RPSBLAST alignment for GI: 254781061 and conserved domain: TIGR01981

>gnl|CDD|162637 TIGR01981, sufD, FeS assembly protein SufD, group 1. This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. Length = 366
 Score =  258 bits (661), Expect = 2e-69
 Identities = 113/368 (30%), Positives = 194/368 (52%), Gaps = 10/368 (2%)

Query: 45  LPTRKIENWHYTDLKNILKVLPTNKNSIATLQKKYKPLVADSIQLSISQQPSSSILKEKN 104
           LP R+IE W YTDL+N+L      + ++    +     +  S +L          L +  
Sbjct: 1   LPPRRIEEWRYTDLENLLNESFQPRAAVPQEVQAAGLPLTKSPRLVFVDGVIVPDLSDAL 60

Query: 105 IEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVVIPDECQLNVPLELQAIQ 164
                  H E  ++    L  LS+ D    +N  L NDG  + +P   ++  P+E++ I 
Sbjct: 61  PL-----HPELLEDLLDALAVLSDEDRFLALNAALFNDGTVLYVPKGVEVEEPIEIKFIG 115

Query: 165 CGGQ---MHLRYPISFGMNSRTTVVERYTTLTNDNS--FVSSIADIKVGEGADITWVIVL 219
            GG+   +H R  I     S+ TV+ER+ T++ ++   F +S+ +I VG  A + +V V 
Sbjct: 116 VGGEKNFVHPRLLIIVEKGSKITVIERFETISLNSGKAFTNSVVEITVGANASVIFVKVQ 175

Query: 220 DQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQFMLRGINLLSGK 279
                 TH    R  + + ++L++ V+N+G  LSR    +D++GE S+  ++G+   +G 
Sbjct: 176 FFSKNSTHFSNHRAFIGRDATLRLAVVNLGGKLSRHNFDVDLEGEGSKLEVKGLAFGAGS 235

Query: 280 AHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSNARMTANTLLFSN 339
            H D+   + H  P+T S  + R I+ +++ GVF+G +H+   A+G++A      LL S+
Sbjct: 236 QHVDVRTNVVHNGPDTKSNILHRGILDDRAHGVFRGIIHIPKGAKGTDAEQLNRNLLLSD 295

Query: 340 EGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACSMLSHAFMSEIVE 399
           +     KP LEI ADDV+  HGAT+  I+ E L+YL +RGI + +A  +L   F+ EI+E
Sbjct: 296 DARADTKPILEIDADDVKASHGATVGQIDDEQLFYLRSRGIDEEEARRLLIRGFLGEIIE 355

Query: 400 DLNDQVLQ 407
           ++ D+ L+
Sbjct: 356 EIPDESLK 363