RPSBLAST alignment of GI: 254781061 and protein with PDBid: 1vh4

 Score =  174 bits (440), Expect = 4e-44
 Identities = 91/395 (23%), Positives = 162/395 (41%), Gaps = 5/395 (1%)

Query: 32  RRRLLCDFRTQGLLPTRKIENWHYTDLKNILKVLPTN-KNSIATLQKKYKPLVADSIQLS 90
            ++ L      GL PTRK ENW YT L+ ++     +    I+  Q+    L  DS++L 
Sbjct: 31  AQQHLQQLLRTGL-PTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLV 89

Query: 91  ISQ---QPSSSILKEKNIEVLPFSHIENTDENSYCLEPLSEHDTIGYINGILSNDGYKVV 147
                  P+ S   E +   +  +       ++   E           +           
Sbjct: 90  FVDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQR 149

Query: 148 IPDECQLNVPLELQAIQCGGQMHLRYPISFGMNSRTTVVERYTTLTNDNSFVSSIADIKV 207
                 L    +  A +     H R+ +     +  TV+E + +L +   F  +   I V
Sbjct: 150 PAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINV 209

Query: 208 GEGADITWVIVLDQGIEDTHLGQLRVILEKKSSLKVFVLNIGQGLSRRELSIDVKGEESQ 267
              A +  + +  +     H     ++L + ++       +G  + R   S  + GE S 
Sbjct: 210 AANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENST 269

Query: 268 FMLRGINLLSGKAHSDLSMFLRHKVPNTCSTSVIRNIVLEKSTGVFQGAVHVSSEAQGSN 327
             +  + +       D   +L H      S  + + IV +K   VF G ++V+  A  ++
Sbjct: 270 LRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTD 329

Query: 328 ARMTANTLLFSNEGSFYVKPELEIFADDVQCGHGATISDINPEHLYYLMARGISKNQACS 387
            +MT N LL         KP+LEI+ADDV+C HGAT+  I+ E ++YL +RGI++  A  
Sbjct: 330 GQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQ 389

Query: 388 MLSHAFMSEIVEDLNDQVLQFSIEEILSSWLKNNS 422
           M+ +AF +E+ E L D+ L+  +   +   L   +
Sbjct: 390 MIIYAFAAELTEALRDEGLKQQVLARIGQRLPGGA 424