: 69 FKLPDWSFFECPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDT 114
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+ ++D +FDS+SV+ T + LKK G+IF+ + + + ++P L+KKYL TVV DNF
Sbjct: 115 ILIKNNSIDVIFDSISVLHTTQYFLKKLGIIFLSLFDVVLKYPLLIKKYLGTVVSYKDNF 174
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
+A +NS +F++GSF Y+ K ++C LSTYF+ N QFE
Sbjct: 175 FANINSIIFSEGSFCYVSKYIKCSFNLSTYFKTNSYDFAQFE 216
>gi|319763106|ref|YP_004127043.1| sufbd protein [Alicycliphilus denitrificans BC]
gi|317117667|gb|ADV00156.1| SufBD protein [Alicycliphilus denitrificans BC]
Length = 411
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 93/264 (35%), Gaps = 11/264 (4%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE-- 263
+ + R + + ++ D G +E + D A +
Sbjct: 121 TPGKEREPVWLELRHQPRAQAEAPLLVLDVDPGVRCVLIETHERAEGDCLHPVAQNLHAH 180
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ A++++ + G + ++ + + T + +
Sbjct: 181 VRLGAGAQLQHLRI--------VSPGAADSVAHHIHASLAAGAQYAQALVATCGSYHLQR 232
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
S L+G+ + ++A++ Q + A +T S+ + ++ G ++
Sbjct: 233 NSIALQGQGAQAHSAALALAGSQQIDLQTYTQVQAA-HTVSQAEALVLAQGRAHAVANAH 291
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCL 443
+ G + + + + + P++E + + H AT + ++ LFY
Sbjct: 292 TRIAPGCDEAGVRQRLMGVPLAGSPRLILRPHLEILHDNVQAAHGATWGALPEDALFYAR 351
Query: 444 QRGIPEEAAIALIVNGFVREVLQK 467
QRG+ E A ALI+ G R +L++
Sbjct: 352 QRGLGEACARALIIEGMARALLER 375
>gi|307297729|ref|ZP_07577535.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916989|gb|EFN47371.1| SufBD protein [Thermotogales bacterium mesG1.Ag.4.2]
Length = 318
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/320 (13%), Positives = 114/320 (35%), Gaps = 13/320 (4%)
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYI 204
T +E +++G +S+ + + + + V+ + + T+G +++
Sbjct: 10 FTAIAKEYERAG---GNVSDFLRKDIVSIIVSGNKVIGRNTVDGVHVRAKELTNGVEIWL 66
Query: 205 P--KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVV 262
G + + Q + + ++ C P N H+ +
Sbjct: 67 EIDGGTVIENPIHLCTGYLKPEGTQEVLIHNRLGDHTKAKFISHCVFPSG-VNFTHSMIA 125
Query: 263 ELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWK 322
+ + +E+ Y YN V + G ++ T++ + K
Sbjct: 126 DTDVGNYSEMLYEDTHMHSKDGGVTVKATYNTVVREGGRFQNLFYLTKTRV---GKLFVK 182
Query: 323 YPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRG 382
+ L + + S ++ ++ + ++ + + S
Sbjct: 183 -MNVDLEKD-ASAHIESKVYERDDDYLEIDEQLYLNGEGSSGIAKTTVFATDRSRAKI-- 238
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
+ AA+S+ +C+ ++ G++ T+P + +N L HEA+ +++ + +
Sbjct: 239 INKAYGNAAYSKGHIECNEIIKGDSVEVGTVPELYVRNEKAELTHEASIGRVNVKQMETL 298
Query: 443 LQRGIPEEAAIALIVNGFVR 462
+ +G+ EE A +IV G +R
Sbjct: 299 MSKGLTEEEATDMIVRGMLR 318
>gi|296109784|ref|YP_003616733.1| SufBD protein [Methanocaldococcus infernus ME]
gi|295434598|gb|ADG13769.1| SufBD protein [Methanocaldococcus infernus ME]
Length = 315
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/323 (15%), Positives = 109/323 (33%), Gaps = 11/323 (3%)
Query: 143 SVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDG--S 200
SV E ++ E I + ++ V D+ + + +
Sbjct: 2 SVKQELLEAIEFIKYTAEKPEEIIHGKGPRIIVREGKILDVKDDEGIVIEGSDKEGKIRA 61
Query: 201 FVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAA 260
+ + +G + + I + Q II ++ S ++ L C+ P+ ++ H
Sbjct: 62 KIVVKEGYKFKYPIHVCMGITQDNVCQEIDVEIILEDNSEITLLSHCSFPKG-KDLKHIM 120
Query: 261 VVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAIT 320
+ NA+ Y + +G S+ + T G+
Sbjct: 121 DGRIKIGKNAKFVYKEIHYHGEEGKILVKPTVKVEIDKGGIY--ISEFNLTHGRIGTLEI 178
Query: 321 WKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
++ E S + + + ++ + +N + I S+G S
Sbjct: 179 YQEIEAK---EDSIIDILTKTYAIKDDKVKIDEIVKLNGENAKAMIRSRGAGKDNSKIIL 235
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
K + A H + C + +I N +IP + ++ + + HEA + + L
Sbjct: 236 --KFKIEGNAPHCKGHIDC-AEVIKGNAEVESIPIVLVRDETARITHEAAIGSVDRKQLE 292
Query: 441 YCLQRGIPEEAAIALIVNGFVRE 463
+ +G+ EE A +I+ G + E
Sbjct: 293 TLMAKGLDEEEATEIIIKGMIGE 315
>gi|89574330|gb|ABD77382.1| ORF470 [Plasmodium vinckei]
Length = 215
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 14/211 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 19 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 78
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 79 CPNINYDNIIYYSSILKDSNLLLYLKANLNI--------------NFLDTILIKNNSIDV 124
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 125 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 184
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQF 228
+GSF YI K ++C LSTYF+ N QF
Sbjct: 185 EGSFCYISKYIKCNFNLSTYFKTNSYDFAQF 215
>gi|89574316|gb|ABD77375.1| ORF470 [Plasmodium atheruri]
Length = 216
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 14/212 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 19 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 78
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 79 CPNINYDNIIYYSSILKDSNLLLYLKANLNI--------------NFLDTILIKNNSIDV 124
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 125 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 184
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTGQFE 229
+GSF YI K ++C LSTYF+ N QFE
Sbjct: 185 EGSFCYISKYIKCNFNLSTYFKTNSYDFAQFE 216
>gi|218135065|ref|ZP_03463869.1| hypothetical protein BACPEC_02970 [Bacteroides pectinophilus ATCC
43243]
gi|217990450|gb|EEC56461.1| hypothetical protein BACPEC_02970 [Bacteroides pectinophilus ATCC
43243]
Length = 323
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 90/252 (35%), Gaps = 9/252 (3%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQ-LHAAVVELVALDNA 270
++ I + G EG+ V+ + GC H + N+
Sbjct: 80 EKVYIPACITKAGVDDLVYNDFYIAEGADVTIVAGCGIHTETGEPARHNGIHRFFLEKNS 139
Query: 271 EIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
+ Y ++ + VT+ G ++ +QL L G
Sbjct: 140 HVLY--LEKHVGTGFIKAKRSIDPVTEAWLADGALLEMETSQLGGVQTALRN-TKATLEG 196
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
S +++ + + + ++ ++ +VS+ ++ G S Y + G
Sbjct: 197 -ASSLVIREHLLTDSDETLTTNFDVVLNGDGSSVNLVSRSVARGESYQEYHSNIV---GN 252
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEE 450
A ++CD+++ ++ P + + N L HEA KI+ E + G+ E
Sbjct: 253 AKCSGHSECDAII-TDHGKVTAQPALTAANEDAALIHEAAIGKIAGEQILKLRTLGLTES 311
Query: 451 AAIALIVNGFVR 462
A A I+NGF++
Sbjct: 312 EAEAAIINGFLK 323
>gi|156741168|ref|YP_001431297.1| SufBD protein [Roseiflexus castenholzii DSM 13941]
gi|156232496|gb|ABU57279.1| SufBD protein [Roseiflexus castenholzii DSM 13941]
Length = 331
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 86/263 (32%), Gaps = 11/263 (4%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ + + GVR + F + + Q G+ V +L CT P + H
Sbjct: 76 AQIMVAPGVRLERPMHLCFGMIAETGVQRIVADYEIGVGAQVEFLAHCTFPN-ARDLRHI 134
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
+ ++A + Y+ G G + G G + T +
Sbjct: 135 MDATVRISEDAHMNYT------EAHYHGPHGGVVVEARAGVAIGAGGRYFSTFSLVHGRV 188
Query: 320 TWKYPSCLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+ + S+ I+ + + ++ + +
Sbjct: 189 GRLLIDYIADVAASGVADLTSMVYGVDDDDIEVREVVRLNGEKARGLAKTRIAVRDRARS 248
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
R + A +R C ++ G+ A IP I ++ ++ HEA ++ +
Sbjct: 249 --RVFTTAEGNAPGTRGHMDCAEIVRGD-AVAANIPTIIVRSDEAHVTHEAAIGSVNRKE 305
Query: 439 LFYCLQRGIPEEAAIALIVNGFV 461
L + RG+ E+ A+ +I+ G +
Sbjct: 306 LETLMARGLDEDTAVDVIIRGML 328
>gi|89574318|gb|ABD77376.1| ORF470 [Plasmodium berghei]
Length = 210
Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ K I YKY + I + GLN+++I+ +S ++ ++++ + +
Sbjct: 9 LKKFLNIYNLNYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNM 68
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P W+ P I++D++ YY+ + L Y K + I L
Sbjct: 69 FKLPDWSFFECPNINYDNIIYYS-----------SILKDSNLLVYLKTNLNI---NFLDT 114
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+ ++D +FDS+SV+ T + LKK G+IF+ + + I ++P LVKKYL TVV DNF
Sbjct: 115 ILIKNNSIDVIFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLVKKYLGTVVSYKDNF 174
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
+A +NS +F++GSF Y+ K ++C LSTYF+ N
Sbjct: 175 FANINSIIFSEGSFCYVSKYIKCSFNLSTYFKTNS 209
>gi|89574320|gb|ABD77377.1| ORF470 [Plasmodium berghei]
Length = 210
Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 8 VDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLT 67
+ K I YKY + I + GLN+++I+ +S ++ ++++ + +
Sbjct: 8 LKKFLNIYNLNYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNM 67
Query: 68 MKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAG 127
K P W+ P I++D++ YY+ + L Y K + I L
Sbjct: 68 FKLPDWSFFECPNINYDNIIYYS-----------SILKDSNLLVYLKTNLNI---NFLDT 113
Query: 128 VQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNF 187
+ ++D +FDS+SV+ T + LKK G+IF+ + + I ++P LVKKYL TVV DNF
Sbjct: 114 ILIKNNSIDVIFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLVKKYLGTVVSYKDNF 173
Query: 188 YAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINE 222
+A +NS +F++GSF Y+ K ++C LSTYF+ N
Sbjct: 174 FANINSIIFSEGSFCYVSKYIKCSFNLSTYFKTNS 208
>gi|15668204|ref|NP_246997.1| hypothetical protein MJ_0034 [Methanocaldococcus jannaschii DSM
2661]
gi|2495753|sp|Q60349|Y034_METJA RecName: Full=UPF0051 protein MJ0034
gi|1590837|gb|AAB98015.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 316
Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 11/259 (4%)
Query: 207 GVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVA 266
G + + F I E+ Q II +E S +S + C+ P+ H +
Sbjct: 68 GYKFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGKG-IKHIMNGIIKI 126
Query: 267 LDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC 326
NA+ Y G G T I
Sbjct: 127 GKNAKFSY------NEFHYHGMDGDILVKPTVKVEIDEGGIYISNFTLTKGRIGTLDIEQ 180
Query: 327 -LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVS 385
++ + + + + + + + +N I S+G + S + K+
Sbjct: 181 EIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISL--KLK 238
Query: 386 VHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQR 445
