RPSBLAST alignment for GI: 254781060 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 82.8 bits (205), Expect = 8e-17
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 53/224 (23%)
Query: 2 LEIKNLRAKIVDTDTEIIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGD 61
+E KN+ +++ ++L ++P E VAI+GP+GSGKSTL LL Y+ T+G+
Sbjct: 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRL--YDPTSGE 58
Query: 62 ILYKGESILDWSIVERASKGIFLAFQYPVEIPGIIMMQFLKIALNEQRKARNEKELLIPD 121
IL G + D + I Q P FL
Sbjct: 59 ILIDGVDLRDLDLESLRKN-IAYVPQDP----------FL-------------------- 87
Query: 122 FTRKVRKITAELGINMDMLKRPLNLGFSGGEKKIAEILQMRLLEPSLCILDETDSGLDID 181
F+ +R+ N+ SGG+++ I + L +P + ILDE S LD +
Sbjct: 88 FSGTIRE----------------NI-LSGGQRQRIAIARALLRDPPILILDEATSALDPE 130
Query: 182 ALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGK 225
+ + + AL + ++ ++I H RL D I VL +G+
Sbjct: 131 TEALILEALRALA-KGKTVIVIAH--RLSTIRDADRIIVLDDGR 171