RPSBLAST alignment for GI: 254781060 and conserved domain: TIGR02857

>gnl|CDD|163042 TIGR02857, CydD, thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD. Length = 529

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 60/211 (28%), Positives = 86/211 (40%), Gaps = 23/211 (10%)

Query: 2   LEIKNLRAKIVDTDTEIIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGD 61
           LE   L           +R ++  V P E VA++GP+G+GKSTL  LL G  D   T G 
Sbjct: 321 LEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVD--PTEGS 378

Query: 62  ILYKGESILDWSIVERAS--KGIFLAFQYPVEIPGIIMMQFLKIALNEQRKARNE-KELL 118
           I   G  + D       S    I    Q+P    G I            R AR +  +  
Sbjct: 379 IAVNGVPLADAD---ADSWRDQIAWVPQHPFLFAGTI--------AENIRLARPDASDAE 427

Query: 119 IPDFTRKV--RKITAELGINMDMLKRPLNLGFSGGEKKIAEILQMRLLEPSLCILDETDS 176
           I     +    +  A L   +D L      G SGG+ +   + +  L +  L +LDE  +
Sbjct: 428 IRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTA 487

Query: 177 GLDIDALKIAAQGVNALR--SQDRSFLIITH 205
            LD +     A    ALR  +Q R+ L++TH
Sbjct: 488 HLDAET---EALVTEALRALAQGRTVLLVTH 515