+ A +S+ C + ++ N +IP + ++ + HEA + + L + +
Sbjct: 239 IEGNAPYSKGHIDC-AEIVKGNAEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAK 297
Query: 446 GIPEEAAIALIVNGFVREV 464
G+ E+ A +IV G + ++
Sbjct: 298 GLDEDEATEIIVKGMIGDL 316
>gi|313617383|gb|EFR89789.1| FeS assembly protein SufD [Listeria innocua FSL S4-378]
Length = 184
Score = 99.8 bits (247), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 18/192 (9%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST-VVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTY 217
F I A+ HP+LVKKY T V V +N A ++A+ G F+Y+PK V +
Sbjct: 113 FTDIISAVKNHPELVKKYFMTDAVQVNENKLTAFHAALVNGGIFLYVPKNVEVKAPIQAV 172
Query: 218 FRINEKGTGQFE 229
F + T
Sbjct: 173 FVQEKXXTHLIN 184
>gi|289192421|ref|YP_003458362.1| SufBD protein [Methanocaldococcus sp. FS406-22]
gi|288938871|gb|ADC69626.1| SufBD protein [Methanocaldococcus sp. FS406-22]
Length = 316
Score = 99.8 bits (247), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 85/257 (33%), Gaps = 11/257 (4%)
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
+ + F I E+ Q II +E S +S + C+ P+ H +
Sbjct: 70 KFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFPKGRG-IKHIMNGIIKIGK 128
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSC-L 327
NA+ Y G G T I +
Sbjct: 129 NAKFSY------NEFHYHGMDGDILVKPTVKVEIEEGGIYISNFTLTKGRIGTLDIEQEI 182
Query: 328 LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
+ + + + + + + + +N I S+G + S + K+ +
Sbjct: 183 IAKKDAIIDITTRTYAIKEDVVKVNEVVKLNGENAKCIIKSRGAAMDNSKISL--KLKIE 240
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
A +S+ C + ++ +IP + ++ + HEA + + L + +G+
Sbjct: 241 GNAPYSKGHIDC-AEIVKGQAEVESIPIVVVRDDRARITHEAAIGSVDKKQLETLMAKGL 299
Query: 448 PEEAAIALIVNGFVREV 464
E+ A +IV G + ++
Sbjct: 300 DEDEATEIIVKGMIGDL 316
>gi|239616988|ref|YP_002940310.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
gi|239505819|gb|ACR79306.1| SufBD protein [Kosmotoga olearia TBF 19.5.1]
Length = 318
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 99/264 (37%), Gaps = 12/264 (4%)
Query: 201 FVYIPKGVRCPMELSTY--FRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
++ + V+ + + E F T I + + V ++ C P+ N H
Sbjct: 65 WINVADNVQLNNPIHLCTGYLKPEGTQRVFIHTKI--GKNAKVDFISHCVFPKG-TNFTH 121
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ + +N+++ Y+ P +YN R G+ +
Sbjct: 122 KMIADTEIGENSKVSYNDTHFHSPDGGVTVEAVYN---TRVAKNGLFENVFHLTKTRVGK 178
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+ + +L +++ S +++ ++ ++ S ++K + +
Sbjct: 179 L-FVQMKVVL-EKKASAFLESKVFEKEDDEVEIIEELNLDGES--SSGIAKTVVFATDRS 234
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEH 438
+ A ++ +C ++ G+N TIP + K+ L HEA+ +++ +
Sbjct: 235 RAKIINRAFGNAPFAKGHIECKEVVKGDNVNVGTIPELYVKDEKAELTHEASIGRVNVKQ 294
Query: 439 LFYCLQRGIPEEAAIALIVNGFVR 462
L + +G+ E+ A LIV G ++
Sbjct: 295 LETLMSKGLTEDEATELIVRGMLK 318
>gi|89574322|gb|ABD77378.1| ORF470 [Plasmodium chabaudi adami]
Length = 210
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 16 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 75
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 76 CPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDV 121
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 122 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 181
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+GSF YI K ++C LSTYF+ N
Sbjct: 182 EGSFCYISKYIKCNFNLSTYFKTNSYDFA 210
>gi|218884519|ref|YP_002428901.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
gi|218766135|gb|ACL11534.1| SufBD protein [Desulfurococcus kamchatkensis 1221n]
Length = 257
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
I+ G + ++ +VSK ++ + RG +H S+ +C L++
Sbjct: 120 IEYGGAVYLNGDEASAEVVSKALAREEARVVTRG--RLHARGRGSKGHLECRGLMLSEKA 177
Query: 409 GAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+P + S L HEA+ ++++E + Y + +G + A++L+V GF+
Sbjct: 178 YMLAVPELSSDTLDATLTHEASIGRLAEEEVNYLVSKGFKRDEAVSLLVKGFIS 231
>gi|89574328|gb|ABD77381.1| ORF470 [Plasmodium chabaudi chabaudi]
Length = 212
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 18 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 77
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 78 CPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDV 123
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 124 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 183
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+GSF YI K ++C LSTYF+ N
Sbjct: 184 EGSFCYISKYIKCNFNLSTYFKTNSYDFA 212
>gi|89574334|gb|ABD77384.1| ORF470 [Plasmodium vinckei brucechwatti]
Length = 206
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 14 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 73
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 74 CPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDV 119
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDSVS++ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 120 IFDSVSILHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 179
Query: 198 DGSFVYIPKGVRCPMELSTYFRINE 222
+GSF YI K ++C LSTYF+ N
Sbjct: 180 EGSFCYISKYIKCNFNLSTYFKTNS 204
>gi|89574324|gb|ABD77379.1| ORF470 [Plasmodium chabaudi adami]
gi|89574326|gb|ABD77380.1| ORF470 [Plasmodium chabaudi chabaudi]
Length = 213
Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 19 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 78
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 79 CPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDV 124
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 125 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 184
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+GSF YI K ++C LSTYF+ N
Sbjct: 185 EGSFCYISKYIKCNFNLSTYFKTNSYDFA 213
>gi|89574338|gb|ABD77386.1| ORF470 [Plasmodium vinckei lentum]
Length = 213
Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 19 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 78
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 79 CPNINYDNIIYYSSILKDSNLLLYLKANLNI--------------NFLDTILIKNNSIDV 124
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 125 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 184
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+GSF YI K ++C LSTYF+ N
Sbjct: 185 EGSFCYISKYIKCNFNLSTYFKTNSYDFA 213
>gi|222111514|ref|YP_002553778.1| sufbd protein [Acidovorax ebreus TPSY]
gi|221730958|gb|ACM33778.1| SufBD protein [Acidovorax ebreus TPSY]
Length = 415
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 96/296 (32%), Gaps = 15/296 (5%)
Query: 192 NSAVFTDGSFVYIP-KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+ A+ G + + R + + ++ + G +E P
Sbjct: 110 HRALCRRGLRLRVAATPGREREPVRLELHHQPGAAAEAPLLVLDVEAGVQCVLIETHERP 169
Query: 251 Q--RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
+ A +++ V D + + + + +
Sbjct: 170 AADGLSAVAQNLHAHIRLAQGARLQHLRVAAPLADDRMAHHLQVHVASGAAYAQALVATG 229
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
+ L+ L+G + ++ + ++D T A S++ +
Sbjct: 230 ASYHLQRS--------HITLQGAGASARQAALLLVADG-KLDQQTHTELQAAQAVSQVET 280
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
++ G ++ + G+ + + + + P++E + + H
Sbjct: 281 LALAQGRAHAVANAYTRIAPGSDGADVRQRLAGVPLAGQPRLILRPHLEILHDNVQAAHG 340
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISL 484
AT + ++ LFY QRG+ + AA ALI+ G + +L + A E +++ L
Sbjct: 341 ATWGALPEDALFYARQRGLDDAAARALIIEGMAQALLDRC---LAAEGDGMLEQWL 393
>gi|89574340|gb|ABD77387.1| ORF470 [Plasmodium vinckei petteri]
Length = 213
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 19 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFE 78
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 79 CPNINYDNIIYYSSILKDSNLLLYLKANLNI--------------NFLDTILIKNNSIDV 124
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 125 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 184
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+GSF YI K ++C LSTYF+ N
Sbjct: 185 EGSFCYISKYIKCNFNLSTYFKTNSYDFA 213
>gi|241764801|ref|ZP_04762808.1| SufBD protein [Acidovorax delafieldii 2AN]
gi|241365678|gb|EER60390.1| SufBD protein [Acidovorax delafieldii 2AN]
Length = 413
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/364 (15%), Positives = 127/364 (34%), Gaps = 16/364 (4%)
Query: 110 RTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEH 169
T+ L P + + +++ V DA + + T + +A +
Sbjct: 26 ETFRHLPPPGADLWLGEAAESTAVGCDAPPLAGAGWTLHPFGDTPQSGVHARWLDA-SDP 84
Query: 170 PDLVKKYLSTVVPVGDNFYAALNS--AVFTDGSFVYIPKGVRCP--MELSTYFRINEKGT 225
+ + +P + + A+ G + + + + R + +
Sbjct: 85 AQRTELFAGLPLPGEGDAAPFAWAHRALCRQGLRLQVGSASGADAGRTVWLHLRHQPRAS 144
Query: 226 GQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELV--ALDNAEIKYSTVQNWYPG 283
+ ++ EG LE + A + + A +++ V G
Sbjct: 145 VEAPLLVVEVQEGVRCVLLETHEREPAQCGRRLAQNLHIHLQIRQGATLQHLRVATPDAG 204
Query: 284 DSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAIS 343
D I + V R D G ++ + +GS + L+G + + ++
Sbjct: 205 DQ-----IAHIVQARVDQGGHYAQ---ALVASGSPYHLQRTVLELQGSHAHARTAGVLLA 256
Query: 344 NGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLL 403
G ++ H A +T S + + +++G ++ + GA + + +
Sbjct: 257 RGA-ALEQQVHTTHHAAHTHSAVEALVLASGHAHTVVNAHTVIAPGADEAAVRQRLSGIP 315
Query: 404 IGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
I P++E + + H AT + ++ LFY QRG+ E +A ALI+ G
Sbjct: 316 IEGRPRLVLRPHLEIHHDNVQAAHGATWGALPEDALFYARQRGLDESSARALIIEGMATA 375
Query: 464 VLQK 467
+L++
Sbjct: 376 LLER 379
>gi|332159231|ref|YP_004424510.1| hypothetical protein PNA2_1591 [Pyrococcus sp. NA2]
gi|331034694|gb|AEC52506.1| hypothetical protein PNA2_1591 [Pyrococcus sp. NA2]
Length = 368
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 88/233 (37%), Gaps = 7/233 (3%)
Query: 231 TLIIADEGSYVSYLEGCTAPQRDENQLHAAVVEL-VALDNAEIKYSTVQNWYPG--DSQG 287
LII S +++ + + + ++ + ++ + + ++N +
Sbjct: 111 PLIIVSHLSRRAFVSHHVSIEVENARVPIVIYDIAENGVKSLVVELIIRNGEVELLNVGR 170
Query: 288 KGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQ 347
