RPSBLAST alignment for GI: 254781060 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score = 57.4 bits (139), Expect = 4e-09
 Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 48/228 (21%)

Query: 18  IIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGDILYKGESILDWSIVER 77
            +RG++ +++  E +AI+GP+GSGKSTL+ L+ G      T+G +   G  +  W   +R
Sbjct: 333 TLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPP--TSGSVRLDGADLKQW---DR 387

Query: 78  ASKGIFLAFQYPVEI---PGIIMMQFLKIALNEQRKARNEKELLIPDFTRKV--RKITA- 131
            + G  + +  P ++   PG +              A N     I  F       KI   
Sbjct: 388 ETFGKHIGY-LPQDVELFPGTV--------------AEN-----IARFGENADPEKIIEA 427

Query: 132 -------ELGINM----DMLKRPLNLGFSGGEKKIAEILQMRLL--EPSLCILDETDSGL 178
                  EL + +    D +  P     SGG+++   I   R L  +P L +LDE +S L
Sbjct: 428 AKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQ--RIALARALYGDPKLVVLDEPNSNL 485

Query: 179 DIDALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKI 226
           D +  +  A  + AL+++  + ++ITH   LL  +  D I VL +G+I
Sbjct: 486 DEEGEQALANAIKALKARGITVVVITHRPSLLGCV--DKILVLQDGRI 531