HHsearch alignment for GI: 254781062 and conserved domain: COG0001
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].
Probab=99.54 E-value=2e-14 Score=110.52 Aligned_cols=323 Identities=13% Similarity=0.174 Sum_probs=185.3
Q ss_pred EEEECCCC-CC-----CCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99766888-89-----898999999999986149-866026799999999999999999998287976543346876898
Q gi|254781062|r 25 IYFDNAAS-AQ-----KPQDVIDSIMCTYSHEYA-NIHRGLHYMANAVTDKYEKARDKVRRFINASSVKEIIFTRSATES 97 (406)
Q Consensus 25 iYld~a~~-~~-----~~~~V~~a~~~~~~~~~~-n~~~~~~~~~~~~~~~~~~aR~~ia~~lga~~~~~v~ft~~~Te~ 97 (406)
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pt---e------~Ei~~A-ell~~~~p~--~e~vrfvnSGTEA 121 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPT---E------LEVELA-ELLIERVPS--IEKVRFVNSGTEA 121 (432)
T ss_pred EEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC---H------HHHHHH-HHHHHHCCC--CCEEEEECCHHHH
T ss_conf 754013057650008898799999999997267778997---7------899999-999986586--5089986064089
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC----------CCCCCC------CCCCCCCCCCCCHHHHHHHHC
Q ss_conf 7654322344432013443454011000010000122----------223222------222222222210257887510
Q gi|254781062|r 98 INLVSYGWGARHISTGDEIVLSVMEHHSNIIPWYFLR----------QRRGAS------LVWVPIDNQGFFHIDEFKNRL 161 (406)
Q Consensus 98 ~n~~~~~~~~~~~~~gd~Vi~s~~eh~s~~~~~~~~~----------~~~G~~------v~~i~~~~~g~id~~~l~~~i 161 (406)
T Consensus 122 tmsAiRlA--Ra~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~ 194 (432)
T COG0001 122 TMSAIRLA--RAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAF 194 (432)
T ss_pred HHHHHHHH--HHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECCC-----CHHHHHHHH
T ss_conf 99999999--87647975999728888871187842676755578999999973453447884579-----999999999
Q ss_pred CCC---CCCCCCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCCCCCCCCCCC----CHHHHCCCCCCCCCCC-CCC
Q ss_conf 233---443322222222333333----3210002344443101233200011100----0011001122234322-235
Q gi|254781062|r 162 TER---TKLIAITHMSNVLGTVIP----IKEICRIAHERNIPVLVDGSQGSVHNFV----DVQDIDCDWYIITGHK-LYG 229 (406)
Q Consensus 162 ~~~---t~lv~i~~~~~~tG~~~p----i~~I~~~~~~~g~~~~vD~aq~~g~~~i----d~~~~~~D~~~~S~hK-~~G 229 (406)
T Consensus 195 ~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIGG 272 (432)
T COG0001 195 EEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIGG 272 (432)
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCCCHHHHH--HHHCC
T ss_conf 8768967999954246788989898789999999999719489986221204547764201008696333222--44047
Q ss_pred CCCCCHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCC--CHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 44431000256663100121145303433202453003310000012212--0245664210123322222222222222
Q gi|254781062|r 230 PSGIGGLYSKESRLNEMDPFMGGSEMIADVTQDMVTYADLPYRFEPGTPP--ISQAIALGVALDYVEKIDRKSIFSYERE 307 (406)
Q Consensus 230 p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~--~~~~~al~~al~~~~~~g~~~i~~~~~~ 307 (406)
T Consensus 273 GlP~ga~gGr~eiM~~~~p~g--------------------~vyqaGT~sgnplamaAG~atl~~l~~~--~~~y~~l~~ 330 (432)
T COG0001 273 GLPIGAFGGRAEIMEQLAPLG--------------------PVYQAGTLSGNPLAMAAGLATLEELMTE--EGVYERLDA 330 (432)
T ss_pred CCCEEEECCHHHHHHHHCCCC--------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCHHHHHHH
T ss_conf 752011256999996327788--------------------7645677788689999999999998736--518999999
Q ss_pred CCCCCCCCCCCCC---EEEECCCCCCCCCEEEEEECC--CC---------H---HHHHHHHHHCCCEEEECCHHHHHHHH
Q ss_conf 2222222222221---013226852158679998089--99---------9---99999998789699975211278899
Q gi|254781062|r 308 LARYVRSRLKEVR---GMQLVNESLEDSPIISFRLGN--IH---------P---YDLALFLDGEGIAIRAGTHCANPLLK 370 (406)
Q Consensus 308 l~~~l~~~L~~~~---g~~i~~~~~~~~~iv~~~~~~--~~---------~---~~v~~~L~~~gI~v~~G~~ca~~~~~ 370 (406)
T Consensus 331 ~~~~L~~gl~~~~~~~g~~~~v~--~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~------- 401 (432)
T COG0001 331 LGERLAEGLRAAAERHGIPLTVN--RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF------- 401 (432)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEE--EECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCC-------
T ss_conf 99999999999999839985886--204258999558998889999863569999999999968823477555-------
Q ss_pred HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 728995799993588899999999999999999719
Q gi|254781062|r 371 FLGIDSLCRASLAMYNTYEEADKFIETLKKSIQFFQ 406 (406)
Q Consensus 371 ~~g~~~~iRiS~~~~nt~edid~~i~~l~~~i~~l~ 406 (406)
T Consensus 402 ----e-a~--flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 402 ----E-AG--FLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred ----C-CE--EEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf ----5-45--52004689999999999999999863