+ +++ + +S+I G ++ L GE S + I+ G
Sbjct: 171 HENLSHYLLRTSLIG--KSQIRVFTAINGGRMSHHREDYFLEGEGSKLILRGLPITIGR- 227
Query: 348 QIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNN 407
D T +L KN+ S I G S +RG + A ++ + + ++
Sbjct: 228 SADYLTNVLQSGKNSMSDIRVHGFSYKRGWTIHRGVARILESAKNASSGVVSEITIMDEG 287
Query: 408 CGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
++P +E + H ++ ++ + LFY RGI ++ I L++ G
Sbjct: 288 SLGVSVPMLEVDTDNIEGAFHSSSVKQLDEYALFYLRSRGIDQKETIKLLIQG 340
>gi|148654970|ref|YP_001275175.1| SufBD protein [Roseiflexus sp. RS-1]
gi|148567080|gb|ABQ89225.1| SufBD protein [Roseiflexus sp. RS-1]
Length = 331
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 11/257 (4%)
Query: 206 KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELV 265
G + F + + Q G+ V +L CT P + H ++
Sbjct: 82 PGACLDRPVHLCFGMLPETGTQRIIAEYEIGAGAQVEFLAHCTFPN-ARDLQHTMEAQVH 140
Query: 266 ALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPS 325
+ A ++Y+ G G + T T +
Sbjct: 141 VGEGACLRYT------EAHYHGPYGGVVVEACADVAVAAGGRYFSTFSLTHGRVGRLLID 194
Query: 326 CLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKV 384
+ + S+ G I+ + + ++ +++ R
Sbjct: 195 YTADVDDSGVVDLASMVYGTGNDDIEVREAVRLNGRGARGLAKTRIAVRDQAHS--RVFT 252
Query: 385 SVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQ 444
+ A +R C + ++ N A +P + +N ++ HEA ++ + L +
Sbjct: 253 TAEGNAPGTRGHMDC-AEIVRGNAVAKNVPTVIVRNDGAHVTHEAAIGSVNQKELETLMA 311
Query: 445 RGIPEEAAIALIVNGFV 461
RG+ E+ A+ +I+ G +
Sbjct: 312 RGLDEDTAVDVIIRGML 328
>gi|89574336|gb|ABD77385.1| ORF470 [Plasmodium vinckei lentum]
Length = 204
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + K P W+
Sbjct: 10 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLNFLNIFKLPDWSFFE 69
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 70 CPNINYDNIIYYSSILKDSNLLLYLKANLNI--------------NFLDTILIKNNSIDV 115
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+SV+ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 116 IFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 175
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+GSF YI K ++C LSTYF+ N
Sbjct: 176 EGSFCYISKYIKCNFNLSTYFKTNSYDFA 204
>gi|332159353|ref|YP_004424632.1| hypothetical protein PNA2_1713 [Pyrococcus sp. NA2]
gi|331034816|gb|AEC52628.1| hypothetical protein PNA2_1713 [Pyrococcus sp. NA2]
Length = 314
Score = 97.8 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 87/261 (33%), Gaps = 13/261 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
I V P + + Q II + S V + C P +N H A+ +
Sbjct: 66 IEDNVELPFPVHLCTGYLKSDGYQRTIFNIIIGKNSKVKFTSHCIFP-YAKNFTHEAMSK 124
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ + + + Y G T+ G R ++ L+ +
Sbjct: 125 ITVGEGSTVIYEDEHIHGEGVKMISR------TEVEVKSGGRYTGKFSLLKHRAREVKLE 178
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSN-NTYRG 382
L + E S + ++ + + I S ++ S N
Sbjct: 179 TIVKLSNKAI-AELTSKIKAVKDDIVEIREVLWLEGAYSRGEIKSTVVAFDNSKVNVMNE 237
Query: 383 KVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYC 442
V A + +C ++ G T+P + +N L HEA+ +I++ L
Sbjct: 238 AYGVGDYA---KGHIECHEIVKG-KADVQTVPLLRVRNEKVELTHEASIGRINEFQLIQL 293
Query: 443 LQRGIPEEAAIALIVNGFVRE 463
+ +G+ EE A I+ G +R+
Sbjct: 294 MAKGLSEEEATDFIIKGLLRD 314
>gi|14601571|ref|NP_148111.1| FeS assembly protein SufD [Aeropyrum pernix K1]
gi|5105394|dbj|BAA80707.1| FeS assembly protein SufD [Aeropyrum pernix K1]
Length = 391
Score = 97.5 bits (241), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 93/258 (36%), Gaps = 18/258 (6%)
Query: 229 ERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGK 288
+I EG+ + L VVE +AE++ + + +
Sbjct: 149 HHVVIEVGEGAKGEII---YIDYSVSPGLKTTVVEARMGRDAEVEVTNIVLHGSRSA--- 202
Query: 289 GGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQ 348
+Y RG ++ + L +G +T LL G S + + ++
Sbjct: 203 --VYTL---RGFEVLDKASLEQYYLISGGRMTRFQDDNLLDGRLSSLKALASTVARPNTA 257
Query: 349 IDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNC 408
D LH + + ++G+ G RG + A + + + L+
Sbjct: 258 SDVIISSLHNGPESDGEVRARGVVVGNGYLAQRGVAMLGETARLAASEVESYIFLLSEKG 317
Query: 409 GAHTIPYIESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGF--VREVL 465
+ +P +E H A + ++++ +FY RG+ ++ + L++ G VL
Sbjct: 318 KGYAVPVLEIHTGEITRAGHSAAVASLAEDTIFYLKSRGLDDKDIVTLVMEGITRFSGVL 377
Query: 466 QKLPMEFAVEAQKLIDIS 483
+K+ + F LI++
Sbjct: 378 EKMEIPF----NWLINLE 391
>gi|325294786|ref|YP_004281300.1| SufBD protein [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065234|gb|ADY73241.1| SufBD protein [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 307
Score = 95.9 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/315 (14%), Positives = 99/315 (31%), Gaps = 16/315 (5%)
Query: 150 EELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTD--GSFVYIPKG 207
++L + + + + +++ + VV L V D + +
Sbjct: 5 DKLLNNILSLGLPEDVLKNPSIVIEGH--KVVKEVPYPGILLEKKVLDDRIKVSLKVLPN 62
Query: 208 VRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVAL 267
+ + G + I E S V + C +N H +
Sbjct: 63 ITVEKPVHMCLSKLSPGDQLID-ITIDIGENSKVKMVSHCAFKG--KNIKHISRTNFRVR 119
Query: 268 DNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGS-AITWKYPSC 326
A ++ S + I G S S ++++ + +
Sbjct: 120 KGASLEVSEIHYHEKD-----IDILIDAKSEGVVEEKGSYKSLFKIDSNNAGKVRIEYTV 174
Query: 327 LLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSV 386
+ + + + + I M K + + S+ ++ G + + G+
Sbjct: 175 DIL-DYATADIETKIAGRDGDDIYVKDIMYLKGKYSKAIAKSRLMALGNTKAEFYGETYG 233
Query: 387 HRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRG 446
+SR C ++ GN IP + N + + HEA I + L + +G
Sbjct: 234 FGD--YSRGHIDCSEIVRGNEVTVKAIPIVVVNNETAKVTHEAAVGSIDKKQLETLMAKG 291
Query: 447 IPEEAAIALIVNGFV 461
+ E+ A+ +IV G +
Sbjct: 292 LDEDEAVDVIVKGML 306
>gi|242399667|ref|YP_002995092.1| Membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sibiricus MM 739]
gi|242266061|gb|ACS90743.1| Membrane subunit of an iron-regulated ABC-type transporter
[Thermococcus sibiricus MM 739]
Length = 316
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 90/268 (33%), Gaps = 19/268 (7%)
Query: 200 SFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHA 259
+ + I + + + Q I +GS V +L C P ++ H
Sbjct: 64 AEIKIKDNIELSFPIHLCTGFLKSEGYQRVIFDITVGKGSKVKFLSHCIFP-YAKDFTHD 122
Query: 260 AVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAI 319
A ++ + A + Y G V ++G G S I +
Sbjct: 123 AYAKIRIDEGASVIYEDEHVHGEGVRMISITEVE-VRRKGRYTGKFSLIKH-----RAKE 176
Query: 320 TWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNT 379
+ + + E S + ++ ++ + + + I+ +
Sbjct: 177 LKLEMKADID-DYAVTELSSKVKAVKDDSVEIKEVAYLTGAHSRANLKTTVIAFDNAKAN 235
Query: 380 YRGKVSVHRGAAH----SRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKIS 435
V A S+ +C ++ G T+P + KN L HEA+ +I+
Sbjct: 236 ------VVNEAYGLGEYSKGHIECHEIVKGE-ADVQTVPLLRVKNDKAELTHEASIGRIN 288
Query: 436 DEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ L + +G+ EE A LI+ G +R+
Sbjct: 289 EAQLMQLMAKGLTEEEAAELIIKGLLRD 316
>gi|319789426|ref|YP_004151059.1| SufBD protein [Thermovibrio ammonificans HB-1]
gi|317113928|gb|ADU96418.1| SufBD protein [Thermovibrio ammonificans HB-1]
Length = 316
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 88/262 (33%), Gaps = 10/262 (3%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
VY+ G + ++ F E Q I+ EG+ V + + A H
Sbjct: 64 VYVEPGTKLEEPVTLCFGAAETTEVQTTEGEIVVGEGADVKF-QVYGAMAEGIKLKHKNK 122
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITW 321
+++ NA ++ + G+ T+ G + +T
Sbjct: 123 LKVRVEKNARFEFLDLH------YNGEETFVELETETEAYVGENAYFRSVFKQTRGRAGR 176
Query: 322 KYPSCLLR-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTY 380
+ ++ F + I +I + + + S+ I+ + T+
Sbjct: 177 VRIVLRAKVDKKGVAVFETKMIGKKDDEIYVEDVIHLEGEESRGISKSRIIAVDQTKATF 236
Query: 381 RGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLF 440
G+ R C ++ G + +P + + + + HEA I + L
Sbjct: 237 VGETY--GNGPKCRGHIDCSEIIRGKDVTVKAVPVVVVNDETAKVTHEAAIGSIDKKQLE 294
Query: 441 YCLQRGIPEEAAIALIVNGFVR 462
+ RG+ E+ A+ +IV G +R
Sbjct: 295 TLMARGLSEDEAVDVIVQGMLR 316
>gi|323222900|gb|EGA07251.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
Length = 50
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
FYCLQRGI EE AI++IVNGF ++V +LP+EFAVEAQKL+ ISLE SVG
Sbjct: 1 FYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 50
>gi|89574332|gb|ABD77383.1| ORF470 [Plasmodium vinckei vinckei]
Length = 213
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 18 QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIR 77
YKY + I + GLN+++I+ +S ++ ++++ + + K P W+
Sbjct: 19 NYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYVYFFIYKFKIYSLKFLNIFKLPDWSFFE 78
Query: 78 YPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDA 137
P I++D++ YY++ + + L + ++D
Sbjct: 79 CPNINYDNIIYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDV 124
Query: 138 VFDSVSVVTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFT 197
+FDS+S++ T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F+
Sbjct: 125 IFDSISILHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFS 184
Query: 198 DGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+GSF YI K ++C LSTY + N
Sbjct: 185 EGSFCYIAKYIKCNFNLSTYLKTNSYDFA 213
>gi|26554200|ref|NP_758134.1| hypothetical protein MYPE7440 [Mycoplasma penetrans HF-2]
gi|26454209|dbj|BAC44538.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
Length = 206
Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 65/183 (35%), Gaps = 4/183 (2%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+ + ++ + L + ++ N + H
Sbjct: 19 IYLDSNENLELSIIDIIKDDVYVDLDIYLL--NNSTFHLVVSSLNDNFDKTFNINVHHQG 76
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+TS GI+ S+ + + + + + + +L+ ++ P +
Sbjct: 77 NQSTSICEVFGINKNHSSTKFYLQAYIKDDSKDNYCEQKIRGVLLSDHAEIQGKPNLIID 136
Query: 420 NSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKL 479
++ +H +++ HLFY +GI + AI L++ + +L K+ E + E +L
Sbjct: 137 TNNIKAKHALAIGRLNLAHLFYLQNKGIKKSDAIKLLLLSYFNVILYKIEDEHSRE--RL 194
Query: 480 IDI 482
++
Sbjct: 195 MER 197
