HHsearch results for GI: 254781061 and protein with PDBid: 1vh4_A
>1vh4_A SUFD protein; structural genomics, protein binding protein; 1.75A {Escherichia coli} SCOP: b.80.6.1 PDB: 2zu0_A*
Probab=100.00 E-value=0 Score=675.86 Aligned_cols=387 Identities=25% Similarity=0.377 Sum_probs=343.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC-CCCCCCCCHHHCCCCEEEEEECCCCCCCCCCC----
Q ss_conf 9999999999998283239972474258878977513576443-21111110000158159998346542000445----
Q gi|254781061|r 29 VAFRRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTNKNS-IATLQKKYKPLVADSIQLSISQQPSSSILKEK---- 103 (428)
Q Consensus 29 ~~~R~~a~~~F~~~G~lPtkK~E~WKyT~l~~l~~~~~~~~~~-~~~~~~~~~~~~~d~~~i~~~~~~~~~~l~~~---- 103 (428)
...|++||++|.++| |||+|+|+||||||++|....+....+ .............+.+.++|.||.+.+.++..
T Consensus 28 ~~~~~~~~~~f~~~G-lPt~K~E~WKyT~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivfvnG~~~~~lS~~~e~~ 106 (435)
T 1vh4_A 28 SPQAQQHLQQLLRTG-LPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRYVPALSDATEGS 106 (435)
T ss_dssp CHHHHHHHHHHHHHC-CCCTTSTTCTTCCCHHHHTSCEECCCCCCCHHHHHHHCCCCCSEEEEEETTEECGGGSCCCTTS
T ss_pred CHHHHHHHHHHHHHC-CCCCCCCCEECCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCEECHHHCCCCCCC
T ss_conf 099999999999838-8899862720597799744577655776780120112234785389999999813226775568
Q ss_pred CCCCCCHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEECCCEEEEEECCCC------CCCEEEEEEC
Q ss_conf 7541005652124201000134555445667887521387487730544770230343202232------2210121001
Q gi|254781061|r 104 NIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQCGG------QMHLRYPISF 177 (428)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~f~~LN~A~~~~g~~I~V~~~~~~~~PI~i~~~~~~~------~~~~r~~I~v 177 (428)
++.+.... .........+.++|.+||.|++++|++|+||+|.++++||+|+++.++. ..+||++|++
T Consensus 107 ~i~i~~~~-------~~~~~~~~~~~~~~~~Ln~a~~~~g~~I~V~~n~~~~~PI~I~~~~~~~~~~~~~~~~~r~~I~v 179 (435)
T 1vh4_A 107 GYEVSIND-------DRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDL 179 (435)
T ss_dssp SCEEEEES-------CCTTCCCCSSCCHHHHHHHHHCSCEEEEEECTTCCCSSCEEEEEEECCCSSSCEEEEEEEEEEEE
T ss_pred CEEEECHH-------HHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCEECCCCEEEEEEECCCCCCCCCEEEEEEEEEE
T ss_conf 72995267-------76540444301077999886534647999703400156459999612446655530346789997
Q ss_pred CCCCCEEEEEECCCCCCCCEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEECEEEECCCCCEEEEEEECCCCCEEEEE
Q ss_conf 79861355530356675520100312899648863766300245653014320001120355146778642565124433
Q gi|254781061|r 178 GMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRREL 257 (428)
Q Consensus 178 ~~ns~~~iiE~~~~~~~~~~~~n~~~ei~l~~~A~l~~~~iq~~~~~s~~~~~~~~~~~~~S~~~~~~~~~Gg~~~R~~i 257 (428)
++||+++|+|.|.+.+...+|++.+++|.+++||+|+|+++|+++.+++++...++.++++|.|+++++.+|+.++|+++
T Consensus 180 ~~ns~vtIie~~~~~~~~~~~~n~v~ei~l~enA~L~~~~iq~~~~~~~~~~~~~~~~~~~S~~~~~~~~~g~~~~r~~~ 259 (435)
T 1vh4_A 180 AEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNT 259 (435)
T ss_dssp CTTCEEEEEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCTTCEEEEEEEEEECTTCEEEEEEEECCCSEEEEEE
T ss_pred CCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEEC
T ss_conf 48985279997503786410231369999807808999998505775410002368864787369988851774147620
Q ss_pred EEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 56651354124663344227441001112222127775268887300048852787410101366410000000004661
Q gi|254781061|r 258 SIDVKGEESQFMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLF 337 (428)
Q Consensus 258 ~i~L~Ge~a~~~~~g~~l~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~~a~~t~~~q~~~~llL 337 (428)
++.|+|+||+++++|+++++++|++|+++.|+|.+|+|+|+|.+|+|++|+|++||+|+|+|.++|++|+|+|.|++|||
T Consensus 260 ~~~L~G~ga~~~~~g~~~~~~~q~~D~~~~i~H~~~~t~S~~~~k~Vl~d~s~~vf~G~i~I~~~A~~t~a~q~~~~lll 339 (435)
T 1vh4_A 260 STQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLM 339 (435)
T ss_dssp EEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEEEEEEEEEEEC
T ss_pred CCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHEECEEEE
T ss_conf 11145664304566677258986885210004237980688721023226870499630200555126666320043981
Q ss_pred CCCEEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 28717981212477138733655422123899999999946889899999999999999988589789999999999999
Q gi|254781061|r 338 SNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVEDLNDQVLQFSIEEILSSW 417 (428)
Q Consensus 338 s~~a~~~s~P~LeI~~ddV~~~Hgatvg~id~e~lfYl~sRGi~~~~A~~lli~gF~~~~i~~i~~~~~~~~~~~~i~~~ 417 (428)
|++|+++|+|+|||++|||+|+||||||+||+|||||||||||++++|++|||.||++|++++||++.+|+++.+.|++|
T Consensus 340 s~~a~~~s~P~LeI~~ddV~~sHgatvg~id~e~lfYL~SRGi~~~~A~~llv~gF~~~v~~~i~~~~l~~~v~~~i~~~ 419 (435)
T 1vh4_A 340 GKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQR 419 (435)
T ss_dssp STTCEEEEEEEEEECCSSEEEEEEEEEECCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTT
T ss_pred CCCCEEEECEEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 48834876504899539737995132467898999999876999999999999997999998699699999999999987
Q ss_pred HHHCCC
Q ss_conf 741387
Q gi|254781061|r 418 LKNNSA 423 (428)
Q Consensus 418 l~~~~~ 423 (428)
|+..+.
T Consensus 420 l~~~~~ 425 (435)
T 1vh4_A 420 LPGGAR 425 (435)
T ss_dssp STTC--
T ss_pred HHCHHH
T ss_conf 413022