RPSBLAST alignment for GI: 254781060 and conserved domain: cd03251

>gnl|CDD|73010 cd03251, ABCC_MsbA, MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 234
 Score = 77.5 bits (191), Expect = 3e-15
 Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 17/241 (7%)

Query: 2   LEIKNLRAKIVDTDTEIIRGLNLKVEPSEVVAIMGPNGSGKSTLSYLLSGHKDYEITAGD 61
           +E KN+  +       ++R ++L +   E VA++GP+GSGKSTL  L+   + Y++ +G 
Sbjct: 1   VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIP--RFYDVDSGR 58

Query: 62  ILYKGESILDWSIVE-RASKGIFL--AFQYPVEIPGIIMMQFLKIALNEQRKARNEKELL 118
           IL  G  + D+++   R   G+     F +   +   I          E  +A       
Sbjct: 59  ILIDGHDVRDYTLASLRRQIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAH 118

Query: 119 IPDFTRKVRKITAELGINMDMLKRPLNLGFSGGEKKIAEILQMRLLEPSLCILDETDSGL 178
             +F  ++       G +  + +R + L  SGG+++   I +  L +P + ILDE  S L
Sbjct: 119 --EFIMEL-----PEGYDTVIGERGVKL--SGGQRQRIAIARALLKDPPILILDEATSAL 169

Query: 179 DIDALKIAAQGVNALRSQDRSFLIITHYQRLLNYIKPDTIHVLHNGKIIKTGDYSIALDL 238
           D ++ ++    +  L  ++R+  +I H  RL      D I VL +GKI++ G +   L  
Sbjct: 170 DTESERLVQAALERL-MKNRTTFVIAH--RLSTIENADRIVVLEDGKIVERGTHEELLAQ 226

Query: 239 E 239
            
Sbjct: 227 G 227