>gi|961501|dbj|BAA09847.1| unknown [Shigella dysenteriae]
Length = 103
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 72/103 (69%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 223 KGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYP 282
TGQFERT+++ADE SYVSY+EGC+AP RD QLHAAVVE+ NAE+KYSTVQNW+P
Sbjct: 2 GKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVTIHKNAEVKYSTVQNWFP 61
Query: 283 GDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPS 325
GD+ GGI NFVTK C G SK+SWTQ ETGSAITWKYPS
Sbjct: 62 GDNN-TGGILNFVTKCALCEGENSKMSWTQSETGSAITWKYPS 103
>gi|317504204|ref|ZP_07962198.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella salivae DSM 15606]
gi|315664693|gb|EFV04366.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella salivae DSM 15606]
Length = 318
Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/333 (17%), Positives = 120/333 (36%), Gaps = 31/333 (9%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I+ SA EP + R A+ + P+ RY + D+ AP +
Sbjct: 16 DAIKRHSA---EP--LNAVRDRAFNDFKAQGFPTRKVERY---KYTDMAALFAPNYGLNL 67
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
L + + ++ V ++ + + GVI
Sbjct: 68 NRL-AIPVDPYEAFK------------CDVPNLSTSLYFIINDTFYTKMLPSAHLPEGVI 114
Query: 159 FMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYF 218
+ E PD + KY + + ++ ALN+ + DG VY+PK V+ +
Sbjct: 115 IDSLCHVATEKPDFIAKYYAKLANTQEDGITALNTMLAQDGLLVYVPKNVKTDRPIQVIN 174
Query: 219 RINEKGTGQFERT-LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTV 277
+ R LII ++ + +L C D L V+E+ + A ++ + +
Sbjct: 175 MLRADVDLMVNRRVLIIMEQNAEAKFLF-CDHAADDRRFLSTQVIEVYVDEYAHLELNCL 233
Query: 278 QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEF 337
+ + +++ +Y + S+++ + + +T + +GE +
Sbjct: 234 EETHFKNTRVS-NVY-------IEQQANSRVNHNVITLHNGVTRNRLDLVFKGEGAECHC 285
Query: 338 YSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+++ Q +D+ T + H + TS + K
Sbjct: 286 NGCVVADKQQHVDNNTLIDHQVPHCTSNELYKY 318
>gi|315231179|ref|YP_004071615.1| Fe-S cluster assembly SufD-like protein [Thermococcus barophilus
MP]
gi|315184207|gb|ADT84392.1| Fe-S cluster assembly SufD-like protein [Thermococcus barophilus
MP]
Length = 366
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 2/158 (1%)
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G +++ + + ++ L G +S + I+ G +D T +L + +
Sbjct: 182 GGGTRVKAFTVISAGEMSHHREDYSLEGAKSELILRGMPIAIGS-SVDYLTNVLQYGERS 240
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
S G S +RG V A +S + ++ ++P +E
Sbjct: 241 KSETRVHGFSYENGWTVHRGVAKVLESARNSSSGVISQVTIMDEGSLGVSVPMLEVDTGE 300
Query: 423 CN-LEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNG 459
H + + ++ LFY RG+ + A++L V+G
Sbjct: 301 IESAFHSSAVRQFDEDALFYLRSRGLDSDEAMSLFVHG 338
>gi|289612594|emb|CBI60079.1| unnamed protein product [Sordaria macrospora]
Length = 89
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 74/89 (83%), Positives = 79/89 (88%)
Query: 251 QRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
RDENQLHAAVVELVALD+AEIKYSTVQNWYPGD GKGGIYNFVTKR C+G SK+SW
Sbjct: 1 MRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRALCQGKNSKVSW 60
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYS 339
TQ+ETGSAITWKYPSC+L GE S GEFYS
Sbjct: 61 TQVETGSAITWKYPSCVLAGENSVGEFYS 89
>gi|121595173|ref|YP_987069.1| SufBD protein [Acidovorax sp. JS42]
gi|120607253|gb|ABM42993.1| SufBD protein [Acidovorax sp. JS42]
Length = 415
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 91/279 (32%), Gaps = 12/279 (4%)
Query: 192 NSAVFTDGSFVYIP-KGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAP 250
+ A+ G + + R + + ++ + G +E P
Sbjct: 110 HRALCRRGLRLRVAATPGREREPVRLELHHQPGAAAEAPLLVLDVEAGVQCVLIETHERP 169
Query: 251 Q--RDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKI 308
+ A++++ V D + + + + +
Sbjct: 170 AAAGLSAVAQNLHAHIRLAQGAQLQHLRVAAPLADDRVAHHLQVHVASGAAYAQALVATG 229
Query: 309 SWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVS 368
+ L+ L+G + ++ + ++D T A S++ +
Sbjct: 230 ASYHLQRS--------HITLQGAGASARQAALLLLADG-KLDQQTYTDLQAAQAVSQVET 280
Query: 369 KGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHE 428
++ G ++ + G+ + + + + P++E + + H
Sbjct: 281 LALAQGRAHAVANAYTRIAPGSDGADVRQRLAGVPLAGQPRLILRPHLEILHDNVQAAHG 340
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQK 467
AT + ++ LFY QRG+ + AA ALI+ G + +L +
Sbjct: 341 ATWGALPEDALFYARQRGLDDAAARALIIEGMAQALLDR 379
>gi|327398720|ref|YP_004339589.1| SufBD protein [Hippea maritima DSM 10411]
gi|327181349|gb|AEA33530.1| SufBD protein [Hippea maritima DSM 10411]
Length = 319
Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 85/258 (32%), Gaps = 12/258 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
I P+ + +K Q + I + V + C + E H +
Sbjct: 69 IEDNTIIPVPVHLCTGFLKKRGEQILKFNYIIGDNVKVKFKSHCILTK-VEKLHHYMESD 127
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ N+ + Y GG++ T S + ET + +
Sbjct: 128 MYIGKNSFVVY-----EDEHFHDENGGVFV-ETITKMKVDENSYFASKFYETKTRVGRIN 181
Query: 324 P--SCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYR 381
L + + S ID + + ++ S + +
Sbjct: 182 VVMDIELL-KNAKANLESKIYGREDDIIDIREVLRLNGEYSSGIAASTIFATDKTKAHV- 239
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
+ AA++R +C+ ++ G+ T+P ++ + L HEA+ +I+ L
Sbjct: 240 -VNEAYGNAAYARGHIECNEIVKGSGVEVSTLPLLKVLDDKAELTHEASVGRINQAQLET 298
Query: 442 CLQRGIPEEAAIALIVNG 459
+ +G+ E+ A IVNG
Sbjct: 299 LMAKGLTEDEAAEFIVNG 316
>gi|284931548|gb|ADC31486.1| SufB-like domain protein [Mycoplasma gallisepticum str. F]
Length = 212
Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 3/171 (1%)
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
L+ + + + L E S + + K+ HL+ N S +
Sbjct: 29 HLLDIHDSDSNLNINVNLS-ENSSAKVIISTFGINKNKKKYNIKLNHLSNNARSVYQNYV 87
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
++A S + + + + +L+ + P + +++ +H
Sbjct: 88 VAADQSYVSSTITSVIKNKTHQNDTVQEIRGVLLSDEAVVKGEPQLIIDDNNVKAKHAMA 147
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+++ HLFY + +G+ + AI LI+ G+ + + + E E K+I
Sbjct: 148 VGRLNQNHLFYLMAKGVKKAEAIKLILMGYFIKTISII--ESEKERTKMIK 196
>gi|212223998|ref|YP_002307234.1| hypothetical protein TON_0849 [Thermococcus onnurineus NA1]
gi|212008955|gb|ACJ16337.1| hypothetical protein TON_0849 [Thermococcus onnurineus NA1]
Length = 371
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 81/245 (33%), Gaps = 17/245 (6%)
Query: 216 TYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYS 275
+ + I E + + ++V + NAE++
Sbjct: 115 LVVVSHLSEKAFISHHISIEAEDVKAPII-----IHDLSKEGTKSLVVELKAKNAELEIL 169
Query: 276 TVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCG 335
TV + +++ + G R + + +G ++ L G +S
Sbjct: 170 TV--------GKHKSLSHYLLRASLSEGTR--VKAFTVISGGKMSHHREDYSLEGAKSEL 219
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
+ I+ G +D T +L + T S G S +RG V A +S +
Sbjct: 220 ILRGMPIAVGS-SVDYLTNVLQYGERTISETRVHGFSYQNGWAVHRGVAKVFESAKNSVS 278
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIA 454
++ ++P +E H + + ++ LFY RG+ E A+
Sbjct: 279 EVISQITIMDEGSLGVSVPMLEVDTGEIEAAAHSSAVRQFDEDALFYLRSRGLESEEALN 338
Query: 455 LIVNG 459
L ++G
Sbjct: 339 LFIHG 343
>gi|294660351|ref|NP_853060.2| SufB-like domain-containing protein [Mycoplasma gallisepticum str.
R(low)]
gi|284812008|gb|AAP56628.2| SufB-like domain protein [Mycoplasma gallisepticum str. R(low)]
gi|284930538|gb|ADC30477.1| SufB-like domain protein [Mycoplasma gallisepticum str. R(high)]
Length = 212
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 3/171 (1%)
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
L+ + + + L E S + + K+ HL+ N S +
Sbjct: 29 HLLDIHDSDSNLNINVNLS-EYSSAKVIISTFGINKNKKKYNIKLNHLSNNARSVYQNYV 87
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
++ SN + + + + +L+ + P + +++ +H
Sbjct: 88 VADDQSNVSSTITSVIKNKTHQNDTVQEIRGVLLSDEAVVKGEPQLIIDDNNVKAKHAMA 147
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLID 481
+++ HLFY + +G+ + AI LI+ G+ + + + E E K+I
Sbjct: 148 VGRLNQNHLFYLMAKGVKKAEAIKLILMGYFIKTISII--ESEKERTKMIK 196
>gi|20094668|ref|NP_614515.1| ABC transporter membrane protein [Methanopyrus kandleri AV19]
gi|19887829|gb|AAM02445.1| Membrane subunit of an iron-regulated ABC-type transporter
[Methanopyrus kandleri AV19]
Length = 316
Score = 90.5 bits (223), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 95/271 (35%), Gaps = 24/271 (8%)
Query: 199 GSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLH 258
+ + + +G + + Q T +I + + + + C+ P R + +H
Sbjct: 62 VAELVVKEGYEFDEPIHMCVGVPWPEGVQRIVTRLIVEPEAKIQLMSHCSFP-RARDVVH 120
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY-------NFVTKRGDCRGMRSKISWT 311
E + A++K + V G + K +FVT+ G ++ W
Sbjct: 121 EMEAEFEIGEGADVKVTDVHYHGEGGVRLKAKYDVSVKPEASFVTEFRLTEGRVGELEWE 180
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
+ G + + G ++ + + ++ + + K
Sbjct: 181 MG------ARVEERATMEG-------VARLRAVGEDRVRAVESVRLTGEDARTLLDFKAA 227
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATT 431
+ + G+ + A +R +C S +I ++P + + L HEA
Sbjct: 228 AIDGAFVELVGE--ISGEADGARGHVEC-SEIIKGGGKVVSVPKLRVVHPGARLTHEAAL 284
Query: 432 SKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+ + + + RG+ EE A+ L+VN +R
Sbjct: 285 GTVEKKEVETLMSRGLSEEEAVELLVNAMLR 315
>gi|169836719|ref|ZP_02869907.1| FeS assembly protein SufD [candidate division TM7 single-cell
isolate TM7a]
Length = 145
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 55/136 (40%)
Query: 305 RSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTS 364
+ K + +E G I L + S + +++ +++D ++ + T
Sbjct: 3 QGKTEYYSVELGGEINAISHKSYLEEDSSEVYVWPAYLADEDRKLDLEYSVVFRGRRTIG 62
Query: 365 RIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCN 424
+ ++G + +RG + +G++ S ++L+ + A +IP +
Sbjct: 63 ELQARGAVKDTAKKVFRGNLYFKQGSSKSEGREGEFAILLNDEIKADSIPTLFCSEDDVI 122
Query: 425 LEHEATTSKISDEHLF 440
EH A+ K+ + LF
Sbjct: 123 GEHAASVGKVDEAKLF 138
>gi|289811063|ref|ZP_06541692.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 93
Score = 90.1 bits (222), Expect = 7e-16, Method: Composition-based stats.
