HHsearch alignment of GI: 254781061 and MMDB domain: 1vh4_A_
>1vh4_A (A:) SUFD protein; structural genomics, protein binding protein; 1.75A {Escherichia coli}
Probab=100.00 E-value=0 Score=649.89 Aligned_cols=415 Identities=23% Similarity=0.335 Sum_probs=371.7
Q ss_pred CCHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC-CCCCCHH
Q ss_conf 3279999999999998617-8877899999999999998283239972474258878977513576443211-1111000
Q gi|254781061|r 4 LTAVETMLLQSCDEACQKY-YRNQSVVAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNSIAT-LQKKYKP 81 (428)
Q Consensus 4 ~t~~~~~l~~~f~~~~~~~-~~~~~~~~~R~~a~~~F~~~G~lPtkK~E~WKyT~l~~l~~~~~~~~~~~~~-~~~~~~~ 81 (428)
|++....+.+.+...++.. ..+.|+.++|++|++.|+++| ||++|+|.|||||++.+....+........ .......
T Consensus 2 m~~~~~~l~~~~~~~~s~~~~ep~wl~~~R~~a~~~~~~l~-~P~~~~e~wryt~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (435)
T 1vh4_A 2 LMAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTG-LPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALA 80 (435)
T ss_dssp ---------CHHHHHHHHHHC---CCCHHHHHHHHHHHHHC-CCCTTSTTCTTCCCHHHHTSCEECCCCCCCHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHCC
T ss_conf 54558887699999999986227747599999999999829-78998708137987997454776557766800210001
Q ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEECCCEEEE
Q ss_conf 01581599983465420004457541005652124201000134555445667887521387487730544770230343
Q gi|254781061|r 82 LVADSIQLSISQQPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQ 161 (428)
Q Consensus 82 ~~~d~~~i~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~f~~LN~A~~~~g~~I~V~~~~~~~~PI~i~ 161 (428)
...+...+++.++.+.+.++.......... ...............++|.+||.|++++|++|+||+++++++||+++
T Consensus 81 ~~~~~~~~~~v~g~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~aln~a~~~~g~~i~v~~~~~~~~Pi~i~ 157 (435)
T 1vh4_A 81 LTLDSVRLVFVDGRYVPALSDATEGSGYEV---SINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLM 157 (435)
T ss_dssp CCCCSEEEEEETTEECGGGSCCCTTSSCEE---EEESCCTTCCCCSSCCHHHHHHHHHCSCEEEEEECTTCCCSSCEEEE
T ss_pred CCCCCEEEEEECCEECCCCCCCCCCCCEEE---ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCEEE
T ss_conf 346760599778888120156755676076---23777753054442257899876230233201014524750453036
Q ss_pred EECCC------CCCCEEEEEECCCCCCEEEEEECCCCCCCCEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEECEEEE
Q ss_conf 20223------222101210017986135553035667552010031289964886376630024565301432000112
Q gi|254781061|r 162 AIQCG------GQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVIL 235 (428)
Q Consensus 162 ~~~~~------~~~~~r~~I~v~~ns~~~iiE~~~~~~~~~~~~n~~~ei~l~~~A~l~~~~iq~~~~~s~~~~~~~~~~ 235 (428)
++..+ ...++|++|++++||+++|+|.|.+.....+|++.++++++++||+|+|+.+|+++..++++...++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~iie~~~~~~~~~~~~~~~~ei~~~~~A~l~~~~i~~~~~~~~~~~~~~~~~ 237 (435)
T 1vh4_A 158 HITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLL 237 (435)
T ss_dssp EEECCCSSSCEEEEEEEEEEEECTTCEEEEEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCTTCEEEEEEEEEE
T ss_pred EEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCHHHHCCCEEEEEECCCCEEEEHHHHHCCCCCCCCCHHHHHH
T ss_conf 75036454444420157899742530345555421221001000421689841443343001343034432120222102
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEC
Q ss_conf 03551467786425651244335665135412466334422744100111222212777526888730004885278741
Q gi|254781061|r 236 EKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQG 315 (428)
Q Consensus 236 ~~~S~~~~~~~~~Gg~~~R~~i~i~L~Ge~a~~~~~g~~l~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G 315 (428)
+++|++++.++.+||+++|+++.+.|.|+||+++++|++++.++|+.|+++.|+|.+|+|+|+|++|||+.|+|+++|+|
T Consensus 238 ~~~a~~~~~~~~~g~~~~~~~~~~~l~g~~a~~~~~g~~~~~~~q~~d~~~~v~h~~~~t~s~~~~k~vl~d~s~~vf~G 317 (435)
T 1vh4_A 238 AEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNG 317 (435)
T ss_dssp CTTCEEEEEEEECCCSEEEEEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCEEEEEE
T ss_conf 35652389864156511110011114400111001102456630364543222015553222002103333686269854
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 01013664100000000046612871798121247713873365542212389999999994688989999999999999
Q gi|254781061|r 316 AVHVSSEAQGSNARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMS 395 (428)
Q Consensus 316 ~i~V~~~a~~t~~~q~~~~llLs~~a~~~s~P~LeI~~ddV~~~Hgatvg~id~e~lfYl~sRGi~~~~A~~lli~gF~~ 395 (428)
+|+|.++|+||+|+|.|++||||++|+++|+|.|||++|||+|+||||||+||+|||||||||||++++|++||+.||++
T Consensus 318 ~i~i~~~A~~s~a~q~~~~LlLs~~A~~~s~P~LeI~~dDV~~sHgAtvG~id~e~LFYL~SRGi~~~~A~~Llv~gF~~ 397 (435)
T 1vh4_A 318 LINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAA 397 (435)
T ss_dssp EEEECTTCTTEEEEEEEEEEECSTTCEEEEEEEEEECCSSEEEEEEEEEECCCHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHEEEECCCCEEEECCEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 40336663166767655406505884166562389963972699402146789899999987699999999999999899
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 998858978999999999999974138
Q gi|254781061|r 396 EIVEDLNDQVLQFSIEEILSSWLKNNS 422 (428)
Q Consensus 396 ~~i~~i~~~~~~~~~~~~i~~~l~~~~ 422 (428)
|++++||++.+|+++.+.|++||....
T Consensus 398 ~vl~~i~~e~lr~~i~~~i~~~l~~~~ 424 (435)
T 1vh4_A 398 ELTEALRDEGLKQQVLARIGQRLPGGA 424 (435)
T ss_dssp HHHTTCCCHHHHHHHHHHHHTTSTTC-
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 999869859999999999998611422