RPSBLAST alignment for GI: 254781060 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 56.3 bits (136), Expect = 7e-09
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 18 IIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGDILYKGESILDWSIVER 77
++ ++ +V E + ++G NG+GKSTL LL+G Y +G + +G R
Sbjct: 37 ALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGI--YPPDSGTVTVRG----------R 84
Query: 78 ASKGIFLAFQYPVEIPGIIMMQFLKIALNEQRKARNEKELLIPDFTRKVRKITAELGINM 137
S + L + E+ G + L RK +EK I +F +ELG
Sbjct: 85 VSSLLGLGGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEF--------SELG--- 133
Query: 138 DMLKRPLNLGFSGGEKKIAEILQMRL-------LEPSLCILDETDSGLDIDALKIAAQGV 190
D + P+ +S G ++ RL LEP + ++DE + D + + +
Sbjct: 134 DFIDLPVK-TYSSG-------MKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRL 185
Query: 191 NALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKIIKTG 230
L Q ++ ++++H + + D VL GKI G
Sbjct: 186 RELLKQGKTVILVSHDPSSIKRL-CDRALVLEKGKIRFDG 224