Identities = 56/91 (61%), Positives = 73/91 (80%)
Query: 336 EFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRN 395
EFYS+A+++G QQ D+GTKM+H+ KNT S I+SKGISAG S N+YRG V + A ++RN
Sbjct: 1 EFYSVALTSGHQQADTGTKMIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARN 60
Query: 396 FTQCDSLLIGNNCGAHTIPYIESKNSSCNLE 426
FTQCDS+LIG +CGAHT PY+E +N+S LE
Sbjct: 61 FTQCDSMLIGADCGAHTFPYVECRNNSAQLE 91
>gi|312143138|ref|YP_003994584.1| SufBD protein [Halanaerobium sp. 'sapolanicus']
gi|311903789|gb|ADQ14230.1| SufBD protein [Halanaerobium sp. 'sapolanicus']
Length = 312
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 90/273 (32%), Gaps = 31/273 (11%)
Query: 202 VYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAV 261
V I G + + F + K Q + ++ ++V C P + Q +
Sbjct: 60 VRIKAGYKIKNPVHMCFGVLPKEGRQKIDMQVEVEKNAHVEVRADCVFPNAVKVQH---I 116
Query: 262 VELVALDNAEIKYSTVQNWYPGDSQGKGGIY----------NFVTKRGDCRGMRSKISWT 311
++ V A Y ++ + GD+ G I + VTK +G KI +
Sbjct: 117 MDAVINVQAGGSYIYKEHHFHGDNGGVEVIAKSKINVGPHGHLVTKFDLLKGRCGKIDF- 175
Query: 312 QLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGI 371
+ L + + + + I + + + SK
Sbjct: 176 -----------DYTADLD-DYAKVDMLARISGEKDDVIKIREAAHLNGRGSRGVLDSKIA 223
Query: 372 SAGFSNN-TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEAT 430
+ Y A + C + +I ++ A IP ++ ++ + HEA
Sbjct: 224 IKDKAEAEIYNELT---ADAPEAMGHVDC-TEIIKDHAIARAIPIVDVRHPEAKVTHEAA 279
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNGFVRE 463
+ L + RG+ EE A +I+ G + +
Sbjct: 280 IGSVDSTQLQTLMARGLDEEEASEVIIQGLLND 312
>gi|41614927|ref|NP_963425.1| hypothetical protein NEQ129 [Nanoarchaeum equitans Kin4-M]
gi|40068651|gb|AAR38986.1| NEQ129 [Nanoarchaeum equitans Kin4-M]
Length = 297
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 89/270 (32%), Gaps = 39/270 (14%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
IPK + + +S + + + ++ + + T H
Sbjct: 44 IPKNTKINVPISLVYVSTGENQKVLNKVIVKEGAFAKI-----YTYCTSLNEGYHLGKTI 98
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ ++ + + + Y + ++ + S
Sbjct: 99 AIVK--GHLESAKIHKIDSKSTIVSLNRY---------YVKKGILNNYLISNDS------ 141
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
G + SN + + K L ++ + I TY GK
Sbjct: 142 -----SGNSININKFYGIQSNIGEYVIYKQKEGLLKTDSKAYIKDSVAILKSRVVTYDGK 196
Query: 384 VSVHRGAAHS-RNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE---HEATTSKISDEHL 439
V + + + ++ CD +++G +T+P + ++ HEA+ KI+++ L
Sbjct: 197 VINKTLISGTGKGYSSCDGIILGKG-KIYTMPAL----NTVKEGEYYHEASVGKINEQAL 251
Query: 440 FYCLQRGIPEEAAIALIVNGFVREVLQKLP 469
Y + +GI EE A + + GF+ + LP
Sbjct: 252 LYLMSKGIDEETAKNIYIRGFL---FRDLP 278
>gi|302392758|ref|YP_003828578.1| SufBD protein [Acetohalobium arabaticum DSM 5501]
gi|302204835|gb|ADL13513.1| SufBD protein [Acetohalobium arabaticum DSM 5501]
Length = 315
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 80/255 (31%), Gaps = 11/255 (4%)
Query: 209 RCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALD 268
+ + F + + Q I ++ + V L C P + H E+ D
Sbjct: 70 QIAKPVHLCFGVLPEEGLQQIDMDITVEDDAAVEILAHCVFPN-ARDVTHKMDAEIKVRD 128
Query: 269 NAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLL 328
N+E Y V + G G + S + +
Sbjct: 129 NSEYIYREVHD------HGTSGGVEVIANTDIVMQENSLLKTIFNLFEGRAGLIDIAYES 182
Query: 329 R-GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVH 387
G S E + + QI + N + ++ + +
Sbjct: 183 EIGANSNVEMIAKISGSVDDQIKIKENADLIGVNARGLLETRIALQDQARADI--LNEMT 240
Query: 388 RGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGI 447
AA ++ C + +I + A +P ++ ++ + HEA I L L RG+
Sbjct: 241 AYAAGAKGHVDC-TEIIKDEANARAVPVVDVRHPEAKVTHEAAIGSIDSTQLQTLLARGL 299
Query: 448 PEEAAIALIVNGFVR 462
EE A +I+ G +R
Sbjct: 300 DEEEASDVIIQGMLR 314
>gi|76443834|gb|ABA42616.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|76443838|gb|ABA42619.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|76443842|gb|ABA42622.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|165978534|gb|ABY76713.1| CT686 [Chlamydia trachomatis]
gi|165978540|gb|ABY76718.1| CT686 [Chlamydia trachomatis]
gi|165978546|gb|ABY76723.1| CT686 [Chlamydia trachomatis]
Length = 87
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ + D+LL+ N A T P +E H AT ++ L Y RG A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAHLLTYLRSRGFSLIEAKQ 60
Query: 455 LIVNGFVREVLQK 467
+ F+ ++K
Sbjct: 61 ALQKSFLTLDIEK 73
>gi|76443822|gb|ABA42607.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|76443826|gb|ABA42610.1| ABC transporter membrane protein [Chlamydia trachomatis]
Length = 87
Score = 87.4 bits (215), Expect = 5e-15, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 30/73 (41%)
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ + D+LL+ N A T P +E H AT ++ L Y RG A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFSLIEAKQ 60
Query: 455 LIVNGFVREVLQK 467
++ F+ ++K
Sbjct: 61 VLQKSFLTLDIEK 73
>gi|76443830|gb|ABA42613.1| ABC transporter membrane protein [Chlamydia trachomatis]
gi|165978498|gb|ABY76683.1| CT686 [Chlamydia trachomatis]
gi|165978504|gb|ABY76688.1| CT686 [Chlamydia trachomatis]
gi|165978510|gb|ABY76693.1| CT686 [Chlamydia trachomatis]
gi|165978516|gb|ABY76698.1| CT686 [Chlamydia trachomatis]
gi|165978522|gb|ABY76703.1| CT686 [Chlamydia trachomatis]
gi|165978528|gb|ABY76708.1| CT686 [Chlamydia trachomatis]
Length = 87
Score = 87.1 bits (214), Expect = 7e-15, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ + D+LL+ N A T P +E H AT ++ L Y RG A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGATVGSLNAYLLTYLRSRGFSLIEAKQ 60
Query: 455 LIVNGFVREVLQK 467
+ F+ ++K
Sbjct: 61 ALQKSFLTLDIEK 73
>gi|70915920|ref|XP_732337.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56503110|emb|CAH87074.1| hypothetical protein PC302298.00.0 [Plasmodium chabaudi chabaudi]
Length = 109
Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 394 RNFTQCDSLLIGNNCGAHTIPYIESKNSSCN-LEHEATTSKISDEHLFYCLQRGIPEEAA 452
+ T C S+L+ A IP +E S H AT S + E +F + RGI + A
Sbjct: 1 KLNTLCRSVLLNLGASAVAIPTLEIIPSDIEEANHGATISDLEQEPIFSLMSRGIDTKIA 60
Query: 453 IALIVNGFVREVLQKLPME 471
+++ FV E+L+ +P E
Sbjct: 61 RQIMMKAFVNEILEHIPDE 79
>gi|309388775|gb|ADO76655.1| SufBD protein [Halanaerobium praevalens DSM 2228]
Length = 312
Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 76/262 (29%), Gaps = 13/262 (4%)
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ +G + + F + K Q + ++ + V C P H +
Sbjct: 62 VREGYKIKNPVHMCFGVLPKEGKQIIDMQVEIEKDAAVEVRADCVFPN-AVEVQHIMDAQ 120
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ Y G+ G + K + K+ +
Sbjct: 121 INIAAGGSYIY------QEHHFHGEHGGVEVIAKSDINVKAQGKLVTKFDLLKGRVGKID 174
Query: 324 PSCL-LRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN-TYR 381
E + E + + KN+ + SK + Y
Sbjct: 175 FDYEAQLAEAATVEMLARISGQADDLVKIREAAHLNGKNSRGILDSKIALKDQAKAEIYN 234
Query: 382 GKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFY 441
AA + C + +I + A IP ++ ++ + HEA + L
Sbjct: 235 ELT---ADAAGAMGHVDC-TEIIKDQAIARAIPIVDVRHPGAKVTHEAAIGSVDSTQLQT 290
Query: 442 CLQRGIPEEAAIALIVNGFVRE 463
+ RG+ EE A +I+ G + +
Sbjct: 291 LMARGLDEEDASEVIIQGLLND 312
>gi|320197864|gb|EFW72472.1| Iron-sulfur cluster assembly protein SufD [Escherichia coli
EC4100B]
Length = 68
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
H AT +I DE +FY RGI ++ A +I+ F E+ + L E
Sbjct: 2 KCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDE 49
>gi|119720113|ref|YP_920608.1| SufBD protein [Thermofilum pendens Hrk 5]
gi|119525233|gb|ABL78605.1| SufBD protein [Thermofilum pendens Hrk 5]
Length = 364
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 2/154 (1%)
Query: 303 GMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNT 362
G S + + + + LRG S + +A+S T + + +
Sbjct: 175 GEGSALQESVVAVSGRALYADLKASLRGGGSSLDSSILAVSPREAHASLNTDVAVESPRS 234
Query: 363 TSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSS 422
++ I G SA ++G V + RG+ ++R + + + + P +E ++
Sbjct: 235 SALIRLVGASADGFLA-HKGAVKIVRGSVNARGRLSSRLIPLTPSSKVYASPTLEIESDD 293
Query: 423 CN-LEHEATTSKISDEHLFYCLQRGIPEEAAIAL 455
+H A+ S + + +FY RG E+ A+ L
Sbjct: 294 AEEAQHSASQSPVDPQRIFYLRSRGFTEQEALRL 327
>gi|76443818|gb|ABA42604.1| ABC transporter membrane protein [Chlamydia trachomatis]
Length = 87
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 28/73 (38%)
Query: 395 NFTQCDSLLIGNNCGAHTIPYIESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIA 454
+ + D+LL+ N A T P +E H A ++ L Y RG A
Sbjct: 1 AYQKHDTLLLSNRASASTFPRLEILTDDVKASHGAAVGSLNAYLLTYLRSRGFSLIEAKQ 60
Query: 455 LIVNGFVREVLQK 467
+ F+ ++K
Sbjct: 61 ALQKSFLTLDIEK 73
>gi|291540789|emb|CBL13900.1| hypothetical protein RO1_36500 [Roseburia intestinalis XB6B4]
Length = 107
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL EDI++ IS +K++P WM E+R+ + + + M+ P W +D D + Y PK+
Sbjct: 11 GLTEDIVQKISDEKDDPVWMREFRMKSLQIYRQMQIPDWGPP-IDGLDMDHIETYVRPKT 69
Query: 95 IVGPQSLD 102
+ + +
Sbjct: 70 KMRGKWSE 77
>gi|291535553|emb|CBL08665.1| hypothetical protein ROI_15380 [Roseburia intestinalis M50/1]
Length = 107
Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 35 GLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKS 94
GL EDI++ IS +K++P WM E+R+ + + + M+ P W +D D + Y PK+
Sbjct: 11 GLTEDIVQKISDEKDDPVWMREFRMKSLQIYRQMQIPDWGPP-IDGLDMDHIETYVRPKT 69
Query: 95 IVGPQSLD 102
+ + +
Sbjct: 70 KMRGKWSE 77
Score = 37.7 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 451 AAIALIVNGFVREVLQKLPM 470
A ++IVNGF +V ++LP
Sbjct: 77 EARSMIVNGFADDVSKELPD 96
