HHsearch alignment of GI: 254781061 and MMDB domain: 1vh4_A_
>1vh4_A (A:) SUFD protein; structural genomics, protein binding protein; 1.75A {Escherichia coli}
Probab=98.42 E-value=0.0002 Score=51.20 Aligned_cols=172 Identities=9% Similarity=-0.013 Sum_probs=120.4
Q ss_pred CEEEEEECCEEECCCEEEEEECCCC---CCCEEEEEECCCCCCEEEEEECCCCCCCCEEECCCEEEEECCCCEEEEEECC
Q ss_conf 7487730544770230343202232---2210121001798613555303566755201003128996488637663002
Q gi|254781061|r 143 GYKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVL 219 (428)
Q Consensus 143 g~~I~V~~~~~~~~PI~i~~~~~~~---~~~~r~~I~v~~ns~~~iiE~~~~~~~~~~~~n~~~ei~l~~~A~l~~~~iq 219 (428)
...|.+.+|.++. |...+...+. ..+..+.|.+++||+++++....... ..+....+.+.++++|.++++.+.
T Consensus 174 ~~~i~~~~~s~~~--iie~~~~~~~~~~~~~~~~ei~~~~~A~l~~~~i~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~ 249 (435)
T 1vh4_A 174 RHHLDLAEGAEAT--VIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENP--LSHHFAHNDLLLAEDATAFSHSFL 249 (435)
T ss_dssp EEEEEECTTCEEE--EEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCT--TCEEEEEEEEEECTTCEEEEEEEE
T ss_pred EEEEEECCCCHHH--HHHHHCCCCCHHHHCCCEEEEEECCCCEEEEHHHHHCCC--CCCCCCHHHHHHCCCCCEEEEEEC
T ss_conf 7899742530345--555421221001000421689841443343001343034--432120222102356523898641
Q ss_pred CCCCCEEEEEECEEEECCCCCEEEEEEECCCCCEEE--EEEEEEECCCCEEEEEEEEECCCCCC--HHHHHHHHHCCCCC
Q ss_conf 456530143200011203551467786425651244--33566513541246633442274410--01112222127775
Q gi|254781061|r 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRR--ELSIDVKGEESQFMLRGINLLSGKAH--SDLSMFLRHKVPNT 295 (428)
Q Consensus 220 ~~~~~s~~~~~~~~~~~~~S~~~~~~~~~Gg~~~R~--~i~i~L~Ge~a~~~~~g~~l~~~~q~--~D~~~~i~H~~~~t 295 (428)
..+..+. ........+++|.++...+.++.+-.+. ...+...|+++.+++....++.++.+ +.=...|.+.+..|
T Consensus 250 ~g~~~~~-~~~~~~l~g~~a~~~~~g~~~~~~~q~~d~~~~v~h~~~~t~s~~~~k~vl~d~s~~vf~G~i~i~~~A~~s 328 (435)
T 1vh4_A 250 LGGAVLR-HNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKT 328 (435)
T ss_dssp CCCSEEE-EEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTE
T ss_pred CCCCEEE-EECCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCEEEEEEEECCCCCCHHH
T ss_conf 5651111-001111440011100110245663036454322201555322200210333368626985440336663166
Q ss_pred EEEEEEEEEECC-CCEEEEECCCCC
Q ss_conf 268887300048-852787410101
Q gi|254781061|r 296 CSTSVIRNIVLE-KSTGVFQGAVHV 319 (428)
Q Consensus 296 ~S~~~~k~vl~d-~s~~vf~G~i~V 319 (428)
.+.|..++++-+ .|+..=.-.+.|
T Consensus 329 ~a~q~~~~LlLs~~A~~~s~P~LeI 353 (435)
T 1vh4_A 329 DGQMTNNNLLMGKLAEVDTKPQLEI 353 (435)
T ss_dssp EEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred HHHHHHHEEEECCCCEEEECCEEEE
T ss_conf 7676554065058841665623899