HHSEARCH alignment of GI: 254781061 and SCOP domain: d1vh4a_

Alignment
>d1vh4a_ b.80.6.1 (A:) Stabilizer of iron transporter SufD {Escherichia coli [TaxId: 562]}
Probab=98.37  E-value=9.3e-05  Score=50.71  Aligned_cols=164  Identities=10%  Similarity=-0.011  Sum_probs=101.2

Q ss_pred             EEEEEECCEEECCCEEEEEECCCC---CCCEEEEEECCCCCCEEEEEECCCCCCCCEEECCCEEEEECCCCEEEEEECCC
Q ss_conf             487730544770230343202232---22101210017986135553035667552010031289964886376630024
Q gi|254781061|r  144 YKVVIPDECQLNVPLELQAIQCGG---QMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKVGEGADITWVIVLD  220 (428)
Q Consensus       144 ~~I~V~~~~~~~~PI~i~~~~~~~---~~~~r~~I~v~~ns~~~iiE~~~~~~~~~~~~n~~~ei~l~~~A~l~~~~iq~  220 (428)
                      +.|.|.+|.++.  |.-.+...+.   ..++.+.|.+++||+++.+........  ..+-..+.+.++++|.++...+..
T Consensus       165 ~~I~v~ena~v~--iiE~~~~~~~~~~~~n~~~ei~l~~nA~l~~~~iq~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~  240 (413)
T d1vh4a_         165 HHLDLAEGAEAT--VIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPL--SHHFAHNDLLLAEDATAFSHSFLL  240 (413)
T ss_dssp             EEEEECTTCEEE--EEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCTT--CEEEEEEEEEECTTCEEEEEEEEC
T ss_pred             EEEEECCCCHHH--HHHHCCCCCCCCCEECCEEEEEECCCCEEEEHHHHHHCCC--CCCCCEEEEECCCCCCEEEEECCC
T ss_conf             565305520221--1121145544100002205899526642430334442233--421220112003454146532000


Q ss_pred             CCCCEEEEEECEEEECCCCCEEEEEEECCCCCEEEE--EEEEEECCCCEEEEEEEEECCCCC--CHHHHHHHHHCCCCCE
Q ss_conf             565301432000112035514677864256512443--356651354124663344227441--0011122221277752
Q gi|254781061|r  221 QGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRE--LSIDVKGEESQFMLRGINLLSGKA--HSDLSMFLRHKVPNTC  296 (428)
Q Consensus       221 ~~~~s~~~~~~~~~~~~~S~~~~~~~~~Gg~~~R~~--i~i~L~Ge~a~~~~~g~~l~~~~q--~~D~~~~i~H~~~~t~  296 (428)
                      .+.- ..........+++|.+....+.++.+-...+  +.+...|++|.+++.-..++.++.  .+.=.+.|...+..|.
T Consensus       241 G~~~-~r~~~~~~L~G~~a~~~~~g~~~~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~~A~~t~  319 (413)
T d1vh4a_         241 GGAV-LRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTD  319 (413)
T ss_dssp             CCSE-EEEEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEE
T ss_pred             CCCH-HHCCCHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCHHHH
T ss_conf             2110-011000011200011001102346642243322232015554204134312466664048865303565522566


Q ss_pred             EEEEEEEEECC-CCEEE
Q ss_conf             68887300048-85278
Q gi|254781061|r  297 STSVIRNIVLE-KSTGV  312 (428)
Q Consensus       297 S~~~~k~vl~d-~s~~v  312 (428)
                      +.|..|+++-+ +|+..
T Consensus       320 a~q~~~~llls~~a~~~  336 (413)
T d1vh4a_         320 GQMTNNNLLMGKLAEVD  336 (413)
T ss_dssp             EEEEEEEEECSTTCEEE
T ss_pred             HHHHHHHHCCCCCCEEE
T ss_conf             57766530156774487


SCOP domain information

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Stabilizer of iron transporter SufD
family: Stabilizer of iron transporter SufD
domain: Stabilizer of iron transporter SufD
species: Escherichia coli [TaxId: 562]