>gi|89574342|gb|ABD77388.1| ORF470 [Plasmodium vinckei petteri]
Length = 182
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 26 NIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDD 85
I + G+N+++I+ +S ++ ++++ + + K P W+ P I++D+
Sbjct: 1 KINLYLIRNGINKNLIKKLSNNNLFIFFIYKFKIYSLKFLNIFKLPEWSFFECPIINYDN 60
Query: 86 LYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVV 145
+ YY++ + + L + ++D +FDS+S++
Sbjct: 61 INYYSSILKDSNLLLYLKTNLNI--------------NFLDTILIKNNSIDVIFDSISIL 106
Query: 146 TTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIP 205
T + LKK G+IF+ + + I ++P L+KKYL TVV DNF+A +NS +F++GSF YI
Sbjct: 107 HTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFSEGSFCYIS 166
Query: 206 KGVRCPMELSTYFRIN 221
K ++C LSTYF+ N
Sbjct: 167 KYIKCNFNLSTYFKTN 182
>gi|327312022|ref|YP_004338919.1| SufBD protein [Thermoproteus uzoniensis 768-20]
gi|326948501|gb|AEA13607.1| SufBD protein [Thermoproteus uzoniensis 768-20]
Length = 375
Score = 81.7 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 2/173 (1%)
Query: 285 SQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISN 344
+ GG ++V R R S ++ GS + + G +S + + +
Sbjct: 175 ASISGGGPHYVLSRMLVRSNASVVARPLAALGSMNSLIEEYIV-EGTKSSVDVVGLEVGK 233
Query: 345 GFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLI 404
G ++ ++ + R+ I+ S R + + S + + + +
Sbjct: 234 GRSRVHHYVSAVNDGEYGRGRVRLVAIAKDESWVVQRALGRITKRGRWSESIAEGVTYIA 293
Query: 405 GNNCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALI 456
A T P + H A + + +E FY RG E ALI
Sbjct: 294 SKTAVAITQPILYIDTGDVEGARHSAADASLDEEKAFYLRARGFSEADLGALI 346
>gi|290559399|gb|EFD92731.1| ABC-type transport system-like protein [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 116
Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 416 IESKNSSCNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVR 462
+E ++ HEA+ KI+DE LFY RG+ E A+ +IV GF+
Sbjct: 1 MEIDEEESSISHEASVGKINDEQLFYLESRGLSENEAVNMIVLGFIA 47
>gi|119872673|ref|YP_930680.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
gi|119674081|gb|ABL88337.1| SufBD protein [Pyrobaculum islandicum DSM 4184]
Length = 370
Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 98/286 (34%), Gaps = 23/286 (8%)
Query: 173 VKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTL 232
+ + V + A SA+ VY+ R L + + L
Sbjct: 78 LANDIFRQVEINSKILALHASALSEA---VYVGVKSRVE-PLVIKLIADLQRAHVASHLL 133
Query: 233 IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIY 292
+ D+ + S + + + +H AVVE ++Y V G ++
Sbjct: 134 LDVDKSASGSIVVYVES---GVDTMHTAVVEGDV--RGPVEYVLV-----SRGGGPQYVH 183
Query: 293 NFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSG 352
+ ++ R G + +A+ +Y GE++ E + + G +ID
Sbjct: 184 STLSIRSSIYGRP----FVVGGVMNAVREEYI----LGEETYAEVVGLELGLGESRIDHV 235
Query: 353 TKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHT 412
+++ A S ++A S R + + S + + + G+ +T
Sbjct: 236 VSLVNNAPRGRSFAKLYAVAADRSFVAQRAVGRITQRGVGSESSVDGVAYIAGDEAVVNT 295
Query: 413 IPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPEEAAIALIV 457
P I + H A + + +E F+ RGI +E L++
Sbjct: 296 QPVILVETGDVAGARHSAADAALDEEKEFFLRARGIKKEDISRLLI 341
>gi|126458713|ref|YP_001054991.1| hypothetical protein Pcal_0085 [Pyrobaculum calidifontis JCM 11548]
gi|126248434|gb|ABO07525.1| conserved hypothetical protein [Pyrobaculum calidifontis JCM 11548]
Length = 381
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 1/152 (0%)
Query: 330 GEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRG 389
GE++ E + + G +ID +++ A R ++A S T R + +
Sbjct: 210 GEEAVAEAIGLELGLGEARIDHVVSLINDAPRGVGRAKLFAVAADKSFVTQRAVGRITKR 269
Query: 390 AAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIP 448
S + + + G A+T P I + H A + + +E F RGI
Sbjct: 270 GVMSDSSVEGVVFIAGEGAVANTQPIILVETGEVAGARHSAADASLDEEKEFLLRARGIR 329
Query: 449 EEAAIALIVNGFVREVLQKLPMEFAVEAQKLI 480
E L++ FV + L L A ++ +
Sbjct: 330 REDIPKLLIASFVDQYLASLTDTAAEYLRRAV 361
>gi|145590397|ref|YP_001152399.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
gi|145282165|gb|ABP49747.1| SufBD protein [Pyrobaculum arsenaticum DSM 13514]
Length = 369
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 84/248 (33%), Gaps = 21/248 (8%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
L + KG +I A+ + S + + +H AVVE
Sbjct: 113 EPLVVVMSASAKGAHTASHVVIEAEPSAAGSVVVYAETAEGA---MHTAVVEGRLG--GY 167
Query: 272 IKYSTV-QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++Y V + P + V R G ++ + E + G
Sbjct: 168 LEYVLVSRGGGPQYVHSALAVEKSVAARPLAFG--GVMNSVREE------------YVIG 213
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
E + E + + G +ID +++ A ++A S T R + +
Sbjct: 214 EGASAEVVGLELGVGDSRIDHVVSVINDAPRGRGFARLYAVAADRSFVTQRAVGRITKRG 273
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPE 449
A S + + + G+ A+T P I + H A + + ++ F+ RG+ +
Sbjct: 274 AGSNSAVEGVVYIAGDGAVANTQPVILVETGDVEGARHSAADAALDEDREFFLRARGVRK 333
Query: 450 EAAIALIV 457
+ L++
Sbjct: 334 DDLPKLLM 341
>gi|18312286|ref|NP_558953.1| hypothetical protein PAE0932 [Pyrobaculum aerophilum str. IM2]
gi|18159731|gb|AAL63135.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 370
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 99/294 (33%), Gaps = 39/294 (13%)
Query: 192 NSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQ 251
+++V + +V I V L E+G ++ +E + S + +
Sbjct: 96 HASVLHEAVYVRIRGRVE---PLIIKLAAFERGFHIASHVVLDVEESAEGSVIIYVES-- 150
Query: 252 RDENQLHAAVVELVALDNAEIKYSTV-QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISW 310
E +H AVVE ++Y + + P + V R G ++
Sbjct: 151 -GEGVMHTAVVEGEVK--GSVEYVLISRGSGPQYVHSSLAVAKSVAARPLALG--GVMNA 205
Query: 311 TQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKG 370
+ E + GE++ E + + G +ID +++ A
Sbjct: 206 VREE------------YIIGERASAEVIGLELGLGESRIDHVVSVINDAPEGRGYARLYA 253
Query: 371 ISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE-HEA 429
++A S + R + + S + + + G A+T P I + H A
Sbjct: 254 VAADKSFVSQRAVGRITKRGVRSESSVEGVVYIAGEGAVANTQPVILVETGDVMGARHSA 313
Query: 430 TTSKISDEHLFYCLQRGIPEEAAIALIV---------------NGFVREVLQKL 468
+ + ++ F+ RG+ E L++ GFV VL+ L
Sbjct: 314 ADAALDEDKEFFLRSRGVRREYLSQLLMLSLADQYLSSLTESSRGFVEAVLRSL 367
>gi|300820181|ref|ZP_07100343.1| hypothetical protein HMPREF9345_05272 [Escherichia coli MS 107-1]
gi|300527269|gb|EFK48331.1| hypothetical protein HMPREF9345_05272 [Escherichia coli MS 107-1]
Length = 60
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 1 MVAVRETVDKVRKIDVD--QYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWR 58
M E D V+ YK GF T + D+ KG+NE+++R ISAK+NEP+WML++R
Sbjct: 1 MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLKFR 60
>gi|255018938|ref|ZP_05291064.1| hypothetical protein LmonF_16566 [Listeria monocytogenes FSL
F2-515]
Length = 138
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 51/141 (36%), Gaps = 17/141 (12%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
+ I + L + + D ++EL GVI
Sbjct: 70 E-----------------ILPEKVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
Query: 159 FMPISEAICEHPDLVKKYLST 179
F I A+ HP+LVKKY
Sbjct: 113 FTDIISAVKNHPELVKKYFMK 133
>gi|221488407|gb|EEE26621.1| sufB/sufD domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 1267
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 48/165 (29%), Gaps = 9/165 (5%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ +V +AE+ + Q + G S Q++ G+
Sbjct: 1057 NSNTRIVLESDAELHHVYDQEQAIDSWHMENL--------SVQMGKNSTYVLRQVDLGAQ 1108
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+A+ NG Q+ HL + + K + G +
Sbjct: 1109 AGRFNLQIEGAESSRHTSL-GLAVLNGHQEHGKYEMFHHLKPRGETTQIMKSLVGGKARA 1167
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+RG++ + R + + +L+ IP +E
Sbjct: 1168 VWRGRIRIERDGIGTAAESLNRVVLLDEGSRCVAIPTLEIIPDDV 1212
>gi|171184609|ref|YP_001793528.1| hypothetical protein Tneu_0125 [Thermoproteus neutrophilus V24Sta]
gi|170933821|gb|ACB39082.1| conserved hypothetical protein [Thermoproteus neutrophilus V24Sta]
Length = 372
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 83/272 (30%), Gaps = 36/272 (13%)
Query: 212 MELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAE 271
L + G+ ++ +E + S + +H AVVE
Sbjct: 115 EPLVVKLVADSPGSHVASHVILEVEESASGSVVVYVEGNVGT---MHTAVVEGEV--RGA 169
Query: 272 IKYSTV-QNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRG 330
++Y V + P + + V R G ++ + E +
Sbjct: 170 VEYVLVSRGGGPQYVHSALAVGSQVYARPLVLG--GVMNAVREE------------YVVA 215
Query: 331 EQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGA 390
+ E + + G +ID +++ A ++A S R +
Sbjct: 216 AGASAEVVGMELGYGESRIDHVVSVVNDAPKGRGFARLYAVAADRSFVAQRAVGRITPRG 275
Query: 391 AHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSCNLE-HEATTSKISDEHLFYCLQRGIPE 449
A S + + + G A++ P I + H A + + +E F+ RG+
Sbjct: 276 AGSESAVEGVVYIAGEGAVANSQPVILVETGDVEGARHSAADAALDEEKEFFLRSRGVRR 335
Query: 450 EAAIALIV---------------NGFVREVLQ 466
E LI+ GF V++
Sbjct: 336 EHIPRLIMASLVDQYLSSLSEGARGFAEAVVR 367
>gi|237833297|ref|XP_002365946.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
gi|211963610|gb|EEA98805.1| sufB/sufD domain-containing protein [Toxoplasma gondii ME49]
gi|221508912|gb|EEE34481.1| sufB/sufD domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 1267
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 48/165 (29%), Gaps = 9/165 (5%)
Query: 259 AAVVELVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSA 318
+ +V +AE+ + Q + G S Q++ G+
Sbjct: 1057 NSNTRIVLESDAELHHVYDQEQAIDSWHMENL--------SVQMGKNSTYVLRQVDLGAQ 1108
Query: 319 ITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNN 378
+A+ NG Q+ HL + + K + G +
Sbjct: 1109 AGRFNLQIEGAESSRHTSL-GLAVLNGHQEHGKYEMFHHLKPRGETTQIMKSLVGGKARA 1167
Query: 379 TYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC 423
+RG++ + R + + +L+ IP +E
Sbjct: 1168 VWRGRIRIERDGIGTAAESLNRVVLLDEGSRCVAIPTLEIIPDDV 1212
>gi|53801478|gb|AAU93941.1| plastid sufB [Helicosporidium sp. ex Simulium jonesi]
Length = 66
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/67 (79%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Query: 273 KYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQ 332
KYSTVQNWY GD QG+GGIYNFVTKRG G R+KISWTQ+ETGSAITWKYPS +L+GE
Sbjct: 1 KYSTVQNWYAGDEQGRGGIYNFVTKRGLA-GDRAKISWTQVETGSAITWKYPSVVLKGEA 59
Query: 333 SCGEFYS 339
S GEFYS
Sbjct: 60 SVGEFYS 66
>gi|261883884|ref|ZP_06007923.1| Cysteine desulfurase activator SufB [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 43
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ E+ A +IV GF+ ++LPME+AVE +LI +EGS+G
Sbjct: 1 VSEQEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG 43
>gi|266624777|ref|ZP_06117712.1| FeS assembly protein SufB [Clostridium hathewayi DSM 13479]
gi|288863347|gb|EFC95645.1| FeS assembly protein SufB [Clostridium hathewayi DSM 13479]
Length = 43
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 447 IPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
+ EE A ALIV+GF +V ++LP+E+AVE LI + ++GS+G
Sbjct: 1 MSEEDARALIVSGFADQVSKELPLEYAVEMNHLIRLEMKGSIG 43
>gi|218883319|ref|YP_002427701.1| ABC transporter, membrane component [Desulfurococcus kamchatkensis
1221n]
gi|218764935|gb|ACL10334.1| ABC transporter, membrane component [Desulfurococcus kamchatkensis
1221n]
Length = 337
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 2/163 (1%)
Query: 300 DCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLA 359
+G S+++ L +I + +G S E + S +++
Sbjct: 157 VEQGDASRLALVALFNTGSILQARVESI-QGAGSSIEKTILVNSTQGSRVEVEDYSYIDN 215
Query: 360 KNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESK 419
+ + + G S RG+ R A+ SR +SL+ A P+++
Sbjct: 216 PSVSVESYIRSRLEGGSIAVLRGRGMASRRASGSRIVYGIESLINDAESTAFMHPFLDIH 275
Query: 420 NSS-CNLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
+++ H A ++ + LFY RG+ + A L+V+GF+
Sbjct: 276 SNNIVEARHYARNYLLTMDKLFYIETRGLKPDEAAMLLVHGFL 318
>gi|320100371|ref|YP_004175963.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
gi|319752723|gb|ADV64481.1| SufBD protein [Desulfurococcus mucosus DSM 2162]
Length = 335
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 2/167 (1%)
Query: 296 TKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSCGEFYSIAISNGFQQIDSGTKM 355
++ +G S+++ T ++ + G+ S I + +++
Sbjct: 149 SEIKVEQGDSSRLTLTAFFKPGSL-MHVVAESRSGKGSALSKTMIIDAASGSRVELEDSS 207
Query: 356 LHLAKNTTSRIVSKGISAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPY 415
++ K G S RGK V RGA S+ +SL+ + P+
Sbjct: 208 RINTPGSSVESYIKARLGGGSIAALRGKGVVARGAVDSKVVYGIESLITDTESKVYMHPF 267
Query: 416 IESKNSSC-NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFV 461
+E + H A I+ + +FY RG+ A L++ GF+
Sbjct: 268 LEINTNRVAEARHYARNYIITLDKVFYMGTRGLDPGEATMLLIRGFM 314
>gi|227872865|ref|ZP_03991174.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227841290|gb|EEJ51611.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 42
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 448 PEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSVG 489
PEE A +LIV+GF V ++LP+E+AVE LI + + G++G
Sbjct: 1 PEEEAKSLIVSGFADSVSKELPLEYAVEMNNLIRLEMVGAIG 42
>gi|309800119|ref|ZP_07694311.1| FeS assembly protein SufD [Streptococcus infantis SK1302]
gi|308116260|gb|EFO53744.1| FeS assembly protein SufD [Streptococcus infantis SK1302]
Length = 123
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 27/137 (19%)
Query: 37 NEDIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIV 96
++ I+ S EP W+ E R A+ + +++ P R+++ + D
Sbjct: 2 TKETIKLFSEMHAEPSWLSELRQKAFDKIESLELPVIERVKFHRWNLGD----------- 50
Query: 97 GPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSG 156
+ + + L + +V EL + G
Sbjct: 51 -GTITESEPSANVPDFTALD---------------SHLKLVQVGTQTVFEQIPVELAEQG 94
Query: 157 VIFMPISEAICEHPDLV 173
V+F A+ E P+LV
Sbjct: 95 VVFTDFHSALEEIPELV 111
>gi|227530406|ref|ZP_03960455.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
gi|227349681|gb|EEJ39972.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
Length = 333
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 103/273 (37%), Gaps = 17/273 (6%)
Query: 96 VGPQSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKS 155
Q P+ L+ L I ++++ LA Q + +A + V+ +
Sbjct: 7 KTVQKASQGQPDWLQKKRSLAIMLQKRFPLANQQQAWLAKWQEPELVTNDESSLLNHDGD 66
Query: 156 GVIFMPISEAICEHPDLVKKYLS-TVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMEL 214
+ +PI+ A+ ++P+L+++ L V DN AL+ A+ G F+Y+P + L
Sbjct: 67 DFVALPINMAVQKYPELLQENLMEKAVRWQDNQLNALHLALMDTGQFIYVPDETKLEKPL 126
Query: 215 STYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKY 274
LII G+ V+ +E A E++ A++K+
Sbjct: 127 KVGLVTRSNN----PHNLIIVGAGAQVTVIEE---SDYKTQSPLFAATEILMGTGAQVKF 179
Query: 275 STVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQSC 334
QN + + ++++ + SK+ + + + L G +
Sbjct: 180 C--QNNHYHGDLVRQAVHSY-------QARGSKLEVEGVIPENQQGYSSFYSFLDGSDAH 230
Query: 335 GEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIV 367
++ Q + T++ +NT++++
Sbjct: 231 WNVQLASMVEADCQQEVVTQVDGYGENTSAQVN 263
>gi|149278436|ref|ZP_01884573.1| FeS assembly protein SufB [Pedobacter sp. BAL39]
gi|149230806|gb|EDM36188.1| FeS assembly protein SufB [Pedobacter sp. BAL39]
Length = 57
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 4 VRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKK 48
++E ++ + + ++YKYGF T+I D PKGLNE +I IS K+
Sbjct: 3 MKEDLNILEQTAQNEYKYGFVTDIDTDVIPKGLNESVIELISKKR 47
>gi|255022760|ref|ZP_05294746.1| hypothetical protein LmonocyFSL_03183 [Listeria monocytogenes FSL
J1-208]
Length = 112
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 17/120 (14%)
Query: 39 DIIRFISAKKNEPDWMLEWRLLAYRRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGP 98
D I S+ NEPDW L+ R A++ + + P + + +F + K V
Sbjct: 10 DFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFVDKTKITRWNFTKFETFIPFKEGVTN 69
Query: 99 QSLDDVDPELLRTYEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVI 158
++L + + L + + D ++EL GVI
Sbjct: 70 ETLPE-----------------KVANLVDLDNKEANFYVQMDERPARLQLQQELVDQGVI 112
>gi|227872864|ref|ZP_03991173.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227841289|gb|EEJ51610.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 261
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 78/264 (29%), Gaps = 13/264 (4%)
Query: 145 VTTFKEELKKSGVIFMPISEAICEHPDLVKKYLSTVVP-VGDNFYAALNSAVFTDGSFVY 203
E K F + + E + S VV +G+ S+
Sbjct: 8 WLKMNESKIKINGAFQSFTPEMEEEATRGEGDFSKVVSGLGEELAGLAKEDGCESISYRI 67
Query: 204 IPKGVRCPMELSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVE 263
+ PM + + E F+ L +EG+ ++ + +
Sbjct: 68 KKDEAKAPMIMHFLYESKENQHSSFQFYL---EEGARLTLFLH-RESEEKAVGSAYLQEK 123
Query: 264 LVALDNAEIKYSTVQNWYPGDSQGKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKY 323
+ NAE+ V + SK+ + +
Sbjct: 124 FILEKNAELNLILVSKFGDAFQSYDDLSLQL--------QESSKVKLSAIHLCGKSAHIG 175
Query: 324 PSCLLRGEQSCGEFYSIAISNGFQQIDSGTKMLHLAKNTTSRIVSKGISAGFSNNTYRGK 383
L G +S E + ++ D + H K + S I G+ G + +RG
Sbjct: 176 YRADLLGNRSEAEMHLGYFLEKQERADYNLLVNHFGKKSESHIYCDGVLRGEAFKIFRGT 235
Query: 384 VSVHRGAAHSRNFTQCDSLLIGNN 407
+ + GA + Q + LL+ +N
Sbjct: 236 IDLKHGAKGACGNEQENVLLMDDN 259
>gi|313607044|gb|EFR83584.1| FeS assembly protein SufD [Listeria monocytogenes FSL F2-208]
Length = 44
Score = 59.7 bits (143), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 443 LQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDISLEGSV 488
+ RGI ++ A L+++GF+ V+++LP+E + ++ +EG V
Sbjct: 1 MSRGISQKEAERLVIHGFLDPVVRQLPIES---VKTMLREVIEGKV 43
>gi|225011995|ref|ZP_03702432.1| Fe-S assembly protein, SufD [Flavobacteria bacterium MS024-2A]
gi|225003550|gb|EEG41523.1| Fe-S assembly protein, SufD [Flavobacteria bacterium MS024-2A]
Length = 189
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 34/187 (18%)
Query: 58 RLLAYRRWLTMKDPS-----WARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTY 112
R+ A + + P+ W + D + ++ V + + TY
Sbjct: 28 RVAALKVFEEKGFPTKKDEAWKYTSLANLINQDYAIFPKDETNVDLKEVKKYFLFDTDTY 87
Query: 113 EKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAI--CEHP 170
+ + I L+ G+ +S A+ ++
Sbjct: 88 KVIFIDGVYSPFLSNTT------------------------HDGIDVCLLSAALSKPKYK 123
Query: 171 DLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQF-- 228
L+ Y + + D+ A LN++ +G+F+YIPK V + K +
Sbjct: 124 KLIDTYFNKIANQEDSMTA-LNTSYAKEGAFIYIPKNVVAEKPIEIIHFSTGKEKAVWLQ 182
Query: 229 ERTLIIA 235
R LI+
Sbjct: 183 PRNLIVV 189
>gi|213025865|ref|ZP_03340312.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 62
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/63 (66%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 232 LIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQGKGGI 291
+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQNW+PGD+ GGI
Sbjct: 1 MLVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNN-TGGI 59
Query: 292 YNF 294
NF
Sbjct: 60 LNF 62
>gi|213420160|ref|ZP_03353226.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 58
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/58 (68%), Positives = 50/58 (86%)
Query: 221 NEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQ 278
N + TGQFERT+++ADEGSYVSY+EGC+AP RD QLHAAVVE++ +AE+KYSTVQ
Sbjct: 1 NAEKTGQFERTILVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQ 58
>gi|227872642|ref|ZP_03990974.1| hypothetical protein HMPREF6123_0913 [Oribacterium sinus F0268]
gi|227841529|gb|EEJ51827.1| hypothetical protein HMPREF6123_0913 [Oribacterium sinus F0268]
Length = 67
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 424 NLEHEATTSKISDEHLFYCLQRGIPEEAAIALIVNGFVREVLQKLPMEFAVEAQKLIDIS 483
H AT ++ ++ +FY RG+ E+ L+ + V+ + Q I+ +
Sbjct: 2 EGNHGATIGRLDEDSVFYMQSRGMDLESTYELMAEARMENVIHSISD---KSIQAYIEET 58
Query: 484 LEGS 487
+ G
Sbjct: 59 IRGK 62
>gi|296243036|ref|YP_003650523.1| hypothetical protein Tagg_1309 [Thermosphaera aggregans DSM 11486]
gi|296095620|gb|ADG91571.1| hypothetical protein Tagg_1309 [Thermosphaera aggregans DSM 11486]
Length = 353
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 372 SAGFSNNTYRGKVSVHRGAAHSRNFTQCDSLLIGNNCGAHTIPYIESKNSSC-NLEHEAT 430
+ S + RG+ ++ A+ +R +S ++ A+ P++E ++ H A
Sbjct: 238 LSKHSTGSVRGRGTISSKASDARLVYGFES-ILEEEAVAYMQPFLEVNSNRVLEARHYAR 296
Query: 431 TSKISDEHLFYCLQRGIPEEAAIALIVNG 459
++ + LFY RG+ A +++ G
Sbjct: 297 NYLVTVDKLFYLATRGLSFSEAKNIVLTG 325
>gi|169836720|ref|ZP_02869908.1| predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [candidate division TM7
single-cell isolate TM7a]
Length = 193
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 53/134 (39%), Gaps = 5/134 (3%)
Query: 154 KSGVIFMPISEAICEHPDLVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPME 213
+ GV+ ISE++ E L + +F+ N A + +G ++ I + +
Sbjct: 57 QDGVVIKNISESLEELEKLKNDNDYGL----GDFFKKQNFAFYNEGKYLKIGERKKIDKP 112
Query: 214 LSTYFRINEKGTGQFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIK 273
+ + N++ + +I + + V+ + + H ++++V N+E+K
Sbjct: 113 IYLNYHTNKENNFLVDYNVIEVADFAKVTVIINY-DSLDETPVYHNGIIKVVTGRNSEVK 171
Query: 274 YSTVQNWYPGDSQG 287
+Q S
Sbjct: 172 IIKIQTLNTKSSNF 185
>gi|169840930|ref|ZP_02874043.1| hypothetical protein cdivTM_27523 [candidate division TM7
single-cell isolate TM7a]
Length = 37
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 439 LFYCLQRGIPEEAAIALIVNGFVREVLQKLPME 471
+FY + RG+ E A LIV R ++ + E
Sbjct: 1 MFYLMSRGLSESRAKKLIVESSFRPIMDNIDDE 33
>gi|213024248|ref|ZP_03338695.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 61
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 42/59 (71%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 175 KYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTGQFERTLI 233
KYL TVV NF+AALN+AV +DG+F+Y+PKGVRCPMELSTYFRIN + TGQFERT++
Sbjct: 1 KYLGTVVR-ERNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTIL 58
>gi|213420009|ref|ZP_03353075.1| cysteine desulfurase activator complex subunit SufD [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 269
Score = 45.1 bits (105), Expect = 0.029, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 81/287 (28%), Gaps = 52/287 (18%)
Query: 56 EWRLL-AYRRWLTM---KDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
E R A + + M P+ ++ + L + I ++ + L
Sbjct: 23 EIRTEQARQHFQQMLRLGLPT---RKHEDWKYTPLEGLTHSQFIQQCATISAAQRDALA- 78
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
L V VD F + + SG E
Sbjct: 79 -------------LQIDAVRLVFVDGRFMPE-----LSDSTQNSGFDVSVRDE------- 113
Query: 172 LVKKYLSTVVPVGDNFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRI-----NEKGTG 226
+ PV + L ++ +++ + + R L +E T
Sbjct: 114 ----RQTLAAPVHPEVFLHLTESLAQCVTYIQVRRNQRPTRPLLLMHITQGVDSDELNTA 169
Query: 227 QFERTLIIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDSQ 286
+ L EG+ + +E + A + + DNA++++ + +
Sbjct: 170 HYRHHL-TLAEGAEATVIEHYVSLT-AAKHFTGARLTMNVADNAQLRHIKL-------AF 220
Query: 287 GKGGIYNFVTKRGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
Y+F S S G+A+ + S L GE +
Sbjct: 221 ENASSYHFAHNDLLLATDASAFSH-SFLLGAAVLRHHSSSQLNGENA 266
>gi|169840929|ref|ZP_02874042.1| hypothetical protein cdivTM_27518 [candidate division TM7
single-cell isolate TM7a]
Length = 43
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Query: 429 ATTSKISDEHLFYCLQRGIPEEAAIAL 455
+ +ISDE +FY + RGI A+ +
Sbjct: 1 SKIGRISDEAIFYLMSRGI----AVKM 23
>gi|224113619|ref|XP_002316523.1| predicted protein [Populus trichocarpa]
gi|222859588|gb|EEE97135.1| predicted protein [Populus trichocarpa]
Length = 84
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 68 MKDPSWARIRYPAIDFDDLY--YYAAPKSIVGPQSLDDVDPELLR 110
MK+P W+ +YP IDF +Y YY+APK SL++ D LL
Sbjct: 1 MKEPRWSYNQYPIIDFQGIYICYYSAPKKKPPLNSLEEADRNLLS 45
>gi|302501560|ref|XP_003012772.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291176332|gb|EFE32132.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 795
Score = 41.2 bits (95), Expect = 0.43, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 2 VAVRETVDKVRKIDVDQYKYGFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLA 61
VA R + K+D ++Y T ++ DK + LN+ II + + E WM + R +
Sbjct: 463 VAERNSRRITDKLDEERYHRFISTQMERDKEVRRLNKKIIDLMHHPEKERRWMQKKR--S 520
Query: 62 YRRWLTMKDP--SWAR 75
Y R+ + ++P +W
Sbjct: 521 YDRYESDEEPVSTWPY 536
>gi|152994877|ref|YP_001339712.1| LmbE family protein [Marinomonas sp. MWYL1]
gi|150835801|gb|ABR69777.1| LmbE family protein [Marinomonas sp. MWYL1]
Length = 445
Score = 40.4 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 79/250 (31%), Gaps = 26/250 (10%)
Query: 58 RLLAYRRWLTMKDPSWARIRYPAI------DFDDLYYYAAPKSIVGPQSLDDVDPELLRT 111
R R W +M P A +++ + + Y PK ++ + P++ RT
Sbjct: 194 RKAQIRAWNSMTTPLLAGVKFERLSSLGYFNLTKESLYQTPKEPQSDKAFPALTPQISRT 253
Query: 112 YEKLGIPIREQEILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMPISEAICEHPD 171
+ L +P EQ I +G + T+ E++K S V+ I HP+
Sbjct: 254 FNTLKLPNDEQNISSGQLLIEDL-----------TSLLEQIKPSTVLVTEPE--IDPHPE 300
Query: 172 LVKKYLSTVVPVGD-----NFYAALNSAVFTDGSFVYIPKGVRCPMELSTYFRINEKGTG 226
+ + + + N + + F Y P+ + + +
Sbjct: 301 HITSAYALALAIDKSSHVPNRVLMYVNHLRKIKKFPYGPEHTKTALAPWYDTKSIFGHYS 360
Query: 227 QFERTL-IIADEGSYVSYLEGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYPGDS 285
+ L I + VS+ + Q + + KY N Y
Sbjct: 361 CYSHQLDINTQKDKVVSFDSMHDLRSKPRIQKMLKKWWHSKILKSHYKYYGYHN-YFLTH 419
Query: 286 QGKGGIYNFV 295
++ FV
Sbjct: 420 IKANEVFTFV 429
>gi|254697311|ref|ZP_05159139.1| hypothetical protein Babob28_06232 [Brucella abortus bv. 2 str.
86/8/59]
gi|256159658|ref|ZP_05457411.1| hypothetical protein BcetM4_11835 [Brucella ceti M490/95/1]
Length = 19
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 18/19 (94%), Positives = 18/19 (94%)
Query: 471 EFAVEAQKLIDISLEGSVG 489
EFAVEAQKLI ISLEGSVG
Sbjct: 1 EFAVEAQKLIGISLEGSVG 19
>gi|213423258|ref|ZP_03356258.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 37
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 26/36 (72%), Positives = 29/36 (80%)
Query: 298 RGDCRGMRSKISWTQLETGSAITWKYPSCLLRGEQS 333
R C G SK+SWTQ ETGSAITWKYPSC+LRG+ S
Sbjct: 1 RALCEGENSKMSWTQSETGSAITWKYPSCILRGDNS 36
>gi|315613315|ref|ZP_07888224.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
gi|315314550|gb|EFU62593.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
Length = 65
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 464 VLQKLPMEFAVEAQKLIDISLEGSVG 489
+L+KL ME+ VE +LI L+ SVG
Sbjct: 8 ILKKLSMEYTVELTRLISNKLKESVG 33
>gi|255322941|ref|ZP_05364079.1| hypothetical protein CAMSH0001_0052 [Campylobacter showae RM3277]
gi|255300003|gb|EET79282.1| hypothetical protein CAMSH0001_0052 [Campylobacter showae RM3277]
Length = 437
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 50/159 (31%), Gaps = 14/159 (8%)
Query: 4 VRETVDKVRKIDVDQYKY-GFETNIQVDKAPKGLNEDIIRFISAKKNEPDWMLEWRLLAY 62
++ + KI +Y++ F + KG EDII K EP+ L + A
Sbjct: 262 TQDDTSTIEKIKYGKYEFKDFLIKTKFSNLDKGAFEDIINA----KGEPEAQLAAIMQAL 317
Query: 63 RRWLTMKDPSWARIRYPAIDFDDLYYYAAPKSIVGPQSLDDVDPELLRTYEKLGIPIREQ 122
+++ P + FD+L + A +DP+ + T L
Sbjct: 318 DKFIKRA---------PKLTFDNLNFKNAAGKSYVSNFEISIDPDGIDTQNLLENIPTAI 368
Query: 123 EILAGVQTSKVAVDAVFDSVSVVTTFKEELKKSGVIFMP 161
++ VF S L G+
Sbjct: 369 NFSGKIELDTTPGGFVFGSGEEKEGIDAMLVNGGLFIEN 407
>gi|309806294|ref|ZP_07700307.1| conserved domain protein [Lactobacillus iners LactinV 03V1-b]
gi|308167278|gb|EFO69444.1| conserved domain protein [Lactobacillus iners LactinV 03V1-b]
Length = 107
Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 42 RFISAKKNEPDWMLEWRLLAYRRWL-TMKDPSWARIRYPAIDF 83
R ++ EP W +E RL A + L + P R ++ F
Sbjct: 10 RQVAYNHQEPAWFIEKRLAAQKLLLNNIDLPKMQRFKFDNWPF 52
>gi|291534070|emb|CBL07183.1| hypothetical protein MHY_26540 [Megamonas hypermegale ART12/1]
Length = 64
Score = 36.6 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Query: 4 VRETVDKVRKIDVDQYKYGFET-NIQVDKAPKGLNEDIIRFISAKK 48
+ +T ++V +Y F+ + KGL +I+ +SAKK
Sbjct: 12 INQTAERVEN------RYDFKKAEKDAYRLKKGLTPEIVEELSAKK 51
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.133 0.385
Lambda K H
0.267 0.0408 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,985,102,508
Number of Sequences: 14124377
Number of extensions: 260781157
Number of successful extensions: 483356
Number of sequences better than 10.0: 3439
Number of HSP's better than 10.0 without gapping: 3379
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 472445
Number of HSP's gapped (non-prelim): 3725
length of query: 489
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 346
effective length of database: 2,823,007,719
effective search space: 976760670774
effective search space used: 976760670774
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 83 (36.6 bits)